Query 009771
Match_columns 526
No_of_seqs 597 out of 5268
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 12:38:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009771.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009771hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 1.5E-53 5.3E-58 468.4 33.1 404 29-438 6-698 (768)
2 4eco_A Uncharacterized protein 100.0 2.7E-49 9.1E-54 425.3 27.0 387 32-432 27-578 (636)
3 4ecn_A Leucine-rich repeat pro 100.0 4.5E-48 1.6E-52 423.1 29.5 389 30-429 264-785 (876)
4 3rgz_A Protein brassinosteroid 100.0 7.6E-45 2.6E-49 399.4 21.4 358 76-441 294-725 (768)
5 3v47_A TOLL-like receptor 5B a 100.0 3.5E-41 1.2E-45 348.7 27.6 331 101-436 30-411 (455)
6 1ogq_A PGIP-2, polygalacturona 100.0 5.3E-42 1.8E-46 336.5 19.0 295 31-362 2-306 (313)
7 3vq2_A TLR4, TOLL-like recepto 100.0 7.8E-40 2.7E-44 351.0 29.7 348 76-433 32-534 (606)
8 4eco_A Uncharacterized protein 100.0 1.7E-40 5.7E-45 356.9 22.7 340 76-433 206-600 (636)
9 3t6q_A CD180 antigen; protein- 100.0 6.8E-39 2.3E-43 343.7 32.3 348 76-433 33-462 (606)
10 3t6q_A CD180 antigen; protein- 100.0 1.3E-38 4.6E-43 341.4 32.4 360 77-438 58-518 (606)
11 3vq2_A TLR4, TOLL-like recepto 100.0 4.1E-39 1.4E-43 345.4 25.4 326 101-435 32-512 (606)
12 2z81_A CD282 antigen, TOLL-lik 100.0 2.4E-39 8.1E-44 343.1 23.0 169 64-240 3-184 (549)
13 4ecn_A Leucine-rich repeat pro 100.0 5E-39 1.7E-43 351.7 25.0 325 94-432 441-818 (876)
14 3v47_A TOLL-like receptor 5B a 100.0 5.6E-39 1.9E-43 332.2 23.9 346 61-413 4-412 (455)
15 2z7x_B TOLL-like receptor 1, v 100.0 3.3E-38 1.1E-42 332.0 27.9 338 76-433 21-457 (520)
16 2z63_A TOLL-like receptor 4, v 100.0 2.1E-38 7.2E-43 337.4 26.0 351 76-435 28-509 (570)
17 3j0a_A TOLL-like receptor 5; m 100.0 1.4E-37 4.7E-42 345.2 31.6 361 64-432 13-463 (844)
18 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 2.2E-37 7.6E-42 328.7 28.6 340 76-434 52-511 (562)
19 1ziw_A TOLL-like receptor 3; i 100.0 4E-37 1.4E-41 334.4 30.8 250 76-333 25-305 (680)
20 1ziw_A TOLL-like receptor 3; i 100.0 9.1E-37 3.1E-41 331.6 30.3 337 96-432 92-516 (680)
21 2id5_A Lingo-1, leucine rich r 100.0 4E-37 1.4E-41 320.3 25.6 305 101-412 32-336 (477)
22 3j0a_A TOLL-like receptor 5; m 100.0 2.2E-37 7.5E-42 343.5 24.8 358 76-433 48-517 (844)
23 2id5_A Lingo-1, leucine rich r 100.0 4.1E-37 1.4E-41 320.1 24.9 319 106-434 16-334 (477)
24 2z7x_B TOLL-like receptor 1, v 100.0 6.2E-37 2.1E-41 322.3 25.5 333 80-433 4-434 (520)
25 2z63_A TOLL-like receptor 4, v 100.0 2.3E-36 8E-41 321.6 25.8 326 101-435 28-485 (570)
26 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 6.6E-36 2.3E-40 317.4 27.0 335 79-433 34-486 (562)
27 4g8a_A TOLL-like receptor 4; l 100.0 2.4E-35 8.2E-40 317.6 31.4 378 50-435 13-582 (635)
28 3oja_B Anopheles plasmodium-re 100.0 8.8E-36 3E-40 318.3 26.7 312 99-435 49-360 (597)
29 3o6n_A APL1; leucine-rich repe 100.0 1.2E-35 4.1E-40 300.9 25.7 314 98-436 42-355 (390)
30 1o6v_A Internalin A; bacterial 100.0 7.2E-35 2.5E-39 302.1 31.0 328 77-434 47-389 (466)
31 2z81_A CD282 antigen, TOLL-lik 100.0 5.3E-36 1.8E-40 317.4 20.9 318 101-433 26-464 (549)
32 4fmz_A Internalin; leucine ric 100.0 2.6E-34 8.9E-39 286.4 30.2 307 97-433 40-346 (347)
33 3bz5_A Internalin-J, INLJ; leu 100.0 8E-34 2.7E-38 292.4 27.3 297 76-410 42-353 (457)
34 3bz5_A Internalin-J, INLJ; leu 100.0 1.6E-33 5.6E-38 290.1 27.2 303 95-434 36-353 (457)
35 4fmz_A Internalin; leucine ric 100.0 6.5E-33 2.2E-37 276.2 29.7 303 76-409 44-346 (347)
36 4fcg_A Uncharacterized protein 100.0 5.9E-35 2E-39 288.2 12.8 284 31-336 23-313 (328)
37 1o6v_A Internalin A; bacterial 100.0 1.3E-32 4.4E-37 285.2 30.2 306 99-435 44-368 (466)
38 1ogq_A PGIP-2, polygalacturona 100.0 7.2E-35 2.5E-39 285.8 12.3 249 125-383 50-302 (313)
39 1xku_A Decorin; proteoglycan, 100.0 1.6E-32 5.4E-37 271.5 27.3 288 102-406 32-329 (330)
40 2ft3_A Biglycan; proteoglycan, 100.0 7.2E-33 2.5E-37 274.1 24.6 222 101-337 54-277 (332)
41 4g8a_A TOLL-like receptor 4; l 100.0 1.4E-32 4.9E-37 295.9 26.8 329 101-436 52-558 (635)
42 3oja_B Anopheles plasmodium-re 100.0 6.2E-33 2.1E-37 296.2 23.0 294 94-412 68-361 (597)
43 3o6n_A APL1; leucine-rich repe 100.0 1E-32 3.4E-37 279.4 22.8 309 78-412 47-355 (390)
44 2ft3_A Biglycan; proteoglycan, 100.0 2.8E-32 9.5E-37 269.9 23.3 289 100-406 32-330 (332)
45 1xku_A Decorin; proteoglycan, 100.0 1.3E-31 4.3E-36 265.0 25.2 291 124-431 30-330 (330)
46 1jl5_A Outer protein YOPM; leu 100.0 1.4E-30 4.8E-35 267.9 28.6 288 101-433 91-409 (454)
47 1jl5_A Outer protein YOPM; leu 100.0 3.7E-31 1.3E-35 272.3 18.6 227 76-337 11-250 (454)
48 1z7x_W Ribonuclease inhibitor; 100.0 1.3E-34 4.3E-39 300.0 -7.6 356 77-435 4-413 (461)
49 2z80_A TOLL-like receptor 2, v 100.0 1.2E-30 4E-35 260.5 17.1 285 61-411 26-316 (353)
50 4fcg_A Uncharacterized protein 100.0 1.2E-29 4E-34 250.2 19.2 236 123-385 79-314 (328)
51 2z66_A Variable lymphocyte rec 100.0 2.3E-30 7.9E-35 253.1 13.9 253 65-339 7-263 (306)
52 1z7x_W Ribonuclease inhibitor; 100.0 1.9E-32 6.4E-37 283.7 -2.9 358 77-437 29-444 (461)
53 2z66_A Variable lymphocyte rec 100.0 5.2E-30 1.8E-34 250.6 13.9 280 105-419 11-297 (306)
54 2z80_A TOLL-like receptor 2, v 100.0 1.8E-29 6.3E-34 251.9 15.3 210 202-436 98-317 (353)
55 1ozn_A Reticulon 4 receptor; N 100.0 1.3E-28 4.4E-33 238.1 15.7 207 100-313 31-238 (285)
56 3zyj_A Leucine-rich repeat-con 100.0 8.5E-28 2.9E-32 247.1 21.5 227 101-336 64-291 (440)
57 3zyi_A Leucine-rich repeat-con 100.0 1.5E-27 5.1E-32 246.1 23.3 227 101-336 75-302 (452)
58 1ozn_A Reticulon 4 receptor; N 100.0 6.1E-28 2.1E-32 233.4 17.1 224 128-385 14-238 (285)
59 1wwl_A Monocyte differentiatio 100.0 7E-30 2.4E-34 250.3 3.5 256 97-386 39-310 (312)
60 3zyj_A Leucine-rich repeat-con 100.0 2.9E-27 1E-31 243.0 22.9 235 116-361 57-292 (440)
61 1wwl_A Monocyte differentiatio 100.0 6.1E-30 2.1E-34 250.7 2.0 223 103-338 65-310 (312)
62 3zyi_A Leucine-rich repeat-con 99.9 7.5E-27 2.6E-31 240.9 22.4 249 150-410 55-304 (452)
63 3g06_A SSPH2 (leucine-rich rep 99.9 2.9E-26 1E-30 243.1 26.9 281 61-393 18-305 (622)
64 3o53_A Protein LRIM1, AGAP0063 99.9 4.8E-29 1.6E-33 244.9 3.9 265 104-413 13-280 (317)
65 3o53_A Protein LRIM1, AGAP0063 99.9 2.5E-28 8.6E-33 239.8 6.4 248 97-365 30-280 (317)
66 3g06_A SSPH2 (leucine-rich rep 99.9 1.6E-25 5.6E-30 237.3 27.8 268 101-419 40-307 (622)
67 3oja_A Leucine-rich immune mol 99.9 9.4E-28 3.2E-32 249.2 9.6 237 99-356 32-270 (487)
68 2o6q_A Variable lymphocyte rec 99.9 1.3E-25 4.3E-30 215.2 21.2 218 62-314 2-219 (270)
69 3oja_A Leucine-rich immune mol 99.9 7.1E-28 2.4E-32 250.2 5.4 235 125-404 34-270 (487)
70 3ogk_B Coronatine-insensitive 99.9 1E-27 3.4E-32 256.1 -0.4 331 99-435 162-528 (592)
71 2z62_A TOLL-like receptor 4, v 99.9 1.1E-24 3.6E-29 209.5 19.0 148 101-255 28-176 (276)
72 2z62_A TOLL-like receptor 4, v 99.9 1.7E-24 5.9E-29 208.1 19.2 225 105-361 11-237 (276)
73 3rfs_A Internalin B, repeat mo 99.9 2.5E-24 8.4E-29 206.5 16.8 209 97-323 37-245 (272)
74 3rfs_A Internalin B, repeat mo 99.9 2.8E-24 9.5E-29 206.1 15.1 164 201-371 82-245 (272)
75 2ca6_A RAN GTPase-activating p 99.9 7.5E-27 2.6E-31 235.8 -3.4 234 169-413 56-320 (386)
76 2o6q_A Variable lymphocyte rec 99.9 3.5E-23 1.2E-27 198.2 22.2 204 126-339 17-220 (270)
77 2ast_B S-phase kinase-associat 99.9 4.1E-26 1.4E-30 225.9 0.2 211 64-286 36-257 (336)
78 1p9a_G Platelet glycoprotein I 99.9 3.4E-23 1.1E-27 200.2 19.8 203 97-337 6-208 (290)
79 3ogk_B Coronatine-insensitive 99.9 1.7E-25 5.9E-30 238.8 3.3 324 97-429 188-547 (592)
80 1p9a_G Platelet glycoprotein I 99.9 4.7E-23 1.6E-27 199.2 19.7 204 121-362 6-209 (290)
81 2ca6_A RAN GTPase-activating p 99.9 8E-26 2.7E-30 228.3 -0.0 252 165-436 24-319 (386)
82 3m19_A Variable lymphocyte rec 99.9 4.5E-23 1.6E-27 195.2 18.0 158 126-290 36-193 (251)
83 4glp_A Monocyte differentiatio 99.9 1.4E-23 4.7E-28 205.3 13.8 224 101-337 64-307 (310)
84 2ast_B S-phase kinase-associat 99.9 5.8E-25 2E-29 217.6 4.0 255 127-417 49-314 (336)
85 3goz_A Leucine-rich repeat-con 99.9 6.2E-25 2.1E-29 219.7 4.1 264 105-391 2-303 (362)
86 3goz_A Leucine-rich repeat-con 99.9 4.6E-25 1.6E-29 220.6 1.6 265 129-416 2-304 (362)
87 4glp_A Monocyte differentiatio 99.9 2E-23 6.9E-28 204.1 12.8 204 100-314 90-308 (310)
88 2p1m_B Transport inhibitor res 99.9 1.1E-25 3.8E-30 240.4 -4.8 136 299-435 371-521 (594)
89 2xwt_C Thyrotropin receptor; s 99.9 3.5E-22 1.2E-26 187.6 14.5 86 102-187 32-119 (239)
90 2o6s_A Variable lymphocyte rec 99.9 7.7E-22 2.6E-26 181.1 16.4 185 64-277 6-190 (208)
91 1h6u_A Internalin H; cell adhe 99.9 7.4E-22 2.5E-26 192.6 17.0 194 97-313 37-230 (308)
92 2p1m_B Transport inhibitor res 99.9 1.7E-24 5.9E-29 231.1 -4.1 332 98-435 102-496 (594)
93 3m19_A Variable lymphocyte rec 99.9 4.1E-21 1.4E-25 181.7 18.7 178 127-338 16-193 (251)
94 1h6u_A Internalin H; cell adhe 99.9 1.7E-21 5.9E-26 190.0 16.1 205 107-336 25-229 (308)
95 2xwt_C Thyrotropin receptor; s 99.9 6.1E-22 2.1E-26 186.0 12.3 198 125-335 31-237 (239)
96 3cvr_A Invasion plasmid antige 99.9 1.2E-21 4E-26 205.3 11.9 182 102-318 60-248 (571)
97 2o6s_A Variable lymphocyte rec 99.8 1.6E-20 5.4E-25 172.4 15.6 181 104-301 10-190 (208)
98 3cvr_A Invasion plasmid antige 99.8 5.6E-20 1.9E-24 192.6 17.1 134 126-289 60-193 (571)
99 4ay9_X Follicle-stimulating ho 99.8 4.5E-20 1.5E-24 183.4 15.3 124 104-237 12-137 (350)
100 4ay9_X Follicle-stimulating ho 99.8 1.2E-19 4.2E-24 180.3 17.7 202 65-289 9-215 (350)
101 3e6j_A Variable lymphocyte rec 99.8 8.3E-20 2.8E-24 170.1 15.0 161 61-244 15-175 (229)
102 1m9s_A Internalin B; cell inva 99.8 3.7E-19 1.3E-23 188.4 15.6 171 123-314 41-211 (605)
103 1h6t_A Internalin B; cell adhe 99.8 7.6E-19 2.6E-23 169.8 14.7 171 123-314 44-214 (291)
104 1h6t_A Internalin B; cell adhe 99.8 9E-19 3.1E-23 169.2 14.4 173 97-290 42-214 (291)
105 1m9s_A Internalin B; cell inva 99.8 6.5E-19 2.2E-23 186.5 13.3 174 97-291 39-212 (605)
106 2v9t_B SLIT homolog 2 protein 99.8 3E-18 1E-22 158.4 15.1 134 101-241 32-165 (220)
107 2v9t_B SLIT homolog 2 protein 99.8 1.8E-18 6.2E-23 159.9 13.5 151 106-266 16-166 (220)
108 2v70_A SLIT-2, SLIT homolog 2 99.8 2.6E-18 8.8E-23 158.9 14.2 135 102-243 33-168 (220)
109 1dce_A Protein (RAB geranylger 99.8 1.2E-20 4.1E-25 198.6 -2.9 204 201-427 346-567 (567)
110 4b8c_D Glucose-repressible alc 99.8 1.4E-19 4.8E-24 196.3 5.4 231 62-313 160-404 (727)
111 3e6j_A Variable lymphocyte rec 99.8 9.9E-18 3.4E-22 156.0 16.8 151 105-266 23-173 (229)
112 2xot_A Amphoterin-induced prot 99.8 3.3E-18 1.1E-22 170.7 13.5 158 101-265 39-202 (361)
113 4ezg_A Putative uncharacterize 99.8 4.1E-18 1.4E-22 154.7 11.9 153 99-289 42-194 (197)
114 2xot_A Amphoterin-induced prot 99.8 6.5E-18 2.2E-22 168.5 14.2 177 105-291 22-204 (361)
115 2v70_A SLIT-2, SLIT homolog 2 99.8 1.1E-17 3.7E-22 154.7 14.7 132 278-409 34-166 (220)
116 1dce_A Protein (RAB geranylger 99.7 1.1E-20 3.8E-25 198.8 -6.4 166 216-403 397-567 (567)
117 4ezg_A Putative uncharacterize 99.7 1E-17 3.5E-22 152.1 13.5 155 146-314 41-195 (197)
118 4b8c_D Glucose-repressible alc 99.7 7.9E-19 2.7E-23 190.4 4.0 218 101-337 173-404 (727)
119 1xeu_A Internalin C; cellular 99.7 8.1E-18 2.8E-22 160.0 7.7 168 100-289 18-185 (263)
120 1xeu_A Internalin C; cellular 99.7 2.3E-17 8E-22 156.8 10.3 171 226-411 17-187 (263)
121 2ell_A Acidic leucine-rich nuc 99.7 1.7E-16 5.7E-21 140.1 11.2 134 100-241 23-160 (168)
122 1w8a_A SLIT protein; signaling 99.7 3.6E-16 1.2E-20 141.2 13.0 112 102-220 30-142 (192)
123 2je0_A Acidic leucine-rich nuc 99.7 1.5E-16 5.3E-21 137.3 9.3 129 100-236 16-148 (149)
124 2ell_A Acidic leucine-rich nuc 99.6 7E-16 2.4E-20 136.1 11.5 134 123-265 22-160 (168)
125 2je0_A Acidic leucine-rich nuc 99.6 3.5E-16 1.2E-20 135.0 9.1 128 124-260 16-148 (149)
126 3sb4_A Hypothetical leucine ri 99.6 9.2E-17 3.2E-21 158.1 4.4 102 323-426 225-327 (329)
127 2o6r_A Variable lymphocyte rec 99.6 2.8E-15 9.5E-20 133.4 13.6 136 64-221 6-141 (177)
128 1w8a_A SLIT protein; signaling 99.6 2.7E-15 9.3E-20 135.4 13.5 130 255-387 11-141 (192)
129 2o6r_A Variable lymphocyte rec 99.6 1.3E-14 4.4E-19 129.1 14.2 133 103-245 9-141 (177)
130 2wfh_A SLIT homolog 2 protein 99.6 1.1E-14 3.8E-19 131.3 13.6 109 101-217 31-139 (193)
131 3sb4_A Hypothetical leucine ri 99.6 4.4E-16 1.5E-20 153.2 4.6 284 100-403 24-328 (329)
132 2wfh_A SLIT homolog 2 protein 99.6 1.8E-14 6.3E-19 129.9 12.4 128 104-242 13-140 (193)
133 1a9n_A U2A', U2A'; complex (nu 99.5 1.3E-14 4.5E-19 128.9 9.0 135 95-240 13-152 (176)
134 1ds9_A Outer arm dynein; leuci 99.5 3.2E-16 1.1E-20 142.3 -4.4 87 224-313 14-106 (198)
135 1ds9_A Outer arm dynein; leuci 99.5 3.8E-16 1.3E-20 141.8 -4.1 148 250-402 16-180 (198)
136 1a9n_A U2A', U2A'; complex (nu 99.5 5.6E-14 1.9E-18 124.8 9.4 132 120-264 14-152 (176)
137 4fdw_A Leucine rich hypothetic 99.5 1.4E-12 4.9E-17 131.1 20.2 264 100-407 112-381 (401)
138 4fdw_A Leucine rich hypothetic 99.5 2.4E-12 8.1E-17 129.5 19.7 225 94-337 129-358 (401)
139 3g39_A Variable lymphocyte rec 99.4 1.3E-12 4.3E-17 115.2 12.9 104 105-218 13-116 (170)
140 3g39_A Variable lymphocyte rec 99.4 7.4E-13 2.5E-17 116.7 10.3 91 100-190 29-119 (170)
141 4fs7_A Uncharacterized protein 99.4 1.5E-11 5.3E-16 123.8 20.7 314 92-429 62-375 (394)
142 2r9u_A Variable lymphocyte rec 99.4 2.5E-12 8.5E-17 113.7 12.5 105 104-218 15-119 (174)
143 2r9u_A Variable lymphocyte rec 99.4 3.9E-12 1.3E-16 112.5 11.7 107 127-243 14-120 (174)
144 2ifg_A High affinity nerve gro 99.3 3.8E-12 1.3E-16 125.9 9.5 108 65-186 8-116 (347)
145 4fs7_A Uncharacterized protein 99.3 2.4E-10 8.3E-15 115.0 21.7 323 76-425 71-393 (394)
146 3un9_A NLR family member X1; l 99.3 8.9E-14 3.1E-18 138.5 -4.3 166 252-417 72-260 (372)
147 3un9_A NLR family member X1; l 99.2 5.8E-13 2E-17 132.7 -0.3 163 275-437 71-256 (372)
148 2ifg_A High affinity nerve gro 99.2 6.3E-11 2.1E-15 117.1 11.9 105 105-219 12-118 (347)
149 4gt6_A Cell surface protein; l 99.1 6.8E-09 2.3E-13 104.4 22.3 318 92-431 54-389 (394)
150 4gt6_A Cell surface protein; l 99.0 1.7E-08 5.8E-13 101.4 19.4 308 78-408 66-390 (394)
151 2ra8_A Uncharacterized protein 99.0 7.5E-10 2.6E-14 109.3 7.4 165 243-431 163-341 (362)
152 2ra8_A Uncharacterized protein 98.9 4.7E-10 1.6E-14 110.8 4.8 82 97-181 135-227 (362)
153 4gt4_A Tyrosine-protein kinase 98.9 5E-11 1.7E-15 115.1 -4.1 84 431-526 213-298 (308)
154 3omv_A RAF proto-oncogene seri 98.8 2.4E-10 8.2E-15 110.0 -2.3 90 431-526 200-292 (307)
155 4aoj_A High affinity nerve gro 98.8 2.1E-10 7.2E-15 111.8 -3.4 84 431-526 226-311 (329)
156 3rw6_A Nuclear RNA export fact 98.7 1.3E-10 4.4E-15 109.0 -6.2 82 146-234 167-257 (267)
157 4asz_A BDNF/NT-3 growth factor 98.7 2.9E-10 9.9E-15 109.3 -4.2 83 431-525 196-280 (299)
158 3hmm_A TGF-beta receptor type- 98.7 1E-09 3.4E-14 106.1 -0.6 95 432-526 179-289 (303)
159 4h09_A Hypothetical leucine ri 98.7 1.5E-06 5E-11 86.7 20.9 128 273-404 214-341 (379)
160 4h09_A Hypothetical leucine ri 98.6 2E-06 6.8E-11 85.7 20.6 298 77-396 47-356 (379)
161 4ase_A Vascular endothelial gr 98.6 1.2E-09 4.2E-14 107.3 -3.4 84 431-526 253-339 (353)
162 3uim_A Brassinosteroid insensi 98.5 9.4E-09 3.2E-13 100.4 0.1 92 432-526 202-303 (326)
163 1io0_A Tropomodulin; LRR prote 98.5 1.6E-08 5.3E-13 90.1 0.3 66 97-162 32-106 (185)
164 1io0_A Tropomodulin; LRR prote 98.5 4.8E-08 1.6E-12 86.9 2.4 89 346-434 63-165 (185)
165 2qkw_B Protein kinase; three-h 98.4 1.9E-08 6.4E-13 98.0 -0.8 93 431-526 207-307 (321)
166 3rw6_A Nuclear RNA export fact 98.4 2.3E-07 7.8E-12 86.9 4.4 113 97-211 137-258 (267)
167 3fpq_A Serine/threonine-protei 98.3 3.8E-08 1.3E-12 93.9 -2.0 83 432-525 197-280 (290)
168 3gxj_A TGF-beta receptor type- 98.2 2.5E-07 8.7E-12 88.9 1.5 95 432-526 179-289 (303)
169 3q4u_A Activin receptor type-1 98.1 1.6E-07 5.3E-12 90.4 -2.0 95 432-526 184-294 (301)
170 3poz_A Epidermal growth factor 98.1 1.3E-07 4.6E-12 92.2 -2.7 85 431-526 185-270 (327)
171 3q60_A ROP5B; pseudokinase, tr 98.1 6.6E-07 2.2E-11 89.0 1.9 92 432-526 258-351 (371)
172 4g3f_A NF-kappa-beta-inducing 98.1 2.1E-07 7.2E-12 90.4 -1.9 84 432-525 223-307 (336)
173 3uzp_A CKI-delta, CKID, casein 98.0 1.2E-07 4.2E-12 90.9 -4.7 91 432-526 182-272 (296)
174 3kn6_A Ribosomal protein S6 ki 98.0 4.2E-07 1.4E-11 88.6 -1.1 94 432-526 176-269 (325)
175 3e4g_A ATP synthase subunit S, 98.0 3.1E-06 1.1E-10 73.5 4.3 83 349-431 62-150 (176)
176 2nru_A Interleukin-1 receptor- 98.0 9E-07 3.1E-11 85.3 0.9 90 432-526 202-298 (307)
177 3lb7_A RAF proto-oncogene seri 98.0 2.5E-07 8.7E-12 89.4 -3.0 89 432-526 201-292 (307)
178 4b9d_A Serine/threonine-protei 98.0 1.6E-07 5.5E-12 91.7 -4.5 84 431-525 191-274 (350)
179 2qol_A Ephrin receptor; recept 98.0 1.8E-07 6E-12 93.2 -4.8 85 431-526 216-301 (373)
180 3dbq_A Dual specificity protei 98.0 5.2E-07 1.8E-11 88.7 -1.5 78 440-526 195-272 (343)
181 4hgt_A Casein kinase I isoform 98.0 1.4E-07 4.7E-12 90.5 -5.5 91 432-526 182-272 (296)
182 3soc_A Activin receptor type-2 98.0 4.1E-07 1.4E-11 88.5 -2.2 95 432-526 200-310 (322)
183 1qcf_A Haematopoetic cell kina 98.0 2.3E-07 8E-12 94.9 -4.7 83 432-525 352-435 (454)
184 4fih_A Serine/threonine-protei 98.0 7.2E-07 2.5E-11 86.9 -1.0 86 432-526 237-322 (346)
185 2eva_A TAK1 kinase - TAB1 chim 97.9 4.4E-07 1.5E-11 87.6 -2.9 87 431-526 169-255 (307)
186 3aln_A Dual specificity mitoge 97.9 7.2E-07 2.5E-11 86.9 -1.4 79 439-526 203-284 (327)
187 3ugc_A Tyrosine-protein kinase 97.9 2.1E-07 7.2E-12 89.3 -5.2 92 432-526 184-283 (295)
188 1csn_A Casein kinase-1; phosph 97.9 1.2E-07 4.2E-12 90.9 -6.9 90 432-525 185-274 (298)
189 2zmd_A Dual specificity protei 97.9 8E-07 2.7E-11 89.0 -1.3 77 441-526 243-319 (390)
190 3cbl_A C-FES, proto-oncogene t 97.9 3E-07 1E-11 91.6 -4.4 85 431-526 281-366 (377)
191 3mdy_A Bone morphogenetic prot 97.9 1.1E-06 3.7E-11 85.9 -0.6 95 432-526 213-323 (337)
192 3og7_A AKAP9-BRAF fusion prote 97.9 4.3E-07 1.5E-11 86.8 -3.5 88 432-526 189-280 (289)
193 3kul_A Ephrin type-A receptor 97.9 3.4E-07 1.2E-11 89.2 -4.3 85 431-526 220-305 (325)
194 3cok_A Serine/threonine-protei 97.9 1.1E-06 3.7E-11 83.5 -0.8 83 432-526 179-261 (278)
195 2ozo_A Tyrosine-protein kinase 97.9 6.3E-07 2.2E-11 95.2 -2.9 84 431-525 505-589 (613)
196 3e4g_A ATP synthase subunit S, 97.9 6.1E-06 2.1E-10 71.6 3.8 83 325-407 62-150 (176)
197 2psq_A Fibroblast growth facto 97.9 5.8E-07 2E-11 89.3 -3.1 84 432-526 272-356 (370)
198 3cek_A Dual specificity protei 97.9 1.2E-06 4E-11 84.8 -1.0 78 440-526 214-291 (313)
199 1k9a_A Carboxyl-terminal SRC k 97.9 5.5E-07 1.9E-11 92.0 -3.5 84 431-525 352-436 (450)
200 2c30_A Serine/threonine-protei 97.9 9.1E-07 3.1E-11 86.0 -1.8 86 432-526 208-293 (321)
201 3s95_A LIMK-1, LIM domain kina 97.9 9.3E-07 3.2E-11 85.4 -1.7 85 432-525 189-273 (310)
202 3kk8_A Calcium/calmodulin depe 97.9 1.1E-06 3.8E-11 83.6 -1.4 87 432-526 174-260 (284)
203 3dtc_A Mitogen-activated prote 97.9 4.5E-07 1.5E-11 85.7 -4.1 85 432-526 181-265 (271)
204 3op5_A Serine/threonine-protei 97.9 4.4E-07 1.5E-11 90.0 -4.4 87 432-525 228-320 (364)
205 3fxz_A Serine/threonine-protei 97.9 1E-06 3.4E-11 84.7 -1.8 86 432-526 183-268 (297)
206 1opk_A P150, C-ABL, proto-onco 97.9 5.9E-07 2E-11 92.9 -3.7 84 432-526 386-470 (495)
207 1fmk_A C-SRC, P60-SRC, tyrosin 97.9 5.3E-07 1.8E-11 92.2 -4.0 83 432-525 348-431 (452)
208 3l9p_A Anaplastic lymphoma kin 97.9 5.5E-07 1.9E-11 89.4 -4.0 84 432-526 253-337 (367)
209 3vhe_A Vascular endothelial gr 97.9 7.1E-07 2.4E-11 88.2 -3.4 86 431-526 261-347 (359)
210 3fme_A Dual specificity mitoge 97.8 1.2E-06 4.1E-11 83.6 -1.8 86 432-526 176-265 (290)
211 2v62_A Serine/threonine-protei 97.8 5.1E-07 1.7E-11 88.8 -4.6 92 432-526 227-320 (345)
212 1b6c_B TGF-B superfamily recep 97.8 1.1E-06 3.9E-11 86.0 -2.1 85 442-526 234-328 (342)
213 1mqb_A Ephrin type-A receptor 97.8 8.3E-07 2.8E-11 86.8 -3.2 83 432-526 217-301 (333)
214 3lm5_A Serine/threonine-protei 97.8 1.1E-06 3.7E-11 85.7 -2.4 87 432-526 200-286 (327)
215 3tt0_A Basic fibroblast growth 97.8 5.7E-07 2E-11 89.8 -4.4 84 432-526 260-344 (382)
216 3qup_A Tyrosine-protein kinase 97.8 8.2E-07 2.8E-11 86.3 -3.3 83 432-525 206-289 (323)
217 3kex_A Receptor tyrosine-prote 97.8 4.6E-07 1.6E-11 88.3 -5.2 83 431-526 183-268 (325)
218 2w4o_A Calcium/calmodulin-depe 97.8 9.5E-07 3.3E-11 87.0 -3.0 87 432-525 217-303 (349)
219 3hko_A Calcium/calmodulin-depe 97.8 1.4E-06 4.9E-11 85.4 -1.8 87 432-526 241-329 (345)
220 3byv_A Rhoptry kinase; malaria 97.8 7.2E-07 2.5E-11 88.9 -4.1 79 432-526 269-358 (377)
221 1xbb_A Tyrosine-protein kinase 97.8 8.3E-07 2.8E-11 84.9 -3.5 84 432-526 187-271 (291)
222 3brb_A Proto-oncogene tyrosine 97.8 9.9E-07 3.4E-11 85.3 -3.1 84 432-526 216-300 (313)
223 3an0_A Dual specificity mitoge 97.8 1.7E-06 5.9E-11 84.7 -1.4 86 432-526 220-309 (340)
224 4f0f_A Serine/threonine-protei 97.8 8.7E-07 3E-11 84.5 -3.5 86 432-526 193-281 (287)
225 1byg_A CSK, protein (C-termina 97.8 1.1E-06 3.6E-11 83.5 -2.9 85 431-526 180-265 (278)
226 3g2f_A Bone morphogenetic prot 97.8 2E-06 6.7E-11 84.1 -1.2 86 440-526 210-310 (336)
227 1q8y_A SR protein kinase; tran 97.8 3.7E-06 1.3E-10 83.4 0.8 35 432-466 202-236 (373)
228 3lzb_A Epidermal growth factor 97.8 9.3E-07 3.2E-11 86.2 -3.5 84 432-526 186-270 (327)
229 2w5a_A Serine/threonine-protei 97.8 6.4E-07 2.2E-11 85.0 -4.7 84 432-526 183-266 (279)
230 3cc6_A Protein tyrosine kinase 97.8 7.9E-07 2.7E-11 84.6 -4.2 85 431-526 180-265 (281)
231 3dzo_A Rhoptry kinase domain; 97.8 3.6E-06 1.2E-10 84.9 0.5 79 432-526 274-362 (413)
232 3lxp_A Non-receptor tyrosine-p 97.8 7.1E-07 2.4E-11 86.6 -4.6 92 432-526 204-302 (318)
233 1mp8_A Focal adhesion kinase 1 97.8 1E-06 3.6E-11 83.7 -3.4 83 432-525 184-267 (281)
234 1u59_A Tyrosine-protein kinase 97.8 8.8E-07 3E-11 84.5 -4.0 84 432-526 180-264 (287)
235 3c1x_A Hepatocyte growth facto 97.8 1E-06 3.5E-11 87.6 -3.8 83 432-526 263-347 (373)
236 3p86_A Serine/threonine-protei 97.8 1.2E-06 4.2E-11 84.6 -3.2 83 432-526 206-290 (309)
237 2ivs_A Proto-oncogene tyrosine 97.8 1E-06 3.6E-11 85.1 -3.7 84 432-526 219-303 (314)
238 1rjb_A FL cytokine receptor; k 97.8 1.4E-06 4.6E-11 85.6 -2.9 86 431-526 240-326 (344)
239 4fie_A Serine/threonine-protei 97.8 2.1E-06 7.2E-11 85.9 -1.5 86 432-526 314-399 (423)
240 4hcu_A Tyrosine-protein kinase 97.8 8.6E-07 2.9E-11 83.7 -4.2 84 432-526 174-258 (269)
241 2i1m_A Macrophage colony-stimu 97.8 1.1E-06 3.7E-11 85.8 -3.6 85 432-526 233-318 (333)
242 3sxs_A Cytoplasmic tyrosine-pr 97.8 9.7E-07 3.3E-11 83.2 -3.9 83 432-526 172-256 (268)
243 2yex_A Serine/threonine-protei 97.8 5E-06 1.7E-10 78.6 1.0 86 432-526 174-260 (276)
244 4fl3_A Tyrosine-protein kinase 97.8 1.4E-06 4.8E-11 92.8 -3.2 85 431-526 538-623 (635)
245 1tki_A Titin; serine kinase, m 97.8 8.8E-07 3E-11 86.2 -4.4 87 432-526 170-256 (321)
246 2jii_A Serine/threonine-protei 97.8 5.8E-07 2E-11 88.6 -5.7 89 432-526 235-328 (352)
247 3p1a_A MYT1 kinase, membrane-a 97.8 1.8E-06 6.2E-11 83.5 -2.1 81 432-526 223-303 (311)
248 3lxl_A Tyrosine-protein kinase 97.8 4.3E-07 1.5E-11 88.5 -6.8 92 432-526 197-295 (327)
249 3bhy_A Death-associated protei 97.8 1.2E-06 3.9E-11 83.4 -3.6 87 432-526 178-264 (283)
250 1t4h_A Serine/threonine-protei 97.8 2E-06 6.7E-11 82.2 -2.0 85 432-526 197-281 (290)
251 2wqm_A Serine/threonine-protei 97.7 1.4E-06 4.6E-11 84.2 -3.3 86 432-526 203-289 (310)
252 3llt_A Serine/threonine kinase 97.7 2.6E-06 8.9E-11 84.1 -1.3 35 432-466 226-260 (360)
253 1luf_A Muscle-specific tyrosin 97.7 1E-06 3.4E-11 86.4 -4.3 84 432-526 243-327 (343)
254 1t46_A HOMO sapiens V-KIT hard 97.7 1.3E-06 4.4E-11 84.4 -3.6 85 432-526 214-299 (313)
255 3kmu_A ILK, integrin-linked ki 97.7 2E-06 6.7E-11 81.1 -2.2 85 432-526 175-262 (271)
256 3t9t_A Tyrosine-protein kinase 97.7 1.2E-06 3.9E-11 82.6 -4.0 83 432-526 172-256 (267)
257 2h8h_A Proto-oncogene tyrosine 97.7 1.3E-06 4.3E-11 91.4 -4.1 83 432-525 431-514 (535)
258 3ll6_A Cyclin G-associated kin 97.7 2.1E-06 7.3E-11 83.7 -2.3 80 433-526 218-300 (337)
259 3sv0_A Casein kinase I-like; t 97.7 5.9E-07 2E-11 92.3 -6.6 90 432-525 180-269 (483)
260 1z57_A Dual specificity protei 97.7 3.4E-06 1.2E-10 82.2 -0.8 35 432-466 201-235 (339)
261 2dyl_A Dual specificity mitoge 97.7 2.2E-06 7.4E-11 83.0 -2.3 84 432-526 191-282 (318)
262 2rku_A Serine/threonine-protei 97.7 2.4E-06 8.2E-11 81.7 -2.0 83 432-526 182-264 (294)
263 2yfx_A Tyrosine-protein kinase 97.7 1.3E-06 4.3E-11 85.2 -4.0 84 432-526 212-296 (327)
264 2y0a_A Death-associated protei 97.7 1.3E-06 4.6E-11 85.0 -3.9 87 432-526 184-270 (326)
265 1qpc_A LCK kinase; alpha beta 97.7 1.1E-06 3.7E-11 83.5 -4.6 84 431-525 176-260 (279)
266 1wak_A Serine/threonine-protei 97.7 4.8E-06 1.7E-10 83.2 0.0 35 432-466 260-294 (397)
267 3a7i_A MST3 kinase, serine/thr 97.7 1.4E-06 4.8E-11 83.8 -3.9 84 432-526 186-269 (303)
268 3gen_A Tyrosine-protein kinase 97.7 1.4E-06 4.7E-11 82.9 -3.9 84 432-526 188-272 (283)
269 3pls_A Macrophage-stimulating 97.7 1.7E-06 5.6E-11 83.0 -3.4 85 432-526 195-279 (298)
270 2x4f_A Myosin light chain kina 97.7 1.9E-06 6.4E-11 85.7 -3.1 87 432-526 255-341 (373)
271 3tki_A Serine/threonine-protei 97.7 3.8E-06 1.3E-10 81.7 -1.0 86 432-526 174-260 (323)
272 3f66_A Hepatocyte growth facto 97.7 1.6E-06 5.4E-11 83.2 -3.6 85 432-526 199-283 (298)
273 2a2a_A Death-associated protei 97.7 2.2E-06 7.5E-11 83.2 -2.6 87 432-526 185-271 (321)
274 2pvf_A Fibroblast growth facto 97.7 1.1E-06 3.6E-11 86.1 -5.0 84 432-526 226-310 (334)
275 1u5q_A Serine/threonine protei 97.7 3.7E-06 1.3E-10 82.7 -1.0 82 432-526 217-304 (348)
276 4e5w_A Tyrosine-protein kinase 97.7 6.6E-07 2.3E-11 86.0 -6.5 92 432-526 196-294 (302)
277 3g33_A Cell division protein k 97.7 8.2E-06 2.8E-10 78.6 1.3 35 432-466 186-220 (308)
278 2vx3_A Dual specificity tyrosi 97.7 7.1E-06 2.4E-10 81.8 0.9 35 432-466 225-259 (382)
279 3f3z_A Calcium/calmodulin-depe 97.7 2.7E-06 9.3E-11 80.6 -2.1 86 432-526 175-260 (277)
280 3fhr_A MAP kinase-activated pr 97.7 1.8E-06 6.1E-11 84.5 -3.5 89 432-526 196-286 (336)
281 3hyh_A Carbon catabolite-derep 97.7 1.6E-06 5.5E-11 81.8 -3.7 82 432-525 178-260 (275)
282 3com_A Serine/threonine-protei 97.7 4.5E-06 1.6E-10 80.6 -0.6 86 432-526 192-277 (314)
283 3kfa_A Tyrosine-protein kinase 97.7 1.8E-06 6.3E-11 82.2 -3.4 83 432-525 179-262 (288)
284 2xir_A Vascular endothelial gr 97.7 2E-06 6.8E-11 83.2 -3.4 86 431-526 216-302 (316)
285 1u46_A ACK-1, activated CDC42 97.7 1.6E-06 5.3E-11 82.8 -4.1 84 432-525 191-275 (291)
286 2bdw_A Hypothetical protein K1 97.7 3.1E-06 1E-10 83.8 -2.1 88 431-526 196-283 (362)
287 3fdn_A Serine/threonine-protei 97.7 1.8E-06 6.1E-11 82.0 -3.6 83 432-526 174-256 (279)
288 4aw0_A HPDK1, 3-phosphoinositi 97.7 2E-06 6.7E-11 82.5 -3.3 82 432-525 201-282 (311)
289 1nxk_A MAP kinase-activated pr 97.7 4.5E-06 1.5E-10 83.8 -0.9 91 431-525 229-319 (400)
290 2zv2_A Calcium/calmodulin-depe 97.7 6.3E-06 2.1E-10 79.0 0.1 85 432-526 204-291 (298)
291 2w1i_A JAK2; chromosomal rearr 97.7 9.8E-07 3.4E-11 86.0 -5.8 92 432-526 215-314 (326)
292 1fvr_A Tyrosine-protein kinase 97.7 1.9E-06 6.4E-11 84.0 -3.9 85 431-526 207-292 (327)
293 1p4o_A Insulin-like growth fac 97.7 1.7E-06 5.8E-11 84.0 -4.2 84 432-526 207-291 (322)
294 2eu9_A Dual specificity protei 97.7 5.4E-06 1.9E-10 81.4 -0.6 35 432-466 206-240 (355)
295 3dls_A PAS domain-containing s 97.6 3.1E-06 1.1E-10 82.8 -2.4 77 432-526 196-273 (335)
296 3h4j_B AMPK kdaid, SNF1-like p 97.6 5.8E-06 2E-10 80.8 -0.4 83 432-526 174-257 (336)
297 2eue_A Carbon catabolite derep 97.6 2.2E-06 7.4E-11 81.2 -3.5 83 432-526 178-261 (275)
298 2vwi_A Serine/threonine-protei 97.6 1.3E-06 4.4E-11 83.9 -5.2 88 432-526 193-286 (303)
299 2xrw_A Mitogen-activated prote 97.6 9.1E-06 3.1E-10 80.6 0.8 35 432-466 193-227 (371)
300 2izr_A Casein kinase I isoform 97.6 1.2E-06 4E-11 85.6 -5.6 89 432-525 184-272 (330)
301 2clq_A Mitogen-activated prote 97.6 3.9E-06 1.3E-10 80.2 -2.0 86 432-526 190-277 (295)
302 3ubd_A Ribosomal protein S6 ki 97.6 2.2E-06 7.4E-11 82.2 -3.9 79 432-522 193-271 (304)
303 2rio_A Serine/threonine-protei 97.6 7.7E-06 2.6E-10 83.0 -0.0 88 432-526 199-294 (434)
304 2jam_A Calcium/calmodulin-depe 97.6 3.2E-06 1.1E-10 81.3 -2.7 84 432-525 174-259 (304)
305 3m2w_A MAP kinase-activated pr 97.6 4.7E-06 1.6E-10 80.0 -1.6 83 440-526 173-255 (299)
306 4euu_A Serine/threonine-protei 97.6 9.2E-06 3.2E-10 78.7 0.4 86 439-525 197-300 (319)
307 2buj_A Serine/threonine-protei 97.6 4.3E-06 1.5E-10 80.9 -2.0 86 432-526 210-298 (317)
308 2vgo_A Serine/threonine-protei 97.6 3.1E-06 1E-10 80.6 -3.1 83 432-526 179-261 (284)
309 2ycf_A Serine/threonine-protei 97.6 5.1E-06 1.7E-10 80.6 -1.6 86 432-525 183-272 (322)
310 2j7t_A Serine/threonine-protei 97.6 5.9E-06 2E-10 79.3 -1.2 83 432-526 184-274 (302)
311 3a99_A Proto-oncogene serine/t 97.6 1.9E-06 6.6E-11 83.6 -4.8 77 432-526 215-292 (320)
312 3soa_A Calcium/calmodulin-depe 97.6 4.7E-06 1.6E-10 84.7 -2.1 85 432-526 180-266 (444)
313 4aaa_A Cyclin-dependent kinase 97.6 1.5E-05 5.1E-10 77.7 1.5 95 432-526 191-305 (331)
314 3kvw_A DYRK2, dual specificity 97.6 1.2E-05 4.2E-10 81.4 0.9 34 432-465 266-299 (429)
315 3c0i_A Peripheral plasma membr 97.6 3.5E-06 1.2E-10 83.0 -3.1 86 432-526 200-285 (351)
316 2owb_A Serine/threonine-protei 97.6 4.6E-06 1.6E-10 81.5 -2.3 83 432-526 208-290 (335)
317 3ork_A Serine/threonine protei 97.6 2E-06 6.8E-11 83.2 -4.9 86 432-525 186-271 (311)
318 1kob_A Twitchin; kinase, intra 97.6 3.7E-06 1.3E-10 84.0 -3.1 85 432-526 217-303 (387)
319 3i6u_A CDS1, serine/threonine- 97.6 5.8E-06 2E-10 83.5 -1.7 88 432-526 308-398 (419)
320 4eqm_A Protein kinase; transfe 97.6 3.2E-06 1.1E-10 80.9 -3.6 86 432-524 179-265 (294)
321 1blx_A Cyclin-dependent kinase 97.6 1.5E-05 5.1E-10 77.3 1.1 35 432-466 186-220 (326)
322 4fvq_A Tyrosine-protein kinase 97.6 1.6E-06 5.5E-11 82.7 -5.9 81 432-526 184-267 (289)
323 4agu_A Cyclin-dependent kinase 97.6 1.5E-05 5.1E-10 76.8 0.9 35 432-466 169-204 (311)
324 3p23_A Serine/threonine-protei 97.5 1.4E-05 4.8E-10 81.0 0.6 86 432-526 193-282 (432)
325 2pmi_A Negative RE, cyclin-dep 97.5 1.7E-05 5.6E-10 76.9 1.0 35 432-466 175-210 (317)
326 3e3p_A Protein kinase, putativ 97.5 1.4E-05 4.9E-10 78.7 0.6 95 432-526 198-313 (360)
327 2a19_B Interferon-induced, dou 97.5 2.1E-06 7.2E-11 81.6 -5.3 79 432-526 188-266 (284)
328 2h34_A Serine/threonine-protei 97.5 4.3E-06 1.5E-10 80.7 -3.2 85 432-525 202-287 (309)
329 3fe3_A MAP/microtubule affinit 97.5 4.3E-06 1.5E-10 81.5 -3.3 83 432-526 180-263 (328)
330 3zgw_A Maternal embryonic leuc 97.5 2.9E-06 1E-10 83.3 -4.7 83 432-526 176-259 (347)
331 2y7j_A Phosphorylase B kinase 97.5 4.7E-06 1.6E-10 82.6 -3.4 78 441-526 281-358 (365)
332 2qr7_A Ribosomal protein S6 ki 97.5 4.9E-06 1.7E-10 81.6 -3.2 88 432-526 187-276 (342)
333 3is5_A Calcium-dependent prote 97.5 7.6E-06 2.6E-10 77.9 -1.8 85 432-526 193-277 (285)
334 2wtk_C Serine/threonine-protei 97.5 4.6E-06 1.6E-10 80.2 -3.4 83 432-526 178-262 (305)
335 1phk_A Phosphorylase kinase; g 97.5 6.8E-06 2.3E-10 78.7 -2.2 79 440-526 204-282 (298)
336 2iwi_A Serine/threonine-protei 97.5 5.4E-06 1.9E-10 80.0 -3.1 77 432-526 205-282 (312)
337 3qa8_A MGC80376 protein; kinas 97.5 4.6E-05 1.6E-09 80.7 3.8 94 432-526 190-296 (676)
338 2ac3_A MAP kinase-interacting 97.5 6.4E-06 2.2E-10 79.6 -2.6 94 432-526 188-294 (316)
339 2yab_A Death-associated protei 97.5 6.2E-06 2.1E-10 81.5 -2.7 86 432-525 185-270 (361)
340 3gni_B Strad alpha; kinase fol 97.5 1.9E-05 6.5E-10 78.8 0.6 35 432-466 202-238 (389)
341 4g31_A Eukaryotic translation 97.5 4.9E-06 1.7E-10 79.8 -3.6 81 432-525 197-277 (299)
342 2y4i_B KSR2, HKSR2, kinase sup 97.5 6.4E-06 2.2E-10 79.7 -2.9 76 441-526 219-294 (319)
343 2h6d_A 5'-AMP-activated protei 97.5 3.9E-06 1.3E-10 79.4 -4.4 83 432-526 177-260 (276)
344 3eqc_A Dual specificity mitoge 97.5 4.1E-06 1.4E-10 82.7 -4.4 35 432-466 197-231 (360)
345 3ttj_A Mitogen-activated prote 97.5 2.8E-05 9.5E-10 79.6 1.7 35 432-466 230-264 (464)
346 2wei_A Calmodulin-domain prote 97.5 6.4E-06 2.2E-10 78.5 -3.0 86 432-526 190-275 (287)
347 1ob3_A PFPK5, cell division co 97.5 2.4E-05 8.3E-10 74.5 1.1 95 432-526 167-279 (288)
348 3qd2_B Eukaryotic translation 97.5 5.6E-06 1.9E-10 80.5 -3.6 82 432-526 243-324 (332)
349 2r3i_A Cell division protein k 97.4 2.8E-05 9.7E-10 74.3 1.3 35 432-466 170-205 (299)
350 3niz_A Rhodanese family protei 97.4 1E-05 3.4E-10 78.2 -1.9 35 432-466 186-221 (311)
351 2x7f_A TRAF2 and NCK-interacti 97.4 1.1E-05 3.8E-10 78.3 -1.7 85 432-526 196-285 (326)
352 3gbz_A Kinase, CMGC CDK; ssgci 97.4 2.5E-05 8.7E-10 76.0 0.8 35 432-466 204-239 (329)
353 3o0g_A Cell division protein k 97.4 1.5E-05 5.2E-10 76.0 -0.8 33 432-464 168-201 (292)
354 1x8b_A WEE1HU, WEE1-like prote 97.4 6.8E-06 2.3E-10 78.0 -3.4 81 432-526 197-278 (289)
355 3mi9_A Cell division protein k 97.4 3.2E-05 1.1E-09 75.9 1.3 95 432-526 195-310 (351)
356 3mtl_A Cell division protein k 97.4 2.7E-05 9.1E-10 75.6 0.6 35 432-466 167-202 (324)
357 2pml_X PFPK7, Ser/Thr protein 97.4 1E-05 3.4E-10 79.4 -2.6 94 432-526 217-321 (348)
358 2j0j_A Focal adhesion kinase 1 97.4 6.1E-06 2.1E-10 88.3 -4.7 85 431-526 558-643 (656)
359 3uc3_A Serine/threonine-protei 97.3 2E-05 6.9E-10 77.8 -1.5 88 432-525 184-272 (361)
360 4exu_A Mitogen-activated prote 97.3 5.1E-05 1.7E-09 75.2 1.4 35 432-466 208-243 (371)
361 3nyv_A Calmodulin-domain prote 97.3 1.5E-05 5E-10 82.2 -3.0 86 432-526 195-280 (484)
362 1pgv_A TMD-1, tropomodulin TMD 97.3 5.3E-05 1.8E-09 67.0 1.1 63 100-162 40-111 (197)
363 3nsz_A CK II alpha, casein kin 97.3 2.6E-05 9E-10 75.8 -1.0 33 433-465 198-231 (330)
364 4eut_A Serine/threonine-protei 97.3 3.7E-05 1.3E-09 77.0 -0.2 85 440-525 198-300 (396)
365 1pgv_A TMD-1, tropomodulin TMD 97.3 0.00013 4.5E-09 64.4 3.2 16 346-361 96-111 (197)
366 2i6l_A Mitogen-activated prote 97.3 3.7E-05 1.3E-09 74.1 -0.4 35 432-466 191-226 (320)
367 3pg1_A Mitogen-activated prote 97.2 4.2E-05 1.4E-09 75.4 -0.2 35 432-466 200-235 (362)
368 3rgf_A Cyclin-dependent kinase 97.2 4.1E-05 1.4E-09 76.8 -0.3 35 432-466 202-237 (405)
369 3qyz_A Mitogen-activated prote 97.2 2.8E-05 9.7E-10 76.8 -1.8 35 432-466 198-233 (364)
370 2y94_A 5'-AMP-activated protei 97.2 2.3E-05 8E-10 80.3 -2.5 82 432-525 182-264 (476)
371 4ejn_A RAC-alpha serine/threon 97.2 1.7E-05 5.9E-10 80.7 -3.5 82 432-525 316-402 (446)
372 3mwu_A Calmodulin-domain prote 97.2 3.2E-05 1.1E-09 79.7 -1.6 85 432-525 190-274 (486)
373 2b9h_A MAP kinase FUS3, mitoge 97.2 3E-05 1E-09 76.1 -1.7 35 432-466 189-224 (353)
374 1zy4_A Serine/threonine-protei 97.2 1.8E-05 6.1E-10 75.7 -3.4 83 432-526 197-282 (303)
375 1vzo_A Ribosomal protein S6 ki 97.2 1.8E-05 6E-10 78.0 -3.5 86 432-525 227-319 (355)
376 3lij_A Calcium/calmodulin depe 97.2 2.7E-05 9.3E-10 80.4 -2.3 86 432-526 205-290 (494)
377 1ua2_A CAK, cell division prot 97.2 6E-05 2.1E-09 73.8 0.2 34 432-465 179-213 (346)
378 3q5i_A Protein kinase; CDPK, m 97.2 2.3E-05 7.8E-10 81.2 -3.0 86 432-526 215-300 (504)
379 1o6l_A RAC-beta serine/threoni 97.2 3.3E-05 1.1E-09 75.5 -1.9 82 432-525 172-258 (337)
380 3coi_A Mitogen-activated prote 97.2 8.9E-05 3E-09 72.8 1.2 35 432-466 190-225 (353)
381 1j1b_A Glycogen synthase kinas 97.2 5.4E-05 1.8E-09 76.4 -0.4 36 431-466 222-258 (420)
382 4b99_A Mitogen-activated prote 97.1 0.00011 3.8E-09 73.2 1.8 35 432-466 229-264 (398)
383 1xjd_A Protein kinase C, theta 97.1 2.7E-05 9.1E-10 76.4 -2.9 82 432-525 185-267 (345)
384 3uqc_A Probable conserved tran 97.1 2E-05 6.8E-10 75.1 -4.1 79 441-525 178-256 (286)
385 1rdq_E PKA C-alpha, CAMP-depen 97.1 4.1E-05 1.4E-09 75.2 -1.9 78 432-521 205-282 (350)
386 3eb0_A Putative uncharacterize 97.1 6.2E-05 2.1E-09 74.9 -0.7 35 432-466 208-243 (383)
387 3uto_A Twitchin; kinase, muscl 97.1 3.4E-05 1.2E-09 81.0 -2.8 84 432-525 323-408 (573)
388 3oz6_A Mitogen-activated prote 97.1 0.0001 3.5E-09 73.5 0.5 35 432-466 197-232 (388)
389 2fst_X Mitogen-activated prote 97.0 9.6E-05 3.3E-09 73.1 0.1 35 432-466 196-231 (367)
390 2i0e_A Protein kinase C-beta I 97.0 6.4E-05 2.2E-09 73.9 -1.2 79 432-522 188-266 (353)
391 4e7w_A Glycogen synthase kinas 97.0 9.3E-05 3.2E-09 73.9 -0.1 35 432-466 208-243 (394)
392 1fot_A TPK1 delta, CAMP-depend 97.0 6E-05 2.1E-09 72.9 -1.6 82 432-525 170-256 (318)
393 3a8x_A Protein kinase C IOTA t 97.0 5.3E-05 1.8E-09 74.3 -2.1 86 432-522 177-264 (345)
394 3rp9_A Mitogen-activated prote 97.0 0.00011 3.9E-09 74.9 0.3 33 432-464 250-283 (458)
395 1cm8_A Phosphorylated MAP kina 97.0 0.00015 5.3E-09 71.6 1.1 35 432-466 192-227 (367)
396 3a62_A Ribosomal protein S6 ki 97.0 4.1E-05 1.4E-09 74.5 -3.1 80 432-523 188-267 (327)
397 3txo_A PKC-L, NPKC-ETA, protei 97.0 3.2E-05 1.1E-09 76.1 -3.9 79 432-522 191-269 (353)
398 4f9c_A Cell division cycle 7-r 97.0 0.00016 5.6E-09 71.1 1.1 34 432-465 213-247 (361)
399 4dc2_A Protein kinase C IOTA t 97.0 8.1E-05 2.8E-09 74.3 -1.4 86 432-522 220-307 (396)
400 2r5t_A Serine/threonine-protei 96.9 4E-05 1.4E-09 76.0 -3.6 81 432-524 206-286 (373)
401 3c4z_A Rhodopsin kinase; Ser/T 96.9 6.7E-05 2.3E-09 78.0 -2.3 85 432-524 356-440 (543)
402 3n9x_A Phosphotransferase; mal 96.9 0.00013 4.3E-09 74.0 -0.7 34 432-465 218-252 (432)
403 3pfq_A PKC-B, PKC-beta, protei 96.9 9.1E-05 3.1E-09 79.4 -1.9 79 432-522 509-587 (674)
404 4fr4_A YANK1, serine/threonine 96.8 0.00011 3.7E-09 73.1 -2.3 84 432-524 181-268 (384)
405 2acx_A G protein-coupled recep 96.5 0.00011 3.9E-09 76.6 -4.2 81 432-521 352-433 (576)
406 3e7e_A HBUB1, BUB1A, mitotic c 96.5 0.00034 1.2E-08 69.0 -1.0 34 432-465 252-285 (365)
407 3rfe_A Platelet glycoprotein I 96.4 0.0055 1.9E-07 50.3 6.3 36 126-161 32-67 (130)
408 3rfe_A Platelet glycoprotein I 96.4 0.0063 2.2E-07 49.9 6.5 56 129-186 12-68 (130)
409 3v8s_A RHO-associated protein 96.3 0.00012 4E-09 73.5 -5.4 84 432-525 236-327 (410)
410 2pzi_A Probable serine/threoni 96.1 0.00063 2.1E-08 73.1 -1.4 75 432-525 244-318 (681)
411 4aw2_A Serine/threonine-protei 96.0 0.00024 8.1E-09 71.9 -5.0 35 432-466 243-282 (437)
412 2vd5_A DMPK protein; serine/th 95.9 0.00031 1.1E-08 70.5 -4.8 35 432-466 230-271 (412)
413 3v5w_A G-protein coupled recep 95.6 0.00072 2.5E-08 71.2 -3.4 82 432-522 357-439 (689)
414 2lz0_A Uncharacterized protein 31.9 67 0.0023 24.1 4.8 13 120-132 15-27 (100)
415 2lz0_A Uncharacterized protein 20.4 1.4E+02 0.0048 22.3 4.7 40 142-182 13-52 (100)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.5e-53 Score=468.43 Aligned_cols=404 Identities=32% Similarity=0.558 Sum_probs=285.1
Q ss_pred cCCCchhHHHHHHHHHHhccC---CCCCCCCCCCCCCCCCcccceeeCCCCCEEEEEcCCCceecc---c----------
Q 009771 29 SATNISIHVAASEIERQALLN---SGWWKDRIPQNTSDHCGWVGITCDYEGRITDIGLQKSNIKGE---L---------- 92 (526)
Q Consensus 29 ~~~~~~~~~~~l~~~~~~~~~---~~~w~~~~~~~~~~~C~w~gv~C~~~~~v~~l~l~~~~~~~~---~---------- 92 (526)
+++..+.|++|+++||+++.+ +.+|+. +.|||.|.||+|+ .++|++++|++....+. +
T Consensus 6 ~~~~~~~~~~all~~k~~~~~~~~l~~W~~-----~~~~C~w~gv~C~-~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L 79 (768)
T 3rgz_A 6 PSQSLYREIHQLISFKDVLPDKNLLPDWSS-----NKNPCTFDGVTCR-DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGL 79 (768)
T ss_dssp --CCHHHHHHHHHHHHTTCSCTTSSTTCCT-----TSCGGGSTTEEEE-TTEEEEEECTTSCCCEEHHHHHHHTTTCTTC
T ss_pred cccCCHHHHHHHHHHHhhCCCcccccCCCC-----CCCCcCCcceEEC-CCcEEEEECCCCCcCCccCccChhHhccCcc
Confidence 334456789999999999875 678875 6799999999998 78999999985432221 1
Q ss_pred ------------CCCCcCCCCCCCEEeCCCCCCCCCCch--hccCCCCCCEEEccCccCCccCCcc--------------
Q 009771 93 ------------GRLNFSCFPNLQYLDLGSNNLSGSIPS--QIDSLSNLTYIYLYENNLTGTIPKE-------------- 144 (526)
Q Consensus 93 ------------~~~~~~~l~~L~~L~l~~n~~~~~~p~--~l~~l~~L~~L~Ls~n~~~~~ip~~-------------- 144 (526)
.+..++.+++|++|+|++|.++|.+|. .++++++|++|++++|.+.+.+|..
T Consensus 80 ~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls 159 (768)
T 3rgz_A 80 ESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLS 159 (768)
T ss_dssp CEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECC
T ss_pred cccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECC
Confidence 124677788888888888888777766 6666666666666655554433322
Q ss_pred -----------------------------------------------------------cCCCCCCCEEEccCCCCCCCC
Q 009771 145 -----------------------------------------------------------IGSLRNLEVLDLGSNNLNGTI 165 (526)
Q Consensus 145 -----------------------------------------------------------l~~l~~L~~L~L~~n~l~~~~ 165 (526)
++++++|++|++++|.+++.+
T Consensus 160 ~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~ 239 (768)
T 3rgz_A 160 ANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDF 239 (768)
T ss_dssp SSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCBCTTCCSCCEEECCSSCCCSCH
T ss_pred CCccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcccccCCCCCEEECcCCcCCCcc
Confidence 344445555555555554444
Q ss_pred ccccCCCCCCCEEEccCCcCCc----------------------cCCcccc-----------------------------
Q 009771 166 PIEIGSVRNLETLSLDGNKLSG----------------------VLPIYFG----------------------------- 194 (526)
Q Consensus 166 p~~l~~l~~L~~L~L~~n~l~~----------------------~~p~~~~----------------------------- 194 (526)
|..++++++|++|++++|.+++ .+|..+.
T Consensus 240 ~~~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~ 319 (768)
T 3rgz_A 240 SRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSL 319 (768)
T ss_dssp HHHTTTCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTT
T ss_pred cHHHhcCCCCCEEECCCCcccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCC
Confidence 4444444444444444443332 2222110
Q ss_pred -------------cCccc-ccCCC---------------------------------------------------CCCEE
Q 009771 195 -------------TIPIE-IESLR---------------------------------------------------NLQWL 209 (526)
Q Consensus 195 -------------~ip~~-l~~l~---------------------------------------------------~L~~L 209 (526)
.+|.. +.+++ +|++|
T Consensus 320 L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L 399 (768)
T 3rgz_A 320 LESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQEL 399 (768)
T ss_dssp CCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEE
T ss_pred ccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEE
Confidence 11211 22222 33333
Q ss_pred EccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCeeecccccCCCCCCccccCCCccceeecccccCC
Q 009771 210 DLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFN 289 (526)
Q Consensus 210 ~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~ 289 (526)
++++|++++.+|..++++++|++|++++|.+++.+|..++.+++|+.|++++|.+.+.+|..+..+++|++|++++|.++
T Consensus 400 ~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~ 479 (768)
T 3rgz_A 400 YLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLT 479 (768)
T ss_dssp ECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCC
T ss_pred ECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCccc
Confidence 33334444455556667778888899999998888888888888888888888888888888888888888888888888
Q ss_pred CCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCCCCCcccccCCCCCCeecCcCCcCcccCcccc-
Q 009771 290 GSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICGIIPDEL- 368 (526)
Q Consensus 290 g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~- 368 (526)
+.+|..+.++++|++|++++|++++.+|..++.+++|++|++++|.+++.+|..++.+++|++|++++|+++|.+|..+
T Consensus 480 ~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~ 559 (768)
T 3rgz_A 480 GEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMF 559 (768)
T ss_dssp SCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGG
T ss_pred CcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHh
Confidence 8888888888888888888888888888888888888888888888888888888888888888888887777666543
Q ss_pred ---------------------------------------------------------------------cCCCCCCEEec
Q 009771 369 ---------------------------------------------------------------------TKLSHLKYLNL 379 (526)
Q Consensus 369 ---------------------------------------------------------------------~~l~~L~~L~L 379 (526)
..+++|+.|++
T Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdL 639 (768)
T 3rgz_A 560 KQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDM 639 (768)
T ss_dssp TTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEEC
T ss_pred cccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEEC
Confidence 22456777888
Q ss_pred CCCcCcccchHHhhcCcCCCEEEccCCcCcccccccccCCCCCCeEEcCCCCCCchhcc
Q 009771 380 SSNLLSGQIPFAIGKLFNLASLDLSKNKLSGSIPTEIGNCSELRNLTLNHNSLNGKLAH 438 (526)
Q Consensus 380 ~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~ 438 (526)
++|+++|.+|..++.+++|++|++++|.++|.+|..++++++|+.|++++|+++.+...
T Consensus 640 s~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~ 698 (768)
T 3rgz_A 640 SYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQ 698 (768)
T ss_dssp CSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCG
T ss_pred cCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCCh
Confidence 88888888888888888888888888888888888888888888888888887755443
No 2
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=2.7e-49 Score=425.32 Aligned_cols=387 Identities=20% Similarity=0.327 Sum_probs=249.5
Q ss_pred CchhHHHHHHHHHHhccCC------------CCCCCCCCCCCCCCCcc---cceeeCCCCCEEEEEcCCCceecccCCCC
Q 009771 32 NISIHVAASEIERQALLNS------------GWWKDRIPQNTSDHCGW---VGITCDYEGRITDIGLQKSNIKGELGRLN 96 (526)
Q Consensus 32 ~~~~~~~~l~~~~~~~~~~------------~~w~~~~~~~~~~~C~w---~gv~C~~~~~v~~l~l~~~~~~~~~~~~~ 96 (526)
....|+.|+.++++++... .+|+. +.|+|.| .||+|+..++|++|+|++....+.+ ++.
T Consensus 27 ~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~-----~~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~l-p~~ 100 (636)
T 4eco_A 27 EYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNF-----NKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRV-PDA 100 (636)
T ss_dssp HHHHHHHHHHHHHHHTTGGGCCCCC------CCCCC-----SSCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEE-CGG
T ss_pred hHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCC-----CCCcccccCCCCeEEcCCCCEEEEEecCcccCCcC-ChH
Confidence 3446889999999887531 25654 5789999 9999987799999999965544433 578
Q ss_pred cCCCCCCCEEeCCCCCC---------------------------------------------------------------
Q 009771 97 FSCFPNLQYLDLGSNNL--------------------------------------------------------------- 113 (526)
Q Consensus 97 ~~~l~~L~~L~l~~n~~--------------------------------------------------------------- 113 (526)
++.+++|++|+|++|.+
T Consensus 101 l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 180 (636)
T 4eco_A 101 IGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSR 180 (636)
T ss_dssp GGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCC
T ss_pred HhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccc
Confidence 99999999999998843
Q ss_pred ---------------CCCCchhccCCCCCCEEEccCccCCcc-----------------CCcccC--CCCCCCEEEccCC
Q 009771 114 ---------------SGSIPSQIDSLSNLTYIYLYENNLTGT-----------------IPKEIG--SLRNLEVLDLGSN 159 (526)
Q Consensus 114 ---------------~~~~p~~l~~l~~L~~L~Ls~n~~~~~-----------------ip~~l~--~l~~L~~L~L~~n 159 (526)
+| +|..++++++|++|+|++|.++|. +|+.++ ++++|++|+|++|
T Consensus 181 ~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n 259 (636)
T 4eco_A 181 ITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNC 259 (636)
T ss_dssp CCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECC
T ss_pred cchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCC
Confidence 34 888999999999999999999986 999999 9999999999999
Q ss_pred CCCCCCccccCCCCCCCEEEccCCc-CCc-cCCcccc----------------------cCcc--cccCCCCCCEEEccC
Q 009771 160 NLNGTIPIEIGSVRNLETLSLDGNK-LSG-VLPIYFG----------------------TIPI--EIESLRNLQWLDLSS 213 (526)
Q Consensus 160 ~l~~~~p~~l~~l~~L~~L~L~~n~-l~~-~~p~~~~----------------------~ip~--~l~~l~~L~~L~l~~ 213 (526)
.+.+.+|..++++++|++|++++|+ ++| .+|..++ .+|. .++++++|++|++++
T Consensus 260 ~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip~~~~l~~l~~L~~L~L~~ 339 (636)
T 4eco_A 260 PNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLY 339 (636)
T ss_dssp TTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSSCCCHHHHTTCTTCCEEECCS
T ss_pred cCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCCccCchhhhccCCCCCEEeCcC
Confidence 9999999999999999999999998 998 7775443 2333 344444444444444
Q ss_pred CcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcC-CCeeecccccCCCCCCccccCCC--ccceeecccccCCC
Q 009771 214 NKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKS-LTALSMDANNLGGPIPSTLFRLT--NIEYLSLGFNRFNG 290 (526)
Q Consensus 214 n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~-L~~L~l~~n~l~~~~p~~l~~~~--~L~~L~L~~n~l~g 290 (526)
|+++|.+| .++.+++|++|++++|.++ .+|..+..+++ |+.|++++|.++ .+|..+...+ +|+.|++++|.+++
T Consensus 340 N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~ 416 (636)
T 4eco_A 340 NQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGS 416 (636)
T ss_dssp CCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTT
T ss_pred CcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCC
Confidence 44444444 4444444444444444444 34444444444 555555555444 4444443322 45555555555554
Q ss_pred CCchhhh-------CCCCCcEEEeeCccCcCCCCCC-CCCCCcccEEECCCCcCCCCCcccccC--------CCCCCeec
Q 009771 291 SIPREIV-------NLKNLTSLSLGGNKLTGHIPST-LGRLTSLQILDLSSNQLHSSIPLVIGN--------FSALSYLD 354 (526)
Q Consensus 291 ~~p~~l~-------~~~~L~~L~l~~n~l~~~~p~~-l~~l~~L~~L~Ls~n~l~~~~~~~~~~--------l~~L~~L~ 354 (526)
.+|..+. .+++|++|++++|.++ .+|.. +..+++|++|++++|.++ .+|..... +++|++|+
T Consensus 417 ~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~ 494 (636)
T 4eco_A 417 VDGKNFDPLDPTPFKGINVSSINLSNNQIS-KFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSID 494 (636)
T ss_dssp TTTCSSCTTCSSCCCCCCEEEEECCSSCCC-SCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEE
T ss_pred cchhhhcccccccccCCCCCEEECcCCccC-cCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEE
Confidence 4444444 4445555555555554 22222 223455555555555555 33322211 11556666
Q ss_pred CcCCcCcccCccccc--CCCCCCEEecCCCcCcccchHHhhcCcCCCEEEc------cCCcCcccccccccCCCCCCeEE
Q 009771 355 LSDNRICGIIPDELT--KLSHLKYLNLSSNLLSGQIPFAIGKLFNLASLDL------SKNKLSGSIPTEIGNCSELRNLT 426 (526)
Q Consensus 355 L~~n~l~~~~~~~~~--~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l------~~n~l~~~~~~~~~~l~~L~~l~ 426 (526)
+++|+++ .+|..+. .+++|++|++++|++++ +|..++.+++|++|++ ++|.+.+.+|..++++++|+.|+
T Consensus 495 Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~ 572 (636)
T 4eco_A 495 LRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQ 572 (636)
T ss_dssp CCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEE
T ss_pred CcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEE
Confidence 6666555 4555554 55666666666666665 5555666666666666 34555556666666666666666
Q ss_pred cCCCCC
Q 009771 427 LNHNSL 432 (526)
Q Consensus 427 l~~n~l 432 (526)
+++|.+
T Consensus 573 Ls~N~l 578 (636)
T 4eco_A 573 IGSNDI 578 (636)
T ss_dssp CCSSCC
T ss_pred CCCCcC
Confidence 666655
No 3
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=4.5e-48 Score=423.14 Aligned_cols=389 Identities=22% Similarity=0.292 Sum_probs=267.7
Q ss_pred CCCchhHHHHHHHHHHhccCCCCCCCCCCCCCCCC--Ccc------------cceeeCCCCCEEEEEcCCCceecccCCC
Q 009771 30 ATNISIHVAASEIERQALLNSGWWKDRIPQNTSDH--CGW------------VGITCDYEGRITDIGLQKSNIKGELGRL 95 (526)
Q Consensus 30 ~~~~~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~--C~w------------~gv~C~~~~~v~~l~l~~~~~~~~~~~~ 95 (526)
+.....|+.|+.++|+++.+. +|+....+...+| |+| .||+|+..++|++|+|++....+.+ ++
T Consensus 264 ~~~~~~d~~ALl~~k~~l~~~-~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~i-p~ 341 (876)
T 4ecn_A 264 TAEYIKDYKALKAIWEALDGK-NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRV-PD 341 (876)
T ss_dssp CCHHHHHHHHHHHHHHHTTGG-GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEEE-CG
T ss_pred cccchHHHHHHHHHHHHcCCC-CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCcC-ch
Confidence 334456899999999998654 7875321112456 999 9999987899999999965544433 67
Q ss_pred CcCCCCCCCEEeC-CCCCCCCC----------------------------------------------------------
Q 009771 96 NFSCFPNLQYLDL-GSNNLSGS---------------------------------------------------------- 116 (526)
Q Consensus 96 ~~~~l~~L~~L~l-~~n~~~~~---------------------------------------------------------- 116 (526)
.++++++|++|+| ++|.+.|.
T Consensus 342 ~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~~ 421 (876)
T 4ecn_A 342 AIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDS 421 (876)
T ss_dssp GGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCCC
T ss_pred HHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccccccccc
Confidence 8999999999999 77754433
Q ss_pred ------------------CchhccCCCCCCEEEccCccCCc-----------------cCCcccC--CCCCCCEEEccCC
Q 009771 117 ------------------IPSQIDSLSNLTYIYLYENNLTG-----------------TIPKEIG--SLRNLEVLDLGSN 159 (526)
Q Consensus 117 ------------------~p~~l~~l~~L~~L~Ls~n~~~~-----------------~ip~~l~--~l~~L~~L~L~~n 159 (526)
+|..++++++|++|+|++|.++| .+|+.++ ++++|++|+|++|
T Consensus 422 ~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N 501 (876)
T 4ecn_A 422 RISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNC 501 (876)
T ss_dssp CCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESC
T ss_pred ccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCC
Confidence 78899999999999999999998 4999988 9999999999999
Q ss_pred CCCCCCccccCCCCCCCEEEccCCc-CCc-cCCcccccCcccccCCCCCCEEEccCCcCCCcCch--hhcCcCccCcccc
Q 009771 160 NLNGTIPIEIGSVRNLETLSLDGNK-LSG-VLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPK--EIGSLRNLKELDL 235 (526)
Q Consensus 160 ~l~~~~p~~l~~l~~L~~L~L~~n~-l~~-~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~--~l~~l~~L~~L~l 235 (526)
.+.+.+|..++++++|++|++++|+ ++| .+|..++.++..+..+++|++|++++|+++ .+|. .++++++|+.|++
T Consensus 502 ~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~L 580 (876)
T 4ecn_A 502 PNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDC 580 (876)
T ss_dssp TTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEEC
T ss_pred CCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEEC
Confidence 9999999999999999999999998 998 788766544434445667788888887777 6776 7777777778888
Q ss_pred cccccCCCCchhhhcCcCCCeeecccccCCCCCCccccCCCc-cceeecccccCCCCCchhhhCCCC--CcEEEeeCccC
Q 009771 236 SSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTN-IEYLSLGFNRFNGSIPREIVNLKN--LTSLSLGGNKL 312 (526)
Q Consensus 236 ~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~-L~~L~L~~n~l~g~~p~~l~~~~~--L~~L~l~~n~l 312 (526)
++|.++ .+| .++.+++|+.|++++|.++ .+|..+..+++ |+.|++++|.++ .+|..+...+. |+.|++++|.+
T Consensus 581 s~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l 656 (876)
T 4ecn_A 581 VHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKI 656 (876)
T ss_dssp TTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCT
T ss_pred CCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcC
Confidence 777777 666 6777777777777777777 67777777777 777777777776 56665555433 77777777777
Q ss_pred cCCCCCCC---C--CCCcccEEECCCCcCCCCCcccc-cCCCCCCeecCcCCcCcccCcccccCC--------CCCCEEe
Q 009771 313 TGHIPSTL---G--RLTSLQILDLSSNQLHSSIPLVI-GNFSALSYLDLSDNRICGIIPDELTKL--------SHLKYLN 378 (526)
Q Consensus 313 ~~~~p~~l---~--~l~~L~~L~Ls~n~l~~~~~~~~-~~l~~L~~L~L~~n~l~~~~~~~~~~l--------~~L~~L~ 378 (526)
.+.+|... . .+++|+.|++++|.++ .+|..+ ..+++|+.|++++|+++ .+|..+... ++|+.|+
T Consensus 657 ~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~ 734 (876)
T 4ecn_A 657 GSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTID 734 (876)
T ss_dssp TTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEE
T ss_pred CCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEE
Confidence 66544221 1 2235555555555555 233322 24455555555555544 333322211 1455555
Q ss_pred cCCCcCcccchHHhh--cCcCCCEEEccCCcCcccccccccCCCCCCeEEcCC
Q 009771 379 LSSNLLSGQIPFAIG--KLFNLASLDLSKNKLSGSIPTEIGNCSELRNLTLNH 429 (526)
Q Consensus 379 L~~n~l~~~~~~~~~--~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~ 429 (526)
|++|+++ .+|..+. .+++|+.|++++|.+++ +|..+..+++|+.|++++
T Consensus 735 Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~ 785 (876)
T 4ecn_A 735 LRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRH 785 (876)
T ss_dssp CCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCC
T ss_pred CCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCC
Confidence 5555544 3444443 44455555555555444 444444445555554443
No 4
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=7.6e-45 Score=399.38 Aligned_cols=358 Identities=37% Similarity=0.570 Sum_probs=327.7
Q ss_pred CCEEEEEcCCCceecccCCCCcCCCCCCCEEeCCCCCCCCCCchh-ccCCCCCCEEEccCccCCccCCcccCCCC-CCCE
Q 009771 76 GRITDIGLQKSNIKGELGRLNFSCFPNLQYLDLGSNNLSGSIPSQ-IDSLSNLTYIYLYENNLTGTIPKEIGSLR-NLEV 153 (526)
Q Consensus 76 ~~v~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~-l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~-~L~~ 153 (526)
..++.+++++......+ +..++.+++|++|++++|.+.|.+|.. +.++++|++|++++|.+++.+|..+.+++ +|++
T Consensus 294 ~~L~~L~Ls~n~l~~~~-p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~ 372 (768)
T 3rgz_A 294 DTLTGLDLSGNHFYGAV-PPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLT 372 (768)
T ss_dssp TTCSEEECCSSEEEECC-CGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSE
T ss_pred CcCCEEECcCCcCCCcc-chHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcE
Confidence 56888999876554322 677999999999999999999888876 99999999999999999999999998887 9999
Q ss_pred EEccCCCCCCCCccccCC--CCCCCEEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccC
Q 009771 154 LDLGSNNLNGTIPIEIGS--VRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLK 231 (526)
Q Consensus 154 L~L~~n~l~~~~p~~l~~--l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~ 231 (526)
|++++|.++|.+|..+.. +++|++|++++|.+++.+|.. ++++++|++|++++|++++.+|..++++++|+
T Consensus 373 L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~-------l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 445 (768)
T 3rgz_A 373 LDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPT-------LSNCSELVSLHLSFNYLSGTIPSSLGSLSKLR 445 (768)
T ss_dssp EECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGG-------GGGCTTCCEEECCSSEEESCCCGGGGGCTTCC
T ss_pred EEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHH-------HhcCCCCCEEECcCCcccCcccHHHhcCCCCC
Confidence 999999999999988877 889999999999999876654 46888999999999999999999999999999
Q ss_pred cccccccccCCCCchhhhcCcCCCeeecccccCCCCCCccccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCcc
Q 009771 232 ELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNK 311 (526)
Q Consensus 232 ~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~ 311 (526)
.|++++|.+.+.+|..+..+++|+.|++++|.+++.+|..+..+++|++|++++|++++.+|.+++.+++|++|++++|+
T Consensus 446 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 525 (768)
T 3rgz_A 446 DLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNS 525 (768)
T ss_dssp EEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSC
T ss_pred EEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCCCCCCCCCCcccEEECCCCcCCCCCcccc-----------------------------------------------
Q 009771 312 LTGHIPSTLGRLTSLQILDLSSNQLHSSIPLVI----------------------------------------------- 344 (526)
Q Consensus 312 l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~----------------------------------------------- 344 (526)
+.+.+|..++.+++|++|++++|.++|.+|..+
T Consensus 526 l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 605 (768)
T 3rgz_A 526 FSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLN 605 (768)
T ss_dssp CEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGG
T ss_pred ccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhh
Confidence 999999999999999999999999988777543
Q ss_pred -----------------------cCCCCCCeecCcCCcCcccCcccccCCCCCCEEecCCCcCcccchHHhhcCcCCCEE
Q 009771 345 -----------------------GNFSALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLLSGQIPFAIGKLFNLASL 401 (526)
Q Consensus 345 -----------------------~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L 401 (526)
+.+++|++|++++|+++|.+|..++.+++|+.|+|++|+++|.+|..++.+++|++|
T Consensus 606 ~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~L 685 (768)
T 3rgz_A 606 RLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNIL 685 (768)
T ss_dssp GGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEE
T ss_pred ccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEE
Confidence 335678999999999999999999999999999999999999999999999999999
Q ss_pred EccCCcCcccccccccCCCCCCeEEcCCCCCCchhccccc
Q 009771 402 DLSKNKLSGSIPTEIGNCSELRNLTLNHNSLNGKLAHTMV 441 (526)
Q Consensus 402 ~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~ 441 (526)
|+++|+++|.+|..++++++|++|++++|+++.+.....+
T Consensus 686 dLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~ 725 (768)
T 3rgz_A 686 DLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQ 725 (768)
T ss_dssp ECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSS
T ss_pred ECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchh
Confidence 9999999999999999999999999999999877665443
No 5
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=3.5e-41 Score=348.72 Aligned_cols=331 Identities=22% Similarity=0.271 Sum_probs=207.0
Q ss_pred CCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccC-CcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEE
Q 009771 101 PNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTI-PKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLS 179 (526)
Q Consensus 101 ~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~i-p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ 179 (526)
++|++|++++|.+++..|..++++++|++|++++|.+.+.+ |..|.++++|++|+|++|.+++..|..++++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 34555555555554444445555555555555555544333 23344555555555555555444444555555555555
Q ss_pred ccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchh-hcCcCccCcccccccccCCCCchhhhcC--cCCCe
Q 009771 180 LDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKE-IGSLRNLKELDLSSNKLGGVLPQEIENL--KSLTA 256 (526)
Q Consensus 180 L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~-l~~l~~L~~L~l~~n~l~~~~p~~l~~l--~~L~~ 256 (526)
+++|.+++.+|.. ..+.++++|++|++++|++++..|.. +.++++|++|++++|.+++..+..+..+ .+|+.
T Consensus 110 L~~n~l~~~~~~~-----~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~ 184 (455)
T 3v47_A 110 LTQCNLDGAVLSG-----NFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTL 184 (455)
T ss_dssp CTTSCCBTHHHHS-----STTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEE
T ss_pred CCCCCCCccccCc-----ccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccc
Confidence 5555544422211 01234445555555555555444433 4455555555555555554444444433 34444
Q ss_pred eecccccCCCCCCcc--------ccCCCccceeecccccCCCCCchhhh-------------------------------
Q 009771 257 LSMDANNLGGPIPST--------LFRLTNIEYLSLGFNRFNGSIPREIV------------------------------- 297 (526)
Q Consensus 257 L~l~~n~l~~~~p~~--------l~~~~~L~~L~L~~n~l~g~~p~~l~------------------------------- 297 (526)
|++++|.+.+..+.. +..+++|++|++++|.+++..|..+.
T Consensus 185 L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~ 264 (455)
T 3v47_A 185 LRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDP 264 (455)
T ss_dssp EECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCC
T ss_pred cccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccC
Confidence 444444444322221 11234444444444444433332221
Q ss_pred --------CCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCCCCCcccccCCCCCCeecCcCCcCcccCccccc
Q 009771 298 --------NLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICGIIPDELT 369 (526)
Q Consensus 298 --------~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 369 (526)
..++|+.|++++|.+.+..|..++.+++|++|++++|.+++..|..+..+++|++|++++|.+++..|..+.
T Consensus 265 ~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 344 (455)
T 3v47_A 265 DNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFE 344 (455)
T ss_dssp CTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGT
T ss_pred cccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhc
Confidence 125788899999998888888888899999999999999888888888889999999999998888888888
Q ss_pred CCCCCCEEecCCCcCcccchHHhhcCcCCCEEEccCCcCcccccccccCCCCCCeEEcCCCCCCchh
Q 009771 370 KLSHLKYLNLSSNLLSGQIPFAIGKLFNLASLDLSKNKLSGSIPTEIGNCSELRNLTLNHNSLNGKL 436 (526)
Q Consensus 370 ~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~ 436 (526)
.+++|++|++++|++++..|..++.+++|++|++++|.+++..+..+..+++|+.|++++|+++...
T Consensus 345 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 411 (455)
T 3v47_A 345 NLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 411 (455)
T ss_dssp TCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCT
T ss_pred CcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCC
Confidence 8899999999999998887888888999999999999988766667788889999999999886443
No 6
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=5.3e-42 Score=336.54 Aligned_cols=295 Identities=32% Similarity=0.497 Sum_probs=226.4
Q ss_pred CCchhHHHHHHHHHHhccC---CCCCCCCCCCCCCCCCc--ccceeeCCCCCEEEEEcCCCceecccCCCCcCCCCCCCE
Q 009771 31 TNISIHVAASEIERQALLN---SGWWKDRIPQNTSDHCG--WVGITCDYEGRITDIGLQKSNIKGELGRLNFSCFPNLQY 105 (526)
Q Consensus 31 ~~~~~~~~~l~~~~~~~~~---~~~w~~~~~~~~~~~C~--w~gv~C~~~~~v~~l~l~~~~~~~~~~~~~~~~l~~L~~ 105 (526)
.|.+.|++|++++|+++.+ +.+|.. +.|||. |.||+|+... ...+++.
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~~l~~W~~-----~~~~C~~~w~gv~C~~~~----------------------~~~~l~~ 54 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPTTLSSWLP-----TTDCCNRTWLGVLCDTDT----------------------QTYRVNN 54 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCT-----TSCTTTTCSTTEEECCSS----------------------SCCCEEE
T ss_pred CCCHHHHHHHHHHHHhcCCcccccCCCC-----CCCCCcCCCcceEeCCCC----------------------CCceEEE
Confidence 4677899999999999865 567865 578998 9999997431 0013445
Q ss_pred EeCCCCCCCC--CCchhccCCCCCCEEEccC-ccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccC
Q 009771 106 LDLGSNNLSG--SIPSQIDSLSNLTYIYLYE-NNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDG 182 (526)
Q Consensus 106 L~l~~n~~~~--~~p~~l~~l~~L~~L~Ls~-n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~ 182 (526)
|++++|.++| .+|..++++++|++|++++ |.+.+.+|..|+++++|++|+|++|.+++.+|..+.++++|++|++++
T Consensus 55 L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~ 134 (313)
T 1ogq_A 55 LDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSY 134 (313)
T ss_dssp EEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCS
T ss_pred EECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCC
Confidence 6666677777 6777888888888888884 778777888888888888888888888777887788888888888888
Q ss_pred CcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcC-ccCcccccccccCCCCchhhhcCcCCCeeeccc
Q 009771 183 NKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLR-NLKELDLSSNKLGGVLPQEIENLKSLTALSMDA 261 (526)
Q Consensus 183 n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~-~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~ 261 (526)
|.+++.+|.. +.++++|++|++++|++++.+|..+++++ +|++|++++|.+++.+|..+..++ |+.|++++
T Consensus 135 N~l~~~~p~~-------~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~ 206 (313)
T 1ogq_A 135 NALSGTLPPS-------ISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSR 206 (313)
T ss_dssp SEEESCCCGG-------GGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCS
T ss_pred CccCCcCChH-------HhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcC
Confidence 8877665543 45677888888888888877888787776 788888888888877777777776 88888888
Q ss_pred ccCCCCCCccccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCCCCCc
Q 009771 262 NNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSIP 341 (526)
Q Consensus 262 n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~ 341 (526)
|.+++..|..+..+++|+.|++++|.+++.+|. +..+++|++|++++|++++.+|..+..+++|++|++++|+++|.+|
T Consensus 207 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip 285 (313)
T 1ogq_A 207 NMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285 (313)
T ss_dssp SEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECC
T ss_pred CcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCC
Confidence 887777777777788888888888887766554 6677788888888888877777777777888888888888877777
Q ss_pred ccccCCCCCCeecCcCCc-Ccc
Q 009771 342 LVIGNFSALSYLDLSDNR-ICG 362 (526)
Q Consensus 342 ~~~~~l~~L~~L~L~~n~-l~~ 362 (526)
.. +.+++|+.+++++|. +.|
T Consensus 286 ~~-~~l~~L~~l~l~~N~~lc~ 306 (313)
T 1ogq_A 286 QG-GNLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp CS-TTGGGSCGGGTCSSSEEES
T ss_pred CC-ccccccChHHhcCCCCccC
Confidence 65 677778888888776 444
No 7
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=7.8e-40 Score=351.01 Aligned_cols=348 Identities=22% Similarity=0.259 Sum_probs=241.7
Q ss_pred CCEEEEEcCCCceecccCCCCcCCCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEE
Q 009771 76 GRITDIGLQKSNIKGELGRLNFSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLD 155 (526)
Q Consensus 76 ~~v~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~ 155 (526)
.+++.+++++..... +.+..|.++++|++|++++|.+++..|..|+++++|++|+|++|.+++..|..|+++++|++|+
T Consensus 32 ~~l~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 110 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKI-LKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLV 110 (606)
T ss_dssp TTCCEEECTTSCCCE-ECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEE
T ss_pred CCcCEEECCCCCcCE-eChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEE
Confidence 357777777544332 2244566777777777777777666666677777777777777777666666666677777777
Q ss_pred ccCCCCCCCCccccCCCCCCCEEEccCCcCCc-cCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhc---------
Q 009771 156 LGSNNLNGTIPIEIGSVRNLETLSLDGNKLSG-VLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIG--------- 225 (526)
Q Consensus 156 L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~-~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~--------- 225 (526)
+++|.+++..+..++++++|++|++++|.+++ .+|. .++++++|++|++++|++++..+..++
T Consensus 111 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~-------~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l 183 (606)
T 3vq2_A 111 AVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPA-------YFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVN 183 (606)
T ss_dssp CTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCG-------GGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCC
T ss_pred ccCCccccccccccCCCCCCCEEeCCCCcccceechH-------hHhhcCCCCEEEccCCcceecChhhhhhhhcccccc
Confidence 76666665554556666666666666666554 2232 334444455555544444433332222
Q ss_pred --------------------------------------------------------------------------------
Q 009771 226 -------------------------------------------------------------------------------- 225 (526)
Q Consensus 226 -------------------------------------------------------------------------------- 225 (526)
T Consensus 184 ~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l 263 (606)
T 3vq2_A 184 LSLDMSLNPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTI 263 (606)
T ss_dssp CEEECTTCCCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEE
T ss_pred ceeeccCCCcceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccH
Confidence
Q ss_pred -----------------------------------------CcCccCcccccccccCCCCch------------------
Q 009771 226 -----------------------------------------SLRNLKELDLSSNKLGGVLPQ------------------ 246 (526)
Q Consensus 226 -----------------------------------------~l~~L~~L~l~~n~l~~~~p~------------------ 246 (526)
.+++|++|++++|.+ +.+|.
T Consensus 264 ~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l-~~lp~~~l~~L~~L~l~~n~~~~ 342 (606)
T 3vq2_A 264 DEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQL-KQFPTLDLPFLKSLTLTMNKGSI 342 (606)
T ss_dssp EEEEECCCTTCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCC-SSCCCCCCSSCCEEEEESCSSCE
T ss_pred hheeccccccccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccC-cccccCCCCccceeeccCCcCcc
Confidence 112233333333332 12221
Q ss_pred --hhhcCcCCCeeecccccCCCC--CCccccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCC-CCCC
Q 009771 247 --EIENLKSLTALSMDANNLGGP--IPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIP-STLG 321 (526)
Q Consensus 247 --~l~~l~~L~~L~l~~n~l~~~--~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p-~~l~ 321 (526)
.+..+++|++|++++|.+++. +|..+..+++|++|++++|.+++ +|..+..+++|+.|++++|.+.+..| ..+.
T Consensus 343 ~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 421 (606)
T 3vq2_A 343 SFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFL 421 (606)
T ss_dssp ECCCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTT
T ss_pred chhhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhh
Confidence 233456666777777766654 36677788889999998888775 56778888888999998888887776 6788
Q ss_pred CCCcccEEECCCCcCCCCCcccccCCCCCCeecCcCCcCcc-cCcccccCCCCCCEEecCCCcCcccchHHhhcCcCCCE
Q 009771 322 RLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICG-IIPDELTKLSHLKYLNLSSNLLSGQIPFAIGKLFNLAS 400 (526)
Q Consensus 322 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~ 400 (526)
.+++|++|++++|.+.+..|..+..+++|++|++++|.+++ .+|..+..+++|++|++++|++++..|..++.+++|++
T Consensus 422 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 501 (606)
T 3vq2_A 422 SLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQL 501 (606)
T ss_dssp TCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred ccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCE
Confidence 88888899999888888888888888888888888888887 46778888888888999888888888888888888888
Q ss_pred EEccCCcCcccccccccCCCCCCeEEcCCCCCC
Q 009771 401 LDLSKNKLSGSIPTEIGNCSELRNLTLNHNSLN 433 (526)
Q Consensus 401 L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~ 433 (526)
|++++|++++..|..++++++|+.|++++|+++
T Consensus 502 L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 534 (606)
T 3vq2_A 502 LNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE 534 (606)
T ss_dssp EECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC
T ss_pred EECCCCcCCCcCHHHccCCCcCCEEECCCCcCc
Confidence 998888888888888888888888888888886
No 8
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.7e-40 Score=356.94 Aligned_cols=340 Identities=21% Similarity=0.318 Sum_probs=302.0
Q ss_pred CCEEEEEcCCCceecc----------------cCCCCcC--CCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCcc-
Q 009771 76 GRITDIGLQKSNIKGE----------------LGRLNFS--CFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENN- 136 (526)
Q Consensus 76 ~~v~~l~l~~~~~~~~----------------~~~~~~~--~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~- 136 (526)
.+++.+++++....+. .-+..++ ++++|++|++++|.+.+.+|..++++++|++|++++|.
T Consensus 206 ~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~ 285 (636)
T 4eco_A 206 TKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRG 285 (636)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTT
T ss_pred cCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCC
Confidence 4678888885544331 0266777 99999999999999999999999999999999999998
Q ss_pred CCc-cCCcccCCC------CCCCEEEccCCCCCCCCcc--ccCCCCCCCEEEccCCcCCccCCcccccCcccccCCCCCC
Q 009771 137 LTG-TIPKEIGSL------RNLEVLDLGSNNLNGTIPI--EIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQ 207 (526)
Q Consensus 137 ~~~-~ip~~l~~l------~~L~~L~L~~n~l~~~~p~--~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~ 207 (526)
++| .+|..++++ ++|++|++++|.++ .+|. .++++++|++|++++|.++|.+| . ++++++|+
T Consensus 286 l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~-------~~~l~~L~ 356 (636)
T 4eco_A 286 ISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-A-------FGSEIKLA 356 (636)
T ss_dssp SCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-C-------CEEEEEES
T ss_pred CccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-h-------hCCCCCCC
Confidence 998 899988876 99999999999999 8998 89999999999999999998777 3 36788999
Q ss_pred EEEccCCcCCCcCchhhcCcCc-cCcccccccccCCCCchhhhcCc--CCCeeecccccCCCCCCcccc-------CCCc
Q 009771 208 WLDLSSNKLSGTIPKEIGSLRN-LKELDLSSNKLGGVLPQEIENLK--SLTALSMDANNLGGPIPSTLF-------RLTN 277 (526)
Q Consensus 208 ~L~l~~n~l~~~~p~~l~~l~~-L~~L~l~~n~l~~~~p~~l~~l~--~L~~L~l~~n~l~~~~p~~l~-------~~~~ 277 (526)
+|++++|+++ .+|..++++++ |++|++++|.++ .+|..+..++ +|+.|++++|.+++.+|..+. .+++
T Consensus 357 ~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~ 434 (636)
T 4eco_A 357 SLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGIN 434 (636)
T ss_dssp EEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCC
T ss_pred EEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCC
Confidence 9999999999 88999999999 999999999999 7888777655 899999999999999998888 7889
Q ss_pred cceeecccccCCCCCch-hhhCCCCCcEEEeeCccCcCCCCCCCCC-C-------CcccEEECCCCcCCCCCccccc--C
Q 009771 278 IEYLSLGFNRFNGSIPR-EIVNLKNLTSLSLGGNKLTGHIPSTLGR-L-------TSLQILDLSSNQLHSSIPLVIG--N 346 (526)
Q Consensus 278 L~~L~L~~n~l~g~~p~-~l~~~~~L~~L~l~~n~l~~~~p~~l~~-l-------~~L~~L~Ls~n~l~~~~~~~~~--~ 346 (526)
|+.|++++|.+++ +|. .+..+++|++|++++|+++ .+|..+.. . ++|++|++++|.++ .+|..+. .
T Consensus 435 L~~L~Ls~N~l~~-lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~ 511 (636)
T 4eco_A 435 VSSINLSNNQISK-FPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATT 511 (636)
T ss_dssp EEEEECCSSCCCS-CCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTT
T ss_pred CCEEECcCCccCc-CCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhcc
Confidence 9999999999995 554 4567999999999999999 66654433 2 39999999999999 7888887 9
Q ss_pred CCCCCeecCcCCcCcccCcccccCCCCCCEEec------CCCcCcccchHHhhcCcCCCEEEccCCcCcccccccccCCC
Q 009771 347 FSALSYLDLSDNRICGIIPDELTKLSHLKYLNL------SSNLLSGQIPFAIGKLFNLASLDLSKNKLSGSIPTEIGNCS 420 (526)
Q Consensus 347 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L------~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~ 420 (526)
+++|++|++++|++++ +|..+..+++|++|++ ++|++.+.+|..++.+++|++|++++|.+ +.+|..+. +
T Consensus 512 l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~ 587 (636)
T 4eco_A 512 LPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--P 587 (636)
T ss_dssp CTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--T
T ss_pred CCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--C
Confidence 9999999999999998 8999999999999999 56888999999999999999999999999 78888766 7
Q ss_pred CCCeEEcCCCCCC
Q 009771 421 ELRNLTLNHNSLN 433 (526)
Q Consensus 421 ~L~~l~l~~n~l~ 433 (526)
+|+.|++++|++.
T Consensus 588 ~L~~L~Ls~N~l~ 600 (636)
T 4eco_A 588 NISVLDIKDNPNI 600 (636)
T ss_dssp TCCEEECCSCTTC
T ss_pred cCCEEECcCCCCc
Confidence 9999999999886
No 9
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=6.8e-39 Score=343.67 Aligned_cols=348 Identities=23% Similarity=0.283 Sum_probs=259.7
Q ss_pred CCEEEEEcCCCceecccCCCCcCCCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEE
Q 009771 76 GRITDIGLQKSNIKGELGRLNFSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLD 155 (526)
Q Consensus 76 ~~v~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~ 155 (526)
..++.+++++..... +.+..|.++++|++|++++|.+.+..|..|+++++|++|++++|.+++..|..|+++++|++|+
T Consensus 33 ~~l~~L~Ls~n~i~~-~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 111 (606)
T 3t6q_A 33 NSTECLEFSFNVLPT-IQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLF 111 (606)
T ss_dssp TTCCEEECTTCCCSE-ECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEE
T ss_pred CcCcEEEccCCccCc-CChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEee
Confidence 468889998655432 2367899999999999999999988899999999999999999999988899999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCCEEEccCCcCCccC-CcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccC--c
Q 009771 156 LGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVL-PIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLK--E 232 (526)
Q Consensus 156 L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~-p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~--~ 232 (526)
+++|.+++..|..++++++|++|++++|.+++.. |..+ .+++|++|++++|.+++..|..++.+++|+ .
T Consensus 112 L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~--------~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~ 183 (606)
T 3t6q_A 112 FIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGF--------PTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLS 183 (606)
T ss_dssp CTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTC--------CCTTCCEEECCSSCCCEECHHHHHTTTTCCSEE
T ss_pred ccccCcccCCcchhccCCcccEEECCCCcccccCccccc--------CCcccCEEEcccCcccccChhhhhhhcccceeE
Confidence 9999999776788999999999999999998743 3222 355556666655555555454455544444 3
Q ss_pred cc---------------------------------------------------------------------------ccc
Q 009771 233 LD---------------------------------------------------------------------------LSS 237 (526)
Q Consensus 233 L~---------------------------------------------------------------------------l~~ 237 (526)
|+ +++
T Consensus 184 L~l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~ 263 (606)
T 3t6q_A 184 LNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQK 263 (606)
T ss_dssp EECTTCCCCEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTT
T ss_pred EecCCCccCccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeec
Confidence 44 444
Q ss_pred cccCCCCchhhhcCcCCCeeecccccCCCCCCccccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCC
Q 009771 238 NKLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIP 317 (526)
Q Consensus 238 n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p 317 (526)
|.+++..+..++.+++|++|++++|.++ .+|..+..+++|++|++++|.+++..|..+..+++|++|++++|.+.+.+|
T Consensus 264 n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~ 342 (606)
T 3t6q_A 264 HYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELG 342 (606)
T ss_dssp CCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCC
T ss_pred CccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccc
Confidence 4444444445667778888888888776 677777888888888888888877667777778888888888887776655
Q ss_pred CC-CCCCCcccEEECCCCcCCCCC--cccccCCCCCCeecCcCCcCcccCcccccCCCCCCEEecCCCcCcccchH-Hhh
Q 009771 318 ST-LGRLTSLQILDLSSNQLHSSI--PLVIGNFSALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLLSGQIPF-AIG 393 (526)
Q Consensus 318 ~~-l~~l~~L~~L~Ls~n~l~~~~--~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~~ 393 (526)
.. +..+++|++|++++|.+++.. +..++.+++|++|++++|++.+..|..+..+++|++|++++|.+++..+. .+.
T Consensus 343 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 422 (606)
T 3t6q_A 343 TGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQ 422 (606)
T ss_dssp SSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTT
T ss_pred hhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhh
Confidence 43 677777777777777776654 55667777777777777777777677777777777777777777655443 366
Q ss_pred cCcCCCEEEccCCcCcccccccccCCCCCCeEEcCCCCCC
Q 009771 394 KLFNLASLDLSKNKLSGSIPTEIGNCSELRNLTLNHNSLN 433 (526)
Q Consensus 394 ~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~ 433 (526)
.+++|++|++++|.+.+..|..++.+++|+.|++++|.+.
T Consensus 423 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 462 (606)
T 3t6q_A 423 NLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFP 462 (606)
T ss_dssp TCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCG
T ss_pred CcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCC
Confidence 6777777777777777666666777777777777777664
No 10
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.3e-38 Score=341.40 Aligned_cols=360 Identities=25% Similarity=0.283 Sum_probs=256.9
Q ss_pred CEEEEEcCCCceecccCCCCcCCCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEc
Q 009771 77 RITDIGLQKSNIKGELGRLNFSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDL 156 (526)
Q Consensus 77 ~v~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L 156 (526)
+++.|++++..... +.+..|..+++|++|++++|.+.+..|..++++++|++|++++|.+++..|..++++++|++|++
T Consensus 58 ~L~~L~Ls~n~i~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L 136 (606)
T 3t6q_A 58 NLTFLDLTRCQIYW-IHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYL 136 (606)
T ss_dssp TCSEEECTTCCCCE-ECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEEC
T ss_pred cceEEECCCCccce-eChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEEC
Confidence 45566666433221 22445666666666666666666555666666666666666666666544455555566666666
Q ss_pred cCCCCCC------------------------CCccccCCCCCCC--EEEccCCcCCccCCcccc----------------
Q 009771 157 GSNNLNG------------------------TIPIEIGSVRNLE--TLSLDGNKLSGVLPIYFG---------------- 194 (526)
Q Consensus 157 ~~n~l~~------------------------~~p~~l~~l~~L~--~L~L~~n~l~~~~p~~~~---------------- 194 (526)
++|.+.+ ..|..++.+++|+ +|++++|.+++..|..+.
T Consensus 137 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~ 216 (606)
T 3t6q_A 137 GSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLL 216 (606)
T ss_dssp CSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTTCEEEEEECTTCSCHH
T ss_pred CCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCccChhHhhhccccccccCCchhHH
Confidence 6655554 3333344444444 444444444443332221
Q ss_pred ---------------------------------------------------cC-cccccCCCCCCEEEccCCcCCCcCch
Q 009771 195 ---------------------------------------------------TI-PIEIESLRNLQWLDLSSNKLSGTIPK 222 (526)
Q Consensus 195 ---------------------------------------------------~i-p~~l~~l~~L~~L~l~~n~l~~~~p~ 222 (526)
.+ +..++++++|++|++++|+++ .+|.
T Consensus 217 ~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~ 295 (606)
T 3t6q_A 217 VIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPS 295 (606)
T ss_dssp HHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCS
T ss_pred HHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCCh
Confidence 01 112566778888888888877 6777
Q ss_pred hhcCcCccCcccccccccCCCCchhhhcCcCCCeeecccccCCCCCCcc-ccCCCccceeecccccCCCCC--chhhhCC
Q 009771 223 EIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPST-LFRLTNIEYLSLGFNRFNGSI--PREIVNL 299 (526)
Q Consensus 223 ~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~-l~~~~~L~~L~L~~n~l~g~~--p~~l~~~ 299 (526)
.+.++++|++|++++|.+.+..|..+..+++|++|++++|.+.+.+|.. +..+++|++|++++|.+++.. +..+..+
T Consensus 296 ~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l 375 (606)
T 3t6q_A 296 GLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNL 375 (606)
T ss_dssp SCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTC
T ss_pred hhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccC
Confidence 7888888888888888888777777888888888888888887766654 777888888888888887654 6678888
Q ss_pred CCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCCCCCcc-cccCCCCCCeecCcCCcCcccCcccccCCCCCCEEe
Q 009771 300 KNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSIPL-VIGNFSALSYLDLSDNRICGIIPDELTKLSHLKYLN 378 (526)
Q Consensus 300 ~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 378 (526)
++|++|++++|.+.+..|..+..+++|++|++++|.+.+..+. .+..+++|++|++++|.+.+..|..+..+++|++|+
T Consensus 376 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 455 (606)
T 3t6q_A 376 SHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLN 455 (606)
T ss_dssp TTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEE
Confidence 8888888888888888888888888888999988888876554 377888889999999888888888888888899999
Q ss_pred cCCCcCccc---chHHhhcCcCCCEEEccCCcCcccccccccCCCCCCeEEcCCCCCCchhcc
Q 009771 379 LSSNLLSGQ---IPFAIGKLFNLASLDLSKNKLSGSIPTEIGNCSELRNLTLNHNSLNGKLAH 438 (526)
Q Consensus 379 L~~n~l~~~---~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~ 438 (526)
+++|.+++. .+..++.+++|++|++++|.+.+..|..+..+++|+.|++++|+++.....
T Consensus 456 L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 518 (606)
T 3t6q_A 456 LQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIE 518 (606)
T ss_dssp CTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGG
T ss_pred CCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChh
Confidence 999888763 235678888899999999988888888888888999999999888755443
No 11
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=4.1e-39 Score=345.39 Aligned_cols=326 Identities=23% Similarity=0.248 Sum_probs=279.6
Q ss_pred CCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEc
Q 009771 101 PNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSL 180 (526)
Q Consensus 101 ~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 180 (526)
+++++|++++|.+++..+..|.++++|++|++++|.+++..|..|+++++|++|+|++|.+++..|..|+++++|++|++
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 78999999999999888889999999999999999999888999999999999999999999888999999999999999
Q ss_pred cCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCC-cCchhhcCcCccCcccccccccCCCCchhhhcCcC------
Q 009771 181 DGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSG-TIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKS------ 253 (526)
Q Consensus 181 ~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~-~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~------ 253 (526)
++|.+++..+. .++++++|++|++++|.+.+ .+|..++++++|++|++++|.+++..|..++.+++
T Consensus 112 ~~n~l~~~~~~-------~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~ 184 (606)
T 3vq2_A 112 VETKLASLESF-------PIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNL 184 (606)
T ss_dssp TTSCCCCSSSS-------CCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCC
T ss_pred cCCcccccccc-------ccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccc
Confidence 99999876554 35789999999999999986 67999999999999999999887765544433322
Q ss_pred --------------------------------------------------------------------------------
Q 009771 254 -------------------------------------------------------------------------------- 253 (526)
Q Consensus 254 -------------------------------------------------------------------------------- 253 (526)
T Consensus 185 ~L~l~~n~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~ 264 (606)
T 3vq2_A 185 SLDMSLNPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTID 264 (606)
T ss_dssp EEECTTCCCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEE
T ss_pred eeeccCCCcceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHh
Confidence
Q ss_pred --------------------------------------------CCeeecccccCCCCCCc-------------------
Q 009771 254 --------------------------------------------LTALSMDANNLGGPIPS------------------- 270 (526)
Q Consensus 254 --------------------------------------------L~~L~l~~n~l~~~~p~------------------- 270 (526)
|+.|++++|.+ +.+|.
T Consensus 265 ~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l-~~lp~~~l~~L~~L~l~~n~~~~~ 343 (606)
T 3vq2_A 265 EFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQL-KQFPTLDLPFLKSLTLTMNKGSIS 343 (606)
T ss_dssp EEEECCCTTCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCC-SSCCCCCCSSCCEEEEESCSSCEE
T ss_pred heeccccccccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccC-cccccCCCCccceeeccCCcCccc
Confidence 22222333322 22221
Q ss_pred -cccCCCccceeecccccCCCC--CchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCCCCCc-ccccC
Q 009771 271 -TLFRLTNIEYLSLGFNRFNGS--IPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSIP-LVIGN 346 (526)
Q Consensus 271 -~l~~~~~L~~L~L~~n~l~g~--~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~-~~~~~ 346 (526)
.+..+++|++|++++|.+++. +|..+..+++|++|++++|.+.+ +|..+..+++|++|++++|.+.+..| ..+..
T Consensus 344 ~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~ 422 (606)
T 3vq2_A 344 FKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLS 422 (606)
T ss_dssp CCCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTT
T ss_pred hhhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhc
Confidence 122345666666777766654 37889999999999999999885 66889999999999999999998877 67899
Q ss_pred CCCCCeecCcCCcCcccCcccccCCCCCCEEecCCCcCcc-cchHHhhcCcCCCEEEccCCcCcccccccccCCCCCCeE
Q 009771 347 FSALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLLSG-QIPFAIGKLFNLASLDLSKNKLSGSIPTEIGNCSELRNL 425 (526)
Q Consensus 347 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l 425 (526)
+++|++|++++|.+.+..|..+..+++|++|++++|.+++ .+|..++.+++|++|++++|.+++..|..++++++|+.|
T Consensus 423 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 502 (606)
T 3vq2_A 423 LEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLL 502 (606)
T ss_dssp CTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred cccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEE
Confidence 9999999999999999999999999999999999999998 478899999999999999999999999999999999999
Q ss_pred EcCCCCCCch
Q 009771 426 TLNHNSLNGK 435 (526)
Q Consensus 426 ~l~~n~l~~~ 435 (526)
++++|+++..
T Consensus 503 ~Ls~N~l~~~ 512 (606)
T 3vq2_A 503 NMSHNNLLFL 512 (606)
T ss_dssp ECCSSCCSCE
T ss_pred ECCCCcCCCc
Confidence 9999999754
No 12
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=2.4e-39 Score=343.13 Aligned_cols=169 Identities=22% Similarity=0.318 Sum_probs=132.8
Q ss_pred CCcccceeeCCC------------CCEEEEEcCCCceecccCCCCcCCCCCCCEEeCCCCCCCCCCchhccCCCCCCEEE
Q 009771 64 HCGWVGITCDYE------------GRITDIGLQKSNIKGELGRLNFSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIY 131 (526)
Q Consensus 64 ~C~w~gv~C~~~------------~~v~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~ 131 (526)
.|.|.|+ |+.. .+++.+++++..... +.+..|..+++|++|++++|++++..|..|+++++|++|+
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 80 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITY-IGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLD 80 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCE-ECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCc-cChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEE
Confidence 4888887 7522 368888888654432 2256789999999999999999988888999999999999
Q ss_pred ccCccCCccCCcccCCCCCCCEEEccCCCCCC-CCccccCCCCCCCEEEccCCcCCccCCcccccCcccccCCCCCCEEE
Q 009771 132 LYENNLTGTIPKEIGSLRNLEVLDLGSNNLNG-TIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLD 210 (526)
Q Consensus 132 Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~-~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~ 210 (526)
+++|.+++..|..|+++++|++|++++|.+++ ..|..++++++|++|++++|.+.+.+|. ..+.++++|++|+
T Consensus 81 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~------~~~~~l~~L~~L~ 154 (549)
T 2z81_A 81 LSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRR------IDFAGLTSLNELE 154 (549)
T ss_dssp CTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECT------TTTTTCCEEEEEE
T ss_pred CCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCH------hhhhcccccCeee
Confidence 99999998777779999999999999999986 4677899999999999999986555542 2356778888888
Q ss_pred ccCCcCCCcCchhhcCcCccCccccccccc
Q 009771 211 LSSNKLSGTIPKEIGSLRNLKELDLSSNKL 240 (526)
Q Consensus 211 l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l 240 (526)
+++|++++..|..++++++|++|++++|.+
T Consensus 155 L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~ 184 (549)
T 2z81_A 155 IKALSLRNYQSQSLKSIRDIHHLTLHLSES 184 (549)
T ss_dssp EEETTCCEECTTTTTTCSEEEEEEEECSBS
T ss_pred ccCCcccccChhhhhccccCceEecccCcc
Confidence 888888877777776655555555544443
No 13
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=5e-39 Score=351.74 Aligned_cols=325 Identities=19% Similarity=0.315 Sum_probs=230.8
Q ss_pred CCCcCCCCCCCEEeCCCCCCCC-----------------CCchhcc--CCCCCCEEEccCccCCccCCcccCCCCCCCEE
Q 009771 94 RLNFSCFPNLQYLDLGSNNLSG-----------------SIPSQID--SLSNLTYIYLYENNLTGTIPKEIGSLRNLEVL 154 (526)
Q Consensus 94 ~~~~~~l~~L~~L~l~~n~~~~-----------------~~p~~l~--~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L 154 (526)
|..++++++|++|+|++|.++| .+|..++ ++++|++|+|++|.+.+.+|..|+++++|++|
T Consensus 441 P~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L 520 (876)
T 4ecn_A 441 SKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSL 520 (876)
T ss_dssp CGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEE
T ss_pred hHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEE
Confidence 5568888999999999999988 3888877 89999999999999888999889999999999
Q ss_pred EccCCC-CCC-CCccccCCCC-------CCCEEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhc
Q 009771 155 DLGSNN-LNG-TIPIEIGSVR-------NLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIG 225 (526)
Q Consensus 155 ~L~~n~-l~~-~~p~~l~~l~-------~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~ 225 (526)
+|++|+ ++| .+|..+++++ +|++|++++|.++ .+|.. ..++++++|+.|++++|+++ .+| .++
T Consensus 521 ~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~-----~~l~~L~~L~~L~Ls~N~l~-~lp-~~~ 592 (876)
T 4ecn_A 521 NIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPAS-----ASLQKMVKLGLLDCVHNKVR-HLE-AFG 592 (876)
T ss_dssp ECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCH-----HHHTTCTTCCEEECTTSCCC-BCC-CCC
T ss_pred ECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCCh-----hhhhcCCCCCEEECCCCCcc-cch-hhc
Confidence 999998 887 7887665544 8999999999887 44430 04567778888888888887 777 778
Q ss_pred CcCccCcccccccccCCCCchhhhcCcC-CCeeecccccCCCCCCccccCCCc--cceeecccccCCCCCchh---hh--
Q 009771 226 SLRNLKELDLSSNKLGGVLPQEIENLKS-LTALSMDANNLGGPIPSTLFRLTN--IEYLSLGFNRFNGSIPRE---IV-- 297 (526)
Q Consensus 226 ~l~~L~~L~l~~n~l~~~~p~~l~~l~~-L~~L~l~~n~l~~~~p~~l~~~~~--L~~L~L~~n~l~g~~p~~---l~-- 297 (526)
++++|+.|++++|.++ .+|..+..+++ |+.|++++|.++ .+|..+...+. |+.|++++|.++|.+|.. +.
T Consensus 593 ~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~ 670 (876)
T 4ecn_A 593 TNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDY 670 (876)
T ss_dssp TTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTC
T ss_pred CCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccc
Confidence 8888888888888887 67777888887 888888888877 66766665543 777777777777655421 12
Q ss_pred CCCCCcEEEeeCccCcCCCCCCC-CCCCcccEEECCCCcCCCCCcccccC--------CCCCCeecCcCCcCcccCcccc
Q 009771 298 NLKNLTSLSLGGNKLTGHIPSTL-GRLTSLQILDLSSNQLHSSIPLVIGN--------FSALSYLDLSDNRICGIIPDEL 368 (526)
Q Consensus 298 ~~~~L~~L~l~~n~l~~~~p~~l-~~l~~L~~L~Ls~n~l~~~~~~~~~~--------l~~L~~L~L~~n~l~~~~~~~~ 368 (526)
.+++|+.|++++|.+. .+|..+ ..+++|+.|++++|.++ .+|..+.. +++|++|+|++|+++ .+|..+
T Consensus 671 ~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l 747 (876)
T 4ecn_A 671 KGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDF 747 (876)
T ss_dssp CCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGG
T ss_pred cCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHh
Confidence 2336666666666666 344433 35666666666666666 44443322 226666666666666 555555
Q ss_pred c--CCCCCCEEecCCCcCcccchHHhhcCcCCCEEEccC------CcCcccccccccCCCCCCeEEcCCCCC
Q 009771 369 T--KLSHLKYLNLSSNLLSGQIPFAIGKLFNLASLDLSK------NKLSGSIPTEIGNCSELRNLTLNHNSL 432 (526)
Q Consensus 369 ~--~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~------n~l~~~~~~~~~~l~~L~~l~l~~n~l 432 (526)
. .+++|+.|+|++|++++ +|..++.+++|+.|++++ |.+.+.+|..+.++++|+.|++++|++
T Consensus 748 ~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L 818 (876)
T 4ecn_A 748 RATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI 818 (876)
T ss_dssp STTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC
T ss_pred hhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC
Confidence 5 66666666666666665 566666666666666654 556666666666666666666666666
No 14
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=5.6e-39 Score=332.18 Aligned_cols=346 Identities=24% Similarity=0.300 Sum_probs=281.7
Q ss_pred CCCCCcccc--eeeCCC---------CCEEEEEcCCCceecccCCCCcCCCCCCCEEeCCCCCCCCCC-chhccCCCCCC
Q 009771 61 TSDHCGWVG--ITCDYE---------GRITDIGLQKSNIKGELGRLNFSCFPNLQYLDLGSNNLSGSI-PSQIDSLSNLT 128 (526)
Q Consensus 61 ~~~~C~w~g--v~C~~~---------~~v~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~-p~~l~~l~~L~ 128 (526)
..+.|.|.+ +.|+.. .+++.|++++..... +.+..|.++++|++|++++|.+.+.+ +..|.++++|+
T Consensus 4 ~~~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~-~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~ 82 (455)
T 3v47_A 4 GTSECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAE-LNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLI 82 (455)
T ss_dssp ---CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCE-ECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCC
T ss_pred ccceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCc-CChhHhccCccccEEECcCCcccceECcccccccccCC
Confidence 345677666 778632 368899998654432 23678999999999999999998766 56799999999
Q ss_pred EEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccc--cCCCCCCCEEEccCCcCCccCCcccccCcccccCCCCC
Q 009771 129 YIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIE--IGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNL 206 (526)
Q Consensus 129 ~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~--l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L 206 (526)
+|++++|.+++..|..|+++++|++|+|++|.+++.+|.. +.++++|++|++++|.+++..|..+ +.++++|
T Consensus 83 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~------~~~l~~L 156 (455)
T 3v47_A 83 ILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASF------FLNMRRF 156 (455)
T ss_dssp EEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGG------GGGCTTC
T ss_pred EEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccc------cCCCCcc
Confidence 9999999999888999999999999999999999866655 8999999999999999998766531 4688999
Q ss_pred CEEEccCCcCCCcCchhhcCc--CccCcccccccccC--------------------------------CCCchhhhcC-
Q 009771 207 QWLDLSSNKLSGTIPKEIGSL--RNLKELDLSSNKLG--------------------------------GVLPQEIENL- 251 (526)
Q Consensus 207 ~~L~l~~n~l~~~~p~~l~~l--~~L~~L~l~~n~l~--------------------------------~~~p~~l~~l- 251 (526)
++|++++|++.+..+..+..+ .+|+.|++++|.+. +..|..+...
T Consensus 157 ~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~ 236 (455)
T 3v47_A 157 HVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAI 236 (455)
T ss_dssp CEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHT
T ss_pred cEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccc
Confidence 999999999998888877665 34555555555444 4444333322
Q ss_pred --cCCCeeecccccCCCC----------CCcccc--CCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCC
Q 009771 252 --KSLTALSMDANNLGGP----------IPSTLF--RLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIP 317 (526)
Q Consensus 252 --~~L~~L~l~~n~l~~~----------~p~~l~--~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p 317 (526)
++|+.|++++|...+. .+..+. ..++|+.|++++|.+++..|..+..+++|++|++++|.+.+..|
T Consensus 237 ~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 316 (455)
T 3v47_A 237 AGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDD 316 (455)
T ss_dssp TTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECT
T ss_pred cccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccCh
Confidence 4444444444432221 011111 13689999999999999899999999999999999999999889
Q ss_pred CCCCCCCcccEEECCCCcCCCCCcccccCCCCCCeecCcCCcCcccCcccccCCCCCCEEecCCCcCcccchHHhhcCcC
Q 009771 318 STLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLLSGQIPFAIGKLFN 397 (526)
Q Consensus 318 ~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~ 397 (526)
..+..+++|++|++++|.+++..|..+..+++|++|++++|++++..|..+..+++|++|++++|++++..+..+..+++
T Consensus 317 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 396 (455)
T 3v47_A 317 NAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTS 396 (455)
T ss_dssp TTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTT
T ss_pred hHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCc
Confidence 99999999999999999999888999999999999999999999999999999999999999999999877777899999
Q ss_pred CCEEEccCCcCccccc
Q 009771 398 LASLDLSKNKLSGSIP 413 (526)
Q Consensus 398 L~~L~l~~n~l~~~~~ 413 (526)
|++|++++|.+++..|
T Consensus 397 L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 397 LQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CCEEECCSSCBCCCTT
T ss_pred ccEEEccCCCcccCCC
Confidence 9999999999998776
No 15
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.3e-38 Score=332.02 Aligned_cols=338 Identities=23% Similarity=0.271 Sum_probs=221.8
Q ss_pred CCEEEEEcCCCceecccCCCCcCCCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEE
Q 009771 76 GRITDIGLQKSNIKGELGRLNFSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLD 155 (526)
Q Consensus 76 ~~v~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~ 155 (526)
.+++.+++++..... +.+..|..+++|++|++++|++++..|..|+++++|++|++++|.++ .+|.. .+++|++|+
T Consensus 21 ~~L~~L~Ls~n~i~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~ 96 (520)
T 2z7x_B 21 QKTTILNISQNYISE-LWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLD 96 (520)
T ss_dssp TTCSEEECCSSCCCC-CCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEE
T ss_pred ccccEEECCCCcccc-cChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEe
Confidence 567778887554432 11346778888888888888888777778888888888888888887 46655 778888888
Q ss_pred ccCCCCCC-CCccccCCCCCCCEEEccCCcCCccCCcccccCcccccCCCCC--CEEEccCCcC--CCcCchhhcC----
Q 009771 156 LGSNNLNG-TIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNL--QWLDLSSNKL--SGTIPKEIGS---- 226 (526)
Q Consensus 156 L~~n~l~~-~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L--~~L~l~~n~l--~~~~p~~l~~---- 226 (526)
|++|.+++ .+|..++++++|++|++++|.+++. .+..+++| ++|++++|.+ .+..|..+..
T Consensus 97 L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~----------~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~ 166 (520)
T 2z7x_B 97 LSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKS----------SVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTE 166 (520)
T ss_dssp CCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCGG----------GGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEE
T ss_pred ccCCccccccchhhhccCCcceEEEecCcccchh----------hccccccceeeEEEeecccccccccccccccccccc
Confidence 88888876 4677888888888888888887652 23455566 8888888887 5666655544
Q ss_pred ----------------------cCccCcccccccc-------cCCCCchhhhc---------------------------
Q 009771 227 ----------------------LRNLKELDLSSNK-------LGGVLPQEIEN--------------------------- 250 (526)
Q Consensus 227 ----------------------l~~L~~L~l~~n~-------l~~~~p~~l~~--------------------------- 250 (526)
+++|+.+++++|. +.+.+| .++.
T Consensus 167 ~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~ 245 (520)
T 2z7x_B 167 SLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIETTWNSFIRILQLVW 245 (520)
T ss_dssp EEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEEEHHHHHHHHHHHH
T ss_pred eEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhccccccccCHHHHHHHHHHhh
Confidence 3344444444443 111111 1111
Q ss_pred CcCCCeeecccccCCCCCCccc-----cCCCccceeecccccCCCCCc-hh-------------------------hhCC
Q 009771 251 LKSLTALSMDANNLGGPIPSTL-----FRLTNIEYLSLGFNRFNGSIP-RE-------------------------IVNL 299 (526)
Q Consensus 251 l~~L~~L~l~~n~l~~~~p~~l-----~~~~~L~~L~L~~n~l~g~~p-~~-------------------------l~~~ 299 (526)
.++|++|++++|.++|.+|..+ ..+++|+.+++++|.+ .+| .. ...+
T Consensus 246 ~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l 323 (520)
T 2z7x_B 246 HTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKI 323 (520)
T ss_dssp TSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSC
T ss_pred hCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCccccccchhhC
Confidence 2356666666777766667666 5555555555555554 222 11 1456
Q ss_pred CCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCCC--CCcccccCCCCCCeecCcCCcCcccCccc-ccCCCCCCE
Q 009771 300 KNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHS--SIPLVIGNFSALSYLDLSDNRICGIIPDE-LTKLSHLKY 376 (526)
Q Consensus 300 ~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~--~~~~~~~~l~~L~~L~L~~n~l~~~~~~~-~~~l~~L~~ 376 (526)
++|++|++++|++++.+|..++.+++|++|++++|.+++ .+|..++.+++|++|++++|.+++.+|.. +..+++|++
T Consensus 324 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~ 403 (520)
T 2z7x_B 324 SPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLS 403 (520)
T ss_dssp CCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCE
T ss_pred CcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCE
Confidence 677777777777777667777777777777777777765 45556667777777777777777645543 556667777
Q ss_pred EecCCCcCcccchHHhhcCcCCCEEEccCCcCcccccccccCCCCCCeEEcCCCCCC
Q 009771 377 LNLSSNLLSGQIPFAIGKLFNLASLDLSKNKLSGSIPTEIGNCSELRNLTLNHNSLN 433 (526)
Q Consensus 377 L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~ 433 (526)
|++++|++++.+|..+. ++|++|++++|+++ .+|..+..+++|+.|++++|+++
T Consensus 404 L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~ 457 (520)
T 2z7x_B 404 LNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK 457 (520)
T ss_dssp EECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC
T ss_pred EECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC
Confidence 77777777665555443 56777777777666 56666666677777777777665
No 16
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.1e-38 Score=337.37 Aligned_cols=351 Identities=25% Similarity=0.308 Sum_probs=255.8
Q ss_pred CCEEEEEcCCCceecccCCCCcCCCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEE
Q 009771 76 GRITDIGLQKSNIKGELGRLNFSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLD 155 (526)
Q Consensus 76 ~~v~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~ 155 (526)
.+++.|++++..... +.+..|..+++|++|++++|++++..|..|+++++|++|++++|.+++..|..|+++++|++|+
T Consensus 28 ~~l~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (570)
T 2z63_A 28 FSTKNLDLSFNPLRH-LGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (570)
T ss_dssp SSCCEEECCSCCCCE-ECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred ccccEEEccCCccCc-cChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccc
Confidence 468888888654432 2256788999999999999999887778899999999999999999887778899999999999
Q ss_pred ccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCcc----C
Q 009771 156 LGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNL----K 231 (526)
Q Consensus 156 L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L----~ 231 (526)
+++|.+++..+..++++++|++|++++|.+++. .+|..++++++|++|++++|++++..+..++.+++| +
T Consensus 107 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~------~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~ 180 (570)
T 2z63_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSF------KLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNL 180 (570)
T ss_dssp CTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCC------CCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCC
T ss_pred ccccccccCCCccccccccccEEecCCCcccee------cChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhh
Confidence 999998865555688999999999999988763 133455677888888888887776655555555544 4
Q ss_pred cccccccccCC---------------------------------------------------------------------
Q 009771 232 ELDLSSNKLGG--------------------------------------------------------------------- 242 (526)
Q Consensus 232 ~L~l~~n~l~~--------------------------------------------------------------------- 242 (526)
.+++++|.+.+
T Consensus 181 ~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~ 260 (570)
T 2z63_A 181 SLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIE 260 (570)
T ss_dssp EEECTTCCCCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEE
T ss_pred hcccCCCCceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchh
Confidence 44444443322
Q ss_pred ------------CCchhhhcCcCCCeeecccccCCCCCCccc--------------------------------------
Q 009771 243 ------------VLPQEIENLKSLTALSMDANNLGGPIPSTL-------------------------------------- 272 (526)
Q Consensus 243 ------------~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l-------------------------------------- 272 (526)
.+|..+..+++|+.|++++|.+.+ +|..+
T Consensus 261 ~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~-l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~ 339 (570)
T 2z63_A 261 EFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIER-VKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGN 339 (570)
T ss_dssp EEEEEETTEEESCSTTTTGGGTTCSEEEEESCEECS-CCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCC
T ss_pred hhhhhcchhhhhhchhhhcCcCcccEEEecCccchh-hhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCcccc
Confidence 122233334455555554444331 22111
Q ss_pred ----cCCCccceeecccccCCCCC--chhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCCCCCc-cccc
Q 009771 273 ----FRLTNIEYLSLGFNRFNGSI--PREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSIP-LVIG 345 (526)
Q Consensus 273 ----~~~~~L~~L~L~~n~l~g~~--p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~-~~~~ 345 (526)
..+++|++|++++|.+++.. |..+..+++|++|++++|.+.+..+. +..+++|++|++++|.+.+..+ ..+.
T Consensus 340 ~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~ 418 (570)
T 2z63_A 340 AFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFL 418 (570)
T ss_dssp BCCCCBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTT
T ss_pred ccccccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhh
Confidence 45678888888888887543 67788888888888888887754443 7777888888888888776655 4567
Q ss_pred CCCCCCeecCcCCcCcccCcccccCCCCCCEEecCCCcCc-ccchHHhhcCcCCCEEEccCCcCcccccccccCCCCCCe
Q 009771 346 NFSALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLLS-GQIPFAIGKLFNLASLDLSKNKLSGSIPTEIGNCSELRN 424 (526)
Q Consensus 346 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 424 (526)
.+++|++|++++|.+.+..|..+..+++|++|++++|.++ +.+|..++.+++|++|++++|.+++..|..++.+++|+.
T Consensus 419 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 498 (570)
T 2z63_A 419 SLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQV 498 (570)
T ss_dssp TCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred cCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCE
Confidence 7788888888888887777777777888888888888876 567777777888888888888887777777778888888
Q ss_pred EEcCCCCCCch
Q 009771 425 LTLNHNSLNGK 435 (526)
Q Consensus 425 l~l~~n~l~~~ 435 (526)
|++++|.++..
T Consensus 499 L~l~~n~l~~~ 509 (570)
T 2z63_A 499 LNMASNQLKSV 509 (570)
T ss_dssp EECCSSCCSCC
T ss_pred EeCCCCcCCCC
Confidence 88888877643
No 17
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-37 Score=345.15 Aligned_cols=361 Identities=23% Similarity=0.261 Sum_probs=250.1
Q ss_pred CCcccceeeCCCCCEEEEEcCCCceecccCCCCcCCCCCCCEEeCCCCCCCCCC-chhccCCCCCCEEEccCccCCccCC
Q 009771 64 HCGWVGITCDYEGRITDIGLQKSNIKGELGRLNFSCFPNLQYLDLGSNNLSGSI-PSQIDSLSNLTYIYLYENNLTGTIP 142 (526)
Q Consensus 64 ~C~w~gv~C~~~~~v~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~-p~~l~~l~~L~~L~Ls~n~~~~~ip 142 (526)
.|+|..|.+ ...+++.|+|++..... +.+..|.++++|++|++++|.+.+.+ |..|.++++|++|+|++|.+.+..|
T Consensus 13 ~~~L~~vP~-lp~~l~~LdLs~N~i~~-i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p 90 (844)
T 3j0a_A 13 FCNLTQVPQ-VLNTTERLLLSFNYIRT-VTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHP 90 (844)
T ss_dssp CCCSSCCCS-SCTTCCEEEEESCCCCE-ECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECT
T ss_pred CCCCCCCCC-CCCCcCEEECCCCcCCc-cChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCH
Confidence 356888887 56789999998654432 23678999999999999999777676 7789999999999999999998889
Q ss_pred cccCCCCCCCEEEccCCCCCCCCccc--cCCCCCCCEEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcC
Q 009771 143 KEIGSLRNLEVLDLGSNNLNGTIPIE--IGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTI 220 (526)
Q Consensus 143 ~~l~~l~~L~~L~L~~n~l~~~~p~~--l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~ 220 (526)
..|+++++|++|+|++|.+++.+|.. ++++++|++|++++|.+++..+ +..++++++|++|++++|.+++..
T Consensus 91 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~------~~~~~~L~~L~~L~Ls~N~i~~~~ 164 (844)
T 3j0a_A 91 DAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYL------HPSFGKLNSLKSIDFSSNQIFLVC 164 (844)
T ss_dssp TSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCC------CGGGGTCSSCCEEEEESSCCCCCC
T ss_pred hHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCccccccc------chhHhhCCCCCEEECCCCcCCeeC
Confidence 99999999999999999999877765 8999999999999999987643 234678999999999999998888
Q ss_pred chhhcCc--CccCcccccccccCCCCchhhhcCcC------CCeeecccccCCCCCCccccC------------------
Q 009771 221 PKEIGSL--RNLKELDLSSNKLGGVLPQEIENLKS------LTALSMDANNLGGPIPSTLFR------------------ 274 (526)
Q Consensus 221 p~~l~~l--~~L~~L~l~~n~l~~~~p~~l~~l~~------L~~L~l~~n~l~~~~p~~l~~------------------ 274 (526)
+..+..+ ++|+.|++++|.+.+..|..++.+++ |+.|++++|.+++.++..+..
T Consensus 165 ~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~ 244 (844)
T 3j0a_A 165 EHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMG 244 (844)
T ss_dssp SGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCB
T ss_pred HHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccccc
Confidence 8877776 67777777777777766655555444 666666666655444332221
Q ss_pred --------------------CCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCC
Q 009771 275 --------------------LTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSN 334 (526)
Q Consensus 275 --------------------~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n 334 (526)
.++|+.|++++|.+.+..|..+..+++|+.|++++|.+.+..|..|..+++|++|++++|
T Consensus 245 ~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N 324 (844)
T 3j0a_A 245 AGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYN 324 (844)
T ss_dssp CSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESC
T ss_pred ccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCC
Confidence 145666666666665555555566666666666666666555555666666666666666
Q ss_pred cCCCCCcccccCCCCCCeecCcCCcCcccCcccccCCCCCCEEecCCCcCccc---------------------------
Q 009771 335 QLHSSIPLVIGNFSALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLLSGQ--------------------------- 387 (526)
Q Consensus 335 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~--------------------------- 387 (526)
.+++..|..+..+++|++|++++|++.+..+..+..+++|++|++++|.+++.
T Consensus 325 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~ 404 (844)
T 3j0a_A 325 LLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTAN 404 (844)
T ss_dssp CCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCC
T ss_pred CCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCcccccccccccc
Confidence 66555555566666666666666666555555555555566555555554421
Q ss_pred -------------chHHhhcCcCCCEEEccCCcCcccccc-cccCCCCCCeEEcCCCCC
Q 009771 388 -------------IPFAIGKLFNLASLDLSKNKLSGSIPT-EIGNCSELRNLTLNHNSL 432 (526)
Q Consensus 388 -------------~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~l~l~~n~l 432 (526)
.+..++.+++|++|++++|.+++..+. .+..+++|+.|++++|.+
T Consensus 405 ~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l 463 (844)
T 3j0a_A 405 LIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENML 463 (844)
T ss_dssp EEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCC
T ss_pred eeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCcc
Confidence 122344666777777777776653322 233445555555555554
No 18
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=2.2e-37 Score=328.70 Aligned_cols=340 Identities=22% Similarity=0.258 Sum_probs=213.2
Q ss_pred CCEEEEEcCCCceecccCCCCcCCCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEE
Q 009771 76 GRITDIGLQKSNIKGELGRLNFSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLD 155 (526)
Q Consensus 76 ~~v~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~ 155 (526)
.+++.+++++..... +.+..|..+++|++|++++|.+++..|..|+++++|++|++++|.++ .+|.. .+++|++|+
T Consensus 52 ~~L~~L~Ls~N~i~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~ 127 (562)
T 3a79_B 52 PRTKALSLSQNSISE-LRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLD 127 (562)
T ss_dssp TTCCEEECCSSCCCC-CCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEE
T ss_pred CCcCEEECCCCCccc-cChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEE
Confidence 456666766544332 12345677777777777777777666666777777777777777776 45554 667777777
Q ss_pred ccCCCCCC-CCccccCCCCCCCEEEccCCcCCccCCcccccCcccccCCCCC--CEEEccCCcC--CCcCchhhcCcC--
Q 009771 156 LGSNNLNG-TIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNL--QWLDLSSNKL--SGTIPKEIGSLR-- 228 (526)
Q Consensus 156 L~~n~l~~-~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L--~~L~l~~n~l--~~~~p~~l~~l~-- 228 (526)
+++|.+++ .+|..++++++|++|++++|.+++. .+..+++| ++|++++|.+ ++..|..+..+.
T Consensus 128 Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~----------~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~ 197 (562)
T 3a79_B 128 LSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL----------DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTT 197 (562)
T ss_dssp CCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT----------TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEE
T ss_pred CCCCCccccCchHhhcccCcccEEecCCCccccC----------chhhhhhceeeEEEeecccccccccCcccccccCcc
Confidence 77777765 3456677777777777777766542 11233333 7777777776 555554444322
Q ss_pred ------------------------ccCcccccccc----------------------------cCCC----CchhhhcCc
Q 009771 229 ------------------------NLKELDLSSNK----------------------------LGGV----LPQEIENLK 252 (526)
Q Consensus 229 ------------------------~L~~L~l~~n~----------------------------l~~~----~p~~l~~l~ 252 (526)
+|+.+++++|. +.+. ++.. ...+
T Consensus 198 ~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~-~~~~ 276 (562)
T 3a79_B 198 VLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQF-FWPR 276 (562)
T ss_dssp EEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHH-HTTS
T ss_pred eEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHh-hhcc
Confidence 22222222211 0000 0000 0011
Q ss_pred CCCeeecccccCCCCCCccc-----------------------------------------------------cCCCccc
Q 009771 253 SLTALSMDANNLGGPIPSTL-----------------------------------------------------FRLTNIE 279 (526)
Q Consensus 253 ~L~~L~l~~n~l~~~~p~~l-----------------------------------------------------~~~~~L~ 279 (526)
+|++|++++|.++|.+|..+ ..+++|+
T Consensus 277 ~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~ 356 (562)
T 3a79_B 277 PVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFT 356 (562)
T ss_dssp SEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCC
T ss_pred cccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCce
Confidence 44445555555544444433 4567777
Q ss_pred eeecccccCCCCCchhhhCCCCCcEEEeeCccCcC--CCCCCCCCCCcccEEECCCCcCCCCCcc-cccCCCCCCeecCc
Q 009771 280 YLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTG--HIPSTLGRLTSLQILDLSSNQLHSSIPL-VIGNFSALSYLDLS 356 (526)
Q Consensus 280 ~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~--~~p~~l~~l~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~L~ 356 (526)
+|++++|.+++.+|..+.++++|++|++++|++++ .+|..+..+++|++|++++|.+++.+|. .+..+++|++|+++
T Consensus 357 ~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~ 436 (562)
T 3a79_B 357 FLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLS 436 (562)
T ss_dssp EEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECC
T ss_pred EEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECC
Confidence 77777777777777777777777788887777775 2345677777777888887777764444 36667777788888
Q ss_pred CCcCcccCcccccCCCCCCEEecCCCcCcccchHHhhcCcCCCEEEccCCcCccccccc-ccCCCCCCeEEcCCCCCCc
Q 009771 357 DNRICGIIPDELTKLSHLKYLNLSSNLLSGQIPFAIGKLFNLASLDLSKNKLSGSIPTE-IGNCSELRNLTLNHNSLNG 434 (526)
Q Consensus 357 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~-~~~l~~L~~l~l~~n~l~~ 434 (526)
+|++++.+|..+. ++|++|++++|+++ .+|..+..+++|++|++++|+++ .+|.. +..+++|+.+++++|++..
T Consensus 437 ~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c 511 (562)
T 3a79_B 437 SNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDC 511 (562)
T ss_dssp SSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCCBCC
T ss_pred CCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCCcCC
Confidence 8777776665443 57788888888777 56666667778888888888877 35554 7777788888888887764
No 19
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=4e-37 Score=334.38 Aligned_cols=250 Identities=28% Similarity=0.307 Sum_probs=183.0
Q ss_pred CCEEEEEcCCCceecccCCCCcCCCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEE
Q 009771 76 GRITDIGLQKSNIKGELGRLNFSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLD 155 (526)
Q Consensus 76 ~~v~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~ 155 (526)
.+++.+++++..... +.+..|.++++|++|++++|.+++..|..++++++|++|++++|.+++..+..|+++++|++|+
T Consensus 25 ~~l~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 103 (680)
T 1ziw_A 25 TNITVLNLTHNQLRR-LPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELH 103 (680)
T ss_dssp TTCSEEECCSSCCCC-CCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEE
T ss_pred CCCcEEECCCCCCCC-cCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEE
Confidence 478889998654433 2245688999999999999999988899999999999999999999865555799999999999
Q ss_pred ccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhc--CcCccCcc
Q 009771 156 LGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIG--SLRNLKEL 233 (526)
Q Consensus 156 L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~--~l~~L~~L 233 (526)
+++|.+.+..|..++++++|++|++++|.+++..|.. ++++++|++|++++|.+++..+..+. .+++|++|
T Consensus 104 L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~-------~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L 176 (680)
T 1ziw_A 104 LMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGT-------QVQLENLQELLLSNNKIQALKSEELDIFANSSLKKL 176 (680)
T ss_dssp CCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCS-------SSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEE
T ss_pred CCCCccCccChhHccccCCCCEEECCCCcccccCchh-------hcccccCCEEEccCCcccccCHHHhhccccccccEE
Confidence 9999998777788999999999999999998876654 35777888888888888776666554 44778888
Q ss_pred cccccccCCCCchhhhcC---------------------------cCCCeeecccccCCCCCCccccCCCc--cceeecc
Q 009771 234 DLSSNKLGGVLPQEIENL---------------------------KSLTALSMDANNLGGPIPSTLFRLTN--IEYLSLG 284 (526)
Q Consensus 234 ~l~~n~l~~~~p~~l~~l---------------------------~~L~~L~l~~n~l~~~~p~~l~~~~~--L~~L~L~ 284 (526)
++++|.+++..|..+..+ ++|+.|++++|.+.+..|..+..++. |++|+++
T Consensus 177 ~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls 256 (680)
T 1ziw_A 177 ELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLS 256 (680)
T ss_dssp ECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECT
T ss_pred ECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECC
Confidence 888887777666555433 34555566666666555656655543 6666666
Q ss_pred cccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCC
Q 009771 285 FNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSS 333 (526)
Q Consensus 285 ~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~ 333 (526)
+|.+++..|..+..+++|++|++++|.+.+..|..+..+++|+.|++++
T Consensus 257 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 305 (680)
T 1ziw_A 257 YNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKR 305 (680)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTT
T ss_pred CCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccc
Confidence 6666665556666666666666666666655555444444444444443
No 20
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=9.1e-37 Score=331.58 Aligned_cols=337 Identities=25% Similarity=0.281 Sum_probs=156.7
Q ss_pred CcCCCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccC--CCC
Q 009771 96 NFSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIG--SVR 173 (526)
Q Consensus 96 ~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~--~l~ 173 (526)
.|+.+++|++|++++|.+++..|..|+++++|++|++++|.+++..|..++++++|++|++++|.+++..+..+. .++
T Consensus 92 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~ 171 (680)
T 1ziw_A 92 TFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANS 171 (680)
T ss_dssp TTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTC
T ss_pred hhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccc
Confidence 355555555555555555544444555555555555555555555555555555555555555555544443322 334
Q ss_pred CCCEEEccCCcCCccCCcccccCc--------------------------------------------ccccCC--CCCC
Q 009771 174 NLETLSLDGNKLSGVLPIYFGTIP--------------------------------------------IEIESL--RNLQ 207 (526)
Q Consensus 174 ~L~~L~L~~n~l~~~~p~~~~~ip--------------------------------------------~~l~~l--~~L~ 207 (526)
+|++|++++|.+++..|..+..++ ..+.++ ++|+
T Consensus 172 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~ 251 (680)
T 1ziw_A 172 SLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLT 251 (680)
T ss_dssp EESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCC
T ss_pred cccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCC
Confidence 555555555555554444332211 111122 1255
Q ss_pred EEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCeeecccccCCC-----CCCc----cccCCCcc
Q 009771 208 WLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGG-----PIPS----TLFRLTNI 278 (526)
Q Consensus 208 ~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~-----~~p~----~l~~~~~L 278 (526)
+|++++|++++..|..|+.+++|++|++++|.+.+..|..+..+++|+.|++++|...+ .+|. .+..+++|
T Consensus 252 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L 331 (680)
T 1ziw_A 252 MLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCL 331 (680)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTC
T ss_pred EEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCC
Confidence 55555555554444445555555555555555544444444433333333333322221 1111 33344555
Q ss_pred ceeecccccCCCCCchhhhCCCCCcEEEeeCc----------------------------cCcCCCCCCCCCCCcccEEE
Q 009771 279 EYLSLGFNRFNGSIPREIVNLKNLTSLSLGGN----------------------------KLTGHIPSTLGRLTSLQILD 330 (526)
Q Consensus 279 ~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n----------------------------~l~~~~p~~l~~l~~L~~L~ 330 (526)
++|++++|.+++..+..+.++++|++|++++| ++.+..|..+..+++|++|+
T Consensus 332 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 411 (680)
T 1ziw_A 332 EHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLD 411 (680)
T ss_dssp CEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEe
Confidence 55555555555544444444444444444333 33333344455555555555
Q ss_pred CCCCcCCCCCc-ccccCCCCCCeecCcCCcCcccCcccccCCCCCCEEecCCCcCc--ccchHHhhcCcCCCEEEccCCc
Q 009771 331 LSSNQLHSSIP-LVIGNFSALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLLS--GQIPFAIGKLFNLASLDLSKNK 407 (526)
Q Consensus 331 Ls~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~--~~~~~~~~~~~~L~~L~l~~n~ 407 (526)
+++|.+++.+| ..+..+++|++|++++|++.+..+..+..+++|+.|++++|.++ +.+|..++.+++|++|++++|.
T Consensus 412 L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~ 491 (680)
T 1ziw_A 412 LGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNN 491 (680)
T ss_dssp CCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSC
T ss_pred CCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCC
Confidence 55555554333 34445555555555555544333333333333333333333332 2334444444445555555554
Q ss_pred CcccccccccCCCCCCeEEcCCCCC
Q 009771 408 LSGSIPTEIGNCSELRNLTLNHNSL 432 (526)
Q Consensus 408 l~~~~~~~~~~l~~L~~l~l~~n~l 432 (526)
+++..+..+..+++|+.|++++|.+
T Consensus 492 l~~i~~~~~~~l~~L~~L~Ls~N~l 516 (680)
T 1ziw_A 492 IANINDDMLEGLEKLEILDLQHNNL 516 (680)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CCcCChhhhccccccCEEeCCCCCc
Confidence 4444444444444444444444444
No 21
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=4e-37 Score=320.27 Aligned_cols=305 Identities=24% Similarity=0.278 Sum_probs=277.2
Q ss_pred CCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEc
Q 009771 101 PNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSL 180 (526)
Q Consensus 101 ~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 180 (526)
++++.|++++|++++..+..|.++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..+..|.++++|++|++
T Consensus 32 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 111 (477)
T 2id5_A 32 TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDI 111 (477)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEEC
T ss_pred CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEEC
Confidence 68999999999999888889999999999999999999888999999999999999999998666667899999999999
Q ss_pred cCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCeeecc
Q 009771 181 DGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMD 260 (526)
Q Consensus 181 ~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~ 260 (526)
++|.+++..|.. +.++++|++|++++|.+.+..+..|.++++|++|++++|.+++..+..+.++++|+.|+++
T Consensus 112 s~n~i~~~~~~~-------~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~ 184 (477)
T 2id5_A 112 SENKIVILLDYM-------FQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLR 184 (477)
T ss_dssp TTSCCCEECTTT-------TTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEE
T ss_pred CCCccccCChhH-------ccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCC
Confidence 999998876654 4688899999999999998888899999999999999999998887889999999999999
Q ss_pred cccCCCCCCccccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCCCCC
Q 009771 261 ANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSI 340 (526)
Q Consensus 261 ~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~ 340 (526)
+|.+.+..+..+..+++|+.|++++|.+.+.+|.......+|++|++++|.+++..+..+..+++|+.|++++|.+++..
T Consensus 185 ~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 264 (477)
T 2id5_A 185 HLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIE 264 (477)
T ss_dssp SCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEEC
T ss_pred CCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccC
Confidence 99998877788999999999999999988888887777789999999999998654467889999999999999999888
Q ss_pred cccccCCCCCCeecCcCCcCcccCcccccCCCCCCEEecCCCcCcccchHHhhcCcCCCEEEccCCcCcccc
Q 009771 341 PLVIGNFSALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLLSGQIPFAIGKLFNLASLDLSKNKLSGSI 412 (526)
Q Consensus 341 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 412 (526)
+..+..+++|++|++++|++++..|..+..+++|++|++++|++++..+..+..+++|++|++++|.+....
T Consensus 265 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c 336 (477)
T 2id5_A 265 GSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDC 336 (477)
T ss_dssp TTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSG
T ss_pred hhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCcc
Confidence 888899999999999999999999999999999999999999999877778889999999999999987643
No 22
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=2.2e-37 Score=343.52 Aligned_cols=358 Identities=24% Similarity=0.313 Sum_probs=225.4
Q ss_pred CCEEEEEcCCCceecccCCCCcCCCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcc--cCCCCCCCE
Q 009771 76 GRITDIGLQKSNIKGELGRLNFSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKE--IGSLRNLEV 153 (526)
Q Consensus 76 ~~v~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~--l~~l~~L~~ 153 (526)
..++.|++++......+.+..|.++++|++|+|++|.+.+..|..|+++++|++|+|++|.+++.+|.. |+++++|++
T Consensus 48 ~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~ 127 (844)
T 3j0a_A 48 EQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTR 127 (844)
T ss_dssp CSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCE
T ss_pred ccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCE
Confidence 467788888664444455778999999999999999999888999999999999999999999877765 899999999
Q ss_pred EEccCCCCCCCCc-cccCCCCCCCEEEccCCcCCccCCcccccC-------------------cccccCCCC------CC
Q 009771 154 LDLGSNNLNGTIP-IEIGSVRNLETLSLDGNKLSGVLPIYFGTI-------------------PIEIESLRN------LQ 207 (526)
Q Consensus 154 L~L~~n~l~~~~p-~~l~~l~~L~~L~L~~n~l~~~~p~~~~~i-------------------p~~l~~l~~------L~ 207 (526)
|+|++|.+++..+ ..++++++|++|++++|.+++..+..+..+ |..++.+.+ |+
T Consensus 128 L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~ 207 (844)
T 3j0a_A 128 LDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLE 207 (844)
T ss_dssp EEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBS
T ss_pred EECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccccchhhcCCccccCcee
Confidence 9999999987655 579999999999999999998777655321 122222222 55
Q ss_pred EEEccCCcCCCcCchhhcC--------------------------------------cCccCcccccccccCCCCchhhh
Q 009771 208 WLDLSSNKLSGTIPKEIGS--------------------------------------LRNLKELDLSSNKLGGVLPQEIE 249 (526)
Q Consensus 208 ~L~l~~n~l~~~~p~~l~~--------------------------------------l~~L~~L~l~~n~l~~~~p~~l~ 249 (526)
.|++++|.+++..+..+.. .++|+.|++++|.+.+..|..+.
T Consensus 208 ~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~ 287 (844)
T 3j0a_A 208 ILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFE 287 (844)
T ss_dssp EEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSS
T ss_pred EEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhh
Confidence 5555555554444332221 13455555555555555555555
Q ss_pred cCcCCCeeecccccCCCCCCccccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEE
Q 009771 250 NLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQIL 329 (526)
Q Consensus 250 ~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L 329 (526)
.+++|+.|++++|.+.+..|..+..+++|++|++++|.+++..|..+..+++|++|++++|.+.+..+..|..+++|++|
T Consensus 288 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L 367 (844)
T 3j0a_A 288 TLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTL 367 (844)
T ss_dssp SCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEE
T ss_pred cCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEE
Confidence 55556666666555555555555555566666666665555555555555666666666665555545555555566666
Q ss_pred ECCCCcCCCCC------------------c----------------------ccccCCCCCCeecCcCCcCcccCcc-cc
Q 009771 330 DLSSNQLHSSI------------------P----------------------LVIGNFSALSYLDLSDNRICGIIPD-EL 368 (526)
Q Consensus 330 ~Ls~n~l~~~~------------------~----------------------~~~~~l~~L~~L~L~~n~l~~~~~~-~~ 368 (526)
++++|.+++.. | ..+..+++|++|++++|++++..+. .+
T Consensus 368 ~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 447 (844)
T 3j0a_A 368 DLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTP 447 (844)
T ss_dssp EEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSS
T ss_pred ECCCCCCCcccCCCCcchhccCCCCcccccccccccceeecccCccccCchhhhhhcCCccceeeCCCCccccccccccc
Confidence 65555544210 0 0011334444444444444432211 12
Q ss_pred cCCCCCCEEecCCCcCc-----ccchHHhhcCcCCCEEEccCCcCcccccccccCCCCCCeEEcCCCCCC
Q 009771 369 TKLSHLKYLNLSSNLLS-----GQIPFAIGKLFNLASLDLSKNKLSGSIPTEIGNCSELRNLTLNHNSLN 433 (526)
Q Consensus 369 ~~l~~L~~L~L~~n~l~-----~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~ 433 (526)
..+++|+.|++++|.++ +..+..+..+++|++|++++|.+++..|..+..+++|+.|++++|.++
T Consensus 448 ~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 517 (844)
T 3j0a_A 448 SENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLT 517 (844)
T ss_dssp CSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCS
T ss_pred ccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCC
Confidence 22334444444444443 222234555666667777777777666666777777777777777765
No 23
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.1e-37 Score=320.13 Aligned_cols=319 Identities=24% Similarity=0.257 Sum_probs=287.4
Q ss_pred EeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCCcC
Q 009771 106 LDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKL 185 (526)
Q Consensus 106 L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l 185 (526)
++.++++++ .+|..+. +++++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|.++++|++|++++|.+
T Consensus 16 v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l 92 (477)
T 2id5_A 16 VLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRL 92 (477)
T ss_dssp EECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred EEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcC
Confidence 334444443 3555443 6899999999999988889999999999999999999988899999999999999999999
Q ss_pred CccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCeeecccccCC
Q 009771 186 SGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLG 265 (526)
Q Consensus 186 ~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~ 265 (526)
++..+.. +.++++|++|++++|++.+..+..|.++++|++|++++|.+.+..+..+.++++|+.|++++|.++
T Consensus 93 ~~~~~~~-------~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 165 (477)
T 2id5_A 93 KLIPLGV-------FTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLT 165 (477)
T ss_dssp CSCCTTS-------STTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCS
T ss_pred CccCccc-------ccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCc
Confidence 8654433 468899999999999999988999999999999999999999888889999999999999999999
Q ss_pred CCCCccccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCCCCCccccc
Q 009771 266 GPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSIPLVIG 345 (526)
Q Consensus 266 ~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~ 345 (526)
+..+..+..+++|+.|++++|.+.+..+..+..+++|+.|++++|.+.+.+|.......+|++|++++|.+++..+..+.
T Consensus 166 ~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~ 245 (477)
T 2id5_A 166 SIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVR 245 (477)
T ss_dssp SCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHT
T ss_pred ccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhc
Confidence 87767789999999999999999988778899999999999999999888888777778999999999999966557789
Q ss_pred CCCCCCeecCcCCcCcccCcccccCCCCCCEEecCCCcCcccchHHhhcCcCCCEEEccCCcCcccccccccCCCCCCeE
Q 009771 346 NFSALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLLSGQIPFAIGKLFNLASLDLSKNKLSGSIPTEIGNCSELRNL 425 (526)
Q Consensus 346 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l 425 (526)
.+++|++|++++|.+++..+..+..+++|++|++++|++++..|..+..+++|++|++++|.+++..+..+..+++|+.|
T Consensus 246 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 325 (477)
T 2id5_A 246 HLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETL 325 (477)
T ss_dssp TCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEE
T ss_pred CccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEE
Confidence 99999999999999998888889999999999999999999889999999999999999999998877888999999999
Q ss_pred EcCCCCCCc
Q 009771 426 TLNHNSLNG 434 (526)
Q Consensus 426 ~l~~n~l~~ 434 (526)
++++|++..
T Consensus 326 ~l~~N~l~c 334 (477)
T 2id5_A 326 ILDSNPLAC 334 (477)
T ss_dssp ECCSSCEEC
T ss_pred EccCCCccC
Confidence 999999863
No 24
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=6.2e-37 Score=322.33 Aligned_cols=333 Identities=22% Similarity=0.254 Sum_probs=264.9
Q ss_pred EEEcCCCceecccCCCCcCCCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCC
Q 009771 80 DIGLQKSNIKGELGRLNFSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSN 159 (526)
Q Consensus 80 ~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n 159 (526)
.+++++..... + +..+. ++|++|++++|.+++..|..|.++++|++|++++|.+++..|..|+++++|++|+|++|
T Consensus 4 ~l~ls~n~l~~-i-p~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 4 LVDRSKNGLIH-V-PKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp EEECTTSCCSS-C-CCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred eEecCCCCccc-c-ccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 45666544332 2 33343 89999999999999888889999999999999999999888999999999999999999
Q ss_pred CCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCcc--Ccccccc
Q 009771 160 NLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNL--KELDLSS 237 (526)
Q Consensus 160 ~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L--~~L~l~~ 237 (526)
.++ .+|.. .+++|++|++++|.+++. .+|..++++++|++|++++|.+++ ..+..+++| ++|++++
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~------~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~ 147 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDAL------PICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVL 147 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSC------CCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEE
T ss_pred cee-ecCcc--ccCCccEEeccCCccccc------cchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeec
Confidence 998 67766 899999999999999863 233456789999999999999986 356777888 9999999
Q ss_pred ccc--CCCCchhhhc--------------------------CcCCCeeeccccc-------CCCCCCccccCC-------
Q 009771 238 NKL--GGVLPQEIEN--------------------------LKSLTALSMDANN-------LGGPIPSTLFRL------- 275 (526)
Q Consensus 238 n~l--~~~~p~~l~~--------------------------l~~L~~L~l~~n~-------l~~~~p~~l~~~------- 275 (526)
|.+ .+..|..+.. +++|+.+++++|. +.+.+| .+..+
T Consensus 148 n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~ 226 (520)
T 2z7x_B 148 GETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLT 226 (520)
T ss_dssp CTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEE
T ss_pred ccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhcc
Confidence 999 7777776665 4455555555554 222222 22222
Q ss_pred --------------------CccceeecccccCCCCCchhh-----hCCCCCcEEEeeCccCcCCCCC------------
Q 009771 276 --------------------TNIEYLSLGFNRFNGSIPREI-----VNLKNLTSLSLGGNKLTGHIPS------------ 318 (526)
Q Consensus 276 --------------------~~L~~L~L~~n~l~g~~p~~l-----~~~~~L~~L~l~~n~l~~~~p~------------ 318 (526)
++|++|++++|.++|.+|..+ ..+++|+.+++++|.+ .+|.
T Consensus 227 l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L 304 (520)
T 2z7x_B 227 LNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNI 304 (520)
T ss_dssp EEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCC
T ss_pred ccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCce
Confidence 256667777777777777766 5666555555555554 2220
Q ss_pred --------------CCCCCCcccEEECCCCcCCCCCcccccCCCCCCeecCcCCcCcc--cCcccccCCCCCCEEecCCC
Q 009771 319 --------------TLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICG--IIPDELTKLSHLKYLNLSSN 382 (526)
Q Consensus 319 --------------~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~L~~n 382 (526)
.+..+++|++|++++|.+++.+|..++.+++|++|++++|++++ .+|..+..+++|++|++++|
T Consensus 305 ~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N 384 (520)
T 2z7x_B 305 KNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQN 384 (520)
T ss_dssp SEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSS
T ss_pred eEEEcCCCccccccchhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCC
Confidence 11678899999999999999899999999999999999999997 56778999999999999999
Q ss_pred cCcccchHH-hhcCcCCCEEEccCCcCcccccccccCCCCCCeEEcCCCCCC
Q 009771 383 LLSGQIPFA-IGKLFNLASLDLSKNKLSGSIPTEIGNCSELRNLTLNHNSLN 433 (526)
Q Consensus 383 ~l~~~~~~~-~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~ 433 (526)
.+++.+|.. +..+++|++|++++|.+++.+|..+. ++|+.|++++|.++
T Consensus 385 ~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~ 434 (520)
T 2z7x_B 385 SVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK 434 (520)
T ss_dssp CCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC
T ss_pred cCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc
Confidence 999867764 78889999999999999998887765 78999999999987
No 25
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.3e-36 Score=321.55 Aligned_cols=326 Identities=23% Similarity=0.225 Sum_probs=280.2
Q ss_pred CCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEc
Q 009771 101 PNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSL 180 (526)
Q Consensus 101 ~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 180 (526)
+++++|++++|.+++..+..|.++++|++|++++|.+++..|..|+++++|++|+|++|.+++..|..|+++++|++|++
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 58999999999999888889999999999999999999888888999999999999999999887889999999999999
Q ss_pred cCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCC-cCchhhcCcCccCcccccccccCCCCchhhhcCcCC----C
Q 009771 181 DGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSG-TIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSL----T 255 (526)
Q Consensus 181 ~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~-~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L----~ 255 (526)
++|.+++..+. .++++++|++|++++|.+.+ .+|..++++++|++|++++|.+++..+..++.+++| +
T Consensus 108 ~~n~l~~l~~~-------~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~ 180 (570)
T 2z63_A 108 VETNLASLENF-------PIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNL 180 (570)
T ss_dssp TTSCCCCSTTC-------SCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCC
T ss_pred cccccccCCCc-------cccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhh
Confidence 99998865432 35789999999999999987 579999999999999999999998888888888888 7
Q ss_pred eeecccccCCCC--------------------------------------------------------------------
Q 009771 256 ALSMDANNLGGP-------------------------------------------------------------------- 267 (526)
Q Consensus 256 ~L~l~~n~l~~~-------------------------------------------------------------------- 267 (526)
.+++++|.+.+.
T Consensus 181 ~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~ 260 (570)
T 2z63_A 181 SLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIE 260 (570)
T ss_dssp EEECTTCCCCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEE
T ss_pred hcccCCCCceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchh
Confidence 788877765432
Q ss_pred -------------CCccccCCCccceeecccccCCCCCchhh--------------------------------------
Q 009771 268 -------------IPSTLFRLTNIEYLSLGFNRFNGSIPREI-------------------------------------- 296 (526)
Q Consensus 268 -------------~p~~l~~~~~L~~L~L~~n~l~g~~p~~l-------------------------------------- 296 (526)
.|..+..+++|+.|++++|.+++ +|..+
T Consensus 261 ~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~-l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~ 339 (570)
T 2z63_A 261 EFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIER-VKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGN 339 (570)
T ss_dssp EEEEEETTEEESCSTTTTGGGTTCSEEEEESCEECS-CCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCC
T ss_pred hhhhhcchhhhhhchhhhcCcCcccEEEecCccchh-hhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCcccc
Confidence 23334456677777777776653 33222
Q ss_pred ----hCCCCCcEEEeeCccCcCCC--CCCCCCCCcccEEECCCCcCCCCCcccccCCCCCCeecCcCCcCcccCc-cccc
Q 009771 297 ----VNLKNLTSLSLGGNKLTGHI--PSTLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICGIIP-DELT 369 (526)
Q Consensus 297 ----~~~~~L~~L~l~~n~l~~~~--p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~ 369 (526)
..+++|++|++++|.+++.. +..+..+++|++|++++|.+.+..+. +..+++|++|++++|.+.+..+ ..+.
T Consensus 340 ~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~ 418 (570)
T 2z63_A 340 AFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFL 418 (570)
T ss_dssp BCCCCBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTT
T ss_pred ccccccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhh
Confidence 35678888888888887553 66788899999999999999865554 8999999999999999998766 5688
Q ss_pred CCCCCCEEecCCCcCcccchHHhhcCcCCCEEEccCCcCc-ccccccccCCCCCCeEEcCCCCCCch
Q 009771 370 KLSHLKYLNLSSNLLSGQIPFAIGKLFNLASLDLSKNKLS-GSIPTEIGNCSELRNLTLNHNSLNGK 435 (526)
Q Consensus 370 ~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~l~l~~n~l~~~ 435 (526)
.+++|++|++++|.+++..|..+..+++|++|++++|.+. +.+|..+..+++|+.|++++|.++..
T Consensus 419 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~ 485 (570)
T 2z63_A 419 SLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQL 485 (570)
T ss_dssp TCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEE
T ss_pred cCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccC
Confidence 9999999999999999999999999999999999999998 67899999999999999999998754
No 26
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=6.6e-36 Score=317.36 Aligned_cols=335 Identities=24% Similarity=0.277 Sum_probs=255.1
Q ss_pred EEEEcCCCceecccCCCCcCCCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccC
Q 009771 79 TDIGLQKSNIKGELGRLNFSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGS 158 (526)
Q Consensus 79 ~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~ 158 (526)
+.+++++..... + +..+ .++|++|++++|.+++..|..|.++++|++|++++|.+++..|..|+++++|++|+|++
T Consensus 34 ~~l~ls~~~L~~-i-p~~~--~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 109 (562)
T 3a79_B 34 SMVDYSNRNLTH-V-PKDL--PPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSH 109 (562)
T ss_dssp CEEECTTSCCCS-C-CTTS--CTTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTT
T ss_pred cEEEcCCCCCcc-C-CCCC--CCCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCC
Confidence 556666544332 1 2233 28999999999999988888999999999999999999988899999999999999999
Q ss_pred CCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCcc--Cccccc
Q 009771 159 NNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNL--KELDLS 236 (526)
Q Consensus 159 n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L--~~L~l~ 236 (526)
|.++ .+|.. .+++|++|++++|.+++. .+|..++++++|++|++++|++++. .+..+++| ++|+++
T Consensus 110 N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l------~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~ 177 (562)
T 3a79_B 110 NRLQ-NISCC--PMASLRHLDLSFNDFDVL------PVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLD 177 (562)
T ss_dssp SCCC-EECSC--CCTTCSEEECCSSCCSBC------CCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEE
T ss_pred CcCC-ccCcc--ccccCCEEECCCCCcccc------CchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEee
Confidence 9998 67766 899999999999999863 1234567899999999999999864 34555555 999999
Q ss_pred cccc--CCCCchhhhcCc--------------------------CCCeeeccccc-------------------------
Q 009771 237 SNKL--GGVLPQEIENLK--------------------------SLTALSMDANN------------------------- 263 (526)
Q Consensus 237 ~n~l--~~~~p~~l~~l~--------------------------~L~~L~l~~n~------------------------- 263 (526)
+|.+ ++..|..+..+. +|+.+++++|.
T Consensus 178 ~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~ 257 (562)
T 3a79_B 178 LVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQ 257 (562)
T ss_dssp ESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEE
T ss_pred cccccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEec
Confidence 9999 777776665533 44444444432
Q ss_pred ---CCCC----CCccccCCCccceeecccccCCCCCchhh----------------------------------------
Q 009771 264 ---LGGP----IPSTLFRLTNIEYLSLGFNRFNGSIPREI---------------------------------------- 296 (526)
Q Consensus 264 ---l~~~----~p~~l~~~~~L~~L~L~~n~l~g~~p~~l---------------------------------------- 296 (526)
+.+. ++.. ...++|++|++++|.++|.+|..+
T Consensus 258 ~~~l~~~~~~~~~~~-~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L 336 (562)
T 3a79_B 258 HIETTWKCSVKLFQF-FWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKML 336 (562)
T ss_dssp EEEECHHHHHHHHHH-HTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEE
T ss_pred CCcCcHHHHHHHHHh-hhcccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEE
Confidence 1000 0000 012378888888888888777654
Q ss_pred -------------hCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCCC--CCcccccCCCCCCeecCcCCcCc
Q 009771 297 -------------VNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHS--SIPLVIGNFSALSYLDLSDNRIC 361 (526)
Q Consensus 297 -------------~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~--~~~~~~~~l~~L~~L~L~~n~l~ 361 (526)
..+++|++|++++|.+++.+|..++.+++|++|++++|++++ .+|..+..+++|++|++++|+++
T Consensus 337 ~l~~n~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~ 416 (562)
T 3a79_B 337 SISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLN 416 (562)
T ss_dssp EEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCB
T ss_pred EccCCCcccccCccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCC
Confidence 566778888888888887778888888888888888888876 33456778888888888888888
Q ss_pred ccCcc-cccCCCCCCEEecCCCcCcccchHHhhcCcCCCEEEccCCcCcccccccccCCCCCCeEEcCCCCCC
Q 009771 362 GIIPD-ELTKLSHLKYLNLSSNLLSGQIPFAIGKLFNLASLDLSKNKLSGSIPTEIGNCSELRNLTLNHNSLN 433 (526)
Q Consensus 362 ~~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~ 433 (526)
+.+|. .+..+++|++|++++|++++.+|..+. ++|++|++++|+++ .+|..+..+++|+.|++++|+++
T Consensus 417 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~ 486 (562)
T 3a79_B 417 SHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK 486 (562)
T ss_dssp SCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC
T ss_pred CccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC
Confidence 75554 467778888888888888776665443 57888888888887 57777778888888888888876
No 27
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=2.4e-35 Score=317.60 Aligned_cols=378 Identities=25% Similarity=0.340 Sum_probs=280.6
Q ss_pred CCCCCCCCCCCCCCCCccc----ceeeCC----------CCCEEEEEcCCCceecccCCCCcCCCCCCCEEeCCCCCCCC
Q 009771 50 SGWWKDRIPQNTSDHCGWV----GITCDY----------EGRITDIGLQKSNIKGELGRLNFSCFPNLQYLDLGSNNLSG 115 (526)
Q Consensus 50 ~~~w~~~~~~~~~~~C~w~----gv~C~~----------~~~v~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 115 (526)
++.|....|. ..++|.+. .+.|.. ...++.|+|++...+. +++.+|.++++|++|+|++|++++
T Consensus 13 ~~~~~~~~p~-~~~~c~~~~~~~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~-l~~~~f~~l~~L~~L~Ls~N~i~~ 90 (635)
T 4g8a_A 13 LAAANSSIPE-SWEPCVEVVPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRH-LGSYSFFSFPELQVLDLSRCEIQT 90 (635)
T ss_dssp -------------CCSEEEETTTEEECTTSCCSSCCSSSCTTCCEEECTTSCCCE-ECTTTTTTCTTCCEEECTTCCCCE
T ss_pred hhcccCCCCC-CCCCccccCCCCEEECCCCCcCccCCCCCcCCCEEEeeCCCCCC-CCHHHHhCCCCCCEEECCCCcCCC
Confidence 4445444433 34567542 366852 1368899999665442 336789999999999999999998
Q ss_pred CCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCccccc
Q 009771 116 SIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGT 195 (526)
Q Consensus 116 ~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ 195 (526)
..|.+|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|+++++|++|++++|.+++. .
T Consensus 91 i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~------~ 164 (635)
T 4g8a_A 91 IEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSF------K 164 (635)
T ss_dssp ECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCC------C
T ss_pred cChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccC------C
Confidence 7778899999999999999999977777899999999999999999977677799999999999999998754 2
Q ss_pred CcccccCCCCCCEEEccCCcCCCcCchhhcCcCcc---------------------------------------------
Q 009771 196 IPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNL--------------------------------------------- 230 (526)
Q Consensus 196 ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L--------------------------------------------- 230 (526)
+|..++.+++|++|++++|++++..+..+..+.++
T Consensus 165 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~ 244 (635)
T 4g8a_A 165 LPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTC 244 (635)
T ss_dssp CCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSSHHHHHHH
T ss_pred CchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccccchhhhhhhhhcccccccccchh
Confidence 33455678888999988888776655444322211
Q ss_pred --------------------------------------------------------------------------------
Q 009771 231 -------------------------------------------------------------------------------- 230 (526)
Q Consensus 231 -------------------------------------------------------------------------------- 230 (526)
T Consensus 245 ~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~ 324 (635)
T 4g8a_A 245 IQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDF 324 (635)
T ss_dssp HHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECGGG
T ss_pred hcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhccccccccccccccccccc
Confidence
Q ss_pred ------CcccccccccCCCCc-------------------hhhhcCcCCCeeecccccCCC--CC---------------
Q 009771 231 ------KELDLSSNKLGGVLP-------------------QEIENLKSLTALSMDANNLGG--PI--------------- 268 (526)
Q Consensus 231 ------~~L~l~~n~l~~~~p-------------------~~l~~l~~L~~L~l~~n~l~~--~~--------------- 268 (526)
+.|++.+|.+.+..+ .....+++|+.++++.|.+.. ..
T Consensus 325 ~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~ 404 (635)
T 4g8a_A 325 SYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDL 404 (635)
T ss_dssp GSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEEC
T ss_pred ccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccccccccchhhccccccccccccchhhhhhhhhhhc
Confidence 111111111111000 011234567777777776542 12
Q ss_pred --------CccccCCCccceeecccccCCCCCc-hhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCC-C
Q 009771 269 --------PSTLFRLTNIEYLSLGFNRFNGSIP-REIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLH-S 338 (526)
Q Consensus 269 --------p~~l~~~~~L~~L~L~~n~l~g~~p-~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~-~ 338 (526)
+..+..+++|+.+++..+......+ ..+..+++++.++++.|.+.+..+..+..++.++.|++++|.+. +
T Consensus 405 ~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~ 484 (635)
T 4g8a_A 405 SFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN 484 (635)
T ss_dssp CSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGG
T ss_pred cccccccccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccc
Confidence 2233445566666666555443333 45677888999999999999888888899999999999999754 4
Q ss_pred CCcccccCCCCCCeecCcCCcCcccCcccccCCCCCCEEecCCCcCcccchHHhhcCcCCCEEEccCCcCcccccccccC
Q 009771 339 SIPLVIGNFSALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLLSGQIPFAIGKLFNLASLDLSKNKLSGSIPTEIGN 418 (526)
Q Consensus 339 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~ 418 (526)
..|..+..+++|++|++++|++++..|..|..+++|++|+|++|++++..+..++.+++|++|++++|++++..|..+..
T Consensus 485 ~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~ 564 (635)
T 4g8a_A 485 FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQH 564 (635)
T ss_dssp EECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTC
T ss_pred cCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHh
Confidence 57788899999999999999999999999999999999999999999888889999999999999999999999999988
Q ss_pred C-CCCCeEEcCCCCCCch
Q 009771 419 C-SELRNLTLNHNSLNGK 435 (526)
Q Consensus 419 l-~~L~~l~l~~n~l~~~ 435 (526)
+ ++|+.|++++|++...
T Consensus 565 l~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 565 FPSSLAFLNLTQNDFACT 582 (635)
T ss_dssp CCTTCCEEECTTCCBCCS
T ss_pred hhCcCCEEEeeCCCCccc
Confidence 8 5899999999998753
No 28
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=8.8e-36 Score=318.29 Aligned_cols=312 Identities=24% Similarity=0.236 Sum_probs=274.9
Q ss_pred CCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEE
Q 009771 99 CFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETL 178 (526)
Q Consensus 99 ~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 178 (526)
.+++++.+++++|.+....+..+..+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+++++|++|
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 46899999999999986666668899999999999999998888899999999999999999998888889999999999
Q ss_pred EccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCeee
Q 009771 179 SLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALS 258 (526)
Q Consensus 179 ~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~ 258 (526)
++++|.+++..+.. ++++++|++|++++|.+++..|..|+.+++|++|++++|.+++.. ++.+++|+.|+
T Consensus 129 ~L~~n~l~~l~~~~-------~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~ 198 (597)
T 3oja_B 129 VLERNDLSSLPRGI-------FHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHAN 198 (597)
T ss_dssp ECCSSCCCCCCTTT-------TTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEE
T ss_pred EeeCCCCCCCCHHH-------hccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhh
Confidence 99999998544332 368899999999999999998989999999999999999998753 56789999999
Q ss_pred cccccCCCCCCccccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCCC
Q 009771 259 MDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHS 338 (526)
Q Consensus 259 l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~ 338 (526)
+++|.+++ +....+|+.|++++|.++.. +..+ .++|+.|++++|.+++. ..++.+++|+.|++++|.+++
T Consensus 199 l~~n~l~~-----l~~~~~L~~L~ls~n~l~~~-~~~~--~~~L~~L~L~~n~l~~~--~~l~~l~~L~~L~Ls~N~l~~ 268 (597)
T 3oja_B 199 VSYNLLST-----LAIPIAVEELDASHNSINVV-RGPV--NVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEK 268 (597)
T ss_dssp CCSSCCSE-----EECCTTCSEEECCSSCCCEE-ECSC--CSCCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCE
T ss_pred cccCcccc-----ccCCchhheeeccCCccccc-cccc--CCCCCEEECCCCCCCCC--hhhccCCCCCEEECCCCccCC
Confidence 99998864 34456899999999998753 3322 37899999999999873 678999999999999999999
Q ss_pred CCcccccCCCCCCeecCcCCcCcccCcccccCCCCCCEEecCCCcCcccchHHhhcCcCCCEEEccCCcCcccccccccC
Q 009771 339 SIPLVIGNFSALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLLSGQIPFAIGKLFNLASLDLSKNKLSGSIPTEIGN 418 (526)
Q Consensus 339 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~ 418 (526)
..|..++.+++|++|++++|.+++ +|..+..+++|+.|+|++|.++ .+|..++.+++|++|++++|.+.+.. +..
T Consensus 269 ~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~---~~~ 343 (597)
T 3oja_B 269 IMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK---LST 343 (597)
T ss_dssp EESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC---CCT
T ss_pred CCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcC---hhh
Confidence 999999999999999999999987 5667778999999999999999 68888899999999999999998652 677
Q ss_pred CCCCCeEEcCCCCCCch
Q 009771 419 CSELRNLTLNHNSLNGK 435 (526)
Q Consensus 419 l~~L~~l~l~~n~l~~~ 435 (526)
+++|+.|++++|++...
T Consensus 344 ~~~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 344 HHTLKNLTLSHNDWDCN 360 (597)
T ss_dssp TCCCSEEECCSSCEEHH
T ss_pred cCCCCEEEeeCCCCCCh
Confidence 88999999999998754
No 29
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.2e-35 Score=300.90 Aligned_cols=314 Identities=24% Similarity=0.234 Sum_probs=273.4
Q ss_pred CCCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCE
Q 009771 98 SCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLET 177 (526)
Q Consensus 98 ~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 177 (526)
..+++++.|+++++.++...+..+..+++|++|++++|.+.+..+..|+.+++|++|+|++|.+++..|..++++++|++
T Consensus 42 ~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 121 (390)
T 3o6n_A 42 ITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTV 121 (390)
T ss_dssp GGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred cccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCE
Confidence 34789999999999987554455789999999999999999887889999999999999999999888888999999999
Q ss_pred EEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCee
Q 009771 178 LSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTAL 257 (526)
Q Consensus 178 L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L 257 (526)
|++++|.++...+.. +.++++|++|++++|++.+..+..++.+++|++|++++|.+++. .+..+++|+.|
T Consensus 122 L~L~~n~l~~l~~~~-------~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L 191 (390)
T 3o6n_A 122 LVLERNDLSSLPRGI-------FHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHA 191 (390)
T ss_dssp EECCSSCCCCCCTTT-------TTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEE
T ss_pred EECCCCccCcCCHHH-------hcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---cccccccccee
Confidence 999999988433221 36889999999999999988888899999999999999999865 35678999999
Q ss_pred ecccccCCCCCCccccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCC
Q 009771 258 SMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLH 337 (526)
Q Consensus 258 ~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~ 337 (526)
++++|.+++ +...++|+.|++++|.++.. |.. ..++|+.|++++|.+++. ..+..+++|++|++++|.++
T Consensus 192 ~l~~n~l~~-----~~~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~ 261 (390)
T 3o6n_A 192 NVSYNLLST-----LAIPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELE 261 (390)
T ss_dssp ECCSSCCSE-----EECCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCC
T ss_pred ecccccccc-----cCCCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCC
Confidence 999998764 33456899999999998753 432 358999999999999864 57889999999999999999
Q ss_pred CCCcccccCCCCCCeecCcCCcCcccCcccccCCCCCCEEecCCCcCcccchHHhhcCcCCCEEEccCCcCccccccccc
Q 009771 338 SSIPLVIGNFSALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLLSGQIPFAIGKLFNLASLDLSKNKLSGSIPTEIG 417 (526)
Q Consensus 338 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~ 417 (526)
+..|..+..+++|++|++++|++++ +|..+..+++|++|++++|+++ .+|..++.+++|++|++++|.+.+. + +.
T Consensus 262 ~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~-~--~~ 336 (390)
T 3o6n_A 262 KIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LS 336 (390)
T ss_dssp EEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CC
T ss_pred CcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCcccee-C--ch
Confidence 9889999999999999999999986 5666778999999999999998 5777889999999999999999864 2 67
Q ss_pred CCCCCCeEEcCCCCCCchh
Q 009771 418 NCSELRNLTLNHNSLNGKL 436 (526)
Q Consensus 418 ~l~~L~~l~l~~n~l~~~~ 436 (526)
.+++|+.|++++|++....
T Consensus 337 ~~~~L~~L~l~~N~~~~~~ 355 (390)
T 3o6n_A 337 THHTLKNLTLSHNDWDCNS 355 (390)
T ss_dssp TTCCCSEEECCSSCEEHHH
T ss_pred hhccCCEEEcCCCCccchh
Confidence 8899999999999987543
No 30
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=7.2e-35 Score=302.10 Aligned_cols=328 Identities=30% Similarity=0.473 Sum_probs=238.1
Q ss_pred CEEEEEcCCCceecccCCCCcCCCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEc
Q 009771 77 RITDIGLQKSNIKGELGRLNFSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDL 156 (526)
Q Consensus 77 ~v~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L 156 (526)
+++.+++.+..... .+.+..+++|++|++++|.+++..+ ++++++|++|++++|.+.+..| ++++++|++|++
T Consensus 47 ~l~~L~l~~~~i~~---l~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L 119 (466)
T 1o6v_A 47 QVTTLQADRLGIKS---IDGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTL 119 (466)
T ss_dssp TCCEEECCSSCCCC---CTTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred cccEEecCCCCCcc---CcchhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEEC
Confidence 45666665443322 2346667777777777777765433 7777777777777777765433 677777777777
Q ss_pred cCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccc---------------cCcccccCCCCCCEEEccCCcCCCcCc
Q 009771 157 GSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFG---------------TIPIEIESLRNLQWLDLSSNKLSGTIP 221 (526)
Q Consensus 157 ~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~---------------~ip~~l~~l~~L~~L~l~~n~l~~~~p 221 (526)
++|.+.+..+ +.++++|++|++++|.+++. +. +. .++ .+.++++|++|++++|.+.+.
T Consensus 120 ~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~l~~~~~~~~-~~~~l~~L~~L~l~~n~l~~~-- 192 (466)
T 1o6v_A 120 FNNQITDIDP--LKNLTNLNRLELSSNTISDI-SA-LSGLTSLQQLSFGNQVTDLK-PLANLTTLERLDISSNKVSDI-- 192 (466)
T ss_dssp CSSCCCCCGG--GTTCTTCSEEEEEEEEECCC-GG-GTTCTTCSEEEEEESCCCCG-GGTTCTTCCEEECCSSCCCCC--
T ss_pred CCCCCCCChH--HcCCCCCCEEECCCCccCCC-hh-hccCCcccEeecCCcccCch-hhccCCCCCEEECcCCcCCCC--
Confidence 7777764322 67777777777777776642 11 11 111 256778888888888887643
Q ss_pred hhhcCcCccCcccccccccCCCCchhhhcCcCCCeeecccccCCCCCCccccCCCccceeecccccCCCCCchhhhCCCC
Q 009771 222 KEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKN 301 (526)
Q Consensus 222 ~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~ 301 (526)
..+..+++|++|++++|.+.+..| ++.+++|+.|++++|.+.+. ..+..+++|+.|++++|.+++..+ +..+++
T Consensus 193 ~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~ 266 (466)
T 1o6v_A 193 SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTK 266 (466)
T ss_dssp GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTT
T ss_pred hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCC
Confidence 347778888888888888876654 67788888888888887653 356778888888888888876544 778888
Q ss_pred CcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCCCCCcccccCCCCCCeecCcCCcCcccCcccccCCCCCCEEecCC
Q 009771 302 LTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICGIIPDELTKLSHLKYLNLSS 381 (526)
Q Consensus 302 L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 381 (526)
|++|++++|.+.+..+ +..+++|+.|++++|.+++..+ +..+++|++|++++|++++..| +..+++|++|++++
T Consensus 267 L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~ 340 (466)
T 1o6v_A 267 LTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYN 340 (466)
T ss_dssp CSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCS
T ss_pred CCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCC
Confidence 8888888888876543 7778888888888888876544 6778888888888888887655 67788888888888
Q ss_pred CcCcccchHHhhcCcCCCEEEccCCcCcccccccccCCCCCCeEEcCCCCCCc
Q 009771 382 NLLSGQIPFAIGKLFNLASLDLSKNKLSGSIPTEIGNCSELRNLTLNHNSLNG 434 (526)
Q Consensus 382 n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~ 434 (526)
|.+++. ..+..+++|++|++++|.+++..| +..+++|+.|++++|.++.
T Consensus 341 n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 341 NKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp SCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEEC
T ss_pred CccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccC
Confidence 888864 467788888888888888887766 7788888888888887653
No 31
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=5.3e-36 Score=317.37 Aligned_cols=318 Identities=25% Similarity=0.293 Sum_probs=217.7
Q ss_pred CCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEc
Q 009771 101 PNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSL 180 (526)
Q Consensus 101 ~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 180 (526)
++|++|++++|++++..|..+.++++|++|++++|.+++..|..|+++++|++|+|++|.+++..|..++++++|++|++
T Consensus 26 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 105 (549)
T 2z81_A 26 AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNL 105 (549)
T ss_dssp TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEEC
T ss_pred CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEEC
Confidence 79999999999999888899999999999999999999988899999999999999999999888777999999999999
Q ss_pred cCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCc-hhhcCcCccCcccccccccCCCCchhhhc---------
Q 009771 181 DGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIP-KEIGSLRNLKELDLSSNKLGGVLPQEIEN--------- 250 (526)
Q Consensus 181 ~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p-~~l~~l~~L~~L~l~~n~l~~~~p~~l~~--------- 250 (526)
++|.+++. .+|..++++++|++|++++|.+.+.+| ..++++++|++|++++|.+++..|..++.
T Consensus 106 s~n~l~~~------~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l 179 (549)
T 2z81_A 106 MGNPYQTL------GVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTL 179 (549)
T ss_dssp TTCCCSSS------CSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEE
T ss_pred CCCccccc------chhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEec
Confidence 99999863 123345789999999999999655665 67999999999999999999887776654
Q ss_pred ---------------CcCCCeeecccccCCCCC--Ccc-ccCC-------------------------------------
Q 009771 251 ---------------LKSLTALSMDANNLGGPI--PST-LFRL------------------------------------- 275 (526)
Q Consensus 251 ---------------l~~L~~L~l~~n~l~~~~--p~~-l~~~------------------------------------- 275 (526)
+++|++|++++|.+++.. |.. ...+
T Consensus 180 ~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~ 259 (549)
T 2z81_A 180 HLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFD 259 (549)
T ss_dssp ECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEE
T ss_pred ccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccc
Confidence 456666666666665521 000 0001
Q ss_pred --------------------------------------------------CccceeecccccCCCCCchhh-hCCCCCcE
Q 009771 276 --------------------------------------------------TNIEYLSLGFNRFNGSIPREI-VNLKNLTS 304 (526)
Q Consensus 276 --------------------------------------------------~~L~~L~L~~n~l~g~~p~~l-~~~~~L~~ 304 (526)
.+|+.|++++|.+. .+|..+ .++++|++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~ 338 (549)
T 2z81_A 260 DCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEF 338 (549)
T ss_dssp SCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCE
T ss_pred cccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccE
Confidence 12333333333332 234333 34666666
Q ss_pred EEeeCccCcCCCC---CCCCCCCcccEEECCCCcCCCCCc--ccccCCCCCCeecCcCCcCcccCcccccCCCCCCEEec
Q 009771 305 LSLGGNKLTGHIP---STLGRLTSLQILDLSSNQLHSSIP--LVIGNFSALSYLDLSDNRICGIIPDELTKLSHLKYLNL 379 (526)
Q Consensus 305 L~l~~n~l~~~~p---~~l~~l~~L~~L~Ls~n~l~~~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 379 (526)
|++++|++.+.+| ..++.+++|++|++++|++++..+ ..+..+++|++|++++|+++ .+|..+..+++|++|++
T Consensus 339 L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~L 417 (549)
T 2z81_A 339 LDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNL 417 (549)
T ss_dssp EECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEEC
T ss_pred EEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEEC
Confidence 6666666665442 234556666666666666654321 33555666666666666665 45555555666666666
Q ss_pred CCCcCcccchHHhhcCcCCCEEEccCCcCcccccccccCCCCCCeEEcCCCCCC
Q 009771 380 SSNLLSGQIPFAIGKLFNLASLDLSKNKLSGSIPTEIGNCSELRNLTLNHNSLN 433 (526)
Q Consensus 380 ~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~ 433 (526)
++|.+++ +|..+ .++|++|++++|.+++. +..+++|+.|++++|+++
T Consensus 418 s~N~l~~-l~~~~--~~~L~~L~Ls~N~l~~~----~~~l~~L~~L~Ls~N~l~ 464 (549)
T 2z81_A 418 SSTGIRV-VKTCI--PQTLEVLDVSNNNLDSF----SLFLPRLQELYISRNKLK 464 (549)
T ss_dssp TTSCCSC-CCTTS--CTTCSEEECCSSCCSCC----CCCCTTCCEEECCSSCCS
T ss_pred CCCCccc-ccchh--cCCceEEECCCCChhhh----cccCChhcEEECCCCccC
Confidence 6666542 22211 13455555555555442 135566677777777665
No 32
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=2.6e-34 Score=286.36 Aligned_cols=307 Identities=27% Similarity=0.448 Sum_probs=253.5
Q ss_pred cCCCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCC
Q 009771 97 FSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLE 176 (526)
Q Consensus 97 ~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~ 176 (526)
+..+++|+.|+++++.+.. ++ .+..+++|++|++++|.+++ +|. +.++++|++|++++|.+++ ++ .+.++++|+
T Consensus 40 ~~~l~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~ 113 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQITD-ISP-LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLR 113 (347)
T ss_dssp HHHHTTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCS
T ss_pred chhcccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCcccc-chh-hhcCCcCCEEEccCCcccC-ch-HHcCCCcCC
Confidence 4467788899999888864 34 47888999999999998885 444 8889999999999998875 33 688899999
Q ss_pred EEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCe
Q 009771 177 TLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTA 256 (526)
Q Consensus 177 ~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~ 256 (526)
+|++++|.+++.. . +..+++|++|++++|.....++. +..+++|++|++++|.+.+..+ +..+++|+.
T Consensus 114 ~L~l~~n~i~~~~--------~-~~~l~~L~~L~l~~n~~~~~~~~-~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~ 181 (347)
T 4fmz_A 114 ELYLNEDNISDIS--------P-LANLTKMYSLNLGANHNLSDLSP-LSNMTGLNYLTVTESKVKDVTP--IANLTDLYS 181 (347)
T ss_dssp EEECTTSCCCCCG--------G-GTTCTTCCEEECTTCTTCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCSE
T ss_pred EEECcCCcccCch--------h-hccCCceeEEECCCCCCcccccc-hhhCCCCcEEEecCCCcCCchh--hccCCCCCE
Confidence 9999999887532 2 56888999999999876655544 8888999999999998876543 788899999
Q ss_pred eecccccCCCCCCccccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcC
Q 009771 257 LSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQL 336 (526)
Q Consensus 257 L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l 336 (526)
|++++|.+.+..+ +..+++|+.+++++|.+++..+ +..+++|++|++++|.+++..+ +..+++|++|++++|.+
T Consensus 182 L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l 255 (347)
T 4fmz_A 182 LSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQI 255 (347)
T ss_dssp EECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred EEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCcc
Confidence 9999998875433 7788999999999999886544 7889999999999999986543 88899999999999998
Q ss_pred CCCCcccccCCCCCCeecCcCCcCcccCcccccCCCCCCEEecCCCcCcccchHHhhcCcCCCEEEccCCcCcccccccc
Q 009771 337 HSSIPLVIGNFSALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLLSGQIPFAIGKLFNLASLDLSKNKLSGSIPTEI 416 (526)
Q Consensus 337 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~ 416 (526)
++. ..+..+++|++|++++|++++. ..+..+++|++|++++|.+++..+..++.+++|++|++++|.+++..| +
T Consensus 256 ~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~ 329 (347)
T 4fmz_A 256 SDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--L 329 (347)
T ss_dssp CCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--G
T ss_pred CCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--h
Confidence 863 4578899999999999998864 457889999999999999999999999999999999999999998766 8
Q ss_pred cCCCCCCeEEcCCCCCC
Q 009771 417 GNCSELRNLTLNHNSLN 433 (526)
Q Consensus 417 ~~l~~L~~l~l~~n~l~ 433 (526)
..+++|+.+++++|+++
T Consensus 330 ~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 330 ASLSKMDSADFANQVIK 346 (347)
T ss_dssp GGCTTCSEESSSCC---
T ss_pred hhhhccceeehhhhccc
Confidence 88999999999999874
No 33
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=8e-34 Score=292.40 Aligned_cols=297 Identities=25% Similarity=0.283 Sum_probs=213.0
Q ss_pred CCEEEEEcCCCceecccCCCCcCCCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEE
Q 009771 76 GRITDIGLQKSNIKGELGRLNFSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLD 155 (526)
Q Consensus 76 ~~v~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~ 155 (526)
.+++.+++++..... .+.+..+++|++|++++|.+++. | ++.+++|++|++++|.+++. | ++++++|++|+
T Consensus 42 ~~L~~L~Ls~n~l~~---~~~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~ 112 (457)
T 3bz5_A 42 ATLTSLDCHNSSITD---MTGIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLN 112 (457)
T ss_dssp TTCCEEECCSSCCCC---CTTGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEE
T ss_pred CCCCEEEccCCCccc---ChhhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEE
Confidence 457777777654443 23677888888888888888764 3 77888888888888888764 3 77888888888
Q ss_pred ccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccc
Q 009771 156 LGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDL 235 (526)
Q Consensus 156 L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l 235 (526)
+++|.+++ +| ++++++|++|++++|.+++. + ++++++|++|++++|+..+.+ .++.+++|++|++
T Consensus 113 L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~---------l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l 177 (457)
T 3bz5_A 113 CDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D---------VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDC 177 (457)
T ss_dssp CCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C---------CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEEC
T ss_pred CCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c---------cccCCcCCEEECCCCCccccc--ccccCCcCCEEEC
Confidence 88888875 44 77888888888888887763 1 457778888888888666555 3677788888888
Q ss_pred cccccCCCCchhhhcCcCCCeeecccccCCCCCCccccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCC
Q 009771 236 SSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGH 315 (526)
Q Consensus 236 ~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~ 315 (526)
++|++++ +| +..+++|+.|++++|.+++. .+..+++|+.|++++|++++ +| +..+++|+.|++++|++++.
T Consensus 178 s~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~ 248 (457)
T 3bz5_A 178 SFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTEL 248 (457)
T ss_dssp CSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCC
T ss_pred CCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCc
Confidence 8888876 34 67788888888888888764 36777888888888888886 55 77788888888888888876
Q ss_pred CCCCCCCCC-------cccEEECCCCcCCCCCcccccCCCCCCeecCcCCcCcccCccc--------ccCCCCCCEEecC
Q 009771 316 IPSTLGRLT-------SLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICGIIPDE--------LTKLSHLKYLNLS 380 (526)
Q Consensus 316 ~p~~l~~l~-------~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~--------~~~l~~L~~L~L~ 380 (526)
.+..+.++. +|+.|++++|.+.+.+| ++.+++|+.|++++|...+.+|.. +..+++|++|+++
T Consensus 249 ~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~ 326 (457)
T 3bz5_A 249 DVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLN 326 (457)
T ss_dssp CCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECT
T ss_pred CHHHCCCCCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECC
Confidence 544444443 34555556665555555 356777888888888766665532 3445667777777
Q ss_pred CCcCcccchHHhhcCcCCCEEEccCCcCcc
Q 009771 381 SNLLSGQIPFAIGKLFNLASLDLSKNKLSG 410 (526)
Q Consensus 381 ~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~ 410 (526)
+|++++. + ++.+++|++|++++|++++
T Consensus 327 ~N~l~~l-~--l~~l~~L~~L~l~~N~l~~ 353 (457)
T 3bz5_A 327 NTELTEL-D--VSHNTKLKSLSCVNAHIQD 353 (457)
T ss_dssp TCCCSCC-C--CTTCTTCSEEECCSSCCCB
T ss_pred CCccccc-c--cccCCcCcEEECCCCCCCC
Confidence 7777763 2 6667777777777777765
No 34
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.6e-33 Score=290.10 Aligned_cols=303 Identities=22% Similarity=0.247 Sum_probs=261.3
Q ss_pred CCcCCCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCC
Q 009771 95 LNFSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRN 174 (526)
Q Consensus 95 ~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~ 174 (526)
..++.+++|++|++++|.+++. | .++.+++|++|++++|.+++. | ++.+++|++|++++|.+++. + ++++++
T Consensus 36 ~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~ 107 (457)
T 3bz5_A 36 ISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTK 107 (457)
T ss_dssp EEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTT
T ss_pred cChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCc
Confidence 3567889999999999999874 5 799999999999999999974 4 89999999999999999874 3 889999
Q ss_pred CCEEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCC
Q 009771 175 LETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSL 254 (526)
Q Consensus 175 L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L 254 (526)
|++|++++|.+++. | ++.+++|++|++++|++++. + ++++++|++|++++|...+.+ .++.+++|
T Consensus 108 L~~L~L~~N~l~~l-~---------~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L 172 (457)
T 3bz5_A 108 LTYLNCDTNKLTKL-D---------VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQL 172 (457)
T ss_dssp CCEEECCSSCCSCC-C---------CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTC
T ss_pred CCEEECCCCcCCee-c---------CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcC
Confidence 99999999999863 2 46889999999999999974 3 789999999999999776666 47889999
Q ss_pred CeeecccccCCCCCCccccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCC
Q 009771 255 TALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSN 334 (526)
Q Consensus 255 ~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n 334 (526)
+.|++++|.+++ +| +..+++|+.|++++|.+++. .+..+++|++|++++|++++ +| ++.+++|+.|++++|
T Consensus 173 ~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N 243 (457)
T 3bz5_A 173 TTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVN 243 (457)
T ss_dssp CEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSS
T ss_pred CEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCC
Confidence 999999999987 44 78899999999999999975 38889999999999999997 55 889999999999999
Q ss_pred cCCCCCcccccCCC-------CCCeecCcCCcCcccCcccccCCCCCCEEecCCCcCcccchH--------HhhcCcCCC
Q 009771 335 QLHSSIPLVIGNFS-------ALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLLSGQIPF--------AIGKLFNLA 399 (526)
Q Consensus 335 ~l~~~~~~~~~~l~-------~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--------~~~~~~~L~ 399 (526)
++++..+..+..+. +|+.|++++|.+.+.+| ++.+++|+.|++++|...+.+|. .+..+++|+
T Consensus 244 ~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~ 321 (457)
T 3bz5_A 244 PLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLV 321 (457)
T ss_dssp CCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCC
T ss_pred cCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCC
Confidence 99986655554444 56777888888777776 46789999999999998777764 245678899
Q ss_pred EEEccCCcCcccccccccCCCCCCeEEcCCCCCCc
Q 009771 400 SLDLSKNKLSGSIPTEIGNCSELRNLTLNHNSLNG 434 (526)
Q Consensus 400 ~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~ 434 (526)
+|++++|++++. + ++++++|+.|++++|+++.
T Consensus 322 ~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~ 353 (457)
T 3bz5_A 322 YLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD 353 (457)
T ss_dssp EEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB
T ss_pred EEECCCCccccc-c--cccCCcCcEEECCCCCCCC
Confidence 999999999984 3 8899999999999999974
No 35
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=6.5e-33 Score=276.24 Aligned_cols=303 Identities=25% Similarity=0.426 Sum_probs=260.0
Q ss_pred CCEEEEEcCCCceecccCCCCcCCCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEE
Q 009771 76 GRITDIGLQKSNIKGELGRLNFSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLD 155 (526)
Q Consensus 76 ~~v~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~ 155 (526)
..++.+++++..... .+.+..+++|++|++++|.+++. +. +..+++|++|++++|.+++ + +.+.++++|++|+
T Consensus 44 ~~L~~L~l~~~~i~~---~~~~~~~~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~~-~-~~~~~l~~L~~L~ 116 (347)
T 4fmz_A 44 ESITKLVVAGEKVAS---IQGIEYLTNLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKITD-I-SALQNLTNLRELY 116 (347)
T ss_dssp TTCSEEECCSSCCCC---CTTGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCSEEE
T ss_pred ccccEEEEeCCcccc---chhhhhcCCccEEEccCCccccc-hh-hhcCCcCCEEEccCCcccC-c-hHHcCCCcCCEEE
Confidence 467788887655443 34588899999999999999864 44 9999999999999999985 4 4689999999999
Q ss_pred ccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccc
Q 009771 156 LGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDL 235 (526)
Q Consensus 156 L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l 235 (526)
+++|.+.+. +. +.++++|++|++++|.....++ .+..+++|++|++++|.+.+..+ +..+++|++|++
T Consensus 117 l~~n~i~~~-~~-~~~l~~L~~L~l~~n~~~~~~~--------~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l 184 (347)
T 4fmz_A 117 LNEDNISDI-SP-LANLTKMYSLNLGANHNLSDLS--------PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSL 184 (347)
T ss_dssp CTTSCCCCC-GG-GTTCTTCCEEECTTCTTCCCCG--------GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEEC
T ss_pred CcCCcccCc-hh-hccCCceeEEECCCCCCccccc--------chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEc
Confidence 999999854 43 8899999999999997655433 36789999999999999886544 889999999999
Q ss_pred cccccCCCCchhhhcCcCCCeeecccccCCCCCCccccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCC
Q 009771 236 SSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGH 315 (526)
Q Consensus 236 ~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~ 315 (526)
++|.+.+..+ +..+++|+.+++++|.+.+..+ +..+++|++|++++|.+++..+ +..+++|++|++++|.+++.
T Consensus 185 ~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~ 258 (347)
T 4fmz_A 185 NYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI 258 (347)
T ss_dssp TTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC
T ss_pred cCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC
Confidence 9999986533 8899999999999999886544 7889999999999999986544 88999999999999999864
Q ss_pred CCCCCCCCCcccEEECCCCcCCCCCcccccCCCCCCeecCcCCcCcccCcccccCCCCCCEEecCCCcCcccchHHhhcC
Q 009771 316 IPSTLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLLSGQIPFAIGKL 395 (526)
Q Consensus 316 ~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~ 395 (526)
..+..+++|++|++++|.+++. ..+..+++|++|++++|.+++..+..+..+++|++|++++|.+++..| +..+
T Consensus 259 --~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l 332 (347)
T 4fmz_A 259 --NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASL 332 (347)
T ss_dssp --GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGC
T ss_pred --hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhh
Confidence 5688999999999999999864 457889999999999999999999999999999999999999998766 8899
Q ss_pred cCCCEEEccCCcCc
Q 009771 396 FNLASLDLSKNKLS 409 (526)
Q Consensus 396 ~~L~~L~l~~n~l~ 409 (526)
++|++|++++|.++
T Consensus 333 ~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 333 SKMDSADFANQVIK 346 (347)
T ss_dssp TTCSEESSSCC---
T ss_pred hccceeehhhhccc
Confidence 99999999999875
No 36
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=5.9e-35 Score=288.15 Aligned_cols=284 Identities=23% Similarity=0.258 Sum_probs=202.9
Q ss_pred CCchhHHHHHHHHHHhcc-C----CCCCCCCCCCCCCCCCcccceeeCCCCCEEEEEcCCCceecccCCCCcCCCCCCCE
Q 009771 31 TNISIHVAASEIERQALL-N----SGWWKDRIPQNTSDHCGWVGITCDYEGRITDIGLQKSNIKGELGRLNFSCFPNLQY 105 (526)
Q Consensus 31 ~~~~~~~~~l~~~~~~~~-~----~~~w~~~~~~~~~~~C~w~gv~C~~~~~v~~l~l~~~~~~~~~~~~~~~~l~~L~~ 105 (526)
.....++.|+..||..+. + ...|.... ....++|.|.|+.|+.... ...-...++++.
T Consensus 23 ~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~-~~~~~~~~~~g~~~~~~~~----------------~l~~~~~~~l~~ 85 (328)
T 4fcg_A 23 TALRPYHDVLSQWQRHYNADRNRWHSAWRQAN-SNNPQIETRTGRALKATAD----------------LLEDATQPGRVA 85 (328)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHT-TTCTTSCCSHHHHHHHHHH----------------HHHHHTSTTCCE
T ss_pred ccCchHHHHHHHHHHhccCCchhhhhhhcccc-cccccccccCCcchhhhHH----------------HHhcccccceeE
Confidence 344568899999999773 3 34563111 1156899999999952100 001123567889
Q ss_pred EeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCCcC
Q 009771 106 LDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKL 185 (526)
Q Consensus 106 L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l 185 (526)
|++++|.++ .+|..++++++|++|+|++|.++ .+|..++++++|++|+|++|.++ .+|..++++++|++|++++|++
T Consensus 86 L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~ 162 (328)
T 4fcg_A 86 LELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPE 162 (328)
T ss_dssp EEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETT
T ss_pred EEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCC
Confidence 999999988 78888999999999999999998 88999999999999999999998 7898999999999999999998
Q ss_pred CccCCccccc--CcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCeeeccccc
Q 009771 186 SGVLPIYFGT--IPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANN 263 (526)
Q Consensus 186 ~~~~p~~~~~--ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~ 263 (526)
.+.+|..+.. ++..+.++++|++|++++|+++ .+|..++++++|++|++++|.+++ +|..++.+++|++|++++|.
T Consensus 163 ~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~ 240 (328)
T 4fcg_A 163 LTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCT 240 (328)
T ss_dssp CCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCT
T ss_pred ccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCc
Confidence 8888875531 2223445777777777777776 666667777777777777777764 44456667777777777766
Q ss_pred CCCCCCccccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcC
Q 009771 264 LGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQL 336 (526)
Q Consensus 264 l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l 336 (526)
+.+.+|..+..+++|++|++++|.+.+.+|..+.++++|++|++++|.+.+.+|..++++++|+.+++..+.+
T Consensus 241 ~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~ 313 (328)
T 4fcg_A 241 ALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQ 313 (328)
T ss_dssp TCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGS
T ss_pred chhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHH
Confidence 6666666666666666666666666666666666666666666666666666666666666666666554443
No 37
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.3e-32 Score=285.20 Aligned_cols=306 Identities=30% Similarity=0.463 Sum_probs=234.6
Q ss_pred CCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEE
Q 009771 99 CFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETL 178 (526)
Q Consensus 99 ~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 178 (526)
.+++++.|+++++.+.. +| .+..+++|++|++++|.+++.. + ++++++|++|++++|.+.+..+ ++++++|++|
T Consensus 44 ~l~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~-~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L 117 (466)
T 1o6v_A 44 DLDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDIT-P-LKNLTKLVDILMNNNQIADITP--LANLTNLTGL 117 (466)
T ss_dssp HHHTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCG-G-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEE
T ss_pred HhccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCch-h-hhccccCCEEECCCCccccChh--hcCCCCCCEE
Confidence 46789999999999874 55 4888999999999999998654 4 9999999999999999986554 9999999999
Q ss_pred EccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCc-------------------hhhcCcCccCcccccccc
Q 009771 179 SLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIP-------------------KEIGSLRNLKELDLSSNK 239 (526)
Q Consensus 179 ~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p-------------------~~l~~l~~L~~L~l~~n~ 239 (526)
++++|.+++..+ +.++++|++|++++|.+.+... ..++++++|++|++++|.
T Consensus 118 ~L~~n~l~~~~~---------~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~ 188 (466)
T 1o6v_A 118 TLFNNQITDIDP---------LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNK 188 (466)
T ss_dssp ECCSSCCCCCGG---------GTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSC
T ss_pred ECCCCCCCCChH---------HcCCCCCCEEECCCCccCCChhhccCCcccEeecCCcccCchhhccCCCCCEEECcCCc
Confidence 999999886422 4677888888888887764211 124556667777777777
Q ss_pred cCCCCchhhhcCcCCCeeecccccCCCCCCccccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCC
Q 009771 240 LGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPST 319 (526)
Q Consensus 240 l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~ 319 (526)
+++. ..+..+++|++|++++|.+.+..| +..+++|+.|++++|.+++. ..+..+++|+.|++++|.+.+..+
T Consensus 189 l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~-- 260 (466)
T 1o6v_A 189 VSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP-- 260 (466)
T ss_dssp CCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--
T ss_pred CCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--
Confidence 6643 236677777777777777766544 55677777777777777653 356777888888888888776544
Q ss_pred CCCCCcccEEECCCCcCCCCCcccccCCCCCCeecCcCCcCcccCcccccCCCCCCEEecCCCcCcccchHHhhcCcCCC
Q 009771 320 LGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLLSGQIPFAIGKLFNLA 399 (526)
Q Consensus 320 l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~ 399 (526)
+..+++|++|++++|.+++..+ +..+++|++|++++|++.+..+ +..+++|+.|++++|++++..| ++.+++|+
T Consensus 261 ~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~ 334 (466)
T 1o6v_A 261 LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQ 334 (466)
T ss_dssp GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCC
T ss_pred hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCC
Confidence 6777888888888888876443 6778888888888888876544 6778888888888888887655 67888888
Q ss_pred EEEccCCcCcccccccccCCCCCCeEEcCCCCCCch
Q 009771 400 SLDLSKNKLSGSIPTEIGNCSELRNLTLNHNSLNGK 435 (526)
Q Consensus 400 ~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~ 435 (526)
+|++++|.+.+. ..+..+++|+.|++++|+++..
T Consensus 335 ~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~ 368 (466)
T 1o6v_A 335 RLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDL 368 (466)
T ss_dssp EEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBC
T ss_pred EeECCCCccCCc--hhhccCCCCCEEeCCCCccCcc
Confidence 888888888765 4678888888888888888643
No 38
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=7.2e-35 Score=285.79 Aligned_cols=249 Identities=29% Similarity=0.473 Sum_probs=161.4
Q ss_pred CCCCEEEccCccCCc--cCCcccCCCCCCCEEEccC-CCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCccccc
Q 009771 125 SNLTYIYLYENNLTG--TIPKEIGSLRNLEVLDLGS-NNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIE 201 (526)
Q Consensus 125 ~~L~~L~Ls~n~~~~--~ip~~l~~l~~L~~L~L~~-n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~ 201 (526)
.++++|++++|.+.+ .+|..++++++|++|++++ |.+.+.+|..++++++|++|++++|.+++.+|.. +.
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~-------~~ 122 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDF-------LS 122 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGG-------GG
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHH-------Hh
Confidence 578888888888888 7888888888888888884 8888888888888888888888888877665543 35
Q ss_pred CCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCc-CCCeeecccccCCCCCCccccCCCccce
Q 009771 202 SLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLK-SLTALSMDANNLGGPIPSTLFRLTNIEY 280 (526)
Q Consensus 202 ~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~-~L~~L~l~~n~l~~~~p~~l~~~~~L~~ 280 (526)
++++|++|++++|.+++.+|..++++++|++|++++|.+++.+|..+..++ +|+.|++++|.+++.+|..+..++ |+.
T Consensus 123 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~ 201 (313)
T 1ogq_A 123 QIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAF 201 (313)
T ss_dssp GCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSE
T ss_pred CCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccE
Confidence 677777777777777777777777777777777777777766776666665 666666666666666665555554 666
Q ss_pred eecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCCCCCcccccCCCCCCeecCcCCcC
Q 009771 281 LSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRI 360 (526)
Q Consensus 281 L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l 360 (526)
|++++|.+++..|..+..+++|+.|++++|.+++.+|. +..+++|++|++++|.+++.+|..+..+++|++|++++|++
T Consensus 202 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 280 (313)
T 1ogq_A 202 VDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNL 280 (313)
T ss_dssp EECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEE
T ss_pred EECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcc
Confidence 66666655555555555555555555555555544433 44445555555555555544454444445555555555555
Q ss_pred cccCcccccCCCCCCEEecCCCc
Q 009771 361 CGIIPDELTKLSHLKYLNLSSNL 383 (526)
Q Consensus 361 ~~~~~~~~~~l~~L~~L~L~~n~ 383 (526)
+|.+|.. ..+++|+.+++++|.
T Consensus 281 ~~~ip~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 281 CGEIPQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp EEECCCS-TTGGGSCGGGTCSSS
T ss_pred cccCCCC-ccccccChHHhcCCC
Confidence 4444443 334444444444443
No 39
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=1.6e-32 Score=271.46 Aligned_cols=288 Identities=21% Similarity=0.295 Sum_probs=179.3
Q ss_pred CCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEcc
Q 009771 102 NLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLD 181 (526)
Q Consensus 102 ~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~ 181 (526)
+++.++++++.++ .+|..+. ++|++|++++|.+++..+..|+++++|++|+|++|.+++..|..++++++|++|+++
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 3445555555554 3343332 456666666666665555566666666666666666665556666666666666666
Q ss_pred CCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCC--CCchhhhcCcCCCeeec
Q 009771 182 GNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGG--VLPQEIENLKSLTALSM 259 (526)
Q Consensus 182 ~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~--~~p~~l~~l~~L~~L~l 259 (526)
+|.++. +|. .+ .++|++|++++|++++..+..+.++++|++|++++|.+.. ..+..+..+++|++|++
T Consensus 109 ~n~l~~-l~~-------~~--~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l 178 (330)
T 1xku_A 109 KNQLKE-LPE-------KM--PKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRI 178 (330)
T ss_dssp SSCCSB-CCS-------SC--CTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEEC
T ss_pred CCcCCc-cCh-------hh--cccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEEC
Confidence 666652 222 11 1467777777777766666666777777777777776642 45566777777777777
Q ss_pred ccccCCCCCCccccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCCCC
Q 009771 260 DANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSS 339 (526)
Q Consensus 260 ~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~ 339 (526)
++|.++. +|..+. ++|++|++++|.+++..|..+..+++|++|++++|.+++..+..+..+++|++|++++|.++ .
T Consensus 179 ~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~ 254 (330)
T 1xku_A 179 ADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-K 254 (330)
T ss_dssp CSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-S
T ss_pred CCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-c
Confidence 7777663 444333 67777888877777766777777777888888887777666667777777777777777776 5
Q ss_pred CcccccCCCCCCeecCcCCcCcccCcccccC------CCCCCEEecCCCcCcc--cchHHhhcCcCCCEEEccCC
Q 009771 340 IPLVIGNFSALSYLDLSDNRICGIIPDELTK------LSHLKYLNLSSNLLSG--QIPFAIGKLFNLASLDLSKN 406 (526)
Q Consensus 340 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~------l~~L~~L~L~~n~l~~--~~~~~~~~~~~L~~L~l~~n 406 (526)
+|..+..+++|++|++++|++++..+..+.. ...++.+++++|.+.. ..|..+..+.+++.+++++|
T Consensus 255 lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N 329 (330)
T 1xku_A 255 VPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNY 329 (330)
T ss_dssp CCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC---
T ss_pred CChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEeccc
Confidence 6666777777777777777777655554432 2344455555554431 22334444444444444443
No 40
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=7.2e-33 Score=274.14 Aligned_cols=222 Identities=28% Similarity=0.436 Sum_probs=98.5
Q ss_pred CCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEc
Q 009771 101 PNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSL 180 (526)
Q Consensus 101 ~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 180 (526)
++|++|++++|.+++..|..+.++++|++|++++|.+++..|..|+++++|++|++++|.++ .+|..+. ++|++|++
T Consensus 54 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l 130 (332)
T 2ft3_A 54 PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRI 130 (332)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEEC
Confidence 34555555555555444445555555555555555555444555555555555555555554 3333332 45555555
Q ss_pred cCCcCCccCCcccccCcccccCCCCCCEEEccCCcCC--CcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCeee
Q 009771 181 DGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLS--GTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALS 258 (526)
Q Consensus 181 ~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~--~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~ 258 (526)
++|.+++..+. .+.++++|++|++++|.++ +..+..+..+ +|++|++++|.+++ +|..+. ++|++|+
T Consensus 131 ~~n~i~~~~~~-------~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~ 199 (332)
T 2ft3_A 131 HDNRIRKVPKG-------VFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELH 199 (332)
T ss_dssp CSSCCCCCCSG-------GGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCB
T ss_pred CCCccCccCHh-------HhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEE
Confidence 55554432221 1234445555555555443 2333344444 44444444444443 222221 3444444
Q ss_pred cccccCCCCCCccccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCC
Q 009771 259 MDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLH 337 (526)
Q Consensus 259 l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~ 337 (526)
+++|.+++..+..+..+++|+.|++++|.+++..+..+..+++|++|++++|+++ .+|..+..+++|++|++++|.++
T Consensus 200 l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~ 277 (332)
T 2ft3_A 200 LDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNIT 277 (332)
T ss_dssp CCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCC
T ss_pred CCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCC
Confidence 4444444433334444444444444444444333333444444444444444433 33333333333333333333333
No 41
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.4e-32 Score=295.89 Aligned_cols=329 Identities=22% Similarity=0.261 Sum_probs=259.0
Q ss_pred CCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEc
Q 009771 101 PNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSL 180 (526)
Q Consensus 101 ~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 180 (526)
+++++|+|++|++++..+.+|.++++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..|.++++|++|++
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 48999999999999877789999999999999999999877888999999999999999999766778999999999999
Q ss_pred cCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCC-cCchhhcCcCccCcccccccccCCCCchhhhcCcCC-----
Q 009771 181 DGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSG-TIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSL----- 254 (526)
Q Consensus 181 ~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~-~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L----- 254 (526)
++|++++..+.. ++++++|++|++++|.+.+ ..|..++.+++|++|++++|++++..+..+..+.++
T Consensus 132 s~N~l~~l~~~~-------~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~ 204 (635)
T 4g8a_A 132 VETNLASLENFP-------IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNL 204 (635)
T ss_dssp TTSCCCCSTTCC-------CTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCC
T ss_pred CCCcCCCCChhh-------hhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhh
Confidence 999998765543 4789999999999999976 468889999999999999998876555444332221
Q ss_pred --------------------------------------------------------------------------------
Q 009771 255 -------------------------------------------------------------------------------- 254 (526)
Q Consensus 255 -------------------------------------------------------------------------------- 254 (526)
T Consensus 205 ~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~ 284 (635)
T 4g8a_A 205 SLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIE 284 (635)
T ss_dssp EEECTTCCCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEE
T ss_pred hhhcccCcccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhh
Confidence
Q ss_pred ----------------------------------------------CeeecccccCCCCC-------------------C
Q 009771 255 ----------------------------------------------TALSMDANNLGGPI-------------------P 269 (526)
Q Consensus 255 ----------------------------------------------~~L~l~~n~l~~~~-------------------p 269 (526)
+.|++.+|.+.+.. +
T Consensus 285 ~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~ 364 (635)
T 4g8a_A 285 EFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNA 364 (635)
T ss_dssp EEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCB
T ss_pred hhhhhhhcccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCC
Confidence 11222222211110 0
Q ss_pred ccccCCCccceeecccccCCC--CCchhh-----------------------hCCCCCcEEEeeCccCcCCC-CCCCCCC
Q 009771 270 STLFRLTNIEYLSLGFNRFNG--SIPREI-----------------------VNLKNLTSLSLGGNKLTGHI-PSTLGRL 323 (526)
Q Consensus 270 ~~l~~~~~L~~L~L~~n~l~g--~~p~~l-----------------------~~~~~L~~L~l~~n~l~~~~-p~~l~~l 323 (526)
.....+++|+.+++++|.+.. ..+..+ ..+++|+.+++..+...... +..+..+
T Consensus 365 ~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l 444 (635)
T 4g8a_A 365 FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSL 444 (635)
T ss_dssp CCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTC
T ss_pred cccccccccccchhhccccccccccccchhhhhhhhhhhccccccccccccccccccccchhhhhccccccccccccccc
Confidence 011234567777777776642 223333 34455555555555544332 2456778
Q ss_pred CcccEEECCCCcCCCCCcccccCCCCCCeecCcCCcC-cccCcccccCCCCCCEEecCCCcCcccchHHhhcCcCCCEEE
Q 009771 324 TSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRI-CGIIPDELTKLSHLKYLNLSSNLLSGQIPFAIGKLFNLASLD 402 (526)
Q Consensus 324 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l-~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~ 402 (526)
++++.++++.|.+.+..+..+..++.++.|++++|.+ .+..|..+..+++|++|+|++|++++..|..++++++|++|+
T Consensus 445 ~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~ 524 (635)
T 4g8a_A 445 RNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 524 (635)
T ss_dssp TTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred cccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEE
Confidence 8889999999999888888889999999999999974 456778899999999999999999998899999999999999
Q ss_pred ccCCcCcccccccccCCCCCCeEEcCCCCCCchh
Q 009771 403 LSKNKLSGSIPTEIGNCSELRNLTLNHNSLNGKL 436 (526)
Q Consensus 403 l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~ 436 (526)
+++|++++..|..+..+++|+.|++++|+++...
T Consensus 525 Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~ 558 (635)
T 4g8a_A 525 MSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSK 558 (635)
T ss_dssp CTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCC
T ss_pred CCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCC
Confidence 9999999988889999999999999999987543
No 42
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=6.2e-33 Score=296.23 Aligned_cols=294 Identities=21% Similarity=0.230 Sum_probs=257.7
Q ss_pred CCCcCCCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCC
Q 009771 94 RLNFSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVR 173 (526)
Q Consensus 94 ~~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~ 173 (526)
+..+..+++|++|++++|.+++..|..|+.+++|++|+|++|.+++..|..|+++++|++|+|++|.+++..+..|++++
T Consensus 68 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~ 147 (597)
T 3oja_B 68 AALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTP 147 (597)
T ss_dssp THHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred HHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCC
Confidence 44577899999999999999988888999999999999999999998888899999999999999999965555679999
Q ss_pred CCCEEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcC
Q 009771 174 NLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKS 253 (526)
Q Consensus 174 ~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~ 253 (526)
+|++|++++|.+++..|.. ++++++|++|++++|.+++.. ++.+++|+.|++++|.+++ +...++
T Consensus 148 ~L~~L~Ls~N~l~~~~~~~-------~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~-----l~~~~~ 212 (597)
T 3oja_B 148 KLTTLSMSNNNLERIEDDT-------FQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLST-----LAIPIA 212 (597)
T ss_dssp TCCEEECCSSCCCBCCTTT-------TTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSE-----EECCTT
T ss_pred CCCEEEeeCCcCCCCChhh-------hhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCcccc-----ccCCch
Confidence 9999999999999876654 468899999999999998753 5678899999999998875 344568
Q ss_pred CCeeecccccCCCCCCccccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCC
Q 009771 254 LTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSS 333 (526)
Q Consensus 254 L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~ 333 (526)
|+.|++++|.+....+. + .++|+.|++++|.+++. ..+..+++|+.|++++|.+.+..|..++.+++|+.|++++
T Consensus 213 L~~L~ls~n~l~~~~~~-~--~~~L~~L~L~~n~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 287 (597)
T 3oja_B 213 VEELDASHNSINVVRGP-V--NVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISN 287 (597)
T ss_dssp CSEEECCSSCCCEEECS-C--CSCCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTT
T ss_pred hheeeccCCcccccccc-c--CCCCCEEECCCCCCCCC--hhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCC
Confidence 99999999998743322 2 36899999999999873 6789999999999999999999999999999999999999
Q ss_pred CcCCCCCcccccCCCCCCeecCcCCcCcccCcccccCCCCCCEEecCCCcCcccchHHhhcCcCCCEEEccCCcCcccc
Q 009771 334 NQLHSSIPLVIGNFSALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLLSGQIPFAIGKLFNLASLDLSKNKLSGSI 412 (526)
Q Consensus 334 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 412 (526)
|.+++ +|..+..+++|+.|++++|.++ .+|..+..+++|++|++++|.+++. + ++.+++|++|++++|.+.+..
T Consensus 288 N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~~~ 361 (597)
T 3oja_B 288 NRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNS 361 (597)
T ss_dssp SCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHH
T ss_pred CCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc-C--hhhcCCCCEEEeeCCCCCChh
Confidence 99986 5667788999999999999998 5777888899999999999999864 3 677899999999999998753
No 43
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1e-32 Score=279.40 Aligned_cols=309 Identities=20% Similarity=0.238 Sum_probs=260.6
Q ss_pred EEEEEcCCCceecccCCCCcCCCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEcc
Q 009771 78 ITDIGLQKSNIKGELGRLNFSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLG 157 (526)
Q Consensus 78 v~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~ 157 (526)
++.+++++.... .+++..+..+++|++|++++|.+++..+..+..+++|++|++++|.+++..|..|+++++|++|+++
T Consensus 47 l~~l~l~~~~l~-~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 125 (390)
T 3o6n_A 47 QKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLE 125 (390)
T ss_dssp CSEEEEESCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred ceEEEecCCchh-hCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECC
Confidence 444444433322 2223447889999999999999998777899999999999999999998888889999999999999
Q ss_pred CCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccc
Q 009771 158 SNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSS 237 (526)
Q Consensus 158 ~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~ 237 (526)
+|.++...+..+.++++|++|++++|.+++..|.. +..+++|++|++++|++++. .++.+++|+.|++++
T Consensus 126 ~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~-------~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~ 195 (390)
T 3o6n_A 126 RNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDT-------FQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSY 195 (390)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTT-------TSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCS
T ss_pred CCccCcCCHHHhcCCCCCcEEECCCCccCccChhh-------ccCCCCCCEEECCCCcCCcc---ccccccccceeeccc
Confidence 99998544444789999999999999998765543 46889999999999999865 356789999999999
Q ss_pred cccCCCCchhhhcCcCCCeeecccccCCCCCCccccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCC
Q 009771 238 NKLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIP 317 (526)
Q Consensus 238 n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p 317 (526)
|.+++ +...++|+.|++++|.+... |.. ..++|+.|++++|.+++. ..+..+++|++|++++|.+.+..|
T Consensus 196 n~l~~-----~~~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~ 265 (390)
T 3o6n_A 196 NLLST-----LAIPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMY 265 (390)
T ss_dssp SCCSE-----EECCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEES
T ss_pred ccccc-----cCCCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcCh
Confidence 98874 23456899999999998754 332 357899999999999864 578999999999999999999889
Q ss_pred CCCCCCCcccEEECCCCcCCCCCcccccCCCCCCeecCcCCcCcccCcccccCCCCCCEEecCCCcCcccchHHhhcCcC
Q 009771 318 STLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLLSGQIPFAIGKLFN 397 (526)
Q Consensus 318 ~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~ 397 (526)
..+..+++|++|++++|.+++ +|..+..+++|++|++++|++. .+|..+..+++|++|++++|.+++. + +..+++
T Consensus 266 ~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~-~--~~~~~~ 340 (390)
T 3o6n_A 266 HPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHT 340 (390)
T ss_dssp GGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCC
T ss_pred hHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCcccee-C--chhhcc
Confidence 999999999999999999986 5666678999999999999998 5677788899999999999999854 3 778899
Q ss_pred CCEEEccCCcCcccc
Q 009771 398 LASLDLSKNKLSGSI 412 (526)
Q Consensus 398 L~~L~l~~n~l~~~~ 412 (526)
|++|++++|.+.+..
T Consensus 341 L~~L~l~~N~~~~~~ 355 (390)
T 3o6n_A 341 LKNLTLSHNDWDCNS 355 (390)
T ss_dssp CSEEECCSSCEEHHH
T ss_pred CCEEEcCCCCccchh
Confidence 999999999998753
No 44
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=2.8e-32 Score=269.95 Aligned_cols=289 Identities=20% Similarity=0.322 Sum_probs=200.7
Q ss_pred CCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEE
Q 009771 100 FPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLS 179 (526)
Q Consensus 100 l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ 179 (526)
..+++.++++++.++ .+|..+. ++|++|++++|.+.+..|..|.++++|++|++++|.+++..|..++++++|++|+
T Consensus 32 ~c~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 108 (332)
T 2ft3_A 32 HCHLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLY 108 (332)
T ss_dssp EEETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEE
T ss_pred cccCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEE
Confidence 347899999998887 5676653 6899999999999877777889999999999999999887788899999999999
Q ss_pred ccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccC--CCCchhhhcCcCCCee
Q 009771 180 LDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLG--GVLPQEIENLKSLTAL 257 (526)
Q Consensus 180 L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~--~~~p~~l~~l~~L~~L 257 (526)
+++|.++. +|. .+. ++|++|++++|++++..+..+.++++|++|++++|.++ +..+..+..+ +|+.|
T Consensus 109 L~~n~l~~-l~~-------~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L 177 (332)
T 2ft3_A 109 ISKNHLVE-IPP-------NLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYL 177 (332)
T ss_dssp CCSSCCCS-CCS-------SCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCC
T ss_pred CCCCcCCc-cCc-------ccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEE
Confidence 99998873 332 222 68889999998888766667888888888888888875 3556666666 77888
Q ss_pred ecccccCCCCCCccccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCC
Q 009771 258 SMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLH 337 (526)
Q Consensus 258 ~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~ 337 (526)
++++|.+++ +|..+. ++|++|++++|.+++..+..+..+++|++|++++|.+.+..+..+..+++|++|++++|.++
T Consensus 178 ~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 254 (332)
T 2ft3_A 178 RISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS 254 (332)
T ss_dssp BCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC
T ss_pred ECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe
Confidence 888777765 454433 56777777777777666666777777777777777777665556666677777777777666
Q ss_pred CCCcccccCCCCCCeecCcCCcCcccCcccccCC------CCCCEEecCCCcCc--ccchHHhhcCcCCCEEEccCC
Q 009771 338 SSIPLVIGNFSALSYLDLSDNRICGIIPDELTKL------SHLKYLNLSSNLLS--GQIPFAIGKLFNLASLDLSKN 406 (526)
Q Consensus 338 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l------~~L~~L~L~~n~l~--~~~~~~~~~~~~L~~L~l~~n 406 (526)
.+|..+..+++|++|++++|++++..+..+... ..|+.|++++|.+. +..|..+..+++|+.+++++|
T Consensus 255 -~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n 330 (332)
T 2ft3_A 255 -RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNY 330 (332)
T ss_dssp -BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC---
T ss_pred -ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhcccc
Confidence 556566666666677776666665544444321 33444444444443 233333444444444444433
No 45
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=1.3e-31 Score=265.00 Aligned_cols=291 Identities=22% Similarity=0.303 Sum_probs=247.3
Q ss_pred CCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCcccccCC
Q 009771 124 LSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESL 203 (526)
Q Consensus 124 l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l 203 (526)
..+|++++++++.++ .+|..+. ++|++|++++|.+++..+..++++++|++|++++|.+++..|.. ++++
T Consensus 30 ~c~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~-------~~~l 99 (330)
T 1xku_A 30 QCHLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGA-------FAPL 99 (330)
T ss_dssp EEETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTT-------TTTC
T ss_pred cCCCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHH-------hcCC
Confidence 347999999999987 5776654 78999999999999877778999999999999999999776654 4688
Q ss_pred CCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCeeecccccCCC--CCCccccCCCcccee
Q 009771 204 RNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGG--PIPSTLFRLTNIEYL 281 (526)
Q Consensus 204 ~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~--~~p~~l~~~~~L~~L 281 (526)
++|++|++++|+++ .+|..+. ++|++|++++|.+++..+..+.++++|+.|++++|.+.. ..+..+..+++|++|
T Consensus 100 ~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L 176 (330)
T 1xku_A 100 VKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYI 176 (330)
T ss_dssp TTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEE
T ss_pred CCCCEEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEE
Confidence 99999999999998 5666554 789999999999998888889999999999999999863 667788899999999
Q ss_pred ecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCCCCCcccccCCCCCCeecCcCCcCc
Q 009771 282 SLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRIC 361 (526)
Q Consensus 282 ~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 361 (526)
++++|.++. +|..+. ++|++|++++|.+++..|..+..+++|++|++++|.+++..+..+..+++|++|++++|+++
T Consensus 177 ~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 253 (330)
T 1xku_A 177 RIADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV 253 (330)
T ss_dssp ECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS
T ss_pred ECCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc
Confidence 999999885 565443 88999999999999888888999999999999999999888878889999999999999998
Q ss_pred ccCcccccCCCCCCEEecCCCcCcccchHHhhc------CcCCCEEEccCCcCcc--cccccccCCCCCCeEEcCCCC
Q 009771 362 GIIPDELTKLSHLKYLNLSSNLLSGQIPFAIGK------LFNLASLDLSKNKLSG--SIPTEIGNCSELRNLTLNHNS 431 (526)
Q Consensus 362 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~------~~~L~~L~l~~n~l~~--~~~~~~~~l~~L~~l~l~~n~ 431 (526)
.+|..+..+++|++|++++|.+++..+..+.. ...++.+++++|.+.. ..|..+..+..++.+++++|+
T Consensus 254 -~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 254 -KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp -SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred -cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 78888899999999999999998766665543 3678899999998864 456778888999999999874
No 46
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.98 E-value=1.4e-30 Score=267.93 Aligned_cols=288 Identities=27% Similarity=0.400 Sum_probs=137.2
Q ss_pred CCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEc
Q 009771 101 PNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSL 180 (526)
Q Consensus 101 ~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 180 (526)
++|++|++++|.+++ +|.. +++|++|++++|.+++ +|.. .++|++|++++|.+++ +| .++++++|++|++
T Consensus 91 ~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l 160 (454)
T 1jl5_A 91 PHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDV 160 (454)
T ss_dssp TTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEEC
Confidence 456666666666655 4432 2556666666665553 2221 1456666666666654 44 4566666666666
Q ss_pred cCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCeeecc
Q 009771 181 DGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMD 260 (526)
Q Consensus 181 ~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~ 260 (526)
++|++++ +|.. ..+|++|++++|++++ +| .++++++|++|++++|.+++ +|.. .++|++|+++
T Consensus 161 ~~N~l~~-lp~~----------~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~ 223 (454)
T 1jl5_A 161 DNNSLKK-LPDL----------PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDL---PLSLESIVAG 223 (454)
T ss_dssp CSSCCSC-CCCC----------CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCC---CTTCCEEECC
T ss_pred CCCcCcc-cCCC----------cccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCC---cCcccEEECc
Confidence 6666553 2221 1255555555555554 33 35555555555555555554 2221 1355555555
Q ss_pred cccCCCCCCccccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCCC--
Q 009771 261 ANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHS-- 338 (526)
Q Consensus 261 ~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~-- 338 (526)
+|.++ .+| .+..+++|++|++++|++++ +|.. +++|++|++++|++++ +|.. +++|++|++++|.+++
T Consensus 224 ~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l~ 293 (454)
T 1jl5_A 224 NNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGLS 293 (454)
T ss_dssp SSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEES
T ss_pred CCcCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCccc
Confidence 55554 344 25555555555555555553 3321 2455555555555553 3322 2445555555555543
Q ss_pred CCccc-------------ccCC-CCCCeecCcCCcCcccCcccccCCCCCCEEecCCCcCcccchHHhhcCcCCCEEEcc
Q 009771 339 SIPLV-------------IGNF-SALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLLSGQIPFAIGKLFNLASLDLS 404 (526)
Q Consensus 339 ~~~~~-------------~~~l-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~ 404 (526)
.+|.. +..+ ++|++|++++|++++ +|.. +++|++|++++|+++ .+|. .+++|++|+++
T Consensus 294 ~~~~~L~~L~l~~N~l~~i~~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~ 365 (454)
T 1jl5_A 294 ELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVE 365 (454)
T ss_dssp CCCTTCCEEECCSSCCSEECCCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECC
T ss_pred CcCCcCCEEECcCCcCCcccCCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCccc-cccc---hhhhccEEECC
Confidence 11100 0111 345555555555554 3322 345555555555555 2333 24555555555
Q ss_pred CCcCcc--cccccccCC-------------CCCCeEEcCCCCCC
Q 009771 405 KNKLSG--SIPTEIGNC-------------SELRNLTLNHNSLN 433 (526)
Q Consensus 405 ~n~l~~--~~~~~~~~l-------------~~L~~l~l~~n~l~ 433 (526)
+|++++ .+|..+.++ ++|+.|++++|+++
T Consensus 366 ~N~l~~l~~ip~~l~~L~~n~~~~~i~~~~~~L~~L~ls~N~l~ 409 (454)
T 1jl5_A 366 YNPLREFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLR 409 (454)
T ss_dssp SSCCSSCCCCCTTCCEEECCC-----------------------
T ss_pred CCCCCcCCCChHHHHhhhhcccccccccccCcCCEEECCCCcCC
Confidence 555555 455555444 45555555555554
No 47
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.97 E-value=3.7e-31 Score=272.30 Aligned_cols=227 Identities=23% Similarity=0.288 Sum_probs=118.4
Q ss_pred CCEEEEEcCCCceecccCCCCcCCCCCCCEEeCCCCCCCCCCchhccCCCCC-------------CEEEccCccCCccCC
Q 009771 76 GRITDIGLQKSNIKGELGRLNFSCFPNLQYLDLGSNNLSGSIPSQIDSLSNL-------------TYIYLYENNLTGTIP 142 (526)
Q Consensus 76 ~~v~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L-------------~~L~Ls~n~~~~~ip 142 (526)
.+++.+.+++... +.+ +..++++++|++|++++|.+.|.+|..++++++| ++|++++|.+++ +|
T Consensus 11 ~~L~~L~l~~n~l-~~i-P~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp 87 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEM-PVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LP 87 (454)
T ss_dssp -------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CC
T ss_pred ccchhhhcccCch-hhC-ChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CC
Confidence 3566666664333 222 5678888888888888888888888888887764 888888888875 44
Q ss_pred cccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCch
Q 009771 143 KEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPK 222 (526)
Q Consensus 143 ~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~ 222 (526)
.. .++|++|++++|.+++ +|.. +++|++|++++|.+++. |. + .++|++|++++|++++ +|
T Consensus 88 ~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l-~~----~------~~~L~~L~L~~n~l~~-lp- 147 (454)
T 1jl5_A 88 EL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKAL-SD----L------PPLLEYLGVSNNQLEK-LP- 147 (454)
T ss_dssp SC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCC-CS----C------CTTCCEEECCSSCCSS-CC-
T ss_pred CC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcc-cC----C------CCCCCEEECcCCCCCC-Cc-
Confidence 42 3678888888888876 5643 36677777777776642 11 0 1355566666655554 44
Q ss_pred hhcCcCccCcccccccccCCCCchhhhcCcCCCeeecccccCCCCCCccccCCCccceeecccccCCCCCchhhhCCCCC
Q 009771 223 EIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNL 302 (526)
Q Consensus 223 ~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L 302 (526)
.++++++|++|++++|++++ +|.. .++|++|++++|.+++ +| .+..+++|+.|++++|.+++ +|.. .++|
T Consensus 148 ~~~~l~~L~~L~l~~N~l~~-lp~~---~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L 217 (454)
T 1jl5_A 148 ELQNSSFLKIIDVDNNSLKK-LPDL---PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDL---PLSL 217 (454)
T ss_dssp CCTTCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCC---CTTC
T ss_pred ccCCCCCCCEEECCCCcCcc-cCCC---cccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCC---cCcc
Confidence 35555556666665555554 3322 2355555555555554 33 34555555555555555543 2221 1244
Q ss_pred cEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCC
Q 009771 303 TSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLH 337 (526)
Q Consensus 303 ~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~ 337 (526)
++|++++|.+. .+|. ++.+++|++|++++|+++
T Consensus 218 ~~L~l~~n~l~-~lp~-~~~l~~L~~L~l~~N~l~ 250 (454)
T 1jl5_A 218 ESIVAGNNILE-ELPE-LQNLPFLTTIYADNNLLK 250 (454)
T ss_dssp CEEECCSSCCS-SCCC-CTTCTTCCEEECCSSCCS
T ss_pred cEEECcCCcCC-cccc-cCCCCCCCEEECCCCcCC
Confidence 44444444444 3332 444444444444444444
No 48
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=1.3e-34 Score=300.04 Aligned_cols=356 Identities=19% Similarity=0.182 Sum_probs=274.6
Q ss_pred CEEEEEcCCCceecccCCCCcCCCCCCCEEeCCCCCCCC----CCchhccCCCCCCEEEccCccCCccCCccc-CCCC--
Q 009771 77 RITDIGLQKSNIKGELGRLNFSCFPNLQYLDLGSNNLSG----SIPSQIDSLSNLTYIYLYENNLTGTIPKEI-GSLR-- 149 (526)
Q Consensus 77 ~v~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~~~~----~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l-~~l~-- 149 (526)
+++.+++++...........+..+++|++|++++|++++ .++..+..+++|++|++++|.+.+..+..+ ..++
T Consensus 4 ~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~ 83 (461)
T 1z7x_W 4 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 83 (461)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred cceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhC
Confidence 467788875443221112226678999999999999875 357778889999999999999876444333 2344
Q ss_pred --CCCEEEccCCCCCC----CCccccCCCCCCCEEEccCCcCCccCCcccccCccc-ccCCCCCCEEEccCCcCCCcC--
Q 009771 150 --NLEVLDLGSNNLNG----TIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIE-IESLRNLQWLDLSSNKLSGTI-- 220 (526)
Q Consensus 150 --~L~~L~L~~n~l~~----~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~-l~~l~~L~~L~l~~n~l~~~~-- 220 (526)
+|++|+|++|.++. .++..+.++++|++|++++|.+++..+..+. .. ....++|++|++++|++++..
T Consensus 84 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~---~~l~~~~~~L~~L~L~~n~l~~~~~~ 160 (461)
T 1z7x_W 84 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLC---EGLLDPQCRLEKLQLEYCSLSAASCE 160 (461)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHH---HHHTSTTCCCCEEECTTSCCBGGGHH
T ss_pred CCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHH---HHHhcCCCcceEEECCCCCCCHHHHH
Confidence 79999999999984 4588899999999999999998765443221 11 123568999999999998754
Q ss_pred --chhhcCcCccCcccccccccCCCCchhhhc-----CcCCCeeecccccCCCC----CCccccCCCccceeecccccCC
Q 009771 221 --PKEIGSLRNLKELDLSSNKLGGVLPQEIEN-----LKSLTALSMDANNLGGP----IPSTLFRLTNIEYLSLGFNRFN 289 (526)
Q Consensus 221 --p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~-----l~~L~~L~l~~n~l~~~----~p~~l~~~~~L~~L~L~~n~l~ 289 (526)
+..+..+++|++|++++|.+++..+..+.. .++|++|++++|.+++. ++..+..+++|++|++++|.++
T Consensus 161 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~ 240 (461)
T 1z7x_W 161 PLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLG 240 (461)
T ss_dssp HHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCH
T ss_pred HHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCC
Confidence 566677899999999999987654444432 56999999999998874 5666778899999999999887
Q ss_pred CCC-----chhhhCCCCCcEEEeeCccCcCC----CCCCCCCCCcccEEECCCCcCCCCCccccc-----CCCCCCeecC
Q 009771 290 GSI-----PREIVNLKNLTSLSLGGNKLTGH----IPSTLGRLTSLQILDLSSNQLHSSIPLVIG-----NFSALSYLDL 355 (526)
Q Consensus 290 g~~-----p~~l~~~~~L~~L~l~~n~l~~~----~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~-----~l~~L~~L~L 355 (526)
+.. +..+..+++|++|++++|.+++. ++..+..+++|++|++++|.+++..+..+. ..++|++|++
T Consensus 241 ~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L 320 (461)
T 1z7x_W 241 DVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWV 320 (461)
T ss_dssp HHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEEC
T ss_pred hHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEc
Confidence 542 22233588999999999998864 566677789999999999998754433332 2368999999
Q ss_pred cCCcCccc----CcccccCCCCCCEEecCCCcCcccchHHhhc-----CcCCCEEEccCCcCcc----cccccccCCCCC
Q 009771 356 SDNRICGI----IPDELTKLSHLKYLNLSSNLLSGQIPFAIGK-----LFNLASLDLSKNKLSG----SIPTEIGNCSEL 422 (526)
Q Consensus 356 ~~n~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-----~~~L~~L~l~~n~l~~----~~~~~~~~l~~L 422 (526)
++|.+++. ++..+..+++|++|++++|.+++..+..+.. .++|++|++++|.+++ .+|..+..+++|
T Consensus 321 ~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L 400 (461)
T 1z7x_W 321 KSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSL 400 (461)
T ss_dssp TTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCC
T ss_pred CCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCc
Confidence 99999876 4566677899999999999998766665553 6799999999999987 778888889999
Q ss_pred CeEEcCCCCCCch
Q 009771 423 RNLTLNHNSLNGK 435 (526)
Q Consensus 423 ~~l~l~~n~l~~~ 435 (526)
++|++++|+++.+
T Consensus 401 ~~L~l~~N~i~~~ 413 (461)
T 1z7x_W 401 RELDLSNNCLGDA 413 (461)
T ss_dssp CEEECCSSSCCHH
T ss_pred cEEECCCCCCCHH
Confidence 9999999998754
No 49
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=1.2e-30 Score=260.52 Aligned_cols=285 Identities=22% Similarity=0.257 Sum_probs=155.7
Q ss_pred CCCCCcccceeeCCC-CCEEEEEcCCCceecccCCCCcCCCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCc
Q 009771 61 TSDHCGWVGITCDYE-GRITDIGLQKSNIKGELGRLNFSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTG 139 (526)
Q Consensus 61 ~~~~C~w~gv~C~~~-~~v~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~ 139 (526)
....|.|.|+ |+.. .+++.+ +..+ .++|++|++++|++++..+..+.++++|++|++++|.+++
T Consensus 26 ~~~~C~~~~~-c~~~~~~l~~i------------P~~~--~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~ 90 (353)
T 2z80_A 26 ASLSCDRNGI-CKGSSGSLNSI------------PSGL--TEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINT 90 (353)
T ss_dssp -CCEECTTSE-EECCSTTCSSC------------CTTC--CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCE
T ss_pred cCCCCCCCeE-eeCCCCCcccc------------cccc--cccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCc
Confidence 4578899887 6532 222211 2222 2477788888777776555567777777777777777776
Q ss_pred cCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCc-CCC
Q 009771 140 TIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNK-LSG 218 (526)
Q Consensus 140 ~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~-l~~ 218 (526)
..|..|+++++|++|++++|.+++..+..++++++|++|++++|.+++..+. ..+.++++|++|++++|. +.+
T Consensus 91 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~------~~~~~l~~L~~L~l~~n~~~~~ 164 (353)
T 2z80_A 91 IEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGET------SLFSHLTKLQILRVGNMDTFTK 164 (353)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSS------CSCTTCTTCCEEEEEESSSCCE
T ss_pred cCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCch------hhhccCCCCcEEECCCCccccc
Confidence 6666777777777777777777654444467777777777777766632110 123456666666666663 333
Q ss_pred cCchhhcCcCccCcccccccccCCCCchhhhcCcCCCeeecccccCCCCCCccccCCCccceeecccccCCCCCchhhhC
Q 009771 219 TIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVN 298 (526)
Q Consensus 219 ~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~ 298 (526)
..+..++++++|++|++++ |.+++..|..+..+++|++|++++|.++...+..+..
T Consensus 165 ~~~~~~~~l~~L~~L~l~~------------------------n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~ 220 (353)
T 2z80_A 165 IQRKDFAGLTFLEELEIDA------------------------SDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDV 220 (353)
T ss_dssp ECTTTTTTCCEEEEEEEEE------------------------TTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHH
T ss_pred cCHHHccCCCCCCEEECCC------------------------CCcCccCHHHHhccccCCeecCCCCccccchhhhhhh
Confidence 3334444444444444444 4444444555555666666666666664322223344
Q ss_pred CCCCcEEEeeCccCcCCCCCCCC---CCCcccEEECCCCcCCCCCcccccCCCCCCeecCcCCcCcccCcccccCCCCCC
Q 009771 299 LKNLTSLSLGGNKLTGHIPSTLG---RLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICGIIPDELTKLSHLK 375 (526)
Q Consensus 299 ~~~L~~L~l~~n~l~~~~p~~l~---~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 375 (526)
+++|+.|++++|.+++..+..+. ....++.++++++.+++. .+. .+|..+..+++|+
T Consensus 221 ~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~-------------------~l~-~l~~~l~~l~~L~ 280 (353)
T 2z80_A 221 TSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDE-------------------SLF-QVMKLLNQISGLL 280 (353)
T ss_dssp TTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHH-------------------HHH-HHHHHHHTCTTCC
T ss_pred cccccEEECCCCccccccccccccccccchhhccccccccccCc-------------------chh-hhHHHHhcccCCC
Confidence 67777777777777654333221 123334444444433321 000 2334444445555
Q ss_pred EEecCCCcCcccchHH-hhcCcCCCEEEccCCcCccc
Q 009771 376 YLNLSSNLLSGQIPFA-IGKLFNLASLDLSKNKLSGS 411 (526)
Q Consensus 376 ~L~L~~n~l~~~~~~~-~~~~~~L~~L~l~~n~l~~~ 411 (526)
+|++++|+++ .+|.. ++.+++|++|++++|.+.+.
T Consensus 281 ~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~ 316 (353)
T 2z80_A 281 ELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCS 316 (353)
T ss_dssp EEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred EEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccCc
Confidence 5555555554 23332 34455555555555555543
No 50
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=1.2e-29 Score=250.20 Aligned_cols=236 Identities=22% Similarity=0.309 Sum_probs=172.7
Q ss_pred CCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCcccccC
Q 009771 123 SLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIES 202 (526)
Q Consensus 123 ~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~ 202 (526)
..+++++|+|++|.++ .+|..++++++|++|+|++|.++ .+|..++++++|++|++++|.++ .+ |..+++
T Consensus 79 ~~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~l-------p~~l~~ 148 (328)
T 4fcg_A 79 TQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-AL-------PASIAS 148 (328)
T ss_dssp TSTTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CC-------CGGGGG
T ss_pred cccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cC-------cHHHhc
Confidence 3588999999999998 78888999999999999999998 88999999999999999999887 33 445678
Q ss_pred CCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCeeecccccCCCCCCccccCCCccceee
Q 009771 203 LRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLS 282 (526)
Q Consensus 203 l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~ 282 (526)
+++|++|++++|++.+.+|..++.. . ++..+.++++|++|++++|.++ .+|..+..+++|++|+
T Consensus 149 l~~L~~L~L~~n~~~~~~p~~~~~~-----------~----~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~ 212 (328)
T 4fcg_A 149 LNRLRELSIRACPELTELPEPLAST-----------D----ASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLK 212 (328)
T ss_dssp CTTCCEEEEEEETTCCCCCSCSEEE-----------C-----CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEE
T ss_pred CcCCCEEECCCCCCccccChhHhhc-----------c----chhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEE
Confidence 8899999999988888888766541 0 1122345566666666666665 5555666666666666
Q ss_pred cccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCCCCCcccccCCCCCCeecCcCCcCcc
Q 009771 283 LGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICG 362 (526)
Q Consensus 283 L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 362 (526)
+++|.+++ +|..+..+++|++|++++|.+.+.+|..++.+++|++|++++|.+.+.+|..++.+++|++|++++|++.+
T Consensus 213 L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~ 291 (328)
T 4fcg_A 213 IRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLS 291 (328)
T ss_dssp EESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCC
T ss_pred ccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchh
Confidence 66666664 44456666677777777766666666666677777777777777666677666677777777777777777
Q ss_pred cCcccccCCCCCCEEecCCCcCc
Q 009771 363 IIPDELTKLSHLKYLNLSSNLLS 385 (526)
Q Consensus 363 ~~~~~~~~l~~L~~L~L~~n~l~ 385 (526)
.+|..+..+++|+.+++..+.+.
T Consensus 292 ~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 292 RLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp CCCGGGGGSCTTCEEECCGGGSC
T ss_pred hccHHHhhccCceEEeCCHHHHH
Confidence 77777777777777776655443
No 51
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=2.3e-30 Score=253.12 Aligned_cols=253 Identities=24% Similarity=0.316 Sum_probs=181.7
Q ss_pred CcccceeeCCCCCEEEEEcCCCceecccCCCCcCCCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCc--cCC
Q 009771 65 CGWVGITCDYEGRITDIGLQKSNIKGELGRLNFSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTG--TIP 142 (526)
Q Consensus 65 C~w~gv~C~~~~~v~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~--~ip 142 (526)
|.|.++.|+..+ ++.+ +. .-.++|++|++++|+++...+..+.++++|++|++++|.++. .+|
T Consensus 7 C~~~~l~c~~~~-l~~i------------p~--~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 71 (306)
T 2z66_A 7 CSGTEIRCNSKG-LTSV------------PT--GIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCS 71 (306)
T ss_dssp EETTEEECCSSC-CSSC------------CS--CCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEE
T ss_pred eCCCEEEcCCCC-cccC------------CC--CCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcc
Confidence 689999997432 2211 21 123688899999998885444457888999999999988873 335
Q ss_pred cccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCch
Q 009771 143 KEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPK 222 (526)
Q Consensus 143 ~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~ 222 (526)
..+..+++|++|++++|.+. .+|..+.++++|++|++++|.+++..+. ..+.++++|++|++++|.+.+..+.
T Consensus 72 ~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~------~~~~~l~~L~~L~l~~n~l~~~~~~ 144 (306)
T 2z66_A 72 QSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEF------SVFLSLRNLIYLDISHTHTRVAFNG 144 (306)
T ss_dssp HHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTT------TTTTTCTTCCEEECTTSCCEECSTT
T ss_pred cccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccc------hhhhhccCCCEEECCCCcCCccchh
Confidence 66667888888988888886 4666788888888888888887754331 1346777888888888888777777
Q ss_pred hhcCcCccCcccccccccCC-CCchhhhcCcCCCeeecccccCCCCCCccccCCCccceeecccccCCCCCchhhhCCCC
Q 009771 223 EIGSLRNLKELDLSSNKLGG-VLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKN 301 (526)
Q Consensus 223 ~l~~l~~L~~L~l~~n~l~~-~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~ 301 (526)
.+..+++|++|++++|.+.+ .+|..+..+++|++|++++|.+++..|..+..+++|++|++++|.+++..+..+..+++
T Consensus 145 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 224 (306)
T 2z66_A 145 IFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNS 224 (306)
T ss_dssp TTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTT
T ss_pred hcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCccc
Confidence 77777888888888887765 45666777777777777777777666666777777777777777777655556666777
Q ss_pred CcEEEeeCccCcCCCCCCCCCCC-cccEEECCCCcCCCC
Q 009771 302 LTSLSLGGNKLTGHIPSTLGRLT-SLQILDLSSNQLHSS 339 (526)
Q Consensus 302 L~~L~l~~n~l~~~~p~~l~~l~-~L~~L~Ls~n~l~~~ 339 (526)
|++|++++|.+.+..|..+..++ +|++|++++|.+++.
T Consensus 225 L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 225 LQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp CCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECS
T ss_pred CCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecc
Confidence 77777777777766666666663 677777777766543
No 52
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.96 E-value=1.9e-32 Score=283.69 Aligned_cols=358 Identities=22% Similarity=0.188 Sum_probs=275.8
Q ss_pred CEEEEEcCCCceecc---cCCCCcCCCCCCCEEeCCCCCCCCCCchhc-cCCC----CCCEEEccCccCCc----cCCcc
Q 009771 77 RITDIGLQKSNIKGE---LGRLNFSCFPNLQYLDLGSNNLSGSIPSQI-DSLS----NLTYIYLYENNLTG----TIPKE 144 (526)
Q Consensus 77 ~v~~l~l~~~~~~~~---~~~~~~~~l~~L~~L~l~~n~~~~~~p~~l-~~l~----~L~~L~Ls~n~~~~----~ip~~ 144 (526)
+++.+++++...... .-+..+..+++|++|++++|.+++..+..+ ..++ +|++|++++|.++. .+|..
T Consensus 29 ~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~ 108 (461)
T 1z7x_W 29 QCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSST 108 (461)
T ss_dssp TCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHH
T ss_pred CccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHH
Confidence 566777775443210 002356778999999999999876544333 3455 79999999999984 56888
Q ss_pred cCCCCCCCEEEccCCCCCCCCcccc-----CCCCCCCEEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCc
Q 009771 145 IGSLRNLEVLDLGSNNLNGTIPIEI-----GSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGT 219 (526)
Q Consensus 145 l~~l~~L~~L~L~~n~l~~~~p~~l-----~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~ 219 (526)
+..+++|++|++++|.+++..+..+ ...++|++|++++|.+++.... .++..+..+++|++|++++|.+++.
T Consensus 109 l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~---~l~~~l~~~~~L~~L~L~~n~i~~~ 185 (461)
T 1z7x_W 109 LRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCE---PLASVLRAKPDFKELTVSNNDINEA 185 (461)
T ss_dssp TTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHH---HHHHHHHHCTTCCEEECCSSBCHHH
T ss_pred HccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHH---HHHHHHhhCCCCCEEECcCCCcchH
Confidence 9999999999999999875444332 2367899999999998865332 2345567789999999999998866
Q ss_pred CchhhcC-----cCccCcccccccccCCC----CchhhhcCcCCCeeecccccCCCCC-----CccccCCCccceeeccc
Q 009771 220 IPKEIGS-----LRNLKELDLSSNKLGGV----LPQEIENLKSLTALSMDANNLGGPI-----PSTLFRLTNIEYLSLGF 285 (526)
Q Consensus 220 ~p~~l~~-----l~~L~~L~l~~n~l~~~----~p~~l~~l~~L~~L~l~~n~l~~~~-----p~~l~~~~~L~~L~L~~ 285 (526)
.+..+.. .++|++|++++|.+++. ++..+..+++|++|++++|.+++.. +.....+++|++|++++
T Consensus 186 ~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~ 265 (461)
T 1z7x_W 186 GVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWE 265 (461)
T ss_dssp HHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTT
T ss_pred HHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcC
Confidence 5555543 56999999999999874 5777888999999999999887532 22233578999999999
Q ss_pred ccCCCC----CchhhhCCCCCcEEEeeCccCcCCCCCCCC-----CCCcccEEECCCCcCCCC----CcccccCCCCCCe
Q 009771 286 NRFNGS----IPREIVNLKNLTSLSLGGNKLTGHIPSTLG-----RLTSLQILDLSSNQLHSS----IPLVIGNFSALSY 352 (526)
Q Consensus 286 n~l~g~----~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~-----~l~~L~~L~Ls~n~l~~~----~~~~~~~l~~L~~ 352 (526)
|.+++. ++..+..+++|++|++++|.+.+..+..+. ..++|++|++++|.+++. ++..+..+++|++
T Consensus 266 n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~ 345 (461)
T 1z7x_W 266 CGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLE 345 (461)
T ss_dssp SCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCE
T ss_pred CCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccE
Confidence 999864 677788899999999999998754333332 236999999999999875 4666778899999
Q ss_pred ecCcCCcCcccCcccccC-----CCCCCEEecCCCcCcc----cchHHhhcCcCCCEEEccCCcCccccccccc-----C
Q 009771 353 LDLSDNRICGIIPDELTK-----LSHLKYLNLSSNLLSG----QIPFAIGKLFNLASLDLSKNKLSGSIPTEIG-----N 418 (526)
Q Consensus 353 L~L~~n~l~~~~~~~~~~-----l~~L~~L~L~~n~l~~----~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~-----~ 418 (526)
|++++|.+++..+..+.. .++|++|++++|.+++ .++..+..+++|++|++++|.+++.....+. .
T Consensus 346 L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~~ 425 (461)
T 1z7x_W 346 LQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQP 425 (461)
T ss_dssp EECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTST
T ss_pred EEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHHHhccC
Confidence 999999998776554442 6799999999999997 7888999999999999999999875332222 2
Q ss_pred CCCCCeEEcCCCCCCchhc
Q 009771 419 CSELRNLTLNHNSLNGKLA 437 (526)
Q Consensus 419 l~~L~~l~l~~n~l~~~~~ 437 (526)
...|+.|.+.++.+.++..
T Consensus 426 ~~~L~~L~~~~~~~~~~~~ 444 (461)
T 1z7x_W 426 GCLLEQLVLYDIYWSEEME 444 (461)
T ss_dssp TCCCCEEECTTCCCCHHHH
T ss_pred CcchhheeecccccCHHHH
Confidence 4468889988887765433
No 53
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=5.2e-30 Score=250.58 Aligned_cols=280 Identities=25% Similarity=0.283 Sum_probs=167.1
Q ss_pred EEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCC--CCccccCCCCCCCEEEccC
Q 009771 105 YLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNG--TIPIEIGSVRNLETLSLDG 182 (526)
Q Consensus 105 ~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~--~~p~~l~~l~~L~~L~L~~ 182 (526)
.++.++++++ .+|..+. ++|++|++++|.++...+..|.++++|++|+|++|.++. ..|..+..+++|++|++++
T Consensus 11 ~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~ 87 (306)
T 2z66_A 11 EIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSF 87 (306)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCS
T ss_pred EEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCC
Confidence 5666666665 3454432 577777777777774333446777777777777777652 2244555566677777776
Q ss_pred CcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCc-hhhcCcCccCcccccccccCCCCchhhhcCcCCCeeeccc
Q 009771 183 NKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIP-KEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDA 261 (526)
Q Consensus 183 n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p-~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~ 261 (526)
|.+++ +|..+..+++|++|++++|++++..+ ..+..+++|++|+++ +
T Consensus 88 n~i~~--------l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~------------------------~ 135 (306)
T 2z66_A 88 NGVIT--------MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDIS------------------------H 135 (306)
T ss_dssp CSEEE--------EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECT------------------------T
T ss_pred Ccccc--------ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECC------------------------C
Confidence 66552 23334556666666666666554333 334444445555544 4
Q ss_pred ccCCCCCCccccCCCccceeecccccCCC-CCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCCCCC
Q 009771 262 NNLGGPIPSTLFRLTNIEYLSLGFNRFNG-SIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSI 340 (526)
Q Consensus 262 n~l~~~~p~~l~~~~~L~~L~L~~n~l~g-~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~ 340 (526)
|.+.+..+..+..+++|++|++++|.+++ .+|..+..+++|++|++++|.+++..|..+..+++|++|++++|.+++..
T Consensus 136 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 215 (306)
T 2z66_A 136 THTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLD 215 (306)
T ss_dssp SCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCC
T ss_pred CcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccC
Confidence 44444444445555555555555555554 34555666666666666666666655666666677777777777776655
Q ss_pred cccccCCCCCCeecCcCCcCcccCcccccCCC-CCCEEecCCCcCcccch--HHhhcCcCCCEEEccCCcCccccccccc
Q 009771 341 PLVIGNFSALSYLDLSDNRICGIIPDELTKLS-HLKYLNLSSNLLSGQIP--FAIGKLFNLASLDLSKNKLSGSIPTEIG 417 (526)
Q Consensus 341 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~--~~~~~~~~L~~L~l~~n~l~~~~~~~~~ 417 (526)
+..+..+++|++|++++|++++..|..+..++ +|++|++++|.+++... .....+...+.+.+..+.+....|..+.
T Consensus 216 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~~~~ 295 (306)
T 2z66_A 216 TFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSDKQ 295 (306)
T ss_dssp SGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESGGGT
T ss_pred hhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCchhhC
Confidence 55666777777777777777777777776663 77777777777765422 1112222333444555666666676665
Q ss_pred CC
Q 009771 418 NC 419 (526)
Q Consensus 418 ~l 419 (526)
+.
T Consensus 296 g~ 297 (306)
T 2z66_A 296 GM 297 (306)
T ss_dssp TC
T ss_pred Cc
Confidence 43
No 54
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=1.8e-29 Score=251.85 Aligned_cols=210 Identities=21% Similarity=0.257 Sum_probs=115.9
Q ss_pred CCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCc-hhhhcCcCCCeeeccccc-CCCCCCccccCCCccc
Q 009771 202 SLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLP-QEIENLKSLTALSMDANN-LGGPIPSTLFRLTNIE 279 (526)
Q Consensus 202 ~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p-~~l~~l~~L~~L~l~~n~-l~~~~p~~l~~~~~L~ 279 (526)
++++|++|++++|++++..+..++++++|++|++++|.+++..+ ..+..+++|++|++++|. +.+..+..+..+++|+
T Consensus 98 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~ 177 (353)
T 2z80_A 98 SLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLE 177 (353)
T ss_dssp TCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEE
T ss_pred CCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCC
Confidence 33344444444444433222224444444444444444432211 133444444444444442 2222233444555555
Q ss_pred eeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCCCCCcccccCCCCCCeecCcCCc
Q 009771 280 YLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNR 359 (526)
Q Consensus 280 ~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~ 359 (526)
+|++++|.+++..|..+..+++|++|++++|.+... ....+..+++|++|++++|+
T Consensus 178 ~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~------------------------~~~~~~~~~~L~~L~L~~n~ 233 (353)
T 2z80_A 178 ELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILL------------------------LEIFVDVTSSVECLELRDTD 233 (353)
T ss_dssp EEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTH------------------------HHHHHHHTTTEEEEEEESCB
T ss_pred EEECCCCCcCccCHHHHhccccCCeecCCCCccccc------------------------hhhhhhhcccccEEECCCCc
Confidence 555555555554455555555555555555554322 11122234445555555554
Q ss_pred CcccCcccc---cCCCCCCEEecCCCcCcc----cchHHhhcCcCCCEEEccCCcCccccccc-ccCCCCCCeEEcCCCC
Q 009771 360 ICGIIPDEL---TKLSHLKYLNLSSNLLSG----QIPFAIGKLFNLASLDLSKNKLSGSIPTE-IGNCSELRNLTLNHNS 431 (526)
Q Consensus 360 l~~~~~~~~---~~l~~L~~L~L~~n~l~~----~~~~~~~~~~~L~~L~l~~n~l~~~~~~~-~~~l~~L~~l~l~~n~ 431 (526)
+++..+..+ .....++.++++++.+++ .+|..++.+++|++|++++|.++ .+|.. +.++++|++|++++|+
T Consensus 234 l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~ 312 (353)
T 2z80_A 234 LDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNP 312 (353)
T ss_dssp CTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSC
T ss_pred cccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCC
Confidence 444332222 234567788888888775 47888999999999999999999 55655 5899999999999999
Q ss_pred CCchh
Q 009771 432 LNGKL 436 (526)
Q Consensus 432 l~~~~ 436 (526)
+....
T Consensus 313 ~~~~~ 317 (353)
T 2z80_A 313 WDCSC 317 (353)
T ss_dssp BCCCH
T ss_pred ccCcC
Confidence 87544
No 55
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=1.3e-28 Score=238.13 Aligned_cols=207 Identities=27% Similarity=0.285 Sum_probs=114.0
Q ss_pred CCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCC-CCCCCccccCCCCCCCEE
Q 009771 100 FPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNN-LNGTIPIEIGSVRNLETL 178 (526)
Q Consensus 100 l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~-l~~~~p~~l~~l~~L~~L 178 (526)
.++|++|++++|.+++..+..+..+++|++|++++|.+++..|..|.++++|++|++++|. +....|..+.++++|++|
T Consensus 31 ~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 31 PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 3566666666666665555556666666666666666665556666666666666666665 544445556666666666
Q ss_pred EccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCeee
Q 009771 179 SLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALS 258 (526)
Q Consensus 179 ~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~ 258 (526)
++++|.+++..|.. +.++++|++|++++|++++..+..++.+++|++|++++|.+++..+..+..+++|+.|+
T Consensus 111 ~l~~n~l~~~~~~~-------~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 183 (285)
T 1ozn_A 111 HLDRCGLQELGPGL-------FRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLL 183 (285)
T ss_dssp ECTTSCCCCCCTTT-------TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred ECCCCcCCEECHhH-------hhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEE
Confidence 66666665443332 24555666666666665544444455555555555555555544333444455555555
Q ss_pred cccccCCCCCCccccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCc
Q 009771 259 MDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLT 313 (526)
Q Consensus 259 l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~ 313 (526)
+++|.+++..|..+..+++|+.|++++|.+++..+..+..+++|++|++++|.+.
T Consensus 184 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 238 (285)
T 1ozn_A 184 LHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWV 238 (285)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEE
T ss_pred CCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCcc
Confidence 5555544444444444444444444444444433333444444444444444443
No 56
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=8.5e-28 Score=247.08 Aligned_cols=227 Identities=22% Similarity=0.257 Sum_probs=156.3
Q ss_pred CCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEc
Q 009771 101 PNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSL 180 (526)
Q Consensus 101 ~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 180 (526)
++++.|+|++|++++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++|.+++..+..+.++++|++|++
T Consensus 64 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (440)
T 3zyj_A 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWL 143 (440)
T ss_dssp TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEEC
T ss_pred CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeC
Confidence 67888899888888777788888888888988888888777778888888888888888888665567888888888888
Q ss_pred cCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCc-hhhcCcCccCcccccccccCCCCchhhhcCcCCCeeec
Q 009771 181 DGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIP-KEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSM 259 (526)
Q Consensus 181 ~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p-~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l 259 (526)
++|.++...+.. +.++++|++|++++|...+.++ ..|.++++|++|++++|+++. +| .+..+++|+.|++
T Consensus 144 ~~N~i~~~~~~~-------~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~L 214 (440)
T 3zyj_A 144 RNNPIESIPSYA-------FNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IP-NLTPLIKLDELDL 214 (440)
T ss_dssp CSCCCCEECTTT-------TTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CC-CCTTCSSCCEEEC
T ss_pred CCCcccccCHHH-------hhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-cc-ccCCCcccCEEEC
Confidence 888887554433 3577788888888754443443 356677777777777777663 33 2555566666666
Q ss_pred ccccCCCCCCccccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcC
Q 009771 260 DANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQL 336 (526)
Q Consensus 260 ~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l 336 (526)
++|.+++..|..+..+++|+.|++++|.+++..+..+.++++|+.|+|++|++++..+..+..+++|+.|++++|.+
T Consensus 215 s~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~ 291 (440)
T 3zyj_A 215 SGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPW 291 (440)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCE
T ss_pred CCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCc
Confidence 66666555555555566666666666665555555555555566666655555554444555555555555555554
No 57
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=1.5e-27 Score=246.13 Aligned_cols=227 Identities=23% Similarity=0.242 Sum_probs=148.2
Q ss_pred CCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEc
Q 009771 101 PNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSL 180 (526)
Q Consensus 101 ~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 180 (526)
+++++|+|++|++++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+..+.++++|++|++
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 67888888888888877888888888888888888888777788888888888888888888666666888888888888
Q ss_pred cCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCc-hhhcCcCccCcccccccccCCCCchhhhcCcCCCeeec
Q 009771 181 DGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIP-KEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSM 259 (526)
Q Consensus 181 ~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p-~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l 259 (526)
++|.+++..+. .+.++++|++|++++|...+.++ ..|.++++|++|++++|++++. | .+..+++|+.|++
T Consensus 155 ~~N~l~~~~~~-------~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~L 225 (452)
T 3zyi_A 155 RNNPIESIPSY-------AFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEM 225 (452)
T ss_dssp CSCCCCEECTT-------TTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEEC
T ss_pred CCCCcceeCHh-------HHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-cccccccccEEEC
Confidence 88887754333 23567788888887744333433 3466666666666666666543 2 2445555555555
Q ss_pred ccccCCCCCCccccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcC
Q 009771 260 DANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQL 336 (526)
Q Consensus 260 ~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l 336 (526)
++|.+++..|..+..+++|+.|++++|.+++..+..+..+++|+.|++++|++++..+..+..+++|+.|++++|.+
T Consensus 226 s~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~ 302 (452)
T 3zyi_A 226 SGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPW 302 (452)
T ss_dssp TTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCE
T ss_pred cCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCc
Confidence 55555554455555555555555555555544444455555555555555555544444444455555555555544
No 58
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=6.1e-28 Score=233.40 Aligned_cols=224 Identities=25% Similarity=0.266 Sum_probs=126.5
Q ss_pred CEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCcccccCCCCCC
Q 009771 128 TYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQ 207 (526)
Q Consensus 128 ~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~ 207 (526)
++++.+++.++ .+|..+ .++|++|++++|.+++..+..+.++++|++|++++|.+++..|.. +.++++|+
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~-------~~~l~~L~ 83 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAA-------FTGLALLE 83 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTT-------TTTCTTCC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhh-------cCCccCCC
Confidence 56777777776 455543 367778888877777655566777777777777777776554433 34566777
Q ss_pred EEEccCCc-CCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCeeecccccCCCCCCccccCCCccceeecccc
Q 009771 208 WLDLSSNK-LSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFN 286 (526)
Q Consensus 208 ~L~l~~n~-l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n 286 (526)
+|++++|. +....|..+..+++|++|++++|.+++..|..+.++++|++|++++|.+++..+..+..+++|++|++++|
T Consensus 84 ~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 163 (285)
T 1ozn_A 84 QLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGN 163 (285)
T ss_dssp EEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCC
Confidence 77777775 55444555666666666666666665555555555555555555555554433333444444444444444
Q ss_pred cCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCCCCCcccccCCCCCCeecCcCCcCcccCcc
Q 009771 287 RFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICGIIPD 366 (526)
Q Consensus 287 ~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 366 (526)
. +++..+..+..+++|++|++++|.+++..|..+..+++|++|++++|++++..+.
T Consensus 164 ~------------------------l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 219 (285)
T 1ozn_A 164 R------------------------ISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTE 219 (285)
T ss_dssp C------------------------CCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHH
T ss_pred c------------------------ccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHH
Confidence 4 4433333344444445555555544444444444455555555555555544444
Q ss_pred cccCCCCCCEEecCCCcCc
Q 009771 367 ELTKLSHLKYLNLSSNLLS 385 (526)
Q Consensus 367 ~~~~l~~L~~L~L~~n~l~ 385 (526)
.+..+++|++|++++|.++
T Consensus 220 ~~~~l~~L~~L~l~~N~~~ 238 (285)
T 1ozn_A 220 ALAPLRALQYLRLNDNPWV 238 (285)
T ss_dssp HHTTCTTCCEEECCSSCEE
T ss_pred HcccCcccCEEeccCCCcc
Confidence 4455555555555555554
No 59
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=7e-30 Score=250.29 Aligned_cols=256 Identities=20% Similarity=0.230 Sum_probs=139.1
Q ss_pred cCCCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccC-CccCCcccC-------CCCCCCEEEccCCCCCCCCccc
Q 009771 97 FSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNL-TGTIPKEIG-------SLRNLEVLDLGSNNLNGTIPIE 168 (526)
Q Consensus 97 ~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~-~~~ip~~l~-------~l~~L~~L~L~~n~l~~~~p~~ 168 (526)
++..++|+.|++++|.+ .+|..+... |++|++++|.+ .+.+|..+. ++++|++|+|++|.+++.+|..
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 34455666677777766 556555443 66667777766 344555544 5666777777777766666665
Q ss_pred c--CCCCCCCEEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCC--
Q 009771 169 I--GSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVL-- 244 (526)
Q Consensus 169 l--~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~-- 244 (526)
+ +.+++|++|++++|.+++. |..+..++.. .+++|++|++++|++++..|..|+++++|++|++++|++.+.+
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~--~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 191 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQQW--LKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGL 191 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTT--CCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHH
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHHHHh--hcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHH
Confidence 4 6666666666666666655 4433222110 1256666666666666555555666666666666666554331
Q ss_pred chhhhcCcCCCeeecccccCCCCCCccccCCCccceeecccccCCC--CCc-hhhhCCCCCcEEEeeCccCcCCCC-CCC
Q 009771 245 PQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNG--SIP-REIVNLKNLTSLSLGGNKLTGHIP-STL 320 (526)
Q Consensus 245 p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g--~~p-~~l~~~~~L~~L~l~~n~l~~~~p-~~l 320 (526)
+..+ .+..+++|++|++++|.+++ .++ ..+.++++|++|++++|++++..| ..+
T Consensus 192 ~~~~----------------------~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 249 (312)
T 1wwl_A 192 ISAL----------------------CPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSC 249 (312)
T ss_dssp HHHS----------------------CTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCC
T ss_pred HHHH----------------------HhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhh
Confidence 1222 01334455555555555542 111 223445566666666666665443 334
Q ss_pred CCCCcccEEECCCCcCCCCCcccccCCCCCCeecCcCCcCcccCcccccCCCCCCEEecCCCcCcc
Q 009771 321 GRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLLSG 386 (526)
Q Consensus 321 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 386 (526)
..+++|++|++++|.++ .+|..+. ++|++|++++|++++. |. +..+++|++|++++|.+++
T Consensus 250 ~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 250 DWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred hhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 44556666666666655 4444443 5555556665555543 33 4555555555555555543
No 60
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=2.9e-27 Score=243.04 Aligned_cols=235 Identities=24% Similarity=0.266 Sum_probs=179.0
Q ss_pred CCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCccccc
Q 009771 116 SIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGT 195 (526)
Q Consensus 116 ~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ 195 (526)
.+|..+. +++++|+|++|++.+..+..|.++++|++|+|++|.+.+..+..|.++++|++|+|++|++++..+..
T Consensus 57 ~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~--- 131 (440)
T 3zyj_A 57 EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGA--- 131 (440)
T ss_dssp SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTT---
T ss_pred cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhH---
Confidence 4565554 68999999999999888889999999999999999999877788999999999999999988654433
Q ss_pred CcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCc-hhhhcCcCCCeeecccccCCCCCCccccC
Q 009771 196 IPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLP-QEIENLKSLTALSMDANNLGGPIPSTLFR 274 (526)
Q Consensus 196 ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p-~~l~~l~~L~~L~l~~n~l~~~~p~~l~~ 274 (526)
+..+++|++|++++|++.+..+..|.++++|++|++++|+..+.++ ..+.++++|++|++++|.++. +| .+..
T Consensus 132 ----~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~ 205 (440)
T 3zyj_A 132 ----FVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IP-NLTP 205 (440)
T ss_dssp ----SCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CC-CCTT
T ss_pred ----hhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-cc-ccCC
Confidence 4678899999999999987777788888899999998854433333 457777888888888887763 33 3566
Q ss_pred CCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCCCCCcccccCCCCCCeec
Q 009771 275 LTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLD 354 (526)
Q Consensus 275 ~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 354 (526)
+++|+.|++++|.+++..|..+..+++|+.|++++|++++..+..|..+++|++|+|++|++++..+..+..+++|+.|+
T Consensus 206 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 285 (440)
T 3zyj_A 206 LIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIH 285 (440)
T ss_dssp CSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEE
T ss_pred CcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEE
Confidence 67777777777777766666677777777777777777766666666677777777777777665555566666666666
Q ss_pred CcCCcCc
Q 009771 355 LSDNRIC 361 (526)
Q Consensus 355 L~~n~l~ 361 (526)
+++|.+.
T Consensus 286 L~~Np~~ 292 (440)
T 3zyj_A 286 LHHNPWN 292 (440)
T ss_dssp CCSSCEE
T ss_pred cCCCCcc
Confidence 6666654
No 61
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=6.1e-30 Score=250.72 Aligned_cols=223 Identities=22% Similarity=0.275 Sum_probs=175.9
Q ss_pred CCEEeCCCCCC-CCCCchhcc-------CCCCCCEEEccCccCCccCCccc--CCCCCCCEEEccCCCCCCCCccccCCC
Q 009771 103 LQYLDLGSNNL-SGSIPSQID-------SLSNLTYIYLYENNLTGTIPKEI--GSLRNLEVLDLGSNNLNGTIPIEIGSV 172 (526)
Q Consensus 103 L~~L~l~~n~~-~~~~p~~l~-------~l~~L~~L~Ls~n~~~~~ip~~l--~~l~~L~~L~L~~n~l~~~~p~~l~~l 172 (526)
|+.|++++|.+ .+.+|..+. ++++|++|++++|.+++.+|..+ +.+++|++|+|++|.+++. |..++.+
T Consensus 65 L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l 143 (312)
T 1wwl_A 65 IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAEL 143 (312)
T ss_dssp HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHH
T ss_pred HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHH
Confidence 88899999998 456777776 79999999999999999999986 8999999999999999977 7777776
Q ss_pred -----CCCCEEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCc--Cchhh--cCcCccCcccccccccCCC
Q 009771 173 -----RNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGT--IPKEI--GSLRNLKELDLSSNKLGGV 243 (526)
Q Consensus 173 -----~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~--~p~~l--~~l~~L~~L~l~~n~l~~~ 243 (526)
++|++|++++|.+++..|.. ++++++|++|++++|++.+. .+..+ +.+++|++|++++|.+++.
T Consensus 144 ~~~~~~~L~~L~L~~N~l~~~~~~~-------~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~ 216 (312)
T 1wwl_A 144 QQWLKPGLKVLSIAQAHSLNFSCEQ-------VRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETP 216 (312)
T ss_dssp HTTCCTTCCEEEEESCSCCCCCTTT-------CCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCH
T ss_pred HHhhcCCCcEEEeeCCCCccchHHH-------hccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcch
Confidence 99999999999998766554 46889999999999998876 34455 8899999999999998842
Q ss_pred --Cc-hhhhcCcCCCeeecccccCCCCCC-ccccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCC
Q 009771 244 --LP-QEIENLKSLTALSMDANNLGGPIP-STLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPST 319 (526)
Q Consensus 244 --~p-~~l~~l~~L~~L~l~~n~l~~~~p-~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~ 319 (526)
++ ..+..+++|++|++++|.+++..| ..+..+++|++|++++|.++ .+|..+. ++|++|++++|++++. |.
T Consensus 217 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~- 291 (312)
T 1wwl_A 217 SGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS- 291 (312)
T ss_dssp HHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-
T ss_pred HHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-
Confidence 22 334567888888888888887664 34455677777777777776 5665554 6677777777777654 44
Q ss_pred CCCCCcccEEECCCCcCCC
Q 009771 320 LGRLTSLQILDLSSNQLHS 338 (526)
Q Consensus 320 l~~l~~L~~L~Ls~n~l~~ 338 (526)
+..+++|++|++++|.+++
T Consensus 292 ~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 292 PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp TTTSCEEEEEECTTCTTTC
T ss_pred HhhCCCCCEEeccCCCCCC
Confidence 6666777777777776654
No 62
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=7.5e-27 Score=240.86 Aligned_cols=249 Identities=24% Similarity=0.235 Sum_probs=188.6
Q ss_pred CCCEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCc
Q 009771 150 NLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRN 229 (526)
Q Consensus 150 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~ 229 (526)
....++.+++.++ .+|..+. +++++|++++|.+++..|.. +.++++|++|++++|++++..+..|.++++
T Consensus 55 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~-------~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~ 124 (452)
T 3zyi_A 55 QFSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADT-------FRHLHHLEVLQLGRNSIRQIEVGAFNGLAS 124 (452)
T ss_dssp SSCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTT-------TTTCTTCCEEECCSSCCCEECTTTTTTCTT
T ss_pred CCcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHH-------cCCCCCCCEEECCCCccCCcChhhccCccc
Confidence 3567888888776 5776554 68899999999988766654 467888999999999988887788888888
Q ss_pred cCcccccccccCCCCchhhhcCcCCCeeecccccCCCCCCccccCCCccceeecccccCCCCCc-hhhhCCCCCcEEEee
Q 009771 230 LKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIP-REIVNLKNLTSLSLG 308 (526)
Q Consensus 230 L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p-~~l~~~~~L~~L~l~ 308 (526)
|++|+|++|.+++..+..+..+++|++|++++|.+.+..+..+..+++|+.|++++|...+.++ ..+..+++|++|+++
T Consensus 125 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~ 204 (452)
T 3zyi_A 125 LNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLG 204 (452)
T ss_dssp CCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECT
T ss_pred CCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECC
Confidence 9999998888887766678888888888888888876555677778888888888754444444 357777788888888
Q ss_pred CccCcCCCCCCCCCCCcccEEECCCCcCCCCCcccccCCCCCCeecCcCCcCcccCcccccCCCCCCEEecCCCcCcccc
Q 009771 309 GNKLTGHIPSTLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLLSGQI 388 (526)
Q Consensus 309 ~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 388 (526)
+|++++. | .+..+++|++|++++|.+++..|..+..+++|++|++++|++++..+..+..+++|+.|+|++|++++..
T Consensus 205 ~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 282 (452)
T 3zyi_A 205 MCNIKDM-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLP 282 (452)
T ss_dssp TSCCSSC-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCccccc-c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccC
Confidence 8877743 3 4667777777777777777777777777777777777777777777777777777777777777777666
Q ss_pred hHHhhcCcCCCEEEccCCcCcc
Q 009771 389 PFAIGKLFNLASLDLSKNKLSG 410 (526)
Q Consensus 389 ~~~~~~~~~L~~L~l~~n~l~~ 410 (526)
+..+..+++|++|++++|.+..
T Consensus 283 ~~~~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 283 HDLFTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp TTSSTTCTTCCEEECCSSCEEC
T ss_pred hHHhccccCCCEEEccCCCcCC
Confidence 6666777777777777776653
No 63
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=2.9e-26 Score=243.06 Aligned_cols=281 Identities=28% Similarity=0.325 Sum_probs=120.7
Q ss_pred CCCCCcccceeeCC-------CCCEEEEEcCCCceecccCCCCcCCCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEcc
Q 009771 61 TSDHCGWVGITCDY-------EGRITDIGLQKSNIKGELGRLNFSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLY 133 (526)
Q Consensus 61 ~~~~C~w~gv~C~~-------~~~v~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls 133 (526)
..++|.|.|..|.. ...++.+++++..... + +..+. ++|++|++++|+++ .+|. .+++|++|+|+
T Consensus 18 ~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~~-l-p~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls 89 (622)
T 3g06_A 18 AAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLTT-L-PDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVS 89 (622)
T ss_dssp TCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCSC-C-CSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEEC
T ss_pred cCCcchhccccccCcccccccCCCCcEEEecCCCcCc-c-ChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcC
Confidence 46788997753310 1224444544332221 1 11121 45555555555554 2333 34455555555
Q ss_pred CccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCcccccCCCCCCEEEccC
Q 009771 134 ENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSS 213 (526)
Q Consensus 134 ~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~ 213 (526)
+|.++ .+|. .+++|++|+|++|.+++ +|. .+++|++|++++|++++ +| . .+++|++|++++
T Consensus 90 ~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp-------~---~l~~L~~L~Ls~ 150 (622)
T 3g06_A 90 GNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LP-------V---LPPGLQELSVSD 150 (622)
T ss_dssp SCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CC-------C---CCTTCCEEECCS
T ss_pred CCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CC-------C---CCCCCCEEECcC
Confidence 55544 2333 34455555555555542 222 33445555555555443 11 1 124455555555
Q ss_pred CcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCeeecccccCCCCCCccccCCCccceeecccccCCCCCc
Q 009771 214 NKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIP 293 (526)
Q Consensus 214 n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p 293 (526)
|++++ +|. .+++|+.|++++|.+++ +| ..+++|+.|++++|.+++ +|.. .++|+.|++++|.++. +|
T Consensus 151 N~l~~-l~~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~-l~ 217 (622)
T 3g06_A 151 NQLAS-LPA---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LP 217 (622)
T ss_dssp SCCSC-CCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSS-CC
T ss_pred CcCCC-cCC---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCcccc-cC
Confidence 55442 222 12344444555554443 22 233444455555444442 2221 2344444444444442 22
Q ss_pred hhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCCCCCcccccCCCCCCeecCcCCcCcccCcccccCCCC
Q 009771 294 REIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICGIIPDELTKLSH 373 (526)
Q Consensus 294 ~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 373 (526)
. .+++|+.|++++|.+++ +| ..+++|+.|++++|.++ .+|. .+++|++|++++|+++ .+|..+..+++
T Consensus 218 ~---~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~ 285 (622)
T 3g06_A 218 A---LPSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSS 285 (622)
T ss_dssp C---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCT
T ss_pred C---CCCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccc
Confidence 1 12344444444444443 22 22344444444444444 2222 2344444444444444 33444444444
Q ss_pred CCEEecCCCcCcccchHHhh
Q 009771 374 LKYLNLSSNLLSGQIPFAIG 393 (526)
Q Consensus 374 L~~L~L~~n~l~~~~~~~~~ 393 (526)
|+.|++++|.+++.+|..+.
T Consensus 286 L~~L~L~~N~l~~~~~~~l~ 305 (622)
T 3g06_A 286 ETTVNLEGNPLSERTLQALR 305 (622)
T ss_dssp TCEEECCSCCCCHHHHHHHH
T ss_pred cCEEEecCCCCCCcCHHHHH
Confidence 44444444444444444333
No 64
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=4.8e-29 Score=244.92 Aligned_cols=265 Identities=20% Similarity=0.222 Sum_probs=173.0
Q ss_pred CEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCC
Q 009771 104 QYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGN 183 (526)
Q Consensus 104 ~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n 183 (526)
+..+++.+.+...+...+..+++|++|++++|.+++..|..|.++++|++|+|++|.+++..+ +..+++|++|++++|
T Consensus 13 ~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n 90 (317)
T 3o53_A 13 KIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNN 90 (317)
T ss_dssp EEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSS
T ss_pred eEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCC
Confidence 344555555543344445556677777777777776666667777777777777777765443 666777777777777
Q ss_pred cCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCeeeccccc
Q 009771 184 KLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANN 263 (526)
Q Consensus 184 ~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~ 263 (526)
.+++. ...++|++|++++|++++..+. .+ ++|+.|++++|.
T Consensus 91 ~l~~l------------~~~~~L~~L~l~~n~l~~~~~~---~~------------------------~~L~~L~l~~N~ 131 (317)
T 3o53_A 91 YVQEL------------LVGPSIETLHAANNNISRVSCS---RG------------------------QGKKNIYLANNK 131 (317)
T ss_dssp EEEEE------------EECTTCCEEECCSSCCSEEEEC---CC------------------------SSCEEEECCSSC
T ss_pred ccccc------------cCCCCcCEEECCCCccCCcCcc---cc------------------------CCCCEEECCCCC
Confidence 66532 1235666666666666543322 12 344555555555
Q ss_pred CCCCCCccccCCCccceeecccccCCCCCchhh-hCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCCCCCcc
Q 009771 264 LGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREI-VNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSIPL 342 (526)
Q Consensus 264 l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l-~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~ 342 (526)
+++..+..+..+++|++|++++|.+++..+..+ ..+++|++|++++|.+++. + ....+++|++|++++|.+++.. .
T Consensus 132 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~l~-~ 208 (317)
T 3o53_A 132 ITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFMG-P 208 (317)
T ss_dssp CCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEEC-G
T ss_pred CCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCcch-h
Confidence 544444455555666666666666665555544 3567777777777777654 2 2234778888888888887543 3
Q ss_pred cccCCCCCCeecCcCCcCcccCcccccCCCCCCEEecCCCcCc-ccchHHhhcCcCCCEEEccC-CcCccccc
Q 009771 343 VIGNFSALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLLS-GQIPFAIGKLFNLASLDLSK-NKLSGSIP 413 (526)
Q Consensus 343 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~~~~L~~L~l~~-n~l~~~~~ 413 (526)
.+..+++|++|++++|+++ .+|..+..+++|+.|++++|.++ +.++..++.++.|+.+++++ +.+.|..|
T Consensus 209 ~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~ 280 (317)
T 3o53_A 209 EFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNE 280 (317)
T ss_dssp GGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSS
T ss_pred hhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCch
Confidence 4777888888888888888 46777888888999999999888 77888888888888888874 34555443
No 65
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=2.5e-28 Score=239.77 Aligned_cols=248 Identities=23% Similarity=0.233 Sum_probs=205.5
Q ss_pred cCCCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCC
Q 009771 97 FSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLE 176 (526)
Q Consensus 97 ~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~ 176 (526)
+..+++|++|++++|.+++..|..+..+++|++|++++|.+++..| +..+++|++|++++|.+++. + ..++|+
T Consensus 30 ~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l-~----~~~~L~ 102 (317)
T 3o53_A 30 RQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQEL-L----VGPSIE 102 (317)
T ss_dssp HTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEE-E----ECTTCC
T ss_pred hccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCccccc-c----CCCCcC
Confidence 4567799999999999998888899999999999999999987654 89999999999999998743 2 348999
Q ss_pred EEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhh-hcCcCCC
Q 009771 177 TLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEI-ENLKSLT 255 (526)
Q Consensus 177 ~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l-~~l~~L~ 255 (526)
+|++++|.+++..+. .+++|++|++++|++++..+..++.+++|++|++++|.+++..+..+ ..+++|+
T Consensus 103 ~L~l~~n~l~~~~~~----------~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~ 172 (317)
T 3o53_A 103 TLHAANNNISRVSCS----------RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLE 172 (317)
T ss_dssp EEECCSSCCSEEEEC----------CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCC
T ss_pred EEECCCCccCCcCcc----------ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCC
Confidence 999999999876442 46789999999999998888889999999999999999998777766 4789999
Q ss_pred eeecccccCCCCCCccccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCc
Q 009771 256 ALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQ 335 (526)
Q Consensus 256 ~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~ 335 (526)
+|++++|.+++. + ....+++|++|++++|.+++ +|..+..+++|++|++++|.++ .+|..+..+++|+.|++++|.
T Consensus 173 ~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~ 248 (317)
T 3o53_A 173 HLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNG 248 (317)
T ss_dssp EEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCC
T ss_pred EEECCCCcCccc-c-cccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCC
Confidence 999999998754 2 23347889999999998885 4555888888888888888888 467778888888888888888
Q ss_pred CC-CCCcccccCCCCCCeecCcCC-cCcccCc
Q 009771 336 LH-SSIPLVIGNFSALSYLDLSDN-RICGIIP 365 (526)
Q Consensus 336 l~-~~~~~~~~~l~~L~~L~L~~n-~l~~~~~ 365 (526)
+. +.++..+..+++|+.+++.++ .+.|..+
T Consensus 249 ~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~ 280 (317)
T 3o53_A 249 FHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNE 280 (317)
T ss_dssp CBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSS
T ss_pred ccCcCHHHHHhccccceEEECCCchhccCCch
Confidence 87 667777788888888887744 4454444
No 66
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.94 E-value=1.6e-25 Score=237.34 Aligned_cols=268 Identities=27% Similarity=0.363 Sum_probs=213.4
Q ss_pred CCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEc
Q 009771 101 PNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSL 180 (526)
Q Consensus 101 ~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 180 (526)
.+++.|++++|+++ .+|..+. ++|++|++++|.++ .+|. .+++|++|+|++|.++ .+|. .+++|++|++
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~L 108 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSI 108 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEE
T ss_pred CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEEC
Confidence 46899999999998 7787775 89999999999998 5666 5789999999999997 4665 6789999999
Q ss_pred cCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCeeecc
Q 009771 181 DGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMD 260 (526)
Q Consensus 181 ~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~ 260 (526)
++|.+++. |. .+++|+.|++++|++++ +|.. +++|++|++++|.+++. |. .+++|+.|+++
T Consensus 109 s~N~l~~l--------~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~l-~~---~~~~L~~L~L~ 169 (622)
T 3g06_A 109 FSNPLTHL--------PA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLASL-PA---LPSELCKLWAY 169 (622)
T ss_dssp CSCCCCCC--------CC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSCC-CC---CCTTCCEEECC
T ss_pred cCCcCCCC--------CC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCCc-CC---ccCCCCEEECC
Confidence 99998853 22 56789999999999885 5543 48899999999998853 43 35688999999
Q ss_pred cccCCCCCCccccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCCCCC
Q 009771 261 ANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSI 340 (526)
Q Consensus 261 ~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~ 340 (526)
+|.+++ +| ..+++|+.|++++|.+++ +|. .+++|+.|++++|.++. +|.. +++|+.|++++|.+++ +
T Consensus 170 ~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l~~~---~~~L~~L~Ls~N~L~~-l 236 (622)
T 3g06_A 170 NNQLTS-LP---MLPSGLQELSVSDNQLAS-LPT---LPSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-L 236 (622)
T ss_dssp SSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-C
T ss_pred CCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCC---ccchhhEEECcCCcccc-cCCC---CCCCCEEEccCCccCc-C
Confidence 998875 55 446889999999998885 443 24788999999998873 4443 4788889999998885 5
Q ss_pred cccccCCCCCCeecCcCCcCcccCcccccCCCCCCEEecCCCcCcccchHHhhcCcCCCEEEccCCcCcccccccccCC
Q 009771 341 PLVIGNFSALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLLSGQIPFAIGKLFNLASLDLSKNKLSGSIPTEIGNC 419 (526)
Q Consensus 341 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l 419 (526)
| ..+++|++|++++|+++. +|. .+++|+.|++++|+++ .+|..++.+++|+.|++++|.+++..|..+..+
T Consensus 237 p---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L 307 (622)
T 3g06_A 237 P---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREI 307 (622)
T ss_dssp C---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHH
T ss_pred C---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhc
Confidence 5 456788899999988874 554 5678888888888888 678888888888888888888888777765543
No 67
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=9.4e-28 Score=249.25 Aligned_cols=237 Identities=23% Similarity=0.238 Sum_probs=178.1
Q ss_pred CCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEE
Q 009771 99 CFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETL 178 (526)
Q Consensus 99 ~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 178 (526)
.+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++.+| ++.+++|++|+|++|.+++.. ..++|++|
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-----~~~~L~~L 104 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETL 104 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE-----ECTTCCEE
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC-----CCCCcCEE
Confidence 44578888888888888777788888888888888888876654 788888888888888876432 23788888
Q ss_pred EccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhh-cCcCCCee
Q 009771 179 SLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIE-NLKSLTAL 257 (526)
Q Consensus 179 ~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~-~l~~L~~L 257 (526)
++++|.+++..+. .+++|+.|++++|.+++..|..++.+++|+.|++++|.+++.+|..+. .+++|+.|
T Consensus 105 ~L~~N~l~~~~~~----------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L 174 (487)
T 3oja_A 105 HAANNNISRVSCS----------RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHL 174 (487)
T ss_dssp ECCSSCCCCEEEC----------CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEE
T ss_pred ECcCCcCCCCCcc----------ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEE
Confidence 8888888765432 456788888888888887777788888888888888888877777765 67888888
Q ss_pred ecccccCCCCCCccccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCC
Q 009771 258 SMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLH 337 (526)
Q Consensus 258 ~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~ 337 (526)
++++|.+++.. ....+++|+.|+|++|.+++. |..+..+++|+.|++++|.+++ +|..+..+++|+.|++++|.+.
T Consensus 175 ~Ls~N~l~~~~--~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~ 250 (487)
T 3oja_A 175 NLQYNFIYDVK--GQVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFH 250 (487)
T ss_dssp ECTTSCCCEEE--CCCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBC
T ss_pred ecCCCcccccc--ccccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCc
Confidence 88888877542 233577788888888887763 4447777788888888887774 5666777777777777777776
Q ss_pred -CCCcccccCCCCCCeecCc
Q 009771 338 -SSIPLVIGNFSALSYLDLS 356 (526)
Q Consensus 338 -~~~~~~~~~l~~L~~L~L~ 356 (526)
+.+|..+..++.|+.+++.
T Consensus 251 c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 251 CGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp HHHHHHHHTTCHHHHHHHHH
T ss_pred CcchHHHHHhCCCCcEEecc
Confidence 5566666666666666654
No 68
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=1.3e-25 Score=215.24 Aligned_cols=218 Identities=25% Similarity=0.287 Sum_probs=110.8
Q ss_pred CCCCcccceeeCCCCCEEEEEcCCCceecccCCCCcCCCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccC
Q 009771 62 SDHCGWVGITCDYEGRITDIGLQKSNIKGELGRLNFSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTI 141 (526)
Q Consensus 62 ~~~C~w~gv~C~~~~~v~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~i 141 (526)
.+.|.|.|+.|...+.++.+++++..... + +..+ .+++++|++++|++++..+..|.++++|++|++++|.+++..
T Consensus 2 ~~~C~~~~~~C~c~~~~~~l~~~~~~l~~-i-p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~ 77 (270)
T 2o6q_A 2 EALCKKDGGVCSCNNNKNSVDCSSKKLTA-I-PSNI--PADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLP 77 (270)
T ss_dssp CCCBGGGTCSBEEETTTTEEECTTSCCSS-C-CSCC--CTTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCC
T ss_pred CccCCCCCCCCEeCCCCCEEEccCCCCCc-c-CCCC--CCCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeC
Confidence 48999999999643434445444322221 0 1111 134555555555554433344445555555555555544333
Q ss_pred CcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCc
Q 009771 142 PKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIP 221 (526)
Q Consensus 142 p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p 221 (526)
+..|.++++|++|++++|.+.+..+..+.+++ +|++|++++|++++..+
T Consensus 78 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~-------------------------------~L~~L~l~~n~l~~~~~ 126 (270)
T 2o6q_A 78 AGIFKELKNLETLWVTDNKLQALPIGVFDQLV-------------------------------NLAELRLDRNQLKSLPP 126 (270)
T ss_dssp TTTTSSCTTCCEEECCSSCCCCCCTTTTTTCS-------------------------------SCCEEECCSSCCCCCCT
T ss_pred hhhhcCCCCCCEEECCCCcCCcCCHhHccccc-------------------------------CCCEEECCCCccCeeCH
Confidence 33334445555555555554433333344444 45555555555444444
Q ss_pred hhhcCcCccCcccccccccCCCCchhhhcCcCCCeeecccccCCCCCCccccCCCccceeecccccCCCCCchhhhCCCC
Q 009771 222 KEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKN 301 (526)
Q Consensus 222 ~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~ 301 (526)
..|+.+++|++|++++|.+++..+..+..+++|+.|++++|.+++..+..+..+++|++|++++|.+++..+..+..+++
T Consensus 127 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 206 (270)
T 2o6q_A 127 RVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEK 206 (270)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTT
T ss_pred HHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccC
Confidence 44455555555555555555444444455555555555555555444444555556666666666665444444555666
Q ss_pred CcEEEeeCccCcC
Q 009771 302 LTSLSLGGNKLTG 314 (526)
Q Consensus 302 L~~L~l~~n~l~~ 314 (526)
|+.|++++|.+..
T Consensus 207 L~~L~l~~N~~~c 219 (270)
T 2o6q_A 207 LKMLQLQENPWDC 219 (270)
T ss_dssp CCEEECCSSCBCC
T ss_pred CCEEEecCCCeeC
Confidence 6666666666543
No 69
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=7.1e-28 Score=250.18 Aligned_cols=235 Identities=23% Similarity=0.243 Sum_probs=152.7
Q ss_pred CCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCcccccCCC
Q 009771 125 SNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLR 204 (526)
Q Consensus 125 ~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~ 204 (526)
++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..| ++.+++|++|++++|.+++.. ..+
T Consensus 34 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~------------~~~ 99 (487)
T 3oja_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL------------VGP 99 (487)
T ss_dssp GGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE------------ECT
T ss_pred CCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC------------CCC
Confidence 378888888888887777778888888888888888876554 777778888888887766431 225
Q ss_pred CCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCeeecccccCCCCCCccccCCCccceeecc
Q 009771 205 NLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLG 284 (526)
Q Consensus 205 ~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~ 284 (526)
+|++|++++|.+++..+. .+++|+.|++++|.+++ ..|..+..+++|+.|+++
T Consensus 100 ~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~------------------------~~~~~~~~l~~L~~L~Ls 152 (487)
T 3oja_A 100 SIETLHAANNNISRVSCS---RGQGKKNIYLANNKITM------------------------LRDLDEGCRSRVQYLDLK 152 (487)
T ss_dssp TCCEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCS------------------------GGGBCGGGGSSEEEEECT
T ss_pred CcCEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCC------------------------CCchhhcCCCCCCEEECC
Confidence 677777777766654332 23445555555555444 444444555555555555
Q ss_pred cccCCCCCchhhh-CCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCCCCCcccccCCCCCCeecCcCCcCccc
Q 009771 285 FNRFNGSIPREIV-NLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICGI 363 (526)
Q Consensus 285 ~n~l~g~~p~~l~-~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 363 (526)
+|.+++..|..+. .+++|+.|++++|.+++..+ +..+++|+.|++++|.+++..| .+..+++|+.|++++|.+++
T Consensus 153 ~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~- 228 (487)
T 3oja_A 153 LNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL- 228 (487)
T ss_dssp TSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-
T ss_pred CCCCCCcChHHHhhhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-
Confidence 5555555555544 45666666666666654422 2346677777777777765433 36667777777777777774
Q ss_pred CcccccCCCCCCEEecCCCcCc-ccchHHhhcCcCCCEEEcc
Q 009771 364 IPDELTKLSHLKYLNLSSNLLS-GQIPFAIGKLFNLASLDLS 404 (526)
Q Consensus 364 ~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~~~~L~~L~l~ 404 (526)
+|..+..+++|+.|++++|.++ +.+|..++.++.|+.++++
T Consensus 229 lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 229 IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred cchhhccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 5666777777777777777776 5666777777777766664
No 70
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.93 E-value=1e-27 Score=256.14 Aligned_cols=331 Identities=12% Similarity=0.075 Sum_probs=218.0
Q ss_pred CCCCCCEEeCCCCCCCCC----CchhccCCCCCCEEEccCccCC----ccCCcccCCCCCCCEEEccCCCCCCCCccccC
Q 009771 99 CFPNLQYLDLGSNNLSGS----IPSQIDSLSNLTYIYLYENNLT----GTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIG 170 (526)
Q Consensus 99 ~l~~L~~L~l~~n~~~~~----~p~~l~~l~~L~~L~Ls~n~~~----~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~ 170 (526)
.+++|++|+|++|.+++. ++..+..+++|++|++++|.++ +.++..+.++++|++|++++|.+.+ +|..+.
T Consensus 162 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~ 240 (592)
T 3ogk_B 162 HCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFK 240 (592)
T ss_dssp HCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHH
T ss_pred hCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHh
Confidence 445566666655555433 3333445555666666655554 2233334455566666666655543 444555
Q ss_pred CCCCCCEEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCc-hhhh
Q 009771 171 SVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLP-QEIE 249 (526)
Q Consensus 171 ~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p-~~l~ 249 (526)
++++|++|+++.+... ++ ....+..+..+++|+.|+++++. .+.+|..+..+++|++|++++|.+++... ..+.
T Consensus 241 ~~~~L~~L~l~~~~~~--~~--~~~~~~~l~~~~~L~~L~l~~~~-~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~ 315 (592)
T 3ogk_B 241 AAANLEEFCGGSLNED--IG--MPEKYMNLVFPRKLCRLGLSYMG-PNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQ 315 (592)
T ss_dssp HCTTCCEEEECBCCCC--TT--CTTSSSCCCCCTTCCEEEETTCC-TTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHT
T ss_pred hhhHHHhhcccccccc--cc--hHHHHHHhhccccccccCccccc-hhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHH
Confidence 5566666666542211 11 01223345677788888887753 34667777788899999999888665433 3357
Q ss_pred cCcCCCeeecccccCCCCCCccccCCCccceeeccc-----------ccCCCC-CchhhhCCCCCcEEEeeCccCcCCCC
Q 009771 250 NLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGF-----------NRFNGS-IPREIVNLKNLTSLSLGGNKLTGHIP 317 (526)
Q Consensus 250 ~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~-----------n~l~g~-~p~~l~~~~~L~~L~l~~n~l~~~~p 317 (526)
.+++|+.|+++++...+.++.....+++|++|++++ +.+++. ++.....+++|++|+++.|.+++..+
T Consensus 316 ~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~ 395 (592)
T 3ogk_B 316 KCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESL 395 (592)
T ss_dssp TCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHH
T ss_pred hCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHH
Confidence 888999999884322223333345678899999993 555543 22334568999999998888887665
Q ss_pred CCCCC-CCcccEEECC----CCcCCCC-----CcccccCCCCCCeecCcCCc--CcccCccccc-CCCCCCEEecCCCcC
Q 009771 318 STLGR-LTSLQILDLS----SNQLHSS-----IPLVIGNFSALSYLDLSDNR--ICGIIPDELT-KLSHLKYLNLSSNLL 384 (526)
Q Consensus 318 ~~l~~-l~~L~~L~Ls----~n~l~~~-----~~~~~~~l~~L~~L~L~~n~--l~~~~~~~~~-~l~~L~~L~L~~n~l 384 (526)
..++. +++|+.|+++ .|.+++. ++..+..+++|++|++++|. +++..+..+. .+++|++|++++|.+
T Consensus 396 ~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l 475 (592)
T 3ogk_B 396 ESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGE 475 (592)
T ss_dssp HHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCS
T ss_pred HHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCC
Confidence 55555 7889999996 6667653 33446678999999997543 6665555444 478999999999999
Q ss_pred cc-cchHHhhcCcCCCEEEccCCcCccc-ccccccCCCCCCeEEcCCCCCCch
Q 009771 385 SG-QIPFAIGKLFNLASLDLSKNKLSGS-IPTEIGNCSELRNLTLNHNSLNGK 435 (526)
Q Consensus 385 ~~-~~~~~~~~~~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~l~l~~n~l~~~ 435 (526)
++ .++..+..+++|++|++++|.+++. ++..+..+++|+.|++++|+++.+
T Consensus 476 ~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 476 SDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp SHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTT
T ss_pred CHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHH
Confidence 86 4556668899999999999998765 344456789999999999998755
No 71
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=1.1e-24 Score=209.54 Aligned_cols=148 Identities=23% Similarity=0.264 Sum_probs=102.4
Q ss_pred CCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEc
Q 009771 101 PNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSL 180 (526)
Q Consensus 101 ~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 180 (526)
++|++|++++|++++..+..+.++++|++|++++|.+++..+..|.++++|++|++++|.+++..+..+.++++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 46788888888877666667777888888888888777666667777788888888888777666667777777777777
Q ss_pred cCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCc-CchhhcCcCccCcccccccccCCCCchhhhcCcCCC
Q 009771 181 DGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGT-IPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLT 255 (526)
Q Consensus 181 ~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~-~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~ 255 (526)
++|.+++..+. .++++++|++|++++|++++. +|..++++++|++|++++|++++..+..+..+++|+
T Consensus 108 ~~n~l~~~~~~-------~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 176 (276)
T 2z62_A 108 VETNLASLENF-------PIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMP 176 (276)
T ss_dssp TTSCCCCSTTC-------CCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCT
T ss_pred CCCCccccCch-------hcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhcc
Confidence 77777654332 235666777777777776652 466666666666666666666655555555554444
No 72
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=1.7e-24 Score=208.09 Aligned_cols=225 Identities=25% Similarity=0.251 Sum_probs=124.8
Q ss_pred EEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCCc
Q 009771 105 YLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNK 184 (526)
Q Consensus 105 ~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~ 184 (526)
..+..+.++. .+|..+. ++|++|++++|.+++..+..|.++++|++|++++|.+++..+..+.++++|++|++++|.
T Consensus 11 ~~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 87 (276)
T 2z62_A 11 TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87 (276)
T ss_dssp EEECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred eEEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCc
Confidence 3455555544 3555443 467888888888776666677777888888888887776555567777777777777777
Q ss_pred CCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCC-CchhhhcCcCCCeeeccccc
Q 009771 185 LSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGV-LPQEIENLKSLTALSMDANN 263 (526)
Q Consensus 185 l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~-~p~~l~~l~~L~~L~l~~n~ 263 (526)
+++..+.. +.++++|++|++++|.+.+..+..++++++|++|++++|.+++. +|..+..+++|++|++++|.
T Consensus 88 l~~~~~~~-------~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~ 160 (276)
T 2z62_A 88 IQSLALGA-------FSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNK 160 (276)
T ss_dssp CCEECTTT-------TTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSC
T ss_pred cCccChhh-------hcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCC
Confidence 76554432 34666777777777766655544555666666666666655542 34455555555555555554
Q ss_pred CCCCCCccccCCCccceeecccccCCCCCchhhhCCCCCc-EEEeeCccCcCCCCCCCCCCCcccEEECCCCcCCCCCcc
Q 009771 264 LGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLT-SLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSIPL 342 (526)
Q Consensus 264 l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~-~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~ 342 (526)
+++..+..+..+++|+ .+. .|++++|.+.+..+..+ ...+|++|++++|.+++..+.
T Consensus 161 l~~~~~~~~~~l~~L~---------------------~l~l~L~ls~n~l~~~~~~~~-~~~~L~~L~L~~n~l~~~~~~ 218 (276)
T 2z62_A 161 IQSIYCTDLRVLHQMP---------------------LLNLSLDLSLNPMNFIQPGAF-KEIRLKELALDTNQLKSVPDG 218 (276)
T ss_dssp CCEECGGGGHHHHTCT---------------------TCCEEEECCSSCCCEECTTSS-CSCCEEEEECCSSCCSCCCTT
T ss_pred CCcCCHHHhhhhhhcc---------------------ccceeeecCCCcccccCcccc-CCCcccEEECCCCceeecCHh
Confidence 4433333333322222 111 45555555543322222 222455555555555443333
Q ss_pred cccCCCCCCeecCcCCcCc
Q 009771 343 VIGNFSALSYLDLSDNRIC 361 (526)
Q Consensus 343 ~~~~l~~L~~L~L~~n~l~ 361 (526)
.+..+++|++|++++|.+.
T Consensus 219 ~~~~l~~L~~L~l~~N~~~ 237 (276)
T 2z62_A 219 IFDRLTSLQKIWLHTNPWD 237 (276)
T ss_dssp TTTTCCSCCEEECCSSCBC
T ss_pred HhcccccccEEEccCCccc
Confidence 3444444445555444444
No 73
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=2.5e-24 Score=206.46 Aligned_cols=209 Identities=26% Similarity=0.318 Sum_probs=116.7
Q ss_pred cCCCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCC
Q 009771 97 FSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLE 176 (526)
Q Consensus 97 ~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~ 176 (526)
+..+++|+.|++++|.++. + +.+..+++|++|++++|.+++. +.++++++|++|++++|.+++..+..++++++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 112 (272)
T 3rfs_A 37 QNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLK 112 (272)
T ss_dssp HHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred cccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCC
Confidence 3345666666666666553 2 2456666666666666666642 3566666666666666666655555566666666
Q ss_pred EEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCe
Q 009771 177 TLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTA 256 (526)
Q Consensus 177 ~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~ 256 (526)
+|++++|.+++..+.. ++++++|++|++++|++++..+..++.+++|++|++++|++++..+..++.+++|+.
T Consensus 113 ~L~L~~n~l~~~~~~~-------~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 185 (272)
T 3rfs_A 113 ELVLVENQLQSLPDGV-------FDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKD 185 (272)
T ss_dssp EEECTTSCCCCCCTTT-------TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred EEECCCCcCCccCHHH-------hccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCE
Confidence 6666666665443322 245556666666666666554544555566666666666555554444555555555
Q ss_pred eecccccCCCCCCccccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCC
Q 009771 257 LSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRL 323 (526)
Q Consensus 257 L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l 323 (526)
|++++|.+++..+..+..+++|+.|++++|.+.+. +++|+.++++.|.++|.+|..++.+
T Consensus 186 L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~ 245 (272)
T 3rfs_A 186 LRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSV 245 (272)
T ss_dssp EECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSCB
T ss_pred EECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCccccc
Confidence 55555555554444445555555555555544432 2344444455555555555444433
No 74
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=2.8e-24 Score=206.10 Aligned_cols=164 Identities=28% Similarity=0.346 Sum_probs=95.9
Q ss_pred cCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCeeecccccCCCCCCccccCCCccce
Q 009771 201 ESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEY 280 (526)
Q Consensus 201 ~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~ 280 (526)
..+++|++|++++|.+++..+..++++++|++|++++|++++..+..++.+++|++|++++|.+++..+..+..+++|+.
T Consensus 82 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 161 (272)
T 3rfs_A 82 KELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTE 161 (272)
T ss_dssp TTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred cCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCE
Confidence 34445555555555554444444455555555555555555444444555555556666555555444444555666666
Q ss_pred eecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCCCCCcccccCCCCCCeecCcCCcC
Q 009771 281 LSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRI 360 (526)
Q Consensus 281 L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l 360 (526)
|++++|.+++..+..+..+++|++|++++|.+++..+..+..+++|++|++++|.+.+. ++.++.|+++.|.+
T Consensus 162 L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~ 234 (272)
T 3rfs_A 162 LDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKH 234 (272)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHT
T ss_pred EECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhC
Confidence 66666666655555556666666666666666665555566666777777777665532 34566666777777
Q ss_pred cccCcccccCC
Q 009771 361 CGIIPDELTKL 371 (526)
Q Consensus 361 ~~~~~~~~~~l 371 (526)
+|.+|..++.+
T Consensus 235 ~g~ip~~~~~~ 245 (272)
T 3rfs_A 235 SGVVRNSAGSV 245 (272)
T ss_dssp GGGBBCTTSCB
T ss_pred CCcccCccccc
Confidence 77666655543
No 75
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.91 E-value=7.5e-27 Score=235.85 Aligned_cols=234 Identities=21% Similarity=0.267 Sum_probs=138.6
Q ss_pred cCCCCCCCEEEccCC---cCCccCCcccccCcccccCCCCCCEEEccCCcCCC----cCchhhcCcCccCcccccccccC
Q 009771 169 IGSVRNLETLSLDGN---KLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSG----TIPKEIGSLRNLKELDLSSNKLG 241 (526)
Q Consensus 169 l~~l~~L~~L~L~~n---~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~----~~p~~l~~l~~L~~L~l~~n~l~ 241 (526)
+.++++|++|++++| .+++.+|..+..+...+..+++|++|++++|.+++ .+|..+.++++|++|++++|.++
T Consensus 56 l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~ 135 (386)
T 2ca6_A 56 IASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLG 135 (386)
T ss_dssp TTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCH
T ss_pred HHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCC
Confidence 344445555555443 23334444433344444556666666666666655 24455555666666666666554
Q ss_pred CCCchhhhcCcCCCeeecccccCCCCCCccccCCCccceeecccccCC-CCCc---hhhhCCCCCcEEEeeCccCcC---
Q 009771 242 GVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFN-GSIP---REIVNLKNLTSLSLGGNKLTG--- 314 (526)
Q Consensus 242 ~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~-g~~p---~~l~~~~~L~~L~l~~n~l~~--- 314 (526)
+..+..+... +.. +..+.+.+. .++|++|++++|.++ +.++ ..+..+++|++|++++|.+..
T Consensus 136 ~~~~~~l~~~--l~~--l~~~~~~~~-------~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~ 204 (386)
T 2ca6_A 136 PQAGAKIARA--LQE--LAVNKKAKN-------APPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGI 204 (386)
T ss_dssp HHHHHHHHHH--HHH--HHHHHHHHT-------CCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHH
T ss_pred HHHHHHHHHH--HHH--Hhhhhhccc-------CCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHH
Confidence 3322222211 000 000000000 045555555555554 2333 345566777777777777652
Q ss_pred --CCCCCCCCCCcccEEECCCCcCC----CCCcccccCCCCCCeecCcCCcCccc----Ccccc--cCCCCCCEEecCCC
Q 009771 315 --HIPSTLGRLTSLQILDLSSNQLH----SSIPLVIGNFSALSYLDLSDNRICGI----IPDEL--TKLSHLKYLNLSSN 382 (526)
Q Consensus 315 --~~p~~l~~l~~L~~L~Ls~n~l~----~~~~~~~~~l~~L~~L~L~~n~l~~~----~~~~~--~~l~~L~~L~L~~n 382 (526)
..+..+..+++|++|++++|.++ +.+|..+..+++|++|++++|.+++. ++..+ +.+++|++|+|++|
T Consensus 205 ~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n 284 (386)
T 2ca6_A 205 EHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYN 284 (386)
T ss_dssp HHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSS
T ss_pred HHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCC
Confidence 23336667777778888877775 45666777788888888888888765 45555 33788899999999
Q ss_pred cCcc----cchHHh-hcCcCCCEEEccCCcCccccc
Q 009771 383 LLSG----QIPFAI-GKLFNLASLDLSKNKLSGSIP 413 (526)
Q Consensus 383 ~l~~----~~~~~~-~~~~~L~~L~l~~n~l~~~~~ 413 (526)
.+++ .+|..+ .++++|++|++++|.+++..+
T Consensus 285 ~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 285 EIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp CCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred cCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 8887 477777 668899999999999887664
No 76
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.91 E-value=3.5e-23 Score=198.20 Aligned_cols=204 Identities=28% Similarity=0.328 Sum_probs=161.1
Q ss_pred CCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCcccccCCCC
Q 009771 126 NLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRN 205 (526)
Q Consensus 126 ~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~ 205 (526)
+.++++++++.++ .+|..+. ++|++|++++|.+++..+..+.++++|++|++++|.++...+.. +.++++
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~-------~~~l~~ 86 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGI-------FKELKN 86 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTT-------TSSCTT
T ss_pred CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhh-------hcCCCC
Confidence 3455666666655 3454443 45666666666666544456666677777777777666432222 246778
Q ss_pred CCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCeeecccccCCCCCCccccCCCccceeeccc
Q 009771 206 LQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGF 285 (526)
Q Consensus 206 L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~ 285 (526)
|++|++++|++++..+..+..+++|++|++++|.+++..+..+..+++|++|++++|.+++..+..+..+++|+.|++++
T Consensus 87 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 166 (270)
T 2o6q_A 87 LETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYN 166 (270)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecC
Confidence 88888888888776667788999999999999999998888899999999999999999977667788999999999999
Q ss_pred ccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCCCC
Q 009771 286 NRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSS 339 (526)
Q Consensus 286 n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~ 339 (526)
|.+++..+..+..+++|++|++++|.+++..+..+..+++|+.|++++|.+...
T Consensus 167 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 167 NQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp SCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCS
T ss_pred CcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCC
Confidence 999987777799999999999999999977777789999999999999998654
No 77
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.91 E-value=4.1e-26 Score=225.91 Aligned_cols=211 Identities=17% Similarity=0.192 Sum_probs=118.8
Q ss_pred CCcccceeeCCCCCEEEEEcCCCceecccCCCCcCCC--CCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCcc-
Q 009771 64 HCGWVGITCDYEGRITDIGLQKSNIKGELGRLNFSCF--PNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGT- 140 (526)
Q Consensus 64 ~C~w~gv~C~~~~~v~~l~l~~~~~~~~~~~~~~~~l--~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~- 140 (526)
|..|.++.|+ ...++.+++++.... +..+..+ ++++.|++++|.+.+..+. +..+++|++|++++|.+++.
T Consensus 36 c~~W~~~~~~-~~~~~~l~l~~~~~~----~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~ 109 (336)
T 2ast_B 36 CKRWYRLASD-ESLWQTLDLTGKNLH----PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVST 109 (336)
T ss_dssp CHHHHHHHTC-STTSSEEECTTCBCC----HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHH
T ss_pred HHHHHHHhcC-chhheeeccccccCC----HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHH
Confidence 3369998886 344566666543221 1223344 5666777776666655443 44566677777766666654
Q ss_pred CCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCC-cCCccCCcccccCcccccCCCCCCEEEccCC-cCCC
Q 009771 141 IPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGN-KLSGVLPIYFGTIPIEIESLRNLQWLDLSSN-KLSG 218 (526)
Q Consensus 141 ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n-~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n-~l~~ 218 (526)
+|..+..+++|++|++++|.+++..+..++.+++|++|++++| .+++. .++..+.++++|++|++++| .+++
T Consensus 110 ~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~------~l~~~~~~~~~L~~L~l~~~~~l~~ 183 (336)
T 2ast_B 110 LHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEF------ALQTLLSSCSRLDELNLSWCFDFTE 183 (336)
T ss_dssp HHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHH------HHHHHHHHCTTCCEEECCCCTTCCH
T ss_pred HHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHH------HHHHHHhcCCCCCEEcCCCCCCcCh
Confidence 5556666666666666666666556666666666666666666 44431 11222345566666666666 5554
Q ss_pred c-CchhhcCcC-ccCccccccc--ccC-CCCchhhhcCcCCCeeeccccc-CCCCCCccccCCCccceeecccc
Q 009771 219 T-IPKEIGSLR-NLKELDLSSN--KLG-GVLPQEIENLKSLTALSMDANN-LGGPIPSTLFRLTNIEYLSLGFN 286 (526)
Q Consensus 219 ~-~p~~l~~l~-~L~~L~l~~n--~l~-~~~p~~l~~l~~L~~L~l~~n~-l~~~~p~~l~~~~~L~~L~L~~n 286 (526)
. ++..+..++ +|++|++++| .++ +.++..+..+++|+.|++++|. +++..+..+..+++|++|++++|
T Consensus 184 ~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~ 257 (336)
T 2ast_B 184 KHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRC 257 (336)
T ss_dssp HHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTC
T ss_pred HHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCC
Confidence 3 344455555 6666666665 333 3344444555555555555555 44444444445555555555554
No 78
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=3.4e-23 Score=200.24 Aligned_cols=203 Identities=26% Similarity=0.274 Sum_probs=114.4
Q ss_pred cCCCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCC
Q 009771 97 FSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLE 176 (526)
Q Consensus 97 ~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~ 176 (526)
+.++++++.+++++++++ .+|..+. +++++|++++|.+++..|..|.++++|++|+|++|.+++. +. .+.+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~-~~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-QV-DGTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-EC-CSCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcc-cC-CCCCCcCC
Confidence 445666666666666665 3444443 4666666666666655556666666666666666666532 22 14555566
Q ss_pred EEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCe
Q 009771 177 TLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTA 256 (526)
Q Consensus 177 ~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~ 256 (526)
+|++++|.++ .+|..+..+++|++|++++|++++..+..| ..+++|++
T Consensus 81 ~L~Ls~N~l~--------~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~------------------------~~l~~L~~ 128 (290)
T 1p9a_G 81 TLDLSHNQLQ--------SLPLLGQTLPALTVLDVSFNRLTSLPLGAL------------------------RGLGELQE 128 (290)
T ss_dssp EEECCSSCCS--------SCCCCTTTCTTCCEEECCSSCCCCCCSSTT------------------------TTCTTCCE
T ss_pred EEECCCCcCC--------cCchhhccCCCCCEEECCCCcCcccCHHHH------------------------cCCCCCCE
Confidence 6666655554 122233444555555555555554444444 44445555
Q ss_pred eecccccCCCCCCccccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcC
Q 009771 257 LSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQL 336 (526)
Q Consensus 257 L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l 336 (526)
|++++|.+++..+..+..+++|+.|++++|++++..+..+..+++|+.|++++|+++ .+|..+....+|+.+++++|.+
T Consensus 129 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~ 207 (290)
T 1p9a_G 129 LYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPW 207 (290)
T ss_dssp EECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCB
T ss_pred EECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCc
Confidence 555555554443444445555666666666665443344555666666666666666 4556666666777777777766
Q ss_pred C
Q 009771 337 H 337 (526)
Q Consensus 337 ~ 337 (526)
.
T Consensus 208 ~ 208 (290)
T 1p9a_G 208 L 208 (290)
T ss_dssp C
T ss_pred c
Confidence 4
No 79
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.90 E-value=1.7e-25 Score=238.84 Aligned_cols=324 Identities=16% Similarity=0.074 Sum_probs=245.2
Q ss_pred cCCCCCCCEEeCCCCCCCC----CCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCC---CCCcccc
Q 009771 97 FSCFPNLQYLDLGSNNLSG----SIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLN---GTIPIEI 169 (526)
Q Consensus 97 ~~~l~~L~~L~l~~n~~~~----~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~---~~~p~~l 169 (526)
+..+++|++|++++|.+++ .++..+.++++|++|++++|.+.+ +|..+.++++|++|+++..... +..+..+
T Consensus 188 ~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l 266 (592)
T 3ogk_B 188 AQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNL 266 (592)
T ss_dssp HHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCC
T ss_pred HhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHh
Confidence 3468999999999999973 456667789999999999999885 7788899999999999864332 3445678
Q ss_pred CCCCCCCEEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCc-hhhcCcCccCcccccccccCCCCchhh
Q 009771 170 GSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIP-KEIGSLRNLKELDLSSNKLGGVLPQEI 248 (526)
Q Consensus 170 ~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p-~~l~~l~~L~~L~l~~n~l~~~~p~~l 248 (526)
..+++|+.|+++++.. + .+|..+..+++|++|++++|.+++... ..+..+++|++|+++++-..+.++...
T Consensus 267 ~~~~~L~~L~l~~~~~-~-------~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~ 338 (592)
T 3ogk_B 267 VFPRKLCRLGLSYMGP-N-------EMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLA 338 (592)
T ss_dssp CCCTTCCEEEETTCCT-T-------TGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHH
T ss_pred hccccccccCccccch-h-------HHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHH
Confidence 8899999999988532 2 344455678899999999999775544 446889999999999443333445555
Q ss_pred hcCcCCCeeeccc-----------ccCCCC-CCccccCCCccceeecccccCCCCCchhhhC-CCCCcEEEee----Ccc
Q 009771 249 ENLKSLTALSMDA-----------NNLGGP-IPSTLFRLTNIEYLSLGFNRFNGSIPREIVN-LKNLTSLSLG----GNK 311 (526)
Q Consensus 249 ~~l~~L~~L~l~~-----------n~l~~~-~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~-~~~L~~L~l~----~n~ 311 (526)
..+++|++|++++ |.+++. ++.....+++|++|+++.|.+++..+..+.. +++|+.|+++ .|.
T Consensus 339 ~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~ 418 (592)
T 3ogk_B 339 QYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREER 418 (592)
T ss_dssp HHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSC
T ss_pred HhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCcc
Confidence 7889999999993 455432 2222345899999999999998877777766 9999999997 566
Q ss_pred CcCC-----CCCCCCCCCcccEEECCCCc--CCCCCcccc-cCCCCCCeecCcCCcCccc-CcccccCCCCCCEEecCCC
Q 009771 312 LTGH-----IPSTLGRLTSLQILDLSSNQ--LHSSIPLVI-GNFSALSYLDLSDNRICGI-IPDELTKLSHLKYLNLSSN 382 (526)
Q Consensus 312 l~~~-----~p~~l~~l~~L~~L~Ls~n~--l~~~~~~~~-~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~n 382 (526)
+++. ++..+.++++|++|+++.|. +++..+..+ ..+++|++|++++|++++. ++..+..+++|++|++++|
T Consensus 419 l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n 498 (592)
T 3ogk_B 419 ITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGC 498 (592)
T ss_dssp CSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESC
T ss_pred ccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCC
Confidence 7653 33335678999999998644 555444444 3488999999999999873 4555678999999999999
Q ss_pred cCccc-chHHhhcCcCCCEEEccCCcCccccccccc-CCCCCCeEEcCC
Q 009771 383 LLSGQ-IPFAIGKLFNLASLDLSKNKLSGSIPTEIG-NCSELRNLTLNH 429 (526)
Q Consensus 383 ~l~~~-~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~-~l~~L~~l~l~~ 429 (526)
.+++. ++..+..+++|++|++++|++++.....+. .++.+....+..
T Consensus 499 ~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~~ 547 (592)
T 3ogk_B 499 CFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPS 547 (592)
T ss_dssp CCBHHHHHHHHHHCSSCCEEEEESCBCCTTCTTGGGGCCTTEEEEEECC
T ss_pred CCcHHHHHHHHHhcCccCeeECcCCcCCHHHHHHHHHhCCCcEEEEecC
Confidence 98765 455567899999999999999876444443 566665555544
No 80
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=4.7e-23 Score=199.20 Aligned_cols=204 Identities=26% Similarity=0.254 Sum_probs=155.4
Q ss_pred ccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCcccc
Q 009771 121 IDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEI 200 (526)
Q Consensus 121 l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l 200 (526)
+++++++++++++++.++ .+|..+. +++++|+|++|.+++..+..+.++++|++|++++|.+++..+ .
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~---------~ 73 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV---------D 73 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC---------C
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC---------C
Confidence 556777777777777776 4555443 567777777777776666667777777777777776654211 1
Q ss_pred cCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCeeecccccCCCCCCccccCCCccce
Q 009771 201 ESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEY 280 (526)
Q Consensus 201 ~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~ 280 (526)
+.+++|++|++++|++ + .+|..+..+++|+.|++++|++++..+..+..+++|++
T Consensus 74 ~~l~~L~~L~Ls~N~l------------------------~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~ 128 (290)
T 1p9a_G 74 GTLPVLGTLDLSHNQL------------------------Q-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQE 128 (290)
T ss_dssp SCCTTCCEEECCSSCC------------------------S-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCE
T ss_pred CCCCcCCEEECCCCcC------------------------C-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCE
Confidence 3445555555555544 3 33444566677788888888887766778899999999
Q ss_pred eecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCCCCCcccccCCCCCCeecCcCCcC
Q 009771 281 LSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRI 360 (526)
Q Consensus 281 L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l 360 (526)
|++++|++++..+..+..+++|+.|++++|++++..+..+..+++|+.|++++|+++ .+|..+....+|+.+++++|.+
T Consensus 129 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~ 207 (290)
T 1p9a_G 129 LYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPW 207 (290)
T ss_dssp EECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCB
T ss_pred EECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCc
Confidence 999999999877777889999999999999999766667789999999999999998 6788888889999999999988
Q ss_pred cc
Q 009771 361 CG 362 (526)
Q Consensus 361 ~~ 362 (526)
..
T Consensus 208 ~C 209 (290)
T 1p9a_G 208 LC 209 (290)
T ss_dssp CC
T ss_pred cC
Confidence 64
No 81
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.90 E-value=8e-26 Score=228.33 Aligned_cols=252 Identities=23% Similarity=0.296 Sum_probs=174.2
Q ss_pred CccccCCCCCCCEEEccCCcCCccCCcccccCcccccCCCCCCEEEccCC---cCCCcCchhhcCcCccCcccccccccC
Q 009771 165 IPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSN---KLSGTIPKEIGSLRNLKELDLSSNKLG 241 (526)
Q Consensus 165 ~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n---~l~~~~p~~l~~l~~L~~L~l~~n~l~ 241 (526)
++..+..+++|++|++++|.+++..+.. ++..+.++++|++|++++| ++++.+|..+..+
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~---l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l-------------- 86 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARW---LSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLL-------------- 86 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHH---HHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHH--------------
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHH---HHHHHHhCCCccEEeCcccccCccccchhHHHHHH--------------
Confidence 3444455566666666666655433221 2223456667777777664 3334444433100
Q ss_pred CCCchhhhcCcCCCeeecccccCCC----CCCccccCCCccceeecccccCCCCCch----hhhCC---------CCCcE
Q 009771 242 GVLPQEIENLKSLTALSMDANNLGG----PIPSTLFRLTNIEYLSLGFNRFNGSIPR----EIVNL---------KNLTS 304 (526)
Q Consensus 242 ~~~p~~l~~l~~L~~L~l~~n~l~~----~~p~~l~~~~~L~~L~L~~n~l~g~~p~----~l~~~---------~~L~~ 304 (526)
...+..+++|++|++++|.+++ .+|..+..+++|++|+|++|.+++..+. .+..+ ++|++
T Consensus 87 ---~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~ 163 (386)
T 2ca6_A 87 ---LQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRS 163 (386)
T ss_dssp ---HHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCE
T ss_pred ---HHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcE
Confidence 0122455555555555555554 2444555566666666666666533222 23333 89999
Q ss_pred EEeeCccCc-CCCC---CCCCCCCcccEEECCCCcCCC-----CCcccccCCCCCCeecCcCCcCc----ccCcccccCC
Q 009771 305 LSLGGNKLT-GHIP---STLGRLTSLQILDLSSNQLHS-----SIPLVIGNFSALSYLDLSDNRIC----GIIPDELTKL 371 (526)
Q Consensus 305 L~l~~n~l~-~~~p---~~l~~l~~L~~L~Ls~n~l~~-----~~~~~~~~l~~L~~L~L~~n~l~----~~~~~~~~~l 371 (526)
|++++|+++ +.++ ..+..+++|++|++++|.++. ..+..+..+++|++|++++|.++ +.+|..+..+
T Consensus 164 L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~ 243 (386)
T 2ca6_A 164 IICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSW 243 (386)
T ss_dssp EECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGC
T ss_pred EECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccC
Confidence 999999997 3444 356678899999999999973 34447788999999999999997 6678888999
Q ss_pred CCCCEEecCCCcCccc----chHHhhc--CcCCCEEEccCCcCcc----cccccc-cCCCCCCeEEcCCCCCCchh
Q 009771 372 SHLKYLNLSSNLLSGQ----IPFAIGK--LFNLASLDLSKNKLSG----SIPTEI-GNCSELRNLTLNHNSLNGKL 436 (526)
Q Consensus 372 ~~L~~L~L~~n~l~~~----~~~~~~~--~~~L~~L~l~~n~l~~----~~~~~~-~~l~~L~~l~l~~n~l~~~~ 436 (526)
++|++|+|++|.+++. ++..+.. +++|++|++++|.+++ .+|..+ .++++|+.|++++|+++.+.
T Consensus 244 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 244 PNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp TTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred CCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 9999999999999876 5666643 8999999999999998 577777 67899999999999998544
No 82
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=4.5e-23 Score=195.20 Aligned_cols=158 Identities=25% Similarity=0.289 Sum_probs=70.3
Q ss_pred CCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCcccccCCCC
Q 009771 126 NLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRN 205 (526)
Q Consensus 126 ~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~ 205 (526)
+|++|++++|.+.+..+..|.++++|++|+|++|.+++..+..+.++++|++|++++|.+++..+.. +..+++
T Consensus 36 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~-------~~~l~~ 108 (251)
T 3m19_A 36 DTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGV-------FDHLTQ 108 (251)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTT-------TTTCTT
T ss_pred CCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhH-------hcccCC
Confidence 4444444444444444444444444444444444444444444444444444444444444322221 133444
Q ss_pred CCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCeeecccccCCCCCCccccCCCccceeeccc
Q 009771 206 LQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGF 285 (526)
Q Consensus 206 L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~ 285 (526)
|++|++++|++++..+..|..+++|++|++++|++++..+..+..+++|+.|++++|.+++..+..+..+++|+.|++++
T Consensus 109 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 188 (251)
T 3m19_A 109 LDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFG 188 (251)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeC
Confidence 44444444444433333344444444444444444443333444444444444444444443333444444444444444
Q ss_pred ccCCC
Q 009771 286 NRFNG 290 (526)
Q Consensus 286 n~l~g 290 (526)
|.+.+
T Consensus 189 N~~~c 193 (251)
T 3m19_A 189 NQFDC 193 (251)
T ss_dssp CCBCT
T ss_pred CceeC
Confidence 44443
No 83
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=1.4e-23 Score=205.29 Aligned_cols=224 Identities=19% Similarity=0.235 Sum_probs=141.6
Q ss_pred CCCCEEeCCCCCCCCCC-ch--hccCCCCCCEEEccCccCCccCCccc--CCCCCCCEEEccCCCCCCCCc----cccCC
Q 009771 101 PNLQYLDLGSNNLSGSI-PS--QIDSLSNLTYIYLYENNLTGTIPKEI--GSLRNLEVLDLGSNNLNGTIP----IEIGS 171 (526)
Q Consensus 101 ~~L~~L~l~~n~~~~~~-p~--~l~~l~~L~~L~Ls~n~~~~~ip~~l--~~l~~L~~L~L~~n~l~~~~p----~~l~~ 171 (526)
..++.+.+.++.++... .. .+..+++|++|++++|.+.+.+|..+ ..+++|++|+|++|.+++..+ ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 45677777777665321 10 12234668888888888887777777 778888888888888876544 33456
Q ss_pred CCCCCEEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCc--C--chhhcCcCccCcccccccccCCCCch-
Q 009771 172 VRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGT--I--PKEIGSLRNLKELDLSSNKLGGVLPQ- 246 (526)
Q Consensus 172 l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~--~--p~~l~~l~~L~~L~l~~n~l~~~~p~- 246 (526)
+++|++|++++|.+++..|.. ++++++|++|++++|++.+. + +..++.+++|++|++++|+++. ++.
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~-------~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~ 215 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQ-------VRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGV 215 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTS-------CCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHH
T ss_pred ccCCCEEEeeCCCcchhhHHH-------hccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHH
Confidence 778888888888877655443 35677888888888876642 2 1223567778888888877752 222
Q ss_pred ---hhhcCcCCCeeecccccCCCCCCccccCC---CccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCC
Q 009771 247 ---EIENLKSLTALSMDANNLGGPIPSTLFRL---TNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTL 320 (526)
Q Consensus 247 ---~l~~l~~L~~L~l~~n~l~~~~p~~l~~~---~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l 320 (526)
.++.+++|++|++++|.+++..|..+..+ ++|++|++++|+++ .+|..+. ++|++|++++|++++. |. +
T Consensus 216 ~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~ 290 (310)
T 4glp_A 216 CAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-P 290 (310)
T ss_dssp HHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-T
T ss_pred HHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-h
Confidence 24566777777777777776666655554 46666666666665 4454442 5556666666655542 21 3
Q ss_pred CCCCcccEEECCCCcCC
Q 009771 321 GRLTSLQILDLSSNQLH 337 (526)
Q Consensus 321 ~~l~~L~~L~Ls~n~l~ 337 (526)
..+++|+.|++++|.++
T Consensus 291 ~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 291 DELPEVDNLTLDGNPFL 307 (310)
T ss_dssp TSCCCCSCEECSSTTTS
T ss_pred hhCCCccEEECcCCCCC
Confidence 44455555555555544
No 84
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.90 E-value=5.8e-25 Score=217.61 Aligned_cols=255 Identities=20% Similarity=0.209 Sum_probs=129.0
Q ss_pred CCEEEccCccCCccCCcccCCC--CCCCEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCcccccCCC
Q 009771 127 LTYIYLYENNLTGTIPKEIGSL--RNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLR 204 (526)
Q Consensus 127 L~~L~Ls~n~~~~~ip~~l~~l--~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~ 204 (526)
++.++++++.+. |..+..+ +++++|++++|.+.+..+. +.++++|++|++++|.+++. .+|..+..++
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~------~~~~~~~~~~ 118 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVS------TLHGILSQCS 118 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHH------HHHHHHTTBC
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHH------HHHHHHhhCC
Confidence 566666666554 2334444 5666666666666554443 34556666666666655432 0122234555
Q ss_pred CCCEEEccCCcCCCcCchhhcCcCccCccccccc-ccCCC-CchhhhcCcCCCeeecccccCCCCCCccccCCCccceee
Q 009771 205 NLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSN-KLGGV-LPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLS 282 (526)
Q Consensus 205 ~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n-~l~~~-~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~ 282 (526)
+|++|++++|.+++..+..++.+++|++|++++| .+++. ++..+..+++|++|++++|.
T Consensus 119 ~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~------------------- 179 (336)
T 2ast_B 119 KLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCF------------------- 179 (336)
T ss_dssp CCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCT-------------------
T ss_pred CCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCC-------------------
Confidence 5666666665555555555555555555555555 34431 33334444455555554440
Q ss_pred cccccCCCC-CchhhhCCC-CCcEEEeeCc--cCc-CCCCCCCCCCCcccEEECCCCc-CCCCCcccccCCCCCCeecCc
Q 009771 283 LGFNRFNGS-IPREIVNLK-NLTSLSLGGN--KLT-GHIPSTLGRLTSLQILDLSSNQ-LHSSIPLVIGNFSALSYLDLS 356 (526)
Q Consensus 283 L~~n~l~g~-~p~~l~~~~-~L~~L~l~~n--~l~-~~~p~~l~~l~~L~~L~Ls~n~-l~~~~~~~~~~l~~L~~L~L~ 356 (526)
.+++. ++..+..++ +|++|++++| .++ +.++..+..+++|++|++++|. +++..+..+..+++|++|+++
T Consensus 180 ----~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~ 255 (336)
T 2ast_B 180 ----DFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLS 255 (336)
T ss_dssp ----TCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECT
T ss_pred ----CcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCC
Confidence 33322 333444445 5555555555 232 2233334444555555555555 444444445555556666666
Q ss_pred CCc-CcccCcccccCCCCCCEEecCCCcCcccchHHhhcCcCCCEEEccCCcCccccccccc
Q 009771 357 DNR-ICGIIPDELTKLSHLKYLNLSSNLLSGQIPFAIGKLFNLASLDLSKNKLSGSIPTEIG 417 (526)
Q Consensus 357 ~n~-l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~ 417 (526)
+|. +.......+..+++|++|++++| ++...-..+. ..+..|++++|.+++..|..++
T Consensus 256 ~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~~~~~~~l~--~~l~~L~l~~n~l~~~~~~~~~ 314 (336)
T 2ast_B 256 RCYDIIPETLLELGEIPTLKTLQVFGI-VPDGTLQLLK--EALPHLQINCSHFTTIARPTIG 314 (336)
T ss_dssp TCTTCCGGGGGGGGGCTTCCEEECTTS-SCTTCHHHHH--HHSTTSEESCCCSCCTTCSSCS
T ss_pred CCCCCCHHHHHHHhcCCCCCEEeccCc-cCHHHHHHHH--hhCcceEEecccCccccCCccc
Confidence 553 22222224555666777777666 4433222222 1345555677777776666554
No 85
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=6.2e-25 Score=219.72 Aligned_cols=264 Identities=18% Similarity=0.200 Sum_probs=149.3
Q ss_pred EEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCC----cccCCCC-CCCEEEccCCCCCCCCccccCCC-----CC
Q 009771 105 YLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIP----KEIGSLR-NLEVLDLGSNNLNGTIPIEIGSV-----RN 174 (526)
Q Consensus 105 ~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip----~~l~~l~-~L~~L~L~~n~l~~~~p~~l~~l-----~~ 174 (526)
+++++.|+++|.+|..+...++|++|+|++|.+++..+ ..+.+++ +|++|+|++|.+++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 45777888888877777777778888888888876555 5666777 78888888888876666655554 77
Q ss_pred CCEEEccCCcCCccCCcccccCcccccCC-CCCCEEEccCCcCCCcCchhhcC-----cCccCcccccccccCCCCchh-
Q 009771 175 LETLSLDGNKLSGVLPIYFGTIPIEIESL-RNLQWLDLSSNKLSGTIPKEIGS-----LRNLKELDLSSNKLGGVLPQE- 247 (526)
Q Consensus 175 L~~L~L~~n~l~~~~p~~~~~ip~~l~~l-~~L~~L~l~~n~l~~~~p~~l~~-----l~~L~~L~l~~n~l~~~~p~~- 247 (526)
|++|++++|.+++..+..+. ..+..+ ++|++|++++|++++..+..+.. .++|++|++++|.+++..+..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~---~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l 158 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELV---KTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDEL 158 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHH---HHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHH
T ss_pred ccEEECcCCcCChHHHHHHH---HHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHH
Confidence 78888888777765444321 123344 67777777777776655544332 246777777777666433332
Q ss_pred ---hhcCc-CCCeeecccccCCCCCCcccc----CC-CccceeecccccCCCC----CchhhhC-CCCCcEEEeeCccCc
Q 009771 248 ---IENLK-SLTALSMDANNLGGPIPSTLF----RL-TNIEYLSLGFNRFNGS----IPREIVN-LKNLTSLSLGGNKLT 313 (526)
Q Consensus 248 ---l~~l~-~L~~L~l~~n~l~~~~p~~l~----~~-~~L~~L~L~~n~l~g~----~p~~l~~-~~~L~~L~l~~n~l~ 313 (526)
+...+ +|++|++++|.+++..+..+. .+ ++|++|++++|.+++. ++..+.. .++|++|++++|.++
T Consensus 159 ~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~ 238 (362)
T 3goz_A 159 IQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLH 238 (362)
T ss_dssp HHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCC
T ss_pred HHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCC
Confidence 23333 566666666655544433222 22 3555555555555432 2223322 234555555555444
Q ss_pred CCCCCCCCCCCcccEEECCCCcCCCCCcccccCCCCCCeecCcCCcCccc-------CcccccCCCCCCEEecCCCcCcc
Q 009771 314 GHIPSTLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICGI-------IPDELTKLSHLKYLNLSSNLLSG 386 (526)
Q Consensus 314 ~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-------~~~~~~~l~~L~~L~L~~n~l~~ 386 (526)
+..+.. +...+..+++|++|++++|.+.+. ++..+..+++|+.|++++|.+.+
T Consensus 239 ~~~~~~--------------------l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~ 298 (362)
T 3goz_A 239 GPSLEN--------------------LKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHP 298 (362)
T ss_dssp CCCHHH--------------------HHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCG
T ss_pred cHHHHH--------------------HHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCC
Confidence 322100 012223445555555555542221 22234455666666666666665
Q ss_pred cchHH
Q 009771 387 QIPFA 391 (526)
Q Consensus 387 ~~~~~ 391 (526)
..+..
T Consensus 299 ~~~~~ 303 (362)
T 3goz_A 299 SHSIP 303 (362)
T ss_dssp GGCHH
T ss_pred cchHH
Confidence 54433
No 86
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=4.6e-25 Score=220.63 Aligned_cols=265 Identities=21% Similarity=0.198 Sum_probs=160.1
Q ss_pred EEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCc----cccCCCC-CCCEEEccCCcCCccCCcccccCcccccCC
Q 009771 129 YIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIP----IEIGSVR-NLETLSLDGNKLSGVLPIYFGTIPIEIESL 203 (526)
Q Consensus 129 ~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p----~~l~~l~-~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l 203 (526)
++.+++|.++|.+|..+...++|++|+|++|.+++..+ ..+.+++ +|++|++++|.+++..+..+.. .+...
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~---~l~~~ 78 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQ---ILAAI 78 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHH---HHHTS
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHH---HHhcc
Confidence 45677777777777766666667777777777765554 4556666 6777777777766554433211 11222
Q ss_pred -CCCCEEEccCCcCCCcCchhhcCc-----CccCcccccccccCCCCchhhhcCcCCCeeecccccCCCCCCccccC-CC
Q 009771 204 -RNLQWLDLSSNKLSGTIPKEIGSL-----RNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFR-LT 276 (526)
Q Consensus 204 -~~L~~L~l~~n~l~~~~p~~l~~l-----~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~-~~ 276 (526)
++|++|++++|++++..+..+... ++|++|++++|.+++..+..+... +.. .+
T Consensus 79 ~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~--------------------l~~~~~ 138 (362)
T 3goz_A 79 PANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQA--------------------FSNLPA 138 (362)
T ss_dssp CTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHH--------------------HTTSCT
T ss_pred CCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHH--------------------HHhCCC
Confidence 566666666666665555433332 556666666666555444333221 111 13
Q ss_pred ccceeecccccCCCCC----chhhhCCC-CCcEEEeeCccCcCCCCCCC----CCC-CcccEEECCCCcCCCC----Ccc
Q 009771 277 NIEYLSLGFNRFNGSI----PREIVNLK-NLTSLSLGGNKLTGHIPSTL----GRL-TSLQILDLSSNQLHSS----IPL 342 (526)
Q Consensus 277 ~L~~L~L~~n~l~g~~----p~~l~~~~-~L~~L~l~~n~l~~~~p~~l----~~l-~~L~~L~Ls~n~l~~~----~~~ 342 (526)
+|++|++++|.+++.. +..+..++ +|++|++++|.+++..+..+ ..+ ++|++|++++|.+++. ++.
T Consensus 139 ~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~ 218 (362)
T 3goz_A 139 SITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAY 218 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHH
T ss_pred ceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHH
Confidence 4555555555544322 22333343 66666666666655443322 233 4777777777777653 333
Q ss_pred cccC-CCCCCeecCcCCcCcccCc----ccccCCCCCCEEecCCCcCcccc-------hHHhhcCcCCCEEEccCCcCcc
Q 009771 343 VIGN-FSALSYLDLSDNRICGIIP----DELTKLSHLKYLNLSSNLLSGQI-------PFAIGKLFNLASLDLSKNKLSG 410 (526)
Q Consensus 343 ~~~~-l~~L~~L~L~~n~l~~~~~----~~~~~l~~L~~L~L~~n~l~~~~-------~~~~~~~~~L~~L~l~~n~l~~ 410 (526)
.+.. .++|++|++++|.+++..+ ..+..+++|+.|++++|.+.+.. +..+..+++|++||+++|.+.+
T Consensus 219 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~ 298 (362)
T 3goz_A 219 IFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHP 298 (362)
T ss_dssp HHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCG
T ss_pred HHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCC
Confidence 4444 3589999999998887544 33467789999999999854433 2345677889999999999987
Q ss_pred cccccc
Q 009771 411 SIPTEI 416 (526)
Q Consensus 411 ~~~~~~ 416 (526)
..+..+
T Consensus 299 ~~~~~~ 304 (362)
T 3goz_A 299 SHSIPI 304 (362)
T ss_dssp GGCHHH
T ss_pred cchHHH
Confidence 755443
No 87
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=2e-23 Score=204.09 Aligned_cols=204 Identities=20% Similarity=0.231 Sum_probs=174.2
Q ss_pred CCCCCEEeCCCCCCCCCCchhc--cCCCCCCEEEccCccCCccCC----cccCCCCCCCEEEccCCCCCCCCccccCCCC
Q 009771 100 FPNLQYLDLGSNNLSGSIPSQI--DSLSNLTYIYLYENNLTGTIP----KEIGSLRNLEVLDLGSNNLNGTIPIEIGSVR 173 (526)
Q Consensus 100 l~~L~~L~l~~n~~~~~~p~~l--~~l~~L~~L~Ls~n~~~~~ip----~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~ 173 (526)
+++|++|++++|.+.+..|..+ ..+++|++|++++|.+++..| ..+..+++|++|+|++|.+.+..|..+++++
T Consensus 90 ~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~ 169 (310)
T 4glp_A 90 YSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFP 169 (310)
T ss_dssp HSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCT
T ss_pred cCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCC
Confidence 4679999999999999999888 899999999999999998665 3456799999999999999988888999999
Q ss_pred CCCEEEccCCcCCcc--CCcccccCcccccCCCCCCEEEccCCcCCCcCch----hhcCcCccCcccccccccCCCCchh
Q 009771 174 NLETLSLDGNKLSGV--LPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPK----EIGSLRNLKELDLSSNKLGGVLPQE 247 (526)
Q Consensus 174 ~L~~L~L~~n~l~~~--~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~----~l~~l~~L~~L~l~~n~l~~~~p~~ 247 (526)
+|++|++++|++.+. ++. +..++.+++|++|++++|+++. ++. .++.+++|++|++++|++++..|..
T Consensus 170 ~L~~L~Ls~N~l~~~~~~~~-----~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~ 243 (310)
T 4glp_A 170 ALTSLDLSDNPGLGERGLMA-----ALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPS 243 (310)
T ss_dssp TCCEEECCSCTTCHHHHHHT-----TSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSC
T ss_pred CCCEEECCCCCCccchhhhH-----HHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhh
Confidence 999999999998763 111 1123578899999999999973 232 2578899999999999999988877
Q ss_pred hhcC---cCCCeeecccccCCCCCCccccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcC
Q 009771 248 IENL---KSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTG 314 (526)
Q Consensus 248 l~~l---~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~ 314 (526)
+..+ ++|++|++++|.++ .+|..+. ++|+.|++++|++++. |. +..+++|+.|++++|.++.
T Consensus 244 ~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 244 APRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred HHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 7776 69999999999998 6777764 8999999999999974 43 6788999999999999874
No 88
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.89 E-value=1.1e-25 Score=240.39 Aligned_cols=136 Identities=13% Similarity=0.092 Sum_probs=88.9
Q ss_pred CCCCcEEEeeCccCcCCCCCCCC-CCCcccEEECC--C----CcCCCC-----CcccccCCCCCCeecCcCCcCcccCcc
Q 009771 299 LKNLTSLSLGGNKLTGHIPSTLG-RLTSLQILDLS--S----NQLHSS-----IPLVIGNFSALSYLDLSDNRICGIIPD 366 (526)
Q Consensus 299 ~~~L~~L~l~~n~l~~~~p~~l~-~l~~L~~L~Ls--~----n~l~~~-----~~~~~~~l~~L~~L~L~~n~l~~~~~~ 366 (526)
+++|++|.+..|.+++..+..+. .+++|+.|+++ + +.++.. ++..+..+++|++|++++ .+++..+.
T Consensus 371 ~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~ 449 (594)
T 2p1m_B 371 CPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFE 449 (594)
T ss_dssp CTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHH
T ss_pred chhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHH
Confidence 56666666666666544333333 36777777777 3 344321 122245667788888876 56655555
Q ss_pred cccC-CCCCCEEecCCCcCcccchHHh-hcCcCCCEEEccCCcCcccccc-cccCCCCCCeEEcCCCCCCch
Q 009771 367 ELTK-LSHLKYLNLSSNLLSGQIPFAI-GKLFNLASLDLSKNKLSGSIPT-EIGNCSELRNLTLNHNSLNGK 435 (526)
Q Consensus 367 ~~~~-l~~L~~L~L~~n~l~~~~~~~~-~~~~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~l~l~~n~l~~~ 435 (526)
.+.. +++|+.|++++|.+++..+..+ ..+++|++|++++|.+++.... .+..+++|+.|++++|+++++
T Consensus 450 ~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~ 521 (594)
T 2p1m_B 450 YIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFG 521 (594)
T ss_dssp HHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHH
T ss_pred HHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHH
Confidence 5544 7788888888888876655555 6688888888888888654443 344578888888888888654
No 89
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.88 E-value=3.5e-22 Score=187.62 Aligned_cols=86 Identities=19% Similarity=0.185 Sum_probs=51.0
Q ss_pred CCCEEeCCCCCCCCCCchhccCCCCCCEEEccCcc-CCccCCcccCCCCCCCEEEccC-CCCCCCCccccCCCCCCCEEE
Q 009771 102 NLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENN-LTGTIPKEIGSLRNLEVLDLGS-NNLNGTIPIEIGSVRNLETLS 179 (526)
Q Consensus 102 ~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~-~~~~ip~~l~~l~~L~~L~L~~-n~l~~~~p~~l~~l~~L~~L~ 179 (526)
+|++|++++|++++..+..+.++++|++|++++|. +++..+..|.++++|++|++++ |.+++..+..+.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 56666666666665544556666666666666665 5544444556666666666665 666544444555566666666
Q ss_pred ccCCcCCc
Q 009771 180 LDGNKLSG 187 (526)
Q Consensus 180 L~~n~l~~ 187 (526)
+++|.+++
T Consensus 112 l~~n~l~~ 119 (239)
T 2xwt_C 112 IFNTGLKM 119 (239)
T ss_dssp EEEECCCS
T ss_pred CCCCCCcc
Confidence 66665553
No 90
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.88 E-value=7.7e-22 Score=181.14 Aligned_cols=185 Identities=23% Similarity=0.264 Sum_probs=139.3
Q ss_pred CCcccceeeCCCCCEEEEEcCCCceecccCCCCcCCCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCc
Q 009771 64 HCGWVGITCDYEGRITDIGLQKSNIKGELGRLNFSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPK 143 (526)
Q Consensus 64 ~C~w~gv~C~~~~~v~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~ 143 (526)
.|.|.+|.|+..+ ++. ....-.++|++|++++|++++..+..++.+++|++|++++|.+++..+.
T Consensus 6 ~C~~~~v~c~~~~-l~~--------------~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 70 (208)
T 2o6s_A 6 SCSGTTVECYSQG-RTS--------------VPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNG 70 (208)
T ss_dssp EEETTEEECCSSC-CSS--------------CCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTT
T ss_pred EECCCEEEecCCC-ccC--------------CCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChh
Confidence 4689999997432 111 1122346899999999999876666788899999999999999876666
Q ss_pred ccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchh
Q 009771 144 EIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKE 223 (526)
Q Consensus 144 ~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~ 223 (526)
.|..+++|++|++++|.+++..+..+.++++|++|++++|.+++..+.. +.++++|++|++++|++++..+..
T Consensus 71 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~-------~~~l~~L~~L~l~~N~l~~~~~~~ 143 (208)
T 2o6s_A 71 VFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGV-------FDKLTQLKDLRLYQNQLKSVPDGV 143 (208)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTT-------TTTCTTCCEEECCSSCCSCCCTTT
T ss_pred hcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhH-------hccCCcCCEEECCCCccceeCHHH
Confidence 6788999999999999988666666788889999999988887654432 357778888888888888666666
Q ss_pred hcCcCccCcccccccccCCCCchhhhcCcCCCeeecccccCCCCCCccccCCCc
Q 009771 224 IGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTN 277 (526)
Q Consensus 224 l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~ 277 (526)
+..+++|++|++++|.+.+. +++|++|+++.|.++|.+|..++.++.
T Consensus 144 ~~~l~~L~~L~l~~N~~~~~-------~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 144 FDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp TTTCTTCCEEECCSCCBCCC-------TTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred hccCCCccEEEecCCCeecC-------CCCHHHHHHHHHhCCceeeccCccccC
Confidence 77788888888888876643 346777777777777777776665543
No 91
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=7.4e-22 Score=192.63 Aligned_cols=194 Identities=25% Similarity=0.395 Sum_probs=124.2
Q ss_pred cCCCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCC
Q 009771 97 FSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLE 176 (526)
Q Consensus 97 ~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~ 176 (526)
+..+++|++|++++|.++. ++ .+..+++|++|++++|.+++. +. +..+++|++|++++|.+++ ++ .+.++++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~-~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~ 110 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDL-AP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIK 110 (308)
T ss_dssp HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCC
T ss_pred HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCC-hh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCC
Confidence 3456677888888777764 34 577778888888888877753 33 7777788888888877764 33 577777777
Q ss_pred EEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCe
Q 009771 177 TLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTA 256 (526)
Q Consensus 177 ~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~ 256 (526)
+|++++|.+++. + .+..+++|++|++++|++++..+ ++.+++|++|++++|.+++..+ +..+++|+.
T Consensus 111 ~L~l~~n~l~~~--------~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~ 177 (308)
T 1h6u_A 111 TLDLTSTQITDV--------T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTT 177 (308)
T ss_dssp EEECTTSCCCCC--------G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCE
T ss_pred EEECCCCCCCCc--------h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCE
Confidence 777777777642 1 24566777777777777764433 6666667777777766664322 566666666
Q ss_pred eecccccCCCCCCccccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCc
Q 009771 257 LSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLT 313 (526)
Q Consensus 257 L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~ 313 (526)
|++++|.+++..+ +..+++|+.|++++|.+++.. .+..+++|+.|++++|.++
T Consensus 178 L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 178 LKADDNKISDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTIT 230 (308)
T ss_dssp EECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEE
T ss_pred EECCCCccCcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeee
Confidence 6666666654322 455566666666666655433 2555556666666665554
No 92
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.87 E-value=1.7e-24 Score=231.14 Aligned_cols=332 Identities=16% Similarity=0.156 Sum_probs=214.7
Q ss_pred CCCCCCCEEeCCCCCCCCCCchhcc-CCCCCCEEEccCc-cCCcc-CCcccCCCCCCCEEEccCCCCCCCCcccc----C
Q 009771 98 SCFPNLQYLDLGSNNLSGSIPSQID-SLSNLTYIYLYEN-NLTGT-IPKEIGSLRNLEVLDLGSNNLNGTIPIEI----G 170 (526)
Q Consensus 98 ~~l~~L~~L~l~~n~~~~~~p~~l~-~l~~L~~L~Ls~n-~~~~~-ip~~l~~l~~L~~L~L~~n~l~~~~p~~l----~ 170 (526)
..+++|++|++++|.+++..+..+. .+++|++|++++| .++.. ++..+.++++|++|+|++|.+++..+..+ .
T Consensus 102 ~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~ 181 (594)
T 2p1m_B 102 SSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPD 181 (594)
T ss_dssp HHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCT
T ss_pred HhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhh
Confidence 3578899999998888877666665 6889999999888 44432 44445578899999999888766544333 3
Q ss_pred CCCCCCEEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccc-----------
Q 009771 171 SVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNK----------- 239 (526)
Q Consensus 171 ~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~----------- 239 (526)
.+++|++|++++|. +.++. ..++.-+.++++|++|++++|...+.++..+.++++|++|+++.+.
T Consensus 182 ~~~~L~~L~l~~~~--~~~~~--~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l 257 (594)
T 2p1m_B 182 TYTSLVSLNISCLA--SEVSF--SALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGL 257 (594)
T ss_dssp TCCCCCEEECTTCC--SCCCH--HHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHHH
T ss_pred cCCcCcEEEecccC--CcCCH--HHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHHH
Confidence 66789999998886 11111 0112223457889999998883333366667777778777754431
Q ss_pred ---------------cC----CCCchhhhcCcCCCeeecccccCCCCCC-ccccCCCccceeecccccCCC-CCchhhhC
Q 009771 240 ---------------LG----GVLPQEIENLKSLTALSMDANNLGGPIP-STLFRLTNIEYLSLGFNRFNG-SIPREIVN 298 (526)
Q Consensus 240 ---------------l~----~~~p~~l~~l~~L~~L~l~~n~l~~~~p-~~l~~~~~L~~L~L~~n~l~g-~~p~~l~~ 298 (526)
+. +.++..+..+++|++|++++|.+++... ..+..+++|++|++++| ++. .++.....
T Consensus 258 ~~~l~~~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~ 336 (594)
T 2p1m_B 258 SVALSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLAST 336 (594)
T ss_dssp HHHHHTCTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHH
T ss_pred HHHHhcCCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHh
Confidence 11 1123333356677777777766543221 22345677777777766 322 12222334
Q ss_pred CCCCcEEEeeC---------ccCcCCCCCCC-CCCCcccEEECCCCcCCCCCccccc-CCCCCCeecCc--C----CcCc
Q 009771 299 LKNLTSLSLGG---------NKLTGHIPSTL-GRLTSLQILDLSSNQLHSSIPLVIG-NFSALSYLDLS--D----NRIC 361 (526)
Q Consensus 299 ~~~L~~L~l~~---------n~l~~~~p~~l-~~l~~L~~L~Ls~n~l~~~~~~~~~-~l~~L~~L~L~--~----n~l~ 361 (526)
+++|++|++.+ +.+++.....+ ..+++|+.|.+..|.+++..+..+. .+++|+.|+++ + +.++
T Consensus 337 ~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~ 416 (594)
T 2p1m_B 337 CKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLT 416 (594)
T ss_dssp CTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTT
T ss_pred CCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCccccc
Confidence 67777777743 23332211111 2367788887777777665444443 57889999998 3 4555
Q ss_pred c-----cCcccccCCCCCCEEecCCCcCcccchHHhhc-CcCCCEEEccCCcCcccccccc-cCCCCCCeEEcCCCCCCc
Q 009771 362 G-----IIPDELTKLSHLKYLNLSSNLLSGQIPFAIGK-LFNLASLDLSKNKLSGSIPTEI-GNCSELRNLTLNHNSLNG 434 (526)
Q Consensus 362 ~-----~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-~~~L~~L~l~~n~l~~~~~~~~-~~l~~L~~l~l~~n~l~~ 434 (526)
+ .++..+..+++|+.|++++ .+++..+..++. +++|++|++++|.+++.....+ ..+++|+.|++++|.++.
T Consensus 417 ~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~ 495 (594)
T 2p1m_B 417 LEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGD 495 (594)
T ss_dssp CCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCH
T ss_pred CCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcH
Confidence 2 1222356778999999977 777666666665 8899999999999987665555 678999999999999964
Q ss_pred h
Q 009771 435 K 435 (526)
Q Consensus 435 ~ 435 (526)
+
T Consensus 496 ~ 496 (594)
T 2p1m_B 496 K 496 (594)
T ss_dssp H
T ss_pred H
Confidence 3
No 93
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.87 E-value=4.1e-21 Score=181.71 Aligned_cols=178 Identities=26% Similarity=0.309 Sum_probs=110.2
Q ss_pred CCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCcccccCCCCC
Q 009771 127 LTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNL 206 (526)
Q Consensus 127 L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L 206 (526)
.++++++++.++ .+|..+. ++|++|+|++|.+.+..+..+.++++|++|++++|.+++..+.. +.++++|
T Consensus 16 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~-------~~~l~~L 85 (251)
T 3m19_A 16 KKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGV-------FDDLTEL 85 (251)
T ss_dssp GTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTT-------TTTCTTC
T ss_pred CeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhH-------hccCCcC
Confidence 345666666665 4555444 57888888888888777777888888888888888877654433 3566777
Q ss_pred CEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCeeecccccCCCCCCccccCCCccceeecccc
Q 009771 207 QWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFN 286 (526)
Q Consensus 207 ~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n 286 (526)
++|++++|++++..+..|..+++|++|++++|.+++..+..+..+++|+.|++++|.+++..+
T Consensus 86 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~----------------- 148 (251)
T 3m19_A 86 GTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPA----------------- 148 (251)
T ss_dssp CEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT-----------------
T ss_pred CEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCH-----------------
Confidence 777777777776555566666666666666666665444444555555555555555544333
Q ss_pred cCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCCC
Q 009771 287 RFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHS 338 (526)
Q Consensus 287 ~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~ 338 (526)
..+..+++|++|++++|++++..+..+..+++|+.|++++|.+.+
T Consensus 149 -------~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 149 -------GAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp -------TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCT
T ss_pred -------HHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeC
Confidence 344444555555555555554444445555555555555555544
No 94
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=1.7e-21 Score=190.01 Aligned_cols=205 Identities=25% Similarity=0.440 Sum_probs=123.2
Q ss_pred eCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCCcCC
Q 009771 107 DLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLS 186 (526)
Q Consensus 107 ~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~ 186 (526)
.+..+.+++.+ ....+++|++|++++|.+.. +| .+..+++|++|++++|.+.+..+ +.++++|++|++++|.++
T Consensus 25 ~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~ 98 (308)
T 1h6u_A 25 AAGKSNVTDTV--TQADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLK 98 (308)
T ss_dssp HTTCSSTTSEE--CHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCS
T ss_pred HhCCCCcCcee--cHHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCC
Confidence 34444444432 23457788888888888774 44 57788888888888888875433 778888888888888876
Q ss_pred ccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCeeecccccCCC
Q 009771 187 GVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGG 266 (526)
Q Consensus 187 ~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~ 266 (526)
+. + .+..+++|++|++++|++++. + .+..+++|++|++++|.+++..+ +..+++|+.|++++|.+++
T Consensus 99 ~~-~--------~~~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~ 165 (308)
T 1h6u_A 99 NV-S--------AIAGLQSIKTLDLTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSD 165 (308)
T ss_dssp CC-G--------GGTTCTTCCEEECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC
T ss_pred Cc-h--------hhcCCCCCCEEECCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCC
Confidence 52 1 356777788888888777653 3 26677777777777777665432 5566666666666665554
Q ss_pred CCCccccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcC
Q 009771 267 PIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQL 336 (526)
Q Consensus 267 ~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l 336 (526)
..+ +..+++|+.|++++|.+++..+ +..+++|++|++++|++++..+ +..+++|+.|++++|.+
T Consensus 166 ~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i 229 (308)
T 1h6u_A 166 LTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTI 229 (308)
T ss_dssp CGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEE
T ss_pred Chh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCee
Confidence 222 4455555555555555543222 4444444444444444443221 33444444444444444
No 95
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.87 E-value=6.1e-22 Score=185.96 Aligned_cols=198 Identities=15% Similarity=0.201 Sum_probs=168.4
Q ss_pred CCCCEEEccCccCCccCCcccCCCCCCCEEEccCCC-CCCCCccccCCCCCCCEEEccC-CcCCccCCcccccCcccccC
Q 009771 125 SNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNN-LNGTIPIEIGSVRNLETLSLDG-NKLSGVLPIYFGTIPIEIES 202 (526)
Q Consensus 125 ~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~-l~~~~p~~l~~l~~L~~L~L~~-n~l~~~~p~~~~~ip~~l~~ 202 (526)
++|++|++++|++++..+..|+++++|++|++++|. +++..+..+.++++|++|++++ |.+++..+.. +.+
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~-------f~~ 103 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDA-------LKE 103 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTS-------EEC
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHH-------hCC
Confidence 489999999999998777789999999999999997 8765566899999999999998 9998655443 468
Q ss_pred CCCCCEEEccCCcCCCcCchhhcCcCccC---ccccccc-ccCCCCchhhhcCcCCC-eeecccccCCCCCCccccCCCc
Q 009771 203 LRNLQWLDLSSNKLSGTIPKEIGSLRNLK---ELDLSSN-KLGGVLPQEIENLKSLT-ALSMDANNLGGPIPSTLFRLTN 277 (526)
Q Consensus 203 l~~L~~L~l~~n~l~~~~p~~l~~l~~L~---~L~l~~n-~l~~~~p~~l~~l~~L~-~L~l~~n~l~~~~p~~l~~~~~ 277 (526)
+++|++|++++|++++ +|. ++.+++|+ +|++++| .+++..+..+..+++|+ .|++++|.++ .+|......++
T Consensus 104 l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~ 180 (239)
T 2xwt_C 104 LPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTK 180 (239)
T ss_dssp CTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCE
T ss_pred CCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCC
Confidence 8999999999999986 665 88888888 9999999 89877777799999999 9999999998 56665555589
Q ss_pred cceeeccccc-CCCCCchhhhCC-CCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCc
Q 009771 278 IEYLSLGFNR-FNGSIPREIVNL-KNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQ 335 (526)
Q Consensus 278 L~~L~L~~n~-l~g~~p~~l~~~-~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~ 335 (526)
|+.|++++|+ +++..+..+..+ ++|+.|++++|++++ +|.. .+++|+.|+++++.
T Consensus 181 L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~--~~~~L~~L~l~~~~ 237 (239)
T 2xwt_C 181 LDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK--GLEHLKELIARNTW 237 (239)
T ss_dssp EEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCT--TCTTCSEEECTTC-
T ss_pred CCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcccc-CChh--HhccCceeeccCcc
Confidence 9999999995 886666778899 999999999999985 4443 57789999998763
No 96
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.85 E-value=1.2e-21 Score=205.35 Aligned_cols=182 Identities=28% Similarity=0.443 Sum_probs=87.2
Q ss_pred CCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEcc
Q 009771 102 NLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLD 181 (526)
Q Consensus 102 ~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~ 181 (526)
+|+.|++++|++++ +|..+. ++|++|+|++|.++ .+| ..+++|++|+|++|.+++ +|. +.+ +|++|+++
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 34455555555554 444332 45556666555555 344 234555555555555554 444 433 55555555
Q ss_pred CCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCeeeccc
Q 009771 182 GNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDA 261 (526)
Q Consensus 182 ~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~ 261 (526)
+|.+++ +| . .+++|+.|++++|++++ +|. .+++|++|++++|.+++ +|. +. ++|+.|++++
T Consensus 129 ~N~l~~-lp-------~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~ 189 (571)
T 3cvr_A 129 NNQLTM-LP-------E---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVST 189 (571)
T ss_dssp SSCCSC-CC-------C---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCS
T ss_pred CCcCCC-CC-------C---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcC
Confidence 555554 22 1 24455555555555553 333 34455555555555554 333 32 4555555555
Q ss_pred ccCCCCCCccccCCCcc-------ceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCC
Q 009771 262 NNLGGPIPSTLFRLTNI-------EYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPS 318 (526)
Q Consensus 262 n~l~~~~p~~l~~~~~L-------~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~ 318 (526)
|.++ .+|. +.. +| +.|++++|.++ .+|..+..+++|+.|++++|.+++.+|.
T Consensus 190 N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~ 248 (571)
T 3cvr_A 190 NLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRE 248 (571)
T ss_dssp SCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHH
T ss_pred CCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHH
Confidence 5544 3333 222 33 44444444444 2444444444444444444444444433
No 97
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.85 E-value=1.6e-20 Score=172.36 Aligned_cols=181 Identities=25% Similarity=0.284 Sum_probs=134.6
Q ss_pred CEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCC
Q 009771 104 QYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGN 183 (526)
Q Consensus 104 ~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n 183 (526)
+.++.+++.++ .+|..+ .++|++|++++|.+++..+..|+++++|++|++++|.+++..+..+.++++|++|++++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 45677777665 345444 468899999999988766667888899999999999888665566788888999999988
Q ss_pred cCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCeeeccccc
Q 009771 184 KLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANN 263 (526)
Q Consensus 184 ~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~ 263 (526)
.+++..+.. +.++++|++|++++|++++..+..+.++++|++|++++|.+++..+..+..+++|+.|++++|.
T Consensus 87 ~l~~~~~~~-------~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 159 (208)
T 2o6s_A 87 QLQSLPNGV-------FDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNP 159 (208)
T ss_dssp CCCCCCTTT-------TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCC
T ss_pred cCCccCHhH-------hcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCC
Confidence 887544432 3577888888888888887666667788888888888888887666667777888888888776
Q ss_pred CCCCCCccccCCCccceeecccccCCCCCchhhhCCCC
Q 009771 264 LGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKN 301 (526)
Q Consensus 264 l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~ 301 (526)
+.+ .+++|+.|+++.|.++|.+|..++.++.
T Consensus 160 ~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 160 WDC-------TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp BCC-------CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred eec-------CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 653 3456777777777777777766665443
No 98
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.83 E-value=5.6e-20 Score=192.58 Aligned_cols=134 Identities=29% Similarity=0.425 Sum_probs=84.2
Q ss_pred CCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCcccccCCCC
Q 009771 126 NLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRN 205 (526)
Q Consensus 126 ~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~ 205 (526)
+|++|++++|.+++ +|..+. ++|++|+|++|.++ .+| ..+++|++|++++|.+++ +|. + .+ +
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l-------~~--~ 121 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-L-------PA--S 121 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-C-------CT--T
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-h-------hc--C
Confidence 78888888888875 666553 67888888888877 566 446777778887777775 443 2 22 6
Q ss_pred CCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCeeecccccCCCCCCccccCCCccceeeccc
Q 009771 206 LQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGF 285 (526)
Q Consensus 206 L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~ 285 (526)
|++|++++|++++ +|. .+++|+.|++++|.+++ +|. .+++|+.|++++|.+++ +|. +. ++|+.|++++
T Consensus 122 L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~ 189 (571)
T 3cvr_A 122 LKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVST 189 (571)
T ss_dssp CCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCS
T ss_pred CCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcC
Confidence 7777777777765 444 45666666666666664 333 34555555555555554 443 33 4555555555
Q ss_pred ccCC
Q 009771 286 NRFN 289 (526)
Q Consensus 286 n~l~ 289 (526)
|.++
T Consensus 190 N~L~ 193 (571)
T 3cvr_A 190 NLLE 193 (571)
T ss_dssp SCCS
T ss_pred CCCC
Confidence 5554
No 99
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.83 E-value=4.5e-20 Score=183.45 Aligned_cols=124 Identities=17% Similarity=0.169 Sum_probs=73.7
Q ss_pred CEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCcc-ccCCCCCCCE-EEcc
Q 009771 104 QYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPI-EIGSVRNLET-LSLD 181 (526)
Q Consensus 104 ~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~-~l~~l~~L~~-L~L~ 181 (526)
+.++.++++++ .+|..+ .+++++|+|++|+++...+..|.++++|++|+|++|.+.+.+|. .|.+++++++ +.++
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 45666666666 456555 25677777777777744444577777777777777776655553 3566666554 4445
Q ss_pred CCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccc
Q 009771 182 GNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSS 237 (526)
Q Consensus 182 ~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~ 237 (526)
+|+++...|.. +..+++|++|++++|++.+..+..+....++..+++.+
T Consensus 89 ~N~l~~l~~~~-------f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~ 137 (350)
T 4ay9_X 89 ANNLLYINPEA-------FQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQD 137 (350)
T ss_dssp ETTCCEECTTS-------BCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEES
T ss_pred CCcccccCchh-------hhhccccccccccccccccCCchhhcccchhhhhhhcc
Confidence 56666544433 24566666666666666654444444444455555543
No 100
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.82 E-value=1.2e-19 Score=180.32 Aligned_cols=202 Identities=17% Similarity=0.146 Sum_probs=126.3
Q ss_pred CcccceeeCCCCCEEEEEcCCCceecccCCCCcCCCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCc-
Q 009771 65 CGWVGITCDYEGRITDIGLQKSNIKGELGRLNFSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPK- 143 (526)
Q Consensus 65 C~w~gv~C~~~~~v~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~- 143 (526)
|.|..|.|+. .+++++ |..+ .+++++|+|++|+++...+.+|.++++|++|+|++|.+.+.+|.
T Consensus 9 C~~~~v~C~~-~~Lt~i------------P~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~ 73 (350)
T 4ay9_X 9 CSNRVFLCQE-SKVTEI------------PSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEAD 73 (350)
T ss_dssp EETTEEEEES-TTCCSC------------CTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTT
T ss_pred eeCCEEEecC-CCCCcc------------CcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChh
Confidence 5677788863 233321 2223 36899999999999855456789999999999999998776664
Q ss_pred ccCCCCCCCE-EEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCcccccCCCCCCEEEccC-CcCCCcCc
Q 009771 144 EIGSLRNLEV-LDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSS-NKLSGTIP 221 (526)
Q Consensus 144 ~l~~l~~L~~-L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~-n~l~~~~p 221 (526)
.|.++++|++ +.+++|+++...|..|.++++|++|++++|.+++..+..+ ....++..+++.+ +++....+
T Consensus 74 ~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~-------~~~~~l~~l~l~~~~~i~~l~~ 146 (350)
T 4ay9_X 74 VFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHK-------IHSLQKVLLDIQDNINIHTIER 146 (350)
T ss_dssp SBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTT-------CCBSSCEEEEEESCTTCCEECT
T ss_pred HhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhh-------cccchhhhhhhccccccccccc
Confidence 5788888775 6667788887777888999999999999999886544332 3455677888865 44543333
Q ss_pred hhhcCcC-ccCcccccccccCCCCchhhhcCcCCCeeecccccCCCCCCc-cccCCCccceeecccccCC
Q 009771 222 KEIGSLR-NLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPS-TLFRLTNIEYLSLGFNRFN 289 (526)
Q Consensus 222 ~~l~~l~-~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~-~l~~~~~L~~L~L~~n~l~ 289 (526)
..|..+. .++.|++++|+++.. |.......+|+.+++.+++..+.+|. .+..+++|++|++++|+++
T Consensus 147 ~~f~~~~~~l~~L~L~~N~i~~i-~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~ 215 (350)
T 4ay9_X 147 NSFVGLSFESVILWLNKNGIQEI-HNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH 215 (350)
T ss_dssp TSSTTSBSSCEEEECCSSCCCEE-CTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCC
T ss_pred cchhhcchhhhhhccccccccCC-ChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcC
Confidence 3444442 455566666665532 22222334445555543222223332 2344444444444444444
No 101
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.82 E-value=8.3e-20 Score=170.09 Aligned_cols=161 Identities=29% Similarity=0.330 Sum_probs=125.2
Q ss_pred CCCCCcccceeeCCCCCEEEEEcCCCceecccCCCCcCCCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCcc
Q 009771 61 TSDHCGWVGITCDYEGRITDIGLQKSNIKGELGRLNFSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGT 140 (526)
Q Consensus 61 ~~~~C~w~gv~C~~~~~v~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ 140 (526)
+.+.|+|.+|.|+.. +++.+ +..+ .++|++|++++|.+++..|..+..+++|++|+|++|.+.+.
T Consensus 15 ~~~~Cs~~~v~c~~~-~l~~i------------p~~~--~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i 79 (229)
T 3e6j_A 15 SQCSCSGTTVDCRSK-RHASV------------PAGI--PTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGAL 79 (229)
T ss_dssp TTCEEETTEEECTTS-CCSSC------------CSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred CCCEEeCCEeEccCC-CcCcc------------CCCC--CCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCc
Confidence 568899999999742 22211 2222 37899999999999888888888999999999999998765
Q ss_pred CCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcC
Q 009771 141 IPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTI 220 (526)
Q Consensus 141 ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~ 220 (526)
.+..|..+++|++|+|++|.+++..+..+..+++|++|++++|.++ .+|..+..+++|++|++++|++++..
T Consensus 80 ~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~--------~lp~~~~~l~~L~~L~L~~N~l~~~~ 151 (229)
T 3e6j_A 80 PVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT--------ELPRGIERLTHLTHLALDQNQLKSIP 151 (229)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC--------SCCTTGGGCTTCSEEECCSSCCCCCC
T ss_pred ChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc--------ccCcccccCCCCCEEECCCCcCCccC
Confidence 5566788999999999999988766666788888999999888877 23445567788888888888888666
Q ss_pred chhhcCcCccCcccccccccCCCC
Q 009771 221 PKEIGSLRNLKELDLSSNKLGGVL 244 (526)
Q Consensus 221 p~~l~~l~~L~~L~l~~n~l~~~~ 244 (526)
+..+..+++|+.|++++|.+....
T Consensus 152 ~~~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 152 HGAFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp TTTTTTCTTCCEEECTTSCBCTTB
T ss_pred HHHHhCCCCCCEEEeeCCCccCCc
Confidence 666777888888888888777554
No 102
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.80 E-value=3.7e-19 Score=188.37 Aligned_cols=171 Identities=27% Similarity=0.406 Sum_probs=79.0
Q ss_pred CCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCcccccC
Q 009771 123 SLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIES 202 (526)
Q Consensus 123 ~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~ 202 (526)
.+++|++|++++|.+.. +| .+..+++|++|+|++|.+.+..| +..+++|++|+|++|.+++. | .+..
T Consensus 41 ~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l-~--------~l~~ 107 (605)
T 1m9s_A 41 ELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKDL-S--------SLKD 107 (605)
T ss_dssp HHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCC-T--------TSTT
T ss_pred cCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCCC-h--------hhcc
Confidence 34444444444444432 22 24444444444444444443222 44444444444444444321 1 2334
Q ss_pred CCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCeeecccccCCCCCCccccCCCccceee
Q 009771 203 LRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLS 282 (526)
Q Consensus 203 l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~ 282 (526)
+++|+.|++++|++.+. +.+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|.+.+..| +..+++|+.|+
T Consensus 108 l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~ 181 (605)
T 1m9s_A 108 LKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLY 181 (605)
T ss_dssp CTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred CCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEE
Confidence 44444555544444431 2344445555555555544433 334455555555555555544333 44555555555
Q ss_pred cccccCCCCCchhhhCCCCCcEEEeeCccCcC
Q 009771 283 LGFNRFNGSIPREIVNLKNLTSLSLGGNKLTG 314 (526)
Q Consensus 283 L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~ 314 (526)
|++|.+++. | .+..+++|+.|+|++|.+.+
T Consensus 182 Ls~N~i~~l-~-~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 182 LSKNHISDL-R-ALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp CCSSCCCBC-G-GGTTCTTCSEEECCSEEEEC
T ss_pred CcCCCCCCC-h-HHccCCCCCEEEccCCcCcC
Confidence 555555432 2 35555555555555555544
No 103
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.79 E-value=7.6e-19 Score=169.77 Aligned_cols=171 Identities=27% Similarity=0.417 Sum_probs=93.0
Q ss_pred CCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCcccccC
Q 009771 123 SLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIES 202 (526)
Q Consensus 123 ~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~ 202 (526)
.+++|++|++++|.+.. ++ .+..+++|++|++++|.+++..+ +.++++|++|++++|.+++. | .+..
T Consensus 44 ~l~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~--------~-~l~~ 110 (291)
T 1h6t_A 44 ELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDL--------S-SLKD 110 (291)
T ss_dssp HHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCG--------G-GGTT
T ss_pred hcCcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCCC--------h-hhcc
Confidence 34555555555555542 22 24555555555555555553322 55555555555555555431 1 2345
Q ss_pred CCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCeeecccccCCCCCCccccCCCccceee
Q 009771 203 LRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLS 282 (526)
Q Consensus 203 l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~ 282 (526)
+++|++|++++|++++. +.+..+++|+.|++++|.+++. ..+..+++|+.|++++|.+++..+ +..+++|+.|+
T Consensus 111 l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~ 184 (291)
T 1h6t_A 111 LKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLY 184 (291)
T ss_dssp CTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred CCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEE
Confidence 55555666655555532 2355555566666666655543 345556666666666666554433 55566666666
Q ss_pred cccccCCCCCchhhhCCCCCcEEEeeCccCcC
Q 009771 283 LGFNRFNGSIPREIVNLKNLTSLSLGGNKLTG 314 (526)
Q Consensus 283 L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~ 314 (526)
+++|.+++ ++ .+..+++|+.|++++|.+..
T Consensus 185 L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 185 LSKNHISD-LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CCSSCCCB-CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred CCCCcCCC-Ch-hhccCCCCCEEECcCCcccC
Confidence 66666654 33 35666666666666666654
No 104
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.79 E-value=9e-19 Score=169.24 Aligned_cols=173 Identities=24% Similarity=0.394 Sum_probs=145.2
Q ss_pred cCCCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCC
Q 009771 97 FSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLE 176 (526)
Q Consensus 97 ~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~ 176 (526)
+..+++|+.|++++|.+... + .+..+++|++|++++|.+++..+ +.++++|++|++++|.+++ +| .+..+++|+
T Consensus 42 ~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~ 115 (291)
T 1h6t_A 42 QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLK 115 (291)
T ss_dssp HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCC
T ss_pred hhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCC
Confidence 45678899999999988754 3 58889999999999999986543 8899999999999999875 33 488999999
Q ss_pred EEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCe
Q 009771 177 TLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTA 256 (526)
Q Consensus 177 ~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~ 256 (526)
+|++++|.+++. + .+..+++|++|++++|++++. ..++.+++|++|++++|.+++..+ +..+++|+.
T Consensus 116 ~L~L~~n~i~~~-~--------~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~ 182 (291)
T 1h6t_A 116 SLSLEHNGISDI-N--------GLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQN 182 (291)
T ss_dssp EEECTTSCCCCC-G--------GGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCE
T ss_pred EEECCCCcCCCC-h--------hhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCE
Confidence 999999998863 1 456888999999999999865 578899999999999999987654 889999999
Q ss_pred eecccccCCCCCCccccCCCccceeecccccCCC
Q 009771 257 LSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNG 290 (526)
Q Consensus 257 L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g 290 (526)
|++++|.+++. + .+..+++|+.|++++|.++.
T Consensus 183 L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 183 LYLSKNHISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp EECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred EECCCCcCCCC-h-hhccCCCCCEEECcCCcccC
Confidence 99999998763 3 48889999999999998875
No 105
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.78 E-value=6.5e-19 Score=186.51 Aligned_cols=174 Identities=24% Similarity=0.400 Sum_probs=130.8
Q ss_pred cCCCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCC
Q 009771 97 FSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLE 176 (526)
Q Consensus 97 ~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~ 176 (526)
+..+++|+.|++++|.+.. ++ .+..+++|++|+|++|.+.+..| +..+++|++|+|++|.+.+ +| .+..+++|+
T Consensus 39 ~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~ 112 (605)
T 1m9s_A 39 QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLK 112 (605)
T ss_dssp HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCC
T ss_pred hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCC
Confidence 4456778888888887764 33 57778888888888888876443 7788888888888888864 33 677888888
Q ss_pred EEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCe
Q 009771 177 TLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTA 256 (526)
Q Consensus 177 ~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~ 256 (526)
+|+|++|.+++. + .+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|.+.+..| +..+++|+.
T Consensus 113 ~L~Ls~N~l~~l-~--------~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~ 179 (605)
T 1m9s_A 113 SLSLEHNGISDI-N--------GLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQN 179 (605)
T ss_dssp EEECTTSCCCCC-G--------GGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCE
T ss_pred EEEecCCCCCCC-c--------cccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCE
Confidence 888888887752 1 356778888888888888764 567788888888888888877655 778888888
Q ss_pred eecccccCCCCCCccccCCCccceeecccccCCCC
Q 009771 257 LSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGS 291 (526)
Q Consensus 257 L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~ 291 (526)
|+|++|.+++. ..+..+++|+.|+|++|.+++.
T Consensus 180 L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 180 LYLSKNHISDL--RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp EECCSSCCCBC--GGGTTCTTCSEEECCSEEEECC
T ss_pred EECcCCCCCCC--hHHccCCCCCEEEccCCcCcCC
Confidence 88888887753 3577788888888888887653
No 106
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.77 E-value=3e-18 Score=158.44 Aligned_cols=134 Identities=23% Similarity=0.291 Sum_probs=92.4
Q ss_pred CCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEc
Q 009771 101 PNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSL 180 (526)
Q Consensus 101 ~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 180 (526)
++|+.|++++|++++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|.++...+..+.++++|++|++
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 111 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLL 111 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEEC
Confidence 57777777777777665667777777777777777777766777777777777777777777444444667777777777
Q ss_pred cCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccC
Q 009771 181 DGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLG 241 (526)
Q Consensus 181 ~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~ 241 (526)
++|.+++..|.. +..+++|++|++++|++++..+..|..+++|+.|++++|.+.
T Consensus 112 ~~N~l~~~~~~~-------~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 112 NANKINCLRVDA-------FQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CSSCCCCCCTTT-------TTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCCCCEeCHHH-------cCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 777776655443 345666777777777776655555666666666666666554
No 107
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.77 E-value=1.8e-18 Score=159.89 Aligned_cols=151 Identities=26% Similarity=0.375 Sum_probs=130.1
Q ss_pred EeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCCcC
Q 009771 106 LDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKL 185 (526)
Q Consensus 106 L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l 185 (526)
+++++++++ .+|..+. ++|++|++++|.+++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|.+
T Consensus 16 v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l 92 (220)
T 2v9t_B 16 VDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKI 92 (220)
T ss_dssp EECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCC
T ss_pred EEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcC
Confidence 344444444 3555553 6899999999999987777899999999999999999988899999999999999999999
Q ss_pred CccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCeeecccccCC
Q 009771 186 SGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLG 265 (526)
Q Consensus 186 ~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~ 265 (526)
+...+.. +..+++|++|++++|++++..|..|..+++|++|++++|.+++..+..+..+++|+.|++++|.+.
T Consensus 93 ~~l~~~~-------f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 93 TELPKSL-------FEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CCCCTTT-------TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CccCHhH-------ccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 8544432 367899999999999999988999999999999999999999888888999999999999999886
Q ss_pred C
Q 009771 266 G 266 (526)
Q Consensus 266 ~ 266 (526)
.
T Consensus 166 c 166 (220)
T 2v9t_B 166 C 166 (220)
T ss_dssp C
T ss_pred C
Confidence 4
No 108
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.77 E-value=2.6e-18 Score=158.88 Aligned_cols=135 Identities=21% Similarity=0.251 Sum_probs=85.7
Q ss_pred CCCEEeCCCCCCCCCCc-hhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEc
Q 009771 102 NLQYLDLGSNNLSGSIP-SQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSL 180 (526)
Q Consensus 102 ~L~~L~l~~n~~~~~~p-~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 180 (526)
.+++|++++|++++..+ ..|..+++|++|+|++|.+++..+..|.++++|++|+|++|.+++..+..+.++++|++|++
T Consensus 33 ~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 112 (220)
T 2v70_A 33 YTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLML 112 (220)
T ss_dssp TCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEEC
T ss_pred CCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEEC
Confidence 45677777777665533 34566677777777777766655556666677777777777766655555666666666666
Q ss_pred cCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCC
Q 009771 181 DGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGV 243 (526)
Q Consensus 181 ~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~ 243 (526)
++|.+++..|..| ..+++|++|++++|++++..|..|..+++|+.|++++|.+...
T Consensus 113 s~N~l~~~~~~~~-------~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 113 RSNRITCVGNDSF-------IGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp TTSCCCCBCTTSS-------TTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred CCCcCCeECHhHc-------CCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 6666665544433 4556666666666666665566666666666666666665543
No 109
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.77 E-value=1.2e-20 Score=198.62 Aligned_cols=204 Identities=22% Similarity=0.226 Sum_probs=153.5
Q ss_pred cCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccc-------------cCCCCchhhhcCcCCCeee-cccccCCC
Q 009771 201 ESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNK-------------LGGVLPQEIENLKSLTALS-MDANNLGG 266 (526)
Q Consensus 201 ~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~-------------l~~~~p~~l~~l~~L~~L~-l~~n~l~~ 266 (526)
..++.|+.|++++|+++ .+|..++++++|+.|++++|. ..+.+|..++++++|+.|+ ++.|.+
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~-- 422 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL-- 422 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH--
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc--
Confidence 45677778888888776 677788888888888876654 4455666677777777776 454432
Q ss_pred CCCccccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCCCCCcccccC
Q 009771 267 PIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSIPLVIGN 346 (526)
Q Consensus 267 ~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~ 346 (526)
..|+.+.+++|.+++ +|. ..|+.|++++|.+++ +|. ++.+++|+.|++++|.++ .+|..++.
T Consensus 423 ---------~~L~~l~l~~n~i~~-l~~-----~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 484 (567)
T 1dce_A 423 ---------DDLRSKFLLENSVLK-MEY-----ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAA 484 (567)
T ss_dssp ---------HHHHHHHHHHHHHHH-HHH-----TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGG
T ss_pred ---------chhhhhhhhcccccc-cCc-----cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhc
Confidence 345555666665543 221 358889999998886 565 888889999999999888 77888888
Q ss_pred CCCCCeecCcCCcCcccCcccccCCCCCCEEecCCCcCcccc-hHHhhcCcCCCEEEccCCcCccccccc---ccCCCCC
Q 009771 347 FSALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLLSGQI-PFAIGKLFNLASLDLSKNKLSGSIPTE---IGNCSEL 422 (526)
Q Consensus 347 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~-~~~~~~~~~L~~L~l~~n~l~~~~~~~---~~~l~~L 422 (526)
+++|+.|+|++|++++ +| .++.+++|+.|+|++|++++.. |..++.+++|++|++++|.+++..|.. +..+++|
T Consensus 485 l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L 562 (567)
T 1dce_A 485 LRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSV 562 (567)
T ss_dssp CTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTC
T ss_pred CCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCccc
Confidence 9999999999999886 56 7888899999999999998776 888899999999999999988765432 3347788
Q ss_pred CeEEc
Q 009771 423 RNLTL 427 (526)
Q Consensus 423 ~~l~l 427 (526)
+.|++
T Consensus 563 ~~L~l 567 (567)
T 1dce_A 563 SSILT 567 (567)
T ss_dssp SEEEC
T ss_pred CccCC
Confidence 88764
No 110
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.77 E-value=1.4e-19 Score=196.28 Aligned_cols=231 Identities=20% Similarity=0.188 Sum_probs=118.5
Q ss_pred CCCCcccceeeCCCCCEEEEEcCCCceecccCCCCcCCCCCCCEEe-----CCCCCCCCCCchhccCCCCCCEEEccCcc
Q 009771 62 SDHCGWVGITCDYEGRITDIGLQKSNIKGELGRLNFSCFPNLQYLD-----LGSNNLSGSIPSQIDSLSNLTYIYLYENN 136 (526)
Q Consensus 62 ~~~C~w~gv~C~~~~~v~~l~l~~~~~~~~~~~~~~~~l~~L~~L~-----l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~ 136 (526)
...+.|.+..++. .+++.++|........ +..+.....|+.+. ++.|.+. ..+..+..+++|+.|+|++|.
T Consensus 160 ~~~~~~~~~~~s~-~~~~~l~L~~n~~~~~--~~~~l~~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~ 235 (727)
T 4b8c_D 160 TPSGTATNSAVST-PLTPKIELFANGKDEA--NQALLQHKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQ 235 (727)
T ss_dssp ------------------------------------------------------------------CCCCCCEEECTTSC
T ss_pred CccccCCCceecC-CccceEEeeCCCCCcc--hhhHhhcCccCcccccCcccccccee-cChhhhccCCCCcEEECCCCC
Confidence 3456798888864 6788888864332210 12222222222222 2233333 346778889999999999999
Q ss_pred CCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcC
Q 009771 137 LTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKL 216 (526)
Q Consensus 137 ~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l 216 (526)
+. .+|..+.++++|++|+|++|.++ .+|..++++++|++|+|++|.++ .+| ..++++++|++|+|++|.+
T Consensus 236 l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp-------~~~~~l~~L~~L~L~~N~l 305 (727)
T 4b8c_D 236 IF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLP-------AELGSCFQLKYFYFFDNMV 305 (727)
T ss_dssp CS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCC-------SSGGGGTTCSEEECCSSCC
T ss_pred CC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccC-------hhhcCCCCCCEEECCCCCC
Confidence 88 67877888999999999999998 88888999999999999999988 344 4557888999999999988
Q ss_pred CCcCchhhcCcCccCcccccccccCCCCchhhhcCcC-CCeeecccccCCCCCCccccCCCccceeecccc--------c
Q 009771 217 SGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKS-LTALSMDANNLGGPIPSTLFRLTNIEYLSLGFN--------R 287 (526)
Q Consensus 217 ~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~-L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n--------~ 287 (526)
+ .+|..|+++++|+.|+|++|.+++.+|..+..+.. +..+++++|.+++.+|.. |+.|+++.| .
T Consensus 306 ~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n~~~~~~~~~ 378 (727)
T 4b8c_D 306 T-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTDGEPQREYDS 378 (727)
T ss_dssp C-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC------------------------
T ss_pred C-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeecccccccccCC
Confidence 7 77888999999999999999999888887765432 234778899998888765 444555555 2
Q ss_pred CCCCCchhhhCCCCCcEEEeeCccCc
Q 009771 288 FNGSIPREIVNLKNLTSLSLGGNKLT 313 (526)
Q Consensus 288 l~g~~p~~l~~~~~L~~L~l~~n~l~ 313 (526)
+.+..+..+..+..+....++.|.+.
T Consensus 379 l~~~~~~~~~~l~~~~~~~ls~Nil~ 404 (727)
T 4b8c_D 379 LQQSTEHLATDLAKRTFTVLSYNTLC 404 (727)
T ss_dssp -----------------------CCC
T ss_pred ccccccchhhcccccceeeeeccccc
Confidence 33333334455566666677777665
No 111
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.76 E-value=9.9e-18 Score=155.96 Aligned_cols=151 Identities=30% Similarity=0.376 Sum_probs=107.9
Q ss_pred EEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCCc
Q 009771 105 YLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNK 184 (526)
Q Consensus 105 ~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~ 184 (526)
.++.++++++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|.+.+..+..+.++++|++|++++|.
T Consensus 23 ~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~ 99 (229)
T 3e6j_A 23 TVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQ 99 (229)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCc
Confidence 5666666665 4565543 788888888888888778888888888888888888865555557788888888888888
Q ss_pred CCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCeeecccccC
Q 009771 185 LSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNL 264 (526)
Q Consensus 185 l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l 264 (526)
+++..+.. +..+++|++|++++|+++ .+|..+..+++|++|++++|++++..+..+..+++|+.|++++|.+
T Consensus 100 l~~l~~~~-------~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 171 (229)
T 3e6j_A 100 LTVLPSAV-------FDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPW 171 (229)
T ss_dssp CCCCCTTT-------TTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCB
T ss_pred CCccChhH-------hCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCc
Confidence 77554432 356777778888777776 5666667777777777777777655555566666666666666655
Q ss_pred CC
Q 009771 265 GG 266 (526)
Q Consensus 265 ~~ 266 (526)
..
T Consensus 172 ~c 173 (229)
T 3e6j_A 172 DC 173 (229)
T ss_dssp CT
T ss_pred cC
Confidence 53
No 112
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.76 E-value=3.3e-18 Score=170.70 Aligned_cols=158 Identities=32% Similarity=0.306 Sum_probs=102.9
Q ss_pred CCCCEEeCCCCCCCCCCchhcc-CCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEE
Q 009771 101 PNLQYLDLGSNNLSGSIPSQID-SLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLS 179 (526)
Q Consensus 101 ~~L~~L~l~~n~~~~~~p~~l~-~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ 179 (526)
+.++.|+|++|++++..+..+. ++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+..|.++++|++|+
T Consensus 39 ~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 118 (361)
T 2xot_A 39 SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLL 118 (361)
T ss_dssp TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEE
Confidence 3577777777777766555565 777777777777777766666677777777777777777755555677777777777
Q ss_pred ccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhh---cCcCccCcccccccccCCCCchhhhcCcC--C
Q 009771 180 LDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEI---GSLRNLKELDLSSNKLGGVLPQEIENLKS--L 254 (526)
Q Consensus 180 L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l---~~l~~L~~L~l~~n~l~~~~p~~l~~l~~--L 254 (526)
|++|.+++..|.. +..+++|++|++++|++++..+..| ..+++|+.|+|++|.+++..+..+..++. +
T Consensus 119 L~~N~i~~~~~~~-------~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l 191 (361)
T 2xot_A 119 LYNNHIVVVDRNA-------FEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVK 191 (361)
T ss_dssp CCSSCCCEECTTT-------TTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHH
T ss_pred CCCCcccEECHHH-------hCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhc
Confidence 7777776654443 3466677777777777765333333 45666666666666666555455555554 2
Q ss_pred CeeecccccCC
Q 009771 255 TALSMDANNLG 265 (526)
Q Consensus 255 ~~L~l~~n~l~ 265 (526)
+.|++++|.+.
T Consensus 192 ~~l~l~~N~~~ 202 (361)
T 2xot_A 192 NGLYLHNNPLE 202 (361)
T ss_dssp TTEECCSSCEE
T ss_pred ceEEecCCCcc
Confidence 55555555543
No 113
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.75 E-value=4.1e-18 Score=154.74 Aligned_cols=153 Identities=17% Similarity=0.231 Sum_probs=72.7
Q ss_pred CCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEE
Q 009771 99 CFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETL 178 (526)
Q Consensus 99 ~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 178 (526)
.+++|++|++++|.++ .+| .+..+++|++|++++|.++ .++.+..+++|++|++++|.+++..|..++.+++|++|
T Consensus 42 ~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L 117 (197)
T 4ezg_A 42 QMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLL 117 (197)
T ss_dssp HHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEE
T ss_pred hcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEE
Confidence 3445555555555554 333 3555555555555555433 12344555555555555555554444445555555555
Q ss_pred EccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCeee
Q 009771 179 SLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALS 258 (526)
Q Consensus 179 ~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~ 258 (526)
++++|.++ +..|..++.+++|++|++++|.+.+.+| .+..+++|+.|+
T Consensus 118 ~Ls~n~i~-------------------------------~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~ 165 (197)
T 4ezg_A 118 DISHSAHD-------------------------------DSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLN 165 (197)
T ss_dssp ECCSSBCB-------------------------------GGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEE
T ss_pred EecCCccC-------------------------------cHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEE
Confidence 55555544 4444444444444444444444222233 344455555555
Q ss_pred cccccCCCCCCccccCCCccceeecccccCC
Q 009771 259 MDANNLGGPIPSTLFRLTNIEYLSLGFNRFN 289 (526)
Q Consensus 259 l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~ 289 (526)
+++|.+++ ++ .+..+++|+.|++++|++.
T Consensus 166 l~~n~i~~-~~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 166 IQFDGVHD-YR-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp CTTBCCCC-CT-TGGGCSSCCEEEECBC---
T ss_pred CCCCCCcC-hH-HhccCCCCCEEEeeCcccC
Confidence 55555443 12 3444555555555555543
No 114
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.75 E-value=6.5e-18 Score=168.54 Aligned_cols=177 Identities=25% Similarity=0.247 Sum_probs=147.9
Q ss_pred EEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccC-CCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCC
Q 009771 105 YLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIG-SLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGN 183 (526)
Q Consensus 105 ~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~-~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n 183 (526)
.+++++++++ .+|..+. ..+++|+|++|.+++..+..+. ++++|++|+|++|.+++..+..|.++++|++|+|++|
T Consensus 22 ~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 22 ILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp EEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 5667777776 3666554 4689999999999988777787 9999999999999999877788999999999999999
Q ss_pred cCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhh---hcCcCCCeeecc
Q 009771 184 KLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEI---ENLKSLTALSMD 260 (526)
Q Consensus 184 ~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l---~~l~~L~~L~l~ 260 (526)
++++..+.. +..+++|++|++++|++++..|..|..+++|++|+|++|.+++..+..+ ..+++|+.|+|+
T Consensus 99 ~l~~~~~~~-------~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~ 171 (361)
T 2xot_A 99 HLHTLDEFL-------FSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLS 171 (361)
T ss_dssp CCCEECTTT-------TTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECC
T ss_pred cCCcCCHHH-------hCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECC
Confidence 998765543 4688999999999999998888999999999999999999997655555 679999999999
Q ss_pred cccCCCCCCccccCCCc--cceeecccccCCCC
Q 009771 261 ANNLGGPIPSTLFRLTN--IEYLSLGFNRFNGS 291 (526)
Q Consensus 261 ~n~l~~~~p~~l~~~~~--L~~L~L~~n~l~g~ 291 (526)
+|.+++..+..+..++. ++.|++++|.+...
T Consensus 172 ~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~ 204 (361)
T 2xot_A 172 SNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECD 204 (361)
T ss_dssp SSCCCCCCHHHHHHSCHHHHTTEECCSSCEECC
T ss_pred CCCCCccCHHHhhhccHhhcceEEecCCCccCC
Confidence 99998765566777776 48899999988743
No 115
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.75 E-value=1.1e-17 Score=154.67 Aligned_cols=132 Identities=24% Similarity=0.290 Sum_probs=61.5
Q ss_pred cceeecccccCCCCCc-hhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCCCCCcccccCCCCCCeecCc
Q 009771 278 IEYLSLGFNRFNGSIP-REIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLS 356 (526)
Q Consensus 278 L~~L~L~~n~l~g~~p-~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 356 (526)
++.|++++|.+++..+ ..+..+++|++|++++|++++..+..|.++++|++|++++|.+++..+..+..+++|++|+++
T Consensus 34 ~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 113 (220)
T 2v70_A 34 TAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLR 113 (220)
T ss_dssp CSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECT
T ss_pred CCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECC
Confidence 3445555555444322 224444555555555555544444444445555555555555544444444444444444444
Q ss_pred CCcCcccCcccccCCCCCCEEecCCCcCcccchHHhhcCcCCCEEEccCCcCc
Q 009771 357 DNRICGIIPDELTKLSHLKYLNLSSNLLSGQIPFAIGKLFNLASLDLSKNKLS 409 (526)
Q Consensus 357 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~ 409 (526)
+|++++..|..+..+++|++|+|++|++++..|..+..+++|++|++++|.+.
T Consensus 114 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 166 (220)
T 2v70_A 114 SNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFN 166 (220)
T ss_dssp TSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEE
T ss_pred CCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCc
Confidence 44444444444444444444444444444443444444444444444444443
No 116
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.75 E-value=1.1e-20 Score=198.82 Aligned_cols=166 Identities=22% Similarity=0.233 Sum_probs=109.1
Q ss_pred CCCcCchhhcCcCccCccc-ccccccCCCCchhhhcCcCCCeeecccccCCCCCCccccCCCccceeecccccCCCCCch
Q 009771 216 LSGTIPKEIGSLRNLKELD-LSSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPR 294 (526)
Q Consensus 216 l~~~~p~~l~~l~~L~~L~-l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~ 294 (526)
..+..|..++++++|+.|+ ++.|.+ .+|..+.+.+|.++...+ ..|+.|++++|.+++ +|.
T Consensus 397 ~~~~~~~~l~~l~~L~~L~~l~~n~~-----------~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~ 458 (567)
T 1dce_A 397 PLLYEKETLQYFSTLKAVDPMRAAYL-----------DDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH 458 (567)
T ss_dssp TGGGHHHHHHHHHHHHHHCGGGHHHH-----------HHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC
T ss_pred cccCCHHHHHHHHhcccCcchhhccc-----------chhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC
Confidence 4567778888888888888 665543 234444455554432111 136667777777665 454
Q ss_pred hhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCCCCCcccccCCCCCCeecCcCCcCcccC-cccccCCCC
Q 009771 295 EIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICGII-PDELTKLSH 373 (526)
Q Consensus 295 ~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~-~~~~~~l~~ 373 (526)
+..+++|+.|++++|.++ .+|..++.+++|+.|+|++|.+++ +| .++.+++|++|+|++|++++.. |..+..+++
T Consensus 459 -~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~ 534 (567)
T 1dce_A 459 -LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPR 534 (567)
T ss_dssp -GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTT
T ss_pred -ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCC
Confidence 666777777777777776 566677777777777777777765 55 6677777777777777777665 777777777
Q ss_pred CCEEecCCCcCcccch---HHhhcCcCCCEEEc
Q 009771 374 LKYLNLSSNLLSGQIP---FAIGKLFNLASLDL 403 (526)
Q Consensus 374 L~~L~L~~n~l~~~~~---~~~~~~~~L~~L~l 403 (526)
|+.|+|++|.+++..| ..+..+++|+.|++
T Consensus 535 L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 535 LVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp CCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred CCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 7777777777765543 23445677777753
No 117
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.75 E-value=1e-17 Score=152.12 Aligned_cols=155 Identities=18% Similarity=0.289 Sum_probs=122.3
Q ss_pred CCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhc
Q 009771 146 GSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIG 225 (526)
Q Consensus 146 ~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~ 225 (526)
+.+++|++|++++|.+. .+| .+..+++|++|++++|.++.. ..+..+++|++|++++|++++..+..++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~~---------~~l~~l~~L~~L~l~~n~l~~~~~~~l~ 109 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATNY---------NPISGLSNLERLRIMGKDVTSDKIPNLS 109 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSCC---------GGGTTCTTCCEEEEECTTCBGGGSCCCT
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCcc---------hhhhcCCCCCEEEeECCccCcccChhhc
Confidence 45566777777777665 444 566677777777777754321 2456788888888888888877788889
Q ss_pred CcCccCcccccccccCCCCchhhhcCcCCCeeecccccCCCCCCccccCCCccceeecccccCCCCCchhhhCCCCCcEE
Q 009771 226 SLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSL 305 (526)
Q Consensus 226 ~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L 305 (526)
.+++|++|++++|.+++..|..++.+++|++|++++|.+.+.+| .+..+++|+.|++++|.+++ ++ .+..+++|++|
T Consensus 110 ~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L 186 (197)
T 4ezg_A 110 GLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQL 186 (197)
T ss_dssp TCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEE
T ss_pred CCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEE
Confidence 99999999999999998888999999999999999998444565 68899999999999999986 44 78899999999
Q ss_pred EeeCccCcC
Q 009771 306 SLGGNKLTG 314 (526)
Q Consensus 306 ~l~~n~l~~ 314 (526)
++++|++.+
T Consensus 187 ~l~~N~i~~ 195 (197)
T 4ezg_A 187 YAFSQTIGG 195 (197)
T ss_dssp EECBC----
T ss_pred EeeCcccCC
Confidence 999999864
No 118
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.73 E-value=7.9e-19 Score=190.43 Aligned_cols=218 Identities=26% Similarity=0.257 Sum_probs=120.6
Q ss_pred CCCCEEeCCCCCCCCCCchhccCCCCCCEEE-----ccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCC
Q 009771 101 PNLQYLDLGSNNLSGSIPSQIDSLSNLTYIY-----LYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNL 175 (526)
Q Consensus 101 ~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~-----Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L 175 (526)
+.++.|+|.+|.+.. ++..+....+|+.+. ++.|.+. ..|..+..+++|++|+|++|.+. .+|..+.++++|
T Consensus 173 ~~~~~l~L~~n~~~~-~~~~~l~~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L 249 (727)
T 4b8c_D 173 PLTPKIELFANGKDE-ANQALLQHKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFL 249 (727)
T ss_dssp ---------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSC
T ss_pred CccceEEeeCCCCCc-chhhHhhcCccCcccccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCC
Confidence 567888998888765 343333333333332 2333333 45777889999999999999997 788888899999
Q ss_pred CEEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCC
Q 009771 176 ETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLT 255 (526)
Q Consensus 176 ~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~ 255 (526)
++|+|++|.++ .+ |..++++++|++|+|++|.++ .+|..|+++++|++|+|++|.++ .+|..|+.+++|+
T Consensus 250 ~~L~Ls~N~l~-~l-------p~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~ 319 (727)
T 4b8c_D 250 TRLYLNGNSLT-EL-------PAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQ 319 (727)
T ss_dssp SCCBCTTSCCS-CC-------CGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCC
T ss_pred CEEEeeCCcCc-cc-------ChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCcc
Confidence 99999999988 44 445678899999999999998 78999999999999999999987 6788899999999
Q ss_pred eeecccccCCCCCCccccCCCc-cceeecccccCCCCCchhhhCCCCCcEEEeeCc--------cCcCCCCCCCCCCCcc
Q 009771 256 ALSMDANNLGGPIPSTLFRLTN-IEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGN--------KLTGHIPSTLGRLTSL 326 (526)
Q Consensus 256 ~L~l~~n~l~~~~p~~l~~~~~-L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n--------~l~~~~p~~l~~l~~L 326 (526)
.|+|++|.+++.+|..+..... +..+++++|.++|.+|. .|+.|+++.| .+.+..+..+..+..+
T Consensus 320 ~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~------~l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~ 393 (727)
T 4b8c_D 320 FLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH------ERRFIEINTDGEPQREYDSLQQSTEHLATDLAKR 393 (727)
T ss_dssp CEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC------C---------------------------------
T ss_pred EEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc------ccceeEeecccccccccCCccccccchhhccccc
Confidence 9999999999888877765422 23478999999988875 4455666665 2333333444555666
Q ss_pred cEEECCCCcCC
Q 009771 327 QILDLSSNQLH 337 (526)
Q Consensus 327 ~~L~Ls~n~l~ 337 (526)
....++.|.+.
T Consensus 394 ~~~~ls~Nil~ 404 (727)
T 4b8c_D 394 TFTVLSYNTLC 404 (727)
T ss_dssp --------CCC
T ss_pred ceeeeeccccc
Confidence 66677777664
No 119
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.71 E-value=8.1e-18 Score=159.97 Aligned_cols=168 Identities=24% Similarity=0.351 Sum_probs=95.4
Q ss_pred CCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEE
Q 009771 100 FPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLS 179 (526)
Q Consensus 100 l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ 179 (526)
+.++..++++.+.+++. + .+..+++|++|++++|.++ .+| .+..+++|++|+|++|.+++..+ +.++++|++|+
T Consensus 18 l~~l~~l~l~~~~i~~~-~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~ 91 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTDL-V-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHTCSCTTSE-E-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEE
T ss_pred HHHHHHHHhcCCCcccc-c-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEE
Confidence 34455566666666533 2 4566777777777777766 344 56677777777777777764433 66777777777
Q ss_pred ccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCeeec
Q 009771 180 LDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSM 259 (526)
Q Consensus 180 L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l 259 (526)
+++|.+++. |. +.. ++|++|++++|++++. +.+..+++|+.|++++|++++. + .+..+++|+.|++
T Consensus 92 L~~N~l~~l-~~--------~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L 157 (263)
T 1xeu_A 92 VNRNRLKNL-NG--------IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDL 157 (263)
T ss_dssp CCSSCCSCC-TT--------CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEEC
T ss_pred CCCCccCCc-Cc--------ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEEC
Confidence 777776642 21 112 5666666666666542 2355566666666666655543 2 3445555555555
Q ss_pred ccccCCCCCCccccCCCccceeecccccCC
Q 009771 260 DANNLGGPIPSTLFRLTNIEYLSLGFNRFN 289 (526)
Q Consensus 260 ~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~ 289 (526)
++|.+++. ..+..+++|+.|++++|.++
T Consensus 158 ~~N~i~~~--~~l~~l~~L~~L~l~~N~~~ 185 (263)
T 1xeu_A 158 HGNEITNT--GGLTRLKKVNWIDLTGQKCV 185 (263)
T ss_dssp TTSCCCBC--TTSTTCCCCCEEEEEEEEEE
T ss_pred CCCcCcch--HHhccCCCCCEEeCCCCccc
Confidence 55554433 23333444444444444433
No 120
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.71 E-value=2.3e-17 Score=156.77 Aligned_cols=171 Identities=22% Similarity=0.327 Sum_probs=125.6
Q ss_pred CcCccCcccccccccCCCCchhhhcCcCCCeeecccccCCCCCCccccCCCccceeecccccCCCCCchhhhCCCCCcEE
Q 009771 226 SLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSL 305 (526)
Q Consensus 226 ~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L 305 (526)
.+.++..+++++|.+++. + .+..+++|+.|++++|.++. ++ .+..+++|+.|++++|.+++..+ +..+++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~~-~-~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDL-V-SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSE-E-CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCcccc-c-chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 455666777777777643 2 46777788888888887763 44 56777888888888888876433 7788888888
Q ss_pred EeeCccCcCCCCCCCCCCCcccEEECCCCcCCCCCcccccCCCCCCeecCcCCcCcccCcccccCCCCCCEEecCCCcCc
Q 009771 306 SLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLLS 385 (526)
Q Consensus 306 ~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 385 (526)
++++|++++ +|.. .. ++|++|++++|.+++. + .+..+++|++|++++|++++. + .+..+++|++|++++|+++
T Consensus 91 ~L~~N~l~~-l~~~-~~-~~L~~L~L~~N~l~~~-~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 91 SVNRNRLKN-LNGI-PS-ACLSRLFLDNNELRDT-D-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp ECCSSCCSC-CTTC-CC-SSCCEEECCSSCCSBS-G-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCC
T ss_pred ECCCCccCC-cCcc-cc-CcccEEEccCCccCCC-h-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCc
Confidence 888888875 3332 22 7888888888888763 3 477788888888888888764 3 5777888888888888887
Q ss_pred ccchHHhhcCcCCCEEEccCCcCccc
Q 009771 386 GQIPFAIGKLFNLASLDLSKNKLSGS 411 (526)
Q Consensus 386 ~~~~~~~~~~~~L~~L~l~~n~l~~~ 411 (526)
+. ..+..+++|++|++++|.+.+.
T Consensus 164 ~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 164 NT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp BC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred ch--HHhccCCCCCEEeCCCCcccCC
Confidence 65 5677788888888888887765
No 121
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.68 E-value=1.7e-16 Score=140.11 Aligned_cols=134 Identities=23% Similarity=0.276 Sum_probs=81.3
Q ss_pred CCCCCEEeCCCCCCC-CCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEE
Q 009771 100 FPNLQYLDLGSNNLS-GSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETL 178 (526)
Q Consensus 100 l~~L~~L~l~~n~~~-~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 178 (526)
.++|+.|++++|.++ +.+|..+..+++|++|++++|.+++. ..++.+++|++|++++|.+++.+|..+.++++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 356777777777766 56666666677777777777776644 556666777777777777666566555556666666
Q ss_pred EccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCc---hhhcCcCccCcccccccccC
Q 009771 179 SLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIP---KEIGSLRNLKELDLSSNKLG 241 (526)
Q Consensus 179 ~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p---~~l~~l~~L~~L~l~~n~l~ 241 (526)
++++|.+++..+ +..+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+.
T Consensus 101 ~Ls~N~l~~~~~------~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 101 NLSGNKLKDIST------LEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp ECBSSSCCSSGG------GGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred eccCCccCcchh------HHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 666666654211 0234455666666666666654433 34555555555555555443
No 122
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.67 E-value=3.6e-16 Score=141.17 Aligned_cols=112 Identities=29% Similarity=0.362 Sum_probs=70.1
Q ss_pred CCCEEeCCCCCCCCCCch-hccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEc
Q 009771 102 NLQYLDLGSNNLSGSIPS-QIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSL 180 (526)
Q Consensus 102 ~L~~L~l~~n~~~~~~p~-~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 180 (526)
+|++|++++|.+++..+. .++.+++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+..+.++++|++|++
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 109 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEEC
Confidence 666667766666654443 3666666666666666666666666666666666666666666655555666666666666
Q ss_pred cCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcC
Q 009771 181 DGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTI 220 (526)
Q Consensus 181 ~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~ 220 (526)
++|++++..|..+ ..+++|++|++++|.+.+..
T Consensus 110 ~~N~l~~~~~~~~-------~~l~~L~~L~L~~N~l~c~c 142 (192)
T 1w8a_A 110 YDNQISCVMPGSF-------EHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp CSSCCCEECTTSS-------TTCTTCCEEECTTCCBCCSG
T ss_pred CCCcCCeeCHHHh-------hcCCCCCEEEeCCCCccCcC
Confidence 6666665544432 45556666666666665443
No 123
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.66 E-value=1.5e-16 Score=137.33 Aligned_cols=129 Identities=23% Similarity=0.320 Sum_probs=76.3
Q ss_pred CCCCCEEeCCCCCCC-CCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEE
Q 009771 100 FPNLQYLDLGSNNLS-GSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETL 178 (526)
Q Consensus 100 l~~L~~L~l~~n~~~-~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 178 (526)
.++|+.|++++|.++ +.+|..+..+++|++|++++|.+++. ..++++++|++|++++|.+++.+|..+.++++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 356677777777766 56666666667777777777766644 556666666666666666665566555556666666
Q ss_pred EccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCc---hhhcCcCccCccccc
Q 009771 179 SLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIP---KEIGSLRNLKELDLS 236 (526)
Q Consensus 179 ~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p---~~l~~l~~L~~L~l~ 236 (526)
++++|.+++.. .+..+..+++|++|++++|.+++..+ ..++.+++|+.|+++
T Consensus 94 ~ls~N~i~~~~------~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 94 NLSGNKIKDLS------TIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ECTTSCCCSHH------HHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ECCCCcCCChH------HHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 66666655421 01233455556666666665554433 344555555555543
No 124
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.64 E-value=7e-16 Score=136.09 Aligned_cols=134 Identities=26% Similarity=0.262 Sum_probs=102.7
Q ss_pred CCCCCCEEEccCccCC-ccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCccccc
Q 009771 123 SLSNLTYIYLYENNLT-GTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIE 201 (526)
Q Consensus 123 ~l~~L~~L~Ls~n~~~-~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~ 201 (526)
..++|++|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|++|++++|.+++.+|. .+.
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~-------~~~ 92 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDM-------LAE 92 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCH-------HHH
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHH-------HHh
Confidence 3478899999999887 77888888888999999999988765 6788888888888888888865443 334
Q ss_pred CCCCCCEEEccCCcCCCcC-chhhcCcCccCcccccccccCCCCc---hhhhcCcCCCeeecccccCC
Q 009771 202 SLRNLQWLDLSSNKLSGTI-PKEIGSLRNLKELDLSSNKLGGVLP---QEIENLKSLTALSMDANNLG 265 (526)
Q Consensus 202 ~l~~L~~L~l~~n~l~~~~-p~~l~~l~~L~~L~l~~n~l~~~~p---~~l~~l~~L~~L~l~~n~l~ 265 (526)
++++|++|++++|++++.. +..+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+.
T Consensus 93 ~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 93 KLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp HCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred hCCCCCEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 5778888888888887542 2667778888888888888776654 46777777777777777654
No 125
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.64 E-value=3.5e-16 Score=135.04 Aligned_cols=128 Identities=26% Similarity=0.304 Sum_probs=100.4
Q ss_pred CCCCCEEEccCccCC-ccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCcccccC
Q 009771 124 LSNLTYIYLYENNLT-GTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIES 202 (526)
Q Consensus 124 l~~L~~L~Ls~n~~~-~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~ 202 (526)
.++|++|++++|.++ +.+|..+..+++|++|++++|.+++. ..++++++|++|++++|.+++.+|. .+..
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~-------~~~~ 86 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEV-------LAEK 86 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHH-------HHHH
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHH-------Hhhh
Confidence 467889999999887 78888888889999999999988765 6788888888888888888865443 3356
Q ss_pred CCCCCEEEccCCcCCCc-CchhhcCcCccCcccccccccCCCCc---hhhhcCcCCCeeecc
Q 009771 203 LRNLQWLDLSSNKLSGT-IPKEIGSLRNLKELDLSSNKLGGVLP---QEIENLKSLTALSMD 260 (526)
Q Consensus 203 l~~L~~L~l~~n~l~~~-~p~~l~~l~~L~~L~l~~n~l~~~~p---~~l~~l~~L~~L~l~ 260 (526)
+++|++|++++|++++. .+..++.+++|++|++++|.+++..+ ..+..+++|+.|+++
T Consensus 87 l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 87 CPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 77888888888888763 34677888888888888888876655 467777888887765
No 126
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.63 E-value=9.2e-17 Score=158.08 Aligned_cols=102 Identities=17% Similarity=0.083 Sum_probs=63.1
Q ss_pred CCcccEEECCCCcCCCCCcccccCCCCCCeecCcCCcCcccCcccccCCCCCC-EEecCCCcCcccchHHhhcCcCCCEE
Q 009771 323 LTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICGIIPDELTKLSHLK-YLNLSSNLLSGQIPFAIGKLFNLASL 401 (526)
Q Consensus 323 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~-~L~L~~n~l~~~~~~~~~~~~~L~~L 401 (526)
+++|+.+++++|.++...+.+|.++.+|+++++.+| +....+..|..+++|+ .+++.+ .++..-+.+|.++++|+.+
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 455666666666665544555666666666666665 5544455566666666 666666 4544445566667777777
Q ss_pred EccCCcCcccccccccCCCCCCeEE
Q 009771 402 DLSKNKLSGSIPTEIGNCSELRNLT 426 (526)
Q Consensus 402 ~l~~n~l~~~~~~~~~~l~~L~~l~ 426 (526)
++++|.+....+..|.++++|+.++
T Consensus 303 ~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 303 LATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EECSSCCCEECTTTTCTTCCCCEEE
T ss_pred EeCCCccCccchhhhcCCcchhhhc
Confidence 7766666665556677777776664
No 127
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.63 E-value=2.8e-15 Score=133.44 Aligned_cols=136 Identities=25% Similarity=0.303 Sum_probs=96.2
Q ss_pred CCcccceeeCCCCCEEEEEcCCCceecccCCCCcCCCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCc
Q 009771 64 HCGWVGITCDYEGRITDIGLQKSNIKGELGRLNFSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPK 143 (526)
Q Consensus 64 ~C~w~gv~C~~~~~v~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~ 143 (526)
.|.|.++.|+.. +++.+ + ....++|++|++++|++++..+..++.+++|++|++++|.+++..+.
T Consensus 6 ~C~~~~l~~~~~-~l~~~------------p--~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 70 (177)
T 2o6r_A 6 SCSGTEIRCNSK-GLTSV------------P--TGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDG 70 (177)
T ss_dssp EEETTEEECCSS-CCSSC------------C--TTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTT
T ss_pred EeCCCEEEecCC-CCccC------------C--CCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChh
Confidence 367999999642 22211 1 12236888888888888866666678888888888888888866666
Q ss_pred ccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCc
Q 009771 144 EIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIP 221 (526)
Q Consensus 144 ~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p 221 (526)
.|+++++|++|++++|.+++..+..+.++++|++|++++|.+++..+.. +..+++|++|++++|.+.+..|
T Consensus 71 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-------~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 71 VFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGI-------FDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTT-------TTTCTTCCEEECCSSCBCCCHH
T ss_pred HccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHH-------hcCCcccCEEEecCCCeeccCc
Confidence 6788888888888888888666666777888888888888777543322 2456777777777777766544
No 128
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.63 E-value=2.7e-15 Score=135.37 Aligned_cols=130 Identities=26% Similarity=0.333 Sum_probs=72.1
Q ss_pred CeeecccccCCCCCCccccCCCccceeecccccCCCCCch-hhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCC
Q 009771 255 TALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPR-EIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSS 333 (526)
Q Consensus 255 ~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~-~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~ 333 (526)
+.+++++|.++ .+|..+.. ++++|++++|.+++..+. .+..+++|++|++++|++++..|..|.++++|++|++++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 44555555542 34433322 555556666555543332 255556666666666666655555555666666666666
Q ss_pred CcCCCCCcccccCCCCCCeecCcCCcCcccCcccccCCCCCCEEecCCCcCccc
Q 009771 334 NQLHSSIPLVIGNFSALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLLSGQ 387 (526)
Q Consensus 334 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 387 (526)
|++++..+..+..+++|++|++++|++++..|..+..+++|++|++++|.+++.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 666555555555556666666666666655555555555566666666555544
No 129
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.59 E-value=1.3e-14 Score=129.10 Aligned_cols=133 Identities=24% Similarity=0.247 Sum_probs=101.8
Q ss_pred CCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccC
Q 009771 103 LQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDG 182 (526)
Q Consensus 103 L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~ 182 (526)
.+.+++++++++ .+|..+ .++|++|++++|.+++..+..|+++++|++|++++|.+++..+..+.++++|++|++++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 357788888876 345444 36889999999998876666778889999999999988866666678888888888888
Q ss_pred CcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCc
Q 009771 183 NKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLP 245 (526)
Q Consensus 183 n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p 245 (526)
|.+++..+.. +..+++|++|++++|++++..+..+..+++|++|++++|.+.+..|
T Consensus 86 N~l~~~~~~~-------~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGV-------FDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTT-------TTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHH-------hhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 8888654432 3577788888888888886555556778888888888888776654
No 130
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.59 E-value=1.1e-14 Score=131.33 Aligned_cols=109 Identities=26% Similarity=0.348 Sum_probs=68.4
Q ss_pred CCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEc
Q 009771 101 PNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSL 180 (526)
Q Consensus 101 ~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 180 (526)
++|++|++++|.++ .+|..+.++++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|
T Consensus 31 ~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L 109 (193)
T 2wfh_A 31 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSL 109 (193)
T ss_dssp TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEEC
Confidence 46667777776665 45566666667777777777666655566666666666666666666555556666666666666
Q ss_pred cCCcCCccCCcccccCcccccCCCCCCEEEccCCcCC
Q 009771 181 DGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLS 217 (526)
Q Consensus 181 ~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~ 217 (526)
++|.+++..+.. +..+++|+.|++++|.+.
T Consensus 110 ~~N~l~~~~~~~-------~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 110 HGNDISVVPEGA-------FNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CSSCCCBCCTTT-------TTTCTTCCEEECCSSCEE
T ss_pred CCCCCCeeChhh-------hhcCccccEEEeCCCCee
Confidence 666666433322 245556666666666554
No 131
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.59 E-value=4.4e-16 Score=153.22 Aligned_cols=284 Identities=14% Similarity=0.132 Sum_probs=164.4
Q ss_pred CCCCCEEeCCCCCCCCCCchhccC-CCCCCEEEccCccCC--ccCCcccCCCCCCCEEEccCCCCCCCCccccCC-----
Q 009771 100 FPNLQYLDLGSNNLSGSIPSQIDS-LSNLTYIYLYENNLT--GTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGS----- 171 (526)
Q Consensus 100 l~~L~~L~l~~n~~~~~~p~~l~~-l~~L~~L~Ls~n~~~--~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~----- 171 (526)
+++++.|.++++ +.+.-...+.. +++|++|+|++|++. ...+. .++.++.+.+..|.+. +..|.+
T Consensus 24 ~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~---~~~~~~~~~~~~~~I~---~~aF~~~~~~~ 96 (329)
T 3sb4_A 24 ANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAG---TYPNGKFYIYMANFVP---AYAFSNVVNGV 96 (329)
T ss_dssp HHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSS---SSGGGCCEEECTTEEC---TTTTEEEETTE
T ss_pred hCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccc---cccccccccccccccC---HHHhccccccc
Confidence 456667776543 11111112222 667777777777766 21111 1222344444444221 123444
Q ss_pred ---CCCCCEEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccc----cCCCC
Q 009771 172 ---VRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNK----LGGVL 244 (526)
Q Consensus 172 ---l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~----l~~~~ 244 (526)
+++|+.+++.+ .++...+.. +.++++|+.+++++|.+....+.+|..+.++..+.+..+. ....-
T Consensus 97 ~~g~~~L~~l~L~~-~i~~I~~~a-------F~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~ 168 (329)
T 3sb4_A 97 TKGKQTLEKVILSE-KIKNIEDAA-------FKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWE 168 (329)
T ss_dssp EEECTTCCC-CBCT-TCCEECTTT-------TTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTT
T ss_pred ccccCCCcEEECCc-cccchhHHH-------hhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccc
Confidence 67777777766 555433332 3566677777777776665555556665555555544321 11111
Q ss_pred chhhhcCcCCC-eeecccccCCCCCCccc----cCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCC
Q 009771 245 PQEIENLKSLT-ALSMDANNLGGPIPSTL----FRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPST 319 (526)
Q Consensus 245 p~~l~~l~~L~-~L~l~~n~l~~~~p~~l----~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~ 319 (526)
...|.++..|+ .+.+... +.++..+ ....+++.+.+.++-...........+++|+.+++++|+++...+..
T Consensus 169 ~~~f~~~~~L~~~i~~~~~---~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~a 245 (329)
T 3sb4_A 169 HFAFIEGEPLETTIQVGAM---GKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFT 245 (329)
T ss_dssp TSCEEESCCCEEEEEECTT---CCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTT
T ss_pred ccccccccccceeEEecCC---CcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhh
Confidence 12233444444 2222211 1111111 12344555555543211111111123788999999988888666677
Q ss_pred CCCCCcccEEECCCCcCCCCCcccccCCCCCC-eecCcCCcCcccCcccccCCCCCCEEecCCCcCcccchHHhhcCcCC
Q 009771 320 LGRLTSLQILDLSSNQLHSSIPLVIGNFSALS-YLDLSDNRICGIIPDELTKLSHLKYLNLSSNLLSGQIPFAIGKLFNL 398 (526)
Q Consensus 320 l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~-~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L 398 (526)
|.++++|+.+++.+| ++...+.+|.++.+|+ .+++.+ .++...+..|..+++|+.+++++|.++...+.+|.++++|
T Consensus 246 F~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L 323 (329)
T 3sb4_A 246 FAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPS 323 (329)
T ss_dssp TTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCC
T ss_pred hhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcch
Confidence 888889999999887 7666677788888998 999888 6776667888889999999998888887667788889999
Q ss_pred CEEEc
Q 009771 399 ASLDL 403 (526)
Q Consensus 399 ~~L~l 403 (526)
+.++.
T Consensus 324 ~~ly~ 328 (329)
T 3sb4_A 324 KLIYK 328 (329)
T ss_dssp CEEEC
T ss_pred hhhcc
Confidence 88864
No 132
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.56 E-value=1.8e-14 Score=129.91 Aligned_cols=128 Identities=26% Similarity=0.402 Sum_probs=96.9
Q ss_pred CEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCC
Q 009771 104 QYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGN 183 (526)
Q Consensus 104 ~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n 183 (526)
+.+++++++++ .+|..+. ++|++|++++|.++ .+|..|.++++|++|+|++|.+++..+..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 57888888876 5665543 57888888888887 67778888888888888888888776777888888888888888
Q ss_pred cCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCC
Q 009771 184 KLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGG 242 (526)
Q Consensus 184 ~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~ 242 (526)
.+++..|.. +..+++|++|++++|++++..+..|..+++|+.|++++|.+..
T Consensus 89 ~l~~i~~~~-------f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 89 RLRCIPPRT-------FDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCCBCCTTT-------TTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred ccCEeCHHH-------hCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 887665543 3567788888888888776555567777777777777776653
No 133
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.54 E-value=1.3e-14 Score=128.89 Aligned_cols=135 Identities=20% Similarity=0.197 Sum_probs=81.2
Q ss_pred CCcCCCCCCCEEeCCCCCCCCCCchhccCCC-CCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCC
Q 009771 95 LNFSCFPNLQYLDLGSNNLSGSIPSQIDSLS-NLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVR 173 (526)
Q Consensus 95 ~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~-~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~ 173 (526)
..+..+++|+.|++++|.++. +|. +..+. +|++|++++|.+++. +.++.+++|++|++++|.+++..+..+..++
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 88 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALP 88 (176)
T ss_dssp CEEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCT
T ss_pred HhcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCC
Confidence 345566777777777777763 343 33333 777777777777654 4566777777777777777643333346667
Q ss_pred CCCEEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchh----hcCcCccCccccccccc
Q 009771 174 NLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKE----IGSLRNLKELDLSSNKL 240 (526)
Q Consensus 174 ~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~----l~~l~~L~~L~l~~n~l 240 (526)
+|++|++++|.++. +|. ...+..+++|++|++++|.++ .+|.. +..+++|+.|++++|..
T Consensus 89 ~L~~L~L~~N~i~~-~~~-----~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~ 152 (176)
T 1a9n_A 89 DLTELILTNNSLVE-LGD-----LDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKL 152 (176)
T ss_dssp TCCEEECCSCCCCC-GGG-----GGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCH
T ss_pred CCCEEECCCCcCCc-chh-----hHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCH
Confidence 77777777776642 121 013456666666666666665 33432 55556666666655543
No 134
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.50 E-value=3.2e-16 Score=142.33 Aligned_cols=87 Identities=23% Similarity=0.343 Sum_probs=39.0
Q ss_pred hcCcCccCcccccccccCCCCch------hhhcCcCCCeeecccccCCCCCCccccCCCccceeecccccCCCCCchhhh
Q 009771 224 IGSLRNLKELDLSSNKLGGVLPQ------EIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIV 297 (526)
Q Consensus 224 l~~l~~L~~L~l~~n~l~~~~p~------~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~ 297 (526)
+.....++.++++.+.++|.+|. .+..+++|++|++++|.+++ +| .+..+++|+.|++++|.++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 33444555555555555555443 44444444444444444443 33 3344444444444444443 2333333
Q ss_pred CCCCCcEEEeeCccCc
Q 009771 298 NLKNLTSLSLGGNKLT 313 (526)
Q Consensus 298 ~~~~L~~L~l~~n~l~ 313 (526)
.+++|++|++++|+++
T Consensus 91 ~~~~L~~L~L~~N~l~ 106 (198)
T 1ds9_A 91 VADTLEELWISYNQIA 106 (198)
T ss_dssp HHHHCSEEEEEEEECC
T ss_pred cCCcCCEEECcCCcCC
Confidence 3334444444444333
No 135
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.50 E-value=3.8e-16 Score=141.83 Aligned_cols=148 Identities=32% Similarity=0.360 Sum_probs=72.8
Q ss_pred cCcCCCeeecccccCCCCCCc------cccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCC
Q 009771 250 NLKSLTALSMDANNLGGPIPS------TLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRL 323 (526)
Q Consensus 250 ~l~~L~~L~l~~n~l~~~~p~------~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l 323 (526)
....++.+++..+.+.|.+|. .+..+++|++|++++|.+++ +| .+..+++|++|++++|.++ .+|..+..+
T Consensus 16 ~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~ 92 (198)
T 1ds9_A 16 ERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVA 92 (198)
T ss_dssp HTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHH
T ss_pred hcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcC
Confidence 344445555555555544443 44445555555555555544 33 4455555555555555554 344444444
Q ss_pred CcccEEECCCCcCCCCCcccccCCCCCCeecCcCCcCcccCc-ccccCCCCCCEEecCCCcCcccchH----------Hh
Q 009771 324 TSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICGIIP-DELTKLSHLKYLNLSSNLLSGQIPF----------AI 392 (526)
Q Consensus 324 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~----------~~ 392 (526)
++|++|++++|.+++ +| .+..+++|++|++++|++++..+ ..+..+++|++|++++|.+++.+|. .+
T Consensus 93 ~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~ 170 (198)
T 1ds9_A 93 DTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVV 170 (198)
T ss_dssp HHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHH
T ss_pred CcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHH
Confidence 555555555555543 22 34444555555555555543221 2344555555555555555443332 25
Q ss_pred hcCcCCCEEE
Q 009771 393 GKLFNLASLD 402 (526)
Q Consensus 393 ~~~~~L~~L~ 402 (526)
..+++|++||
T Consensus 171 ~~l~~L~~Ld 180 (198)
T 1ds9_A 171 KRLPNLKKLD 180 (198)
T ss_dssp HHCSSCSEEC
T ss_pred HhCCCcEEEC
Confidence 5566666655
No 136
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.49 E-value=5.6e-14 Score=124.82 Aligned_cols=132 Identities=19% Similarity=0.240 Sum_probs=89.5
Q ss_pred hccCCCCCCEEEccCccCCccCCcccCCC-CCCCEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCcc
Q 009771 120 QIDSLSNLTYIYLYENNLTGTIPKEIGSL-RNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPI 198 (526)
Q Consensus 120 ~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l-~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~ 198 (526)
.+.++++|++|++++|.++. +|. +..+ ++|++|++++|.+++. ..+..+++|++|++++|.+++..+..
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~------ 83 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGL------ 83 (176)
T ss_dssp EEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCH------
T ss_pred hcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcch------
Confidence 45667888888888888873 454 4444 4888888888888754 56777888888888888877543221
Q ss_pred cccCCCCCCEEEccCCcCCCcCch--hhcCcCccCcccccccccCCCCch----hhhcCcCCCeeecccccC
Q 009771 199 EIESLRNLQWLDLSSNKLSGTIPK--EIGSLRNLKELDLSSNKLGGVLPQ----EIENLKSLTALSMDANNL 264 (526)
Q Consensus 199 ~l~~l~~L~~L~l~~n~l~~~~p~--~l~~l~~L~~L~l~~n~l~~~~p~----~l~~l~~L~~L~l~~n~l 264 (526)
+..+++|++|++++|+++ .+|. .+..+++|+.|++++|.++. +|. .+..+++|+.|+++.|..
T Consensus 84 -~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~ 152 (176)
T 1a9n_A 84 -DQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKL 152 (176)
T ss_dssp -HHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCH
T ss_pred -hhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCH
Confidence 256677888888888775 3444 56677777777777777763 343 266666666666666543
No 137
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.49 E-value=1.4e-12 Score=131.08 Aligned_cols=264 Identities=11% Similarity=0.102 Sum_probs=137.2
Q ss_pred CCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEE
Q 009771 100 FPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLS 179 (526)
Q Consensus 100 l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ 179 (526)
+..++.+.+.++ ++..-..+|.++ +|+.+.+..+ ++..-...|.++ +|+.+.+.. .+...-+..|.++++|+.++
T Consensus 112 ~~~l~~i~ip~~-i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~ 186 (401)
T 4fdw_A 112 LKGYNEIILPNS-VKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKAD 186 (401)
T ss_dssp CSSCSEEECCTT-CCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEE
T ss_pred cCCccEEEECCc-cCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeee
Confidence 355555555442 322223445553 5666666554 443333445443 466666654 34333334556666666666
Q ss_pred ccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcCCCeeec
Q 009771 180 LDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSM 259 (526)
Q Consensus 180 L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l 259 (526)
+.+|.++......| ...+|+.+.+..+ +...-..+|.++++|+.+++..+ ++..-..
T Consensus 187 l~~n~l~~I~~~aF--------~~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~------------- 243 (401)
T 4fdw_A 187 LSKTKITKLPASTF--------VYAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQE------------- 243 (401)
T ss_dssp CTTSCCSEECTTTT--------TTCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTT-------------
T ss_pred cCCCcceEechhhE--------eecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccc-------------
Confidence 66655553322222 2345555555432 33233334445555555554432 2211112
Q ss_pred ccccCCCCCCccccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCc-----CCCCCCCCCCCcccEEECCCC
Q 009771 260 DANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLT-----GHIPSTLGRLTSLQILDLSSN 334 (526)
Q Consensus 260 ~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~-----~~~p~~l~~l~~L~~L~Ls~n 334 (526)
.|.+ .+|+.+.+. +.++..-...|.+|++|+.+++.+|.+. ...+..|.++++|+.+++.+
T Consensus 244 -----------aF~~-~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~- 309 (401)
T 4fdw_A 244 -----------AFRE-SGITTVKLP-NGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE- 309 (401)
T ss_dssp -----------TTTT-CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-
T ss_pred -----------cccc-CCccEEEeC-CCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-
Confidence 2222 455555553 3333333445666666666666665543 23344566667777777763
Q ss_pred cCCCCCcccccCCCCCCeecCcCCcCcccCcccccCCCCCCEEecCCCcCcccchHHhhcCc-CCCEEEccCCc
Q 009771 335 QLHSSIPLVIGNFSALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLLSGQIPFAIGKLF-NLASLDLSKNK 407 (526)
Q Consensus 335 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~-~L~~L~l~~n~ 407 (526)
.++.....+|.++.+|+.+.+..+ ++......|..+ +|+.+++.+|.+.......+.+++ .++.+++..+.
T Consensus 310 ~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~ 381 (401)
T 4fdw_A 310 SIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAES 381 (401)
T ss_dssp TCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGG
T ss_pred ceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHH
Confidence 355444556666777777777544 444445566666 777777777766544444555553 56777766554
No 138
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.46 E-value=2.4e-12 Score=129.50 Aligned_cols=225 Identities=11% Similarity=0.057 Sum_probs=144.1
Q ss_pred CCCcCCCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCC
Q 009771 94 RLNFSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVR 173 (526)
Q Consensus 94 ~~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~ 173 (526)
..+|.+. +|+.+.+..+ ++..-..+|.++ +|+.+.+.. .+...-+..|.+|++|+.+++.+|.++......|. ..
T Consensus 129 ~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~ 203 (401)
T 4fdw_A 129 KDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YA 203 (401)
T ss_dssp TTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TC
T ss_pred HhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ec
Confidence 5567774 7999999876 554445667774 799999986 66655567899999999999999998744334454 68
Q ss_pred CCCEEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcCcC
Q 009771 174 NLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENLKS 253 (526)
Q Consensus 174 ~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~ 253 (526)
+|+.+.+..+ ++..... .+.++++|+.+++..+ ++..-..+|.+ .+|+.+.+. +.++..-...|.++++
T Consensus 204 ~L~~l~lp~~-l~~I~~~-------aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~I~~~aF~~c~~ 272 (401)
T 4fdw_A 204 GIEEVLLPVT-LKEIGSQ-------AFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVTNIASRAFYYCPE 272 (401)
T ss_dssp CCSEEECCTT-CCEECTT-------TTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCCEECTTTTTTCTT
T ss_pred ccCEEEeCCc-hheehhh-------HhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCccEEChhHhhCCCC
Confidence 9999999854 5433333 3468899999999865 44344455666 788888884 4455444566778888
Q ss_pred CCeeecccccCC-----CCCCccccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccE
Q 009771 254 LTALSMDANNLG-----GPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQI 328 (526)
Q Consensus 254 L~~L~l~~n~l~-----~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~ 328 (526)
|+.+.+.+|.+. ..-+..|.++++|+.+.+.+ .++..-...|.+|++|+.+.+..+ ++..-...|.++ +|+.
T Consensus 273 L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~ 349 (401)
T 4fdw_A 273 LAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKE 349 (401)
T ss_dssp CCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCE
T ss_pred CCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCE
Confidence 888888776553 11223455556666666552 233333344555555555555433 332233344444 5555
Q ss_pred EECCCCcCC
Q 009771 329 LDLSSNQLH 337 (526)
Q Consensus 329 L~Ls~n~l~ 337 (526)
+++.+|...
T Consensus 350 l~l~~n~~~ 358 (401)
T 4fdw_A 350 VKVEGTTPP 358 (401)
T ss_dssp EEECCSSCC
T ss_pred EEEcCCCCc
Confidence 555554443
No 139
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.42 E-value=1.3e-12 Score=115.23 Aligned_cols=104 Identities=26% Similarity=0.373 Sum_probs=55.0
Q ss_pred EEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCCc
Q 009771 105 YLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNK 184 (526)
Q Consensus 105 ~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~ 184 (526)
.+++++|+++. +|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..|.++++|++|+|++|+
T Consensus 13 ~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~ 89 (170)
T 3g39_A 13 TVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQ 89 (170)
T ss_dssp EEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCc
Confidence 44455554442 343332 555566666666655555555556666666666666554444445555556666666555
Q ss_pred CCccCCcccccCcccccCCCCCCEEEccCCcCCC
Q 009771 185 LSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSG 218 (526)
Q Consensus 185 l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~ 218 (526)
+++..+.. +.++++|++|++++|.+..
T Consensus 90 l~~~~~~~-------~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 90 LKSIPRGA-------FDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp CCCCCTTT-------TTTCTTCCEEECCSSCBCT
T ss_pred cCEeCHHH-------hcCCCCCCEEEeCCCCCCC
Confidence 55433322 2345555556665555543
No 140
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.41 E-value=7.4e-13 Score=116.73 Aligned_cols=91 Identities=24% Similarity=0.212 Sum_probs=83.1
Q ss_pred CCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEE
Q 009771 100 FPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLS 179 (526)
Q Consensus 100 l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ 179 (526)
.++|++|+|++|++++..|..|..+++|++|+|++|++++..+..|.++++|++|+|++|++++..+..+.++++|++|+
T Consensus 29 ~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 108 (170)
T 3g39_A 29 PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIW 108 (170)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEE
Confidence 38999999999999998899999999999999999999987777789999999999999999977777799999999999
Q ss_pred ccCCcCCccCC
Q 009771 180 LDGNKLSGVLP 190 (526)
Q Consensus 180 L~~n~l~~~~p 190 (526)
+++|.++...+
T Consensus 109 L~~N~~~c~c~ 119 (170)
T 3g39_A 109 LLNNPWDCACS 119 (170)
T ss_dssp CCSSCBCTTBG
T ss_pred eCCCCCCCCch
Confidence 99999886543
No 141
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.40 E-value=1.5e-11 Score=123.79 Aligned_cols=314 Identities=14% Similarity=0.089 Sum_probs=205.4
Q ss_pred cCCCCcCCCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCC
Q 009771 92 LGRLNFSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGS 171 (526)
Q Consensus 92 ~~~~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~ 171 (526)
++..+|.++.+|+.+.+..+ ++..-..+|.+|++|+.+++..+ ++..-...|.++++|+.+.+..+ +.......|.+
T Consensus 62 Ig~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~ 138 (394)
T 4fs7_A 62 IGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKG 138 (394)
T ss_dssp ECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTT
T ss_pred hHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeec
Confidence 44778999999999999753 55444567889999999999765 54334456788888888776544 33223334555
Q ss_pred CCCCCEEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchhhhcC
Q 009771 172 VRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQEIENL 251 (526)
Q Consensus 172 l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l 251 (526)
+..++..........+ . ..+.++++|+.+.+..+. .......|.++.+|+.+.+..+ +.......+.++
T Consensus 139 ~~~~~~~~~~~~~~i~--~-------~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~ 207 (394)
T 4fs7_A 139 CDFKEITIPEGVTVIG--D-------EAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAEC 207 (394)
T ss_dssp CCCSEEECCTTCCEEC--T-------TTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTC
T ss_pred ccccccccCccccccc--h-------hhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccc
Confidence 5433332222221111 1 135678889999887543 3234456778888999988765 443344567788
Q ss_pred cCCCeeecccccCCCCCCccccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEEC
Q 009771 252 KSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDL 331 (526)
Q Consensus 252 ~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L 331 (526)
..|+.+.+..+... +........+|+.+.+... ++......+..+..++.+.+..+... .....|..+..++.+..
T Consensus 208 ~~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~ 283 (394)
T 4fs7_A 208 ILLENMEFPNSLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIY 283 (394)
T ss_dssp TTCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEE
T ss_pred cccceeecCCCceE--eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceecc
Confidence 88888887665422 2333445567888777543 22222345777888888888776543 33456677778888777
Q ss_pred CCCcCCCCCcccccCCCCCCeecCcCCcCcccCcccccCCCCCCEEecCCCcCcccchHHhhcCcCCCEEEccCCcCccc
Q 009771 332 SSNQLHSSIPLVIGNFSALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLLSGQIPFAIGKLFNLASLDLSKNKLSGS 411 (526)
Q Consensus 332 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~ 411 (526)
..+.+. ...+..+.+|+.+.+.++ +.......|..+.+|+.+++..+ ++..-..+|.+|.+|+.+++..+ +...
T Consensus 284 ~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I 357 (394)
T 4fs7_A 284 GSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKI 357 (394)
T ss_dssp CSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEE
T ss_pred Cceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEe
Confidence 665432 235667888888888765 45455566788888888888754 55444567888888999888766 5545
Q ss_pred ccccccCCCCCCeEEcCC
Q 009771 412 IPTEIGNCSELRNLTLNH 429 (526)
Q Consensus 412 ~~~~~~~l~~L~~l~l~~ 429 (526)
....|.+|.+|+.+++..
T Consensus 358 ~~~aF~~C~~L~~i~lp~ 375 (394)
T 4fs7_A 358 GANAFQGCINLKKVELPK 375 (394)
T ss_dssp CTTTBTTCTTCCEEEEEG
T ss_pred hHHHhhCCCCCCEEEECC
Confidence 556788888898888754
No 142
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.39 E-value=2.5e-12 Score=113.74 Aligned_cols=105 Identities=23% Similarity=0.310 Sum_probs=65.7
Q ss_pred CEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCC
Q 009771 104 QYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGN 183 (526)
Q Consensus 104 ~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n 183 (526)
+.+++++|+++ .+|..+. ++|++|+|++|.+++..|..|+++++|++|+|++|++++..+..+.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 35666666664 4555443 66777777777777666666777777777777777776544444566677777777777
Q ss_pred cCCccCCcccccCcccccCCCCCCEEEccCCcCCC
Q 009771 184 KLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSG 218 (526)
Q Consensus 184 ~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~ 218 (526)
++++..+.. +..+++|++|++++|.+..
T Consensus 92 ~l~~l~~~~-------~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 92 HLKSIPRGA-------FDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp CCCCCCTTT-------TTTCTTCSEEECCSSCBCT
T ss_pred ccceeCHHH-------hccccCCCEEEeCCCCccc
Confidence 666433321 3456666667666666653
No 143
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.36 E-value=3.9e-12 Score=112.49 Aligned_cols=107 Identities=23% Similarity=0.288 Sum_probs=84.8
Q ss_pred CCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCcccccCCCCC
Q 009771 127 LTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNL 206 (526)
Q Consensus 127 L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L 206 (526)
-+.+++++|.+. .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..+.. +.++++|
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~-------~~~l~~L 83 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGV-------FDKLTQL 83 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTT-------TTTCTTC
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhH-------hCCcchh
Confidence 368899999886 6777664 88999999999998887888888999999999999888644332 3577888
Q ss_pred CEEEccCCcCCCcCchhhcCcCccCcccccccccCCC
Q 009771 207 QWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGV 243 (526)
Q Consensus 207 ~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~ 243 (526)
++|++++|++++..+..|..+++|++|++++|.+...
T Consensus 84 ~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 84 TQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred hEEECCCCccceeCHHHhccccCCCEEEeCCCCcccc
Confidence 8888888888866555688888888888888877644
No 144
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.31 E-value=3.8e-12 Score=125.94 Aligned_cols=108 Identities=22% Similarity=0.296 Sum_probs=64.8
Q ss_pred CcccceeeCCCCCEEEEEcCCCceecccCCCCcCCCCCCCEEeCCC-CCCCCCCchhccCCCCCCEEEccCccCCccCCc
Q 009771 65 CGWVGITCDYEGRITDIGLQKSNIKGELGRLNFSCFPNLQYLDLGS-NNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPK 143 (526)
Q Consensus 65 C~w~gv~C~~~~~v~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~-n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~ 143 (526)
|.|..|.|...++++. + +. +..+++|+.|+|++ |.+++..+..|+++++|++|+|++|++++..|.
T Consensus 8 C~~~~v~~~~~n~l~~-----------i-p~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 74 (347)
T 2ifg_A 8 HGSSGLRCTRDGALDS-----------L-HH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPD 74 (347)
T ss_dssp SSSSCEECCSSCCCTT-----------T-TT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTT
T ss_pred ccCCEEEcCCCCCCCc-----------c-CC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHH
Confidence 7787888864212221 1 33 66666666677764 666655556666666666666666666666666
Q ss_pred ccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCCcCC
Q 009771 144 EIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLS 186 (526)
Q Consensus 144 ~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~ 186 (526)
.|.++++|++|+|++|++++..+..+..++ |++|+|.+|.+.
T Consensus 75 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 75 AFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp GGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred HhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 666666666666666666643333343333 666666666554
No 145
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.29 E-value=2.4e-10 Score=115.01 Aligned_cols=323 Identities=14% Similarity=0.089 Sum_probs=216.9
Q ss_pred CCEEEEEcCCCceecccCCCCcCCCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEE
Q 009771 76 GRITDIGLQKSNIKGELGRLNFSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLD 155 (526)
Q Consensus 76 ~~v~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~ 155 (526)
..++++.++..- ..++..+|.++++|+.+++.++ ++..-..+|.++.+|+.+.+..+ +...-...|.++..++...
T Consensus 71 ~~L~~i~lp~~i--~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~~~~~~~ 146 (394)
T 4fs7_A 71 RKVTEIKIPSTV--REIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCDFKEITI 146 (394)
T ss_dssp TTEEEEECCTTC--CEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCCCSEEEC
T ss_pred CCceEEEeCCCc--cCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeeccccccccc
Confidence 358888886321 1234778999999999999765 44333467888999998887654 4333445566665444433
Q ss_pred ccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccc
Q 009771 156 LGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDL 235 (526)
Q Consensus 156 L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l 235 (526)
..... ......|.++++|+.+.+..+. ...... .+.++.+|+.+.+..+ +.......|.++..|+.+.+
T Consensus 147 ~~~~~--~i~~~aF~~c~~L~~i~l~~~~-~~I~~~-------~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~ 215 (394)
T 4fs7_A 147 PEGVT--VIGDEAFATCESLEYVSLPDSM-ETLHNG-------LFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEF 215 (394)
T ss_dssp CTTCC--EECTTTTTTCTTCCEEECCTTC-CEECTT-------TTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCC
T ss_pred Ccccc--ccchhhhcccCCCcEEecCCcc-ceeccc-------cccCCCCceEEEcCCC-ceEeCchhhccccccceeec
Confidence 33222 1233568889999999987653 211111 3467888999888765 44344556788888998888
Q ss_pred cccccCCCCchhhhcCcCCCeeecccccCCCCCCccccCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCC
Q 009771 236 SSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGH 315 (526)
Q Consensus 236 ~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~ 315 (526)
..+... +........+|+.+.+.... .......+..+..++.+.+..+... .....+..+..++.+....+.+.
T Consensus 216 ~~~~~~--i~~~~~~~~~l~~i~ip~~~-~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~-- 289 (394)
T 4fs7_A 216 PNSLYY--LGDFALSKTGVKNIIIPDSF-TELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP-- 289 (394)
T ss_dssp CTTCCE--ECTTTTTTCCCCEEEECTTC-CEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC--
T ss_pred CCCceE--eehhhcccCCCceEEECCCc-eecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec--
Confidence 765432 22333445678888776432 2222345667888999988766432 33456788889998888765543
Q ss_pred CCCCCCCCCcccEEECCCCcCCCCCcccccCCCCCCeecCcCCcCcccCcccccCCCCCCEEecCCCcCcccchHHhhcC
Q 009771 316 IPSTLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLLSGQIPFAIGKL 395 (526)
Q Consensus 316 ~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~ 395 (526)
...+..+.+|+.+.+.++ ++.....+|.++.+|+.+++..+ ++......|..+.+|+.+++..+ ++..-..+|.+|
T Consensus 290 -~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C 365 (394)
T 4fs7_A 290 -EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGC 365 (394)
T ss_dssp -TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTC
T ss_pred -cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCC
Confidence 245778889999998765 55455567888999999999754 66555677889999999999876 554456789999
Q ss_pred cCCCEEEccCCcCcccccccccCCCCCCeE
Q 009771 396 FNLASLDLSKNKLSGSIPTEIGNCSELRNL 425 (526)
Q Consensus 396 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l 425 (526)
.+|+.+++..+-- .+...|.++.+|+.+
T Consensus 366 ~~L~~i~lp~~~~--~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 366 INLKKVELPKRLE--QYRYDFEDTTKFKWI 393 (394)
T ss_dssp TTCCEEEEEGGGG--GGGGGBCTTCEEEEE
T ss_pred CCCCEEEECCCCE--EhhheecCCCCCcEE
Confidence 9999999876521 234567777777654
No 146
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.28 E-value=8.9e-14 Score=138.54 Aligned_cols=166 Identities=17% Similarity=0.118 Sum_probs=95.1
Q ss_pred cCCCeeecccccCCCCCCcccc-----CCCccceeecccccCCCCCchhh-hCCCCCcEEEeeCccCcCCCCCCC-----
Q 009771 252 KSLTALSMDANNLGGPIPSTLF-----RLTNIEYLSLGFNRFNGSIPREI-VNLKNLTSLSLGGNKLTGHIPSTL----- 320 (526)
Q Consensus 252 ~~L~~L~l~~n~l~~~~p~~l~-----~~~~L~~L~L~~n~l~g~~p~~l-~~~~~L~~L~l~~n~l~~~~p~~l----- 320 (526)
+.|+.|++++|.++......+. ..++|++|+|++|.++......+ ..+++|+.|+|++|.+++.....+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 4566666666665532222221 12567777777776654322222 234566777777776654322222
Q ss_pred CCCCcccEEECCCCcCCC----CCcccccCCCCCCeecCcCCcCcccC----cccccCCCCCCEEecCCCcCccc----c
Q 009771 321 GRLTSLQILDLSSNQLHS----SIPLVIGNFSALSYLDLSDNRICGII----PDELTKLSHLKYLNLSSNLLSGQ----I 388 (526)
Q Consensus 321 ~~l~~L~~L~Ls~n~l~~----~~~~~~~~l~~L~~L~L~~n~l~~~~----~~~~~~l~~L~~L~L~~n~l~~~----~ 388 (526)
...++|++|+|++|.++. .++..+..+++|++|+|++|.+++.. +..+...++|++|+|++|.+++. +
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l 231 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL 231 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH
Confidence 234567777777777653 23334456677777777777776532 34455566777777777777643 3
Q ss_pred hHHhhcCcCCCEEEccCCcCccccccccc
Q 009771 389 PFAIGKLFNLASLDLSKNKLSGSIPTEIG 417 (526)
Q Consensus 389 ~~~~~~~~~L~~L~l~~n~l~~~~~~~~~ 417 (526)
...+...++|++|++++|.+++.....+.
T Consensus 232 ~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~ 260 (372)
T 3un9_A 232 ARAAREHPSLELLHLYFNELSSEGRQVLR 260 (372)
T ss_dssp HHHHHHCSSCCEEECTTSSCCHHHHHHHH
T ss_pred HHHHHhCCCCCEEeccCCCCCHHHHHHHH
Confidence 34445567777777777777665444443
No 147
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.25 E-value=5.8e-13 Score=132.68 Aligned_cols=163 Identities=18% Similarity=0.171 Sum_probs=124.7
Q ss_pred CCccceeecccccCCCCCchhhhC-----CCCCcEEEeeCccCcCCCCCCC-CCCCcccEEECCCCcCCCCCcccc----
Q 009771 275 LTNIEYLSLGFNRFNGSIPREIVN-----LKNLTSLSLGGNKLTGHIPSTL-GRLTSLQILDLSSNQLHSSIPLVI---- 344 (526)
Q Consensus 275 ~~~L~~L~L~~n~l~g~~p~~l~~-----~~~L~~L~l~~n~l~~~~p~~l-~~l~~L~~L~Ls~n~l~~~~~~~~---- 344 (526)
.+.|+.|++++|.++......+.. .++|++|+|++|.++......+ ..+++|+.|+|++|.++......+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 467999999999998644433333 3799999999999875422222 345789999999999975433333
Q ss_pred -cCCCCCCeecCcCCcCccc----CcccccCCCCCCEEecCCCcCccc----chHHhhcCcCCCEEEccCCcCccc----
Q 009771 345 -GNFSALSYLDLSDNRICGI----IPDELTKLSHLKYLNLSSNLLSGQ----IPFAIGKLFNLASLDLSKNKLSGS---- 411 (526)
Q Consensus 345 -~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~----~~~~~~~~~~L~~L~l~~n~l~~~---- 411 (526)
...++|++|+|++|.++.. ++..+...++|++|+|++|.+++. ++..+...++|++|++++|.+++.
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~ 230 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALA 230 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHH
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHH
Confidence 3568899999999999763 344457789999999999999754 356677888999999999999864
Q ss_pred ccccccCCCCCCeEEcCCCCCCchhc
Q 009771 412 IPTEIGNCSELRNLTLNHNSLNGKLA 437 (526)
Q Consensus 412 ~~~~~~~l~~L~~l~l~~n~l~~~~~ 437 (526)
+...+...++|+.|++++|.++.+..
T Consensus 231 l~~~L~~~~~L~~L~Ls~N~i~~~g~ 256 (372)
T 3un9_A 231 LARAAREHPSLELLHLYFNELSSEGR 256 (372)
T ss_dssp HHHHHHHCSSCCEEECTTSSCCHHHH
T ss_pred HHHHHHhCCCCCEEeccCCCCCHHHH
Confidence 33445567899999999999986544
No 148
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.20 E-value=6.3e-11 Score=117.15 Aligned_cols=105 Identities=24% Similarity=0.229 Sum_probs=86.7
Q ss_pred EEeCCCC-CCCCCCchhccCCCCCCEEEccC-ccCCccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccC
Q 009771 105 YLDLGSN-NLSGSIPSQIDSLSNLTYIYLYE-NNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDG 182 (526)
Q Consensus 105 ~L~l~~n-~~~~~~p~~l~~l~~L~~L~Ls~-n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~ 182 (526)
.++++++ ++++ +|. +..+++|++|+|++ |.+.+..|..|+++++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 12 ~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4677777 7874 787 99999999999996 999987778899999999999999999988888899999999999999
Q ss_pred CcCCccCCcccccCcccccCCCCCCEEEccCCcCCCc
Q 009771 183 NKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGT 219 (526)
Q Consensus 183 n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~ 219 (526)
|++++..+..| ..+ .|+.|++.+|.+...
T Consensus 90 N~l~~~~~~~~-------~~~-~L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 90 NALESLSWKTV-------QGL-SLQELVLSGNPLHCS 118 (347)
T ss_dssp SCCSCCCSTTT-------CSC-CCCEEECCSSCCCCC
T ss_pred CccceeCHHHc-------ccC-CceEEEeeCCCccCC
Confidence 99986554433 233 389999999988743
No 149
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.12 E-value=6.8e-09 Score=104.36 Aligned_cols=318 Identities=12% Similarity=0.137 Sum_probs=180.5
Q ss_pred cCCCCcCCCC-CCCEEeCCCCCCCCCCchhccCCCCCCEEEccCcc---CCccCCcccCCCCCCCEEEccCCCCCCCCcc
Q 009771 92 LGRLNFSCFP-NLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENN---LTGTIPKEIGSLRNLEVLDLGSNNLNGTIPI 167 (526)
Q Consensus 92 ~~~~~~~~l~-~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~---~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~ 167 (526)
++..+|.+++ .|+.+.+..+ ++..-..+|.+|++|+.+.+..|. ++..-...|.++.+|+.+.+..+ ++.....
T Consensus 54 Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~ 131 (394)
T 4gt6_A 54 IGDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSE 131 (394)
T ss_dssp ECTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTT
T ss_pred cCHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhh
Confidence 4466787774 5899988754 444445678899999999988764 44333456778888888877654 3323344
Q ss_pred ccCCCCCCCEEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCcccccccccCCCCchh
Q 009771 168 EIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELDLSSNKLGGVLPQE 247 (526)
Q Consensus 168 ~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~ 247 (526)
.+.++.+|+.+.+..+. ...... .+..+.+|+.+.+..+ +...-..+|. ..+|+.+.+..+- .......
T Consensus 132 aF~~c~~L~~i~lp~~~-~~I~~~-------~F~~c~~L~~i~~~~~-~~~I~~~aF~-~~~l~~i~ip~~~-~~i~~~a 200 (394)
T 4gt6_A 132 AFHHCEELDTVTIPEGV-TSVADG-------MFSYCYSLHTVTLPDS-VTAIEERAFT-GTALTQIHIPAKV-TRIGTNA 200 (394)
T ss_dssp TTTTCTTCCEEECCTTC-CEECTT-------TTTTCTTCCEEECCTT-CCEECTTTTT-TCCCSEEEECTTC-CEECTTT
T ss_pred hhhhhccccccccccee-eeeccc-------ceecccccccccccce-eeEecccccc-ccceeEEEECCcc-cccccch
Confidence 57788889888886432 211111 2456778888887654 3322223343 3567777765432 2122345
Q ss_pred hhcCcCCCeeecccccCCCCCCccc--------------cCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCc
Q 009771 248 IENLKSLTALSMDANNLGGPIPSTL--------------FRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLT 313 (526)
Q Consensus 248 l~~l~~L~~L~l~~n~l~~~~p~~l--------------~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~ 313 (526)
+..+.++.......+.... +...+ .....+..+.+.. .++..-...|.++++|+.+.+.++...
T Consensus 201 f~~c~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~-~v~~i~~~aF~~c~~L~~i~lp~~~~~ 278 (394)
T 4gt6_A 201 FSECFALSTITSDSESYPA-IDNVLYEKSANGDYALIRYPSQREDPAFKIPN-GVARIETHAFDSCAYLASVKMPDSVVS 278 (394)
T ss_dssp TTTCTTCCEEEECCSSSCB-SSSCEEEECTTSCEEEEECCTTCCCSEEECCT-TEEEECTTTTTTCSSCCEEECCTTCCE
T ss_pred hhhccccceeccccccccc-ccceeecccccccccccccccccccceEEcCC-cceEcccceeeecccccEEecccccce
Confidence 5666667666554433221 11000 0111222222221 111122345677778888877654432
Q ss_pred CCCCCCCCCCCcccEEECCCCcCCCCCcccccCCCCCCeecCcCCcCcccCcccccCCCCCCEEecCCCcCcccchHHhh
Q 009771 314 GHIPSTLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLLSGQIPFAIG 393 (526)
Q Consensus 314 ~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 393 (526)
.....|.+++.|+.+.+.. .++.....+|.++.+|+.+++..+ ++......|..+.+|+.+.+..+ ++..-..+|.
T Consensus 279 -I~~~aF~~c~~L~~i~l~~-~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~ 354 (394)
T 4gt6_A 279 -IGTGAFMNCPALQDIEFSS-RITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFS 354 (394)
T ss_dssp -ECTTTTTTCTTCCEEECCT-TCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGT
T ss_pred -ecCcccccccccccccCCC-cccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhh
Confidence 3345667777888887753 344344456777788888887654 44444556777788888887654 4434456777
Q ss_pred cCcCCCEEEccCCcCcccccccccCCCCCCeEEcCCCC
Q 009771 394 KLFNLASLDLSKNKLSGSIPTEIGNCSELRNLTLNHNS 431 (526)
Q Consensus 394 ~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~ 431 (526)
+|.+|+.+++.++.... ..+..+..|+.+.+..+.
T Consensus 355 ~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~ 389 (394)
T 4gt6_A 355 NCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGS 389 (394)
T ss_dssp TCTTCCEEEESSCHHHH---HTCBCCCCC---------
T ss_pred CCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCC
Confidence 88888888877765332 245566667777665543
No 150
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.00 E-value=1.7e-08 Score=101.44 Aligned_cols=308 Identities=11% Similarity=0.128 Sum_probs=188.0
Q ss_pred EEEEEcCCCceecccCCCCcCCCCCCCEEeCCCCC---CCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEE
Q 009771 78 ITDIGLQKSNIKGELGRLNFSCFPNLQYLDLGSNN---LSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVL 154 (526)
Q Consensus 78 v~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~---~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L 154 (526)
++++.++..- ..++..+|.++++|+.+.+..+. ++..-..+|..+.+|+.+.+..+ ++..-...|..+.+|+.+
T Consensus 66 L~sI~iP~sv--t~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i 142 (394)
T 4gt6_A 66 LTSVQIPDTV--TEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTV 142 (394)
T ss_dssp CCEEEECTTC--CEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEE
T ss_pred CEEEEECCCe--eEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhcccccc
Confidence 5666665321 12347789999999999997653 44333467888999999888765 443444668899999999
Q ss_pred EccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCchhhcCcCccCccc
Q 009771 155 DLGSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPKEIGSLRNLKELD 234 (526)
Q Consensus 155 ~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~ 234 (526)
.+..+ +.......+.++.+|+.+.+..+ ++......| ...+|+.+.+..+- ......++..+.+++...
T Consensus 143 ~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF--------~~~~l~~i~ip~~~-~~i~~~af~~c~~l~~~~ 211 (394)
T 4gt6_A 143 TIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAF--------TGTALTQIHIPAKV-TRIGTNAFSECFALSTIT 211 (394)
T ss_dssp ECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTT--------TTCCCSEEEECTTC-CEECTTTTTTCTTCCEEE
T ss_pred cccce-eeeecccceecccccccccccce-eeEeccccc--------cccceeEEEECCcc-cccccchhhhccccceec
Confidence 99754 33234456788899999998764 332222222 33568888775432 223334566666666655
Q ss_pred ccccccCCCCchh--------------hhcCcCCCeeecccccCCCCCCccccCCCccceeecccccCCCCCchhhhCCC
Q 009771 235 LSSNKLGGVLPQE--------------IENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLK 300 (526)
Q Consensus 235 l~~n~l~~~~p~~--------------l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~ 300 (526)
...+..... ... +.....+..+.+.. .+...-...|..+.+|+.+.+..+.. ......+.+++
T Consensus 212 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~-~v~~i~~~aF~~c~~L~~i~lp~~~~-~I~~~aF~~c~ 288 (394)
T 4gt6_A 212 SDSESYPAI-DNVLYEKSANGDYALIRYPSQREDPAFKIPN-GVARIETHAFDSCAYLASVKMPDSVV-SIGTGAFMNCP 288 (394)
T ss_dssp ECCSSSCBS-SSCEEEECTTSCEEEEECCTTCCCSEEECCT-TEEEECTTTTTTCSSCCEEECCTTCC-EECTTTTTTCT
T ss_pred ccccccccc-cceeecccccccccccccccccccceEEcCC-cceEcccceeeecccccEEecccccc-eecCccccccc
Confidence 443322110 000 00112223333321 11112234566788888888865433 23345678889
Q ss_pred CCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCCCCCcccccCCCCCCeecCcCCcCcccCcccccCCCCCCEEecC
Q 009771 301 NLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICGIIPDELTKLSHLKYLNLS 380 (526)
Q Consensus 301 ~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 380 (526)
+|+.+.+.. .+.......|.++.+|+.+++..+ ++.....+|.+|.+|+.+.+..+ ++......|..+.+|+.+++.
T Consensus 289 ~L~~i~l~~-~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~ 365 (394)
T 4gt6_A 289 ALQDIEFSS-RITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYS 365 (394)
T ss_dssp TCCEEECCT-TCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEES
T ss_pred ccccccCCC-cccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEEC
Confidence 999998864 444444567888899999999764 55445567888999999999754 554556778899999999998
Q ss_pred CCcCcccchHHhhcCcCCCEEEccCCcC
Q 009771 381 SNLLSGQIPFAIGKLFNLASLDLSKNKL 408 (526)
Q Consensus 381 ~n~l~~~~~~~~~~~~~L~~L~l~~n~l 408 (526)
++... ..++..+.+|+.+.+..+.+
T Consensus 366 ~~~~~---~~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 366 GSRSQ---WNAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp SCHHH---HHTCBCCCCC----------
T ss_pred Cceee---hhhhhccCCCCEEEeCCCCE
Confidence 87543 24566777888888765543
No 151
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.96 E-value=7.5e-10 Score=109.31 Aligned_cols=165 Identities=17% Similarity=0.236 Sum_probs=89.8
Q ss_pred CCchhhhcCcCCCeeecccccCCCCCCccccCCCccceeecccccCCCCCchhhh--CCCCCcEEEeeCc--cCcCCCCC
Q 009771 243 VLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIV--NLKNLTSLSLGGN--KLTGHIPS 318 (526)
Q Consensus 243 ~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~--~~~~L~~L~l~~n--~l~~~~p~ 318 (526)
.+...+..+++|+.|.+++|.- -.++. + .+++|+.|++..|.++......+. .+++|+.|+|+.+ ...+..
T Consensus 163 ~L~~ll~~~P~L~~L~L~g~~~-l~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~-- 237 (362)
T 2ra8_A 163 DLSPVLDAMPLLNNLKIKGTNN-LSIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDG-- 237 (362)
T ss_dssp BCHHHHHTCTTCCEEEEECCBT-CBCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCS--
T ss_pred CHHHHHhcCCCCcEEEEeCCCC-ceecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccch--
Confidence 3445667778888888877621 12222 2 367888888887776543333343 5778888887532 111110
Q ss_pred CCCCCCcccEEECCCCcCCCCCcccc--cCCCCCCeecCcCCcCcccCcccc---cCCCCCCEEecCCCcCcccc----h
Q 009771 319 TLGRLTSLQILDLSSNQLHSSIPLVI--GNFSALSYLDLSDNRICGIIPDEL---TKLSHLKYLNLSSNLLSGQI----P 389 (526)
Q Consensus 319 ~l~~l~~L~~L~Ls~n~l~~~~~~~~--~~l~~L~~L~L~~n~l~~~~~~~~---~~l~~L~~L~L~~n~l~~~~----~ 389 (526)
.+. .+. ..+ ..+++|++|++.+|.+.+..+..+ ..+++|++|+|+.|.+++.. +
T Consensus 238 ~~~---~l~--------------~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~ 300 (362)
T 2ra8_A 238 DMN---VFR--------------PLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLL 300 (362)
T ss_dssp CGG---GTG--------------GGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHH
T ss_pred hHH---HHH--------------HHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHH
Confidence 000 000 001 235666666666666654332222 24567777777777776532 2
Q ss_pred HHhhcCcCCCEEEccCCcCcccccccccC-CCCCCeEEcCCCC
Q 009771 390 FAIGKLFNLASLDLSKNKLSGSIPTEIGN-CSELRNLTLNHNS 431 (526)
Q Consensus 390 ~~~~~~~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~l~l~~n~ 431 (526)
..+..+++|+.|++++|.+++..-..+.. + ...++++++.
T Consensus 301 ~~L~~l~~L~~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 301 DHVDKIKHLKFINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp TTHHHHTTCSEEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred hhcccCCcceEEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 23345577777777777776544333332 2 3456666655
No 152
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.93 E-value=4.7e-10 Score=110.76 Aligned_cols=82 Identities=23% Similarity=0.256 Sum_probs=47.1
Q ss_pred cCCCCCCCEEeCCCCCCC---------CCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEccCCCCCCCCcc
Q 009771 97 FSCFPNLQYLDLGSNNLS---------GSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNLNGTIPI 167 (526)
Q Consensus 97 ~~~l~~L~~L~l~~n~~~---------~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l~~~~p~ 167 (526)
...+++|+.|.+...... +.+...+..+++|+.|+|++|.-. .++. + .+++|++|+|..+.+......
T Consensus 135 ~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~ 211 (362)
T 2ra8_A 135 KEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVE 211 (362)
T ss_dssp HHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHH
T ss_pred hhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHH
Confidence 456778888888654321 224455566777777777766211 2233 3 266777777776665433222
Q ss_pred ccC--CCCCCCEEEcc
Q 009771 168 EIG--SVRNLETLSLD 181 (526)
Q Consensus 168 ~l~--~l~~L~~L~L~ 181 (526)
.+. .+++|++|+|+
T Consensus 212 ~l~~~~lp~L~~L~L~ 227 (362)
T 2ra8_A 212 DILGSDLPNLEKLVLY 227 (362)
T ss_dssp HHHHSBCTTCCEEEEE
T ss_pred HHHHccCCCCcEEEEe
Confidence 332 56777777764
No 153
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=98.88 E-value=5e-11 Score=115.13 Aligned_cols=84 Identities=19% Similarity=0.295 Sum_probs=58.4
Q ss_pred CCCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccc-cccCCCCCCcccchHHHHHHHHHHH
Q 009771 431 SLNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLIN-VLDQRLSPPVNQKIVQDIILVSTIA 508 (526)
Q Consensus 431 ~l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~-~~d~~l~~~~~~~~~~~~~~~~~la 508 (526)
...||+......+.|+|||||||+++|++| |+.|...... ..+.+ +.+....+ . ..++...+.+++
T Consensus 213 ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~--------~~~~~~i~~~~~~~-~---p~~~~~~~~~li 280 (308)
T 4gt4_A 213 WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN--------QDVVEMIRNRQVLP-C---PDDCPAWVYALM 280 (308)
T ss_dssp GCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH--------HHHHHHHHTTCCCC-C---CTTCCHHHHHHH
T ss_pred ccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHcCCCCC-C---cccchHHHHHHH
Confidence 356898888899999999999999999999 8989542211 01111 21211111 1 112344567889
Q ss_pred HhcCCCCCCCCCCccccC
Q 009771 509 FACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 509 ~~C~~~~p~~RP~m~~v~ 526 (526)
..|++.+|++||+|.||+
T Consensus 281 ~~C~~~dP~~RPs~~ei~ 298 (308)
T 4gt4_A 281 IECWNEFPSRRPRFKDIH 298 (308)
T ss_dssp HHHTCSSGGGSCCHHHHH
T ss_pred HHHcCCChhHCcCHHHHH
Confidence 999999999999999874
No 154
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=98.80 E-value=2.4e-10 Score=110.00 Aligned_cols=90 Identities=17% Similarity=0.217 Sum_probs=55.9
Q ss_pred CCCchhcc---cccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHH
Q 009771 431 SLNGKLAH---TMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTI 507 (526)
Q Consensus 431 ~l~~~~~~---~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l 507 (526)
.+.||+.. ....+.|+|||||||+++|++||+.|........ ............+.+.. ...++...+.++
T Consensus 200 ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~--~~~~~~~~~~~~p~~~~----~~~~~~~~l~~l 273 (307)
T 3omv_A 200 WMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD--QIIFMVGRGYASPDLSK----LYKNCPKAMKRL 273 (307)
T ss_dssp SCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH--HHHHHHHTTCCCCCSTT----SCTTSCHHHHHH
T ss_pred ccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHH--HHHHHHhcCCCCCCccc----ccccchHHHHHH
Confidence 35688764 2357899999999999999999999964321100 00000001111222211 111233456678
Q ss_pred HHhcCCCCCCCCCCccccC
Q 009771 508 AFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 508 a~~C~~~~p~~RP~m~~v~ 526 (526)
...|++.+|++||+|.||+
T Consensus 274 i~~cl~~dP~~RPs~~ei~ 292 (307)
T 3omv_A 274 VADCVKKVKEERPLFPQIL 292 (307)
T ss_dssp HHHHTCSSSTTSCCHHHHH
T ss_pred HHHHcCCCHhHCcCHHHHH
Confidence 8999999999999999873
No 155
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=98.79 E-value=2.1e-10 Score=111.84 Aligned_cols=84 Identities=25% Similarity=0.325 Sum_probs=57.6
Q ss_pred CCCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCcccccccc-CCCCCCcccchHHHHHHHHHHH
Q 009771 431 SLNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLD-QRLSPPVNQKIVQDIILVSTIA 508 (526)
Q Consensus 431 ~l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d-~~l~~~~~~~~~~~~~~~~~la 508 (526)
...||+......+.|+|||||||+++|++| |+.|....... ..+..+.. .++..+ ..+..++.++.
T Consensus 226 ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~-------~~~~~i~~g~~~~~p-----~~~~~~~~~li 293 (329)
T 4aoj_A 226 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT-------EAIDCITQGRELERP-----RACPPEVYAIM 293 (329)
T ss_dssp GCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH-------HHHHHHHHTCCCCCC-----TTCCHHHHHHH
T ss_pred ccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH-------HHHHHHHcCCCCCCc-----ccccHHHHHHH
Confidence 356898888899999999999999999999 89995432110 00111111 122111 11233466788
Q ss_pred HhcCCCCCCCCCCccccC
Q 009771 509 FACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 509 ~~C~~~~p~~RP~m~~v~ 526 (526)
..|++.+|++||+|.||+
T Consensus 294 ~~cl~~dP~~RPs~~ei~ 311 (329)
T 4aoj_A 294 RGCWQREPQQRHSIKDVH 311 (329)
T ss_dssp HHHCCSSTTTSCCHHHHH
T ss_pred HHHcCcChhHCcCHHHHH
Confidence 999999999999999874
No 156
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.74 E-value=1.3e-10 Score=108.95 Aligned_cols=82 Identities=28% Similarity=0.342 Sum_probs=47.4
Q ss_pred CCCCCCCEEEccCCCCCC--CCccccCCCCCCCEEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCcCch-
Q 009771 146 GSLRNLEVLDLGSNNLNG--TIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGTIPK- 222 (526)
Q Consensus 146 ~~l~~L~~L~L~~n~l~~--~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~~p~- 222 (526)
.++++|++|+|++|.+++ .+|..+..+++|++|+|++|.+++. ..+. .+..+ +|++|++++|.+.+.+|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~----~l~~l-~L~~L~L~~Npl~~~~~~~ 239 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELD----KIKGL-KLEELWLDGNSLCDTFRDQ 239 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGG----GGTTS-CCSEEECTTSTTGGGCSSH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhh----hcccC-CcceEEccCCcCccccCcc
Confidence 345666666666666665 3444555666667777766666653 1111 12233 677777777777665542
Q ss_pred ------hhcCcCccCccc
Q 009771 223 ------EIGSLRNLKELD 234 (526)
Q Consensus 223 ------~l~~l~~L~~L~ 234 (526)
.+..+++|+.||
T Consensus 240 ~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 240 STYISAIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHHHHHHCTTCCEES
T ss_pred hhHHHHHHHHCcccCeEC
Confidence 355667776665
No 157
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=98.74 E-value=2.9e-10 Score=109.32 Aligned_cols=83 Identities=25% Similarity=0.347 Sum_probs=57.4
Q ss_pred CCCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCC-CCCCcccchHHHHHHHHHHH
Q 009771 431 SLNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQR-LSPPVNQKIVQDIILVSTIA 508 (526)
Q Consensus 431 ~l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~-l~~~~~~~~~~~~~~~~~la 508 (526)
...||.......+.|+|||||||+++|++| |+.|...... ......+.... ...+ ..+..++.++.
T Consensus 196 ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~-------~~~~~~i~~~~~~~~p-----~~~~~~~~~li 263 (299)
T 4asz_A 196 WMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN-------NEVIECITQGRVLQRP-----RTCPQEVYELM 263 (299)
T ss_dssp GCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH-------HHHHHHHHHTCCCCCC-----TTCCHHHHHHH
T ss_pred hcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH-------HHHHHHHHcCCCCCCC-----ccchHHHHHHH
Confidence 356898888899999999999999999999 8999543211 00111122211 1111 11234566788
Q ss_pred HhcCCCCCCCCCCcccc
Q 009771 509 FACLSSQPKSRPTMQRI 525 (526)
Q Consensus 509 ~~C~~~~p~~RP~m~~v 525 (526)
..|++.+|++||+|.||
T Consensus 264 ~~cl~~dP~~RPs~~~i 280 (299)
T 4asz_A 264 LGCWQREPHMRKNIKGI 280 (299)
T ss_dssp HHHTCSSGGGSCCHHHH
T ss_pred HHHcCCChhHCcCHHHH
Confidence 99999999999999987
No 158
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=98.73 E-value=1e-09 Score=106.07 Aligned_cols=95 Identities=18% Similarity=0.240 Sum_probs=59.1
Q ss_pred CCchhcccc------cccccccccccceeeeehhcCCCCCccccccc----cccCCCcc----ccccccCCCCCCcc--c
Q 009771 432 LNGKLAHTM------VVTEKCDVYSFGVVALEILMGRHPGELLSSLS----SSSGPKIM----LINVLDQRLSPPVN--Q 495 (526)
Q Consensus 432 l~~~~~~~~------~~~~k~dvysfGv~llElltg~~P~~~~~~~~----~~~~~~~~----~~~~~d~~l~~~~~--~ 495 (526)
..||+..+. ..++|+|||||||+++|++||+.|........ ........ ...+.+..+.+... .
T Consensus 179 mAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~ 258 (303)
T 3hmm_A 179 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRW 258 (303)
T ss_dssp CCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGG
T ss_pred cCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhcccCCCCCCccc
Confidence 457765432 46789999999999999999988743211110 00000000 11123333332211 1
Q ss_pred chHHHHHHHHHHHHhcCCCCCCCCCCccccC
Q 009771 496 KIVQDIILVSTIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 496 ~~~~~~~~~~~la~~C~~~~p~~RP~m~~v~ 526 (526)
...++...+.+++..|++.+|++||||.||+
T Consensus 259 ~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~ 289 (303)
T 3hmm_A 259 QSCEALRVMAKIMRECWYANGAARLTALRIK 289 (303)
T ss_dssp GSSHHHHHHHHHHHTTCCSSGGGSCCHHHHH
T ss_pred cchHHHHHHHHHHHHHcccCHhHCcCHHHHH
Confidence 2235667788999999999999999999874
No 159
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.68 E-value=1.5e-06 Score=86.66 Aligned_cols=128 Identities=15% Similarity=0.160 Sum_probs=58.1
Q ss_pred cCCCccceeecccccCCCCCchhhhCCCCCcEEEeeCccCcCCCCCCCCCCCcccEEECCCCcCCCCCcccccCCCCCCe
Q 009771 273 FRLTNIEYLSLGFNRFNGSIPREIVNLKNLTSLSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSY 352 (526)
Q Consensus 273 ~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 352 (526)
..+.+|+.+.+..+ +.......+.++..|+.+.+..+ ++..-...|.++.+|+.+.+..+ +.......+.++.+|+.
T Consensus 214 ~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~ 290 (379)
T 4h09_A 214 SYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTK 290 (379)
T ss_dssp TTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCE
T ss_pred ccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccccccc
Confidence 33445555554332 22122234455555555555443 22222334445555555555432 22222334455555555
Q ss_pred ecCcCCcCcccCcccccCCCCCCEEecCCCcCcccchHHhhcCcCCCEEEcc
Q 009771 353 LDLSDNRICGIIPDELTKLSHLKYLNLSSNLLSGQIPFAIGKLFNLASLDLS 404 (526)
Q Consensus 353 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~ 404 (526)
+.+.++.++......|..+.+|+.+.+..+ ++..-..+|.+|.+|+.+.+.
T Consensus 291 i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip 341 (379)
T 4h09_A 291 VVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYP 341 (379)
T ss_dssp EEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCC
T ss_pred ccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEEC
Confidence 555555554444444555555555555433 222223345555555555443
No 160
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.65 E-value=2e-06 Score=85.69 Aligned_cols=298 Identities=11% Similarity=0.088 Sum_probs=172.7
Q ss_pred CEEEEEcCCCceecccCCCCcCCCCCCCEEeCCCCCCCCCCchhccCCCCCCEEEccCccCCccCCcccCCCCCCCEEEc
Q 009771 77 RITDIGLQKSNIKGELGRLNFSCFPNLQYLDLGSNNLSGSIPSQIDSLSNLTYIYLYENNLTGTIPKEIGSLRNLEVLDL 156 (526)
Q Consensus 77 ~v~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L 156 (526)
.++++.++..- ..++..+|.++.+|+.++|..+ ++..-..+|.++ +|+.+.+..+ +...-...|.. .+|+.+.+
T Consensus 47 ~i~~v~ip~~v--t~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~~i~l 120 (379)
T 4h09_A 47 RISEVRVNSGI--TSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLDDFEF 120 (379)
T ss_dssp GCSEEEECTTE--EEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCSEEEC
T ss_pred CCEEEEeCCCc--cChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCcccccC
Confidence 45666665321 1233678888999999998654 443334566666 6777777543 33222234444 47888888
Q ss_pred cCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccccCcccccCCCCCCEEEccCCcCCCc------------Cchhh
Q 009771 157 GSNNLNGTIPIEIGSVRNLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDLSSNKLSGT------------IPKEI 224 (526)
Q Consensus 157 ~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l~~n~l~~~------------~p~~l 224 (526)
..+- .......+.+ .+|+.+.+..+ ++..... .+..+.+++.+.+..+..... ....+
T Consensus 121 p~~~-~~i~~~~F~~-~~l~~~~~~~~-v~~i~~~-------~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (379)
T 4h09_A 121 PGAT-TEIGNYIFYN-SSVKRIVIPKS-VTTIKDG-------IGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESY 190 (379)
T ss_dssp CTTC-CEECTTTTTT-CCCCEEEECTT-CCEECSC-------TTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEEC
T ss_pred CCcc-cccccccccc-ceeeeeeccce-eeccccc-------hhcccccccccccccccceeecccceecccccceeccc
Confidence 6542 2122223333 35555554432 2211111 234566777776654332211 11122
Q ss_pred cCcCccCcccccccccCCCCchhhhcCcCCCeeecccccCCCCCCccccCCCccceeecccccCCCCCchhhhCCCCCcE
Q 009771 225 GSLRNLKELDLSSNKLGGVLPQEIENLKSLTALSMDANNLGGPIPSTLFRLTNIEYLSLGFNRFNGSIPREIVNLKNLTS 304 (526)
Q Consensus 225 ~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~~~~L~~L~L~~n~l~g~~p~~l~~~~~L~~ 304 (526)
.....+..+.+... ........+..+.+|+.+.+..+ +.......+..+.+|+.+.+..+ ++..-...+.++.+|+.
T Consensus 191 ~~~~~~~~~~~~~~-~~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~ 267 (379)
T 4h09_A 191 PAAKTGTEFTIPST-VKTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKT 267 (379)
T ss_dssp CTTCCCSEEECCTT-CCEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCE
T ss_pred cccccccccccccc-eeEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcc
Confidence 23333444443322 11122344566777887777544 22223345667788888888654 44334456778888888
Q ss_pred EEeeCccCcCCCCCCCCCCCcccEEECCCCcCCCCCcccccCCCCCCeecCcCCcCcccCcccccCCCCCCEEecCCCcC
Q 009771 305 LSLGGNKLTGHIPSTLGRLTSLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNLL 384 (526)
Q Consensus 305 L~l~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 384 (526)
+.+..+ +.......|.++.+|+.+.+.++.++.....+|.++.+|+.+.+..+ ++......|..+++|+.+.+..+ +
T Consensus 268 i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v 344 (379)
T 4h09_A 268 LNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-I 344 (379)
T ss_dssp EEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-C
T ss_pred cccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-c
Confidence 888654 43334456788889999999888777666677888899999988754 55455567888889998888654 4
Q ss_pred cccchHHhhcCc
Q 009771 385 SGQIPFAIGKLF 396 (526)
Q Consensus 385 ~~~~~~~~~~~~ 396 (526)
+..-..+|.++.
T Consensus 345 ~~I~~~aF~~c~ 356 (379)
T 4h09_A 345 TLIESGAFEGSS 356 (379)
T ss_dssp CEECTTTTTTSS
T ss_pred CEEchhHhhCCC
Confidence 433345565554
No 161
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=98.63 E-value=1.2e-09 Score=107.34 Aligned_cols=84 Identities=24% Similarity=0.364 Sum_probs=57.3
Q ss_pred CCCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccC--CCCCCcccchHHHHHHHHHH
Q 009771 431 SLNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQ--RLSPPVNQKIVQDIILVSTI 507 (526)
Q Consensus 431 ~l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~--~l~~~~~~~~~~~~~~~~~l 507 (526)
...||.......+.|+|||||||+++|++| |+.|...... ...+...+.. +...+ +. +..++.++
T Consensus 253 ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~-------~~~~~~~i~~g~~~~~p--~~---~~~~~~~l 320 (353)
T 4ase_A 253 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI-------DEEFCRRLKEGTRMRAP--DY---TTPEMYQT 320 (353)
T ss_dssp GCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC-------SHHHHHHHHHTCCCCCC--TT---CCHHHHHH
T ss_pred ccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCH-------HHHHHHHHHcCCCCCCC--cc---CCHHHHHH
Confidence 457898888889999999999999999998 8999543210 1111122211 22111 11 22345677
Q ss_pred HHhcCCCCCCCCCCccccC
Q 009771 508 AFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 508 a~~C~~~~p~~RP~m~~v~ 526 (526)
...|++.+|++||+|.||+
T Consensus 321 i~~c~~~dP~~RPt~~eil 339 (353)
T 4ase_A 321 MLDCWHGEPSQRPTFSELV 339 (353)
T ss_dssp HHHHTCSSGGGSCCHHHHH
T ss_pred HHHHcCcChhHCcCHHHHH
Confidence 8899999999999999874
No 162
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=98.54 E-value=9.4e-09 Score=100.38 Aligned_cols=92 Identities=24% Similarity=0.366 Sum_probs=65.7
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCcc----------ccccccccCCCccccccccCCCCCCcccchHHHH
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGEL----------LSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDI 501 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~----------~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 501 (526)
..||.......+.++||||||++++|++||+.|.+. ...|............+++..+.. ....++.
T Consensus 202 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 278 (326)
T 3uim_A 202 IAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQG---NYKDEEV 278 (326)
T ss_dssp CCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTT---SCCHHHH
T ss_pred cCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhcc---ccCHHHH
Confidence 457877777789999999999999999999999542 112222222222234445554433 2345677
Q ss_pred HHHHHHHHhcCCCCCCCCCCccccC
Q 009771 502 ILVSTIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 502 ~~~~~la~~C~~~~p~~RP~m~~v~ 526 (526)
..+.+++..|++.+|.+||+|.||+
T Consensus 279 ~~l~~li~~cl~~dP~~Rps~~ell 303 (326)
T 3uim_A 279 EQLIQVALLCTQSSPMERPKMSEVV 303 (326)
T ss_dssp HHHHHHHHHHTCSCGGGSCCHHHHH
T ss_pred HHHHHHHHHHhCcCCccCCCHHHHH
Confidence 8899999999999999999999874
No 163
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.50 E-value=1.6e-08 Score=90.11 Aligned_cols=66 Identities=12% Similarity=0.176 Sum_probs=31.7
Q ss_pred cCCCCCCCEEeCCCC-CCCCC----CchhccCCCCCCEEEccCccCCcc----CCcccCCCCCCCEEEccCCCCC
Q 009771 97 FSCFPNLQYLDLGSN-NLSGS----IPSQIDSLSNLTYIYLYENNLTGT----IPKEIGSLRNLEVLDLGSNNLN 162 (526)
Q Consensus 97 ~~~l~~L~~L~l~~n-~~~~~----~p~~l~~l~~L~~L~Ls~n~~~~~----ip~~l~~l~~L~~L~L~~n~l~ 162 (526)
+...+.|++|+|++| .+... +...+...++|++|+|++|.+... +...+...+.|++|+|++|.+.
T Consensus 32 l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 32 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 344555666666665 55432 233444455555555555555421 1222333344555555555544
No 164
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.45 E-value=4.8e-08 Score=86.90 Aligned_cols=89 Identities=17% Similarity=0.221 Sum_probs=43.6
Q ss_pred CCCCCCeecCcCCcCccc----CcccccCCCCCCEEecCCCcCccc----chHHhhcCcCCCEEEc--cCCcCcccc---
Q 009771 346 NFSALSYLDLSDNRICGI----IPDELTKLSHLKYLNLSSNLLSGQ----IPFAIGKLFNLASLDL--SKNKLSGSI--- 412 (526)
Q Consensus 346 ~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~----~~~~~~~~~~L~~L~l--~~n~l~~~~--- 412 (526)
..++|++|+|++|.+... +...+...++|++|+|++|.+++. +...+...++|++|++ ++|.+....
T Consensus 63 ~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~ 142 (185)
T 1io0_A 63 TNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEME 142 (185)
T ss_dssp TCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHH
T ss_pred hCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHH
Confidence 334444555555544332 122233334555555555555432 2334444555666666 556655432
Q ss_pred -cccccCCCCCCeEEcCCCCCCc
Q 009771 413 -PTEIGNCSELRNLTLNHNSLNG 434 (526)
Q Consensus 413 -~~~~~~l~~L~~l~l~~n~l~~ 434 (526)
...+...+.|+.|++++|.+.+
T Consensus 143 l~~~L~~n~~L~~L~L~~n~i~~ 165 (185)
T 1io0_A 143 IANMLEKNTTLLKFGYHFTQQGP 165 (185)
T ss_dssp HHHHHHHCSSCCEEECCCSSHHH
T ss_pred HHHHHHhCCCcCEEeccCCCCCh
Confidence 2233344566666666666543
No 165
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=98.44 E-value=1.9e-08 Score=98.03 Aligned_cols=93 Identities=26% Similarity=0.323 Sum_probs=63.8
Q ss_pred CCCchhcccccccccccccccceeeeehhcCCCCCccccc--------cccccCCCccccccccCCCCCCcccchHHHHH
Q 009771 431 SLNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSS--------LSSSSGPKIMLINVLDQRLSPPVNQKIVQDII 502 (526)
Q Consensus 431 ~l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~--------~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 502 (526)
...||.......+.++||||||++++|++||+.|...... |............++++.+.. ....+...
T Consensus 207 y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 283 (321)
T 2qkw_B 207 YIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLAD---KIRPESLR 283 (321)
T ss_dssp TCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTT---CSCHHHHH
T ss_pred ccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhcc---ccCHHHHH
Confidence 3568877777889999999999999999999998532111 110000111233444554432 22345677
Q ss_pred HHHHHHHhcCCCCCCCCCCccccC
Q 009771 503 LVSTIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 503 ~~~~la~~C~~~~p~~RP~m~~v~ 526 (526)
.+.++...|++.+|++||+|.||+
T Consensus 284 ~l~~li~~~l~~dP~~Rps~~ell 307 (321)
T 2qkw_B 284 KFGDTAVKCLALSSEDRPSMGDVL 307 (321)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred HHHHHHHHHcCCCcccCcCHHHHH
Confidence 788999999999999999999873
No 166
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.35 E-value=2.3e-07 Score=86.86 Aligned_cols=113 Identities=26% Similarity=0.313 Sum_probs=79.0
Q ss_pred cCCCCCCCE--EeCCCCCCC---CCCchhccCCCCCCEEEccCccCCc--cCCcccCCCCCCCEEEccCCCCCCCCcccc
Q 009771 97 FSCFPNLQY--LDLGSNNLS---GSIPSQIDSLSNLTYIYLYENNLTG--TIPKEIGSLRNLEVLDLGSNNLNGTIPIEI 169 (526)
Q Consensus 97 ~~~l~~L~~--L~l~~n~~~---~~~p~~l~~l~~L~~L~Ls~n~~~~--~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l 169 (526)
+...+.|+. ++++.|... +.++....++++|++|+|++|.+++ .+|..+..+++|++|+|++|.+.+. ..+
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l 214 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--REL 214 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhh
Confidence 444455555 667777432 2222223568999999999999998 5667778899999999999999865 334
Q ss_pred CCCC--CCCEEEccCCcCCccCCcccccCcccccCCCCCCEEEc
Q 009771 170 GSVR--NLETLSLDGNKLSGVLPIYFGTIPIEIESLRNLQWLDL 211 (526)
Q Consensus 170 ~~l~--~L~~L~L~~n~l~~~~p~~~~~ip~~l~~l~~L~~L~l 211 (526)
..+. +|++|+|++|.+.+.+|..-......+..+++|+.||=
T Consensus 215 ~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LDg 258 (267)
T 3rw6_A 215 DKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLDG 258 (267)
T ss_dssp GGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEESS
T ss_pred hhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeECC
Confidence 4444 99999999999998766321111123567889998863
No 167
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=98.31 E-value=3.8e-08 Score=93.90 Aligned_cols=83 Identities=18% Similarity=0.314 Sum_probs=52.6
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCc-ccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPV-NQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~-~~~~~~~~~~~~~la~~ 510 (526)
..||.... +.+.++|||||||++.||+||+.|....... ..+...+.....+.. .... ..++.++...
T Consensus 197 mAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~-------~~~~~~i~~~~~~~~~~~~~---~~~~~~li~~ 265 (290)
T 3fpq_A 197 MAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA-------AQIYRRVTSGVKPASFDKVA---IPEVKEIIEG 265 (290)
T ss_dssp CCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH-------HHHHHHHTTTCCCGGGGGCC---CHHHHHHHHH
T ss_pred cCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcH-------HHHHHHHHcCCCCCCCCccC---CHHHHHHHHH
Confidence 56887754 6899999999999999999999995321100 001111111111110 0111 1234567789
Q ss_pred cCCCCCCCCCCcccc
Q 009771 511 CLSSQPKSRPTMQRI 525 (526)
Q Consensus 511 C~~~~p~~RP~m~~v 525 (526)
|++.+|++|||+.|+
T Consensus 266 ~L~~dP~~R~s~~e~ 280 (290)
T 3fpq_A 266 CIRQNKDERYSIKDL 280 (290)
T ss_dssp HSCSSGGGSCCHHHH
T ss_pred HccCChhHCcCHHHH
Confidence 999999999999886
No 168
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=98.22 E-value=2.5e-07 Score=88.93 Aligned_cols=95 Identities=19% Similarity=0.266 Sum_probs=53.6
Q ss_pred CCchhcccc------cccccccccccceeeeehhcCCCCCccccc----ccccc----CCCccccccccCCCCCCccc--
Q 009771 432 LNGKLAHTM------VVTEKCDVYSFGVVALEILMGRHPGELLSS----LSSSS----GPKIMLINVLDQRLSPPVNQ-- 495 (526)
Q Consensus 432 l~~~~~~~~------~~~~k~dvysfGv~llElltg~~P~~~~~~----~~~~~----~~~~~~~~~~d~~l~~~~~~-- 495 (526)
..||..... ..+.++|||||||+++|++||+.|+..... |.... ........+.+....+....
T Consensus 179 ~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (303)
T 3gxj_A 179 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRW 258 (303)
T ss_dssp CCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-CCCCC-CHHHHTTSCCCCCCCGGG
T ss_pred cCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCCccHHHHHHHHHHhhcCCCccccc
Confidence 346655433 445789999999999999999655332111 10000 00001111222222221111
Q ss_pred chHHHHHHHHHHHHhcCCCCCCCCCCccccC
Q 009771 496 KIVQDIILVSTIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 496 ~~~~~~~~~~~la~~C~~~~p~~RP~m~~v~ 526 (526)
...++...+.++...|++.+|++||++.||+
T Consensus 259 ~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~ 289 (303)
T 3gxj_A 259 QSCEALRVMAKIMRECWYANGAARLTALRIK 289 (303)
T ss_dssp GSSHHHHHHHHHHHTTCCSSGGGSCCHHHHH
T ss_pred cchhhHHHHHHHHHHHhccCcccCCCHHHHH
Confidence 1235567788999999999999999999873
No 169
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=98.13 E-value=1.6e-07 Score=90.38 Aligned_cols=95 Identities=16% Similarity=0.224 Sum_probs=53.6
Q ss_pred CCchhcccc------cccccccccccceeeeehhcCCCCCccccc----cccccCCCc---cccccc--cCCCC-CCccc
Q 009771 432 LNGKLAHTM------VVTEKCDVYSFGVVALEILMGRHPGELLSS----LSSSSGPKI---MLINVL--DQRLS-PPVNQ 495 (526)
Q Consensus 432 l~~~~~~~~------~~~~k~dvysfGv~llElltg~~P~~~~~~----~~~~~~~~~---~~~~~~--d~~l~-~~~~~ 495 (526)
..||..... ..+.++|||||||+++|++||..|...... |........ .....+ +.... .+...
T Consensus 184 ~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (301)
T 3q4u_A 184 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRW 263 (301)
T ss_dssp CCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGG
T ss_pred eChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCCCCChhh
Confidence 346655443 456799999999999999999444221110 000000000 011111 11110 01101
Q ss_pred chHHHHHHHHHHHHhcCCCCCCCCCCccccC
Q 009771 496 KIVQDIILVSTIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 496 ~~~~~~~~~~~la~~C~~~~p~~RP~m~~v~ 526 (526)
........+.++...|++.+|++||+|.||+
T Consensus 264 ~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~ 294 (301)
T 3q4u_A 264 FSDPTLTSLAKLMKECWYQNPSARLTALRIK 294 (301)
T ss_dssp GGSHHHHHHHHHHHHHCCSSGGGSCCHHHHH
T ss_pred ccCccHHHHHHHHHHHhhcChhhCCCHHHHH
Confidence 2234566788999999999999999999873
No 170
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=98.13 E-value=1.3e-07 Score=92.24 Aligned_cols=85 Identities=21% Similarity=0.301 Sum_probs=57.2
Q ss_pred CCCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHH
Q 009771 431 SLNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 431 ~l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
...||.......+.++|||||||+++|++| |+.|..... ...+.+.+........ ...+...+.++..
T Consensus 185 y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~--------~~~~~~~~~~~~~~~~---~~~~~~~~~~li~ 253 (327)
T 3poz_A 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP--------ASEISSILEKGERLPQ---PPICTIDVYMIMV 253 (327)
T ss_dssp GSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--------GGGHHHHHHTTCCCCC---CTTBCHHHHHHHH
T ss_pred ccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCC--------HHHHHHHHHcCCCCCC---CccCCHHHHHHHH
Confidence 356888777788999999999999999999 999954211 1112222222211111 1112335667889
Q ss_pred hcCCCCCCCCCCccccC
Q 009771 510 ACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v~ 526 (526)
.|++.+|++||+|.||+
T Consensus 254 ~~l~~~p~~Rps~~ell 270 (327)
T 3poz_A 254 KCWMIDADSRPKFRELI 270 (327)
T ss_dssp HHTCSCGGGSCCHHHHH
T ss_pred HHcCCChhhCCCHHHHH
Confidence 99999999999999873
No 171
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=98.11 E-value=6.6e-07 Score=88.96 Aligned_cols=92 Identities=12% Similarity=-0.003 Sum_probs=54.7
Q ss_pred CCchhccc--ccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHH
Q 009771 432 LNGKLAHT--MVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 432 l~~~~~~~--~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
..||.... ...+.++|||||||+++|++||+.|...........+...............+..... -..+.++..
T Consensus 258 ~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~li~ 334 (371)
T 3q60_A 258 APREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPL---PDFVKTLIG 334 (371)
T ss_dssp CCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCC---CHHHHHHHH
T ss_pred cChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhhhhhccccccchhhccCC---CHHHHHHHH
Confidence 45777665 5678999999999999999999999653211111111110001111111111100111 123456778
Q ss_pred hcCCCCCCCCCCccccC
Q 009771 510 ACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v~ 526 (526)
.|++.+|++||++.|++
T Consensus 335 ~~L~~dP~~Rpt~~e~l 351 (371)
T 3q60_A 335 RFLNFDRRRRLLPLEAM 351 (371)
T ss_dssp HHTCSSTTTCCCHHHHT
T ss_pred HHcCCChhhCCCHHHHh
Confidence 99999999999999874
No 172
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=98.10 E-value=2.1e-07 Score=90.41 Aligned_cols=84 Identities=14% Similarity=0.181 Sum_probs=53.2
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCC-CcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSP-PVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~-~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++|||||||++.||+||+.|..... .......+....... ....... ..+.++-..
T Consensus 223 mAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~-------~~~~~~~i~~~~~~~~~~~~~~s---~~~~~li~~ 292 (336)
T 4g3f_A 223 MAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYF-------RGPLCLKIASEPPPIREIPPSCA---PLTAQAIQE 292 (336)
T ss_dssp CCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTC-------CSCCHHHHHHSCCGGGGSCTTSC---HHHHHHHHH
T ss_pred cCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCC-------HHHHHHHHHcCCCCchhcCccCC---HHHHHHHHH
Confidence 46888777788999999999999999999999953211 111111121111100 0001111 234456678
Q ss_pred cCCCCCCCCCCcccc
Q 009771 511 CLSSQPKSRPTMQRI 525 (526)
Q Consensus 511 C~~~~p~~RP~m~~v 525 (526)
|++.+|++||++.|+
T Consensus 293 ~L~~dP~~R~sa~el 307 (336)
T 4g3f_A 293 GLRKEPVHRASAMEL 307 (336)
T ss_dssp HTCSSGGGSCCHHHH
T ss_pred HccCCHhHCcCHHHH
Confidence 999999999999875
No 173
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=98.05 E-value=1.2e-07 Score=90.89 Aligned_cols=91 Identities=14% Similarity=0.132 Sum_probs=55.7
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|||||||+++|++||+.|....... ........+.......+...........+.++...|
T Consensus 182 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 257 (296)
T 3uzp_A 182 ASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA----TKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFC 257 (296)
T ss_dssp CCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCS----SSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHH
T ss_pred CChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCch----hhhhhhhhhcccccCCchHHHHhhCCHHHHHHHHHH
Confidence 4578777777889999999999999999999996432110 001111111111111000000000123466788999
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|++||++.||+
T Consensus 258 l~~dp~~Rps~~~l~ 272 (296)
T 3uzp_A 258 RSLRFDDKPDYSYLR 272 (296)
T ss_dssp HTSCTTCCCCHHHHH
T ss_pred HhcCcCcCCCHHHHH
Confidence 999999999998863
No 174
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=98.04 E-value=4.2e-07 Score=88.62 Aligned_cols=94 Identities=16% Similarity=0.197 Sum_probs=49.1
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|||||||+++|++||+.|...................+......... ......-..+.++...|
T Consensus 176 ~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~s~~~~~li~~~ 254 (325)
T 3kn6_A 176 AAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEG-EAWKNVSQEAKDLIQGL 254 (325)
T ss_dssp --------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCS-HHHHTSCHHHHHHHHHH
T ss_pred cCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCc-ccccCCCHHHHHHHHHH
Confidence 45677666677889999999999999999999954321100000000001111111111110 11011123455778899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|++||++.||+
T Consensus 255 L~~dP~~Rpt~~ell 269 (325)
T 3kn6_A 255 LTVDPNKRLKMSGLR 269 (325)
T ss_dssp HCCCTTTCCCTTTST
T ss_pred CCCChhHCCCHHHHh
Confidence 999999999999985
No 175
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=98.03 E-value=3.1e-06 Score=73.49 Aligned_cols=83 Identities=13% Similarity=0.155 Sum_probs=40.9
Q ss_pred CCCeecCcCCcCcccCcccccCCCCCCEEecCCCc-CcccchHHhhcC----cCCCEEEccCCc-CcccccccccCCCCC
Q 009771 349 ALSYLDLSDNRICGIIPDELTKLSHLKYLNLSSNL-LSGQIPFAIGKL----FNLASLDLSKNK-LSGSIPTEIGNCSEL 422 (526)
Q Consensus 349 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~~----~~L~~L~l~~n~-l~~~~~~~~~~l~~L 422 (526)
.|++||++++.++...-..+..+++|++|+|++|. +++..-..+..+ ++|++|++++|. +++..-..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 34455555554444433344455555555555553 444333344432 245555555553 554444445555566
Q ss_pred CeEEcCCCC
Q 009771 423 RNLTLNHNS 431 (526)
Q Consensus 423 ~~l~l~~n~ 431 (526)
+.|++++++
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 666665553
No 176
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=98.03 E-value=9e-07 Score=85.33 Aligned_cols=90 Identities=21% Similarity=0.396 Sum_probs=58.6
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccc------cc-cCCCccccccccCCCCCCcccchHHHHHHH
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLS------SS-SGPKIMLINVLDQRLSPPVNQKIVQDIILV 504 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~------~~-~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~ 504 (526)
..||.... ..+.++||||||++++|++||+.|........ .. ......+.+.+++.+. .........+
T Consensus 202 ~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l 276 (307)
T 2nru_A 202 MAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMN----DADSTSVEAM 276 (307)
T ss_dssp CCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCS----CCCHHHHHHH
T ss_pred CChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhcccccc----ccchHHHHHH
Confidence 34665543 47889999999999999999999954321100 00 0001112333444442 2234556678
Q ss_pred HHHHHhcCCCCCCCCCCccccC
Q 009771 505 STIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 505 ~~la~~C~~~~p~~RP~m~~v~ 526 (526)
.++...|++.+|.+||+|.||+
T Consensus 277 ~~li~~cl~~~p~~Rps~~~l~ 298 (307)
T 2nru_A 277 YSVASQCLHEKKNKRPDIKKVQ 298 (307)
T ss_dssp HHHHHHHTCSSTTTSCCHHHHH
T ss_pred HHHHHHHcCCCcccCcCHHHHH
Confidence 8899999999999999999873
No 177
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=98.02 E-value=2.5e-07 Score=89.38 Aligned_cols=89 Identities=17% Similarity=0.229 Sum_probs=53.0
Q ss_pred CCchhcc---cccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHH
Q 009771 432 LNGKLAH---TMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIA 508 (526)
Q Consensus 432 l~~~~~~---~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la 508 (526)
..||... ....+.++|||||||+++|++||+.|......... ...........+.+.... ..+...+.++.
T Consensus 201 ~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~--~~~~~~~~~~~~~~~~~~----~~~~~~l~~li 274 (307)
T 3lb7_A 201 MAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ--IIFMVGRGYASPDLSKLY----KNCPKAMKRLV 274 (307)
T ss_dssp CCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH--HHHHHHHTCCCCCSTTSC----SSSCHHHHHHH
T ss_pred ECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHH--HHHHHhcCCCCcchhhhh----cCCcHHHHHHH
Confidence 4566553 44567899999999999999999999542211000 000000011111111100 11223456778
Q ss_pred HhcCCCCCCCCCCccccC
Q 009771 509 FACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 509 ~~C~~~~p~~RP~m~~v~ 526 (526)
..|++.+|++||++.||+
T Consensus 275 ~~~l~~~p~~RPs~~~il 292 (307)
T 3lb7_A 275 ADCVKKVKEERPLFPQIL 292 (307)
T ss_dssp HHHSCSSSTTSCCHHHHH
T ss_pred HHHhhCChhhCcCHHHHH
Confidence 899999999999999863
No 178
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=98.02 E-value=1.6e-07 Score=91.72 Aligned_cols=84 Identities=19% Similarity=0.353 Sum_probs=54.8
Q ss_pred CCCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 431 SLNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 431 ~l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
...||.......+.++||||+||++.||+||+.|..... ....+..++.....+.. ....++ +.++-..
T Consensus 191 YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~-------~~~~~~~i~~~~~~~~~-~~~s~~---~~~li~~ 259 (350)
T 4b9d_A 191 YLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS-------MKNLVLKIISGSFPPVS-LHYSYD---LRSLVSQ 259 (350)
T ss_dssp TCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS-------HHHHHHHHHHTCCCCCC-TTSCHH---HHHHHHH
T ss_pred ccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC-------HHHHHHHHHcCCCCCCC-ccCCHH---HHHHHHH
Confidence 356888877778999999999999999999999954210 00011222222221111 111223 3456678
Q ss_pred cCCCCCCCCCCcccc
Q 009771 511 CLSSQPKSRPTMQRI 525 (526)
Q Consensus 511 C~~~~p~~RP~m~~v 525 (526)
|++.+|++||++.|+
T Consensus 260 ~L~~dP~~R~s~~e~ 274 (350)
T 4b9d_A 260 LFKRNPRDRPSVNSI 274 (350)
T ss_dssp HTCSSGGGSCCHHHH
T ss_pred HccCChhHCcCHHHH
Confidence 999999999999886
No 179
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=98.00 E-value=1.8e-07 Score=93.21 Aligned_cols=85 Identities=20% Similarity=0.316 Sum_probs=55.9
Q ss_pred CCCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHH
Q 009771 431 SLNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 431 ~l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
...||.......+.++|||||||+++|+++ |+.|...... ..+.+.++.....+. .......+.++..
T Consensus 216 y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~--------~~~~~~i~~~~~~~~---~~~~~~~l~~li~ 284 (373)
T 2qol_A 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN--------QDVIKAVDEGYRLPP---PMDCPAALYQLML 284 (373)
T ss_dssp TSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH--------HHHHHHHHTTEECCC---CTTCBHHHHHHHH
T ss_pred ccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHcCCCCCC---CccccHHHHHHHH
Confidence 356888877788999999999999999998 9999532110 011112222211111 1122345668899
Q ss_pred hcCCCCCCCCCCccccC
Q 009771 510 ACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v~ 526 (526)
.|++.+|++||+|.||+
T Consensus 285 ~cl~~dp~~RPs~~~i~ 301 (373)
T 2qol_A 285 DCWQKDRNNRPKFEQIV 301 (373)
T ss_dssp HHTCSSGGGSCCHHHHH
T ss_pred HHhCcChhhCcCHHHHH
Confidence 99999999999999873
No 180
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=97.99 E-value=5.2e-07 Score=88.68 Aligned_cols=78 Identities=18% Similarity=0.277 Sum_probs=49.1
Q ss_pred ccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhcCCCCCCCC
Q 009771 440 MVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 519 (526)
Q Consensus 440 ~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 519 (526)
...+.++|||||||+++|++||+.|........ .....++++........... ..+.++...|++.+|.+|
T Consensus 195 ~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~------~~~~~~~~~~~~~~~~~~~~---~~l~~li~~~L~~dp~~R 265 (343)
T 3dbq_A 195 SKISPKSDVWSLGCILYYMTYGKTPFQQIINQI------SKLHAIIDPNHEIEFPDIPE---KDLQDVLKCCLKRDPKQR 265 (343)
T ss_dssp --CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH------HHHHHHHCTTSCCCCCCCSC---HHHHHHHHHHTCSSTTTS
T ss_pred cCCCchhhHHHHHHHHHHHHhCCCcchhhhhHH------HHHHHHhcCCcccCCcccCC---HHHHHHHHHHcCCChhHC
Confidence 567889999999999999999999964321110 01222333322211111111 234577889999999999
Q ss_pred CCccccC
Q 009771 520 PTMQRIS 526 (526)
Q Consensus 520 P~m~~v~ 526 (526)
|+|.||+
T Consensus 266 pt~~e~l 272 (343)
T 3dbq_A 266 ISIPELL 272 (343)
T ss_dssp CCHHHHH
T ss_pred CCHHHHH
Confidence 9999873
No 181
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=97.99 E-value=1.4e-07 Score=90.47 Aligned_cols=91 Identities=14% Similarity=0.142 Sum_probs=55.2
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|||||||+++|++||+.|........ .......+.......+...........+.++...|
T Consensus 182 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 257 (296)
T 4hgt_A 182 ASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAT----KRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFC 257 (296)
T ss_dssp CCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSS----SSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHH
T ss_pred cchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhh----hhhhhhhhhcccccchhhhhhccCCHHHHHHHHHH
Confidence 45777777778899999999999999999999964321110 00111111111111000000000123466788899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|++||++.||+
T Consensus 258 l~~~p~~Rpt~~~l~ 272 (296)
T 4hgt_A 258 RSLRFDDKPDYSYLR 272 (296)
T ss_dssp HTSCTTCCCCHHHHH
T ss_pred HhcCCCCCCCHHHHH
Confidence 999999999998863
No 182
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=97.99 E-value=4.1e-07 Score=88.51 Aligned_cols=95 Identities=11% Similarity=0.178 Sum_probs=56.0
Q ss_pred CCchhccc-----ccccccccccccceeeeehhcCCCCCcccccccccc-------CCCc-cccc-cccCCCCCCccc--
Q 009771 432 LNGKLAHT-----MVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSS-------GPKI-MLIN-VLDQRLSPPVNQ-- 495 (526)
Q Consensus 432 l~~~~~~~-----~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~-------~~~~-~~~~-~~d~~l~~~~~~-- 495 (526)
..||.... ...+.++|||||||+++|++||+.|........... .+.. .+.+ +......+....
T Consensus 200 ~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (322)
T 3soc_A 200 MAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYW 279 (322)
T ss_dssp CCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGG
T ss_pred cCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCccccc
Confidence 34665543 356778999999999999999999954211100000 0000 0111 111111111101
Q ss_pred chHHHHHHHHHHHHhcCCCCCCCCCCccccC
Q 009771 496 KIVQDIILVSTIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 496 ~~~~~~~~~~~la~~C~~~~p~~RP~m~~v~ 526 (526)
....+...+.++...|++.+|++||+|.||+
T Consensus 280 ~~~~~~~~l~~li~~cl~~dP~~Rps~~ell 310 (322)
T 3soc_A 280 QKHAGMAMLCETIEECWDHDAEARLSAGCVG 310 (322)
T ss_dssp GSSHHHHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred cccchHHHHHHHHHHHccCChhhCcCHHHHH
Confidence 1224456688899999999999999999874
No 183
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=97.97 E-value=2.3e-07 Score=94.93 Aligned_cols=83 Identities=28% Similarity=0.383 Sum_probs=54.8
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++|||||||+++|++| |+.|....... .+...+......+. ...+...+.++...
T Consensus 352 ~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~--------~~~~~i~~~~~~~~---~~~~~~~l~~li~~ 420 (454)
T 1qcf_A 352 TAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--------EVIRALERGYRMPR---PENCPEELYNIMMR 420 (454)
T ss_dssp SCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--------HHHHHHHHTCCCCC---CTTSCHHHHHHHHH
T ss_pred cCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCCCCCC---CCCCCHHHHHHHHH
Confidence 45787777788999999999999999999 99985421100 01111111111110 01123346678899
Q ss_pred cCCCCCCCCCCcccc
Q 009771 511 CLSSQPKSRPTMQRI 525 (526)
Q Consensus 511 C~~~~p~~RP~m~~v 525 (526)
|++.+|++||+|.+|
T Consensus 421 cl~~dp~~RPt~~~i 435 (454)
T 1qcf_A 421 CWKNRPEERPTFEYI 435 (454)
T ss_dssp HTCSSGGGSCCHHHH
T ss_pred HccCChhHCcCHHHH
Confidence 999999999999886
No 184
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=97.96 E-value=7.2e-07 Score=86.93 Aligned_cols=86 Identities=21% Similarity=0.304 Sum_probs=54.0
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++||||+||++.||+||+.|........ .. . .+.+...+.+... ....++ +..+-..|
T Consensus 237 mAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~--~~-~-~i~~~~~~~~~~~--~~~s~~---~~dli~~~ 307 (346)
T 4fih_A 237 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK--AM-K-MIRDNLPPRLKNL--HKVSPS---LKGFLDRL 307 (346)
T ss_dssp CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HH-H-HHHHSSCCCCSCG--GGSCHH---HHHHHHHH
T ss_pred CCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH--HH-H-HHHcCCCCCCCcc--ccCCHH---HHHHHHHH
Confidence 46888777778999999999999999999999953211000 00 0 0111111122111 111223 34566789
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|++||++.|++
T Consensus 308 L~~dP~~R~ta~e~l 322 (346)
T 4fih_A 308 LVRDPAQRATAAELL 322 (346)
T ss_dssp SCSSTTTSCCHHHHT
T ss_pred cCCChhHCcCHHHHh
Confidence 999999999998874
No 185
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=97.95 E-value=4.4e-07 Score=87.64 Aligned_cols=87 Identities=23% Similarity=0.506 Sum_probs=54.6
Q ss_pred CCCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 431 SLNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 431 ~l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
...||.......+.++||||||++++|++||+.|...... ........+.....+...... ...+.++...
T Consensus 169 y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~------~~~~~~~~~~~~~~~~~~~~~---~~~l~~li~~ 239 (307)
T 2eva_A 169 WMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGG------PAFRIMWAVHNGTRPPLIKNL---PKPIESLMTR 239 (307)
T ss_dssp SSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCS------SHHHHHHHHHTTCCCCCBTTC---CHHHHHHHHH
T ss_pred eEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCc------cHHHHHHHHhcCCCCCccccc---CHHHHHHHHH
Confidence 3467877777889999999999999999999999542211 000000000000001000111 1235577889
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||+|.||+
T Consensus 240 ~l~~dp~~Rps~~ell 255 (307)
T 2eva_A 240 CWSKDPSQRPSMEEIV 255 (307)
T ss_dssp HTCSSGGGSCCHHHHH
T ss_pred HhcCChhhCcCHHHHH
Confidence 9999999999998863
No 186
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=97.95 E-value=7.2e-07 Score=86.90 Aligned_cols=79 Identities=22% Similarity=0.335 Sum_probs=46.9
Q ss_pred cccccccccccccceeeeehhcCCCCCccccccccccCCCcccccccc---CCCCCCcccchHHHHHHHHHHHHhcCCCC
Q 009771 439 TMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLD---QRLSPPVNQKIVQDIILVSTIAFACLSSQ 515 (526)
Q Consensus 439 ~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d---~~l~~~~~~~~~~~~~~~~~la~~C~~~~ 515 (526)
....+.++||||||++++|++||+.|......... ....++. +.+........ -..+.++...|++.+
T Consensus 203 ~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~---~~~l~~li~~~l~~d 273 (327)
T 3aln_A 203 RQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD------QLTQVVKGDPPQLSNSEEREF---SPSFINFVNLCLTKD 273 (327)
T ss_dssp ---CCSHHHHHHHHHHHHHHHHSCCCSSCC-------------CCCCCSCCCCCCCCSSCCC---CHHHHHHHHHHTCSS
T ss_pred cCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH------HHHHHhcCCCCCCCCcccccC---CHHHHHHHHHHhhCC
Confidence 34567899999999999999999999543211100 0111111 11111000111 234567788999999
Q ss_pred CCCCCCccccC
Q 009771 516 PKSRPTMQRIS 526 (526)
Q Consensus 516 p~~RP~m~~v~ 526 (526)
|++||++.||+
T Consensus 274 p~~Rps~~ell 284 (327)
T 3aln_A 274 ESKRPKYKELL 284 (327)
T ss_dssp GGGSCCHHHHT
T ss_pred hhhCcCHHHHH
Confidence 99999999875
No 187
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=97.95 E-value=2.1e-07 Score=89.27 Aligned_cols=92 Identities=17% Similarity=0.177 Sum_probs=56.1
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCcccccc-cc--ccCCCc-----cccccccCCCCCCcccchHHHHHH
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSL-SS--SSGPKI-----MLINVLDQRLSPPVNQKIVQDIIL 503 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~-~~--~~~~~~-----~~~~~~d~~l~~~~~~~~~~~~~~ 503 (526)
..||.......+.++||||||++++|++||+.|....... .. ...+.. ...+.+......+. .......
T Consensus 184 ~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 260 (295)
T 3ugc_A 184 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPR---PDGCPDE 260 (295)
T ss_dssp CCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCC---CTTCCHH
T ss_pred eCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhccCcCCC---CcCcCHH
Confidence 4577777777889999999999999999999985432110 00 000000 01111111111111 1112234
Q ss_pred HHHHHHhcCCCCCCCCCCccccC
Q 009771 504 VSTIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 504 ~~~la~~C~~~~p~~RP~m~~v~ 526 (526)
+.++...|++.+|++||+|.||+
T Consensus 261 l~~li~~~l~~dp~~Rps~~el~ 283 (295)
T 3ugc_A 261 IYMIMTECWNNNVNQRPSFRDLA 283 (295)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHH
T ss_pred HHHHHHHHcCCChhhCCCHHHHH
Confidence 66788899999999999999873
No 188
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=97.94 E-value=1.2e-07 Score=90.94 Aligned_cols=90 Identities=12% Similarity=0.055 Sum_probs=54.6
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++||||||++++|++||+.|........ .......+.......+...........+.++...|
T Consensus 185 ~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 260 (298)
T 1csn_A 185 MSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAAT----NKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYA 260 (298)
T ss_dssp CCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCC----HHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHH
T ss_pred CCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccc----cHHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHH
Confidence 45787777778999999999999999999999954321100 00001111110000000000001123466788899
Q ss_pred CCCCCCCCCCcccc
Q 009771 512 LSSQPKSRPTMQRI 525 (526)
Q Consensus 512 ~~~~p~~RP~m~~v 525 (526)
++.+|++||++.+|
T Consensus 261 l~~dp~~RP~~~~l 274 (298)
T 1csn_A 261 RNLAFDATPDYDYL 274 (298)
T ss_dssp HHCCTTCCCCHHHH
T ss_pred hcCCcccCCCHHHH
Confidence 99999999999886
No 189
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=97.94 E-value=8e-07 Score=88.98 Aligned_cols=77 Identities=18% Similarity=0.286 Sum_probs=49.4
Q ss_pred cccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhcCCCCCCCCC
Q 009771 441 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 520 (526)
Q Consensus 441 ~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 520 (526)
..+.++|||||||+++|++||+.|....... ...+..++++........... ..+.++...|++.+|++||
T Consensus 243 ~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~------~~~~~~~~~~~~~~~~~~~~~---~~~~~li~~~L~~dP~~Rp 313 (390)
T 2zmd_A 243 KISPKSDVWSLGCILYYMTYGKTPFQQIINQ------ISKLHAIIDPNHEIEFPDIPE---KDLQDVLKCCLKRDPKQRI 313 (390)
T ss_dssp -CCHHHHHHHHHHHHHHHHHSSCTTTTCCCH------HHHHHHHHCTTSCCCCCCCSC---HHHHHHHHHHTCSSTTTSC
T ss_pred CCCChhhHHHHHHHHHHHHHCCCcchhhhHH------HHHHHHHhCccccCCCCccch---HHHHHHHHHHcccChhhCC
Confidence 5788999999999999999999996432110 001223333332211111111 2355778899999999999
Q ss_pred CccccC
Q 009771 521 TMQRIS 526 (526)
Q Consensus 521 ~m~~v~ 526 (526)
+|.||+
T Consensus 314 s~~ell 319 (390)
T 2zmd_A 314 SIPELL 319 (390)
T ss_dssp CHHHHH
T ss_pred CHHHHh
Confidence 999873
No 190
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=97.94 E-value=3e-07 Score=91.64 Aligned_cols=85 Identities=20% Similarity=0.230 Sum_probs=55.8
Q ss_pred CCCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHH
Q 009771 431 SLNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 431 ~l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
...||.......+.++|||||||+++|++| |+.|....... ...+.+......+.... +...+.++..
T Consensus 281 y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~~---~~~~l~~li~ 349 (377)
T 3cbl_A 281 WTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ--------QTREFVEKGGRLPCPEL---CPDAVFRLME 349 (377)
T ss_dssp GSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH--------HHHHHHHTTCCCCCCTT---CCHHHHHHHH
T ss_pred cCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCCCCCCCCC---CCHHHHHHHH
Confidence 356888777788999999999999999998 99885432110 11111211111111011 1234567788
Q ss_pred hcCCCCCCCCCCccccC
Q 009771 510 ACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v~ 526 (526)
.|++.+|++||+|.||+
T Consensus 350 ~cl~~dP~~Rps~~~i~ 366 (377)
T 3cbl_A 350 QCWAYEPGQRPSFSTIY 366 (377)
T ss_dssp HHTCSSGGGSCCHHHHH
T ss_pred HHcCCCchhCcCHHHHH
Confidence 99999999999999863
No 191
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=97.92 E-value=1.1e-06 Score=85.94 Aligned_cols=95 Identities=16% Similarity=0.272 Sum_probs=53.6
Q ss_pred CCchhcccccccc------cccccccceeeeehhcCCCCCccccc----cccccCCCc---cccccc-cCCCCCCc--cc
Q 009771 432 LNGKLAHTMVVTE------KCDVYSFGVVALEILMGRHPGELLSS----LSSSSGPKI---MLINVL-DQRLSPPV--NQ 495 (526)
Q Consensus 432 l~~~~~~~~~~~~------k~dvysfGv~llElltg~~P~~~~~~----~~~~~~~~~---~~~~~~-d~~l~~~~--~~ 495 (526)
..||......... ++|||||||+++|++||+.|...... |........ ...+.+ .....+.. ..
T Consensus 213 ~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (337)
T 3mdy_A 213 MPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRW 292 (337)
T ss_dssp CCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGG
T ss_pred eChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhccCccccccc
Confidence 3466554443333 48999999999999999665432111 100000000 011111 11111111 01
Q ss_pred chHHHHHHHHHHHHhcCCCCCCCCCCccccC
Q 009771 496 KIVQDIILVSTIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 496 ~~~~~~~~~~~la~~C~~~~p~~RP~m~~v~ 526 (526)
...++...+.++...|++.+|++||++.||+
T Consensus 293 ~~~~~~~~l~~li~~~l~~dP~~Rps~~ell 323 (337)
T 3mdy_A 293 SSDECLRQMGKLMTECWAHNPASRLTALRVK 323 (337)
T ss_dssp GGSHHHHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred hhhHHHHHHHHHHHHhhhhChhhCCCHHHHH
Confidence 1235566788999999999999999999873
No 192
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=97.92 E-value=4.3e-07 Score=86.84 Aligned_cols=88 Identities=22% Similarity=0.385 Sum_probs=52.4
Q ss_pred CCchhcc---cccccccccccccceeeeehhcCCCCCccccccccccCCCcccccccc-CCCCCCcccchHHHHHHHHHH
Q 009771 432 LNGKLAH---TMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLD-QRLSPPVNQKIVQDIILVSTI 507 (526)
Q Consensus 432 l~~~~~~---~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d-~~l~~~~~~~~~~~~~~~~~l 507 (526)
..||... ....+.++||||||++++|++||+.|....... ..+.+.+. ....+............+.++
T Consensus 189 ~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 261 (289)
T 3og7_A 189 MAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR-------DQIIEMVGRGSLSPDLSKVRSNCPKRMKRL 261 (289)
T ss_dssp CCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCH-------HHHHHHHHHTSCCCCTTSSCTTSCHHHHHH
T ss_pred cCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchH-------HHHHHHhcccccCcchhhccccCCHHHHHH
Confidence 4566553 445677999999999999999999995431110 00111111 111110000011122446678
Q ss_pred HHhcCCCCCCCCCCccccC
Q 009771 508 AFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 508 a~~C~~~~p~~RP~m~~v~ 526 (526)
...|++.+|++||++.||+
T Consensus 262 i~~~l~~~p~~Rps~~ell 280 (289)
T 3og7_A 262 MAECLKKKRDERPSFPRIL 280 (289)
T ss_dssp HHHHTCSSGGGSCCHHHHH
T ss_pred HHHHccCChhhCCCHHHHH
Confidence 8899999999999998863
No 193
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=97.92 E-value=3.4e-07 Score=89.24 Aligned_cols=85 Identities=20% Similarity=0.296 Sum_probs=55.4
Q ss_pred CCCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHH
Q 009771 431 SLNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 431 ~l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
...||.......+.++||||||++++|++| |+.|....... .+.+.+......+... .....+.++..
T Consensus 220 y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~---~~~~~l~~li~ 288 (325)
T 3kul_A 220 WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR--------DVISSVEEGYRLPAPM---GCPHALHQLML 288 (325)
T ss_dssp GSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH--------HHHHHHHTTCCCCCCT---TCCHHHHHHHH
T ss_pred ccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH--------HHHHHHHcCCCCCCCC---CcCHHHHHHHH
Confidence 356887777788899999999999999999 99985321110 0111111111111101 11234567889
Q ss_pred hcCCCCCCCCCCccccC
Q 009771 510 ACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v~ 526 (526)
.|++.+|++||+|.||+
T Consensus 289 ~~l~~dp~~Rps~~eil 305 (325)
T 3kul_A 289 DCWHKDRAQRPRFSQIV 305 (325)
T ss_dssp HHTCSSGGGSCCHHHHH
T ss_pred HHccCChhhCcCHHHHH
Confidence 99999999999999873
No 194
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=97.92 E-value=1.1e-06 Score=83.46 Aligned_cols=83 Identities=20% Similarity=0.287 Sum_probs=44.0
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++||||||++++|++||+.|...... ......+.......+ ... -..+.++...|
T Consensus 179 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~~~~~~~--~~~---~~~~~~li~~~ 246 (278)
T 3cok_A 179 ISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTV-------KNTLNKVVLADYEMP--SFL---SIEAKDLIHQL 246 (278)
T ss_dssp -------------CTHHHHHHHHHHHHHHSSCSSCCCSC-------C-----CCSSCCCCC--TTS---CHHHHHHHHHH
T ss_pred CCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhH-------HHHHHHHhhcccCCc--ccc---CHHHHHHHHHH
Confidence 346666666678899999999999999999999542110 000111111111111 111 12355778899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|++||++.||+
T Consensus 247 l~~dp~~Rps~~~~l 261 (278)
T 3cok_A 247 LRRNPADRLSLSSVL 261 (278)
T ss_dssp SCSSGGGSCCHHHHT
T ss_pred cccCHhhCCCHHHHh
Confidence 999999999999874
No 195
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=97.90 E-value=6.3e-07 Score=95.19 Aligned_cols=84 Identities=15% Similarity=0.200 Sum_probs=56.3
Q ss_pred CCCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHH
Q 009771 431 SLNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 431 ~l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
...||.......+.++|||||||+++|++| |+.|....... .+.+.+........ ...+...+.++..
T Consensus 505 y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--------~~~~~i~~~~~~~~---p~~~~~~l~~li~ 573 (613)
T 2ozo_A 505 WYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--------EVMAFIEQGKRMEC---PPECPPELYALMS 573 (613)
T ss_dssp TSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH--------HHHHHHHTTCCCCC---CTTCCHHHHHHHH
T ss_pred eeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH--------HHHHHHHcCCCCCC---CCcCCHHHHHHHH
Confidence 456888877788999999999999999998 99995431110 11111111111000 1112345667889
Q ss_pred hcCCCCCCCCCCcccc
Q 009771 510 ACLSSQPKSRPTMQRI 525 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v 525 (526)
.|++.+|++||+|.+|
T Consensus 574 ~cl~~dP~~RPs~~~l 589 (613)
T 2ozo_A 574 DCWIYKWEDRPDFLTV 589 (613)
T ss_dssp HTTCSSTTTSCCHHHH
T ss_pred HHcCCChhHCcCHHHH
Confidence 9999999999999886
No 196
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.90 E-value=6.1e-06 Score=71.61 Aligned_cols=83 Identities=17% Similarity=0.085 Sum_probs=49.6
Q ss_pred cccEEECCCCcCCCCCcccccCCCCCCeecCcCC-cCcccCcccccCC----CCCCEEecCCCc-CcccchHHhhcCcCC
Q 009771 325 SLQILDLSSNQLHSSIPLVIGNFSALSYLDLSDN-RICGIIPDELTKL----SHLKYLNLSSNL-LSGQIPFAIGKLFNL 398 (526)
Q Consensus 325 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n-~l~~~~~~~~~~l----~~L~~L~L~~n~-l~~~~~~~~~~~~~L 398 (526)
.|+.||++++.++...-..+..+++|++|+|++| .+++..-..+..+ ++|++|+|++|. +|+..-..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 4555555555554433344456666667777666 3555444444443 357777777764 666555566677777
Q ss_pred CEEEccCCc
Q 009771 399 ASLDLSKNK 407 (526)
Q Consensus 399 ~~L~l~~n~ 407 (526)
++|+++++.
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 777777764
No 197
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=97.90 E-value=5.8e-07 Score=89.32 Aligned_cols=84 Identities=23% Similarity=0.329 Sum_probs=54.4
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++|||||||+++|++| |+.|...... . .+...+........ .......+.++...
T Consensus 272 ~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~-------~-~~~~~~~~~~~~~~---~~~~~~~l~~li~~ 340 (370)
T 2psq_A 272 MAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV-------E-ELFKLLKEGHRMDK---PANCTNELYMMMRD 340 (370)
T ss_dssp CCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG-------G-GHHHHHHTTCCCCC---CTTSCHHHHHHHHH
T ss_pred ECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCH-------H-HHHHHHhcCCCCCC---CCCCCHHHHHHHHH
Confidence 56787777778999999999999999999 8888542110 0 11111111111111 01112345577889
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||++.|++
T Consensus 341 ~l~~dP~~Rpt~~ell 356 (370)
T 2psq_A 341 CWHAVPSQRPTFKQLV 356 (370)
T ss_dssp HTCSSGGGSCCHHHHH
T ss_pred HcCCChhhCcCHHHHH
Confidence 9999999999999873
No 198
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=97.89 E-value=1.2e-06 Score=84.85 Aligned_cols=78 Identities=18% Similarity=0.276 Sum_probs=49.0
Q ss_pred ccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhcCCCCCCCC
Q 009771 440 MVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 519 (526)
Q Consensus 440 ~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 519 (526)
...+.++||||||++++|++||+.|....... ......++++........... ..+.++...|++.+|++|
T Consensus 214 ~~~~~~~Di~slG~il~el~~g~~pf~~~~~~------~~~~~~~~~~~~~~~~~~~~~---~~l~~li~~~l~~dp~~R 284 (313)
T 3cek_A 214 SKISPKSDVWSLGCILYYMTYGKTPFQQIINQ------ISKLHAIIDPNHEIEFPDIPE---KDLQDVLKCCLKRDPKQR 284 (313)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSH------HHHHHHHHCTTSCCCCCCCSC---HHHHHHHHHHTCSSTTTS
T ss_pred ccCCchHHHHHHHHHHHHHHhCCCchhhHHHH------HHHHHHHHhcccccCCcccch---HHHHHHHHHHccCCcccC
Confidence 35778999999999999999999995422110 001222333322211111111 234567789999999999
Q ss_pred CCccccC
Q 009771 520 PTMQRIS 526 (526)
Q Consensus 520 P~m~~v~ 526 (526)
|++.||+
T Consensus 285 ps~~ell 291 (313)
T 3cek_A 285 ISIPELL 291 (313)
T ss_dssp CCHHHHH
T ss_pred cCHHHHh
Confidence 9999873
No 199
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=97.89 E-value=5.5e-07 Score=92.03 Aligned_cols=84 Identities=20% Similarity=0.245 Sum_probs=55.3
Q ss_pred CCCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHH
Q 009771 431 SLNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 431 ~l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
...||.......+.++|||||||+++|++| |+.|...... . .+...+........ ...+...+.++..
T Consensus 352 y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~-------~-~~~~~i~~~~~~~~---p~~~~~~l~~li~ 420 (450)
T 1k9a_A 352 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-------K-DVVPRVEKGYKMDA---PDGCPPAVYDVMK 420 (450)
T ss_dssp TSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCT-------T-THHHHHHTTCCCCC---CTTCCHHHHHHHH
T ss_pred eeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH-------H-HHHHHHHcCCCCCC---CCcCCHHHHHHHH
Confidence 456888877788999999999999999998 9998542110 0 01111111111110 0112234557778
Q ss_pred hcCCCCCCCCCCcccc
Q 009771 510 ACLSSQPKSRPTMQRI 525 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v 525 (526)
.|++.+|.+||+|.|+
T Consensus 421 ~cl~~dp~~Rpt~~~l 436 (450)
T 1k9a_A 421 NCWHLDAATRPTFLQL 436 (450)
T ss_dssp HHTCSSGGGSCCHHHH
T ss_pred HHcCCChhHCcCHHHH
Confidence 9999999999999886
No 200
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=97.89 E-value=9.1e-07 Score=86.04 Aligned_cols=86 Identities=17% Similarity=0.274 Sum_probs=53.9
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|||||||+++|++||+.|........ .. ..+.+...+.+... ..... .+.++...|
T Consensus 208 ~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~--~~--~~~~~~~~~~~~~~--~~~~~---~l~~li~~~ 278 (321)
T 2c30_A 208 MAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQ--AM--KRLRDSPPPKLKNS--HKVSP---VLRDFLERM 278 (321)
T ss_dssp CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HH--HHHHHSSCCCCTTG--GGSCH---HHHHHHHHH
T ss_pred cCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HH--HHHhcCCCCCcCcc--ccCCH---HHHHHHHHH
Confidence 45787777778899999999999999999999954211000 00 00111111111110 11112 344667799
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|++||+|.||+
T Consensus 279 l~~dp~~Rps~~ell 293 (321)
T 2c30_A 279 LVRDPQERATAQELL 293 (321)
T ss_dssp SCSSTTTSCCHHHHH
T ss_pred ccCChhhCcCHHHHh
Confidence 999999999999873
No 201
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=97.89 E-value=9.3e-07 Score=85.40 Aligned_cols=85 Identities=21% Similarity=0.310 Sum_probs=54.8
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++||||||++++|+++|+.|........ ...........+....+.. ...+.++...|
T Consensus 189 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-------~~~l~~li~~~ 259 (310)
T 3s95_A 189 MAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRT--MDFGLNVRGFLDRYCPPNC-------PPSFFPITVRC 259 (310)
T ss_dssp CCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBC--TTSSBCHHHHHHHTCCTTC-------CTTHHHHHHHH
T ss_pred eCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhH--HHHhhhhhccccccCCCCC-------CHHHHHHHHHH
Confidence 45787777778899999999999999999998854211110 0001111122222221111 12355778899
Q ss_pred CCCCCCCCCCcccc
Q 009771 512 LSSQPKSRPTMQRI 525 (526)
Q Consensus 512 ~~~~p~~RP~m~~v 525 (526)
++.+|++||+|.||
T Consensus 260 l~~dP~~Rps~~~l 273 (310)
T 3s95_A 260 CDLDPEKRPSFVKL 273 (310)
T ss_dssp TCSSGGGSCCHHHH
T ss_pred ccCChhhCcCHHHH
Confidence 99999999999886
No 202
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=97.88 E-value=1.1e-06 Score=83.62 Aligned_cols=87 Identities=15% Similarity=0.137 Sum_probs=53.5
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++||||||++++|+++|+.|....... .....+.......+. ......-..+.++...|
T Consensus 174 ~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-------~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~ 245 (284)
T 3kk8_A 174 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH-------RLYAQIKAGAYDYPS-PEWDTVTPEAKSLIDSM 245 (284)
T ss_dssp CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHTCCCCCT-TTTTTSCHHHHHHHHHH
T ss_pred cCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh-------HHHHHHHhccccCCc-hhhcccCHHHHHHHHHH
Confidence 4577777777889999999999999999999995321100 001111111110000 00000112345677899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|++||++.|++
T Consensus 246 l~~dp~~Rps~~~~l 260 (284)
T 3kk8_A 246 LTVNPKKRITADQAL 260 (284)
T ss_dssp SCSSTTTSCCHHHHT
T ss_pred cccChhhCCCHHHHh
Confidence 999999999999874
No 203
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=97.88 E-value=4.5e-07 Score=85.69 Aligned_cols=85 Identities=22% Similarity=0.404 Sum_probs=54.5
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++||||||++++|++||+.|........ ....+.......+.... ....+.++...|
T Consensus 181 ~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-------~~~~~~~~~~~~~~~~~---~~~~~~~li~~~ 250 (271)
T 3dtc_A 181 MAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLA-------VAYGVAMNKLALPIPST---CPEPFAKLMEDC 250 (271)
T ss_dssp SCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHH-------HHHHHHTSCCCCCCCTT---CCHHHHHHHHHH
T ss_pred eCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-------HHHhhhcCCCCCCCCcc---cCHHHHHHHHHH
Confidence 45777777778899999999999999999999954321110 01111111111111011 123455778899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|.+||++.||+
T Consensus 251 l~~~p~~Rps~~e~l 265 (271)
T 3dtc_A 251 WNPDPHSRPSFTNIL 265 (271)
T ss_dssp TCSSGGGSCCHHHHH
T ss_pred hcCCcccCcCHHHHH
Confidence 999999999999873
No 204
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=97.88 E-value=4.4e-07 Score=89.96 Aligned_cols=87 Identities=9% Similarity=0.031 Sum_probs=55.7
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCcccccc---c---cccCCCccccccccCCCCCCcccchHHHHHHHH
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSL---S---SSSGPKIMLINVLDQRLSPPVNQKIVQDIILVS 505 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~---~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ 505 (526)
..||.......+.++|||||||+++|++||+.|....... . ..... ..+.+++++.+... .. ...+.
T Consensus 228 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~---~~~~~ 300 (364)
T 3op5_A 228 TSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYR-ENIASLMDKCFPAA---NA---PGEIA 300 (364)
T ss_dssp CCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHH-HCHHHHHHHHSCTT---CC---CHHHH
T ss_pred cCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHHHHHHhh-hhHHHHHHHhcccc---cC---HHHHH
Confidence 4588877777899999999999999999999996521100 0 00000 00122233322111 01 23456
Q ss_pred HHHHhcCCCCCCCCCCcccc
Q 009771 506 TIAFACLSSQPKSRPTMQRI 525 (526)
Q Consensus 506 ~la~~C~~~~p~~RP~m~~v 525 (526)
++...|++.+|++||+|.++
T Consensus 301 ~li~~cl~~~p~~RP~~~~l 320 (364)
T 3op5_A 301 KYMETVKLLDYTEKPLYENL 320 (364)
T ss_dssp HHHHHHHTCCTTCCCCHHHH
T ss_pred HHHHHHhcCCCCCCCCHHHH
Confidence 77889999999999999876
No 205
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=97.87 E-value=1e-06 Score=84.70 Aligned_cols=86 Identities=17% Similarity=0.308 Sum_probs=53.6
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|||||||+++|++||+.|......... . ..+.....+....+ ... -..+.++...|
T Consensus 183 ~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~--~--~~~~~~~~~~~~~~--~~~---~~~~~~li~~~ 253 (297)
T 3fxz_A 183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA--L--YLIATNGTPELQNP--EKL---SAIFRDFLNRC 253 (297)
T ss_dssp CCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH--H--HHHHHHCSCCCSCG--GGS---CHHHHHHHHHH
T ss_pred cChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--H--HHHHhCCCCCCCCc--ccc---CHHHHHHHHHH
Confidence 457777777788999999999999999999999532111000 0 00000001111111 111 12345677899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|++||++.|++
T Consensus 254 l~~dp~~Rps~~ell 268 (297)
T 3fxz_A 254 LEMDVEKRGSAKELL 268 (297)
T ss_dssp SCSSTTTSCCHHHHT
T ss_pred ccCChhHCcCHHHHh
Confidence 999999999999874
No 206
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=97.87 E-value=5.9e-07 Score=92.92 Aligned_cols=84 Identities=21% Similarity=0.229 Sum_probs=55.4
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++|||||||+++|++| |+.|...... ..+.+.+........ ...+...+.++...
T Consensus 386 ~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~--------~~~~~~~~~~~~~~~---~~~~~~~l~~li~~ 454 (495)
T 1opk_A 386 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--------SQVYELLEKDYRMER---PEGCPEKVYELMRA 454 (495)
T ss_dssp CCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG--------GGHHHHHHTTCCCCC---CTTCCHHHHHHHHH
T ss_pred eCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHcCCCCCC---CCCCCHHHHHHHHH
Confidence 45787777778999999999999999999 8888542110 011122222211111 11122345677889
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||+|.||+
T Consensus 455 cl~~dP~~RPs~~el~ 470 (495)
T 1opk_A 455 CWQWNPSDRPSFAEIH 470 (495)
T ss_dssp HTCSSGGGSCCHHHHH
T ss_pred HcCcChhHCcCHHHHH
Confidence 9999999999999863
No 207
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=97.87 E-value=5.3e-07 Score=92.16 Aligned_cols=83 Identities=22% Similarity=0.322 Sum_probs=54.2
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++|||||||+++|++| |+.|....... .+.+.+......+. ...+...+.++...
T Consensus 348 ~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~--------~~~~~i~~~~~~~~---~~~~~~~l~~li~~ 416 (452)
T 1fmk_A 348 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--------EVLDQVERGYRMPC---PPECPESLHDLMCQ 416 (452)
T ss_dssp SCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--------HHHHHHHTTCCCCC---CTTSCHHHHHHHHH
T ss_pred cCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCCCCCC---CCCCCHHHHHHHHH
Confidence 45787777788999999999999999999 89885421100 01111111111110 01122345677889
Q ss_pred cCCCCCCCCCCcccc
Q 009771 511 CLSSQPKSRPTMQRI 525 (526)
Q Consensus 511 C~~~~p~~RP~m~~v 525 (526)
|++.+|++||+|.+|
T Consensus 417 cl~~dP~~Rpt~~~l 431 (452)
T 1fmk_A 417 CWRKEPEERPTFEYL 431 (452)
T ss_dssp HTCSSGGGSCCHHHH
T ss_pred HccCChhhCcCHHHH
Confidence 999999999999886
No 208
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=97.86 E-value=5.5e-07 Score=89.40 Aligned_cols=84 Identities=24% Similarity=0.255 Sum_probs=54.2
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++|||||||+++|++| |+.|...... ..+.+.+.......... .....+.++...
T Consensus 253 ~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~--------~~~~~~i~~~~~~~~~~---~~~~~l~~li~~ 321 (367)
T 3l9p_A 253 MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--------QEVLEFVTSGGRMDPPK---NCPGPVYRIMTQ 321 (367)
T ss_dssp CCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--------HHHHHHHHTTCCCCCCT---TCCHHHHHHHHH
T ss_pred ECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHcCCCCCCCc---cCCHHHHHHHHH
Confidence 45787767778999999999999999998 8888542110 00111111111100001 112345678899
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||++.||+
T Consensus 322 ~l~~dP~~Rps~~eil 337 (367)
T 3l9p_A 322 CWQHQPEDRPNFAIIL 337 (367)
T ss_dssp HTCSSGGGSCCHHHHH
T ss_pred HcCCCHhHCcCHHHHH
Confidence 9999999999999873
No 209
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=97.85 E-value=7.1e-07 Score=88.17 Aligned_cols=86 Identities=21% Similarity=0.269 Sum_probs=54.6
Q ss_pred CCCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHH
Q 009771 431 SLNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 431 ~l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
...||.......+.++|||||||+++|++| |+.|..... ... .....+............ -..+.++..
T Consensus 261 y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~------~~~-~~~~~~~~~~~~~~~~~~---~~~l~~li~ 330 (359)
T 3vhe_A 261 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK------IDE-EFCRRLKEGTRMRAPDYT---TPEMYQTML 330 (359)
T ss_dssp GCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC------CSH-HHHHHHHHTCCCCCCTTC---CHHHHHHHH
T ss_pred eEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccc------hhH-HHHHHHHcCCCCCCCCCC---CHHHHHHHH
Confidence 356887777788999999999999999999 999853211 000 111111111110000111 123556778
Q ss_pred hcCCCCCCCCCCccccC
Q 009771 510 ACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v~ 526 (526)
.|++.+|++||+|.||+
T Consensus 331 ~~l~~dP~~Rps~~ell 347 (359)
T 3vhe_A 331 DCWHGEPSQRPTFSELV 347 (359)
T ss_dssp HHTCSSGGGSCCHHHHH
T ss_pred HHccCChhhCCCHHHHH
Confidence 99999999999999873
No 210
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=97.84 E-value=1.2e-06 Score=83.58 Aligned_cols=86 Identities=20% Similarity=0.307 Sum_probs=52.1
Q ss_pred CCchhc----ccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHH
Q 009771 432 LNGKLA----HTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTI 507 (526)
Q Consensus 432 l~~~~~----~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l 507 (526)
..||.. .....+.++||||||++++|++||+.|...... +.......+............ -..+.++
T Consensus 176 ~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~~~~~~~~---~~~~~~l 246 (290)
T 3fme_A 176 MAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT------PFQQLKQVVEEPSPQLPADKF---SAEFVDF 246 (290)
T ss_dssp SCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSC------HHHHHHHHHHSCCCCCCTTTS---CHHHHHH
T ss_pred cChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCc------hHHHHHHHhccCCCCcccccC---CHHHHHH
Confidence 456663 445678899999999999999999999642110 000111122211111100111 1235577
Q ss_pred HHhcCCCCCCCCCCccccC
Q 009771 508 AFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 508 a~~C~~~~p~~RP~m~~v~ 526 (526)
...|++.+|++||++.||+
T Consensus 247 i~~~l~~~p~~Rpt~~e~l 265 (290)
T 3fme_A 247 TSQCLKKNSKERPTYPELM 265 (290)
T ss_dssp HHHHTCSSGGGSCCHHHHT
T ss_pred HHHHhhcChhhCcCHHHHH
Confidence 8899999999999999875
No 211
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=97.84 E-value=5.1e-07 Score=88.81 Aligned_cols=92 Identities=15% Similarity=0.106 Sum_probs=54.1
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCccc--chHHHHHHHHHHHH
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQ--KIVQDIILVSTIAF 509 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~--~~~~~~~~~~~la~ 509 (526)
..||.......+.++|||||||+++|++||+.|.......... . . .........+...... ........+.++..
T Consensus 227 ~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~-~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 303 (345)
T 2v62_A 227 TSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVA-V-Q-TAKTNLLDELPQSVLKWAPSGSSCCEIAQFLV 303 (345)
T ss_dssp CCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHH-H-H-HHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHH
T ss_pred cCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHH-H-H-HHHHhhcccccHHHHhhccccccHHHHHHHHH
Confidence 4688877777899999999999999999999996321000000 0 0 0000011111000000 00011224567778
Q ss_pred hcCCCCCCCCCCccccC
Q 009771 510 ACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v~ 526 (526)
.|++.+|++||+|.+|+
T Consensus 304 ~~l~~dp~~Rps~~~l~ 320 (345)
T 2v62_A 304 CAHSLAYDEKPNYQALK 320 (345)
T ss_dssp HHHTCCTTCCCCHHHHH
T ss_pred HHhhcCcccCCCHHHHH
Confidence 99999999999998863
No 212
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=97.84 E-value=1.1e-06 Score=85.98 Aligned_cols=85 Identities=20% Similarity=0.290 Sum_probs=49.3
Q ss_pred ccccccccccceeeeehhcCCCCCcccc----ccccccCCCc---ccc-ccccCCCCCCccc--chHHHHHHHHHHHHhc
Q 009771 442 VTEKCDVYSFGVVALEILMGRHPGELLS----SLSSSSGPKI---MLI-NVLDQRLSPPVNQ--KIVQDIILVSTIAFAC 511 (526)
Q Consensus 442 ~~~k~dvysfGv~llElltg~~P~~~~~----~~~~~~~~~~---~~~-~~~d~~l~~~~~~--~~~~~~~~~~~la~~C 511 (526)
.+.++|||||||+++|++||+.++.... .|......+. .+. .+......+.... ...++...+.++...|
T Consensus 234 ~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 313 (342)
T 1b6c_B 234 SFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMREC 313 (342)
T ss_dssp HHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHH
T ss_pred cCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHH
Confidence 4478999999999999999954321100 0100000000 011 1122222221111 1235567788999999
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|++||+|.||+
T Consensus 314 l~~dp~~Rps~~~i~ 328 (342)
T 1b6c_B 314 WYANGAARLTALRIK 328 (342)
T ss_dssp CCSSGGGSCCHHHHH
T ss_pred hccChhhCCCHHHHH
Confidence 999999999999873
No 213
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=97.84 E-value=8.3e-07 Score=86.81 Aligned_cols=83 Identities=24% Similarity=0.364 Sum_probs=54.0
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccC-CCCCCcccchHHHHHHHHHHHH
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQ-RLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~-~l~~~~~~~~~~~~~~~~~la~ 509 (526)
..||.......+.++||||||++++|++| |+.|...... ......+.+. +...+ . .....+.++..
T Consensus 217 ~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~-------~~~~~~~~~~~~~~~~--~---~~~~~l~~li~ 284 (333)
T 1mqb_A 217 TAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN-------HEVMKAINDGFRLPTP--M---DCPSAIYQLMM 284 (333)
T ss_dssp SCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-------HHHHHHHHTTCCCCCC--T---TCBHHHHHHHH
T ss_pred cCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH-------HHHHHHHHCCCcCCCc--c---cCCHHHHHHHH
Confidence 45777776778899999999999999999 9998532110 0001111111 11111 1 11234567889
Q ss_pred hcCCCCCCCCCCccccC
Q 009771 510 ACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v~ 526 (526)
.|++.+|++||+|.||+
T Consensus 285 ~~l~~~p~~Rps~~~l~ 301 (333)
T 1mqb_A 285 QCWQQERARRPKFADIV 301 (333)
T ss_dssp HHTCSSTTTSCCHHHHH
T ss_pred HHcCCChhhCcCHHHHH
Confidence 99999999999998863
No 214
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=97.84 E-value=1.1e-06 Score=85.74 Aligned_cols=87 Identities=16% Similarity=0.193 Sum_probs=54.0
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++||||||++++|++||+.|....... .....+......... ......-..+.++...|
T Consensus 200 ~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-------~~~~~i~~~~~~~~~-~~~~~~~~~~~~li~~~ 271 (327)
T 3lm5_A 200 LAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQ-------ETYLNISQVNVDYSE-ETFSSVSQLATDFIQSL 271 (327)
T ss_dssp CCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHTCCCCCT-TTTTTSCHHHHHHHHHH
T ss_pred cCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch-------HHHHHHHhcccccCc-hhhcccCHHHHHHHHHH
Confidence 4577777777889999999999999999999995321100 001111111110000 00011122355678899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|++||++.|++
T Consensus 272 L~~dP~~Rpt~~~ll 286 (327)
T 3lm5_A 272 LVKNPEKRPTAEICL 286 (327)
T ss_dssp SCSSGGGSCCHHHHT
T ss_pred cCCChhhCcCHHHHh
Confidence 999999999999874
No 215
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=97.83 E-value=5.7e-07 Score=89.78 Aligned_cols=84 Identities=21% Similarity=0.314 Sum_probs=54.4
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++|||||||+++|++| |+.|...... ..+.+.+........... ....+.++...
T Consensus 260 ~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~---~~~~l~~li~~ 328 (382)
T 3tt0_A 260 MAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV--------EELFKLLKEGHRMDKPSN---CTNELYMMMRD 328 (382)
T ss_dssp SCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--------HHHHHHHHTTCCCCCCSS---CCHHHHHHHHH
T ss_pred eCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHcCCCCCCCcc---CCHHHHHHHHH
Confidence 45787777778999999999999999999 9988542110 001111111111100011 12345577889
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||+|.||+
T Consensus 329 ~l~~dP~~Rps~~ell 344 (382)
T 3tt0_A 329 CWHAVPSQRPTFKQLV 344 (382)
T ss_dssp HTCSSGGGSCCHHHHH
T ss_pred HcCCChhhCcCHHHHH
Confidence 9999999999999873
No 216
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=97.83 E-value=8.2e-07 Score=86.31 Aligned_cols=83 Identities=22% Similarity=0.338 Sum_probs=53.5
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++||||||++++|++| |+.|...... ......+......... . .....+.++...
T Consensus 206 ~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~-------~~~~~~~~~~~~~~~~-~---~~~~~l~~li~~ 274 (323)
T 3qup_A 206 LALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN-------AEIYNYLIGGNRLKQP-P---ECMEEVYDLMYQ 274 (323)
T ss_dssp CCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG-------GGHHHHHHTTCCCCCC-T---TCCHHHHHHHHH
T ss_pred cCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccCh-------HHHHHHHhcCCCCCCC-C---ccCHHHHHHHHH
Confidence 45777766778899999999999999999 8888542111 0001111111111100 1 112346678899
Q ss_pred cCCCCCCCCCCcccc
Q 009771 511 CLSSQPKSRPTMQRI 525 (526)
Q Consensus 511 C~~~~p~~RP~m~~v 525 (526)
|++.+|++||++.|+
T Consensus 275 ~l~~dp~~Rps~~~l 289 (323)
T 3qup_A 275 CWSADPKQRPSFTCL 289 (323)
T ss_dssp TTCSSGGGSCCHHHH
T ss_pred HccCChhhCcCHHHH
Confidence 999999999998876
No 217
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=97.82 E-value=4.6e-07 Score=88.28 Aligned_cols=83 Identities=27% Similarity=0.384 Sum_probs=54.2
Q ss_pred CCCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccC--CCCCCcccchHHHHHHHHHH
Q 009771 431 SLNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQ--RLSPPVNQKIVQDIILVSTI 507 (526)
Q Consensus 431 ~l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~--~l~~~~~~~~~~~~~~~~~l 507 (526)
...||.......+.++||||||++++|++| |+.|...... . .+.+.+.. +...+ . .....+.++
T Consensus 183 y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-------~-~~~~~~~~~~~~~~~--~---~~~~~~~~l 249 (325)
T 3kex_A 183 WMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRL-------A-EVPDLLEKGERLAQP--Q---ICTIDVYMV 249 (325)
T ss_dssp TSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCT-------T-HHHHHHHTTCBCCCC--T---TBCTTTTHH
T ss_pred ccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCH-------H-HHHHHHHcCCCCCCC--C---cCcHHHHHH
Confidence 356888777788999999999999999999 9999542110 0 01111111 11100 0 011234567
Q ss_pred HHhcCCCCCCCCCCccccC
Q 009771 508 AFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 508 a~~C~~~~p~~RP~m~~v~ 526 (526)
...|++.+|.+||+|.||+
T Consensus 250 i~~~l~~dp~~Rps~~el~ 268 (325)
T 3kex_A 250 MVKCWMIDENIRPTFKELA 268 (325)
T ss_dssp HHHHTCSCTTTSCCHHHHH
T ss_pred HHHHcCCChhhCcCHHHHH
Confidence 8899999999999999863
No 218
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=97.82 E-value=9.5e-07 Score=87.00 Aligned_cols=87 Identities=14% Similarity=0.093 Sum_probs=53.8
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|||||||+++|++||+.|....... ......+......... ....+.-..+.++...|
T Consensus 217 ~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~------~~~~~~i~~~~~~~~~-~~~~~~~~~~~~li~~~ 289 (349)
T 2w4o_A 217 CAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD------QFMFRRILNCEYYFIS-PWWDEVSLNAKDLVRKL 289 (349)
T ss_dssp SCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCH------HHHHHHHHTTCCCCCT-TTTTTSCHHHHHHHHTT
T ss_pred cCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCccc------HHHHHHHHhCCCccCC-chhhhCCHHHHHHHHHH
Confidence 4578777777889999999999999999999995321100 0001111111111000 00001112355778899
Q ss_pred CCCCCCCCCCcccc
Q 009771 512 LSSQPKSRPTMQRI 525 (526)
Q Consensus 512 ~~~~p~~RP~m~~v 525 (526)
++.+|++||++.|+
T Consensus 290 L~~dP~~Rpt~~e~ 303 (349)
T 2w4o_A 290 IVLDPKKRLTTFQA 303 (349)
T ss_dssp SCSSGGGSCCHHHH
T ss_pred ccCChhhCcCHHHH
Confidence 99999999999886
No 219
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=97.82 E-value=1.4e-06 Score=85.39 Aligned_cols=87 Identities=21% Similarity=0.180 Sum_probs=53.1
Q ss_pred CCchhccc--ccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHH
Q 009771 432 LNGKLAHT--MVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 432 l~~~~~~~--~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
..||.... ...+.++||||||++++|++||+.|....... .....++........ ......-..+.++..
T Consensus 241 ~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-------~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~ 312 (345)
T 3hko_A 241 VAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDA-------DTISQVLNKKLCFEN-PNYNVLSPLARDLLS 312 (345)
T ss_dssp CCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHCCCCTTS-GGGGGSCHHHHHHHH
T ss_pred cCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChH-------HHHHHHHhcccccCC-cccccCCHHHHHHHH
Confidence 34666543 46778999999999999999999995421110 011222222221110 110011123456778
Q ss_pred hcCCCCCCCCCCccccC
Q 009771 510 ACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v~ 526 (526)
.|++.+|.+||++.|++
T Consensus 313 ~~l~~~p~~Rps~~~~l 329 (345)
T 3hko_A 313 NLLNRNVDERFDAMRAL 329 (345)
T ss_dssp HHSCSCTTTSCCHHHHH
T ss_pred HHcCCChhHCCCHHHHh
Confidence 99999999999998863
No 220
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=97.82 E-value=7.2e-07 Score=88.89 Aligned_cols=79 Identities=14% Similarity=0.006 Sum_probs=51.7
Q ss_pred CCchhcccc-----------cccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHH
Q 009771 432 LNGKLAHTM-----------VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQD 500 (526)
Q Consensus 432 l~~~~~~~~-----------~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 500 (526)
..||..... ..+.++|||||||+++|++||+.|....... .....+.. ... .. .
T Consensus 269 ~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~-------~~~~~~~~-~~~----~~-~-- 333 (377)
T 3byv_A 269 EPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAAL-------GGSEWIFR-SCK----NI-P-- 333 (377)
T ss_dssp CCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC-------------CCSGGGGS-SCC----CC-C--
T ss_pred cChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccc-------cchhhhhh-hcc----CC-C--
Confidence 457877665 7889999999999999999999995321110 00111111 110 11 1
Q ss_pred HHHHHHHHHhcCCCCCCCCCCccccC
Q 009771 501 IILVSTIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 501 ~~~~~~la~~C~~~~p~~RP~m~~v~ 526 (526)
..+.++...|++.+|++||++.||+
T Consensus 334 -~~~~~li~~~L~~dp~~Rpt~~e~l 358 (377)
T 3byv_A 334 -QPVRALLEGFLRYPKEDRLLPLQAM 358 (377)
T ss_dssp -HHHHHHHHHHTCSSGGGCCCHHHHH
T ss_pred -HHHHHHHHHHcCCCchhCCCHHHHh
Confidence 2345677899999999999999873
No 221
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=97.82 E-value=8.3e-07 Score=84.91 Aligned_cols=84 Identities=17% Similarity=0.224 Sum_probs=54.4
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++||||||++++|++| |+.|....... .+.+.+........... ....+.++...
T Consensus 187 ~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~~---~~~~l~~li~~ 255 (291)
T 1xbb_A 187 YAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--------EVTAMLEKGERMGCPAG---CPREMYDLMNL 255 (291)
T ss_dssp CCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--------HHHHHHHTTCCCCCCTT---CCHHHHHHHHH
T ss_pred eChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH--------HHHHHHHcCCCCCCCCC---CCHHHHHHHHH
Confidence 46787777778899999999999999999 99985431110 01111111111000011 12345677889
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||++.||+
T Consensus 256 ~l~~dp~~Rps~~~l~ 271 (291)
T 1xbb_A 256 CWTYDVENRPGFAAVE 271 (291)
T ss_dssp HTCSSTTTSCCHHHHH
T ss_pred HcCCChhhCcCHHHHH
Confidence 9999999999998863
No 222
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=97.81 E-value=9.9e-07 Score=85.31 Aligned_cols=84 Identities=24% Similarity=0.317 Sum_probs=53.3
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++||||||++++|++| |+.|...... ......+......... . .....+.++...
T Consensus 216 ~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-------~~~~~~~~~~~~~~~~-~---~~~~~l~~li~~ 284 (313)
T 3brb_A 216 IAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQN-------HEMYDYLLHGHRLKQP-E---DCLDELYEIMYS 284 (313)
T ss_dssp SCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG-------GGHHHHHHTTCCCCCB-T---TCCHHHHHHHHH
T ss_pred cCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCH-------HHHHHHHHcCCCCCCC-c---cccHHHHHHHHH
Confidence 45777777778899999999999999999 7777432111 0001111111111000 1 112345677889
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|.+||++.||+
T Consensus 285 ~l~~dp~~Rps~~~l~ 300 (313)
T 3brb_A 285 CWRTDPLDRPTFSVLR 300 (313)
T ss_dssp TTCSSGGGSCCHHHHH
T ss_pred HcCCChhhCcCHHHHH
Confidence 9999999999998863
No 223
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=97.81 E-value=1.7e-06 Score=84.71 Aligned_cols=86 Identities=20% Similarity=0.307 Sum_probs=52.8
Q ss_pred CCchhcc----cccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHH
Q 009771 432 LNGKLAH----TMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTI 507 (526)
Q Consensus 432 l~~~~~~----~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l 507 (526)
..||... ....+.++|||||||+++|++||+.|...... +...+..++............ -..+.++
T Consensus 220 ~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~------~~~~~~~~~~~~~~~~~~~~~---~~~~~~l 290 (340)
T 3an0_A 220 MAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT------PFQQLKQVVEEPSPQLPADKF---SAEFVDF 290 (340)
T ss_dssp CCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSC------HHHHHHHHHHSCCCCCCGGGS---CHHHHHH
T ss_pred cCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccc------hHHHHHHHhcCCCCCCCcccC---CHHHHHH
Confidence 4566632 33578899999999999999999999642110 000111122111111000111 2345677
Q ss_pred HHhcCCCCCCCCCCccccC
Q 009771 508 AFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 508 a~~C~~~~p~~RP~m~~v~ 526 (526)
...|++.+|++||++.||+
T Consensus 291 i~~~l~~dp~~Rps~~ell 309 (340)
T 3an0_A 291 TSQCLKKNSKERPTYPELM 309 (340)
T ss_dssp HHHHTCSSGGGSCCHHHHT
T ss_pred HHHHccCCcccCcCHHHHh
Confidence 8899999999999999875
No 224
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=97.81 E-value=8.7e-07 Score=84.53 Aligned_cols=86 Identities=27% Similarity=0.374 Sum_probs=52.7
Q ss_pred CCchhc--ccccccccccccccceeeeehhcCCCCCccccccccccCCCcc-ccccccCCCCCCcccchHHHHHHHHHHH
Q 009771 432 LNGKLA--HTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIM-LINVLDQRLSPPVNQKIVQDIILVSTIA 508 (526)
Q Consensus 432 l~~~~~--~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~la 508 (526)
..||.. .....+.++||||||++++|++||+.|..... ..... ...+......+..... ....+.++.
T Consensus 193 ~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~li 263 (287)
T 4f0f_A 193 MAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS------YGKIKFINMIREEGLRPTIPED---CPPRLRNVI 263 (287)
T ss_dssp SCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCC------CCHHHHHHHHHHSCCCCCCCTT---SCHHHHHHH
T ss_pred cCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCcccc------ccHHHHHHHHhccCCCCCCCcc---cCHHHHHHH
Confidence 456665 33456789999999999999999999954211 00000 1111111111111011 123456778
Q ss_pred HhcCCCCCCCCCCccccC
Q 009771 509 FACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 509 ~~C~~~~p~~RP~m~~v~ 526 (526)
..|++.+|++||++.||+
T Consensus 264 ~~~l~~dp~~Rps~~~ll 281 (287)
T 4f0f_A 264 ELCWSGDPKKRPHFSYIV 281 (287)
T ss_dssp HHHTCSSGGGSCCHHHHH
T ss_pred HHHhcCChhhCcCHHHHH
Confidence 899999999999999873
No 225
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=97.81 E-value=1.1e-06 Score=83.53 Aligned_cols=85 Identities=19% Similarity=0.247 Sum_probs=53.8
Q ss_pred CCCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHH
Q 009771 431 SLNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 431 ~l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
...||.......+.++||||||++++|++| |+.|...... . .....+........... ....+.++..
T Consensus 180 y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~-------~-~~~~~~~~~~~~~~~~~---~~~~l~~li~ 248 (278)
T 1byg_A 180 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-------K-DVVPRVEKGYKMDAPDG---CPPAVYEVMK 248 (278)
T ss_dssp TSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG-------G-GHHHHHTTTCCCCCCTT---CCHHHHHHHH
T ss_pred ccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCH-------H-HHHHHHhcCCCCCCccc---CCHHHHHHHH
Confidence 356787776778899999999999999998 9988542110 0 01111111111100011 1234556778
Q ss_pred hcCCCCCCCCCCccccC
Q 009771 510 ACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v~ 526 (526)
.|++.+|++||++.|++
T Consensus 249 ~~l~~~p~~Rps~~~l~ 265 (278)
T 1byg_A 249 NCWHLDAAMRPSFLQLR 265 (278)
T ss_dssp HHTCSSGGGSCCHHHHH
T ss_pred HHhcCChhhCCCHHHHH
Confidence 99999999999998863
No 226
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=97.80 E-value=2e-06 Score=84.10 Aligned_cols=86 Identities=13% Similarity=0.147 Sum_probs=49.8
Q ss_pred ccccccccccccceeeeehhcCCCCCccc---ccccc------ccCCCc-ccccc-----ccCCCCCCcccchHHHHHHH
Q 009771 440 MVVTEKCDVYSFGVVALEILMGRHPGELL---SSLSS------SSGPKI-MLINV-----LDQRLSPPVNQKIVQDIILV 504 (526)
Q Consensus 440 ~~~~~k~dvysfGv~llElltg~~P~~~~---~~~~~------~~~~~~-~~~~~-----~d~~l~~~~~~~~~~~~~~~ 504 (526)
...+.++|||||||+++|++||+.|.... ..+.. ...+.. ..... ..+.+.... .........+
T Consensus 210 ~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l 288 (336)
T 3g2f_A 210 ESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAW-KENSLAVRSL 288 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTC-CCCSHHHHHH
T ss_pred cccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCccc-ccccchHHHH
Confidence 45678899999999999999998873211 10000 000000 00000 011111111 1112345567
Q ss_pred HHHHHhcCCCCCCCCCCccccC
Q 009771 505 STIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 505 ~~la~~C~~~~p~~RP~m~~v~ 526 (526)
.++...|++.+|++||++.||+
T Consensus 289 ~~li~~cl~~dP~~Rps~~e~l 310 (336)
T 3g2f_A 289 KETIEDCWDQDAEARLTAQXAE 310 (336)
T ss_dssp HHHHHHHSCSSGGGSCCHHHHH
T ss_pred HHHHHHHhcCChhhCcchHHHH
Confidence 8889999999999999999873
No 227
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=97.80 E-value=3.7e-06 Score=83.40 Aligned_cols=35 Identities=14% Similarity=0.120 Sum_probs=29.9
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.......+.++|||||||+++|++||+.|..
T Consensus 202 ~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~ 236 (373)
T 1q8y_A 202 RSPEVLLGAPWGCGADIWSTACLIFELITGDFLFE 236 (373)
T ss_dssp CCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC-
T ss_pred cCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence 45777777778899999999999999999999954
No 228
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=97.80 E-value=9.3e-07 Score=86.23 Aligned_cols=84 Identities=21% Similarity=0.322 Sum_probs=55.1
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++|||||||+++|++| |+.|...... ..+.+.+......+.... ....+.++...
T Consensus 186 ~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~---~~~~l~~li~~ 254 (327)
T 3lzb_A 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--------SEISSILEKGERLPQPPI---CTIDVYMIMRK 254 (327)
T ss_dssp SCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG--------GGHHHHHHTTCCCCCCTT---BCHHHHHHHHH
T ss_pred cCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCH--------HHHHHHHHcCCCCCCCcc---CCHHHHHHHHH
Confidence 45777777778899999999999999999 9998543111 112222222111111011 12245677889
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|.+||+|.||+
T Consensus 255 ~l~~dp~~Rps~~ell 270 (327)
T 3lzb_A 255 CWMIDADSRPKFRELI 270 (327)
T ss_dssp HTCSSGGGSCCHHHHH
T ss_pred HcCCChhHCcCHHHHH
Confidence 9999999999999863
No 229
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=97.79 E-value=6.4e-07 Score=85.05 Aligned_cols=84 Identities=17% Similarity=0.188 Sum_probs=53.2
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++||||||++++|++||+.|....... .....+.+....... ... -..+.++...|
T Consensus 183 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~i~~~~~~~~~-~~~---~~~l~~li~~~ 251 (279)
T 2w5a_A 183 MSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK-------ELAGKIREGKFRRIP-YRY---SDELNEIITRM 251 (279)
T ss_dssp CCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHTCCCCCC-TTS---CHHHHHHHHHH
T ss_pred cChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH-------HHHHHHhhcccccCC-ccc---CHHHHHHHHHH
Confidence 4577777667889999999999999999999995432110 001111111111000 111 12355777899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|++||++.||+
T Consensus 252 l~~~p~~Rps~~~ll 266 (279)
T 2w5a_A 252 LNLKDYHRPSVEEIL 266 (279)
T ss_dssp TCSSGGGSCCHHHHH
T ss_pred cCCCcccCCCHHHHH
Confidence 999999999999874
No 230
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=97.79 E-value=7.9e-07 Score=84.58 Aligned_cols=85 Identities=24% Similarity=0.312 Sum_probs=54.0
Q ss_pred CCCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHH
Q 009771 431 SLNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 431 ~l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
...||.......+.++||||||++++|++| |+.|....... ...+.+......+..... -..+.++..
T Consensus 180 y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~~~---~~~l~~li~ 248 (281)
T 3cc6_A 180 WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK--------DVIGVLEKGDRLPKPDLC---PPVLYTLMT 248 (281)
T ss_dssp GCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG--------GHHHHHHHTCCCCCCTTC---CHHHHHHHH
T ss_pred eeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH--------HHHHHHhcCCCCCCCCCC---CHHHHHHHH
Confidence 346787776778899999999999999998 99995421110 011111110000000111 123557788
Q ss_pred hcCCCCCCCCCCccccC
Q 009771 510 ACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v~ 526 (526)
.|++.+|++||++.||+
T Consensus 249 ~~l~~~p~~Rps~~ell 265 (281)
T 3cc6_A 249 RCWDYDPSDRPRFTELV 265 (281)
T ss_dssp HHTCSSGGGSCCHHHHH
T ss_pred HHccCCchhCcCHHHHH
Confidence 99999999999999873
No 231
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=97.79 E-value=3.6e-06 Score=84.90 Aligned_cols=79 Identities=11% Similarity=-0.011 Sum_probs=51.9
Q ss_pred CCchhc----------ccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHH
Q 009771 432 LNGKLA----------HTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDI 501 (526)
Q Consensus 432 l~~~~~----------~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 501 (526)
..||.. .....+.++|||||||+++|++||+.|...... ......++.... .. .
T Consensus 274 ~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~-------~~~~~~~~~~~~-----~~-~--- 337 (413)
T 3dzo_A 274 APPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAA-------LGGSEWIFRSCK-----NI-P--- 337 (413)
T ss_dssp CCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGG-------GSCSGGGGSSCC-----CC-C---
T ss_pred eCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcch-------hhhHHHHHhhcc-----cC-C---
Confidence 457766 455678899999999999999999999542110 000111111110 11 1
Q ss_pred HHHHHHHHhcCCCCCCCCCCccccC
Q 009771 502 ILVSTIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 502 ~~~~~la~~C~~~~p~~RP~m~~v~ 526 (526)
..+.++...|++.+|++||++.|++
T Consensus 338 ~~~~~li~~~l~~dP~~Rpt~~~~l 362 (413)
T 3dzo_A 338 QPVRALLEGFLRYPKEDRLLPLQAM 362 (413)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred HHHHHHHHHHccCChhhCcCHHHHH
Confidence 2355677799999999999998764
No 232
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=97.78 E-value=7.1e-07 Score=86.63 Aligned_cols=92 Identities=17% Similarity=0.235 Sum_probs=56.7
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccc-------cccccCCCccccccccCCCCCCcccchHHHHHHH
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSS-------LSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILV 504 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~-------~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~ 504 (526)
..||.......+.++||||||++++|++||+.|...... +...........+.++.....+... .....+
T Consensus 204 ~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l 280 (318)
T 3lxp_A 204 YAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPD---KCPAEV 280 (318)
T ss_dssp CCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCCCCCT---TCCHHH
T ss_pred eChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccCCCCCc---cccHHH
Confidence 567877777788999999999999999999998542110 0000000001122222222211111 122346
Q ss_pred HHHHHhcCCCCCCCCCCccccC
Q 009771 505 STIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 505 ~~la~~C~~~~p~~RP~m~~v~ 526 (526)
.++...|++.+|++||++.||+
T Consensus 281 ~~li~~~l~~dP~~Rps~~ell 302 (318)
T 3lxp_A 281 YHLMKNCWETEASFRPTFENLI 302 (318)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHH
T ss_pred HHHHHHHcCCCcccCcCHHHHH
Confidence 6778899999999999999873
No 233
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=97.78 E-value=1e-06 Score=83.74 Aligned_cols=83 Identities=20% Similarity=0.277 Sum_probs=52.9
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++||||||++++|++| |+.|....... .....+......+.. .. ....+.++...
T Consensus 184 ~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~-------~~~~~i~~~~~~~~~-~~---~~~~l~~li~~ 252 (281)
T 1mp8_A 184 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-------DVIGRIENGERLPMP-PN---CPPTLYSLMTK 252 (281)
T ss_dssp CCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-------GHHHHHHTTCCCCCC-TT---CCHHHHHHHHH
T ss_pred cChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH-------HHHHHHHcCCCCCCC-CC---CCHHHHHHHHH
Confidence 45777766678889999999999999997 88885421110 001111111110000 11 12335577889
Q ss_pred cCCCCCCCCCCcccc
Q 009771 511 CLSSQPKSRPTMQRI 525 (526)
Q Consensus 511 C~~~~p~~RP~m~~v 525 (526)
|++.+|++||++.||
T Consensus 253 ~l~~~p~~Rps~~~l 267 (281)
T 1mp8_A 253 CWAYDPSRRPRFTEL 267 (281)
T ss_dssp HTCSSGGGSCCHHHH
T ss_pred HccCChhhCcCHHHH
Confidence 999999999999886
No 234
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=97.78 E-value=8.8e-07 Score=84.53 Aligned_cols=84 Identities=15% Similarity=0.225 Sum_probs=54.2
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++||||||++++|++| |+.|....... .....+........... ....+.++...
T Consensus 180 ~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--------~~~~~i~~~~~~~~~~~---~~~~l~~li~~ 248 (287)
T 1u59_A 180 YAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--------EVMAFIEQGKRMECPPE---CPPELYALMSD 248 (287)
T ss_dssp CCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH--------HHHHHHHTTCCCCCCTT---CCHHHHHHHHH
T ss_pred cCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH--------HHHHHHhcCCcCCCCCC---cCHHHHHHHHH
Confidence 46787776778899999999999999999 99995421110 01111111110000011 12345577889
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||++.||+
T Consensus 249 ~l~~~p~~Rps~~~l~ 264 (287)
T 1u59_A 249 CWIYKWEDRPDFLTVE 264 (287)
T ss_dssp TTCSSGGGSCCHHHHH
T ss_pred HcCCChhhCcCHHHHH
Confidence 9999999999998863
No 235
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=97.77 E-value=1e-06 Score=87.59 Aligned_cols=83 Identities=22% Similarity=0.341 Sum_probs=52.3
Q ss_pred CCchhcccccccccccccccceeeeehhcC-CCCCccccccccccCCCccccccccC-CCCCCcccchHHHHHHHHHHHH
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMG-RHPGELLSSLSSSSGPKIMLINVLDQ-RLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg-~~P~~~~~~~~~~~~~~~~~~~~~d~-~l~~~~~~~~~~~~~~~~~la~ 509 (526)
..||.......+.++|||||||+++|++|| +.|...... .+ ....+... +...+ .. ....+.++..
T Consensus 263 ~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~------~~-~~~~~~~~~~~~~p--~~---~~~~l~~li~ 330 (373)
T 3c1x_A 263 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT------FD-ITVYLLQGRRLLQP--EY---CPDPLYEVML 330 (373)
T ss_dssp SCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCS------SC-HHHHHHTTCCCCCC--TT---CCHHHHHHHH
T ss_pred cChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCH------HH-HHHHHHcCCCCCCC--CC---CCHHHHHHHH
Confidence 457877777889999999999999999995 444322110 00 01111111 11111 11 1234567788
Q ss_pred hcCCCCCCCCCCccccC
Q 009771 510 ACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v~ 526 (526)
.|++.+|++||++.||+
T Consensus 331 ~cl~~dp~~RPs~~ell 347 (373)
T 3c1x_A 331 KCWHPKAEMRPSFSELV 347 (373)
T ss_dssp HHTCSSGGGSCCHHHHH
T ss_pred HHcCCChhhCcCHHHHH
Confidence 99999999999999873
No 236
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=97.77 E-value=1.2e-06 Score=84.65 Aligned_cols=83 Identities=28% Similarity=0.413 Sum_probs=53.9
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCcccccc--ccCCCCCCcccchHHHHHHHHHHHH
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINV--LDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~--~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
..||.......+.++|||||||+++|++||+.|....... .....+ ...+...+ ... -..+.++..
T Consensus 206 ~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~-------~~~~~~~~~~~~~~~~--~~~---~~~l~~li~ 273 (309)
T 3p86_A 206 MAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA-------QVVAAVGFKCKRLEIP--RNL---NPQVAAIIE 273 (309)
T ss_dssp SCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH-------HHHHHHHHSCCCCCCC--TTS---CHHHHHHHH
T ss_pred cChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHhcCCCCCCC--ccC---CHHHHHHHH
Confidence 4678777777889999999999999999999995422110 000001 00111101 111 123557788
Q ss_pred hcCCCCCCCCCCccccC
Q 009771 510 ACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v~ 526 (526)
.|++.+|.+||++.||+
T Consensus 274 ~~l~~dP~~Rps~~~ll 290 (309)
T 3p86_A 274 GCWTNEPWKRPSFATIM 290 (309)
T ss_dssp HHTCSSGGGSCCHHHHH
T ss_pred HHccCChhhCcCHHHHH
Confidence 99999999999998863
No 237
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=97.77 E-value=1e-06 Score=85.08 Aligned_cols=84 Identities=24% Similarity=0.345 Sum_probs=54.3
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++||||||++++|++| |+.|...... ..+.+.+........... ....+.++...
T Consensus 219 ~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~---~~~~~~~li~~ 287 (314)
T 2ivs_A 219 MAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP--------ERLFNLLKTGHRMERPDN---CSEEMYRLMLQ 287 (314)
T ss_dssp CCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG--------GGHHHHHHTTCCCCCCTT---CCHHHHHHHHH
T ss_pred cChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHhhcCCcCCCCcc---CCHHHHHHHHH
Confidence 45777766778899999999999999999 9988542110 011111111111100011 12345677889
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||++.||+
T Consensus 288 ~l~~dp~~Rps~~~l~ 303 (314)
T 2ivs_A 288 CWKQEPDKRPVFADIS 303 (314)
T ss_dssp HTCSSGGGSCCHHHHH
T ss_pred HccCChhhCcCHHHHH
Confidence 9999999999999863
No 238
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=97.77 E-value=1.4e-06 Score=85.58 Aligned_cols=86 Identities=16% Similarity=0.260 Sum_probs=55.1
Q ss_pred CCCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHH
Q 009771 431 SLNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 431 ~l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
...||.......+.++||||||++++|++| |+.|...... .......+........... ....+.++..
T Consensus 240 y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~-------~~~~~~~~~~~~~~~~~~~---~~~~l~~li~ 309 (344)
T 1rjb_A 240 WMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV-------DANFYKLIQNGFKMDQPFY---ATEEIYIIMQ 309 (344)
T ss_dssp GCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC-------SHHHHHHHHTTCCCCCCTT---CCHHHHHHHH
T ss_pred ccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCc-------HHHHHHHHhcCCCCCCCCC---CCHHHHHHHH
Confidence 356787766778899999999999999998 9988543210 0011112222111111011 1234556788
Q ss_pred hcCCCCCCCCCCccccC
Q 009771 510 ACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v~ 526 (526)
.|++.+|.+||++.||+
T Consensus 310 ~~l~~dp~~Rps~~~l~ 326 (344)
T 1rjb_A 310 SCWAFDSRKRPSFPNLT 326 (344)
T ss_dssp HHTCSSGGGSCCHHHHH
T ss_pred HHcCCCchhCcCHHHHH
Confidence 99999999999998863
No 239
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=97.77 E-value=2.1e-06 Score=85.89 Aligned_cols=86 Identities=21% Similarity=0.304 Sum_probs=54.2
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++||||+||++.||++|+.|........ .. . .+.+...+.+... ....++ +..+-..|
T Consensus 314 mAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~--~~-~-~i~~~~~~~~~~~--~~~s~~---~~dli~~~ 384 (423)
T 4fie_A 314 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK--AM-K-MIRDNLPPRLKNL--HKVSPS---LKGFLDRL 384 (423)
T ss_dssp CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HH-H-HHHHSCCCCCSCT--TSSCHH---HHHHHHHH
T ss_pred CCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH--HH-H-HHHcCCCCCCccc--ccCCHH---HHHHHHHH
Confidence 56888877788999999999999999999999953211000 00 0 0111111222111 111223 34566789
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|++||++.|++
T Consensus 385 L~~dP~~R~ta~ell 399 (423)
T 4fie_A 385 LVRDPAQRATAAELL 399 (423)
T ss_dssp SCSSTTTSCCHHHHT
T ss_pred cCCChhHCcCHHHHh
Confidence 999999999998874
No 240
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=97.77 E-value=8.6e-07 Score=83.71 Aligned_cols=84 Identities=23% Similarity=0.316 Sum_probs=53.7
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++||||+|++++|++| |+.|...... ......+... ......... -..+.++...
T Consensus 174 ~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~-------~~~~~~~~~~-~~~~~~~~~---~~~~~~li~~ 242 (269)
T 4hcu_A 174 ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-------SEVVEDISTG-FRLYKPRLA---STHVYQIMNH 242 (269)
T ss_dssp CCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-------HHHHHHHHTT-CCCCCCTTS---CHHHHHHHHH
T ss_pred CCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCH-------HHHHHHHhcC-ccCCCCCcC---CHHHHHHHHH
Confidence 45787777788899999999999999999 8888542110 0001111111 110000111 1235577889
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||++.|++
T Consensus 243 ~l~~~p~~Rps~~~ll 258 (269)
T 4hcu_A 243 CWRERPEDRPAFSRLL 258 (269)
T ss_dssp HTCSSGGGSCCHHHHH
T ss_pred HccCCcccCcCHHHHH
Confidence 9999999999999863
No 241
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=97.77 E-value=1.1e-06 Score=85.82 Aligned_cols=85 Identities=22% Similarity=0.319 Sum_probs=54.1
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++||||||++++|++| |+.|...... ......++............ ...+.++...
T Consensus 233 ~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~-------~~~~~~~~~~~~~~~~~~~~---~~~l~~li~~ 302 (333)
T 2i1m_A 233 MAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV-------NSKFYKLVKDGYQMAQPAFA---PKNIYSIMQA 302 (333)
T ss_dssp SCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCS-------SHHHHHHHHHTCCCCCCTTC---CHHHHHHHHH
T ss_pred cCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccch-------hHHHHHHHhcCCCCCCCCCC---CHHHHHHHHH
Confidence 46777766778899999999999999999 8888542110 00111111111111000111 2345577889
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|.+||++.||+
T Consensus 303 ~l~~~p~~Rps~~~l~ 318 (333)
T 2i1m_A 303 CWALEPTHRPTFQQIC 318 (333)
T ss_dssp HTCSSGGGSCCHHHHH
T ss_pred HhccChhhCcCHHHHH
Confidence 9999999999999873
No 242
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=97.77 E-value=9.7e-07 Score=83.24 Aligned_cols=83 Identities=25% Similarity=0.492 Sum_probs=53.7
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccC-CCCCCcccchHHHHHHHHHHHH
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQ-RLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~-~l~~~~~~~~~~~~~~~~~la~ 509 (526)
..||.......+.++||||||++++|++| |+.|....... .....+... ....+ .... ..+.++..
T Consensus 172 ~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~--~~~~---~~l~~li~ 239 (268)
T 3sxs_A 172 SAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS-------EVVLKVSQGHRLYRP--HLAS---DTIYQIMY 239 (268)
T ss_dssp CCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH-------HHHHHHHTTCCCCCC--TTSC---HHHHHHHH
T ss_pred CCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH-------HHHHHHHcCCCCCCC--CcCh---HHHHHHHH
Confidence 45787777778999999999999999999 99885421110 001111110 11111 1111 23557788
Q ss_pred hcCCCCCCCCCCccccC
Q 009771 510 ACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v~ 526 (526)
.|++.+|++||++.||+
T Consensus 240 ~~l~~~p~~Rps~~~ll 256 (268)
T 3sxs_A 240 SCWHELPEKRPTFQQLL 256 (268)
T ss_dssp HTTCSSGGGSCCHHHHH
T ss_pred HHcCCChhhCcCHHHHH
Confidence 99999999999999873
No 243
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=97.76 E-value=5e-06 Score=78.61 Aligned_cols=86 Identities=21% Similarity=0.194 Sum_probs=51.3
Q ss_pred CCchhcccccc-cccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVV-TEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~-~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||....... +.++||||||++++|++||+.|....... ......+.............. ..+.++...
T Consensus 174 ~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~~~~~~~~~~~~~---~~~~~li~~ 244 (276)
T 2yex_A 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS------CQEYSDWKEKKTYLNPWKKID---SAPLALLHK 244 (276)
T ss_dssp CCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTT------SHHHHHHHTTCTTSTTGGGSC---HHHHHHHHH
T ss_pred cChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchH------HHHHHHhhhcccccCchhhcC---HHHHHHHHH
Confidence 34666554443 67899999999999999999995421110 000111111111000001111 234567889
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||++.||+
T Consensus 245 ~l~~~p~~Rps~~~il 260 (276)
T 2yex_A 245 ILVENPSARITIPDIK 260 (276)
T ss_dssp HSCSSTTTSCCHHHHT
T ss_pred HCCCCchhCCCHHHHh
Confidence 9999999999999874
No 244
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=97.76 E-value=1.4e-06 Score=92.84 Aligned_cols=85 Identities=16% Similarity=0.210 Sum_probs=55.9
Q ss_pred CCCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHH
Q 009771 431 SLNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 431 ~l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
...||.......+.++|||||||+++|++| |+.|...... ..+.+.+.......... .+...+.++..
T Consensus 538 y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~--------~~~~~~i~~~~~~~~p~---~~~~~l~~li~ 606 (635)
T 4fl3_A 538 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG--------SEVTAMLEKGERMGCPA---GCPREMYDLMN 606 (635)
T ss_dssp GSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH--------HHHHHHHHTTCCCCCCT---TCCHHHHHHHH
T ss_pred eeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHcCCCCCCCC---CCCHHHHHHHH
Confidence 346888877788999999999999999998 9999543111 01111111111111101 12234567788
Q ss_pred hcCCCCCCCCCCccccC
Q 009771 510 ACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v~ 526 (526)
.|++.+|++||+|.+|+
T Consensus 607 ~cl~~dP~~RPs~~~l~ 623 (635)
T 4fl3_A 607 LCWTYDVENRPGFAAVE 623 (635)
T ss_dssp HHTCSSTTTSCCHHHHH
T ss_pred HHcCCCHhHCcCHHHHH
Confidence 99999999999998863
No 245
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=97.76 E-value=8.8e-07 Score=86.16 Aligned_cols=87 Identities=17% Similarity=0.182 Sum_probs=54.6
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|||||||+++|++||+.|...... ......+.......+. ....+.-..+.++...|
T Consensus 170 ~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-------~~~~~~i~~~~~~~~~-~~~~~~s~~~~~li~~~ 241 (321)
T 1tki_A 170 YAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN-------QQIIENIMNAEYTFDE-EAFKEISIEAMDFVDRL 241 (321)
T ss_dssp SCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH-------HHHHHHHHHTCCCCCH-HHHTTSCHHHHHHHHTT
T ss_pred cCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH-------HHHHHHHHcCCCCCCh-hhhccCCHHHHHHHHHH
Confidence 457777666678999999999999999999999532110 0011122222221110 00001123455778899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
+..+|++||++.|++
T Consensus 242 L~~dp~~Rpt~~e~l 256 (321)
T 1tki_A 242 LVKERKSRMTASEAL 256 (321)
T ss_dssp SCSSGGGSCCHHHHH
T ss_pred cCCChhHCcCHHHHh
Confidence 999999999998863
No 246
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=97.76 E-value=5.8e-07 Score=88.62 Aligned_cols=89 Identities=10% Similarity=-0.013 Sum_probs=53.9
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCc-----cccccccCCCCCCcccchHHHHHHHHH
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKI-----MLINVLDQRLSPPVNQKIVQDIILVST 506 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~-----~~~~~~d~~l~~~~~~~~~~~~~~~~~ 506 (526)
..||.......+.++|||||||+++|++||+.|......-........ ......+..... ... ...+.+
T Consensus 235 ~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~~~l~~ 308 (352)
T 2jii_A 235 ISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHW---IRP---SETLQK 308 (352)
T ss_dssp CCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCE---ECC---CHHHHH
T ss_pred cCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhcccc---CCC---cHHHHH
Confidence 457877777788999999999999999999999543210000000000 000011111000 011 134556
Q ss_pred HHHhcCCCCCCCCCCccccC
Q 009771 507 IAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 507 la~~C~~~~p~~RP~m~~v~ 526 (526)
+...|++.+|++||++.||+
T Consensus 309 li~~~l~~dp~~Rps~~~l~ 328 (352)
T 2jii_A 309 YLKVVMALTYEEKPPYAMLR 328 (352)
T ss_dssp HHHHHHTCCTTCCCCHHHHH
T ss_pred HHHHHHhCChhhCCCHHHHH
Confidence 77899999999999998863
No 247
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=97.76 E-value=1.8e-06 Score=83.48 Aligned_cols=81 Identities=17% Similarity=0.189 Sum_probs=51.3
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.... ..+.++|||||||+++|+++|+.|......+. .+......+ ......-..+.++...|
T Consensus 223 ~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~~----------~~~~~~~~~---~~~~~~~~~l~~li~~~ 288 (311)
T 3p1a_A 223 MAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQ----------QLRQGYLPP---EFTAGLSSELRSVLVMM 288 (311)
T ss_dssp CCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHH----------HHTTTCCCH---HHHTTSCHHHHHHHHHH
T ss_pred cCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHH----------HHhccCCCc---ccccCCCHHHHHHHHHH
Confidence 45776654 67889999999999999999987633211111 111111100 00001123456778899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|++||++.|++
T Consensus 289 L~~dP~~Rpt~~ell 303 (311)
T 3p1a_A 289 LEPDPKLRATAEALL 303 (311)
T ss_dssp SCSSTTTSCCHHHHH
T ss_pred cCCChhhCcCHHHHH
Confidence 999999999999873
No 248
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=97.75 E-value=4.3e-07 Score=88.55 Aligned_cols=92 Identities=20% Similarity=0.282 Sum_probs=55.7
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCcccccc-----cc-ccCCC-ccccccccCCCCCCcccchHHHHHHH
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSL-----SS-SSGPK-IMLINVLDQRLSPPVNQKIVQDIILV 504 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~-----~~-~~~~~-~~~~~~~d~~l~~~~~~~~~~~~~~~ 504 (526)
..||.......+.++||||||++++|++||+.|....... .. ...+. ....+.+........ .......+
T Consensus 197 ~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l 273 (327)
T 3lxl_A 197 YAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPA---PPACPAEV 273 (327)
T ss_dssp SCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTCCCCC---CTTCCHHH
T ss_pred cCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcccCCCC---CCcccHHH
Confidence 4578777777889999999999999999999994321110 00 00000 001112222221111 11122345
Q ss_pred HHHHHhcCCCCCCCCCCccccC
Q 009771 505 STIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 505 ~~la~~C~~~~p~~RP~m~~v~ 526 (526)
.++...|++.+|++||+|.||+
T Consensus 274 ~~li~~~l~~dP~~Rps~~ell 295 (327)
T 3lxl_A 274 HELMKLCWAPSPQDRPSFSALG 295 (327)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHH
T ss_pred HHHHHHHcCCChhhCcCHHHHH
Confidence 6778899999999999999873
No 249
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=97.75 E-value=1.2e-06 Score=83.43 Aligned_cols=87 Identities=17% Similarity=0.151 Sum_probs=53.8
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++||||||++++|++||+.|....... .....+......... .........+.++...|
T Consensus 178 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~ 249 (283)
T 3bhy_A 178 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ-------ETLTNISAVNYDFDE-EYFSNTSELAKDFIRRL 249 (283)
T ss_dssp CCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-------HHHHHHHTTCCCCCH-HHHTTCCHHHHHHHHTT
T ss_pred cCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH-------HHHHHhHhcccCCcc-hhcccCCHHHHHHHHHH
Confidence 4577776667889999999999999999999995421100 001111111100000 00001123456788899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|++||++.|++
T Consensus 250 l~~dp~~Rps~~~~l 264 (283)
T 3bhy_A 250 LVKDPKRRMTIAQSL 264 (283)
T ss_dssp SCSSGGGSCCHHHHH
T ss_pred ccCCHhHCcCHHHHH
Confidence 999999999998863
No 250
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=97.75 E-value=2e-06 Score=82.19 Aligned_cols=85 Identities=18% Similarity=0.251 Sum_probs=52.3
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||... ...+.++||||+|++++|++||+.|....... . .....+.....+. .........+.++...|
T Consensus 197 ~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~------~-~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~ 266 (290)
T 1t4h_A 197 MAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNA------A-QIYRRVTSGVKPA--SFDKVAIPEVKEIIEGC 266 (290)
T ss_dssp CCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH------H-HHHHHHTTTCCCG--GGGGCCCHHHHHHHHHH
T ss_pred CCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcH------H-HHHHHHhccCCcc--ccCCCCCHHHHHHHHHH
Confidence 4577655 35788999999999999999999995321110 0 0111111111110 00001113466778899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|++||++.||+
T Consensus 267 l~~dp~~Rps~~ell 281 (290)
T 1t4h_A 267 IRQNKDERYSIKDLL 281 (290)
T ss_dssp SCSSGGGSCCHHHHH
T ss_pred ccCChhhCCCHHHHh
Confidence 999999999999873
No 251
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=97.75 E-value=1.4e-06 Score=84.21 Aligned_cols=86 Identities=15% Similarity=0.183 Sum_probs=53.0
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccc-cccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLIN-VLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~-~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++||||||++++|++||+.|..... ........ +......+...... -..+.++...
T Consensus 203 ~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~li~~ 273 (310)
T 2wqm_A 203 MSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK------MNLYSLCKKIEQCDYPPLPSDHY---SEELRQLVNM 273 (310)
T ss_dssp CCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---------CCHHHHHHHHHTTCSCCCCTTTS---CHHHHHHHHH
T ss_pred eChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccc------hhHHHHHHHhhcccCCCCccccc---CHHHHHHHHH
Confidence 45777776778899999999999999999999953210 00000101 11111110000111 1235577889
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||++.||+
T Consensus 274 ~l~~dp~~Rps~~~il 289 (310)
T 2wqm_A 274 CINPDPEKRPDVTYVY 289 (310)
T ss_dssp HTCSSGGGSCCHHHHH
T ss_pred HcCCChhhCCCHHHHH
Confidence 9999999999999873
No 252
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=97.74 E-value=2.6e-06 Score=84.14 Aligned_cols=35 Identities=20% Similarity=0.214 Sum_probs=30.4
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.......+.++|||||||+++|++||+.|..
T Consensus 226 ~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~ 260 (360)
T 3llt_A 226 RAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFR 260 (360)
T ss_dssp CCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCC
T ss_pred cCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCC
Confidence 45777777778999999999999999999999953
No 253
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=97.74 E-value=1e-06 Score=86.42 Aligned_cols=84 Identities=21% Similarity=0.286 Sum_probs=54.6
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++||||||++++|++| |+.|...... ......+.+....... .. ....+.++...
T Consensus 243 ~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~-------~~~~~~~~~~~~~~~~-~~---~~~~l~~li~~ 311 (343)
T 1luf_A 243 MPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH-------EEVIYYVRDGNILACP-EN---CPLELYNLMRL 311 (343)
T ss_dssp CCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH-------HHHHHHHHTTCCCCCC-TT---CCHHHHHHHHH
T ss_pred cChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCCh-------HHHHHHHhCCCcCCCC-CC---CCHHHHHHHHH
Confidence 45787776778899999999999999999 9988542110 0001111111111111 11 12345677889
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||++.||+
T Consensus 312 ~l~~~p~~Rps~~~~~ 327 (343)
T 1luf_A 312 CWSKLPADRPSFCSIH 327 (343)
T ss_dssp HTCSSGGGSCCHHHHH
T ss_pred HcccCcccCCCHHHHH
Confidence 9999999999998863
No 254
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=97.74 E-value=1.3e-06 Score=84.39 Aligned_cols=85 Identities=19% Similarity=0.313 Sum_probs=54.5
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++||||||++++|++| |+.|...... .......+............ ...+.++...
T Consensus 214 ~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-------~~~~~~~~~~~~~~~~~~~~---~~~l~~li~~ 283 (313)
T 1t46_A 214 MAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV-------DSKFYKMIKEGFRMLSPEHA---PAEMYDIMKT 283 (313)
T ss_dssp CCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCS-------SHHHHHHHHHTCCCCCCTTS---CHHHHHHHHH
T ss_pred eChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccc-------hhHHHHHhccCCCCCCcccC---CHHHHHHHHH
Confidence 45787767778899999999999999999 8888532110 00111112211111110111 2345577889
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|.+||++.||+
T Consensus 284 ~l~~dp~~Rps~~ell 299 (313)
T 1t46_A 284 CWDADPLKRPTFKQIV 299 (313)
T ss_dssp HTCSSGGGSCCHHHHH
T ss_pred HcCCCchhCcCHHHHH
Confidence 9999999999999873
No 255
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=97.74 E-value=2e-06 Score=81.10 Aligned_cols=85 Identities=22% Similarity=0.330 Sum_probs=50.5
Q ss_pred CCchhccccccc---ccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHH
Q 009771 432 LNGKLAHTMVVT---EKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIA 508 (526)
Q Consensus 432 l~~~~~~~~~~~---~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la 508 (526)
..||........ .++||||||++++|++||+.|....... .....+......+...... -..+.++.
T Consensus 175 ~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~~~~~---~~~~~~li 244 (271)
T 3kmu_A 175 VAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNM-------EIGMKVALEGLRPTIPPGI---SPHVSKLM 244 (271)
T ss_dssp SCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHH-------HHHHHHHHSCCCCCCCTTC---CHHHHHHH
T ss_pred cChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChH-------HHHHHHHhcCCCCCCCCCC---CHHHHHHH
Confidence 456665543333 3799999999999999999995421110 0011111111111110111 12355677
Q ss_pred HhcCCCCCCCCCCccccC
Q 009771 509 FACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 509 ~~C~~~~p~~RP~m~~v~ 526 (526)
..|++.+|++||++.||+
T Consensus 245 ~~~l~~~p~~Rps~~~il 262 (271)
T 3kmu_A 245 KICMNEDPAKRPKFDMIV 262 (271)
T ss_dssp HHHTCSSGGGSCCHHHHH
T ss_pred HHHcCCChhhCcCHHHHH
Confidence 889999999999998863
No 256
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=97.73 E-value=1.2e-06 Score=82.60 Aligned_cols=83 Identities=27% Similarity=0.400 Sum_probs=53.0
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccC-CCCCCcccchHHHHHHHHHHHH
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQ-RLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~-~l~~~~~~~~~~~~~~~~~la~ 509 (526)
..||.......+.++||||||++++|++| |+.|...... ......+... +...+ ... -..+.++..
T Consensus 172 ~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-------~~~~~~i~~~~~~~~~--~~~---~~~l~~li~ 239 (267)
T 3t9t_A 172 ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-------SEVVEDISTGFRLYKP--RLA---STHVYQIMN 239 (267)
T ss_dssp CCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-------HHHHHHHHTTCCCCCC--TTS---CHHHHHHHH
T ss_pred cChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH-------HHHHHHHhcCCcCCCC--ccC---cHHHHHHHH
Confidence 45777766678899999999999999999 8888542110 0001111111 11000 111 123557789
Q ss_pred hcCCCCCCCCCCccccC
Q 009771 510 ACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v~ 526 (526)
.|++.+|++||++.|++
T Consensus 240 ~~l~~~p~~Rps~~~ll 256 (267)
T 3t9t_A 240 HCWRERPEDRPAFSRLL 256 (267)
T ss_dssp HHTCSSGGGSCCHHHHH
T ss_pred HHccCChhhCcCHHHHH
Confidence 99999999999998863
No 257
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=97.73 E-value=1.3e-06 Score=91.35 Aligned_cols=83 Identities=22% Similarity=0.335 Sum_probs=53.7
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++|||||||+++|++| |+.|....... .+.+.+......+... .+...+.++...
T Consensus 431 ~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~--------~~~~~i~~~~~~~~~~---~~~~~l~~li~~ 499 (535)
T 2h8h_A 431 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--------EVLDQVERGYRMPCPP---ECPESLHDLMCQ 499 (535)
T ss_dssp SCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH--------HHHHHHHTTCCCCCCT---TCCHHHHHHHHH
T ss_pred cCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCCCCCCCC---CCCHHHHHHHHH
Confidence 45777776778999999999999999999 88885421110 0111111111100001 122345577889
Q ss_pred cCCCCCCCCCCcccc
Q 009771 511 CLSSQPKSRPTMQRI 525 (526)
Q Consensus 511 C~~~~p~~RP~m~~v 525 (526)
|++.+|++||+|.+|
T Consensus 500 cl~~dP~~RPt~~~l 514 (535)
T 2h8h_A 500 CWRKEPEERPTFEYL 514 (535)
T ss_dssp HTCSSGGGSCCHHHH
T ss_pred HcCCChhHCcCHHHH
Confidence 999999999999886
No 258
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=97.73 E-value=2.1e-06 Score=83.69 Aligned_cols=80 Identities=18% Similarity=0.335 Sum_probs=45.5
Q ss_pred Cchhc---ccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHH
Q 009771 433 NGKLA---HTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 433 ~~~~~---~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
.||.. .....+.++|||||||+++|++||+.|....... ++++.....+..... ...+.++..
T Consensus 218 aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-----------~~~~~~~~~~~~~~~---~~~~~~li~ 283 (337)
T 3ll6_A 218 TPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL-----------RIVNGKYSIPPHDTQ---YTVFHSLIR 283 (337)
T ss_dssp ------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----------------------CCCCTTCCS---SGGGHHHHH
T ss_pred ChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH-----------HhhcCcccCCccccc---chHHHHHHH
Confidence 45544 3445678999999999999999999995421110 111111110000111 112456788
Q ss_pred hcCCCCCCCCCCccccC
Q 009771 510 ACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v~ 526 (526)
.|++.+|++||++.||+
T Consensus 284 ~~l~~~p~~Rps~~e~l 300 (337)
T 3ll6_A 284 AMLQVNPEERLSIAEVV 300 (337)
T ss_dssp HHSCSSGGGSCCHHHHH
T ss_pred HHccCChhhCcCHHHHH
Confidence 99999999999998863
No 259
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=97.72 E-value=5.9e-07 Score=92.35 Aligned_cols=90 Identities=13% Similarity=0.127 Sum_probs=55.3
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|||||||+++|++||+.|........ .......+.+..+.............++.++...|
T Consensus 180 ~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~----~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~c 255 (483)
T 3sv0_A 180 ASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGT----KKQKYEKISEKKVATSIEALCRGYPTEFASYFHYC 255 (483)
T ss_dssp CCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSS----HHHHHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHH
T ss_pred cCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchh----HHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHH
Confidence 45777777778899999999999999999999964321100 00001111111110000000000123567888999
Q ss_pred CCCCCCCCCCcccc
Q 009771 512 LSSQPKSRPTMQRI 525 (526)
Q Consensus 512 ~~~~p~~RP~m~~v 525 (526)
++.+|++||+|.+|
T Consensus 256 l~~dP~~RPs~~el 269 (483)
T 3sv0_A 256 RSLRFDDKPDYSYL 269 (483)
T ss_dssp HTCCTTCCCCHHHH
T ss_pred hcCChhhCcCHHHH
Confidence 99999999999876
No 260
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=97.72 E-value=3.4e-06 Score=82.23 Aligned_cols=35 Identities=20% Similarity=0.342 Sum_probs=30.2
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.......+.++||||||++++|++||+.|..
T Consensus 201 ~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~ 235 (339)
T 1z57_A 201 RAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFP 235 (339)
T ss_dssp CCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred cChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCC
Confidence 45777777778899999999999999999999953
No 261
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=97.72 E-value=2.2e-06 Score=83.01 Aligned_cols=84 Identities=18% Similarity=0.245 Sum_probs=50.0
Q ss_pred CCchhc-----ccccccccccccccceeeeehhcCCCCCccccccccccCCCcccccccc---CCCCCCcccchHHHHHH
Q 009771 432 LNGKLA-----HTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLD---QRLSPPVNQKIVQDIIL 503 (526)
Q Consensus 432 l~~~~~-----~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d---~~l~~~~~~~~~~~~~~ 503 (526)
..||.. .....+.++||||||++++|++||+.|....... ......++. +.+... .... ..
T Consensus 191 ~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~~~~~~~~~~~~~~--~~~~---~~ 259 (318)
T 2dyl_A 191 MAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD------FEVLTKVLQEEPPLLPGH--MGFS---GD 259 (318)
T ss_dssp CCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSH------HHHHHHHHHSCCCCCCSS--SCCC---HH
T ss_pred cChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCcc------HHHHHHHhccCCCCCCcc--CCCC---HH
Confidence 456665 2445778999999999999999999995421100 000111111 111100 1111 23
Q ss_pred HHHHHHhcCCCCCCCCCCccccC
Q 009771 504 VSTIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 504 ~~~la~~C~~~~p~~RP~m~~v~ 526 (526)
+.++...|++.+|.+||++.||+
T Consensus 260 l~~li~~~l~~dp~~Rps~~~ll 282 (318)
T 2dyl_A 260 FQSFVKDCLTKDHRKRPKYNKLL 282 (318)
T ss_dssp HHHHHHHHTCSCTTTSCCHHHHT
T ss_pred HHHHHHHHccCChhHCcCHHHHh
Confidence 45677899999999999999874
No 262
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=97.72 E-value=2.4e-06 Score=81.75 Aligned_cols=83 Identities=19% Similarity=0.331 Sum_probs=54.0
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++||||||++++|++||+.|....... .....+.......+ .... ..+.++...|
T Consensus 182 ~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~~~--~~~~---~~~~~li~~~ 249 (294)
T 2rku_A 182 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK-------ETYLRIKKNEYSIP--KHIN---PVAASLIQKM 249 (294)
T ss_dssp CCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-------HHHHHHHTTCCCCC--TTSC---HHHHHHHHHH
T ss_pred CCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHhhccCCCc--cccC---HHHHHHHHHH
Confidence 4678777777889999999999999999999995421100 00111111111111 1111 2345677899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|++||++.|++
T Consensus 250 l~~~p~~Rps~~~ll 264 (294)
T 2rku_A 250 LQTDPTARPTINELL 264 (294)
T ss_dssp TCSSGGGSCCGGGGG
T ss_pred cccChhhCcCHHHHh
Confidence 999999999999974
No 263
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=97.72 E-value=1.3e-06 Score=85.19 Aligned_cols=84 Identities=24% Similarity=0.269 Sum_probs=53.1
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++||||||++++|++| |+.|...... . ...+.+........... ....+.++...
T Consensus 212 ~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-------~-~~~~~~~~~~~~~~~~~---~~~~l~~li~~ 280 (327)
T 2yfx_A 212 MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-------Q-EVLEFVTSGGRMDPPKN---CPGPVYRIMTQ 280 (327)
T ss_dssp CCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-------H-HHHHHHHTTCCCCCCTT---CCHHHHHHHHH
T ss_pred eCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH-------H-HHHHHHhcCCCCCCCCC---CCHHHHHHHHH
Confidence 45777766778899999999999999998 8888532110 0 01111111000000011 12245577889
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|.+||++.||+
T Consensus 281 ~l~~dp~~Rps~~~ll 296 (327)
T 2yfx_A 281 CWQHQPEDRPNFAIIL 296 (327)
T ss_dssp HTCSSGGGSCCHHHHH
T ss_pred HhcCChhhCcCHHHHH
Confidence 9999999999998873
No 264
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=97.71 E-value=1.3e-06 Score=85.02 Aligned_cols=87 Identities=20% Similarity=0.167 Sum_probs=53.6
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|||||||+++|++||+.|...... ......+......... ......-..+.++...|
T Consensus 184 ~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~ 255 (326)
T 2y0a_A 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK-------QETLANVSAVNYEFED-EYFSNTSALAKDFIRRL 255 (326)
T ss_dssp CCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH-------HHHHHHHHHTCCCCCH-HHHTTSCHHHHHHHHHH
T ss_pred CCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH-------HHHHHHHHhcCCCcCc-cccccCCHHHHHHHHHH
Confidence 457877767788999999999999999999999532110 0001111111110000 00000112345677899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|++||++.|++
T Consensus 256 L~~dP~~Rpt~~e~l 270 (326)
T 2y0a_A 256 LVKDPKKRMTIQDSL 270 (326)
T ss_dssp SCSSGGGSCCHHHHH
T ss_pred ccCChhhCCCHHHHh
Confidence 999999999998863
No 265
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=97.71 E-value=1.1e-06 Score=83.47 Aligned_cols=84 Identities=23% Similarity=0.296 Sum_probs=53.2
Q ss_pred CCCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHH
Q 009771 431 SLNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 431 ~l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
...||.......+.++||||||++++|++| |+.|....... .....+............ -..+.++..
T Consensus 176 y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~~~---~~~l~~li~ 244 (279)
T 1qpc_A 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP--------EVIQNLERGYRMVRPDNC---PEELYQLMR 244 (279)
T ss_dssp TSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--------HHHHHHHTTCCCCCCTTC---CHHHHHHHH
T ss_pred ccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH--------HHHHHHhcccCCCCcccc---cHHHHHHHH
Confidence 345787776778899999999999999999 88885321100 000111111100000111 134557788
Q ss_pred hcCCCCCCCCCCcccc
Q 009771 510 ACLSSQPKSRPTMQRI 525 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v 525 (526)
.|++.+|++||++.|+
T Consensus 245 ~~l~~~p~~Rps~~~l 260 (279)
T 1qpc_A 245 LCWKERPEDRPTFDYL 260 (279)
T ss_dssp HHTCSSGGGSCCHHHH
T ss_pred HHhccChhhCCCHHHH
Confidence 9999999999999886
No 266
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=97.71 E-value=4.8e-06 Score=83.23 Aligned_cols=35 Identities=17% Similarity=0.102 Sum_probs=30.2
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.......+.++|||||||+++|++||+.|..
T Consensus 260 ~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~ 294 (397)
T 1wak_A 260 RSLEVLIGSGYNTPADIWSTACMAFELATGDYLFE 294 (397)
T ss_dssp CCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred cCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCC
Confidence 45777776778899999999999999999999954
No 267
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=97.70 E-value=1.4e-06 Score=83.78 Aligned_cols=84 Identities=20% Similarity=0.358 Sum_probs=53.9
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++||||||++++|++||+.|.......... ..+.....+.+. ... -..+.++...|
T Consensus 186 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~----~~~~~~~~~~~~----~~~---~~~l~~li~~~ 254 (303)
T 3a7i_A 186 MAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVL----FLIPKNNPPTLE----GNY---SKPLKEFVEAC 254 (303)
T ss_dssp CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH----HHHHHSCCCCCC----SSC---CHHHHHHHHHH
T ss_pred cCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHH----HHhhcCCCCCCc----ccc---CHHHHHHHHHH
Confidence 4577777777889999999999999999999995422110000 000000011111 111 12355778899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|++||++.||+
T Consensus 255 l~~dp~~Rps~~~ll 269 (303)
T 3a7i_A 255 LNKEPSFRPTAKELL 269 (303)
T ss_dssp CCSSGGGSCCHHHHT
T ss_pred cCCChhhCcCHHHHh
Confidence 999999999999874
No 268
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=97.70 E-value=1.4e-06 Score=82.90 Aligned_cols=84 Identities=23% Similarity=0.307 Sum_probs=54.0
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++||||+|++++|++| |+.|....... ...+.+............ -..+.++...
T Consensus 188 ~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~~~---~~~l~~li~~ 256 (283)
T 3gen_A 188 SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS--------ETAEHIAQGLRLYRPHLA---SEKVYTIMYS 256 (283)
T ss_dssp CCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--------HHHHHHHTTCCCCCCTTC---CHHHHHHHHH
T ss_pred CCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh--------HHHHHHhcccCCCCCCcC---CHHHHHHHHH
Confidence 45777776778899999999999999998 99985421111 011111111111000111 1245578889
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|.+||++.||+
T Consensus 257 ~l~~~p~~Rps~~~ll 272 (283)
T 3gen_A 257 CWHEKADERPTFKILL 272 (283)
T ss_dssp TTCSSGGGSCCHHHHH
T ss_pred HccCChhHCcCHHHHH
Confidence 9999999999998863
No 269
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=97.70 E-value=1.7e-06 Score=82.98 Aligned_cols=85 Identities=26% Similarity=0.289 Sum_probs=52.7
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++||||||++++|++||+.|..... .+. ...+.+............ -..+.++...|
T Consensus 195 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~------~~~-~~~~~~~~~~~~~~~~~~---~~~l~~li~~~ 264 (298)
T 3pls_A 195 TALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHI------DPF-DLTHFLAQGRRLPQPEYC---PDSLYQVMQQC 264 (298)
T ss_dssp SCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS------CGG-GHHHHHHTTCCCCCCTTC---CHHHHHHHHHH
T ss_pred cChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccC------CHH-HHHHHhhcCCCCCCCccc---hHHHHHHHHHH
Confidence 45777777778899999999999999999777732100 000 111111111111110111 12455778899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|.+||++.||+
T Consensus 265 l~~~p~~Rps~~~ll 279 (298)
T 3pls_A 265 WEADPAVRPTFRVLV 279 (298)
T ss_dssp TCSSGGGSCCHHHHH
T ss_pred ccCChhhCcCHHHHH
Confidence 999999999998863
No 270
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=97.70 E-value=1.9e-06 Score=85.69 Aligned_cols=87 Identities=18% Similarity=0.090 Sum_probs=54.8
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|||||||+++|++||+.|...... ...+..++........ ......-..+.++-..|
T Consensus 255 ~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~-------~~~~~~i~~~~~~~~~-~~~~~~~~~~~~li~~~ 326 (373)
T 2x4f_A 255 LAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND-------AETLNNILACRWDLED-EEFQDISEEAKEFISKL 326 (373)
T ss_dssp CCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSH-------HHHHHHHHHTCCCSCS-GGGTTSCHHHHHHHHTT
T ss_pred eChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhccCCCCh-hhhccCCHHHHHHHHHH
Confidence 468877777788999999999999999999999532110 0011122221111100 00001112355678899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|++||++.|++
T Consensus 327 L~~dp~~Rps~~e~l 341 (373)
T 2x4f_A 327 LIKEKSWRISASEAL 341 (373)
T ss_dssp SCSSGGGSCCHHHHH
T ss_pred cCCChhhCCCHHHHh
Confidence 999999999998863
No 271
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=97.70 E-value=3.8e-06 Score=81.70 Aligned_cols=86 Identities=21% Similarity=0.200 Sum_probs=51.7
Q ss_pred CCchhcccccc-cccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVV-TEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~-~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||....... +.++|||||||+++|++||+.|...... ..................... -..+.++...
T Consensus 174 ~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~~~~~~~~~~~~~~~~---~~~~~~li~~ 244 (323)
T 3tki_A 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD------SCQEYSDWKEKKTYLNPWKKI---DSAPLALLHK 244 (323)
T ss_dssp SCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCT------TSHHHHHHHTTCTTSTTGGGS---CHHHHHHHHH
T ss_pred cCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCch------HHHHHHHHhcccccCCccccC---CHHHHHHHHH
Confidence 35676654443 7789999999999999999999542111 000011111111110000111 1234567889
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||++.||+
T Consensus 245 ~L~~dP~~R~t~~eil 260 (323)
T 3tki_A 245 ILVENPSARITIPDIK 260 (323)
T ss_dssp HSCSSTTTSCCHHHHT
T ss_pred HccCChhhCcCHHHHh
Confidence 9999999999999874
No 272
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=97.70 E-value=1.6e-06 Score=83.20 Aligned_cols=85 Identities=19% Similarity=0.241 Sum_probs=52.0
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++||||+|++++|++||+.|.... ....+ ....+......... ... ...+.++...|
T Consensus 199 ~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~-----~~~~~-~~~~~~~~~~~~~~-~~~---~~~l~~li~~~ 268 (298)
T 3f66_A 199 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-----VNTFD-ITVYLLQGRRLLQP-EYC---PDPLYEVMLKC 268 (298)
T ss_dssp SCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT-----SCTTT-HHHHHHTTCCCCCC-TTC---CHHHHHHHHHH
T ss_pred cChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCcc-----CCHHH-HHHHHhcCCCCCCC-ccC---CHHHHHHHHHH
Confidence 4577777777889999999999999999966652110 00000 01111111110000 111 12356778899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|++||++.||+
T Consensus 269 l~~~p~~Rps~~ell 283 (298)
T 3f66_A 269 WHPKAEMRPSFSELV 283 (298)
T ss_dssp TCSSGGGSCCHHHHH
T ss_pred cCCChhhCcCHHHHH
Confidence 999999999998863
No 273
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=97.70 E-value=2.2e-06 Score=83.25 Aligned_cols=87 Identities=16% Similarity=0.145 Sum_probs=53.6
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++||||||++++|++||+.|...... ......+.......+. ......-..+.++...|
T Consensus 185 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~~~~~i~~~~~~~~~-~~~~~~~~~~~~li~~~ 256 (321)
T 2a2a_A 185 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK-------QETLANITSVSYDFDE-EFFSHTSELAKDFIRKL 256 (321)
T ss_dssp CCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH-------HHHHHHHHTTCCCCCH-HHHTTCCHHHHHHHHTT
T ss_pred cCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH-------HHHHHHHHhcccccCh-hhhcccCHHHHHHHHHH
Confidence 457777667788999999999999999999999532110 0001111111110000 00000112355778899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|++||++.|++
T Consensus 257 l~~dp~~Rps~~e~l 271 (321)
T 2a2a_A 257 LVKETRKRLTIQEAL 271 (321)
T ss_dssp SCSSTTTSCCHHHHH
T ss_pred cCCChhhCcCHHHHh
Confidence 999999999998863
No 274
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=97.70 E-value=1.1e-06 Score=86.05 Aligned_cols=84 Identities=23% Similarity=0.335 Sum_probs=53.5
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++||||||++++|++| |+.|...... . .+...+........... ....+.++...
T Consensus 226 ~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-------~-~~~~~~~~~~~~~~~~~---~~~~l~~li~~ 294 (334)
T 2pvf_A 226 MAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV-------E-ELFKLLKEGHRMDKPAN---CTNELYMMMRD 294 (334)
T ss_dssp CCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH-------H-HHHHHHHHTCCCCCCTT---CCHHHHHHHHH
T ss_pred eChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH-------H-HHHHHHhcCCCCCCCcc---CCHHHHHHHHH
Confidence 45777766778899999999999999999 9988542110 0 01111111100000011 12345577889
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|.+||++.||+
T Consensus 295 ~l~~dp~~Rps~~ell 310 (334)
T 2pvf_A 295 CWHAVPSQRPTFKQLV 310 (334)
T ss_dssp HTCSSGGGSCCHHHHH
T ss_pred HccCChhhCcCHHHHH
Confidence 9999999999999873
No 275
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=97.70 E-value=3.7e-06 Score=82.66 Aligned_cols=82 Identities=20% Similarity=0.318 Sum_probs=51.3
Q ss_pred CCchhcc---cccccccccccccceeeeehhcCCCCCccccccccccCCCccccccc---cCCCCCCcccchHHHHHHHH
Q 009771 432 LNGKLAH---TMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVL---DQRLSPPVNQKIVQDIILVS 505 (526)
Q Consensus 432 l~~~~~~---~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~---d~~l~~~~~~~~~~~~~~~~ 505 (526)
..||... ....+.++|||||||+++|++||+.|........ ....+. .+.... ....++ +.
T Consensus 217 ~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~-------~~~~~~~~~~~~~~~---~~~~~~---l~ 283 (348)
T 1u5q_A 217 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-------ALYHIAQNESPALQS---GHWSEY---FR 283 (348)
T ss_dssp CCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-------HHHHHHHSCCCCCCC---TTSCHH---HH
T ss_pred eCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-------HHHHHHhcCCCCCCC---CCCCHH---HH
Confidence 4567652 4567889999999999999999999953211100 001111 111111 111122 44
Q ss_pred HHHHhcCCCCCCCCCCccccC
Q 009771 506 TIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 506 ~la~~C~~~~p~~RP~m~~v~ 526 (526)
++...|++.+|++||++.|++
T Consensus 284 ~li~~~l~~dP~~Rps~~~ll 304 (348)
T 1u5q_A 284 NFVDSCLQKIPQDRPTSEVLL 304 (348)
T ss_dssp HHHHHHTCSSGGGSCCHHHHT
T ss_pred HHHHHHcccChhhCcCHHHHh
Confidence 667799999999999999874
No 276
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=97.69 E-value=6.6e-07 Score=86.03 Aligned_cols=92 Identities=20% Similarity=0.201 Sum_probs=55.1
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccc-cc---cccCCCc---cccccccCCCCCCcccchHHHHHHH
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSS-LS---SSSGPKI---MLINVLDQRLSPPVNQKIVQDIILV 504 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~-~~---~~~~~~~---~~~~~~d~~l~~~~~~~~~~~~~~~ 504 (526)
..||.......+.++||||+|++++|++||+.|...... +. ....... .....+......+.... ....+
T Consensus 196 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l 272 (302)
T 4e5w_A 196 YAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPN---CPDEV 272 (302)
T ss_dssp CCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCCCCCCTT---CCHHH
T ss_pred cCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccCCCCCCCC---CCHHH
Confidence 457877777788999999999999999999998432110 00 0000000 01111111111111011 12345
Q ss_pred HHHHHhcCCCCCCCCCCccccC
Q 009771 505 STIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 505 ~~la~~C~~~~p~~RP~m~~v~ 526 (526)
.++...|++.+|.+||++.||+
T Consensus 273 ~~li~~~l~~dp~~Rps~~~ll 294 (302)
T 4e5w_A 273 YQLMRKCWEFQPSNRTSFQNLI 294 (302)
T ss_dssp HHHHHHTTCSSGGGSCCHHHHH
T ss_pred HHHHHHHcCCCCCCCCCHHHHH
Confidence 6788899999999999999873
No 277
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=97.69 E-value=8.2e-06 Score=78.58 Aligned_cols=35 Identities=11% Similarity=0.084 Sum_probs=30.5
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.......+.++|||||||+++|++||+.|..
T Consensus 186 ~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~ 220 (308)
T 3g33_A 186 RAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFC 220 (308)
T ss_dssp CCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCC
T ss_pred cCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCC
Confidence 46787777778999999999999999999999953
No 278
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=97.69 E-value=7.1e-06 Score=81.79 Aligned_cols=35 Identities=17% Similarity=0.193 Sum_probs=30.7
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.......+.++|||||||+++|++||+.|..
T Consensus 225 ~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~ 259 (382)
T 2vx3_A 225 RSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFS 259 (382)
T ss_dssp CCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred cChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 56888777778999999999999999999999943
No 279
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=97.69 E-value=2.7e-06 Score=80.56 Aligned_cols=86 Identities=16% Similarity=0.247 Sum_probs=52.4
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.... ..+.++||||||++++|++||+.|...... ......+.......+. ......-..+.++...|
T Consensus 175 ~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~ 245 (277)
T 3f3z_A 175 VSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTD-------SEVMLKIREGTFTFPE-KDWLNVSPQAESLIRRL 245 (277)
T ss_dssp CCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHCCCCCCH-HHHTTSCHHHHHHHHHH
T ss_pred cChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCH-------HHHHHHHHhCCCCCCc-hhhhcCCHHHHHHHHHH
Confidence 45676543 478899999999999999999999542110 0001111111111110 00001123455778899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|++||++.|++
T Consensus 246 l~~dp~~R~s~~~~l 260 (277)
T 3f3z_A 246 LTKSPKQRITSLQAL 260 (277)
T ss_dssp TCSSTTTSCCHHHHT
T ss_pred ccCChhhCcCHHHHh
Confidence 999999999998874
No 280
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=97.68 E-value=1.8e-06 Score=84.53 Aligned_cols=89 Identities=16% Similarity=0.132 Sum_probs=45.9
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCcccccccc--CCCCCCcccchHHHHHHHHHHHH
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLD--QRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d--~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
..||.......+.++||||||++++|++||+.|........ ........+.. .....+.... .-..+.++..
T Consensus 196 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~li~ 269 (336)
T 3fhr_A 196 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQA---ISPGMKRRIRLGQYGFPNPEWSE---VSEDAKQLIR 269 (336)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHSSCCC------------------------CCCTTTSTT---CCHHHHHHHH
T ss_pred cChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchh---hhhhHHHhhhccccccCchhhcc---CCHHHHHHHH
Confidence 45676666677889999999999999999999954221110 00000000000 0011000011 1223556778
Q ss_pred hcCCCCCCCCCCccccC
Q 009771 510 ACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v~ 526 (526)
.|++.+|++||++.||+
T Consensus 270 ~~L~~dP~~Rpt~~ell 286 (336)
T 3fhr_A 270 LLLKTDPTERLTITQFM 286 (336)
T ss_dssp HHSCSSGGGSCCHHHHH
T ss_pred HHCCCChhHCcCHHHHh
Confidence 99999999999998863
No 281
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=97.68 E-value=1.6e-06 Score=81.81 Aligned_cols=82 Identities=18% Similarity=0.233 Sum_probs=51.0
Q ss_pred CCchhcccccc-cccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVV-TEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~-~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||....... +.++||||+||++.||+||+.|...-. . ......+......-+ ....++ +.++-..
T Consensus 178 ~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~------~-~~~~~~i~~~~~~~p--~~~s~~---~~~li~~ 245 (275)
T 3hyh_A 178 AAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES------I-PVLFKNISNGVYTLP--KFLSPG---AAGLIKR 245 (275)
T ss_dssp SCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS------H-HHHHHHHHHTCCCCC--TTSCHH---HHHHHHH
T ss_pred CChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC------H-HHHHHHHHcCCCCCC--CCCCHH---HHHHHHH
Confidence 45777665543 578999999999999999999954210 0 000111212111111 111123 3456678
Q ss_pred cCCCCCCCCCCcccc
Q 009771 511 CLSSQPKSRPTMQRI 525 (526)
Q Consensus 511 C~~~~p~~RP~m~~v 525 (526)
|++.+|++|||+.|+
T Consensus 246 ~L~~dP~~R~s~~ei 260 (275)
T 3hyh_A 246 MLIVNPLNRISIHEI 260 (275)
T ss_dssp HSCSSGGGSCCHHHH
T ss_pred HccCChhHCcCHHHH
Confidence 999999999999886
No 282
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=97.68 E-value=4.5e-06 Score=80.60 Aligned_cols=86 Identities=16% Similarity=0.295 Sum_probs=54.1
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++||||||++++|++||+.|.......... ........+....+ ... -..+.++...|
T Consensus 192 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~----~~~~~~~~~~~~~~--~~~---~~~l~~li~~~ 262 (314)
T 3com_A 192 MAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAI----FMIPTNPPPTFRKP--ELW---SDNFTDFVKQC 262 (314)
T ss_dssp CCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHH----HHHHHSCCCCCSSG--GGS---CHHHHHHHHHH
T ss_pred cChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHH----HHHhcCCCcccCCc--ccC---CHHHHHHHHHH
Confidence 4577777677889999999999999999999995432111000 00000001111100 111 12355778899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|.+||++.||+
T Consensus 263 l~~dp~~Rpt~~~ll 277 (314)
T 3com_A 263 LVKSPEQRATATQLL 277 (314)
T ss_dssp TCSCTTTSCCHHHHT
T ss_pred ccCChhhCcCHHHHH
Confidence 999999999999874
No 283
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=97.68 E-value=1.8e-06 Score=82.25 Aligned_cols=83 Identities=22% Similarity=0.262 Sum_probs=54.0
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++||||||++++|++| |+.|...... ....+.+............ ...+.++...
T Consensus 179 ~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~~---~~~l~~li~~ 247 (288)
T 3kfa_A 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--------SQVYELLEKDYRMERPEGC---PEKVYELMRA 247 (288)
T ss_dssp CCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG--------GGHHHHHHTTCCCCCCTTC---CHHHHHHHHH
T ss_pred CChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHhccCCCCCCCCC---CHHHHHHHHH
Confidence 56787777778899999999999999999 8888542110 0111111111111110111 2345677889
Q ss_pred cCCCCCCCCCCcccc
Q 009771 511 CLSSQPKSRPTMQRI 525 (526)
Q Consensus 511 C~~~~p~~RP~m~~v 525 (526)
|++.+|.+||++.||
T Consensus 248 ~l~~dp~~Rps~~~~ 262 (288)
T 3kfa_A 248 CWQWNPSDRPSFAEI 262 (288)
T ss_dssp HTCSSGGGSCCHHHH
T ss_pred HhCCChhhCcCHHHH
Confidence 999999999999886
No 284
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=97.67 E-value=2e-06 Score=83.19 Aligned_cols=86 Identities=21% Similarity=0.279 Sum_probs=53.9
Q ss_pred CCCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHH
Q 009771 431 SLNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 431 ~l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
...||.......+.++||||||++++|++| |+.|...... .. .....+............ -..+.++..
T Consensus 216 y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~------~~-~~~~~~~~~~~~~~~~~~---~~~l~~li~ 285 (316)
T 2xir_A 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI------DE-EFCRRLKEGTRMRAPDYT---TPEMYQTML 285 (316)
T ss_dssp GCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCC------SH-HHHHHHHHTCCCCCCTTC---CHHHHHHHH
T ss_pred ecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccch------hH-HHHHHhccCccCCCCCCC---CHHHHHHHH
Confidence 356787777778899999999999999998 9988532110 00 011111111000000111 123556778
Q ss_pred hcCCCCCCCCCCccccC
Q 009771 510 ACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v~ 526 (526)
.|++.+|.+||++.||+
T Consensus 286 ~~l~~dp~~Rps~~ell 302 (316)
T 2xir_A 286 DCWHGEPSQRPTFSELV 302 (316)
T ss_dssp HHTCSSGGGSCCHHHHH
T ss_pred HHcCCChhhCcCHHHHH
Confidence 99999999999999873
No 285
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=97.67 E-value=1.6e-06 Score=82.85 Aligned_cols=84 Identities=19% Similarity=0.290 Sum_probs=53.6
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++||||||++++|++| |+.|....... .....+.......+.... ....+.++...
T Consensus 191 ~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~~~~---~~~~l~~li~~ 260 (291)
T 1u46_A 191 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS-------QILHKIDKEGERLPRPED---CPQDIYNVMVQ 260 (291)
T ss_dssp CCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-------HHHHHHHTSCCCCCCCTT---CCHHHHHHHHH
T ss_pred eCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH-------HHHHHHHccCCCCCCCcC---cCHHHHHHHHH
Confidence 46787776778899999999999999999 99985421100 001111111111000011 12345577889
Q ss_pred cCCCCCCCCCCcccc
Q 009771 511 CLSSQPKSRPTMQRI 525 (526)
Q Consensus 511 C~~~~p~~RP~m~~v 525 (526)
|++.+|++||++.||
T Consensus 261 ~l~~~p~~Rps~~~l 275 (291)
T 1u46_A 261 CWAHKPEDRPTFVAL 275 (291)
T ss_dssp HTCSSGGGSCCHHHH
T ss_pred HccCCcccCcCHHHH
Confidence 999999999999886
No 286
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=97.67 E-value=3.1e-06 Score=83.79 Aligned_cols=88 Identities=15% Similarity=0.138 Sum_probs=54.3
Q ss_pred CCCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 431 SLNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 431 ~l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
...||.......+.++|||||||+++|++||+.|...... ......+.......+. ......-..+.++...
T Consensus 196 y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~-------~~~~~~i~~~~~~~~~-~~~~~~~~~~~~li~~ 267 (362)
T 2bdw_A 196 YLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ-------HRLYAQIKAGAYDYPS-PEWDTVTPEAKSLIDS 267 (362)
T ss_dssp TCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHTCCCCCT-TGGGGSCHHHHHHHHH
T ss_pred ccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-------HHHHHHHHhCCCCCCc-ccccCCCHHHHHHHHH
Confidence 3568877777788999999999999999999999532110 0001111111111000 0000111234567789
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||++.|++
T Consensus 268 ~L~~dP~~R~t~~e~l 283 (362)
T 2bdw_A 268 MLTVNPKKRITADQAL 283 (362)
T ss_dssp HSCSSGGGSCCHHHHT
T ss_pred HcCCChhhCcCHHHHh
Confidence 9999999999998874
No 287
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=97.67 E-value=1.8e-06 Score=81.97 Aligned_cols=83 Identities=20% Similarity=0.320 Sum_probs=53.4
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++||||||++++|+++|+.|...... ......+.......+ .... ..+.++...|
T Consensus 174 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~~~~~~~--~~~~---~~~~~li~~~ 241 (279)
T 3fdn_A 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY-------QETYKRISRVEFTFP--DFVT---EGARDLISRL 241 (279)
T ss_dssp CCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH-------HHHHHHHHHTCCCCC--TTSC---HHHHHHHHHH
T ss_pred cCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcH-------HHHHHHHHhCCCCCC--CcCC---HHHHHHHHHH
Confidence 457877777788899999999999999999999542110 000111111111111 1111 2344678899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|++||++.||+
T Consensus 242 l~~~p~~Rps~~e~l 256 (279)
T 3fdn_A 242 LKHNPSQRPMLREVL 256 (279)
T ss_dssp CCSSGGGSCCHHHHH
T ss_pred hccChhhCCCHHHHh
Confidence 999999999999873
No 288
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=97.67 E-value=2e-06 Score=82.54 Aligned_cols=82 Identities=11% Similarity=0.240 Sum_probs=53.3
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|+||+||++.||+||+.|...-. .......++.....-+ ....++ +..+-..|
T Consensus 201 mAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~-------~~~~~~~i~~~~~~~p--~~~s~~---~~dli~~l 268 (311)
T 4aw0_A 201 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN-------EGLIFAKIIKLEYDFP--EKFFPK---ARDLVEKL 268 (311)
T ss_dssp CCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSS-------HHHHHHHHHHTCCCCC--TTCCHH---HHHHHHHH
T ss_pred CCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-------HHHHHHHHHcCCCCCC--cccCHH---HHHHHHHH
Confidence 45887777778899999999999999999999953210 0001112222222111 111122 34566789
Q ss_pred CCCCCCCCCCcccc
Q 009771 512 LSSQPKSRPTMQRI 525 (526)
Q Consensus 512 ~~~~p~~RP~m~~v 525 (526)
++.+|++||++.|+
T Consensus 269 L~~dp~~R~t~~e~ 282 (311)
T 4aw0_A 269 LVLDATKRLGCEEM 282 (311)
T ss_dssp SCSSGGGSTTSGGG
T ss_pred ccCCHhHCcChHHH
Confidence 99999999999885
No 289
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=97.67 E-value=4.5e-06 Score=83.78 Aligned_cols=91 Identities=18% Similarity=0.173 Sum_probs=54.7
Q ss_pred CCCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 431 SLNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 431 ~l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
...||.......+.++|||||||+++|++||+.|........ ........+.......+. ......-.++.++-..
T Consensus 229 y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~~~~~~~~i~~~~~~~~~-~~~~~~s~~~~~li~~ 304 (400)
T 1nxk_A 229 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA---ISPGMKTRIRMGQYEFPN-PEWSEVSEEVKMLIRN 304 (400)
T ss_dssp TCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCS---SCCSHHHHHHHTCCCCCT-TTTTTSCHHHHHHHHT
T ss_pred ccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCcccc---ccHHHHHHHHcCcccCCC-cccccCCHHHHHHHHH
Confidence 356787777788899999999999999999999954321110 000001111111110000 0000111235577889
Q ss_pred cCCCCCCCCCCcccc
Q 009771 511 CLSSQPKSRPTMQRI 525 (526)
Q Consensus 511 C~~~~p~~RP~m~~v 525 (526)
|++.+|++||++.||
T Consensus 305 ~L~~dP~~Rpt~~ei 319 (400)
T 1nxk_A 305 LLKTEPTQRMTITEF 319 (400)
T ss_dssp TSCSSGGGSCCHHHH
T ss_pred HCCCChhHCcCHHHH
Confidence 999999999999886
No 290
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=97.66 E-value=6.3e-06 Score=79.01 Aligned_cols=85 Identities=18% Similarity=0.197 Sum_probs=50.7
Q ss_pred CCchhccccc---ccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHH
Q 009771 432 LNGKLAHTMV---VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIA 508 (526)
Q Consensus 432 l~~~~~~~~~---~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la 508 (526)
..||...... .+.++|||||||+++|++||+.|....... .....+.......+...... ..+.++.
T Consensus 204 ~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-------~~~~~~~~~~~~~~~~~~~~---~~l~~li 273 (298)
T 2zv2_A 204 MAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIM-------CLHSKIKSQALEFPDQPDIA---EDLKDLI 273 (298)
T ss_dssp CCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHCCCCCCSSSCCC---HHHHHHH
T ss_pred cChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHH-------HHHHHHhcccCCCCCccccC---HHHHHHH
Confidence 3466554333 367899999999999999999995421100 00111111111111101111 2355678
Q ss_pred HhcCCCCCCCCCCccccC
Q 009771 509 FACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 509 ~~C~~~~p~~RP~m~~v~ 526 (526)
..|++.+|++||++.||+
T Consensus 274 ~~~l~~dp~~R~s~~e~l 291 (298)
T 2zv2_A 274 TRMLDKNPESRIVVPEIK 291 (298)
T ss_dssp HHHTCSCTTTSCCHHHHT
T ss_pred HHHhhcChhhCCCHHHHh
Confidence 899999999999999874
No 291
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=97.66 E-value=9.8e-07 Score=85.95 Aligned_cols=92 Identities=17% Similarity=0.213 Sum_probs=55.8
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCcccc-ccccc--cCCC-c----cccccccCCCCCCcccchHHHHHH
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLS-SLSSS--SGPK-I----MLINVLDQRLSPPVNQKIVQDIIL 503 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~-~~~~~--~~~~-~----~~~~~~d~~l~~~~~~~~~~~~~~ 503 (526)
..||.......+.++||||||++++|++||+.|..... .+... .... . .+.+.+......+... .....
T Consensus 215 ~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 291 (326)
T 2w1i_A 215 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD---GCPDE 291 (326)
T ss_dssp CCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCT---TCCHH
T ss_pred ECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCCCCCCC---cccHH
Confidence 45777766778899999999999999999998854211 11000 0000 0 0112222211111101 12234
Q ss_pred HHHHHHhcCCCCCCCCCCccccC
Q 009771 504 VSTIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 504 ~~~la~~C~~~~p~~RP~m~~v~ 526 (526)
+.++...|++.+|++||++.||+
T Consensus 292 l~~li~~cl~~dP~~Rps~~el~ 314 (326)
T 2w1i_A 292 IYMIMTECWNNNVNQRPSFRDLA 314 (326)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHH
T ss_pred HHHHHHHHcCCChhhCcCHHHHH
Confidence 66788899999999999999873
No 292
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=97.66 E-value=1.9e-06 Score=83.99 Aligned_cols=85 Identities=24% Similarity=0.247 Sum_probs=53.8
Q ss_pred CCCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHH
Q 009771 431 SLNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 431 ~l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
...||.......+.++||||||++++|++| |+.|....... ...+.+............ -..+.++..
T Consensus 207 y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~--------~~~~~~~~~~~~~~~~~~---~~~l~~li~ 275 (327)
T 1fvr_A 207 WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--------ELYEKLPQGYRLEKPLNC---DDEVYDLMR 275 (327)
T ss_dssp TCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--------HHHHHGGGTCCCCCCTTB---CHHHHHHHH
T ss_pred ccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH--------HHHHHhhcCCCCCCCCCC---CHHHHHHHH
Confidence 356787776778899999999999999998 99985321100 011111111110000111 123557788
Q ss_pred hcCCCCCCCCCCccccC
Q 009771 510 ACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v~ 526 (526)
.|++.+|++||++.|++
T Consensus 276 ~~l~~dp~~Rps~~ell 292 (327)
T 1fvr_A 276 QCWREKPYERPSFAQIL 292 (327)
T ss_dssp HHTCSSGGGSCCHHHHH
T ss_pred HHccCChhhCcCHHHHH
Confidence 99999999999998863
No 293
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=97.65 E-value=1.7e-06 Score=83.97 Aligned_cols=84 Identities=27% Similarity=0.337 Sum_probs=53.5
Q ss_pred CCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++||||||++++|++| |+.|...... ......+......... ... ...+.++...
T Consensus 207 ~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-------~~~~~~~~~~~~~~~~-~~~---~~~l~~li~~ 275 (322)
T 1p4o_A 207 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN-------EQVLRFVMEGGLLDKP-DNC---PDMLFELMRM 275 (322)
T ss_dssp CCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH-------HHHHHHHHTTCCCCCC-TTC---CHHHHHHHHH
T ss_pred cChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH-------HHHHHHHHcCCcCCCC-CCC---CHHHHHHHHH
Confidence 46787776778899999999999999999 7887532110 0001111111111111 111 2235567889
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||++.||+
T Consensus 276 ~l~~dp~~Rps~~e~l 291 (322)
T 1p4o_A 276 CWQYNPKMRPSFLEII 291 (322)
T ss_dssp HTCSSGGGSCCHHHHH
T ss_pred HcCCCcccCcCHHHHH
Confidence 9999999999998863
No 294
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=97.65 E-value=5.4e-06 Score=81.42 Aligned_cols=35 Identities=20% Similarity=0.287 Sum_probs=30.2
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.......+.++|||||||+++|++||+.|..
T Consensus 206 ~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~ 240 (355)
T 2eu9_A 206 RPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQ 240 (355)
T ss_dssp CCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred cCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCC
Confidence 45777766778899999999999999999999954
No 295
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=97.65 E-value=3.1e-06 Score=82.78 Aligned_cols=77 Identities=14% Similarity=0.286 Sum_probs=51.4
Q ss_pred CCchhcccccc-cccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVV-TEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~-~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||....... +.++|||||||+++|++||+.|....... +......+. . ..+ .+.++...
T Consensus 196 ~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-------------~~~~~~~~~-~-~~~---~l~~li~~ 257 (335)
T 3dls_A 196 CAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET-------------VEAAIHPPY-L-VSK---ELMSLVSG 257 (335)
T ss_dssp CCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG-------------TTTCCCCSS-C-CCH---HHHHHHHH
T ss_pred cChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH-------------HhhccCCCc-c-cCH---HHHHHHHH
Confidence 45676655444 77899999999999999999996432211 111111111 1 112 24567778
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||++.||+
T Consensus 258 ~L~~dP~~Rps~~ell 273 (335)
T 3dls_A 258 LLQPVPERRTTLEKLV 273 (335)
T ss_dssp HTCSSGGGSCCHHHHH
T ss_pred HccCChhhCcCHHHHh
Confidence 9999999999998863
No 296
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=97.65 E-value=5.8e-06 Score=80.80 Aligned_cols=83 Identities=20% Similarity=0.237 Sum_probs=50.8
Q ss_pred CCchhcccccc-cccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVV-TEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~-~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||....... +.++|||||||+++|++||+.|.+... .+. ....+.......+ .... ..+.++...
T Consensus 174 ~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~------~~~-~~~~i~~~~~~~p--~~~s---~~~~~li~~ 241 (336)
T 3h4j_B 174 AAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEF------IPN-LFKKVNSCVYVMP--DFLS---PGAQSLIRR 241 (336)
T ss_dssp SCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSS------STT-CBCCCCSSCCCCC--TTSC---HHHHHHHHT
T ss_pred CCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCcc------HHH-HHHHHHcCCCCCc--ccCC---HHHHHHHHH
Confidence 45666554443 678999999999999999999954211 000 0111111111000 1111 234567789
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|.+||++.|++
T Consensus 242 ~L~~dP~~Rpt~~eil 257 (336)
T 3h4j_B 242 MIVADPMQRITIQEIR 257 (336)
T ss_dssp TSCSSGGGSCCHHHHT
T ss_pred HcCCChhHCcCHHHHH
Confidence 9999999999999874
No 297
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=97.65 E-value=2.2e-06 Score=81.19 Aligned_cols=83 Identities=18% Similarity=0.208 Sum_probs=49.4
Q ss_pred CCchhcccccc-cccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVV-TEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~-~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||....... +.++||||||++++|++||+.|...... ......+.......+ .... ..+.++...
T Consensus 178 ~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~~~~~~~~~~~~~~--~~~~---~~~~~li~~ 245 (275)
T 2eue_A 178 AAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI-------PVLFKNISNGVYTLP--KFLS---PGAAGLIKR 245 (275)
T ss_dssp CCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHTCCCCC--TTSC---HHHHHHHHH
T ss_pred CCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCCCCCC--ccCC---HHHHHHHHH
Confidence 45666554433 6889999999999999999999542110 000111111111101 1111 234567889
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||++.|++
T Consensus 246 ~l~~dP~~Rps~~e~l 261 (275)
T 2eue_A 246 MLIVNPLNRISIHEIM 261 (275)
T ss_dssp HSCSSGGGSCCHHHHT
T ss_pred HhhcCHhHCCCHHHHh
Confidence 9999999999999874
No 298
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=97.65 E-value=1.3e-06 Score=83.92 Aligned_cols=88 Identities=22% Similarity=0.367 Sum_probs=51.7
Q ss_pred CCchhccc-ccccccccccccceeeeehhcCCCCCcccccccc-----ccCCCccccccccCCCCCCcccchHHHHHHHH
Q 009771 432 LNGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPGELLSSLSS-----SSGPKIMLINVLDQRLSPPVNQKIVQDIILVS 505 (526)
Q Consensus 432 l~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~-----~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ 505 (526)
..||.... ...+.++||||||++++|++||+.|......... ...+........++... ... -..+.
T Consensus 193 ~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~ 265 (303)
T 2vwi_A 193 MAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEML----KKY---GKSFR 265 (303)
T ss_dssp CCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-----CCC----CCC---CHHHH
T ss_pred cCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccccccccchhh----hhh---hHHHH
Confidence 45776543 3568899999999999999999999543211100 00000000001111111 111 12355
Q ss_pred HHHHhcCCCCCCCCCCccccC
Q 009771 506 TIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 506 ~la~~C~~~~p~~RP~m~~v~ 526 (526)
++...|++.+|.+||++.||+
T Consensus 266 ~li~~~l~~dp~~Rps~~~ll 286 (303)
T 2vwi_A 266 KMISLCLQKDPEKRPTAAELL 286 (303)
T ss_dssp HHHHHHCCSSGGGSCCHHHHH
T ss_pred HHHHHHccCChhhCcCHHHHh
Confidence 678899999999999999873
No 299
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=97.64 E-value=9.1e-06 Score=80.64 Aligned_cols=35 Identities=20% Similarity=0.206 Sum_probs=30.4
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.......+.++|||||||+++|++||+.|..
T Consensus 193 ~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 227 (371)
T 2xrw_A 193 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFP 227 (371)
T ss_dssp CCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred cCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence 46787777778899999999999999999999953
No 300
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=97.64 E-value=1.2e-06 Score=85.57 Aligned_cols=89 Identities=12% Similarity=0.092 Sum_probs=54.4
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|||||||+++|++||+.|....... ........+.+.....+. ....+....+.++...|
T Consensus 184 ~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~----~~~~~~~~i~~~~~~~~~-~~~~~~~p~~~~li~~~ 258 (330)
T 2izr_A 184 MSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKAD----TLKERYQKIGDTKRATPI-EVLCENFPEMATYLRYV 258 (330)
T ss_dssp CCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCS----SHHHHHHHHHHHHHHSCH-HHHTTTCHHHHHHHHHH
T ss_pred cChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccc----cHHHHHHHHHhhhccCCH-HHHhccChHHHHHHHHH
Confidence 4578777777889999999999999999999995432100 000001111111110000 00000011677888899
Q ss_pred CCCCCCCCCCcccc
Q 009771 512 LSSQPKSRPTMQRI 525 (526)
Q Consensus 512 ~~~~p~~RP~m~~v 525 (526)
++.+|.+||++.+|
T Consensus 259 l~~~p~~RP~~~~l 272 (330)
T 2izr_A 259 RRLDFFEKPDYDYL 272 (330)
T ss_dssp HHCCTTCCCCHHHH
T ss_pred HhCCCCCCCCHHHH
Confidence 99999999999876
No 301
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=97.63 E-value=3.9e-06 Score=80.18 Aligned_cols=86 Identities=13% Similarity=0.247 Sum_probs=51.1
Q ss_pred CCchhcccc--cccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHH
Q 009771 432 LNGKLAHTM--VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 432 l~~~~~~~~--~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
..||..... ..+.++||||||++++|++||+.|............ . .......+.+. .... ..+.++..
T Consensus 190 ~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~-~-~~~~~~~~~~~----~~~~---~~~~~li~ 260 (295)
T 2clq_A 190 MAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMF-K-VGMFKVHPEIP----ESMS---AEAKAFIL 260 (295)
T ss_dssp CCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHH-H-HHHHCCCCCCC----TTSC---HHHHHHHH
T ss_pred cChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHH-h-hcccccccccc----ccCC---HHHHHHHH
Confidence 346665432 367899999999999999999999542111000000 0 00000111121 1111 23456778
Q ss_pred hcCCCCCCCCCCccccC
Q 009771 510 ACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v~ 526 (526)
.|++.+|++||++.|++
T Consensus 261 ~~l~~dp~~Rps~~~ll 277 (295)
T 2clq_A 261 KCFEPDPDKRACANDLL 277 (295)
T ss_dssp HTTCSSTTTSCCHHHHH
T ss_pred HHccCChhhCCCHHHHh
Confidence 99999999999998863
No 302
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=97.62 E-value=2.2e-06 Score=82.17 Aligned_cols=79 Identities=22% Similarity=0.318 Sum_probs=51.2
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|+||+||++.||+||+.|..... .......+.......+ .....+ +..+-..|
T Consensus 193 mAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~-------~~~~~~~i~~~~~~~p--~~~s~~---~~~li~~~ 260 (304)
T 3ubd_A 193 MAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD-------RKETMTMILKAKLGMP--QFLSPE---AQSLLRML 260 (304)
T ss_dssp CCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-------HHHHHHHHHHCCCCCC--TTSCHH---HHHHHHHH
T ss_pred CCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcC-------HHHHHHHHHcCCCCCC--CcCCHH---HHHHHHHH
Confidence 46888777788999999999999999999999954210 0001112222222111 111123 34566789
Q ss_pred CCCCCCCCCCc
Q 009771 512 LSSQPKSRPTM 522 (526)
Q Consensus 512 ~~~~p~~RP~m 522 (526)
++.+|++||+.
T Consensus 261 L~~dP~~R~ta 271 (304)
T 3ubd_A 261 FKRNPANRLGA 271 (304)
T ss_dssp TCSSGGGSTTC
T ss_pred cccCHHHCCCC
Confidence 99999999985
No 303
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=97.62 E-value=7.7e-06 Score=83.05 Aligned_cols=88 Identities=19% Similarity=0.191 Sum_probs=53.4
Q ss_pred CCchhccc-------ccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHH
Q 009771 432 LNGKLAHT-------MVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIIL 503 (526)
Q Consensus 432 l~~~~~~~-------~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ 503 (526)
..||.... ...+.++|||||||+++|++| |+.|........ ........+..-... ........+
T Consensus 199 ~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~-----~~i~~~~~~~~~~~~--~~~~~~~~~ 271 (434)
T 2rio_A 199 RAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE-----SNIIRGIFSLDEMKC--LHDRSLIAE 271 (434)
T ss_dssp SCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH-----HHHHHTCCCCCCCTT--CCCHHHHHH
T ss_pred cCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH-----HHHhcCCCCcccccc--cccccchHH
Confidence 45665533 567899999999999999999 899853211000 000011111000000 111223355
Q ss_pred HHHHHHhcCCCCCCCCCCccccC
Q 009771 504 VSTIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 504 ~~~la~~C~~~~p~~RP~m~~v~ 526 (526)
+.++...|++.+|++||+|.||+
T Consensus 272 ~~~li~~~L~~dP~~Rps~~eil 294 (434)
T 2rio_A 272 ATDLISQMIDHDPLKRPTAMKVL 294 (434)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHH
T ss_pred HHHHHHHHhhCChhhCCCHHHHH
Confidence 67888999999999999999873
No 304
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=97.62 E-value=3.2e-06 Score=81.29 Aligned_cols=84 Identities=15% Similarity=0.202 Sum_probs=52.1
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCC--CCcccchHHHHHHHHHHHH
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLS--PPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~--~~~~~~~~~~~~~~~~la~ 509 (526)
..||.......+.++||||+|++++|++||+.|...... ......+...... .+..... -..+.++-.
T Consensus 174 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~~~~~i~~~~~~~~~~~~~~~---~~~~~~li~ 243 (304)
T 2jam_A 174 VAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE-------SKLFEKIKEGYYEFESPFWDDI---SESAKDFIC 243 (304)
T ss_dssp CCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH-------HHHHHHHHHCCCCCCTTTTTTS---CHHHHHHHH
T ss_pred cChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-------HHHHHHHHcCCCCCCccccccC---CHHHHHHHH
Confidence 456766666778899999999999999999999532110 0001111111110 0000111 123556788
Q ss_pred hcCCCCCCCCCCcccc
Q 009771 510 ACLSSQPKSRPTMQRI 525 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v 525 (526)
.|++.+|++||++.|+
T Consensus 244 ~~l~~dp~~Rps~~~~ 259 (304)
T 2jam_A 244 HLLEKDPNERYTCEKA 259 (304)
T ss_dssp HHHCSSTTTSCCHHHH
T ss_pred HHcCCChhHCcCHHHH
Confidence 9999999999999886
No 305
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=97.62 E-value=4.7e-06 Score=79.99 Aligned_cols=83 Identities=19% Similarity=0.190 Sum_probs=47.0
Q ss_pred ccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhcCCCCCCCC
Q 009771 440 MVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 519 (526)
Q Consensus 440 ~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 519 (526)
...+.++|||||||+++|++||+.|........ ........+.......+. ......-..+.++...|++.+|++|
T Consensus 173 ~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dP~~R 248 (299)
T 3m2w_A 173 EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA---ISPGMKTRIRMGQYEFPN-PEWSEVSEEVKMLIRNLLKTEPTQR 248 (299)
T ss_dssp CGGGGHHHHHHHHHHHHHHHHSSCSCCC----------CCSCCSSCTTCCSSCH-HHHTTSCHHHHHHHHHHTCSSTTTS
T ss_pred ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchh---hhHHHHHHHhhccccCCc-hhcccCCHHHHHHHHHHcccChhhC
Confidence 356789999999999999999999954221110 000000001001110000 0000112345677889999999999
Q ss_pred CCccccC
Q 009771 520 PTMQRIS 526 (526)
Q Consensus 520 P~m~~v~ 526 (526)
|++.||+
T Consensus 249 ps~~e~l 255 (299)
T 3m2w_A 249 MTITEFM 255 (299)
T ss_dssp CCHHHHH
T ss_pred CCHHHHh
Confidence 9998873
No 306
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=97.61 E-value=9.2e-06 Score=78.69 Aligned_cols=86 Identities=12% Similarity=0.103 Sum_probs=50.6
Q ss_pred cccccccccccccceeeeehhcCCCCCccccccc---------cccCCCcccccc---------ccCCCCCCcccchHHH
Q 009771 439 TMVVTEKCDVYSFGVVALEILMGRHPGELLSSLS---------SSSGPKIMLINV---------LDQRLSPPVNQKIVQD 500 (526)
Q Consensus 439 ~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~---------~~~~~~~~~~~~---------~d~~l~~~~~~~~~~~ 500 (526)
....+.++|||||||+++|++||+.|........ ....+......+ .++.+.... ......
T Consensus 197 ~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 275 (319)
T 4euu_A 197 QKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSC-SLSRGL 275 (319)
T ss_dssp CCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTC-SSCHHH
T ss_pred cCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCccc-ccchhH
Confidence 3567889999999999999999999943211000 000010000000 011111111 122333
Q ss_pred HHHHHHHHHhcCCCCCCCCCCcccc
Q 009771 501 IILVSTIAFACLSSQPKSRPTMQRI 525 (526)
Q Consensus 501 ~~~~~~la~~C~~~~p~~RP~m~~v 525 (526)
-..+..+-..|++.+|++||++.|+
T Consensus 276 ~~~l~~ll~~~L~~dP~~R~s~~el 300 (319)
T 4euu_A 276 QVLLTPVLANILEADQEKCWGFDQF 300 (319)
T ss_dssp HHHHHHHHHHHSCCCTTTSCCHHHH
T ss_pred HHHhHHHHHHhccCChhhhccHHHh
Confidence 4456678899999999999999886
No 307
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=97.61 E-value=4.3e-06 Score=80.92 Aligned_cols=86 Identities=19% Similarity=0.331 Sum_probs=50.7
Q ss_pred CCchhcccc---cccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHH
Q 009771 432 LNGKLAHTM---VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIA 508 (526)
Q Consensus 432 l~~~~~~~~---~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la 508 (526)
..||..... ..+.++||||||++++|++||+.|........ . .....+......+..... -..+.++.
T Consensus 210 ~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~---~~~l~~li 280 (317)
T 2buj_A 210 RAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKG-----D-SVALAVQNQLSIPQSPRH---SSALWQLL 280 (317)
T ss_dssp CCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTT-----S-CHHHHHHCC--CCCCTTS---CHHHHHHH
T ss_pred CCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhccc-----c-hhhHHhhccCCCCccccC---CHHHHHHH
Confidence 345554322 35789999999999999999999954311100 0 011111111111100111 12455778
Q ss_pred HhcCCCCCCCCCCccccC
Q 009771 509 FACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 509 ~~C~~~~p~~RP~m~~v~ 526 (526)
..|++.+|.+||++.||+
T Consensus 281 ~~~l~~dp~~Rps~~~ll 298 (317)
T 2buj_A 281 NSMMTVDPHQRPHIPLLL 298 (317)
T ss_dssp HHHTCSSGGGSCCHHHHH
T ss_pred HHHhhcChhhCCCHHHHH
Confidence 899999999999998863
No 308
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=97.61 E-value=3.1e-06 Score=80.56 Aligned_cols=83 Identities=19% Similarity=0.236 Sum_probs=53.6
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|+||||++++|++||+.|....... .....+.......+ ....+ .+.++...|
T Consensus 179 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~~~~~~~~~~~~~~--~~~~~---~~~~li~~~ 246 (284)
T 2vgo_A 179 LPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT-------ETHRRIVNVDLKFP--PFLSD---GSKDLISKL 246 (284)
T ss_dssp CCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-------HHHHHHHTTCCCCC--TTSCH---HHHHHHHHH
T ss_pred CCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh-------HHHHHHhccccCCC--CcCCH---HHHHHHHHH
Confidence 4577777777889999999999999999999995421100 00111111111111 11112 345678899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|.+||++.||+
T Consensus 247 l~~~p~~Rps~~~ll 261 (284)
T 2vgo_A 247 LRYHPPQRLPLKGVM 261 (284)
T ss_dssp SCSSGGGSCCHHHHH
T ss_pred hhcCHhhCCCHHHHh
Confidence 999999999998863
No 309
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=97.60 E-value=5.1e-06 Score=80.65 Aligned_cols=86 Identities=17% Similarity=0.125 Sum_probs=51.8
Q ss_pred CCchhc---ccccccccccccccceeeeehhcCCCCCccccccccccCCCccccc-cccCCCCCCcccchHHHHHHHHHH
Q 009771 432 LNGKLA---HTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLIN-VLDQRLSPPVNQKIVQDIILVSTI 507 (526)
Q Consensus 432 l~~~~~---~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~-~~d~~l~~~~~~~~~~~~~~~~~l 507 (526)
..||.. .....+.++|||||||+++|++||+.|...... .. .+.+ +......... .........+.++
T Consensus 183 ~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~l 254 (322)
T 2ycf_A 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT------QV-SLKDQITSGKYNFIP-EVWAEVSEKALDL 254 (322)
T ss_dssp CCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTC------SS-CHHHHHHHTCCCCCH-HHHTTSCHHHHHH
T ss_pred cCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch------HH-HHHHHHHhCccccCc-hhhhhcCHHHHHH
Confidence 456764 234567899999999999999999999542110 00 0111 1111110000 0000112345678
Q ss_pred HHhcCCCCCCCCCCcccc
Q 009771 508 AFACLSSQPKSRPTMQRI 525 (526)
Q Consensus 508 a~~C~~~~p~~RP~m~~v 525 (526)
...|++.+|++||++.|+
T Consensus 255 i~~~l~~dP~~Rps~~~~ 272 (322)
T 2ycf_A 255 VKKLLVVDPKARFTTEEA 272 (322)
T ss_dssp HHHHSCSSTTTSCCHHHH
T ss_pred HHHHcccCHhhCCCHHHH
Confidence 889999999999999886
No 310
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=97.60 E-value=5.9e-06 Score=79.27 Aligned_cols=83 Identities=18% Similarity=0.344 Sum_probs=51.6
Q ss_pred CCchhc-----ccccccccccccccceeeeehhcCCCCCccccccccccCCCcccccccc---CCCCCCcccchHHHHHH
Q 009771 432 LNGKLA-----HTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLD---QRLSPPVNQKIVQDIIL 503 (526)
Q Consensus 432 l~~~~~-----~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d---~~l~~~~~~~~~~~~~~ 503 (526)
..||.. .....+.++||||||++++|++||+.|....... .....+.. +....+ ... -..
T Consensus 184 ~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~~~--~~~---~~~ 251 (302)
T 2j7t_A 184 MAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM-------RVLLKIAKSDPPTLLTP--SKW---SVE 251 (302)
T ss_dssp CCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHH-------HHHHHHHHSCCCCCSSG--GGS---CHH
T ss_pred cCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHH-------HHHHHHhccCCcccCCc--ccc---CHH
Confidence 346654 3456788999999999999999999995432110 00001100 111100 111 123
Q ss_pred HHHHHHhcCCCCCCCCCCccccC
Q 009771 504 VSTIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 504 ~~~la~~C~~~~p~~RP~m~~v~ 526 (526)
+.++...|++.+|++||++.||+
T Consensus 252 l~~li~~~l~~dp~~Rps~~~ll 274 (302)
T 2j7t_A 252 FRDFLKIALDKNPETRPSAAQLL 274 (302)
T ss_dssp HHHHHHHHSCSCTTTSCCHHHHT
T ss_pred HHHHHHHHcccChhhCCCHHHHh
Confidence 55677899999999999998874
No 311
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=97.59 E-value=1.9e-06 Score=83.63 Aligned_cols=77 Identities=18% Similarity=0.279 Sum_probs=50.3
Q ss_pred CCchhcccccc-cccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVV-TEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~-~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||....... +.++||||||++++|++||+.|........ ....... ....+ .+.++...
T Consensus 215 ~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-------------~~~~~~~--~~~~~---~~~~li~~ 276 (320)
T 3a99_A 215 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII-------------RGQVFFR--QRVSS---ECQHLIRW 276 (320)
T ss_dssp SCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHH-------------HCCCCCS--SCCCH---HHHHHHHH
T ss_pred CChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhhh-------------ccccccc--ccCCH---HHHHHHHH
Confidence 35676554444 678999999999999999999954321111 1111000 11112 34567789
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||++.||+
T Consensus 277 ~l~~dp~~Rps~~~ll 292 (320)
T 3a99_A 277 CLALRPSDRPTFEEIQ 292 (320)
T ss_dssp HTCSSGGGSCCHHHHH
T ss_pred HccCChhhCcCHHHHh
Confidence 9999999999998863
No 312
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=97.59 E-value=4.7e-06 Score=84.72 Aligned_cols=85 Identities=14% Similarity=0.134 Sum_probs=53.0
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCC--CcccchHHHHHHHHHHHH
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSP--PVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~--~~~~~~~~~~~~~~~la~ 509 (526)
..||.......+.++||||+||+++|+++|+.|...... ......+....... +......+ .+.++..
T Consensus 180 ~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~-------~~~~~~i~~~~~~~~~~~~~~~s~---~~~~li~ 249 (444)
T 3soa_A 180 LSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ-------HRLYQQIKAGAYDFPSPEWDTVTP---EAKDLIN 249 (444)
T ss_dssp CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH-------HHHHHHHHHTCCCCCTTTTTTSCH---HHHHHHH
T ss_pred CCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH-------HHHHHHHHhCCCCCCccccccCCH---HHHHHHH
Confidence 457777766788999999999999999999999532100 00011111111110 00011112 3446778
Q ss_pred hcCCCCCCCCCCccccC
Q 009771 510 ACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v~ 526 (526)
.|++.+|++||++.|++
T Consensus 250 ~~L~~dP~~Rpta~e~L 266 (444)
T 3soa_A 250 KMLTINPSKRITAAEAL 266 (444)
T ss_dssp HHSCSSTTTSCCHHHHH
T ss_pred HHcCCChhHCCCHHHHh
Confidence 99999999999998863
No 313
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=97.59 E-value=1.5e-05 Score=77.66 Aligned_cols=95 Identities=18% Similarity=0.193 Sum_probs=53.4
Q ss_pred CCchhcccc-cccccccccccceeeeehhcCCCCCccccccc---------cccCCCc--------cccccccCCCCCCc
Q 009771 432 LNGKLAHTM-VVTEKCDVYSFGVVALEILMGRHPGELLSSLS---------SSSGPKI--------MLINVLDQRLSPPV 493 (526)
Q Consensus 432 l~~~~~~~~-~~~~k~dvysfGv~llElltg~~P~~~~~~~~---------~~~~~~~--------~~~~~~d~~l~~~~ 493 (526)
..||..... ..+.++||||+|++++|++||+.|........ ....+.. .......+.+....
T Consensus 191 ~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (331)
T 4aaa_A 191 RAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKERE 270 (331)
T ss_dssp CCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCC
T ss_pred cCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccc
Confidence 457765543 67889999999999999999999853211100 0000000 00001111111000
Q ss_pred c--cchHHHHHHHHHHHHhcCCCCCCCCCCccccC
Q 009771 494 N--QKIVQDIILVSTIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 494 ~--~~~~~~~~~~~~la~~C~~~~p~~RP~m~~v~ 526 (526)
. ......-..+.++...|++.+|++||++.||+
T Consensus 271 ~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell 305 (331)
T 4aaa_A 271 PLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELL 305 (331)
T ss_dssp CHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGG
T ss_pred hhhhcccchhHHHHHHHHHHhccCcccCCCHHHHh
Confidence 0 00001123466788899999999999999985
No 314
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=97.59 E-value=1.2e-05 Score=81.37 Aligned_cols=34 Identities=18% Similarity=0.151 Sum_probs=30.2
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCC
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPG 465 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~ 465 (526)
..||.......+.++|||||||+++|++||+.|.
T Consensus 266 ~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf 299 (429)
T 3kvw_A 266 RAPEVILGARYGMPIDMWSLGCILAELLTGYPLL 299 (429)
T ss_dssp CCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred cChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCC
Confidence 4688877778899999999999999999999884
No 315
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=97.59 E-value=3.5e-06 Score=82.96 Aligned_cols=86 Identities=13% Similarity=0.109 Sum_probs=53.9
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++||||+||+++|++||+.|...... .....+......... ......-..+.++...|
T Consensus 200 ~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--------~~~~~i~~~~~~~~~-~~~~~~s~~~~~li~~~ 270 (351)
T 3c0i_A 200 MAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE--------RLFEGIIKGKYKMNP-RQWSHISESAKDLVRRM 270 (351)
T ss_dssp CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH--------HHHHHHHHTCCCCCH-HHHTTSCHHHHHHHHHH
T ss_pred cCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH--------HHHHHHHcCCCCCCc-cccccCCHHHHHHHHHH
Confidence 457777666788999999999999999999999542110 001111111111000 00000112455778899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|++||++.|++
T Consensus 271 L~~dP~~R~s~~e~l 285 (351)
T 3c0i_A 271 LMLDPAERITVYEAL 285 (351)
T ss_dssp TCSSTTTSCCHHHHH
T ss_pred CCCChhHCcCHHHHh
Confidence 999999999998863
No 316
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=97.58 E-value=4.6e-06 Score=81.54 Aligned_cols=83 Identities=20% Similarity=0.362 Sum_probs=53.5
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++||||||++++|++||+.|...... ......+.......+ ..... .+.++...|
T Consensus 208 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~~~~~~~~~~~~~~--~~~~~---~~~~li~~~ 275 (335)
T 2owb_A 208 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL-------KETYLRIKKNEYSIP--KHINP---VAASLIQKM 275 (335)
T ss_dssp CCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH-------HHHHHHHHHTCCCCC--TTSCH---HHHHHHHHH
T ss_pred cCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCH-------HHHHHHHhcCCCCCC--ccCCH---HHHHHHHHH
Confidence 467877777788899999999999999999999542110 000111111111101 11112 344677899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|++||++.|++
T Consensus 276 l~~dp~~Rps~~ell 290 (335)
T 2owb_A 276 LQTDPTARPTINELL 290 (335)
T ss_dssp TCSSGGGSCCGGGGG
T ss_pred ccCChhHCcCHHHHh
Confidence 999999999999974
No 317
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=97.58 E-value=2e-06 Score=83.15 Aligned_cols=86 Identities=22% Similarity=0.251 Sum_probs=52.9
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++||||||++++|++||+.|...... .......+.....+.. .........+.++...|
T Consensus 186 ~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~-------~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~ 257 (311)
T 3ork_A 186 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP-------VSVAYQHVREDPIPPS-ARHEGLSADLDAVVLKA 257 (311)
T ss_dssp CCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH-------HHHHHHHHHCCCCCHH-HHSTTCCHHHHHHHHHH
T ss_pred CCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh-------HHHHHHHhcCCCCCcc-cccCCCCHHHHHHHHHH
Confidence 457877777788999999999999999999999532110 0001111111111100 00000122355778899
Q ss_pred CCCCCCCCCCcccc
Q 009771 512 LSSQPKSRPTMQRI 525 (526)
Q Consensus 512 ~~~~p~~RP~m~~v 525 (526)
++.+|++||+..++
T Consensus 258 l~~dP~~R~~~~~~ 271 (311)
T 3ork_A 258 LAKNPENRYQTAAE 271 (311)
T ss_dssp TCSSGGGSCSSHHH
T ss_pred HhcCHhhChhhHHH
Confidence 99999999987764
No 318
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=97.58 E-value=3.7e-06 Score=83.96 Aligned_cols=85 Identities=18% Similarity=0.149 Sum_probs=53.5
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCC--CCCCcccchHHHHHHHHHHHH
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQR--LSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~--l~~~~~~~~~~~~~~~~~la~ 509 (526)
..||.......+.++|||||||+++|++||+.|....... .....+.... ......... -..+.++..
T Consensus 217 ~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~-------~~~~~i~~~~~~~~~~~~~~~---s~~~~~li~ 286 (387)
T 1kob_A 217 AAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL-------ETLQNVKRCDWEFDEDAFSSV---SPEAKDFIK 286 (387)
T ss_dssp CCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH-------HHHHHHHHCCCCCCSSTTTTS---CHHHHHHHH
T ss_pred cCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH-------HHHHHHHhCCCCCCccccccC---CHHHHHHHH
Confidence 4577777777889999999999999999999995421100 0011111100 000000111 123557788
Q ss_pred hcCCCCCCCCCCccccC
Q 009771 510 ACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v~ 526 (526)
.|++.+|++||++.|++
T Consensus 287 ~~L~~dP~~Rpt~~ell 303 (387)
T 1kob_A 287 NLLQKEPRKRLTVHDAL 303 (387)
T ss_dssp TTSCSSGGGSCCHHHHH
T ss_pred HHcCCChhHCcCHHHHh
Confidence 99999999999998863
No 319
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=97.58 E-value=5.8e-06 Score=83.55 Aligned_cols=88 Identities=17% Similarity=0.126 Sum_probs=51.8
Q ss_pred CCchhcc---cccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHH
Q 009771 432 LNGKLAH---TMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIA 508 (526)
Q Consensus 432 l~~~~~~---~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la 508 (526)
..||... ....+.++|||||||+++|++||+.|...... .....+.+.............+.-..+.++.
T Consensus 308 ~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~-------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 380 (419)
T 3i6u_A 308 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT-------QVSLKDQITSGKYNFIPEVWAEVSEKALDLV 380 (419)
T ss_dssp CCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSS-------SCCHHHHHHTTCCCCCHHHHTTSCHHHHHHH
T ss_pred cCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcc-------hHHHHHHHhcCCCCCCchhhcccCHHHHHHH
Confidence 4566643 34567899999999999999999999542110 0011111111110000000001123466788
Q ss_pred HhcCCCCCCCCCCccccC
Q 009771 509 FACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 509 ~~C~~~~p~~RP~m~~v~ 526 (526)
..|++.+|++||++.|++
T Consensus 381 ~~~L~~dP~~Rps~~e~l 398 (419)
T 3i6u_A 381 KKLLVVDPKARFTTEEAL 398 (419)
T ss_dssp HHHSCSSTTTSCCHHHHH
T ss_pred HHHccCChhHCcCHHHHh
Confidence 899999999999998863
No 320
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=97.56 E-value=3.2e-06 Score=80.95 Aligned_cols=86 Identities=19% Similarity=0.244 Sum_probs=51.6
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++||||+|++++|++||+.|....... . .....+.............+....+.++...|
T Consensus 179 ~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 251 (294)
T 4eqm_A 179 FSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAV------S-IAIKHIQDSVPNVTTDVRKDIPQSLSNVILRA 251 (294)
T ss_dssp CCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHH------H-HHHHHHSSCCCCHHHHSCTTSCHHHHHHHHHH
T ss_pred cCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH------H-HHHHHhhccCCCcchhcccCCCHHHHHHHHHH
Confidence 5688777777889999999999999999999995421110 0 00011111111000000001123455678899
Q ss_pred CCCCCCCCC-Cccc
Q 009771 512 LSSQPKSRP-TMQR 524 (526)
Q Consensus 512 ~~~~p~~RP-~m~~ 524 (526)
++.+|.+|| ++.+
T Consensus 252 l~~dp~~R~~~~~~ 265 (294)
T 4eqm_A 252 TEKDKANRYKTIQE 265 (294)
T ss_dssp SCSSGGGSCSSHHH
T ss_pred hcCCHhHccccHHH
Confidence 999999999 6554
No 321
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=97.56 E-value=1.5e-05 Score=77.33 Aligned_cols=35 Identities=11% Similarity=0.109 Sum_probs=30.4
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.......+.++||||||++++|++||+.|..
T Consensus 186 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 220 (326)
T 1blx_A 186 RAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFR 220 (326)
T ss_dssp CCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred eCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCC
Confidence 46787777778899999999999999999999954
No 322
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=97.55 E-value=1.6e-06 Score=82.68 Aligned_cols=81 Identities=17% Similarity=0.283 Sum_probs=50.1
Q ss_pred CCchhccc-ccccccccccccceeeeehhcCCCCCccccccccccCCCcccccccc--CCCCCCcccchHHHHHHHHHHH
Q 009771 432 LNGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLD--QRLSPPVNQKIVQDIILVSTIA 508 (526)
Q Consensus 432 l~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d--~~l~~~~~~~~~~~~~~~~~la 508 (526)
..||.... ...+.++||||||++++|++||+.|...... ......... ..+.... ...+.++.
T Consensus 184 ~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~~-------~~~l~~li 249 (289)
T 4fvq_A 184 VPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALD-------SQRKLQFYEDRHQLPAPK-------AAELANLI 249 (289)
T ss_dssp SCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSC-------HHHHHHHHHTTCCCCCCS-------SCTTHHHH
T ss_pred cCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccc-------hHHHHHHhhccCCCCCCC-------CHHHHHHH
Confidence 45776655 5678899999999999999997665221100 000011111 1111111 11245677
Q ss_pred HhcCCCCCCCCCCccccC
Q 009771 509 FACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 509 ~~C~~~~p~~RP~m~~v~ 526 (526)
..|++.+|++||++.||+
T Consensus 250 ~~~l~~dp~~Rps~~~ll 267 (289)
T 4fvq_A 250 NNCMDYEPDHRPSFRAII 267 (289)
T ss_dssp HHHSCSSGGGSCCHHHHH
T ss_pred HHHcCCChhHCcCHHHHH
Confidence 899999999999998863
No 323
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=97.55 E-value=1.5e-05 Score=76.81 Aligned_cols=35 Identities=23% Similarity=0.184 Sum_probs=28.2
Q ss_pred CCchhccc-ccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.... ...+.++||||||++++|++||+.|..
T Consensus 169 ~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 204 (311)
T 4agu_A 169 RSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWP 204 (311)
T ss_dssp CCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred cChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCC
Confidence 45665543 456889999999999999999999953
No 324
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=97.54 E-value=1.4e-05 Score=80.97 Aligned_cols=86 Identities=14% Similarity=0.167 Sum_probs=50.1
Q ss_pred CCchhcc---cccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHH
Q 009771 432 LNGKLAH---TMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTI 507 (526)
Q Consensus 432 l~~~~~~---~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l 507 (526)
..||... ....+.++|||||||+++|++| |+.|....... .........-.... ......-..+.++
T Consensus 193 ~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~--------~~~~~~~~~~~~~~-~~~~~~~~~~~~l 263 (432)
T 3p23_A 193 IAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR--------QANILLGACSLDCL-HPEKHEDVIAREL 263 (432)
T ss_dssp CCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH--------HHHHHTTCCCCTTS-CTTCHHHHHHHHH
T ss_pred cChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH--------HHHHHhccCCcccc-CccccccHHHHHH
Confidence 3566554 3456778999999999999999 88885321000 00000000000000 0011122335578
Q ss_pred HHhcCCCCCCCCCCccccC
Q 009771 508 AFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 508 a~~C~~~~p~~RP~m~~v~ 526 (526)
...|++.+|.+||++.||+
T Consensus 264 i~~~L~~dP~~Rps~~evl 282 (432)
T 3p23_A 264 IEKMIAMDPQKRPSAKHVL 282 (432)
T ss_dssp HHHHSCSSGGGSCCHHHHH
T ss_pred HHHHHhCCHhhCCCHHHHH
Confidence 8899999999999999873
No 325
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=97.54 E-value=1.7e-05 Score=76.87 Aligned_cols=35 Identities=14% Similarity=0.205 Sum_probs=28.4
Q ss_pred CCchhccc-ccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.... ...+.++|||||||+++|++||+.|..
T Consensus 175 ~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 210 (317)
T 2pmi_A 175 RAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFP 210 (317)
T ss_dssp CCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred cCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 45776543 356889999999999999999999843
No 326
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=97.54 E-value=1.4e-05 Score=78.70 Aligned_cols=95 Identities=16% Similarity=0.125 Sum_probs=53.2
Q ss_pred CCchhccc-ccccccccccccceeeeehhcCCCCCccccc------ccccc-CCCccccccccCCCCC-----Cc-----
Q 009771 432 LNGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPGELLSS------LSSSS-GPKIMLINVLDQRLSP-----PV----- 493 (526)
Q Consensus 432 l~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~~~~~~------~~~~~-~~~~~~~~~~d~~l~~-----~~----- 493 (526)
..||.... ...+.++|||||||+++|++||+.|...... ..+.. .+.......+++.... ..
T Consensus 198 ~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (360)
T 3e3p_A 198 RAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWS 277 (360)
T ss_dssp CCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHH
T ss_pred eCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcc
Confidence 45676533 3478899999999999999999999542110 00000 0000000000000000 00
Q ss_pred ---ccchHHHHHHHHHHHHhcCCCCCCCCCCccccC
Q 009771 494 ---NQKIVQDIILVSTIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 494 ---~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~v~ 526 (526)
..........+.++...|++.+|.+||++.||+
T Consensus 278 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l 313 (360)
T 3e3p_A 278 NVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEAL 313 (360)
T ss_dssp HHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred cccchhhccccHHHHHHHHHHhccCccccCCHHHHh
Confidence 000001234567889999999999999999875
No 327
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=97.54 E-value=2.1e-06 Score=81.57 Aligned_cols=79 Identities=19% Similarity=0.236 Sum_probs=52.7
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++||||||++++|++||+.|......+ ..++.+..+.. .. .. .+.++...|
T Consensus 188 ~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~---------~~~~~~~~~~~---~~-~~---~~~~li~~~ 251 (284)
T 2a19_B 188 MSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKF---------FTDLRDGIISD---IF-DK---KEKTLLQKL 251 (284)
T ss_dssp SCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHH---------HHHHHTTCCCT---TS-CH---HHHHHHHHH
T ss_pred cChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHHH---------HHHhhcccccc---cC-CH---HHHHHHHHH
Confidence 4578777777889999999999999999999884321111 11111111111 11 12 234667899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|++||++.||+
T Consensus 252 l~~dp~~Rps~~e~l 266 (284)
T 2a19_B 252 LSKKPEDRPNTSEIL 266 (284)
T ss_dssp TCSSGGGSCCHHHHH
T ss_pred ccCChhhCcCHHHHH
Confidence 999999999999863
No 328
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=97.53 E-value=4.3e-06 Score=80.67 Aligned_cols=85 Identities=15% Similarity=0.160 Sum_probs=48.5
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++||||||++++|++||+.|....... .....+........ .........+.++...|
T Consensus 202 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~ 272 (309)
T 2h34_A 202 MAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--------VMGAHINQAIPRPS-TVRPGIPVAFDAVIARG 272 (309)
T ss_dssp CCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--------HHHHHHHSCCCCGG-GTSTTCCTHHHHHHHHH
T ss_pred cCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--------HHHHHhccCCCCcc-ccCCCCCHHHHHHHHHh
Confidence 4577666667788999999999999999999995421100 01111111111000 00000112345678899
Q ss_pred CCCCCCCCC-Ccccc
Q 009771 512 LSSQPKSRP-TMQRI 525 (526)
Q Consensus 512 ~~~~p~~RP-~m~~v 525 (526)
++.+|++|| ++.++
T Consensus 273 l~~dP~~Rp~s~~~l 287 (309)
T 2h34_A 273 MAKNPEDRYVTCGDL 287 (309)
T ss_dssp TCSSGGGSCSSHHHH
T ss_pred ccCCHHHHHHhHHHH
Confidence 999999999 78765
No 329
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=97.53 E-value=4.3e-06 Score=81.50 Aligned_cols=83 Identities=20% Similarity=0.225 Sum_probs=51.2
Q ss_pred CCchhcccccc-cccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVV-TEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~-~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||....... +.++||||+||+++|++||+.|..... .......+.......+. . .. ..+..+-..
T Consensus 180 ~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-------~~~~~~~i~~~~~~~p~-~-~s---~~~~~li~~ 247 (328)
T 3fe3_A 180 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN-------LKELRERVLRGKYRIPF-Y-MS---TDCENLLKR 247 (328)
T ss_dssp CCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS-------HHHHHHHHHHCCCCCCT-T-SC---HHHHHHHHH
T ss_pred eCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC-------HHHHHHHHHhCCCCCCC-C-CC---HHHHHHHHH
Confidence 45776655554 478999999999999999999954210 00001111111111111 1 11 224466778
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|.+||++.|++
T Consensus 248 ~L~~dP~~R~t~~eil 263 (328)
T 3fe3_A 248 FLVLNPIKRGTLEQIM 263 (328)
T ss_dssp HCCSSTTTSCCHHHHT
T ss_pred HCCCChhHCcCHHHHh
Confidence 9999999999999874
No 330
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=97.51 E-value=2.9e-06 Score=83.32 Aligned_cols=83 Identities=16% Similarity=0.209 Sum_probs=50.4
Q ss_pred CCchhccccc-ccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMV-VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~-~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||...... .+.++||||+||++.|++||+.|...... ......+.......+. .. .. .+.++...
T Consensus 176 ~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~-------~~~~~~i~~~~~~~p~-~~-s~---~~~~li~~ 243 (347)
T 3zgw_A 176 AAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNV-------MALYKKIMRGKYDVPK-WL-SP---SSILLLQQ 243 (347)
T ss_dssp CCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHTCCCCCT-TC-CH---HHHHHHHH
T ss_pred cCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCH-------HHHHHHHHcCCCCCCC-CC-CH---HHHHHHHH
Confidence 3467665444 37889999999999999999999542110 0001112221111111 11 12 23457788
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||++.||+
T Consensus 244 ~L~~dP~~Rps~~eil 259 (347)
T 3zgw_A 244 MLQVDPKKRISMKNLL 259 (347)
T ss_dssp HTCSSGGGSCCHHHHH
T ss_pred HcccCHhHCcCHHHHh
Confidence 9999999999998863
No 331
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=97.51 E-value=4.7e-06 Score=82.58 Aligned_cols=78 Identities=17% Similarity=0.225 Sum_probs=47.2
Q ss_pred cccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhcCCCCCCCCC
Q 009771 441 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 520 (526)
Q Consensus 441 ~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 520 (526)
..+.++|||||||+++|++||+.|....... .....+......... ......-..+.++...|++.+|++||
T Consensus 281 ~~~~~~Di~slG~il~ell~g~~pf~~~~~~-------~~~~~i~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rp 352 (365)
T 2y7j_A 281 GYGKEVDLWACGVILFTLLAGSPPFWHRRQI-------LMLRMIMEGQYQFSS-PEWDDRSSTVKDLISRLLQVDPEARL 352 (365)
T ss_dssp CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHTCCCCCH-HHHSSSCHHHHHHHHHHSCSSTTTSC
T ss_pred CCCchhhHHhHHHHHHHHHHCCCCCCCCCHH-------HHHHHHHhCCCCCCC-cccccCCHHHHHHHHHHcCCChhHCc
Confidence 4678999999999999999999995321100 001111111111000 00000122356778899999999999
Q ss_pred CccccC
Q 009771 521 TMQRIS 526 (526)
Q Consensus 521 ~m~~v~ 526 (526)
++.||+
T Consensus 353 s~~ell 358 (365)
T 2y7j_A 353 TAEQAL 358 (365)
T ss_dssp CHHHHH
T ss_pred CHHHHh
Confidence 998863
No 332
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=97.51 E-value=4.9e-06 Score=81.58 Aligned_cols=88 Identities=17% Similarity=0.230 Sum_probs=53.3
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCc--ccchHHHHHHHHHHHH
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPV--NQKIVQDIILVSTIAF 509 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~--~~~~~~~~~~~~~la~ 509 (526)
..||.......+.++||||+||+++|+++|+.|....... ........+......... .....+ .+.++-.
T Consensus 187 ~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~----~~~~~~~~i~~~~~~~~~~~~~~~s~---~~~~li~ 259 (342)
T 2qr7_A 187 VAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD----TPEEILARIGSGKFSLSGGYWNSVSD---TAKDLVS 259 (342)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS----CHHHHHHHHHHCCCCCCSTTTTTSCH---HHHHHHH
T ss_pred cCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcC----CHHHHHHHHccCCcccCccccccCCH---HHHHHHH
Confidence 5678776666788999999999999999999995421100 000001111111111000 011112 3446677
Q ss_pred hcCCCCCCCCCCccccC
Q 009771 510 ACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v~ 526 (526)
.|+..+|++||++.||+
T Consensus 260 ~~L~~dP~~R~t~~~il 276 (342)
T 2qr7_A 260 KMLHVDPHQRLTAALVL 276 (342)
T ss_dssp HHTCSSTTTSCCHHHHT
T ss_pred HHCCCChhHCcCHHHHh
Confidence 89999999999998874
No 333
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=97.51 E-value=7.6e-06 Score=77.90 Aligned_cols=85 Identities=20% Similarity=0.227 Sum_probs=50.2
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||... ...+.++||||||++++|++||+.|....... .... ......+...... ... ...+.++...|
T Consensus 193 ~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~---~~~~--~~~~~~~~~~~~~-~~~---~~~~~~li~~~ 262 (285)
T 3is5_A 193 MAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE---EVQQ--KATYKEPNYAVEC-RPL---TPQAVDLLKQM 262 (285)
T ss_dssp CCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH--HHHHCCCCCCC---CCC---CHHHHHHHHHH
T ss_pred CChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHH---HHHh--hhccCCccccccc-CcC---CHHHHHHHHHH
Confidence 3466554 35678999999999999999999995421100 0000 0000011111000 001 12345677899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|++||++.||+
T Consensus 263 L~~dP~~Rps~~e~l 277 (285)
T 3is5_A 263 LTKDPERRPSAAQVL 277 (285)
T ss_dssp TCSCTTTSCCHHHHH
T ss_pred ccCChhhCcCHHHHh
Confidence 999999999999874
No 334
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=97.51 E-value=4.6e-06 Score=80.15 Aligned_cols=83 Identities=20% Similarity=0.190 Sum_probs=50.3
Q ss_pred CCchhcccc--cccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHH
Q 009771 432 LNGKLAHTM--VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 432 l~~~~~~~~--~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
..||..... ..+.++||||||++++|++||+.|....... .....+.......+ ... -..+.++..
T Consensus 178 ~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~i~~~~~~~~--~~~---~~~l~~li~ 245 (305)
T 2wtk_C 178 QPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIY-------KLFENIGKGSYAIP--GDC---GPPLSDLLK 245 (305)
T ss_dssp CCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHH-------HHHHHHHHCCCCCC--SSS---CHHHHHHHH
T ss_pred cChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHH-------HHHHHHhcCCCCCC--Ccc---CHHHHHHHH
Confidence 346655432 2367899999999999999999995421100 00111111111111 111 123456778
Q ss_pred hcCCCCCCCCCCccccC
Q 009771 510 ACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v~ 526 (526)
.|++.+|++||++.|++
T Consensus 246 ~~l~~dp~~Rps~~~ll 262 (305)
T 2wtk_C 246 GMLEYEPAKRFSIRQIR 262 (305)
T ss_dssp HHTCSSTTTSCCHHHHH
T ss_pred HHccCChhhCCCHHHHh
Confidence 99999999999998863
No 335
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=97.51 E-value=6.8e-06 Score=78.67 Aligned_cols=79 Identities=19% Similarity=0.162 Sum_probs=48.2
Q ss_pred ccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhcCCCCCCCC
Q 009771 440 MVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSR 519 (526)
Q Consensus 440 ~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 519 (526)
...+.++||||||++++|+++|+.|....... .....+......... .........+.++...|++.+|++|
T Consensus 204 ~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~dp~~R 275 (298)
T 1phk_A 204 PGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM-------LMLRMIMSGNYQFGS-PEWDDYSDTVKDLVSRFLVVQPQKR 275 (298)
T ss_dssp CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHTCCCCCT-TTGGGSCHHHHHHHHHHCCSSGGGS
T ss_pred ccCCcccccHhHHHHHHHHHHCCCCCcCccHH-------HHHHHHhcCCcccCc-ccccccCHHHHHHHHHHccCCcccC
Confidence 35678999999999999999999995321100 001111111111000 0001112345677889999999999
Q ss_pred CCccccC
Q 009771 520 PTMQRIS 526 (526)
Q Consensus 520 P~m~~v~ 526 (526)
|++.|++
T Consensus 276 ps~~~ll 282 (298)
T 1phk_A 276 YTAEEAL 282 (298)
T ss_dssp CCHHHHT
T ss_pred CCHHHHH
Confidence 9998874
No 336
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=97.50 E-value=5.4e-06 Score=80.00 Aligned_cols=77 Identities=21% Similarity=0.358 Sum_probs=50.2
Q ss_pred CCchhcccccc-cccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVV-TEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~-~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||....... +.++||||||++++|++||+.|...... +.+.....+ .... ..+.++...
T Consensus 205 ~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------------~~~~~~~~~--~~~~---~~~~~li~~ 266 (312)
T 2iwi_A 205 SPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE-------------ILEAELHFP--AHVS---PDCCALIRR 266 (312)
T ss_dssp SCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-------------HHHTCCCCC--TTSC---HHHHHHHHH
T ss_pred cCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH-------------HhhhccCCc--ccCC---HHHHHHHHH
Confidence 45776554444 4589999999999999999999543211 111111111 1111 234567789
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||++.||+
T Consensus 267 ~l~~~p~~Rps~~e~l 282 (312)
T 2iwi_A 267 CLAPKPSSRPSLEEIL 282 (312)
T ss_dssp HTCSSTTTSCCHHHHH
T ss_pred HccCChhhCcCHHHHh
Confidence 9999999999999873
No 337
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=97.49 E-value=4.6e-05 Score=80.65 Aligned_cols=94 Identities=20% Similarity=0.127 Sum_probs=52.7
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCcc---ccccccccCCC----cccccccc------CCCCCCcccchH
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGEL---LSSLSSSSGPK----IMLINVLD------QRLSPPVNQKIV 498 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~---~~~~~~~~~~~----~~~~~~~d------~~l~~~~~~~~~ 498 (526)
..||.......+.++||||||++++|++||+.|... ...|....... ....+... ..+..+. ....
T Consensus 190 ~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~-~l~~ 268 (676)
T 3qa8_A 190 LAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPN-HLSG 268 (676)
T ss_dssp CSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSC-CCCG
T ss_pred CChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhccccccccccCCch-hhch
Confidence 457776667788999999999999999999999532 11221111000 00111111 1111110 1111
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCccccC
Q 009771 499 QDIILVSTIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 499 ~~~~~~~~la~~C~~~~p~~RP~m~~v~ 526 (526)
.....+.++...|++.+|++||++.|++
T Consensus 269 ~ls~~L~dLI~~mL~~DP~kRPTa~elL 296 (676)
T 3qa8_A 269 ILAGKLERWLQCMLMWHQRQRGTDPQNP 296 (676)
T ss_dssp GGHHHHHHHHHHHSCSSCC---CCTTCC
T ss_pred hhhHHHHHHHHHHccCCHhhCcCHHHHh
Confidence 2234566788899999999999998863
No 338
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=97.49 E-value=6.4e-06 Score=79.63 Aligned_cols=94 Identities=13% Similarity=0.227 Sum_probs=53.0
Q ss_pred CCchhccc-----ccccccccccccceeeeehhcCCCCCcccc----ccccccCC----CccccccccCCCCCCcccchH
Q 009771 432 LNGKLAHT-----MVVTEKCDVYSFGVVALEILMGRHPGELLS----SLSSSSGP----KIMLINVLDQRLSPPVNQKIV 498 (526)
Q Consensus 432 l~~~~~~~-----~~~~~k~dvysfGv~llElltg~~P~~~~~----~~~~~~~~----~~~~~~~~d~~l~~~~~~~~~ 498 (526)
..||.... ...+.++|||||||+++|++||+.|..... .|...... ......+.......+. ....
T Consensus 188 ~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~ 266 (316)
T 2ac3_A 188 MAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPD-KDWA 266 (316)
T ss_dssp CCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCCH-HHHT
T ss_pred cChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCcccCc-hhcc
Confidence 35666543 457889999999999999999999954211 11100000 0001111111111110 0000
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCccccC
Q 009771 499 QDIILVSTIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 499 ~~~~~~~~la~~C~~~~p~~RP~m~~v~ 526 (526)
..-..+.++...|++.+|++||++.||+
T Consensus 267 ~~~~~~~~li~~~L~~dP~~Rps~~e~l 294 (316)
T 2ac3_A 267 HISCAAKDLISKLLVRDAKQRLSAAQVL 294 (316)
T ss_dssp TSCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred cCCHHHHHHHHHHhhCChhhCCCHHHHh
Confidence 0123466788899999999999998873
No 339
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=97.49 E-value=6.2e-06 Score=81.47 Aligned_cols=86 Identities=17% Similarity=0.157 Sum_probs=52.7
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|+||+||+++|+++|+.|...... ......+.......+. ......-..+.++-..|
T Consensus 185 ~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~-------~~~~~~i~~~~~~~~~-~~~~~~s~~~~~li~~~ 256 (361)
T 2yab_A 185 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK-------QETLANITAVSYDFDE-EFFSQTSELAKDFIRKL 256 (361)
T ss_dssp CCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH-------HHHHHHHHTTCCCCCH-HHHTTSCHHHHHHHHHH
T ss_pred ECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhcCCCCCc-hhccCCCHHHHHHHHHH
Confidence 457777666788999999999999999999999532100 0001111111111000 00000012345677899
Q ss_pred CCCCCCCCCCcccc
Q 009771 512 LSSQPKSRPTMQRI 525 (526)
Q Consensus 512 ~~~~p~~RP~m~~v 525 (526)
+..+|++||++.|+
T Consensus 257 L~~dP~~R~t~~e~ 270 (361)
T 2yab_A 257 LVKETRKRLTIQEA 270 (361)
T ss_dssp SCSSTTTSCCHHHH
T ss_pred CCCChhHCcCHHHH
Confidence 99999999999886
No 340
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=97.48 E-value=1.9e-05 Score=78.85 Aligned_cols=35 Identities=29% Similarity=0.425 Sum_probs=29.1
Q ss_pred CCchhccc--ccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHT--MVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~--~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.... ...+.++|||||||+++|++||+.|..
T Consensus 202 ~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 238 (389)
T 3gni_B 202 LSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFK 238 (389)
T ss_dssp SCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred cCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCC
Confidence 45776654 467889999999999999999999954
No 341
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=97.48 E-value=4.9e-06 Score=79.77 Aligned_cols=81 Identities=21% Similarity=0.288 Sum_probs=50.3
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|||||||++.||++ |...-... ...+..+.+.... ....+.......+-..|
T Consensus 197 mAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~------~~~~~~~~~~~~p----~~~~~~~~~~~~li~~~ 263 (299)
T 4g31_A 197 MSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMER------VRTLTDVRNLKFP----PLFTQKYPCEYVMVQDM 263 (299)
T ss_dssp SCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHH------HHHHHHHHTTCCC----HHHHHHCHHHHHHHHHH
T ss_pred cCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHH------HHHHHHHhcCCCC----CCCcccCHHHHHHHHHH
Confidence 56888877788999999999999999997 53210000 0001111111111 11112223344677899
Q ss_pred CCCCCCCCCCcccc
Q 009771 512 LSSQPKSRPTMQRI 525 (526)
Q Consensus 512 ~~~~p~~RP~m~~v 525 (526)
++.+|++||++.|+
T Consensus 264 L~~dP~~Rps~~ei 277 (299)
T 4g31_A 264 LSPSPMERPEAINI 277 (299)
T ss_dssp TCSSGGGSCCHHHH
T ss_pred cCCChhHCcCHHHH
Confidence 99999999999886
No 342
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=97.47 E-value=6.4e-06 Score=79.68 Aligned_cols=76 Identities=17% Similarity=0.229 Sum_probs=46.5
Q ss_pred cccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhcCCCCCCCCC
Q 009771 441 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 520 (526)
Q Consensus 441 ~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 520 (526)
..+.++||||||++++|++||+.|........ .. ..+.....+..... .. -..+.++...|++.+|++||
T Consensus 219 ~~~~~~Di~slG~il~el~~g~~p~~~~~~~~---~~-~~~~~~~~~~~~~~---~~---~~~l~~li~~~l~~~p~~Rp 288 (319)
T 2y4i_B 219 PFSKHSDVFALGTIWYELHAREWPFKTQPAEA---II-WQMGTGMKPNLSQI---GM---GKEISDILLFCWAFEQEERP 288 (319)
T ss_dssp CCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHH---HH-HHHHTTCCCCCCCS---SC---CTTHHHHHHHHHCSSTTTSC
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HH-HHhccCCCCCCCcC---CC---CHHHHHHHHHHhcCChhhCc
Confidence 46789999999999999999999954211000 00 00001111111110 01 11245778899999999999
Q ss_pred CccccC
Q 009771 521 TMQRIS 526 (526)
Q Consensus 521 ~m~~v~ 526 (526)
++.||+
T Consensus 289 t~~~l~ 294 (319)
T 2y4i_B 289 TFTKLM 294 (319)
T ss_dssp CHHHHH
T ss_pred CHHHHH
Confidence 998863
No 343
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=97.47 E-value=3.9e-06 Score=79.38 Aligned_cols=83 Identities=18% Similarity=0.259 Sum_probs=50.6
Q ss_pred CCchhccccc-ccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMV-VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~-~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||...... .+.++||||||++++|++||+.|...... ......+.......+ ... -..+.++...
T Consensus 177 ~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-------~~~~~~~~~~~~~~~--~~~---~~~l~~li~~ 244 (276)
T 2h6d_A 177 AAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV-------PTLFKKIRGGVFYIP--EYL---NRSVATLLMH 244 (276)
T ss_dssp CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHCCCCCC--TTS---CHHHHHHHHH
T ss_pred cCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH-------HHHHHHhhcCcccCc--hhc---CHHHHHHHHH
Confidence 4566655443 36789999999999999999999542100 000111111111000 111 1235577889
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||++.||+
T Consensus 245 ~l~~~p~~Rps~~~~l 260 (276)
T 2h6d_A 245 MLQVDPLKRATIKDIR 260 (276)
T ss_dssp HTCSSGGGSCCHHHHH
T ss_pred HccCChhhCCCHHHHH
Confidence 9999999999999863
No 344
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=97.47 E-value=4.1e-06 Score=82.72 Aligned_cols=35 Identities=20% Similarity=0.376 Sum_probs=30.4
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.......+.++||||||++++|++||+.|..
T Consensus 197 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 231 (360)
T 3eqc_A 197 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIP 231 (360)
T ss_dssp CCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSS
T ss_pred ECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 45777777778899999999999999999999953
No 345
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=97.47 E-value=2.8e-05 Score=79.57 Aligned_cols=35 Identities=17% Similarity=0.151 Sum_probs=30.5
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.......+.++||||+||++.|+++|+.|..
T Consensus 230 ~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~ 264 (464)
T 3ttj_A 230 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 264 (464)
T ss_dssp CCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred cCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCC
Confidence 46787777788899999999999999999999843
No 346
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=97.46 E-value=6.4e-06 Score=78.49 Aligned_cols=86 Identities=20% Similarity=0.160 Sum_probs=51.0
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.... ..+.++||||||++++|++||+.|....... .....+......... ......-..+.++...|
T Consensus 190 ~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~ 260 (287)
T 2wei_A 190 IAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY-------DILKRVETGKYAFDL-PQWRTISDDAKDLIRKM 260 (287)
T ss_dssp CCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHCCCCCCS-GGGTTSCHHHHHHHHHH
T ss_pred cChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHcCCCCCCc-hhhhhcCHHHHHHHHHH
Confidence 34665543 4788999999999999999999995421110 001111111110000 00001112355778899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|++||++.|++
T Consensus 261 l~~dp~~Rps~~ell 275 (287)
T 2wei_A 261 LTFHPSLRITATQCL 275 (287)
T ss_dssp TCSSGGGSCCHHHHH
T ss_pred cccChhhCcCHHHHh
Confidence 999999999998863
No 347
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=97.46 E-value=2.4e-05 Score=74.47 Aligned_cols=95 Identities=14% Similarity=0.045 Sum_probs=52.6
Q ss_pred CCchhccc-ccccccccccccceeeeehhcCCCCCcccccc------c-------cccCCCccccccccCCCCCCc----
Q 009771 432 LNGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPGELLSSL------S-------SSSGPKIMLINVLDQRLSPPV---- 493 (526)
Q Consensus 432 l~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~~~~~~~------~-------~~~~~~~~~~~~~d~~l~~~~---- 493 (526)
..||.... ...+.++||||+||+++|++||+.|....... . ....+........++......
T Consensus 167 ~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (288)
T 1ob3_A 167 RAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPW 246 (288)
T ss_dssp CCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCG
T ss_pred cCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccccccccCccH
Confidence 45776643 34788999999999999999999985321100 0 000010000001111111000
Q ss_pred ccchHHHHHHHHHHHHhcCCCCCCCCCCccccC
Q 009771 494 NQKIVQDIILVSTIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 494 ~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~v~ 526 (526)
.......-..+.++-..|++.+|++||++.|++
T Consensus 247 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l 279 (288)
T 1ob3_A 247 ESFLKGLDESGIDLLSKMLKLDPNQRITAKQAL 279 (288)
T ss_dssp GGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred HHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 000000112345778899999999999998863
No 348
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=97.46 E-value=5.6e-06 Score=80.50 Aligned_cols=82 Identities=18% Similarity=0.273 Sum_probs=53.6
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|||||||+++|++||..|....... ...+...... .........+.++...|
T Consensus 243 ~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~~---------~~~~~~~~~~----~~~~~~~~~~~~li~~~ 309 (332)
T 3qd2_B 243 MSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRI---------ITDVRNLKFP----LLFTQKYPQEHMMVQDM 309 (332)
T ss_dssp SCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHH---------HHHHHTTCCC----HHHHHHCHHHHHHHHHH
T ss_pred cChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHHH---------HHHhhccCCC----cccccCChhHHHHHHHH
Confidence 4577777677889999999999999999998873221110 1111111110 11122233456778899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|++||++.||+
T Consensus 310 l~~~p~~Rps~~~~l 324 (332)
T 3qd2_B 310 LSPSPTERPEATDII 324 (332)
T ss_dssp HCSSGGGSCCHHHHH
T ss_pred ccCCCCcCCCHHHHh
Confidence 999999999999873
No 349
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=97.45 E-value=2.8e-05 Score=74.31 Aligned_cols=35 Identities=14% Similarity=0.170 Sum_probs=28.5
Q ss_pred CCchhccccc-ccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHTMV-VTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~~~-~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||...... .+.++||||||++++|++||+.|..
T Consensus 170 ~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~ 205 (299)
T 2r3i_A 170 RAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFP 205 (299)
T ss_dssp CCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred cCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCC
Confidence 4577665443 6889999999999999999999943
No 350
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=97.45 E-value=1e-05 Score=78.20 Aligned_cols=35 Identities=14% Similarity=0.208 Sum_probs=28.4
Q ss_pred CCchhccc-ccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.... ...+.++||||+||+++|++||+.|..
T Consensus 186 ~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~ 221 (311)
T 3niz_A 186 RAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFP 221 (311)
T ss_dssp CCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred CCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCC
Confidence 45776543 456889999999999999999999853
No 351
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=97.44 E-value=1.1e-05 Score=78.33 Aligned_cols=85 Identities=18% Similarity=0.310 Sum_probs=49.3
Q ss_pred CCchhcc-----cccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHH
Q 009771 432 LNGKLAH-----TMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVST 506 (526)
Q Consensus 432 l~~~~~~-----~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~ 506 (526)
..||... ....+.++||||||++++|++||+.|.......... ..+.....+.... ....+ .+.+
T Consensus 196 ~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~----~~~~~~~~~~~~~---~~~~~---~l~~ 265 (326)
T 2x7f_A 196 MAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRAL----FLIPRNPAPRLKS---KKWSK---KFQS 265 (326)
T ss_dssp CCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHH----HHHHHSCCCCCSC---SCSCH---HHHH
T ss_pred cChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHH----HHhhcCccccCCc---cccCH---HHHH
Confidence 3456543 446788999999999999999999995421111000 0000000111111 11112 3446
Q ss_pred HHHhcCCCCCCCCCCccccC
Q 009771 507 IAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 507 la~~C~~~~p~~RP~m~~v~ 526 (526)
+...|++.+|.+||++.||+
T Consensus 266 li~~~l~~dp~~Rps~~~ll 285 (326)
T 2x7f_A 266 FIESCLVKNHSQRPATEQLM 285 (326)
T ss_dssp HHHHHCCSSGGGSCCHHHHH
T ss_pred HHHHHhccChhhCCCHHHHh
Confidence 67799999999999998863
No 352
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=97.43 E-value=2.5e-05 Score=75.98 Aligned_cols=35 Identities=14% Similarity=0.097 Sum_probs=28.7
Q ss_pred CCchhcccc-cccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHTM-VVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~~-~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||..... ..+.++|||||||+++|++||+.|..
T Consensus 204 ~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~ 239 (329)
T 3gbz_A 204 RPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFP 239 (329)
T ss_dssp CCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred cCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcC
Confidence 457766543 46899999999999999999999843
No 353
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=97.43 E-value=1.5e-05 Score=76.03 Aligned_cols=33 Identities=15% Similarity=0.197 Sum_probs=27.4
Q ss_pred CCchhccccc-ccccccccccceeeeehhcCCCC
Q 009771 432 LNGKLAHTMV-VTEKCDVYSFGVVALEILMGRHP 464 (526)
Q Consensus 432 l~~~~~~~~~-~~~k~dvysfGv~llElltg~~P 464 (526)
..||...... .+.++|||||||+++|++||+.|
T Consensus 168 ~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p 201 (292)
T 3o0g_A 168 RPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRP 201 (292)
T ss_dssp CCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCC
T ss_pred cChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCC
Confidence 4567665444 68899999999999999999998
No 354
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=97.42 E-value=6.8e-06 Score=78.04 Aligned_cols=81 Identities=11% Similarity=0.132 Sum_probs=50.0
Q ss_pred CCchhcccc-cccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTM-VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~-~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||..... ..+.++||||||++++|+++|+.|......+ ..+......... .... ..+.++...
T Consensus 197 ~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~----------~~~~~~~~~~~~-~~~~---~~~~~li~~ 262 (289)
T 1x8b_A 197 LANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQW----------HEIRQGRLPRIP-QVLS---QEFTELLKV 262 (289)
T ss_dssp CCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHH----------HHHHTTCCCCCS-SCCC---HHHHHHHHH
T ss_pred cChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHH----------HHHHcCCCCCCC-cccC---HHHHHHHHH
Confidence 346665433 4567999999999999999999763221111 111111111100 1111 234567789
Q ss_pred cCCCCCCCCCCccccC
Q 009771 511 CLSSQPKSRPTMQRIS 526 (526)
Q Consensus 511 C~~~~p~~RP~m~~v~ 526 (526)
|++.+|++||++.|++
T Consensus 263 ~l~~dp~~Rps~~~ll 278 (289)
T 1x8b_A 263 MIHPDPERRPSAMALV 278 (289)
T ss_dssp HTCSSGGGSCCHHHHH
T ss_pred HhCCCcccCCCHHHHh
Confidence 9999999999999873
No 355
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=97.42 E-value=3.2e-05 Score=75.93 Aligned_cols=95 Identities=11% Similarity=0.051 Sum_probs=52.8
Q ss_pred CCchhccc-ccccccccccccceeeeehhcCCCCCccccc-------------cccccCCCccccccccCC-CCCCcccc
Q 009771 432 LNGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPGELLSS-------------LSSSSGPKIMLINVLDQR-LSPPVNQK 496 (526)
Q Consensus 432 l~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~~~~~~-------------~~~~~~~~~~~~~~~d~~-l~~~~~~~ 496 (526)
..||.... ...+.++|||||||+++|++||+.|...... ......+...-.+..+.. ........
T Consensus 195 ~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (351)
T 3mi9_A 195 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRK 274 (351)
T ss_dssp CCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCC
T ss_pred cCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccchhhcccccccccccC
Confidence 45675543 3468899999999999999999998432110 000001110000011000 00000011
Q ss_pred hHHHH------HHHHHHHHhcCCCCCCCCCCccccC
Q 009771 497 IVQDI------ILVSTIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 497 ~~~~~------~~~~~la~~C~~~~p~~RP~m~~v~ 526 (526)
..+.+ ..+.++...|++.+|++||++.||+
T Consensus 275 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l 310 (351)
T 3mi9_A 275 VKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDAL 310 (351)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred HHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHh
Confidence 11222 2366888899999999999998873
No 356
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=97.41 E-value=2.7e-05 Score=75.64 Aligned_cols=35 Identities=14% Similarity=0.158 Sum_probs=28.0
Q ss_pred CCchhccc-ccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.... ...+.++||||+||+++|++||+.|..
T Consensus 167 ~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~ 202 (324)
T 3mtl_A 167 RPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFP 202 (324)
T ss_dssp CCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred cChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 34665543 456889999999999999999999853
No 357
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=97.39 E-value=1e-05 Score=79.40 Aligned_cols=94 Identities=14% Similarity=-0.004 Sum_probs=50.7
Q ss_pred CCchhcccc-cccc-cccccccceeeeehhcCCCCCccccc------ccccc---CCCccccccccCCCCCCcccchHHH
Q 009771 432 LNGKLAHTM-VVTE-KCDVYSFGVVALEILMGRHPGELLSS------LSSSS---GPKIMLINVLDQRLSPPVNQKIVQD 500 (526)
Q Consensus 432 l~~~~~~~~-~~~~-k~dvysfGv~llElltg~~P~~~~~~------~~~~~---~~~~~~~~~~d~~l~~~~~~~~~~~ 500 (526)
..||..... ..+. ++||||||++++|++||+.|...... ..... .+.. ......+.............
T Consensus 217 ~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 295 (348)
T 2pml_X 217 MPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLD-RNHFLYPLTNKKSTCSNNFL 295 (348)
T ss_dssp CCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCCCCCCS-SSSSTTTTCC--------CC
T ss_pred cCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCcCCccc-hhhhhccccccccccchhhc
Confidence 346666544 4444 89999999999999999999542211 00000 0000 00000000000000000011
Q ss_pred HHHHHHHHHhcCCCCCCCCCCccccC
Q 009771 501 IILVSTIAFACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 501 ~~~~~~la~~C~~~~p~~RP~m~~v~ 526 (526)
-..+.++...|++.+|.+||++.||+
T Consensus 296 ~~~l~~li~~~L~~dP~~Rps~~e~l 321 (348)
T 2pml_X 296 SNEDIDFLKLFLRKNPAERITSEDAL 321 (348)
T ss_dssp CHHHHHHHHHHCCSSGGGSCCHHHHH
T ss_pred CHHHHHHHHHHccCChhhCCCHHHHh
Confidence 23456778899999999999998873
No 358
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=97.38 E-value=6.1e-06 Score=88.26 Aligned_cols=85 Identities=20% Similarity=0.257 Sum_probs=54.2
Q ss_pred CCCchhcccccccccccccccceeeeehhc-CCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHH
Q 009771 431 SLNGKLAHTMVVTEKCDVYSFGVVALEILM-GRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 431 ~l~~~~~~~~~~~~k~dvysfGv~llEllt-g~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
...||.......+.++|||||||+++|++| |+.|....... .....+.+....+.. . .....+.++..
T Consensus 558 y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~-------~~~~~i~~~~~~~~~-~---~~~~~l~~li~ 626 (656)
T 2j0j_A 558 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-------DVIGRIENGERLPMP-P---NCPPTLYSLMT 626 (656)
T ss_dssp GCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-------HHHHHHHHTCCCCCC-T---TCCHHHHHHHH
T ss_pred eeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH-------HHHHHHHcCCCCCCC-c---cccHHHHHHHH
Confidence 356787777778899999999999999997 88885421110 001111111100000 1 11234557788
Q ss_pred hcCCCCCCCCCCccccC
Q 009771 510 ACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v~ 526 (526)
.|++.+|++||+|.||+
T Consensus 627 ~~l~~dP~~RPs~~el~ 643 (656)
T 2j0j_A 627 KCWAYDPSRRPRFTELK 643 (656)
T ss_dssp HHTCSSGGGSCCHHHHH
T ss_pred HHcCCChhHCcCHHHHH
Confidence 99999999999998863
No 359
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=97.32 E-value=2e-05 Score=77.82 Aligned_cols=88 Identities=19% Similarity=0.232 Sum_probs=50.8
Q ss_pred CCchhccccccccc-ccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEK-CDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k-~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.........+ +||||+||+++|++||+.|........ .....+..+.......+...... ..+.++...
T Consensus 184 ~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~s---~~~~~li~~ 257 (361)
T 3uc3_A 184 IAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR---DYRKTIQRILSVKYSIPDDIRIS---PECCHLISR 257 (361)
T ss_dssp SCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC---CHHHHHHHHHTTCCCCCTTSCCC---HHHHHHHHH
T ss_pred CChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH---HHHHHHHHHhcCCCCCCCcCCCC---HHHHHHHHH
Confidence 45776655555444 899999999999999999954211100 00000111222221111101111 234567889
Q ss_pred cCCCCCCCCCCcccc
Q 009771 511 CLSSQPKSRPTMQRI 525 (526)
Q Consensus 511 C~~~~p~~RP~m~~v 525 (526)
|++.+|++||++.|+
T Consensus 258 ~L~~dP~~Rps~~el 272 (361)
T 3uc3_A 258 IFVADPATRISIPEI 272 (361)
T ss_dssp HSCSCTTTSCCHHHH
T ss_pred HccCChhHCcCHHHH
Confidence 999999999999886
No 360
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=97.31 E-value=5.1e-05 Score=75.21 Aligned_cols=35 Identities=20% Similarity=0.338 Sum_probs=29.2
Q ss_pred CCchhccc-ccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.... ...+.++|||||||+++|++||+.|..
T Consensus 208 ~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 243 (371)
T 4exu_A 208 RAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFK 243 (371)
T ss_dssp SCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCC
T ss_pred cCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCC
Confidence 45776554 567889999999999999999999954
No 361
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=97.29 E-value=1.5e-05 Score=82.19 Aligned_cols=86 Identities=20% Similarity=0.211 Sum_probs=51.7
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.... ..+.++||||+||+++|++||+.|....... .....+......... +.....-..+.++-..|
T Consensus 195 ~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-------~~~~~i~~~~~~~~~-~~~~~~s~~~~~li~~~ 265 (484)
T 3nyv_A 195 IAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY-------DILKKVEKGKYTFEL-PQWKKVSESAKDLIRKM 265 (484)
T ss_dssp CCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHCCCCCCS-GGGGGSCHHHHHHHHHH
T ss_pred cCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH-------HHHHHHHcCCCCCCC-cccccCCHHHHHHHHHH
Confidence 35676554 5788999999999999999999995421110 001111111111000 00001112345677899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|++||++.|++
T Consensus 266 L~~dp~~R~s~~e~l 280 (484)
T 3nyv_A 266 LTYVPSMRISARDAL 280 (484)
T ss_dssp TCSSGGGSCCHHHHH
T ss_pred CCCChhHCcCHHHHh
Confidence 999999999998863
No 362
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.29 E-value=5.3e-05 Score=66.98 Aligned_cols=63 Identities=16% Similarity=0.205 Sum_probs=29.4
Q ss_pred CCCCCEEeCCCC-CCCCC----CchhccCCCCCCEEEccCccCCcc----CCcccCCCCCCCEEEccCCCCC
Q 009771 100 FPNLQYLDLGSN-NLSGS----IPSQIDSLSNLTYIYLYENNLTGT----IPKEIGSLRNLEVLDLGSNNLN 162 (526)
Q Consensus 100 l~~L~~L~l~~n-~~~~~----~p~~l~~l~~L~~L~Ls~n~~~~~----ip~~l~~l~~L~~L~L~~n~l~ 162 (526)
-+.|+.|+|++| .+... +-..+..-+.|+.|+|++|.+... +-..+..-+.|++|+|++|.+.
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 445666666553 44321 333444455555555555555421 1122223344555555555544
No 363
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=97.29 E-value=2.6e-05 Score=75.75 Aligned_cols=33 Identities=15% Similarity=0.286 Sum_probs=27.5
Q ss_pred Cchhccc-ccccccccccccceeeeehhcCCCCC
Q 009771 433 NGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPG 465 (526)
Q Consensus 433 ~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~ 465 (526)
.||.... ...+.++||||+||+++|++||+.|.
T Consensus 198 aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~ 231 (330)
T 3nsz_A 198 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 231 (330)
T ss_dssp CHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSS
T ss_pred ChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCc
Confidence 4666544 45788999999999999999999995
No 364
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=97.28 E-value=3.7e-05 Score=76.97 Aligned_cols=85 Identities=12% Similarity=0.104 Sum_probs=49.8
Q ss_pred ccccccccccccceeeeehhcCCCCCccccccc---------cccCCCcccccc---------ccCCCCCCcccchHHHH
Q 009771 440 MVVTEKCDVYSFGVVALEILMGRHPGELLSSLS---------SSSGPKIMLINV---------LDQRLSPPVNQKIVQDI 501 (526)
Q Consensus 440 ~~~~~k~dvysfGv~llElltg~~P~~~~~~~~---------~~~~~~~~~~~~---------~d~~l~~~~~~~~~~~~ 501 (526)
...+.++|||||||+++|++||+.|......-. ....+...+..+ .+..+.... ......-
T Consensus 198 ~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~ 276 (396)
T 4eut_A 198 KKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSC-SLSRGLQ 276 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTC-SSCHHHH
T ss_pred cCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCccc-ccchHHH
Confidence 456789999999999999999999943211000 000011000000 001111111 1223344
Q ss_pred HHHHHHHHhcCCCCCCCCCCcccc
Q 009771 502 ILVSTIAFACLSSQPKSRPTMQRI 525 (526)
Q Consensus 502 ~~~~~la~~C~~~~p~~RP~m~~v 525 (526)
..+..+-..|++.+|++||++.|+
T Consensus 277 ~~l~~ll~~~L~~dP~~R~s~~e~ 300 (396)
T 4eut_A 277 VLLTPVLANILEADQEKCWGFDQF 300 (396)
T ss_dssp HHHHHHHHHHSCCCTTTSCCHHHH
T ss_pred hhchHHHHHhhccChhhhccHHHH
Confidence 556688899999999999999876
No 365
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.26 E-value=0.00013 Score=64.45 Aligned_cols=16 Identities=19% Similarity=0.283 Sum_probs=7.6
Q ss_pred CCCCCCeecCcCCcCc
Q 009771 346 NFSALSYLDLSDNRIC 361 (526)
Q Consensus 346 ~l~~L~~L~L~~n~l~ 361 (526)
..+.|++|+|+.|.|.
T Consensus 96 ~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 96 TSPSLRVLNVESNFLT 111 (197)
T ss_dssp HCSSCCEEECCSSBCC
T ss_pred cCCccCeEecCCCcCC
Confidence 3344455555555444
No 366
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=97.25 E-value=3.7e-05 Score=74.15 Aligned_cols=35 Identities=20% Similarity=0.243 Sum_probs=28.3
Q ss_pred CCchhccc-ccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.... ...+.++||||||++++|++||+.|..
T Consensus 191 ~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~ 226 (320)
T 2i6l_A 191 RSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFA 226 (320)
T ss_dssp CCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred cCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCC
Confidence 45665433 567889999999999999999999954
No 367
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=97.24 E-value=4.2e-05 Score=75.43 Aligned_cols=35 Identities=20% Similarity=0.145 Sum_probs=28.5
Q ss_pred CCchhccc-ccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.... ...+.++|||||||+++|++||+.|..
T Consensus 200 ~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~ 235 (362)
T 3pg1_A 200 RAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFR 235 (362)
T ss_dssp CCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred cCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCC
Confidence 45665544 457889999999999999999999954
No 368
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=97.23 E-value=4.1e-05 Score=76.85 Aligned_cols=35 Identities=17% Similarity=0.160 Sum_probs=28.6
Q ss_pred CCchhccc-ccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.... ...+.++|||||||+++|++||+.|..
T Consensus 202 ~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~ 237 (405)
T 3rgf_A 202 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 237 (405)
T ss_dssp CCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTC
T ss_pred cCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCC
Confidence 45776554 347889999999999999999999853
No 369
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=97.21 E-value=2.8e-05 Score=76.79 Aligned_cols=35 Identities=20% Similarity=0.208 Sum_probs=27.8
Q ss_pred CCchhcc-cccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAH-TMVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~-~~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||... ....+.++||||+||+++|++||+.|..
T Consensus 198 ~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~ 233 (364)
T 3qyz_A 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 233 (364)
T ss_dssp CCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred CCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCC
Confidence 3567533 3347889999999999999999999853
No 370
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=97.21 E-value=2.3e-05 Score=80.25 Aligned_cols=82 Identities=20% Similarity=0.254 Sum_probs=51.4
Q ss_pred CCchhccccc-ccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMV-VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~-~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||...... .+.++||||+||+++|++||+.|.+... . ......+.+.....+ ..... .+.++...
T Consensus 182 ~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~------~-~~~~~~i~~~~~~~p--~~~s~---~~~~Li~~ 249 (476)
T 2y94_A 182 AAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH------V-PTLFKKICDGIFYTP--QYLNP---SVISLLKH 249 (476)
T ss_dssp CCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSS------S-HHHHHHHHTTCCCCC--TTCCH---HHHHHHHH
T ss_pred EChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCC------H-HHHHHHHhcCCcCCC--ccCCH---HHHHHHHH
Confidence 4577665443 3678999999999999999999954210 0 001112222221111 11112 34567788
Q ss_pred cCCCCCCCCCCcccc
Q 009771 511 CLSSQPKSRPTMQRI 525 (526)
Q Consensus 511 C~~~~p~~RP~m~~v 525 (526)
|++.+|++||++.||
T Consensus 250 ~L~~dP~~Rpt~~ei 264 (476)
T 2y94_A 250 MLQVDPMKRATIKDI 264 (476)
T ss_dssp HTCSSTTTSCCHHHH
T ss_pred HcCCCchhCcCHHHH
Confidence 999999999999886
No 371
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=97.21 E-value=1.7e-05 Score=80.73 Aligned_cols=82 Identities=20% Similarity=0.249 Sum_probs=52.6
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|||||||+++|++||+.|...... ......+.......+ .... ..+.++...|
T Consensus 316 ~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-------~~~~~~i~~~~~~~p--~~~~---~~~~~li~~~ 383 (446)
T 4ejn_A 316 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-------EKLFELILMEEIRFP--RTLG---PEAKSLLSGL 383 (446)
T ss_dssp CCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHCCCCCC--TTSC---HHHHHHHHHH
T ss_pred cCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH-------HHHHHHHHhCCCCCC--ccCC---HHHHHHHHHH
Confidence 457877777889999999999999999999999532110 000111111111111 1111 2345677889
Q ss_pred CCCCCCCCC-----Ccccc
Q 009771 512 LSSQPKSRP-----TMQRI 525 (526)
Q Consensus 512 ~~~~p~~RP-----~m~~v 525 (526)
++.+|.+|| ++.|+
T Consensus 384 L~~dP~~R~~~~~~t~~el 402 (446)
T 4ejn_A 384 LKKDPKQRLGGGSEDAKEI 402 (446)
T ss_dssp TCSSTTTSTTCSTTTHHHH
T ss_pred cccCHHHhCCCCCCCHHHH
Confidence 999999999 77665
No 372
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=97.20 E-value=3.2e-05 Score=79.69 Aligned_cols=85 Identities=20% Similarity=0.170 Sum_probs=50.5
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.... ..+.++||||+||+++|++||+.|....... .....+......... +.....-..+.++-..|
T Consensus 190 ~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-------~~~~~i~~~~~~~~~-~~~~~~s~~~~~li~~~ 260 (486)
T 3mwu_A 190 IAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY-------DILKRVETGKYAFDL-PQWRTISDDAKDLIRKM 260 (486)
T ss_dssp CCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHTCCCSCS-GGGGGSCHHHHHHHHHH
T ss_pred CCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHhCCCCCCC-cccCCCCHHHHHHHHHH
Confidence 34666543 4778999999999999999999995321100 001111111111000 00000112345677899
Q ss_pred CCCCCCCCCCcccc
Q 009771 512 LSSQPKSRPTMQRI 525 (526)
Q Consensus 512 ~~~~p~~RP~m~~v 525 (526)
++.+|.+||++.|+
T Consensus 261 L~~dp~~R~t~~~~ 274 (486)
T 3mwu_A 261 LTFHPSLRITATQC 274 (486)
T ss_dssp TCSSTTTSCCHHHH
T ss_pred cCCChhhCcCHHHH
Confidence 99999999999886
No 373
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=97.20 E-value=3e-05 Score=76.08 Aligned_cols=35 Identities=17% Similarity=0.205 Sum_probs=28.2
Q ss_pred CCchhcc-cccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAH-TMVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~-~~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||... ....+.++|||||||+++|+++|+.|..
T Consensus 189 ~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 224 (353)
T 2b9h_A 189 RAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFP 224 (353)
T ss_dssp CCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCC
T ss_pred cCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCC
Confidence 4567543 3567889999999999999999999954
No 374
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=97.20 E-value=1.8e-05 Score=75.73 Aligned_cols=83 Identities=17% Similarity=0.267 Sum_probs=49.3
Q ss_pred CCchhccc-ccccccccccccceeeeehhcCCCCCccccccccccCCCccccccc--cCCCCCCcccchHHHHHHHHHHH
Q 009771 432 LNGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVL--DQRLSPPVNQKIVQDIILVSTIA 508 (526)
Q Consensus 432 l~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~--d~~l~~~~~~~~~~~~~~~~~la 508 (526)
..||.... ...+.++||||||++++|++|+..+....... ...+. .....+.. .......+.++.
T Consensus 197 ~aPE~~~~~~~~~~~~Di~slG~il~~l~~p~~~~~~~~~~---------~~~~~~~~~~~~~~~---~~~~~~~~~~li 264 (303)
T 1zy4_A 197 VATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNI---------LKKLRSVSIEFPPDF---DDNKMKVEKKII 264 (303)
T ss_dssp SCHHHHTSCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHH---------HHHHHSTTCCCCTTC---CTTTSHHHHHHH
T ss_pred cCcccccCCCCCcchhhHHHHHHHHHHHHhccCCchhHHHH---------HHhccccccccCccc---cccchHHHHHHH
Confidence 45776543 35788999999999999999844332110000 00010 11111111 111223455778
Q ss_pred HhcCCCCCCCCCCccccC
Q 009771 509 FACLSSQPKSRPTMQRIS 526 (526)
Q Consensus 509 ~~C~~~~p~~RP~m~~v~ 526 (526)
..|++.+|.+||++.|++
T Consensus 265 ~~~l~~dp~~Rps~~~ll 282 (303)
T 1zy4_A 265 RLLIDHDPNKRPGARTLL 282 (303)
T ss_dssp HHHTCSSGGGSCCHHHHH
T ss_pred HHHHhcCcccCcCHHHHh
Confidence 899999999999998863
No 375
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=97.19 E-value=1.8e-05 Score=78.03 Aligned_cols=86 Identities=20% Similarity=0.263 Sum_probs=48.7
Q ss_pred CCchhccc--ccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHH
Q 009771 432 LNGKLAHT--MVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 432 l~~~~~~~--~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
..||.... ...+.++|||||||+++|++||+.|....... .........+.......+ ... -..+.++..
T Consensus 227 ~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~---~~~~~~~~~~~~~~~~~~--~~~---~~~~~~li~ 298 (355)
T 1vzo_A 227 MAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEK---NSQAEISRRILKSEPPYP--QEM---SALAKDLIQ 298 (355)
T ss_dssp CCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSC---CCHHHHHHHHHHCCCCCC--TTS---CHHHHHHHH
T ss_pred cChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCcc---chHHHHHHHHhccCCCCC--ccc---CHHHHHHHH
Confidence 45776553 34678999999999999999999995421100 000000011111111100 111 123457788
Q ss_pred hcCCCCCCCCC-----Ccccc
Q 009771 510 ACLSSQPKSRP-----TMQRI 525 (526)
Q Consensus 510 ~C~~~~p~~RP-----~m~~v 525 (526)
.|++.+|.+|| ++.|+
T Consensus 299 ~~L~~dP~~R~~~~~~s~~el 319 (355)
T 1vzo_A 299 RLLMKDPKKRLGCGPRDADEI 319 (355)
T ss_dssp HHTCSSGGGSTTSSTTTHHHH
T ss_pred HHhhhCHHHhcCCCCCCHHHH
Confidence 99999999999 66665
No 376
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=97.19 E-value=2.7e-05 Score=80.40 Aligned_cols=86 Identities=19% Similarity=0.181 Sum_probs=51.4
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||... ...+.++||||+||+++|+++|+.|...... ......+......... ......-..+.++-..|
T Consensus 205 ~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-------~~~~~~i~~~~~~~~~-~~~~~~s~~~~~li~~~ 275 (494)
T 3lij_A 205 IAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTD-------QEILRKVEKGKYTFDS-PEWKNVSEGAKDLIKQM 275 (494)
T ss_dssp CCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHTCCCCCS-GGGTTSCHHHHHHHHHH
T ss_pred eCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCCCCCCc-hhcccCCHHHHHHHHHH
Confidence 4577655 4578899999999999999999999532110 0001111111111000 00000112345677899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|.+||++.||+
T Consensus 276 L~~dp~~R~s~~e~l 290 (494)
T 3lij_A 276 LQFDSQRRISAQQAL 290 (494)
T ss_dssp TCSSTTTSCCHHHHH
T ss_pred CCCChhhCccHHHHh
Confidence 999999999998863
No 377
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=97.18 E-value=6e-05 Score=73.84 Aligned_cols=34 Identities=15% Similarity=0.132 Sum_probs=27.5
Q ss_pred CCchhccc-ccccccccccccceeeeehhcCCCCC
Q 009771 432 LNGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPG 465 (526)
Q Consensus 432 l~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~ 465 (526)
..||.... ...+.++|||||||+++|+++|+.|.
T Consensus 179 ~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~ 213 (346)
T 1ua2_A 179 RAPELLFGARMYGVGVDMWAVGCILAELLLRVPFL 213 (346)
T ss_dssp CCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSS
T ss_pred cCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCC
Confidence 45776643 34678999999999999999999884
No 378
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=97.18 E-value=2.3e-05 Score=81.21 Aligned_cols=86 Identities=17% Similarity=0.133 Sum_probs=52.0
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||... ...+.++||||+||+++|+++|+.|...... ......+......... ......-..+.++-..|
T Consensus 215 ~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-------~~~~~~i~~~~~~~~~-~~~~~~s~~~~~li~~~ 285 (504)
T 3q5i_A 215 IAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQND-------QDIIKKVEKGKYYFDF-NDWKNISDEAKELIKLM 285 (504)
T ss_dssp CCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHCCCCCCH-HHHTTSCHHHHHHHHHH
T ss_pred CCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHcCCCCCCc-cccCCCCHHHHHHHHHH
Confidence 4577655 3578899999999999999999999532110 0001111111111000 00000012355677899
Q ss_pred CCCCCCCCCCccccC
Q 009771 512 LSSQPKSRPTMQRIS 526 (526)
Q Consensus 512 ~~~~p~~RP~m~~v~ 526 (526)
++.+|.+||++.||+
T Consensus 286 L~~dp~~R~t~~e~l 300 (504)
T 3q5i_A 286 LTYDYNKRCTAEEAL 300 (504)
T ss_dssp TCSSTTTSCCHHHHH
T ss_pred cCCChhHCCCHHHHh
Confidence 999999999998863
No 379
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=97.16 E-value=3.3e-05 Score=75.48 Aligned_cols=82 Identities=18% Similarity=0.284 Sum_probs=51.1
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|+||+||+++|++||+.|..... .......+......-+ .....+ +..+-..|
T Consensus 172 ~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~-------~~~~~~~i~~~~~~~p--~~~s~~---~~~li~~l 239 (337)
T 1o6l_A 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-------HERLFELILMEEIRFP--RTLSPE---AKSLLAGL 239 (337)
T ss_dssp CCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS-------HHHHHHHHHHCCCCCC--TTSCHH---HHHHHHHH
T ss_pred CChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCC-------HHHHHHHHHcCCCCCC--CCCCHH---HHHHHHHH
Confidence 45777766678899999999999999999999953210 0000111211111111 111122 34566789
Q ss_pred CCCCCCCCC-----Ccccc
Q 009771 512 LSSQPKSRP-----TMQRI 525 (526)
Q Consensus 512 ~~~~p~~RP-----~m~~v 525 (526)
++.+|++|| ++.||
T Consensus 240 L~~dP~~R~g~~~~~~~ei 258 (337)
T 1o6l_A 240 LKKDPKQRLGGGPSDAKEV 258 (337)
T ss_dssp TCSSTTTSTTCSTTTHHHH
T ss_pred hhcCHHHhcCCCCCCHHHH
Confidence 999999999 66654
No 380
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=97.16 E-value=8.9e-05 Score=72.82 Aligned_cols=35 Identities=20% Similarity=0.338 Sum_probs=28.7
Q ss_pred CCchhccc-ccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.... ...+.++||||||++++|++||+.|..
T Consensus 190 ~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~ 225 (353)
T 3coi_A 190 RAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFK 225 (353)
T ss_dssp SCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSB
T ss_pred CCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 45776544 567889999999999999999999954
No 381
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=97.16 E-value=5.4e-05 Score=76.41 Aligned_cols=36 Identities=28% Similarity=0.241 Sum_probs=29.2
Q ss_pred CCCchhcccc-cccccccccccceeeeehhcCCCCCc
Q 009771 431 SLNGKLAHTM-VVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 431 ~l~~~~~~~~-~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
...||..... ..+.++|||||||+++|++||+.|..
T Consensus 222 y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~ 258 (420)
T 1j1b_A 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP 258 (420)
T ss_dssp SCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred cCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCC
Confidence 3457766443 67889999999999999999999853
No 382
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=97.14 E-value=0.00011 Score=73.19 Aligned_cols=35 Identities=23% Similarity=0.237 Sum_probs=28.3
Q ss_pred CCchhcccc-cccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHTM-VVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~~-~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||..... ..+.++|+||+||++.||+||+.|..
T Consensus 229 ~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~ 264 (398)
T 4b99_A 229 RAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFP 264 (398)
T ss_dssp CCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSC
T ss_pred cCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCC
Confidence 457765443 45889999999999999999999943
No 383
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=97.13 E-value=2.7e-05 Score=76.37 Aligned_cols=82 Identities=16% Similarity=0.244 Sum_probs=51.9
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|+||+||+++|++||+.|...... ......+......-+ ..... .+..+-..|
T Consensus 185 ~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-------~~~~~~i~~~~~~~p--~~~s~---~~~~li~~l 252 (345)
T 1xjd_A 185 IAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE-------EELFHSIRMDNPFYP--RWLEK---EAKDLLVKL 252 (345)
T ss_dssp CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHCCCCCC--TTSCH---HHHHHHHHH
T ss_pred CChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH-------HHHHHHHHhCCCCCC--cccCH---HHHHHHHHH
Confidence 457777666788999999999999999999999532100 000111111111101 11112 344667899
Q ss_pred CCCCCCCCCCcc-cc
Q 009771 512 LSSQPKSRPTMQ-RI 525 (526)
Q Consensus 512 ~~~~p~~RP~m~-~v 525 (526)
+..+|++||++. ||
T Consensus 253 L~~dp~~R~~~~~~i 267 (345)
T 1xjd_A 253 FVREPEKRLGVRGDI 267 (345)
T ss_dssp SCSSGGGSBTTBSCG
T ss_pred hcCCHhHcCCChHHH
Confidence 999999999997 65
No 384
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=97.10 E-value=2e-05 Score=75.11 Aligned_cols=79 Identities=13% Similarity=0.045 Sum_probs=45.7
Q ss_pred cccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhcCCCCCCCCC
Q 009771 441 VVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFACLSSQPKSRP 520 (526)
Q Consensus 441 ~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP 520 (526)
..+.++|||||||+++|++||+.|......... .. .....+........ ......-..+.++...|++.+|++|
T Consensus 178 ~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~--~~--~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~dP~~R- 251 (286)
T 3uqc_A 178 DANPQDDIRGIGASLYALLVNRWPLPEAGVRSG--LA--PAERDTAGQPIEPA-DIDRDIPFQISAVAARSVQGDGGIR- 251 (286)
T ss_dssp TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCC--SE--ECCBCTTSCBCCHH-HHCTTSCHHHHHHHHHHHCTTSSCC-
T ss_pred CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchh--hH--HHHHHhccCCCChh-hcccCCCHHHHHHHHHHcccCCccC-
Confidence 468899999999999999999999543211100 00 00001111110000 0000011235577889999999999
Q ss_pred Ccccc
Q 009771 521 TMQRI 525 (526)
Q Consensus 521 ~m~~v 525 (526)
++.|+
T Consensus 252 s~~el 256 (286)
T 3uqc_A 252 SASTL 256 (286)
T ss_dssp CHHHH
T ss_pred CHHHH
Confidence 99886
No 385
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=97.10 E-value=4.1e-05 Score=75.25 Aligned_cols=78 Identities=14% Similarity=0.156 Sum_probs=49.7
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|+|||||+++|++||+.|..... +......+......-+ ..... .+..+-..|
T Consensus 205 ~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~-------~~~~~~~i~~~~~~~p--~~~~~---~~~~li~~l 272 (350)
T 1rdq_E 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ-------PIQIYEKIVSGKVRFP--SHFSS---DLKDLLRNL 272 (350)
T ss_dssp CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-------HHHHHHHHHHCCCCCC--TTCCH---HHHHHHHHH
T ss_pred cCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCC-------HHHHHHHHHcCCCCCC--CCCCH---HHHHHHHHH
Confidence 45777666678899999999999999999999953211 0001112222222111 11112 344667899
Q ss_pred CCCCCCCCCC
Q 009771 512 LSSQPKSRPT 521 (526)
Q Consensus 512 ~~~~p~~RP~ 521 (526)
++.+|.+||+
T Consensus 273 L~~dp~~R~~ 282 (350)
T 1rdq_E 273 LQVDLTKRFG 282 (350)
T ss_dssp SCSCTTTCTT
T ss_pred hhcCHHhccC
Confidence 9999999998
No 386
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=97.10 E-value=6.2e-05 Score=74.93 Aligned_cols=35 Identities=23% Similarity=0.238 Sum_probs=28.5
Q ss_pred CCchhccc-ccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.... ...+.++||||+||+++|+++|+.|..
T Consensus 208 ~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~ 243 (383)
T 3eb0_A 208 RAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFS 243 (383)
T ss_dssp CCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred cCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCC
Confidence 45776544 347889999999999999999999854
No 387
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=97.09 E-value=3.4e-05 Score=80.96 Aligned_cols=84 Identities=21% Similarity=0.198 Sum_probs=51.9
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccC--CCCCCcccchHHHHHHHHHHHH
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQ--RLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~--~l~~~~~~~~~~~~~~~~~la~ 509 (526)
..||.......+.++|+||+||++.||++|+.|...... ......+... ...........++ +..+-.
T Consensus 323 ~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~-------~~~~~~i~~~~~~~~~~~~~~~s~~---~~dli~ 392 (573)
T 3uto_A 323 AAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND-------DETLRNVKSCDWNMDDSAFSGISED---GKDFIR 392 (573)
T ss_dssp CCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH-------HHHHHHHHTTCCCCCSGGGTTSCHH---HHHHHH
T ss_pred cCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-------HHHHHHHHhCCCCCCcccccCCCHH---HHHHHH
Confidence 457777777788999999999999999999999532110 0001111111 1111000111122 335567
Q ss_pred hcCCCCCCCCCCcccc
Q 009771 510 ACLSSQPKSRPTMQRI 525 (526)
Q Consensus 510 ~C~~~~p~~RP~m~~v 525 (526)
.|++.+|.+||++.|+
T Consensus 393 ~~L~~dp~~R~t~~e~ 408 (573)
T 3uto_A 393 KLLLADPNTRMTIHQA 408 (573)
T ss_dssp TTSCSSGGGSCCHHHH
T ss_pred HHccCChhHCcCHHHH
Confidence 8999999999999876
No 388
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=97.06 E-value=0.0001 Score=73.46 Aligned_cols=35 Identities=23% Similarity=0.222 Sum_probs=28.1
Q ss_pred CCchhccc-ccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.... ...+.++||||+||++.|++||+.|..
T Consensus 197 ~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~ 232 (388)
T 3oz6_A 197 RAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFP 232 (388)
T ss_dssp CCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred CCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCC
Confidence 34665543 467889999999999999999999843
No 389
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=97.04 E-value=9.6e-05 Score=73.09 Aligned_cols=35 Identities=23% Similarity=0.345 Sum_probs=28.7
Q ss_pred CCchhccc-ccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.... ...+.++||||+||++.|++||+.|..
T Consensus 196 ~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~ 231 (367)
T 2fst_X 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 231 (367)
T ss_dssp CCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCC
T ss_pred cChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 45776544 567889999999999999999999843
No 390
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=97.04 E-value=6.4e-05 Score=73.88 Aligned_cols=79 Identities=16% Similarity=0.288 Sum_probs=50.6
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|+||+||+++|+++|+.|..... .......++.....-+ .... ..+..+...|
T Consensus 188 ~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~-------~~~~~~~i~~~~~~~p--~~~s---~~~~~li~~l 255 (353)
T 2i0e_A 188 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED-------EDELFQSIMEHNVAYP--KSMS---KEAVAICKGL 255 (353)
T ss_dssp CCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS-------HHHHHHHHHHCCCCCC--TTSC---HHHHHHHHHH
T ss_pred cChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCC-------HHHHHHHHHhCCCCCC--CCCC---HHHHHHHHHH
Confidence 45777766678899999999999999999999953210 0011122222222111 1111 2345677889
Q ss_pred CCCCCCCCCCc
Q 009771 512 LSSQPKSRPTM 522 (526)
Q Consensus 512 ~~~~p~~RP~m 522 (526)
+..+|.+||++
T Consensus 256 L~~dP~~R~~~ 266 (353)
T 2i0e_A 256 MTKHPGKRLGC 266 (353)
T ss_dssp TCSCTTSCTTC
T ss_pred hhcCHHHcCCC
Confidence 99999999975
No 391
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=97.03 E-value=9.3e-05 Score=73.93 Aligned_cols=35 Identities=23% Similarity=0.235 Sum_probs=28.2
Q ss_pred CCchhccc-ccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.... ...+.++|||||||+++|+++|+.|..
T Consensus 208 ~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~ 243 (394)
T 4e7w_A 208 RAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFP 243 (394)
T ss_dssp CCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred cCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 45676543 347889999999999999999999954
No 392
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=97.01 E-value=6e-05 Score=72.93 Aligned_cols=82 Identities=17% Similarity=0.210 Sum_probs=52.1
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|+||+||+++|+++|+.|...... ......++.....-+ ....+ .+.++--.|
T Consensus 170 ~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-------~~~~~~i~~~~~~~p--~~~~~---~~~~li~~l 237 (318)
T 1fot_A 170 IAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT-------MKTYEKILNAELRFP--PFFNE---DVKDLLSRL 237 (318)
T ss_dssp CCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH-------HHHHHHHHHCCCCCC--TTSCH---HHHHHHHHH
T ss_pred cCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCCCCCC--CCCCH---HHHHHHHHH
Confidence 467877777788999999999999999999999532100 001122222222111 11112 244566789
Q ss_pred CCCCCCCCC-----Ccccc
Q 009771 512 LSSQPKSRP-----TMQRI 525 (526)
Q Consensus 512 ~~~~p~~RP-----~m~~v 525 (526)
+..+|++|| ++.||
T Consensus 238 L~~dp~~R~~~~~~~~~~i 256 (318)
T 1fot_A 238 ITRDLSQRLGNLQNGTEDV 256 (318)
T ss_dssp TCSCTTTCTTSSTTTTHHH
T ss_pred hccCHHHcCCCcCCCHHHH
Confidence 999999999 66554
No 393
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=97.01 E-value=5.3e-05 Score=74.25 Aligned_cols=86 Identities=16% Similarity=0.347 Sum_probs=51.1
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCcccccccccc--CCCccccccccCCCCCCcccchHHHHHHHHHHHH
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSS--GPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~--~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
..||.......+.++|+||+||+++|++||+.|......-.... ........+......-+ .... ..+..+-.
T Consensus 177 ~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p--~~~s---~~~~~li~ 251 (345)
T 3a8x_A 177 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP--RSLS---VKAASVLK 251 (345)
T ss_dssp CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCC--TTSC---HHHHHHHH
T ss_pred cCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCC--CCCC---HHHHHHHH
Confidence 45777766678899999999999999999999964321100000 00000111222222111 1111 23446678
Q ss_pred hcCCCCCCCCCCc
Q 009771 510 ACLSSQPKSRPTM 522 (526)
Q Consensus 510 ~C~~~~p~~RP~m 522 (526)
.|++.+|++||+.
T Consensus 252 ~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 252 SFLNKDPKERLGC 264 (345)
T ss_dssp HHTCSSTTTSTTC
T ss_pred HHhcCCHhHCCCC
Confidence 8999999999996
No 394
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=97.01 E-value=0.00011 Score=74.87 Aligned_cols=33 Identities=27% Similarity=0.221 Sum_probs=26.4
Q ss_pred CCchhc-ccccccccccccccceeeeehhcCCCC
Q 009771 432 LNGKLA-HTMVVTEKCDVYSFGVVALEILMGRHP 464 (526)
Q Consensus 432 l~~~~~-~~~~~~~k~dvysfGv~llElltg~~P 464 (526)
..||.. .....+.++|||||||+++||+||..|
T Consensus 250 ~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~ 283 (458)
T 3rp9_A 250 RAPELILLQENYTEAIDVWSIGCIFAELLNMIKE 283 (458)
T ss_dssp CCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTT
T ss_pred cChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccc
Confidence 457753 445688999999999999999997554
No 395
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=96.99 E-value=0.00015 Score=71.59 Aligned_cols=35 Identities=20% Similarity=0.337 Sum_probs=28.6
Q ss_pred CCchhccc-ccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAHT-MVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~~-~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||.... ...+.++||||+||++.|++||+.|..
T Consensus 192 ~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~ 227 (367)
T 1cm8_A 192 RAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFK 227 (367)
T ss_dssp CCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred CCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCC
Confidence 34666544 567889999999999999999999943
No 396
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=96.99 E-value=4.1e-05 Score=74.46 Aligned_cols=80 Identities=18% Similarity=0.189 Sum_probs=50.4
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|||||||+++|+++|+.|...... ......++.....-+ ....+ .+.++-..|
T Consensus 188 ~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-------~~~~~~i~~~~~~~p--~~~~~---~~~~li~~~ 255 (327)
T 3a62_A 188 MAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR-------KKTIDKILKCKLNLP--PYLTQ---EARDLLKKL 255 (327)
T ss_dssp SCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-------HHHHHHHHHTCCCCC--TTSCH---HHHHHHHHH
T ss_pred cCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCH-------HHHHHHHHhCCCCCC--CCCCH---HHHHHHHHH
Confidence 457777666778999999999999999999999542110 001112222221111 11112 344667899
Q ss_pred CCCCCCCCCCcc
Q 009771 512 LSSQPKSRPTMQ 523 (526)
Q Consensus 512 ~~~~p~~RP~m~ 523 (526)
++.+|.+||++.
T Consensus 256 L~~dp~~R~~~~ 267 (327)
T 3a62_A 256 LKRNAASRLGAG 267 (327)
T ss_dssp SCSCGGGSTTSS
T ss_pred HhcCHhhccCCC
Confidence 999999999543
No 397
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=96.99 E-value=3.2e-05 Score=76.09 Aligned_cols=79 Identities=18% Similarity=0.281 Sum_probs=51.0
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|+||+||+++|++||+.|..... .......++.....-+ ....+ .+..+-..|
T Consensus 191 ~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~-------~~~~~~~i~~~~~~~p--~~~~~---~~~~li~~l 258 (353)
T 3txo_A 191 IAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN-------EDDLFEAILNDEVVYP--TWLHE---DATGILKSF 258 (353)
T ss_dssp CCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSS-------HHHHHHHHHHCCCCCC--TTSCH---HHHHHHHHH
T ss_pred EChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCC-------HHHHHHHHHcCCCCCC--CCCCH---HHHHHHHHH
Confidence 45777776778899999999999999999999953211 0111122222222111 11112 244667789
Q ss_pred CCCCCCCCCCc
Q 009771 512 LSSQPKSRPTM 522 (526)
Q Consensus 512 ~~~~p~~RP~m 522 (526)
++.+|.+||++
T Consensus 259 L~~dP~~R~~~ 269 (353)
T 3txo_A 259 MTKNPTMRLGS 269 (353)
T ss_dssp TCSSGGGSTTS
T ss_pred hhhCHHHccCC
Confidence 99999999997
No 398
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=96.97 E-value=0.00016 Score=71.07 Aligned_cols=34 Identities=29% Similarity=0.354 Sum_probs=27.6
Q ss_pred CCchhcccc-cccccccccccceeeeehhcCCCCC
Q 009771 432 LNGKLAHTM-VVTEKCDVYSFGVVALEILMGRHPG 465 (526)
Q Consensus 432 l~~~~~~~~-~~~~k~dvysfGv~llElltg~~P~ 465 (526)
..||..... ..+.++|+||+||++.||+||+.|.
T Consensus 213 ~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf 247 (361)
T 4f9c_A 213 RAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPF 247 (361)
T ss_dssp CCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSS
T ss_pred cCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCC
Confidence 347765443 4688899999999999999999994
No 399
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=96.95 E-value=8.1e-05 Score=74.32 Aligned_cols=86 Identities=16% Similarity=0.316 Sum_probs=51.6
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccC--CCccccccccCCCCCCcccchHHHHHHHHHHHH
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSG--PKIMLINVLDQRLSPPVNQKIVQDIILVSTIAF 509 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~--~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~ 509 (526)
..||.......+.++|+||+||+++||+||+.|............ .+.....+....+.-+. . ... .+..+-.
T Consensus 220 ~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~-~-~s~---~~~~li~ 294 (396)
T 4dc2_A 220 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR-S-LSV---KAASVLK 294 (396)
T ss_dssp CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCCT-T-SCH---HHHHHHH
T ss_pred CCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCCC-c-CCH---HHHHHHH
Confidence 457777777788999999999999999999999643211100000 00001112222222111 1 112 3446677
Q ss_pred hcCCCCCCCCCCc
Q 009771 510 ACLSSQPKSRPTM 522 (526)
Q Consensus 510 ~C~~~~p~~RP~m 522 (526)
.|++.+|.+||+.
T Consensus 295 ~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 295 SFLNKDPKERLGC 307 (396)
T ss_dssp HHTCSCTTTSTTC
T ss_pred HHhcCCHhHcCCC
Confidence 8999999999986
No 400
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=96.95 E-value=4e-05 Score=75.99 Aligned_cols=81 Identities=20% Similarity=0.220 Sum_probs=51.9
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|+|||||+++|+++|+.|...... ......++...+.-+ ..... .+..+-..|
T Consensus 206 ~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-------~~~~~~i~~~~~~~~--~~~~~---~~~~li~~l 273 (373)
T 2r5t_A 206 LAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT-------AEMYDNILNKPLQLK--PNITN---SARHLLEGL 273 (373)
T ss_dssp CCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH-------HHHHHHHHHSCCCCC--SSSCH---HHHHHHHHH
T ss_pred cCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH-------HHHHHHHHhcccCCC--CCCCH---HHHHHHHHH
Confidence 567877777788999999999999999999999532100 001122222222111 11112 244667789
Q ss_pred CCCCCCCCCCccc
Q 009771 512 LSSQPKSRPTMQR 524 (526)
Q Consensus 512 ~~~~p~~RP~m~~ 524 (526)
++.+|.+||++.+
T Consensus 274 L~~dp~~R~~~~~ 286 (373)
T 2r5t_A 274 LQKDRTKRLGAKD 286 (373)
T ss_dssp TCSSGGGSTTTTT
T ss_pred cccCHHhCCCCCC
Confidence 9999999999853
No 401
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=96.93 E-value=6.7e-05 Score=77.98 Aligned_cols=85 Identities=20% Similarity=0.233 Sum_probs=52.5
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|+|||||+++||+||+.|....... .........+.......+ ..... .+..+-..|
T Consensus 356 ~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~---~~~~~~~~~i~~~~~~~p--~~~s~---~~~~li~~l 427 (543)
T 3c4z_A 356 MAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK---VENKELKQRVLEQAVTYP--DKFSP---ASKDFCEAL 427 (543)
T ss_dssp SCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCC---CCHHHHHHHHHHCCCCCC--TTSCH---HHHHHHHHH
T ss_pred cChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccc---hhHHHHHHHHhhcccCCC--cccCH---HHHHHHHHh
Confidence 5688777777889999999999999999999995421100 000001111222222111 11112 334566789
Q ss_pred CCCCCCCCCCccc
Q 009771 512 LSSQPKSRPTMQR 524 (526)
Q Consensus 512 ~~~~p~~RP~m~~ 524 (526)
++.+|++||++.+
T Consensus 428 L~~dP~~R~~~~~ 440 (543)
T 3c4z_A 428 LQKDPEKRLGFRD 440 (543)
T ss_dssp SCSSGGGSCCCBT
T ss_pred ccCCHhHCCCCcc
Confidence 9999999998754
No 402
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=96.88 E-value=0.00013 Score=73.95 Aligned_cols=34 Identities=21% Similarity=0.165 Sum_probs=27.2
Q ss_pred CCchhc-ccccccccccccccceeeeehhcCCCCC
Q 009771 432 LNGKLA-HTMVVTEKCDVYSFGVVALEILMGRHPG 465 (526)
Q Consensus 432 l~~~~~-~~~~~~~k~dvysfGv~llElltg~~P~ 465 (526)
..||.. .....+.++||||+||+++|++||..|.
T Consensus 218 ~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~ 252 (432)
T 3n9x_A 218 RAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH 252 (432)
T ss_dssp CCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred cCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence 457753 4456788999999999999999987763
No 403
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=96.87 E-value=9.1e-05 Score=79.38 Aligned_cols=79 Identities=16% Similarity=0.303 Sum_probs=52.2
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||.......+.++|+|||||+++||+||+.|..... .......++.....-+ ..... .+..+-..|
T Consensus 509 ~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~-------~~~~~~~i~~~~~~~p--~~~s~---~~~~li~~l 576 (674)
T 3pfq_A 509 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED-------EDELFQSIMEHNVAYP--KSMSK---EAVAICKGL 576 (674)
T ss_dssp CCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS-------HHHHHHHHHSSCCCCC--TTSCH---HHHHHHHHH
T ss_pred cCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCC-------HHHHHHHHHhCCCCCC--ccCCH---HHHHHHHHH
Confidence 45888777788999999999999999999999954210 0111222232222211 11112 344667789
Q ss_pred CCCCCCCCCCc
Q 009771 512 LSSQPKSRPTM 522 (526)
Q Consensus 512 ~~~~p~~RP~m 522 (526)
++.+|++||++
T Consensus 577 L~~dP~~R~~~ 587 (674)
T 3pfq_A 577 MTKHPGKRLGC 587 (674)
T ss_dssp SCSSSTTCTTC
T ss_pred ccCCHHHCCCC
Confidence 99999999997
No 404
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=96.75 E-value=0.00011 Score=73.08 Aligned_cols=84 Identities=20% Similarity=0.254 Sum_probs=48.2
Q ss_pred CCchhccc---ccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHH
Q 009771 432 LNGKLAHT---MVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIA 508 (526)
Q Consensus 432 l~~~~~~~---~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la 508 (526)
..||.... ...+.++|+|||||+++|++||+.|....... ........+.......+ .... ..+..+.
T Consensus 181 ~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~----~~~~~~~~~~~~~~~~p--~~~s---~~~~~li 251 (384)
T 4fr4_A 181 MAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSST----SSKEIVHTFETTVVTYP--SAWS---QEMVSLL 251 (384)
T ss_dssp CCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTS----CHHHHHHHHHHCCCCCC--TTSC---HHHHHHH
T ss_pred cCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCc----cHHHHHHHHhhcccCCC--CcCC---HHHHHHH
Confidence 34665532 24678999999999999999999995421100 00000111111111111 1111 2345667
Q ss_pred HhcCCCCCCCCCC-ccc
Q 009771 509 FACLSSQPKSRPT-MQR 524 (526)
Q Consensus 509 ~~C~~~~p~~RP~-m~~ 524 (526)
..|++.+|.+||+ +.+
T Consensus 252 ~~lL~~dP~~R~s~~~~ 268 (384)
T 4fr4_A 252 KKLLEPNPDQRFSQLSD 268 (384)
T ss_dssp HHHSCSSGGGSCCSHHH
T ss_pred HHHhcCCHhHhcccHHH
Confidence 7899999999998 444
No 405
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=96.52 E-value=0.00011 Score=76.60 Aligned_cols=81 Identities=12% Similarity=0.133 Sum_probs=48.8
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccc-cccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLIN-VLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~-~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
..||.......+.++|||||||+++|++||+.|....... .....+.. +......-+ ..... .+..+...
T Consensus 352 ~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~----~~~~~i~~~i~~~~~~~p--~~~s~---~~~dLI~~ 422 (576)
T 2acx_A 352 MAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK----IKREEVERLVKEVPEEYS--ERFSP---QARSLCSQ 422 (576)
T ss_dssp CCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSC----CCHHHHHHHHHHCCCCCC--TTSCH---HHHHHHHH
T ss_pred cCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccc----hhHHHHHHHhhcccccCC--ccCCH---HHHHHHHH
Confidence 4577777677889999999999999999999995421100 00000111 111111000 11112 34466778
Q ss_pred cCCCCCCCCCC
Q 009771 511 CLSSQPKSRPT 521 (526)
Q Consensus 511 C~~~~p~~RP~ 521 (526)
|++.+|.+||+
T Consensus 423 lL~~dP~~R~g 433 (576)
T 2acx_A 423 LLCKDPAERLG 433 (576)
T ss_dssp HTCSSGGGSTT
T ss_pred hccCCHHHcCC
Confidence 99999999994
No 406
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=96.45 E-value=0.00034 Score=68.97 Aligned_cols=34 Identities=9% Similarity=0.046 Sum_probs=30.5
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCC
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPG 465 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~ 465 (526)
..||.......+.++|||||||+++|++||+.|.
T Consensus 252 ~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf 285 (365)
T 3e7e_A 252 QCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMK 285 (365)
T ss_dssp CCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCC
T ss_pred CChHHhcCCCCCccccHHHHHHHHHHHHhCCCcc
Confidence 5688887777899999999999999999999994
No 407
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.40 E-value=0.0055 Score=50.30 Aligned_cols=36 Identities=33% Similarity=0.394 Sum_probs=16.2
Q ss_pred CCCEEEccCccCCccCCcccCCCCCCCEEEccCCCC
Q 009771 126 NLTYIYLYENNLTGTIPKEIGSLRNLEVLDLGSNNL 161 (526)
Q Consensus 126 ~L~~L~Ls~n~~~~~ip~~l~~l~~L~~L~L~~n~l 161 (526)
+|++|+|++|+++...+..|..+++|++|+|++|.+
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 344555555554433333344444444444444433
No 408
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.38 E-value=0.0063 Score=49.94 Aligned_cols=56 Identities=23% Similarity=0.249 Sum_probs=35.4
Q ss_pred EEEccCccCC-ccCCcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccCCcCC
Q 009771 129 YIYLYENNLT-GTIPKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDGNKLS 186 (526)
Q Consensus 129 ~L~Ls~n~~~-~~ip~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~ 186 (526)
.++.+++.++ ..+|..+. ++|++|+|++|+++..-+..|..+++|++|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5666666664 24554432 45777888888777544445666777777777777654
No 409
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=96.30 E-value=0.00012 Score=73.53 Aligned_cols=84 Identities=20% Similarity=0.304 Sum_probs=47.6
Q ss_pred CCchhccccc----ccccccccccceeeeehhcCCCCCccccccccccCCCccccccccC--CCCCCcccchHHHHHHHH
Q 009771 432 LNGKLAHTMV----VTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQ--RLSPPVNQKIVQDIILVS 505 (526)
Q Consensus 432 l~~~~~~~~~----~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~--~l~~~~~~~~~~~~~~~~ 505 (526)
..||...... .+.++|||||||+++||+||+.|..... .......++.. .+..+......+++.
T Consensus 236 ~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~-------~~~~~~~i~~~~~~~~~p~~~~~s~~~~--- 305 (410)
T 3v8s_A 236 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS-------LVGTYSKIMNHKNSLTFPDDNDISKEAK--- 305 (410)
T ss_dssp CCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSS-------HHHHHHHHHTHHHHCCCCTTCCCCHHHH---
T ss_pred cCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCC-------hhhHHHHHHhccccccCCCcccccHHHH---
Confidence 3466654333 6789999999999999999999953210 00011111111 011010011123333
Q ss_pred HHHHhcCCCCCCC--CCCcccc
Q 009771 506 TIAFACLSSQPKS--RPTMQRI 525 (526)
Q Consensus 506 ~la~~C~~~~p~~--RP~m~~v 525 (526)
.+-..|+..+|.+ ||++.||
T Consensus 306 ~li~~lL~~~~~rlgR~~~~ei 327 (410)
T 3v8s_A 306 NLICAFLTDREVRLGRNGVEEI 327 (410)
T ss_dssp HHHHHHSSCGGGCTTSSCHHHH
T ss_pred HHHHHHccChhhhCCCCCHHHH
Confidence 4455677788888 9999876
No 410
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=96.09 E-value=0.00063 Score=73.12 Aligned_cols=75 Identities=12% Similarity=0.111 Sum_probs=48.2
Q ss_pred CCchhcccccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHhc
Q 009771 432 LNGKLAHTMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFAC 511 (526)
Q Consensus 432 l~~~~~~~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C 511 (526)
..||..... .+.++|||||||+++|+++|..|.... +. . .+.. . ......-..+.++...|
T Consensus 244 ~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~--~~-----~---------~~~~-~-~~~~~~~~~l~~li~~~ 304 (681)
T 2pzi_A 244 QAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGR--YV-----D---------GLPE-D-DPVLKTYDSYGRLLRRA 304 (681)
T ss_dssp SCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTE--EC-----S---------SCCT-T-CHHHHHCHHHHHHHHHH
T ss_pred cCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccc--cc-----c---------cccc-c-ccccccCHHHHHHHhhh
Confidence 457766543 388999999999999999998774310 10 0 0000 0 11111223456788899
Q ss_pred CCCCCCCCCCcccc
Q 009771 512 LSSQPKSRPTMQRI 525 (526)
Q Consensus 512 ~~~~p~~RP~m~~v 525 (526)
++.+|++||+..++
T Consensus 305 l~~dP~~R~~~~~~ 318 (681)
T 2pzi_A 305 IDPDPRQRFTTAEE 318 (681)
T ss_dssp TCSSGGGSCSSHHH
T ss_pred ccCChhhCCCHHHH
Confidence 99999999976543
No 411
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=96.00 E-value=0.00024 Score=71.90 Aligned_cols=35 Identities=26% Similarity=0.446 Sum_probs=28.8
Q ss_pred CCchhcc-----cccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAH-----TMVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~-----~~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||+.. ....+.++|||||||+++||+||+.|..
T Consensus 243 ~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~ 282 (437)
T 4aw2_A 243 ISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFY 282 (437)
T ss_dssp CCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTC
T ss_pred eChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCC
Confidence 4577654 4467889999999999999999999953
No 412
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=95.86 E-value=0.00031 Score=70.49 Aligned_cols=35 Identities=29% Similarity=0.501 Sum_probs=28.4
Q ss_pred CCchhcc-------cccccccccccccceeeeehhcCCCCCc
Q 009771 432 LNGKLAH-------TMVVTEKCDVYSFGVVALEILMGRHPGE 466 (526)
Q Consensus 432 l~~~~~~-------~~~~~~k~dvysfGv~llElltg~~P~~ 466 (526)
..||... ....+.++|+|||||+++|++||+.|..
T Consensus 230 ~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~ 271 (412)
T 2vd5_A 230 LSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFY 271 (412)
T ss_dssp CCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTC
T ss_pred CCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCC
Confidence 4566654 3457889999999999999999999953
No 413
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=95.60 E-value=0.00072 Score=71.24 Aligned_cols=82 Identities=12% Similarity=0.185 Sum_probs=48.5
Q ss_pred CCchhcc-cccccccccccccceeeeehhcCCCCCccccccccccCCCccccccccCCCCCCcccchHHHHHHHHHHHHh
Q 009771 432 LNGKLAH-TMVVTEKCDVYSFGVVALEILMGRHPGELLSSLSSSSGPKIMLINVLDQRLSPPVNQKIVQDIILVSTIAFA 510 (526)
Q Consensus 432 l~~~~~~-~~~~~~k~dvysfGv~llElltg~~P~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~ 510 (526)
+.||... ....+.++|+||+||++.||+||+.|...-..- ........+......-+ .....+ +..+-..
T Consensus 357 mAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~----~~~~i~~~i~~~~~~~p--~~~S~~---a~dLI~~ 427 (689)
T 3v5w_A 357 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK----DKHEIDRMTLTMAVELP--DSFSPE---LRSLLEG 427 (689)
T ss_dssp CCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCC----CHHHHHHHHHHCCCCCC--TTSCHH---HHHHHHH
T ss_pred cCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH----HHHHHHHhhcCCCCCCC--ccCCHH---HHHHHHH
Confidence 4577764 345788999999999999999999995321100 00000111222222111 111123 3456678
Q ss_pred cCCCCCCCCCCc
Q 009771 511 CLSSQPKSRPTM 522 (526)
Q Consensus 511 C~~~~p~~RP~m 522 (526)
|+..+|.+|++.
T Consensus 428 lL~~dP~~Rl~~ 439 (689)
T 3v5w_A 428 LLQRDVNRRLGC 439 (689)
T ss_dssp HTCSCGGGCTTC
T ss_pred HccCCHhHCCCC
Confidence 999999999983
No 414
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=31.92 E-value=67 Score=24.13 Aligned_cols=13 Identities=8% Similarity=-0.008 Sum_probs=5.4
Q ss_pred hccCCCCCCEEEc
Q 009771 120 QIDSLSNLTYIYL 132 (526)
Q Consensus 120 ~l~~l~~L~~L~L 132 (526)
+|.+|.+|+.+.+
T Consensus 15 aF~~c~~L~~i~i 27 (100)
T 2lz0_A 15 LFAGNTVIREITV 27 (100)
T ss_dssp TTTTCTTCCCEEE
T ss_pred HhcCCCCCcEEEc
Confidence 3334444444444
No 415
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=20.44 E-value=1.4e+02 Score=22.28 Aligned_cols=40 Identities=15% Similarity=0.116 Sum_probs=22.7
Q ss_pred CcccCCCCCCCEEEccCCCCCCCCccccCCCCCCCEEEccC
Q 009771 142 PKEIGSLRNLEVLDLGSNNLNGTIPIEIGSVRNLETLSLDG 182 (526)
Q Consensus 142 p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~ 182 (526)
...|.++.+|+.+.+-.+ ++..-...|.++.+|+.+.+..
T Consensus 13 ~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 13 KSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp SCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred HHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 345667777777766543 2223334566666666666554
Done!