Query 009772
Match_columns 526
No_of_seqs 246 out of 1347
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 12:39:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009772.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009772hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3l1l_A Arginine/agmatine antip 99.6 4.6E-14 1.6E-18 148.4 25.4 378 100-505 6-401 (445)
2 3gia_A Uncharacterized protein 99.4 1.1E-10 3.6E-15 122.6 26.5 239 101-363 5-248 (444)
3 4djk_A Probable glutamate/gamm 99.2 5.1E-09 1.7E-13 111.8 27.5 245 100-366 9-264 (511)
4 2jln_A MHP1; hydantoin, transp 98.5 0.00011 3.7E-09 78.1 29.7 289 102-418 25-330 (501)
5 3dh4_A Sodium/glucose cotransp 97.5 0.12 4E-06 55.0 30.8 147 102-263 20-167 (530)
6 2xq2_A Sodium/glucose cotransp 97.4 0.048 1.7E-06 58.8 25.6 147 101-262 48-195 (593)
7 2a65_A Leutaa, Na(+):neurotran 94.1 6.6 0.00023 41.2 32.0 216 104-324 9-268 (519)
8 2wsw_A BCCT family betaine/car 43.8 2.4E+02 0.0082 29.2 12.7 90 168-264 179-272 (509)
9 3gia_A Uncharacterized protein 23.9 3.7E+02 0.013 26.4 10.4 47 169-216 259-305 (444)
10 4ain_A Glycine betaine transpo 20.5 1.5E+02 0.0052 30.9 6.5 48 169-218 181-229 (539)
No 1
>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A
Probab=99.63 E-value=4.6e-14 Score=148.36 Aligned_cols=378 Identities=15% Similarity=0.098 Sum_probs=204.1
Q ss_pred cccCCChhHHHHHHHhhhhhhhhchhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHchhhcCCccccCHHHHHHHHhc
Q 009772 100 ESRNGNAHYAAFHNLNAGVGFQALLLPVAFAFLGWSWGILSLTIAYCWQLYTLWILVQLHEAVPGKRYNRYVELAQAAFG 179 (526)
Q Consensus 100 ~~~~~s~~~a~~~l~~~~iG~GiL~LP~af~~~G~~~giill~~~~~~~~~t~~lL~~~~~~~~g~r~~sY~~l~~~~~G 179 (526)
++|+-+.++.++..+++++|+|++.+|...++.|. .+++..++.++........+.+...+.|. ...+.+.+++.+|
T Consensus 6 ~~r~l~~~~~~~l~ig~~iG~Gif~~~~~~~~~G~-~~~~~~li~~~~~~~~a~~~~el~~~~p~--~Gg~y~~~~~~~G 82 (445)
T 3l1l_A 6 DAHKVGLIPVTLMVSGAIMGSGVFLLPANLASTGG-IAIYGWLVTIIGALGLSMVYAKMSFLDPS--PGGSYAYARRCFG 82 (445)
T ss_dssp -CCCBCHHHHHHHHHHHHCSSHHHHHHHHHHHHCT-HHHHHHHHHHHHHHHHHHHHHHHHHHCCC--TTTHHHHHHHHSC
T ss_pred CCCcccHHHHHHHHHHhHHhhhHHhhHHHHHHhhh-HHHHHHHHHHHHHHHHHHHHHHHHccCCC--CCCchhhHHhHcC
Confidence 34678899999999999999999999999998886 47778888888888888888888765553 3367778899999
Q ss_pred ccchhHHHHHHHHHHHHHhHHHHHHhhhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHH-HHhhhcCCCcchhhHhHHH
Q 009772 180 ERLGVWLALFPTVYLSAGTATTLILLGGETMKMFFQIVCGPLCSSNPLTTVEWYLVFTSL-CIVLSQLPNLNSIAGLSLI 258 (526)
Q Consensus 180 ~~~g~~~~~~~i~~~~~g~~v~yii~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ii~~~v-~~~L~~l~~l~~l~~~S~~ 258 (526)
|++|........+.. .....++....++.+..+++... .....+.+...++ .+.+...+..+..+++..+
T Consensus 83 ~~~g~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~in~~g~~~~~~~~~~ 153 (445)
T 3l1l_A 83 PFLGYQTNVLYWLAC-WIGNIAMVVIGVGYLSYFFPILK--------DPWVLTITCVVVLWIFVLLNIVGPKMITRVQAV 153 (445)
T ss_dssp HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHTTTTCGGGG--------SHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHCcccc--------ccHHHHHHHHHHHHHHHHHHHhchHHHHHHHHH
Confidence 988887765544433 33344455555555443322110 0011111111111 1112234556666666555
Q ss_pred HHHHHHHHHHhhhhhhcccCCCCCCCCCCCCCCCCcchHHHHHHHHHHHHHhhccccchHHHHhhCCCCCCCCCccccch
Q 009772 259 GAITAVTYSTMVWVLSVSQPRPPNISYEPLSSASPAATVFSVMNALGIIAFAFRGHNLAMEIQATMPSTFKHPAHVPMWR 338 (526)
Q Consensus 259 ~~~~~~~~~~ii~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~a~gii~faf~~h~~i~~I~~~m~~~~k~p~~~~m~~ 338 (526)
.....+...+++++..+....+++.. +++. .....++.++..++....|+|.|...+..+.+|+ |+|+| +..|
T Consensus 154 ~~~~~i~~~~~~~i~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~af~G~e~~~~~~~e~----k~p~r-~ip~ 226 (445)
T 3l1l_A 154 ATVLALIPIVGIAVFGWFWFRGETYM-AAWN-VSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVV----KNPKR-NVPI 226 (445)
T ss_dssp HHHHHHHHHHHHHHTTSTTCCCCCCC-CC------------HHHHHHHHHHTTTTTTHHHHGGGGB----SSHHH-HHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhChhhcc-cccC-ccCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHh----cCccc-cccH
Confidence 44433332222222222222211111 1011 1111235678889999999999999999999999 88854 4459
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhcCCCCCC---hhHhHhhhhccCCCCchHHHHHHHHHHHHHHHhhhhccchhHHHHHH
Q 009772 339 GAKVAYLFIAMCLFPVAIGGFWAYGNLMPS---GGMLRALFQFHSHDISRGLLAVTFLLVVFNCLSSFQIYSMPVFDSFE 415 (526)
Q Consensus 339 v~~~a~~i~~~~Y~~~gi~Gy~~fG~~~~~---g~il~~l~~~~~~~~~~~~~~~~~~~~~i~~l~sypl~~~p~~~~le 415 (526)
++..+..++.++|....+......+.+... ....+.+.+.. .++...+..+...+..+.+.-...+..-+.+.
T Consensus 227 a~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~~sR~~~ 302 (445)
T 3l1l_A 227 ATIGGVLIAAVCYVLSTTAIMGMIPNAALRVSASPFGDAARMAL----GDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAK 302 (445)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCTTTSCSTTCTHHHHHHHHH----CTTHHHHHHHHHHHHHTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCHHHHhccCcHHHHHHHHHh----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988877776643211 12222221111 12333344555555555554433333322222
Q ss_pred hh-----hcc---ccccccccchhhhhHHHHHHHHHHHHHh--cc----chHHHHHHhhhhhhchhhhHhhHHHHHhhCC
Q 009772 416 AS-----YTS---RTNRPCSIWVRSGFRVFYGFVSFFIGVA--LP----FLSSLAGLLGGLTLPVTFAYPCFMWVLIKKP 481 (526)
Q Consensus 416 ~~-----~~~---~~~~~~~~~~r~~~r~~~~~~~~~iA~~--vP----~~~~vi~lvGa~~~~l~filP~l~~lk~~~~ 481 (526)
.. +++ +.++ +....+.+.-. .+++.++++. .| .++.+.++.+ ++..+.|+++++.+++.+++
T Consensus 303 ~~a~dg~lP~~~~~~~~-~~~P~~a~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~y~~~~~~~~~~r~~ 378 (445)
T 3l1l_A 303 AAADDGLFPPIFARVNK-AGTPVAGLIIV--GILMTIFQLSSISPNATKEFGLVSSVSV-IFTLVPYLYTCAALLLLGHG 378 (445)
T ss_dssp HHHHTTSSCGGGGCCCT-TCCCHHHHHHH--HHHHHHHHHSTTSHHHHCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHSS
T ss_pred HHHhCCCCcHHHHhcCC-CCCCHHHHHHH--HHHHHHHHHHHHcccHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhhc
Confidence 21 111 1111 11111111111 1222222222 23 2455555443 22378999999999998775
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHH
Q 009772 482 TKYSFNWYFNWILGWLGVAFSLAF 505 (526)
Q Consensus 482 ~~~~~~~~~~~~l~~~g~~~~v~g 505 (526)
+. +.++...+.+.++|.+.+++.
T Consensus 379 ~~-~~r~~~~~~~~~~~~~~~~~~ 401 (445)
T 3l1l_A 379 HF-GKARPAYLAVTTIAFLYCIWA 401 (445)
T ss_dssp SS-GGGCTTTHHHHHHHHHHHHHH
T ss_pred Cc-ccccchhHHHHHHHHHHHHHH
Confidence 54 222222334444444444333
No 2
>3gia_A Uncharacterized protein MJ0609; membrane protein, transporter, cell membrane, membrane, transmembrane, transport protein; HET: D10 BCN; 2.32A {Methanocaldococcus jannaschii} PDB: 3gi9_C* 3gi8_C
Probab=99.38 E-value=1.1e-10 Score=122.59 Aligned_cols=239 Identities=8% Similarity=0.028 Sum_probs=146.7
Q ss_pred ccCCChhHHHHHHHhhhhhhhhchhHHH-HHHhchHHHHHHHHHHHHHHHHHHHHHHHchhhcCCccccCHHHHHHHHhc
Q 009772 101 SRNGNAHYAAFHNLNAGVGFQALLLPVA-FAFLGWSWGILSLTIAYCWQLYTLWILVQLHEAVPGKRYNRYVELAQAAFG 179 (526)
Q Consensus 101 ~~~~s~~~a~~~l~~~~iG~GiL~LP~a-f~~~G~~~giill~~~~~~~~~t~~lL~~~~~~~~g~r~~sY~~l~~~~~G 179 (526)
+|+-+.++..+..+++++|+|++.+|.. .+..|- .+++..++.+++...+...+.+...+.|. .....+.+++.+|
T Consensus 5 ~r~l~~~~~~~l~~g~~iG~gi~~~~~~~~~~~G~-~~~~~~li~~~~~~~~~~~~~el~~~~P~--~Gg~y~~~~~~~G 81 (444)
T 3gia_A 5 NKKLSLWEAVSMAVGVMIGASIFSIFGVGAKIAGR-NLPETFILSGIYALLVAYSYTKLGAKIVS--NAGPIAFIHKAIG 81 (444)
T ss_dssp CCCBCHHHHHHHHHHHHHHHHTTTSHHHHHHHHGG-GHHHHHHHHHHHHHHHHHHHHHHHTTCCC--TTTHHHHHHHHHC
T ss_pred CCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHhhCCC--CCcHHHhHHHHhC
Confidence 4678999999999999999999998744 455665 56777778888888888888888765553 3356788999999
Q ss_pred ccc-hhHHHHHHHHHHHHHhHHHHHHhhhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHH---HHhhhcCCCcchhhHh
Q 009772 180 ERL-GVWLALFPTVYLSAGTATTLILLGGETMKMFFQIVCGPLCSSNPLTTVEWYLVFTSL---CIVLSQLPNLNSIAGL 255 (526)
Q Consensus 180 ~~~-g~~~~~~~i~~~~~g~~v~yii~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ii~~~v---~~~L~~l~~l~~l~~~ 255 (526)
+++ +.++.....+ .....+..+....++.+..++ +. .....+..+...+ .+.+...+..+..+++
T Consensus 82 ~~~~~g~~~~~~~~-~~~~~~a~~~~~~~~~~~~~~----~~------~~~~~~~~~~~~~~~~~~~~in~~g~~~~~~~ 150 (444)
T 3gia_A 82 DNIITGALSILLWM-SYVISIALFAKGFAGYFLPLI----NA------PINTFNIAITEIGIVAFFTALNFFGSKAVGRA 150 (444)
T ss_dssp SSHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT----TC------CCCHHHHHHHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred cchHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHh----CC------CCchHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 963 3333222222 212334445555555554332 11 1112222111111 1122234556666666
Q ss_pred HHHHHHHHHHHHHhhhhhhcccCCCCCCCCCCCCCCCCcchHHHHHHHHHHHHHhhccccchHHHHhhCCCCCCCCCccc
Q 009772 256 SLIGAITAVTYSTMVWVLSVSQPRPPNISYEPLSSASPAATVFSVMNALGIIAFAFRGHNLAMEIQATMPSTFKHPAHVP 335 (526)
Q Consensus 256 S~~~~~~~~~~~~ii~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~a~gii~faf~~h~~i~~I~~~m~~~~k~p~~~~ 335 (526)
..+.....+...+++++.++....+++ +. +...+..+.+++.++....|+|.|...+....+|+ |+|+| +
T Consensus 151 ~~~~~~~~i~~~~~~ii~~~~~~~~~~--~~---~~~~~~g~~~~~~~~~~~~~a~~G~e~~~~~~~e~----k~P~r-~ 220 (444)
T 3gia_A 151 EFFIVLVKLLILGLFIFAGLITIHPSY--VI---PDLAPSAVSGMIFASAIFFLSYMGFGVITNASEHI----ENPKK-N 220 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCGGG--TS---CCCSHHHHHHHHHHHHHGGGGGTHHHHHHTTGGGB----SSHHH-H
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcChhh--cC---CCCCCcchHHHHHHHHHHHHHHHhHHHHHHHHHHc----cCccc-c
Confidence 555444333322222222222222111 11 11223456678888999999999999999999999 88854 3
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHhcC
Q 009772 336 MWRGAKVAYLFIAMCLFPVAIGGFWAYG 363 (526)
Q Consensus 336 m~~v~~~a~~i~~~~Y~~~gi~Gy~~fG 363 (526)
..|++..+..++.++|....+......+
T Consensus 221 ip~ai~~~~~~~~~~y~~~~~~~~~~~~ 248 (444)
T 3gia_A 221 VPRAIFISILIVMFVYVGVAISAIGNLP 248 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4599999999999999988776655543
No 3
>4djk_A Probable glutamate/gamma-aminobutyrate antiporter; LEUT, glutamate-GABA antiporter, transport protein; 3.10A {Escherichia coli} PDB: 4dji_A
Probab=99.20 E-value=5.1e-09 Score=111.77 Aligned_cols=245 Identities=9% Similarity=0.047 Sum_probs=124.5
Q ss_pred cccCCChhHHHHHHHhhhhhhhhchhHHHHHHhchHHHHHHHHHHHHHH-HHHHHHHHHchh--hcCCccccCHHHHHHH
Q 009772 100 ESRNGNAHYAAFHNLNAGVGFQALLLPVAFAFLGWSWGILSLTIAYCWQ-LYTLWILVQLHE--AVPGKRYNRYVELAQA 176 (526)
Q Consensus 100 ~~~~~s~~~a~~~l~~~~iG~GiL~LP~af~~~G~~~giill~~~~~~~-~~t~~lL~~~~~--~~~g~r~~sY~~l~~~ 176 (526)
.+|+-+.++.+...++.++| +.++|. .+..|.. +++..++.+++. ..+...+.+... +.| . ......+++
T Consensus 9 ~~r~l~~~~~~~l~~~~~ig--~~~~~~-~~~~G~~-~~~~~~i~~~~~~l~~al~~ael~s~~~~P-~--GG~y~~~~~ 81 (511)
T 4djk_A 9 KAKQLTLLGFFAITASMVMA--VYEYPT-FATSGFS-LVFFLLLGGILWFIPVGLCAAEMATVDGWE-E--GGVFAWVSN 81 (511)
T ss_dssp ---CCCHHHHHHHTGGGGCC--GGGHHH-HHTTTTH-HHHHHHHHHHHTHHHHHHHHHHHHTTSCC------CHHHHHHH
T ss_pred cCccccHHHHHHHHHHHHHh--hchhHH-HHhhHHH-HHHHHHHHHHHHHHHHHHHHHHHcccccCC-C--CChhhhHHh
Confidence 34678999999999999986 567775 4667753 333333333332 224555556554 444 2 266678899
Q ss_pred HhcccchhHHHHHHHHHHHHHhHHHHHHhhhhhHHHHHHHHhCCCCCCCCCCcc-hhhHHHHHH-HHhhhcCCCcchhhH
Q 009772 177 AFGERLGVWLALFPTVYLSAGTATTLILLGGETMKMFFQIVCGPLCSSNPLTTV-EWYLVFTSL-CIVLSQLPNLNSIAG 254 (526)
Q Consensus 177 ~~G~~~g~~~~~~~i~~~~~g~~v~yii~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~ii~~~v-~~~L~~l~~l~~l~~ 254 (526)
.+|+++|........+.. .....++....++.+..++. .... ..... .+.+...++ .+.+.-.+..+...+
T Consensus 82 ~~g~~~g~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~p~~---~~~~~~~~~~~~~~~~~~~~in~~g~~~~~~ 154 (511)
T 4djk_A 82 TLGPRWGFAAISFGYLQI-AIGFIPMLYFVLGALSYILK---WPAL---NEDPITKTIAALIILWALALTQFGGTKYTAR 154 (511)
T ss_dssp HHCHHHHHHHHHHHHHHH-HHHTHHHHHHHHHHHHTTTT---CGGG---TSCSSHHHHHHHHHHHHHHHHHHTCSSSHHH
T ss_pred hcCchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhc---Cccc---ccCcHHHHHHHHHHHHHHHHHHHhChHHHHH
Confidence 999988865544333322 32333333444444332210 1001 01111 111111111 111222445555555
Q ss_pred hHHHHHHH-HHHHHHhhhhhhc---ccCCCCC--CCCCCCCCCCCcchHHHHHHHHHHHHHhhccccchHHHHhhCCCCC
Q 009772 255 LSLIGAIT-AVTYSTMVWVLSV---SQPRPPN--ISYEPLSSASPAATVFSVMNALGIIAFAFRGHNLAMEIQATMPSTF 328 (526)
Q Consensus 255 ~S~~~~~~-~~~~~~ii~~~~i---~~~~~~~--~~~~~~~~~~~~~~~~~~~~a~gii~faf~~h~~i~~I~~~m~~~~ 328 (526)
+..+..+. .+...+++++.++ ..+.+.+ .+.++.. +.....+...++....|+|.|...+..+-+|+
T Consensus 155 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~a~~G~e~~~~~a~E~---- 227 (511)
T 4djk_A 155 IAKVGFFAGILLPAFILIALAAIYLHSGAPVAIEMDSKTFF---PDFSKVGTLVVFVAFILSYMGVEASATHVNEM---- 227 (511)
T ss_dssp HTHHHHHHTTHHHHHHHHHHHHHHTC------------CCC---CCTTSTTTTTTHHHHHHHHTTGGGGTGGGSSS----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCcccccC---CCcccchHHHHHHHHHHHHhhHHHHHHHHHhc----
Confidence 55443222 1111111111111 1121111 1111100 00111123345777899999999999999999
Q ss_pred CCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 009772 329 KHPAHVPMWRGAKVAYLFIAMCLFPVAIGGFWAYGNLM 366 (526)
Q Consensus 329 k~p~~~~m~~v~~~a~~i~~~~Y~~~gi~Gy~~fG~~~ 366 (526)
|+|+| +..|++..++.+++++|+...+.-....+++.
T Consensus 228 k~P~k-~ip~ai~~~~~~~~~~y~~~~~~~~~~~~~~~ 264 (511)
T 4djk_A 228 SNPGR-DYPLAMLLLMVAAICLSSVGGLSIAMVIPGNE 264 (511)
T ss_dssp SCCTT-THHHHHHHHHHHHHHHHHHHHHHHHTTSCTTS
T ss_pred cCccc-chhHHHHHHHHHHHHHHHHHHHHHHeecCHhh
Confidence 88864 45599999999999999999888777766543
No 4
>2jln_A MHP1; hydantoin, transporter, membrane protein, nucleobase-cation-symport-1 family; 2.85A {Microbacterium liquefaciens} PDB: 2jlo_A* 2x79_A
Probab=98.49 E-value=0.00011 Score=78.08 Aligned_cols=289 Identities=10% Similarity=0.051 Sum_probs=139.9
Q ss_pred cCCChhHHHHHHHhhhhhhhhchhHHHHHH-hchHHHHHHHHHHHHHHHHHHHHHHHchhhcCCccccCHHHHHHHHhcc
Q 009772 102 RNGNAHYAAFHNLNAGVGFQALLLPVAFAF-LGWSWGILSLTIAYCWQLYTLWILVQLHEAVPGKRYNRYVELAQAAFGE 180 (526)
Q Consensus 102 ~~~s~~~a~~~l~~~~iG~GiL~LP~af~~-~G~~~giill~~~~~~~~~t~~lL~~~~~~~~g~r~~sY~~l~~~~~G~ 180 (526)
|+.++++-+..-+...++.+.+.+...+.. .++..+++.+++..++...-+.++.....+. ..+|.++.|..||+
T Consensus 25 R~~~~~~~~~~W~g~~~~i~~~~~Ga~~~~GLs~~~a~lai~lG~li~~~~~~l~~~~G~~~----Gl~~~v~~R~~FG~ 100 (501)
T 2jln_A 25 RSVGPFSLAAIWFAMAIQVAIFIAAGQMTSSFQVWQVIVAIAAGCTIAVILLFFTQSAAIRW----GINFTVAARMPFGI 100 (501)
T ss_dssp CCBCHHHHHHHHHHHHCSTHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHHHHHTHHHHHH----CCCHHHHTTTTSCT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHhHHHhhc----CCChhhhhHhhcch
Confidence 455655554444444444444444433332 3344555554444444433333333332211 34799999999999
Q ss_pred cchhHHHHHHHHHHHHHhHHHHHHhhhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhhcCCCcchhhHhHHHHH
Q 009772 181 RLGVWLALFPTVYLSAGTATTLILLGGETMKMFFQIVCGPLCSSNPLTTVEWYLVFTSLCIVLSQLPNLNSIAGLSLIGA 260 (526)
Q Consensus 181 ~~g~~~~~~~i~~~~~g~~v~yii~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ii~~~v~~~L~~l~~l~~l~~~S~~~~ 260 (526)
+.++ +..+.....++|-...-....++.+..++....+. .....+++++.++.+++. ...++.+.++..+..
T Consensus 101 ~Gs~-i~~ll~~i~~igw~~v~~~~gg~al~~~~~~~~g~------~~~~v~~~i~~~l~~~~~-~~G~~~i~~~~~~~~ 172 (501)
T 2jln_A 101 RGSL-IPITLKALLSLFWFGFQTWLGALALDEITRLLTGF------TNLPLWIVIFGAIQVVTT-FYGITFIRWMNVFAS 172 (501)
T ss_dssp TTTH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC------CCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHH
T ss_pred hHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc------chHHHHHHHHHHHHHHHH-HhCHHHHHHHHHHHH
Confidence 7444 44555555557776666667788888776654431 112344555666666665 556777877777765
Q ss_pred HHHHHHHHhhhhhhcccCCC--CCC-CCCCCCCCCCcchHHHHHHHHHH-HHHhhccccchHHHHhhCCCCCCCCCc---
Q 009772 261 ITAVTYSTMVWVLSVSQPRP--PNI-SYEPLSSASPAATVFSVMNALGI-IAFAFRGHNLAMEIQATMPSTFKHPAH--- 333 (526)
Q Consensus 261 ~~~~~~~~ii~~~~i~~~~~--~~~-~~~~~~~~~~~~~~~~~~~a~gi-i~faf~~h~~i~~I~~~m~~~~k~p~~--- 333 (526)
...+...+.+.+..+.+... .+. +.. . ....+.+..++.. +.+.-....+.++..+.+ |+++.
T Consensus 173 p~~~i~~i~~~~~~l~~~g~~~~~~~~~~---~---~~~~~~f~~ai~~~~~~~~~~~~~~~DysRy~----~~~~~~~~ 242 (501)
T 2jln_A 173 PVLLAMGVYMVYLMLDGADVSLGEVMSMG---G---ENPGMPFSTAIMIFVGGWIAVVVSIHDIVKEC----KVDPNASR 242 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCHHHHTTCC---C---SSCCSCHHHHHHHHHTTTHHHHTTTHHHHTTB----CCCTTCCH
T ss_pred HHHHHHHHHHHHHHHHhcCCcchhhhccC---C---ccchHHHHHHHHHHHHHHHHHHhccCcccccC----CCCccccc
Confidence 44433333222222222111 000 111 0 0112233444433 222223346678889999 43433
Q ss_pred cccc-------hhhHHHHHHHHHHHHHHHHHHHHhcCCCCCChhHhHhhhhccCCCCchHHHHHHH-HHHHHHHHhhhhc
Q 009772 334 VPMW-------RGAKVAYLFIAMCLFPVAIGGFWAYGNLMPSGGMLRALFQFHSHDISRGLLAVTF-LLVVFNCLSSFQI 405 (526)
Q Consensus 334 ~~m~-------~v~~~a~~i~~~~Y~~~gi~Gy~~fG~~~~~g~il~~l~~~~~~~~~~~~~~~~~-~~~~i~~l~sypl 405 (526)
+..+ ....++..+...+...+|+..-...+...+ .+++.... +++.+...+.. +.++++.+++--.
T Consensus 243 ~~~~~~~~~~~~g~~lG~~i~~~~~~~lG~~~~~~~~~~dp-~~~l~~~l-----~~~~~~~~~~~~~~~~la~i~tn~~ 316 (501)
T 2jln_A 243 EGQTKADARYATAQWLGMVPASIIFGFIGAASMVLVGEWNP-VIAITEVV-----GGVSIPMAILFQVFVLLATWSTNPA 316 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCH-HHHHHHHH-----TCCCHHHHHHHHHHHHHHHHTTHHH
T ss_pred cchhhccchHHHHHHHHHHHHHHHHHHHHHHHHHhccccCH-HHHHHHHh-----ccchHHHHHHHHHHHHHHHHHHHHH
Confidence 1111 222334445555555555544334433333 25554421 22222123334 4555555454443
Q ss_pred -cchhHHHHHHhhh
Q 009772 406 -YSMPVFDSFEASY 418 (526)
Q Consensus 406 -~~~p~~~~le~~~ 418 (526)
..++.-..+...+
T Consensus 317 ~n~ys~~~~l~~~~ 330 (501)
T 2jln_A 317 ANLLSPAYTLCSTF 330 (501)
T ss_dssp HHTHHHHHHHHHHS
T ss_pred hhHHHHHHHHHHhC
Confidence 5666666666654
No 5
>3dh4_A Sodium/glucose cotransporter; membrane protein, symporter, sugar transport, SGLT, ION TRAN membrane, sodium transport, symport; HET: GAL; 2.70A {Vibrio parahaemolyticus}
Probab=97.52 E-value=0.12 Score=55.00 Aligned_cols=147 Identities=13% Similarity=0.090 Sum_probs=70.3
Q ss_pred cCCChhHHHHHHHhhhhhhh-hchhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHchhhcCCccccCHHHHHHHHhcc
Q 009772 102 RNGNAHYAAFHNLNAGVGFQ-ALLLPVAFAFLGWSWGILSLTIAYCWQLYTLWILVQLHEAVPGKRYNRYVELAQAAFGE 180 (526)
Q Consensus 102 ~~~s~~~a~~~l~~~~iG~G-iL~LP~af~~~G~~~giill~~~~~~~~~t~~lL~~~~~~~~g~r~~sY~~l~~~~~G~ 180 (526)
|+-+++...+.+..+.+++. .+++|-.....|+......... ++......+.+..-.++ .+..|..|.-++-||+
T Consensus 20 R~l~~~~~~~s~~at~~Sa~~~lG~~g~~y~~G~~~~~~~~~~-~~~~~i~~~~~~p~~~~---~~~~T~~e~l~~Rfg~ 95 (530)
T 3dh4_A 20 KSLPWWAVGASLIAANISAEQFIGMSGSGYSIGLAIASYEWMS-AITLIIVGKYFLPIFIE---KGIYTIPEFVEKRFNK 95 (530)
T ss_dssp SCCCHHHHHHHHHHHHCSHHHHTHHHHHHHHTCGGGHHHHHHH-HHHHHHHHHHTHHHHHH---TTCCSHHHHHHHHTCH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHH-HHHHHHHHHHHHHHHHH---cCCccHHHHHHHHcCc
Confidence 56778888888877777664 5778888888887432111111 00001111111111121 2257999999999999
Q ss_pred cchhHHHHHHHHHHHHHhHHHHHHhhhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhhcCCCcchhhHhHHHHH
Q 009772 181 RLGVWLALFPTVYLSAGTATTLILLGGETMKMFFQIVCGPLCSSNPLTTVEWYLVFTSLCIVLSQLPNLNSIAGLSLIGA 260 (526)
Q Consensus 181 ~~g~~~~~~~i~~~~~g~~v~yii~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ii~~~v~~~L~~l~~l~~l~~~S~~~~ 260 (526)
+.+.+...+.++...+..+.+-+...+..++ ...+ .+...-+++.+++++..+..--++...+.-.+=.
T Consensus 96 ~~~~~~a~~~l~~~~~~~~~~~l~~~~~~~~----~~~G-------i~~~~~i~i~~~i~~~Yt~~GGl~aV~~TD~iQ~ 164 (530)
T 3dh4_A 96 KLKTILAVFWISLYIFVNLTSVLYLGGLALE----TILG-------IPLMYSILGLALFALVYSIYGGLSAVVWTDVIQV 164 (530)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHHH----HHTT-------CCHHHHHHHHHHHHHHTTC------CCSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHhC-------CCHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 7544433322221111112222222233333 3332 2233334445555566777888888877766554
Q ss_pred HHH
Q 009772 261 ITA 263 (526)
Q Consensus 261 ~~~ 263 (526)
+..
T Consensus 165 ~im 167 (530)
T 3dh4_A 165 FFL 167 (530)
T ss_dssp HHH
T ss_pred HHH
Confidence 433
No 6
>2xq2_A Sodium/glucose cotransporter; transport protein, inverted repeats, LEUT-fold, galactose; 2.73A {Vibrio parahaemolyticus} PDB: 2xq2_B 2kpe_A
Probab=97.36 E-value=0.048 Score=58.82 Aligned_cols=147 Identities=12% Similarity=0.085 Sum_probs=69.3
Q ss_pred ccCCChhHHHHHHHhhhhhhh-hchhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHchhhcCCccccCHHHHHHHHhc
Q 009772 101 SRNGNAHYAAFHNLNAGVGFQ-ALLLPVAFAFLGWSWGILSLTIAYCWQLYTLWILVQLHEAVPGKRYNRYVELAQAAFG 179 (526)
Q Consensus 101 ~~~~s~~~a~~~l~~~~iG~G-iL~LP~af~~~G~~~giill~~~~~~~~~t~~lL~~~~~~~~g~r~~sY~~l~~~~~G 179 (526)
.|+-+++...+.+..+.+++. .++.|-...+.|+......... .+......+.+..-.++ . +..|..|.-++=||
T Consensus 48 GR~l~~~~~~~Sl~at~~sa~t~lG~~g~~y~~G~~~~~~~~~~-~~~~~~~~~~~~p~~~r-~--~~~T~~e~l~~Rfg 123 (593)
T 2xq2_A 48 GKSLPWWAVGASLIAANISAEQFIGMSGSGYSIGLAIASYEWMS-AITLIIVGKYFLPIFIE-K--GIYTIPEFVEKRFN 123 (593)
T ss_dssp ---CCHHHHHHHHHGGGSSHHHHHHHHHHHHHTCGGGGHHHHHH-HHHHHHHHHTHHHHHHH-T--TCCSHHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHHHhcHHHHhhHhHHHHHcCHHHHHHHHHH-HHHHHHHHHHHHHHHHh-C--CCCCcHHHHHHHcc
Confidence 366778888888876666554 4688888778886422111110 00000111111111121 1 25799999999999
Q ss_pred ccchhHHHHHHHHHHHHHhHHHHHHhhhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHHHHhhhcCCCcchhhHhHHHH
Q 009772 180 ERLGVWLALFPTVYLSAGTATTLILLGGETMKMFFQIVCGPLCSSNPLTTVEWYLVFTSLCIVLSQLPNLNSIAGLSLIG 259 (526)
Q Consensus 180 ~~~g~~~~~~~i~~~~~g~~v~yii~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ii~~~v~~~L~~l~~l~~l~~~S~~~ 259 (526)
++.+.+...+.++...+.....-+...+..++. ..+ .+...-.++.+++++..+.+--++...+.-.+=
T Consensus 124 ~~~~~~~ai~~l~~~~~~~~~~~l~~~~~~l~~----~~G-------i~~~~~i~i~~~i~~~Yt~~GGl~av~~TD~iQ 192 (593)
T 2xq2_A 124 KKLKTILAVFWISLYIFVNLTSVLYLGGLALET----ILG-------IPLMYSILGLALFALVYSIYGGLSAVVWTDVIQ 192 (593)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHH----HHC-------CCHHHHHHHHHHHHHHHHHTTC---CCHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----hcC-------ccHHHHHHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 875444432222211111111112223333333 232 222333344555556677788888877766555
Q ss_pred HHH
Q 009772 260 AIT 262 (526)
Q Consensus 260 ~~~ 262 (526)
.+.
T Consensus 193 ~ii 195 (593)
T 2xq2_A 193 VFF 195 (593)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 7
>2a65_A Leutaa, Na(+):neurotransmitter symporter (SNF family); membrane protein, transport protein; HET: BOG; 1.65A {Aquifex aeolicus} SCOP: f.54.1.1 PDB: 2q6h_A* 2q72_A* 2qb4_A* 2qei_A* 3f3a_A* 3f3c_A* 3f3d_A* 3f3e_A* 3f48_A* 3f4i_A* 3f4j_A* 3usg_A* 3usi_A 3usj_A 3usk_A 3usl_A* 3usm_A* 3uso_A 3usp_A* 3qs5_A* ...
Probab=94.14 E-value=6.6 Score=41.18 Aligned_cols=216 Identities=13% Similarity=0.086 Sum_probs=99.6
Q ss_pred CChhHHHHHHHhhhhhhh-hchhHHHHHHhch----HHHHHHHHHHHHHHHHHHHHHHHchh-hcCCccccCHHHHHHHH
Q 009772 104 GNAHYAAFHNLNAGVGFQ-ALLLPVAFAFLGW----SWGILSLTIAYCWQLYTLWILVQLHE-AVPGKRYNRYVELAQAA 177 (526)
Q Consensus 104 ~s~~~a~~~l~~~~iG~G-iL~LP~af~~~G~----~~giill~~~~~~~~~t~~lL~~~~~-~~~g~r~~sY~~l~~~~ 177 (526)
+|..+-++..+.+.+|-| +.=.||-..+-|- +.=+++++++++=-++.=..+.|-.. +..+.....|.+++.
T Consensus 9 ~sr~~FiLa~~G~AVGLGNiWRFPyl~~~nGGgAFlipYli~l~~~GiPll~~E~alGq~~~~~~r~~~i~a~~~l~~-- 86 (519)
T 2a65_A 9 ATRLGLILAMAGNAVGLGNFLRFPVQAAENGGGAFMIPYIIAFLLVGIPLMWIEWAMGRYGGAQGHGTTPAIFYLLWR-- 86 (519)
T ss_dssp SCHHHHHHHHHHHHSSHHHHTHHHHHHHHTTTHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTTCCSHHHHHHHHSC--
T ss_pred CcHHHHHHHHHHHHhcccHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHhcccchhccCCCHHHHHHHhcC--
Confidence 556778888889999999 6779998877763 23333333333333333333344111 110101224444432
Q ss_pred hcccchhHHHHHHHHHHHHHhHHHHHHhhhhhHHHHHHHHhCCC------CC----------------------CCCCCc
Q 009772 178 FGERLGVWLALFPTVYLSAGTATTLILLGGETMKMFFQIVCGPL------CS----------------------SNPLTT 229 (526)
Q Consensus 178 ~G~~~g~~~~~~~i~~~~~g~~v~yii~~~~~l~~~~~~~~~~~------~~----------------------~~~~~~ 229 (526)
++..+.+....++ .++..++-|.++.+-.+..++..+.++. |. ..+...
T Consensus 87 --~~~~~giG~~~v~-~~~~i~~yY~vi~gW~l~Y~~~s~~~~lp~~w~~~~~~~~~~~~~~~~f~~~l~~~~~~~~~g~ 163 (519)
T 2a65_A 87 --NRFAKILGVFGLW-IPLVVAIYYVYIESWTLGFAIKFLVGLVPEPPPNATDPDSILRPFKEFLYSYIGVPKGDEPILK 163 (519)
T ss_dssp --SHHHHHHHTHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCC--CCHHHHHHHHHHHHHHHHTCCSSSSCBCC
T ss_pred --CcCCchhhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcccccccccccCCcccccCcHHHHHHHHHCCCCCcccccC
Confidence 1112222222222 2255566677776666666555544320 00 000001
Q ss_pred chhhHH-HHH---HHHhhhcCCCc-chhhHhHHHHHHHHHHHHHhhhhhhccc-C----CCCCCCCCCCCCCCCcchHHH
Q 009772 230 VEWYLV-FTS---LCIVLSQLPNL-NSIAGLSLIGAITAVTYSTMVWVLSVSQ-P----RPPNISYEPLSSASPAATVFS 299 (526)
Q Consensus 230 ~~~~ii-~~~---v~~~L~~l~~l-~~l~~~S~~~~~~~~~~~~ii~~~~i~~-~----~~~~~~~~~~~~~~~~~~~~~ 299 (526)
..|-.+ +.. ++..++..|.+ |.+.+++.+-...-++..++.++.++.- | ..++.++--.++.+...+..-
T Consensus 164 ~~~~~~~~~~~~w~i~~~ii~~Gv~kgiek~~~~~mp~l~vlliiL~ir~ltLpGp~~~A~~Gl~~~~~Pd~s~L~~~~v 243 (519)
T 2a65_A 164 PSLFAYIVFLITMFINVSILIRGISKGIERFAKIAMPTLFILAVFLVIRVFLLETPNGTAADGLNFLWTPDFEKLKDPGV 243 (519)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTCTTTTHHHHHHHHHHHHHHHHHHHHHHHTTCEETTEEHHHHHHHHHSCCTTSTTCHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHhcCCHHHhCCHHH
Confidence 113221 111 12234566777 5577776666554444333333444332 2 111111100011111223345
Q ss_pred HHHHHHHHHHhhccccchHHHHhhC
Q 009772 300 VMNALGIIAFAFRGHNLAMEIQATM 324 (526)
Q Consensus 300 ~~~a~gii~faf~~h~~i~~I~~~m 324 (526)
+..|++-+.|+...-.-..-.+.+-
T Consensus 244 w~~A~gQ~FFSLslG~G~~ity~SY 268 (519)
T 2a65_A 244 WIAAVGQIFFTLSLGFGAIITYASY 268 (519)
T ss_dssp HHHHHHHHHHHHTTTSSHHHHHHTT
T ss_pred HHHHHHHHHHHhHHHHhHHhhhhcc
Confidence 6889999999998554444445544
No 8
>2wsw_A BCCT family betaine/carnitine/choline transporter; transport protein, SD methionine, membrane protein; HET: CM5 1PE; 2.29A {Proteus mirabilis} PDB: 2wsx_A* 3hfx_A*
Probab=43.77 E-value=2.4e+02 Score=29.16 Aligned_cols=90 Identities=16% Similarity=0.062 Sum_probs=50.4
Q ss_pred cCHHHHH-HHHhcccchhHHHHHHHHHHHHHhHHHHHHhhhhhHHHHHHHHhCCCCCCCCCCcchhhHHHHHH--HHhhh
Q 009772 168 NRYVELA-QAAFGERLGVWLALFPTVYLSAGTATTLILLGGETMKMFFQIVCGPLCSSNPLTTVEWYLVFTSL--CIVLS 244 (526)
Q Consensus 168 ~sY~~l~-~~~~G~~~g~~~~~~~i~~~~~g~~v~yii~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ii~~~v--~~~L~ 244 (526)
.=|+-++ ++..|+ .|+.++.+.++.+.+|..++.=. ....+..-++.+.+- +.+...++++..++ +..++
T Consensus 179 ~l~PllG~~r~~G~-~G~~IDilav~at~~G~atsLGl-g~~qi~~Gl~~lfGi-----~~~~~~qi~ii~vit~~~~~S 251 (509)
T 2wsw_A 179 TLVPLVGEKHVNGL-FGTVVDNFYLVALILAMGTSLGL-ATPLVTECIQYLFGI-----PHTLQLDAIIISCWILLNAIC 251 (509)
T ss_dssp GCHHHHHHHHHHSH-HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCC-----CCCHHHHHHHHHHHHHHHHHH
T ss_pred HhHhhcCCcccCCc-hhhhhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHcCC-----CCccHHHHHHHHHHHHHHHHH
Confidence 3477788 788887 79999888888888888777433 333333333444431 12223333332222 23355
Q ss_pred cCCCc-chhhHhHHHHHHHHH
Q 009772 245 QLPNL-NSIAGLSLIGAITAV 264 (526)
Q Consensus 245 ~l~~l-~~l~~~S~~~~~~~~ 264 (526)
-...+ |-++++|-+.+...+
T Consensus 252 a~sGl~kGIk~LS~~N~~la~ 272 (509)
T 2wsw_A 252 VAFGLQKGVKIASDVRTYLSF 272 (509)
T ss_dssp HHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHHH
Confidence 55555 456666655544433
No 9
>3gia_A Uncharacterized protein MJ0609; membrane protein, transporter, cell membrane, membrane, transmembrane, transport protein; HET: D10 BCN; 2.32A {Methanocaldococcus jannaschii} PDB: 3gi9_C* 3gi8_C
Probab=23.86 E-value=3.7e+02 Score=26.42 Aligned_cols=47 Identities=15% Similarity=0.171 Sum_probs=33.1
Q ss_pred CHHHHHHHHhcccchhHHHHHHHHHHHHHhHHHHHHhhhhhHHHHHHH
Q 009772 169 RYVELAQAAFGERLGVWLALFPTVYLSAGTATTLILLGGETMKMFFQI 216 (526)
Q Consensus 169 sY~~l~~~~~G~~~g~~~~~~~i~~~~~g~~v~yii~~~~~l~~~~~~ 216 (526)
...++.+..+|+ ++..+..+......+++..+.+...+..+..+-.+
T Consensus 259 ~~~~~~~~~~g~-~~~~~i~~~~~~~~~~~~~~~~~~~sR~l~a~a~d 305 (444)
T 3gia_A 259 ALAVAAKPFLGN-LGFLLISIGALFSISSAMNATIYGGANVAYSLAKD 305 (444)
T ss_dssp HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHH
T ss_pred hHHHHHHHHhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 567888888887 45555555555566888888888777777766554
No 10
>4ain_A Glycine betaine transporter BETP; membrane protein, chemosensor and osmosensor, secondary TRAN sodium coupled transport; HET: FLC CM5; 3.10A {Corynebacterium glutamicum} PDB: 4doj_A* 2w8a_A 2wit_A 3p03_A
Probab=20.53 E-value=1.5e+02 Score=30.85 Aligned_cols=48 Identities=19% Similarity=0.089 Sum_probs=32.3
Q ss_pred CHHHHHHH-HhcccchhHHHHHHHHHHHHHhHHHHHHhhhhhHHHHHHHHh
Q 009772 169 RYVELAQA-AFGERLGVWLALFPTVYLSAGTATTLILLGGETMKMFFQIVC 218 (526)
Q Consensus 169 sY~~l~~~-~~G~~~g~~~~~~~i~~~~~g~~v~yii~~~~~l~~~~~~~~ 218 (526)
=|+=++++ ..|+ +|+.++.+.++.+.+|..++.=.- ...+..-++.+.
T Consensus 181 l~PllG~r~~~G~-~G~~IDilav~atv~GvatSLGlg-~~Qi~~Gl~~lf 229 (539)
T 4ain_A 181 FVPLIGEKGAEGW-LGKLIDILAIIATVFGTACSLGLG-ALQIGAGLSAAN 229 (539)
T ss_dssp GHHHHHHHHTTSH-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHC
T ss_pred hHhhcCCCccCCc-chhhhHHHHHHHHHHHHhhhHHHH-HHHHHHHHHHhc
Confidence 37777877 6777 699998888888888888775433 333333334443
Done!