Query 009774
Match_columns 526
No_of_seqs 359 out of 3235
Neff 8.2
Searched_HMMs 46136
Date Thu Mar 28 17:10:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009774.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009774hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK06833 L-fuculose phosphate 100.0 2.1E-44 4.5E-49 344.9 20.0 201 27-257 3-205 (214)
2 PRK08087 L-fuculose phosphate 100.0 4.5E-44 9.7E-49 342.6 20.3 202 25-257 1-204 (215)
3 PRK05874 L-fuculose-phosphate 100.0 1.3E-43 2.8E-48 338.6 21.3 199 27-254 4-205 (217)
4 PRK13213 araD L-ribulose-5-pho 100.0 3.7E-43 8.1E-48 336.5 21.2 204 27-256 2-219 (231)
5 PRK12348 sgaE L-ribulose-5-pho 100.0 6E-43 1.3E-47 337.1 21.3 203 28-256 2-215 (228)
6 PRK08193 araD L-ribulose-5-pho 100.0 6.9E-43 1.5E-47 337.6 21.4 204 27-255 2-217 (231)
7 PRK07490 hypothetical protein; 100.0 4.1E-43 8.8E-48 341.9 19.5 210 22-257 3-216 (245)
8 TIGR00760 araD L-ribulose-5-ph 100.0 9.6E-43 2.1E-47 336.3 21.2 205 27-257 2-220 (231)
9 cd00398 Aldolase_II Class II A 100.0 6.6E-43 1.4E-47 334.1 19.2 201 29-257 2-206 (209)
10 PRK05834 hypothetical protein; 100.0 1.4E-42 3E-47 325.5 20.7 186 27-242 3-192 (194)
11 PRK12347 sgbE L-ribulose-5-pho 100.0 2E-42 4.3E-47 333.5 21.7 203 27-255 2-218 (231)
12 PRK06755 hypothetical protein; 100.0 4.4E-42 9.5E-47 324.6 23.1 201 27-244 4-205 (209)
13 PRK06557 L-ribulose-5-phosphat 100.0 1.8E-42 3.9E-47 333.6 20.8 204 27-257 8-213 (221)
14 PRK06486 hypothetical protein; 100.0 1.2E-42 2.5E-47 341.1 19.5 219 12-257 9-232 (262)
15 PRK08130 putative aldolase; Va 100.0 1.4E-42 3E-47 332.3 19.5 202 25-257 1-207 (213)
16 PRK06754 mtnB methylthioribulo 100.0 4.3E-42 9.2E-47 327.1 21.9 204 26-244 3-206 (208)
17 PRK13145 araD L-ribulose-5-pho 100.0 3.3E-42 7.3E-47 332.6 21.2 205 26-255 2-218 (234)
18 TIGR01086 fucA L-fuculose phos 100.0 3.2E-42 7E-47 329.8 20.2 198 27-255 2-201 (214)
19 PRK06661 hypothetical protein; 100.0 1.2E-41 2.7E-46 328.3 19.4 200 29-255 2-206 (231)
20 PRK09220 methylthioribulose-1- 100.0 3.4E-41 7.4E-46 319.9 21.9 201 25-242 1-203 (204)
21 PRK06357 hypothetical protein; 100.0 3.7E-41 8.1E-46 321.4 21.6 194 27-244 3-205 (216)
22 PRK07044 aldolase II superfami 100.0 2.1E-41 4.7E-46 331.4 20.2 208 24-257 11-221 (252)
23 PRK06208 hypothetical protein; 100.0 1.7E-41 3.6E-46 333.2 19.4 206 26-259 39-248 (274)
24 PRK07090 class II aldolase/add 100.0 2.7E-41 5.9E-46 331.0 20.3 206 25-257 26-232 (260)
25 TIGR03328 salvage_mtnB methylt 100.0 6.2E-41 1.3E-45 315.8 20.9 190 34-239 1-192 (193)
26 PRK08333 L-fuculose phosphate 100.0 7E-41 1.5E-45 313.4 21.2 179 28-238 2-183 (184)
27 PRK08660 L-fuculose phosphate 100.0 3.2E-40 6.8E-45 308.2 21.1 180 30-241 1-180 (181)
28 COG0235 AraD Ribulose-5-phosph 100.0 1.7E-40 3.6E-45 318.4 16.8 198 24-249 2-203 (219)
29 PRK03634 rhamnulose-1-phosphat 100.0 4.2E-40 9.2E-45 324.7 18.6 215 24-257 3-261 (274)
30 TIGR02624 rhamnu_1P_ald rhamnu 100.0 5.1E-40 1.1E-44 322.4 18.9 212 27-257 6-259 (270)
31 PF00596 Aldolase_II: Class II 100.0 9.3E-39 2E-43 299.9 19.4 178 32-235 1-184 (184)
32 TIGR01691 enolase-ppase 2,3-di 100.0 8.4E-33 1.8E-37 264.7 22.8 218 284-526 1-220 (220)
33 KOG2631 Class II aldolase/addu 100.0 1.7E-32 3.8E-37 246.4 20.9 210 21-243 11-226 (238)
34 COG4229 Predicted enolase-phos 100.0 9.5E-28 2.1E-32 212.4 17.3 222 283-524 3-224 (229)
35 PRK08324 short chain dehydroge 100.0 2.4E-28 5.1E-33 272.7 14.1 198 28-253 14-238 (681)
36 PLN02770 haloacid dehalogenase 100.0 3.9E-27 8.4E-32 231.6 19.7 122 400-525 106-230 (248)
37 TIGR02632 RhaD_aldol-ADH rhamn 100.0 1.1E-27 2.3E-32 266.3 16.4 184 31-242 2-212 (676)
38 COG0546 Gph Predicted phosphat 99.9 2.7E-26 5.9E-31 221.5 19.1 123 400-526 87-213 (220)
39 TIGR02253 CTE7 HAD superfamily 99.9 1.6E-25 3.4E-30 216.2 21.8 123 400-526 92-220 (221)
40 PRK13226 phosphoglycolate phos 99.9 7.1E-26 1.5E-30 220.0 19.4 123 400-526 93-220 (229)
41 PRK13288 pyrophosphatase PpaX; 99.9 4.6E-26 1E-30 219.0 16.9 123 400-526 80-206 (214)
42 PLN03243 haloacid dehalogenase 99.9 1.7E-25 3.6E-30 220.7 18.2 122 400-526 107-230 (260)
43 PRK10826 2-deoxyglucose-6-phos 99.9 1.7E-25 3.6E-30 216.4 17.8 123 400-526 90-215 (222)
44 PRK11587 putative phosphatase; 99.9 1.9E-25 4.1E-30 215.5 17.5 121 400-526 81-203 (218)
45 TIGR01422 phosphonatase phosph 99.9 1.7E-25 3.6E-30 220.8 17.1 104 400-507 97-204 (253)
46 TIGR01428 HAD_type_II 2-haloal 99.9 7.6E-25 1.6E-29 207.9 19.8 106 400-509 90-197 (198)
47 TIGR01449 PGP_bact 2-phosphogl 99.9 4E-25 8.6E-30 212.1 17.6 123 400-526 83-209 (213)
48 PLN02575 haloacid dehalogenase 99.9 4.1E-25 8.9E-30 225.6 18.4 122 400-526 214-337 (381)
49 PRK13478 phosphonoacetaldehyde 99.9 8.3E-25 1.8E-29 217.5 19.0 106 400-508 99-207 (267)
50 TIGR03351 PhnX-like phosphonat 99.9 9.2E-25 2E-29 210.8 17.3 124 400-526 85-215 (220)
51 PRK09449 dUMP phosphatase; Pro 99.9 4.6E-24 1E-28 206.5 21.8 122 401-526 94-218 (224)
52 TIGR01454 AHBA_synth_RP 3-amin 99.9 1.1E-24 2.3E-29 208.1 16.6 123 400-526 73-199 (205)
53 PRK13223 phosphoglycolate phos 99.9 2.7E-24 5.9E-29 214.0 18.7 123 400-526 99-225 (272)
54 PRK14988 GMP/IMP nucleotidase; 99.9 2.3E-24 5.1E-29 208.5 16.4 103 400-506 91-196 (224)
55 COG0637 Predicted phosphatase/ 99.9 2.2E-24 4.8E-29 208.0 15.3 105 398-506 82-188 (221)
56 TIGR02254 YjjG/YfnB HAD superf 99.9 2.2E-23 4.7E-28 201.4 21.3 122 400-526 95-220 (224)
57 PLN02940 riboflavin kinase 99.9 5E-24 1.1E-28 221.4 17.7 123 400-526 91-216 (382)
58 PRK10748 flavin mononucleotide 99.9 9E-24 1.9E-28 206.5 18.5 117 400-526 111-234 (238)
59 PRK13222 phosphoglycolate phos 99.9 1.2E-23 2.6E-28 203.6 18.4 123 400-526 91-217 (226)
60 PRK13225 phosphoglycolate phos 99.9 6.8E-24 1.5E-28 210.6 15.8 122 400-526 140-263 (273)
61 PRK10563 6-phosphogluconate ph 99.9 7.7E-24 1.7E-28 204.6 14.2 119 400-525 86-207 (221)
62 PLN02779 haloacid dehalogenase 99.9 9.8E-23 2.1E-27 204.1 18.5 124 401-526 143-268 (286)
63 COG1011 Predicted hydrolase (H 99.9 1.2E-22 2.7E-27 196.8 18.3 122 400-526 97-222 (229)
64 TIGR02252 DREG-2 REG-2-like, H 99.9 2.5E-22 5.4E-27 191.3 20.0 98 400-502 103-203 (203)
65 KOG2630 Enolase-phosphatase E- 99.9 2.9E-22 6.4E-27 184.5 18.5 242 281-526 5-248 (254)
66 TIGR01990 bPGM beta-phosphoglu 99.9 8.1E-23 1.8E-27 191.5 14.8 97 401-503 86-184 (185)
67 TIGR02009 PGMB-YQAB-SF beta-ph 99.9 1.6E-22 3.6E-27 189.4 15.2 98 400-503 86-185 (185)
68 PRK06698 bifunctional 5'-methy 99.9 2.6E-22 5.5E-27 214.5 18.2 121 400-526 328-449 (459)
69 PF13419 HAD_2: Haloacid dehal 99.9 9E-22 2E-26 181.5 18.0 100 400-503 75-176 (176)
70 PRK10725 fructose-1-P/6-phosph 99.9 7.5E-22 1.6E-26 185.6 17.0 99 400-504 86-186 (188)
71 TIGR01993 Pyr-5-nucltdase pyri 99.9 4.8E-22 1E-26 186.5 14.8 97 400-503 82-184 (184)
72 TIGR02247 HAD-1A3-hyp Epoxide 99.9 7.5E-22 1.6E-26 189.3 13.2 103 400-506 92-198 (211)
73 PLN02919 haloacid dehalogenase 99.9 3.9E-21 8.4E-26 222.0 19.9 121 402-526 161-285 (1057)
74 TIGR01509 HAD-SF-IA-v3 haloaci 99.9 5E-21 1.1E-25 178.7 16.6 98 401-503 84-183 (183)
75 PRK09456 ?-D-glucose-1-phospha 99.9 7.8E-21 1.7E-25 180.6 17.7 102 402-506 84-187 (199)
76 TIGR01548 HAD-SF-IA-hyp1 haloa 99.9 1.5E-20 3.3E-25 178.3 18.7 90 402-496 106-197 (197)
77 TIGR00213 GmhB_yaeD D,D-heptos 99.8 1.1E-20 2.5E-25 175.9 13.9 119 402-526 26-174 (176)
78 PLN02811 hydrolase 99.8 4.5E-20 9.8E-25 178.2 15.1 123 400-526 76-206 (220)
79 PHA02597 30.2 hypothetical pro 99.8 6.5E-20 1.4E-24 173.9 15.0 116 401-526 73-194 (197)
80 PRK08942 D,D-heptose 1,7-bisph 99.8 7.1E-20 1.5E-24 171.4 13.4 119 402-526 29-172 (181)
81 PRK06769 hypothetical protein; 99.8 9E-20 1.9E-24 169.2 11.6 121 402-526 28-167 (173)
82 TIGR01493 HAD-SF-IA-v2 Haloaci 99.8 1.4E-19 3E-24 168.2 10.8 86 400-496 88-175 (175)
83 TIGR01656 Histidinol-ppas hist 99.8 1.6E-19 3.4E-24 163.2 10.9 101 402-506 27-147 (147)
84 TIGR01549 HAD-SF-IA-v1 haloaci 99.8 7.7E-19 1.7E-23 159.7 15.3 91 400-497 62-154 (154)
85 KOG3085 Predicted hydrolase (H 99.8 8.2E-19 1.8E-23 167.1 15.1 103 401-508 112-217 (237)
86 KOG2914 Predicted haloacid-hal 99.8 2.6E-18 5.7E-23 163.1 16.8 124 399-525 89-217 (222)
87 TIGR01662 HAD-SF-IIIA HAD-supe 99.8 1.2E-18 2.6E-23 154.4 12.6 97 402-505 25-132 (132)
88 TIGR00338 serB phosphoserine p 99.8 4.9E-18 1.1E-22 163.7 16.7 97 401-501 84-192 (219)
89 COG3347 Uncharacterized conser 99.8 3.6E-18 7.8E-23 168.4 13.3 185 33-238 19-221 (404)
90 PLN02954 phosphoserine phospha 99.8 1.2E-17 2.7E-22 161.5 15.8 120 401-526 83-219 (224)
91 TIGR01261 hisB_Nterm histidino 99.8 6.5E-18 1.4E-22 154.5 13.0 99 402-506 29-149 (161)
92 TIGR01685 MDP-1 magnesium-depe 99.8 2.2E-18 4.7E-23 158.7 8.9 104 400-507 43-160 (174)
93 TIGR01491 HAD-SF-IB-PSPlk HAD- 99.7 1.8E-17 3.8E-22 157.3 14.8 100 401-504 79-190 (201)
94 TIGR01664 DNA-3'-Pase DNA 3'-p 99.7 2.6E-17 5.6E-22 151.4 11.0 94 403-502 43-160 (166)
95 TIGR01672 AphA HAD superfamily 99.7 2.4E-16 5.2E-21 152.4 16.4 95 401-506 113-213 (237)
96 TIGR01668 YqeG_hyp_ppase HAD s 99.7 4.6E-16 9.9E-21 144.0 13.1 95 402-507 43-139 (170)
97 KOG3109 Haloacid dehalogenase- 99.7 3.4E-15 7.4E-20 137.3 17.1 185 282-506 13-207 (244)
98 PRK09552 mtnX 2-hydroxy-3-keto 99.7 2.6E-15 5.6E-20 144.9 15.8 99 400-501 72-184 (219)
99 PRK11133 serB phosphoserine ph 99.6 1.2E-15 2.7E-20 154.4 13.6 115 400-522 179-305 (322)
100 PRK13582 thrH phosphoserine ph 99.6 2E-15 4.3E-20 143.9 12.6 119 400-526 66-191 (205)
101 TIGR01452 PGP_euk phosphoglyco 99.6 1E-15 2.2E-20 153.2 9.2 119 403-526 144-279 (279)
102 TIGR01489 DKMTPPase-SF 2,3-dik 99.6 7.5E-15 1.6E-19 137.6 13.7 92 401-499 71-184 (188)
103 cd01427 HAD_like Haloacid deha 99.6 9.6E-15 2.1E-19 128.4 11.6 98 402-503 24-139 (139)
104 TIGR01458 HAD-SF-IIA-hyp3 HAD- 99.6 1.5E-15 3.4E-20 149.9 6.6 120 403-526 121-250 (257)
105 PRK11009 aphA acid phosphatase 99.6 3E-14 6.6E-19 137.7 14.6 96 400-506 112-213 (237)
106 TIGR01681 HAD-SF-IIIC HAD-supe 99.6 1.3E-14 2.8E-19 127.8 9.6 87 403-495 30-126 (128)
107 TIGR03333 salvage_mtnX 2-hydro 99.5 9.6E-14 2.1E-18 133.4 14.0 94 401-498 69-177 (214)
108 TIGR02726 phenyl_P_delta pheny 99.5 1.7E-14 3.8E-19 132.5 7.7 85 409-504 41-125 (169)
109 TIGR01670 YrbI-phosphatas 3-de 99.5 1.5E-14 3.2E-19 131.7 6.5 85 410-506 36-120 (154)
110 PF00702 Hydrolase: haloacid d 99.5 2.3E-13 5E-18 130.1 14.9 89 401-497 126-215 (215)
111 COG2179 Predicted hydrolase of 99.5 8.6E-14 1.9E-18 123.3 9.6 90 405-505 49-139 (175)
112 PRK05446 imidazole glycerol-ph 99.5 3E-13 6.5E-18 137.9 13.1 100 401-506 29-150 (354)
113 KOG3699 Cytoskeletal protein A 99.5 1.8E-13 4E-18 142.3 9.8 157 77-253 87-247 (598)
114 TIGR01490 HAD-SF-IB-hyp1 HAD-s 99.5 1.3E-12 2.8E-17 124.2 14.6 97 402-502 87-196 (202)
115 TIGR01488 HAD-SF-IB Haloacid D 99.4 1.8E-12 3.9E-17 120.4 15.1 92 401-496 72-177 (177)
116 PRK10444 UMP phosphatase; Prov 99.4 2.9E-13 6.3E-18 132.7 8.0 71 455-526 170-245 (248)
117 PHA02530 pseT polynucleotide k 99.4 5.8E-13 1.2E-17 134.7 10.0 102 402-506 187-298 (300)
118 PRK09484 3-deoxy-D-manno-octul 99.4 3.6E-13 7.8E-18 126.1 7.0 82 409-501 55-136 (183)
119 TIGR01457 HAD-SF-IIA-hyp2 HAD- 99.4 8.5E-13 1.8E-17 129.8 9.1 121 403-526 122-249 (249)
120 TIGR01686 FkbH FkbH-like domai 99.4 3.1E-12 6.8E-17 130.5 11.1 90 403-499 32-125 (320)
121 TIGR01663 PNK-3'Pase polynucle 99.3 3.4E-12 7.3E-17 136.4 10.6 90 403-498 198-305 (526)
122 smart00577 CPDc catalytic doma 99.3 1.3E-12 2.9E-17 118.0 6.3 93 401-501 44-139 (148)
123 TIGR02137 HSK-PSP phosphoserin 99.3 2.6E-11 5.7E-16 115.3 15.0 98 401-506 67-173 (203)
124 PLN02645 phosphoglycolate phos 99.3 1.9E-12 4.1E-17 131.5 7.3 115 408-526 176-303 (311)
125 COG0647 NagD Predicted sugar p 99.3 3.8E-12 8.1E-17 124.7 8.0 69 457-526 188-261 (269)
126 COG0560 SerB Phosphoserine pho 99.3 1.3E-10 2.7E-15 111.2 15.0 98 401-502 76-185 (212)
127 COG0241 HisB Histidinol phosph 99.3 5E-11 1.1E-15 109.5 11.7 99 402-506 31-151 (181)
128 PF13242 Hydrolase_like: HAD-h 99.2 9.9E-12 2.1E-16 98.7 5.5 69 457-526 2-75 (75)
129 PTZ00445 p36-lilke protein; Pr 99.2 4.2E-11 9.1E-16 111.3 9.5 100 403-506 76-207 (219)
130 TIGR01544 HAD-SF-IE haloacid d 99.2 3.9E-10 8.6E-15 110.9 15.1 93 400-496 119-230 (277)
131 PF12689 Acid_PPase: Acid Phos 99.2 8.9E-11 1.9E-15 107.3 9.4 100 400-506 43-153 (169)
132 PRK08238 hypothetical protein; 99.1 5.1E-10 1.1E-14 119.3 14.7 94 402-506 72-167 (479)
133 TIGR01459 HAD-SF-IIA-hyp4 HAD- 99.1 5.4E-11 1.2E-15 116.6 4.4 97 404-504 140-241 (242)
134 TIGR01459 HAD-SF-IIA-hyp4 HAD- 99.0 6.6E-10 1.4E-14 108.9 7.9 89 403-498 25-116 (242)
135 TIGR02244 HAD-IG-Ncltidse HAD 99.0 7.5E-09 1.6E-13 105.1 15.0 104 402-506 184-325 (343)
136 PF06888 Put_Phosphatase: Puta 99.0 4.3E-09 9.4E-14 101.3 12.2 103 400-506 69-198 (234)
137 PF08645 PNK3P: Polynucleotide 99.0 1.3E-09 2.8E-14 99.5 8.0 93 403-501 30-153 (159)
138 TIGR01460 HAD-SF-IIA Haloacid 99.0 2.5E-09 5.3E-14 104.4 9.9 50 456-506 185-236 (236)
139 PF09419 PGP_phosphatase: Mito 98.9 4.3E-09 9.3E-14 95.9 9.9 90 405-506 62-166 (168)
140 PRK11590 hypothetical protein; 98.9 1.1E-07 2.4E-12 91.1 18.2 95 401-501 94-200 (211)
141 TIGR01533 lipo_e_P4 5'-nucleot 98.9 2.4E-08 5.3E-13 98.2 12.8 83 401-493 117-204 (266)
142 KOG3040 Predicted sugar phosph 98.9 1.9E-09 4.1E-14 98.7 4.1 68 456-524 178-250 (262)
143 PRK10530 pyridoxal phosphate ( 98.8 1.1E-08 2.4E-13 101.8 7.4 113 403-522 138-257 (272)
144 PF12710 HAD: haloacid dehalog 98.8 2E-07 4.3E-12 87.4 14.9 85 405-494 92-192 (192)
145 COG1778 Low specificity phosph 98.7 8.4E-09 1.8E-13 90.7 4.3 83 409-502 42-124 (170)
146 TIGR01684 viral_ppase viral ph 98.7 4.8E-08 1E-12 96.0 8.2 56 405-463 149-206 (301)
147 TIGR01545 YfhB_g-proteo haloac 98.7 2.7E-06 5.8E-11 81.4 19.5 96 401-501 93-199 (210)
148 KOG1615 Phosphoserine phosphat 98.6 1.1E-06 2.3E-11 80.2 14.4 88 400-495 86-191 (227)
149 TIGR02251 HIF-SF_euk Dullard-l 98.6 2.3E-08 5.1E-13 91.6 3.2 96 401-504 41-139 (162)
150 TIGR01512 ATPase-IB2_Cd heavy 98.6 8.5E-08 1.8E-12 104.7 7.5 110 400-525 360-473 (536)
151 TIGR01525 ATPase-IB_hvy heavy 98.5 1.6E-07 3.5E-12 103.1 8.6 106 400-521 382-488 (556)
152 COG4996 Predicted phosphatase 98.5 3.3E-07 7.1E-12 78.0 6.8 79 401-488 40-127 (164)
153 KOG3120 Predicted haloacid deh 98.5 1.3E-06 2.8E-11 81.2 10.9 103 400-506 82-211 (256)
154 PHA03398 viral phosphatase sup 98.4 7.5E-07 1.6E-11 87.7 9.2 80 405-487 151-262 (303)
155 PRK01158 phosphoglycolate phos 98.4 1.4E-06 3E-11 84.5 10.2 79 420-502 117-198 (230)
156 PRK00192 mannosyl-3-phosphogly 98.4 1E-05 2.2E-10 80.8 15.9 88 411-506 141-236 (273)
157 TIGR01511 ATPase-IB1_Cu copper 98.3 1E-06 2.3E-11 96.6 7.6 105 400-521 403-507 (562)
158 PF06941 NT5C: 5' nucleotidase 98.3 8.5E-07 1.8E-11 83.6 5.2 102 400-525 71-180 (191)
159 TIGR01482 SPP-subfamily Sucros 98.3 8.8E-06 1.9E-10 78.5 12.1 79 420-502 109-190 (225)
160 COG4359 Uncharacterized conser 98.2 1.1E-05 2.3E-10 73.1 10.9 91 401-498 72-180 (220)
161 TIGR01456 CECR5 HAD-superfamil 98.2 1.9E-06 4.2E-11 88.0 6.0 71 456-526 230-316 (321)
162 PF13344 Hydrolase_6: Haloacid 98.2 3.8E-06 8.3E-11 70.6 6.3 83 403-498 15-100 (101)
163 KOG2882 p-Nitrophenyl phosphat 98.1 1.4E-06 3E-11 85.2 3.2 101 404-508 167-273 (306)
164 PRK10671 copA copper exporting 98.1 3.7E-06 8E-11 96.7 6.9 86 400-498 648-733 (834)
165 TIGR01487 SPP-like sucrose-pho 98.0 2.4E-05 5.2E-10 75.1 10.0 80 420-503 109-189 (215)
166 PF03767 Acid_phosphat_B: HAD 97.9 7.9E-06 1.7E-10 79.2 4.4 97 402-504 115-222 (229)
167 TIGR01675 plant-AP plant acid 97.9 5.3E-05 1.2E-09 72.8 9.0 95 401-504 119-222 (229)
168 TIGR01522 ATPase-IIA2_Ca golgi 97.9 2.4E-05 5.3E-10 90.4 7.4 116 402-524 528-664 (884)
169 TIGR01680 Veg_Stor_Prot vegeta 97.8 0.00011 2.3E-09 71.9 10.0 102 401-506 144-251 (275)
170 KOG3699 Cytoskeletal protein A 97.8 1.6E-05 3.4E-10 83.9 4.4 175 43-243 363-540 (598)
171 smart00775 LNS2 LNS2 domain. T 97.8 0.00015 3.3E-09 66.0 9.9 94 403-499 28-141 (157)
172 PF05761 5_nucleotid: 5' nucle 97.8 8.1E-05 1.7E-09 78.7 8.8 105 401-506 182-326 (448)
173 TIGR01485 SPP_plant-cyano sucr 97.7 0.00021 4.7E-09 70.2 10.5 53 453-506 160-212 (249)
174 COG3700 AphA Acid phosphatase 97.6 0.00014 3.1E-09 65.5 6.7 92 404-506 116-213 (237)
175 PLN02645 phosphoglycolate phos 97.5 0.00051 1.1E-08 69.9 10.4 90 402-502 44-136 (311)
176 PRK11033 zntA zinc/cadmium/mer 97.5 0.00017 3.7E-09 81.8 7.2 83 401-498 567-649 (741)
177 TIGR02250 FCP1_euk FCP1-like p 97.5 0.00022 4.8E-09 64.8 6.5 78 400-488 56-138 (156)
178 TIGR00099 Cof-subfamily Cof su 97.3 0.0012 2.6E-08 65.1 9.5 46 456-502 184-229 (256)
179 COG4087 Soluble P-type ATPase 97.2 0.00085 1.8E-08 57.6 6.3 111 402-524 30-140 (152)
180 PF11019 DUF2608: Protein of u 97.2 0.0083 1.8E-07 59.0 13.7 102 403-507 82-212 (252)
181 TIGR01116 ATPase-IIA1_Ca sarco 97.1 0.00071 1.5E-08 78.7 6.8 114 402-522 537-672 (917)
182 PRK15126 thiamin pyrimidine py 97.1 0.00082 1.8E-08 66.9 6.2 35 467-502 195-229 (272)
183 COG0561 Cof Predicted hydrolas 97.1 0.00086 1.9E-08 66.4 6.2 41 463-504 192-232 (264)
184 PRK10513 sugar phosphate phosp 97.1 0.0012 2.6E-08 65.5 7.1 17 282-298 1-17 (270)
185 PRK10976 putative hydrolase; P 97.0 0.0013 2.8E-08 65.2 6.2 36 466-502 196-231 (266)
186 COG2503 Predicted secreted aci 96.9 0.0035 7.5E-08 59.7 8.1 85 401-490 121-206 (274)
187 TIGR01456 CECR5 HAD-superfamil 96.9 0.0029 6.2E-08 64.7 8.3 85 403-502 17-109 (321)
188 PRK12702 mannosyl-3-phosphogly 96.9 0.0017 3.8E-08 64.3 6.1 37 407-446 23-59 (302)
189 PRK03669 mannosyl-3-phosphogly 96.8 0.0029 6.4E-08 62.9 6.7 38 465-503 192-232 (271)
190 PF05152 DUF705: Protein of un 96.8 0.0076 1.7E-07 58.9 9.1 80 405-487 145-256 (297)
191 TIGR02461 osmo_MPG_phos mannos 96.7 0.003 6.4E-08 61.2 6.1 34 406-439 19-52 (225)
192 PTZ00174 phosphomannomutase; P 96.7 0.0032 7E-08 61.8 6.4 19 281-299 2-20 (247)
193 COG5663 Uncharacterized conser 96.6 0.02 4.3E-07 51.5 10.0 91 403-508 73-165 (194)
194 TIGR02463 MPGP_rel mannosyl-3- 96.4 0.014 3.1E-07 55.9 8.7 77 418-501 138-219 (221)
195 TIGR01689 EcbF-BcbF capsule bi 96.3 0.0055 1.2E-07 53.4 4.4 29 403-431 25-53 (126)
196 TIGR02463 MPGP_rel mannosyl-3- 96.3 0.0075 1.6E-07 57.9 5.8 36 407-445 21-56 (221)
197 KOG2470 Similar to IMP-GMP spe 96.2 0.007 1.5E-07 60.3 5.3 101 404-505 242-376 (510)
198 TIGR01497 kdpB K+-transporting 96.2 0.013 2.9E-07 65.2 7.8 88 402-502 446-533 (675)
199 PLN02887 hydrolase family prot 96.1 0.01 2.2E-07 65.2 6.2 35 467-502 514-548 (580)
200 PF08282 Hydrolase_3: haloacid 96.0 0.011 2.4E-07 57.1 5.7 37 464-501 190-226 (254)
201 PLN02177 glycerol-3-phosphate 95.9 0.37 8.1E-06 52.1 17.3 88 403-499 111-210 (497)
202 COG2217 ZntA Cation transport 95.9 0.019 4.2E-07 64.2 7.6 84 402-498 537-620 (713)
203 PRK14010 potassium-transportin 95.9 0.023 5E-07 63.4 8.1 85 402-499 441-525 (673)
204 TIGR01486 HAD-SF-IIB-MPGP mann 95.7 0.021 4.5E-07 56.3 6.1 39 465-504 181-221 (256)
205 PRK01122 potassium-transportin 95.7 0.028 6.1E-07 62.8 7.7 87 402-501 445-531 (679)
206 PLN02423 phosphomannomutase 95.5 0.085 1.8E-06 51.7 9.7 31 475-506 199-233 (245)
207 KOG2134 Polynucleotide kinase 95.5 0.054 1.2E-06 55.1 8.1 95 402-501 104-230 (422)
208 PRK14502 bifunctional mannosyl 95.3 0.032 7E-07 61.5 6.4 31 409-439 440-470 (694)
209 TIGR01452 PGP_euk phosphoglyco 95.2 0.14 2.9E-06 51.3 10.2 88 402-501 18-108 (279)
210 PF03031 NIF: NLI interacting 95.0 0.014 3E-07 53.0 2.3 82 401-490 35-119 (159)
211 TIGR00685 T6PP trehalose-phosp 95.0 0.027 5.9E-07 55.1 4.5 59 462-525 169-234 (244)
212 TIGR01647 ATPase-IIIA_H plasma 95.0 0.036 7.8E-07 63.3 6.1 95 402-500 442-557 (755)
213 PF05116 S6PP: Sucrose-6F-phos 95.0 0.031 6.7E-07 54.9 4.8 44 461-506 166-209 (247)
214 PF08235 LNS2: LNS2 (Lipin/Ned 94.9 0.2 4.3E-06 45.3 9.1 102 403-505 28-149 (157)
215 TIGR01484 HAD-SF-IIB HAD-super 94.8 0.047 1E-06 51.6 5.3 44 457-501 160-203 (204)
216 TIGR01484 HAD-SF-IIB HAD-super 94.5 0.057 1.2E-06 51.0 5.2 12 287-298 2-13 (204)
217 PRK10517 magnesium-transportin 94.4 0.059 1.3E-06 62.7 5.9 93 402-500 550-660 (902)
218 KOG2961 Predicted hydrolase (H 94.4 0.33 7.2E-06 43.1 9.0 96 402-506 61-169 (190)
219 COG3769 Predicted hydrolase (H 94.4 0.26 5.6E-06 46.6 8.8 94 405-504 137-235 (274)
220 TIGR01524 ATPase-IIIB_Mg magne 94.3 0.069 1.5E-06 62.0 6.2 94 402-501 515-626 (867)
221 COG5610 Predicted hydrolase (H 94.2 0.13 2.8E-06 53.4 7.0 98 402-503 97-201 (635)
222 PRK15122 magnesium-transportin 93.9 0.081 1.8E-06 61.6 5.8 92 402-499 550-659 (903)
223 TIGR02471 sucr_syn_bact_C sucr 93.9 0.066 1.4E-06 52.0 4.3 48 453-501 152-199 (236)
224 TIGR01517 ATPase-IIB_Ca plasma 93.8 0.11 2.3E-06 61.1 6.5 95 402-500 579-691 (941)
225 KOG0207 Cation transport ATPas 93.7 0.18 4E-06 56.6 7.7 83 402-498 723-806 (951)
226 TIGR01523 ATPase-IID_K-Na pota 93.6 0.15 3.2E-06 60.4 7.2 96 402-501 646-769 (1053)
227 PRK10187 trehalose-6-phosphate 93.6 0.14 3.1E-06 50.8 6.0 39 465-504 179-220 (266)
228 TIGR01494 ATPase_P-type ATPase 92.9 0.41 8.9E-06 52.0 8.9 82 402-499 347-428 (499)
229 TIGR01106 ATPase-IIC_X-K sodiu 92.0 0.2 4.4E-06 59.0 5.4 96 402-501 568-707 (997)
230 COG3882 FkbH Predicted enzyme 91.5 0.52 1.1E-05 49.6 7.0 85 405-498 258-348 (574)
231 TIGR02471 sucr_syn_bact_C sucr 90.0 0.43 9.4E-06 46.2 4.8 25 415-439 27-51 (236)
232 PLN03017 trehalose-phosphatase 89.5 0.59 1.3E-05 48.3 5.4 18 479-496 304-321 (366)
233 COG0474 MgtA Cation transport 89.5 1.3 2.8E-05 51.8 8.9 100 401-504 546-665 (917)
234 TIGR01457 HAD-SF-IIA-hyp2 HAD- 89.0 0.73 1.6E-05 45.2 5.6 102 402-506 17-145 (249)
235 TIGR01460 HAD-SF-IIA Haloacid 89.0 1.2 2.6E-05 43.2 7.1 85 402-499 14-102 (236)
236 COG4030 Uncharacterized protei 88.5 24 0.00052 33.8 16.0 38 401-439 82-119 (315)
237 PRK10513 sugar phosphate phosp 88.4 0.72 1.6E-05 45.5 5.1 44 458-502 194-237 (270)
238 TIGR01458 HAD-SF-IIA-hyp3 HAD- 88.2 0.52 1.1E-05 46.5 3.9 48 402-452 21-71 (257)
239 TIGR01658 EYA-cons_domain eyes 88.2 1.7 3.7E-05 41.9 7.1 83 418-506 175-259 (274)
240 PLN02580 trehalose-phosphatase 88.2 0.8 1.7E-05 47.7 5.4 35 403-438 142-176 (384)
241 PRK10976 putative hydrolase; P 87.9 0.54 1.2E-05 46.4 3.9 15 284-298 2-16 (266)
242 PF05822 UMPH-1: Pyrimidine 5' 87.6 2.9 6.4E-05 40.7 8.5 92 400-496 88-198 (246)
243 PLN02151 trehalose-phosphatase 87.6 0.91 2E-05 46.7 5.3 14 285-298 99-112 (354)
244 KOG2469 IMP-GMP specific 5'-nu 87.5 0.85 1.8E-05 47.0 4.9 102 404-506 200-335 (424)
245 PLN02499 glycerol-3-phosphate 87.3 3 6.4E-05 44.7 9.0 28 410-438 101-128 (498)
246 TIGR01486 HAD-SF-IIB-MPGP mann 87.1 1.7 3.7E-05 42.7 6.8 13 287-299 2-14 (256)
247 TIGR01657 P-ATPase-V P-type AT 87.0 3.2 6.8E-05 49.5 10.2 41 402-445 656-696 (1054)
248 PRK10444 UMP phosphatase; Prov 86.7 0.56 1.2E-05 46.0 3.2 105 402-506 17-144 (248)
249 KOG1618 Predicted phosphatase 86.5 1.9 4E-05 43.2 6.5 86 403-502 52-144 (389)
250 PRK14501 putative bifunctional 86.4 1.1 2.5E-05 51.0 5.9 24 474-498 669-692 (726)
251 KOG0202 Ca2+ transporting ATPa 85.2 2.7 5.8E-05 47.3 7.6 95 402-500 584-700 (972)
252 TIGR02461 osmo_MPG_phos mannos 85.0 1 2.2E-05 43.4 4.0 43 456-501 179-223 (225)
253 COG1877 OtsB Trehalose-6-phosp 84.9 1.8 3.9E-05 42.8 5.6 17 283-299 17-33 (266)
254 PLN02205 alpha,alpha-trehalose 84.7 1.5 3.2E-05 50.8 5.7 27 470-497 775-801 (854)
255 PF08282 Hydrolase_3: haloacid 84.5 1.4 2.9E-05 42.3 4.7 13 287-299 1-13 (254)
256 KOG2882 p-Nitrophenyl phosphat 84.3 2.9 6.2E-05 41.7 6.7 93 402-505 38-133 (306)
257 PRK15126 thiamin pyrimidine py 83.8 1.2 2.6E-05 44.1 4.0 17 283-299 1-17 (272)
258 PRK00192 mannosyl-3-phosphogly 83.5 1.5 3.3E-05 43.5 4.6 43 403-448 22-64 (273)
259 TIGR02245 HAD_IIID1 HAD-superf 83.5 4.9 0.00011 37.9 7.7 87 403-498 46-150 (195)
260 KOG3189 Phosphomannomutase [Li 83.4 2.9 6.4E-05 39.0 5.9 89 279-473 6-97 (252)
261 PLN02887 hydrolase family prot 83.4 3.5 7.6E-05 45.6 7.7 32 282-316 306-337 (580)
262 PRK03669 mannosyl-3-phosphogly 82.4 2.9 6.3E-05 41.4 6.1 20 280-299 3-22 (271)
263 PF06189 5-nucleotidase: 5'-nu 81.8 7.1 0.00015 38.2 8.2 76 417-506 185-260 (264)
264 KOG3128 Uncharacterized conser 81.0 3.2 6.9E-05 40.3 5.4 93 401-496 137-247 (298)
265 COG4850 Uncharacterized conser 80.7 8.3 0.00018 38.8 8.3 87 402-493 196-294 (373)
266 COG0561 Cof Predicted hydrolas 78.0 2 4.3E-05 42.3 3.3 18 282-299 1-18 (264)
267 TIGR01652 ATPase-Plipid phosph 77.3 3.9 8.5E-05 48.8 6.0 38 402-439 631-668 (1057)
268 PLN02382 probable sucrose-phos 77.0 4.1 8.8E-05 43.2 5.4 45 461-506 176-223 (413)
269 PF03031 NIF: NLI interacting 76.8 1.2 2.6E-05 40.2 1.2 16 285-300 1-16 (159)
270 COG2216 KdpB High-affinity K+ 74.9 7.6 0.00016 41.6 6.5 83 403-498 448-530 (681)
271 PLN03190 aminophospholipid tra 72.3 4.2 9.1E-05 48.8 4.5 37 402-438 726-762 (1178)
272 cd04728 ThiG Thiazole synthase 72.3 54 0.0012 31.9 11.2 95 402-506 104-206 (248)
273 PRK10187 trehalose-6-phosphate 72.0 9 0.00019 37.9 6.2 14 285-298 15-28 (266)
274 KOG4549 Magnesium-dependent ph 71.8 16 0.00036 31.6 6.7 82 402-487 44-132 (144)
275 TIGR01487 SPP-like sucrose-pho 69.3 6.1 0.00013 37.5 4.1 37 403-439 19-55 (215)
276 TIGR00099 Cof-subfamily Cof su 68.1 7.9 0.00017 37.8 4.8 40 403-445 17-56 (256)
277 PRK11840 bifunctional sulfur c 68.1 49 0.0011 33.7 10.3 94 402-506 178-280 (326)
278 PRK00208 thiG thiazole synthas 67.5 63 0.0014 31.5 10.5 94 402-506 104-206 (250)
279 KOG3040 Predicted sugar phosph 66.8 15 0.00033 34.8 5.9 50 403-452 24-73 (262)
280 PLN03063 alpha,alpha-trehalose 66.4 10 0.00022 43.7 5.9 15 284-298 507-521 (797)
281 PLN03064 alpha,alpha-trehalose 66.3 10 0.00023 44.1 5.9 38 402-439 622-660 (934)
282 PRK01158 phosphoglycolate phos 65.9 8.4 0.00018 36.8 4.4 41 403-446 21-61 (230)
283 TIGR00685 T6PP trehalose-phosp 64.8 3.4 7.4E-05 40.3 1.4 15 285-299 4-18 (244)
284 TIGR01482 SPP-subfamily Sucros 63.1 10 0.00022 35.9 4.4 37 403-439 16-52 (225)
285 PRK10530 pyridoxal phosphate ( 61.1 13 0.00027 36.5 4.8 40 403-445 21-60 (272)
286 PRK14502 bifunctional mannosyl 60.9 60 0.0013 36.5 10.2 44 458-502 611-656 (694)
287 CHL00162 thiG thiamin biosynth 60.1 1.2E+02 0.0025 29.9 10.8 92 402-506 118-220 (267)
288 COG0731 Fe-S oxidoreductases [ 59.9 13 0.00028 37.3 4.5 66 401-475 91-167 (296)
289 KOG0323 TFIIF-interacting CTD 59.9 15 0.00032 40.8 5.3 50 400-452 199-248 (635)
290 KOG1618 Predicted phosphatase 59.4 7.2 0.00016 39.2 2.6 51 456-506 268-342 (389)
291 PF05690 ThiG: Thiazole biosyn 58.2 1.2E+02 0.0027 29.4 10.5 92 402-506 104-206 (247)
292 COG0541 Ffh Signal recognition 57.4 42 0.00091 35.5 7.8 100 402-505 138-248 (451)
293 PRK08324 short chain dehydroge 56.5 21 0.00045 40.5 6.1 52 198-249 345-396 (681)
294 PF14226 DIOX_N: non-haem diox 54.3 8 0.00017 32.6 1.8 35 174-211 1-38 (116)
295 PF13580 SIS_2: SIS domain; PD 52.8 1.6E+02 0.0034 25.7 10.5 98 406-504 23-137 (138)
296 PF06506 PrpR_N: Propionate ca 49.7 14 0.0003 34.1 2.7 87 406-506 65-152 (176)
297 KOG3107 Predicted haloacid deh 49.6 71 0.0015 33.1 7.7 82 418-506 370-453 (468)
298 TIGR02244 HAD-IG-Ncltidse HAD 48.5 18 0.0004 37.2 3.6 21 279-299 7-27 (343)
299 TIGR02632 RhaD_aldol-ADH rhamn 47.9 32 0.00069 39.0 5.7 53 198-250 337-389 (676)
300 TIGR02329 propionate_PrpR prop 47.5 64 0.0014 35.4 7.8 87 406-506 85-172 (526)
301 KOG0780 Signal recognition par 47.3 1.3E+02 0.0027 31.6 9.1 99 402-504 139-248 (483)
302 TIGR02251 HIF-SF_euk Dullard-l 47.1 11 0.00023 34.4 1.5 15 285-299 2-16 (162)
303 KOG0204 Calcium transporting A 46.9 76 0.0017 36.4 8.1 94 402-499 647-760 (1034)
304 KOG0209 P-type ATPase [Inorgan 46.9 44 0.00096 38.1 6.3 41 399-439 672-712 (1160)
305 TIGR02245 HAD_IIID1 HAD-superf 46.4 11 0.00023 35.6 1.4 18 282-299 19-36 (195)
306 smart00577 CPDc catalytic doma 45.5 11 0.00025 33.5 1.4 15 285-299 3-17 (148)
307 COG2022 ThiG Uncharacterized e 45.5 2.1E+02 0.0046 27.7 9.7 94 402-506 111-213 (262)
308 COG4502 5'(3')-deoxyribonucleo 45.4 47 0.001 29.4 5.0 37 401-438 67-105 (180)
309 PRK15424 propionate catabolism 43.7 78 0.0017 34.8 7.7 86 406-505 95-181 (538)
310 COG1015 DeoB Phosphopentomutas 43.1 1.2E+02 0.0027 31.3 8.3 86 403-489 222-337 (397)
311 PLN02334 ribulose-phosphate 3- 42.3 2.8E+02 0.006 26.5 10.6 98 405-506 102-204 (229)
312 COG3769 Predicted hydrolase (H 41.8 38 0.00082 32.4 4.2 33 407-439 28-60 (274)
313 PF03332 PMM: Eukaryotic phosp 41.5 31 0.00067 33.0 3.7 74 4-91 101-182 (220)
314 PRK00994 F420-dependent methyl 38.6 3.2E+02 0.0068 26.6 9.8 89 411-506 23-118 (277)
315 KOG0207 Cation transport ATPas 38.1 60 0.0013 37.4 5.8 46 456-504 722-768 (951)
316 COG5083 SMP2 Uncharacterized p 37.2 27 0.0006 36.6 2.8 17 283-299 374-390 (580)
317 PF03332 PMM: Eukaryotic phosp 37.0 59 0.0013 31.2 4.8 42 407-452 1-42 (220)
318 PF03681 UPF0150: Uncharacteri 35.8 39 0.00085 23.6 2.7 24 202-225 15-39 (48)
319 COG3347 Uncharacterized conser 34.1 77 0.0017 32.8 5.3 53 199-251 337-389 (404)
320 cd00733 GlyRS_alpha_core Class 33.0 39 0.00085 32.8 2.9 43 458-500 80-128 (279)
321 PF02358 Trehalose_PPase: Treh 32.9 20 0.00043 34.6 1.0 10 288-297 1-10 (235)
322 PHA02530 pseT polynucleotide k 32.9 2.8E+02 0.006 27.5 9.4 16 284-299 158-173 (300)
323 PRK13762 tRNA-modifying enzyme 32.5 48 0.001 33.9 3.7 29 402-430 142-170 (322)
324 PRK13125 trpA tryptophan synth 32.3 3.9E+02 0.0084 25.9 10.0 94 405-505 116-215 (244)
325 TIGR01425 SRP54_euk signal rec 31.3 4.3E+02 0.0092 28.2 10.6 97 405-505 141-248 (429)
326 TIGR02250 FCP1_euk FCP1-like p 31.3 27 0.00059 31.5 1.5 17 284-300 6-22 (156)
327 PF06189 5-nucleotidase: 5'-nu 31.1 3.7E+02 0.0079 26.6 9.2 76 418-506 36-111 (264)
328 PRK09348 glyQ glycyl-tRNA synt 31.0 43 0.00094 32.6 2.8 43 458-500 84-132 (283)
329 TIGR00388 glyQ glycyl-tRNA syn 29.7 48 0.001 32.5 2.9 43 458-500 81-129 (293)
330 TIGR00262 trpA tryptophan synt 29.5 5.5E+02 0.012 25.2 10.9 93 403-505 125-228 (256)
331 TIGR01858 tag_bisphos_ald clas 29.4 2.3E+02 0.0049 28.4 7.8 93 407-506 4-104 (282)
332 PRK13717 conjugal transfer pro 28.5 88 0.0019 27.1 4.0 16 280-295 41-56 (128)
333 COG1598 Predicted nuclease of 28.5 85 0.0018 24.3 3.7 29 208-239 24-52 (73)
334 TIGR03365 Bsubt_queE 7-cyano-7 28.5 46 0.001 32.3 2.7 29 403-431 85-113 (238)
335 TIGR01485 SPP_plant-cyano sucr 27.9 62 0.0013 31.3 3.5 35 405-439 24-58 (249)
336 PF05761 5_nucleotid: 5' nucle 27.9 51 0.0011 35.3 3.0 20 280-299 8-27 (448)
337 PRK12738 kbaY tagatose-bisphos 27.7 2.3E+02 0.0051 28.4 7.5 93 407-506 6-106 (286)
338 PF04123 DUF373: Domain of unk 27.3 1.2E+02 0.0027 31.2 5.6 73 407-505 53-129 (344)
339 PRK06552 keto-hydroxyglutarate 26.8 5.6E+02 0.012 24.4 9.9 85 409-502 5-93 (213)
340 COG0241 HisB Histidinol phosph 26.7 38 0.00082 31.5 1.6 17 283-299 4-20 (181)
341 TIGR02495 NrdG2 anaerobic ribo 26.5 90 0.002 28.7 4.2 28 403-430 75-102 (191)
342 cd05008 SIS_GlmS_GlmD_1 SIS (S 26.5 52 0.0011 27.9 2.4 30 404-433 59-88 (126)
343 PLN03176 flavanone-3-hydroxyla 26.4 87 0.0019 26.9 3.8 36 173-211 37-78 (120)
344 cd00956 Transaldolase_FSA Tran 26.3 3.9E+02 0.0085 25.4 8.6 99 400-505 83-186 (211)
345 TIGR00236 wecB UDP-N-acetylglu 26.1 2.8E+02 0.006 28.3 8.2 97 407-506 16-119 (365)
346 PLN02997 flavonol synthase 25.6 78 0.0017 32.3 3.9 35 173-210 32-67 (325)
347 PRK12737 gatY tagatose-bisphos 25.5 4.8E+02 0.01 26.1 9.3 94 406-506 5-106 (284)
348 PLN02591 tryptophan synthase 25.3 6.2E+02 0.013 24.8 9.9 96 403-505 116-219 (250)
349 COG0191 Fba Fructose/tagatose 25.0 5.9E+02 0.013 25.5 9.6 94 406-506 5-107 (286)
350 PF03808 Glyco_tran_WecB: Glyc 24.8 3.6E+02 0.0079 24.5 7.8 84 405-494 35-120 (172)
351 PLN02704 flavonol synthase 24.6 1E+02 0.0022 31.6 4.5 36 173-211 42-78 (335)
352 PF04413 Glycos_transf_N: 3-De 24.5 91 0.002 29.0 3.8 75 409-491 109-185 (186)
353 TIGR01101 V_ATP_synt_F vacuola 24.5 2E+02 0.0043 24.6 5.5 63 405-472 46-112 (115)
354 cd00947 TBP_aldolase_IIB Tagat 24.5 2.7E+02 0.006 27.7 7.3 92 408-506 2-101 (276)
355 PRK10076 pyruvate formate lyas 24.3 1.2E+02 0.0026 29.0 4.6 34 404-437 52-88 (213)
356 TIGR01657 P-ATPase-V P-type AT 24.1 1.7E+02 0.0037 35.2 6.8 87 405-498 601-695 (1054)
357 PRK08185 hypothetical protein; 23.9 4.1E+02 0.0089 26.6 8.5 92 408-506 2-100 (283)
358 cd05014 SIS_Kpsf KpsF-like pro 23.8 69 0.0015 27.2 2.7 29 404-432 60-88 (128)
359 PLN02382 probable sucrose-phos 23.8 48 0.001 35.1 2.0 15 284-298 9-23 (413)
360 PF00532 Peripla_BP_1: Peripla 23.4 2.9E+02 0.0064 27.1 7.5 59 409-474 22-80 (279)
361 TIGR00190 thiC thiamine biosyn 23.1 1.2E+02 0.0027 31.7 4.6 90 400-509 156-267 (423)
362 smart00540 LEM in nuclear memb 22.9 79 0.0017 22.1 2.2 31 409-439 10-40 (44)
363 PRK07998 gatY putative fructos 22.6 6.7E+02 0.015 25.1 9.7 94 406-506 5-106 (283)
364 PRK14501 putative bifunctional 22.4 97 0.0021 35.5 4.2 16 283-298 491-506 (726)
365 PRK07709 fructose-bisphosphate 22.3 7.6E+02 0.016 24.7 10.0 96 406-506 5-109 (285)
366 PRK09195 gatY tagatose-bisphos 22.1 5.7E+02 0.012 25.6 9.1 93 407-506 6-106 (284)
367 PRK00043 thiE thiamine-phospha 21.9 6.3E+02 0.014 23.3 9.2 87 408-506 94-190 (212)
368 PLN02639 oxidoreductase, 2OG-F 21.5 98 0.0021 31.8 3.7 35 173-210 37-72 (337)
369 TIGR02826 RNR_activ_nrdG3 anae 21.1 1.2E+02 0.0026 27.1 3.7 25 405-429 75-99 (147)
370 TIGR02668 moaA_archaeal probab 21.1 2.5E+02 0.0054 28.0 6.5 27 403-429 69-96 (302)
371 KOG0206 P-type ATPase [General 20.8 2.5E+02 0.0055 33.8 7.1 38 402-439 651-688 (1151)
372 cd05710 SIS_1 A subgroup of th 20.6 78 0.0017 26.9 2.3 28 404-431 60-87 (120)
373 cd05007 SIS_Etherase N-acetylm 20.4 8.1E+02 0.018 23.9 11.3 97 408-506 40-154 (257)
374 PLN02580 trehalose-phosphatase 20.4 1.6E+02 0.0034 31.0 4.9 34 461-495 302-338 (384)
375 PRK13352 thiamine biosynthesis 20.2 1.5E+02 0.0033 31.1 4.6 52 400-451 159-211 (431)
376 KOG2469 IMP-GMP specific 5'-nu 20.0 66 0.0014 33.6 2.0 18 282-299 25-42 (424)
No 1
>PRK06833 L-fuculose phosphate aldolase; Provisional
Probab=100.00 E-value=2.1e-44 Score=344.89 Aligned_cols=201 Identities=22% Similarity=0.321 Sum_probs=175.3
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCCCCCCCC
Q 009774 27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYP 106 (526)
Q Consensus 27 ~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~~~~p~~ 106 (526)
.+++|++|+++||+++++||+.+++||||+|++++ +.|||||||.++++|+++||++||+||++++|. .+|
T Consensus 3 ~~~~r~~i~~~~~~l~~~gl~~g~~GniS~r~~~~------~~~~ItpsG~~~~~l~~~div~vd~~g~~i~g~-~~p-- 73 (214)
T PRK06833 3 LQKEREEIVAYGKKLISSGLTKGTGGNISIFNREQ------GLMAITPSGIDYFEIKPEDIVIMDLDGKVVEGE-RKP-- 73 (214)
T ss_pred hHHHHHHHHHHHHHHHHcCCCCCCCceEEEEeCCC------CEEEEcCCCCChhhCCHHHEEEEcCCCCCcCCC-CCC--
Confidence 45689999999999999999999999999999763 489999999999999999999999999999986 355
Q ss_pred CCCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCcccCccceeeecCC-CCch
Q 009774 107 HKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AYEN 184 (526)
Q Consensus 107 ~~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~-~~~~ 184 (526)
|+|+.+|+.||++| |++||+|+||+|+++||+++. ++|...+... .+++ .||+.+|. +++.
T Consensus 74 ------s~E~~lH~~iy~~rpdv~aVvH~H~~~a~a~s~~~~---~lp~~~~~~~-~~~~-------~i~~~~y~~~gs~ 136 (214)
T PRK06833 74 ------SSELDMHLIFYRNREDINAIVHTHSPYATTLACLGW---ELPAVHYLIA-VAGP-------NVRCAEYATFGTK 136 (214)
T ss_pred ------CccHHHHHHHHHhCCCCCEEEEeCcHHHHHHHHcCC---CCCcchhHHH-HHCC-------CeeeccCCCCChH
Confidence 99999999999999 999999999999999999875 3444333332 1222 39999885 6899
Q ss_pred HHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCccccccc
Q 009774 185 ELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKL 257 (526)
Q Consensus 185 ~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~~ 257 (526)
++++.++++|++ .++|||+|||+++||+|+++|+.+++.+|++|++++.++++|.+..+ +++++++++.
T Consensus 137 ~la~~v~~~l~~---~~~vll~nHGv~~~G~~~~eA~~~~e~lE~~a~~~~~a~~~G~~~~l-~~~~~~~~~~ 205 (214)
T PRK06833 137 ELAENAFEAMED---RRAVLLANHGLLAGANNLKNAFNIAEEIEFCAEIYYQTKSIGEPKLL-PEDEMENMAE 205 (214)
T ss_pred HHHHHHHHHhCc---CCEEEECCCCCEEEeCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC-CHHHHHHHHH
Confidence 999999999986 49999999999999999999999999999999999999999988665 5547776654
No 2
>PRK08087 L-fuculose phosphate aldolase; Provisional
Probab=100.00 E-value=4.5e-44 Score=342.63 Aligned_cols=202 Identities=22% Similarity=0.310 Sum_probs=176.0
Q ss_pred ccHHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCCCCCC
Q 009774 25 RAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKP 104 (526)
Q Consensus 25 ~~~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~~~~p 104 (526)
|..+++|++|+++||+++++||+.+++||||+|+++ .|||||||.++++|+++||++||++|++++|. +|
T Consensus 1 ~~~~~~~~~l~~~~r~l~~~Gl~~~~~GNiS~R~~~--------~~lItpsG~~~~~l~~~di~~vd~~G~~~~g~--~p 70 (215)
T PRK08087 1 MERNKLARQIIDTCLEMTRLGLNQGTAGNVSVRYQD--------GMLITPTGIPYEKLTESHIVFVDGNGKHEEGK--LP 70 (215)
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEcCC--------CEEEeCCCCChhhCCHHHEEEECCCCCCCCCC--CC
Confidence 457789999999999999999999999999999976 69999999999999999999999999999874 55
Q ss_pred CCCCCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCcccCccceeeecCC-CC
Q 009774 105 YPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AY 182 (526)
Q Consensus 105 ~~~~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~-~~ 182 (526)
|+|+.||+.||+.| |++||+|+||+|++++|+.+. ++|...... ..+++ ..||+++|. ++
T Consensus 71 --------s~E~~lH~~iy~~rpdv~aViH~H~~~~~a~s~~~~---~ip~~~~~~-~~~~~------~~v~~~~y~~~g 132 (215)
T PRK08087 71 --------SSEWRFHMAAYQTRPDANAVVHNHAVHCTAVSILNR---PIPAIHYMI-AAAGG------NSIPCAPYATFG 132 (215)
T ss_pred --------ChhHHHHHHHHHhCCCCCEEEecCcHHHHHHHHcCC---CCCcHHHHH-HHHcC------CCceeecCCCCC
Confidence 99999999999999 999999999999999999875 344333222 22211 139999985 68
Q ss_pred chHHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCccccccc
Q 009774 183 ENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKL 257 (526)
Q Consensus 183 ~~~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~~ 257 (526)
+.++++.+++.|++ .+++||+|||+++||+|+++|+.+++.+|++|++++.++++|++....+++++++++.
T Consensus 133 s~~la~~~~~~l~~---~~~vLl~nHGv~~~G~~~~~A~~~~e~lE~~a~~~~~a~~~g~~~~~l~~e~~~~~~~ 204 (215)
T PRK08087 133 TRELSEHVALALKN---RKATLLQHHGLIACEVNLEKALWLAHEVEVLAQLYLKTLAITDPVPVLSDEEIAVVLE 204 (215)
T ss_pred CHHHHHHHHHHhCc---CCEEEecCCCCEEEcCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence 99999999999986 4899999999999999999999999999999999999999998765566668877754
No 3
>PRK05874 L-fuculose-phosphate aldolase; Validated
Probab=100.00 E-value=1.3e-43 Score=338.56 Aligned_cols=199 Identities=22% Similarity=0.287 Sum_probs=171.6
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCC-CCCCC
Q 009774 27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSP-SPKPY 105 (526)
Q Consensus 27 ~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~-~~~p~ 105 (526)
....|++|+++|++++++||+.+++||||+|++++ .|||||||.++++|+++||++||++|+++++. +.+|
T Consensus 4 ~~~~r~~i~~~~~~l~~~Gl~~g~~GNiS~R~~~~-------~~lITPsg~~~~~l~~~Div~vd~~G~~i~~~~~~kP- 75 (217)
T PRK05874 4 VDDPESAVLAAAKDMLRRGLVEGTAGNISARRSDG-------NVVITPSSVDYAEMLLHDLVLVDAGGAVLHAKDGRSP- 75 (217)
T ss_pred hHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCC-------CEEEeCCCCChhhCCHHHEEEEcCCCCEecCCCCCCC-
Confidence 45679999999999999999999999999999874 79999999999999999999999999999753 2344
Q ss_pred CCCCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCcccCccceeeecCC-CCc
Q 009774 106 PHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AYE 183 (526)
Q Consensus 106 ~~~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~-~~~ 183 (526)
|+|+.||+.|||.| |++||+|+||+|+++||+.+. ++|....+....++| .+|+.+|. |++
T Consensus 76 -------ssE~~~H~~iY~~rpdv~aViHtH~~~a~a~s~~~~---~l~~~~~~~~~~~~~-------~v~~~~y~~~gs 138 (217)
T PRK05874 76 -------STELNLHLACYRAFDDIGSVIHSHPVWATMFAVAHE---PIPACIDEFAIYCGG-------DVRCTEYAASGT 138 (217)
T ss_pred -------chhHHHHHHHHHhCCCCCEEEECCcHHHHHHHHcCC---CCCcchhHHHHHcCC-------ceeeecCCCCCc
Confidence 99999999999999 999999999999999999875 344222222222223 39999995 689
Q ss_pred hHHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcccc
Q 009774 184 NELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRN 254 (526)
Q Consensus 184 ~~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~ 254 (526)
.+++++++++|++ .++|||+|||+++||+|+++|+.+++.+|++|++++.++++|++.+++++ ..++
T Consensus 139 ~ela~~v~~~l~~---~~~vlL~nHGv~~~G~~l~~A~~~~e~lE~~a~~~~~a~~~G~~~~l~~e-~~~~ 205 (217)
T PRK05874 139 PEVGRNAVRALEG---RAAALIANHGLVAVGPRPDQVLRVTALVERTAQIVWGARALGGPVPIPED-VCRN 205 (217)
T ss_pred HHHHHHHHHHhCc---CCEEEEcCCCCeEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCHH-HHHH
Confidence 9999999999986 49999999999999999999999999999999999999999988766554 4443
No 4
>PRK13213 araD L-ribulose-5-phosphate 4-epimerase; Reviewed
Probab=100.00 E-value=3.7e-43 Score=336.48 Aligned_cols=204 Identities=19% Similarity=0.227 Sum_probs=170.6
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCC-CCcccCCCCCCC
Q 009774 27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGN-GTTLSSPSPKPY 105 (526)
Q Consensus 27 ~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~d-g~~~~g~~~~p~ 105 (526)
++++|++|+++||+|+++||+.+++||||+|++++ +.|+|||||.++++|+++||++||++ |++++|. .+|
T Consensus 2 ~~~~r~evv~~~~~l~~~gl~~gt~GNiS~r~~~~------~~~~ITpsg~~~~~l~~~div~vd~~~g~~~~g~-~kP- 73 (231)
T PRK13213 2 LEQLKQQVFEANLALPKYKLVTFTWGNVSGIDREH------GLVVIKPSGVEYDVMSVNDMVVVDLATGKVVEGD-KKP- 73 (231)
T ss_pred hHHHHHHHHHHHHHHHHCCCCCCCcceEEEEECCC------CEEEEECCCCCcccCCHHHEEEEEcCCCCCcCCC-CCc-
Confidence 45789999999999999999999999999998653 48999999999999999999999995 9999986 356
Q ss_pred CCCCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCcccCccceeeecCCC---
Q 009774 106 PHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTA--- 181 (526)
Q Consensus 106 ~~~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~~--- 181 (526)
|+|+.||+.||+.| |++||||+||+|+++|++.+.+ +|.........++| .||+++|.+
T Consensus 74 -------SsE~~lH~~iY~~rpdv~AViHtHs~~at~~a~~~~~---lp~~~~~~~~~~~g-------~Ip~~~~~~~~~ 136 (231)
T PRK13213 74 -------SSDTDTHLVLYRAFAEIGGIVHTHSRHATIWAQAGKS---LSALGTTHADYFYG-------PIPCTRLMTEAE 136 (231)
T ss_pred -------CccHHHHHHHHHhCCCCCEEEEcCCHHHHHHHHcCCC---CCCcchHHHHHhCC-------Ccceeecccccc
Confidence 99999999999999 9999999999999999999753 33222212222333 399998853
Q ss_pred --Cc--hHHHHHHHHHHhhC----CCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhC-CCCCCCCCCCcc
Q 009774 182 --YE--NELTDSLAKAIDAY----PKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQL-GLDWSTPNHGPT 252 (526)
Q Consensus 182 --~~--~~la~~i~~~l~~~----~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~-g~~~~~~~~~~~ 252 (526)
++ .++++.+++.+++. ++.++|||+|||+++||+|+++||.+++.+|++|++++.++++ |++.+++++ ++
T Consensus 137 ~~g~~~~~~~~~~a~~~~~~~~~~~~~~avlL~nHG~v~~G~~l~eA~~~~e~lE~~A~i~~~a~~l~g~~~~l~~~-~~ 215 (231)
T PRK13213 137 ITGDYEHETGKVIVETFAEQGLRAADIPAVLVNGHGPFAWGSNAANAVHNAVVLEEIAYMNLFTHQLTPGVGDMQQT-LL 215 (231)
T ss_pred cCCccccchHHHHHHHHHhhcccccCCCEEEECCCCcEEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHH-HH
Confidence 44 38899999988642 3458999999999999999999999999999999999999999 776666655 55
Q ss_pred cccc
Q 009774 253 RNFK 256 (526)
Q Consensus 253 ~~~~ 256 (526)
+++.
T Consensus 216 ~~~~ 219 (231)
T PRK13213 216 DKHY 219 (231)
T ss_pred HHHH
Confidence 5543
No 5
>PRK12348 sgaE L-ribulose-5-phosphate 4-epimerase; Reviewed
Probab=100.00 E-value=6e-43 Score=337.05 Aligned_cols=203 Identities=17% Similarity=0.242 Sum_probs=168.5
Q ss_pred HHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCCCCCCCCC
Q 009774 28 KETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPH 107 (526)
Q Consensus 28 ~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~~~~p~~~ 107 (526)
+++|++|+++||+|+++||+.+++||||+|++++ +.|+|||||.++++|+++||++||+||++++|. .+|
T Consensus 2 ~~~~~~l~~~~~~l~~~Gl~~g~~GNiS~r~~~~------~~~lItPsG~~~~~l~~~dlv~vd~dG~~ieg~-~kp--- 71 (228)
T PRK12348 2 QKLKQQVFEANMDLPRYGLVTFTWGNVSAIDRER------GLVVIKPSGVAYETMKADDMVVVDMSGKVVEGE-YRP--- 71 (228)
T ss_pred HHHHHHHHHHHHHHHHcCCCCcCCCeEEEEeCCC------CEEEEeCCCCChhhCCHHHEEEECCCCCCCCCC-CCC---
Confidence 4589999999999999999999999999998763 489999999999999999999999999999986 355
Q ss_pred CCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCccccc-HHHHHhhhcCCcccCccceeeecCC-----
Q 009774 108 KPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRIT-HMEMIKGIKGHGYYDELVVPIIENT----- 180 (526)
Q Consensus 108 ~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~vpv~~~~----- 180 (526)
|+|+.||+.|||+| |++||||+||||+++||+++.. +|.. ..+.. .+.| .||++++.
T Consensus 72 -----ssE~~lH~~IYr~rpdv~aVvHtH~p~ata~a~~~~~---ip~~~~~~~~-~~~g-------~i~~~~~~~~~~~ 135 (228)
T PRK12348 72 -----SSDTATHLELYRRYPSLGGIVHTHSTHATAWAQAGLA---IPALGTTHAD-YFFG-------DIPCTRGLSEEEV 135 (228)
T ss_pred -----CccHHHHHHHHHhCCCCCEEEecCcHHHHHHHHcCCC---CCCccHHHHH-HhCC-------CeeeecCCCchhh
Confidence 99999999999999 9999999999999999999753 4432 22222 2223 38888762
Q ss_pred --CCchHHHHHHHHHHhhC--CCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcccccc
Q 009774 181 --AYENELTDSLAKAIDAY--PKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFK 256 (526)
Q Consensus 181 --~~~~~la~~i~~~l~~~--~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~ 256 (526)
++..++++.+++.|++. .+.+++||+|||++++|+|+.+||.+++.+|++||+++.++++|.+....+++.++++.
T Consensus 136 ~~~~~~~~~~~la~~l~~~~~~~~~avlL~nHG~v~~G~~l~eA~~~~~~lE~~a~~~~~a~~lg~~~~~~~~~~~~~~~ 215 (228)
T PRK12348 136 QGEYELNTGKVIIETLGNAEPLHTPGIVVYQHGPFAWGKDAHDAVHNAVVMEEVAKMAWIARGINPQLNHIDSYLMNKHF 215 (228)
T ss_pred ccchhhhHHHHHHHHHhhcCcccCcEEEEcCCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHH
Confidence 23346788899999863 13479999999999999999999999999999999999999999644444444655553
No 6
>PRK08193 araD L-ribulose-5-phosphate 4-epimerase; Reviewed
Probab=100.00 E-value=6.9e-43 Score=337.56 Aligned_cols=204 Identities=20% Similarity=0.290 Sum_probs=170.9
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCCCCCCCC
Q 009774 27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYP 106 (526)
Q Consensus 27 ~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~~~~p~~ 106 (526)
.+++|++|+++||+|+++||+.+++||||+|++++ +.|||||||.++++|+++||++||+||++++|. .+|
T Consensus 2 ~~~~r~~i~~~~~~l~~~gl~~g~~GNiS~r~~~~------~~~~ItpsG~~~~~l~~~Div~vd~dG~~~~g~-~kP-- 72 (231)
T PRK08193 2 LEDLKQEVLEANLALPKHGLVTFTWGNVSAIDRER------GLFVIKPSGVDYDKMTAEDMVVVDLEGNVVEGK-LKP-- 72 (231)
T ss_pred hHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEecCC------CEEEEeCCCCChhhCChHHEEEECCCCCCCCCC-CCc--
Confidence 56789999999999999999999999999998663 479999999999999999999999999999986 355
Q ss_pred CCCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCcccCccceeeecCCC----
Q 009774 107 HKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTA---- 181 (526)
Q Consensus 107 ~~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~~---- 181 (526)
|+|+.||..|||.| |++||+|+||||+++||+.+. +++.........+.| .||+++|.+
T Consensus 73 ------SsE~~~H~~IYr~rpdv~AVvHtHsp~ata~s~~~~---~l~~~~~~~~~~~~~-------~ip~~~~~~~~~~ 136 (231)
T PRK08193 73 ------SSDTPTHLVLYKAFPEIGGIVHTHSRHATAWAQAGR---DIPALGTTHADYFYG-------DIPCTRKMTDEEI 136 (231)
T ss_pred ------CccHHHHHHHHHhCCCCcEEEecCcHHHHHHHhcCC---CCCcchHHHHHHhCC-------CcceecCCCcccc
Confidence 99999999999999 999999999999999999874 333222211122222 399998743
Q ss_pred ---CchHHHHHHHHHHhhC----CCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcccc
Q 009774 182 ---YENELTDSLAKAIDAY----PKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRN 254 (526)
Q Consensus 182 ---~~~~la~~i~~~l~~~----~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~ 254 (526)
++.++++.+++.|++. ++.+++||+|||+++||+|+++|+.+++.+|++|++++.++++|......+++++++
T Consensus 137 ~~~~~~~~~~~ia~~l~~~~~~~~~~~avLl~nHG~v~~G~~l~eA~~~~e~lE~~a~~~~~a~~lg~~~~~l~~e~~~~ 216 (231)
T PRK08193 137 NGEYEWETGKVIVETFEKRGIDPAAVPGVLVHSHGPFTWGKDAEDAVHNAVVLEEVAKMAYFTRQLNPQLPDMQQTLLDK 216 (231)
T ss_pred cccchhhHHHHHHHHHhhccCCcccCCEEEEcCCCceEecCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCHHHHHH
Confidence 3457899999999863 245899999999999999999999999999999999999999994444444546665
Q ss_pred c
Q 009774 255 F 255 (526)
Q Consensus 255 ~ 255 (526)
.
T Consensus 217 ~ 217 (231)
T PRK08193 217 H 217 (231)
T ss_pred H
Confidence 4
No 7
>PRK07490 hypothetical protein; Provisional
Probab=100.00 E-value=4.1e-43 Score=341.87 Aligned_cols=210 Identities=15% Similarity=0.175 Sum_probs=177.2
Q ss_pred HhhccHHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCC-CcccCC
Q 009774 22 LEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNG-TTLSSP 100 (526)
Q Consensus 22 ~~~~~~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg-~~~~g~ 100 (526)
|.+|+++++|++|+++||.++++||+.+++||||+|++++ .+.|||||||.++++|+++||++||+|| ++++|.
T Consensus 3 ~~~~~~~~~r~~l~~~~r~l~~~Gl~~g~~GniS~r~~~~-----~~~~lItpsG~~~~~l~~~div~vd~dg~~~~~g~ 77 (245)
T PRK07490 3 MALSDEEQIRVDLAAAFRWIARLGMHEAVANHFSAAVSAD-----GKQFLLNPKWKHFSRIRASDLLLLDADDPSTAERP 77 (245)
T ss_pred cccHHHHHHHHHHHHHHHHHHHcCCcccccceEEEEccCC-----CCeEEEcCCCCChhhCcHHHeEEEcCCCCcccCCC
Confidence 5567889999999999999999999999999999998742 2489999999999999999999999999 567775
Q ss_pred CCCCCCCCCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCcccCccceeee-c
Q 009774 101 SPKPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPII-E 178 (526)
Q Consensus 101 ~~~p~~~~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~-~ 178 (526)
+.+| |+|+.||+.|||.| |++||+|+||+|+++||++..+ .+|........ +.| .||++ +
T Consensus 78 ~~~p--------sse~~lH~~iYr~rpdv~aVvHtH~~~ata~s~~~~~--~lp~~~~~~~~-~~g-------~v~~~~~ 139 (245)
T PRK07490 78 DVPD--------ATAWAIHGQIHRRLPHARCVMHVHSVYATALACLADP--TLPPIDQNTAR-FFN-------RVAVDTL 139 (245)
T ss_pred CCCC--------cHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHhcCC--CCCCccHHHHH-HcC-------CeeeccC
Confidence 3223 89999999999999 9999999999999999998642 24333232222 222 38886 4
Q ss_pred CC-CCchHHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCccccccc
Q 009774 179 NT-AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKL 257 (526)
Q Consensus 179 ~~-~~~~~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~~ 257 (526)
|. +++.++++.+++.|++ .++|||+|||+++||+|+++|+.+++.+|++|++++.++++|.+....++++++++..
T Consensus 140 y~~~~~~ela~~v~~~l~~---~~avlL~nHG~v~~G~~~~eA~~~~e~lE~~a~~~l~a~~~G~~~~~l~~~~~~~~~~ 216 (245)
T PRK07490 140 YGGMALEEEGERLAGLLGD---KRRLLMGNHGVLVTGDTVAEAFDDLYYFERACQTYITALSTGQPLRVLSDAVAEKTAR 216 (245)
T ss_pred CCCcCcHHHHHHHHHHhCc---CCEEEECCCCcEEecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 64 5788999999999986 5999999999999999999999999999999999999999998755566667777654
No 8
>TIGR00760 araD L-ribulose-5-phosphate 4-epimerase. The homolog to this family from Mycobacterium smegmatis is flanked by putative araB and araA genes, consistent with it also being araD.
Probab=100.00 E-value=9.6e-43 Score=336.31 Aligned_cols=205 Identities=20% Similarity=0.287 Sum_probs=171.6
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCC-CCcccCCCCCCC
Q 009774 27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGN-GTTLSSPSPKPY 105 (526)
Q Consensus 27 ~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~d-g~~~~g~~~~p~ 105 (526)
.+++|++|+++||+|+++||+.+++||||+|++++ +.|||||||.++++|+++||++||+| |++++|. .+|
T Consensus 2 ~~~~~~ei~~~~~~l~~~gl~~~~~GNiS~R~~~~------~~~lITPsG~~~~~l~~~div~vdl~~G~~i~g~-~kp- 73 (231)
T TIGR00760 2 LEQLKKEVLEANLALPKHQLVTFTWGNVSAIDRER------GLVVIKPSGVEYDVMTADDMVVVDLETGNVVEGS-KKP- 73 (231)
T ss_pred hHHHHHHHHHHHHHHHHCCCCCCCCCeEEEEecCC------CEEEEeCCCCChhhCCHHHEEEEcCcCCccCCCC-CCC-
Confidence 56789999999999999999999999999998663 48999999999999999999999999 9999986 355
Q ss_pred CCCCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCcccccH-HHHHhhhcCCcccCccceeeecCC---
Q 009774 106 PHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITH-MEMIKGIKGHGYYDELVVPIIENT--- 180 (526)
Q Consensus 106 ~~~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~vpv~~~~--- 180 (526)
|+|+.||+.|||+| ||+||||+||||+++||+++. ++|... ++.. .+.| .||++++.
T Consensus 74 -------S~E~~lH~~IYr~rpdv~aVvHtH~p~ata~a~~~~---~lp~~~~~~~~-~~~g-------~ip~~~~~~~~ 135 (231)
T TIGR00760 74 -------SSDTPTHLALYRAFPSIGGIVHTHSRHATIWAQAGK---DIPALGTTHAD-YFYG-------TIPCTRPMTDE 135 (231)
T ss_pred -------CccHHHHHHHHHhCCCCCEEEecCcHHHHHHHHcCC---CCCCcchHHHH-HhCC-------ceeeecCCCcc
Confidence 99999999999999 999999999999999999975 333322 2222 2222 38988753
Q ss_pred ----CCchHHHHHHHHHHhhC----CCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcc
Q 009774 181 ----AYENELTDSLAKAIDAY----PKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPT 252 (526)
Q Consensus 181 ----~~~~~la~~i~~~l~~~----~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~ 252 (526)
++..++++.+++++++. .+.+++||+|||++++|+|+.+||.+++.+|++||+++.++++|.+....+++++
T Consensus 136 ~~~~~~~~~~~~~la~~l~~~~~~~~~~~avlL~nHGvv~~G~~l~eA~~~~e~lE~~Ak~~~~a~~~g~~~~~~~~~~~ 215 (231)
T TIGR00760 136 EINGEYELETGKVIVETFEKRGIDPAQIPGVLVHSHGPFAWGKDAANAVHNAVVLEEVAYMALFSRQLNPQLPPMQQTLL 215 (231)
T ss_pred cccccchHhHHHHHHHHHhhccCCcccCCEEEEcCCCceEecCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCHHHH
Confidence 23457899999999863 1237999999999999999999999999999999999999999975555556566
Q ss_pred ccccc
Q 009774 253 RNFKL 257 (526)
Q Consensus 253 ~~~~~ 257 (526)
+++..
T Consensus 216 ~~~~~ 220 (231)
T TIGR00760 216 DKHYL 220 (231)
T ss_pred HHHHH
Confidence 66543
No 9
>cd00398 Aldolase_II Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). Class II enzymes are further divided into two sub-classes A and B. This family includes class II A aldolases and adducins which has not been ascribed any enzymatic function. Members of this class are primarily bacterial and eukaryotic in origin and include L-fuculose-1-phosphate, L-rhamnulose-1-phosphate aldolases and L-ribulose-5-phosphate 4-epimerases. They all share the ability to promote carbon-carbon bond cleavage and stabilize enolate intermediates using divalent cations.
Probab=100.00 E-value=6.6e-43 Score=334.10 Aligned_cols=201 Identities=26% Similarity=0.429 Sum_probs=174.3
Q ss_pred HHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCCCCCCCCCC
Q 009774 29 ETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHK 108 (526)
Q Consensus 29 ~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~~~~p~~~~ 108 (526)
+.|++|+++||+++++||+.+++||||+|++++ +.|||||||.++++++++||++||++|++++|. +|
T Consensus 2 ~~~~~l~~~~r~l~~~Gl~~~~~GniS~R~~~~------~~~~itpsG~~~~~l~~~dlv~vd~~g~~~~g~--~p---- 69 (209)
T cd00398 2 KLKRKIIAACLLLDLYGWVTGTGGNVSARDRDR------GYFLITPSGVDYEEMTASDLVVVDAQGKVVEGK--KP---- 69 (209)
T ss_pred hHHHHHHHHHHHHHHcCCcccCCceEEEEeCCC------CEEEEeCCCCChHHCCHhhEEEEcCCCCCcCCC--CC----
Confidence 478999999999999999999999999999873 489999999999999999999999999999853 55
Q ss_pred CCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCcccCccceeeecCC-C--Cch
Q 009774 109 PPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-A--YEN 184 (526)
Q Consensus 109 p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~-~--~~~ 184 (526)
|+|+.||..||++| |++||+|+||+|+++||+.+. ..+|..+.++...+.+ .||++||. | ++.
T Consensus 70 ----s~E~~lH~~iy~~rpdv~aViHtH~~~~~a~s~~~~--~~~p~~~~~~~~~~~~-------~ip~~~~~~~~~~~~ 136 (209)
T cd00398 70 ----SSETPLHLALYRARPDIGCIVHTHSTHATAVSQLKE--GLIPAGHTACAVYFTG-------DIPCTPYMTPETGED 136 (209)
T ss_pred ----CccHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHhCC--CCCCcchHHHHHHcCC-------CeeecCCcCCCccHH
Confidence 99999999999999 999999999999999999875 2455555544433322 39999995 5 688
Q ss_pred HHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCccccccc
Q 009774 185 ELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKL 257 (526)
Q Consensus 185 ~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~~ 257 (526)
++++.+++.+.+ .+++||+|||+++||+|+.+|+.+++.+|++|++++.++++|++....+++++++++.
T Consensus 137 ~la~~~~~~l~~---~~~vll~nHG~~~~G~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~~~l~~~~~~~~~~ 206 (209)
T cd00398 137 EIGTQRALGFPN---SKAVLLRNHGLFAWGPTLDEAFHLAVVLEVAAEIQLKALSMGGQLPPISLELLNKEYL 206 (209)
T ss_pred HHHHHHhcCCCc---CCEEEEcCCCCeEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHh
Confidence 888888888765 5999999999999999999999999999999999999999998765566667776643
No 10
>PRK05834 hypothetical protein; Provisional
Probab=100.00 E-value=1.4e-42 Score=325.53 Aligned_cols=186 Identities=8% Similarity=0.109 Sum_probs=160.9
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCCCCCCCC
Q 009774 27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYP 106 (526)
Q Consensus 27 ~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~~~~p~~ 106 (526)
..++|++|++++++++++||+.+++||||+|++++ .|+|||||.++++|+++||++| +||+..++. +|
T Consensus 3 ~~~~~~el~~~~~~l~~~gl~~gt~GNiS~R~~~~-------~~lITPsG~~~~~l~~ediv~v-~~g~~~~~~--kP-- 70 (194)
T PRK05834 3 DSNLIDELKSISLSMFRKNFFGLYHGSISAKIEAN-------QFIINKQNAIFDELDENSLIVL-YDKKDYRWK--EA-- 70 (194)
T ss_pred HHHHHHHHHHHHHHHHHCCCcccccceEEEEeCCC-------cEEEeCCCCccccCCHHHeEEE-eCCCccCCC--CC--
Confidence 34789999999999999999999999999999763 7999999999999999999999 999877653 55
Q ss_pred CCCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCcccCccceeeecCCC-Cch
Q 009774 107 HKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTA-YEN 184 (526)
Q Consensus 107 ~~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~~-~~~ 184 (526)
|+|+.||+.||+.| |++||+|+||+|++++|+.+. +++...+++...+ | .||+++|.+ ++.
T Consensus 71 ------SsE~~~H~~IY~~rpdv~AVvHtHs~~ata~s~~~~---~i~~~~~~~~~~~-g-------~ipv~~~~~~~~~ 133 (194)
T PRK05834 71 ------SIDSPIHASIYKNISEAKFIAYAMPPYTTAYSLRHN---KILPRDYFGYRSL-G-------EISIYDPKDFDDW 133 (194)
T ss_pred ------CccHHHHHHHHhcCCCCCEEEEeCCHHHHHHHhcCC---CcCccChhHHhhC-C-------eeeecCccccchH
Confidence 99999999999999 999999999999999999864 4554555554322 2 399998753 443
Q ss_pred --HHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 009774 185 --ELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGL 242 (526)
Q Consensus 185 --~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~ 242 (526)
++++++++.|++. ..+++||+|||+++||+|+++|+.+++.+|++|++++.++++|.
T Consensus 134 ~~~la~~v~~~l~~~-~~~avLL~nHGvv~~G~~l~eA~~~~e~lE~~a~i~~~a~~~~~ 192 (194)
T PRK05834 134 YERADTEILRYLQEK-NKNFVVIKGYGVYAYARDIYELAKKIAILENSCKILRLSDLMDR 192 (194)
T ss_pred HHhHHHHHHHHHhhc-CCCEEEEcCCcceEECCCHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 5789999999863 23599999999999999999999999999999999999999885
No 11
>PRK12347 sgbE L-ribulose-5-phosphate 4-epimerase; Reviewed
Probab=100.00 E-value=2e-42 Score=333.51 Aligned_cols=203 Identities=19% Similarity=0.282 Sum_probs=169.6
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeC-CCCcccCCCCCCC
Q 009774 27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSG-NGTTLSSPSPKPY 105 (526)
Q Consensus 27 ~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~-dg~~~~g~~~~p~ 105 (526)
++++|++|+++||+|+++||+.+++||||+|++++ +.|||||||+++++|+++||++||+ +|++++|. .+|
T Consensus 2 ~~~~~~~iv~~~~~l~~~gl~~~t~GNiS~R~~~~------~~~~ItPsG~~~~~l~~~div~vd~~~G~~i~g~-~kp- 73 (231)
T PRK12347 2 LEQLKADVLAANLALPAHHLVTFTWGNVSAVDETR------QLMVIKPSGVEYDVMTADDMVVVEIASGKVVEGS-KKP- 73 (231)
T ss_pred hHHHHHHHHHHHHHHHHCCCCCCCCceEEEEecCC------CeEEEeCCCCCcccCCHHHEEEEEcCCCcCCCCC-CCc-
Confidence 56789999999999999999999999999998763 4799999999999999999999999 99999986 355
Q ss_pred CCCCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCccccc-HHHHHhhhcCCcccCccceeeecCC---
Q 009774 106 PHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRIT-HMEMIKGIKGHGYYDELVVPIIENT--- 180 (526)
Q Consensus 106 ~~~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~vpv~~~~--- 180 (526)
|+|+.||+.|||.| |++||+|+||||+++||+++.+ +|.. ..+. ..+.| .||+++|.
T Consensus 74 -------S~E~~lH~~iYr~rpdv~aViHtHs~~ata~a~~~~~---lp~~~~~~~-~~~~g-------~Ip~~~~~~~~ 135 (231)
T PRK12347 74 -------SSDTPTHLALYRRYPEIGGIVHTHSRHATIWSQAGLD---LPAWGTTHA-DYFYG-------AIPCTRLMTAE 135 (231)
T ss_pred -------CccHHHHHHHHHhCCCCCEEEecCcHHHHHHHHcCCC---CCCcchHHH-HHhCC-------ceeeecccCch
Confidence 99999999999999 9999999999999999999753 3332 2222 22223 38998763
Q ss_pred ----CCchHHHHHHHHHHhhC----CCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcc
Q 009774 181 ----AYENELTDSLAKAIDAY----PKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPT 252 (526)
Q Consensus 181 ----~~~~~la~~i~~~l~~~----~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~ 252 (526)
++..++++.+++.++.+ ++.++|||+|||++++|+|+.+||.+++.+|++||+++.++++|......+++++
T Consensus 136 ~~a~~~~~e~~~~va~~l~~~~~~~~~~~avLL~NHG~v~~G~~l~eA~~~~e~lE~~A~~~~~a~~lg~~~~~~~~~~~ 215 (231)
T PRK12347 136 EINGEYEYQTGEVIIETFEERGISPAQIPAVLVHSHGPFAWGKNAADAVHNAVVLEECAYMGLFSRQLAPQLPAMQNELL 215 (231)
T ss_pred hcccccchhhHHHHHHHHhhccccccCCCEEEEcCCCceEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHH
Confidence 34557899999999853 2468999999999999999999999999999999999999999933333444455
Q ss_pred ccc
Q 009774 253 RNF 255 (526)
Q Consensus 253 ~~~ 255 (526)
++.
T Consensus 216 ~~~ 218 (231)
T PRK12347 216 DKH 218 (231)
T ss_pred HHH
Confidence 554
No 12
>PRK06755 hypothetical protein; Validated
Probab=100.00 E-value=4.4e-42 Score=324.55 Aligned_cols=201 Identities=19% Similarity=0.293 Sum_probs=169.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCCCCCCCC
Q 009774 27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYP 106 (526)
Q Consensus 27 ~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~~~~p~~ 106 (526)
+.+.|++|++++|+++++||+.+++||+|+|.+++ ...|+|||||.++++|+|+||++||++|+++.+++.||
T Consensus 4 ~~~~~~~l~~~~~~l~~rGw~~gtsGNlSv~~~~~-----~~~~~ITpSG~~k~~L~~eDiv~vd~~g~~~~~~~~kP-- 76 (209)
T PRK06755 4 FLKKWNELKDVKSELALRDWFYGTKISLSLCTSKE-----PLTFLVNVEGRDKGLFSEEDFIVVNCMCEPVFENEEKP-- 76 (209)
T ss_pred HHHHHHHHHHHHHHHHHCCCCccCCCCeEEEecCC-----CcEEEEeCCCCCcccCCcccEEEEeCCCCCccCCCCCc--
Confidence 34678999999999999999999999999987653 12699999999999999999999999999884332455
Q ss_pred CCCCCCCCchHHHHHHHHhcCcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCcccCccceeeecCC-CCchH
Q 009774 107 HKPPKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AYENE 185 (526)
Q Consensus 107 ~~p~~~S~E~~lH~~iy~~~dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~-~~~~~ 185 (526)
|+|+.||+.||+.++++||+|+||+|++++|+.......+|+...++++.+++ .+-.+..||++||. +++.+
T Consensus 77 ------SsE~~~H~~IY~~~~~~AVvHtHs~~at~ls~~~~~~~~i~~~~~e~~~~~g~-~~~~~~~IPiv~~~~~~~~~ 149 (209)
T PRK06755 77 ------AAESFMHADIYKKSSAECILQVQTVDSHLISELYGEEGEVTFDKRSVERVFGK-EGITEMTIPIVEDEKKFADL 149 (209)
T ss_pred ------CccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHhhccCCcccccchHHHHHhcc-cCCCceEEEEEeCCCchhHH
Confidence 99999999999988999999999999999999832223466566777777643 23222359999986 56788
Q ss_pred HHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Q 009774 186 LTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDW 244 (526)
Q Consensus 186 la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~ 244 (526)
+++.+++.+++ .++|||+|||+++||+|+++|+.++|.+|++|++++.++++++.+
T Consensus 150 la~~~~~~~~~---~~avLl~~HGv~~~G~~l~eA~~~~E~lE~l~~~~~~~~~l~~~~ 205 (209)
T PRK06755 150 LENNVPNFIEG---GGVVLVHNYGMIVWGKTPEEAKKWLEGIEYLMNYHVKLLMIKGAK 205 (209)
T ss_pred HHHHHHhhccC---CCEEEEcCCCeEEEcCCHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 88888888865 599999999999999999999999999999999999999877653
No 13
>PRK06557 L-ribulose-5-phosphate 4-epimerase; Validated
Probab=100.00 E-value=1.8e-42 Score=333.56 Aligned_cols=204 Identities=21% Similarity=0.320 Sum_probs=174.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCCCCCCCC
Q 009774 27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYP 106 (526)
Q Consensus 27 ~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~~~~p~~ 106 (526)
.+++|++|++++|+++++||+.+++||||+|++++ +.|||||||.++++|+++||++||++|++++|. .+|
T Consensus 8 ~~~~~~~l~~~~r~l~~~Gl~~~~~GNiS~R~~~~------~~~~ItpsG~~~~~l~~~div~vd~~G~~~~g~-~~p-- 78 (221)
T PRK06557 8 VEKLREEVCKLHLELPKYGLVVWTSGNVSARDPGT------DLVVIKPSGVSYDDLTPEDMVVVDLDGNVVEGD-LKP-- 78 (221)
T ss_pred HHHHHHHHHHHHHHHHHCCCccccCceEEEEeCCC------CEEEEeCCCCChhhCCHHHEEEEcCCCCCcCCC-CCC--
Confidence 56789999999999999999999999999999763 489999999999999999999999999999885 355
Q ss_pred CCCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCcccCccceeeecCC-CCch
Q 009774 107 HKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AYEN 184 (526)
Q Consensus 107 ~~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~-~~~~ 184 (526)
|+|+.||..||+.| ||+||+|+||+|+++||+++. ++|.........+.+ .||+++|. +++.
T Consensus 79 ------s~E~~lH~~iy~~~pdv~aVvH~H~~~~~a~a~~~~---~~p~~~~~~~~~~~~-------~ip~~~y~~~g~~ 142 (221)
T PRK06557 79 ------SSDTASHLYVYRHMPDVGGVVHTHSTYATAWAARGE---PIPCVLTAMADEFGG-------PIPVGPFALIGDE 142 (221)
T ss_pred ------CccHHHHHHHHHhCCCCCEEEeeCcHHHHHHHHhCC---CCChhHHHHHHHhCC-------CeeccCCcCCCcH
Confidence 89999999999999 999999999999999999875 344322222222222 49999996 5889
Q ss_pred HHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCccccccc
Q 009774 185 ELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKL 257 (526)
Q Consensus 185 ~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~~ 257 (526)
++++.+++.|.. ++.+++||+|||+++||+|+++|+.+++.+|++|++++.++++|++.+++ +++++++..
T Consensus 143 ela~~i~~~l~~-~~~~~vll~nHG~~~~G~~~~eA~~~~e~lE~~a~~~~~a~~~G~~~~l~-~~~~~~~~~ 213 (221)
T PRK06557 143 AIGKGIVETLKG-GRSPAVLMQNHGVFTIGKDAEDAVKAAVMVEEVARTVHIARQLGEPIPIP-QEEIDRLYD 213 (221)
T ss_pred HHHHHHHHHhCc-CCCCEEEECCCCceEEcCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC-HHHHHHHHH
Confidence 999999999931 23699999999999999999999999999999999999999999887654 446666543
No 14
>PRK06486 hypothetical protein; Provisional
Probab=100.00 E-value=1.2e-42 Score=341.06 Aligned_cols=219 Identities=17% Similarity=0.212 Sum_probs=183.8
Q ss_pred cccchhhHHHHhhccHHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEe
Q 009774 12 AAAATHTQAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLS 91 (526)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd 91 (526)
+|.|+--.-++.+.+++++|++|++++|+++++||+.+++||||+|++++ .+.|||||||.++++|+++||++||
T Consensus 9 ~~~~~~~~~~~~~~~~~~~r~~l~~~~r~l~~~Gl~~gt~GNiSvR~~~~-----~~~~lITPsG~~~~~lt~eDlv~vd 83 (262)
T PRK06486 9 SAPPAGNRPLLDSDAVAQARVDLAACFRAAARHGLEEGICNHFSAVLPGH-----DDLFLVNPYGYAFSEITASDLLICD 83 (262)
T ss_pred CCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHcCCccccCceEEEEecCC-----CCEEEEcCCCCCcccCcHHHeEEEC
Confidence 44555555567777889999999999999999999999999999999762 2489999999999999999999999
Q ss_pred CCCCcccCCCCCCCCCCCCCCC-CchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCccc
Q 009774 92 GNGTTLSSPSPKPYPHKPPKCS-DCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYY 169 (526)
Q Consensus 92 ~dg~~~~g~~~~p~~~~p~~~S-~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~ 169 (526)
++|++++|. .+| | +|+.||..|||+| ||+||||+||+|+++||+... .++++..+++.+.+ |
T Consensus 84 ~dG~~veg~-~kP--------s~~e~~lH~~IYr~rpDv~aVvHtHs~~a~a~s~~~~--~~l~~~~~~~~~~~-g---- 147 (262)
T PRK06486 84 FDGNVLAGR-GEP--------EATAFFIHARIHRAIPRAKAAFHTHMPYATALSLTEG--RPLTTLGQTALKFY-G---- 147 (262)
T ss_pred CCCCCcCCC-CCC--------ChhHHHHHHHHHHhCCCCCEEEEeCChHHhhhhhcCC--CCCCcccHHHHHHC-C----
Confidence 999999986 355 5 5699999999999 999999999999999999842 24554455554422 2
Q ss_pred Cccceeeec-C--CCCchHHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCC
Q 009774 170 DELVVPIIE-N--TAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWST 246 (526)
Q Consensus 170 ~~~~vpv~~-~--~~~~~~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~~~ 246 (526)
.||+++ | .+++.++++.++++|++ .++|||+|||+++||+|+++|+.+++.+|++|++++.++++|.+...
T Consensus 148 ---~i~~~~~~~~~~~s~ela~~va~al~~---~~avLL~nHG~v~~G~~l~eA~~~~~~lE~~a~i~~~a~~~G~~~~~ 221 (262)
T PRK06486 148 ---RTAVDEDYNGLALDAAEGDRIARAMGD---ADIVFLKNHGVMVCGPRIAEAWDDLYYLERACEVQVLAMSTGRPLVP 221 (262)
T ss_pred ---CeeeccCCCCccCchhHHHHHHHHhCc---CCEEEECCCCCeEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 378776 3 24678999999999986 59999999999999999999999999999999999999999987666
Q ss_pred CCCCccccccc
Q 009774 247 PNHGPTRNFKL 257 (526)
Q Consensus 247 ~~~~~~~~~~~ 257 (526)
++++.++++..
T Consensus 222 ~~~~~~~~~~~ 232 (262)
T PRK06486 222 VDPAIAAAVAR 232 (262)
T ss_pred CCHHHHHHHHH
Confidence 66656666533
No 15
>PRK08130 putative aldolase; Validated
Probab=100.00 E-value=1.4e-42 Score=332.27 Aligned_cols=202 Identities=24% Similarity=0.366 Sum_probs=171.3
Q ss_pred ccHHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCCCCCC
Q 009774 25 RAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKP 104 (526)
Q Consensus 25 ~~~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~~~~p 104 (526)
|.++++|++|++++|+++++||+.+++||||+|++++ .|||||||.++++|+++||++||++|++++|. +|
T Consensus 1 ~~~~~~~~~l~~~~~~l~~~gl~~~~~GNiS~R~~~~-------~~lItpsG~~~~~l~~~div~vd~~g~~~~g~--~p 71 (213)
T PRK08130 1 MTEQALREEIVRLGRSLFQRGYTVGSAGNISARLDDG-------GWLVTPTGSCLGRLDPARLSKVDADGNWLSGD--KP 71 (213)
T ss_pred CCHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeCCC-------CEEEeCCCCCccCCCHhHEEEECCCCCCCCCC--CC
Confidence 4578899999999999999999999999999999874 79999999999999999999999999999874 55
Q ss_pred CCCCCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCC--Cccc-ccHHHHHhhhcCCcccCccceeeecCC
Q 009774 105 YPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMS--KEFR-ITHMEMIKGIKGHGYYDELVVPIIENT 180 (526)
Q Consensus 105 ~~~~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~--~~~~-~~~~~~~~~~~g~~~~~~~~vpv~~~~ 180 (526)
|+|+.+|+.||++| |++||+|+||+|+++||+.+... ..++ +....+. .+ | .||++||.
T Consensus 72 --------s~E~~~H~~iy~~rpdv~avvH~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~-~~-g-------~i~v~~y~ 134 (213)
T PRK08130 72 --------SKEVPLHRAIYRNNPECGAVVHLHSTHLTALSCLGGLDPTNVLPPFTPYYVM-RV-G-------HVPLIPYY 134 (213)
T ss_pred --------ChhHHHHHHHHHhCCCCCEEEECCcHHHHHHHhcCccccccCCCCCChhhhh-cc-C-------ccceECCC
Confidence 99999999999999 99999999999999999986310 1222 2222222 12 2 39999985
Q ss_pred -CCchHHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCccccccc
Q 009774 181 -AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKL 257 (526)
Q Consensus 181 -~~~~~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~~ 257 (526)
|++.++++.+++.+++ .++|||+|||+++||+|+++|+.+++.+|++|++++.++.++ +..+ +++++++++.
T Consensus 135 ~~g~~~la~~~~~~l~~---~~~vll~nHGvi~~G~s~~~A~~~~e~lE~~a~~~~~a~~~~-~~~l-~~~~~~~~~~ 207 (213)
T PRK08130 135 RPGDPAIAEALAGLAAR---YRAVLLANHGPVVWGSSLEAAVNATEELEETAKLILLLGGRP-PRYL-TDEEIAELRS 207 (213)
T ss_pred CCChHHHHHHHHHHhcc---CCEEEEcCCCCeeeCCCHHHHHHHHHHHHHHHHHHHHhcCCC-CCCC-CHHHHHHHHH
Confidence 7999999999999987 499999999999999999999999999999999999997653 4444 4457766543
No 16
>PRK06754 mtnB methylthioribulose-1-phosphate dehydratase; Reviewed
Probab=100.00 E-value=4.3e-42 Score=327.07 Aligned_cols=204 Identities=30% Similarity=0.494 Sum_probs=169.4
Q ss_pred cHHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCCCCCCC
Q 009774 26 AVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPY 105 (526)
Q Consensus 26 ~~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~~~~p~ 105 (526)
+.+..+++|+++||+++++||+.+++||||+|++++ ...|||||||.++++|+++||++||.+|++++|.+.+|
T Consensus 3 ~~~~~~~~l~~~~r~l~~~Gl~~g~~GNiSvR~~~~-----~~~~lITpSG~~~~~l~~~div~vd~~g~~~~~~~~kP- 76 (208)
T PRK06754 3 QLQRRWNELAEIKKELAARDWFPATSGNLSIKVSDD-----PLTFLVTASGKDKRKTTPEDFLLVDHDGKPVEETELKP- 76 (208)
T ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCEEEEEeCCC-----CCEEEEeCCCCCcccCCHHHEEEEcCCCCCCCCCCCCC-
Confidence 467789999999999999999999999999999763 12699999999999999999999999999998653455
Q ss_pred CCCCCCCCCchHHHHHHHHhcCcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCcccCccceeeecCCCCchH
Q 009774 106 PHKPPKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENE 185 (526)
Q Consensus 106 ~~~p~~~S~E~~lH~~iy~~~dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~~~~~~ 185 (526)
|+|+.||+.||+..|++||+|+||+|++++|+.......+++...++++.++.........||++++.+++.+
T Consensus 77 -------SsE~~lH~~iY~~pdv~aViHtH~~~at~~s~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~vpv~~~~~~~~e 149 (208)
T PRK06754 77 -------SAETLLHTHIYNNTNAGCVLHVHTVDNNVISELYGDDGAVTFQGQEIIKALGIWEENAEIHIPIIENHADIPT 149 (208)
T ss_pred -------CccHHHHHHHHhCCCCeEEEEeCCHHHHHHHhhcCCCCeeeecChhhhhccCccccCceEEEEEecCCCCHHH
Confidence 9999999999986699999999999999999986432345544445544332100001124899986667899
Q ss_pred HHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Q 009774 186 LTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDW 244 (526)
Q Consensus 186 la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~ 244 (526)
+++.++++++. +.+++||+|||+++||+|+.+|+.++|.+|++|++++.+++++.+.
T Consensus 150 La~~v~~~l~~--~~~avLl~nHG~v~~G~~l~~A~~~~E~lE~~a~~~~~~~~~~~~~ 206 (208)
T PRK06754 150 LAEEFAKHIQG--DSGAVLIRNHGITVWGRDAFEAKKHLEAYEFLFSYHIKLLSIQGGV 206 (208)
T ss_pred HHHHHHHHhcc--CCcEEEECCCceEEEeCCHHHHHHHHHHHHHHHHHHHHHHhhcCcc
Confidence 99999999972 2589999999999999999999999999999999999999987664
No 17
>PRK13145 araD L-ribulose-5-phosphate 4-epimerase; Provisional
Probab=100.00 E-value=3.3e-42 Score=332.59 Aligned_cols=205 Identities=19% Similarity=0.284 Sum_probs=169.1
Q ss_pred cHHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCCCCCCC
Q 009774 26 AVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPY 105 (526)
Q Consensus 26 ~~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~~~~p~ 105 (526)
..+++|++|+++||+|+++||+.+++||||+|.+++ +.|+|||||.++++|+++||++||++|++++|. .+|
T Consensus 2 ~~~~~r~~l~~~~r~l~~~gl~~g~~GNiS~r~~~~------~~~~ItPsg~~~~~l~~~div~vd~~G~~~eG~-~kP- 73 (234)
T PRK13145 2 NLQEMRERVCAANKSLPKHGLVKFTWGNVSEVCREL------GRIVIKPSGVDYDELTPENMVVTDLDGNVVEGD-LNP- 73 (234)
T ss_pred cHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEecCC------CEEEEeCCCCCcccCCHHHEEEECCCCCCcCCC-CCc-
Confidence 467899999999999999999999999999998763 489999999999999999999999999999986 355
Q ss_pred CCCCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCcccCccceeeecCC----
Q 009774 106 PHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT---- 180 (526)
Q Consensus 106 ~~~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~---- 180 (526)
|+|+.||..||+.| ||+||+|+||||+++|++++. ++|.........+.| .||+++|.
T Consensus 74 -------SsE~~lH~~IY~~rpdv~AVvHtH~~~ata~a~~~~---~lp~~~~~~~~~~~g-------~vp~~~~~~~~~ 136 (234)
T PRK13145 74 -------SSDLPTHVELYKAWPEVGGIVHTHSTEAVGWAQAGR---DIPFYGTTHADYFYG-------PIPCARSLTKDE 136 (234)
T ss_pred -------cccHHHHHHHHHhCCCCCEEEeCCCHHHHHHHHcCC---CCCCchhHHHHHhCC-------CcccccccCccc
Confidence 99999999999999 999999999999999999975 344321111122223 38888763
Q ss_pred ---CCchHHHHHHHHHHhhCC----CCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCccc
Q 009774 181 ---AYENELTDSLAKAIDAYP----KATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTR 253 (526)
Q Consensus 181 ---~~~~~la~~i~~~l~~~~----~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~ 253 (526)
++..++++.+++++++.+ +.+++||+|||+++||+|+++||.+++.+|++||+++.++++|......+++.++
T Consensus 137 ~~~~~~~~~~~~va~~l~~~~~~~~~~~avLL~nHG~v~~G~~l~eA~~~~e~lE~~A~~~~~a~~lg~~~~~~~~~~~~ 216 (234)
T PRK13145 137 VNGAYEKETGSVIIEEFEKRGLDPMAVPGIVVRNHGPFTWGKNPEQAVYHSVVLEEVAKMNRLTEQINPRVEPAPQYIMD 216 (234)
T ss_pred cccccchhhHHHHHHHHhhhccccccCCEEEEcCCCeeEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHH
Confidence 235577889999987621 2479999999999999999999999999999999999999999443333443555
Q ss_pred cc
Q 009774 254 NF 255 (526)
Q Consensus 254 ~~ 255 (526)
++
T Consensus 217 ~~ 218 (234)
T PRK13145 217 KH 218 (234)
T ss_pred HH
Confidence 54
No 18
>TIGR01086 fucA L-fuculose phosphate aldolase. Members of this family are L-fuculose phosphate aldolase from various Proteobacteria, encoded in fucose utilization operons. Homologs in other bacteria given similar annotation may share extensive sequence similarity but are not experimenally characterized and are not found in apparent fucose utilization operons; we consider their annotation as L-fuculose phosphate aldolase to be tenuous. This model has been narrowed in scope from the previous version.
Probab=100.00 E-value=3.2e-42 Score=329.79 Aligned_cols=198 Identities=19% Similarity=0.210 Sum_probs=171.1
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCCCCCCCC
Q 009774 27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYP 106 (526)
Q Consensus 27 ~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~~~~p~~ 106 (526)
+.+.|++|+++||+|+++||+.+++||||+|+++ .|||||||+++++|+++||++||+||++++|. +|
T Consensus 2 ~~~~~~~i~~~~~~l~~~Gl~~g~~GNiS~R~~~--------~~lItPsG~~~~~l~~~div~vd~~G~~~~g~--kp-- 69 (214)
T TIGR01086 2 RRELSQRIIDTCLEMTTLGLNQGTAGNVSVRRYQ--------GMLITPTGGPYYEKLTESIVYVIDGGGKEEEK--LP-- 69 (214)
T ss_pred hHHHHHHHHHHHHHHHHcCCCCCCcceEEEECCC--------CEEEECCCCCcccCCHHHEEEEcCCCCCCCCC--CC--
Confidence 4678999999999999999999999999999876 49999999999999999999999999999873 66
Q ss_pred CCCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCcccCccceeeecCC-CCch
Q 009774 107 HKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AYEN 184 (526)
Q Consensus 107 ~~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~-~~~~ 184 (526)
|+|+.+|..||+.+ |++||+|+||+|++++++... ++|...+++....++ .||+++|. +++.
T Consensus 70 ------sse~~~H~~iy~~rpdv~avvH~H~~~~~~~~~~~~---~lp~~~~~~~~~~~~-------~i~~v~y~~~gs~ 133 (214)
T TIGR01086 70 ------SSEWWFHLMAYYQRRPDNAVVHNHHIVCATASILLK---RIPAIHYMVAASGGG-------NIPCVPYATFGST 133 (214)
T ss_pred ------ChhHHHHHHHHHhCCCCCEEEeCCCHHHHHHHHcCC---CCCcchHHHHHhcCC-------CccccCCCCCChH
Confidence 89999999999998 999999999999999998864 344444544432222 38999996 6899
Q ss_pred HHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCccccc
Q 009774 185 ELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNF 255 (526)
Q Consensus 185 ~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~ 255 (526)
++++.+++.+++ .++|||+|||+++||+|+++|+.+++.+|++|++++.++.+|+.....++++++++
T Consensus 134 ~la~~v~~~~~~---~~~vLL~nHG~~~~G~~l~eA~~~~e~lE~~a~~~~~a~~~g~~~~~l~~~~~~~~ 201 (214)
T TIGR01086 134 KLASEVVAGILK---SKAILLLHHGLIIACENLLKALWLAAEVEVLAAQYLKTLLAITDPPPLLSDEMIVV 201 (214)
T ss_pred HHHHHHHHHhhh---CCEEehhcCCCEEecCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCCHHHHHHH
Confidence 999999999986 48999999999999999999999999999999999999988864334444466654
No 19
>PRK06661 hypothetical protein; Provisional
Probab=100.00 E-value=1.2e-41 Score=328.32 Aligned_cols=200 Identities=15% Similarity=0.161 Sum_probs=168.0
Q ss_pred HHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCCCCCCCCCC
Q 009774 29 ETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHK 108 (526)
Q Consensus 29 ~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~~~~p~~~~ 108 (526)
++|++|++++|.|+++||+.+++||||+|++++ +.|||||||.++++|+++||++||+||++++|.. +|
T Consensus 2 ~~r~~l~~a~r~l~~~Gl~~g~~GNiS~R~~~~------~~~lItPsG~~~~~l~~~div~vd~dG~~~~g~~-~~---- 70 (231)
T PRK06661 2 DIKYNLAAAYRIMAYLSLDDHTYTHLSARPKNA------DFYYIYPFGLRFEEVTTENLLKVSLDGQILEGEE-YQ---- 70 (231)
T ss_pred cHHHHHHHHHHHHHHcCCcccCCceEEEEeCCC------CEEEEeCCCCChhhCcHHHeEEECCCCCCcCCCC-CC----
Confidence 468999999999999999999999999998763 4899999999999999999999999999999753 22
Q ss_pred CCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCcccCccceeeecCC-CCc--h
Q 009774 109 PPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AYE--N 184 (526)
Q Consensus 109 p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~-~~~--~ 184 (526)
.+|+|+.||..||++| ||+||+|+||||++++|+.+.+. .|+.+..+ . +.| .||+.+|. +.. .
T Consensus 71 --~~sse~~lH~~IY~~rpdv~aVvH~H~~~a~a~s~~~~~~--~p~~~~~~-~-~~~-------~i~~~~~~~~~~~~~ 137 (231)
T PRK06661 71 --YNKTGYFIHGSIYKTRPDISAIFHYHTPASIAVSALKCGL--LPISQWAL-H-FYD-------RISYHNYNSLALDAD 137 (231)
T ss_pred --CChhHHHHHHHHHHcCCCCCEEEEECChHHHHHHhcCCCC--CCccHhHH-H-HcC-------CceecCCCccccCch
Confidence 1167999999999999 99999999999999999987532 23443322 2 222 38888764 333 6
Q ss_pred HHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhC-CCCCCCCCCCccccc
Q 009774 185 ELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQL-GLDWSTPNHGPTRNF 255 (526)
Q Consensus 185 ~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~-g~~~~~~~~~~~~~~ 255 (526)
+.++.+++++++ .+++||+|||+++||+|+++|+.+++.+|++|++++.++++ |.+..+++++..+..
T Consensus 138 ~~~~~~a~~l~~---~~avll~nHG~v~~G~sl~eA~~~~~~lE~~a~~~~~a~~~~g~~~~l~~~~~~~~~ 206 (231)
T PRK06661 138 KQSSRLVNDLKQ---NYVMLLRNHGAITCGKTIHEAMFYTYHLEQACKTQCLLNSTKKQELIIPSVEICKKT 206 (231)
T ss_pred hHHHHHHHHhCC---CCEEEECCCCCeEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence 779999999986 59999999999999999999999999999999999999999 777777777444444
No 20
>PRK09220 methylthioribulose-1-phosphate dehydratase; Provisional
Probab=100.00 E-value=3.4e-41 Score=319.91 Aligned_cols=201 Identities=24% Similarity=0.445 Sum_probs=171.5
Q ss_pred ccHHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCCCCCC
Q 009774 25 RAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKP 104 (526)
Q Consensus 25 ~~~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~~~~p 104 (526)
|..++.+++|++++|+++++||+.+++||||+|++++ .|||||||.++++|+++||++||++|++++|. .+|
T Consensus 1 ~~~~~~~~~l~~~~r~l~~~Gl~~~~~GNiSvr~~~~-------~~lItpsG~~~~~l~~~di~~vd~~g~~~~~~-~~P 72 (204)
T PRK09220 1 MTLEELLQQLIAAGRWIGARGWVPATSGNMSVRLDEQ-------HCAITVSGKDKGSLTAEDFLQVDIAGNAVPSG-RKP 72 (204)
T ss_pred CcHHHHHHHHHHHHHHHHHCCCCCCCCceEEEEcCCC-------EEEEECCCCChhHCChhhEEEEcCCCCCCCCC-CCc
Confidence 4578899999999999999999999999999999763 89999999999999999999999999999865 355
Q ss_pred CCCCCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCcccC-ccceeeecCCCC
Q 009774 105 YPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYD-ELVVPIIENTAY 182 (526)
Q Consensus 105 ~~~~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~vpv~~~~~~ 182 (526)
|+|+.||+.|||+| |++||+|+||+|++++|+.... ..++...+++.+.++|..+.. ...||++++.++
T Consensus 73 --------s~E~~lH~~iy~~rpdv~aViH~H~~~~~a~s~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~vp~~~~~~~ 143 (204)
T PRK09220 73 --------SAETLLHTQLYRLFPEIGAVLHTHSVNATVLSRVEKS-DALVLEGYELQKAFAGQTTHETAVVVPIFDNDQD 143 (204)
T ss_pred --------ChhHHHHHHHHHhCCCCcEEEecCcHHHHHHHhhcCC-CeeeecChhHHHHhCCCcccCCeeEEeeecCCCC
Confidence 99999999999999 9999999999999999998642 235555566665555432111 124777765557
Q ss_pred chHHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 009774 183 ENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGL 242 (526)
Q Consensus 183 ~~~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~ 242 (526)
+.++++.++++|++++..+++||+|||+++||+|+++|+.++|.+|+.|++.+.+++++.
T Consensus 144 ~~eLa~~v~~~l~~~~~~~avlL~nHGvi~~G~~~~eA~~~~e~lE~~~~~~~~~~~~~~ 203 (204)
T PRK09220 144 IARLAARVAPYLDAQPLRYGYLIRGHGLYCWGRDMAEARRHLEGLEFLFECELERRLLEA 203 (204)
T ss_pred HHHHHHHHHHHHHhCCCCcEEEECCCceEEEcCCHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 899999999999986444699999999999999999999999999999999999998763
No 21
>PRK06357 hypothetical protein; Provisional
Probab=100.00 E-value=3.7e-41 Score=321.41 Aligned_cols=194 Identities=18% Similarity=0.248 Sum_probs=163.8
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCC---CCCCCCCCEEEEe-CCCCcccCCCC
Q 009774 27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQ---KERMEPEDMYVLS-GNGTTLSSPSP 102 (526)
Q Consensus 27 ~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~---~~~l~~~div~vd-~dg~~~~g~~~ 102 (526)
.++.|++|+++||+++++||+.+++||||+|++++ .+.+.|||||||++ +++|+++||++|| .+|++++|. .
T Consensus 3 ~~~~r~~l~~~~r~l~~~Gl~~gt~GNiS~R~~~~---~~~~~~~ITpsg~~g~~~~~lt~~Div~vd~~~g~~~~g~-~ 78 (216)
T PRK06357 3 FQKEREDLAKVVKTMFDRKETNAAGGNISVRMTAE---KNKEYIIMTPTLMSEAKLCDLSPYQILVVDLNTGEVIEGV-G 78 (216)
T ss_pred hHHHHHHHHHHHHHHHHcCCCccCCCEEEEEeccc---CCCCeEEEeCCCCCccccccCCHHHEEEEecCCCeEcCCC-C
Confidence 56789999999999999999999999999999420 01248999999874 9999999999999 589999886 3
Q ss_pred CCCCCCCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCcccCccceeeecCC-
Q 009774 103 KPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT- 180 (526)
Q Consensus 103 ~p~~~~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~- 180 (526)
+| |+|+.+|..||+.| |++||+|+||+|+++|++.+.+ +|.... ....+ | .||++||.
T Consensus 79 kP--------SsE~~lH~~IY~~rpdv~aVvH~H~~~ata~a~~~~~---lp~~~~-~~~~~-g-------~i~~~p~~~ 138 (216)
T PRK06357 79 RV--------TREINMHEAAYVANPKIKCVYHSHAKESMFWATLGLE---MPNLTE-ATQKL-G-------KIPTLPFAP 138 (216)
T ss_pred CC--------ChhHHHHHHHHHhCCCCCEEEecCcHHHHHHHHcCCC---CCCccH-HHHhc-C-------CcceecccC
Confidence 55 99999999999999 9999999999999999988753 333222 22222 2 38999985
Q ss_pred CCchHHHHHHHHHHhhCCC---CeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Q 009774 181 AYENELTDSLAKAIDAYPK---ATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDW 244 (526)
Q Consensus 181 ~~~~~la~~i~~~l~~~~~---~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~ 244 (526)
+++.++++.+++++++.+. .+++||+|||+++||+|+.+||.+++.+|++|++++.+++++...
T Consensus 139 ~gs~ela~~v~~~l~~~~~~~~~~~vLl~nHGvv~~G~~l~eA~~~~e~lE~~a~i~~~a~~l~~~~ 205 (216)
T PRK06357 139 ATSPELAEIVRKHLIELGDKAVPSAFLLNSHGIVITDTSLHKAYDILETIEWNAYIAYQATVFDKLG 205 (216)
T ss_pred CCcHHHHHHHHHHHhhcCcccCCCEEEECCCCCeEecCCHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 6899999999999986322 279999999999999999999999999999999999999988653
No 22
>PRK07044 aldolase II superfamily protein; Provisional
Probab=100.00 E-value=2.1e-41 Score=331.40 Aligned_cols=208 Identities=16% Similarity=0.219 Sum_probs=176.0
Q ss_pred hccHHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCCCCC
Q 009774 24 GRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPK 103 (526)
Q Consensus 24 ~~~~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~~~~ 103 (526)
+.+++++|++|+++||.++++||+.+++||||+|++++ .+.|||||||.++++|+++||++||++|++++|.+ +
T Consensus 11 ~~~~~~~r~~l~~~~r~l~~~Gl~~g~~GNiSvR~~~~-----~~~~lITpsG~~~~~l~~~div~vd~~g~~veg~~-~ 84 (252)
T PRK07044 11 SPAEWQARVDLAAAYRLVALLGWDDLIYTHISARVPGE-----EHHFLINPYGLLFDEITASNLVKIDLDGNVVDDSP-Y 84 (252)
T ss_pred CHHHHHHHHHHHHHHHHHHHcCCccccCcEEEEEccCC-----CCeEEEcCCCCChhhcCHHHeEEECCCCCCcCCCC-C
Confidence 45588999999999999999999999999999999752 24799999999999999999999999999998752 2
Q ss_pred CCCCCCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCcccCccceeeecCC--
Q 009774 104 PYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-- 180 (526)
Q Consensus 104 p~~~~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~-- 180 (526)
| .+++|+.||+.||+.| ||+||||+||+|++++|++.... .++.+. ... +.| .||+.+|.
T Consensus 85 ~------~~pse~~lH~~iY~~rpdv~aViHtH~~~a~a~s~~~~~~--~p~~~~-~~~-~~g-------~i~~~~y~~~ 147 (252)
T PRK07044 85 P------VNPAGFTIHSAIHAARPDAHCVMHTHTTAGVAVSAQRDGL--LPLSQH-ALQ-FYG-------RLAYHDYEGI 147 (252)
T ss_pred C------CChHHhHHHHHHHHhCCCCcEEEEECCHHHHHHHHhCCCC--CcchHh-HHH-HcC-------CceeeCCCCC
Confidence 2 1146999999999999 99999999999999999986432 233333 222 222 38888885
Q ss_pred CCchHHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCccccccc
Q 009774 181 AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKL 257 (526)
Q Consensus 181 ~~~~~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~~ 257 (526)
+.+.++++.+++.|++ .++|||+|||+++||+|+++|+.+++.+|++|++++.++++|.+..+++++..+..+.
T Consensus 148 ~~~~e~~~~va~~l~~---~~avLL~nHGvi~~G~~l~eA~~~~e~lE~~a~~~~~a~~lG~~~~~~~~~~~~~~~~ 221 (252)
T PRK07044 148 ALDLDEGERLVADLGD---KPAMLLRNHGLLTVGRTVAEAFLLMYTLERACEIQVAAQAGGGELVLPPPEVAERTAR 221 (252)
T ss_pred cCCHHHHHHHHHHhcc---CCEEEECCCCceEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence 3478889999999986 5999999999999999999999999999999999999999998877777766666666
No 23
>PRK06208 hypothetical protein; Provisional
Probab=100.00 E-value=1.7e-41 Score=333.19 Aligned_cols=206 Identities=16% Similarity=0.209 Sum_probs=173.2
Q ss_pred cHHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCCCCCCC
Q 009774 26 AVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPY 105 (526)
Q Consensus 26 ~~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~~~~p~ 105 (526)
+.+..|++|++++|.|+++||+.+++||||+|++++ .+.|||||||.++++|+++||++||+||++++|. +|+
T Consensus 39 ~~~~~~~~l~~~~r~l~~~Gl~~g~~GNIS~R~~~~-----~~~~lITPsG~~~~~lt~eDiv~vd~dG~~v~G~--~ps 111 (274)
T PRK06208 39 ERLHRKQRLAAAFRLFARFGFDEGLAGHITARDPEL-----PDHFWVNPLGVHFSQIKVSDLLLVDHDGEVVEGD--RPL 111 (274)
T ss_pred HHHHHHHHHHHHHHHHHHcCCccccCceEEEEccCC-----CCeEEEcCCCCChhhCcHHHeEEECCCCCCcCCC--CCC
Confidence 355679999999999999999999999999999752 2489999999999999999999999999999885 441
Q ss_pred CCCCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCcccCccceeeecCCC---
Q 009774 106 PHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTA--- 181 (526)
Q Consensus 106 ~~~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~~--- 181 (526)
.++|+.||..||+.| ||+||+|+||+|++++|+.+.. ++....+.. .+.| .||++++..
T Consensus 112 ------~~sE~~lH~~IYr~rpDv~AViHtHpp~ata~s~~~~~---l~~i~~~~~-~~~~-------~ip~~~~~~g~~ 174 (274)
T PRK06208 112 ------NRAAFAIHSAIHEARPDVVAAAHTHSTYGKAWSTLGRP---LDPITQDAC-AFYE-------DHALFDDFTGVV 174 (274)
T ss_pred ------CHHHHHHHHHHHHhCCCCCEEEEeCchHHHHHHHhCCC---CChhhHHHH-HHcC-------CceeccCCCCcc
Confidence 146899999999999 9999999999999999998753 333333332 2322 388876533
Q ss_pred CchHHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCccccccccc
Q 009774 182 YENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKLGL 259 (526)
Q Consensus 182 ~~~~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~~~~ 259 (526)
++.++++.+++.|++ .++|||+|||+++||+|+++|+.+++.+|++|++++.++++|.+..+ +++++++.++-+
T Consensus 175 ~s~ela~~va~~l~~---~~avLL~NHGvv~~G~tl~eA~~~~e~lE~aA~i~l~a~~~G~~~~L-~~e~~~~~~~~~ 248 (274)
T PRK06208 175 VDTSEGRRIAAALGT---HKAVILQNHGLLTVGPSVDAAAWWFIALERACQTQLLAEAAGPPQPI-DHETARHTRSQV 248 (274)
T ss_pred CchHHHHHHHHHhcc---CCEEEECCCCceEeeCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcCC-CHHHHHHHHHHh
Confidence 488999999999987 49999999999999999999999999999999999999999977655 455888776633
No 24
>PRK07090 class II aldolase/adducin domain protein; Provisional
Probab=100.00 E-value=2.7e-41 Score=330.99 Aligned_cols=206 Identities=18% Similarity=0.226 Sum_probs=169.7
Q ss_pred ccHHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCCCCCC
Q 009774 25 RAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKP 104 (526)
Q Consensus 25 ~~~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~~~~p 104 (526)
.+++.+|++|++++|+++++||+.+++||||+|++++ +.|||||||.++++|+++||++||++|++++|. .+|
T Consensus 26 ~~~~~~r~~l~~~~r~l~~~Gl~~g~~GNiS~R~~~~------~~~lItPsG~~~~~lt~~Div~vd~dG~~v~G~-~kP 98 (260)
T PRK07090 26 DSGWTLRQKLALTCRILFDAGHDSGLAGQITARAEAP------GTYYTQRLGLGFDEITASNLLLVDEDLNVLDGE-GMP 98 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCcccCCceEEEEeCCC------CEEEEeCCCCChhhCCHHHeEEECCCCCCCCCC-CCC
Confidence 3477889999999999999999999999999999763 479999999999999999999999999999986 355
Q ss_pred CCCCCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCcccCccceeeecCCCCc
Q 009774 105 YPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYE 183 (526)
Q Consensus 105 ~~~~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~~~~ 183 (526)
|+|+.||..||++| ||+||+|+||||+++||+.+. +++..++..........+++ .+|.+ |.+
T Consensus 99 --------s~E~~lH~~IYr~rPDv~AVvHtH~p~ata~s~~~~---~l~~~~~~~~~~~~~~~~~~--~~~~i---p~~ 162 (260)
T PRK07090 99 --------NPANRFHSWIYRARPDVNCIIHTHPPHVAALSMLEV---PLVVSHMDTCPLYDDCAFLK--DWPGV---PVG 162 (260)
T ss_pred --------ChhHHHHHHHHHhCCCCCEEEEeCCHHHHHHHhcCC---CCCccchhHHhhccceeecc--CcCCc---CCC
Confidence 89999999999999 999999999999999999874 34332222111111111111 13333 335
Q ss_pred hHHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCccccccc
Q 009774 184 NELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKL 257 (526)
Q Consensus 184 ~~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~~ 257 (526)
.++++.++++|++ .+++||+|||++++|+|+++||.+++.+|++|++++.++++|.+..+++ ++++++.+
T Consensus 163 ~~~a~~va~~l~~---~~avLL~nHGvi~~G~~l~eA~~~~~~LE~~A~i~l~a~~~G~~~~l~~-e~~~~~~~ 232 (260)
T PRK07090 163 NEEGEIISAALGD---KRAILLSHHGQLVAGKSIEEACVLALLIERAARLQLLAMAAGPIKPIPP-ELAREAHD 232 (260)
T ss_pred hHHHHHHHHHhcc---CCEEEECCCCCeEEcCCHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCH-HHHHHHHH
Confidence 5679999999986 4899999999999999999999999999999999999999998776655 47777755
No 25
>TIGR03328 salvage_mtnB methylthioribulose-1-phosphate dehydratase. Members of this family are the methylthioribulose-1-phosphate dehydratase of the methionine salvage pathway. This pathway allows methylthioadenosine, left over from polyamine biosynthesis, to be recycled to methionine.
Probab=100.00 E-value=6.2e-41 Score=315.80 Aligned_cols=190 Identities=37% Similarity=0.720 Sum_probs=165.1
Q ss_pred HHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCCCCCCCCCCCCCCC
Q 009774 34 ISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCS 113 (526)
Q Consensus 34 l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~~~~p~~~~p~~~S 113 (526)
|++++|+++++||+.+++||||+|++++ .|||||||.++++|+++||++||++|++++|. .+| |
T Consensus 1 i~~~~r~l~~~Gl~~~~~GniS~r~~~~-------~~lItpsg~~~~~l~~~di~~v~~~g~~~~g~-~~p--------s 64 (193)
T TIGR03328 1 LIEAGRDLYKRGWVPGTGGNLSARLDED-------EILITPSGVDKGRLTPEDFLVVDLQGKPVSGG-LKP--------S 64 (193)
T ss_pred CHHHHHHHHHcCCCccCCCEEEEEcCCC-------EEEEeCCCCChhhCCcceEEEEcCCCCCCCCC-CCC--------C
Confidence 5789999999999999999999999764 89999999999999999999999999999875 355 9
Q ss_pred CchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCC-cccCccceeeecCCCCchHHHHHHH
Q 009774 114 DCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGH-GYYDELVVPIIENTAYENELTDSLA 191 (526)
Q Consensus 114 ~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~vpv~~~~~~~~~la~~i~ 191 (526)
+|+.+|+.||++| |++||+|+||+|++++|+.......+++..+++++.++|. .|.+...||++++.|++.++++.++
T Consensus 65 ~e~~~H~~iy~~~pdv~aVvH~H~~~a~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~vp~~~~~~gs~ela~~~~ 144 (193)
T TIGR03328 65 AETLLHTQLYRLTPGAGAVLHTHSVEATVLSRLYPSNGAFELEGYEMLKALPGITTHEDKLTIPIFENTQDIARLADSVA 144 (193)
T ss_pred cHHHHHHHHHHhCCCCeEEEEcCCHHHHHHHhhcccCCeeeccchhhhhhhCCCcCCCCceEEeeecCCCChHHHHHHHH
Confidence 9999999999999 9999999999999999988643234666677776655442 1222224999998889999999999
Q ss_pred HHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHh
Q 009774 192 KAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQ 239 (526)
Q Consensus 192 ~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~ 239 (526)
++++++++.++|||+|||+++||+|+++|+.++|.+|++|++.+.++.
T Consensus 145 ~~l~~~~~~~avll~nHGv~~~G~~~~~A~~~~e~lE~~a~~~~~~~~ 192 (193)
T TIGR03328 145 PYLEAYPDVPGVLIRGHGLYAWGRDWEEAKRHLEALEFLFECELEMLK 192 (193)
T ss_pred HHHhcCCCCCEEEEcCCcceEEcCCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999765567999999999999999999999999999999999998865
No 26
>PRK08333 L-fuculose phosphate aldolase; Provisional
Probab=100.00 E-value=7e-41 Score=313.42 Aligned_cols=179 Identities=25% Similarity=0.326 Sum_probs=158.0
Q ss_pred HHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCCCCCCCCC
Q 009774 28 KETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPH 107 (526)
Q Consensus 28 ~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~~~~p~~~ 107 (526)
.++|++|++++|+++++||+.+++||||+|+++ .|||||||.++++++++||++||++|++++|. +|
T Consensus 2 ~~~~~~l~~~~~~~~~~gl~~~~~GNiS~R~~~--------~~lItpsG~~~~~l~~~di~~vd~~g~~~~g~--~P--- 68 (184)
T PRK08333 2 RNVKAQLVKYSKLAHERGLTAAFGGNLSIRVGN--------LVFIKATGSVMDELTREQVAVIDLNGNQLSSV--RP--- 68 (184)
T ss_pred hHHHHHHHHHHHHHHHCCCCcCCCCeEEEEeCC--------EEEEeCCCCCcccCCHHHEEEECCCCCCCCCC--CC---
Confidence 467999999999999999999999999999976 79999999999999999999999999999874 55
Q ss_pred CCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHH-hhcCCCCcccccHHHHHhhhcCCcccCccceeeecCC-CCch
Q 009774 108 KPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVT-MINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AYEN 184 (526)
Q Consensus 108 ~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~-~~~~ 184 (526)
|+|+.+|..|||+| |++||+|+||+|++++| +.+. .+|....+... +.| .||++||. +++.
T Consensus 69 -----s~e~~lH~~iyr~rpdv~aViHtH~~~a~a~s~~~~~---~~p~~~~~~~~-~~~-------~v~v~~~~~~g~~ 132 (184)
T PRK08333 69 -----SSEYRLHLAVYRNRPDVRAIAHLHPPYSIVASTLLEE---ELPIITPEAEL-YLK-------KIPILPFRPAGSV 132 (184)
T ss_pred -----ChhHHHHHHHHHhCCCCCEEEeCCcHHHHHHHHHcCC---CCCCccHHHHH-hCC-------CEeeecCCCCCcH
Confidence 99999999999999 99999999999999999 6553 34433333322 222 39999996 6899
Q ss_pred HHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHH
Q 009774 185 ELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLH 238 (526)
Q Consensus 185 ~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~ 238 (526)
++++.++++|++ .+++||+|||+++||+|+++|+.+++.+|++|++++.+.
T Consensus 133 ~la~~~~~~l~~---~~~vll~nHGv~~~G~~~~eA~~~~e~lE~~A~~~~~~~ 183 (184)
T PRK08333 133 ELAEQVAEAMKE---YDAVIMERHGIVTVGRSLREAFYKAELVEESAKLWYLKF 183 (184)
T ss_pred HHHHHHHHHhcc---CCEEEEcCCCCEEEcCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999986 489999999999999999999999999999999998764
No 27
>PRK08660 L-fuculose phosphate aldolase; Provisional
Probab=100.00 E-value=3.2e-40 Score=308.19 Aligned_cols=180 Identities=18% Similarity=0.297 Sum_probs=156.3
Q ss_pred HHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCCCCCCCCCCC
Q 009774 30 TRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKP 109 (526)
Q Consensus 30 ~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~~~~p~~~~p 109 (526)
.|++|++++|.++++||+.+++||||+|+++ .|||||||.++++|+++|+++||++|+.. +. .+|
T Consensus 1 ~~~~l~~~~~~l~~~gl~~~~~GniS~R~~~--------~~lItpsg~~~~~l~~~dlv~vd~~g~~~-~~-~~p----- 65 (181)
T PRK08660 1 MWQEFARIGKKLFAHGLVSSHFGNISVRTGD--------GLLITRTGSMLDEITEGDVIEVGIDDDGS-VD-PLA----- 65 (181)
T ss_pred CHHHHHHHHHHHHHCCCcccCCceeEEEcCC--------EEEEeCCCCCcccCChhHEEEEcCCCCcc-CC-CCC-----
Confidence 3889999999999999999999999999855 89999999999999999999999999875 33 355
Q ss_pred CCCCCchHHHHHHHHhcCcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCcccCccceeeecCCCCchHHHHH
Q 009774 110 PKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDS 189 (526)
Q Consensus 110 ~~~S~E~~lH~~iy~~~dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~~~~~~la~~ 189 (526)
|+|+.||+.||+.+|++||+|+||+|+++||+.+. .++....+... +.| .||++...+++.++++.
T Consensus 66 ---s~E~~lH~~iy~~~dv~aVvH~H~~~~~a~s~~~~---~l~~~~~~~~~-~~~-------~ipv~~~~~~~~~la~~ 131 (181)
T PRK08660 66 ---SSETPVHRAIYRRTSAKAIVHAHPPYAVALSLLED---EIVPLDSEGLY-FLG-------TIPVVGGDIGSGELAEN 131 (181)
T ss_pred ---CccHHHHHHHHcCCCCCEEEEeCChHHHHHHHcCC---CCCCcCHHHHH-hcC-------CEeEEeCCCCCHHHHHH
Confidence 99999999999955999999999999999999864 33333333332 222 39998335789999999
Q ss_pred HHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCC
Q 009774 190 LAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLG 241 (526)
Q Consensus 190 i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g 241 (526)
++++|++ .+++||+|||+++||+|+++|+.+++.+|++|++++.+++++
T Consensus 132 v~~~l~~---~~~vll~nHG~~~~G~~i~~A~~~~e~lE~~a~i~~~~~~l~ 180 (181)
T PRK08660 132 VARALSE---HKGVVVRGHGTFAIGKTLEEAYIYTSQLEHSCKVLYLVRTAK 180 (181)
T ss_pred HHHHHhh---CCEEEEcCCCceEeCCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999987 499999999999999999999999999999999999998875
No 28
>COG0235 AraD Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.7e-40 Score=318.38 Aligned_cols=198 Identities=29% Similarity=0.449 Sum_probs=172.9
Q ss_pred hccHHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCCCCC
Q 009774 24 GRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPK 103 (526)
Q Consensus 24 ~~~~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~~~~ 103 (526)
.+..++.|++|++++|.++++||+.+++||||+|+++. ..|+|||||+.|++|+++|+++||+||++++|. .+
T Consensus 2 ~~~~~~~~~~l~~~~~~l~~~g~~~~t~GniS~r~~~~------~~~~ItpsG~~~~~lt~~dlv~vd~~G~~~~g~-~~ 74 (219)
T COG0235 2 SMMLEKLRQELAKAARLLARRGLVEGTAGNISVRLPEG------GLFLITPSGVPFGELTADDLVVVDLDGEVVEGG-KK 74 (219)
T ss_pred chhHHHHHHHHHHHHHHHHHcCCCCcCCceEEEEcCCC------ceEEEeCCCCccccCcHHHeEEEeCCCcEecCC-CC
Confidence 35678999999999999999999999999999999883 349999999999999999999999999999983 45
Q ss_pred CCCCCCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCcccCccceeeecCC-C
Q 009774 104 PYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-A 181 (526)
Q Consensus 104 p~~~~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~-~ 181 (526)
| |+|+++|..|||+| |++||+||||+|+++||+.+. .++..+++....+++ .||+++|. +
T Consensus 75 p--------Sse~~~H~~iY~~rpd~~aVvHtHs~~a~als~~~~---~l~~~~~~~~~~~~~-------~i~~~~~~~~ 136 (219)
T COG0235 75 P--------SSETPIHLAIYRARPDAGAVVHTHSPYATALSTLGE---PLPPLGTEHLKYFGG-------GIPCAPYAGP 136 (219)
T ss_pred C--------chhHHHHHHHHHhCCCCCEEEecCcHHHHHHHHhcC---CCCCCCHHHHHHcCC-------CcccccCCCC
Confidence 5 99999999999999 999999999999999999984 555556666666554 39999985 5
Q ss_pred CchHHHHHHHHHHhhCCCCeEE--EEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCC
Q 009774 182 YENELTDSLAKAIDAYPKATAV--LVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNH 249 (526)
Q Consensus 182 ~~~~la~~i~~~l~~~~~~~~v--ll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~~~~~~ 249 (526)
++.+++++++..+... +.+ ||+|||+++||+|+.+|+.+++.+|++|+++++++++|.+....++
T Consensus 137 ~~~~~~~~~~~~~~~~---~~~~~ll~~HG~~~~G~~l~eA~~~~~~lE~~a~~~~~~~~~~~~~~~~~~ 203 (219)
T COG0235 137 GSVELAEALAEAADLA---EAVLKLLRNHGVVAWGKTLAEAVHLAEVLEELAKLQLKALSLGKPLLTAPD 203 (219)
T ss_pred CchhhHHHHHHHHHHH---HHHHHHHHcCCcEEECCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcCH
Confidence 7888888888777652 444 5999999999999999999999999999999999999998763333
No 29
>PRK03634 rhamnulose-1-phosphate aldolase; Provisional
Probab=100.00 E-value=4.2e-40 Score=324.67 Aligned_cols=215 Identities=15% Similarity=0.193 Sum_probs=169.1
Q ss_pred hccHHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCC---------------------CCccEEEEeccCCCCCCC
Q 009774 24 GRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIP---------------------KPQQLILMSPSGVQKERM 82 (526)
Q Consensus 24 ~~~~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~---------------------~~~~~~litpsG~~~~~l 82 (526)
++...+.+++|++++|+++++||+.+++||||+|++++++. ..++.|||||||.++++|
T Consensus 3 ~~~~~~~~~~l~~~~~~l~~~Gl~~~~~GNiSvR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lITpSG~~~~~l 82 (274)
T PRK03634 3 NILDSWFVQGMIKVTSDLWLKGWDERNGGNISLRLTEEEVAPYGDDFHQQPRYIPLSQPMPELAGTYFLVTGSGKFFRNV 82 (274)
T ss_pred chhhHHHHHHHHHHHHHHHHcCCccCCCCeEEEEcCchhhhhhhhccccccccccccccchhccCCEEEEeCCCcChhhh
Confidence 34456789999999999999999999999999999772110 002489999999999999
Q ss_pred --CCC-C--EEEEeCCCCccc---C--CCCCCCCCCCCCCCCchHHHHHHH----Hh-c-CcceEEecCChHHHHHHhhc
Q 009774 83 --EPE-D--MYVLSGNGTTLS---S--PSPKPYPHKPPKCSDCAPLFMKAY----EK-R-DAGAVIHSHGIESCLVTMIN 146 (526)
Q Consensus 83 --~~~-d--iv~vd~dg~~~~---g--~~~~p~~~~p~~~S~E~~lH~~iy----~~-~-dv~aVvH~H~~~~~a~a~~~ 146 (526)
+|+ | +++||.+|++++ | .+.+| |+|+.||+.|| +. | |++||+|+||+|++++|+.+
T Consensus 83 ~~~p~dd~~lv~vd~~G~~~~~~~g~~~~~kP--------SsE~~lH~~IY~~~~~~~rpdv~AVvHtHs~~atals~~~ 154 (274)
T PRK03634 83 QLDPAANLGVIRIDSDGAGYHILWGLTNGGKP--------TSELPAHLMSHIARLKATNGKDRVIMHCHATNLIALTYVL 154 (274)
T ss_pred hcCchhcCCEEEEcCCCCEeeeeccCCCCCCC--------chHHHHHHHHHHHHhhccCCCCcEEEecCchHHHHHHCcC
Confidence 555 5 678899998753 3 12244 99999999999 45 8 99999999999999999986
Q ss_pred CCCC--cccccH----HHHHhhhcCCcccCccceeeecCC-CCchHHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHH
Q 009774 147 PMSK--EFRITH----MEMIKGIKGHGYYDELVVPIIENT-AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWIN 219 (526)
Q Consensus 147 ~~~~--~~~~~~----~~~~~~~~g~~~~~~~~vpv~~~~-~~~~~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~e 219 (526)
. .+ .+.... .+....+++ .||++||. |++.++++++++++++ .++|||+|||+++||+|+++
T Consensus 155 ~-l~~~~~~~~~~~~~~e~~~~~~~-------~i~vvpy~~pgs~eLa~~v~~~l~~---~~avLL~nHGvv~~G~~l~e 223 (274)
T PRK03634 155 E-LDEAVFTRTLWEMSTECLVVFPD-------GVGIVPWMVPGTDEIGQATAEKMQK---HDLVLWPKHGVFGSGPTLDE 223 (274)
T ss_pred C-cChHhhhhhhhhcCccceeEeCC-------ceeEecCCCCCCHHHHHHHHHHhcc---CCEEEEcCCCCeEecCCHHH
Confidence 4 11 110000 111111111 39999995 6999999999999986 48999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCccccccc
Q 009774 220 AKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKL 257 (526)
Q Consensus 220 A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~~ 257 (526)
|+.+++.+|++|++++.++++|+.....+++++++++.
T Consensus 224 A~~~~e~lE~~a~i~l~a~~~G~~~~~l~~e~l~~l~~ 261 (274)
T PRK03634 224 AFGLIDTAEKSAEIYVKVLSMGGMKQTITDEELIALGE 261 (274)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence 99999999999999999999996444455568888755
No 30
>TIGR02624 rhamnu_1P_ald rhamnulose-1-phosphate aldolase. Members of this family are the enzyme RhaD, rhamnulose-1-phosphate aldolase.
Probab=100.00 E-value=5.1e-40 Score=322.40 Aligned_cols=212 Identities=17% Similarity=0.210 Sum_probs=171.1
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCC--------------------CCCccEEEEeccCCCCCCCCC--
Q 009774 27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSI--------------------PKPQQLILMSPSGVQKERMEP-- 84 (526)
Q Consensus 27 ~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~--------------------~~~~~~~litpsG~~~~~l~~-- 84 (526)
...++++|++++++|+++||+.+++||||+|++++++ .-.+++|+|||||.++++|++
T Consensus 6 ~~~~~~~i~~~~~~l~~~Gl~~~~~GNiS~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lITpSG~~~~~l~~~~ 85 (270)
T TIGR02624 6 DSPFVQEMIKTTSDLWRLGWDERNGGNISLRLDEEEVAPYLDFHQVPRKIPLKFPAPELANKYFLVTGSGKFFRNVEENP 85 (270)
T ss_pred cHHHHHHHHHHHHHHHHcCCcCCCCCEEEEEcCccccchhhcccccccccccccccccccCCEEEEeCCCCCHHhcccCc
Confidence 3568999999999999999999999999999976200 000248999999999999994
Q ss_pred -CCE--EEEeCCCCccc------CCCCCCCCCCCCCCCCchHHHHH----HHHhc-CcceEEecCChHHHHHHhhcCCC-
Q 009774 85 -EDM--YVLSGNGTTLS------SPSPKPYPHKPPKCSDCAPLFMK----AYEKR-DAGAVIHSHGIESCLVTMINPMS- 149 (526)
Q Consensus 85 -~di--v~vd~dg~~~~------g~~~~p~~~~p~~~S~E~~lH~~----iy~~~-dv~aVvH~H~~~~~a~a~~~~~~- 149 (526)
+|+ ++||.+|++++ ++ .|| |+|+.||+. ||+.| |++||+|+||+|++++|++....
T Consensus 86 ~~d~~iv~vd~~G~~~~~~~~~~~g-~kP--------SsE~~mH~~v~~~iy~~rpd~~AVvHtHp~~ata~s~~~~~~~ 156 (270)
T TIGR02624 86 AENLGILRVSEDGASVHLLWGLTDG-GVP--------TSELPAHFMSHIARLKVDPENRVIMHCHATNLIAMTFTHELDE 156 (270)
T ss_pred hhceeEEEECCCCCEEEeeccccCC-CCc--------ChHHHHHHHHHHHHHHhCCCCCEEEccCcHHHHHHHccCcccc
Confidence 685 56899999986 33 355 999999986 69999 99999999999999999986411
Q ss_pred Cc----ccccHHHHHhhhcCCcccCccceeeecCC-CCchHHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHH
Q 009774 150 KE----FRITHMEMIKGIKGHGYYDELVVPIIENT-AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQA 224 (526)
Q Consensus 150 ~~----~~~~~~~~~~~~~g~~~~~~~~vpv~~~~-~~~~~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~ 224 (526)
.. ++....++...+++ .||++||. |++.++++.+++.+++ .++|||+|||+++||+|+++|+.++
T Consensus 157 ~~~~~~l~~~~~e~~~~~~~-------~i~vvp~~~pGs~eLA~~v~~~l~~---~~avLL~nHGvva~G~~l~eA~~~~ 226 (270)
T TIGR02624 157 AVFTRTLWQMCTECLVVFPD-------GVGIIPWMVPGTNEIGEATAEKMKE---HRLVLWPHHGIFGAGPSLDETFGLI 226 (270)
T ss_pred hhccccccccccchhheeCC-------ccccccCcCCCCHHHHHHHHHHhcc---CCEEEEcCCCCeEecCCHHHHHHHH
Confidence 11 11111122222322 39999995 7999999999999987 4899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCccccccc
Q 009774 225 ECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKL 257 (526)
Q Consensus 225 ~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~~ 257 (526)
|.+|++|++++.++.+|++....+++++++++.
T Consensus 227 E~lE~~A~i~~~a~~lg~~~~~L~~e~l~~~~~ 259 (270)
T TIGR02624 227 ETAEKSAEVYTKVYSQGGVKQTISDEQLIALAK 259 (270)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence 999999999999999997755566668887755
No 31
>PF00596 Aldolase_II: Class II Aldolase and Adducin N-terminal domain; InterPro: IPR001303 This entry represents the alpha/beta/alpha domain found in class II aldolases and adducin, usually at the N terminus. These proteins form part of a family that includes: rhamnulose-1-phosphate aldolase (4.1.2.19 from EC), L-fuculose phosphate aldolase (4.1.2.17 from EC) [, ] that is involved in the third step in fucose metabolism, L-ribulose- 5-phosphate 4-epimerase (5.1.3.4 from EC) involved in the third step of L-arabinose catabolism, a probable sugar isomerase SgbE, hypothetical proteins and the metazoan adducins which have not been ascribed any enzymatic function but which play a role in cell membrane cytoskeleton organisation. Adducins are members of the Ig superfamily and encode cell surface sialoglycoproteins expressed by cytokine-activated endothelium. This type I membrane protein mediates leukocyte-endothelial cell adhesion and signal transduction, and may play a role in the development of artherosclerosis and rheumatoid arthritis. Adducin is a cell-membrane skeletal protein that was first purified from human erythrocytes and subsequently isolated from bovine brain membranes. Isoforms of this protein have been detected in lung, kidney, testes and liver. Erythrocyte adducin is a 200kDa heterodimer protein, composed of alpha and beta subunits, present at about 30,000 copies per cell. It binds with high affinity to Ca(2+)/calmodulin and is a substrate for protein kinases A and C. Both alpha-adducin and beta-adducin show alternative splicing. Thus, there may be several different heterodimeric or homodimeric forms of adducin, each with a different functional specificity. It is thought to play a role in assembly of the spectrin-actin lattice that underlies the plasma membrane []. Missense mutations in both the alpha- and beta-adducin genes that alter amino acids that are normally phosphorylated have been associated with the regulation of blood pressure in the Milan hypertensive strain (MHS) of rats. Gamma adducin was isolated from human foetal brain []. It shows a high degree of similarity to the alpha and beta adducins.; GO: 0046872 metal ion binding; PDB: 2V9N_B 1GT7_B 2V9O_E 2V9M_B 2V9F_A 2UYV_A 1OJR_A 2V9G_C 2V29_B 2V9I_A ....
Probab=100.00 E-value=9.3e-39 Score=299.94 Aligned_cols=178 Identities=34% Similarity=0.554 Sum_probs=150.3
Q ss_pred HHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCC-CCcccC-C-CCCCCCCC
Q 009774 32 VLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGN-GTTLSS-P-SPKPYPHK 108 (526)
Q Consensus 32 ~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~d-g~~~~g-~-~~~p~~~~ 108 (526)
++|++++|+++++||+.+++||||+|++++ .|||||||.++++++++||++||+| |++++| . ..+|
T Consensus 1 ~~l~~~~r~l~~~g~~~~~~GniS~R~~~~-------~~lit~sg~~~~~l~~~d~~~v~~~~g~~l~g~~~~~~p---- 69 (184)
T PF00596_consen 1 QELAEACRRLYERGLVDGTGGNISVRVPGD-------RFLITPSGVDKDELTPEDIVVVDLDDGNILEGDEGGGKP---- 69 (184)
T ss_dssp HHHHHHHHHHHHTTSSCTTBEEEEEEECTT-------EEEEEBTTS-GGGCTGGGEEEEETTTSEEEEESTTSSCB----
T ss_pred CHHHHHHHHHHHCCCcccCCCeEEEEecCC-------CEEEcCCCCChhhCChhhceEEeccccceeeccCCCCCC----
Confidence 689999999999999999999999999874 9999999999999999999999999 999965 1 2234
Q ss_pred CCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhh-cCCCCcccccHHHHHhhhcCCcccCccceeeecCC-CCchH
Q 009774 109 PPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMI-NPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AYENE 185 (526)
Q Consensus 109 p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~vpv~~~~-~~~~~ 185 (526)
|+|+.+|..||++| |++||+|+||+++++||++ +. +++...++....+.+ ..||+++|. +++.+
T Consensus 70 ----s~e~~lH~~iy~~rpdv~aViH~H~~~~~a~s~~~~~---~l~~~~~~~~~~~~~------~~v~~~~~~~~~~~~ 136 (184)
T PF00596_consen 70 ----SSETPLHAAIYRARPDVNAVIHTHPPYATALSCLAGE---PLPPITQEAARFYFG------GEVPVVPYAPPGSEE 136 (184)
T ss_dssp ----CTTHHHHHHHHHHCTTSSEEEEE--HHHHHHHTSSTC---CCCSSSHHHHHTHTS------SCEEEE-THSTTCHH
T ss_pred ----CHhHHHHhHHHcCCCCCCEEEecChHHHHhHHhhhhc---ccccchhhHHhhhcC------ccceeeccccccchh
Confidence 99999999999999 9999999999999999988 65 333333444432211 149999995 58899
Q ss_pred HHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHH
Q 009774 186 LTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAI 235 (526)
Q Consensus 186 la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~ 235 (526)
+++.+++.|+. +.+++||+|||+++||+|+++|+.+++.+|++||+++
T Consensus 137 l~~~i~~~l~~--~~~~vll~nHG~~~~G~s~~~A~~~~~~lE~~a~~~l 184 (184)
T PF00596_consen 137 LAEAIAEALGE--DRKAVLLRNHGVVVWGKSLEEAFYRAEYLERAAEIQL 184 (184)
T ss_dssp HHHHHHHHHTC--TSSEEEETTTEEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhcC--CceEEeecCCceEEEeCCHHHHHHHHHHHHHHHHHhC
Confidence 99999999982 3699999999999999999999999999999999986
No 32
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=100.00 E-value=8.4e-33 Score=264.70 Aligned_cols=218 Identities=43% Similarity=0.740 Sum_probs=186.9
Q ss_pred ceEEEEeccccccccccccccchhhHHhhHHhhhhhhcCChhhHHHHHHHHHHhHHhhhhccCCccCCCCCCCchHHHHH
Q 009774 284 PRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEEVIA 363 (526)
Q Consensus 284 ikaVlFD~DGTL~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (526)
+++|+||+.||+++.+|+++.+|||+++++..|+..+|..+ .++.++... .. ... +
T Consensus 1 ~~~~l~diegt~~~isfv~~~lfpy~~~~~~~~l~~~~~~~----~~~~~~~~~---------------~~-~~~----~ 56 (220)
T TIGR01691 1 IKNVLLDIEGTTGSISFVHDVLFPYAASRLESFVNDNYEST----IVENLRELG---------------KT-PEE----L 56 (220)
T ss_pred CCEEEEecCCCcccHHHHHhhhhHHHHHHHHHHHHHhCCCH----HHHHHHHhc---------------cC-CcH----H
Confidence 68999999999999999999999999999999999888655 344444321 10 111 4
Q ss_pred HHHHHHHHHHhhhhcchhhHhhhHHHHHHhhhcccccCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCC
Q 009774 364 ALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGD 443 (526)
Q Consensus 364 ~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~y~~~~~~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~g 443 (526)
.+..++..|+..+++.+.+|++++..|+++|.....+.++|||+.++|++|+++|++++|+||++...++..+++...++
T Consensus 57 ~~~~~~~~~~~~d~k~~~lk~lqg~iw~~~Y~~~~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~ 136 (220)
T TIGR01691 57 ILLRKLHAEMDKDRKATPLKTLQGLIWRQGYESGELTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGN 136 (220)
T ss_pred HHHHHHHHHHHcCCCcchHHHHHHHHHHHHHhcCCcccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccc
Confidence 56666777999999999999999999999999888888999999999999999999999999999999998888875557
Q ss_pred cccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCC-CC-CeEec
Q 009774 444 LRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPEN-HG-FKTIN 521 (526)
Q Consensus 444 l~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~-~~-~~~i~ 521 (526)
+.++|+.+++...+.||+|++|.++++++|++ |++|+||||+..|+++|+++||.++++.|+++.+..+. .+ +..|+
T Consensus 137 L~~~f~~~fd~~~g~KP~p~~y~~i~~~lgv~-p~e~lfVgDs~~Di~AA~~AG~~ti~v~r~g~~~~~~~~~~~~~~~~ 215 (220)
T TIGR01691 137 LTPYFSGYFDTTVGLKTEAQSYVKIAGQLGSP-PREILFLSDIINELDAARKAGLHTGQLVRPGNDPVVDPSFPVYPQFP 215 (220)
T ss_pred hhhhcceEEEeCcccCCCHHHHHHHHHHhCcC-hhHEEEEeCCHHHHHHHHHcCCEEEEEECCCCCCCCcccCCCCCeec
Confidence 88899999876667899999999999999997 99999999999999999999999999999976543332 22 78899
Q ss_pred CCCCC
Q 009774 522 SFAEI 526 (526)
Q Consensus 522 ~l~eL 526 (526)
||+++
T Consensus 216 ~~~~~ 220 (220)
T TIGR01691 216 DLNAV 220 (220)
T ss_pred CcccC
Confidence 99874
No 33
>KOG2631 consensus Class II aldolase/adducin N-terminal domain protein [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.7e-32 Score=246.40 Aligned_cols=210 Identities=58% Similarity=1.001 Sum_probs=192.8
Q ss_pred HHhhccHHHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCC
Q 009774 21 YLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSP 100 (526)
Q Consensus 21 ~~~~~~~~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~ 100 (526)
++.+++.+..+.-+.++||.+|..||+.|+||-||+|.++ .++|.|||+.++.++|+|++++|+.++.++.+
T Consensus 11 ~i~~~~~~~p~~Li~eLc~qFY~lgWvtGTGgai~ik~~~--------ei~iaPSgVQKErm~peDlfv~~~~~~~~~~P 82 (238)
T KOG2631|consen 11 RIGSMDLEHPRNLICELCRQFYHLGWVTGTGGAISIKHGD--------EIYIAPSGVQKERMQPEDLFVMDLNTEYISVP 82 (238)
T ss_pred cccCCCccchHHHHHHHHHHHHhcCceeccCCeEEEeeCC--------eeEeCcchhhhhhCCccceEEEecCCceeccC
Confidence 5778888999999999999999999999999999999988 69999999999999999999999999777643
Q ss_pred CCCCCCCCCCCCCCchHHHHHHHHhcCcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcC--Cc----ccCccce
Q 009774 101 SPKPYPHKPPKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKG--HG----YYDELVV 174 (526)
Q Consensus 101 ~~~p~~~~p~~~S~E~~lH~~iy~~~dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g--~~----~~~~~~v 174 (526)
+..+++++|..+++...+|..|+++||||||+..|+..+++.. ...+.+++.||++++.+ .+ |++...|
T Consensus 83 ----~~~k~~k~s~CtpLF~~~y~~r~AgAvIHTHS~~Avl~t~L~~-~~~F~ith~EmIKgI~~~~~g~~~~y~D~L~v 157 (238)
T KOG2631|consen 83 ----KPSKKLKPSQCTPLFMAAYTMRDAGAVIHTHSQAAVLATLLFP-SDEFRITHQEMIKGIPKGNSGGYLPYFDTLVV 157 (238)
T ss_pred ----CCcCCCCccccHHHHHHHHHhcCCceEEEeccHHHHHHHhhcc-cceeEeehHHHHhcCCCCCCCccccccceEEE
Confidence 3345667799999999999999999999999999999999875 46889999999998865 33 7777889
Q ss_pred eeecCCCCchHHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 009774 175 PIIENTAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLD 243 (526)
Q Consensus 175 pv~~~~~~~~~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~ 243 (526)
|++++.|...+|.+.+.+++..+|+.-+||.||||+++||+|.+.|--.+|..|...++++....+|-+
T Consensus 158 PIIeNt~~E~~L~D~l~~aie~YP~tcAVLVR~HGvyvWG~TWekaKt~~EcydYLfelaikm~klgip 226 (238)
T KOG2631|consen 158 PIIENTPSESDLKDSLKKAIELYPDTCAVLVRRHGVYVWGPTWEKAKTMTECYDYLFELAIKMKKLGIP 226 (238)
T ss_pred eeecCCchHHHHHHHHHHHHHhCCcceEEEEecCcEEEecCcHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999977
No 34
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=99.96 E-value=9.5e-28 Score=212.43 Aligned_cols=222 Identities=43% Similarity=0.761 Sum_probs=200.8
Q ss_pred CceEEEEeccccccccccccccchhhHHhhHHhhhhhhcCChhhHHHHHHHHHHhHHhhhhccCCccCCCCCCCchHHHH
Q 009774 283 FPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEEVI 362 (526)
Q Consensus 283 ~ikaVlFD~DGTL~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (526)
|+|+|+.|+.||....+|+.+.+|||+.+.+.+|+.+++..+++..++......+.. ....
T Consensus 3 m~kaiLlDIEGTv~~iSFVkdvlFPYa~~~lp~fv~e~~e~~~v~~~v~~v~~e~g~---------------~~s~---- 63 (229)
T COG4229 3 MVKAILLDIEGTVSPISFVKDVLFPYAARKLPDFVRENTEDSEVKKIVDEVLSEFGI---------------ANSE---- 63 (229)
T ss_pred chhhheeeccccccchhHHHhhhhHHHHHHhHHHHHhhccCChhhHHHHHHHHHhCc---------------cchH----
Confidence 569999999999999999999999999999999999999988877777776665321 1113
Q ss_pred HHHHHHHHHHHhhhhcchhhHhhhHHHHHHhhhcccccCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCC
Q 009774 363 AALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYG 442 (526)
Q Consensus 363 ~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~y~~~~~~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~ 442 (526)
+.+...+..|+..+.+.+.+|++++..|..+|+......++||++.+.|+++++.|.+++|.|+++...+...+.+...+
T Consensus 64 E~lva~~~~wiaed~K~t~lK~lQG~iWa~Gy~sgelkahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~ag 143 (229)
T COG4229 64 EALVALLLEWIAEDSKDTPLKALQGMIWAHGYESGELKAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAG 143 (229)
T ss_pred HHHHHHHHHHHhcccccchHHHHHhHHHHhccccCccccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccc
Confidence 44555555689999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred CcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecC
Q 009774 443 DLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINS 522 (526)
Q Consensus 443 gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~ 522 (526)
+|..+|+.+||+..+.|.....|.+++..+|++ |.+++|+.|.+..+++|+.+||.++.+.|+|+.+..+..++.+++|
T Consensus 144 dL~~lfsGyfDttiG~KrE~~SY~kIa~~iGl~-p~eilFLSDn~~EL~AA~~vGl~t~l~~R~g~~P~~d~~~~~~~~s 222 (229)
T COG4229 144 DLNSLFSGYFDTTIGKKRESQSYAKIAGDIGLP-PAEILFLSDNPEELKAAAGVGLATGLAVRPGNAPVPDGQGFLVYKS 222 (229)
T ss_pred cHHhhhcceeeccccccccchhHHHHHHhcCCC-chheEEecCCHHHHHHHHhcchheeeeecCCCCCCCCCcCceeeec
Confidence 999999999999889999999999999999996 9999999999999999999999999999998888877667888888
Q ss_pred CC
Q 009774 523 FA 524 (526)
Q Consensus 523 l~ 524 (526)
|.
T Consensus 223 f~ 224 (229)
T COG4229 223 FE 224 (229)
T ss_pred hh
Confidence 76
No 35
>PRK08324 short chain dehydrogenase; Validated
Probab=99.95 E-value=2.4e-28 Score=272.75 Aligned_cols=198 Identities=17% Similarity=0.132 Sum_probs=152.1
Q ss_pred HHHHHHHHHHHHHHHHcCCccccCCceEEEeCCCCC-CCCccEEEEeccCCCCCCCCCCCEEEEeCCC------------
Q 009774 28 KETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSI-PKPQQLILMSPSGVQKERMEPEDMYVLSGNG------------ 94 (526)
Q Consensus 28 ~~~r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~~~-~~~~~~~litpsG~~~~~l~~~div~vd~dg------------ 94 (526)
+++++.+....+...+.||+.+++||+|+|+.+.++ ..+.+.|||||||.++++|+++||+.||+++
T Consensus 14 ~~~~~~v~~~~~l~~~~~l~~~~gGN~S~k~~~~~~~g~~~~~~~it~SG~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~ 93 (681)
T PRK08324 14 DELALLVYRSRLLGADPRLVNHGGGNTSVKTTETDLTGEPVEVLWVKGSGGDLATITAAGFAALRLDPLRALKELGVLSD 93 (681)
T ss_pred cHHHHHHHHHHHhCCCHHHhccCCceeeeeeeccccCCCeeeEEEEECCccChhhccccCCCeeeHHHHHhhhccCCcch
Confidence 456666666666667777999999999999854211 1123479999999999999999999999874
Q ss_pred ----------CcccCCCCCCCCCCCCCCCCchHHHHHHHHhcCcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhc
Q 009774 95 ----------TTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIK 164 (526)
Q Consensus 95 ----------~~~~g~~~~p~~~~p~~~S~E~~lH~~iy~~~dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~ 164 (526)
....+. . +||+|+.||+.||+ ++|+||||+|++++|++... +++... . ++
T Consensus 94 ~~~~~~~~~~~~~~~~-~--------~pS~e~~lH~~i~~----~~V~HtH~~~~~a~s~~~~~---~~~~~~-~---~~ 153 (681)
T PRK08324 94 DEMVAYLRHCLFDPNA-P--------APSIETLLHAFLPF----KHVDHTHPDAIIAIANAPDG---EELTRE-I---FG 153 (681)
T ss_pred HHHHHHHHhhccCCCC-C--------CCchhHHHHhhcCC----CEEEecCchHHHHHHcCCCH---HHHHHH-H---cC
Confidence 222221 2 33999999999986 56999999999999998632 222111 1 22
Q ss_pred CCcccCccceeeecCC-CCchHHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhC--C
Q 009774 165 GHGYYDELVVPIIENT-AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQL--G 241 (526)
Q Consensus 165 g~~~~~~~~vpv~~~~-~~~~~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~--g 241 (526)
+ .|+++||. |+ .++++.+.+.++..++.+++||+|||+++||+|+.+||.+++.+|++|++++.+++. |
T Consensus 154 ~-------~v~~~py~~pg-~~l~~~~~~~~~~~~~~~~~lL~nHG~~~~G~~~~eA~~~~~~~e~~a~~~~~a~~~~~g 225 (681)
T PRK08324 154 D-------RVGWVPYVRPG-FDLALAIAEAVRANPGAEGVVLGKHGLFTWGDTAKEAYERTIEIITRAEEYIEARGAGFG 225 (681)
T ss_pred C-------ceEEcCccCCC-hHHHHHHHHHHHhCCCCcEEEECCCCCeeccCCHHHHHHHHHHHHHHHHHHHHHhccccC
Confidence 2 39999996 55 789999999998876789999999999999999999999999999999999999987 5
Q ss_pred CCC-CCCCCCccc
Q 009774 242 LDW-STPNHGPTR 253 (526)
Q Consensus 242 ~~~-~~~~~~~~~ 253 (526)
++. ...++++.+
T Consensus 226 ~~~~~~l~~~~~~ 238 (681)
T PRK08324 226 GAVYEALPAPERR 238 (681)
T ss_pred CccccCCCchhHH
Confidence 543 233343443
No 36
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=99.95 E-value=3.9e-27 Score=231.57 Aligned_cols=122 Identities=16% Similarity=0.157 Sum_probs=109.5
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 477 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p 477 (526)
...++||+.++|+.|+++|++++|+||++...++..++++ ++.++|+.++ ++....||+|++|++++++++++ |
T Consensus 106 ~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~---gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~-~ 181 (248)
T PLN02770 106 QLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLL---GLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVS-K 181 (248)
T ss_pred cCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHc---CChhhCcEEEecCcCCCCCCChHHHHHHHHHhCCC-h
Confidence 4579999999999999999999999999999999999999 9999999988 55677899999999999999997 9
Q ss_pred CcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCC-CCCCCeEecCCCC
Q 009774 478 SEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLP-ENHGFKTINSFAE 525 (526)
Q Consensus 478 ~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~-~~~~~~~i~~l~e 525 (526)
++|+||||+..|+++|+++|+.+|++.++.....+ ...++++++++.|
T Consensus 182 ~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~~e 230 (248)
T PLN02770 182 DHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDYED 230 (248)
T ss_pred hHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccchh
Confidence 99999999999999999999999999987433322 2345899999876
No 37
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=99.95 E-value=1.1e-27 Score=266.33 Aligned_cols=184 Identities=17% Similarity=0.096 Sum_probs=148.7
Q ss_pred HHHHHHHHHHHHHcCCccccCCceEEEeCCC-CC-CCCccEEEEeccCCCCCCCCCCCEEEEeCCC--------------
Q 009774 31 RVLISELCRHFYTLGWVSGTGGSITIKVHDD-SI-PKPQQLILMSPSGVQKERMEPEDMYVLSGNG-------------- 94 (526)
Q Consensus 31 r~~l~~~~r~l~~~gl~~~~~GNiSvR~~~~-~~-~~~~~~~litpsG~~~~~l~~~div~vd~dg-------------- 94 (526)
++.+...+++.+++||+.+++||+|+|+.++ |+ ..+.+.|||||||.++++|+++||+.||+++
T Consensus 2 ~~~v~~s~~~g~~~~l~~~~gGN~Svk~~~~~~~~g~~~~~~~I~~SG~~~~~l~~~~~~~v~l~~~~~~~~~~~~~~~~ 81 (676)
T TIGR02632 2 AELVYRSNLLGADRRITNYGGGNTSAKTTETDPLTGGEVEVMWVKGSGGDLGTMTAANFAGLRLDKLRPLKERYPGVETE 81 (676)
T ss_pred HHHHHHHHHhCCCHHHhccCCccceeeccccCCCcCceeeEEEEECCccCHhhccccCCceEechHHHHHhhhccccCCH
Confidence 5678888899999999999999999998652 11 0111269999999999999999999999985
Q ss_pred ----------CcccCCCCCCCCCCCCCCCCchHHHHHHHHhcCcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhc
Q 009774 95 ----------TTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIK 164 (526)
Q Consensus 95 ----------~~~~g~~~~p~~~~p~~~S~E~~lH~~iy~~~dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~ 164 (526)
.+.++. .+ ||+|+.||+.||. ++|.||||++++++++.... .+ +.+.+.
T Consensus 82 ~~~v~~~~~~~~~~~~-~~--------PS~Et~lH~~i~~----~~v~HtH~~~~~a~a~~~~~---~~-----~~~~~~ 140 (676)
T TIGR02632 82 DEMVAYLPHCLFNLNG-RA--------PSIDTPLHAFVPF----KHVDHMHPDAIIALACAENG---RE-----LTEEIF 140 (676)
T ss_pred HHHHHHHHhcccCCCC-CC--------CCccHHHHhhccc----ceEEecCchHHHHHhcCccH---HH-----HHHHHc
Confidence 223332 23 3999999999975 56889999999999987531 22 222222
Q ss_pred CCcccCccceeeecCC-CCchHHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 009774 165 GHGYYDELVVPIIENT-AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGL 242 (526)
Q Consensus 165 g~~~~~~~~vpv~~~~-~~~~~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~ 242 (526)
|. .|+++||. |+ .+|++.+.+.++.+++.++|||+|||+++||+|+++|+.+++.+|+.|++++.+..+|.
T Consensus 141 g~------~v~~vpy~~pG-~~La~~~~~~~~~~~~~~~vll~~HGl~~~G~~~~eA~~~~~~~e~~a~~~~~~~~~g~ 212 (676)
T TIGR02632 141 GD------EVVWVPWRRPG-FQLGLDIAAQVDANPQAKGVVLEGHGLVVWGDTAKECYERTLSIINEAEQFIEEKRGGE 212 (676)
T ss_pred CC------eEEEeccccCC-hHHHHHHHHHHHhCCCCcEEEEcCCCeEEecCCHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 21 38999996 55 57999999999877667899999999999999999999999999999999999999876
No 38
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=99.94 E-value=2.7e-26 Score=221.51 Aligned_cols=123 Identities=27% Similarity=0.309 Sum_probs=111.5
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 477 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p 477 (526)
...+|||+.++|..|+++|++++|+||++....+..++++ |+.++|+.++ ++....||+|..+..++++++++ |
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~---gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~-~ 162 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKAL---GLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLD-P 162 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHh---CCccccceEEcCCCCCCCCcCHHHHHHHHHHhCCC-h
Confidence 4579999999999999999999999999999999999999 9999999999 55788999999999999999998 9
Q ss_pred CcEEEEecCHhhHHHHHHcCCcEEEEeCCCC-CCCCCC-CCCeEecCCCCC
Q 009774 478 SEILFVTDVYQEATAAKAAGLEVVISIRPGN-GPLPEN-HGFKTINSFAEI 526 (526)
Q Consensus 478 ~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~-~~~~~~-~~~~~i~~l~eL 526 (526)
++++||||+.+|+.+|++||+.+|++.|+.. ...... .++.+++++.||
T Consensus 163 ~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el 213 (220)
T COG0546 163 EEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAEL 213 (220)
T ss_pred hheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHH
Confidence 9999999999999999999999999999853 333333 359999998774
No 39
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=99.94 E-value=1.6e-25 Score=216.18 Aligned_cols=123 Identities=19% Similarity=0.222 Sum_probs=108.3
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 477 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p 477 (526)
.+.++||+.++|+.|+++|++++|+||++...+...++++ |+..+|+.++ ++.+..||+|++|+++++++|++ |
T Consensus 92 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~---~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~-~ 167 (221)
T TIGR02253 92 YLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERL---GVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVK-P 167 (221)
T ss_pred hCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhC---ChHHhccEEEEeccCCCCCCCHHHHHHHHHHcCCC-h
Confidence 3579999999999999999999999999999999999999 9999999988 45777899999999999999997 9
Q ss_pred CcEEEEecCH-hhHHHHHHcCCcEEEEeCCCCCC-C-C-CCCCCeEecCCCCC
Q 009774 478 SEILFVTDVY-QEATAAKAAGLEVVISIRPGNGP-L-P-ENHGFKTINSFAEI 526 (526)
Q Consensus 478 ~~~l~VgDs~-~Di~~A~~aG~~~i~v~~~~~~~-~-~-~~~~~~~i~~l~eL 526 (526)
++|+||||++ +|+.+|+++|+.+|++.++.... . . ...++++|+++.||
T Consensus 168 ~~~~~igDs~~~di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~el 220 (221)
T TIGR02253 168 EEAVMVGDRLDKDIKGAKNLGMKTVWINQGKSSKMEDDVYPYPDYEISSLREL 220 (221)
T ss_pred hhEEEECCChHHHHHHHHHCCCEEEEECCCCCcccccccccCCCeeeCcHHhh
Confidence 9999999998 89999999999999999874322 1 1 22347899998875
No 40
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=99.94 E-value=7.1e-26 Score=220.03 Aligned_cols=123 Identities=20% Similarity=0.246 Sum_probs=108.0
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 477 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p 477 (526)
..+++||+.++|+.|+++|++++|+||++......+++++ ++..+|+.++ +.....||+|++|+++++++|++ |
T Consensus 93 ~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~---~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~-p 168 (229)
T PRK13226 93 QSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQL---GWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVA-P 168 (229)
T ss_pred cCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc---CchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCC-h
Confidence 3579999999999999999999999999999999999999 9999999887 34567899999999999999997 9
Q ss_pred CcEEEEecCHhhHHHHHHcCCcEEEEeCCCC-CC-CC-CCCCCeEecCCCCC
Q 009774 478 SEILFVTDVYQEATAAKAAGLEVVISIRPGN-GP-LP-ENHGFKTINSFAEI 526 (526)
Q Consensus 478 ~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~-~~-~~-~~~~~~~i~~l~eL 526 (526)
++|+||||+.+|+.+|+++|+.+|++.++.. .. .. ...++++++++.||
T Consensus 169 ~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~~~el 220 (229)
T PRK13226 169 TDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQPQLL 220 (229)
T ss_pred hhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCCHHHH
Confidence 9999999999999999999999999999832 22 22 23358999988764
No 41
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=99.94 E-value=4.6e-26 Score=219.00 Aligned_cols=123 Identities=17% Similarity=0.179 Sum_probs=109.2
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 477 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p 477 (526)
.+.++||+.++|+.|+++|++++|+||++...++.+++.+ |+.++|+.++ ++....||+|++|++++++++++ |
T Consensus 80 ~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~---gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~-~ 155 (214)
T PRK13288 80 LVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLT---GLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAK-P 155 (214)
T ss_pred hcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc---CChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCC-H
Confidence 4579999999999999999999999999999999999999 9999999998 45677899999999999999997 9
Q ss_pred CcEEEEecCHhhHHHHHHcCCcEEEEeCCC-CCCCC-CCCCCeEecCCCCC
Q 009774 478 SEILFVTDVYQEATAAKAAGLEVVISIRPG-NGPLP-ENHGFKTINSFAEI 526 (526)
Q Consensus 478 ~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~-~~~~~-~~~~~~~i~~l~eL 526 (526)
++|+||||+.+|+.+|+++|+.+|++.|+. ..... +..++++++++.|+
T Consensus 156 ~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~~~~~l 206 (214)
T PRK13288 156 EEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLDKMSDL 206 (214)
T ss_pred HHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEECCHHHH
Confidence 999999999999999999999999999983 33322 23357889988764
No 42
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=99.93 E-value=1.7e-25 Score=220.72 Aligned_cols=122 Identities=10% Similarity=0.081 Sum_probs=107.3
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 477 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p 477 (526)
..+++||+.++|+.|+++|++++|+||++...++.+++++ |+.++|+.++ ++....||+|++|+++++++|++ |
T Consensus 107 ~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~---gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~-p 182 (260)
T PLN03243 107 LYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAV---GMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFI-P 182 (260)
T ss_pred CcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHc---CCHhhCcEEEecccCCCCCCCHHHHHHHHHHhCCC-h
Confidence 3578999999999999999999999999999999999999 9999999998 45667899999999999999997 9
Q ss_pred CcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCCCC
Q 009774 478 SEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 526 (526)
Q Consensus 478 ~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL 526 (526)
++|+||||+..|+++|+++||.+|++......... ..++++++++.||
T Consensus 183 ~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l-~~ad~vi~~~~el 230 (260)
T PLN03243 183 ERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYEL-SAGDLVVRRLDDL 230 (260)
T ss_pred HHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhh-ccCCEEeCCHHHH
Confidence 99999999999999999999999999733333222 2348889888764
No 43
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=99.93 E-value=1.7e-25 Score=216.41 Aligned_cols=123 Identities=23% Similarity=0.292 Sum_probs=109.2
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 477 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p 477 (526)
...++||+.++|+.|+++|++++|+||+....++.+++.+ ++.++|+.++ +.....||+|++|+.+++++|++ |
T Consensus 90 ~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~-~ 165 (222)
T PRK10826 90 TRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMF---DLRDYFDALASAEKLPYSKPHPEVYLNCAAKLGVD-P 165 (222)
T ss_pred CCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhC---cchhcccEEEEcccCCCCCCCHHHHHHHHHHcCCC-H
Confidence 4579999999999999999999999999999999999999 9999999998 45677899999999999999997 9
Q ss_pred CcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCC-CCCCCeEecCCCCC
Q 009774 478 SEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLP-ENHGFKTINSFAEI 526 (526)
Q Consensus 478 ~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~-~~~~~~~i~~l~eL 526 (526)
++|+||||+.+|+.+|+++|+++|++.++...... ...++.+++|+.||
T Consensus 166 ~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~dl 215 (222)
T PRK10826 166 LTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLESLTEL 215 (222)
T ss_pred HHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccCHHHH
Confidence 99999999999999999999999999987544322 22348888888764
No 44
>PRK11587 putative phosphatase; Provisional
Probab=99.93 E-value=1.9e-25 Score=215.45 Aligned_cols=121 Identities=21% Similarity=0.213 Sum_probs=103.8
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 477 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p 477 (526)
.+.++||+.++|+.|+++|++++|+||++.......++.. ++ .+|+.++ +.....||+|++|..+++++|++ |
T Consensus 81 ~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~---~l-~~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~-p 155 (218)
T PRK11587 81 GITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAA---GL-PAPEVFVTAERVKRGKPEPDAYLLGAQLLGLA-P 155 (218)
T ss_pred CceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhc---CC-CCccEEEEHHHhcCCCCCcHHHHHHHHHcCCC-c
Confidence 4579999999999999999999999999988878888888 77 4577776 45667899999999999999997 9
Q ss_pred CcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCCCC
Q 009774 478 SEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 526 (526)
Q Consensus 478 ~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL 526 (526)
++|+||||+..|+++|+++||.+|++.++..... ...++.+++++.||
T Consensus 156 ~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~-~~~~~~~~~~~~el 203 (218)
T PRK11587 156 QECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPR-LDEVDLVLHSLEQL 203 (218)
T ss_pred ccEEEEecchhhhHHHHHCCCEEEEECCCCchhh-hccCCEEecchhhe
Confidence 9999999999999999999999999987643222 22348899998875
No 45
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=99.93 E-value=1.7e-25 Score=220.76 Aligned_cols=104 Identities=17% Similarity=0.126 Sum_probs=96.9
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCccccc-ceEE--eCCcCCCCCHHHHHHHHHHcCC-C
Q 009774 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL-SGFF--DTAVGNKRETPSYVEITNSLGV-D 475 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~f-d~i~--~~~~~~KP~p~~~~~~~~~l~~-~ 475 (526)
...++||+.++|+.|+++|++++|+||++...++.+++++ |+.++| |.++ ++....||+|++|.++++++|+ +
T Consensus 97 ~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~---gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~ 173 (253)
T TIGR01422 97 YSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEA---ALQGYRPDYNVTTDDVPAGRPAPWMALKNAIELGVYD 173 (253)
T ss_pred cCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHH---HhcCCCCceEEccccCCCCCCCHHHHHHHHHHcCCCC
Confidence 4689999999999999999999999999999999999999 999986 8877 4567789999999999999999 4
Q ss_pred CCCcEEEEecCHhhHHHHHHcCCcEEEEeCCC
Q 009774 476 KPSEILFVTDVYQEATAAKAAGLEVVISIRPG 507 (526)
Q Consensus 476 ~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~ 507 (526)
|++|+||||+++|+.+|+++||.+|+|.++.
T Consensus 174 -~~~~l~IGDs~~Di~aA~~aGi~~i~v~~g~ 204 (253)
T TIGR01422 174 -VAACVKVGDTVPDIEEGRNAGMWTVGLILSS 204 (253)
T ss_pred -chheEEECCcHHHHHHHHHCCCeEEEEecCC
Confidence 9999999999999999999999999999884
No 46
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=99.93 E-value=7.6e-25 Score=207.93 Aligned_cols=106 Identities=25% Similarity=0.346 Sum_probs=99.3
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 477 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p 477 (526)
...++||+.++|++|+++|++++|+||++...++.+++++ |+.++||.++ ++.+..||+|++|+++++++|++ |
T Consensus 90 ~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~---gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~-p 165 (198)
T TIGR01428 90 RLPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHA---GLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVP-P 165 (198)
T ss_pred cCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHC---CChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCC-h
Confidence 3479999999999999999999999999999999999999 9999999998 45777899999999999999997 9
Q ss_pred CcEEEEecCHhhHHHHHHcCCcEEEEeCCCCC
Q 009774 478 SEILFVTDVYQEATAAKAAGLEVVISIRPGNG 509 (526)
Q Consensus 478 ~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~ 509 (526)
++|+||||+..|+.+|+++||++||+++++.+
T Consensus 166 ~~~~~vgD~~~Di~~A~~~G~~~i~v~r~~~~ 197 (198)
T TIGR01428 166 DEVLFVASNPWDLGGAKKFGFKTAWVNRPGEP 197 (198)
T ss_pred hhEEEEeCCHHHHHHHHHCCCcEEEecCCCCC
Confidence 99999999999999999999999999997654
No 47
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=99.93 E-value=4e-25 Score=212.08 Aligned_cols=123 Identities=22% Similarity=0.257 Sum_probs=108.8
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 477 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p 477 (526)
...++||+.++|+.|+++|++++|+||++...++.+++++ ++.++|+.++ ++....||+|++|.+++++++++ |
T Consensus 83 ~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~-~ 158 (213)
T TIGR01449 83 LTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELL---GLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVA-P 158 (213)
T ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc---CcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCC-h
Confidence 4579999999999999999999999999999999999999 9999999988 44667899999999999999997 9
Q ss_pred CcEEEEecCHhhHHHHHHcCCcEEEEeCCC-CCCCCC-CCCCeEecCCCCC
Q 009774 478 SEILFVTDVYQEATAAKAAGLEVVISIRPG-NGPLPE-NHGFKTINSFAEI 526 (526)
Q Consensus 478 ~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~-~~~~~~-~~~~~~i~~l~eL 526 (526)
++|+||||+.+|+.+|+++|+.+|++.++. ...... ..++++++++.||
T Consensus 159 ~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~~~~l 209 (213)
T TIGR01449 159 QQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDSLNEL 209 (213)
T ss_pred hHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCCHHHH
Confidence 999999999999999999999999999873 332332 3358899988764
No 48
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=99.93 E-value=4.1e-25 Score=225.61 Aligned_cols=122 Identities=12% Similarity=0.093 Sum_probs=108.4
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 477 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p 477 (526)
...++||+.++|+.|+++|++++|+||++...++.+++++ |+.+||+.++ ++....||+|++|+++++++|++ |
T Consensus 214 ~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~l---gL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~-P 289 (381)
T PLN02575 214 IYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSI---GIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFI-P 289 (381)
T ss_pred CCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc---CCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCC-c
Confidence 3579999999999999999999999999999999999999 9999999998 45667899999999999999997 9
Q ss_pred CcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCCCC
Q 009774 478 SEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 526 (526)
Q Consensus 478 ~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL 526 (526)
++|+||||+..|+++|+++||.+|++.++...... ..++++|+++.||
T Consensus 290 eecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l-~~Ad~iI~s~~EL 337 (381)
T PLN02575 290 ERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYEL-GAADLVVRRLDEL 337 (381)
T ss_pred ccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHh-cCCCEEECCHHHH
Confidence 99999999999999999999999999875322222 2347889998774
No 49
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=99.93 E-value=8.3e-25 Score=217.52 Aligned_cols=106 Identities=17% Similarity=0.109 Sum_probs=96.0
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCccccc-ceEE--eCCcCCCCCHHHHHHHHHHcCCCC
Q 009774 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL-SGFF--DTAVGNKRETPSYVEITNSLGVDK 476 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~f-d~i~--~~~~~~KP~p~~~~~~~~~l~~~~ 476 (526)
.+.++||+.++|+.|+++|++++|+||++...+..+++.+ ++.++| +.++ ++....||+|++|+.+++++|+.+
T Consensus 99 ~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~---~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~ 175 (267)
T PRK13478 99 YATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLA---AAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYD 175 (267)
T ss_pred cCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHH---hhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCC
Confidence 4579999999999999999999999999999999999998 788875 7777 456778999999999999999952
Q ss_pred CCcEEEEecCHhhHHHHHHcCCcEEEEeCCCC
Q 009774 477 PSEILFVTDVYQEATAAKAAGLEVVISIRPGN 508 (526)
Q Consensus 477 p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~ 508 (526)
|++|+||||+++|+++|+++|+.+|+|.++..
T Consensus 176 ~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~ 207 (267)
T PRK13478 176 VAACVKVDDTVPGIEEGLNAGMWTVGVILSGN 207 (267)
T ss_pred CcceEEEcCcHHHHHHHHHCCCEEEEEccCcc
Confidence 69999999999999999999999999998843
No 50
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=99.93 E-value=9.2e-25 Score=210.81 Aligned_cols=124 Identities=13% Similarity=0.125 Sum_probs=107.1
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcc--cccceEE--eCCcCCCCCHHHHHHHHHHcCCC
Q 009774 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLR--KYLSGFF--DTAVGNKRETPSYVEITNSLGVD 475 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~--~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~ 475 (526)
..+++||+.++|+.|+++|++++|+||++...++.+++++ ++. .+|+.++ ++....||+|++|+++++++++.
T Consensus 85 ~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~---~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~ 161 (220)
T TIGR03351 85 PPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKL---GWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQ 161 (220)
T ss_pred CCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHh---hhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCC
Confidence 3579999999999999999999999999999999999999 998 9999998 44667899999999999999994
Q ss_pred CCCcEEEEecCHhhHHHHHHcCCcE-EEEeCCC-CCCCCC-CCCCeEecCCCCC
Q 009774 476 KPSEILFVTDVYQEATAAKAAGLEV-VISIRPG-NGPLPE-NHGFKTINSFAEI 526 (526)
Q Consensus 476 ~p~~~l~VgDs~~Di~~A~~aG~~~-i~v~~~~-~~~~~~-~~~~~~i~~l~eL 526 (526)
+|++|+||||++.|+++|+++||.+ |++.++. +..... ..++.+++++.||
T Consensus 162 ~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~~~~~l 215 (220)
T TIGR03351 162 DVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLDSVADL 215 (220)
T ss_pred ChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeecCHHHH
Confidence 2699999999999999999999999 8998873 333332 2347888887654
No 51
>PRK09449 dUMP phosphatase; Provisional
Probab=99.92 E-value=4.6e-24 Score=206.49 Aligned_cols=122 Identities=16% Similarity=0.169 Sum_probs=105.1
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS 478 (526)
Q Consensus 401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p~ 478 (526)
..++||+.++|+.|+ +|++++|+||++...++..++++ |+.++||.++ ++.+..||+|++|.++++++|+.+++
T Consensus 94 ~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~---~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~ 169 (224)
T PRK09449 94 CTPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERT---GLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRS 169 (224)
T ss_pred CccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhC---ChHHHcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcc
Confidence 579999999999999 57999999999999999999999 9999999998 45677899999999999999985258
Q ss_pred cEEEEecCH-hhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCCCC
Q 009774 479 EILFVTDVY-QEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 526 (526)
Q Consensus 479 ~~l~VgDs~-~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL 526 (526)
+|+||||+. +|+.+|+++||.+|++.+++........++++|+++.||
T Consensus 170 ~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~~~el 218 (224)
T PRK09449 170 RVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSSLSEL 218 (224)
T ss_pred cEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECCHHHH
Confidence 999999998 699999999999999987543322222458899988764
No 52
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=99.92 E-value=1.1e-24 Score=208.12 Aligned_cols=123 Identities=22% Similarity=0.212 Sum_probs=109.3
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 477 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p 477 (526)
.++++||+.++|++|+++|++++|+||++...++..++++ |+.++|+.++ ++....||+|++|++++++++++ |
T Consensus 73 ~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~---~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~-~ 148 (205)
T TIGR01454 73 EVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEAL---GLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVP-P 148 (205)
T ss_pred ccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHc---CChhheeeEEecCcCCCCCCChHHHHHHHHHcCCC-h
Confidence 4689999999999999999999999999999999999999 9999999988 44667899999999999999997 9
Q ss_pred CcEEEEecCHhhHHHHHHcCCcEEEEeCC-CCCCCCC-CCCCeEecCCCCC
Q 009774 478 SEILFVTDVYQEATAAKAAGLEVVISIRP-GNGPLPE-NHGFKTINSFAEI 526 (526)
Q Consensus 478 ~~~l~VgDs~~Di~~A~~aG~~~i~v~~~-~~~~~~~-~~~~~~i~~l~eL 526 (526)
++|+||||+..|+.+|+++||++|++.|+ ++..... ..++++++++.||
T Consensus 149 ~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~~~~l 199 (205)
T TIGR01454 149 EDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRKPQSL 199 (205)
T ss_pred hheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCCHHHH
Confidence 99999999999999999999999999998 4443332 3348889888664
No 53
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=99.92 E-value=2.7e-24 Score=214.00 Aligned_cols=123 Identities=22% Similarity=0.273 Sum_probs=108.3
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 477 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p 477 (526)
...++||+.++|+.|+++|++++|+||++...++..++.+ ++..+|+.++ ++....||+|++|+.+++++|++ |
T Consensus 99 ~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~---~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~-~ 174 (272)
T PRK13223 99 LTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQM---KIGRYFRWIIGGDTLPQKKPDPAALLFVMKMAGVP-P 174 (272)
T ss_pred CCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHc---CcHhhCeEEEecCCCCCCCCCcHHHHHHHHHhCCC-h
Confidence 4579999999999999999999999999999999999999 9999999888 44667899999999999999997 9
Q ss_pred CcEEEEecCHhhHHHHHHcCCcEEEEeCCCC-CCCC-CCCCCeEecCCCCC
Q 009774 478 SEILFVTDVYQEATAAKAAGLEVVISIRPGN-GPLP-ENHGFKTINSFAEI 526 (526)
Q Consensus 478 ~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~-~~~~-~~~~~~~i~~l~eL 526 (526)
++|+||||+.+|+++|+++||+++++.++.. .... ...++++++++.||
T Consensus 175 ~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~~l~el 225 (272)
T PRK13223 175 SQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVIDDLRAL 225 (272)
T ss_pred hHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEECCHHHH
Confidence 9999999999999999999999999999733 2222 23458899988764
No 54
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=99.92 E-value=2.3e-24 Score=208.50 Aligned_cols=103 Identities=16% Similarity=0.190 Sum_probs=95.5
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 477 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p 477 (526)
...++||+.++|+.|+++|++++|+||++...++..++++ |+.++|+.++ ++....||+|++|+++++++|++ |
T Consensus 91 ~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~---~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~-p 166 (224)
T PRK14988 91 RAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHT---GLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLK-A 166 (224)
T ss_pred cCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHC---CcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCC-h
Confidence 4579999999999999999999999999999999999999 9999999998 45677899999999999999997 9
Q ss_pred CcEEEEecCHhhHHHHHHcCCcE-EEEeCC
Q 009774 478 SEILFVTDVYQEATAAKAAGLEV-VISIRP 506 (526)
Q Consensus 478 ~~~l~VgDs~~Di~~A~~aG~~~-i~v~~~ 506 (526)
++|+||||++.|+++|+++||.+ +++..+
T Consensus 167 ~~~l~igDs~~di~aA~~aG~~~~~~v~~~ 196 (224)
T PRK14988 167 ERTLFIDDSEPILDAAAQFGIRYCLGVTNP 196 (224)
T ss_pred HHEEEEcCCHHHHHHHHHcCCeEEEEEeCC
Confidence 99999999999999999999985 667665
No 55
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=99.92 E-value=2.2e-24 Score=208.00 Aligned_cols=105 Identities=29% Similarity=0.296 Sum_probs=98.7
Q ss_pred cccCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCC
Q 009774 398 ELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVD 475 (526)
Q Consensus 398 ~~~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~ 475 (526)
....+++||+.++|+.|+++|++++++||+++......++.+ |+.++|+.++ +++...||+|++|++++++||++
T Consensus 82 ~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~---gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~ 158 (221)
T COG0637 82 LEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARL---GLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVD 158 (221)
T ss_pred hcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHc---cChhhcchhccHHHHhcCCCCCHHHHHHHHHcCCC
Confidence 345689999999999999999999999999999999999999 9999999988 56777799999999999999998
Q ss_pred CCCcEEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774 476 KPSEILFVTDVYQEATAAKAAGLEVVISIRP 506 (526)
Q Consensus 476 ~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~ 506 (526)
|++||.|+||+.++.+|++|||.+|++..+
T Consensus 159 -P~~CvviEDs~~Gi~Aa~aAGm~vv~v~~~ 188 (221)
T COG0637 159 -PEECVVVEDSPAGIQAAKAAGMRVVGVPAG 188 (221)
T ss_pred -hHHeEEEecchhHHHHHHHCCCEEEEecCC
Confidence 999999999999999999999999999985
No 56
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=99.92 E-value=2.2e-23 Score=201.42 Aligned_cols=122 Identities=17% Similarity=0.214 Sum_probs=107.7
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHc-CCCC
Q 009774 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSL-GVDK 476 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l-~~~~ 476 (526)
.++++||+.++|+.|+++ ++++|+||++...++.+++.+ ++..+||.++ ++.+..||+|++|+++++++ +++
T Consensus 95 ~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~---~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~- 169 (224)
T TIGR02254 95 GHQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKS---GLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFS- 169 (224)
T ss_pred cCeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHC---CcHhhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCC-
Confidence 357999999999999999 999999999999999999999 9999999998 44677899999999999999 997
Q ss_pred CCcEEEEecCH-hhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCCCC
Q 009774 477 PSEILFVTDVY-QEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 526 (526)
Q Consensus 477 p~~~l~VgDs~-~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL 526 (526)
|++|+||||+. .|+.+|+++||.+|++++++........++++++++.||
T Consensus 170 ~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~el 220 (224)
T TIGR02254 170 KEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIRSLEEL 220 (224)
T ss_pred chheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEECCHHHH
Confidence 99999999998 799999999999999998744322233447889998764
No 57
>PLN02940 riboflavin kinase
Probab=99.91 E-value=5e-24 Score=221.44 Aligned_cols=123 Identities=20% Similarity=0.241 Sum_probs=108.0
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHh-hcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCC
Q 009774 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFG-NSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDK 476 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~-~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~ 476 (526)
.+.++||+.++|+.|+++|++++|+||++...++..++ .+ ++.++||.++ +++...||+|++|+.++++++++
T Consensus 91 ~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~---gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~- 166 (382)
T PLN02940 91 NIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQ---GWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVE- 166 (382)
T ss_pred cCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcc---ChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCC-
Confidence 45799999999999999999999999999999888887 77 9999999998 45778899999999999999997
Q ss_pred CCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCCCC
Q 009774 477 PSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 526 (526)
Q Consensus 477 p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL 526 (526)
|++|+||||+..|+.+|+++||.+|++.++.........++..++++.||
T Consensus 167 p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~sl~el 216 (382)
T PLN02940 167 PSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVINSLLDL 216 (382)
T ss_pred hhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeCCHhHc
Confidence 99999999999999999999999999998743222223347889888775
No 58
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=99.91 E-value=9e-24 Score=206.45 Aligned_cols=117 Identities=15% Similarity=0.099 Sum_probs=99.1
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 477 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p 477 (526)
...++||+.++|+.|+++ ++++|+||++.. ++++ |+.++||.++ ++....||+|++|..+++++|++ |
T Consensus 111 ~~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~---gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~-~ 180 (238)
T PRK10748 111 RIDVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELF---GLGDYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVP-I 180 (238)
T ss_pred cCCCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHC---CcHHhhceeEecccCCcCCCcHHHHHHHHHHcCCC-h
Confidence 357999999999999975 999999998875 3667 9999999998 45677899999999999999997 9
Q ss_pred CcEEEEecCH-hhHHHHHHcCCcEEEEeCCCCC---C-CCCCCCCeEecCCCCC
Q 009774 478 SEILFVTDVY-QEATAAKAAGLEVVISIRPGNG---P-LPENHGFKTINSFAEI 526 (526)
Q Consensus 478 ~~~l~VgDs~-~Di~~A~~aG~~~i~v~~~~~~---~-~~~~~~~~~i~~l~eL 526 (526)
++|+||||++ .|+.+|+++||++||+++++.. . .....++.+|+++.||
T Consensus 181 ~~~~~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~p~~~i~~l~el 234 (238)
T PRK10748 181 GEILHVGDDLTTDVAGAIRCGMQACWINPENGDLMQTWDSRLLPHIEISRLASL 234 (238)
T ss_pred hHEEEEcCCcHHHHHHHHHCCCeEEEEcCCCccccccccccCCCCEEECCHHHH
Confidence 9999999995 9999999999999999986322 1 1113357899998774
No 59
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=99.91 E-value=1.2e-23 Score=203.58 Aligned_cols=123 Identities=24% Similarity=0.300 Sum_probs=108.3
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 477 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p 477 (526)
..+++||+.++|+.|+++|++++++||+....++.+++++ ++..+|+.++ +.....||+|++|++++++++++ |
T Consensus 91 ~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~-~ 166 (226)
T PRK13222 91 GSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEAL---GIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLD-P 166 (226)
T ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc---CCccCccEEEcCCCCCCCCcChHHHHHHHHHcCCC-h
Confidence 4579999999999999999999999999999999999999 9999999988 34567899999999999999997 9
Q ss_pred CcEEEEecCHhhHHHHHHcCCcEEEEeCCCC-CCCC-CCCCCeEecCCCCC
Q 009774 478 SEILFVTDVYQEATAAKAAGLEVVISIRPGN-GPLP-ENHGFKTINSFAEI 526 (526)
Q Consensus 478 ~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~-~~~~-~~~~~~~i~~l~eL 526 (526)
++|+||||+.+|+++|+++|+.+|++.++.. .... ...++++++++.||
T Consensus 167 ~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l 217 (226)
T PRK13222 167 EEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVIDHFAEL 217 (226)
T ss_pred hheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEECCHHHH
Confidence 9999999999999999999999999998843 2222 23458899998764
No 60
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=99.91 E-value=6.8e-24 Score=210.62 Aligned_cols=122 Identities=18% Similarity=0.165 Sum_probs=104.4
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCc
Q 009774 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE 479 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~ 479 (526)
.++++||+.++|+.|+++|++++|+||++...+..+++++ |+.++|+.++.... .+++|+.|++++++++++ |++
T Consensus 140 ~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~---gl~~~F~~vi~~~~-~~~k~~~~~~~l~~~~~~-p~~ 214 (273)
T PRK13225 140 ALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQ---GLRSLFSVVQAGTP-ILSKRRALSQLVAREGWQ-PAA 214 (273)
T ss_pred cCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc---CChhheEEEEecCC-CCCCHHHHHHHHHHhCcC-hhH
Confidence 4579999999999999999999999999999999999999 99999998873211 134578999999999997 999
Q ss_pred EEEEecCHhhHHHHHHcCCcEEEEeCCCCC-CCC-CCCCCeEecCCCCC
Q 009774 480 ILFVTDVYQEATAAKAAGLEVVISIRPGNG-PLP-ENHGFKTINSFAEI 526 (526)
Q Consensus 480 ~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~-~~~-~~~~~~~i~~l~eL 526 (526)
|+||||+..|+.+|+++||.+|++.++.+. ... ...++++|+++.||
T Consensus 215 ~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~~~~eL 263 (273)
T PRK13225 215 VMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLETPSDL 263 (273)
T ss_pred EEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEECCHHHH
Confidence 999999999999999999999999998433 222 23458999988764
No 61
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=99.91 E-value=7.7e-24 Score=204.57 Aligned_cols=119 Identities=18% Similarity=0.207 Sum_probs=98.6
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccc-eEE--eCCcCCCCCHHHHHHHHHHcCCCC
Q 009774 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLS-GFF--DTAVGNKRETPSYVEITNSLGVDK 476 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd-~i~--~~~~~~KP~p~~~~~~~~~l~~~~ 476 (526)
..+++||+.++|+.|+ ++++|+||++...++..++++ ++.++|+ .++ ++....||+|++|+.++++++++
T Consensus 86 ~~~~~~gv~~~L~~L~---~~~~ivTn~~~~~~~~~l~~~---~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~- 158 (221)
T PRK10563 86 ELEPIAGANALLESIT---VPMCVVSNGPVSKMQHSLGKT---GMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVN- 158 (221)
T ss_pred cCCcCCCHHHHHHHcC---CCEEEEeCCcHHHHHHHHHhc---ChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCC-
Confidence 4679999999999994 899999999999999999999 9999996 455 35678899999999999999997
Q ss_pred CCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCCC
Q 009774 477 PSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAE 525 (526)
Q Consensus 477 p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~e 525 (526)
|++|+||||++.|+++|+++|+.+|++..++........++.+++++.|
T Consensus 159 p~~~l~igDs~~di~aA~~aG~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 207 (221)
T PRK10563 159 VENCILVDDSSAGAQSGIAAGMEVFYFCADPHNKPIDHPLVTTFTDLAQ 207 (221)
T ss_pred HHHeEEEeCcHhhHHHHHHCCCEEEEECCCCCCcchhhhhhHHHHHHHH
Confidence 9999999999999999999999999997552222222222445666554
No 62
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=99.90 E-value=9.8e-23 Score=204.15 Aligned_cols=124 Identities=21% Similarity=0.194 Sum_probs=102.6
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE-eCCcCCCCCHHHHHHHHHHcCCCCCCc
Q 009774 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF-DTAVGNKRETPSYVEITNSLGVDKPSE 479 (526)
Q Consensus 401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~-~~~~~~KP~p~~~~~~~~~l~~~~p~~ 479 (526)
++++||+.++|+.|+++|++++|+||++...+..+++.+...++..+|+.+. ++....||+|++|.++++++|++ |++
T Consensus 143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~KP~p~~~~~a~~~~~~~-p~~ 221 (286)
T PLN02779 143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVPKKKPDPDIYNLAAETLGVD-PSR 221 (286)
T ss_pred CCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccccCCCCCCHHHHHHHHHHhCcC-hHH
Confidence 4799999999999999999999999999999998888762112334444443 45667899999999999999997 999
Q ss_pred EEEEecCHhhHHHHHHcCCcEEEEeCCC-CCCCCCCCCCeEecCCCCC
Q 009774 480 ILFVTDVYQEATAAKAAGLEVVISIRPG-NGPLPENHGFKTINSFAEI 526 (526)
Q Consensus 480 ~l~VgDs~~Di~~A~~aG~~~i~v~~~~-~~~~~~~~~~~~i~~l~eL 526 (526)
|+||||+..|+++|+++||.+|++.++. +.... ..++.+++++.|+
T Consensus 222 ~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l-~~ad~vi~~~~~l 268 (286)
T PLN02779 222 CVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDF-SGADAVFDCLGDV 268 (286)
T ss_pred EEEEeCCHHhHHHHHHcCCEEEEEccCCcccccc-CCCcEEECChhhc
Confidence 9999999999999999999999998873 33333 3348899998875
No 63
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.90 E-value=1.2e-22 Score=196.80 Aligned_cols=122 Identities=25% Similarity=0.276 Sum_probs=106.5
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 477 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p 477 (526)
..+++|++.++|+.|+++ ++++++||+....+...++.+ ||.++||.++ +..+..||+|++|..+++++|++ |
T Consensus 97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~---gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~-p 171 (229)
T COG1011 97 LLPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQL---GLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVP-P 171 (229)
T ss_pred hCccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHc---CChhhhheEEEecccccCCCCcHHHHHHHHHcCCC-c
Confidence 357999999999999999 999999999999999999999 9999999999 45778899999999999999997 9
Q ss_pred CcEEEEecCH-hhHHHHHHcCCcEEEEeCCCCCC-CCCCCCCeEecCCCCC
Q 009774 478 SEILFVTDVY-QEATAAKAAGLEVVISIRPGNGP-LPENHGFKTINSFAEI 526 (526)
Q Consensus 478 ~~~l~VgDs~-~Di~~A~~aG~~~i~v~~~~~~~-~~~~~~~~~i~~l~eL 526 (526)
++|+||||+. +||.+|+++||++||+++++... .....++..++++.||
T Consensus 172 ~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i~~l~~l 222 (229)
T COG1011 172 EEALFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEISSLAEL 222 (229)
T ss_pred ceEEEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEEcCHHHH
Confidence 9999999999 78899999999999999985432 1113347788877653
No 64
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=99.90 E-value=2.5e-22 Score=191.35 Aligned_cols=98 Identities=19% Similarity=0.256 Sum_probs=89.8
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 477 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p 477 (526)
...++||+.++|+.|+++|++++|+||++... +..++++ |+..+|+.++ +.....||+|++|+++++++|++ |
T Consensus 103 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~-~~~l~~~---~l~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~-~ 177 (203)
T TIGR02252 103 PWQVYPDAIKLLKDLRERGLILGVISNFDSRL-RGLLEAL---GLLEYFDFVVTSYEVGAEKPDPKIFQEALERAGIS-P 177 (203)
T ss_pred cceeCcCHHHHHHHHHHCCCEEEEEeCCchhH-HHHHHHC---CcHHhcceEEeecccCCCCCCHHHHHHHHHHcCCC-h
Confidence 34799999999999999999999999998764 6788999 9999999998 45677899999999999999997 9
Q ss_pred CcEEEEecCH-hhHHHHHHcCCcEEE
Q 009774 478 SEILFVTDVY-QEATAAKAAGLEVVI 502 (526)
Q Consensus 478 ~~~l~VgDs~-~Di~~A~~aG~~~i~ 502 (526)
++|+||||+. .|+.+|+++||++||
T Consensus 178 ~~~~~IgD~~~~Di~~A~~aG~~~i~ 203 (203)
T TIGR02252 178 EEALHIGDSLRNDYQGARAAGWRALL 203 (203)
T ss_pred hHEEEECCCchHHHHHHHHcCCeeeC
Confidence 9999999998 899999999999986
No 65
>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]
Probab=99.89 E-value=2.9e-22 Score=184.54 Aligned_cols=242 Identities=48% Similarity=0.759 Sum_probs=220.8
Q ss_pred CCCceEEEEeccccccccccccccchhhHHhhHHhhhhhhcCChhhHHHHHHHHHHhHHhhhhccCCccCCCCCCCchHH
Q 009774 281 GLFPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEE 360 (526)
Q Consensus 281 ~~~ikaVlFD~DGTL~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (526)
-.+.+.++.|+.||.+..+|+.+.+|||+...+.+++...|..+...+.+..++....++. ....+.+|++....+.+.
T Consensus 5 ~~~~k~~llDIegttt~isfVkd~LFpya~~nV~~~v~~~~~~~~~~~iv~~l~~~~~e~~-~~~~~~v~i~~~~~~~e~ 83 (254)
T KOG2630|consen 5 VRKWKELLLDIEGTTTSISFVKDVLFPYAKENVEELVQEPYETKIGQEIVSELRQRPEEQL-GSTNNIVPITDVTAAEEA 83 (254)
T ss_pred hhhhhhheEeEEeeecchHHHHHhhhHHHHHHHHHHhcCccccchHHHHHHHHhhhHHHHh-ccccCcccccccchhhhh
Confidence 3567899999999999999999999999999999999999999988899999999887777 677788888887766666
Q ss_pred HHHHHHHHHHHHHhhhhcchhhHhhhHHHHHHhhhcccccCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcC
Q 009774 361 VIAALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSN 440 (526)
Q Consensus 361 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~y~~~~~~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~ 440 (526)
.++ ..+.+..++.+.+.+.++++++.+|+.+|.........|+++...++.++..|++++|.|+++...+..+..+..
T Consensus 84 ~v~--v~~v~~~~~~d~k~t~~K~lQg~iw~~gy~sg~lk~~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~s~ 161 (254)
T KOG2630|consen 84 DVH--VANVEKLISFDEKRTILKQLQGRIWAAGYESGELKAHVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGYSD 161 (254)
T ss_pred hhH--HHHHHHHHhhhcccchhHHHHHHHHHhhcccccccccccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcccC
Confidence 666 667788899999999999999999999999998888999999999999999999999999999999999999888
Q ss_pred CCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCC--Ce
Q 009774 441 YGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHG--FK 518 (526)
Q Consensus 441 ~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~--~~ 518 (526)
.+.+.+|++.+||...+.|-....|.++.+.+|.+ |.+++|.-|-+....+|+.+|+.+..+.|+|+.+..+.+. +.
T Consensus 162 ~gdl~~y~~gyfDt~iG~K~e~~sy~~I~~~Ig~s-~~eiLfLTd~~~Ea~aa~~aGl~a~l~~rPgna~l~dd~~~~y~ 240 (254)
T KOG2630|consen 162 AGDLRKYISGYFDTTIGLKVESQSYKKIGHLIGKS-PREILFLTDVPREAAAARKAGLQAGLVSRPGNAPLPDDAKVEYC 240 (254)
T ss_pred cchHHHHhhhhhhccccceehhHHHHHHHHHhCCC-hhheEEeccChHHHHHHHhcccceeeeecCCCCCCCccccccee
Confidence 88999999999999889999999999999999997 9999999999999999999999999999998887776666 78
Q ss_pred EecCCCCC
Q 009774 519 TINSFAEI 526 (526)
Q Consensus 519 ~i~~l~eL 526 (526)
++.+|..|
T Consensus 241 ~i~~F~~l 248 (254)
T KOG2630|consen 241 VIWSFEIL 248 (254)
T ss_pred eeccchhh
Confidence 88888754
No 66
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=99.89 E-value=8.1e-23 Score=191.52 Aligned_cols=97 Identities=21% Similarity=0.299 Sum_probs=89.2
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS 478 (526)
Q Consensus 401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p~ 478 (526)
..++||+.++|+.|+++|++++|+||+.. ...+++++ ++..+|+.++ ++....||+|++|++++++++++ |+
T Consensus 86 ~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~---~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~-~~ 159 (185)
T TIGR01990 86 ADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKL---GLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVS-PS 159 (185)
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhc---CcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCCC-HH
Confidence 47999999999999999999999999753 45689999 9999999988 45677899999999999999997 99
Q ss_pred cEEEEecCHhhHHHHHHcCCcEEEE
Q 009774 479 EILFVTDVYQEATAAKAAGLEVVIS 503 (526)
Q Consensus 479 ~~l~VgDs~~Di~~A~~aG~~~i~v 503 (526)
+|+||||++.|+++|+++||++|+|
T Consensus 160 ~~v~vgD~~~di~aA~~aG~~~i~v 184 (185)
T TIGR01990 160 ECIGIEDAQAGIEAIKAAGMFAVGV 184 (185)
T ss_pred HeEEEecCHHHHHHHHHcCCEEEec
Confidence 9999999999999999999999987
No 67
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=99.89 E-value=1.6e-22 Score=189.44 Aligned_cols=98 Identities=24% Similarity=0.342 Sum_probs=90.5
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 477 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p 477 (526)
...++||+.++|+.|+++|++++++||+ ..++.+++++ ++..+|+.++ +.....||+|++|.+++++++++ |
T Consensus 86 ~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~---~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~-~ 159 (185)
T TIGR02009 86 GAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKL---GLTDYFDAIVDADEVKEGKPHPETFLLAAELLGVS-P 159 (185)
T ss_pred CCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHc---ChHHHCCEeeehhhCCCCCCChHHHHHHHHHcCCC-H
Confidence 4689999999999999999999999998 5578889999 9999999998 44667899999999999999997 9
Q ss_pred CcEEEEecCHhhHHHHHHcCCcEEEE
Q 009774 478 SEILFVTDVYQEATAAKAAGLEVVIS 503 (526)
Q Consensus 478 ~~~l~VgDs~~Di~~A~~aG~~~i~v 503 (526)
++|+||||+..|+++|+++|+++|+|
T Consensus 160 ~~~v~IgD~~~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 160 NECVVFEDALAGVQAARAAGMFAVAV 185 (185)
T ss_pred HHeEEEeCcHhhHHHHHHCCCeEeeC
Confidence 99999999999999999999999875
No 68
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=99.89 E-value=2.6e-22 Score=214.48 Aligned_cols=121 Identities=21% Similarity=0.214 Sum_probs=102.8
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEe-CCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFD-TAVGNKRETPSYVEITNSLGVDKPS 478 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~-~~~~~KP~p~~~~~~~~~l~~~~p~ 478 (526)
..++|||+.++|+.|+++|++++|+||++...++.+++++ ++.++|+.++. +....||+|++|..+++++ + |+
T Consensus 328 ~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~---~l~~~f~~i~~~d~v~~~~kP~~~~~al~~l--~-~~ 401 (459)
T PRK06698 328 KGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYY---DLDQWVTETFSIEQINSLNKSDLVKSILNKY--D-IK 401 (459)
T ss_pred CCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHC---CcHhhcceeEecCCCCCCCCcHHHHHHHHhc--C-cc
Confidence 4579999999999999999999999999999999999999 99999999982 2223478889999999886 4 67
Q ss_pred cEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCCCC
Q 009774 479 EILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 526 (526)
Q Consensus 479 ~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL 526 (526)
+|++|||+++|+.+|+++||.+|++.++.........++++++++.||
T Consensus 402 ~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~l~el 449 (459)
T PRK06698 402 EAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVIDDLLEL 449 (459)
T ss_pred eEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeCCHHHH
Confidence 999999999999999999999999998743222223458899988764
No 69
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=99.88 E-value=9e-22 Score=181.47 Aligned_cols=100 Identities=29% Similarity=0.439 Sum_probs=94.8
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 477 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p 477 (526)
..+++||+.++|+.|+++|++++++||++...++..++++ |+.++|+.++ ++.+..||+|++|+.++++++++ |
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~---~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~-p 150 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERL---GLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIP-P 150 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHT---THGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSS-G
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCccccccccccc---ccccccccccccchhhhhhhHHHHHHHHHHHcCCC-c
Confidence 4579999999999999999999999999999999999999 9999999998 45677899999999999999997 9
Q ss_pred CcEEEEecCHhhHHHHHHcCCcEEEE
Q 009774 478 SEILFVTDVYQEATAAKAAGLEVVIS 503 (526)
Q Consensus 478 ~~~l~VgDs~~Di~~A~~aG~~~i~v 503 (526)
++|+||||++.|+++|+++||.+|+|
T Consensus 151 ~~~~~vgD~~~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 151 EEILFVGDSPSDVEAAKEAGIKTIWV 176 (176)
T ss_dssp GGEEEEESSHHHHHHHHHTTSEEEEE
T ss_pred ceEEEEeCCHHHHHHHHHcCCeEEeC
Confidence 99999999999999999999999986
No 70
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=99.88 E-value=7.5e-22 Score=185.62 Aligned_cols=99 Identities=19% Similarity=0.330 Sum_probs=91.0
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 477 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p 477 (526)
...++|+ .++|+.|++. ++++|+||++...++.+++++ ++.++|+.++ ++....||+|++|++++++++++ |
T Consensus 86 ~~~~~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~---~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~-~ 159 (188)
T PRK10725 86 SVEPLPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHL---GLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQ-P 159 (188)
T ss_pred cCCCccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhC---CcHhHceEEEehhhccCCCCChHHHHHHHHHcCCC-H
Confidence 3468885 6999999875 899999999999999999999 9999999988 55678899999999999999997 9
Q ss_pred CcEEEEecCHhhHHHHHHcCCcEEEEe
Q 009774 478 SEILFVTDVYQEATAAKAAGLEVVISI 504 (526)
Q Consensus 478 ~~~l~VgDs~~Di~~A~~aG~~~i~v~ 504 (526)
++|+||||+..|+++|+++|+++|++.
T Consensus 160 ~~~l~igDs~~di~aA~~aG~~~i~~~ 186 (188)
T PRK10725 160 TQCVVFEDADFGIQAARAAGMDAVDVR 186 (188)
T ss_pred HHeEEEeccHhhHHHHHHCCCEEEeec
Confidence 999999999999999999999999874
No 71
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=99.88 E-value=4.8e-22 Score=186.47 Aligned_cols=97 Identities=25% Similarity=0.389 Sum_probs=88.7
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcC----CCCCHHHHHHHHHHcC
Q 009774 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVG----NKRETPSYVEITNSLG 473 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~----~KP~p~~~~~~~~~l~ 473 (526)
..+++||+.++|+.|+ ++++|+||++...+..+++.+ |+.++||.++ ++... .||+|++|+++++++|
T Consensus 82 ~~~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~---gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~ 155 (184)
T TIGR01993 82 KLKPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRL---GIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAG 155 (184)
T ss_pred hCCCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHc---CcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhC
Confidence 3579999999999998 479999999999999999999 9999999988 33444 5999999999999999
Q ss_pred CCCCCcEEEEecCHhhHHHHHHcCCcEEEE
Q 009774 474 VDKPSEILFVTDVYQEATAAKAAGLEVVIS 503 (526)
Q Consensus 474 ~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v 503 (526)
++ |++|+||||++.|+.+|+++||++|+|
T Consensus 156 ~~-~~~~l~vgD~~~di~aA~~~G~~~i~v 184 (184)
T TIGR01993 156 VD-PERAIFFDDSARNIAAAKALGMKTVLV 184 (184)
T ss_pred CC-ccceEEEeCCHHHHHHHHHcCCEEeeC
Confidence 97 999999999999999999999999975
No 72
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=99.87 E-value=7.5e-22 Score=189.28 Aligned_cols=103 Identities=16% Similarity=0.166 Sum_probs=89.8
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHH--HHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCC
Q 009774 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLA--QRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVD 475 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~--~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~ 475 (526)
...++||+.++|+.|+++|++++|+||++... ....+..+ ++.++||.++ ++.+..||+|++|+.+++++|++
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~---~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~ 168 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPG---DIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVA 168 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhh---hhHhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCC
Confidence 45799999999999999999999999987543 22334445 7889999998 34667899999999999999997
Q ss_pred CCCcEEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774 476 KPSEILFVTDVYQEATAAKAAGLEVVISIRP 506 (526)
Q Consensus 476 ~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~ 506 (526)
|++|+||||+..|+.+|+++||.+|++.++
T Consensus 169 -~~~~l~i~D~~~di~aA~~aG~~~i~v~~~ 198 (211)
T TIGR02247 169 -PEECVFLDDLGSNLKPAAALGITTIKVSDE 198 (211)
T ss_pred -HHHeEEEcCCHHHHHHHHHcCCEEEEECCH
Confidence 999999999999999999999999999875
No 73
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.87 E-value=3.9e-21 Score=221.99 Aligned_cols=121 Identities=19% Similarity=0.217 Sum_probs=108.0
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcc-cccceEE--eCCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLR-KYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS 478 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~-~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p~ 478 (526)
.++||+.++|+.|+++|++++|+||+....++..++++ ++. .+||.++ ++....||+|++|++++++++++ |+
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~---gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~-p~ 236 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAA---GLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVP-TS 236 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHc---CCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcC-cc
Confidence 48999999999999999999999999999999999999 885 7899998 45777899999999999999997 99
Q ss_pred cEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCC-CCCCeEecCCCCC
Q 009774 479 EILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPE-NHGFKTINSFAEI 526 (526)
Q Consensus 479 ~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~-~~~~~~i~~l~eL 526 (526)
+|+||||+..|+++|+++||++|++.++.....+. ..++.+++++.|+
T Consensus 237 e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el 285 (1057)
T PLN02919 237 ECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNI 285 (1057)
T ss_pred cEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHC
Confidence 99999999999999999999999999975433332 3448899998875
No 74
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=99.86 E-value=5e-21 Score=178.75 Aligned_cols=98 Identities=26% Similarity=0.338 Sum_probs=90.6
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS 478 (526)
Q Consensus 401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p~ 478 (526)
.+++||+.++|+.|+++|++++|+||++... ..++.++ |+.++|+.++ +.....||+|++|+.++++++++ |+
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~---~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~-~~ 158 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQEL---GLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLK-PE 158 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhc---CCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCC-cc
Confidence 5799999999999999999999999999988 6666668 9999999988 35678999999999999999997 99
Q ss_pred cEEEEecCHhhHHHHHHcCCcEEEE
Q 009774 479 EILFVTDVYQEATAAKAAGLEVVIS 503 (526)
Q Consensus 479 ~~l~VgDs~~Di~~A~~aG~~~i~v 503 (526)
+|+||||++.|+.+|+++|+.+|++
T Consensus 159 ~~~~vgD~~~di~aA~~~G~~~i~v 183 (183)
T TIGR01509 159 ECLFVDDSPAGIEAAKAAGMHTVLV 183 (183)
T ss_pred eEEEEcCCHHHHHHHHHcCCEEEeC
Confidence 9999999999999999999999975
No 75
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=99.86 E-value=7.8e-21 Score=180.64 Aligned_cols=102 Identities=18% Similarity=0.258 Sum_probs=91.7
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCCCc
Q 009774 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPSE 479 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p~~ 479 (526)
.++||+.++|+.|+++|++++|+||++.......+.... ++..+||.++ ++.+..||+|++|+++++++|++ |++
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~--~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~-p~~ 160 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYP--EVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFS-AAD 160 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhch--hHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCC-hhH
Confidence 589999999999999999999999999887665554421 7888999998 45778899999999999999997 999
Q ss_pred EEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774 480 ILFVTDVYQEATAAKAAGLEVVISIRP 506 (526)
Q Consensus 480 ~l~VgDs~~Di~~A~~aG~~~i~v~~~ 506 (526)
|+||||++.|+.+|+++||++|++.++
T Consensus 161 ~l~vgD~~~di~aA~~aG~~~i~~~~~ 187 (199)
T PRK09456 161 AVFFDDNADNIEAANALGITSILVTDK 187 (199)
T ss_pred eEEeCCCHHHHHHHHHcCCEEEEecCC
Confidence 999999999999999999999999875
No 76
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=99.86 E-value=1.5e-20 Score=178.33 Aligned_cols=90 Identities=13% Similarity=0.166 Sum_probs=82.9
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCCCc
Q 009774 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPSE 479 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p~~ 479 (526)
.+.+++.++|+.|+++|++++|+||++...++.+++++ |+..+|+.++ ++... ||+|++|.++++++|++ |++
T Consensus 106 ~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~---gl~~~f~~~~~~~~~~~-KP~p~~~~~~~~~~~~~-~~~ 180 (197)
T TIGR01548 106 ETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTH---GLEILFPVQIWMEDCPP-KPNPEPLILAAKALGVE-ACH 180 (197)
T ss_pred ccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHc---CchhhCCEEEeecCCCC-CcCHHHHHHHHHHhCcC-ccc
Confidence 46677799999999999999999999999999999999 9999999988 34455 99999999999999997 999
Q ss_pred EEEEecCHhhHHHHHHc
Q 009774 480 ILFVTDVYQEATAAKAA 496 (526)
Q Consensus 480 ~l~VgDs~~Di~~A~~a 496 (526)
|+||||+++|+.+|+++
T Consensus 181 ~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 181 AAMVGDTVDDIITGRKA 197 (197)
T ss_pred EEEEeCCHHHHHHHHhC
Confidence 99999999999999975
No 77
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=99.85 E-value=1.1e-20 Score=175.93 Aligned_cols=119 Identities=21% Similarity=0.254 Sum_probs=96.3
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchH---------------HHHHHHHhhcCCCCcccccceEEe-------------
Q 009774 402 EVFDDVPEALEKWHSLGTKVYIYSSGSR---------------LAQRLIFGNSNYGDLRKYLSGFFD------------- 453 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~---------------~~~~~~l~~l~~~gl~~~fd~i~~------------- 453 (526)
+++||+.++|++|+++|++++|+||++. ......++.+ ++. |+.++.
T Consensus 26 ~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~--~~~i~~~~~~~~~~~~~~~ 100 (176)
T TIGR00213 26 EFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAER---DVD--LDGIYYCPHHPEGVEEFRQ 100 (176)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHc---CCC--ccEEEECCCCCcccccccC
Confidence 5899999999999999999999999985 2334455555 554 666651
Q ss_pred CCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcE-EEEeCCCCC-CCCCCCCCeEecCCCCC
Q 009774 454 TAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEV-VISIRPGNG-PLPENHGFKTINSFAEI 526 (526)
Q Consensus 454 ~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~-i~v~~~~~~-~~~~~~~~~~i~~l~eL 526 (526)
+....||+|++|++++++++++ |++|+||||+..|+++|+++|+.+ +++.++... ......++.+|+++.||
T Consensus 101 ~~~~~KP~p~~~~~a~~~~~~~-~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el 174 (176)
T TIGR00213 101 VCDCRKPKPGMLLQARKELHID-MAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLADL 174 (176)
T ss_pred CCCCCCCCHHHHHHHHHHcCcC-hhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHHh
Confidence 2335799999999999999997 999999999999999999999998 799987432 22223359999999876
No 78
>PLN02811 hydrolase
Probab=99.83 E-value=4.5e-20 Score=178.20 Aligned_cols=123 Identities=17% Similarity=0.241 Sum_probs=101.8
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHH-HHhhcCCCCcccccceEE--e--CCcCCCCCHHHHHHHHHHcC-
Q 009774 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRL-IFGNSNYGDLRKYLSGFF--D--TAVGNKRETPSYVEITNSLG- 473 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~-~l~~l~~~gl~~~fd~i~--~--~~~~~KP~p~~~~~~~~~l~- 473 (526)
...++||+.++|+.|+++|++++|+||++...... ..+.. ++.++|+.++ + ++...||+|++|++++++++
T Consensus 76 ~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~---~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~ 152 (220)
T PLN02811 76 TSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHG---ELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFED 152 (220)
T ss_pred hCCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccH---HHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCC
Confidence 45799999999999999999999999998765443 33344 7889999988 4 45678999999999999997
Q ss_pred --CCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCCCC
Q 009774 474 --VDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 526 (526)
Q Consensus 474 --~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL 526 (526)
++ |++|+||||+..|+++|+++||++|++.++.........++.+++++.|+
T Consensus 153 ~~~~-~~~~v~IgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vi~~~~e~ 206 (220)
T PLN02811 153 GPVD-PGKVLVFEDAPSGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVLSSLLDF 206 (220)
T ss_pred CCCC-ccceEEEeccHhhHHHHHHCCCeEEEEeCCCCcHhhhhchhhHhcCHhhC
Confidence 97 99999999999999999999999999988743222222347888888764
No 79
>PHA02597 30.2 hypothetical protein; Provisional
Probab=99.83 E-value=6.5e-20 Score=173.95 Aligned_cols=116 Identities=16% Similarity=0.187 Sum_probs=91.9
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCccccc----ceEEeCCcCCCCCHHHHHHHHHHcCCCC
Q 009774 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL----SGFFDTAVGNKRETPSYVEITNSLGVDK 476 (526)
Q Consensus 401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~f----d~i~~~~~~~KP~p~~~~~~~~~l~~~~ 476 (526)
..++||+.++|++|+++ ++++++||++.......++.+ ++..+| +.++.. ...||+|++|+++++++|
T Consensus 73 ~~~~pG~~e~L~~L~~~-~~~~i~Tn~~~~~~~~~~~~~---~l~~~f~~~f~~i~~~-~~~~~kp~~~~~a~~~~~--- 144 (197)
T PHA02597 73 LSAYDDALDVINKLKED-YDFVAVTALGDSIDALLNRQF---NLNALFPGAFSEVLMC-GHDESKEKLFIKAKEKYG--- 144 (197)
T ss_pred ccCCCCHHHHHHHHHhc-CCEEEEeCCccchhHHHHhhC---CHHHhCCCcccEEEEe-ccCcccHHHHHHHHHHhC---
Confidence 46999999999999987 578999998887777777787 776655 444421 124788999999999998
Q ss_pred CCcEEEEecCHhhHHHHHHc--CCcEEEEeCCCCCCCCCCCCCeEecCCCCC
Q 009774 477 PSEILFVTDVYQEATAAKAA--GLEVVISIRPGNGPLPENHGFKTINSFAEI 526 (526)
Q Consensus 477 p~~~l~VgDs~~Di~~A~~a--G~~~i~v~~~~~~~~~~~~~~~~i~~l~eL 526 (526)
|++|+||||+..|+.+|+++ ||++|+++|+.. +. ....++.++|+.||
T Consensus 145 ~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~~-~~-~~~~~~~~~~~~~~ 194 (197)
T PHA02597 145 DRVVCFVDDLAHNLDAAHEALSQLPVIHMLRGER-DH-IPKLAHRVKSWNDI 194 (197)
T ss_pred CCcEEEeCCCHHHHHHHHHHHcCCcEEEecchhh-cc-ccchhhhhccHHHH
Confidence 57899999999999999999 999999998843 11 11236888888764
No 80
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=99.82 E-value=7.1e-20 Score=171.40 Aligned_cols=119 Identities=19% Similarity=0.207 Sum_probs=95.5
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchH---------------HHHHHHHhhcCCCCcccccceEEe-------CCcCCC
Q 009774 402 EVFDDVPEALEKWHSLGTKVYIYSSGSR---------------LAQRLIFGNSNYGDLRKYLSGFFD-------TAVGNK 459 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~---------------~~~~~~l~~l~~~gl~~~fd~i~~-------~~~~~K 459 (526)
.++||+.++|++|+++|++++|+||++. ......++++ |+ +|+.++. .....|
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~---g~--~f~~i~~~~~~~~~~~~~~K 103 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADR---GG--RLDGIYYCPHHPEDGCDCRK 103 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHc---CC--ccceEEECCCCCCCCCcCCC
Confidence 4899999999999999999999999973 3344556666 65 4777662 235689
Q ss_pred CCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCC-CCCCCCC--CeEecCCCCC
Q 009774 460 RETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNG-PLPENHG--FKTINSFAEI 526 (526)
Q Consensus 460 P~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~-~~~~~~~--~~~i~~l~eL 526 (526)
|+|++|.++++++|++ |++|+||||+..|+.+|+++|+.+|++.++... ......+ +.+++++.||
T Consensus 104 P~p~~~~~~~~~l~~~-~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el 172 (181)
T PRK08942 104 PKPGMLLSIAERLNID-LAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADL 172 (181)
T ss_pred CCHHHHHHHHHHcCCC-hhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHH
Confidence 9999999999999997 999999999999999999999999999887322 2222233 7888887653
No 81
>PRK06769 hypothetical protein; Validated
Probab=99.81 E-value=9e-20 Score=169.24 Aligned_cols=121 Identities=11% Similarity=0.094 Sum_probs=95.4
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHH--------HHHHHHhhcCCCCcccccceEE---eCCcCCCCCHHHHHHHHH
Q 009774 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRL--------AQRLIFGNSNYGDLRKYLSGFF---DTAVGNKRETPSYVEITN 470 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~--------~~~~~l~~l~~~gl~~~fd~i~---~~~~~~KP~p~~~~~~~~ 470 (526)
.+|||+.++|++|+++|++++|+||++.. .....++.+ |+.++|.... +.....||+|++|+++++
T Consensus 28 ~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~---g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~ 104 (173)
T PRK06769 28 TLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGF---GFDDIYLCPHKHGDGCECRKPSTGMLLQAAE 104 (173)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhC---CcCEEEECcCCCCCCCCCCCCCHHHHHHHHH
Confidence 48999999999999999999999998752 123346666 7666554433 234678999999999999
Q ss_pred HcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCC-CC------CCC-CCCCCeEecCCCCC
Q 009774 471 SLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPG-NG------PLP-ENHGFKTINSFAEI 526 (526)
Q Consensus 471 ~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~-~~------~~~-~~~~~~~i~~l~eL 526 (526)
+++++ |++|+||||+..|+.+|+++|+.+|++.++. .. ... ...++++++++.||
T Consensus 105 ~l~~~-p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~~~~el 167 (173)
T PRK06769 105 KHGLD-LTQCAVIGDRWTDIVAAAKVNATTILVRTGAGYDALHTYRDKWAHIEPNYIAENFEDA 167 (173)
T ss_pred HcCCC-HHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCchhhhhhhcccccCCCcchhhCHHHH
Confidence 99997 9999999999999999999999999999873 31 112 22347888887664
No 82
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=99.80 E-value=1.4e-19 Score=168.25 Aligned_cols=86 Identities=23% Similarity=0.290 Sum_probs=79.1
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 477 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p 477 (526)
...++||+.++|+ +++|+||++...++.+++++ ++.++|+.++ +++...||+|++|+++++++|++ |
T Consensus 88 ~~~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~---~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~-p 156 (175)
T TIGR01493 88 NLPPWPDSAAALA-------RVAILSNASHWAFDQFAQQA---GLPWYFDRAFSVDTVRAYKPDPVVYELVFDTVGLP-P 156 (175)
T ss_pred cCCCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHC---CCHHHHhhhccHhhcCCCCCCHHHHHHHHHHHCCC-H
Confidence 4579999999999 38999999999999999999 9999999987 45678899999999999999997 9
Q ss_pred CcEEEEecCHhhHHHHHHc
Q 009774 478 SEILFVTDVYQEATAAKAA 496 (526)
Q Consensus 478 ~~~l~VgDs~~Di~~A~~a 496 (526)
++|+||||+..|+.+|+++
T Consensus 157 ~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 157 DRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HHeEeEecChhhHHHHhcC
Confidence 9999999999999999874
No 83
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=99.80 E-value=1.6e-19 Score=163.21 Aligned_cols=101 Identities=22% Similarity=0.223 Sum_probs=84.5
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchH---------------HHHHHHHhhcCCCCccc---ccceEE--eCCcCCCCC
Q 009774 402 EVFDDVPEALEKWHSLGTKVYIYSSGSR---------------LAQRLIFGNSNYGDLRK---YLSGFF--DTAVGNKRE 461 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~---------------~~~~~~l~~l~~~gl~~---~fd~i~--~~~~~~KP~ 461 (526)
+++||+.++|+.|+++||+++|+||++. ......++++ ++.. +|.... +.....||+
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~l~~~~~~~~~~~~~~~~~~~KP~ 103 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQL---GVAVDGVLFCPHHPADNCSCRKPK 103 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhC---CCceeEEEECCCCCCCCCCCCCCC
Confidence 4889999999999999999999999874 4556677888 7752 111111 223457999
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774 462 TPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 506 (526)
Q Consensus 462 p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~ 506 (526)
|++|++++++++++ |++|+||||+..|+++|+++||++||+.++
T Consensus 104 ~~~~~~~~~~~~~~-~~e~i~IGDs~~Di~~A~~~Gi~~v~i~~~ 147 (147)
T TIGR01656 104 PGLILEALKRLGVD-ASRSLVVGDRLRDLQAARNAGLAAVLLVDG 147 (147)
T ss_pred HHHHHHHHHHcCCC-hHHEEEEcCCHHHHHHHHHCCCCEEEecCC
Confidence 99999999999997 999999999999999999999999999874
No 84
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=99.80 E-value=7.7e-19 Score=159.71 Aligned_cols=91 Identities=30% Similarity=0.438 Sum_probs=82.0
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 477 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p 477 (526)
...++||+.++|+.|+++|++++|+||++...+...++.+ +..+|+.++ ++.. .||+|++|.+++++++++ |
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~----l~~~f~~i~~~~~~~-~Kp~~~~~~~~~~~~~~~-~ 135 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH----LGDYFDLILGSDEFG-AKPEPEIFLAALESLGLP-P 135 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH----HHhcCcEEEecCCCC-CCcCHHHHHHHHHHcCCC-C
Confidence 3357899999999999999999999999999999888874 567888887 3355 899999999999999997 9
Q ss_pred CcEEEEecCHhhHHHHHHcC
Q 009774 478 SEILFVTDVYQEATAAKAAG 497 (526)
Q Consensus 478 ~~~l~VgDs~~Di~~A~~aG 497 (526)
+|+||||+..|+.+|+++|
T Consensus 136 -~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 136 -EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred -CEEEEeCCHHHHHHHHHcc
Confidence 9999999999999999998
No 85
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.80 E-value=8.2e-19 Score=167.11 Aligned_cols=103 Identities=19% Similarity=0.210 Sum_probs=94.0
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS 478 (526)
Q Consensus 401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p~ 478 (526)
-+..+++.++|+.||++|+.++++||.+.... ..+..+ ++..+||.++ ...+..||+|++|+.+++++++. |+
T Consensus 112 ~~~~~~~~~~lq~lR~~g~~l~iisN~d~r~~-~~l~~~---~l~~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~-Pe 186 (237)
T KOG3085|consen 112 WKYLDGMQELLQKLRKKGTILGIISNFDDRLR-LLLLPL---GLSAYFDFVVESCEVGLEKPDPRIFQLALERLGVK-PE 186 (237)
T ss_pred ceeccHHHHHHHHHHhCCeEEEEecCCcHHHH-HHhhcc---CHHHhhhhhhhhhhhccCCCChHHHHHHHHHhCCC-hH
Confidence 36778999999999999999999999998876 678888 9999999999 45788999999999999999997 99
Q ss_pred cEEEEecCH-hhHHHHHHcCCcEEEEeCCCC
Q 009774 479 EILFVTDVY-QEATAAKAAGLEVVISIRPGN 508 (526)
Q Consensus 479 ~~l~VgDs~-~Di~~A~~aG~~~i~v~~~~~ 508 (526)
+|+||||+. +|+++|+++||.+++|.+..+
T Consensus 187 e~vhIgD~l~nD~~gA~~~G~~ailv~~~~~ 217 (237)
T KOG3085|consen 187 ECVHIGDLLENDYEGARNLGWHAILVDNSIT 217 (237)
T ss_pred HeEEecCccccccHhHHHcCCEEEEEccccc
Confidence 999999999 899999999999999987633
No 86
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=99.79 E-value=2.6e-18 Score=163.13 Aligned_cols=124 Identities=23% Similarity=0.284 Sum_probs=104.3
Q ss_pred ccCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--e--CCcCCCCCHHHHHHHHHHcCC
Q 009774 399 LEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--D--TAVGNKRETPSYVEITNSLGV 474 (526)
Q Consensus 399 ~~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~--~~~~~KP~p~~~~~~~~~l~~ 474 (526)
....+.||+.++++.|+.+|++++++|+.++.....+++++. ++...|..++ + ++..+||+|++|+.+++++|.
T Consensus 89 ~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~--~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~~ 166 (222)
T KOG2914|consen 89 MNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHE--DIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLGV 166 (222)
T ss_pred cccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhh--HHHHhcCCCeecCCccccCCCCCchHHHHHHHhcCC
Confidence 345799999999999999999999999999999999999883 4888888776 2 367789999999999999999
Q ss_pred CCC-CcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCCC
Q 009774 475 DKP-SEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAE 525 (526)
Q Consensus 475 ~~p-~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~e 525 (526)
. | +.||+++|++.++++|+++||++|++....-.......+...++++.+
T Consensus 167 ~-~~~k~lVfeds~~Gv~aa~aagm~vi~v~~~~~~~~~~~~~~~~~~~~~~ 217 (222)
T KOG2914|consen 167 P-PPSKCLVFEDSPVGVQAAKAAGMQVVGVATPDLSNLFSAGATLILESLED 217 (222)
T ss_pred C-CccceEEECCCHHHHHHHHhcCCeEEEecCCCcchhhhhccceecccccc
Confidence 7 7 999999999999999999999999998854333333344566666543
No 87
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=99.78 E-value=1.2e-18 Score=154.39 Aligned_cols=97 Identities=23% Similarity=0.318 Sum_probs=85.5
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCch--------HHHHHHHHhhcCCCCcccccceEE-eCCcCCCCCHHHHHHHHHHc
Q 009774 402 EVFDDVPEALEKWHSLGTKVYIYSSGS--------RLAQRLIFGNSNYGDLRKYLSGFF-DTAVGNKRETPSYVEITNSL 472 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~--------~~~~~~~l~~l~~~gl~~~fd~i~-~~~~~~KP~p~~~~~~~~~l 472 (526)
.++||+.++|+.|+++|++++|+||++ ....+..++++ ++.. +.++ .. ...||+|++|+++++++
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~---~l~~--~~~~~~~-~~~KP~~~~~~~~~~~~ 98 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEEL---GVPI--DVLYACP-HCRKPKPGMFLEALKRF 98 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHC---CCCE--EEEEECC-CCCCCChHHHHHHHHHc
Confidence 488999999999999999999999999 78888899999 7753 3333 33 56799999999999999
Q ss_pred -CCCCCCcEEEEec-CHhhHHHHHHcCCcEEEEeC
Q 009774 473 -GVDKPSEILFVTD-VYQEATAAKAAGLEVVISIR 505 (526)
Q Consensus 473 -~~~~p~~~l~VgD-s~~Di~~A~~aG~~~i~v~~ 505 (526)
+++ |++|+|||| +..|+.+|+++|+.+|++++
T Consensus 99 ~~~~-~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~~ 132 (132)
T TIGR01662 99 NEID-PEESVYVGDQDLTDLQAAKRAGLAFILVAP 132 (132)
T ss_pred CCCC-hhheEEEcCCCcccHHHHHHCCCeEEEeeC
Confidence 597 999999999 68999999999999999864
No 88
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.78 E-value=4.9e-18 Score=163.69 Aligned_cols=97 Identities=19% Similarity=0.227 Sum_probs=85.1
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--e----------CCcCCCCCHHHHHHH
Q 009774 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--D----------TAVGNKRETPSYVEI 468 (526)
Q Consensus 401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~----------~~~~~KP~p~~~~~~ 468 (526)
.+++||+.++|+.|+++|++++|+||+....++.+++.+ ++..+|+..+ + .....+|+|++|..+
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~---~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 160 (219)
T TIGR00338 84 LPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKL---GLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLIL 160 (219)
T ss_pred CCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHc---CCCceEeeEEEEECCEEEEEecCcccCCcccHHHHHHH
Confidence 469999999999999999999999999999999999999 8888886432 1 112346789999999
Q ss_pred HHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEE
Q 009774 469 TNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV 501 (526)
Q Consensus 469 ~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i 501 (526)
+++++++ |++|+||||+.+|+.+|+++|+..+
T Consensus 161 ~~~~~~~-~~~~i~iGDs~~Di~aa~~ag~~i~ 192 (219)
T TIGR00338 161 LRKEGIS-PENTVAVGDGANDLSMIKAAGLGIA 192 (219)
T ss_pred HHHcCCC-HHHEEEEECCHHHHHHHHhCCCeEE
Confidence 9999997 9999999999999999999999754
No 89
>COG3347 Uncharacterized conserved protein [Function unknown]
Probab=99.77 E-value=3.6e-18 Score=168.44 Aligned_cols=185 Identities=16% Similarity=0.171 Sum_probs=141.6
Q ss_pred HHHHHHHHHH-HcCCccccCCceEEEeCCCCC-CCCccEEEEeccCCCCCCCCCCCEEEEeCCC----CcccC-------
Q 009774 33 LISELCRHFY-TLGWVSGTGGSITIKVHDDSI-PKPQQLILMSPSGVQKERMEPEDMYVLSGNG----TTLSS------- 99 (526)
Q Consensus 33 ~l~~~~r~l~-~~gl~~~~~GNiSvR~~~~~~-~~~~~~~litpsG~~~~~l~~~div~vd~dg----~~~~g------- 99 (526)
+++..+|.+. +..++...|||.|+++.+..+ .++-+.+||+.||.+++.++.+.++-|.++. +....
T Consensus 19 ~lvY~S~liGsdp~lv~~GGGNTS~K~~~~dl~G~~v~vmwVKgSG~dl~ti~~~gf~~v~l~~Ll~l~~~~~~~d~eMV 98 (404)
T COG3347 19 LLVYRSRLIGSDPDLVLHGGGNTSVKTGETDLVGEEVEVLWVKGSGWDLATIKADGFVPVRLDPLLALKKLDKLPDEEMV 98 (404)
T ss_pred HHHHHHhhhcCChhheecCCCccceeeeccccCCceeEEEEEeccccchhhhccCCCcccchHhHHHHHhcCCCCHHHHH
Confidence 4455555553 347788999999999976311 2233468999999999999999999888752 00000
Q ss_pred -----CCCCCCCCCCCCCCCchHHHHHHHHhcCcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCCcccCccce
Q 009774 100 -----PSPKPYPHKPPKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVV 174 (526)
Q Consensus 100 -----~~~~p~~~~p~~~S~E~~lH~~iy~~~dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v 174 (526)
.-..|+.. +||.|+.+|..+ .-+.|.|+|+..+++++++... .+.++.+.|. .+
T Consensus 99 ~~l~~~~~n~~~P---rPSIET~LHAfl----P~k~VdHtH~dAiiaIa~~~n~--------~~l~~~I~Gd------~~ 157 (404)
T COG3347 99 GYLRHCMLNPSAP---RPSIETLLHAFL----PFKVVDHTHADAIIAIAVQANG--------KALIREIFGD------RV 157 (404)
T ss_pred HHHHHhhcCCCCC---CcchhhhhHhhc----CcccccccCccceeeeccCCCH--------HHHHHHhcCC------eE
Confidence 00123222 459999999998 8899999999999999987542 2233334453 37
Q ss_pred eeecCCCCchHHHHHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHH
Q 009774 175 PIIENTAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLH 238 (526)
Q Consensus 175 pv~~~~~~~~~la~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~ 238 (526)
.++||.....+|+..+++.++.+|...+++|.|||+++||+|-.+||+++..+-.-|+-++..+
T Consensus 158 ~~vPYvrPGf~La~~iae~~~~~p~~~glvL~~HGL~t~gdtak~~Ye~~I~~V~~Ae~~l~~~ 221 (404)
T COG3347 158 VWVPYVRPGFPLAKAIAERFKANPDAEGLVLENHGLFTFGDTAKEAYERMISIVNEAEEYLARR 221 (404)
T ss_pred EEEeccCCCchHHHHHHHHHhhCCCceEEEeccccceEecccHHHHHHHHHHHHHHHHHHHHhh
Confidence 7888865567899999999999999999999999999999999999999999999999888776
No 90
>PLN02954 phosphoserine phosphatase
Probab=99.76 E-value=1.2e-17 Score=161.49 Aligned_cols=120 Identities=15% Similarity=0.202 Sum_probs=92.4
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcc--cccceEE--eC------------CcCCCCCHHH
Q 009774 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLR--KYLSGFF--DT------------AVGNKRETPS 464 (526)
Q Consensus 401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~--~~fd~i~--~~------------~~~~KP~p~~ 464 (526)
..++||+.++|+.|+++|++++|+||+....++.+++.+ |+. .+|+..+ +. ....+|+|+.
T Consensus 83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~---gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~ 159 (224)
T PLN02954 83 PRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAIL---GIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEA 159 (224)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHh---CCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHH
Confidence 468999999999999999999999999999999999999 886 3564321 11 1134678899
Q ss_pred HHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCC-CCCCCCCCeEecCCCCC
Q 009774 465 YVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNG-PLPENHGFKTINSFAEI 526 (526)
Q Consensus 465 ~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~-~~~~~~~~~~i~~l~eL 526 (526)
+++++++++.+ +|+||||+.+|+.+|+++|+.++...+++.. ......++++|+++.||
T Consensus 160 i~~~~~~~~~~---~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~el 219 (224)
T PLN02954 160 VQHIKKKHGYK---TMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTDFQDL 219 (224)
T ss_pred HHHHHHHcCCC---ceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECCHHHH
Confidence 99999988764 8999999999999999988886654333222 22223348899988764
No 91
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=99.76 E-value=6.5e-18 Score=154.48 Aligned_cols=99 Identities=13% Similarity=0.061 Sum_probs=88.3
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCc---------------hHHHHHHHHhhcCCCCcccccceEE-e------CCcCCC
Q 009774 402 EVFDDVPEALEKWHSLGTKVYIYSSG---------------SRLAQRLIFGNSNYGDLRKYLSGFF-D------TAVGNK 459 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~G~~l~vvTn~---------------~~~~~~~~l~~l~~~gl~~~fd~i~-~------~~~~~K 459 (526)
++|||+.++|++|+++|++++|+||+ ........++.+ |+. |+.++ + +....|
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~---gl~--fd~ii~~~~~~~~~~~~~K 103 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQ---GII--FDDVLICPHFPDDNCDCRK 103 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHC---CCc--eeEEEECCCCCCCCCCCCC
Confidence 58999999999999999999999997 355677788988 886 77554 2 356789
Q ss_pred CCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774 460 RETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 506 (526)
Q Consensus 460 P~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~ 506 (526)
|+|++|..++++++++ |++|+||||+..|+++|+++||.++++.++
T Consensus 104 P~~~~~~~~~~~~~~~-~~e~l~IGD~~~Di~~A~~aGi~~i~~~~~ 149 (161)
T TIGR01261 104 PKIKLLEPYLKKNLID-KARSYVIGDRETDMQLAENLGIRGIQYDEE 149 (161)
T ss_pred CCHHHHHHHHHHcCCC-HHHeEEEeCCHHHHHHHHHCCCeEEEEChh
Confidence 9999999999999997 999999999999999999999999999876
No 92
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=99.75 E-value=2.2e-18 Score=158.72 Aligned_cols=104 Identities=14% Similarity=0.111 Sum_probs=92.6
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCc-hHHHHHHHHhhcCCCCcc---------cccceEE--eCCcCCCCCHHHHHH
Q 009774 400 EGEVFDDVPEALEKWHSLGTKVYIYSSG-SRLAQRLIFGNSNYGDLR---------KYLSGFF--DTAVGNKRETPSYVE 467 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~-~~~~~~~~l~~l~~~gl~---------~~fd~i~--~~~~~~KP~p~~~~~ 467 (526)
.+++|||+.++|+.|+++|++++|+||+ +...++..++.+ ++. ++|+.++ +.....||.|.++..
T Consensus 43 ~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~---~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~ 119 (174)
T TIGR01685 43 EVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTF---EITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQK 119 (174)
T ss_pred EEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhC---CcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHH
Confidence 3479999999999999999999999998 888889999999 888 9999988 344556778888888
Q ss_pred HHHHc--CCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCC
Q 009774 468 ITNSL--GVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPG 507 (526)
Q Consensus 468 ~~~~l--~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~ 507 (526)
+.+.+ +++ |++|+||||++.|+++|+++|+.++++.++.
T Consensus 120 ~~~~~~~gl~-p~e~l~VgDs~~di~aA~~aGi~~i~v~~g~ 160 (174)
T TIGR01685 120 VNKVDPSVLK-PAQILFFDDRTDNVREVWGYGVTSCYCPSGM 160 (174)
T ss_pred hhhcccCCCC-HHHeEEEcChhHhHHHHHHhCCEEEEcCCCc
Confidence 87777 897 9999999999999999999999999998863
No 93
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=99.75 E-value=1.8e-17 Score=157.34 Aligned_cols=100 Identities=14% Similarity=0.051 Sum_probs=85.3
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCC----------CHHHHHHH
Q 009774 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKR----------ETPSYVEI 468 (526)
Q Consensus 401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP----------~p~~~~~~ 468 (526)
++++||+.++|+.|+++|++++|+||+....++.+++.+ |+..+|+..+ +..+..|| +++.+.++
T Consensus 79 ~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~---g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~ 155 (201)
T TIGR01491 79 ISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKL---NPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERL 155 (201)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHh---CCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHHH
Confidence 479999999999999999999999999999999999999 8888887655 22332233 33688999
Q ss_pred HHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEe
Q 009774 469 TNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISI 504 (526)
Q Consensus 469 ~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~ 504 (526)
+++++++ |++|+||||+.+|+.+|+.+|+.++...
T Consensus 156 ~~~~~~~-~~~~i~iGDs~~D~~~a~~ag~~~a~~~ 190 (201)
T TIGR01491 156 KRELNPS-LTETVAVGDSKNDLPMFEVADISISLGD 190 (201)
T ss_pred HHHhCCC-HHHEEEEcCCHhHHHHHHhcCCeEEECC
Confidence 9999997 9999999999999999999999776543
No 94
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=99.72 E-value=2.6e-17 Score=151.43 Aligned_cols=94 Identities=16% Similarity=0.263 Sum_probs=80.9
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHH------------HHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHH
Q 009774 403 VFDDVPEALEKWHSLGTKVYIYSSGSRL------------AQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEI 468 (526)
Q Consensus 403 l~pgv~~~L~~L~~~G~~l~vvTn~~~~------------~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~ 468 (526)
+|||+.++|+.|+++|++++|+||++.. .++..++++ |+.. +.++ +.....||+|++|+.+
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~---gl~~--~~ii~~~~~~~~KP~p~~~~~~ 117 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKL---KVPI--QVLAATHAGLYRKPMTGMWEYL 117 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHc---CCCE--EEEEecCCCCCCCCccHHHHHH
Confidence 7899999999999999999999998863 456788988 7743 3444 3344579999999999
Q ss_pred HHHcC--CCCCCcEEEEecCH--------hhHHHHHHcCCcEEE
Q 009774 469 TNSLG--VDKPSEILFVTDVY--------QEATAAKAAGLEVVI 502 (526)
Q Consensus 469 ~~~l~--~~~p~~~l~VgDs~--------~Di~~A~~aG~~~i~ 502 (526)
+++++ ++ |++|+||||+. .|+++|+++|+.++|
T Consensus 118 ~~~~~~~~~-~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~~ 160 (166)
T TIGR01664 118 QSQYNSPIK-MTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFKY 160 (166)
T ss_pred HHHcCCCCC-chhcEEEECCCCCCCCCchhHHHHHHHCCCCcCC
Confidence 99999 97 99999999996 699999999999875
No 95
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=99.71 E-value=2.4e-16 Score=152.36 Aligned_cols=95 Identities=13% Similarity=0.137 Sum_probs=81.0
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCc----hHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCC
Q 009774 401 GEVFDDVPEALEKWHSLGTKVYIYSSG----SRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGV 474 (526)
Q Consensus 401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~----~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~ 474 (526)
..+++++.++|+.|+++|++++++||. .....+.+++.+ |+.++|+.++ +.....||+|.. +++++++
T Consensus 113 s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~l---Gi~~~f~~i~~~d~~~~~Kp~~~~---~l~~~~i 186 (237)
T TIGR01672 113 SIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNF---HIPAMNPVIFAGDKPGQYQYTKTQ---WIQDKNI 186 (237)
T ss_pred CcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHh---CCchheeEEECCCCCCCCCCCHHH---HHHhCCC
Confidence 357788999999999999999999998 667888889999 9999999888 344556787753 4555554
Q ss_pred CCCCcEEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774 475 DKPSEILFVTDVYQEATAAKAAGLEVVISIRP 506 (526)
Q Consensus 475 ~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~ 506 (526)
|+||||+.+|+.+|+++|+++|.+.|+
T Consensus 187 -----~i~vGDs~~DI~aAk~AGi~~I~V~~g 213 (237)
T TIGR01672 187 -----RIHYGDSDNDITAAKEAGARGIRILRA 213 (237)
T ss_pred -----eEEEeCCHHHHHHHHHCCCCEEEEEec
Confidence 799999999999999999999999998
No 96
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=99.68 E-value=4.6e-16 Score=143.99 Aligned_cols=95 Identities=12% Similarity=0.160 Sum_probs=83.1
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCch-HHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcE
Q 009774 402 EVFDDVPEALEKWHSLGTKVYIYSSGS-RLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEI 480 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~-~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~ 480 (526)
.+||++.++|+.|+++|++++|+||++ ......+++.+ ++..++ ...||+|++|..++++++++ |++|
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~---gl~~~~-------~~~KP~p~~~~~~l~~~~~~-~~~~ 111 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKAL---GIPVLP-------HAVKPPGCAFRRAHPEMGLT-SEQV 111 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHc---CCEEEc-------CCCCCChHHHHHHHHHcCCC-HHHE
Confidence 378999999999999999999999998 56666666777 654321 34699999999999999997 9999
Q ss_pred EEEecCH-hhHHHHHHcCCcEEEEeCCC
Q 009774 481 LFVTDVY-QEATAAKAAGLEVVISIRPG 507 (526)
Q Consensus 481 l~VgDs~-~Di~~A~~aG~~~i~v~~~~ 507 (526)
+||||+. .|+.+|+++||.+|++.++.
T Consensus 112 l~IGDs~~~Di~aA~~aGi~~i~v~~g~ 139 (170)
T TIGR01668 112 AVVGDRLFTDVMGGNRNGSYTILVEPLV 139 (170)
T ss_pred EEECCcchHHHHHHHHcCCeEEEEccCc
Confidence 9999998 79999999999999999884
No 97
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=99.66 E-value=3.4e-15 Score=137.31 Aligned_cols=185 Identities=16% Similarity=0.188 Sum_probs=128.0
Q ss_pred CCceEEEEeccccccccccccccchhhHHhhHHhhhhhhcCChh--hHHHHHHHHHHhHHhhhhccCCccCCCCCCCchH
Q 009774 282 LFPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAE--TQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKE 359 (526)
Q Consensus 282 ~~ikaVlFD~DGTL~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (526)
...+.++||+|+||++.+. .+.....+.+.+|+..+++.++ .......+...++..++ |... .+...+..
T Consensus 13 ~~~~~l~FDiDdtLYp~St---~i~~~~~~nI~~f~~eklgi~~e~a~~L~~~~yk~YG~t~a----GL~~-~~~~~d~d 84 (244)
T KOG3109|consen 13 PNYKCLFFDIDDTLYPLST---GIQLMMRNNIQEFFVEKLGISEEEAEELRESLYKEYGLTMA----GLKA-VGYIFDAD 84 (244)
T ss_pred ccceEEEEecccccccCch---hHHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHHHHhHHHH----HHHH-hcccCCHH
Confidence 4789999999999998763 2334555666677766665443 12222222232222211 1100 01111111
Q ss_pred HHHHHHHHHHHHHHhhhhcchhhHhhhHHHHHHhhhcccccCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhc
Q 009774 360 EVIAALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNS 439 (526)
Q Consensus 360 ~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~y~~~~~~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l 439 (526)
+..+.+-. ..... .++|-+-.+.+|-.|+.++ ..+.||+.+..+.+.++.+
T Consensus 85 eY~~~V~~--------------------------~LPlq-~LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~Lk~L 135 (244)
T KOG3109|consen 85 EYHRFVHG--------------------------RLPLQ-DLKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRILKKL 135 (244)
T ss_pred HHHHHhhc--------------------------cCcHh-hcCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHHHHHh
Confidence 11111111 00111 1467788899999999874 8999999999999999999
Q ss_pred CCCCcccccceEE--e------CCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774 440 NYGDLRKYLSGFF--D------TAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 506 (526)
Q Consensus 440 ~~~gl~~~fd~i~--~------~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~ 506 (526)
|+.++|+.++ + ....+||.++.|..+.+..|++.|.+++|++||.++|.+|++.||+++++.+.
T Consensus 136 ---GieDcFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~~~ 207 (244)
T KOG3109|consen 136 ---GIEDCFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLKTVLVGRE 207 (244)
T ss_pred ---ChHHhccceeEeeccCCCCCceeecCCHHHHHHHHHHhCCCCcCceEEEcCchhhHHHHHhccceeEEEEee
Confidence 9999999998 2 23457999999999999999966999999999999999999999999999876
No 98
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=99.65 E-value=2.6e-15 Score=144.89 Aligned_cols=99 Identities=12% Similarity=0.060 Sum_probs=79.0
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCccccc--ceEE--eCCcCCCCCHHH----------H
Q 009774 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL--SGFF--DTAVGNKRETPS----------Y 465 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~f--d~i~--~~~~~~KP~p~~----------~ 465 (526)
+..++||+.++|+.|+++|++++|+||+....++.+++++ ... ...+ +..+ +.....||+|.. .
T Consensus 72 ~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~-~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K 149 (219)
T PRK09552 72 TAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPK-EQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCK 149 (219)
T ss_pred CCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCc-CcEEEeEEEecCCeeEEeccCCccccccccCCCch
Confidence 3579999999999999999999999999999999999875 211 1222 2233 224456888765 3
Q ss_pred HHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEE
Q 009774 466 VEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV 501 (526)
Q Consensus 466 ~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i 501 (526)
..++++++.. +++|+||||+.+|+.+|+++|+..+
T Consensus 150 ~~~l~~~~~~-~~~~i~iGDs~~Di~aa~~Ag~~~a 184 (219)
T PRK09552 150 PSLIRKLSDT-NDFHIVIGDSITDLEAAKQADKVFA 184 (219)
T ss_pred HHHHHHhccC-CCCEEEEeCCHHHHHHHHHCCccee
Confidence 6799999997 9999999999999999999999433
No 99
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.65 E-value=1.2e-15 Score=154.42 Aligned_cols=115 Identities=17% Similarity=0.184 Sum_probs=91.7
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE------------eCCcCCCCCHHHHHH
Q 009774 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF------------DTAVGNKRETPSYVE 467 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~------------~~~~~~KP~p~~~~~ 467 (526)
+++++||+.++|+.|+++|++++|+|++.....+.+++++ ++...+...+ ......||+++.++.
T Consensus 179 ~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~L---gld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~ 255 (322)
T PRK11133 179 NLPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKL---RLDAAVANELEIMDGKLTGNVLGDIVDAQYKADTLTR 255 (322)
T ss_pred hCCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHc---CCCeEEEeEEEEECCEEEeEecCccCCcccHHHHHHH
Confidence 3579999999999999999999999999998888889988 7765443221 122346899999999
Q ss_pred HHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecC
Q 009774 468 ITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINS 522 (526)
Q Consensus 468 ~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~ 522 (526)
+++++|++ +++|++|||+.+|+.+++.||+..++ + ..+.....++..+++
T Consensus 256 la~~lgi~-~~qtIaVGDg~NDl~m~~~AGlgiA~-n---Akp~Vk~~Ad~~i~~ 305 (322)
T PRK11133 256 LAQEYEIP-LAQTVAIGDGANDLPMIKAAGLGIAY-H---AKPKVNEQAQVTIRH 305 (322)
T ss_pred HHHHcCCC-hhhEEEEECCHHHHHHHHHCCCeEEe-C---CCHHHHhhCCEEecC
Confidence 99999997 99999999999999999999997776 2 222223344666653
No 100
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=99.63 E-value=2e-15 Score=143.94 Aligned_cols=119 Identities=13% Similarity=0.109 Sum_probs=89.4
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--e-C---CcCCCCCHHHHHHHHHHcC
Q 009774 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--D-T---AVGNKRETPSYVEITNSLG 473 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~-~---~~~~KP~p~~~~~~~~~l~ 473 (526)
..+++||+.++|+.|+++ ++++|+||+....++..++++ ++..+|+..+ + + .+..+|.|.....++++++
T Consensus 66 ~~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~---gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~ 141 (205)
T PRK13582 66 TLDPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQL---GWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALK 141 (205)
T ss_pred hCCCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHc---CCchhhcceEEECCCCeEECccccccchHHHHHHHHH
Confidence 346899999999999999 999999999999999999999 8988887655 1 1 1122345556677888888
Q ss_pred CCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCC-CeEecCCCCC
Q 009774 474 VDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHG-FKTINSFAEI 526 (526)
Q Consensus 474 ~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~-~~~i~~l~eL 526 (526)
.. +++|+||||+.+|+.+++++|+.. .+.++ .......+ ..+++++.||
T Consensus 142 ~~-~~~~v~iGDs~~D~~~~~aa~~~v-~~~~~--~~~~~~~~~~~~~~~~~el 191 (205)
T PRK13582 142 SL-GYRVIAAGDSYNDTTMLGEADAGI-LFRPP--ANVIAEFPQFPAVHTYDEL 191 (205)
T ss_pred Hh-CCeEEEEeCCHHHHHHHHhCCCCE-EECCC--HHHHHhCCcccccCCHHHH
Confidence 86 999999999999999999999854 33332 11111222 3367777653
No 101
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=99.62 E-value=1e-15 Score=153.15 Aligned_cols=119 Identities=13% Similarity=0.156 Sum_probs=93.3
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHHHHH-HHHhhcCCCCcccccceEE-----eCCcCCCCCHHHHHHHHHHcCCCC
Q 009774 403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQR-LIFGNSNYGDLRKYLSGFF-----DTAVGNKRETPSYVEITNSLGVDK 476 (526)
Q Consensus 403 l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~-~~l~~l~~~gl~~~fd~i~-----~~~~~~KP~p~~~~~~~~~l~~~~ 476 (526)
-|+++.++|+.|+++|+ ++|+||.+..... ..+... ++..+|+.+. +....+||+|.+|..++++++++
T Consensus 144 ~y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~~---~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~- 218 (279)
T TIGR01452 144 SYAKLREACAHLREPGC-LFVATNRDPWHPLSDGSRTP---GTGSLVAAIETASGRQPLVVGKPSPYMFECITENFSID- 218 (279)
T ss_pred CHHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCccc---ChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHhCCC-
Confidence 48899999999998887 8999999874421 122233 6666676654 12345799999999999999997
Q ss_pred CCcEEEEecCH-hhHHHHHHcCCcEEEEeCC-CCCCCCC---------CCCCeEecCCCCC
Q 009774 477 PSEILFVTDVY-QEATAAKAAGLEVVISIRP-GNGPLPE---------NHGFKTINSFAEI 526 (526)
Q Consensus 477 p~~~l~VgDs~-~Di~~A~~aG~~~i~v~~~-~~~~~~~---------~~~~~~i~~l~eL 526 (526)
|++|+||||+. .||.+|+++||++|+|.+| +.....+ ..++++++++.||
T Consensus 219 ~~~~lmIGD~~~tDI~~A~~aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~l 279 (279)
T TIGR01452 219 PARTLMVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLADL 279 (279)
T ss_pred hhhEEEECCChHHHHHHHHHcCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEecccccC
Confidence 99999999996 9999999999999999998 3322221 2459999999886
No 102
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=99.61 E-value=7.5e-15 Score=137.63 Aligned_cols=92 Identities=9% Similarity=0.111 Sum_probs=77.9
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeC----------------------CcCC
Q 009774 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDT----------------------AVGN 458 (526)
Q Consensus 401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~----------------------~~~~ 458 (526)
.+++||+.++|+.|+++|++++|+||+....++..++++ ++.++|+.++.. ....
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~---~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g 147 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGI---GEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCG 147 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHc---CChhheeEEeccCceECCCCcEEEecCCCCccCcCCCC
Confidence 479999999999999999999999999999999999999 999999988821 1122
Q ss_pred CCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCc
Q 009774 459 KRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLE 499 (526)
Q Consensus 459 KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~ 499 (526)
.++++.+.+++++. |++|+||||+.+|+.+|+++++-
T Consensus 148 ~~K~~~~~~~~~~~----~~~~i~iGD~~~D~~aa~~~d~~ 184 (188)
T TIGR01489 148 CCKGKVIHKLSEPK----YQHIIYIGDGVTDVCPAKLSDVV 184 (188)
T ss_pred CCHHHHHHHHHhhc----CceEEEECCCcchhchHhcCCcc
Confidence 34577888877654 67899999999999999999764
No 103
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=99.59 E-value=9.6e-15 Score=128.37 Aligned_cols=98 Identities=29% Similarity=0.351 Sum_probs=88.6
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeC--CcCC----------------CCCHH
Q 009774 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDT--AVGN----------------KRETP 463 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~--~~~~----------------KP~p~ 463 (526)
.++|++.++|+.|+++|++++++||+....++..++.+ ++..+|+.++.. .... ||++.
T Consensus 24 ~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (139)
T cd01427 24 ELYPGVKEALKELKEKGIKLALATNKSRREVLELLEEL---GLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPD 100 (139)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHc---CCchhhhheeccchhhhhcccccccccccccccCCCCHH
Confidence 58899999999999999999999999999999999999 888888888822 2222 99999
Q ss_pred HHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEE
Q 009774 464 SYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVIS 503 (526)
Q Consensus 464 ~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v 503 (526)
.+..+++.++.+ ++++++|||+.+|+.+|+++|+.++++
T Consensus 101 ~~~~~~~~~~~~-~~~~~~igD~~~d~~~~~~~g~~~i~v 139 (139)
T cd01427 101 KLLAALKLLGVD-PEEVLMVGDSLNDIEMAKAAGGLGVAV 139 (139)
T ss_pred HHHHHHHHcCCC-hhhEEEeCCCHHHHHHHHHcCCceeeC
Confidence 999999999997 999999999999999999999999874
No 104
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=99.58 E-value=1.5e-15 Score=149.86 Aligned_cols=120 Identities=13% Similarity=0.114 Sum_probs=97.4
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCC---cCCCCCHHHHHHHHHHcCCCCC
Q 009774 403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTA---VGNKRETPSYVEITNSLGVDKP 477 (526)
Q Consensus 403 l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~---~~~KP~p~~~~~~~~~l~~~~p 477 (526)
.|+++.+.++.|++.+++++++||.+..........+ |+..+|+.+. ... ...||+|++|+.++++++++ |
T Consensus 121 ~y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~---g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~-~ 196 (257)
T TIGR01458 121 SYQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLAL---DVGPFVTALEYATDTKATVVGKPSKTFFLEALRATGCE-P 196 (257)
T ss_pred CHHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCC---CchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCC-h
Confidence 4678899999999999999999999887766556666 7888888766 121 23699999999999999997 9
Q ss_pred CcEEEEecCH-hhHHHHHHcCCcEEEEeCCC-CCC---CCCCCCCeEecCCCCC
Q 009774 478 SEILFVTDVY-QEATAAKAAGLEVVISIRPG-NGP---LPENHGFKTINSFAEI 526 (526)
Q Consensus 478 ~~~l~VgDs~-~Di~~A~~aG~~~i~v~~~~-~~~---~~~~~~~~~i~~l~eL 526 (526)
++|+||||+. +|+.+|+++|++++++.+|. ... .....++++++++.||
T Consensus 197 ~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el 250 (257)
T TIGR01458 197 EEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHA 250 (257)
T ss_pred hhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEECCHHHH
Confidence 9999999996 89999999999999999873 222 1233458899988764
No 105
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=99.58 E-value=3e-14 Score=137.65 Aligned_cols=96 Identities=11% Similarity=0.138 Sum_probs=78.7
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCc----hHHHHHHHHhhcCCCCc--ccccceEEeCCcCCCCCHHHHHHHHHHcC
Q 009774 400 EGEVFDDVPEALEKWHSLGTKVYIYSSG----SRLAQRLIFGNSNYGDL--RKYLSGFFDTAVGNKRETPSYVEITNSLG 473 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~----~~~~~~~~l~~l~~~gl--~~~fd~i~~~~~~~KP~p~~~~~~~~~l~ 473 (526)
...|+||+.++|+.|+++|++++++||. .....+.+++.+ |+ .++|+.++......||++.. .+++++
T Consensus 112 ~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~---gip~~~~f~vil~gd~~~K~~K~~---~l~~~~ 185 (237)
T PRK11009 112 FSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDF---HIPADNMNPVIFAGDKPGQYTKTQ---WLKKKN 185 (237)
T ss_pred cCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHc---CCCcccceeEEEcCCCCCCCCHHH---HHHhcC
Confidence 3579999999999999999999999995 455677777778 88 88998888322236887754 445444
Q ss_pred CCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774 474 VDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 506 (526)
Q Consensus 474 ~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~ 506 (526)
+ ++||||+.+|+.+|++||+++|.+.|+
T Consensus 186 i-----~I~IGDs~~Di~aA~~AGi~~I~v~~G 213 (237)
T PRK11009 186 I-----RIFYGDSDNDITAAREAGARGIRILRA 213 (237)
T ss_pred C-----eEEEcCCHHHHHHHHHcCCcEEEEecC
Confidence 4 899999999999999999999999998
No 106
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=99.56 E-value=1.3e-14 Score=127.79 Aligned_cols=87 Identities=18% Similarity=0.221 Sum_probs=76.8
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCc-hHHHHHHHHhhcCCCC-------cccccceEEeCCcCCCCCHHHHHHHHHHcC-
Q 009774 403 VFDDVPEALEKWHSLGTKVYIYSSG-SRLAQRLIFGNSNYGD-------LRKYLSGFFDTAVGNKRETPSYVEITNSLG- 473 (526)
Q Consensus 403 l~pgv~~~L~~L~~~G~~l~vvTn~-~~~~~~~~l~~l~~~g-------l~~~fd~i~~~~~~~KP~p~~~~~~~~~l~- 473 (526)
+|||+.++|+.|+++|++++|+||+ ........++.+ + +.++|+.++.. ..||+|++|+++++++|
T Consensus 30 ~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~---~~~~~i~~l~~~f~~~~~~--~~~pkp~~~~~a~~~lg~ 104 (128)
T TIGR01681 30 TIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIF---EDFGIIFPLAEYFDPLTIG--YWLPKSPRLVEIALKLNG 104 (128)
T ss_pred HHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhc---cccccchhhHhhhhhhhhc--CCCcHHHHHHHHHHHhcC
Confidence 7899999999999999999999999 888888888888 6 78888877632 24699999999999999
Q ss_pred -CCCCCcEEEEecCHhhHHHHHH
Q 009774 474 -VDKPSEILFVTDVYQEATAAKA 495 (526)
Q Consensus 474 -~~~p~~~l~VgDs~~Di~~A~~ 495 (526)
+. |++|+||||+..|+...++
T Consensus 105 ~~~-p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 105 VLK-PKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred CCC-cceEEEECCCHhHHHHHHh
Confidence 97 9999999999999877654
No 107
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=99.53 E-value=9.6e-14 Score=133.45 Aligned_cols=94 Identities=14% Similarity=0.104 Sum_probs=78.5
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCccccc---ceEEe--CCcCCCCCHHHH----------
Q 009774 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL---SGFFD--TAVGNKRETPSY---------- 465 (526)
Q Consensus 401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~f---d~i~~--~~~~~KP~p~~~---------- 465 (526)
..++||+.++|+.|+++|++++|+|++....++.+++.+ +....| +..++ .....||+|..+
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~---~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K 145 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGI---VEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCK 145 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhh---CCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCH
Confidence 479999999999999999999999999999999999987 443443 23332 234568888876
Q ss_pred HHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCC
Q 009774 466 VEITNSLGVDKPSEILFVTDVYQEATAAKAAGL 498 (526)
Q Consensus 466 ~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~ 498 (526)
..++++++.. +++|+||||+.+|+.+|+.||+
T Consensus 146 ~~~l~~~~~~-~~~~i~iGDg~~D~~~a~~Ad~ 177 (214)
T TIGR03333 146 PSLIRKLSEP-NDYHIVIGDSVTDVEAAKQSDL 177 (214)
T ss_pred HHHHHHHhhc-CCcEEEEeCCHHHHHHHHhCCe
Confidence 4788888886 9999999999999999999998
No 108
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.53 E-value=1.7e-14 Score=132.54 Aligned_cols=85 Identities=20% Similarity=0.308 Sum_probs=77.4
Q ss_pred HHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHh
Q 009774 409 EALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQ 488 (526)
Q Consensus 409 ~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~ 488 (526)
..++.|+++|++++|+||++...++..++.+ ++..+|+.+ ||+|+.|+.++++++++ |++|++|||+.+
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~l---gi~~~f~~~-------kpkp~~~~~~~~~l~~~-~~ev~~iGD~~n 109 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEEL---KIKRFHEGI-------KKKTEPYAQMLEEMNIS-DAEVCYVGDDLV 109 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHC---CCcEEEecC-------CCCHHHHHHHHHHcCcC-HHHEEEECCCHH
Confidence 4677888999999999999999999999999 898887643 89999999999999997 999999999999
Q ss_pred hHHHHHHcCCcEEEEe
Q 009774 489 EATAAKAAGLEVVISI 504 (526)
Q Consensus 489 Di~~A~~aG~~~i~v~ 504 (526)
|+.+++.+|+..+.-+
T Consensus 110 Di~~~~~ag~~~am~n 125 (169)
T TIGR02726 110 DLSMMKRVGLAVAVGD 125 (169)
T ss_pred HHHHHHHCCCeEECcC
Confidence 9999999999877544
No 109
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.52 E-value=1.5e-14 Score=131.65 Aligned_cols=85 Identities=13% Similarity=0.182 Sum_probs=76.7
Q ss_pred HHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhh
Q 009774 410 ALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQE 489 (526)
Q Consensus 410 ~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~D 489 (526)
+|++|+++|++++|+||.+...+...++.+ |+..+|+. .||+|+.+++++++++++ |++|+||||+.+|
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~---gi~~~~~~-------~~~k~~~~~~~~~~~~~~-~~~~~~vGDs~~D 104 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTL---GITHLYQG-------QSNKLIAFSDILEKLALA-PENVAYIGDDLID 104 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHc---CCCEEEec-------ccchHHHHHHHHHHcCCC-HHHEEEECCCHHH
Confidence 899999999999999999999999999999 88877653 388999999999999997 9999999999999
Q ss_pred HHHHHHcCCcEEEEeCC
Q 009774 490 ATAAKAAGLEVVISIRP 506 (526)
Q Consensus 490 i~~A~~aG~~~i~v~~~ 506 (526)
+.+++++|+. +.+...
T Consensus 105 ~~~~~~ag~~-~~v~~~ 120 (154)
T TIGR01670 105 WPVMEKVGLS-VAVADA 120 (154)
T ss_pred HHHHHHCCCe-EecCCc
Confidence 9999999997 555543
No 110
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.52 E-value=2.3e-13 Score=130.08 Aligned_cols=89 Identities=26% Similarity=0.335 Sum_probs=79.0
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE-eCCcCCCCCHHHHHHHHHHcCCCCCCc
Q 009774 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF-DTAVGNKRETPSYVEITNSLGVDKPSE 479 (526)
Q Consensus 401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~-~~~~~~KP~p~~~~~~~~~l~~~~p~~ 479 (526)
.+++|++.++|+.|+++|++++++|+.+......+.+.+ |+. +.++ .... .||++.+|..++++++++ +++
T Consensus 126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~l---gi~---~~~v~a~~~-~kP~~k~~~~~i~~l~~~-~~~ 197 (215)
T PF00702_consen 126 DPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQL---GIF---DSIVFARVI-GKPEPKIFLRIIKELQVK-PGE 197 (215)
T ss_dssp EEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHT---TSC---SEEEEESHE-TTTHHHHHHHHHHHHTCT-GGG
T ss_pred CcchhhhhhhhhhhhccCcceeeeecccccccccccccc---ccc---ccccccccc-ccccchhHHHHHHHHhcC-CCE
Confidence 478999999999999999999999999999999999999 873 3222 2211 799999999999999997 999
Q ss_pred EEEEecCHhhHHHHHHcC
Q 009774 480 ILFVTDVYQEATAAKAAG 497 (526)
Q Consensus 480 ~l~VgDs~~Di~~A~~aG 497 (526)
|+||||+.+|+.++++||
T Consensus 198 v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 198 VAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp EEEEESSGGHHHHHHHSS
T ss_pred EEEEccCHHHHHHHHhCc
Confidence 999999999999999997
No 111
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=99.50 E-value=8.6e-14 Score=123.29 Aligned_cols=90 Identities=13% Similarity=0.201 Sum_probs=79.3
Q ss_pred CCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEe
Q 009774 405 DDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVT 484 (526)
Q Consensus 405 pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~Vg 484 (526)
|.+.+-+..++++|+++.|+||+++..+....+++ |+. .++ ...||-+..|.+++++++++ |++|+|||
T Consensus 49 pe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l---~v~----fi~---~A~KP~~~~fr~Al~~m~l~-~~~vvmVG 117 (175)
T COG2179 49 PELRAWLAELKEAGIKVVVVSNNKESRVARAAEKL---GVP----FIY---RAKKPFGRAFRRALKEMNLP-PEEVVMVG 117 (175)
T ss_pred HHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhc---CCc----eee---cccCccHHHHHHHHHHcCCC-hhHEEEEc
Confidence 45556677889999999999999999999889988 543 332 56799999999999999997 99999999
Q ss_pred cCH-hhHHHHHHcCCcEEEEeC
Q 009774 485 DVY-QEATAAKAAGLEVVISIR 505 (526)
Q Consensus 485 Ds~-~Di~~A~~aG~~~i~v~~ 505 (526)
|.. .||.+++.+||++|.|..
T Consensus 118 DqL~TDVlggnr~G~~tIlV~P 139 (175)
T COG2179 118 DQLFTDVLGGNRAGMRTILVEP 139 (175)
T ss_pred chhhhhhhcccccCcEEEEEEE
Confidence 999 899999999999999975
No 112
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=99.48 E-value=3e-13 Score=137.89 Aligned_cols=100 Identities=16% Similarity=0.121 Sum_probs=86.8
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCc---------------hHHHHHHHHhhcCCCCcccccceEE-e------CCcCC
Q 009774 401 GEVFDDVPEALEKWHSLGTKVYIYSSG---------------SRLAQRLIFGNSNYGDLRKYLSGFF-D------TAVGN 458 (526)
Q Consensus 401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~---------------~~~~~~~~l~~l~~~gl~~~fd~i~-~------~~~~~ 458 (526)
.++|||+.++|++|+++|++++|+||+ +......+++.+ ++. |+.++ + .....
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~---gl~--fd~i~i~~~~~sd~~~~r 103 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQ---GIK--FDEVLICPHFPEDNCSCR 103 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHc---CCc--eeeEEEeCCcCcccCCCC
Confidence 479999999999999999999999996 344566677887 773 77654 2 34577
Q ss_pred CCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774 459 KRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 506 (526)
Q Consensus 459 KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~ 506 (526)
||+|++|..++++++++ |++|+||||+.+|+++|+++||++|++++.
T Consensus 104 KP~p~~l~~a~~~l~v~-~~~svmIGDs~sDi~aAk~aGi~~I~v~~~ 150 (354)
T PRK05446 104 KPKTGLVEEYLAEGAID-LANSYVIGDRETDVQLAENMGIKGIRYARE 150 (354)
T ss_pred CCCHHHHHHHHHHcCCC-cccEEEEcCCHHHHHHHHHCCCeEEEEECC
Confidence 99999999999999997 999999999999999999999999999764
No 113
>KOG3699 consensus Cytoskeletal protein Adducin [Signal transduction mechanisms; Cytoskeleton]
Probab=99.46 E-value=1.8e-13 Score=142.32 Aligned_cols=157 Identities=15% Similarity=0.155 Sum_probs=116.2
Q ss_pred CCCCCCCCCCEEEEeCCCCcccCCCCCCCCCCCCCCCCchHHHHHHHHhc-CcceEEecCChHHHHHHhhcCCCCccccc
Q 009774 77 VQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRIT 155 (526)
Q Consensus 77 ~~~~~l~~~div~vd~dg~~~~g~~~~p~~~~p~~~S~E~~lH~~iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~ 155 (526)
..+.++|.+.+++|+..|++++.+..+-.. + .+-+.+|.+||.+| ||+||||.|.+...|.+.+.++ .+|++
T Consensus 87 ~~~he~tas~l~kv~~~g~iv~qgs~~~~v----n-~sgf~lhsai~~a~p~vrc~ihi~t~~~aavs~mk~g--llp~s 159 (598)
T KOG3699|consen 87 LLYHEITASSLVKVNIQGEIVDQGSTNLGV----N-QSGFFLHSAIYAARPDVRCIIHIHTSAVAAVSSMKCG--LLPLS 159 (598)
T ss_pred hhhhhcccccceeecccchhhhcccccccc----c-ccccchhhhhhccCCceeEEEEeccchHHHHHHhhhc--ccccc
Confidence 778899999999999999999754222211 1 34589999999999 9999999999999999998773 45555
Q ss_pred HHHHHhhhcCCcccCccceeeecCCCCchHHH--HHHHHHHhhCCCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHH
Q 009774 156 HMEMIKGIKGHGYYDELVVPIIENTAYENELT--DSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDA 233 (526)
Q Consensus 156 ~~~~~~~~~g~~~~~~~~vpv~~~~~~~~~la--~~i~~~l~~~~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~ 233 (526)
+..+. + | .|.+.+|.+.-.+-. ..+...|+. +++++|+|||++++|+|++|||+.+..+.-+|++
T Consensus 160 ~~a~~--l-g-------~~~~~dy~~~~e~~~~~~~~~~~lg~---~kvl~lrN~g~~~~g~t~eeA~~~~~~~~~ace~ 226 (598)
T KOG3699|consen 160 QEALV--L-G-------EVAYYDYQGILEDEEERIPLQKNLGP---KKVLVLRNHGVVSVGETVEEAFYYIFNLVLACEI 226 (598)
T ss_pred ccccc--c-c-------ceeeeecccccccchhhhhHHhhcCc---cceEEEecccccccchhHHHHHHHhhcchhhhhh
Confidence 54332 2 3 377777765322222 234445553 3999999999999999999999999999999999
Q ss_pred HHHHHhCCCCC-CCCCCCccc
Q 009774 234 AIKLHQLGLDW-STPNHGPTR 253 (526)
Q Consensus 234 ~~~a~~~g~~~-~~~~~~~~~ 253 (526)
++.+.+-|-.. .+++.+..+
T Consensus 227 qv~~~a~g~dnl~~~~~~~~~ 247 (598)
T KOG3699|consen 227 QVSASAGGLDNLILLEEEKYK 247 (598)
T ss_pred hhhhcccCccccccCcHhhhh
Confidence 99966656443 334553333
No 114
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=99.45 E-value=1.3e-12 Score=124.19 Aligned_cols=97 Identities=7% Similarity=0.106 Sum_probs=82.4
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccce-EE--eC----------CcCCCCCHHHHHHH
Q 009774 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSG-FF--DT----------AVGNKRETPSYVEI 468 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~-i~--~~----------~~~~KP~p~~~~~~ 468 (526)
.++|++.++|+.++++|++++|+||++...++.+++++ |+..+|.. +. ++ ...+++++..++..
T Consensus 87 ~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~l---g~~~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~~ 163 (202)
T TIGR01490 87 ILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARIL---GIDNAIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAEL 163 (202)
T ss_pred hccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHc---CCcceEecceEEcCCCEEeCCccCCCCCChHHHHHHHHH
Confidence 68999999999999999999999999999999999999 88877755 21 11 11235567778999
Q ss_pred HHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 009774 469 TNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVI 502 (526)
Q Consensus 469 ~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~ 502 (526)
+++.+++ +++|++||||.+|+..++.+|..++.
T Consensus 164 ~~~~~~~-~~~~~~~gDs~~D~~~~~~a~~~~~v 196 (202)
T TIGR01490 164 LAEEQID-LKDSYAYGDSISDLPLLSLVGHPYVV 196 (202)
T ss_pred HHHcCCC-HHHcEeeeCCcccHHHHHhCCCcEEe
Confidence 9999997 99999999999999999999987654
No 115
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=99.45 E-value=1.8e-12 Score=120.40 Aligned_cols=92 Identities=13% Similarity=0.094 Sum_probs=76.4
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--e-C-----------CcCCCCCHHHHH
Q 009774 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--D-T-----------AVGNKRETPSYV 466 (526)
Q Consensus 401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~-~-----------~~~~KP~p~~~~ 466 (526)
..++||+.++|+.++++|++++|+|++....++.+++++ |+..+|...+ + + ......++..+.
T Consensus 72 ~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~---g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~ 148 (177)
T TIGR01488 72 VALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKL---GIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLK 148 (177)
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHc---CCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHH
Confidence 458899999999999999999999999999999999999 8887776544 1 1 111233467888
Q ss_pred HHHHHcCCCCCCcEEEEecCHhhHHHHHHc
Q 009774 467 EITNSLGVDKPSEILFVTDVYQEATAAKAA 496 (526)
Q Consensus 467 ~~~~~l~~~~p~~~l~VgDs~~Di~~A~~a 496 (526)
..+++++++ +++|++|||+.+|+.+++.+
T Consensus 149 ~~~~~~~~~-~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 149 ELLEESKIT-LKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHhCCC-HHHEEEEeCCHHHHHHHhcC
Confidence 889999997 99999999999999998754
No 116
>PRK10444 UMP phosphatase; Provisional
Probab=99.42 E-value=2.9e-13 Score=132.71 Aligned_cols=71 Identities=18% Similarity=0.059 Sum_probs=59.8
Q ss_pred CcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCH-hhHHHHHHcCCcEEEEeCC-CCCCCC---CCCCCeEecCCCCC
Q 009774 455 AVGNKRETPSYVEITNSLGVDKPSEILFVTDVY-QEATAAKAAGLEVVISIRP-GNGPLP---ENHGFKTINSFAEI 526 (526)
Q Consensus 455 ~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~-~Di~~A~~aG~~~i~v~~~-~~~~~~---~~~~~~~i~~l~eL 526 (526)
...+||+|++|..++++++++ |++|+||||+. +|+.+|+++|++++++.+| ...... ...++++++|+.||
T Consensus 170 ~~~gKP~~~~~~~~~~~~~~~-~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~el 245 (248)
T PRK10444 170 FYVGKPSPWIIRAALNKMQAH-SEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDSMPFRPSWIYPSVADI 245 (248)
T ss_pred cccCCCCHHHHHHHHHHcCCC-cccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhcCCCCCCEEECCHHHh
Confidence 345799999999999999997 99999999997 8999999999999999988 332222 23458999998775
No 117
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=99.41 E-value=5.8e-13 Score=134.74 Aligned_cols=102 Identities=14% Similarity=0.050 Sum_probs=93.1
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCccc-ccceEE--e-------CCcCCCCCHHHHHHHHHH
Q 009774 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK-YLSGFF--D-------TAVGNKRETPSYVEITNS 471 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~-~fd~i~--~-------~~~~~KP~p~~~~~~~~~ 471 (526)
.++|++.++|+.|+++|++++++||.+....+..++.+ ++.+ +|+.++ + .....||+|+++..++++
T Consensus 187 ~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l---~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~ 263 (300)
T PHA02530 187 KPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWL---RQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWE 263 (300)
T ss_pred CCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHH---HHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHH
Confidence 68999999999999999999999999999999999999 8886 899887 3 234679999999999999
Q ss_pred cCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774 472 LGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 506 (526)
Q Consensus 472 l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~ 506 (526)
++.++|++|+||||+..|+++|+++||.+|+|.||
T Consensus 264 ~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~~g 298 (300)
T PHA02530 264 KIAPKYDVLLAVDDRDQVVDMWRRIGLECWQVAPG 298 (300)
T ss_pred HhccCceEEEEEcCcHHHHHHHHHhCCeEEEecCC
Confidence 98832799999999999999999999999999886
No 118
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=99.40 E-value=3.6e-13 Score=126.14 Aligned_cols=82 Identities=12% Similarity=0.221 Sum_probs=73.4
Q ss_pred HHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHh
Q 009774 409 EALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQ 488 (526)
Q Consensus 409 ~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~ 488 (526)
..++.|+++|++++|+||.+...+...++.+ |+..+|+ ..+++++.++++++++|++ |++|+||||+.+
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~l---gl~~~f~-------g~~~k~~~l~~~~~~~gl~-~~ev~~VGDs~~ 123 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTL---GITHLYQ-------GQSNKLIAFSDLLEKLAIA-PEQVAYIGDDLI 123 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHc---CCceeec-------CCCcHHHHHHHHHHHhCCC-HHHEEEECCCHH
Confidence 4677788899999999999999999999999 8877665 3467789999999999997 999999999999
Q ss_pred hHHHHHHcCCcEE
Q 009774 489 EATAAKAAGLEVV 501 (526)
Q Consensus 489 Di~~A~~aG~~~i 501 (526)
|+.+|+++|+.++
T Consensus 124 D~~~a~~aG~~~~ 136 (183)
T PRK09484 124 DWPVMEKVGLSVA 136 (183)
T ss_pred HHHHHHHCCCeEe
Confidence 9999999999854
No 119
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=99.39 E-value=8.5e-13 Score=129.78 Aligned_cols=121 Identities=17% Similarity=0.129 Sum_probs=85.2
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCCCcE
Q 009774 403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPSEI 480 (526)
Q Consensus 403 l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p~~~ 480 (526)
.|+.....+..|+ +|.+ .++||.+.......--....+.+...+.... +.....||+|++|..++++++++ |++|
T Consensus 122 ~y~~l~~a~~~l~-~g~~-~i~tN~D~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~~~~~-~~~~ 198 (249)
T TIGR01457 122 DYEKFATATLAIR-KGAH-FIGTNGDLAIPTERGLLPGNGSLITVLEVATGVKPVYIGKPNAIIMEKAVEHLGTE-REET 198 (249)
T ss_pred CHHHHHHHHHHHH-CCCe-EEEECCCCCCCCCCCCCCCcHHHHHHHHHHhCCCccccCCChHHHHHHHHHHcCCC-cccE
Confidence 4566777777775 5776 8889987653311000011113333333333 33456799999999999999997 9999
Q ss_pred EEEecCH-hhHHHHHHcCCcEEEEeCCCC-CCCCC---CCCCeEecCCCCC
Q 009774 481 LFVTDVY-QEATAAKAAGLEVVISIRPGN-GPLPE---NHGFKTINSFAEI 526 (526)
Q Consensus 481 l~VgDs~-~Di~~A~~aG~~~i~v~~~~~-~~~~~---~~~~~~i~~l~eL 526 (526)
+||||+. +|+.+|+++|++++++.++.. ..... ..++++++++.|+
T Consensus 199 ~~VGD~~~~Di~~a~~~G~~~v~v~~G~~~~~~~~~~~~~pd~~v~~l~~~ 249 (249)
T TIGR01457 199 LMVGDNYLTDIRAGIDAGIDTLLVHTGVTKAEEVAGLPIAPTHVVSSLAEW 249 (249)
T ss_pred EEECCCchhhHHHHHHcCCcEEEEcCCCCCHHHHhcCCCCCCEEeCChhhC
Confidence 9999997 899999999999999999832 22221 3458999999875
No 120
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=99.36 E-value=3.1e-12 Score=130.48 Aligned_cols=90 Identities=13% Similarity=0.106 Sum_probs=83.0
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhh----cCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774 403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGN----SNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPS 478 (526)
Q Consensus 403 l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~----l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~ 478 (526)
+|||+.++|+.|+++|++++|+||++...+...+++ + ++.++|+.+.. ..||+|+.++.+++++|+. |+
T Consensus 32 ~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~---~~~~~f~~~~~---~~~pk~~~i~~~~~~l~i~-~~ 104 (320)
T TIGR01686 32 LHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFI---LQAEDFDARSI---NWGPKSESLRKIAKKLNLG-TD 104 (320)
T ss_pred cHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCcccc---CcHHHeeEEEE---ecCchHHHHHHHHHHhCCC-cC
Confidence 679999999999999999999999999999999998 7 88889988753 3799999999999999997 99
Q ss_pred cEEEEecCHhhHHHHHHcCCc
Q 009774 479 EILFVTDVYQEATAAKAAGLE 499 (526)
Q Consensus 479 ~~l~VgDs~~Di~~A~~aG~~ 499 (526)
+|+||||++.|+.++++++-.
T Consensus 105 ~~vfidD~~~d~~~~~~~lp~ 125 (320)
T TIGR01686 105 SFLFIDDNPAERANVKITLPV 125 (320)
T ss_pred cEEEECCCHHHHHHHHHHCCC
Confidence 999999999999999998764
No 121
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=99.34 E-value=3.4e-12 Score=136.42 Aligned_cols=90 Identities=20% Similarity=0.335 Sum_probs=77.6
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchH------------HHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHH
Q 009774 403 VFDDVPEALEKWHSLGTKVYIYSSGSR------------LAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEI 468 (526)
Q Consensus 403 l~pgv~~~L~~L~~~G~~l~vvTn~~~------------~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~ 468 (526)
+|||+.+.|+.|++.||+++|+||.+. ..+..+++.+ |+. |+.++ +....+||+|.++.++
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~l---gip--fdviia~~~~~~RKP~pGm~~~a 272 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKL---GVP--FQVFIAIGAGFYRKPLTGMWDHL 272 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHc---CCc--eEEEEeCCCCCCCCCCHHHHHHH
Confidence 689999999999999999999999877 3467788888 774 88776 3456789999999999
Q ss_pred HHHcC----CCCCCcEEEEecCHhhHHHHHHcCC
Q 009774 469 TNSLG----VDKPSEILFVTDVYQEATAAKAAGL 498 (526)
Q Consensus 469 ~~~l~----~~~p~~~l~VgDs~~Di~~A~~aG~ 498 (526)
+++++ ++ +++|+||||+..|+.+|+++|-
T Consensus 273 ~~~~~~~~~Id-~~~S~~VGDaagr~~~g~~ag~ 305 (526)
T TIGR01663 273 KEEANDGTEIQ-EDDCFFVGDAAGRPANGKAAGK 305 (526)
T ss_pred HHhcCcccCCC-HHHeEEeCCcccchHHHHhcCC
Confidence 99995 87 9999999999988888777765
No 122
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.34 E-value=1.3e-12 Score=117.99 Aligned_cols=93 Identities=18% Similarity=0.160 Sum_probs=82.4
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCccc-ccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK-YLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 477 (526)
Q Consensus 401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~-~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p 477 (526)
+.++||+.++|+.|+ ++++++|+||++...++.+++++ ++.. +|+.++ +++...||+ |++++++++++ |
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l---~~~~~~f~~i~~~~d~~~~KP~---~~k~l~~l~~~-p 115 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLL---DPKKYFGYRRLFRDECVFVKGK---YVKDLSLLGRD-L 115 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHh---CcCCCEeeeEEECccccccCCe---EeecHHHcCCC-h
Confidence 468999999999999 57999999999999999999999 7865 458877 456777886 99999999997 9
Q ss_pred CcEEEEecCHhhHHHHHHcCCcEE
Q 009774 478 SEILFVTDVYQEATAAKAAGLEVV 501 (526)
Q Consensus 478 ~~~l~VgDs~~Di~~A~~aG~~~i 501 (526)
++|+||||++.|+.+|+++|+..-
T Consensus 116 ~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 116 SNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred hcEEEEECCHHHhhcCccCEEEec
Confidence 999999999999999999988653
No 123
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.33 E-value=2.6e-11 Score=115.26 Aligned_cols=98 Identities=14% Similarity=0.081 Sum_probs=79.9
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eC-------CcCCCCCHHHHHHHHHH
Q 009774 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DT-------AVGNKRETPSYVEITNS 471 (526)
Q Consensus 401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~-------~~~~KP~p~~~~~~~~~ 471 (526)
++++||+.++|+.|+++| +++|+||+.....+.+++.+ |+..+|...+ ++ ....||.+..+.+.+++
T Consensus 67 i~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~l---gi~~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~ 142 (203)
T TIGR02137 67 LKPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQL---GFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKS 142 (203)
T ss_pred CCCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHc---CCchhhceeeEEecCCeeECeeecCcchHHHHHHHHHh
Confidence 469999999999999975 99999999999999999999 9988887322 21 11346777777776665
Q ss_pred cCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774 472 LGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 506 (526)
Q Consensus 472 l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~ 506 (526)
.+ .+|++|||+.+|+..++.+|+..++...+
T Consensus 143 ~~----~~~v~vGDs~nDl~ml~~Ag~~ia~~ak~ 173 (203)
T TIGR02137 143 LY----YRVIAAGDSYNDTTMLSEAHAGILFHAPE 173 (203)
T ss_pred hC----CCEEEEeCCHHHHHHHHhCCCCEEecCCH
Confidence 44 37999999999999999999998887654
No 124
>PLN02645 phosphoglycolate phosphatase
Probab=99.33 E-value=1.9e-12 Score=131.52 Aligned_cols=115 Identities=10% Similarity=0.044 Sum_probs=83.9
Q ss_pred HHHHHHHHHCCCeEEEEeCchHHH-HHHHHhhcCCCCcccccceEE--eC---CcCCCCCHHHHHHHHHHcCCCCCCcEE
Q 009774 408 PEALEKWHSLGTKVYIYSSGSRLA-QRLIFGNSNYGDLRKYLSGFF--DT---AVGNKRETPSYVEITNSLGVDKPSEIL 481 (526)
Q Consensus 408 ~~~L~~L~~~G~~l~vvTn~~~~~-~~~~l~~l~~~gl~~~fd~i~--~~---~~~~KP~p~~~~~~~~~l~~~~p~~~l 481 (526)
......|+.++-.++|+||.+... ....+... |...+|+.+. +. ...+||+|.+|..++++++++ +++|+
T Consensus 176 ~~a~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~---g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~a~~~~~~~-~~~~~ 251 (311)
T PLN02645 176 QYATLCIRENPGCLFIATNRDAVTHLTDAQEWA---GAGSMVGAIKGSTEREPLVVGKPSTFMMDYLANKFGIE-KSQIC 251 (311)
T ss_pred HHHHHHHhcCCCCEEEEeCCCCCCCCCCCCCcc---chHHHHHHHHHHhCCCcccCCCChHHHHHHHHHHcCCC-cccEE
Confidence 334556654322599999998743 22233344 6777788776 22 123599999999999999997 99999
Q ss_pred EEecCH-hhHHHHHHcCCcEEEEeCC-CCCCCC-----CCCCCeEecCCCCC
Q 009774 482 FVTDVY-QEATAAKAAGLEVVISIRP-GNGPLP-----ENHGFKTINSFAEI 526 (526)
Q Consensus 482 ~VgDs~-~Di~~A~~aG~~~i~v~~~-~~~~~~-----~~~~~~~i~~l~eL 526 (526)
||||++ +||.+|+++|+++|+|.+| ++.... ...++++++++.||
T Consensus 252 ~VGD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l 303 (311)
T PLN02645 252 MVGDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDF 303 (311)
T ss_pred EEcCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHH
Confidence 999998 9999999999999999988 332221 13358999887654
No 125
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=99.31 E-value=3.8e-12 Score=124.68 Aligned_cols=69 Identities=29% Similarity=0.352 Sum_probs=57.2
Q ss_pred CCCCCHHHHHHHHHHcCCCCCCcEEEEecCH-hhHHHHHHcCCcEEEEeCCCC-CCCC---CCCCCeEecCCCCC
Q 009774 457 GNKRETPSYVEITNSLGVDKPSEILFVTDVY-QEATAAKAAGLEVVISIRPGN-GPLP---ENHGFKTINSFAEI 526 (526)
Q Consensus 457 ~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~-~Di~~A~~aG~~~i~v~~~~~-~~~~---~~~~~~~i~~l~eL 526 (526)
.+||.|.+|..+++.++.+ +++|+||||+. +||.+|+++||.+++|..|-+ .... +..++++++|+.|+
T Consensus 188 ~GKP~~~i~~~al~~~~~~-~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~~~~~~~~~~p~~v~~sl~~~ 261 (269)
T COG0647 188 IGKPSPAIYEAALEKLGLD-RSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLDRAEVKPTYVVDSLAEL 261 (269)
T ss_pred cCCCCHHHHHHHHHHhCCC-cccEEEEcCCchhhHHHHHHcCCCEEEEccCCCChhhhhhhccCCcchHhhHHHH
Confidence 3599999999999999997 99999999999 899999999999999999833 2222 23347888877653
No 126
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.26 E-value=1.3e-10 Score=111.20 Aligned_cols=98 Identities=18% Similarity=0.216 Sum_probs=84.8
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCC---c-------CCCCCHHHHHHH
Q 009774 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTA---V-------GNKRETPSYVEI 468 (526)
Q Consensus 401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~---~-------~~KP~p~~~~~~ 468 (526)
.+++||+.++++.++++|++++|+|.+.....+.+.+.+ |+...+...+ ++. + ..+-+-.....+
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~l---g~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~ 152 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERL---GIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALREL 152 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHh---CCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHH
Confidence 579999999999999999999999999999999999999 9988887766 221 1 123356777889
Q ss_pred HHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 009774 469 TNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVI 502 (526)
Q Consensus 469 ~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~ 502 (526)
++.+|++ +++++.+|||.+|+..-..+|...++
T Consensus 153 ~~~~g~~-~~~~~a~gDs~nDlpml~~ag~~ia~ 185 (212)
T COG0560 153 AAELGIP-LEETVAYGDSANDLPMLEAAGLPIAV 185 (212)
T ss_pred HHHcCCC-HHHeEEEcCchhhHHHHHhCCCCeEe
Confidence 9999997 99999999999999999999988765
No 127
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=99.25 E-value=5e-11 Score=109.48 Aligned_cols=99 Identities=20% Similarity=0.245 Sum_probs=83.8
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCch---------------HHHHHHHHhhcCCCCcccccceEE-------eCCcCCC
Q 009774 402 EVFDDVPEALEKWHSLGTKVYIYSSGS---------------RLAQRLIFGNSNYGDLRKYLSGFF-------DTAVGNK 459 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~---------------~~~~~~~l~~l~~~gl~~~fd~i~-------~~~~~~K 459 (526)
++.||+.+.|..|++.||+++|+||.+ ...+...++.. |. .||.++ +.+..+|
T Consensus 31 ~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~---gv--~id~i~~Cph~p~~~c~cRK 105 (181)
T COG0241 31 QFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQ---GV--KIDGILYCPHHPEDNCDCRK 105 (181)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHc---CC--ccceEEECCCCCCCCCcccC
Confidence 588999999999999999999999964 11233344444 54 588887 2367889
Q ss_pred CCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774 460 RETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 506 (526)
Q Consensus 460 P~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~ 506 (526)
|.|.+|..++++++++ +++.++|||+.+|+++|.++|++.+.+.++
T Consensus 106 P~~gm~~~~~~~~~iD-~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~ 151 (181)
T COG0241 106 PKPGMLLSALKEYNID-LSRSYVVGDRLTDLQAAENAGIKGVLVLTG 151 (181)
T ss_pred CChHHHHHHHHHhCCC-ccceEEecCcHHHHHHHHHCCCCceEEEcC
Confidence 9999999999999998 999999999999999999999998888876
No 128
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=99.24 E-value=9.9e-12 Score=98.70 Aligned_cols=69 Identities=25% Similarity=0.291 Sum_probs=59.8
Q ss_pred CCCCCHHHHHHHHHHcCCCCCCcEEEEecC-HhhHHHHHHcCCcEEEEeCCC-CCCCC---CCCCCeEecCCCCC
Q 009774 457 GNKRETPSYVEITNSLGVDKPSEILFVTDV-YQEATAAKAAGLEVVISIRPG-NGPLP---ENHGFKTINSFAEI 526 (526)
Q Consensus 457 ~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs-~~Di~~A~~aG~~~i~v~~~~-~~~~~---~~~~~~~i~~l~eL 526 (526)
.+||+|.+|..++++++++ |++|+||||+ ..||.+|+++|+.+|+|.+|. ..... ...+++++++|.|+
T Consensus 2 ~gKP~p~~~~~a~~~~~~~-~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e~ 75 (75)
T PF13242_consen 2 CGKPSPGMLEQALKRLGVD-PSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKEA 75 (75)
T ss_dssp CSTTSHHHHHHHHHHHTSG-GGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGGH
T ss_pred CCCCcHHHHHHHHHHcCCC-HHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHHhC
Confidence 4799999999999999997 9999999999 699999999999999999983 33322 24559999999875
No 129
>PTZ00445 p36-lilke protein; Provisional
Probab=99.22 E-value=4.2e-11 Score=111.30 Aligned_cols=100 Identities=14% Similarity=0.158 Sum_probs=78.5
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHHH---------------HHHHHhhcCCCCcccccceEE-------eC------
Q 009774 403 VFDDVPEALEKWHSLGTKVYIYSSGSRLA---------------QRLIFGNSNYGDLRKYLSGFF-------DT------ 454 (526)
Q Consensus 403 l~pgv~~~L~~L~~~G~~l~vvTn~~~~~---------------~~~~l~~l~~~gl~~~fd~i~-------~~------ 454 (526)
+.|+...++++|++.|++++|||=++... ++..++.. +-.-....++ +.
T Consensus 76 ~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s---~~~~~i~~~~~yyp~~w~~p~~y~~ 152 (219)
T PTZ00445 76 VTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKKS---KCDFKIKKVYAYYPKFWQEPSDYRP 152 (219)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHhc---CccceeeeeeeeCCcccCChhhhhh
Confidence 55778889999999999999999987643 45555543 2222222222 11
Q ss_pred CcCCCCCHHH--H--HHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774 455 AVGNKRETPS--Y--VEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 506 (526)
Q Consensus 455 ~~~~KP~p~~--~--~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~ 506 (526)
.+..||+|++ | ++++++.|++ |++|+||+|+..++++|++.|+.++.+..+
T Consensus 153 ~gl~KPdp~iK~yHle~ll~~~gl~-peE~LFIDD~~~NVeaA~~lGi~ai~f~~~ 207 (219)
T PTZ00445 153 LGLDAPMPLDKSYHLKQVCSDFNVN-PDEILFIDDDMNNCKNALKEGYIALHVTGN 207 (219)
T ss_pred hcccCCCccchHHHHHHHHHHcCCC-HHHeEeecCCHHHHHHHHHCCCEEEEcCCh
Confidence 3556999999 9 9999999997 999999999999999999999999998754
No 130
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=99.19 E-value=3.9e-10 Score=110.86 Aligned_cols=93 Identities=15% Similarity=0.180 Sum_probs=81.6
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceE------E--eCCcCCCCCH---------
Q 009774 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGF------F--DTAVGNKRET--------- 462 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i------~--~~~~~~KP~p--------- 462 (526)
.+.+.||+.++|+.|+++|++++|+|++....++..++.+ |+.+.+..+ + +....+||.|
T Consensus 119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~l---gl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~ 195 (277)
T TIGR01544 119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQA---GVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNH 195 (277)
T ss_pred CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHc---CCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHH
Confidence 4679999999999999999999999999999999999999 887777777 3 2344568888
Q ss_pred HHHHHHHHHcC--CCCCCcEEEEecCHhhHHHHHHc
Q 009774 463 PSYVEITNSLG--VDKPSEILFVTDVYQEATAAKAA 496 (526)
Q Consensus 463 ~~~~~~~~~l~--~~~p~~~l~VgDs~~Di~~A~~a 496 (526)
..++.+++.++ .. +++|++|||+.+|+.+|..+
T Consensus 196 ~v~~~~~~~~~~~~~-~~~vI~vGDs~~Dl~ma~g~ 230 (277)
T TIGR01544 196 DVALRNTEYFNQLKD-RSNIILLGDSQGDLRMADGV 230 (277)
T ss_pred HHHHHHHHHhCccCC-cceEEEECcChhhhhHhcCC
Confidence 78888999998 76 99999999999999997766
No 131
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=99.18 E-value=8.9e-11 Score=107.30 Aligned_cols=100 Identities=21% Similarity=0.308 Sum_probs=73.9
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEe-CchHHHHHHHHhhcCCCCcc----------cccceEEeCCcCCCCCHHHHHHH
Q 009774 400 EGEVFDDVPEALEKWHSLGTKVYIYS-SGSRLAQRLIFGNSNYGDLR----------KYLSGFFDTAVGNKRETPSYVEI 468 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~~l~vvT-n~~~~~~~~~l~~l~~~gl~----------~~fd~i~~~~~~~KP~p~~~~~~ 468 (526)
.+.+||++.++|+.|+++|++++++| +...+.++..|+.+ ++. ++|+..- ...+ .+...|..+
T Consensus 43 ~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l---~i~~~~~~~~~~~~~F~~~e-I~~g--sK~~Hf~~i 116 (169)
T PF12689_consen 43 EVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLL---EIDDADGDGVPLIEYFDYLE-IYPG--SKTTHFRRI 116 (169)
T ss_dssp EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHT---T-C----------CCECEEE-ESSS---HHHHHHHH
T ss_pred EEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhc---CCCccccccccchhhcchhh-eecC--chHHHHHHH
Confidence 34799999999999999999999999 45677889999999 888 8887732 2222 557899999
Q ss_pred HHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774 469 TNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 506 (526)
Q Consensus 469 ~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~ 506 (526)
.++.|++ .++++|++|...+++...+.|+.++++.+|
T Consensus 117 ~~~tgI~-y~eMlFFDDe~~N~~~v~~lGV~~v~v~~G 153 (169)
T PF12689_consen 117 HRKTGIP-YEEMLFFDDESRNIEVVSKLGVTCVLVPDG 153 (169)
T ss_dssp HHHH----GGGEEEEES-HHHHHHHHTTT-EEEE-SSS
T ss_pred HHhcCCC-hhHEEEecCchhcceeeEecCcEEEEeCCC
Confidence 9999997 999999999999999999999999999886
No 132
>PRK08238 hypothetical protein; Validated
Probab=99.15 E-value=5.1e-10 Score=119.27 Aligned_cols=94 Identities=13% Similarity=0.185 Sum_probs=78.1
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCCCc
Q 009774 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPSE 479 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p~~ 479 (526)
+++||+.++|++++++|++++++||+++...+.+++++ |+ ||.++ +.....||+++.- .+.+.++ .++
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~l---Gl---Fd~Vigsd~~~~~kg~~K~~-~l~~~l~---~~~ 141 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHL---GL---FDGVFASDGTTNLKGAAKAA-ALVEAFG---ERG 141 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHc---CC---CCEEEeCCCccccCCchHHH-HHHHHhC---ccC
Confidence 57899999999999999999999999999999999999 76 88888 4455667766543 3445554 347
Q ss_pred EEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774 480 ILFVTDVYQEATAAKAAGLEVVISIRP 506 (526)
Q Consensus 480 ~l~VgDs~~Di~~A~~aG~~~i~v~~~ 506 (526)
++|+||+.+|+..++.+| +.+.|+.+
T Consensus 142 ~~yvGDS~~Dlp~~~~A~-~av~Vn~~ 167 (479)
T PRK08238 142 FDYAGNSAADLPVWAAAR-RAIVVGAS 167 (479)
T ss_pred eeEecCCHHHHHHHHhCC-CeEEECCC
Confidence 999999999999999999 77777754
No 133
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=99.10 E-value=5.4e-11 Score=116.58 Aligned_cols=97 Identities=11% Similarity=0.111 Sum_probs=81.0
Q ss_pred CCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceE--E--eCCcCCCCCHHHHHHHHHHcCCCCCCc
Q 009774 404 FDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGF--F--DTAVGNKRETPSYVEITNSLGVDKPSE 479 (526)
Q Consensus 404 ~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i--~--~~~~~~KP~p~~~~~~~~~l~~~~p~~ 479 (526)
||++.++|+.|+++|+++ |+||.+.......+..+ +...+|..+ . +....+||+|++|..++++++..++++
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~---~~g~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~ 215 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRY---GAGYYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNR 215 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEe---cccHHHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCccc
Confidence 689999999999899997 88999988776666666 666666654 2 334578999999999999999752579
Q ss_pred EEEEecCH-hhHHHHHHcCCcEEEEe
Q 009774 480 ILFVTDVY-QEATAAKAAGLEVVISI 504 (526)
Q Consensus 480 ~l~VgDs~-~Di~~A~~aG~~~i~v~ 504 (526)
|+||||+. +|+.+|+++|+.+++|.
T Consensus 216 ~~~vGD~~~~Di~~a~~~G~~~i~v~ 241 (242)
T TIGR01459 216 MLMVGDSFYTDILGANRLGIDTALVL 241 (242)
T ss_pred EEEECCCcHHHHHHHHHCCCeEEEEe
Confidence 99999995 99999999999999985
No 134
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=99.01 E-value=6.6e-10 Score=108.91 Aligned_cols=89 Identities=10% Similarity=0.088 Sum_probs=72.7
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHHHHH--HHHhhcCCCCccc-ccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCc
Q 009774 403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQR--LIFGNSNYGDLRK-YLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE 479 (526)
Q Consensus 403 l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~--~~l~~l~~~gl~~-~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~ 479 (526)
+|||+.++|++|+++|++++++||+++.... .+++++ |+.. +|+.++.+.... .+.+..+++++++. |++
T Consensus 25 ~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~---gl~~~~~~~Ii~s~~~~---~~~l~~~~~~~~~~-~~~ 97 (242)
T TIGR01459 25 TYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSL---GINADLPEMIISSGEIA---VQMILESKKRFDIR-NGI 97 (242)
T ss_pred cCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHC---CCCccccceEEccHHHH---HHHHHhhhhhccCC-Cce
Confidence 7899999999999999999999999887665 678888 9987 899988332111 14677788889997 999
Q ss_pred EEEEecCHhhHHHHHHcCC
Q 009774 480 ILFVTDVYQEATAAKAAGL 498 (526)
Q Consensus 480 ~l~VgDs~~Di~~A~~aG~ 498 (526)
|++|||+..|+......|.
T Consensus 98 ~~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 98 IYLLGHLENDIINLMQCYT 116 (242)
T ss_pred EEEeCCcccchhhhcCCCc
Confidence 9999999988887765554
No 135
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=99.00 E-value=7.5e-09 Score=105.06 Aligned_cols=104 Identities=16% Similarity=0.096 Sum_probs=84.5
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCC-----CCcccccceEEeC-C------------------cC
Q 009774 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNY-----GDLRKYLSGFFDT-A------------------VG 457 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~-----~gl~~~fd~i~~~-~------------------~~ 457 (526)
.++||+.++|++|+++|++++|+||++...++.+++.+-. .++.++||.++.. . +.
T Consensus 184 ~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~~~g~ 263 (343)
T TIGR02244 184 LRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDVETGS 263 (343)
T ss_pred ccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeCCCCc
Confidence 5789999999999999999999999999999999999521 2489999988821 1 01
Q ss_pred CCCCH------------HHHHHHHHHcCCCCCCcEEEEecCH-hhHHHHH-HcCCcEEEEeCC
Q 009774 458 NKRET------------PSYVEITNSLGVDKPSEILFVTDVY-QEATAAK-AAGLEVVISIRP 506 (526)
Q Consensus 458 ~KP~p------------~~~~~~~~~l~~~~p~~~l~VgDs~-~Di~~A~-~aG~~~i~v~~~ 506 (526)
.|+.. .......+.++++ +++|+||||+. .|+.+|+ .+||++++|.+.
T Consensus 264 ~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~-~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~pE 325 (343)
T TIGR02244 264 LKWGEVDGLEPGKVYSGGSLKQFHELLKWR-GKEVLYFGDHIYGDLLRSKKKRGWRTAAIIPE 325 (343)
T ss_pred ccCCccccccCCCeEeCCCHHHHHHHHCCC-CCcEEEECCcchHHHHhhHHhcCcEEEEEchh
Confidence 12221 1234578889997 99999999999 8999998 899999999875
No 136
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=98.99 E-value=4.3e-09 Score=101.35 Aligned_cols=103 Identities=17% Similarity=0.159 Sum_probs=79.9
Q ss_pred cCccCCCHHHHHHHH--HHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeC------Cc----------CCC--
Q 009774 400 EGEVFDDVPEALEKW--HSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDT------AV----------GNK-- 459 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L--~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~------~~----------~~K-- 459 (526)
.+++.||+.++++.+ ++.|+.+.|+|+++..+.+.+|++. |+...|+.|+.+ .+ ..+
T Consensus 69 ~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~---gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C 145 (234)
T PF06888_consen 69 SIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHH---GLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLC 145 (234)
T ss_pred cCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhC---CCccccceEEeCCceecCCceEEEeCccCCCCCcC
Confidence 457899999999999 4579999999999999999999999 999999988821 10 111
Q ss_pred C----CHHHHHHHHHH---cCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774 460 R----ETPSYVEITNS---LGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 506 (526)
Q Consensus 460 P----~p~~~~~~~~~---l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~ 506 (526)
| +-......++. -|+. -++++||||+.+|+-++.+.+-.=+...|.
T Consensus 146 ~~NmCK~~il~~~~~~~~~~g~~-~~rviYiGDG~nD~Cp~~~L~~~D~v~~R~ 198 (234)
T PF06888_consen 146 PPNMCKGKILERLLQEQAQRGVP-YDRVIYIGDGRNDFCPALRLRPRDVVFPRK 198 (234)
T ss_pred CCccchHHHHHHHHHHHhhcCCC-cceEEEECCCCCCcCcccccCCCCEEecCC
Confidence 2 23445555555 3675 789999999999999999988755555543
No 137
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=98.98 E-value=1.3e-09 Score=99.48 Aligned_cols=93 Identities=19% Similarity=0.215 Sum_probs=67.3
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCch---H-----------HHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHH
Q 009774 403 VFDDVPEALEKWHSLGTKVYIYSSGS---R-----------LAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYV 466 (526)
Q Consensus 403 l~pgv~~~L~~L~~~G~~l~vvTn~~---~-----------~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~ 466 (526)
+.|+|.+.|++|++.||+++|+||.. . ..+..+++.+ ++. +..++ .....+||.+.+++
T Consensus 30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l---~ip--~~~~~a~~~d~~RKP~~GM~~ 104 (159)
T PF08645_consen 30 FPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKEL---GIP--IQVYAAPHKDPCRKPNPGMWE 104 (159)
T ss_dssp C-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHC---TS---EEEEECGCSSTTSTTSSHHHH
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHc---CCc--eEEEecCCCCCCCCCchhHHH
Confidence 44689999999999999999999982 1 2344556666 554 22222 23467899999999
Q ss_pred HHHHHcCC----CCCCcEEEEecC-----------HhhHHHHHHcCCcEE
Q 009774 467 EITNSLGV----DKPSEILFVTDV-----------YQEATAAKAAGLEVV 501 (526)
Q Consensus 467 ~~~~~l~~----~~p~~~l~VgDs-----------~~Di~~A~~aG~~~i 501 (526)
.+++.++. + .++++||||+ -.|.+-|.++|++..
T Consensus 105 ~~~~~~~~~~~id-~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f~ 153 (159)
T PF08645_consen 105 FALKDYNDGVEID-LANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKFY 153 (159)
T ss_dssp HHCCCTSTT--S--CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--EE
T ss_pred HHHHhcccccccc-ccceEEEeccCCCCCcccccChhHHHHHHHcCCccc
Confidence 99999975 7 8999999996 579999999999854
No 138
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=98.97 E-value=2.5e-09 Score=104.40 Aligned_cols=50 Identities=24% Similarity=0.325 Sum_probs=46.0
Q ss_pred cCCCCCHHHHHHHHHHcCCCCCCcE-EEEecCH-hhHHHHHHcCCcEEEEeCC
Q 009774 456 VGNKRETPSYVEITNSLGVDKPSEI-LFVTDVY-QEATAAKAAGLEVVISIRP 506 (526)
Q Consensus 456 ~~~KP~p~~~~~~~~~l~~~~p~~~-l~VgDs~-~Di~~A~~aG~~~i~v~~~ 506 (526)
...||+|.+|..++++++++ ++++ +||||+. +||.+|+++|+++++|.+|
T Consensus 185 ~~~KP~~~~~~~~~~~~~~~-~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~G 236 (236)
T TIGR01460 185 VVGKPSPAIYRAALNLLQAR-PERRDVMVGDNLRTDILGAKNAGFDTLLVLTG 236 (236)
T ss_pred eecCCCHHHHHHHHHHhCCC-CccceEEECCCcHHHHHHHHHCCCcEEEEecC
Confidence 36799999999999999997 8887 9999998 8999999999999999874
No 139
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=98.94 E-value=4.3e-09 Score=95.92 Aligned_cols=90 Identities=16% Similarity=0.134 Sum_probs=64.1
Q ss_pred CCHHHHHHHHHHCCC--eEEEEeCch-------HHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcC--
Q 009774 405 DDVPEALEKWHSLGT--KVYIYSSGS-------RLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLG-- 473 (526)
Q Consensus 405 pgv~~~L~~L~~~G~--~l~vvTn~~-------~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~-- 473 (526)
|.+.+.++++++.+. ++.|+||+. ...++.+-+.+ |+. .+. ....|| ..+..+++.++
T Consensus 62 ~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~l---gIp----vl~--h~~kKP--~~~~~i~~~~~~~ 130 (168)
T PF09419_consen 62 PEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKAL---GIP----VLR--HRAKKP--GCFREILKYFKCQ 130 (168)
T ss_pred HHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhh---CCc----EEE--eCCCCC--ccHHHHHHHHhhc
Confidence 444455666666654 599999983 55666666777 542 111 124577 55666666664
Q ss_pred ---CCCCCcEEEEecCH-hhHHHHHHcCCcEEEEeCC
Q 009774 474 ---VDKPSEILFVTDVY-QEATAAKAAGLEVVISIRP 506 (526)
Q Consensus 474 ---~~~p~~~l~VgDs~-~Di~~A~~aG~~~i~v~~~ 506 (526)
.. |+++++|||.. .||.+|...|+.+||+..|
T Consensus 131 ~~~~~-p~eiavIGDrl~TDVl~gN~~G~~tilv~~g 166 (168)
T PF09419_consen 131 KVVTS-PSEIAVIGDRLFTDVLMGNRMGSYTILVTDG 166 (168)
T ss_pred cCCCC-chhEEEEcchHHHHHHHhhccCceEEEEecC
Confidence 34 99999999999 8999999999999999876
No 140
>PRK11590 hypothetical protein; Provisional
Probab=98.89 E-value=1.1e-07 Score=91.15 Aligned_cols=95 Identities=11% Similarity=0.038 Sum_probs=68.2
Q ss_pred CccCCCHHHHH-HHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE----eCCcC-------CCCCHHHHHHH
Q 009774 401 GEVFDDVPEAL-EKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF----DTAVG-------NKRETPSYVEI 468 (526)
Q Consensus 401 ~~l~pgv~~~L-~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~----~~~~~-------~KP~p~~~~~~ 468 (526)
..+|||+.++| +.|+++|++++|+||++...++.+++.+ ++.. .+.++ +.... +.. .+=..++
T Consensus 94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l---~~~~-~~~~i~t~l~~~~tg~~~g~~c~g-~~K~~~l 168 (211)
T PRK11590 94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDT---PWLP-RVNLIASQMQRRYGGWVLTLRCLG-HEKVAQL 168 (211)
T ss_pred CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHc---cccc-cCceEEEEEEEEEccEECCccCCC-hHHHHHH
Confidence 46799999999 6789899999999999999999999998 5422 23333 11111 111 1222444
Q ss_pred HHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEE
Q 009774 469 TNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV 501 (526)
Q Consensus 469 ~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i 501 (526)
-+.++.+ ...+.+-|||.+|+..-.-+|=..+
T Consensus 169 ~~~~~~~-~~~~~aY~Ds~~D~pmL~~a~~~~~ 200 (211)
T PRK11590 169 ERKIGTP-LRLYSGYSDSKQDNPLLYFCQHRWR 200 (211)
T ss_pred HHHhCCC-cceEEEecCCcccHHHHHhCCCCEE
Confidence 4555775 8889999999999999888886544
No 141
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=98.87 E-value=2.4e-08 Score=98.22 Aligned_cols=83 Identities=11% Similarity=0.105 Sum_probs=62.4
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHH---HHHHHHhhcCCCCcccc-cceEE-eCCcCCCCCHHHHHHHHHHcCCC
Q 009774 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRL---AQRLIFGNSNYGDLRKY-LSGFF-DTAVGNKRETPSYVEITNSLGVD 475 (526)
Q Consensus 401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~---~~~~~l~~l~~~gl~~~-fd~i~-~~~~~~KP~p~~~~~~~~~l~~~ 475 (526)
..++||+.++|+.|+++|++++++||.+.. .....++.+ |+..+ ++.++ .. ..++++..+..+.+..++
T Consensus 117 a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~---Gi~~~~~d~lllr~--~~~~K~~rr~~I~~~y~I- 190 (266)
T TIGR01533 117 AKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRF---GFPQADEEHLLLKK--DKSSKESRRQKVQKDYEI- 190 (266)
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHc---CcCCCCcceEEeCC--CCCCcHHHHHHHHhcCCE-
Confidence 468999999999999999999999998744 344667777 88654 45555 22 235566777777775554
Q ss_pred CCCcEEEEecCHhhHHHH
Q 009774 476 KPSEILFVTDVYQEATAA 493 (526)
Q Consensus 476 ~p~~~l~VgDs~~Di~~A 493 (526)
+++|||+..|+...
T Consensus 191 ----vl~vGD~~~Df~~~ 204 (266)
T TIGR01533 191 ----VLLFGDNLLDFDDF 204 (266)
T ss_pred ----EEEECCCHHHhhhh
Confidence 79999999999653
No 142
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=98.85 E-value=1.9e-09 Score=98.72 Aligned_cols=68 Identities=25% Similarity=0.313 Sum_probs=55.0
Q ss_pred cCCCCCHHHHHHHHHHcCCCCCCcEEEEecCH-hhHHHHHHcCCcEEEEeCCCCCC----CCCCCCCeEecCCC
Q 009774 456 VGNKRETPSYVEITNSLGVDKPSEILFVTDVY-QEATAAKAAGLEVVISIRPGNGP----LPENHGFKTINSFA 524 (526)
Q Consensus 456 ~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~-~Di~~A~~aG~~~i~v~~~~~~~----~~~~~~~~~i~~l~ 524 (526)
..+||.|..|..+++.+|++ |++|+||||.. .|+-+|.++||+.|.|..|.-.+ .....++.+.++|.
T Consensus 178 vvGKP~~~fFe~al~~~gv~-p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK~rpsDe~k~~~~p~~~~d~f~ 250 (262)
T KOG3040|consen 178 VVGKPSPFFFESALQALGVD-PEEAVMIGDDLNDDVGGAQACGMRGILVKTGKFRPSDEEKPPVPPDLTADNFA 250 (262)
T ss_pred EecCCCHHHHHHHHHhcCCC-hHHheEEccccccchhhHhhhcceeEEeeccccCCcccccCCCCcchhhhhHH
Confidence 45799999999999999998 99999999999 79999999999999999873322 12222366666654
No 143
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.78 E-value=1.1e-08 Score=101.81 Aligned_cols=113 Identities=12% Similarity=0.063 Sum_probs=71.9
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCch-----HHHHHHHHhhcCCCCcccc--cceEEeCCcCCCCCHHHHHHHHHHcCCC
Q 009774 403 VFDDVPEALEKWHSLGTKVYIYSSGS-----RLAQRLIFGNSNYGDLRKY--LSGFFDTAVGNKRETPSYVEITNSLGVD 475 (526)
Q Consensus 403 l~pgv~~~L~~L~~~G~~l~vvTn~~-----~~~~~~~l~~l~~~gl~~~--fd~i~~~~~~~KP~p~~~~~~~~~l~~~ 475 (526)
.++++.++++.++..+..+.++++.+ ....+.+.+.+ ++... ....++.....-.++..++.+++.+|++
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~ 214 (272)
T PRK10530 138 TFTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVEHEL---GLECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWS 214 (272)
T ss_pred ceEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHhhhc---CceEEEecCceEEEecCCCChHHHHHHHHHHcCCC
Confidence 46778888888887777777777754 22333344444 43311 1112232233333567899999999997
Q ss_pred CCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecC
Q 009774 476 KPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINS 522 (526)
Q Consensus 476 ~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~ 522 (526)
+++|++|||+.+|+..++.+|+.. ..+...+.....+++++.+
T Consensus 215 -~~e~i~~GD~~NDi~m~~~ag~~v---amgna~~~lk~~Ad~v~~~ 257 (272)
T PRK10530 215 -MKNVVAFGDNFNDISMLEAAGLGV---AMGNADDAVKARADLVIGD 257 (272)
T ss_pred -HHHeEEeCCChhhHHHHHhcCceE---EecCchHHHHHhCCEEEec
Confidence 999999999999999999999733 3332222333334666654
No 144
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.76 E-value=2e-07 Score=87.41 Aligned_cols=85 Identities=14% Similarity=0.151 Sum_probs=61.0
Q ss_pred CCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCccccc--ceEEeCCc--------CCC---CCHHHHHHH---
Q 009774 405 DDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL--SGFFDTAV--------GNK---RETPSYVEI--- 468 (526)
Q Consensus 405 pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~f--d~i~~~~~--------~~K---P~p~~~~~~--- 468 (526)
|++.++|+.++++|++++|+|.++...++.+++.+ ++...+ ..-+.... ..+ -+...+..+
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~---~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~ 168 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERL---GIDDDNVIGNELFDNGGGIFTGRITGSNCGGKAEALKELYIR 168 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHT---TSSEGGEEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHc---CCCceEEEEEeeeecccceeeeeECCCCCCcHHHHHHHHHHH
Confidence 44449999999999999999999999999999988 666422 11111000 000 134556666
Q ss_pred HHHcCCCCCCcEEEEecCHhhHHHHH
Q 009774 469 TNSLGVDKPSEILFVTDVYQEATAAK 494 (526)
Q Consensus 469 ~~~l~~~~p~~~l~VgDs~~Di~~A~ 494 (526)
... +.. +..+++||||.+|+.+++
T Consensus 169 ~~~-~~~-~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 169 DEE-DID-PDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHH-THT-CCEEEEEESSGGGHHHHH
T ss_pred hhc-CCC-CCeEEEEECCHHHHHHhC
Confidence 444 786 899999999999998865
No 145
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.74 E-value=8.4e-09 Score=90.69 Aligned_cols=83 Identities=18% Similarity=0.309 Sum_probs=73.2
Q ss_pred HHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHh
Q 009774 409 EALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQ 488 (526)
Q Consensus 409 ~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~ 488 (526)
--++.|.+.|++++|+|......++...+.+ |+...|..+ +-+...|..+++++++. +++|.||||...
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~L---GI~~~~qG~-------~dK~~a~~~L~~~~~l~-~e~~ayiGDD~~ 110 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDL---GIKHLYQGI-------SDKLAAFEELLKKLNLD-PEEVAYVGDDLV 110 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHc---CCceeeech-------HhHHHHHHHHHHHhCCC-HHHhhhhcCccc
Confidence 4677888899999999999999999999999 887655444 55678899999999998 999999999999
Q ss_pred hHHHHHHcCCcEEE
Q 009774 489 EATAAKAAGLEVVI 502 (526)
Q Consensus 489 Di~~A~~aG~~~i~ 502 (526)
|+..-.++|+.+.-
T Consensus 111 Dlpvm~~vGls~a~ 124 (170)
T COG1778 111 DLPVMEKVGLSVAV 124 (170)
T ss_pred cHHHHHHcCCcccc
Confidence 99999999997653
No 146
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.68 E-value=4.8e-08 Score=95.96 Aligned_cols=56 Identities=13% Similarity=0.172 Sum_probs=49.9
Q ss_pred CCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHH
Q 009774 405 DDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETP 463 (526)
Q Consensus 405 pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~ 463 (526)
||+.++|++|+++|++++|+||++++.+...++.+ |+..+|+.++ ++....||+|+
T Consensus 149 PgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~l---GLd~YFdvIIs~Gdv~~~kp~~e 206 (301)
T TIGR01684 149 PRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKV---KLDRYFDIIISGGHKAEEYSTMS 206 (301)
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHc---CCCcccCEEEECCccccCCCCcc
Confidence 89999999999999999999999999999999999 9999999888 34566677664
No 147
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=98.67 E-value=2.7e-06 Score=81.44 Aligned_cols=96 Identities=10% Similarity=0.076 Sum_probs=66.5
Q ss_pred CccCCCHHHHHH-HHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE----eCCcCCC---C---CHHHHHHHH
Q 009774 401 GEVFDDVPEALE-KWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF----DTAVGNK---R---ETPSYVEIT 469 (526)
Q Consensus 401 ~~l~pgv~~~L~-~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~----~~~~~~K---P---~p~~~~~~~ 469 (526)
..+||++.++|+ .++++|++++|+||++...++.+.+.. ++..- +.++ +...+++ | -++=..++-
T Consensus 93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~---~~~~~-~~~i~t~le~~~gg~~~g~~c~g~~Kv~rl~ 168 (210)
T TIGR01545 93 VTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDS---NFIHR-LNLIASQIERGNGGWVLPLRCLGHEKVAQLE 168 (210)
T ss_pred CCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhc---ccccc-CcEEEEEeEEeCCceEcCccCCChHHHHHHH
Confidence 368999999996 889899999999999999999999886 33221 2222 1101111 1 112223344
Q ss_pred HHcCCCCCCcEEEEecCHhhHHHHHHcCCcEE
Q 009774 470 NSLGVDKPSEILFVTDVYQEATAAKAAGLEVV 501 (526)
Q Consensus 470 ~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i 501 (526)
+.++.+ .+.+.+-|||.+|+..-.-+|-..+
T Consensus 169 ~~~~~~-~~~~~aYsDS~~D~pmL~~a~~~~~ 199 (210)
T TIGR01545 169 QKIGSP-LKLYSGYSDSKQDNPLLAFCEHRWR 199 (210)
T ss_pred HHhCCC-hhheEEecCCcccHHHHHhCCCcEE
Confidence 555655 7789999999999999888887554
No 148
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.63 E-value=1.1e-06 Score=80.21 Aligned_cols=88 Identities=20% Similarity=0.261 Sum_probs=68.0
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCccc--ccceEE-----------eC-----CcCCCCC
Q 009774 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK--YLSGFF-----------DT-----AVGNKRE 461 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~--~fd~i~-----------~~-----~~~~KP~ 461 (526)
...+-||++++...|+++|.+++++|++-+..+..+-+.| |+.. .|...+ +. ..++|
T Consensus 86 k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~L---gi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggK-- 160 (227)
T KOG1615|consen 86 KPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQL---GIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGK-- 160 (227)
T ss_pred CCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHh---CCcHhhhhhheeeeccCCcccccccCCccccCCcc--
Confidence 4578999999999999999999999999999999999988 7764 222211 11 12344
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHH
Q 009774 462 TPSYVEITNSLGVDKPSEILFVTDVYQEATAAKA 495 (526)
Q Consensus 462 p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~ 495 (526)
++.+..+.+ +.. -+.++||||..+|+++..-
T Consensus 161 a~~i~~lrk--~~~-~~~~~mvGDGatDlea~~p 191 (227)
T KOG1615|consen 161 AEVIALLRK--NYN-YKTIVMVGDGATDLEAMPP 191 (227)
T ss_pred HHHHHHHHh--CCC-hheeEEecCCccccccCCc
Confidence 466777776 775 7799999999999987655
No 149
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=98.60 E-value=2.3e-08 Score=91.63 Aligned_cols=96 Identities=14% Similarity=0.106 Sum_probs=82.7
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCccc-ccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK-YLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 477 (526)
Q Consensus 401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~-~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p 477 (526)
+...||+.++|+.|.+. |.++|.|++++.+++.+++.+ +... +|+.++ +++...+|. |.+.++.+|.+ +
T Consensus 41 v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~l---dp~~~~f~~~l~r~~~~~~~~~---~~K~L~~l~~~-~ 112 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDIL---DRGGKVISRRLYRESCVFTNGK---YVKDLSLVGKD-L 112 (162)
T ss_pred EEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHH---CcCCCEEeEEEEccccEEeCCC---EEeEchhcCCC-h
Confidence 35789999999999987 999999999999999999999 7664 788777 444445655 78889999997 9
Q ss_pred CcEEEEecCHhhHHHHHHcCCcEEEEe
Q 009774 478 SEILFVTDVYQEATAAKAAGLEVVISI 504 (526)
Q Consensus 478 ~~~l~VgDs~~Di~~A~~aG~~~i~v~ 504 (526)
++|++|||++.++..+.++|+......
T Consensus 113 ~~vIiVDD~~~~~~~~~~NgI~i~~f~ 139 (162)
T TIGR02251 113 SKVIIIDNSPYSYSLQPDNAIPIKSWF 139 (162)
T ss_pred hhEEEEeCChhhhccCccCEeecCCCC
Confidence 999999999999999999999876554
No 150
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=98.58 E-value=8.5e-08 Score=104.69 Aligned_cols=110 Identities=17% Similarity=0.182 Sum_probs=84.9
Q ss_pred cCccCCCHHHHHHHHHHCCC-eEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774 400 EGEVFDDVPEALEKWHSLGT-KVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPS 478 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~-~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~ 478 (526)
...++||+.++|++|+++|+ +++++||.+....+..++++ |+.++|..+ .|++. ..++++++.+ ++
T Consensus 360 ~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~l---gi~~~f~~~-------~p~~K--~~~i~~l~~~-~~ 426 (536)
T TIGR01512 360 SDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVAREL---GIDEVHAEL-------LPEDK--LEIVKELREK-YG 426 (536)
T ss_pred eccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHc---CChhhhhcc-------CcHHH--HHHHHHHHhc-CC
Confidence 34789999999999999999 99999999999999999999 898776544 23222 4577777776 88
Q ss_pred cEEEEecCHhhHHHHHHcCCcEEEEeCC-CCCCCCCCCCCeEe--cCCCC
Q 009774 479 EILFVTDVYQEATAAKAAGLEVVISIRP-GNGPLPENHGFKTI--NSFAE 525 (526)
Q Consensus 479 ~~l~VgDs~~Di~~A~~aG~~~i~v~~~-~~~~~~~~~~~~~i--~~l~e 525 (526)
+++||||+.+|+.+++++|+ .+.++ ...+.....+|.++ +++.+
T Consensus 427 ~v~~vGDg~nD~~al~~A~v---gia~g~~~~~~~~~~ad~vl~~~~l~~ 473 (536)
T TIGR01512 427 PVAMVGDGINDAPALAAADV---GIAMGASGSDVAIETADVVLLNDDLSR 473 (536)
T ss_pred EEEEEeCCHHHHHHHHhCCE---EEEeCCCccHHHHHhCCEEEECCCHHH
Confidence 99999999999999999995 55555 22222223347777 56554
No 151
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=98.55 E-value=1.6e-07 Score=103.07 Aligned_cols=106 Identities=14% Similarity=0.141 Sum_probs=80.3
Q ss_pred cCccCCCHHHHHHHHHHCC-CeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774 400 EGEVFDDVPEALEKWHSLG-TKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPS 478 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G-~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~ 478 (526)
+..++||+.++|++|+++| ++++++||.+....+.+++++ |+.++|..+. .++++ .++++++.. ++
T Consensus 382 ~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~l---gi~~~f~~~~-----p~~K~----~~v~~l~~~-~~ 448 (556)
T TIGR01525 382 RDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAEL---GIDEVHAELL-----PEDKL----AIVKELQEE-GG 448 (556)
T ss_pred cccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHh---CCCeeeccCC-----HHHHH----HHHHHHHHc-CC
Confidence 3479999999999999999 999999999999999999999 8877665431 11222 355555556 88
Q ss_pred cEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEec
Q 009774 479 EILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTIN 521 (526)
Q Consensus 479 ~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~ 521 (526)
+|+||||+.+|+.+++++| +.+.++...+.....+|.++.
T Consensus 449 ~v~~vGDg~nD~~al~~A~---vgia~g~~~~~~~~~Ad~vi~ 488 (556)
T TIGR01525 449 VVAMVGDGINDAPALAAAD---VGIAMGAGSDVAIEAADIVLL 488 (556)
T ss_pred EEEEEECChhHHHHHhhCC---EeEEeCCCCHHHHHhCCEEEe
Confidence 9999999999999999999 566655222111223466665
No 152
>COG4996 Predicted phosphatase [General function prediction only]
Probab=98.49 E-value=3.3e-07 Score=77.96 Aligned_cols=79 Identities=19% Similarity=0.204 Sum_probs=64.7
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHH---HHHHc-----
Q 009774 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVE---ITNSL----- 472 (526)
Q Consensus 401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~---~~~~l----- 472 (526)
+.|||.+.++|+.+|..|+-++.+|=+....+-..++.+ ++.+||+.++ .+|+|.-++. ++..+
T Consensus 40 v~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral---~~~~yFhy~V-----iePhP~K~~ML~~llr~i~~er~ 111 (164)
T COG4996 40 VHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRAL---DLLQYFHYIV-----IEPHPYKFLMLSQLLREINTERN 111 (164)
T ss_pred EEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHh---chhhhEEEEE-----ecCCChhHHHHHHHHHHHHHhhc
Confidence 479999999999999999999999998888888899999 9999999987 3555544443 33333
Q ss_pred -CCCCCCcEEEEecCHh
Q 009774 473 -GVDKPSEILFVTDVYQ 488 (526)
Q Consensus 473 -~~~~p~~~l~VgDs~~ 488 (526)
.++ |++++|++|+.-
T Consensus 112 ~~ik-P~~Ivy~DDR~i 127 (164)
T COG4996 112 QKIK-PSEIVYLDDRRI 127 (164)
T ss_pred cccC-cceEEEEecccc
Confidence 466 999999999873
No 153
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=98.47 E-value=1.3e-06 Score=81.22 Aligned_cols=103 Identities=14% Similarity=0.091 Sum_probs=74.9
Q ss_pred cCccCCCHHHHHHHHHHCCC-eEEEEeCchHHHHHHHHhhcCCCCcccccceEEe------CCc------C-----CCCC
Q 009774 400 EGEVFDDVPEALEKWHSLGT-KVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFD------TAV------G-----NKRE 461 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~-~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~------~~~------~-----~KP~ 461 (526)
.++..||+.++++.+++.|. .+.|||.++...++.+++++ ++.++|+.|+. ..+ + ++--
T Consensus 82 ~iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~---~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~C 158 (256)
T KOG3120|consen 82 SIPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAA---GIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLC 158 (256)
T ss_pred cCCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHc---cHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcC
Confidence 45788999999999999986 99999999999999999999 99999999882 111 0 0101
Q ss_pred H-H-----HHHHH-H--HHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774 462 T-P-----SYVEI-T--NSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 506 (526)
Q Consensus 462 p-~-----~~~~~-~--~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~ 506 (526)
| . ...++ + -+-|+. -++.+||||+.+|+-+-...-..-+...|.
T Consensus 159 PsNmCKg~Vl~~~~~s~~~~gv~-yer~iYvGDG~nD~CP~l~Lr~~D~ampRk 211 (256)
T KOG3120|consen 159 PSNMCKGLVLDELVASQLKDGVR-YERLIYVGDGANDFCPVLRLRACDVAMPRK 211 (256)
T ss_pred chhhhhhHHHHHHHHHHhhcCCc-eeeEEEEcCCCCCcCcchhcccCceecccC
Confidence 1 1 11111 1 223665 789999999999998877765544444443
No 154
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=98.44 E-value=7.5e-07 Score=87.70 Aligned_cols=80 Identities=16% Similarity=0.167 Sum_probs=63.2
Q ss_pred CCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEe-CCcCC-------------------------
Q 009774 405 DDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFD-TAVGN------------------------- 458 (526)
Q Consensus 405 pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~-~~~~~------------------------- 458 (526)
|++.++|++|+++|++++|+||++++.+...++.+ |+..+|+.+++ .....
T Consensus 151 p~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~l---gL~~yFDvII~~g~i~~k~~~~~~~d~~~~~~~~~~~f~~d~ 227 (303)
T PHA03398 151 PFVYDSLDELKERGCVLVLWSYGNREHVVHSLKET---KLEGYFDIIICGGRKAGEYSRRVIVDNKYKMVFVKKPFYLDV 227 (303)
T ss_pred hhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHc---CCCccccEEEECCCcccccccceeecccceeEEecCceeEeC
Confidence 88999999999999999999999999999999999 99999997772 11111
Q ss_pred ------CCCHHHHHHHHHHcCCCCCCcEEEEecCH
Q 009774 459 ------KRETPSYVEITNSLGVDKPSEILFVTDVY 487 (526)
Q Consensus 459 ------KP~p~~~~~~~~~l~~~~p~~~l~VgDs~ 487 (526)
...|.+.+..+++.|+.--..+-.|+|-.
T Consensus 228 ~~~~~lPKSprvVl~yL~~~gvn~~KtiTLVDDl~ 262 (303)
T PHA03398 228 TDVKNLPKSPRVVLWYLRKKGVNYFKTITLVDDLK 262 (303)
T ss_pred CcccCCCCCCeehHHHHHHcCcceeccEEEeccCc
Confidence 23577788888888875235666777765
No 155
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=98.41 E-value=1.4e-06 Score=84.49 Aligned_cols=79 Identities=16% Similarity=0.216 Sum_probs=55.2
Q ss_pred eEEEEeCchHHHHHHHHhhcCCCCcc--cccce-EEeCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHc
Q 009774 420 KVYIYSSGSRLAQRLIFGNSNYGDLR--KYLSG-FFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAA 496 (526)
Q Consensus 420 ~l~vvTn~~~~~~~~~l~~l~~~gl~--~~fd~-i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~a 496 (526)
.+.+.++.+.+.....++.+ +.. -.... .++-......++..+..+++.+|++ ++++++|||+.+|+...+.+
T Consensus 117 ~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~-~~~~i~~GD~~NDi~m~~~a 192 (230)
T PRK01158 117 EVALRRTVPVEEVRELLEEL---GLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGID-PEEVAAIGDSENDLEMFEVA 192 (230)
T ss_pred eeeecccccHHHHHHHHHHc---CCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCC-HHHEEEECCchhhHHHHHhc
Confidence 34555666666666666665 321 00011 1133344556688999999999997 99999999999999999999
Q ss_pred CCcEEE
Q 009774 497 GLEVVI 502 (526)
Q Consensus 497 G~~~i~ 502 (526)
|+..+.
T Consensus 193 g~~vam 198 (230)
T PRK01158 193 GFGVAV 198 (230)
T ss_pred CceEEe
Confidence 987554
No 156
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.38 E-value=1e-05 Score=80.76 Aligned_cols=88 Identities=10% Similarity=0.007 Sum_probs=59.5
Q ss_pred HHHHHHCCCeEEEE---eCchHHHHHHHHhhcCCCCcc----cccceEEeCCcCCCCCHHHHHHHHHHcCCCCC-CcEEE
Q 009774 411 LEKWHSLGTKVYIY---SSGSRLAQRLIFGNSNYGDLR----KYLSGFFDTAVGNKRETPSYVEITNSLGVDKP-SEILF 482 (526)
Q Consensus 411 L~~L~~~G~~l~vv---Tn~~~~~~~~~l~~l~~~gl~----~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p-~~~l~ 482 (526)
++.++..++...++ ++.........++.. ++. .+|..+. ... .+.....++++.+|++ + +++++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~ei~---~~~-~Kg~al~~l~~~~~i~-~~~~v~~ 212 (273)
T PRK00192 141 ARLAKDREFSEPFLWNGSEAAKERFEEALKRL---GLKVTRGGRFLHLL---GGG-DKGKAVRWLKELYRRQ-DGVETIA 212 (273)
T ss_pred HHHHHhcccCCceeecCchHHHHHHHHHHHHc---CCEEEECCeEEEEe---CCC-CHHHHHHHHHHHHhcc-CCceEEE
Confidence 34455556665555 444444455555554 554 2222222 233 4556899999999997 9 99999
Q ss_pred EecCHhhHHHHHHcCCcEEEEeCC
Q 009774 483 VTDVYQEATAAKAAGLEVVISIRP 506 (526)
Q Consensus 483 VgDs~~Di~~A~~aG~~~i~v~~~ 506 (526)
|||+.+|+..++.+|+.++.-+-.
T Consensus 213 ~GDs~NDi~m~~~ag~~vam~NA~ 236 (273)
T PRK00192 213 LGDSPNDLPMLEAADIAVVVPGPD 236 (273)
T ss_pred EcCChhhHHHHHhCCeeEEeCCCC
Confidence 999999999999999887765543
No 157
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=98.32 E-value=1e-06 Score=96.64 Aligned_cols=105 Identities=10% Similarity=0.076 Sum_probs=76.6
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCc
Q 009774 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE 479 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~ 479 (526)
..+++||+.++|++|+++|++++++||.+....+.+++.+ |+. ++... +|++. ..+++++..+ +++
T Consensus 403 ~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~l---gi~-----~~~~~---~p~~K--~~~v~~l~~~-~~~ 468 (562)
T TIGR01511 403 EDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKEL---GIN-----VRAEV---LPDDK--AALIKELQEK-GRV 468 (562)
T ss_pred cccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHc---CCc-----EEccC---ChHHH--HHHHHHHHHc-CCE
Confidence 3468999999999999999999999999999999999999 884 22211 23221 3445555556 899
Q ss_pred EEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEec
Q 009774 480 ILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTIN 521 (526)
Q Consensus 480 ~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~ 521 (526)
|+||||+.+|+.+++++|+ .+.++...+.....+|.++.
T Consensus 469 v~~VGDg~nD~~al~~A~v---gia~g~g~~~a~~~Advvl~ 507 (562)
T TIGR01511 469 VAMVGDGINDAPALAQADV---GIAIGAGTDVAIEAADVVLM 507 (562)
T ss_pred EEEEeCCCccHHHHhhCCE---EEEeCCcCHHHHhhCCEEEe
Confidence 9999999999999999996 34444212222223466663
No 158
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=98.28 E-value=8.5e-07 Score=83.62 Aligned_cols=102 Identities=22% Similarity=0.291 Sum_probs=60.6
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHH-------HHHHHHh-hcCCCCcccccceEEeCCcCCCCCHHHHHHHHHH
Q 009774 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRL-------AQRLIFG-NSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNS 471 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~-------~~~~~l~-~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~ 471 (526)
..+|.||+.++|++|.+.|+.+.++|..+.. .....++ ++ +...+-+.++. ..|- .
T Consensus 71 ~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf---~~i~~~~~~~~---~~K~----------~ 134 (191)
T PF06941_consen 71 NLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHF---PFIPYDNLIFT---GDKT----------L 134 (191)
T ss_dssp T--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHH---THHHHCCEEEE---SSGG----------G
T ss_pred CCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHc---CCCchheEEEe---cCCC----------e
Confidence 4579999999999999999888888877543 2223333 33 22221122222 1221 1
Q ss_pred cCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCCC
Q 009774 472 LGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAE 525 (526)
Q Consensus 472 l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~e 525 (526)
++.+ ++|+|++..+..+...|+.+|++..+.|.... ....++|..|
T Consensus 135 v~~D-----vlIDD~~~n~~~~~~~g~~~iLfd~p~Nr~~~---~~~Rv~~W~e 180 (191)
T PF06941_consen 135 VGGD-----VLIDDRPHNLEQFANAGIPVILFDQPYNRDES---NFPRVNNWEE 180 (191)
T ss_dssp C--S-----EEEESSSHHHSS-SSESSEEEEE--GGGTT-----TSEEE-STTS
T ss_pred Eecc-----EEecCChHHHHhccCCCceEEEEcCCCCCCCC---CCccCCCHHH
Confidence 2333 89999999999999999999999988665433 3677777766
No 159
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.27 E-value=8.8e-06 Score=78.47 Aligned_cols=79 Identities=15% Similarity=0.106 Sum_probs=56.3
Q ss_pred eEEEEeCchHHHHHHHHhhcCCCCccccc---ceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHc
Q 009774 420 KVYIYSSGSRLAQRLIFGNSNYGDLRKYL---SGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAA 496 (526)
Q Consensus 420 ~l~vvTn~~~~~~~~~l~~l~~~gl~~~f---d~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~a 496 (526)
...+.+..+.+.....++.+ +..-.+ ...++-.....++...+.++++.+|++ ++++++|||+.+|+...+.+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~-~~~~i~~GD~~NDi~m~~~a 184 (225)
T TIGR01482 109 LVKMRYGIDVDTVREIIKEL---GLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIK-PGETLVCGDSENDIDLFEVP 184 (225)
T ss_pred eEEEeecCCHHHHHHHHHhc---CceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCC-HHHEEEECCCHhhHHHHHhc
Confidence 34455555566666677776 432111 112233445566778899999999997 99999999999999999999
Q ss_pred CCcEEE
Q 009774 497 GLEVVI 502 (526)
Q Consensus 497 G~~~i~ 502 (526)
|..+..
T Consensus 185 g~~vam 190 (225)
T TIGR01482 185 GFGVAV 190 (225)
T ss_pred CceEEc
Confidence 996554
No 160
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=98.24 E-value=1.1e-05 Score=73.09 Aligned_cols=91 Identities=16% Similarity=0.081 Sum_probs=65.8
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE----------------eC--CcCCCCCH
Q 009774 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF----------------DT--AVGNKRET 462 (526)
Q Consensus 401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~----------------~~--~~~~KP~p 462 (526)
+.+.||.+++.+..++++++++|+|++-......+++.+-.-.-....|.+. ++ .+..||.
T Consensus 72 i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK~~- 150 (220)
T COG4359 72 IKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDKSS- 150 (220)
T ss_pred cccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCCCcch-
Confidence 4688999999999999999999999999999999999872100112222221 11 2333442
Q ss_pred HHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCC
Q 009774 463 PSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGL 498 (526)
Q Consensus 463 ~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~ 498 (526)
....+.-. ++.++|+||+.+|+.+|+..-.
T Consensus 151 -----vI~~l~e~-~e~~fy~GDsvsDlsaaklsDl 180 (220)
T COG4359 151 -----VIHELSEP-NESIFYCGDSVSDLSAAKLSDL 180 (220)
T ss_pred -----hHHHhhcC-CceEEEecCCcccccHhhhhhh
Confidence 34455554 8999999999999999998764
No 161
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=98.20 E-value=1.9e-06 Score=87.99 Aligned_cols=71 Identities=17% Similarity=0.081 Sum_probs=55.8
Q ss_pred cCCCCCHHHHHHHHHHc--------CCC----CCCcEEEEecCH-hhHHHHHHcCCcEEEEeCC-CCCCCC--CCCCCeE
Q 009774 456 VGNKRETPSYVEITNSL--------GVD----KPSEILFVTDVY-QEATAAKAAGLEVVISIRP-GNGPLP--ENHGFKT 519 (526)
Q Consensus 456 ~~~KP~p~~~~~~~~~l--------~~~----~p~~~l~VgDs~-~Di~~A~~aG~~~i~v~~~-~~~~~~--~~~~~~~ 519 (526)
..+||+|.+|..+++.+ +++ ++++++||||++ +||.+|+++||.+++|.+| ...... ...++++
T Consensus 230 ~~GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~~~~~~~~~p~~v 309 (321)
T TIGR01456 230 TLGKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNGGDDLKECKPTLI 309 (321)
T ss_pred EcCCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccCCCCCCCCCCCCEE
Confidence 35899999999999888 432 257999999999 8999999999999999887 222221 2235899
Q ss_pred ecCCCCC
Q 009774 520 INSFAEI 526 (526)
Q Consensus 520 i~~l~eL 526 (526)
++|+.|+
T Consensus 310 v~~l~e~ 316 (321)
T TIGR01456 310 VNDVFDA 316 (321)
T ss_pred ECCHHHH
Confidence 9998764
No 162
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=98.17 E-value=3.8e-06 Score=70.58 Aligned_cols=83 Identities=11% Similarity=0.058 Sum_probs=51.6
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHH---HHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCc
Q 009774 403 VFDDVPEALEKWHSLGTKVYIYSSGSRL---AQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE 479 (526)
Q Consensus 403 l~pgv~~~L~~L~~~G~~l~vvTn~~~~---~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~ 479 (526)
++||+.++|++|+++|+++.++||++.. .....++.+ |+.-.-+.++.+ .......+++. -. ...
T Consensus 15 ~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~---Gi~~~~~~i~ts-------~~~~~~~l~~~-~~-~~~ 82 (101)
T PF13344_consen 15 PIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKL---GIPVDEDEIITS-------GMAAAEYLKEH-KG-GKK 82 (101)
T ss_dssp E-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHT---TTT--GGGEEEH-------HHHHHHHHHHH-TT-SSE
T ss_pred cCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhc---CcCCCcCEEECh-------HHHHHHHHHhc-CC-CCE
Confidence 7799999999999999999999999733 344456777 777555566522 12233344442 22 458
Q ss_pred EEEEecCHhhHHHHHHcCC
Q 009774 480 ILFVTDVYQEATAAKAAGL 498 (526)
Q Consensus 480 ~l~VgDs~~Di~~A~~aG~ 498 (526)
+++||-. ...+..+++|+
T Consensus 83 v~vlG~~-~l~~~l~~~G~ 100 (101)
T PF13344_consen 83 VYVLGSD-GLREELREAGF 100 (101)
T ss_dssp EEEES-H-HHHHHHHHTTE
T ss_pred EEEEcCH-HHHHHHHHcCC
Confidence 8888853 45555666664
No 163
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=98.14 E-value=1.4e-06 Score=85.18 Aligned_cols=101 Identities=13% Similarity=0.199 Sum_probs=73.6
Q ss_pred CCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE-----eCCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774 404 FDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF-----DTAVGNKRETPSYVEITNSLGVDKPS 478 (526)
Q Consensus 404 ~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~-----~~~~~~KP~p~~~~~~~~~l~~~~p~ 478 (526)
|+.....+.+|++-++ +.++||.+.-.- ......+.|-..+...+. +....+||.+.++..++++.+++ |+
T Consensus 167 y~KL~kA~~yLqnP~c-lflatn~D~~~p--~~~~~~ipG~G~~v~av~~~t~R~P~v~GKP~~~m~~~l~~~~~i~-ps 242 (306)
T KOG2882|consen 167 YPKLMKALNYLQNPGC-LFLATNRDATTP--PTPGVEIPGAGSFVAAVKFATGRQPIVLGKPSTFMFEYLLEKFNID-PS 242 (306)
T ss_pred HHHHHHHHHHhCCCCc-EEEeccCccccC--CCCCeeccCCccHHHHHHHHhcCCCeecCCCCHHHHHHHHHHcCCC-cc
Confidence 4566778888888777 778899765321 111111112223233332 12346799999999999999998 99
Q ss_pred cEEEEecCH-hhHHHHHHcCCcEEEEeCCCC
Q 009774 479 EILFVTDVY-QEATAAKAAGLEVVISIRPGN 508 (526)
Q Consensus 479 ~~l~VgDs~-~Di~~A~~aG~~~i~v~~~~~ 508 (526)
+|+||||+. +||.-+++.|++++++-.|.+
T Consensus 243 Rt~mvGDRL~TDIlFG~~~G~~TLLvltGv~ 273 (306)
T KOG2882|consen 243 RTCMVGDRLDTDILFGKNCGFKTLLVLSGVT 273 (306)
T ss_pred eEEEEcccchhhhhHhhccCcceEEEecCcC
Confidence 999999999 899999999999999998844
No 164
>PRK10671 copA copper exporting ATPase; Provisional
Probab=98.12 E-value=3.7e-06 Score=96.72 Aligned_cols=86 Identities=16% Similarity=0.255 Sum_probs=73.9
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCc
Q 009774 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE 479 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~ 479 (526)
..+++||+.++|++|+++|++++++|+.+....+.+.+.+ |+.++|..+. |+.-..++++++.+ +++
T Consensus 648 ~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~l---gi~~~~~~~~---------p~~K~~~i~~l~~~-~~~ 714 (834)
T PRK10671 648 RDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEA---GIDEVIAGVL---------PDGKAEAIKRLQSQ-GRQ 714 (834)
T ss_pred cCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc---CCCEEEeCCC---------HHHHHHHHHHHhhc-CCE
Confidence 3478999999999999999999999999999999999999 8876554332 23345688888887 999
Q ss_pred EEEEecCHhhHHHHHHcCC
Q 009774 480 ILFVTDVYQEATAAKAAGL 498 (526)
Q Consensus 480 ~l~VgDs~~Di~~A~~aG~ 498 (526)
++||||+.+|+.+++++|+
T Consensus 715 v~~vGDg~nD~~al~~Agv 733 (834)
T PRK10671 715 VAMVGDGINDAPALAQADV 733 (834)
T ss_pred EEEEeCCHHHHHHHHhCCe
Confidence 9999999999999999999
No 165
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.05 E-value=2.4e-05 Score=75.05 Aligned_cols=80 Identities=18% Similarity=0.218 Sum_probs=57.5
Q ss_pred eEEEEeCchHHHHHHHHhhcCCCCcccccceEE-eCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCC
Q 009774 420 KVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF-DTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGL 498 (526)
Q Consensus 420 ~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~-~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~ 498 (526)
.+.++++.........++.. ++..++.... +-......+...++.+++.+|++ ++++++|||+.+|+...+.+|+
T Consensus 109 ~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~-~~~~i~iGDs~ND~~ml~~ag~ 184 (215)
T TIGR01487 109 LVIMREGKDVDEVREIIKER---GLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIK-PEEVAAIGDSENDIDLFRVVGF 184 (215)
T ss_pred EEEecCCccHHHHHHHHHhC---CeEEEecCceEEEecCCCChHHHHHHHHHHhCCC-HHHEEEECCCHHHHHHHHhCCC
Confidence 44556666666667677766 5554333212 32333344556899999999997 9999999999999999999998
Q ss_pred cEEEE
Q 009774 499 EVVIS 503 (526)
Q Consensus 499 ~~i~v 503 (526)
....-
T Consensus 185 ~vam~ 189 (215)
T TIGR01487 185 KVAVA 189 (215)
T ss_pred eEEcC
Confidence 76654
No 166
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=97.94 E-value=7.9e-06 Score=79.19 Aligned_cols=97 Identities=11% Similarity=0.025 Sum_probs=59.2
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHH---HHHHHhhcCCCCcccccceEE-e-CCcCC---CCCHHHHHHHHHHcC
Q 009774 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLA---QRLIFGNSNYGDLRKYLSGFF-D-TAVGN---KRETPSYVEITNSLG 473 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~---~~~~l~~l~~~gl~~~fd~i~-~-~~~~~---KP~p~~~~~~~~~l~ 473 (526)
++.||+.++++.++++|++|+++||-+... ...-|+.. |+..+-..++ . ..... +..-..-+..+++-|
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~---G~~~~~~l~lr~~~~~~~~~~~~yK~~~r~~i~~~G 191 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKA---GFPGWDHLILRPDKDPSKKSAVEYKSERRKEIEKKG 191 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHH---TTSTBSCGEEEEESSTSS------SHHHHHHHHHTT
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHc---CCCccchhccccccccccccccccchHHHHHHHHcC
Confidence 588999999999999999999999987653 33345555 7654322333 1 11111 111122233333435
Q ss_pred CCCCCcEEEEecCHhhHHHHHHc---CCcEEEEe
Q 009774 474 VDKPSEILFVTDVYQEATAAKAA---GLEVVISI 504 (526)
Q Consensus 474 ~~~p~~~l~VgDs~~Di~~A~~a---G~~~i~v~ 504 (526)
.. =+++|||..+|+.+++.. |-+.+.+.
T Consensus 192 y~---Ii~~iGD~~~D~~~~~~~~~~~~r~f~lP 222 (229)
T PF03767_consen 192 YR---IIANIGDQLSDFSGAKTAGARAERWFKLP 222 (229)
T ss_dssp EE---EEEEEESSGGGCHCTHHHHHHHTTEEE-T
T ss_pred Cc---EEEEeCCCHHHhhcccccccccceEEEcC
Confidence 54 478899999999995544 34455443
No 167
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=97.89 E-value=5.3e-05 Score=72.77 Aligned_cols=95 Identities=12% Similarity=0.070 Sum_probs=60.8
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHH---HHHHHhhcCCCCcccccceEE--eCCcCCCCC----HHHHHHHHHH
Q 009774 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLA---QRLIFGNSNYGDLRKYLSGFF--DTAVGNKRE----TPSYVEITNS 471 (526)
Q Consensus 401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~---~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~----p~~~~~~~~~ 471 (526)
.++.|++.++++.|+++|++++++|+-+... ...-|... |+..+ +.++ ......|+. .+.+.++. +
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~---G~~~~-~~LiLR~~~d~~~~~~~yKs~~R~~l~-~ 193 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINA---GFTGW-KHLILRGLEDSNKTVVTYKSEVRKSLM-E 193 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHc---CCCCc-CeeeecCCCCCCchHhHHHHHHHHHHH-h
Confidence 3688999999999999999999999998766 44455556 76654 5554 212223322 12222222 2
Q ss_pred cCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEe
Q 009774 472 LGVDKPSEILFVTDVYQEATAAKAAGLEVVISI 504 (526)
Q Consensus 472 l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~ 504 (526)
-|-. =+..|||..+|+.+. -+|.++.-+.
T Consensus 194 ~GYr---Iv~~iGDq~sDl~G~-~~~~RtFKLP 222 (229)
T TIGR01675 194 EGYR---IWGNIGDQWSDLLGS-PPGRRTFKLP 222 (229)
T ss_pred CCce---EEEEECCChHHhcCC-CccCceeeCC
Confidence 2332 456789999999664 4555665443
No 168
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=97.86 E-value=2.4e-05 Score=90.43 Aligned_cols=116 Identities=16% Similarity=0.117 Sum_probs=89.4
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEe--C----------------CcCCCCCHH
Q 009774 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFD--T----------------AVGNKRETP 463 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~--~----------------~~~~KP~p~ 463 (526)
+++||+.++++.|++.|+++.++|+.+......+.+.+ |+...++.+++ + ....++.|+
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~---Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~ 604 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRL---GMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPE 604 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc---CCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHH
Confidence 68999999999999999999999999999999999999 88876655431 0 123456777
Q ss_pred HHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCC-CCCCCCCCeEe--cCCC
Q 009774 464 SYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNG-PLPENHGFKTI--NSFA 524 (526)
Q Consensus 464 ~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~-~~~~~~~~~~i--~~l~ 524 (526)
--..+.+.+.-. .+.+.||||+.+|+.+.++|++ ++..+.+. +.....+|.++ ++|.
T Consensus 605 ~K~~iv~~lq~~-g~~v~mvGDGvND~pAl~~AdV---Gia~g~~g~~va~~aaDivl~dd~~~ 664 (884)
T TIGR01522 605 HKMKIVKALQKR-GDVVAMTGDGVNDAPALKLADI---GVAMGQTGTDVAKEAADMILTDDDFA 664 (884)
T ss_pred HHHHHHHHHHHC-CCEEEEECCCcccHHHHHhCCe---eEecCCCcCHHHHHhcCEEEcCCCHH
Confidence 778888888886 8899999999999999999995 55554221 12223447777 4454
No 169
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=97.83 E-value=0.00011 Score=71.95 Aligned_cols=102 Identities=13% Similarity=0.160 Sum_probs=63.8
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCCcCCCCCHHHHH----HHHHHcCC
Q 009774 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYV----EITNSLGV 474 (526)
Q Consensus 401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~~~~KP~p~~~~----~~~~~l~~ 474 (526)
.++.|++.++++.|+++|+++.++||-+.......++.|...|+..+ +.++ +.....+.+--.|. .-+.+-|-
T Consensus 144 ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~-~~LiLR~~~D~~~~~av~yKs~~R~~li~eGY 222 (275)
T TIGR01680 144 APALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTW-EKLILKDPQDNSAENAVEYKTAARAKLIQEGY 222 (275)
T ss_pred CCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCc-ceeeecCCCCCccchhHHHHHHHHHHHHHcCc
Confidence 46889999999999999999999999987654444444433377654 4444 22112222222222 12223334
Q ss_pred CCCCcEEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774 475 DKPSEILFVTDVYQEATAAKAAGLEVVISIRP 506 (526)
Q Consensus 475 ~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~ 506 (526)
. =+..|||..+|+.+....+.++.-+.++
T Consensus 223 r---Iv~~iGDq~sDl~G~~~g~~RtFKLPNP 251 (275)
T TIGR01680 223 N---IVGIIGDQWNDLKGEHRGAIRSFKLPNP 251 (275)
T ss_pred e---EEEEECCCHHhccCCCccCcceecCCCc
Confidence 3 5677899999997666333577766654
No 170
>KOG3699 consensus Cytoskeletal protein Adducin [Signal transduction mechanisms; Cytoskeleton]
Probab=97.82 E-value=1.6e-05 Score=83.91 Aligned_cols=175 Identities=18% Similarity=0.208 Sum_probs=115.5
Q ss_pred HcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCCCCCCCCEEEEeCCCCcccCCCCCCC-CCCCCCCCCchHHHHH
Q 009774 43 TLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPY-PHKPPKCSDCAPLFMK 121 (526)
Q Consensus 43 ~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~~l~~~div~vd~dg~~~~g~~~~p~-~~~p~~~S~E~~lH~~ 121 (526)
..+|..++.+++.||+.+- -.-.-++++|.+..+.+.+..+..++|.+|....+.-..-- ..+ +.-...|.+
T Consensus 363 ~~~~ne~s~~~~pVrIedP---~qfvp~~~NP~Evle~rnkIreqnr~D~ksAGPQSqlL~~V~~e~----s~~~~~~Sa 435 (598)
T KOG3699|consen 363 KEDWNEGSASHTPVRIEDP---NQFVPLLINPKEVLEMRNKIREQNRQDVKSAGPQSQLLASVTAEK----SRSLSTHSA 435 (598)
T ss_pred eccccccccCCceeeccCC---CCccccccCHHHHHHHHhhHHHhhhccccccCCCcceecceeccc----ccccchhhh
Confidence 3478899999999998751 11235999999999999999999999998764433100000 000 111347999
Q ss_pred HHHhc-CcceEEecCChHHHHHHhhcCCCCcccccHHHHHhhhcCC-cccCccceeeecCCCCchHHHHHHHHHHhhCCC
Q 009774 122 AYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGH-GYYDELVVPIIENTAYENELTDSLAKAIDAYPK 199 (526)
Q Consensus 122 iy~~~-dv~aVvH~H~~~~~a~a~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~vpv~~~~~~~~~la~~i~~~l~~~~~ 199 (526)
|++.+ +++||+|.|.+...+-++......++ ..+... .+. .+++..+++.- ++.. + +.+ +.
T Consensus 436 i~~~r~e~k~v~h~~~~pnpf~~ltd~eL~EY---kqever--k~~~~~~d~d~~~~d---~~e~--a----kd~---~~ 498 (598)
T KOG3699|consen 436 IHQVRPEVKCVCHRHYPPNPFVSLTDHELLEY---KQEVER--KGKGVYHDYDGILSD---PGEQ--A----KDL---AD 498 (598)
T ss_pred hhhcCCcccceeecccCCCcccccCchhhhhh---hhhhhc--cCccccccccccccc---cccc--c----ccc---cc
Confidence 99999 99999999999987776665421111 222221 111 12222223321 1111 1 222 33
Q ss_pred CeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 009774 200 ATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLD 243 (526)
Q Consensus 200 ~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~ 243 (526)
.+ ++++|||+.+.|++++ |...+...|-+|+.+.....++.+
T Consensus 499 ~p-v~~~nh~i~Tq~~~V~-aa~~~sl~~~a~~~q~s~as~~~~ 540 (598)
T KOG3699|consen 499 SP-VILRNHGIMTQGESVE-AAYLLSLMELACETQLSIASATAP 540 (598)
T ss_pred CC-cccccccceecccccc-cchhhHHHHHHHHhhhhhccccCC
Confidence 56 9999999999999999 888888999999999877666654
No 171
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=97.79 E-value=0.00015 Score=65.98 Aligned_cols=94 Identities=9% Similarity=0.096 Sum_probs=55.9
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHHHHH---HHHhhcCCC--CcccccceEE-eC----------CcCCCC---CHH
Q 009774 403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQR---LIFGNSNYG--DLRKYLSGFF-DT----------AVGNKR---ETP 463 (526)
Q Consensus 403 l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~---~~l~~l~~~--gl~~~fd~i~-~~----------~~~~KP---~p~ 463 (526)
..|++.+++++|+++|+++.++|+.+..... ..++.+.-. ++.. ..++ .. ....+| +.+
T Consensus 28 ~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~--g~li~~~g~~~~~~~~e~i~~~~~~~K~~ 105 (157)
T smart00775 28 THPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH--GPVLLSPDRLFAALHREVISKKPEVFKIA 105 (157)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC--ceEEEcCCcchhhhhcccccCCHHHHHHH
Confidence 4589999999999999999999999877653 455552000 1211 1222 11 112333 223
Q ss_pred HHHHHHHHcCCCCCCcE-EEEecCHhhHHHHHHcCCc
Q 009774 464 SYVEITNSLGVDKPSEI-LFVTDVYQEATAAKAAGLE 499 (526)
Q Consensus 464 ~~~~~~~~l~~~~p~~~-l~VgDs~~Di~~A~~aG~~ 499 (526)
....+.+.+.-. .-.. +-+||+.+|+.+-+++|+.
T Consensus 106 ~l~~i~~~~~~~-~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 106 CLRDIKSLFPPQ-GNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred HHHHHHHhcCCC-CCCEEEEeCCCchhHHHHHHcCCC
Confidence 333344333211 1223 3367788999999999994
No 172
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=97.77 E-value=8.1e-05 Score=78.68 Aligned_cols=105 Identities=17% Similarity=0.187 Sum_probs=75.0
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCC------CcccccceEE-eCC----------------cC
Q 009774 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYG------DLRKYLSGFF-DTA----------------VG 457 (526)
Q Consensus 401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~------gl~~~fd~i~-~~~----------------~~ 457 (526)
+..-|.+..+|++||+.|.++.++||++-.+....++.+-.. .+.++||.|+ +.. ..
T Consensus 182 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~~~ 261 (448)
T PF05761_consen 182 IHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDTET 261 (448)
T ss_dssp EE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEETTT
T ss_pred ccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEECCC
Confidence 345689999999999999999999999999999999988555 6999999988 111 00
Q ss_pred CC--C-------------CHHHHHHHHHHcCCCCCCcEEEEecCH-hhHHHHHHc-CCcEEEEeCC
Q 009774 458 NK--R-------------ETPSYVEITNSLGVDKPSEILFVTDVY-QEATAAKAA-GLEVVISIRP 506 (526)
Q Consensus 458 ~K--P-------------~p~~~~~~~~~l~~~~p~~~l~VgDs~-~Di~~A~~a-G~~~i~v~~~ 506 (526)
++ . .-.....+++.+|.. ..+++||||+. .||...+.. |++|+.|.+.
T Consensus 262 g~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~-g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~E 326 (448)
T PF05761_consen 262 GKLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWR-GKEVLYFGDHIYGDILKSKKRHGWRTAAIIPE 326 (448)
T ss_dssp SSEECS---SS--TC-EEEE--HHHHHHHCT---GGGEEEEESSTTTTHHHHHHHH-SEEEEE-TT
T ss_pred CccccccccccccCCCEeecCCHHHHHHHHccC-CCeEEEECCchhhhhhhhccccceEEEEEehh
Confidence 11 1 112345577888997 99999999999 899988888 9999999764
No 173
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=97.72 E-value=0.00021 Score=70.17 Aligned_cols=53 Identities=15% Similarity=0.162 Sum_probs=46.3
Q ss_pred eCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774 453 DTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 506 (526)
Q Consensus 453 ~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~ 506 (526)
+.....+++....+.+++.+|++ +++|++|||+.+|+...+.+|..++.+.+.
T Consensus 160 di~~~~~~K~~al~~l~~~~~i~-~~~~i~~GD~~ND~~ml~~~~~~~va~~na 212 (249)
T TIGR01485 160 DILPQGSGKGQALQYLLQKLAME-PSQTLVCGDSGNDIELFEIGSVRGVIVSNA 212 (249)
T ss_pred EEEeCCCChHHHHHHHHHHcCCC-ccCEEEEECChhHHHHHHccCCcEEEECCC
Confidence 33556788889999999999997 999999999999999999988888888664
No 174
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=97.62 E-value=0.00014 Score=65.47 Aligned_cols=92 Identities=15% Similarity=0.196 Sum_probs=62.1
Q ss_pred CCCHHHHHHHHHHCCCeEEEEeCchHHHHHHH----HhhcCCCCcccccceEEeCCcCCCCCHHHHHH--HHHHcCCCCC
Q 009774 404 FDDVPEALEKWHSLGTKVYIYSSGSRLAQRLI----FGNSNYGDLRKYLSGFFDTAVGNKRETPSYVE--ITNSLGVDKP 477 (526)
Q Consensus 404 ~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~----l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~--~~~~l~~~~p 477 (526)
-+-+.+++..=.++|-+++.+|+.+.-..+.. .+.+ .+...-..+ ..+.||.|..|.+ .++.-++.
T Consensus 116 KevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F---~i~~m~pv~---f~Gdk~k~~qy~Kt~~i~~~~~~-- 187 (237)
T COG3700 116 KEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNF---HITNMNPVI---FAGDKPKPGQYTKTQWIQDKNIR-- 187 (237)
T ss_pred HHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhc---ccCCCccee---eccCCCCcccccccHHHHhcCce--
Confidence 34456667766778999999999875533322 2333 343222222 3455776666655 45555554
Q ss_pred CcEEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774 478 SEILFVTDVYQEATAAKAAGLEVVISIRP 506 (526)
Q Consensus 478 ~~~l~VgDs~~Di~~A~~aG~~~i~v~~~ 506 (526)
++-|||-+||.+|+++|++.|-+-|-
T Consensus 188 ---IhYGDSD~Di~AAkeaG~RgIRilRA 213 (237)
T COG3700 188 ---IHYGDSDNDITAAKEAGARGIRILRA 213 (237)
T ss_pred ---EEecCCchhhhHHHhcCccceeEEec
Confidence 89999999999999999999998875
No 175
>PLN02645 phosphoglycolate phosphatase
Probab=97.53 E-value=0.00051 Score=69.91 Aligned_cols=90 Identities=17% Similarity=0.215 Sum_probs=69.4
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHH---HHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRL---AQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPS 478 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~---~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~ 478 (526)
.++||+.++|++|+++|++++++||++.. .....++.+ |+...++.++.+. ......+++.+.. ..
T Consensus 44 ~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~l---Gi~~~~~~I~ts~-------~~~~~~l~~~~~~-~~ 112 (311)
T PLN02645 44 KLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESL---GLNVTEEEIFSSS-------FAAAAYLKSINFP-KD 112 (311)
T ss_pred ccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHC---CCCCChhhEeehH-------HHHHHHHHhhccC-CC
Confidence 48899999999999999999999999833 333455667 8877777776332 2445666677774 66
Q ss_pred cEEEEecCHhhHHHHHHcCCcEEE
Q 009774 479 EILFVTDVYQEATAAKAAGLEVVI 502 (526)
Q Consensus 479 ~~l~VgDs~~Di~~A~~aG~~~i~ 502 (526)
+.+||+++..+.+.++++|+.++.
T Consensus 113 ~~V~viG~~~~~~~l~~~Gi~~~~ 136 (311)
T PLN02645 113 KKVYVIGEEGILEELELAGFQYLG 136 (311)
T ss_pred CEEEEEcCHHHHHHHHHCCCEEec
Confidence 678898889999999999998764
No 176
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=97.51 E-value=0.00017 Score=81.80 Aligned_cols=83 Identities=20% Similarity=0.226 Sum_probs=66.5
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcE
Q 009774 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEI 480 (526)
Q Consensus 401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~ 480 (526)
.+++||+.+++++|+++|++++++|+.+....+.+.+.+ |+..++ +.....|++ ++++++ . +..+
T Consensus 567 d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~l---gi~~~~----~~~p~~K~~------~v~~l~-~-~~~v 631 (741)
T PRK11033 567 DTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGEL---GIDFRA----GLLPEDKVK------AVTELN-Q-HAPL 631 (741)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc---CCCeec----CCCHHHHHH------HHHHHh-c-CCCE
Confidence 378999999999999999999999999999999999999 885322 111222322 445555 3 5689
Q ss_pred EEEecCHhhHHHHHHcCC
Q 009774 481 LFVTDVYQEATAAKAAGL 498 (526)
Q Consensus 481 l~VgDs~~Di~~A~~aG~ 498 (526)
+||||+.+|..+.+++++
T Consensus 632 ~mvGDgiNDapAl~~A~v 649 (741)
T PRK11033 632 AMVGDGINDAPAMKAASI 649 (741)
T ss_pred EEEECCHHhHHHHHhCCe
Confidence 999999999999999994
No 177
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=97.50 E-value=0.00022 Score=64.85 Aligned_cols=78 Identities=18% Similarity=0.185 Sum_probs=60.4
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcc-ccc-ceEE--eCCcCCCCCHHHHHHHH-HHcCC
Q 009774 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLR-KYL-SGFF--DTAVGNKRETPSYVEIT-NSLGV 474 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~-~~f-d~i~--~~~~~~KP~p~~~~~~~-~~l~~ 474 (526)
.++++||+.++|+.|++. |+++|+||+++.++..+++.+ +.. .+| +.++ +++. . .+.+-+ .-++.
T Consensus 56 ~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~l---dp~~~~F~~ri~~rd~~~--~----~~~KdL~~i~~~ 125 (156)
T TIGR02250 56 LTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLI---DPDGKYFGDRIISRDESG--S----PHTKSLLRLFPA 125 (156)
T ss_pred EEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHh---CcCCCeeccEEEEeccCC--C----CccccHHHHcCC
Confidence 347899999999999965 999999999999999999999 777 478 5555 3322 1 122334 34577
Q ss_pred CCCCcEEEEecCHh
Q 009774 475 DKPSEILFVTDVYQ 488 (526)
Q Consensus 475 ~~p~~~l~VgDs~~ 488 (526)
+ .+.+++|+|++.
T Consensus 126 d-~~~vvivDd~~~ 138 (156)
T TIGR02250 126 D-ESMVVIIDDRED 138 (156)
T ss_pred C-cccEEEEeCCHH
Confidence 6 899999999984
No 178
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=97.30 E-value=0.0012 Score=65.05 Aligned_cols=46 Identities=15% Similarity=0.293 Sum_probs=39.7
Q ss_pred cCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 009774 456 VGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVI 502 (526)
Q Consensus 456 ~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~ 502 (526)
...--+-...+.+++.++++ ++++++|||+.+|+...+.+|+..+.
T Consensus 184 ~~~~~K~~~i~~~~~~~~~~-~~~~~~~GD~~nD~~m~~~~~~~~a~ 229 (256)
T TIGR00099 184 AKGVSKGSALQSLAEALGIS-LEDVIAFGDGMNDIEMLEAAGYGVAM 229 (256)
T ss_pred CCCCChHHHHHHHHHHcCCC-HHHEEEeCCcHHhHHHHHhCCceeEe
Confidence 33444578899999999997 99999999999999999999987554
No 179
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=97.22 E-value=0.00085 Score=57.61 Aligned_cols=111 Identities=14% Similarity=0.177 Sum_probs=82.5
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEE
Q 009774 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL 481 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l 481 (526)
++|+.+.+.++.|++. +.++|.|....-......+.. |+.- +.++ .--+|+.=.++++.|+-. -+.|+
T Consensus 30 klf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~---gi~~--~rv~-----a~a~~e~K~~ii~eLkk~-~~k~v 97 (152)
T COG4087 30 KLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFV---GIPV--ERVF-----AGADPEMKAKIIRELKKR-YEKVV 97 (152)
T ss_pred EEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHc---CCce--eeee-----cccCHHHHHHHHHHhcCC-CcEEE
Confidence 7999999999999999 999999998888877777777 6432 2222 233556667788888874 89999
Q ss_pred EEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecCCC
Q 009774 482 FVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFA 524 (526)
Q Consensus 482 ~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~ 524 (526)
||||..+|+.+-+++-+-.+-+..++-+...-..+|.++.+..
T Consensus 98 mVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~ 140 (152)
T COG4087 98 MVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIA 140 (152)
T ss_pred EecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHH
Confidence 9999999999999998876666655443332233366665543
No 180
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=97.17 E-value=0.0083 Score=59.00 Aligned_cols=102 Identities=17% Similarity=0.270 Sum_probs=75.3
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceE----------------------E-eC--CcC
Q 009774 403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGF----------------------F-DT--AVG 457 (526)
Q Consensus 403 l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i----------------------~-~~--~~~ 457 (526)
.-+++.++++.|+++|+++..+|..+.......++.|...|+. |+.. + +. ...
T Consensus 82 ie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~--fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~ 159 (252)
T PF11019_consen 82 IESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGID--FSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTG 159 (252)
T ss_pred cchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCC--ccccccccCcceecccccCCCCCCceeecCeEEeC
Confidence 3479999999999999999999999988777666655433543 1111 0 00 112
Q ss_pred CCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHH----HHHHcCCcEEEEeCCC
Q 009774 458 NKRETPSYVEITNSLGVDKPSEILFVTDVYQEAT----AAKAAGLEVVISIRPG 507 (526)
Q Consensus 458 ~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~----~A~~aG~~~i~v~~~~ 507 (526)
.-++-+.+...+.++|.. |+.++||+|+...+. ++++.|+..+++.+.+
T Consensus 160 ~~~KG~~L~~fL~~~~~~-pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt~ 212 (252)
T PF11019_consen 160 GQDKGEVLKYFLDKINQS-PKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYTG 212 (252)
T ss_pred CCccHHHHHHHHHHcCCC-CCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEcc
Confidence 345568999999999997 999999999996654 4566799888887763
No 181
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=97.13 E-value=0.00071 Score=78.72 Aligned_cols=114 Identities=15% Similarity=0.141 Sum_probs=79.6
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCccccc----ceEEe------------------CCcCCC
Q 009774 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL----SGFFD------------------TAVGNK 459 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~f----d~i~~------------------~~~~~K 459 (526)
+|+|++.++++.|++.|+++.++|+.+......+.+.+ |+...= ...++ .....+
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~---gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar 613 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRI---GIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSR 613 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHc---CCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEe
Confidence 68999999999999999999999999999999999999 774310 01111 011223
Q ss_pred CCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCCCCCCCCCCCCCeEecC
Q 009774 460 RETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINS 522 (526)
Q Consensus 460 P~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~i~~ 522 (526)
-.|+-=.++.+.++-. .+.+.|+||+.+|+.+.++|++. |.+.. ++. .....+|+++.+
T Consensus 614 ~~P~~K~~iV~~lq~~-g~~va~iGDG~ND~~alk~AdVG-ia~g~-g~~-~ak~aAD~vl~d 672 (917)
T TIGR01116 614 VEPSHKSELVELLQEQ-GEIVAMTGDGVNDAPALKKADIG-IAMGS-GTE-VAKEASDMVLAD 672 (917)
T ss_pred cCHHHHHHHHHHHHhc-CCeEEEecCCcchHHHHHhCCee-EECCC-CcH-HHHHhcCeEEcc
Confidence 3344446677777765 88999999999999999999993 32222 221 222334777765
No 182
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=97.11 E-value=0.00082 Score=66.87 Aligned_cols=35 Identities=11% Similarity=0.292 Sum_probs=27.1
Q ss_pred HHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 009774 467 EITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVI 502 (526)
Q Consensus 467 ~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~ 502 (526)
.+++.+|++ +++++.|||+.+|+..-+.+|...+.
T Consensus 195 ~l~~~~gi~-~~~v~afGD~~NDi~Ml~~ag~~vAm 229 (272)
T PRK15126 195 VLSQHLGLS-LADCMAFGDAMNDREMLGSVGRGFIM 229 (272)
T ss_pred HHHHHhCCC-HHHeEEecCCHHHHHHHHHcCCceec
Confidence 455666786 88899999999999988888874443
No 183
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=97.10 E-value=0.00086 Score=66.41 Aligned_cols=41 Identities=20% Similarity=0.301 Sum_probs=34.1
Q ss_pred HHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEe
Q 009774 463 PSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISI 504 (526)
Q Consensus 463 ~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~ 504 (526)
...+.+++.+|++ +++++.|||+.+|+..=+.+|...+.-+
T Consensus 192 ~al~~l~~~lgi~-~~~v~afGD~~ND~~Ml~~ag~gvam~N 232 (264)
T COG0561 192 YALQRLAKLLGIK-LEEVIAFGDSTNDIEMLEVAGLGVAMGN 232 (264)
T ss_pred HHHHHHHHHhCCC-HHHeEEeCCccccHHHHHhcCeeeeccC
Confidence 3556678889997 9999999999999999999988766543
No 184
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=97.08 E-value=0.0012 Score=65.51 Aligned_cols=17 Identities=24% Similarity=0.344 Sum_probs=15.0
Q ss_pred CCceEEEEecccccccc
Q 009774 282 LFPRCIVLDIEGTTTPI 298 (526)
Q Consensus 282 ~~ikaVlFD~DGTL~d~ 298 (526)
|++|.|+|||||||++.
T Consensus 1 m~~kli~~DlDGTLl~~ 17 (270)
T PRK10513 1 MAIKLIAIDMDGTLLLP 17 (270)
T ss_pred CceEEEEEecCCcCcCC
Confidence 46899999999999874
No 185
>PRK10976 putative hydrolase; Provisional
Probab=96.99 E-value=0.0013 Score=65.22 Aligned_cols=36 Identities=17% Similarity=0.258 Sum_probs=29.5
Q ss_pred HHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 009774 466 VEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVI 502 (526)
Q Consensus 466 ~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~ 502 (526)
+.+++.+|++ +++++.|||+.+|+..-+.+|...+.
T Consensus 196 ~~l~~~lgi~-~~~viafGD~~NDi~Ml~~ag~~vAm 231 (266)
T PRK10976 196 EAVAKKLGYS-LKDCIAFGDGMNDAEMLSMAGKGCIM 231 (266)
T ss_pred HHHHHHcCCC-HHHeEEEcCCcccHHHHHHcCCCeee
Confidence 3455677886 99999999999999999999986554
No 186
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=96.93 E-value=0.0035 Score=59.67 Aligned_cols=85 Identities=15% Similarity=0.133 Sum_probs=56.7
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHH-HHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCc
Q 009774 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLA-QRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE 479 (526)
Q Consensus 401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~-~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~ 479 (526)
..+.||+.++|+...++|.++..+||...+. ....++.+...|+...-..-+---...|++..-++.+-+ . -+-
T Consensus 121 sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~~~llkk~~k~Ke~R~~~v~k----~-~~i 195 (274)
T COG2503 121 SKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLESHLLLKKDKKSKEVRRQAVEK----D-YKI 195 (274)
T ss_pred cccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccccceEEeeCCCcHHHHHHHHhh----c-cce
Confidence 3689999999999999999999999998876 555555443225553333221001234555555555555 2 347
Q ss_pred EEEEecCHhhH
Q 009774 480 ILFVTDVYQEA 490 (526)
Q Consensus 480 ~l~VgDs~~Di 490 (526)
+++|||+..|-
T Consensus 196 Vm~vGDNl~DF 206 (274)
T COG2503 196 VMLVGDNLDDF 206 (274)
T ss_pred eeEecCchhhh
Confidence 89999998764
No 187
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=96.92 E-value=0.0029 Score=64.69 Aligned_cols=85 Identities=15% Similarity=0.148 Sum_probs=53.3
Q ss_pred cCCCHHHHHHHHHHC----CCeEEEEeCch---HHH-HHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCC
Q 009774 403 VFDDVPEALEKWHSL----GTKVYIYSSGS---RLA-QRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGV 474 (526)
Q Consensus 403 l~pgv~~~L~~L~~~----G~~l~vvTn~~---~~~-~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~ 474 (526)
++|++.++|+.|+++ |+++.++||+. ... .+.+.+.+ |+.---+.++.+. ......++..
T Consensus 17 ~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~l---G~~~~~~~i~~s~-------~~~~~ll~~~-- 84 (321)
T TIGR01456 17 PIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLL---GVDVSPLQVIQSH-------SPYKSLVNKY-- 84 (321)
T ss_pred ccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHc---CCCCCHHHHHhhh-------HHHHHHHHHc--
Confidence 457778888889888 99999999996 333 44444777 6643333333221 1234444443
Q ss_pred CCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 009774 475 DKPSEILFVTDVYQEATAAKAAGLEVVI 502 (526)
Q Consensus 475 ~~p~~~l~VgDs~~Di~~A~~aG~~~i~ 502 (526)
. . .++.||.+. -.+.+..+|+..+.
T Consensus 85 ~-~-~v~viG~~~-~~~~l~~~G~~~vv 109 (321)
T TIGR01456 85 E-K-RILAVGTGS-VRGVAEGYGFQNVV 109 (321)
T ss_pred C-C-ceEEEeChH-HHHHHHHcCCcccc
Confidence 2 2 678888654 46666789987664
No 188
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=96.90 E-value=0.0017 Score=64.33 Aligned_cols=37 Identities=16% Similarity=0.180 Sum_probs=30.9
Q ss_pred HHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCccc
Q 009774 407 VPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK 446 (526)
Q Consensus 407 v~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~ 446 (526)
+.+.|++|+++|++++++|+.+...+..+.+.+ ++..
T Consensus 23 a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~L---gl~~ 59 (302)
T PRK12702 23 ARQALAALERRSIPLVLYSLRTRAQLEHLCRQL---RLEH 59 (302)
T ss_pred HHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHh---CCCC
Confidence 447788889999999999999998888888888 6654
No 189
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=96.76 E-value=0.0029 Score=62.95 Aligned_cols=38 Identities=13% Similarity=0.023 Sum_probs=31.3
Q ss_pred HHHHHHHcCC---CCCCcEEEEecCHhhHHHHHHcCCcEEEE
Q 009774 465 YVEITNSLGV---DKPSEILFVTDVYQEATAAKAAGLEVVIS 503 (526)
Q Consensus 465 ~~~~~~~l~~---~~p~~~l~VgDs~~Di~~A~~aG~~~i~v 503 (526)
.+.+++.+|+ + +++++.|||+.+|+..=+.+|...+.-
T Consensus 192 l~~l~~~lgi~~~~-~~~viafGDs~NDi~Ml~~ag~gvAM~ 232 (271)
T PRK03669 192 ANWLIATYQQLSGT-RPTTLGLGDGPNDAPLLDVMDYAVVVK 232 (271)
T ss_pred HHHHHHHHHhhcCC-CceEEEEcCCHHHHHHHHhCCEEEEec
Confidence 4556777888 8 999999999999999999999755543
No 190
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=96.76 E-value=0.0076 Score=58.95 Aligned_cols=80 Identities=19% Similarity=0.176 Sum_probs=62.9
Q ss_pred CCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeC---Cc----C--------------------
Q 009774 405 DDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDT---AV----G-------------------- 457 (526)
Q Consensus 405 pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~---~~----~-------------------- 457 (526)
|.+.+.|..||++|+-+++=|-++++.++..++.+ +|.++||.++.. .+ .
T Consensus 145 ~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~---~L~~~Fd~ii~~G~~~~~~~~~~~~d~~~~~~f~~~~FylDv 221 (297)
T PF05152_consen 145 PAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKEL---KLEGYFDIIICGGNKAGEYNSRVIVDRQYKVIFVSKPFYLDV 221 (297)
T ss_pred hHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHh---CCccccEEEEeCCccCCcCCccceeecccceEEeccceEEeC
Confidence 66778899999999999999999999999999999 999999999821 00 0
Q ss_pred -----CCCCHHHHHHHHHHcCCCCCCcEEEEecCH
Q 009774 458 -----NKRETPSYVEITNSLGVDKPSEILFVTDVY 487 (526)
Q Consensus 458 -----~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~ 487 (526)
-...|.+.+..+++.|+.--..+-.|+|-.
T Consensus 222 ~~~~~LPKSPrVVL~yL~k~gvny~KtiTLVDDL~ 256 (297)
T PF05152_consen 222 TNVNNLPKSPRVVLWYLRKKGVNYFKTITLVDDLK 256 (297)
T ss_pred CcCCCCCCCCeehHHHHHHcCCceeeeEEEeccCc
Confidence 123577888888888885235666777765
No 191
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=96.70 E-value=0.003 Score=61.15 Aligned_cols=34 Identities=29% Similarity=0.285 Sum_probs=26.0
Q ss_pred CHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhc
Q 009774 406 DVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNS 439 (526)
Q Consensus 406 gv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l 439 (526)
.+.++|++|+++|++++++|+.+.......++.+
T Consensus 19 ~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~l 52 (225)
T TIGR02461 19 PAREALEELKDLGFPIVFVSSKTRAEQEYYREEL 52 (225)
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHc
Confidence 3456777788888888888888877777777777
No 192
>PTZ00174 phosphomannomutase; Provisional
Probab=96.70 E-value=0.0032 Score=61.79 Aligned_cols=19 Identities=21% Similarity=0.366 Sum_probs=16.5
Q ss_pred CCCceEEEEeccccccccc
Q 009774 281 GLFPRCIVLDIEGTTTPIS 299 (526)
Q Consensus 281 ~~~ikaVlFD~DGTL~d~~ 299 (526)
.|.+|.|+|||||||++..
T Consensus 2 ~~~~klia~DlDGTLL~~~ 20 (247)
T PTZ00174 2 EMKKTILLFDVDGTLTKPR 20 (247)
T ss_pred CCCCeEEEEECcCCCcCCC
Confidence 4779999999999999754
No 193
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=96.63 E-value=0.02 Score=51.48 Aligned_cols=91 Identities=19% Similarity=0.209 Sum_probs=64.4
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcc-cccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEE
Q 009774 403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLR-KYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL 481 (526)
Q Consensus 403 l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~-~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l 481 (526)
+-.++...|..++++ .+++.+|....+..+....-+ ... -.+|.+.-.....| ..+.+..+++ +
T Consensus 73 ~~q~v~~~L~~~~e~-~~L~~itar~~dl~~iT~~~l---~~q~ih~~~l~i~g~h~K------V~~vrth~id-----l 137 (194)
T COG5663 73 LAQLVKQVLPSLKEE-HRLIYITARKADLTRITYAWL---FIQNIHYDHLEIVGLHHK------VEAVRTHNID-----L 137 (194)
T ss_pred HHHHHHHHhHHHHhh-ceeeeeehhhHHHHHHHHHHH---HHhccchhhhhhhccccc------chhhHhhccC-----c
Confidence 446888999999987 589999998887766554444 111 12344331122334 4567788887 8
Q ss_pred EEecCH-hhHHHHHHcCCcEEEEeCCCC
Q 009774 482 FVTDVY-QEATAAKAAGLEVVISIRPGN 508 (526)
Q Consensus 482 ~VgDs~-~Di~~A~~aG~~~i~v~~~~~ 508 (526)
++.|+. +-+..|+++|++.+.++.+.+
T Consensus 138 f~ed~~~na~~iAk~~~~~vilins~yn 165 (194)
T COG5663 138 FFEDSHDNAGQIAKNAGIPVILINSPYN 165 (194)
T ss_pred cccccCchHHHHHHhcCCcEEEecCccc
Confidence 999998 788999999999999998744
No 194
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=96.41 E-value=0.014 Score=55.92 Aligned_cols=77 Identities=13% Similarity=0.047 Sum_probs=51.6
Q ss_pred CCeEEE-EeCchHHHHHHHHhhcCCCCcc----cccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHH
Q 009774 418 GTKVYI-YSSGSRLAQRLIFGNSNYGDLR----KYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATA 492 (526)
Q Consensus 418 G~~l~v-vTn~~~~~~~~~l~~l~~~gl~----~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~ 492 (526)
++.+.+ .++.........++.. ++. .+|..+.. ....|+ .....+++.+|++ +++|++|||+.+|+..
T Consensus 138 ~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~ei~~-~~~~Kg--~al~~l~~~lgi~-~~~vi~~GD~~NDi~m 210 (221)
T TIGR02463 138 SVPLLWRDSDSRMPRFTALLADL---GLAIVQGNRFSHVLG-ASSSKG--KAANWLKATYNQP-DVKTLGLGDGPNDLPL 210 (221)
T ss_pred CccEEecCchhHHHHHHHHHHHc---CCeEEecCCeeEEec-CCCCHH--HHHHHHHHHhCCC-CCcEEEECCCHHHHHH
Confidence 333333 3444555555566655 554 33333331 122344 5689999999997 9999999999999999
Q ss_pred HHHcCCcEE
Q 009774 493 AKAAGLEVV 501 (526)
Q Consensus 493 A~~aG~~~i 501 (526)
.+.+|...+
T Consensus 211 l~~ag~~va 219 (221)
T TIGR02463 211 LEVADYAVV 219 (221)
T ss_pred HHhCCceEE
Confidence 999997654
No 195
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=96.27 E-value=0.0055 Score=53.42 Aligned_cols=29 Identities=28% Similarity=0.282 Sum_probs=24.0
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHHH
Q 009774 403 VFDDVPEALEKWHSLGTKVYIYSSGSRLA 431 (526)
Q Consensus 403 l~pgv~~~L~~L~~~G~~l~vvTn~~~~~ 431 (526)
+.+++.+.|++|+++|+.++++|..+...
T Consensus 25 ~~~~~ie~L~~l~~~G~~IiiaTGR~~~~ 53 (126)
T TIGR01689 25 PILAVIEKLRHYKALGFEIVISSSRNMRT 53 (126)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCCchh
Confidence 45677788999999999999999887654
No 196
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=96.26 E-value=0.0075 Score=57.92 Aligned_cols=36 Identities=14% Similarity=0.137 Sum_probs=31.4
Q ss_pred HHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcc
Q 009774 407 VPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLR 445 (526)
Q Consensus 407 v~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~ 445 (526)
..++|++|+++|++++++||.+...+...++.+ ++.
T Consensus 21 ~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l---~~~ 56 (221)
T TIGR02463 21 AAPWLTRLQEAGIPVILCTSKTAAEVEYLQKAL---GLT 56 (221)
T ss_pred HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc---CCC
Confidence 447788889999999999999999999999998 664
No 197
>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=96.21 E-value=0.007 Score=60.29 Aligned_cols=101 Identities=11% Similarity=0.078 Sum_probs=74.7
Q ss_pred CCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE-e-C---Cc--CCCC----CHH----H----
Q 009774 404 FDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF-D-T---AV--GNKR----ETP----S---- 464 (526)
Q Consensus 404 ~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~-~-~---~~--~~KP----~p~----~---- 464 (526)
-|....+|++|+++|.++.++||+|-..+..-++.+-...+.++||.++ . . .. ..|| +.+ .
T Consensus 242 ~~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~KP~Fftde~rPfR~~dek~~sl~wdkv 321 (510)
T KOG2470|consen 242 NPQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQANKPEFFTDERRPFRKYDEKRGSLLWDKV 321 (510)
T ss_pred cHHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEecCCCcccccccCcchhhcccccchhhhhh
Confidence 4778899999999999999999999999998888887778999999887 1 1 11 1112 111 1
Q ss_pred -------------HHHHHHHcCCCCCCcEEEEecCH-hhHHHHH-HcCCcEEEEeC
Q 009774 465 -------------YVEITNSLGVDKPSEILFVTDVY-QEATAAK-AAGLEVVISIR 505 (526)
Q Consensus 465 -------------~~~~~~~l~~~~p~~~l~VgDs~-~Di~~A~-~aG~~~i~v~~ 505 (526)
....++--|-. ..+++|+||++ +|+..-. +.|+++-.+..
T Consensus 322 ~klekgkiYy~G~l~~flelt~Wr-G~~VlYFGDHlySDLad~tlkhgWRTgAII~ 376 (510)
T KOG2470|consen 322 DKLEKGKIYYQGNLKSFLELTGWR-GPRVLYFGDHLYSDLADLTLKHGWRTGAIIP 376 (510)
T ss_pred hhcccCceeeeccHHHHHHHhccC-CCeeEEecCcchhhhhhhHhhcccccccchH
Confidence 11233444564 78999999999 8998776 89998876654
No 198
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=96.16 E-value=0.013 Score=65.22 Aligned_cols=88 Identities=14% Similarity=0.228 Sum_probs=68.9
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEE
Q 009774 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL 481 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l 481 (526)
++.||+.+.+++|++.|+++.++|..+......+.+.+ |+.++|. ..+| +-=..+.+++.-. ...+.
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~l---GI~~v~a-------~~~P--edK~~~v~~lq~~-g~~Va 512 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEA---GVDDFIA-------EATP--EDKIALIRQEQAE-GKLVA 512 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc---CCCEEEc-------CCCH--HHHHHHHHHHHHc-CCeEE
Confidence 68899999999999999999999999999999999999 8864332 2233 2223344444443 56799
Q ss_pred EEecCHhhHHHHHHcCCcEEE
Q 009774 482 FVTDVYQEATAAKAAGLEVVI 502 (526)
Q Consensus 482 ~VgDs~~Di~~A~~aG~~~i~ 502 (526)
|+||..+|..+-+++++....
T Consensus 513 mvGDG~NDapAL~~AdvGiAm 533 (675)
T TIGR01497 513 MTGDGTNDAPALAQADVGVAM 533 (675)
T ss_pred EECCCcchHHHHHhCCEeEEe
Confidence 999999999999999876543
No 199
>PLN02887 hydrolase family protein
Probab=96.08 E-value=0.01 Score=65.19 Aligned_cols=35 Identities=31% Similarity=0.455 Sum_probs=29.2
Q ss_pred HHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 009774 467 EITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVI 502 (526)
Q Consensus 467 ~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~ 502 (526)
.+++.+|++ +++++.|||+.+|+..-+.+|...+.
T Consensus 514 ~L~e~lGI~-~eeviAFGDs~NDIeMLe~AG~gVAM 548 (580)
T PLN02887 514 MLLNHLGVS-PDEIMAIGDGENDIEMLQLASLGVAL 548 (580)
T ss_pred HHHHHcCCC-HHHEEEEecchhhHHHHHHCCCEEEe
Confidence 345677887 99999999999999999999985544
No 200
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=96.01 E-value=0.011 Score=57.14 Aligned_cols=37 Identities=22% Similarity=0.353 Sum_probs=29.3
Q ss_pred HHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEE
Q 009774 464 SYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV 501 (526)
Q Consensus 464 ~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i 501 (526)
..+.+++.+|++ +++++.|||+.+|+..-+.+|...+
T Consensus 190 ai~~l~~~~~i~-~~~~~~~GD~~ND~~Ml~~~~~~~a 226 (254)
T PF08282_consen 190 AIKYLLEYLGIS-PEDIIAFGDSENDIEMLELAGYSVA 226 (254)
T ss_dssp HHHHHHHHHTTS-GGGEEEEESSGGGHHHHHHSSEEEE
T ss_pred HHHHHhhhcccc-cceeEEeecccccHhHHhhcCeEEE
Confidence 445566777886 8899999999999999988887644
No 201
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=95.93 E-value=0.37 Score=52.08 Aligned_cols=88 Identities=14% Similarity=0.104 Sum_probs=51.5
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhh-cCCCCcccc--------cceEEeCCcCCC-C--CHHHHHHHHH
Q 009774 403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGN-SNYGDLRKY--------LSGFFDTAVGNK-R--ETPSYVEITN 470 (526)
Q Consensus 403 l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~-l~~~gl~~~--------fd~i~~~~~~~K-P--~p~~~~~~~~ 470 (526)
++|.+.+ .++++|.. +|+|.+++..++.+++. + |++.. .++.+....... + -.+-...+.+
T Consensus 111 l~~~a~~---~~~~~g~~-vvVSASp~~~Vepfa~~~L---Gid~VIgTeLev~~~G~~TG~i~g~~~c~Ge~Kv~rl~~ 183 (497)
T PLN02177 111 VHPETWR---VFNSFGKR-YIITASPRIMVEPFVKTFL---GADKVLGTELEVSKSGRATGFMKKPGVLVGDHKRDAVLK 183 (497)
T ss_pred cCHHHHH---HHHhCCCE-EEEECCcHHHHHHHHHHcC---CCCEEEecccEECcCCEEeeeecCCCCCccHHHHHHHHH
Confidence 4555544 44567754 99999999999999975 6 54422 122220000000 1 0112333445
Q ss_pred HcCCCCCCcEEEEecCHhhHHHHHHcCCc
Q 009774 471 SLGVDKPSEILFVTDVYQEATAAKAAGLE 499 (526)
Q Consensus 471 ~l~~~~p~~~l~VgDs~~Di~~A~~aG~~ 499 (526)
.+|.+ ... +..|||.+|..--..++=.
T Consensus 184 ~~g~~-~~~-~aYgDS~sD~plL~~a~e~ 210 (497)
T PLN02177 184 EFGDA-LPD-LGLGDRETDHDFMSICKEG 210 (497)
T ss_pred HhCCC-Cce-EEEECCccHHHHHHhCCcc
Confidence 56653 334 8999999999888877743
No 202
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=95.90 E-value=0.019 Score=64.21 Aligned_cols=84 Identities=24% Similarity=0.288 Sum_probs=67.1
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEE
Q 009774 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL 481 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l 481 (526)
.+.|++.+.+++||++|+++.++|+-++...+.+.+.+ |+++++-.. +|+- =....+++.-. -..+.
T Consensus 537 ~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~l---GId~v~Ael-------lPed--K~~~V~~l~~~-g~~Va 603 (713)
T COG2217 537 ELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKEL---GIDEVRAEL-------LPED--KAEIVRELQAE-GRKVA 603 (713)
T ss_pred CCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc---ChHhheccC-------CcHH--HHHHHHHHHhc-CCEEE
Confidence 68899999999999999999999999999999999999 886654443 3321 23455555554 57899
Q ss_pred EEecCHhhHHHHHHcCC
Q 009774 482 FVTDVYQEATAAKAAGL 498 (526)
Q Consensus 482 ~VgDs~~Di~~A~~aG~ 498 (526)
||||..||..+=..|-+
T Consensus 604 mVGDGINDAPALA~AdV 620 (713)
T COG2217 604 MVGDGINDAPALAAADV 620 (713)
T ss_pred EEeCCchhHHHHhhcCe
Confidence 99999999977776654
No 203
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=95.89 E-value=0.023 Score=63.45 Aligned_cols=85 Identities=12% Similarity=0.199 Sum_probs=68.4
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEE
Q 009774 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL 481 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l 481 (526)
++.||+.+.+++||+.|+++.++|+-+......+.+.+ |+.++|.. .+| +-=.++.+.+.-. .+-+.
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~el---GI~~v~A~-------~~P--edK~~iV~~lQ~~-G~~Va 507 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEA---GVDRFVAE-------CKP--EDKINVIREEQAK-GHIVA 507 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc---CCceEEcC-------CCH--HHHHHHHHHHHhC-CCEEE
Confidence 68899999999999999999999999999999999999 88653322 233 3334455555554 56799
Q ss_pred EEecCHhhHHHHHHcCCc
Q 009774 482 FVTDVYQEATAAKAAGLE 499 (526)
Q Consensus 482 ~VgDs~~Di~~A~~aG~~ 499 (526)
|+||..||..+=++|.+-
T Consensus 508 MtGDGvNDAPALa~ADVG 525 (673)
T PRK14010 508 MTGDGTNDAPALAEANVG 525 (673)
T ss_pred EECCChhhHHHHHhCCEE
Confidence 999999999999999774
No 204
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=95.68 E-value=0.021 Score=56.28 Aligned_cols=39 Identities=10% Similarity=0.059 Sum_probs=30.5
Q ss_pred HHHHHHHcCCCC--CCcEEEEecCHhhHHHHHHcCCcEEEEe
Q 009774 465 YVEITNSLGVDK--PSEILFVTDVYQEATAAKAAGLEVVISI 504 (526)
Q Consensus 465 ~~~~~~~l~~~~--p~~~l~VgDs~~Di~~A~~aG~~~i~v~ 504 (526)
.+++++.+++ + ++++++|||+.+|+...+.+|...+.-+
T Consensus 181 i~~l~~~~~i-~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~N 221 (256)
T TIGR01486 181 ANALKQFYNQ-PGGAIKVVGLGDSPNDLPLLEVVDLAVVVPG 221 (256)
T ss_pred HHHHHHHHhh-cCCCceEEEEcCCHhhHHHHHHCCEEEEeCC
Confidence 3455666676 5 7889999999999999999998766544
No 205
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=95.67 E-value=0.028 Score=62.80 Aligned_cols=87 Identities=14% Similarity=0.192 Sum_probs=68.3
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEE
Q 009774 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL 481 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l 481 (526)
++.||+.+.+++||+.|+++.++|+.+....+.+.+.+ |+.++|- ..+| +-=..+.+++.-. .+-+.
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~el---GId~v~A-------~~~P--edK~~iV~~lQ~~-G~~Va 511 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEA---GVDDFLA-------EATP--EDKLALIRQEQAE-GRLVA 511 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc---CCcEEEc-------cCCH--HHHHHHHHHHHHc-CCeEE
Confidence 67899999999999999999999999999999999999 8865322 1233 2234445555554 56799
Q ss_pred EEecCHhhHHHHHHcCCcEE
Q 009774 482 FVTDVYQEATAAKAAGLEVV 501 (526)
Q Consensus 482 ~VgDs~~Di~~A~~aG~~~i 501 (526)
|+||..+|..+-++|.+-..
T Consensus 512 MtGDGvNDAPALa~ADVGIA 531 (679)
T PRK01122 512 MTGDGTNDAPALAQADVGVA 531 (679)
T ss_pred EECCCcchHHHHHhCCEeEE
Confidence 99999999999999876443
No 206
>PLN02423 phosphomannomutase
Probab=95.50 E-value=0.085 Score=51.70 Aligned_cols=31 Identities=19% Similarity=0.079 Sum_probs=27.4
Q ss_pred CCCCcEEEEec----CHhhHHHHHHcCCcEEEEeCC
Q 009774 475 DKPSEILFVTD----VYQEATAAKAAGLEVVISIRP 506 (526)
Q Consensus 475 ~~p~~~l~VgD----s~~Di~~A~~aG~~~i~v~~~ 506 (526)
+ +++++.+|| +.+|++.-+.-|+.++-|..+
T Consensus 199 ~-~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~ 233 (245)
T PLN02423 199 D-FDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSP 233 (245)
T ss_pred C-cCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCH
Confidence 7 999999999 689999988889999888654
No 207
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=95.47 E-value=0.054 Score=55.13 Aligned_cols=95 Identities=18% Similarity=0.241 Sum_probs=64.5
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHH--------H----HHHHHhhcCCCCcccccceEEe--CCcCCCCCHHHHHH
Q 009774 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRL--------A----QRLIFGNSNYGDLRKYLSGFFD--TAVGNKRETPSYVE 467 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~--------~----~~~~l~~l~~~gl~~~fd~i~~--~~~~~KP~p~~~~~ 467 (526)
.++|.+..=|+.|.+.||++++.||.... . .+.+...+ ++. |..... ....+||-..++..
T Consensus 104 ~l~~~vp~Klktl~~~g~~l~iftnq~~i~r~~~~~~~f~~Ki~~i~anl---~vP--i~~~~A~~~~~yRKP~tGMwe~ 178 (422)
T KOG2134|consen 104 ILFPEVPSKLKTLYQDGIKLFIFTNQNGIARGKLELEEFKKKIKAIVANL---GVP--IQLLAAIIKGKYRKPSTGMWEF 178 (422)
T ss_pred eeccccchhhhhhccCCeEEEEEecccccccCcchHHHHHHHHHHHHHhc---CCc--eEEeeeccCCcccCcchhHHHH
Confidence 37788899999999999999999998522 2 22223333 322 222221 23568999999999
Q ss_pred HHHHcCCC---CCCcEEEEecC---------------HhhHHHHHHcCCcEE
Q 009774 468 ITNSLGVD---KPSEILFVTDV---------------YQEATAAKAAGLEVV 501 (526)
Q Consensus 468 ~~~~l~~~---~p~~~l~VgDs---------------~~Di~~A~~aG~~~i 501 (526)
.++.++-. .-..+.||||. ..|+.-|.++|+...
T Consensus 179 ~~~~~nd~~~Isek~s~fvgdaagr~~~~~~~kkd~S~~D~~FAaN~gvkF~ 230 (422)
T KOG2134|consen 179 LKRLENDSVEISEKASIFVGDAAGRPLDALRRKKDHSSADRKFAANAGVKFK 230 (422)
T ss_pred HHHHhhccceeeechhhhhhhhccCccccccCcccccHHHHHHHHhcCCccC
Confidence 88776532 04566788873 357889999999765
No 208
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=95.30 E-value=0.032 Score=61.54 Aligned_cols=31 Identities=16% Similarity=0.040 Sum_probs=22.5
Q ss_pred HHHHHHHHCCCeEEEEeCchHHHHHHHHhhc
Q 009774 409 EALEKWHSLGTKVYIYSSGSRLAQRLIFGNS 439 (526)
Q Consensus 409 ~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l 439 (526)
+.|++|+++|++++++|+.+...+...++.+
T Consensus 440 eAL~~L~ekGI~~VIATGRs~~~i~~l~~~L 470 (694)
T PRK14502 440 DALRLLKDKELPLVFCSAKTMGEQDLYRNEL 470 (694)
T ss_pred HHHHHHHHcCCeEEEEeCCCHHHHHHHHHHc
Confidence 5566777777777777777777766666666
No 209
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=95.21 E-value=0.14 Score=51.26 Aligned_cols=88 Identities=16% Similarity=0.253 Sum_probs=59.8
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCch---HHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774 402 EVFDDVPEALEKWHSLGTKVYIYSSGS---RLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPS 478 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~---~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~ 478 (526)
.++||+.++|++|+++|++++++||++ +......++.+ |+....+.++. ........+++.... +.
T Consensus 18 ~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~---G~~~~~~~i~t-------s~~~~~~~l~~~~~~-~~ 86 (279)
T TIGR01452 18 RVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARL---GFNGLAEQLFS-------SALCAARLLRQPPDA-PK 86 (279)
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHc---CCCCChhhEec-------HHHHHHHHHHhhCcC-CC
Confidence 488999999999999999999999965 33333466777 77544444441 123344556665554 67
Q ss_pred cEEEEecCHhhHHHHHHcCCcEE
Q 009774 479 EILFVTDVYQEATAAKAAGLEVV 501 (526)
Q Consensus 479 ~~l~VgDs~~Di~~A~~aG~~~i 501 (526)
++++||+. ......+..|+..+
T Consensus 87 ~v~~iG~~-~~~~~l~~~g~~~~ 108 (279)
T TIGR01452 87 AVYVIGEE-GLRAELDAAGIRLA 108 (279)
T ss_pred EEEEEcCH-HHHHHHHHCCCEEe
Confidence 89999985 33445567788754
No 210
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=95.05 E-value=0.014 Score=53.04 Aligned_cols=82 Identities=23% Similarity=0.242 Sum_probs=56.4
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCc-ccccceEE--eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDL-RKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 477 (526)
Q Consensus 401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl-~~~fd~i~--~~~~~~KP~p~~~~~~~~~l~~~~p 477 (526)
+.+.||+.++|+.|.+. |.++|.|++....++.+++.+ .- ..+|+.++ +.+...+. .+.+-++.++-+ .
T Consensus 35 v~~RP~l~~FL~~l~~~-~ev~i~T~~~~~ya~~v~~~l---dp~~~~~~~~~~r~~~~~~~~---~~~KdL~~l~~~-~ 106 (159)
T PF03031_consen 35 VKLRPGLDEFLEELSKH-YEVVIWTSASEEYAEPVLDAL---DPNGKLFSRRLYRDDCTFDKG---SYIKDLSKLGRD-L 106 (159)
T ss_dssp EEE-TTHHHHHHHHHHH-CEEEEE-SS-HHHHHHHHHHH---TTTTSSEEEEEEGGGSEEETT---EEE--GGGSSS--G
T ss_pred EeeCchHHHHHHHHHHh-ceEEEEEeehhhhhhHHHHhh---hhhcccccccccccccccccc---ccccchHHHhhc-c
Confidence 35789999999999775 999999999999999999998 44 46788777 22221111 112566677876 8
Q ss_pred CcEEEEecCHhhH
Q 009774 478 SEILFVTDVYQEA 490 (526)
Q Consensus 478 ~~~l~VgDs~~Di 490 (526)
+++++|+|++.-.
T Consensus 107 ~~vvivDD~~~~~ 119 (159)
T PF03031_consen 107 DNVVIVDDSPRKW 119 (159)
T ss_dssp GGEEEEES-GGGG
T ss_pred ccEEEEeCCHHHe
Confidence 9999999998643
No 211
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=95.03 E-value=0.027 Score=55.09 Aligned_cols=59 Identities=7% Similarity=-0.077 Sum_probs=46.4
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHc-------CCcEEEEeCCCCCCCCCCCCCeEecCCCC
Q 009774 462 TPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAA-------GLEVVISIRPGNGPLPENHGFKTINSFAE 525 (526)
Q Consensus 462 p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~a-------G~~~i~v~~~~~~~~~~~~~~~~i~~l~e 525 (526)
...+..++++++.. +++++||||+.+|+.+++.+ |..++.+..+. ....+++++++..|
T Consensus 169 g~a~~~~~~~~~~~-~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~----~~~~A~~~~~~~~~ 234 (244)
T TIGR00685 169 GEIVKRLLWHQPGS-GISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS----KKTVAKFHLTGPQQ 234 (244)
T ss_pred HHHHHHHHHhcccC-CCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC----cCCCceEeCCCHHH
Confidence 48899999999997 99999999999999999999 77788876431 12223677776554
No 212
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=95.02 E-value=0.036 Score=63.28 Aligned_cols=95 Identities=17% Similarity=0.100 Sum_probs=69.3
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCccccc--------------------ceEE-eCCcCCCC
Q 009774 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL--------------------SGFF-DTAVGNKR 460 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~f--------------------d~i~-~~~~~~KP 460 (526)
++.|++.+++++|++.|+++.++|+.+....+.+.+.+ |+.+.. +.++ +.....+=
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~l---GI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~ 518 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRL---GLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEV 518 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc---CCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEec
Confidence 68899999999999999999999999999999999999 885410 0000 00011222
Q ss_pred CHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcE
Q 009774 461 ETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEV 500 (526)
Q Consensus 461 ~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~ 500 (526)
.|+-=..+.+.+.-. .+.+.|+||..+|..+-++|.+-.
T Consensus 519 ~Pe~K~~iV~~lq~~-G~~VamvGDGvNDapAL~~AdVGI 557 (755)
T TIGR01647 519 FPEHKYEIVEILQKR-GHLVGMTGDGVNDAPALKKADVGI 557 (755)
T ss_pred CHHHHHHHHHHHHhc-CCEEEEEcCCcccHHHHHhCCeeE
Confidence 333334455555554 668999999999999999987753
No 213
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=95.00 E-value=0.031 Score=54.87 Aligned_cols=44 Identities=14% Similarity=0.194 Sum_probs=35.2
Q ss_pred CHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774 461 ETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 506 (526)
Q Consensus 461 ~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~ 506 (526)
+-....+++++++++ +++++.+|||.+|+..- ..+..+|.|.+.
T Consensus 166 K~~Al~~L~~~~~~~-~~~vl~aGDSgND~~mL-~~~~~~vvV~Na 209 (247)
T PF05116_consen 166 KGAALRYLMERWGIP-PEQVLVAGDSGNDLEML-EGGDHGVVVGNA 209 (247)
T ss_dssp HHHHHHHHHHHHT---GGGEEEEESSGGGHHHH-CCSSEEEE-TTS
T ss_pred HHHHHHHHHHHhCCC-HHHEEEEeCCCCcHHHH-cCcCCEEEEcCC
Confidence 457899999999997 99999999999999765 777888888654
No 214
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=94.85 E-value=0.2 Score=45.30 Aligned_cols=102 Identities=12% Similarity=0.127 Sum_probs=59.9
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHHHH---HHHHhhcCCCCcccccce--EEe--C------CcCCCCCHHHHHH-H
Q 009774 403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQ---RLIFGNSNYGDLRKYLSG--FFD--T------AVGNKRETPSYVE-I 468 (526)
Q Consensus 403 l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~---~~~l~~l~~~gl~~~fd~--i~~--~------~~~~KP~p~~~~~-~ 468 (526)
..||+.++.+.++++||++.-+|+.+.-.. +..|+...-.|. .+=+. ++. . ...-.++|+.|.. +
T Consensus 28 ~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~-~lP~Gpv~~sP~~l~~al~rEvi~~~p~~fK~~~ 106 (157)
T PF08235_consen 28 THPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGH-NLPDGPVLLSPDSLFSALHREVISKDPEEFKIAC 106 (157)
T ss_pred hhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCc-cCCCCCEEECCcchhhhhhccccccChHHHHHHH
Confidence 349999999999999999999999985543 333443311111 11111 111 0 1122456777766 3
Q ss_pred HHHc-CCCC-CCcEEE--EecCHhhHHHHHHcCCc--EEEEeC
Q 009774 469 TNSL-GVDK-PSEILF--VTDVYQEATAAKAAGLE--VVISIR 505 (526)
Q Consensus 469 ~~~l-~~~~-p~~~l~--VgDs~~Di~~A~~aG~~--~i~v~~ 505 (526)
|+.+ ..-+ ...-++ .|++.+|+.+-+++|+. .|++..
T Consensus 107 L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip~~rIF~I~ 149 (157)
T PF08235_consen 107 LRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIPKSRIFIIN 149 (157)
T ss_pred HHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCChhhEEEEC
Confidence 3444 2211 123333 57999999999999994 355543
No 215
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=94.76 E-value=0.047 Score=51.57 Aligned_cols=44 Identities=20% Similarity=0.220 Sum_probs=39.6
Q ss_pred CCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEE
Q 009774 457 GNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV 501 (526)
Q Consensus 457 ~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i 501 (526)
...+++..++.++++++++ ++++++|||+.+|+..++.+|+..+
T Consensus 160 ~~~~K~~~~~~~~~~~~~~-~~~~~~~GD~~nD~~~~~~~~~~va 203 (204)
T TIGR01484 160 AGVDKGSALQALLKELNGK-RDEILAFGDSGNDEEMFEVAGLAVA 203 (204)
T ss_pred CCCChHHHHHHHHHHhCCC-HHHEEEEcCCHHHHHHHHHcCCceE
Confidence 4577889999999999997 9999999999999999999998654
No 216
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=94.52 E-value=0.057 Score=51.03 Aligned_cols=12 Identities=25% Similarity=0.509 Sum_probs=9.4
Q ss_pred EEEecccccccc
Q 009774 287 IVLDIEGTTTPI 298 (526)
Q Consensus 287 VlFD~DGTL~d~ 298 (526)
|+||+||||++.
T Consensus 2 i~~D~DgTL~~~ 13 (204)
T TIGR01484 2 LFFDLDGTLLDP 13 (204)
T ss_pred EEEeCcCCCcCC
Confidence 678888888864
No 217
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=94.40 E-value=0.059 Score=62.68 Aligned_cols=93 Identities=18% Similarity=0.165 Sum_probs=68.7
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEe------------------CCcCCCCCHH
Q 009774 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFD------------------TAVGNKRETP 463 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~------------------~~~~~KP~p~ 463 (526)
++.|++.+++++|++.|+++.++|+-+......+.+.+ |+.. +.++. .....+=.|+
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~l---GI~~--~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe 624 (902)
T PRK10517 550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEV---GLDA--GEVLIGSDIETLSDDELANLAERTTLFARLTPM 624 (902)
T ss_pred cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc---CCCc--cCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHH
Confidence 67899999999999999999999999999999999999 8852 11110 0111222333
Q ss_pred HHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcE
Q 009774 464 SYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEV 500 (526)
Q Consensus 464 ~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~ 500 (526)
-=.++.+.+.-. .+-+.|+||..+|..+-++|.+-.
T Consensus 625 ~K~~IV~~Lq~~-G~vVam~GDGvNDaPALk~ADVGI 660 (902)
T PRK10517 625 HKERIVTLLKRE-GHVVGFMGDGINDAPALRAADIGI 660 (902)
T ss_pred HHHHHHHHHHHC-CCEEEEECCCcchHHHHHhCCEEE
Confidence 334455555544 567999999999999999987643
No 218
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=94.37 E-value=0.33 Score=43.10 Aligned_cols=96 Identities=14% Similarity=0.164 Sum_probs=62.0
Q ss_pred ccCCCHHHHHHHHHHC-C-CeEEEEeCchHH-------HHHHHHh-hcCCCCcccccceEEeCCcCCCC--CHHHHHHHH
Q 009774 402 EVFDDVPEALEKWHSL-G-TKVYIYSSGSRL-------AQRLIFG-NSNYGDLRKYLSGFFDTAVGNKR--ETPSYVEIT 469 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~-G-~~l~vvTn~~~~-------~~~~~l~-~l~~~gl~~~fd~i~~~~~~~KP--~p~~~~~~~ 469 (526)
..+|.-..-+++++.. | .-++++||+... .+...++ .. |+. ++ .....|| ..+.+.+..
T Consensus 61 ~Iwp~~l~~ie~~~~vygek~i~v~SNsaG~~~~D~d~s~Ak~le~k~---gIp-----Vl-RHs~kKP~ct~E~~~y~~ 131 (190)
T KOG2961|consen 61 AIWPPLLPSIERCKAVYGEKDIAVFSNSAGLTEYDHDDSKAKALEAKI---GIP-----VL-RHSVKKPACTAEEVEYHF 131 (190)
T ss_pred ccCchhHHHHHHHHHHhCcccEEEEecCcCccccCCchHHHHHHHHhh---CCc-----eE-eecccCCCccHHHHHHHh
Confidence 4667777777888764 3 669999997422 1111222 11 221 11 1122355 445566544
Q ss_pred HHcCCCCCCcEEEEecCH-hhHHHHHHcCCcEEEEeCC
Q 009774 470 NSLGVDKPSEILFVTDVY-QEATAAKAAGLEVVISIRP 506 (526)
Q Consensus 470 ~~l~~~~p~~~l~VgDs~-~Di~~A~~aG~~~i~v~~~ 506 (526)
..-.+..+++++||||++ .||.-|...|-.+||+.++
T Consensus 132 ~Nshv~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~g 169 (190)
T KOG2961|consen 132 GNSHVCTSSELIMVGDRLFTDIVYANRMGSLGVWTEPG 169 (190)
T ss_pred CCcccCChhHeEEEccchhhhHhhhhhccceeEEeccc
Confidence 433333399999999999 8999999999999999987
No 219
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=94.35 E-value=0.26 Score=46.60 Aligned_cols=94 Identities=16% Similarity=-0.019 Sum_probs=53.5
Q ss_pred CCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCccc----ccceEEeCCcCCCC-CHHHHHHHHHHcCCCCCCc
Q 009774 405 DDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK----YLSGFFDTAVGNKR-ETPSYVEITNSLGVDKPSE 479 (526)
Q Consensus 405 pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~----~fd~i~~~~~~~KP-~p~~~~~~~~~l~~~~p~~ 479 (526)
|--...|..+++ |...|++-+........-.++...|+.- .|-.+.+... +|- ..+..+..-++++.. .-
T Consensus 137 pre~aaLa~~rE--yseti~~rs~d~~~~~~~~~L~e~glt~v~garf~~v~~as~-gKg~Aa~~ll~~y~rl~~~--r~ 211 (274)
T COG3769 137 PREQAALAMLRE--YSETIIWRSSDERMAQFTARLNERGLTFVHGARFWHVLDASA-GKGQAANWLLETYRRLGGA--RT 211 (274)
T ss_pred ChHHhHHHHHHH--hhhheeecccchHHHHHHHHHHhcCceEEeccceEEEecccc-CccHHHHHHHHHHHhcCce--eE
Confidence 334445555555 6778888777664444444443336652 2223333322 232 233444444555553 24
Q ss_pred EEEEecCHhhHHHHHHcCCcEEEEe
Q 009774 480 ILFVTDVYQEATAAKAAGLEVVISI 504 (526)
Q Consensus 480 ~l~VgDs~~Di~~A~~aG~~~i~v~ 504 (526)
++-+||+++|+ .-...++.++.|.
T Consensus 212 t~~~GDg~nD~-Pl~ev~d~AfiV~ 235 (274)
T COG3769 212 TLGLGDGPNDA-PLLEVMDYAFIVK 235 (274)
T ss_pred EEecCCCCCcc-cHHHhhhhheeec
Confidence 89999999998 5667788777765
No 220
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=94.32 E-value=0.069 Score=61.96 Aligned_cols=94 Identities=14% Similarity=0.151 Sum_probs=68.2
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEe-----------------C-CcCCCCCHH
Q 009774 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFD-----------------T-AVGNKRETP 463 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~-----------------~-~~~~KP~p~ 463 (526)
++.|++.+.+++|++.|+++.++|+.+......+.+.+ |+.. +.++. . ....+=.|+
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~l---GI~~--~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe 589 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEV---GIDA--NDFLLGADIEELSDEELARELRKYHIFARLTPM 589 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc---CCCC--CCeeecHhhhhCCHHHHHHHhhhCeEEEECCHH
Confidence 68899999999999999999999999999999999999 8852 11110 0 111112233
Q ss_pred HHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEE
Q 009774 464 SYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV 501 (526)
Q Consensus 464 ~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i 501 (526)
-=.++.+.+.-. .+.+.|+||..+|..+-++|.+-..
T Consensus 590 ~K~~iV~~lq~~-G~vVam~GDGvNDapALk~AdVGIA 626 (867)
T TIGR01524 590 QKSRIIGLLKKA-GHTVGFLGDGINDAPALRKADVGIS 626 (867)
T ss_pred HHHHHHHHHHhC-CCEEEEECCCcccHHHHHhCCEEEE
Confidence 333444444443 5679999999999999999987644
No 221
>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=94.20 E-value=0.13 Score=53.40 Aligned_cols=98 Identities=12% Similarity=0.102 Sum_probs=79.5
Q ss_pred ccCCC--HHHHHHHHHHCCCeEEEEeCc--hHHHHHHHHhhcCCCCcccccceEE-e-CCcCCCCCHHHHHHHHHHcCCC
Q 009774 402 EVFDD--VPEALEKWHSLGTKVYIYSSG--SRLAQRLIFGNSNYGDLRKYLSGFF-D-TAVGNKRETPSYVEITNSLGVD 475 (526)
Q Consensus 402 ~l~pg--v~~~L~~L~~~G~~l~vvTn~--~~~~~~~~l~~l~~~gl~~~fd~i~-~-~~~~~KP~p~~~~~~~~~l~~~ 475 (526)
.|||. ..++.+.+.+.|.++.++|.. |.+..+..+..+ |..-+=-.++ + .....|-.-..|..+++.-+++
T Consensus 97 vLypn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s~---g~d~~nipiY~S~e~rl~KnSg~LFk~Vlk~EnVd 173 (635)
T COG5610 97 VLYPNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNSF---GPDFNNIPIYMSSEFRLKKNSGNLFKAVLKLENVD 173 (635)
T ss_pred EeeccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHhc---CCCccCceeeecceeehhcccchHHHHHHhhcCCC
Confidence 56664 478999999999999999998 677788888887 6543222234 3 3455688889999999999998
Q ss_pred CCCcEEEEecCH-hhHHHHHHcCCcEEEE
Q 009774 476 KPSEILFVTDVY-QEATAAKAAGLEVVIS 503 (526)
Q Consensus 476 ~p~~~l~VgDs~-~Di~~A~~aG~~~i~v 503 (526)
|...++|||+. .|+..+++.|+.|...
T Consensus 174 -~~~w~H~GDN~~aD~l~pk~LgI~Tlf~ 201 (635)
T COG5610 174 -PKKWIHCGDNWVADYLKPKNLGISTLFY 201 (635)
T ss_pred -hhheEEecCchhhhhcCccccchhHHHH
Confidence 99999999998 7999999999988765
No 222
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=93.95 E-value=0.081 Score=61.58 Aligned_cols=92 Identities=14% Similarity=0.148 Sum_probs=68.9
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE------------------eCCcCCCCCHH
Q 009774 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF------------------DTAVGNKRETP 463 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~------------------~~~~~~KP~p~ 463 (526)
++.|++.+++++|++.|+++.++|+-+......+.+.+ |+.. +.++ ......+=.|+
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~l---GI~~--~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe 624 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREV---GLEP--GEPLLGTEIEAMDDAALAREVEERTVFAKLTPL 624 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc---CCCC--CCccchHhhhhCCHHHHHHHhhhCCEEEEeCHH
Confidence 68899999999999999999999999999999999999 8852 1111 00111222344
Q ss_pred HHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCc
Q 009774 464 SYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLE 499 (526)
Q Consensus 464 ~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~ 499 (526)
-=.++.+.+.-. .+-+.|+||..+|..+=++|-+-
T Consensus 625 ~K~~iV~~Lq~~-G~vVamtGDGvNDaPALk~ADVG 659 (903)
T PRK15122 625 QKSRVLKALQAN-GHTVGFLGDGINDAPALRDADVG 659 (903)
T ss_pred HHHHHHHHHHhC-CCEEEEECCCchhHHHHHhCCEE
Confidence 444555555554 66799999999999999998775
No 223
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=93.88 E-value=0.066 Score=51.98 Aligned_cols=48 Identities=17% Similarity=0.138 Sum_probs=41.2
Q ss_pred eCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEE
Q 009774 453 DTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV 501 (526)
Q Consensus 453 ~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i 501 (526)
+.....++++...+.+++++|++ +++|++|||+.+|+...+.+|....
T Consensus 152 ei~~~~~~K~~al~~l~~~~g~~-~~~~i~~GD~~nD~~ml~~~~~~ia 199 (236)
T TIGR02471 152 DVLPLRASKGLALRYLSYRWGLP-LEQILVAGDSGNDEEMLRGLTLGVV 199 (236)
T ss_pred EEeeCCCChHHHHHHHHHHhCCC-HHHEEEEcCCccHHHHHcCCCcEEE
Confidence 33456678889999999999997 9999999999999999999886554
No 224
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=93.83 E-value=0.11 Score=61.07 Aligned_cols=95 Identities=15% Similarity=0.053 Sum_probs=67.9
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE-----------------e-CCcCCCCCHH
Q 009774 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF-----------------D-TAVGNKRETP 463 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~-----------------~-~~~~~KP~p~ 463 (526)
++.|++.+++++|++.|+++.++|+-+...+..+.+.+ |+.+.=..++ . .....+=.|+
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~---GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe 655 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNC---GILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPL 655 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHc---CCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHH
Confidence 68899999999999999999999999999999999999 7752111111 0 0111122233
Q ss_pred HHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcE
Q 009774 464 SYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEV 500 (526)
Q Consensus 464 ~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~ 500 (526)
-=..+.+.+.-. .+.+.|+||..+|..+=++|-+-.
T Consensus 656 ~K~~iV~~lq~~-g~vVam~GDGvNDapALk~AdVGI 691 (941)
T TIGR01517 656 DKQLLVLMLKDM-GEVVAVTGDGTNDAPALKLADVGF 691 (941)
T ss_pred HHHHHHHHHHHC-CCEEEEECCCCchHHHHHhCCcce
Confidence 334444455444 567999999999999999987644
No 225
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=93.73 E-value=0.18 Score=56.65 Aligned_cols=83 Identities=19% Similarity=0.251 Sum_probs=64.5
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeC-CcCCCCCHHHHHHHHHHcCCCCCCcE
Q 009774 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDT-AVGNKRETPSYVEITNSLGVDKPSEI 480 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~-~~~~KP~p~~~~~~~~~l~~~~p~~~ 480 (526)
++.||+..++..||+.|++++++|+.+...++...+.+ | ++.++.+ .+..| ....+++.-. ...+
T Consensus 723 ~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~V---G----i~~V~aev~P~~K------~~~Ik~lq~~-~~~V 788 (951)
T KOG0207|consen 723 QVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQV---G----IDNVYAEVLPEQK------AEKIKEIQKN-GGPV 788 (951)
T ss_pred ccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhh---C----cceEEeccCchhh------HHHHHHHHhc-CCcE
Confidence 67899999999999999999999999999999999999 7 5666633 22222 2344455554 5689
Q ss_pred EEEecCHhhHHHHHHcCC
Q 009774 481 LFVTDVYQEATAAKAAGL 498 (526)
Q Consensus 481 l~VgDs~~Di~~A~~aG~ 498 (526)
.||||..+|--+-..|.+
T Consensus 789 aMVGDGINDaPALA~AdV 806 (951)
T KOG0207|consen 789 AMVGDGINDAPALAQADV 806 (951)
T ss_pred EEEeCCCCccHHHHhhcc
Confidence 999999999866665544
No 226
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=93.59 E-value=0.15 Score=60.35 Aligned_cols=96 Identities=14% Similarity=0.103 Sum_probs=69.7
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCccccc---------c-eEEe--C---------------
Q 009774 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL---------S-GFFD--T--------------- 454 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~f---------d-~i~~--~--------------- 454 (526)
++.|++.++++.|++.|+++.++|+.+......+.+.+ |+.+.. + .+++ +
T Consensus 646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~---Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~ 722 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEV---GIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKAL 722 (1053)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHc---CCCCccccccccccccceeeehHHhhhcCHHHHHHHhhc
Confidence 68899999999999999999999999999999999999 774310 1 1110 0
Q ss_pred -CcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEE
Q 009774 455 -AVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV 501 (526)
Q Consensus 455 -~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i 501 (526)
....+=.|+-=..+.+.+.-. .+.+.|+||..+|..+-+.|.+-..
T Consensus 723 ~~V~ar~sP~~K~~iV~~lq~~-g~~Vam~GDGvNDapaLk~AdVGIA 769 (1053)
T TIGR01523 723 CLVIARCAPQTKVKMIEALHRR-KAFCAMTGDGVNDSPSLKMANVGIA 769 (1053)
T ss_pred CeEEEecCHHHHHHHHHHHHhc-CCeeEEeCCCcchHHHHHhCCccEe
Confidence 011222333334455555554 5679999999999999999987544
No 227
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=93.56 E-value=0.14 Score=50.80 Aligned_cols=39 Identities=13% Similarity=0.017 Sum_probs=28.6
Q ss_pred HHHHHHHcCCCCCCcEEEEecCHhhHHHHHHc---CCcEEEEe
Q 009774 465 YVEITNSLGVDKPSEILFVTDVYQEATAAKAA---GLEVVISI 504 (526)
Q Consensus 465 ~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~a---G~~~i~v~ 504 (526)
..++++.+++. .+++++|||+.+|+.+-+.+ |..+|.+.
T Consensus 179 l~~ll~~~~~~-~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg 220 (266)
T PRK10187 179 IAAFMQEAPFA-GRTPVFVGDDLTDEAGFAVVNRLGGISVKVG 220 (266)
T ss_pred HHHHHHhcCCC-CCeEEEEcCCccHHHHHHHHHhcCCeEEEEC
Confidence 34456666776 78999999999998887777 44556553
No 228
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=92.92 E-value=0.41 Score=52.03 Aligned_cols=82 Identities=17% Similarity=0.251 Sum_probs=65.1
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEE
Q 009774 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL 481 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l 481 (526)
++.|++.++++.|++.|+++.++|..+......+-+.+ |+ + ..=.|+--..+.+.+.-. ...+.
T Consensus 347 ~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~l---gi-------~-----~~~~p~~K~~~v~~l~~~-g~~v~ 410 (499)
T TIGR01494 347 PLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKEL---GI-------F-----ARVTPEEKAALVEALQKK-GRVVA 410 (499)
T ss_pred CCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc---Cc-------e-----eccCHHHHHHHHHHHHHC-CCEEE
Confidence 68899999999999999999999999999999999988 65 1 112333334555555443 56899
Q ss_pred EEecCHhhHHHHHHcCCc
Q 009774 482 FVTDVYQEATAAKAAGLE 499 (526)
Q Consensus 482 ~VgDs~~Di~~A~~aG~~ 499 (526)
||||..+|..+-+.+++-
T Consensus 411 ~vGDg~nD~~al~~Advg 428 (499)
T TIGR01494 411 MTGDGVNDAPALKKADVG 428 (499)
T ss_pred EECCChhhHHHHHhCCCc
Confidence 999999999998888754
No 229
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=92.02 E-value=0.2 Score=59.05 Aligned_cols=96 Identities=17% Similarity=0.141 Sum_probs=69.0
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCccccc------------------------ceEEe--C-
Q 009774 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL------------------------SGFFD--T- 454 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~f------------------------d~i~~--~- 454 (526)
+|.|++.+.+++|+++|+++.++|+.+......+.+.+ |+.+-- ..+++ +
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~---gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l 644 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGV---GIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDL 644 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc---CCCCCCccchhhhhhhccccccccccccccceEEEhHHh
Confidence 67899999999999999999999999999999999988 663210 01111 0
Q ss_pred -----------------CcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEE
Q 009774 455 -----------------AVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV 501 (526)
Q Consensus 455 -----------------~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i 501 (526)
....+-.|+-=..+.+.+.-. ..-+.|+||+.+|+.+-++|.+-..
T Consensus 645 ~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~-g~vv~~~GDG~ND~paLk~AdVGia 707 (997)
T TIGR01106 645 KDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQ-GAIVAVTGDGVNDSPALKKADIGVA 707 (997)
T ss_pred hhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHC-CCEEEEECCCcccHHHHhhCCccee
Confidence 012233444444455555544 5679999999999999998887543
No 230
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=91.48 E-value=0.52 Score=49.56 Aligned_cols=85 Identities=11% Similarity=0.158 Sum_probs=69.8
Q ss_pred CCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--e----CCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774 405 DDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--D----TAVGNKRETPSYVEITNSLGVDKPS 478 (526)
Q Consensus 405 pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~----~~~~~KP~p~~~~~~~~~l~~~~p~ 478 (526)
-...+.+..|+++|+-++|+|-++...++..++..+ |.++ + ....+-|+.+-.+++++++++- -+
T Consensus 258 k~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~khp--------~MiLkeedfa~~~iNW~~K~eNirkIAkklNlg-~d 328 (574)
T COG3882 258 KTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFRKHP--------DMILKEEDFAVFQINWDPKAENIRKIAKKLNLG-LD 328 (574)
T ss_pred HHHHHHHHHHHhccEEEEEecCCchhhHHHHHhhCC--------CeEeeHhhhhhheecCCcchhhHHHHHHHhCCC-cc
Confidence 334478999999999999999999888887777762 3344 1 2456899999999999999997 99
Q ss_pred cEEEEecCHhhHHHHHHcCC
Q 009774 479 EILFVTDVYQEATAAKAAGL 498 (526)
Q Consensus 479 ~~l~VgDs~~Di~~A~~aG~ 498 (526)
..+||+|++...+--++-+=
T Consensus 329 SmvFiDD~p~ErE~vk~~~~ 348 (574)
T COG3882 329 SMVFIDDNPAERELVKRELP 348 (574)
T ss_pred ceEEecCCHHHHHHHHhcCc
Confidence 99999999988877777764
No 231
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=89.97 E-value=0.43 Score=46.21 Aligned_cols=25 Identities=8% Similarity=-0.061 Sum_probs=18.6
Q ss_pred HHCCCeEEEEeCchHHHHHHHHhhc
Q 009774 415 HSLGTKVYIYSSGSRLAQRLIFGNS 439 (526)
Q Consensus 415 ~~~G~~l~vvTn~~~~~~~~~l~~l 439 (526)
+++|++++++|+.+...+..+++.+
T Consensus 27 ~~~gi~~viaTGR~~~~v~~~~~~l 51 (236)
T TIGR02471 27 SGDAVGFGIATGRSVESAKSRYAKL 51 (236)
T ss_pred cCCCceEEEEeCCCHHHHHHHHHhC
Confidence 5567777777777777777777766
No 232
>PLN03017 trehalose-phosphatase
Probab=89.48 E-value=0.59 Score=48.28 Aligned_cols=18 Identities=17% Similarity=0.122 Sum_probs=13.7
Q ss_pred cEEEEecCHhhHHHHHHc
Q 009774 479 EILFVTDVYQEATAAKAA 496 (526)
Q Consensus 479 ~~l~VgDs~~Di~~A~~a 496 (526)
-.+||||...|-.+-+.+
T Consensus 304 ~pvyiGDD~TDEDaF~~L 321 (366)
T PLN03017 304 FPVYIGDDRTDEDAFKML 321 (366)
T ss_pred eEEEeCCCCccHHHHHHH
Confidence 379999999877666655
No 233
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=89.47 E-value=1.3 Score=51.82 Aligned_cols=100 Identities=19% Similarity=0.182 Sum_probs=73.1
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccc--eEEe-CC-----------------cCCCC
Q 009774 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLS--GFFD-TA-----------------VGNKR 460 (526)
Q Consensus 401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd--~i~~-~~-----------------~~~KP 460 (526)
.+|.|++.++++.|++.|+++.++|+-+...+..+.+.+ |+...-+ .+++ .. ...+=
T Consensus 546 Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~---Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARv 622 (917)
T COG0474 546 DPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKEC---GIEAEAESALVIDGAELDALSDEELAELVEELSVFARV 622 (917)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHc---CCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEc
Confidence 378999999999999999999999999999999999999 7664432 1321 11 11223
Q ss_pred CHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEEEe
Q 009774 461 ETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISI 504 (526)
Q Consensus 461 ~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~ 504 (526)
.|+.=.++.+.+.=. ..-+.|+||..||+-+=++|-+-.....
T Consensus 623 sP~qK~~IV~~lq~~-g~vVamtGDGvNDapALk~ADVGIamg~ 665 (917)
T COG0474 623 SPEQKARIVEALQKS-GHVVAMTGDGVNDAPALKAADVGIAMGG 665 (917)
T ss_pred CHHHHHHHHHHHHhC-CCEEEEeCCCchhHHHHHhcCccEEecc
Confidence 344334444555544 5679999999999999999987664443
No 234
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=89.02 E-value=0.73 Score=45.22 Aligned_cols=102 Identities=13% Similarity=0.104 Sum_probs=64.4
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCch---HHHHHHHHhhcCCCCcccccceEEeCC-------cCCCCC-------HHH
Q 009774 402 EVFDDVPEALEKWHSLGTKVYIYSSGS---RLAQRLIFGNSNYGDLRKYLSGFFDTA-------VGNKRE-------TPS 464 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~---~~~~~~~l~~l~~~gl~~~fd~i~~~~-------~~~KP~-------p~~ 464 (526)
.++|++.++|++|+++|++++++||++ .......++.+ |+....+.++.+. ...++. .+.
T Consensus 17 ~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~---g~~~~~~~iit~~~~~~~~l~~~~~~~~v~~lg~~~ 93 (249)
T TIGR01457 17 ERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASF---DIPATLETVFTASMATADYMNDLKLEKTVYVIGEEG 93 (249)
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHc---CCCCChhhEeeHHHHHHHHHHhcCCCCEEEEEcChh
Confidence 477999999999999999999999944 55666778888 8876667777220 011121 123
Q ss_pred HHHHHHHcCCC---CCCcEEEEecC----HhhHHHH---HHcCCcEEEEeCC
Q 009774 465 YVEITNSLGVD---KPSEILFVTDV----YQEATAA---KAAGLEVVISIRP 506 (526)
Q Consensus 465 ~~~~~~~l~~~---~p~~~l~VgDs----~~Di~~A---~~aG~~~i~v~~~ 506 (526)
+...++..|+. ...+.|+||.. +.++..| .+.|+..+..+..
T Consensus 94 l~~~l~~~g~~~~~~~~~~Vvvg~~~~~~y~~l~~a~~~l~~g~~~i~tN~D 145 (249)
T TIGR01457 94 LKEAIKEAGYVEDKEKPDYVVVGLDRQIDYEKFATATLAIRKGAHFIGTNGD 145 (249)
T ss_pred HHHHHHHcCCEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCeEEEECCC
Confidence 55666776743 12356777743 2344333 2558885555543
No 235
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=88.99 E-value=1.2 Score=43.25 Aligned_cols=85 Identities=8% Similarity=0.095 Sum_probs=50.9
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHH---HHHhh-cCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQR---LIFGN-SNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKP 477 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~---~~l~~-l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p 477 (526)
.++|++.+.|+.|+++|+++.++||++..... ..+.. + |+.-..+.++.+ . ......+++.. . .
T Consensus 14 ~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~---g~~~~~~~iits------~-~~~~~~l~~~~-~-~ 81 (236)
T TIGR01460 14 KPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLL---GVDVSPDQIITS------G-SVTKDLLRQRF-E-G 81 (236)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhc---CCCCCHHHeeeH------H-HHHHHHHHHhC-C-C
Confidence 47899999999999999999999988733222 33333 5 665445555521 1 11222222221 2 3
Q ss_pred CcEEEEecCHhhHHHHHHcCCc
Q 009774 478 SEILFVTDVYQEATAAKAAGLE 499 (526)
Q Consensus 478 ~~~l~VgDs~~Di~~A~~aG~~ 499 (526)
..++++|. ....+..+..|+.
T Consensus 82 ~~v~v~G~-~~~~~~l~~~g~~ 102 (236)
T TIGR01460 82 EKVYVIGV-GELRESLEGLGFR 102 (236)
T ss_pred CEEEEECC-HHHHHHHHHcCCc
Confidence 46777775 3444555666754
No 236
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=88.47 E-value=24 Score=33.83 Aligned_cols=38 Identities=8% Similarity=-0.024 Sum_probs=31.9
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhc
Q 009774 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNS 439 (526)
Q Consensus 401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l 439 (526)
.++.||+.++++.|.++ ++-+|+|.+-.++.++..+.+
T Consensus 82 a~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~i 119 (315)
T COG4030 82 AKLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMI 119 (315)
T ss_pred cccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhc
Confidence 46899999999999987 677788888888888887777
No 237
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=88.37 E-value=0.72 Score=45.54 Aligned_cols=44 Identities=18% Similarity=0.376 Sum_probs=38.3
Q ss_pred CCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcEEE
Q 009774 458 NKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVI 502 (526)
Q Consensus 458 ~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~ 502 (526)
.-.+......+++.+|++ +++++.|||+.+|+..-+.+|...+.
T Consensus 194 gvsKg~al~~l~~~~gi~-~~~v~afGD~~NDi~Ml~~ag~~vAm 237 (270)
T PRK10513 194 RVNKGTGVKSLAEHLGIK-PEEVMAIGDQENDIAMIEYAGVGVAM 237 (270)
T ss_pred CCChHHHHHHHHHHhCCC-HHHEEEECCchhhHHHHHhCCceEEe
Confidence 344467899999999997 99999999999999999999985554
No 238
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=88.20 E-value=0.52 Score=46.49 Aligned_cols=48 Identities=10% Similarity=0.059 Sum_probs=37.3
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHH---HHHHHhhcCCCCcccccceEE
Q 009774 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLA---QRLIFGNSNYGDLRKYLSGFF 452 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~---~~~~l~~l~~~gl~~~fd~i~ 452 (526)
.++|++.++|++|+++|++++++||++... ....++.+ |+.--.+.++
T Consensus 21 ~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~---g~~~~~~~i~ 71 (257)
T TIGR01458 21 VAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRL---GFDISEDEVF 71 (257)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHc---CCCCCHHHeE
Confidence 388999999999999999999999976553 45566666 7654445555
No 239
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=88.19 E-value=1.7 Score=41.91 Aligned_cols=83 Identities=16% Similarity=0.087 Sum_probs=63.7
Q ss_pred CCeEEEEeCchHHHHHHHHhhcCCCCcccccc--eEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHH
Q 009774 418 GTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLS--GFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKA 495 (526)
Q Consensus 418 G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd--~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~ 495 (526)
++-=++||++.--..-.++=-+ +|.++|. .|++....+| ...|+++.+++|-. ...-++|||....-.+|+.
T Consensus 175 ~~vNvLVTs~qLVPaLaKcLLy---~L~~~f~ieNIYSa~kvGK--~~cFe~I~~Rfg~p-~~~f~~IGDG~eEe~aAk~ 248 (274)
T TIGR01658 175 NCINVLVTSGQLIPSLAKCLLF---RLDTIFRIENVYSSIKVGK--LQCFKWIKERFGHP-KVRFCAIGDGWEECTAAQA 248 (274)
T ss_pred ceeEEEEEcCccHHHHHHHHHh---ccCCccccccccchhhcch--HHHHHHHHHHhCCC-CceEEEeCCChhHHHHHHh
Confidence 3456788888766655555555 6666665 3555555556 58899999999995 8899999999999999999
Q ss_pred cCCcEEEEeCC
Q 009774 496 AGLEVVISIRP 506 (526)
Q Consensus 496 aG~~~i~v~~~ 506 (526)
.++.++-+...
T Consensus 249 l~wPFw~I~~h 259 (274)
T TIGR01658 249 MNWPFVKIDLH 259 (274)
T ss_pred cCCCeEEeecC
Confidence 99999988754
No 240
>PLN02580 trehalose-phosphatase
Probab=88.19 E-value=0.8 Score=47.71 Aligned_cols=35 Identities=20% Similarity=0.096 Sum_probs=27.9
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhh
Q 009774 403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGN 438 (526)
Q Consensus 403 l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~ 438 (526)
+-|++.++|+.|.+. .+++|||+.+.+.++..+.-
T Consensus 142 ~s~~~~~aL~~La~~-~~VAIVSGR~~~~L~~~l~~ 176 (384)
T PLN02580 142 MSDAMRSAVKNVAKY-FPTAIISGRSRDKVYELVGL 176 (384)
T ss_pred CCHHHHHHHHHHhhC-CCEEEEeCCCHHHHHHHhCC
Confidence 457788888888887 58999999998888777653
No 241
>PRK10976 putative hydrolase; Provisional
Probab=87.95 E-value=0.54 Score=46.36 Aligned_cols=15 Identities=20% Similarity=0.313 Sum_probs=9.0
Q ss_pred ceEEEEecccccccc
Q 009774 284 PRCIVLDIEGTTTPI 298 (526)
Q Consensus 284 ikaVlFD~DGTL~d~ 298 (526)
+|.|+|||||||++.
T Consensus 2 ikli~~DlDGTLl~~ 16 (266)
T PRK10976 2 YQVVASDLDGTLLSP 16 (266)
T ss_pred ceEEEEeCCCCCcCC
Confidence 566666666666654
No 242
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=87.58 E-value=2.9 Score=40.68 Aligned_cols=92 Identities=13% Similarity=0.129 Sum_probs=53.0
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcc-cccceEE-----eCC----cCCCCCHHHHHH--
Q 009774 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLR-KYLSGFF-----DTA----VGNKRETPSYVE-- 467 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~-~~fd~i~-----~~~----~~~KP~p~~~~~-- 467 (526)
.+.+.+|+.++++.|+++++|+.|+|.+-.+.+...+++. +.. +-+..+- ++. +..-|---.|.+
T Consensus 88 ~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~---~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~ 164 (246)
T PF05822_consen 88 DIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQA---GVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNE 164 (246)
T ss_dssp ---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHT---T--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHH
T ss_pred chhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHc---CCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCc
Confidence 4579999999999999999999999999999999999887 432 2211111 211 111121111222
Q ss_pred -HH------HHcCCCCCCcEEEEecCHhhHHHHHHc
Q 009774 468 -IT------NSLGVDKPSEILFVTDVYQEATAAKAA 496 (526)
Q Consensus 468 -~~------~~l~~~~p~~~l~VgDs~~Di~~A~~a 496 (526)
++ +. +..-.+++..|||..|+..|..+
T Consensus 165 ~~l~~~~~~~~--~~~R~NvlLlGDslgD~~Ma~G~ 198 (246)
T PF05822_consen 165 SALEDSPYFKQ--LKKRTNVLLLGDSLGDLHMADGV 198 (246)
T ss_dssp HHHTTHHHHHC--TTT--EEEEEESSSGGGGTTTT-
T ss_pred ccccCchHHHH--hccCCcEEEecCccCChHhhcCC
Confidence 11 22 22256899999999999988766
No 243
>PLN02151 trehalose-phosphatase
Probab=87.56 E-value=0.91 Score=46.72 Aligned_cols=14 Identities=43% Similarity=0.757 Sum_probs=11.9
Q ss_pred eEEEEecccccccc
Q 009774 285 RCIVLDIEGTTTPI 298 (526)
Q Consensus 285 kaVlFD~DGTL~d~ 298 (526)
.+++||+||||++.
T Consensus 99 ~ll~lDyDGTL~PI 112 (354)
T PLN02151 99 IVMFLDYDGTLSPI 112 (354)
T ss_pred eEEEEecCccCCCC
Confidence 58899999999863
No 244
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=87.49 E-value=0.85 Score=47.01 Aligned_cols=102 Identities=15% Similarity=0.138 Sum_probs=76.8
Q ss_pred CCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE-eC----------------------------
Q 009774 404 FDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF-DT---------------------------- 454 (526)
Q Consensus 404 ~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~-~~---------------------------- 454 (526)
.+-.+..|..+|+.|.++.++||+.-.+....+..+-..++..+||.++ ..
T Consensus 200 d~~~v~~l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~ff~e~~vlreV~t~~g~l~~g~~~ 279 (424)
T KOG2469|consen 200 DGTIVPLLSMLRDSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAKPGFFHEGTVLREVEPQEGLLKNGDNT 279 (424)
T ss_pred cCccccchHHHHhhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEeccCCccccccceeeeeccccccccccccC
Confidence 3445559999999999999999999888887777663337888888776 21
Q ss_pred ---CcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCH-hhHH-HHHHcCCcEEEEeCC
Q 009774 455 ---AVGNKRETPSYVEITNSLGVDKPSEILFVTDVY-QEAT-AAKAAGLEVVISIRP 506 (526)
Q Consensus 455 ---~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~-~Di~-~A~~aG~~~i~v~~~ 506 (526)
..+.++.+..-..+++.+++. ..+++||||+. .||- .-+.-|.+++++...
T Consensus 280 ~p~e~~~~ySggs~~~~~~~l~~~-g~diLy~gdHi~~dvl~skk~~~wrt~lv~pe 335 (424)
T KOG2469|consen 280 GPLEQGGVYSGGSLKTVETSMKVK-GKDILYGGDHIWGDVLVSKKRRGWRTVLVAPE 335 (424)
T ss_pred CcchhcccCCcchHHHHHHHhccc-ccceeecccceeeeEEecceecceEEEEEehh
Confidence 012244556778899999997 99999999998 5654 445668888888764
No 245
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=87.30 E-value=3 Score=44.71 Aligned_cols=28 Identities=14% Similarity=0.082 Sum_probs=24.7
Q ss_pred HHHHHHHCCCeEEEEeCchHHHHHHHHhh
Q 009774 410 ALEKWHSLGTKVYIYSSGSRLAQRLIFGN 438 (526)
Q Consensus 410 ~L~~L~~~G~~l~vvTn~~~~~~~~~l~~ 438 (526)
.++..+..| +++|+|.+++..++..++.
T Consensus 101 ~~~~~~~~g-~~vVVTAsPrvmVEpFake 128 (498)
T PLN02499 101 AWKVFSSCD-KRVVVTRMPRVMVERFAKE 128 (498)
T ss_pred HHHHHHcCC-eEEEEeCCHHHHHHHHHHH
Confidence 566667788 9999999999999999998
No 246
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=87.10 E-value=1.7 Score=42.66 Aligned_cols=13 Identities=31% Similarity=0.411 Sum_probs=8.9
Q ss_pred EEEeccccccccc
Q 009774 287 IVLDIEGTTTPIS 299 (526)
Q Consensus 287 VlFD~DGTL~d~~ 299 (526)
|+|||||||++..
T Consensus 2 i~~DlDGTll~~~ 14 (256)
T TIGR01486 2 IFTDLDGTLLDPH 14 (256)
T ss_pred EEEcCCCCCcCCC
Confidence 6677777777654
No 247
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=87.03 E-value=3.2 Score=49.54 Aligned_cols=41 Identities=7% Similarity=0.134 Sum_probs=38.2
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcc
Q 009774 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLR 445 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~ 445 (526)
++.|++.++++.|++.|+++.++|+.+...+..+.+.+ |+.
T Consensus 656 ~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~---gii 696 (1054)
T TIGR01657 656 PLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVAREC---GIV 696 (1054)
T ss_pred CCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc---CCC
Confidence 68899999999999999999999999999999999988 774
No 248
>PRK10444 UMP phosphatase; Provisional
Probab=86.74 E-value=0.56 Score=46.04 Aligned_cols=105 Identities=10% Similarity=0.086 Sum_probs=59.9
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCC------cCCCC-------CHHHHHHH
Q 009774 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTA------VGNKR-------ETPSYVEI 468 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~------~~~KP-------~p~~~~~~ 468 (526)
.++|++.++|++|+++|.++.++||++........+++...|+.---+.++.+. ...++ -...+...
T Consensus 17 ~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~~i~ts~~~~~~~L~~~~~~~v~~~g~~~l~~~ 96 (248)
T PRK10444 17 VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTSAMATADFLRRQEGKKAYVIGEGALIHE 96 (248)
T ss_pred eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHhhEecHHHHHHHHHHhCCCCEEEEEcCHHHHHH
Confidence 488999999999999999999999998754444444332227643344555210 00011 11223444
Q ss_pred HHHcCCC---CCCcEEEEecCHh----hHHHHH---HcCCcEEEEeCC
Q 009774 469 TNSLGVD---KPSEILFVTDVYQ----EATAAK---AAGLEVVISIRP 506 (526)
Q Consensus 469 ~~~l~~~---~p~~~l~VgDs~~----Di~~A~---~aG~~~i~v~~~ 506 (526)
++..|+. +..++++||...+ .+..|. +.|...+..+..
T Consensus 97 l~~~g~~~~~~~~~~Vvvg~~~~~~~~~l~~a~~~l~~g~~~i~~n~D 144 (248)
T PRK10444 97 LYKAGFTITDINPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPD 144 (248)
T ss_pred HHHCcCEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 5554542 1336788886542 222232 447777766543
No 249
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=86.51 E-value=1.9 Score=43.17 Aligned_cols=86 Identities=12% Similarity=0.094 Sum_probs=51.4
Q ss_pred cCCCHHHHHHHHHHC----CCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE--eCC-cCCCCCHHHHHHHHHHcCCC
Q 009774 403 VFDDVPEALEKWHSL----GTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTA-VGNKRETPSYVEITNSLGVD 475 (526)
Q Consensus 403 l~pgv~~~L~~L~~~----G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~--~~~-~~~KP~p~~~~~~~~~l~~~ 475 (526)
+.|++.+.|+.|.+. .++..++||+.--......+.+ +...+.-+ +++ ...-| |+... + ..
T Consensus 52 ~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg~~E~~rA~~l-----S~~Lgv~Vs~dqviqSHsP----~r~l~-~--~~ 119 (389)
T KOG1618|consen 52 PIPGALKALRRLVDNQGQLKIPFVFLTNGGGILESSRAQEL-----SALLGVEVSADQVIQSHSP----FRLLV-E--YH 119 (389)
T ss_pred CCcchHHHHHHHHhcCCCeeccEEEEeCCCCcchhhHHHHH-----HHhhCCccCHHHHHhhcCh----HHHHh-h--hh
Confidence 557788888888877 7999999999644333333322 22222222 221 12222 44443 3 33
Q ss_pred CCCcEEEEecCHhhHHHHHHcCCcEEE
Q 009774 476 KPSEILFVTDVYQEATAAKAAGLEVVI 502 (526)
Q Consensus 476 ~p~~~l~VgDs~~Di~~A~~aG~~~i~ 502 (526)
-++++.+|+. +-.+.|...|.+.|.
T Consensus 120 -~k~vLv~G~~-~vr~vAegyGFk~Vv 144 (389)
T KOG1618|consen 120 -YKRVLVVGQG-SVREVAEGYGFKNVV 144 (389)
T ss_pred -hceEEEecCC-cHHHHhhccCcccee
Confidence 5599999964 445678889997664
No 250
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=86.36 E-value=1.1 Score=50.99 Aligned_cols=24 Identities=13% Similarity=-0.061 Sum_probs=20.3
Q ss_pred CCCCCcEEEEecCHhhHHHHHHcCC
Q 009774 474 VDKPSEILFVTDVYQEATAAKAAGL 498 (526)
Q Consensus 474 ~~~p~~~l~VgDs~~Di~~A~~aG~ 498 (526)
++ ++.++++||+.+|...-+.++.
T Consensus 669 ~~-~d~vl~~GD~~nDe~Mf~~~~~ 692 (726)
T PRK14501 669 GP-YDFVLAIGDDTTDEDMFRALPE 692 (726)
T ss_pred CC-CCEEEEECCCCChHHHHHhccc
Confidence 44 6799999999999999998753
No 251
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=85.18 E-value=2.7 Score=47.34 Aligned_cols=95 Identities=17% Similarity=0.174 Sum_probs=72.8
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccce----EE-----eCC-------------cCCC
Q 009774 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSG----FF-----DTA-------------VGNK 459 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~----i~-----~~~-------------~~~K 459 (526)
+|.|++.+.++.+++.|+++.++|+.+...+..+.++. |+...=+. .+ |+. ...+
T Consensus 584 PPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~i---Gi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR 660 (972)
T KOG0202|consen 584 PPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREI---GIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFAR 660 (972)
T ss_pred CCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHh---CCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEe
Confidence 68999999999999999999999999999999999999 66543331 11 110 0123
Q ss_pred CCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcCCcE
Q 009774 460 RETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEV 500 (526)
Q Consensus 460 P~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG~~~ 500 (526)
-.|+.=.++.+.|.-. .+=+.|-||..+|.-+-+.|.+-.
T Consensus 661 ~~P~HK~kIVeaLq~~-geivAMTGDGVNDApALK~AdIGI 700 (972)
T KOG0202|consen 661 AEPQHKLKIVEALQSR-GEVVAMTGDGVNDAPALKKADIGI 700 (972)
T ss_pred cCchhHHHHHHHHHhc-CCEEEecCCCccchhhhhhcccce
Confidence 3555566777777775 778999999999999999887643
No 252
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=84.98 E-value=1 Score=43.45 Aligned_cols=43 Identities=9% Similarity=0.036 Sum_probs=33.1
Q ss_pred cCCCCCHHHHHHHHHHcC--CCCCCcEEEEecCHhhHHHHHHcCCcEE
Q 009774 456 VGNKRETPSYVEITNSLG--VDKPSEILFVTDVYQEATAAKAAGLEVV 501 (526)
Q Consensus 456 ~~~KP~p~~~~~~~~~l~--~~~p~~~l~VgDs~~Di~~A~~aG~~~i 501 (526)
...|+.. ...+++.++ ++ +++|++|||+.+|+...+.+|+..+
T Consensus 179 ~~sK~~a--l~~l~~~~~~~~~-~~~~i~~GD~~nD~~ml~~ag~~v~ 223 (225)
T TIGR02461 179 GSDKGKA--IKRLLDLYKLRPG-AIESVGLGDSENDFPMFEVVDLAFL 223 (225)
T ss_pred CCCHHHH--HHHHHHHhccccC-cccEEEEcCCHHHHHHHHhCCCcEe
Confidence 4556544 555666665 46 7899999999999999999998654
No 253
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=84.89 E-value=1.8 Score=42.80 Aligned_cols=17 Identities=41% Similarity=0.507 Sum_probs=14.1
Q ss_pred CceEEEEeccccccccc
Q 009774 283 FPRCIVLDIEGTTTPIS 299 (526)
Q Consensus 283 ~ikaVlFD~DGTL~d~~ 299 (526)
.-++++||+||||.+..
T Consensus 17 ~~~~~~lDyDGTl~~i~ 33 (266)
T COG1877 17 RKRLLFLDYDGTLTEIV 33 (266)
T ss_pred cceEEEEeccccccccc
Confidence 45799999999998743
No 254
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=84.71 E-value=1.5 Score=50.75 Aligned_cols=27 Identities=15% Similarity=0.183 Sum_probs=22.6
Q ss_pred HHcCCCCCCcEEEEecCHhhHHHHHHcC
Q 009774 470 NSLGVDKPSEILFVTDVYQEATAAKAAG 497 (526)
Q Consensus 470 ~~l~~~~p~~~l~VgDs~~Di~~A~~aG 497 (526)
+.+|.. ++.+++|||+.+|..+-+.++
T Consensus 775 ~~~g~~-~d~vl~~GDD~nDedMF~~~~ 801 (854)
T PLN02205 775 QERGML-PDFVLCIGDDRSDEDMFEVIT 801 (854)
T ss_pred HhcCCC-cccEEEEcCCccHHHHHHHhh
Confidence 345886 999999999999998887775
No 255
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=84.50 E-value=1.4 Score=42.35 Aligned_cols=13 Identities=31% Similarity=0.424 Sum_probs=11.1
Q ss_pred EEEeccccccccc
Q 009774 287 IVLDIEGTTTPIS 299 (526)
Q Consensus 287 VlFD~DGTL~d~~ 299 (526)
|+||+||||++..
T Consensus 1 i~~DlDGTLl~~~ 13 (254)
T PF08282_consen 1 IFSDLDGTLLNSD 13 (254)
T ss_dssp EEEECCTTTCSTT
T ss_pred cEEEECCceecCC
Confidence 7899999999854
No 256
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=84.35 E-value=2.9 Score=41.67 Aligned_cols=93 Identities=13% Similarity=0.074 Sum_probs=57.6
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHH---HhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLI---FGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPS 478 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~---l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~ 478 (526)
.+.||+.+.|+.|++.|.++.++||++...-+.. ++.+ |+.. +......-|.-.+..++-++. .. .+
T Consensus 38 ~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~l---G~~~-----v~e~~i~ssa~~~a~ylk~~~-~~-~k 107 (306)
T KOG2882|consen 38 KPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKL---GFNS-----VKEENIFSSAYAIADYLKKRK-PF-GK 107 (306)
T ss_pred CCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHh---Cccc-----cCcccccChHHHHHHHHHHhC-cC-CC
Confidence 5889999999999999999999999976544444 4455 5442 111111233333444443333 43 67
Q ss_pred cEEEEecCHhhHHHHHHcCCcEEEEeC
Q 009774 479 EILFVTDVYQEATAAKAAGLEVVISIR 505 (526)
Q Consensus 479 ~~l~VgDs~~Di~~A~~aG~~~i~v~~ 505 (526)
.++.+|-.. =-+..+++|+.......
T Consensus 108 ~Vyvig~~g-i~~eL~~aG~~~~g~~~ 133 (306)
T KOG2882|consen 108 KVYVIGEEG-IREELDEAGFEYFGGGP 133 (306)
T ss_pred eEEEecchh-hhHHHHHcCceeecCCC
Confidence 888888543 12345677876665443
No 257
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=83.79 E-value=1.2 Score=44.13 Aligned_cols=17 Identities=24% Similarity=0.360 Sum_probs=13.1
Q ss_pred CceEEEEeccccccccc
Q 009774 283 FPRCIVLDIEGTTTPIS 299 (526)
Q Consensus 283 ~ikaVlFD~DGTL~d~~ 299 (526)
|+|.|+|||||||++..
T Consensus 1 m~kli~~DlDGTLl~~~ 17 (272)
T PRK15126 1 MARLAAFDMDGTLLMPD 17 (272)
T ss_pred CccEEEEeCCCcCcCCC
Confidence 47888888888888753
No 258
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=83.49 E-value=1.5 Score=43.51 Aligned_cols=43 Identities=14% Similarity=0.153 Sum_probs=37.9
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCccccc
Q 009774 403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL 448 (526)
Q Consensus 403 l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~f 448 (526)
..|.+.++|++|+++|++++++|+.+...+...++.+ ++..+|
T Consensus 22 ~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l---~l~~~~ 64 (273)
T PRK00192 22 SYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKEL---GLEDPF 64 (273)
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc---CCCCCE
Confidence 5578899999999999999999999999999999998 776543
No 259
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=83.48 E-value=4.9 Score=37.86 Aligned_cols=87 Identities=14% Similarity=0.038 Sum_probs=56.3
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccc--cc--eEEeCC----------c--CCCCCHHHHH
Q 009774 403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKY--LS--GFFDTA----------V--GNKRETPSYV 466 (526)
Q Consensus 403 l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~--fd--~i~~~~----------~--~~KP~p~~~~ 466 (526)
..|++.++|+.+.+ .|.++|.|.+....++.+++.+ ++... +. .+.+.. + ..|+-.
T Consensus 46 kRP~l~eFL~~~~~-~feIvVwTAa~~~ya~~~l~~l---~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKdL~---- 117 (195)
T TIGR02245 46 MRPYLHEFLTSAYE-DYDIVIWSATSMKWIEIKMTEL---GVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKPLG---- 117 (195)
T ss_pred eCCCHHHHHHHHHh-CCEEEEEecCCHHHHHHHHHHh---cccCCccceEEEEeccccceeeEeeccCcEEEeecH----
Confidence 45999999999998 5999999999999999999987 44211 11 111211 1 134422
Q ss_pred HHHHHcC--CCCCCcEEEEecCHhhHHHHHHcCC
Q 009774 467 EITNSLG--VDKPSEILFVTDVYQEATAAKAAGL 498 (526)
Q Consensus 467 ~~~~~l~--~~~p~~~l~VgDs~~Di~~A~~aG~ 498 (526)
.+-..++ .+ .+++++|+|++.-...--..|+
T Consensus 118 ~lw~~l~~~~~-~~ntiiVDd~p~~~~~~P~N~i 150 (195)
T TIGR02245 118 VIWALLPEFYS-MKNTIMFDDLRRNFLMNPQNGL 150 (195)
T ss_pred HhhhhcccCCC-cccEEEEeCCHHHHhcCCCCcc
Confidence 2222443 35 7899999999965433333344
No 260
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=83.40 E-value=2.9 Score=39.00 Aligned_cols=89 Identities=18% Similarity=0.169 Sum_probs=0.0
Q ss_pred CCCCCceEEEEeccccccccccccccchhhHHhhHHhhhhhhcCChhhHHHHHHHHHHhHHhhhhccCCccCCCCCCCch
Q 009774 279 GSGLFPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGK 358 (526)
Q Consensus 279 ~~~~~ikaVlFD~DGTL~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (526)
..++.--.++||+||||.....
T Consensus 6 ~~r~~~~l~lfdvdgtLt~~r~---------------------------------------------------------- 27 (252)
T KOG3189|consen 6 AARDEETLCLFDVDGTLTPPRQ---------------------------------------------------------- 27 (252)
T ss_pred hhcCCceEEEEecCCccccccc----------------------------------------------------------
Q ss_pred HHHHHHHHHHHHHHHhhhhcchhhHhhhHHHHHHhhhcccccCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhh
Q 009774 359 EEVIAALVANVDAMIKADRKITALKQLQGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGN 438 (526)
Q Consensus 359 ~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~y~~~~~~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~ 438 (526)
...|.+.++|+.||+. +.+++|-.+.-..+..-+ -
T Consensus 28 -------------------------------------------~~~~e~~~~l~~lr~~-v~ig~VggsDl~k~~eql-G 62 (252)
T KOG3189|consen 28 -------------------------------------------KVTPEMLEFLQKLRKK-VTIGFVGGSDLSKQQEQL-G 62 (252)
T ss_pred -------------------------------------------cCCHHHHHHHHHHhhh-eEEEEeecHHHHHHHHHh-c
Q ss_pred cCCCCcccccceEE-eC--CcCCCCCHHHHHHHHHHcC
Q 009774 439 SNYGDLRKYLSGFF-DT--AVGNKRETPSYVEITNSLG 473 (526)
Q Consensus 439 l~~~gl~~~fd~i~-~~--~~~~KP~p~~~~~~~~~l~ 473 (526)
- .+.+.||.++ ++ +...--.+..-+.+...+|
T Consensus 63 ~---~Vl~~fDY~F~ENGl~~yk~gk~~~~Qsi~~~LG 97 (252)
T KOG3189|consen 63 D---NVLEEFDYVFSENGLVAYKGGKLLSKQSIINHLG 97 (252)
T ss_pred h---hHHhhhcccccCCCeeEeeCCcchhHHHHHHHHh
No 261
>PLN02887 hydrolase family protein
Probab=83.36 E-value=3.5 Score=45.56 Aligned_cols=32 Identities=13% Similarity=0.003 Sum_probs=21.6
Q ss_pred CCceEEEEeccccccccccccccchhhHHhhHHhh
Q 009774 282 LFPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKH 316 (526)
Q Consensus 282 ~~ikaVlFD~DGTL~d~~~~~~~~~~~~~~~~~~~ 316 (526)
+++|.|+|||||||++... .+-+...+.+..+
T Consensus 306 ~~iKLIa~DLDGTLLn~d~---~Is~~t~eAI~kl 337 (580)
T PLN02887 306 PKFSYIFCDMDGTLLNSKS---QISETNAKALKEA 337 (580)
T ss_pred cCccEEEEeCCCCCCCCCC---ccCHHHHHHHHHH
Confidence 5799999999999998642 2333444444443
No 262
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=82.40 E-value=2.9 Score=41.40 Aligned_cols=20 Identities=30% Similarity=0.208 Sum_probs=14.9
Q ss_pred CCCCceEEEEeccccccccc
Q 009774 280 SGLFPRCIVLDIEGTTTPIS 299 (526)
Q Consensus 280 ~~~~ikaVlFD~DGTL~d~~ 299 (526)
+...++.|++||||||++..
T Consensus 3 ~~~~~~lI~~DlDGTLL~~~ 22 (271)
T PRK03669 3 SLQDPLLIFTDLDGTLLDSH 22 (271)
T ss_pred CcCCCeEEEEeCccCCcCCC
Confidence 45677888888888888753
No 263
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=81.85 E-value=7.1 Score=38.20 Aligned_cols=76 Identities=9% Similarity=-0.046 Sum_probs=51.0
Q ss_pred CCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHc
Q 009774 417 LGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAA 496 (526)
Q Consensus 417 ~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~a 496 (526)
.-+++++||..+.....+.++.|. .|.-.+|..+--.+..| -.+|+.++-. +|++|...-++.|. .
T Consensus 185 ~piRtalVTAR~apah~RvI~TLr--~Wgv~vDEafFLgG~~K------~~vL~~~~ph-----IFFDDQ~~H~~~a~-~ 250 (264)
T PF06189_consen 185 SPIRTALVTARSAPAHERVIRTLR--SWGVRVDEAFFLGGLPK------GPVLKAFRPH-----IFFDDQDGHLESAS-K 250 (264)
T ss_pred CceEEEEEEcCCCchhHHHHHHHH--HcCCcHhHHHHhCCCch------hHHHHhhCCC-----EeecCchhhhhHhh-c
Confidence 458899999988777777877762 22222333221112223 2355566655 89999999999998 8
Q ss_pred CCcEEEEeCC
Q 009774 497 GLEVVISIRP 506 (526)
Q Consensus 497 G~~~i~v~~~ 506 (526)
++.++.|.++
T Consensus 251 ~vps~hVP~g 260 (264)
T PF06189_consen 251 VVPSGHVPYG 260 (264)
T ss_pred CCCEEeccCC
Confidence 8899998876
No 264
>KOG3128 consensus Uncharacterized conserved protein [Function unknown]
Probab=80.95 E-value=3.2 Score=40.26 Aligned_cols=93 Identities=11% Similarity=0.066 Sum_probs=58.2
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE------eC----CcCCCCCHHHH-----
Q 009774 401 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF------DT----AVGNKRETPSY----- 465 (526)
Q Consensus 401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~------~~----~~~~KP~p~~~----- 465 (526)
+.+.+|..++++.|+++++|+.|.|.+-....+..++... ++.+ +..++ +. .+..+|-...|
T Consensus 137 i~lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~--~~~p-n~k~vSN~~~F~edg~l~gF~~~Lihtfnkn~~ 213 (298)
T KOG3128|consen 137 IALREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKL--VLHP-NVKFVSNYMDFDEDGNLCGFSQPLIHTFNKNSS 213 (298)
T ss_pred HHHHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHh--ccCc-cHHhhhhhhhhcccchhhhhhHHHHHHHccchH
Confidence 3577899999999999999999999998777776666542 2222 22222 11 11223322222
Q ss_pred --HHHHHHcCC-CCCCcEEEEecCHhhHHHHHHc
Q 009774 466 --VEITNSLGV-DKPSEILFVTDVYQEATAAKAA 496 (526)
Q Consensus 466 --~~~~~~l~~-~~p~~~l~VgDs~~Di~~A~~a 496 (526)
+...+.+.. +....+++.|||..|+..|-.+
T Consensus 214 v~~~~s~yf~~~~~~~nVillGdsigdl~ma~gv 247 (298)
T KOG3128|consen 214 VLQNESEYFHQLAGRVNVILLGDSIGDLHMADGV 247 (298)
T ss_pred HHHhhhHHHhhccCCceEEEeccccccchhhcCC
Confidence 222333332 1257899999999999887654
No 265
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=80.67 E-value=8.3 Score=38.81 Aligned_cols=87 Identities=17% Similarity=0.186 Sum_probs=58.3
Q ss_pred ccCCCHHHHHHHHHHCC-CeEEEEeCchHHHHHHHHhh-----cCCCCcc-----cccceEEeCCcCCCCCHHHHHHHHH
Q 009774 402 EVFDDVPEALEKWHSLG-TKVYIYSSGSRLAQRLIFGN-----SNYGDLR-----KYLSGFFDTAVGNKRETPSYVEITN 470 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~G-~~l~vvTn~~~~~~~~~l~~-----l~~~gl~-----~~fd~i~~~~~~~KP~p~~~~~~~~ 470 (526)
+++|||....+.|.+.| .++.-+||++......+-+. ++.+.+. ..||.++.+....|-. ....++.
T Consensus 196 ~~ipGV~~~yr~l~~~~~apvfYvSnSPw~~f~~L~efi~~~~~P~GPl~L~~~g~~~~~i~~sga~rK~~--~l~nil~ 273 (373)
T COG4850 196 QVIPGVSAWYRALTNLGDAPVFYVSNSPWQLFPTLQEFITNRNFPYGPLLLRRWGGVLDNIIESGAARKGQ--SLRNILR 273 (373)
T ss_pred CCCCCHHHHHHHHHhcCCCCeEEecCChhHhHHHHHHHHhcCCCCCCchhHhhcCCcccccccchhhhccc--HHHHHHH
Confidence 69999999999999987 89999999997754433222 2222211 2345555444445543 3555777
Q ss_pred HcCCCCCCcEEEEecCH-hhHHHH
Q 009774 471 SLGVDKPSEILFVTDVY-QEATAA 493 (526)
Q Consensus 471 ~l~~~~p~~~l~VgDs~-~Di~~A 493 (526)
++.=. +.+.||||- .|.+.-
T Consensus 274 ~~p~~---kfvLVGDsGE~DpeIY 294 (373)
T COG4850 274 RYPDR---KFVLVGDSGEHDPEIY 294 (373)
T ss_pred hCCCc---eEEEecCCCCcCHHHH
Confidence 77554 899999997 776643
No 266
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=78.03 E-value=2 Score=42.26 Aligned_cols=18 Identities=17% Similarity=0.427 Sum_probs=16.3
Q ss_pred CCceEEEEeccccccccc
Q 009774 282 LFPRCIVLDIEGTTTPIS 299 (526)
Q Consensus 282 ~~ikaVlFD~DGTL~d~~ 299 (526)
|++|.|+|||||||++..
T Consensus 1 ~~~kli~~DlDGTLl~~~ 18 (264)
T COG0561 1 MMIKLLAFDLDGTLLDSN 18 (264)
T ss_pred CCeeEEEEcCCCCccCCC
Confidence 689999999999999865
No 267
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=77.32 E-value=3.9 Score=48.79 Aligned_cols=38 Identities=18% Similarity=0.258 Sum_probs=34.8
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhc
Q 009774 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNS 439 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l 439 (526)
+|.||+.++++.|++.|+++.++|+-..+.+..+.+..
T Consensus 631 ~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~ 668 (1057)
T TIGR01652 631 KLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSC 668 (1057)
T ss_pred hhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHh
Confidence 68899999999999999999999999988888887666
No 268
>PLN02382 probable sucrose-phosphatase
Probab=76.96 E-value=4.1 Score=43.19 Aligned_cols=45 Identities=16% Similarity=0.160 Sum_probs=38.7
Q ss_pred CHHHHHHHHHHc---CCCCCCcEEEEecCHhhHHHHHHcCCcEEEEeCC
Q 009774 461 ETPSYVEITNSL---GVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 506 (526)
Q Consensus 461 ~p~~~~~~~~~l---~~~~p~~~l~VgDs~~Di~~A~~aG~~~i~v~~~ 506 (526)
+-....++++.+ |++ +++++.+||+.+|+..-+.+|...|.+.+.
T Consensus 176 Kg~Al~~L~~~~~~~gi~-~~~~iafGDs~NDleMl~~ag~~gvam~NA 223 (413)
T PLN02382 176 KGQALAYLLKKLKAEGKA-PVNTLVCGDSGNDAELFSVPDVYGVMVSNA 223 (413)
T ss_pred HHHHHHHHHHHhhhcCCC-hhcEEEEeCCHHHHHHHhcCCCCEEEEcCC
Confidence 457788999999 997 999999999999999999999777777553
No 269
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=76.83 E-value=1.2 Score=40.16 Aligned_cols=16 Identities=38% Similarity=0.561 Sum_probs=12.9
Q ss_pred eEEEEecccccccccc
Q 009774 285 RCIVLDIEGTTTPISF 300 (526)
Q Consensus 285 kaVlFD~DGTL~d~~~ 300 (526)
|+++||+||||++...
T Consensus 1 k~LVlDLD~TLv~~~~ 16 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSS 16 (159)
T ss_dssp EEEEEE-CTTTEEEES
T ss_pred CEEEEeCCCcEEEEee
Confidence 6899999999998753
No 270
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=74.90 E-value=7.6 Score=41.56 Aligned_cols=83 Identities=13% Similarity=0.213 Sum_probs=66.4
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEEE
Q 009774 403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILF 482 (526)
Q Consensus 403 l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~ 482 (526)
.-||++|=+.+||+.|++...+|+.++-....+.+.. |++++.. ..||. -=..+.++..-+ ..=+-|
T Consensus 448 vK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EA---GVDdfiA-------eatPE--dK~~~I~~eQ~~-grlVAM 514 (681)
T COG2216 448 VKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEA---GVDDFIA-------EATPE--DKLALIRQEQAE-GRLVAM 514 (681)
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHh---Cchhhhh-------cCChH--HHHHHHHHHHhc-CcEEEE
Confidence 5699999999999999999999999999998888888 8876432 34653 335566677775 778999
Q ss_pred EecCHhhHHHHHHcCC
Q 009774 483 VTDVYQEATAAKAAGL 498 (526)
Q Consensus 483 VgDs~~Di~~A~~aG~ 498 (526)
.||..+|.-+-.+|.+
T Consensus 515 tGDGTNDAPALAqAdV 530 (681)
T COG2216 515 TGDGTNDAPALAQADV 530 (681)
T ss_pred cCCCCCcchhhhhcch
Confidence 9999999877666654
No 271
>PLN03190 aminophospholipid translocase; Provisional
Probab=72.26 E-value=4.2 Score=48.85 Aligned_cols=37 Identities=24% Similarity=0.337 Sum_probs=32.0
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhh
Q 009774 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGN 438 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~ 438 (526)
+|.+|+.++++.|++.|+++.++|+........+-..
T Consensus 726 ~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s 762 (1178)
T PLN03190 726 KLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYS 762 (1178)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH
Confidence 6889999999999999999999999887766665543
No 272
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=72.25 E-value=54 Score=31.94 Aligned_cols=95 Identities=15% Similarity=0.145 Sum_probs=62.2
Q ss_pred ccCCCHHHHHHHHHHC---CCeEEEEeCchHHHHHHHHhhcCCCCcccccc--eEEeCCcCCCCCHHHHHHHHHHcCCCC
Q 009774 402 EVFDDVPEALEKWHSL---GTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLS--GFFDTAVGNKRETPSYVEITNSLGVDK 476 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~---G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd--~i~~~~~~~KP~p~~~~~~~~~l~~~~ 476 (526)
.|+|+..+++++.+.. |+.+.-+++.+....+.. ..+ |-.-.-. .-+.+ +.+--+|+.+..+.+..++.
T Consensus 104 ~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l-~~~---G~~~vmPlg~pIGs-g~Gi~~~~~I~~I~e~~~vp- 177 (248)
T cd04728 104 TLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRL-EDA---GCAAVMPLGSPIGS-GQGLLNPYNLRIIIERADVP- 177 (248)
T ss_pred ccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH-HHc---CCCEeCCCCcCCCC-CCCCCCHHHHHHHHHhCCCc-
Confidence 5899999999999887 999884455455554443 333 2221100 11111 12233588888777765543
Q ss_pred CCcEEEEe---cCHhhHHHHHHcCCcEEEEeCC
Q 009774 477 PSEILFVT---DVYQEATAAKAAGLEVVISIRP 506 (526)
Q Consensus 477 p~~~l~Vg---Ds~~Di~~A~~aG~~~i~v~~~ 506 (526)
+++| .++.|+..|.+.|...+.+++.
T Consensus 178 ----VI~egGI~tpeda~~AmelGAdgVlV~SA 206 (248)
T cd04728 178 ----VIVDAGIGTPSDAAQAMELGADAVLLNTA 206 (248)
T ss_pred ----EEEeCCCCCHHHHHHHHHcCCCEEEEChH
Confidence 6666 5578999999999999999876
No 273
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=72.01 E-value=9 Score=37.93 Aligned_cols=14 Identities=29% Similarity=0.503 Sum_probs=12.0
Q ss_pred eEEEEecccccccc
Q 009774 285 RCIVLDIEGTTTPI 298 (526)
Q Consensus 285 kaVlFD~DGTL~d~ 298 (526)
.+|+||+||||++.
T Consensus 15 ~li~~D~DGTLl~~ 28 (266)
T PRK10187 15 YAWFFDLDGTLAEI 28 (266)
T ss_pred EEEEEecCCCCCCC
Confidence 58899999999974
No 274
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=71.79 E-value=16 Score=31.59 Aligned_cols=82 Identities=16% Similarity=0.057 Sum_probs=54.1
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCch-HHHHHHHHhhcCCCCcccccceEE------eCCcCCCCCHHHHHHHHHHcCC
Q 009774 402 EVFDDVPEALEKWHSLGTKVYIYSSGS-RLAQRLIFGNSNYGDLRKYLSGFF------DTAVGNKRETPSYVEITNSLGV 474 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~-~~~~~~~l~~l~~~gl~~~fd~i~------~~~~~~KP~p~~~~~~~~~l~~ 474 (526)
..|+++...|..|+++|+.++++|++. .+.+...|+.+ .+..-+-.-. ......--.-..|..+-+..++
T Consensus 44 ~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~f---kvk~~Gvlkps~e~ft~~~~g~gsklghfke~~n~s~~ 120 (144)
T KOG4549|consen 44 IFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETF---KVKQTGVLKPSLEEFTFEAVGDGSKLGHFKEFTNNSNS 120 (144)
T ss_pred eeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHh---ccCcccccchhhhcCceeeecCcccchhHHHHhhccCc
Confidence 589999999999999999999999985 45666777777 3332111111 0011111223456777777788
Q ss_pred CCCCcEEEEecCH
Q 009774 475 DKPSEILFVTDVY 487 (526)
Q Consensus 475 ~~p~~~l~VgDs~ 487 (526)
. -.+..+..|-.
T Consensus 121 ~-~k~~~~fdDes 132 (144)
T KOG4549|consen 121 I-EKNKQVFDDES 132 (144)
T ss_pred c-hhceeeecccc
Confidence 6 77777777754
No 275
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=69.25 E-value=6.1 Score=37.49 Aligned_cols=37 Identities=16% Similarity=0.082 Sum_probs=34.0
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhc
Q 009774 403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNS 439 (526)
Q Consensus 403 l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l 439 (526)
+.|...+.|++|+++|++++++|+.+...++..++.+
T Consensus 19 i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l 55 (215)
T TIGR01487 19 ISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLI 55 (215)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHh
Confidence 5578899999999999999999999999888888888
No 276
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=68.08 E-value=7.9 Score=37.77 Aligned_cols=40 Identities=23% Similarity=0.218 Sum_probs=35.4
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcc
Q 009774 403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLR 445 (526)
Q Consensus 403 l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~ 445 (526)
+-+...+.|++|+++|++++++|+.+.......++.+ ++.
T Consensus 17 i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~---~~~ 56 (256)
T TIGR00099 17 ISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKEL---GLD 56 (256)
T ss_pred cCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc---CCC
Confidence 5578899999999999999999999999888888888 654
No 277
>PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional
Probab=68.07 E-value=49 Score=33.68 Aligned_cols=94 Identities=17% Similarity=0.180 Sum_probs=63.9
Q ss_pred ccCCCHHHHHHHHHHC---CCeEEEEeCchHHHHHHHHhhcCCCCcc---cccceEEeCCcCCCCCHHHHHHHHHHcCCC
Q 009774 402 EVFDDVPEALEKWHSL---GTKVYIYSSGSRLAQRLIFGNSNYGDLR---KYLSGFFDTAVGNKRETPSYVEITNSLGVD 475 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~---G~~l~vvTn~~~~~~~~~l~~l~~~gl~---~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~ 475 (526)
.++|+..+++++.+.. |+.+.++++.+....+. +..+ |-. ++=.-| .+ +.+-.+|+.+..+.+...+.
T Consensus 178 ~llpd~~~~v~aa~~L~~~Gf~v~~yc~~d~~~a~~-l~~~---g~~avmPl~~pI-Gs-g~gv~~p~~i~~~~e~~~vp 251 (326)
T PRK11840 178 TLYPDMVETLKATEILVKEGFQVMVYCSDDPIAAKR-LEDA---GAVAVMPLGAPI-GS-GLGIQNPYTIRLIVEGATVP 251 (326)
T ss_pred CcccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHH-HHhc---CCEEEeeccccc-cC-CCCCCCHHHHHHHHHcCCCc
Confidence 5889999999999887 99995555555555543 3434 221 111111 11 11222889999999886664
Q ss_pred CCCcEEEEecC---HhhHHHHHHcCCcEEEEeCC
Q 009774 476 KPSEILFVTDV---YQEATAAKAAGLEVVISIRP 506 (526)
Q Consensus 476 ~p~~~l~VgDs---~~Di~~A~~aG~~~i~v~~~ 506 (526)
++||-. ++|+..|.+.|...++++.+
T Consensus 252 -----VivdAGIg~~sda~~AmelGadgVL~nSa 280 (326)
T PRK11840 252 -----VLVDAGVGTASDAAVAMELGCDGVLMNTA 280 (326)
T ss_pred -----EEEeCCCCCHHHHHHHHHcCCCEEEEcce
Confidence 777744 58999999999999999986
No 278
>PRK00208 thiG thiazole synthase; Reviewed
Probab=67.47 E-value=63 Score=31.55 Aligned_cols=94 Identities=14% Similarity=0.084 Sum_probs=60.8
Q ss_pred ccCCCHHHHHHHHHHC---CCeEE-EEeCchHHHHHHHHhhcCCCCcccccc--eEEeCCcCCCCCHHHHHHHHHHcCCC
Q 009774 402 EVFDDVPEALEKWHSL---GTKVY-IYSSGSRLAQRLIFGNSNYGDLRKYLS--GFFDTAVGNKRETPSYVEITNSLGVD 475 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~---G~~l~-vvTn~~~~~~~~~l~~l~~~gl~~~fd--~i~~~~~~~KP~p~~~~~~~~~l~~~ 475 (526)
.++|+..+++++.+.. |+.+. ++++.+. ..+. +..+ |-.-.-- .-+.+ +.+--+|+....+.+..++
T Consensus 104 ~llpd~~~tv~aa~~L~~~Gf~vlpyc~~d~~-~ak~-l~~~---G~~~vmPlg~pIGs-g~gi~~~~~i~~i~e~~~v- 176 (250)
T PRK00208 104 TLLPDPIETLKAAEILVKEGFVVLPYCTDDPV-LAKR-LEEA---GCAAVMPLGAPIGS-GLGLLNPYNLRIIIEQADV- 176 (250)
T ss_pred CCCcCHHHHHHHHHHHHHCCCEEEEEeCCCHH-HHHH-HHHc---CCCEeCCCCcCCCC-CCCCCCHHHHHHHHHhcCC-
Confidence 4789999999999887 99998 5555554 4443 3433 3221100 11111 1223347777777776554
Q ss_pred CCCcEEEEe---cCHhhHHHHHHcCCcEEEEeCC
Q 009774 476 KPSEILFVT---DVYQEATAAKAAGLEVVISIRP 506 (526)
Q Consensus 476 ~p~~~l~Vg---Ds~~Di~~A~~aG~~~i~v~~~ 506 (526)
.+++| .++.|+..|.+.|...|.+++.
T Consensus 177 ----pVIveaGI~tpeda~~AmelGAdgVlV~SA 206 (250)
T PRK00208 177 ----PVIVDAGIGTPSDAAQAMELGADAVLLNTA 206 (250)
T ss_pred ----eEEEeCCCCCHHHHHHHHHcCCCEEEEChH
Confidence 36676 4568999999999999999876
No 279
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=66.85 E-value=15 Score=34.75 Aligned_cols=50 Identities=14% Similarity=0.122 Sum_probs=37.9
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE
Q 009774 403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF 452 (526)
Q Consensus 403 l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~ 452 (526)
..||+.+.|++|+.++.++=.+||...+..+...++++..|+.-.-+.|+
T Consensus 24 avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~v~eeei~ 73 (262)
T KOG3040|consen 24 AVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFDVSEEEIF 73 (262)
T ss_pred cCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCCccHHHhc
Confidence 67999999999999999999999998887776666664335543333344
No 280
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=66.44 E-value=10 Score=43.72 Aligned_cols=15 Identities=33% Similarity=0.397 Sum_probs=12.7
Q ss_pred ceEEEEecccccccc
Q 009774 284 PRCIVLDIEGTTTPI 298 (526)
Q Consensus 284 ikaVlFD~DGTL~d~ 298 (526)
-++++||+||||++.
T Consensus 507 ~rll~LDyDGTL~~~ 521 (797)
T PLN03063 507 NRLLILGFYGTLTEP 521 (797)
T ss_pred CeEEEEecCccccCC
Confidence 379999999999863
No 281
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=66.34 E-value=10 Score=44.14 Aligned_cols=38 Identities=21% Similarity=0.233 Sum_probs=30.5
Q ss_pred ccCCCHHHHHHHHHHC-CCeEEEEeCchHHHHHHHHhhc
Q 009774 402 EVFDDVPEALEKWHSL-GTKVYIYSSGSRLAQRLIFGNS 439 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~-G~~l~vvTn~~~~~~~~~l~~l 439 (526)
.+.|++.++|+.|.+. +..++|+|+.+.+.++..+...
T Consensus 622 ~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~ 660 (934)
T PLN03064 622 RLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEF 660 (934)
T ss_pred CCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCC
Confidence 3567888889999865 5689999999999888887654
No 282
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=65.93 E-value=8.4 Score=36.76 Aligned_cols=41 Identities=17% Similarity=0.026 Sum_probs=35.5
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCccc
Q 009774 403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK 446 (526)
Q Consensus 403 l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~ 446 (526)
+-|...+.|++|+++|++++++|+.+.......++.+ ++..
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l---~~~~ 61 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLI---GTSG 61 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHh---CCCC
Confidence 4577889999999999999999999999888888888 6553
No 283
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=64.85 E-value=3.4 Score=40.28 Aligned_cols=15 Identities=33% Similarity=0.596 Sum_probs=13.0
Q ss_pred eEEEEeccccccccc
Q 009774 285 RCIVLDIEGTTTPIS 299 (526)
Q Consensus 285 kaVlFD~DGTL~d~~ 299 (526)
.+++||+||||++..
T Consensus 4 ~~l~lD~DGTL~~~~ 18 (244)
T TIGR00685 4 RAFFFDYDGTLSEIV 18 (244)
T ss_pred EEEEEecCccccCCc
Confidence 689999999999753
No 284
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=63.13 E-value=10 Score=35.95 Aligned_cols=37 Identities=22% Similarity=0.183 Sum_probs=33.2
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhc
Q 009774 403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNS 439 (526)
Q Consensus 403 l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l 439 (526)
+.|...+.|++|+++|++++++|+.+.......++.+
T Consensus 16 i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l 52 (225)
T TIGR01482 16 INESALEAIRKAESVGIPVVLVTGNSVQFARALAKLI 52 (225)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHh
Confidence 4577889999999999999999999999888888888
No 285
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=61.07 E-value=13 Score=36.50 Aligned_cols=40 Identities=23% Similarity=0.285 Sum_probs=35.5
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcc
Q 009774 403 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLR 445 (526)
Q Consensus 403 l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~ 445 (526)
+.|...+.|++|+++|++++++|+.+.......++.+ ++.
T Consensus 21 i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l---~~~ 60 (272)
T PRK10530 21 ILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQAL---ALD 60 (272)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhc---CCC
Confidence 5577889999999999999999999999888888888 654
No 286
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=60.88 E-value=60 Score=36.54 Aligned_cols=44 Identities=5% Similarity=0.071 Sum_probs=37.7
Q ss_pred CCCCHHHHHHHHHHcCCCCCCcEEEE--ecCHhhHHHHHHcCCcEEE
Q 009774 458 NKRETPSYVEITNSLGVDKPSEILFV--TDVYQEATAAKAAGLEVVI 502 (526)
Q Consensus 458 ~KP~p~~~~~~~~~l~~~~p~~~l~V--gDs~~Di~~A~~aG~~~i~ 502 (526)
.-.+-...+.+++.++++ .++++.| ||+.+|+..-+.+|...+.
T Consensus 611 gvdKG~AL~~L~e~~gI~-~~eViafalGDs~NDisMLe~Ag~gVAM 656 (694)
T PRK14502 611 GNDKGKAIKILNELFRLN-FGNIHTFGLGDSENDYSMLETVDSPILV 656 (694)
T ss_pred CCCHHHHHHHHHHHhCCC-ccceEEEEcCCcHhhHHHHHhCCceEEE
Confidence 345567889999999997 8999999 9999999999999996655
No 287
>CHL00162 thiG thiamin biosynthesis protein G; Validated
Probab=60.11 E-value=1.2e+02 Score=29.86 Aligned_cols=92 Identities=12% Similarity=0.092 Sum_probs=67.5
Q ss_pred ccCCCHHHHHHHH---HHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE---eC--CcCCCCCHHHHHHHHHHcC
Q 009774 402 EVFDDVPEALEKW---HSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF---DT--AVGNKRETPSYVEITNSLG 473 (526)
Q Consensus 402 ~l~pgv~~~L~~L---~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~---~~--~~~~KP~p~~~~~~~~~l~ 473 (526)
.|+|+..++|+.. -+.|+.+--.+|.+....++. +.. |- ..+- .. .+.+=.+|..++.++++.+
T Consensus 118 ~LlPD~~etl~Aae~Lv~eGF~VlPY~~~D~v~a~rL-ed~---Gc----~aVMPlgsPIGSg~Gl~n~~~l~~i~e~~~ 189 (267)
T CHL00162 118 YLLPDPIGTLKAAEFLVKKGFTVLPYINADPMLAKHL-EDI---GC----ATVMPLGSPIGSGQGLQNLLNLQIIIENAK 189 (267)
T ss_pred ccCCChHHHHHHHHHHHHCCCEEeecCCCCHHHHHHH-HHc---CC----eEEeeccCcccCCCCCCCHHHHHHHHHcCC
Confidence 5889998888765 467999999999998877654 433 32 1221 22 2334557888888888877
Q ss_pred CCCCCcEEEEec---CHhhHHHHHHcCCcEEEEeCC
Q 009774 474 VDKPSEILFVTD---VYQEATAAKAAGLEVVISIRP 506 (526)
Q Consensus 474 ~~~p~~~l~VgD---s~~Di~~A~~aG~~~i~v~~~ 506 (526)
+. ++||- +++|+..|.+.|...++++.+
T Consensus 190 vp-----VivdAGIgt~sDa~~AmElGaDgVL~nSa 220 (267)
T CHL00162 190 IP-----VIIDAGIGTPSEASQAMELGASGVLLNTA 220 (267)
T ss_pred Cc-----EEEeCCcCCHHHHHHHHHcCCCEEeecce
Confidence 75 66664 458999999999999999876
No 288
>COG0731 Fe-S oxidoreductases [Energy production and conversion]
Probab=59.94 E-value=13 Score=37.30 Aligned_cols=66 Identities=15% Similarity=0.287 Sum_probs=46.1
Q ss_pred CccCCCHHHHHHHHHHCC-CeEEEEeCchHHHHHHHHhhcCCCCcccccceEE---eC------CcCCCCC-HHHHHHHH
Q 009774 401 GEVFDDVPEALEKWHSLG-TKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF---DT------AVGNKRE-TPSYVEIT 469 (526)
Q Consensus 401 ~~l~pgv~~~L~~L~~~G-~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~---~~------~~~~KP~-p~~~~~~~ 469 (526)
..|||...++++.+|+.| ++++|+||++.+. +++.+ . .+|.++ |. ..-.+|+ +..+.+++
T Consensus 91 PTLy~~L~elI~~~k~~g~~~tflvTNgslpd---v~~~L---~---~~dql~~sLdA~~~~~~~~InRP~~~~~~e~il 161 (296)
T COG0731 91 PTLYPNLGELIEEIKKRGKKTTFLVTNGSLPD---VLEEL---K---LPDQLYVSLDAPDEKTFRRINRPHKKDSWEKIL 161 (296)
T ss_pred cccccCHHHHHHHHHhcCCceEEEEeCCChHH---HHHHh---c---cCCEEEEEeccCCHHHHHHhcCCCCcchHHHHH
Confidence 369999999999999999 7999999999954 44444 1 355554 21 1234663 36677777
Q ss_pred HHcCCC
Q 009774 470 NSLGVD 475 (526)
Q Consensus 470 ~~l~~~ 475 (526)
+.+..-
T Consensus 162 e~L~~~ 167 (296)
T COG0731 162 EGLEIF 167 (296)
T ss_pred HHHHHh
Confidence 777654
No 289
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=59.88 E-value=15 Score=40.75 Aligned_cols=50 Identities=20% Similarity=0.107 Sum_probs=41.0
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE
Q 009774 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF 452 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~ 452 (526)
.+++.|++.++|+++.+. |.++|+|=+++.++..+++-+. .=..||..-+
T Consensus 199 ~vKlRP~~~efL~~~skl-femhVyTmg~R~YA~~i~~liD--P~~~lF~dRI 248 (635)
T KOG0323|consen 199 LVKLRPFVHEFLKEANKL-FEMHVYTMGTRDYALEIAKLID--PEGKYFGDRI 248 (635)
T ss_pred EEEeCccHHHHHHHHHhh-ceeEEEeccchHHHHHHHHHhC--CCCccccceE
Confidence 457999999999999987 9999999999999999998873 2235565433
No 290
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=59.41 E-value=7.2 Score=39.16 Aligned_cols=51 Identities=14% Similarity=0.093 Sum_probs=39.5
Q ss_pred cCCCCCHHHHHHHHH--------HcCCCCCCcEEEEecCH-hhHHHHH---------------HcCCcEEEEeCC
Q 009774 456 VGNKRETPSYVEITN--------SLGVDKPSEILFVTDVY-QEATAAK---------------AAGLEVVISIRP 506 (526)
Q Consensus 456 ~~~KP~p~~~~~~~~--------~l~~~~p~~~l~VgDs~-~Di~~A~---------------~aG~~~i~v~~~ 506 (526)
..+||.+=.|.++-. +.+..++....||||++ +|+.+|. .-|+.+|++..|
T Consensus 268 t~GKPt~ltY~~A~~vl~~~ak~~~~~~~~k~lymvGDNP~sDv~GA~lf~~yap~~~~g~~~~~~w~SILV~TG 342 (389)
T KOG1618|consen 268 TLGKPTKLTYDYAEDVLRRQAKRRGGAAPIKKLYMVGDNPMSDVRGANLFHQYAPELGAGGSANYGWISILVRTG 342 (389)
T ss_pred ccCCCceehHHhHHHHHHHHHHhhcccCCcceeeeecCCCcccccccccccccccccccccccCCCceEEEEeee
Confidence 346888877777542 23444478999999999 8999997 778899999877
No 291
>PF05690 ThiG: Thiazole biosynthesis protein ThiG; InterPro: IPR008867 This family consists of several bacterial thiazole biosynthesis protein G sequences. ThiG, together with ThiF and ThiH, is proposed to be involved in the synthesis of 4-methyl-5-(b-hydroxyethyl)thiazole (THZ) which is an intermediate in the thiazole production pathway [].; GO: 0009228 thiamine biosynthetic process; PDB: 1WV2_B 1TYG_C 1XM3_B 2HTM_C 2YZR_C.
Probab=58.20 E-value=1.2e+02 Score=29.35 Aligned_cols=92 Identities=14% Similarity=0.131 Sum_probs=59.9
Q ss_pred ccCCCHHHHHHHH---HHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE---eC--CcCCCCCHHHHHHHHHHcC
Q 009774 402 EVFDDVPEALEKW---HSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF---DT--AVGNKRETPSYVEITNSLG 473 (526)
Q Consensus 402 ~l~pgv~~~L~~L---~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~---~~--~~~~KP~p~~~~~~~~~l~ 473 (526)
.|+|+..++|+.. -+.|+.+.-.+|.+....++..+ . |- ..+- .. .+.+=-+|..++.++++.+
T Consensus 104 ~L~PD~~etl~Aae~Lv~eGF~VlPY~~~D~v~akrL~d-~---Gc----aavMPlgsPIGSg~Gi~n~~~l~~i~~~~~ 175 (247)
T PF05690_consen 104 TLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLED-A---GC----AAVMPLGSPIGSGRGIQNPYNLRIIIERAD 175 (247)
T ss_dssp T--B-HHHHHHHHHHHHHTT-EEEEEE-S-HHHHHHHHH-T---T-----SEBEEBSSSTTT---SSTHHHHHHHHHHGS
T ss_pred CcCCChhHHHHHHHHHHHCCCEEeecCCCCHHHHHHHHH-C---CC----CEEEecccccccCcCCCCHHHHHHHHHhcC
Confidence 5889998888764 57899999999999887765444 3 32 1221 22 2233456788999999999
Q ss_pred CCCCCcEEEEec---CHhhHHHHHHcCCcEEEEeCC
Q 009774 474 VDKPSEILFVTD---VYQEATAAKAAGLEVVISIRP 506 (526)
Q Consensus 474 ~~~p~~~l~VgD---s~~Di~~A~~aG~~~i~v~~~ 506 (526)
+. ++|+- +++|..-|.+.|+..|+++..
T Consensus 176 vP-----vIvDAGiG~pSdaa~AMElG~daVLvNTA 206 (247)
T PF05690_consen 176 VP-----VIVDAGIGTPSDAAQAMELGADAVLVNTA 206 (247)
T ss_dssp SS-----BEEES---SHHHHHHHHHTT-SEEEESHH
T ss_pred Cc-----EEEeCCCCCHHHHHHHHHcCCceeehhhH
Confidence 97 55553 458999999999999999864
No 292
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=57.36 E-value=42 Score=35.47 Aligned_cols=100 Identities=19% Similarity=0.137 Sum_probs=72.8
Q ss_pred ccCCCHHHHHHHHHHC-CCeEEEEe-C-chHHHHHHHHhhcCCCCcccccceEE-eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774 402 EVFDDVPEALEKWHSL-GTKVYIYS-S-GSRLAQRLIFGNSNYGDLRKYLSGFF-DTAVGNKRETPSYVEITNSLGVDKP 477 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~-G~~l~vvT-n-~~~~~~~~~l~~l~~~gl~~~fd~i~-~~~~~~KP~p~~~~~~~~~l~~~~p 477 (526)
.-.|.+.+-|+.|.++ |++++-.. + .|.+.++..++.+ -...+|.++ |+.+...-+.+.+..+.+--.+-.|
T Consensus 138 ~~RpAA~eQL~~La~q~~v~~f~~~~~~~Pv~Iak~al~~a----k~~~~DvvIvDTAGRl~ide~Lm~El~~Ik~~~~P 213 (451)
T COG0541 138 TYRPAAIEQLKQLAEQVGVPFFGSGTEKDPVEIAKAALEKA----KEEGYDVVIVDTAGRLHIDEELMDELKEIKEVINP 213 (451)
T ss_pred cCChHHHHHHHHHHHHcCCceecCCCCCCHHHHHHHHHHHH----HHcCCCEEEEeCCCcccccHHHHHHHHHHHhhcCC
Confidence 3469999999999876 77766652 3 3555677778877 234578777 8888888899999998877665349
Q ss_pred CcEEEEecCHhhHH---HHH----HcCCcEEEEeC
Q 009774 478 SEILFVTDVYQEAT---AAK----AAGLEVVISIR 505 (526)
Q Consensus 478 ~~~l~VgDs~~Di~---~A~----~aG~~~i~v~~ 505 (526)
+++++|=|+..+=. .|+ +.|+..|.++.
T Consensus 214 ~E~llVvDam~GQdA~~~A~aF~e~l~itGvIlTK 248 (451)
T COG0541 214 DETLLVVDAMIGQDAVNTAKAFNEALGITGVILTK 248 (451)
T ss_pred CeEEEEEecccchHHHHHHHHHhhhcCCceEEEEc
Confidence 99999999884333 333 34788888864
No 293
>PRK08324 short chain dehydrogenase; Validated
Probab=56.52 E-value=21 Score=40.51 Aligned_cols=52 Identities=17% Similarity=0.318 Sum_probs=47.2
Q ss_pred CCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCC
Q 009774 198 PKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNH 249 (526)
Q Consensus 198 ~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~~~~~~ 249 (526)
|..+++|++|-|++++|.+..+|....+.+|.+++....+..+|...+++..
T Consensus 345 ~~p~~~l~~g~g~~~~g~~~~~a~~~~d~~~~~~~~~~~a~~~~~~~~l~~~ 396 (681)
T PRK08324 345 PNPRVVLIPGLGMFSFGKDKKTARVAADIYENAINVMRGAEAVGRYEPLSEQ 396 (681)
T ss_pred CCCeEEEECCCceEEeCCCHHHhhhhHHHHHHHHHHHhhhhhcCCccCCChh
Confidence 3469999999999999999999999999999999999999999988777643
No 294
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....
Probab=54.27 E-value=8 Score=32.62 Aligned_cols=35 Identities=26% Similarity=0.501 Sum_probs=24.5
Q ss_pred eeeecCCC---CchHHHHHHHHHHhhCCCCeEEEEcCCcce
Q 009774 174 VPIIENTA---YENELTDSLAKAIDAYPKATAVLVRNHGIY 211 (526)
Q Consensus 174 vpv~~~~~---~~~~la~~i~~~l~~~~~~~~vll~nHG~~ 211 (526)
||+|+... ...++++.|.+++.+. -.+.|.|||+=
T Consensus 1 iPvIDls~~~~~~~~~~~~l~~A~~~~---GFf~l~nhGi~ 38 (116)
T PF14226_consen 1 IPVIDLSPDPADREEVAEQLRDACEEW---GFFYLVNHGIP 38 (116)
T ss_dssp --EEEHGGCHHHHHHHHHHHHHHHHHT---SEEEEESSSSS
T ss_pred CCeEECCCCCccHHHHHHHHHHHHHhC---CEEEEeccccc
Confidence 56776652 3456778888888874 78999999964
No 295
>PF13580 SIS_2: SIS domain; PDB: 1TK9_C 2I22_B 2I2W_A 1X92_A 3BJZ_D 2XBL_B 2X3Y_F 2YVA_B 3CVJ_D 3TRJ_D ....
Probab=52.81 E-value=1.6e+02 Score=25.73 Aligned_cols=98 Identities=13% Similarity=0.194 Sum_probs=51.5
Q ss_pred CHHHHHHHHHHCCCeEEEEeCchHHHH-HHHHhhc-CCCCcccccceEE--eC-C-----cCCCCCHHHHHHHHHHcCCC
Q 009774 406 DVPEALEKWHSLGTKVYIYSSGSRLAQ-RLIFGNS-NYGDLRKYLSGFF--DT-A-----VGNKRETPSYVEITNSLGVD 475 (526)
Q Consensus 406 gv~~~L~~L~~~G~~l~vvTn~~~~~~-~~~l~~l-~~~gl~~~fd~i~--~~-~-----~~~KP~p~~~~~~~~~l~~~ 475 (526)
.+.+++....++|-++.++-|+..... .....++ ...++.......+ .. . ...-.++.....++..+++.
T Consensus 23 ~aa~~i~~~~~~gg~i~~~G~G~S~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (138)
T PF13580_consen 23 KAADLIAEALRNGGRIFVCGNGHSAAIASHFAADLGGLFGVNRILLPAIALNDDALTAISNDLEYDEGFARQLLALYDIR 102 (138)
T ss_dssp HHHHHHHHHHHTT--EEEEESTHHHHHHHHHHHHHHCHSSSTSSS-SEEETTSTHHHHHHHHTTGGGTHHHHHHHHTT--
T ss_pred HHHHHHHHHHHCCCEEEEEcCchhhhHHHHHHHHHhcCcCCCcccccccccccchHhhhhcccchhhHHHHHHHHHcCCC
Confidence 344566666667889999999987532 2222222 1113333322222 11 0 01122345556677788887
Q ss_pred CCCcEEEE----ecCHh---hHHHHHHcCCcEEEEe
Q 009774 476 KPSEILFV----TDVYQ---EATAAKAAGLEVVISI 504 (526)
Q Consensus 476 ~p~~~l~V----gDs~~---Di~~A~~aG~~~i~v~ 504 (526)
|.+++++ |.+++ -++.|++.||.+|.++
T Consensus 103 -~gDvli~iS~SG~s~~vi~a~~~Ak~~G~~vIalT 137 (138)
T PF13580_consen 103 -PGDVLIVISNSGNSPNVIEAAEEAKERGMKVIALT 137 (138)
T ss_dssp -TT-EEEEEESSS-SHHHHHHHHHHHHTT-EEEEEE
T ss_pred -CCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 9999988 56664 5567788899999875
No 296
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=49.72 E-value=14 Score=34.11 Aligned_cols=87 Identities=18% Similarity=0.172 Sum_probs=47.6
Q ss_pred CHHHHHHHHHHCCCeEEEEeCchHHH-HHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEe
Q 009774 406 DVPEALEKWHSLGTKVYIYSSGSRLA-QRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVT 484 (526)
Q Consensus 406 gv~~~L~~L~~~G~~l~vvTn~~~~~-~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~Vg 484 (526)
++.+.|..++..+-++++++..+.-. ...+.+.+ |+. +..+. ...+-+-+....-+..-|++ ++||
T Consensus 65 Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll---~~~--i~~~~---~~~~~e~~~~i~~~~~~G~~-----viVG 131 (176)
T PF06506_consen 65 DILRALAKAKKYGPKIAVVGYPNIIPGLESIEELL---GVD--IKIYP---YDSEEEIEAAIKQAKAEGVD-----VIVG 131 (176)
T ss_dssp HHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHH---T-E--EEEEE---ESSHHHHHHHHHHHHHTT-------EEEE
T ss_pred HHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHh---CCc--eEEEE---ECCHHHHHHHHHHHHHcCCc-----EEEC
Confidence 34455555556688999999877654 34444444 331 11111 11111222233333445666 8899
Q ss_pred cCHhhHHHHHHcCCcEEEEeCC
Q 009774 485 DVYQEATAAKAAGLEVVISIRP 506 (526)
Q Consensus 485 Ds~~Di~~A~~aG~~~i~v~~~ 506 (526)
+... ...|++.|+.++.+..+
T Consensus 132 g~~~-~~~A~~~gl~~v~i~sg 152 (176)
T PF06506_consen 132 GGVV-CRLARKLGLPGVLIESG 152 (176)
T ss_dssp SHHH-HHHHHHTTSEEEESS--
T ss_pred CHHH-HHHHHHcCCcEEEEEec
Confidence 9864 78899999999988654
No 297
>KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only]
Probab=49.64 E-value=71 Score=33.06 Aligned_cols=82 Identities=12% Similarity=0.075 Sum_probs=58.1
Q ss_pred CCeEEEEeCchHHHHHHHHhhcCCCCcccccc--eEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHH
Q 009774 418 GTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLS--GFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKA 495 (526)
Q Consensus 418 G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd--~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~ 495 (526)
++--++||+..-...-.++--. ||...|. .|++....+| ...|.++.+++|-+ -.-+.|||......+|++
T Consensus 370 ncvnVlvTttqLipalaKvLL~---gLg~~fpiENIYSa~kiGK--escFerI~~RFg~K--~~yvvIgdG~eee~aAK~ 442 (468)
T KOG3107|consen 370 NCVNVLVTTTQLIPALAKVLLY---GLGSSFPIENIYSATKIGK--ESCFERIQSRFGRK--VVYVVIGDGVEEEQAAKA 442 (468)
T ss_pred ceeEEEEeccchhHHHHHHHHH---hcCCcccchhhhhhhhccH--HHHHHHHHHHhCCc--eEEEEecCcHHHHHHHHh
Confidence 5667888888765544444444 4444333 4444444444 57899999999984 567788999999999999
Q ss_pred cCCcEEEEeCC
Q 009774 496 AGLEVVISIRP 506 (526)
Q Consensus 496 aG~~~i~v~~~ 506 (526)
..|.+.-++..
T Consensus 443 ln~PfwrI~~h 453 (468)
T KOG3107|consen 443 LNMPFWRISSH 453 (468)
T ss_pred hCCceEeeccC
Confidence 99999877654
No 298
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=48.51 E-value=18 Score=37.19 Aligned_cols=21 Identities=10% Similarity=-0.132 Sum_probs=17.5
Q ss_pred CCCCCceEEEEeccccccccc
Q 009774 279 GSGLFPRCIVLDIEGTTTPIS 299 (526)
Q Consensus 279 ~~~~~ikaVlFD~DGTL~d~~ 299 (526)
-.+..|++|=||||.||+...
T Consensus 7 l~l~~i~~~GFDmDyTLa~Y~ 27 (343)
T TIGR02244 7 LNLEKIQVFGFDMDYTLAQYK 27 (343)
T ss_pred cccccCCEEEECccccccccC
Confidence 355689999999999998754
No 299
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=47.90 E-value=32 Score=39.03 Aligned_cols=53 Identities=17% Similarity=0.254 Sum_probs=48.3
Q ss_pred CCCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCC
Q 009774 198 PKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHG 250 (526)
Q Consensus 198 ~~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~ 250 (526)
|..+++|+.+-|++.+|+|..+|--..+..+++++....+.++|.-.+++..+
T Consensus 337 ~~p~~~~~~~~g~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (676)
T TIGR02632 337 PNPRVLLIPGVGMISFGKDKETARVAREFYVNAINVMRGAEAVSEYVSLPEQE 389 (676)
T ss_pred CCCeEEEEcCcceEEecCCHHHhhhhHHHHHHHHHHHhhhhcccceecCchhh
Confidence 34589999999999999999999999999999999999999999988887664
No 300
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=47.46 E-value=64 Score=35.35 Aligned_cols=87 Identities=17% Similarity=0.138 Sum_probs=53.5
Q ss_pred CHHHHHHHHHHCCCeEEEEeCchHHH-HHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEe
Q 009774 406 DVPEALEKWHSLGTKVYIYSSGSRLA-QRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVT 484 (526)
Q Consensus 406 gv~~~L~~L~~~G~~l~vvTn~~~~~-~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~Vg 484 (526)
++...|...+..+-+++|++-.+... .+.+.+.+ ++. ++.+. ....-+.+.-.+-+++.|++ ++||
T Consensus 85 Dil~al~~a~~~~~~ia~vg~~~~~~~~~~~~~ll---~~~--i~~~~---~~~~~e~~~~~~~l~~~G~~-----~viG 151 (526)
T TIGR02329 85 DVMQALARARRIASSIGVVTHQDTPPALRRFQAAF---NLD--IVQRS---YVTEEDARSCVNDLRARGIG-----AVVG 151 (526)
T ss_pred hHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHh---CCc--eEEEE---ecCHHHHHHHHHHHHHCCCC-----EEEC
Confidence 46666666677677899999876544 33333333 332 22221 11112233344455666776 7889
Q ss_pred cCHhhHHHHHHcCCcEEEEeCC
Q 009774 485 DVYQEATAAKAAGLEVVISIRP 506 (526)
Q Consensus 485 Ds~~Di~~A~~aG~~~i~v~~~ 506 (526)
|... ...|+++||.+|.+..+
T Consensus 152 ~~~~-~~~A~~~gl~~ili~s~ 172 (526)
T TIGR02329 152 AGLI-TDLAEQAGLHGVFLYSA 172 (526)
T ss_pred ChHH-HHHHHHcCCceEEEecH
Confidence 9864 67899999999999764
No 301
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=47.35 E-value=1.3e+02 Score=31.63 Aligned_cols=99 Identities=17% Similarity=0.142 Sum_probs=67.1
Q ss_pred ccCCCHHHHHHHHHHC-CCeEEEE-eCc-hHHHHHHHHhhcCCCCcccccceEE-eCCcCCCCCHHHHHHHHHHcCCCCC
Q 009774 402 EVFDDVPEALEKWHSL-GTKVYIY-SSG-SRLAQRLIFGNSNYGDLRKYLSGFF-DTAVGNKRETPSYVEITNSLGVDKP 477 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~-G~~l~vv-Tn~-~~~~~~~~l~~l~~~gl~~~fd~i~-~~~~~~KP~p~~~~~~~~~l~~~~p 477 (526)
...+|+.+-|+....+ +++++.- |-. +......-++++ =.+-||.|+ |+.+..|-+...|..+.+--+.-.|
T Consensus 139 TFRagAfDQLkqnA~k~~iP~ygsyte~dpv~ia~egv~~f----Kke~fdvIIvDTSGRh~qe~sLfeEM~~v~~ai~P 214 (483)
T KOG0780|consen 139 TFRAGAFDQLKQNATKARVPFYGSYTEADPVKIASEGVDRF----KKENFDVIIVDTSGRHKQEASLFEEMKQVSKAIKP 214 (483)
T ss_pred ccccchHHHHHHHhHhhCCeeEecccccchHHHHHHHHHHH----HhcCCcEEEEeCCCchhhhHHHHHHHHHHHhhcCC
Confidence 4668999999887654 6666552 222 222333344554 235689888 8899999999999999887764349
Q ss_pred CcEEEEecCHhhHHHHH-------HcCCcEEEEe
Q 009774 478 SEILFVTDVYQEATAAK-------AAGLEVVISI 504 (526)
Q Consensus 478 ~~~l~VgDs~~Di~~A~-------~aG~~~i~v~ 504 (526)
++++||=|+-.+-.+.. .+++.++.++
T Consensus 215 d~vi~VmDasiGQaae~Qa~aFk~~vdvg~vIlT 248 (483)
T KOG0780|consen 215 DEIIFVMDASIGQAAEAQARAFKETVDVGAVILT 248 (483)
T ss_pred CeEEEEEeccccHhHHHHHHHHHHhhccceEEEE
Confidence 99999998875544432 2466666665
No 302
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=47.06 E-value=11 Score=34.37 Aligned_cols=15 Identities=27% Similarity=0.481 Sum_probs=13.3
Q ss_pred eEEEEeccccccccc
Q 009774 285 RCIVLDIEGTTTPIS 299 (526)
Q Consensus 285 kaVlFD~DGTL~d~~ 299 (526)
+++++|+|+||+.+.
T Consensus 2 ~~lvlDLDeTLi~~~ 16 (162)
T TIGR02251 2 KTLVLDLDETLVHST 16 (162)
T ss_pred cEEEEcCCCCcCCCC
Confidence 579999999999875
No 303
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=46.90 E-value=76 Score=36.41 Aligned_cols=94 Identities=19% Similarity=0.120 Sum_probs=60.9
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccc-eEE-eCCcCCCCCHHHHHHHHHHcCC-----
Q 009774 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLS-GFF-DTAVGNKRETPSYVEITNSLGV----- 474 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd-~i~-~~~~~~KP~p~~~~~~~~~l~~----- 474 (526)
+..||+++.++.++..|+.+-.+|+.+...++.+.... |+...=+ ... +....++-..+-..+++.++.+
T Consensus 647 PvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eC---GILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlARSS 723 (1034)
T KOG0204|consen 647 PVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIAREC---GILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLARSS 723 (1034)
T ss_pred CCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHc---ccccCCCccceecchhhhhcCHHHHHhhhhhheeeecCC
Confidence 57899999999999999999999999999999998888 5543222 111 1110111111112222222211
Q ss_pred ------------CCCCcEEEE-ecCHhhHHHHHHcCCc
Q 009774 475 ------------DKPSEILFV-TDVYQEATAAKAAGLE 499 (526)
Q Consensus 475 ------------~~p~~~l~V-gDs~~Di~~A~~aG~~ 499 (526)
+ -.+++.| ||..+|-.+-++|.+-
T Consensus 724 P~DK~lLVk~L~~-~g~VVAVTGDGTNDaPALkeADVG 760 (1034)
T KOG0204|consen 724 PNDKHLLVKGLIK-QGEVVAVTGDGTNDAPALKEADVG 760 (1034)
T ss_pred CchHHHHHHHHHh-cCcEEEEecCCCCCchhhhhcccc
Confidence 2 3455555 9999999999998774
No 304
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=46.89 E-value=44 Score=38.10 Aligned_cols=41 Identities=7% Similarity=0.130 Sum_probs=34.2
Q ss_pred ccCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhc
Q 009774 399 LEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNS 439 (526)
Q Consensus 399 ~~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l 439 (526)
..+++-|++.++++.|++.+.+++.+|+.+.-.+....+.+
T Consensus 672 f~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v 712 (1160)
T KOG0209|consen 672 FSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEV 712 (1160)
T ss_pred EeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehhee
Confidence 34678999999999999999999999998876666555555
No 305
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=46.43 E-value=11 Score=35.56 Aligned_cols=18 Identities=28% Similarity=0.115 Sum_probs=15.0
Q ss_pred CCceEEEEeccccccccc
Q 009774 282 LFPRCIVLDIEGTTTPIS 299 (526)
Q Consensus 282 ~~ikaVlFD~DGTL~d~~ 299 (526)
..-|+++.|||+||+|..
T Consensus 19 ~~kklLVLDLDeTLvh~~ 36 (195)
T TIGR02245 19 EGKKLLVLDIDYTLFDHR 36 (195)
T ss_pred CCCcEEEEeCCCceEccc
Confidence 345899999999999863
No 306
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=45.50 E-value=11 Score=33.49 Aligned_cols=15 Identities=27% Similarity=0.481 Sum_probs=13.1
Q ss_pred eEEEEeccccccccc
Q 009774 285 RCIVLDIEGTTTPIS 299 (526)
Q Consensus 285 kaVlFD~DGTL~d~~ 299 (526)
+.+++|+||||+++.
T Consensus 3 ~~lvldld~tl~~~~ 17 (148)
T smart00577 3 KTLVLDLDETLVHST 17 (148)
T ss_pred cEEEEeCCCCeECCC
Confidence 578999999999874
No 307
>COG2022 ThiG Uncharacterized enzyme of thiazole biosynthesis [Nucleotide transport and metabolism]
Probab=45.46 E-value=2.1e+02 Score=27.72 Aligned_cols=94 Identities=15% Similarity=0.076 Sum_probs=67.2
Q ss_pred ccCCCHHHHHHHHH---HCCCeEEEEeCchHHHHHHHHhhcCCCCcc---cccceEEeCCcCCCCCHHHHHHHHHHcCCC
Q 009774 402 EVFDDVPEALEKWH---SLGTKVYIYSSGSRLAQRLIFGNSNYGDLR---KYLSGFFDTAVGNKRETPSYVEITNSLGVD 475 (526)
Q Consensus 402 ~l~pgv~~~L~~L~---~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~---~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~ 475 (526)
.|+|+..++|+..+ +.|+.+--.||.+.-..++..+. |-. ++-.-|- .+.+--.|..++-++++.++.
T Consensus 111 tLlPD~~etl~Aae~Lv~eGF~VlPY~~dD~v~arrLee~----GcaavMPl~aPIG--Sg~G~~n~~~l~iiie~a~VP 184 (262)
T COG2022 111 TLLPDPIETLKAAEQLVKEGFVVLPYTTDDPVLARRLEEA----GCAAVMPLGAPIG--SGLGLQNPYNLEIIIEEADVP 184 (262)
T ss_pred ccCCChHHHHHHHHHHHhCCCEEeeccCCCHHHHHHHHhc----CceEecccccccc--CCcCcCCHHHHHHHHHhCCCC
Confidence 58899988887654 67999999999998877755443 321 1111111 223344678888899999887
Q ss_pred CCCcEEEEec---CHhhHHHHHHcCCcEEEEeCC
Q 009774 476 KPSEILFVTD---VYQEATAAKAAGLEVVISIRP 506 (526)
Q Consensus 476 ~p~~~l~VgD---s~~Di~~A~~aG~~~i~v~~~ 506 (526)
+.|+- +++|...|.+.|+..|+++.-
T Consensus 185 -----viVDAGiG~pSdAa~aMElG~DaVL~NTA 213 (262)
T COG2022 185 -----VIVDAGIGTPSDAAQAMELGADAVLLNTA 213 (262)
T ss_pred -----EEEeCCCCChhHHHHHHhcccceeehhhH
Confidence 55653 458999999999999999864
No 308
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=45.40 E-value=47 Score=29.44 Aligned_cols=37 Identities=16% Similarity=-0.024 Sum_probs=27.9
Q ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCc--hHHHHHHHHhh
Q 009774 401 GEVFDDVPEALEKWHSLGTKVYIYSSG--SRLAQRLIFGN 438 (526)
Q Consensus 401 ~~l~pgv~~~L~~L~~~G~~l~vvTn~--~~~~~~~~l~~ 438 (526)
....|++.+++++|-+. |.++|+|.. .....+.+.+.
T Consensus 67 L~V~p~aq~v~keLt~~-y~vYivtaamdhp~s~~dK~eW 105 (180)
T COG4502 67 LGVQPFAQTVLKELTSI-YNVYIVTAAMDHPKSCEDKGEW 105 (180)
T ss_pred cCccccHHHHHHHHHhh-heEEEEEeccCCchhHHHHHHH
Confidence 45779999999999987 999999988 34444444443
No 309
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=43.66 E-value=78 Score=34.81 Aligned_cols=86 Identities=14% Similarity=0.144 Sum_probs=53.4
Q ss_pred CHHHHHHHHHHCCCeEEEEeCchHHH-HHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEe
Q 009774 406 DVPEALEKWHSLGTKVYIYSSGSRLA-QRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVT 484 (526)
Q Consensus 406 gv~~~L~~L~~~G~~l~vvTn~~~~~-~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~Vg 484 (526)
++...|...++.+-+++|++-.+... .+.+.+.+ ++. ++.+. ....-+.+.-..-+++.|++ ++||
T Consensus 95 Dil~al~~a~~~~~~iavv~~~~~~~~~~~~~~~l---~~~--i~~~~---~~~~~e~~~~v~~lk~~G~~-----~vvG 161 (538)
T PRK15424 95 DVMQALARARKLTSSIGVVTYQETIPALVAFQKTF---NLR--IEQRS---YVTEEDARGQINELKANGIE-----AVVG 161 (538)
T ss_pred HHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHh---CCc--eEEEE---ecCHHHHHHHHHHHHHCCCC-----EEEc
Confidence 46666666677777999999876543 33333333 322 11111 11122334445556667777 7889
Q ss_pred cCHhhHHHHHHcCCcEEEEeC
Q 009774 485 DVYQEATAAKAAGLEVVISIR 505 (526)
Q Consensus 485 Ds~~Di~~A~~aG~~~i~v~~ 505 (526)
|... ...|.++|+..+++..
T Consensus 162 ~~~~-~~~A~~~g~~g~~~~s 181 (538)
T PRK15424 162 AGLI-TDLAEEAGMTGIFIYS 181 (538)
T ss_pred CchH-HHHHHHhCCceEEecC
Confidence 9775 7789999999998874
No 310
>COG1015 DeoB Phosphopentomutase [Carbohydrate transport and metabolism]
Probab=43.14 E-value=1.2e+02 Score=31.32 Aligned_cols=86 Identities=15% Similarity=0.287 Sum_probs=59.1
Q ss_pred cCCCHHHHHHHHHHCCCeEEEE-----------------eCchHHHHHHHHhhcCCCCcc-cccceEE--eCCcCCCCCH
Q 009774 403 VFDDVPEALEKWHSLGTKVYIY-----------------SSGSRLAQRLIFGNSNYGDLR-KYLSGFF--DTAVGNKRET 462 (526)
Q Consensus 403 l~pgv~~~L~~L~~~G~~l~vv-----------------Tn~~~~~~~~~l~~l~~~gl~-~~fd~i~--~~~~~~KP~p 462 (526)
+-|....+|++|++.|.+++.| +.++.+.++..++.+...+.. -.|..++ |...+.+-|+
T Consensus 222 ~~P~~~tvl~~L~e~g~~vi~IGKI~DI~~~~Git~~~~~~~n~~~~d~tl~~~~~~~~~~~vFtNlVdfD~~yGHRrDv 301 (397)
T COG1015 222 VKPFAPTVLDKLKEAGRPVIAIGKIADIYAGQGITEKVKAVSNMDGMDVTLEEMKTAEFNGLVFTNLVDFDSLYGHRRDV 301 (397)
T ss_pred cCCChhhHHHHHHHcCCceEEEeeHHhhhccccccccccCCCcHHHHHHHHHHHhcCCCCcEEEEeeeecccccccccch
Confidence 5577789999999999887765 345566777777776321211 1233444 4567789999
Q ss_pred HHHHHHHHHcC---------CCCCCcEEEEe-cCHhh
Q 009774 463 PSYVEITNSLG---------VDKPSEILFVT-DVYQE 489 (526)
Q Consensus 463 ~~~~~~~~~l~---------~~~p~~~l~Vg-Ds~~D 489 (526)
.-|-.+++.++ ++ ++++|+|- |+-+|
T Consensus 302 ~gYa~aLe~FD~rL~e~~~~l~-edDlLiiTADHGnD 337 (397)
T COG1015 302 AGYAAALEEFDRRLPELIENLR-EDDLLIITADHGND 337 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC-CCCEEEEecCCCCC
Confidence 99999998774 65 88999884 65444
No 311
>PLN02334 ribulose-phosphate 3-epimerase
Probab=42.29 E-value=2.8e+02 Score=26.54 Aligned_cols=98 Identities=10% Similarity=-0.068 Sum_probs=57.5
Q ss_pred CCHHHHHHHHHHCCCeEEEEeCc--hHHHHHHHHhhcCCCCcccccce--EEeCCcCCCCCHHHHHHHHHHcCCCCCCcE
Q 009774 405 DDVPEALEKWHSLGTKVYIYSSG--SRLAQRLIFGNSNYGDLRKYLSG--FFDTAVGNKRETPSYVEITNSLGVDKPSEI 480 (526)
Q Consensus 405 pgv~~~L~~L~~~G~~l~vvTn~--~~~~~~~~l~~l~~~gl~~~fd~--i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~ 480 (526)
+...+.++.+++.|.++++..|. +.+..+..++.. + .+|+-. ++-.....+..|..+.++-+--...+.-.+
T Consensus 102 d~~~~~~~~i~~~g~~iGls~~~~t~~~~~~~~~~~~---~-~Dyi~~~~v~pg~~~~~~~~~~~~~i~~~~~~~~~~~I 177 (229)
T PLN02334 102 IHLHRLIQQIKSAGMKAGVVLNPGTPVEAVEPVVEKG---L-VDMVLVMSVEPGFGGQSFIPSMMDKVRALRKKYPELDI 177 (229)
T ss_pred hhHHHHHHHHHHCCCeEEEEECCCCCHHHHHHHHhcc---C-CCEEEEEEEecCCCccccCHHHHHHHHHHHHhCCCCcE
Confidence 44578999999999999999984 455444444430 0 122211 111122223345555554433333102245
Q ss_pred EEE-ecCHhhHHHHHHcCCcEEEEeCC
Q 009774 481 LFV-TDVYQEATAAKAAGLEVVISIRP 506 (526)
Q Consensus 481 l~V-gDs~~Di~~A~~aG~~~i~v~~~ 506 (526)
+.+ |=+..++....++|...+.+-+.
T Consensus 178 ~a~GGI~~e~i~~l~~aGad~vvvgsa 204 (229)
T PLN02334 178 EVDGGVGPSTIDKAAEAGANVIVAGSA 204 (229)
T ss_pred EEeCCCCHHHHHHHHHcCCCEEEEChH
Confidence 566 46678999999999999888765
No 312
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=41.77 E-value=38 Score=32.45 Aligned_cols=33 Identities=18% Similarity=0.160 Sum_probs=30.0
Q ss_pred HHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhc
Q 009774 407 VPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNS 439 (526)
Q Consensus 407 v~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l 439 (526)
+.+.+.+|++.|++++.+|++++..+...-+.+
T Consensus 28 A~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l 60 (274)
T COG3769 28 AAPVLLELKDAGVPVILCSSKTRAEMLYLQKSL 60 (274)
T ss_pred cchHHHHHHHcCCeEEEeccchHHHHHHHHHhc
Confidence 558899999999999999999999888888888
No 313
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=41.49 E-value=31 Score=33.01 Aligned_cols=74 Identities=20% Similarity=0.336 Sum_probs=42.6
Q ss_pred EeecCCCCcccchhhHHHHhhccHHHHHHHHHHHHH-HHHHcCCccccCCceEEEeCCCCCCCCccEEEEeccCCCCC--
Q 009774 4 LAVNGGGGAAAATHTQAYLEGRAVKETRVLISELCR-HFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKE-- 80 (526)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~~r-~l~~~gl~~~~~GNiSvR~~~~~~~~~~~~~litpsG~~~~-- 80 (526)
|-+.++|=.|.-.+=.++-........|++++++-+ .+...||.-..||.||+- |+|.|+++.
T Consensus 101 In~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L~~~f~d~~L~~siGGqiSiD--------------vfp~GwDKty~ 166 (220)
T PF03332_consen 101 INFSPIGRNASQEERDEFDEYDKKHKIREKLVEALKKEFPDFGLTFSIGGQISID--------------VFPKGWDKTYC 166 (220)
T ss_dssp EEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHHHHHTCCCSEEEEEETTTEEE--------------EEETT-SGGGG
T ss_pred EEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHHHHHCCCCceEEecCCceEEc--------------cccCCccHHHH
Confidence 445555555444444444333445667887876655 555568888888998872 678887643
Q ss_pred --CCCC---CCEEEEe
Q 009774 81 --RMEP---EDMYVLS 91 (526)
Q Consensus 81 --~l~~---~div~vd 91 (526)
.|.. ++|.-+.
T Consensus 167 Lr~l~~~~~~~I~FfG 182 (220)
T PF03332_consen 167 LRHLEDEGFDEIHFFG 182 (220)
T ss_dssp GGGTTTTT-SEEEEEE
T ss_pred HHHHHhcccceEEEEe
Confidence 4544 4555553
No 314
>PRK00994 F420-dependent methylenetetrahydromethanopterin dehydrogenase; Provisional
Probab=38.58 E-value=3.2e+02 Score=26.63 Aligned_cols=89 Identities=13% Similarity=0.137 Sum_probs=57.1
Q ss_pred HHHHHHC-CCeEEEEeCchH---HHHHHHHhhc-CCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEec
Q 009774 411 LEKWHSL-GTKVYIYSSGSR---LAQRLIFGNS-NYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTD 485 (526)
Q Consensus 411 L~~L~~~-G~~l~vvTn~~~---~~~~~~l~~l-~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgD 485 (526)
|+...++ ++.+-+++++.. +......... . .+.+.|-.+ -+-...-|-|.--+.+++..|+. |+.|||
T Consensus 23 lDErAdRedI~vrv~gsGaKm~pe~~~~~~~~~~~--~~~pDf~i~-isPN~a~PGP~~ARE~l~~~~iP----~IvI~D 95 (277)
T PRK00994 23 LDERADREDIDVRVVGSGAKMGPEEVEEVVKKMLE--EWKPDFVIV-ISPNPAAPGPKKAREILKAAGIP----CIVIGD 95 (277)
T ss_pred HHhhhcccCceEEEeccCCCCCHHHHHHHHHHHHH--hhCCCEEEE-ECCCCCCCCchHHHHHHHhcCCC----EEEEcC
Confidence 4444444 899999999852 2222222211 0 222323222 33344567778888999999996 999999
Q ss_pred CH--hhHHHHHHcCCcEEEEeCC
Q 009774 486 VY--QEATAAKAAGLEVVISIRP 506 (526)
Q Consensus 486 s~--~Di~~A~~aG~~~i~v~~~ 506 (526)
.+ .+...-.+.|+-.|.+...
T Consensus 96 ~p~~K~~d~l~~~g~GYIivk~D 118 (277)
T PRK00994 96 APGKKVKDAMEEQGLGYIIVKAD 118 (277)
T ss_pred CCccchHHHHHhcCCcEEEEecC
Confidence 99 4667788889988888754
No 315
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=38.13 E-value=60 Score=37.40 Aligned_cols=46 Identities=15% Similarity=0.224 Sum_probs=37.8
Q ss_pred cCCCCCHHHHHHHHHHcCCCCCCcEEEEecCH-hhHHHHHHcCCcEEEEe
Q 009774 456 VGNKRETPSYVEITNSLGVDKPSEILFVTDVY-QEATAAKAAGLEVVISI 504 (526)
Q Consensus 456 ~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~-~Di~~A~~aG~~~i~v~ 504 (526)
...||+...-.+.|+++|++ -+++-||+. .--..|++.|+..|+..
T Consensus 722 D~vr~~a~~av~~Lk~~Gi~---v~mLTGDn~~aA~svA~~VGi~~V~ae 768 (951)
T KOG0207|consen 722 DQVRPDAALAVAELKSMGIK---VVMLTGDNDAAARSVAQQVGIDNVYAE 768 (951)
T ss_pred cccchhHHHHHHHHHhcCce---EEEEcCCCHHHHHHHHHhhCcceEEec
Confidence 45688888888899999997 677779998 68888999998888764
No 316
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=37.21 E-value=27 Score=36.62 Aligned_cols=17 Identities=35% Similarity=0.448 Sum_probs=14.6
Q ss_pred CceEEEEeccccccccc
Q 009774 283 FPRCIVLDIEGTTTPIS 299 (526)
Q Consensus 283 ~ikaVlFD~DGTL~d~~ 299 (526)
..+.|+||||||++-+.
T Consensus 374 n~kiVVsDiDGTITkSD 390 (580)
T COG5083 374 NKKIVVSDIDGTITKSD 390 (580)
T ss_pred CCcEEEEecCCcEEehh
Confidence 57899999999998654
No 317
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=36.96 E-value=59 Score=31.17 Aligned_cols=42 Identities=17% Similarity=0.177 Sum_probs=30.2
Q ss_pred HHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE
Q 009774 407 VPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF 452 (526)
Q Consensus 407 v~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~ 452 (526)
+.++|++|+++ +.++|||++.-..+..-+... .+...||.++
T Consensus 1 M~~~L~~L~~~-~~vgvVgGsd~~k~~eQl~~~---~~~~~fdy~f 42 (220)
T PF03332_consen 1 MAELLQKLRKK-VPVGVVGGSDLPKIQEQLGGD---DVLDNFDYVF 42 (220)
T ss_dssp HHHHHHHHHTT-SEEEEEESS-HHHHHHHHSTT---THHHH-SEEE
T ss_pred CHHHHHHHHhc-CeEEEEcchhHHHHHHHHccc---chHhhCCeee
Confidence 46899999985 999999999987655555312 4667889888
No 318
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=35.75 E-value=39 Score=23.60 Aligned_cols=24 Identities=21% Similarity=0.313 Sum_probs=17.5
Q ss_pred EEEEcCC-cceeecCCHHHHHHHHH
Q 009774 202 AVLVRNH-GIYVWGDSWINAKTQAE 225 (526)
Q Consensus 202 ~vll~nH-G~~~~G~sl~eA~~~~~ 225 (526)
.+-...- |+++.|+|++||+..+.
T Consensus 15 ~~~~pdlpg~~t~G~t~eea~~~~~ 39 (48)
T PF03681_consen 15 VAYFPDLPGCFTQGDTLEEALENAK 39 (48)
T ss_dssp EEEETTCCTCEEEESSHHHHHHHHH
T ss_pred EEEeCCccChhhcCCCHHHHHHHHH
Confidence 3344444 99999999999995543
No 319
>COG3347 Uncharacterized conserved protein [Function unknown]
Probab=34.10 E-value=77 Score=32.83 Aligned_cols=53 Identities=15% Similarity=0.159 Sum_probs=47.9
Q ss_pred CCeEEEEcCCcceeecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCc
Q 009774 199 KATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGP 251 (526)
Q Consensus 199 ~~~~vll~nHG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~ 251 (526)
-.+++|+..-|+++.|+|...|-..-+.++.+..+.=.|.++|.-.+++..+.
T Consensus 337 ~P~viLipG~Gm~~~g~~~a~A~i~~d~~~~ai~v~~gA~~~g~~~~l~e~e~ 389 (404)
T COG3347 337 APRVILIPGLGMLTAGKSAAGARIMGDLYEDAIAVVRGAEALGYYTPLSEAEL 389 (404)
T ss_pred CCcEEEecCCceeeeccchhhHHHHHHHHHHHHHHhhhhhhhcccccCchhhh
Confidence 35899999999999999999999999999999999999999999888876643
No 320
>cd00733 GlyRS_alpha_core Class II Glycyl-tRNA synthetase (GlyRS) alpha subunit core catalytic domain. GlyRS functions as a homodimer in eukaryotes, archaea and some bacteria and as a heterotetramer in the remainder of prokaryotes and in arabidopsis. It is responsible for the attachment of glycine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for the ATP-dependent formation of the enzyme bound aminoacyl-adenylate. This alignment contains only sequences from the GlyRS form which heterotetramerizes. The homodimer form of GlyRS is in a different family of class II aaRS. Class II assignment is based upon structure and the presence of three characteristic sequence motifs.
Probab=32.98 E-value=39 Score=32.85 Aligned_cols=43 Identities=30% Similarity=0.434 Sum_probs=34.9
Q ss_pred CCCCH----HHHHHHHHHcCCCC-CCcEEEEecCH-hhHHHHHHcCCcE
Q 009774 458 NKRET----PSYVEITNSLGVDK-PSEILFVTDVY-QEATAAKAAGLEV 500 (526)
Q Consensus 458 ~KP~p----~~~~~~~~~l~~~~-p~~~l~VgDs~-~Di~~A~~aG~~~ 500 (526)
.||.| +.|+.-++.+|+++ ..++-||+|.. +-..+|...|+.+
T Consensus 80 iKPsP~niQelYL~SL~~lGid~~~hDIRFVEDnWEsPTLGAwGLGWEV 128 (279)
T cd00733 80 IKPSPDNIQELYLESLEALGINPKEHDIRFVEDNWESPTLGAWGLGWEV 128 (279)
T ss_pred ECCCCccHHHHHHHHHHHhCCCccccCeeEeecCCCCCcccccccccEE
Confidence 37776 56777899999972 47899999998 8899999888764
No 321
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=32.94 E-value=20 Score=34.59 Aligned_cols=10 Identities=50% Similarity=0.893 Sum_probs=0.0
Q ss_pred EEeccccccc
Q 009774 288 VLDIEGTTTP 297 (526)
Q Consensus 288 lFD~DGTL~d 297 (526)
+||+||||.+
T Consensus 1 ~lDyDGTL~p 10 (235)
T PF02358_consen 1 FLDYDGTLAP 10 (235)
T ss_dssp EEE-TTTSS-
T ss_pred CcccCCccCC
No 322
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=32.90 E-value=2.8e+02 Score=27.50 Aligned_cols=16 Identities=31% Similarity=0.856 Sum_probs=13.9
Q ss_pred ceEEEEeccccccccc
Q 009774 284 PRCIVLDIEGTTTPIS 299 (526)
Q Consensus 284 ikaVlFD~DGTL~d~~ 299 (526)
.++++||+||||.+..
T Consensus 158 ~~~~~~D~dgtl~~~~ 173 (300)
T PHA02530 158 PKAVIFDIDGTLAKMG 173 (300)
T ss_pred CCEEEEECCCcCcCCC
Confidence 4799999999999864
No 323
>PRK13762 tRNA-modifying enzyme; Provisional
Probab=32.54 E-value=48 Score=33.86 Aligned_cols=29 Identities=24% Similarity=0.626 Sum_probs=25.9
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHH
Q 009774 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRL 430 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~ 430 (526)
-++|.+.++++.++++|+.+.|.||+...
T Consensus 142 lL~p~l~eli~~~k~~Gi~~~L~TNG~~~ 170 (322)
T PRK13762 142 TLYPYLPELIEEFHKRGFTTFLVTNGTRP 170 (322)
T ss_pred cchhhHHHHHHHHHHcCCCEEEECCCCCH
Confidence 36789999999999999999999999653
No 324
>PRK13125 trpA tryptophan synthase subunit alpha; Provisional
Probab=32.33 E-value=3.9e+02 Score=25.89 Aligned_cols=94 Identities=19% Similarity=0.089 Sum_probs=55.5
Q ss_pred CCHHHHHHHHHHCCCeEEEEeCchH--HHHHHHHhhcCCCCcccccceEE-eCCcCCCCCHHHHHHHHHHcCCCCCCcEE
Q 009774 405 DDVPEALEKWHSLGTKVYIYSSGSR--LAQRLIFGNSNYGDLRKYLSGFF-DTAVGNKRETPSYVEITNSLGVDKPSEIL 481 (526)
Q Consensus 405 pgv~~~L~~L~~~G~~l~vvTn~~~--~~~~~~l~~l~~~gl~~~fd~i~-~~~~~~KP~p~~~~~~~~~l~~~~p~~~l 481 (526)
+...++++.++++|.+.+++-|... +..+.+++.. +.|-.+. ....+.+=.+....++-+--.+. ++..+
T Consensus 116 ~~~~~~~~~~~~~Gl~~~~~v~p~T~~e~l~~~~~~~------~~~l~msv~~~~g~~~~~~~~~~i~~lr~~~-~~~~i 188 (244)
T PRK13125 116 DDLEKYVEIIKNKGLKPVFFTSPKFPDLLIHRLSKLS------PLFIYYGLRPATGVPLPVSVERNIKRVRNLV-GNKYL 188 (244)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHhC------CCEEEEEeCCCCCCCchHHHHHHHHHHHHhc-CCCCE
Confidence 4677899999999999999888743 4455555544 2222111 11112232233232322222233 33457
Q ss_pred EEecC---HhhHHHHHHcCCcEEEEeC
Q 009774 482 FVTDV---YQEATAAKAAGLEVVISIR 505 (526)
Q Consensus 482 ~VgDs---~~Di~~A~~aG~~~i~v~~ 505 (526)
.||=. ..++..+.++|...+.+-+
T Consensus 189 ~v~gGI~~~e~i~~~~~~gaD~vvvGS 215 (244)
T PRK13125 189 VVGFGLDSPEDARDALSAGADGVVVGT 215 (244)
T ss_pred EEeCCcCCHHHHHHHHHcCCCEEEECH
Confidence 78754 4789988999999888754
No 325
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=31.31 E-value=4.3e+02 Score=28.22 Aligned_cols=97 Identities=18% Similarity=0.141 Sum_probs=56.1
Q ss_pred CCHHHHHHHHHHC-CCeEEEEeCc--hHHHHHHHHhhcCCCCcccccceEE-eCCcCCCCCHHHHHHHHHHcCCCCCCcE
Q 009774 405 DDVPEALEKWHSL-GTKVYIYSSG--SRLAQRLIFGNSNYGDLRKYLSGFF-DTAVGNKRETPSYVEITNSLGVDKPSEI 480 (526)
Q Consensus 405 pgv~~~L~~L~~~-G~~l~vvTn~--~~~~~~~~l~~l~~~gl~~~fd~i~-~~~~~~KP~p~~~~~~~~~l~~~~p~~~ 480 (526)
+++.+-|+.+.++ |+++....+. +.......++.+ . ...+|.++ |+.+....+......+.+-.....|.++
T Consensus 141 ~aA~eQLk~~a~~~~vp~~~~~~~~dp~~i~~~~l~~~---~-~~~~DvViIDTaGr~~~d~~lm~El~~i~~~~~p~e~ 216 (429)
T TIGR01425 141 AGAFDQLKQNATKARIPFYGSYTESDPVKIASEGVEKF---K-KENFDIIIVDTSGRHKQEDSLFEEMLQVAEAIQPDNI 216 (429)
T ss_pred hhHHHHHHHHhhccCCeEEeecCCCCHHHHHHHHHHHH---H-hCCCCEEEEECCCCCcchHHHHHHHHHHhhhcCCcEE
Confidence 4566666554443 5555543321 222223334333 1 12478777 8888888888888777766554338999
Q ss_pred EEEecCHhh---HHHHHH----cCCcEEEEeC
Q 009774 481 LFVTDVYQE---ATAAKA----AGLEVVISIR 505 (526)
Q Consensus 481 l~VgDs~~D---i~~A~~----aG~~~i~v~~ 505 (526)
++|-|+..+ +.-|+. .++..+.++-
T Consensus 217 lLVlda~~Gq~a~~~a~~F~~~~~~~g~IlTK 248 (429)
T TIGR01425 217 IFVMDGSIGQAAEAQAKAFKDSVDVGSVIITK 248 (429)
T ss_pred EEEeccccChhHHHHHHHHHhccCCcEEEEEC
Confidence 999987532 333333 4677776653
No 326
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=31.26 E-value=27 Score=31.54 Aligned_cols=17 Identities=24% Similarity=0.245 Sum_probs=14.4
Q ss_pred ceEEEEecccccccccc
Q 009774 284 PRCIVLDIEGTTTPISF 300 (526)
Q Consensus 284 ikaVlFD~DGTL~d~~~ 300 (526)
-..+++|||.||+++..
T Consensus 6 kl~LVLDLDeTLihs~~ 22 (156)
T TIGR02250 6 KLHLVLDLDQTLIHTTK 22 (156)
T ss_pred ceEEEEeCCCCcccccc
Confidence 45899999999998764
No 327
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=31.08 E-value=3.7e+02 Score=26.57 Aligned_cols=76 Identities=18% Similarity=0.204 Sum_probs=49.5
Q ss_pred CCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecCHhhHHHHHHcC
Q 009774 418 GTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAG 497 (526)
Q Consensus 418 G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs~~Di~~A~~aG 497 (526)
-+.++|+|+++.+...++++...--||. |.-.+...--.|..| ++.++++ ||..-+..|+..|.++|
T Consensus 36 ~VEVVllSRNspdTGlRv~nSI~hygL~-----ItR~~ft~G~~~~~Y---l~af~v~-----LFLSan~~DV~~Ai~~G 102 (264)
T PF06189_consen 36 LVEVVLLSRNSPDTGLRVFNSIRHYGLD-----ITRAAFTGGESPYPY---LKAFNVD-----LFLSANEDDVQEAIDAG 102 (264)
T ss_pred ceEEEEEecCCHHHHHHHHHhHHHhCCc-----ceeeeecCCCCHHHH---HHHhCCc-----eEeeCCHHHHHHHHHcC
Confidence 4678999999988766666544211332 221112222223334 4577887 99999999999999999
Q ss_pred CcEEEEeCC
Q 009774 498 LEVVISIRP 506 (526)
Q Consensus 498 ~~~i~v~~~ 506 (526)
+....+...
T Consensus 103 ~~Aa~v~~~ 111 (264)
T PF06189_consen 103 IPAATVLPS 111 (264)
T ss_pred CCcEEeecC
Confidence 987666543
No 328
>PRK09348 glyQ glycyl-tRNA synthetase subunit alpha; Validated
Probab=31.01 E-value=43 Score=32.61 Aligned_cols=43 Identities=30% Similarity=0.418 Sum_probs=34.8
Q ss_pred CCCCH----HHHHHHHHHcCCCC-CCcEEEEecCH-hhHHHHHHcCCcE
Q 009774 458 NKRET----PSYVEITNSLGVDK-PSEILFVTDVY-QEATAAKAAGLEV 500 (526)
Q Consensus 458 ~KP~p----~~~~~~~~~l~~~~-p~~~l~VgDs~-~Di~~A~~aG~~~ 500 (526)
.||.| +.|+.-++.+|+++ ..++-||+|.. +-..+|...|+.+
T Consensus 84 lKPsP~niQelYL~SL~~lGid~~~hDIRFVEDnWEsPTLGAwGlGWEV 132 (283)
T PRK09348 84 LKPSPDNIQELYLGSLEALGIDPLEHDIRFVEDNWESPTLGAWGLGWEV 132 (283)
T ss_pred EcCCCccHHHHHHHHHHHhCCCccccceeEeecCCCCCcccccccceEE
Confidence 37776 46777899999982 47899999998 8889999888764
No 329
>TIGR00388 glyQ glycyl-tRNA synthetase, tetrameric type, alpha subunit. This tetrameric form of glycyl-tRNA synthetase (2 alpha, 2 beta) is found in the majority of completed eubacterial genomes, with the two genes fused in a few species. A substantially different homodimeric form (not recognized by this model) replaces this form in the Archaea, animals, yeasts, and some eubacteria.
Probab=29.68 E-value=48 Score=32.46 Aligned_cols=43 Identities=30% Similarity=0.446 Sum_probs=34.7
Q ss_pred CCCCH----HHHHHHHHHcCCCC-CCcEEEEecCH-hhHHHHHHcCCcE
Q 009774 458 NKRET----PSYVEITNSLGVDK-PSEILFVTDVY-QEATAAKAAGLEV 500 (526)
Q Consensus 458 ~KP~p----~~~~~~~~~l~~~~-p~~~l~VgDs~-~Di~~A~~aG~~~ 500 (526)
.||.| +.|+.-++.+|+++ ..++-||+|.. +-..+|...|+.+
T Consensus 81 lKPsP~niQelYL~SL~~lGid~~~hDIRFVEDnWEsPTLGAwGlGWEV 129 (293)
T TIGR00388 81 IKPSPDNIQELYLDSLRALGIDPTEHDIRFVEDNWENPTLGAWGLGWEV 129 (293)
T ss_pred ECCCCccHHHHHHHHHHHhCCCccccCeeEeecCCCCCcccccccccEE
Confidence 37777 46777889999972 37899999998 8889999888764
No 330
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=29.49 E-value=5.5e+02 Score=25.15 Aligned_cols=93 Identities=14% Similarity=0.125 Sum_probs=53.4
Q ss_pred cCCCHHHHHHHHHHCCCeEE-EEeCch-HHHHHHHHhhcCCCCcccccceEEeC--CcCC----CCCHHHHHHHHHHcCC
Q 009774 403 VFDDVPEALEKWHSLGTKVY-IYSSGS-RLAQRLIFGNSNYGDLRKYLSGFFDT--AVGN----KRETPSYVEITNSLGV 474 (526)
Q Consensus 403 l~pgv~~~L~~L~~~G~~l~-vvTn~~-~~~~~~~l~~l~~~gl~~~fd~i~~~--~~~~----KP~p~~~~~~~~~l~~ 474 (526)
+++...++++.++++|...+ +++-.+ .+....+++.. +-|..+... ..+. .|...-+.+-++++
T Consensus 125 p~ee~~~~~~~~~~~gl~~i~lv~P~T~~eri~~i~~~~------~gfiy~vs~~G~TG~~~~~~~~~~~~i~~lr~~-- 196 (256)
T TIGR00262 125 PLEESGDLVEAAKKHGVKPIFLVAPNADDERLKQIAEKS------QGFVYLVSRAGVTGARNRAASALNELVKRLKAY-- 196 (256)
T ss_pred ChHHHHHHHHHHHHCCCcEEEEECCCCCHHHHHHHHHhC------CCCEEEEECCCCCCCcccCChhHHHHHHHHHhh--
Confidence 55678899999999998866 444433 34455555544 223333321 1111 12222222222322
Q ss_pred CCCCcEEEEe---cCHhhHHHHHHcCCcEEEEeC
Q 009774 475 DKPSEILFVT---DVYQEATAAKAAGLEVVISIR 505 (526)
Q Consensus 475 ~~p~~~l~Vg---Ds~~Di~~A~~aG~~~i~v~~ 505 (526)
. +.-++|| .++.++..+.++|...+.+-+
T Consensus 197 ~--~~pi~vgfGI~~~e~~~~~~~~GADgvVvGS 228 (256)
T TIGR00262 197 S--AKPVLVGFGISKPEQVKQAIDAGADGVIVGS 228 (256)
T ss_pred c--CCCEEEeCCCCCHHHHHHHHHcCCCEEEECH
Confidence 1 1237777 456799999999999888754
No 331
>TIGR01858 tag_bisphos_ald class II aldolase, tagatose bisphosphate family. This model describes tagatose-1,6-bisphosphate aldolases, and perhaps other closely related class II aldolases. This tetrameric, Zn2+-dependent enzyme is related to the class II fructose bisphosphate aldolase; fructose 1,6-bisphosphate and tagatose 1,6 bisphosphate differ only in chirality at C4.
Probab=29.39 E-value=2.3e+02 Score=28.39 Aligned_cols=93 Identities=6% Similarity=-0.002 Sum_probs=61.6
Q ss_pred HHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeC---CcCCCC---CHHHHHHHHHHcCCCCCCcE
Q 009774 407 VPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDT---AVGNKR---ETPSYVEITNSLGVDKPSEI 480 (526)
Q Consensus 407 v~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~---~~~~KP---~p~~~~~~~~~l~~~~p~~~ 480 (526)
+.++|+..++.||-++-+.-.+.+..+.+++..+..+ -..|+.. ....-+ -..+...++++..++ =+
T Consensus 4 ~k~ll~~A~~~~yAV~AfN~~n~e~~~avi~AAee~~----sPvIlq~s~~~~~~~~~~~~~~~~~~~a~~~~VP---Va 76 (282)
T TIGR01858 4 TKYMLQDAQAGGYAVPAFNIHNLETIQAVVETAAEMR----SPVILAGTPGTFKHAGTEYIVALCSAASTTYNMP---LA 76 (282)
T ss_pred HHHHHHHHHHcCCeEEEEEeCCHHHHHHHHHHHHHhC----CCEEEEeCccHHhhCCHHHHHHHHHHHHHHCCCC---EE
Confidence 5688889999999988888888888888877662111 2334411 111111 223444566777775 55
Q ss_pred EEE--ecCHhhHHHHHHcCCcEEEEeCC
Q 009774 481 LFV--TDVYQEATAAKAAGLEVVISIRP 506 (526)
Q Consensus 481 l~V--gDs~~Di~~A~~aG~~~i~v~~~ 506 (526)
|+. |.+..++..|.++|+.+|.++.+
T Consensus 77 lHLDHg~~~e~i~~ai~~GFtSVM~DgS 104 (282)
T TIGR01858 77 LHLDHHESLDDIRQKVHAGVRSAMIDGS 104 (282)
T ss_pred EECCCCCCHHHHHHHHHcCCCEEeecCC
Confidence 665 35678999999999999999865
No 332
>PRK13717 conjugal transfer protein TrbI; Provisional
Probab=28.52 E-value=88 Score=27.13 Aligned_cols=16 Identities=13% Similarity=0.083 Sum_probs=13.5
Q ss_pred CCCCceEEEEeccccc
Q 009774 280 SGLFPRCIVLDIEGTT 295 (526)
Q Consensus 280 ~~~~ikaVlFD~DGTL 295 (526)
..+.+..|.|||.+||
T Consensus 41 ~~~~P~iV~FDmK~Tl 56 (128)
T PRK13717 41 RLNAPVTAAFNMKQTV 56 (128)
T ss_pred hcCCCeEEEEehHHHH
Confidence 3457889999999997
No 333
>COG1598 Predicted nuclease of the RNAse H fold, HicB family [General function prediction only]
Probab=28.51 E-value=85 Score=24.32 Aligned_cols=29 Identities=10% Similarity=0.031 Sum_probs=22.9
Q ss_pred CcceeecCCHHHHHHHHHHHHHHHHHHHHHHh
Q 009774 208 HGIYVWGDSWINAKTQAECYHYLFDAAIKLHQ 239 (526)
Q Consensus 208 HG~~~~G~sl~eA~~~~~~lE~~a~~~~~a~~ 239 (526)
=|+.+.|+|+++|+ ..++++.+.++.+..
T Consensus 24 pgc~s~G~T~eea~---~n~~eai~l~~e~~~ 52 (73)
T COG1598 24 PGCHSQGETLEEAL---QNAKEAIELHLEALL 52 (73)
T ss_pred CCccccCCCHHHHH---HHHHHHHHHHHHHHH
Confidence 38889999999999 556777777777644
No 334
>TIGR03365 Bsubt_queE 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. This uncharacterized enzyme, designated QueE, participates in the biosynthesis, from GTP, of 7-cyano-7-deazaguanosine, also called preQ0 because in many species it is a precursor of queuosine. In most Archaea, it is instead the precursor of a different tRNA modified base, archaeosine.
Probab=28.46 E-value=46 Score=32.29 Aligned_cols=29 Identities=14% Similarity=0.158 Sum_probs=25.5
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHHH
Q 009774 403 VFDDVPEALEKWHSLGTKVYIYSSGSRLA 431 (526)
Q Consensus 403 l~pgv~~~L~~L~~~G~~l~vvTn~~~~~ 431 (526)
+.++..++++.|++.|+++.+-||+....
T Consensus 85 l~~~l~~li~~l~~~g~~v~leTNGtl~~ 113 (238)
T TIGR03365 85 LQKPLGELIDLGKAKGYRFALETQGSVWQ 113 (238)
T ss_pred hhHhHHHHHHHHHHCCCCEEEECCCCCcH
Confidence 45789999999999999999999998643
No 335
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=27.92 E-value=62 Score=31.34 Aligned_cols=35 Identities=9% Similarity=-0.016 Sum_probs=31.9
Q ss_pred CCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhc
Q 009774 405 DDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNS 439 (526)
Q Consensus 405 pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l 439 (526)
|...+++++++++|++++++|+.+....+.+++.+
T Consensus 24 ~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~ 58 (249)
T TIGR01485 24 LRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQK 58 (249)
T ss_pred HHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcC
Confidence 66779999999999999999999999999888877
No 336
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=27.88 E-value=51 Score=35.33 Aligned_cols=20 Identities=15% Similarity=-0.066 Sum_probs=13.6
Q ss_pred CCCCceEEEEeccccccccc
Q 009774 280 SGLFPRCIVLDIEGTTTPIS 299 (526)
Q Consensus 280 ~~~~ikaVlFD~DGTL~d~~ 299 (526)
.+..|++|-||||-||+...
T Consensus 8 ~l~~i~~iGFDmDyTLa~Y~ 27 (448)
T PF05761_consen 8 NLKDIDVIGFDMDYTLARYK 27 (448)
T ss_dssp ECCC--EEEE-TBTTTBEE-
T ss_pred ccccCCEEEECcccchhhcC
Confidence 45689999999999998654
No 337
>PRK12738 kbaY tagatose-bisphosphate aldolase; Reviewed
Probab=27.68 E-value=2.3e+02 Score=28.36 Aligned_cols=93 Identities=8% Similarity=0.013 Sum_probs=61.6
Q ss_pred HHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeC---C---cCCCCCHHHHHHHHHHcCCCCCCcE
Q 009774 407 VPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDT---A---VGNKRETPSYVEITNSLGVDKPSEI 480 (526)
Q Consensus 407 v~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~---~---~~~KP~p~~~~~~~~~l~~~~p~~~ 480 (526)
..++|+..++.||-++-+.-.+.+..+.+++..+..+ -..|+.. . ...+.-..+...++++.+++ =+
T Consensus 6 ~k~iL~~A~~~~yAV~AfN~~n~e~~~avi~AAee~~----sPvIlq~s~~~~~~~~~~~~~~~~~~~a~~~~VP---Va 78 (286)
T PRK12738 6 TKYLLQDAQANGYAVPAFNIHNAETIQAILEVCSEMR----SPVILAGTPGTFKHIALEEIYALCSAYSTTYNMP---LA 78 (286)
T ss_pred HHHHHHHHHHCCceEEEEEeCCHHHHHHHHHHHHHHC----CCEEEEcCcchhhhCCHHHHHHHHHHHHHHCCCC---EE
Confidence 5788888888888888888888888888877662111 1334411 1 11122233455567777776 55
Q ss_pred EEE--ecCHhhHHHHHHcCCcEEEEeCC
Q 009774 481 LFV--TDVYQEATAAKAAGLEVVISIRP 506 (526)
Q Consensus 481 l~V--gDs~~Di~~A~~aG~~~i~v~~~ 506 (526)
|+. |.+...+..|.++|..+|.++.+
T Consensus 79 lHLDHg~~~e~i~~ai~~GFtSVM~DgS 106 (286)
T PRK12738 79 LHLDHHESLDDIRRKVHAGVRSAMIDGS 106 (286)
T ss_pred EECCCCCCHHHHHHHHHcCCCeEeecCC
Confidence 666 35668899999999999999865
No 338
>PF04123 DUF373: Domain of unknown function (DUF373); InterPro: IPR007254 This archaeal family of unknown function is predicted to be an integral membrane protein with six transmembrane regions.
Probab=27.32 E-value=1.2e+02 Score=31.17 Aligned_cols=73 Identities=12% Similarity=0.130 Sum_probs=44.1
Q ss_pred HHHHHHHHHHCC--CeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEe
Q 009774 407 VPEALEKWHSLG--TKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVT 484 (526)
Q Consensus 407 v~~~L~~L~~~G--~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~Vg 484 (526)
+.++-++|+++| ..++++|+.+......-.+-. +....++++++ |+.|++|.
T Consensus 53 avkiydeL~~~GedveVA~VsG~~~~~v~ad~~I~-----------------------~qld~vl~~~~---~~~~i~Vs 106 (344)
T PF04123_consen 53 AVKIYDELKAEGEDVEVAVVSGSPDVGVEADRKIA-----------------------EQLDEVLSKFD---PDSAIVVS 106 (344)
T ss_pred HHHHHHHHHhcCCCeEEEEEECCCCCchhhHHHHH-----------------------HHHHHHHHhCC---CCEEEEEe
Confidence 445667777766 678999988764322111110 12344555554 55999999
Q ss_pred cCHhhHH--HHHHcCCcEEEEeC
Q 009774 485 DVYQEAT--AAKAAGLEVVISIR 505 (526)
Q Consensus 485 Ds~~Di~--~A~~aG~~~i~v~~ 505 (526)
|++.|-. ...+.-.+.+++.|
T Consensus 107 DGaeDE~vlPiIqSr~~V~sV~R 129 (344)
T PF04123_consen 107 DGAEDERVLPIIQSRVPVDSVKR 129 (344)
T ss_pred cChhhhhhhHhhhccCceEEEEE
Confidence 9997744 44555556666654
No 339
>PRK06552 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=26.83 E-value=5.6e+02 Score=24.37 Aligned_cols=85 Identities=19% Similarity=0.153 Sum_probs=55.0
Q ss_pred HHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEec---
Q 009774 409 EALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTD--- 485 (526)
Q Consensus 409 ~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgD--- 485 (526)
++++.|.++++ +.|+.+.+.+....+.+.+-.+|+.- +... ....-..+.+..+.++++-. |+ +.||-
T Consensus 5 ~~~~~l~~~~v-i~vir~~~~~~a~~~~~al~~~Gi~~-iEit----~~~~~a~~~i~~l~~~~~~~-p~--~~vGaGTV 75 (213)
T PRK06552 5 EILTKLKANGV-VAVVRGESKEEALKISLAVIKGGIKA-IEVT----YTNPFASEVIKELVELYKDD-PE--VLIGAGTV 75 (213)
T ss_pred HHHHHHHHCCE-EEEEECCCHHHHHHHHHHHHHCCCCE-EEEE----CCCccHHHHHHHHHHHcCCC-CC--eEEeeeeC
Confidence 46788888764 88899988888888888774445531 1111 11222345566666666554 54 44553
Q ss_pred -CHhhHHHHHHcCCcEEE
Q 009774 486 -VYQEATAAKAAGLEVVI 502 (526)
Q Consensus 486 -s~~Di~~A~~aG~~~i~ 502 (526)
+..+++.|.++|.+++.
T Consensus 76 ~~~~~~~~a~~aGA~Fiv 93 (213)
T PRK06552 76 LDAVTARLAILAGAQFIV 93 (213)
T ss_pred CCHHHHHHHHHcCCCEEE
Confidence 34789999999999886
No 340
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=26.68 E-value=38 Score=31.48 Aligned_cols=17 Identities=24% Similarity=0.259 Sum_probs=13.9
Q ss_pred CceEEEEeccccccccc
Q 009774 283 FPRCIVLDIEGTTTPIS 299 (526)
Q Consensus 283 ~ikaVlFD~DGTL~d~~ 299 (526)
..++|+||-||||....
T Consensus 4 ~~k~lflDRDGtin~d~ 20 (181)
T COG0241 4 DQKALFLDRDGTINIDK 20 (181)
T ss_pred CCcEEEEcCCCceecCC
Confidence 37899999999997443
No 341
>TIGR02495 NrdG2 anaerobic ribonucleoside-triphosphate reductase activating protein. This enzyme is a member of the radical-SAM family (pfam04055). It is often gene clustered with the class III (anaerobic) ribonucleotide triphosphate reductase (NrdD, TIGR02487) and presumably fulfills the identical function as NrdG which utilizes S-adenosyl methionine, an iron-sulfur cluster and a reductant (dihydroflavodoxin) to produce a glycine-centered radical in NrdD.
Probab=26.54 E-value=90 Score=28.73 Aligned_cols=28 Identities=29% Similarity=0.414 Sum_probs=24.6
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCchHH
Q 009774 403 VFDDVPEALEKWHSLGTKVYIYSSGSRL 430 (526)
Q Consensus 403 l~pgv~~~L~~L~~~G~~l~vvTn~~~~ 430 (526)
+.|++.++++.+++.|+.+.+.||+...
T Consensus 75 l~~~l~~li~~~~~~g~~v~i~TNg~~~ 102 (191)
T TIGR02495 75 LQAGLPDFLRKVRELGFEVKLDTNGSNP 102 (191)
T ss_pred CcHhHHHHHHHHHHCCCeEEEEeCCCCH
Confidence 5677999999999999999999999743
No 342
>cd05008 SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=26.47 E-value=52 Score=27.86 Aligned_cols=30 Identities=17% Similarity=0.013 Sum_probs=25.0
Q ss_pred CCCHHHHHHHHHHCCCeEEEEeCchHHHHH
Q 009774 404 FDDVPEALEKWHSLGTKVYIYSSGSRLAQR 433 (526)
Q Consensus 404 ~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~ 433 (526)
.+++.+.++.++++|.++..+|+.+.....
T Consensus 59 t~e~~~~~~~a~~~g~~vi~iT~~~~s~la 88 (126)
T cd05008 59 TADTLAALRLAKEKGAKTVAITNVVGSTLA 88 (126)
T ss_pred CHHHHHHHHHHHHcCCeEEEEECCCCChHH
Confidence 367889999999999999999998765443
No 343
>PLN03176 flavanone-3-hydroxylase; Provisional
Probab=26.44 E-value=87 Score=26.89 Aligned_cols=36 Identities=17% Similarity=0.403 Sum_probs=25.2
Q ss_pred ceeeecCCC---Cc---hHHHHHHHHHHhhCCCCeEEEEcCCcce
Q 009774 173 VVPIIENTA---YE---NELTDSLAKAIDAYPKATAVLVRNHGIY 211 (526)
Q Consensus 173 ~vpv~~~~~---~~---~~la~~i~~~l~~~~~~~~vll~nHG~~ 211 (526)
.||+++... ++ .+.++.|.+++.+. -.+.+.|||+-
T Consensus 37 ~iPvIDls~~~~~~~~~~~~~~~L~~A~~~~---GFf~l~nhGi~ 78 (120)
T PLN03176 37 EIPVISIAGIDDGGEKRAEICNKIVEACEEW---GVFQIVDHGVD 78 (120)
T ss_pred CCCeEECccccCCchHHHHHHHHHHHHHHHC---CEEEEECCCCC
Confidence 389998742 11 23567777777764 78899999975
No 344
>cd00956 Transaldolase_FSA Transaldolase-like fructose-6-phosphate aldolases (FSA) found in bacteria and archaea, which are member of the MipB/TalC subfamily of class I aldolases. FSA catalyze an aldol cleavage of fructose 6-phosphate and do not utilize fructose, fructose 1-phosphate, fructose 1,6-phosphate, or dihydroxyacetone phosphate. The enzymes belong to the transaldolase family that serves in transfer reactions in the pentose phosphate cycle, and are more distantly related to fructose 1,6-bisphosphate aldolase.
Probab=26.34 E-value=3.9e+02 Score=25.35 Aligned_cols=99 Identities=20% Similarity=0.150 Sum_probs=59.0
Q ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE---eC-CcCCCCCHHHHHHHHHHcCCC
Q 009774 400 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF---DT-AVGNKRETPSYVEITNSLGVD 475 (526)
Q Consensus 400 ~~~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~---~~-~~~~KP~p~~~~~~~~~l~~~ 475 (526)
+++....-.+.++.|++.|+++.+-+=.+........+. |- +|..-++ ++ ...+-+--.-...++++.++
T Consensus 83 KIP~T~~gl~ai~~L~~~gi~v~~T~V~s~~Qa~~Aa~A----GA-~yvsP~vgR~~~~g~dg~~~i~~i~~~~~~~~~- 156 (211)
T cd00956 83 KIPVTEDGLKAIKKLSEEGIKTNVTAIFSAAQALLAAKA----GA-TYVSPFVGRIDDLGGDGMELIREIRTIFDNYGF- 156 (211)
T ss_pred EEcCcHhHHHHHHHHHHcCCceeeEEecCHHHHHHHHHc----CC-CEEEEecChHhhcCCCHHHHHHHHHHHHHHcCC-
Confidence 445556778899999999999887666666555444443 21 2222222 11 11111122233345556665
Q ss_pred CCCcEEEEe-cCHhhHHHHHHcCCcEEEEeC
Q 009774 476 KPSEILFVT-DVYQEATAAKAAGLEVVISIR 505 (526)
Q Consensus 476 ~p~~~l~Vg-Ds~~Di~~A~~aG~~~i~v~~ 505 (526)
+-+++.-| =++.++..|..+|+..+-+..
T Consensus 157 -~tkil~As~r~~~ei~~a~~~Gad~vTv~~ 186 (211)
T cd00956 157 -DTKILAASIRNPQHVIEAALAGADAITLPP 186 (211)
T ss_pred -CceEEecccCCHHHHHHHHHcCCCEEEeCH
Confidence 34555555 345899999999999987764
No 345
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=26.09 E-value=2.8e+02 Score=28.31 Aligned_cols=97 Identities=12% Similarity=-0.016 Sum_probs=56.9
Q ss_pred HHHHHHHHHHC-CC-eEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCC--cCCCCCHHHHHHHHHHcCCCCCCcEEE
Q 009774 407 VPEALEKWHSL-GT-KVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTA--VGNKRETPSYVEITNSLGVDKPSEILF 482 (526)
Q Consensus 407 v~~~L~~L~~~-G~-~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~--~~~KP~p~~~~~~~~~l~~~~p~~~l~ 482 (526)
...+++.|+++ ++ ...++|+........+++.+ ++...++..++.. ...+--......+.+.+.-.+|+=++.
T Consensus 16 ~~p~~~~l~~~~~~~~~~~~tg~h~~~~~~~~~~~---~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDiv~~ 92 (365)
T TIGR00236 16 MAPLIRALKKYPEIDSYVIVTAQHREMLDQVLDLF---HLPPDYDLNIMSPGQTLGEITSNMLEGLEELLLEEKPDIVLV 92 (365)
T ss_pred HHHHHHHHhhCCCCCEEEEEeCCCHHHHHHHHHhc---CCCCCeeeecCCCCCCHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 34678888875 33 36788888877777777777 7764333333221 111222233333333332222666666
Q ss_pred EecCHh---hHHHHHHcCCcEEEEeCC
Q 009774 483 VTDVYQ---EATAAKAAGLEVVISIRP 506 (526)
Q Consensus 483 VgDs~~---Di~~A~~aG~~~i~v~~~ 506 (526)
.||+.. ...+|+..|+..+++..+
T Consensus 93 ~gd~~~~la~a~aa~~~~ipv~h~~~g 119 (365)
T TIGR00236 93 QGDTTTTLAGALAAFYLQIPVGHVEAG 119 (365)
T ss_pred eCCchHHHHHHHHHHHhCCCEEEEeCC
Confidence 788764 566778889999888654
No 346
>PLN02997 flavonol synthase
Probab=25.61 E-value=78 Score=32.34 Aligned_cols=35 Identities=31% Similarity=0.481 Sum_probs=27.8
Q ss_pred ceeeecCCC-CchHHHHHHHHHHhhCCCCeEEEEcCCcc
Q 009774 173 VVPIIENTA-YENELTDSLAKAIDAYPKATAVLVRNHGI 210 (526)
Q Consensus 173 ~vpv~~~~~-~~~~la~~i~~~l~~~~~~~~vll~nHG~ 210 (526)
.||+|+..+ ...+.+++|.++.++. -.+.+.|||+
T Consensus 32 ~IPvIDls~~~~~~~~~~l~~Ac~~~---GFF~v~nHGI 67 (325)
T PLN02997 32 DVPVVDLSVSDEDFLVREVVKASEEW---GVFQVVNHGI 67 (325)
T ss_pred CCCeEECCCCCHHHHHHHHHHHHHHC---CEEEEECCCC
Confidence 599999864 3456778888888874 7888999997
No 347
>PRK12737 gatY tagatose-bisphosphate aldolase; Reviewed
Probab=25.52 E-value=4.8e+02 Score=26.11 Aligned_cols=94 Identities=9% Similarity=0.035 Sum_probs=63.1
Q ss_pred CHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeC---CcCCCCC---HHHHHHHHHHcCCCCCCc
Q 009774 406 DVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDT---AVGNKRE---TPSYVEITNSLGVDKPSE 479 (526)
Q Consensus 406 gv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~---~~~~KP~---p~~~~~~~~~l~~~~p~~ 479 (526)
...++|+..++.||-++-+.-.+.+..+.+++..+. ..-..|+.. ....-+. ..+...++++..++ =
T Consensus 5 ~~~~~l~~A~~~~yaV~AfN~~n~e~~~avi~AAee----~~sPvIiq~~~~~~~~~g~~~~~~~~~~~a~~~~VP---V 77 (284)
T PRK12737 5 STKNMLKKAQAEGYAVPAFNIHNLETLQVVVETAAE----LRSPVILAGTPGTFSYAGTDYIVAIAEVAARKYNIP---L 77 (284)
T ss_pred cHHHHHHHHHHcCceEEEEEeCCHHHHHHHHHHHHH----hCCCEEEEcCccHHhhCCHHHHHHHHHHHHHHCCCC---E
Confidence 467899999999999998888888888888887621 112344411 1111121 22344566777775 5
Q ss_pred EEEEe--cCHhhHHHHHHcCCcEEEEeCC
Q 009774 480 ILFVT--DVYQEATAAKAAGLEVVISIRP 506 (526)
Q Consensus 480 ~l~Vg--Ds~~Di~~A~~aG~~~i~v~~~ 506 (526)
+|+.+ .+...+..|.++|..+|.++.+
T Consensus 78 alHLDH~~~~e~i~~ai~~GftSVMiDgS 106 (284)
T PRK12737 78 ALHLDHHEDLDDIKKKVRAGIRSVMIDGS 106 (284)
T ss_pred EEECCCCCCHHHHHHHHHcCCCeEEecCC
Confidence 55553 4567899999999999999865
No 348
>PLN02591 tryptophan synthase
Probab=25.25 E-value=6.2e+02 Score=24.80 Aligned_cols=96 Identities=9% Similarity=0.011 Sum_probs=55.6
Q ss_pred cCCCHHHHHHHHHHCCCeEEEEeCc--hHHHHHHHHhhcCCCCcccccceEEeC---CcCCCCCHHHHHHHHHHcCCCCC
Q 009774 403 VFDDVPEALEKWHSLGTKVYIYSSG--SRLAQRLIFGNSNYGDLRKYLSGFFDT---AVGNKRETPSYVEITNSLGVDKP 477 (526)
Q Consensus 403 l~pgv~~~L~~L~~~G~~l~vvTn~--~~~~~~~~l~~l~~~gl~~~fd~i~~~---~~~~KP~p~~~~~~~~~l~~~~p 477 (526)
++++..++.+.++++|+....+-.. +.+.++.+.+.. +-|-..+.. .+.....|.-+...++++.-. .
T Consensus 116 P~ee~~~~~~~~~~~gl~~I~lv~Ptt~~~ri~~ia~~~------~gFIY~Vs~~GvTG~~~~~~~~~~~~i~~vk~~-~ 188 (250)
T PLN02591 116 PLEETEALRAEAAKNGIELVLLTTPTTPTERMKAIAEAS------EGFVYLVSSTGVTGARASVSGRVESLLQELKEV-T 188 (250)
T ss_pred CHHHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHhC------CCcEEEeeCCCCcCCCcCCchhHHHHHHHHHhc-C
Confidence 4567889999999999886666533 334455555544 223233321 121112233344434333322 3
Q ss_pred CcEEEEe---cCHhhHHHHHHcCCcEEEEeC
Q 009774 478 SEILFVT---DVYQEATAAKAAGLEVVISIR 505 (526)
Q Consensus 478 ~~~l~Vg---Ds~~Di~~A~~aG~~~i~v~~ 505 (526)
+--++|| .+..|++...+.|...+.|-.
T Consensus 189 ~~Pv~vGFGI~~~e~v~~~~~~GADGvIVGS 219 (250)
T PLN02591 189 DKPVAVGFGISKPEHAKQIAGWGADGVIVGS 219 (250)
T ss_pred CCceEEeCCCCCHHHHHHHHhcCCCEEEECH
Confidence 4456677 345799999999999988864
No 349
>COG0191 Fba Fructose/tagatose bisphosphate aldolase [Carbohydrate transport and metabolism]
Probab=25.05 E-value=5.9e+02 Score=25.52 Aligned_cols=94 Identities=15% Similarity=0.158 Sum_probs=66.5
Q ss_pred CHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEe-CCc-----C-CCCCHHHHHHHHHHcCCCCCC
Q 009774 406 DVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFD-TAV-----G-NKRETPSYVEITNSLGVDKPS 478 (526)
Q Consensus 406 gv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~-~~~-----~-~KP~p~~~~~~~~~l~~~~p~ 478 (526)
...++|+..+++||-+.-+-=.+.+..+.+++..+. ..-..|+. +.+ . .+--..+...+++.++++
T Consensus 5 ~~~~ll~~Ake~~yAvpAfN~~nlE~~~AileaA~e----~~sPvIiq~S~g~~~y~gg~~~~~~~v~~~a~~~~vP--- 77 (286)
T COG0191 5 SMKELLDKAKENGYAVPAFNINNLETLQAILEAAEE----EKSPVIIQFSEGAAKYAGGADSLAHMVKALAEKYGVP--- 77 (286)
T ss_pred cHHHHHHHHHHcCCceeeeeecCHHHHHHHHHHHHH----hCCCEEEEecccHHHHhchHHHHHHHHHHHHHHCCCC---
Confidence 447899999999999888877777888888887621 12234441 111 1 133334555678888986
Q ss_pred cEEEE--ecCHhhHHHHHHcCCcEEEEeCC
Q 009774 479 EILFV--TDVYQEATAAKAAGLEVVISIRP 506 (526)
Q Consensus 479 ~~l~V--gDs~~Di~~A~~aG~~~i~v~~~ 506 (526)
=|++- |++..++..|.++|..++.++..
T Consensus 78 V~lHlDHg~~~~~~~~ai~~GFsSvMiDgS 107 (286)
T COG0191 78 VALHLDHGASFEDCKQAIRAGFSSVMIDGS 107 (286)
T ss_pred EEEECCCCCCHHHHHHHHhcCCceEEecCC
Confidence 66666 57889999999999999999865
No 350
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=24.76 E-value=3.6e+02 Score=24.50 Aligned_cols=84 Identities=17% Similarity=0.108 Sum_probs=48.9
Q ss_pred CCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEe
Q 009774 405 DDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVT 484 (526)
Q Consensus 405 pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~Vg 484 (526)
+=+.++++.+.++|++++++-..+.... ...+.+. .-.+....+....+.. +++-...+++.++-. .-++|+||
T Consensus 35 dl~~~l~~~~~~~~~~ifllG~~~~~~~-~~~~~l~--~~yP~l~ivg~~~g~f--~~~~~~~i~~~I~~~-~pdiv~vg 108 (172)
T PF03808_consen 35 DLFPDLLRRAEQRGKRIFLLGGSEEVLE-KAAANLR--RRYPGLRIVGYHHGYF--DEEEEEAIINRINAS-GPDIVFVG 108 (172)
T ss_pred HHHHHHHHHHHHcCCeEEEEeCCHHHHH-HHHHHHH--HHCCCeEEEEecCCCC--ChhhHHHHHHHHHHc-CCCEEEEE
Confidence 4456788888889999999999876543 2333220 0001111111111212 556677788888776 77899999
Q ss_pred cCH--hhHHHHH
Q 009774 485 DVY--QEATAAK 494 (526)
Q Consensus 485 Ds~--~Di~~A~ 494 (526)
-.. ...-.++
T Consensus 109 lG~PkQE~~~~~ 120 (172)
T PF03808_consen 109 LGAPKQERWIAR 120 (172)
T ss_pred CCCCHHHHHHHH
Confidence 554 3444433
No 351
>PLN02704 flavonol synthase
Probab=24.59 E-value=1e+02 Score=31.59 Aligned_cols=36 Identities=33% Similarity=0.441 Sum_probs=27.7
Q ss_pred ceeeecCCC-CchHHHHHHHHHHhhCCCCeEEEEcCCcce
Q 009774 173 VVPIIENTA-YENELTDSLAKAIDAYPKATAVLVRNHGIY 211 (526)
Q Consensus 173 ~vpv~~~~~-~~~~la~~i~~~l~~~~~~~~vll~nHG~~ 211 (526)
.||+|+... ...++++.|.+++++. -.+.+.|||+=
T Consensus 42 ~iPvIDls~~~~~~~~~~l~~Ac~~~---GFf~l~nHGI~ 78 (335)
T PLN02704 42 QVPTIDLSDPDEEKLTRLIAEASKEW---GMFQIVNHGIP 78 (335)
T ss_pred CCCeEECCCccHHHHHHHHHHHHHHc---CEEEEEcCCCC
Confidence 499999853 4456778888888874 78889999983
No 352
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=24.55 E-value=91 Score=29.00 Aligned_cols=75 Identities=11% Similarity=0.107 Sum_probs=30.2
Q ss_pred HHHHHHHHCCCeEEEEeCchHHHHHHHHhhcC--CCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCCcEEEEecC
Q 009774 409 EALEKWHSLGTKVYIYSSGSRLAQRLIFGNSN--YGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDV 486 (526)
Q Consensus 409 ~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~--~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~~~l~VgDs 486 (526)
.+|..++++|++++++...-.+..-.....+. ...+...||.++-. + +.-..-+.++|+. ++++...||-
T Consensus 109 nll~~a~~~~ip~~LvNarls~~s~~~~~~~~~~~r~~l~~f~~i~aq------s-~~da~r~~~lG~~-~~~v~v~Gnl 180 (186)
T PF04413_consen 109 NLLREAKRRGIPVVLVNARLSERSFRRYRRFPFLFRPLLSRFDRILAQ------S-EADAERFRKLGAP-PERVHVTGNL 180 (186)
T ss_dssp HHHHH-----S-EEEEEE--------------HHHHHHGGG-SEEEES------S-HHHHHHHHTTT-S---SEEE---G
T ss_pred HHHHHHhhcCCCEEEEeeeeccccchhhhhhHHHHHHHHHhCCEEEEC------C-HHHHHHHHHcCCC-cceEEEeCcc
Confidence 68999999999999998765543222222221 01234667777611 1 2234556789997 9999999997
Q ss_pred HhhHH
Q 009774 487 YQEAT 491 (526)
Q Consensus 487 ~~Di~ 491 (526)
-.|..
T Consensus 181 Kfd~~ 185 (186)
T PF04413_consen 181 KFDQA 185 (186)
T ss_dssp GG---
T ss_pred hhccc
Confidence 77753
No 353
>TIGR01101 V_ATP_synt_F vacuolar ATP synthase F subunit. This model describes the vacuolar ATP synthase F subunit (14 kDa subunit) in eukaryotes. In some archaeal species this protein subunit is referred as G subunit
Probab=24.54 E-value=2e+02 Score=24.62 Aligned_cols=63 Identities=3% Similarity=0.078 Sum_probs=46.9
Q ss_pred CCHHHHHHH-HHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE---eCCcCCCCCHHHHHHHHHHc
Q 009774 405 DDVPEALEK-WHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF---DTAVGNKRETPSYVEITNSL 472 (526)
Q Consensus 405 pgv~~~L~~-L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~---~~~~~~KP~p~~~~~~~~~l 472 (526)
+++.+.|++ |.+.++-+.++|..-.+..+..+++. . ..+-.++ +......|..+...+-.+++
T Consensus 46 eei~~~~~~~l~~~digIIlIte~~a~~i~~~I~~~---~--~~~PaIieIP~k~~~y~~~~d~i~~~~~~~ 112 (115)
T TIGR01101 46 SEIEDCFNRFLKRDDIAIILINQHIAEMIRHAVDAH---T--RSIPAVLEIPSKDHPYDASKDSILRRARGM 112 (115)
T ss_pred HHHHHHHHHHhhcCCeEEEEEcHHHHHHhHHHHHhc---C--CcCCEEEEECCCCCCCCCcccHHHHHHHHH
Confidence 567888888 77889999999999888888888876 3 4555666 44566777777766655543
No 354
>cd00947 TBP_aldolase_IIB Tagatose-1,6-bisphosphate (TBP) aldolase and related Type B Class II aldolases. TBP aldolase is a tetrameric class II aldolase that catalyzes the reversible condensation of dihydroxyacetone phosphate with glyceraldehyde 3-phsophate to produce tagatose 1,6-bisphosphate. There is an absolute requirement for a divalent metal ion, usually zinc, and in addition the enzymes are activated by monovalent cations such as Na+. The type A and type B Class II FBPA's differ in the presence and absence of distinct indels in the sequence that result in differing loop lengths in the structures.
Probab=24.52 E-value=2.7e+02 Score=27.71 Aligned_cols=92 Identities=14% Similarity=0.075 Sum_probs=58.2
Q ss_pred HHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeC---CcCCCC---CHHHHHHHHHHcCCCCCCcEE
Q 009774 408 PEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDT---AVGNKR---ETPSYVEITNSLGVDKPSEIL 481 (526)
Q Consensus 408 ~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~---~~~~KP---~p~~~~~~~~~l~~~~p~~~l 481 (526)
.++|+..++.||-++-+.-.+.+..+.+++..+..+ -..|+.. .....+ -..+...++++..++ =+|
T Consensus 2 k~lL~~A~~~~yaV~AfN~~n~e~~~avi~AAe~~~----sPvIi~~~~~~~~~~~~~~~~~~~~~~a~~~~VP---V~l 74 (276)
T cd00947 2 KELLKKAREGGYAVGAFNINNLETLKAILEAAEETR----SPVILQISEGAIKYAGLELLVAMVKAAAERASVP---VAL 74 (276)
T ss_pred HHHHHHHHHCCceEEEEeeCCHHHHHHHHHHHHHhC----CCEEEEcCcchhhhCCHHHHHHHHHHHHHHCCCC---EEE
Confidence 478888888888888888778888887777662111 2334411 111122 222344456666665 455
Q ss_pred EEe--cCHhhHHHHHHcCCcEEEEeCC
Q 009774 482 FVT--DVYQEATAAKAAGLEVVISIRP 506 (526)
Q Consensus 482 ~Vg--Ds~~Di~~A~~aG~~~i~v~~~ 506 (526)
+.+ .++.++..|.++|..+|.++.+
T Consensus 75 HLDH~~~~~~i~~ai~~GftSVMiD~S 101 (276)
T cd00947 75 HLDHGSSFELIKRAIRAGFSSVMIDGS 101 (276)
T ss_pred ECCCCCCHHHHHHHHHhCCCEEEeCCC
Confidence 553 4467899999999999998864
No 355
>PRK10076 pyruvate formate lyase II activase; Provisional
Probab=24.31 E-value=1.2e+02 Score=28.98 Aligned_cols=34 Identities=12% Similarity=0.093 Sum_probs=25.7
Q ss_pred CCC-HHHHHHHHHHCCCeEEEEeCc--hHHHHHHHHh
Q 009774 404 FDD-VPEALEKWHSLGTKVYIYSSG--SRLAQRLIFG 437 (526)
Q Consensus 404 ~pg-v~~~L~~L~~~G~~l~vvTn~--~~~~~~~~l~ 437 (526)
.++ +.++++.+|+.|+.+++.||+ +.+..+.++.
T Consensus 52 q~~fl~~l~~~~k~~gi~~~leTnG~~~~~~~~~l~~ 88 (213)
T PRK10076 52 QAEFATRFLQRLRLWGVSCAIETAGDAPASKLLPLAK 88 (213)
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHH
Confidence 344 689999999999999999999 4444443333
No 356
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=24.08 E-value=1.7e+02 Score=35.17 Aligned_cols=87 Identities=14% Similarity=0.174 Sum_probs=54.1
Q ss_pred CCHHHHHHHHHHCCCeEEEEeCchHHH--HHH--HHhhcCCCCccc--ccceEEeCCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774 405 DDVPEALEKWHSLGTKVYIYSSGSRLA--QRL--IFGNSNYGDLRK--YLSGFFDTAVGNKRETPSYVEITNSLGVDKPS 478 (526)
Q Consensus 405 pgv~~~L~~L~~~G~~l~vvTn~~~~~--~~~--~l~~l~~~gl~~--~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~ 478 (526)
+...+.++.+.++|+++..+.-..... ... .+.+- .++. .|-+++.-....||+..--.+.|++.|+.
T Consensus 601 ~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~---~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~--- 674 (1054)
T TIGR01657 601 SDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRD---AVESNLTFLGFIVFENPLKPDTKEVIKELKRASIR--- 674 (1054)
T ss_pred hhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhhccHH---HHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCe---
Confidence 456677888889999988776332110 000 00110 1111 12333322344688887778888899995
Q ss_pred cEEEE-ecCH-hhHHHHHHcCC
Q 009774 479 EILFV-TDVY-QEATAAKAAGL 498 (526)
Q Consensus 479 ~~l~V-gDs~-~Di~~A~~aG~ 498 (526)
++|| ||++ .-+.-|+++|+
T Consensus 675 -v~miTGD~~~TA~~iA~~~gi 695 (1054)
T TIGR01657 675 -TVMITGDNPLTAVHVARECGI 695 (1054)
T ss_pred -EEEECCCCHHHHHHHHHHcCC
Confidence 6776 9999 78888999999
No 357
>PRK08185 hypothetical protein; Provisional
Probab=23.92 E-value=4.1e+02 Score=26.58 Aligned_cols=92 Identities=10% Similarity=0.014 Sum_probs=59.4
Q ss_pred HHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEe-CC----cCCCCCHHHHHHHHHHcCCCCCCcEEE
Q 009774 408 PEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFD-TA----VGNKRETPSYVEITNSLGVDKPSEILF 482 (526)
Q Consensus 408 ~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~-~~----~~~KP~p~~~~~~~~~l~~~~p~~~l~ 482 (526)
.++|+..++.||-++-+.-.+.+..+.+++..+. ..-..|+. .. ....+-..+...+.++..++ =+++
T Consensus 2 ~~~L~~A~~~~yaV~AfN~~n~e~~~avi~AAee----~~sPvIl~~~~~~~~~~~~~~~~~~~~~a~~~~vP---V~lH 74 (283)
T PRK08185 2 KELLKVAKEHQFAVGAFNVADSCFLRAVVEEAEA----NNAPAIIAIHPNELDFLGDNFFAYVRERAKRSPVP---FVIH 74 (283)
T ss_pred HHHHHHHHHcCceEEEEEeCCHHHHHHHHHHHHH----hCCCEEEEeCcchhhhccHHHHHHHHHHHHHCCCC---EEEE
Confidence 4788888888888888888888888888776621 11223331 11 11122333444566677774 5555
Q ss_pred E--ecCHhhHHHHHHcCCcEEEEeCC
Q 009774 483 V--TDVYQEATAAKAAGLEVVISIRP 506 (526)
Q Consensus 483 V--gDs~~Di~~A~~aG~~~i~v~~~ 506 (526)
. |.+..+++.|.++|..+|.+...
T Consensus 75 LDHg~~~e~i~~ai~~Gf~SVM~D~S 100 (283)
T PRK08185 75 LDHGATIEDVMRAIRCGFTSVMIDGS 100 (283)
T ss_pred CCCCCCHHHHHHHHHcCCCEEEEeCC
Confidence 5 35567899999999999988754
No 358
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=23.85 E-value=69 Score=27.20 Aligned_cols=29 Identities=10% Similarity=0.156 Sum_probs=25.2
Q ss_pred CCCHHHHHHHHHHCCCeEEEEeCchHHHH
Q 009774 404 FDDVPEALEKWHSLGTKVYIYSSGSRLAQ 432 (526)
Q Consensus 404 ~pgv~~~L~~L~~~G~~l~vvTn~~~~~~ 432 (526)
.+.+.+.++.+|++|.++..+|+.+....
T Consensus 60 t~~~~~~~~~a~~~g~~vi~iT~~~~s~l 88 (128)
T cd05014 60 TDELLNLLPHLKRRGAPIIAITGNPNSTL 88 (128)
T ss_pred CHHHHHHHHHHHHCCCeEEEEeCCCCCch
Confidence 47889999999999999999999876643
No 359
>PLN02382 probable sucrose-phosphatase
Probab=23.81 E-value=48 Score=35.15 Aligned_cols=15 Identities=27% Similarity=0.204 Sum_probs=11.7
Q ss_pred ceEEEEecccccccc
Q 009774 284 PRCIVLDIEGTTTPI 298 (526)
Q Consensus 284 ikaVlFD~DGTL~d~ 298 (526)
.-.|+-||||||++.
T Consensus 9 ~~lI~sDLDGTLL~~ 23 (413)
T PLN02382 9 RLMIVSDLDHTMVDH 23 (413)
T ss_pred CEEEEEcCCCcCcCC
Confidence 346666999999975
No 360
>PF00532 Peripla_BP_1: Periplasmic binding proteins and sugar binding domain of LacI family; InterPro: IPR001761 This family includes the periplasmic binding proteins, and the LacI family transcriptional regulators. The periplasmic binding proteins are the primary receptors for chemotaxis and transport of many sugar based solutes. The LacI family of proteins consist of transcriptional regulators related to the lac repressor. In this case, generally the sugar binding domain binds a sugar which changes the DNA binding activity of the repressor domain (lacI) [, ].; PDB: 1BAP_A 7ABP_A 6ABP_A 1ABF_A 5ABP_A 2WRZ_B 9ABP_A 1APB_A 1ABE_A 8ABP_A ....
Probab=23.38 E-value=2.9e+02 Score=27.15 Aligned_cols=59 Identities=10% Similarity=0.208 Sum_probs=34.7
Q ss_pred HHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCC
Q 009774 409 EALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGV 474 (526)
Q Consensus 409 ~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~ 474 (526)
.+-+.++++||.+.+++.......+..++.+ +....|+++-. ...++.+-+....+. ++
T Consensus 22 gIe~~a~~~Gy~l~l~~t~~~~~~e~~i~~l----~~~~vDGiI~~--s~~~~~~~l~~~~~~-~i 80 (279)
T PF00532_consen 22 GIEQEAREHGYQLLLCNTGDDEEKEEYIELL----LQRRVDGIILA--SSENDDEELRRLIKS-GI 80 (279)
T ss_dssp HHHHHHHHTTCEEEEEEETTTHHHHHHHHHH----HHTTSSEEEEE--SSSCTCHHHHHHHHT-TS
T ss_pred HHHHHHHHcCCEEEEecCCCchHHHHHHHHH----HhcCCCEEEEe--cccCChHHHHHHHHc-CC
Confidence 3456678899999876655444434677776 56678888722 222333345555554 44
No 361
>TIGR00190 thiC thiamine biosynthesis protein ThiC. The thiC ortholog is designated thiA in Bacillus subtilis.
Probab=23.09 E-value=1.2e+02 Score=31.68 Aligned_cols=90 Identities=20% Similarity=0.227 Sum_probs=61.1
Q ss_pred cCccCCCH-HHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeCCcCCCCCHHHHHHHHHHcCCCCCC
Q 009774 400 EGEVFDDV-PEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPS 478 (526)
Q Consensus 400 ~~~l~pgv-~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~~~~~KP~p~~~~~~~~~l~~~~p~ 478 (526)
...+..|+ .+.++.|++.|..+.|||-+..-....++.+-....+..+||.+ +.+++++++.
T Consensus 156 fmTiH~Gi~~~~~~~~~~~~R~~giVSRGGs~~~~WM~~~~~ENPlye~fD~l--------------LeI~~~yDVt--- 218 (423)
T TIGR00190 156 FMTIHAGVLLEYVERLKRSGRITGIVSRGGAILAAWMLHHHKENPLYKNFDYI--------------LEIAKEYDVT--- 218 (423)
T ss_pred EEEEccchhHHHHHHHHhCCCccCeecCcHHHHHHHHHHcCCcCchHHHHHHH--------------HHHHHHhCee---
Confidence 34566775 78999999999999999999998888888776555555555544 3455555543
Q ss_pred cEEEEecCHh---------------------hHHHHHHcCCcEEEEeCCCCC
Q 009774 479 EILFVTDVYQ---------------------EATAAKAAGLEVVISIRPGNG 509 (526)
Q Consensus 479 ~~l~VgDs~~---------------------Di~~A~~aG~~~i~v~~~~~~ 509 (526)
|-.||+.. =++-|+++|++++. ..+|+.
T Consensus 219 --lSLGDglRPG~i~DA~D~aQi~El~~lgeL~~rA~e~gVQvMV-EGPGHv 267 (423)
T TIGR00190 219 --LSLGDGLRPGCIADATDRAQISELITLGELVERAREADVQCMV-EGPGHV 267 (423)
T ss_pred --eeccCCcCCCccccCCcHHHHHHHHHHHHHHHHHHHcCCeEEE-ECCCCC
Confidence 44555431 14678999998874 333443
No 362
>smart00540 LEM in nuclear membrane-associated proteins. LEM, domain in nuclear membrane-associated proteins, including lamino-associated polypeptide 2 and emerin.
Probab=22.93 E-value=79 Score=22.09 Aligned_cols=31 Identities=10% Similarity=-0.050 Sum_probs=27.5
Q ss_pred HHHHHHHHCCCeEEEEeCchHHHHHHHHhhc
Q 009774 409 EALEKWHSLGTKVYIYSSGSRLAQRLIFGNS 439 (526)
Q Consensus 409 ~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l 439 (526)
++.+.|++.|++.+=||...+.....+|..+
T Consensus 10 eL~~~L~~~G~~~gPIt~sTR~vy~kkL~~~ 40 (44)
T smart00540 10 ELRAELKQYGLPPGPITDTTRKLYEKKLRKL 40 (44)
T ss_pred HHHHHHHHcCCCCCCcCcchHHHHHHHHHHH
Confidence 7889999999999999999999888877765
No 363
>PRK07998 gatY putative fructose-1,6-bisphosphate aldolase; Reviewed
Probab=22.55 E-value=6.7e+02 Score=25.07 Aligned_cols=94 Identities=11% Similarity=0.064 Sum_probs=55.1
Q ss_pred CHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeC---CcCCCC---CHHHHHHHHHHcCCCCCCc
Q 009774 406 DVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDT---AVGNKR---ETPSYVEITNSLGVDKPSE 479 (526)
Q Consensus 406 gv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~---~~~~KP---~p~~~~~~~~~l~~~~p~~ 479 (526)
...++|+..+++||-++-+.-.+.+.++.+++..+. ..-..|+.. ....-+ -..+...++++.+++ =
T Consensus 5 ~~k~ll~~A~~~~yaV~AfN~~n~e~~~avi~AAe~----~~sPvIl~~~~~~~~~~g~~~~~~~~~~~A~~~~vP---V 77 (283)
T PRK07998 5 NGRILLDRIQEKHVLAGAFNTTNLETTISILNAIER----SGLPNFIQIAPTNAQLSGYDYIYEIVKRHADKMDVP---V 77 (283)
T ss_pred cHHHHHHHHHHCCCEEEEEeeCCHHHHHHHHHHHHH----hCCCEEEECcHhHHhhCCHHHHHHHHHHHHHHCCCC---E
Confidence 356788888888888887777777777777776521 111223311 111111 122444466666664 4
Q ss_pred EEEEe--cCHhhHHHHHHcCCcEEEEeCC
Q 009774 480 ILFVT--DVYQEATAAKAAGLEVVISIRP 506 (526)
Q Consensus 480 ~l~Vg--Ds~~Di~~A~~aG~~~i~v~~~ 506 (526)
+++.+ .+..++.-|.++|..+|.++.+
T Consensus 78 ~lHLDH~~~~e~i~~Ai~~GftSVM~DgS 106 (283)
T PRK07998 78 SLHLDHGKTFEDVKQAVRAGFTSVMIDGA 106 (283)
T ss_pred EEECcCCCCHHHHHHHHHcCCCEEEEeCC
Confidence 44443 3456788888888888888643
No 364
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=22.40 E-value=97 Score=35.46 Aligned_cols=16 Identities=38% Similarity=0.650 Sum_probs=14.0
Q ss_pred CceEEEEecccccccc
Q 009774 283 FPRCIVLDIEGTTTPI 298 (526)
Q Consensus 283 ~ikaVlFD~DGTL~d~ 298 (526)
..+.|+||+||||++.
T Consensus 491 ~~rLi~~D~DGTL~~~ 506 (726)
T PRK14501 491 SRRLLLLDYDGTLVPF 506 (726)
T ss_pred cceEEEEecCccccCC
Confidence 4689999999999974
No 365
>PRK07709 fructose-bisphosphate aldolase; Provisional
Probab=22.30 E-value=7.6e+02 Score=24.72 Aligned_cols=96 Identities=11% Similarity=0.093 Sum_probs=63.0
Q ss_pred CHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeC-C--c----CCCCCHHHHHHHHHHcCCCCCC
Q 009774 406 DVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDT-A--V----GNKRETPSYVEITNSLGVDKPS 478 (526)
Q Consensus 406 gv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~-~--~----~~KP~p~~~~~~~~~l~~~~p~ 478 (526)
.+.++|+..++.+|-++-+.-.+.+..+.+++..+ - ..-..|+.. . . ..+.-..+...++++..+. --
T Consensus 5 ~~~~lL~~A~~~~yAV~AfN~~n~e~~~avi~AAe---~-~~sPvIiq~~~~~~~~~~~~~~~~~~~~~~a~~~~~~-VP 79 (285)
T PRK07709 5 SMKEMLNKALEGKYAVGQFNMNNLEWTQAILAAAE---E-EKSPVILGVSEGAARHMTGFKTVVAMVKALIEEMNIT-VP 79 (285)
T ss_pred cHHHHHHHHHHCCceEEEEEECCHHHHHHHHHHHH---H-HCCCEEEEcCcchhhhcCCHHHHHHHHHHHHHHcCCC-Cc
Confidence 46789999999999999888888888888877662 1 112334411 1 1 1122223455566666632 22
Q ss_pred cEEEEe--cCHhhHHHHHHcCCcEEEEeCC
Q 009774 479 EILFVT--DVYQEATAAKAAGLEVVISIRP 506 (526)
Q Consensus 479 ~~l~Vg--Ds~~Di~~A~~aG~~~i~v~~~ 506 (526)
=+|+.+ .+..++..|.++|..+|.++.+
T Consensus 80 V~lHLDHg~~~e~i~~ai~~GftSVM~DgS 109 (285)
T PRK07709 80 VAIHLDHGSSFEKCKEAIDAGFTSVMIDAS 109 (285)
T ss_pred EEEECCCCCCHHHHHHHHHcCCCEEEEeCC
Confidence 566664 5568999999999999999865
No 366
>PRK09195 gatY tagatose-bisphosphate aldolase; Reviewed
Probab=22.12 E-value=5.7e+02 Score=25.61 Aligned_cols=93 Identities=6% Similarity=0.011 Sum_probs=59.8
Q ss_pred HHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEEeC---CcCC---CCCHHHHHHHHHHcCCCCCCcE
Q 009774 407 VPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDT---AVGN---KRETPSYVEITNSLGVDKPSEI 480 (526)
Q Consensus 407 v~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~~~---~~~~---KP~p~~~~~~~~~l~~~~p~~~ 480 (526)
..++|+..++.||-++-+.-.+.+..+.+++..+..+ -..|+.. .... ..-..+...++++..++ =+
T Consensus 6 ~k~il~~A~~~~yaV~AfN~~n~e~~~avi~AAee~~----sPvIiq~~~~~~~~~g~~~~~~~~~~~A~~~~VP---V~ 78 (284)
T PRK09195 6 TKQMLNNAQRGGYAVPAFNIHNLETMQVVVETAAELH----SPVIIAGTPGTFSYAGTEYLLAIVSAAAKQYHHP---LA 78 (284)
T ss_pred HHHHHHHHHHcCceEEEEEeCCHHHHHHHHHHHHHhC----CCEEEEcChhHHhhCCHHHHHHHHHHHHHHCCCC---EE
Confidence 5688888888888888888778888887777662111 2233311 1111 11223344466777774 55
Q ss_pred EEEe--cCHhhHHHHHHcCCcEEEEeCC
Q 009774 481 LFVT--DVYQEATAAKAAGLEVVISIRP 506 (526)
Q Consensus 481 l~Vg--Ds~~Di~~A~~aG~~~i~v~~~ 506 (526)
++.+ .++..+..|.++|..+|.++.+
T Consensus 79 lHLDHg~~~e~i~~Ai~~GftSVM~DgS 106 (284)
T PRK09195 79 LHLDHHEKFDDIAQKVRSGVRSVMIDGS 106 (284)
T ss_pred EECCCCCCHHHHHHHHHcCCCEEEeCCC
Confidence 5553 4568999999999999999854
No 367
>PRK00043 thiE thiamine-phosphate pyrophosphorylase; Reviewed
Probab=21.91 E-value=6.3e+02 Score=23.28 Aligned_cols=87 Identities=11% Similarity=0.050 Sum_probs=52.0
Q ss_pred HHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceEE-eCC--cCCCCC------HHHHHHHHHHcCCCCCC
Q 009774 408 PEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF-DTA--VGNKRE------TPSYVEITNSLGVDKPS 478 (526)
Q Consensus 408 ~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i~-~~~--~~~KP~------p~~~~~~~~~l~~~~p~ 478 (526)
...++.++..|..+++.+++..+..+.. + . | .|.+. +.. ...||. .+.+..+.+.++ .-
T Consensus 94 ~~~~~~~~~~~~~~g~~~~t~~e~~~a~-~-~---g----aD~v~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~ 161 (212)
T PRK00043 94 VADARALLGPDAIIGLSTHTLEEAAAAL-A-A---G----ADYVGVGPIFPTPTKKDAKAPQGLEGLREIRAAVG---DI 161 (212)
T ss_pred HHHHHHHcCCCCEEEEeCCCHHHHHHHh-H-c---C----CCEEEECCccCCCCCCCCCCCCCHHHHHHHHHhcC---CC
Confidence 3566677777888898887555543322 2 2 2 33333 111 111221 566777776664 12
Q ss_pred cEEEEe-cCHhhHHHHHHcCCcEEEEeCC
Q 009774 479 EILFVT-DVYQEATAAKAAGLEVVISIRP 506 (526)
Q Consensus 479 ~~l~Vg-Ds~~Di~~A~~aG~~~i~v~~~ 506 (526)
.++..| =+..++..+.++|...+.+.+.
T Consensus 162 ~v~a~GGI~~~~i~~~~~~Ga~gv~~gs~ 190 (212)
T PRK00043 162 PIVAIGGITPENAPEVLEAGADGVAVVSA 190 (212)
T ss_pred CEEEECCcCHHHHHHHHHcCCCEEEEeHH
Confidence 356555 4458999999999999988654
No 368
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=21.54 E-value=98 Score=31.77 Aligned_cols=35 Identities=26% Similarity=0.431 Sum_probs=27.7
Q ss_pred ceeeecCCC-CchHHHHHHHHHHhhCCCCeEEEEcCCcc
Q 009774 173 VVPIIENTA-YENELTDSLAKAIDAYPKATAVLVRNHGI 210 (526)
Q Consensus 173 ~vpv~~~~~-~~~~la~~i~~~l~~~~~~~~vll~nHG~ 210 (526)
.||+++..+ ...++++.|.+++++. -.+.+.|||+
T Consensus 37 ~iPvIDls~~~~~~~~~~l~~Ac~~~---GFf~v~nHGI 72 (337)
T PLN02639 37 NVPVIDLGSPDRAQVVQQIGDACRRY---GFFQVINHGV 72 (337)
T ss_pred CCCeEECCCccHHHHHHHHHHHHHhC---CEEEEEcCCC
Confidence 499998853 4556788888898874 7888999998
No 369
>TIGR02826 RNR_activ_nrdG3 anaerobic ribonucleoside-triphosphate reductase activating protein. Members of this family represent a set of proteins related to, yet architecturally different from, the activating protein for the glycine radical-containing, oxygen-sensitive ribonucleoside-triphosphate reductase (RNR) as described in model TIGR02491. Members of this family are found paired with members of a similarly divergent set of anaerobic ribonucleoside-triphosphate reductases. Identification of this protein as an RNR activitating protein is partly from pairing with a candidate RNR. It is further supported by our finding that upstream of these operons are examples of a conserved regulatory element (described Rodionov and Gelfand) that is found in nearly all bacteria and that occurs specifically upstream of operons for all three classes of RNR genes.
Probab=21.12 E-value=1.2e+02 Score=27.07 Aligned_cols=25 Identities=16% Similarity=0.291 Sum_probs=22.5
Q ss_pred CCHHHHHHHHHHCCCeEEEEeCchH
Q 009774 405 DDVPEALEKWHSLGTKVYIYSSGSR 429 (526)
Q Consensus 405 pgv~~~L~~L~~~G~~l~vvTn~~~ 429 (526)
+++.++++.++++|+++.+.||...
T Consensus 75 ~~l~~ll~~lk~~Gl~i~l~Tg~~~ 99 (147)
T TIGR02826 75 EALLSLLKIFKEKGLKTCLYTGLEP 99 (147)
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCC
Confidence 6788999999999999999999754
No 370
>TIGR02668 moaA_archaeal probable molybdenum cofactor biosynthesis protein A, archaeal. This model describes an archaeal family related, and predicted to be functionally equivalent, to molybdenum cofactor biosynthesis protein A (MoaA) of bacteria (see TIGR02666).
Probab=21.10 E-value=2.5e+02 Score=28.02 Aligned_cols=27 Identities=19% Similarity=0.305 Sum_probs=23.9
Q ss_pred cCCCHHHHHHHHHHCCC-eEEEEeCchH
Q 009774 403 VFDDVPEALEKWHSLGT-KVYIYSSGSR 429 (526)
Q Consensus 403 l~pgv~~~L~~L~~~G~-~l~vvTn~~~ 429 (526)
+.++..++++.+++.|+ .+.+.||+..
T Consensus 69 l~~~l~~iv~~l~~~g~~~v~i~TNG~l 96 (302)
T TIGR02668 69 LRKDLIEIIRRIKDYGIKDVSMTTNGIL 96 (302)
T ss_pred cccCHHHHHHHHHhCCCceEEEEcCchH
Confidence 56889999999999998 8999999964
No 371
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=20.83 E-value=2.5e+02 Score=33.76 Aligned_cols=38 Identities=21% Similarity=0.309 Sum_probs=32.7
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHhhc
Q 009774 402 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNS 439 (526)
Q Consensus 402 ~l~pgv~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l 439 (526)
+|=+||++.++.|++.|+|+-|+|+--.+.+..+--..
T Consensus 651 kLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC 688 (1151)
T KOG0206|consen 651 KLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSC 688 (1151)
T ss_pred hhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhh
Confidence 56699999999999999999999999888776665555
No 372
>cd05710 SIS_1 A subgroup of the SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=20.64 E-value=78 Score=26.90 Aligned_cols=28 Identities=11% Similarity=-0.008 Sum_probs=24.3
Q ss_pred CCCHHHHHHHHHHCCCeEEEEeCchHHH
Q 009774 404 FDDVPEALEKWHSLGTKVYIYSSGSRLA 431 (526)
Q Consensus 404 ~pgv~~~L~~L~~~G~~l~vvTn~~~~~ 431 (526)
-+++.+.++.+|++|.++..+|+.....
T Consensus 60 t~~~~~~~~~a~~~g~~vi~iT~~~~s~ 87 (120)
T cd05710 60 TKETVAAAKFAKEKGATVIGLTDDEDSP 87 (120)
T ss_pred ChHHHHHHHHHHHcCCeEEEEECCCCCc
Confidence 3688899999999999999999987654
No 373
>cd05007 SIS_Etherase N-acetylmuramic acid 6-phosphate etherase. Members of this family contain the SIS (Sugar ISomerase) domain. The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. The bacterial cell wall sugar N-acetylmuramic acid carries a unique D-lactyl ether substituent at the C3 position. The etherase catalyzes the cleavage of the lactyl ether bond of N-acetylmuramic acid 6-phosphate.
Probab=20.43 E-value=8.1e+02 Score=23.93 Aligned_cols=97 Identities=9% Similarity=0.037 Sum_probs=60.1
Q ss_pred HHHHHHHHHCCCeEEEEeCchHHHHH--HHHhhcCCCCcc-cccceEE--eC------CcCCCCCHHHHHHHHHHcCCCC
Q 009774 408 PEALEKWHSLGTKVYIYSSGSRLAQR--LIFGNSNYGDLR-KYLSGFF--DT------AVGNKRETPSYVEITNSLGVDK 476 (526)
Q Consensus 408 ~~~L~~L~~~G~~l~vvTn~~~~~~~--~~l~~l~~~gl~-~~fd~i~--~~------~~~~KP~p~~~~~~~~~l~~~~ 476 (526)
..+.+.|++ |-+++++-++.....- ...+..+..|.. +.+..++ .. ....--+++.+...++..++.
T Consensus 40 ~~~~~~l~~-ggrl~~~GaGtSg~la~~da~e~~~tfg~~~~~v~~~iagg~~a~~~a~~~~edd~~~~~~~l~a~~l~- 117 (257)
T cd05007 40 DAAAERLRA-GGRLIYVGAGTSGRLGVLDASELPPTFGTPPERVVGLIAGGEPALTRAVEGAEDDEEAGAADLQAINLT- 117 (257)
T ss_pred HHHHHHHHc-CCEEEEEcCcHHHHHHHHHHHhccccccCCcccceEEEeCCHHHHHhhccccCChHHHHHHHHHHcCCC-
Confidence 345566665 5578888888775432 112333222442 2344444 11 133455677888888899997
Q ss_pred CCcEEEE----ecCH---hhHHHHHHcCCcEEEEeCC
Q 009774 477 PSEILFV----TDVY---QEATAAKAAGLEVVISIRP 506 (526)
Q Consensus 477 p~~~l~V----gDs~---~Di~~A~~aG~~~i~v~~~ 506 (526)
+++++++ |.++ .=++.|++.|+.+|.+...
T Consensus 118 ~~DvvI~IS~SG~T~~vi~al~~Ak~~Ga~~I~It~~ 154 (257)
T cd05007 118 ERDVVIGIAASGRTPYVLGALRYARARGALTIGIACN 154 (257)
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 8777755 3444 4677889999999999865
No 374
>PLN02580 trehalose-phosphatase
Probab=20.43 E-value=1.6e+02 Score=30.95 Aligned_cols=34 Identities=18% Similarity=0.261 Sum_probs=27.5
Q ss_pred CHHHHHHHHHHcCCCCCCc---EEEEecCHhhHHHHHH
Q 009774 461 ETPSYVEITNSLGVDKPSE---ILFVTDVYQEATAAKA 495 (526)
Q Consensus 461 ~p~~~~~~~~~l~~~~p~~---~l~VgDs~~Di~~A~~ 495 (526)
+-.....+++.++++ ..+ .++|||..+|..+-+.
T Consensus 302 KG~Av~~Ll~~~g~~-~~d~~~pi~iGDD~TDedmF~~ 338 (384)
T PLN02580 302 KGKAVEFLLESLGLS-NCDDVLPIYIGDDRTDEDAFKV 338 (384)
T ss_pred HHHHHHHHHHhcCCC-cccceeEEEECCCchHHHHHHh
Confidence 456788899999996 653 3899999999988775
No 375
>PRK13352 thiamine biosynthesis protein ThiC; Provisional
Probab=20.20 E-value=1.5e+02 Score=31.11 Aligned_cols=52 Identities=19% Similarity=0.178 Sum_probs=40.3
Q ss_pred cCccCCCH-HHHHHHHHHCCCeEEEEeCchHHHHHHHHhhcCCCCcccccceE
Q 009774 400 EGEVFDDV-PEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGF 451 (526)
Q Consensus 400 ~~~l~pgv-~~~L~~L~~~G~~l~vvTn~~~~~~~~~l~~l~~~gl~~~fd~i 451 (526)
...+..|+ .+.++.+++.|..++|||-+.......++.+-....+...||.+
T Consensus 159 fmTiHcGi~~~~~~~~~~~~R~~giVSRGGs~~~~WM~~n~~ENPlye~fD~l 211 (431)
T PRK13352 159 FMTIHCGVTRETLERLKKSGRIMGIVSRGGSFLAAWMLHNNKENPLYEHFDYL 211 (431)
T ss_pred EEEEccchhHHHHHHHHhcCCccCeecCCHHHHHHHHHHcCCcCchHHHHHHH
Confidence 33566774 78999999999999999999999888888776555565656554
No 376
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=20.04 E-value=66 Score=33.61 Aligned_cols=18 Identities=11% Similarity=-0.031 Sum_probs=15.5
Q ss_pred CCceEEEEeccccccccc
Q 009774 282 LFPRCIVLDIEGTTTPIS 299 (526)
Q Consensus 282 ~~ikaVlFD~DGTL~d~~ 299 (526)
..|.+|-||||+||....
T Consensus 25 ~~i~~~GfdmDyTL~~Y~ 42 (424)
T KOG2469|consen 25 ENIGIVGFDMDYTLARYN 42 (424)
T ss_pred hcCcEEeeccccchhhhc
Confidence 469999999999998754
Done!