Query 009775
Match_columns 526
No_of_seqs 118 out of 126
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 12:43:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009775.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009775hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b4t_R RPN7, 26S proteasome re 97.6 0.00034 1.2E-08 73.2 12.3 230 240-518 171-422 (429)
2 4b4t_P 26S proteasome regulato 97.3 0.0022 7.7E-08 67.6 13.2 237 241-520 181-429 (445)
3 4b4t_S RPN3, 26S proteasome re 96.6 0.0016 5.3E-08 70.8 5.6 229 240-518 234-473 (523)
4 3txn_A 26S proteasome regulato 96.5 0.019 6.6E-07 60.2 12.4 207 243-497 145-363 (394)
5 4b4t_Q 26S proteasome regulato 96.4 0.012 4.2E-07 58.0 10.2 233 239-520 177-426 (434)
6 3ulq_A Response regulator aspa 95.9 0.089 3.1E-06 51.6 13.3 236 36-310 9-255 (383)
7 3q15_A PSP28, response regulat 95.8 0.16 5.5E-06 49.9 14.8 238 34-310 6-253 (378)
8 3k9i_A BH0479 protein; putativ 95.3 0.02 7E-07 47.0 5.0 60 239-307 29-89 (117)
9 3ma5_A Tetratricopeptide repea 95.2 0.021 7E-07 46.3 4.8 61 239-308 9-70 (100)
10 4gco_A Protein STI-1; structur 95.1 0.021 7.1E-07 48.5 4.7 58 241-307 51-109 (126)
11 3gyz_A Chaperone protein IPGC; 94.8 0.03 1E-06 49.9 5.0 58 241-307 74-132 (151)
12 2l6j_A TPR repeat-containing p 94.7 0.036 1.2E-06 43.6 4.8 59 240-307 7-66 (111)
13 2xcb_A PCRH, regulatory protei 94.5 0.084 2.9E-06 44.8 7.1 58 241-307 56-114 (142)
14 2vgx_A Chaperone SYCD; alterna 94.4 0.079 2.7E-06 46.0 6.7 58 241-307 59-117 (148)
15 3sz7_A HSC70 cochaperone (SGT) 94.2 0.11 3.9E-06 44.7 7.3 59 240-307 14-73 (164)
16 3rkv_A Putative peptidylprolyl 94.2 0.044 1.5E-06 47.3 4.6 59 240-307 66-125 (162)
17 4ga2_A E3 SUMO-protein ligase 93.9 0.046 1.6E-06 47.5 4.2 57 242-307 36-93 (150)
18 3q49_B STIP1 homology and U bo 93.9 0.19 6.5E-06 41.1 7.7 59 240-307 12-71 (137)
19 3upv_A Heat shock protein STI1 93.9 0.063 2.2E-06 44.0 4.8 60 240-308 41-101 (126)
20 3rkv_A Putative peptidylprolyl 93.7 0.17 5.7E-06 43.5 7.4 102 244-346 18-130 (162)
21 3sz7_A HSC70 cochaperone (SGT) 93.6 0.066 2.2E-06 46.2 4.7 59 240-307 48-107 (164)
22 4gco_A Protein STI-1; structur 93.5 0.08 2.7E-06 44.8 4.9 54 245-307 21-75 (126)
23 3q49_B STIP1 homology and U bo 93.5 0.077 2.6E-06 43.5 4.7 60 240-308 46-106 (137)
24 2fbn_A 70 kDa peptidylprolyl i 93.5 0.28 9.7E-06 43.5 8.8 138 239-385 40-186 (198)
25 2lni_A Stress-induced-phosphop 93.5 0.078 2.7E-06 42.5 4.6 60 239-307 52-112 (133)
26 1elr_A TPR2A-domain of HOP; HO 93.4 0.4 1.4E-05 37.8 8.7 60 240-308 7-67 (131)
27 1hxi_A PEX5, peroxisome target 93.4 0.095 3.2E-06 44.0 5.1 58 240-306 54-112 (121)
28 1na3_A Designed protein CTPR2; 93.3 0.1 3.5E-06 39.5 4.8 59 240-307 12-71 (91)
29 2xev_A YBGF; tetratricopeptide 93.2 0.091 3.1E-06 42.5 4.6 62 240-307 42-104 (129)
30 3t5v_B Nuclear mRNA export pro 93.1 0.6 2.1E-05 49.8 12.0 154 229-392 168-327 (455)
31 2vyi_A SGTA protein; chaperone 92.7 0.52 1.8E-05 37.1 8.4 60 239-307 14-74 (131)
32 4gcn_A Protein STI-1; structur 92.7 0.096 3.3E-06 44.2 4.1 53 246-307 17-70 (127)
33 1elw_A TPR1-domain of HOP; HOP 92.6 0.13 4.3E-06 40.0 4.5 58 240-306 41-99 (118)
34 3vtx_A MAMA; tetratricopeptide 92.5 0.11 3.8E-06 45.0 4.5 59 240-307 110-169 (184)
35 2vyi_A SGTA protein; chaperone 92.5 0.14 4.9E-06 40.4 4.8 60 239-307 48-108 (131)
36 1elw_A TPR1-domain of HOP; HOP 92.5 0.16 5.5E-06 39.4 5.0 59 240-307 7-66 (118)
37 2kat_A Uncharacterized protein 92.5 0.14 4.7E-06 41.4 4.7 60 239-307 21-81 (115)
38 3gyz_A Chaperone protein IPGC; 92.4 0.12 4.2E-06 45.9 4.7 60 239-307 38-98 (151)
39 1a17_A Serine/threonine protei 92.4 0.87 3E-05 37.8 9.7 60 239-307 15-75 (166)
40 2kck_A TPR repeat; tetratricop 92.3 0.11 3.9E-06 40.1 3.9 58 241-307 10-68 (112)
41 2xcb_A PCRH, regulatory protei 92.3 0.33 1.1E-05 41.0 7.1 59 240-307 21-80 (142)
42 2hr2_A Hypothetical protein; a 92.2 0.48 1.6E-05 43.7 8.6 78 229-308 3-86 (159)
43 3upv_A Heat shock protein STI1 92.2 0.16 5.6E-06 41.5 4.9 57 242-307 9-66 (126)
44 2lni_A Stress-induced-phosphop 92.1 0.29 9.8E-06 39.1 6.2 61 238-307 17-78 (133)
45 4gcn_A Protein STI-1; structur 92.0 0.1 3.6E-06 44.0 3.5 65 241-307 46-111 (127)
46 2kck_A TPR repeat; tetratricop 91.8 0.095 3.2E-06 40.5 2.9 60 240-306 43-104 (112)
47 2xev_A YBGF; tetratricopeptide 91.8 0.14 4.6E-06 41.5 3.9 61 241-307 6-67 (129)
48 2fbn_A 70 kDa peptidylprolyl i 91.7 0.18 6.1E-06 44.8 4.9 61 238-307 89-150 (198)
49 4i17_A Hypothetical protein; T 91.4 0.36 1.2E-05 43.4 6.6 60 240-307 10-70 (228)
50 2hr2_A Hypothetical protein; a 91.3 0.13 4.6E-06 47.4 3.8 65 239-308 59-131 (159)
51 2kc7_A BFR218_protein; tetratr 91.2 0.2 6.9E-06 39.0 4.3 58 241-307 4-63 (99)
52 1elr_A TPR2A-domain of HOP; HO 91.2 0.14 4.9E-06 40.5 3.4 66 240-307 41-107 (131)
53 3hym_B Cell division cycle pro 91.1 0.26 8.8E-06 45.7 5.5 69 239-307 195-264 (330)
54 1hh8_A P67PHOX, NCF-2, neutrop 90.9 0.22 7.6E-06 43.9 4.7 60 239-307 39-99 (213)
55 1hh8_A P67PHOX, NCF-2, neutrop 90.9 0.24 8.2E-06 43.7 4.9 69 239-307 73-149 (213)
56 3u3w_A Transcriptional activat 90.8 2 6.7E-05 40.7 11.5 72 235-311 115-187 (293)
57 3t5x_A PCI domain-containing p 90.8 2.1 7.1E-05 40.6 11.5 148 278-466 13-174 (203)
58 2dba_A Smooth muscle cell asso 90.7 0.42 1.4E-05 39.0 5.9 64 238-307 29-93 (148)
59 2dba_A Smooth muscle cell asso 90.4 0.3 1E-05 39.9 4.7 60 239-307 67-127 (148)
60 3uq3_A Heat shock protein STI1 90.4 0.56 1.9E-05 41.7 6.9 59 240-307 142-201 (258)
61 3mkr_A Coatomer subunit epsilo 90.4 0.24 8.1E-06 48.0 4.7 22 241-262 134-155 (291)
62 1a17_A Serine/threonine protei 90.3 0.31 1.1E-05 40.7 4.8 59 240-307 50-109 (166)
63 3ro3_A PINS homolog, G-protein 90.1 0.23 7.7E-06 40.5 3.7 71 238-311 50-121 (164)
64 4eqf_A PEX5-related protein; a 90.0 0.58 2E-05 44.9 7.1 59 240-307 216-275 (365)
65 1xnf_A Lipoprotein NLPI; TPR, 89.9 0.48 1.6E-05 42.9 6.1 60 239-307 45-105 (275)
66 1na0_A Designed protein CTPR3; 89.6 0.95 3.3E-05 35.2 6.9 60 239-307 11-71 (125)
67 3qky_A Outer membrane assembly 89.6 0.35 1.2E-05 44.7 5.0 63 239-307 54-125 (261)
68 1p5q_A FKBP52, FK506-binding p 89.4 0.81 2.8E-05 45.1 7.8 69 240-308 150-225 (336)
69 3as5_A MAMA; tetratricopeptide 89.2 0.8 2.7E-05 38.2 6.5 59 240-307 11-70 (186)
70 2vq2_A PILW, putative fimbrial 89.1 0.87 3E-05 39.5 7.0 60 239-307 115-175 (225)
71 1ufm_A COP9 complex subunit 4; 89.0 0.21 7.1E-06 41.6 2.6 35 429-463 20-54 (84)
72 2qfc_A PLCR protein; TPR, HTH, 88.9 2.6 9E-05 39.8 10.7 66 242-310 120-186 (293)
73 3urz_A Uncharacterized protein 88.9 0.43 1.5E-05 43.2 5.0 56 243-307 60-116 (208)
74 3vtx_A MAMA; tetratricopeptide 88.7 0.55 1.9E-05 40.5 5.3 55 244-307 12-67 (184)
75 1hxi_A PEX5, peroxisome target 88.7 0.45 1.5E-05 39.7 4.6 58 241-307 21-79 (121)
76 1na0_A Designed protein CTPR3; 88.6 0.5 1.7E-05 36.8 4.6 60 239-307 45-105 (125)
77 2vgx_A Chaperone SYCD; alterna 88.6 0.45 1.5E-05 41.2 4.7 59 240-307 24-83 (148)
78 2fo7_A Synthetic consensus TPR 88.3 0.66 2.3E-05 36.3 5.1 59 240-307 38-97 (136)
79 3edt_B KLC 2, kinesin light ch 88.3 0.21 7.2E-06 44.9 2.5 70 239-309 45-115 (283)
80 1xnf_A Lipoprotein NLPI; TPR, 88.3 0.48 1.6E-05 42.9 4.8 59 240-307 80-139 (275)
81 1p5q_A FKBP52, FK506-binding p 88.2 0.41 1.4E-05 47.3 4.7 61 238-307 197-258 (336)
82 4g1t_A Interferon-induced prot 88.1 0.24 8.3E-06 49.3 3.0 64 245-308 59-123 (472)
83 3edt_B KLC 2, kinesin light ch 88.0 0.28 9.4E-06 44.1 3.0 69 239-308 129-198 (283)
84 2vq2_A PILW, putative fimbrial 87.8 0.55 1.9E-05 40.8 4.8 60 239-307 10-70 (225)
85 1kt0_A FKBP51, 51 kDa FK506-bi 87.4 0.47 1.6E-05 49.1 4.7 60 239-307 319-379 (457)
86 1kt0_A FKBP51, 51 kDa FK506-bi 87.3 0.88 3E-05 47.1 6.7 107 239-346 270-384 (457)
87 3ro3_A PINS homolog, G-protein 87.3 0.42 1.4E-05 38.8 3.5 70 239-311 11-81 (164)
88 3qky_A Outer membrane assembly 87.3 0.76 2.6E-05 42.3 5.7 62 240-307 18-80 (261)
89 2fo7_A Synthetic consensus TPR 86.7 0.78 2.7E-05 35.9 4.7 59 240-307 4-63 (136)
90 3nf1_A KLC 1, kinesin light ch 86.6 0.39 1.3E-05 44.1 3.3 71 238-309 154-225 (311)
91 4eqf_A PEX5-related protein; a 86.1 2.7 9.1E-05 40.2 9.0 60 239-307 101-161 (365)
92 3fp2_A TPR repeat-containing p 86.0 5.9 0.0002 39.6 11.8 56 239-303 61-117 (537)
93 3gw4_A Uncharacterized protein 86.0 0.54 1.8E-05 40.7 3.7 70 238-310 108-178 (203)
94 3u3w_A Transcriptional activat 86.0 1 3.5E-05 42.7 5.9 69 239-309 157-226 (293)
95 4i17_A Hypothetical protein; T 85.8 0.71 2.4E-05 41.4 4.5 56 243-307 48-104 (228)
96 2c2l_A CHIP, carboxy terminus 85.8 1 3.5E-05 43.1 5.8 59 241-308 42-101 (281)
97 3nf1_A KLC 1, kinesin light ch 85.7 0.37 1.3E-05 44.2 2.6 71 238-309 28-99 (311)
98 2ho1_A Type 4 fimbrial biogene 85.7 0.89 3E-05 40.8 5.1 59 239-306 143-202 (252)
99 3ieg_A DNAJ homolog subfamily 85.4 1.8 6.2E-05 40.2 7.2 65 239-308 236-301 (359)
100 4b4t_O 26S proteasome regulato 85.3 3.5 0.00012 42.6 10.0 190 238-463 128-331 (393)
101 3ulq_A Response regulator aspa 85.2 1.8 6.1E-05 42.3 7.4 77 233-312 99-176 (383)
102 3u4t_A TPR repeat-containing p 85.2 1.7 5.8E-05 39.3 6.8 59 240-307 6-65 (272)
103 3k9i_A BH0479 protein; putativ 84.9 0.31 1.1E-05 39.8 1.5 52 250-307 3-55 (117)
104 3uq3_A Heat shock protein STI1 84.9 0.87 3E-05 40.4 4.6 60 239-307 175-235 (258)
105 2pl2_A Hypothetical conserved 84.7 0.94 3.2E-05 41.2 4.8 57 241-307 122-179 (217)
106 3u4t_A TPR repeat-containing p 84.7 0.9 3.1E-05 41.2 4.7 63 240-307 40-102 (272)
107 3as5_A MAMA; tetratricopeptide 84.7 0.91 3.1E-05 37.9 4.4 58 241-307 80-138 (186)
108 3gw4_A Uncharacterized protein 84.6 0.76 2.6E-05 39.7 4.0 69 239-310 28-97 (203)
109 2q7f_A YRRB protein; TPR, prot 84.0 1.4 4.9E-05 38.9 5.6 60 239-307 59-119 (243)
110 3hym_B Cell division cycle pro 84.0 1 3.4E-05 41.7 4.7 59 240-307 128-187 (330)
111 2e2e_A Formate-dependent nitri 84.0 3.3 0.00011 35.4 7.8 87 242-344 83-173 (177)
112 1ihg_A Cyclophilin 40; ppiase 83.7 1.1 3.8E-05 45.3 5.3 60 239-307 275-335 (370)
113 3ieg_A DNAJ homolog subfamily 83.7 1.5 5E-05 40.8 5.7 60 239-307 156-216 (359)
114 2ho1_A Type 4 fimbrial biogene 83.6 1.2 4.2E-05 39.9 5.0 62 240-307 108-169 (252)
115 2if4_A ATFKBP42; FKBP-like, al 83.5 0.57 1.9E-05 46.4 3.0 59 239-306 232-291 (338)
116 3cv0_A Peroxisome targeting si 83.1 1.1 3.9E-05 41.2 4.7 60 239-307 208-268 (327)
117 3mkr_A Coatomer subunit epsilo 83.0 1.7 5.7E-05 41.9 6.1 55 240-307 104-158 (291)
118 1fch_A Peroxisomal targeting s 83.0 1.1 3.8E-05 42.4 4.7 59 240-307 101-160 (368)
119 2c2l_A CHIP, carboxy terminus 82.8 1.5 5.2E-05 41.8 5.6 59 240-307 7-66 (281)
120 2yhc_A BAMD, UPF0169 lipoprote 82.7 0.99 3.4E-05 41.1 4.1 62 240-307 7-69 (225)
121 1ihg_A Cyclophilin 40; ppiase 82.6 1.5 5E-05 44.3 5.7 107 239-346 225-340 (370)
122 2gw1_A Mitochondrial precursor 82.4 1 3.5E-05 44.7 4.4 60 239-307 41-101 (514)
123 2pl2_A Hypothetical conserved 82.4 1.5 5.1E-05 39.9 5.1 59 240-307 42-112 (217)
124 2qfc_A PLCR protein; TPR, HTH, 82.3 0.75 2.6E-05 43.6 3.2 69 239-309 157-226 (293)
125 2xpi_A Anaphase-promoting comp 81.3 2.2 7.4E-05 43.7 6.4 102 189-307 119-228 (597)
126 1fch_A Peroxisomal targeting s 81.3 1.5 5E-05 41.6 4.8 59 240-307 220-279 (368)
127 2e2e_A Formate-dependent nitri 81.2 1.8 6E-05 37.2 4.9 60 239-307 46-109 (177)
128 2ifu_A Gamma-SNAP; membrane fu 80.7 2.3 7.8E-05 40.8 6.0 66 240-309 119-185 (307)
129 1qqe_A Vesicular transport pro 80.6 1.3 4.3E-05 42.3 4.1 66 239-306 160-226 (292)
130 4abn_A Tetratricopeptide repea 80.6 7.4 0.00025 40.1 10.2 143 238-393 171-337 (474)
131 2y4t_A DNAJ homolog subfamily 80.1 1.6 5.4E-05 42.8 4.8 28 279-306 94-121 (450)
132 2q7f_A YRRB protein; TPR, prot 80.0 1.6 5.6E-05 38.5 4.4 59 240-307 94-153 (243)
133 2v5f_A Prolyl 4-hydroxylase su 79.9 1.3 4.4E-05 36.3 3.4 67 240-308 8-75 (104)
134 3ro2_A PINS homolog, G-protein 79.7 2.2 7.5E-05 38.9 5.3 66 238-308 6-72 (338)
135 3q15_A PSP28, response regulat 79.3 3.1 0.00011 40.7 6.6 77 232-311 96-173 (378)
136 2y4t_A DNAJ homolog subfamily 79.2 1.8 6.1E-05 42.4 4.8 58 239-305 28-86 (450)
137 3ro2_A PINS homolog, G-protein 79.1 1.3 4.3E-05 40.5 3.4 69 240-311 46-115 (338)
138 3cv0_A Peroxisome targeting si 78.5 1.9 6.6E-05 39.7 4.5 60 239-307 174-234 (327)
139 2vsy_A XCC0866; transferase, g 78.4 7 0.00024 40.7 9.3 60 239-307 25-85 (568)
140 4a1s_A PINS, partner of inscut 77.7 1.8 6.1E-05 42.0 4.2 67 237-308 48-115 (411)
141 4abn_A Tetratricopeptide repea 77.4 12 0.00042 38.4 10.7 58 241-307 106-165 (474)
142 2r5s_A Uncharacterized protein 77.4 2.1 7.2E-05 37.2 4.2 68 239-306 42-135 (176)
143 2h6f_A Protein farnesyltransfe 77.3 1.4 4.7E-05 45.1 3.4 58 241-307 135-194 (382)
144 2gw1_A Mitochondrial precursor 77.2 4.9 0.00017 39.7 7.3 61 239-308 340-401 (514)
145 3fp2_A TPR repeat-containing p 76.6 11 0.00036 37.7 9.7 61 239-308 346-407 (537)
146 3urz_A Uncharacterized protein 76.1 2.2 7.4E-05 38.5 4.1 68 240-307 7-82 (208)
147 3qou_A Protein YBBN; thioredox 75.2 3 0.0001 39.7 5.1 69 239-307 153-247 (287)
148 2xpi_A Anaphase-promoting comp 75.2 5.4 0.00019 40.7 7.2 57 238-303 118-174 (597)
149 1wao_1 Serine/threonine protei 75.0 3 0.0001 43.5 5.3 59 240-307 43-102 (477)
150 3sf4_A G-protein-signaling mod 74.7 3 0.0001 39.7 4.8 65 239-308 11-76 (406)
151 4a1s_A PINS, partner of inscut 74.2 1.6 5.6E-05 42.2 2.9 69 238-309 264-333 (411)
152 2vsy_A XCC0866; transferase, g 74.1 4.1 0.00014 42.4 6.1 59 240-307 60-119 (568)
153 2ifu_A Gamma-SNAP; membrane fu 73.4 1.5 5.1E-05 42.1 2.3 66 238-306 156-222 (307)
154 3sf4_A G-protein-signaling mod 73.2 5 0.00017 38.1 6.0 70 239-311 129-219 (406)
155 2h6f_A Protein farnesyltransfe 72.7 1.5 5.1E-05 44.8 2.3 56 243-307 172-228 (382)
156 2pzi_A Probable serine/threoni 72.5 2.6 9E-05 45.9 4.3 59 240-307 436-495 (681)
157 4ga2_A E3 SUMO-protein ligase 72.4 1.9 6.6E-05 37.0 2.6 53 242-303 70-123 (150)
158 1w3b_A UDP-N-acetylglucosamine 72.3 4 0.00014 39.4 5.1 56 242-306 242-298 (388)
159 2r5s_A Uncharacterized protein 70.2 4.2 0.00014 35.2 4.4 62 240-308 111-173 (176)
160 4gyw_A UDP-N-acetylglucosamine 69.7 3.7 0.00013 45.8 4.7 35 457-491 329-365 (723)
161 4gyw_A UDP-N-acetylglucosamine 69.6 3.6 0.00012 45.8 4.7 59 240-307 80-139 (723)
162 1w3b_A UDP-N-acetylglucosamine 68.7 2.8 9.6E-05 40.5 3.1 58 240-306 70-128 (388)
163 1qqe_A Vesicular transport pro 67.3 2.8 9.7E-05 39.8 2.8 65 240-307 120-186 (292)
164 3bee_A Putative YFRE protein; 66.9 4.2 0.00014 33.2 3.4 54 245-307 14-71 (93)
165 1zu2_A Mitochondrial import re 66.8 5.1 0.00017 36.8 4.3 48 251-307 60-119 (158)
166 3ma5_A Tetratricopeptide repea 65.9 4.6 0.00016 32.1 3.4 30 278-307 6-35 (100)
167 2yhc_A BAMD, UPF0169 lipoprote 65.2 6.5 0.00022 35.6 4.7 61 240-306 44-123 (225)
168 2ond_A Cleavage stimulation fa 64.7 20 0.00068 34.0 8.3 129 239-387 136-268 (308)
169 1pc2_A Mitochondria fission pr 64.1 2.7 9.3E-05 38.5 1.9 51 250-307 48-99 (152)
170 4f3v_A ESX-1 secretion system 63.9 7.2 0.00025 38.9 5.1 54 241-303 106-159 (282)
171 4g1t_A Interferon-induced prot 62.4 5.2 0.00018 39.5 3.8 65 242-307 99-166 (472)
172 1ouv_A Conserved hypothetical 59.7 8.1 0.00028 35.4 4.3 56 241-306 10-69 (273)
173 2l6j_A TPR repeat-containing p 59.2 29 0.00098 26.4 6.9 29 279-307 4-32 (111)
174 1na3_A Designed protein CTPR2; 57.5 13 0.00044 27.4 4.4 32 276-307 6-37 (91)
175 3qww_A SET and MYND domain-con 57.1 5.2 0.00018 41.9 2.8 69 239-308 342-411 (433)
176 1ouv_A Conserved hypothetical 56.5 9.9 0.00034 34.8 4.3 47 250-307 55-106 (273)
177 2if4_A ATFKBP42; FKBP-like, al 56.4 4.6 0.00016 39.8 2.1 66 242-307 184-258 (338)
178 1hz4_A MALT regulatory protein 56.2 5.7 0.00019 38.2 2.7 68 239-309 55-123 (373)
179 1wao_1 Serine/threonine protei 55.7 5.2 0.00018 41.7 2.5 53 246-307 15-68 (477)
180 3n71_A Histone lysine methyltr 54.4 6 0.00021 42.1 2.8 69 239-308 353-422 (490)
181 1hz4_A MALT regulatory protein 53.7 8.2 0.00028 37.0 3.4 70 238-308 94-164 (373)
182 3qwp_A SET and MYND domain-con 49.0 10 0.00035 39.4 3.4 117 183-309 282-401 (429)
183 1fc3_A SPO0A; response regulat 48.6 17 0.00059 32.0 4.3 52 323-386 41-92 (120)
184 4f3v_A ESX-1 secretion system 47.6 20 0.00068 35.7 5.1 55 246-306 144-198 (282)
185 3qww_A SET and MYND domain-con 47.2 24 0.00082 36.8 5.9 64 244-308 305-369 (433)
186 2kat_A Uncharacterized protein 45.2 18 0.00061 28.6 3.7 29 279-307 19-47 (115)
187 2ond_A Cleavage stimulation fa 44.2 70 0.0024 30.1 8.3 127 240-388 102-231 (308)
188 4b4t_Q 26S proteasome regulato 42.1 20 0.00067 34.9 4.1 66 240-308 138-204 (434)
189 1xn7_A Hypothetical protein YH 41.9 24 0.00081 28.6 3.9 43 426-468 3-45 (78)
190 1wdp_A Beta-amylase; (beta/alp 40.9 14 0.00049 39.8 3.0 30 121-151 68-116 (495)
191 2xfr_A Beta-amylase; hydrolase 40.4 15 0.0005 40.0 3.0 30 121-151 66-114 (535)
192 3qwp_A SET and MYND domain-con 39.2 38 0.0013 35.1 5.9 58 249-307 299-357 (429)
193 2ooe_A Cleavage stimulation fa 37.8 73 0.0025 32.5 7.8 30 35-64 42-71 (530)
194 2pzi_A Probable serine/threoni 37.8 36 0.0012 36.9 5.7 57 248-307 402-461 (681)
195 3n71_A Histone lysine methyltr 36.8 96 0.0033 32.8 8.7 102 241-345 313-430 (490)
196 1fa2_A Beta-amylase; TIM barre 36.5 16 0.00054 39.5 2.5 30 121-151 69-117 (498)
197 2k02_A Ferrous iron transport 33.3 31 0.001 28.7 3.3 42 426-467 3-44 (87)
198 1nzn_A CGI-135 protein, fissio 31.4 35 0.0012 30.2 3.5 52 250-307 51-102 (126)
199 3qou_A Protein YBBN; thioredox 31.3 20 0.0007 33.9 2.2 58 240-306 120-178 (287)
200 3mkr_B Coatomer subunit alpha; 30.2 22 0.00076 36.3 2.3 28 282-309 105-132 (320)
201 2vxg_A LD41624, GE-1, CG6181-P 30.1 29 0.00099 31.3 2.8 43 351-396 5-50 (139)
202 3hug_A RNA polymerase sigma fa 28.7 1.1E+02 0.0039 24.2 6.0 43 428-470 40-84 (92)
203 2rpa_A Katanin P60 ATPase-cont 28.1 22 0.00076 29.2 1.5 18 241-258 16-33 (78)
204 3mv2_B Coatomer subunit epsilo 27.5 63 0.0022 32.5 5.1 61 237-304 100-161 (310)
205 2kc7_A BFR218_protein; tetratr 26.9 55 0.0019 24.7 3.6 26 282-307 3-28 (99)
206 2wpv_A GET4, UPF0363 protein Y 22.3 47 0.0016 33.5 3.0 44 35-82 9-52 (312)
No 1
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.61 E-value=0.00034 Score=73.21 Aligned_cols=230 Identities=15% Similarity=0.212 Sum_probs=124.9
Q ss_pred HHHHHHHHhhcccHHHHhhhccCccc--CCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhccccc
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQPIDI--TQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLYIYKTKQYHQ 317 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~Idl--~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~yi~r~k~~~~ 317 (526)
+.+++|+....||+..|.+.++-+.- .+. ..+.-...+-.+.|-.+|..|+|.+|.+.|..++.. +..
T Consensus 171 ~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~----~d~~~~~~lk~~~gl~~l~~r~f~~Aa~~f~e~~~t------~~~ 240 (429)
T 4b4t_R 171 MLTIARLGFFYNDQLYVKEKLEAVNSMIEKG----GDWERRNRYKTYYGIHCLAVRNFKEAAKLLVDSLAT------FTS 240 (429)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHTTC----CCTHHHHHHHHHHHHGGGGTSCHHHHHHHHHHHHHH------SCC
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHhhhcC----CCHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHhcc------CCc
Confidence 57789999999999999988777642 111 123444567788999999999999999999887642 211
Q ss_pred CChhHHHHhhHHHHHHHHHHHHHhhCCCCc-----chhh-HHHHHHH-HH----hhHHHHHhhccChhhhcchHhhhhhc
Q 009775 318 KSPQYEQILKKNEQMYALLAICLSLCPQVK-----HVEE-TVNSQLR-EK----YGEKMIRMQRYDDEAFSIYDELFSYA 386 (526)
Q Consensus 318 ks~q~d~i~K~~eqMyaLlAIc~~l~P~~~-----~lDe-~I~~~lr-Ek----y~dk~~kmq~Gd~e~f~~~~elF~~a 386 (526)
.+.+....--+|.+ +|..+++.+. .++. .+...+. +. ..+-+..+..++...| .+.....
T Consensus 241 ----~e~~~~~~~~~y~~--l~al~~~~r~~l~~~v~~~~~~~~~l~~~p~~~~~~~l~~~~~~~~~~~~---~~~~l~~ 311 (429)
T 4b4t_R 241 ----IELTSYESIATYAS--VTGLFTLERTDLKSKVIDSPELLSLISTTAALQSISSLTISLYASDYASY---FPYLLET 311 (429)
T ss_dssp ----SCHHHHHHHHHHHH--HHHHHTTCHHHHHHSSSSSHHHHHGGGSHHHHHHHHHHHHHHHHTCHHHH---HHHHHHH
T ss_pred ----cchhhHHHHHHHHH--HHHHhcCCHHHHHHHHhcCHHHHhhccCChhHHHHHHHHHHHHhccHHHH---HHHHHHH
Confidence 12222222233333 3433444331 1221 1112111 00 1111333444454444 4444455
Q ss_pred CCCcccCCCCCCCCCcCCcchHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccccChhHHhcccCCChhHHHHHHHHHhhc
Q 009775 387 CPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRSFLKVYSSLYLSELATYMEVDEPTLRTILMTYKHK 466 (526)
Q Consensus 387 cPKFIsp~~P~~~~~~~n~~~e~~~~Ql~~Fl~eV~~q~~l~~lRsyLKLYtti~l~KLAsfldvd~~~lr~~Ll~~K~k 466 (526)
++.++... | |..+ +...|.++|.. ..++.|++.|++|+++.||..++++++.+...|..+=.
T Consensus 312 ~~~~l~~d-~-~l~~-----------h~~~l~~~ir~----~~l~q~~~~Ys~I~l~~mA~~l~~s~~~~E~~L~~lI~- 373 (429)
T 4b4t_R 312 YANVLIPC-K-YLNR-----------HADFFVREMRR----KVYAQLLESYKTLSLKSMASAFGVSVAFLDNDLGKFIP- 373 (429)
T ss_dssp HSTTTTTC-T-TSTT-----------THHHHHHHHHH----HHHHHHHHTCSEEEHHHHHHHHTSCHHHHHHHHHHHHH-
T ss_pred HHhhhccC-H-HHHH-----------HHHHHHHHHHH----HHHHHHhHHhceeeHHHHHHHhCcCHHHHHHHHHHHHH-
Confidence 55555542 1 2222 23445555544 56889999999999999999999999999887766543
Q ss_pred ccccccCCceeccCceeEEEe--CCeEEEecccc-cchh------HhHHHHHHHHHHHHHH
Q 009775 467 THAVDSDGKITSNADVDFYID--DNMIHVVESKP-VKRY------GDFFLRQIAKLEGLIN 518 (526)
Q Consensus 467 ~r~l~~~G~~~~~sdlDF~Id--~dmIhI~e~k~-~r~~------~d~Fir~i~k~~~~~~ 518 (526)
.+-|+.-|| +++|+...... ...| ||-++..|+|+..+++
T Consensus 374 ------------~g~l~akID~~~giv~~~~~d~~~~~y~~~i~~gd~Ll~riqkl~~~i~ 422 (429)
T 4b4t_R 374 ------------NKQLNCVIDRVNGIVETNRPDNKNAQYHLLVKQGDGLLTKLQKYGAAVR 422 (429)
T ss_dssp ------------HTSSCEEEETTTTEEEECC------------------------------
T ss_pred ------------cCCeEEEEcCCCCEEEECCCCchhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344688888 56888766533 3333 5667777777766654
No 2
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.26 E-value=0.0022 Score=67.57 Aligned_cols=237 Identities=11% Similarity=0.161 Sum_probs=124.0
Q ss_pred HHHHHHHhhcccHHHHhhhccCcccCCccccc--ccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhcccccC
Q 009775 241 VGLLRVHCLLGDYHTGLKCLQPIDITQQGVYT--SVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLYIYKTKQYHQK 318 (526)
Q Consensus 241 IGLlRvh~LLGDY~~ALk~L~~Idl~~k~l~~--~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~yi~r~k~~~~k 318 (526)
+-.+|++...|||..|-..+.-|-.. .++ ..|.-....+.+.|--++-=|+|.+|-+.|..++-... . ..
T Consensus 181 l~q~rl~l~~~d~~~a~~~~~ki~~~---~~~~~~~~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~~~----~-~~ 252 (445)
T 4b4t_P 181 LEQMELSILKGDYSQATVLSRKILKK---TFKNPKYESLKLEYYNLLVKISLHKREYLEVAQYLQEIYQTDA----I-KS 252 (445)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHH---HHHSSCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH----H-HS
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHh---hcccCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhccc----c-cC
Confidence 44789999999999998777665321 111 23456677888889999999999999999999874211 0 00
Q ss_pred ChhHHHHhhHHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHhhHHHHH-------hhccChhhhcchHhhhhhcCCCcc
Q 009775 319 SPQYEQILKKNEQMYALLAICLSLCPQVKHVEETVNSQLREKYGEKMIR-------MQRYDDEAFSIYDELFSYACPKFI 391 (526)
Q Consensus 319 s~q~d~i~K~~eqMyaLlAIc~~l~P~~~~lDe~I~~~lrEky~dk~~k-------mq~Gd~e~f~~~~elF~~acPKFI 391 (526)
|. .+.......+.+|..|.|....-+.-++...+++...++.. ...++...|+.+.+.|. +++
T Consensus 253 ----d~--~~~~~~L~~~v~~~iLa~~~~~~~~ll~~~~~~~~~~~l~~~~~L~k~f~~~~L~~~~~~~~~~~----~~L 322 (445)
T 4b4t_P 253 ----DE--AKWKPVLSHIVYFLVLSPYGNLQNDLIHKIQNDNNLKKLESQESLVKLFTTNELMRWPIVQKTYE----PVL 322 (445)
T ss_dssp ----CH--HHHHHHHHHHHHHHHHSSCSSTTHHHHHSHHHHSSCHHHHHHHHHHHHHHHCCSSSHHHHHHHTC----SST
T ss_pred ----CH--HHHHHHHHHHHHHHHhCCCCchHHHHHHHHhhcccccccHHHHHHHHHHHhchHhhhHHHHHHHH----HHh
Confidence 11 12233445556677788732212223333333333333322 34556666633233332 244
Q ss_pred cCCCCCCCCCcCCcchHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccccChhHHhcccCCChhHHHHHHHHHhhcccccc
Q 009775 392 TPSAPSFEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRSFLKVYSSLYLSELATYMEVDEPTLRTILMTYKHKTHAVD 471 (526)
Q Consensus 392 sp~~P~~~~~~~n~~~e~~~~Ql~~Fl~eV~~q~~l~~lRsyLKLYtti~l~KLAsfldvd~~~lr~~Ll~~K~k~r~l~ 471 (526)
.+.+....+.. ...++..+.+.|.. -+|+...|.|++|+++.||.+++++++++...|..+=.-.+
T Consensus 323 ~~~~~~~~~~~-------~~~~~~~L~~~v~e----hnl~~i~k~Ys~I~l~~la~lL~l~~~evE~~ls~mI~~g~--- 388 (445)
T 4b4t_P 323 NEDDLAFGGEA-------NKHHWEDLQKRVIE----HNLRVISEYYSRITLLRLNELLDLTESQTETYISDLVNQGI--- 388 (445)
T ss_dssp TTCCSSCCCSC-------SSHHHHHHHHHHHH----HHHHHHHHHEEEEEHHHHHHHHTSCHHHHHHHHHHHHHHTS---
T ss_pred cccchhhhcch-------hhHHHHHHHHHHHH----HHHHHHHHHhceeeHHHHHHHhCcCHHHHHHHHHHHHHCCC---
Confidence 44322211111 12344445555544 46899999999999999999999999998777654433322
Q ss_pred cCCceeccCceeEEEe--CCeEEEeccccc-chhHhHHHHHHHHHHHHHHhc
Q 009775 472 SDGKITSNADVDFYID--DNMIHVVESKPV-KRYGDFFLRQIAKLEGLINDL 520 (526)
Q Consensus 472 ~~G~~~~~sdlDF~Id--~dmIhI~e~k~~-r~~~d~Fir~i~k~~~~~~~l 520 (526)
++--|| .++||....+.. ..+.+| ..+|.++-+.++.+
T Consensus 389 ----------i~akIDq~~giV~F~~~~~~~~~l~~W-~~~i~~l~~~v~k~ 429 (445)
T 4b4t_P 389 ----------IYAKVNRPAKIVNFEKPKNSSQLLNEW-SHNVDELLEHIETI 429 (445)
T ss_dssp ----------SCCEEETTTTEEEC----------------------------
T ss_pred ----------EEEEEcCCCCEEEECCCCChHHHHHHH-HHHHHHHHHHHHHH
Confidence 334455 346776655432 334443 45555554444433
No 3
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.65 E-value=0.0016 Score=70.84 Aligned_cols=229 Identities=14% Similarity=0.179 Sum_probs=119.8
Q ss_pred HHHHHHHHhhcccHHHHhhhccCcccCCcccccccc-cceehHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhcccccC
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQPIDITQQGVYTSVI-GSHITTIYHYGFANLMLRRYVDAIREFNKILLYIYKTKQYHQK 318 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~Idl~~k~l~~~V~-~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~yi~r~k~~~~k 318 (526)
+..|||.+..-++|.+|.+.++...+-.. .++ .=+++.+||+|-.++.-++|.+|-+.|...+- +
T Consensus 234 ~nllLRnYL~~~~y~qA~~lvsk~~fP~~----~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~r----------k 299 (523)
T 4b4t_S 234 INLILRDFLNNGEVDSASDFISKLEYPHT----DVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIR----------K 299 (523)
T ss_dssp HHHHHHHHHHSSCSTTHHHHHHHHCSCTT----TSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTS----------S
T ss_pred HHHHHHHHHccCcHHHHHHHHhcCcCCcc----cCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH----------h
Confidence 46899999999999999999998765321 122 23489999999999999999999998887651 2
Q ss_pred ChhHHHHhhHHHHHHHHHHHH---HhhCCCCcchhhHH-HHHHHHHhhHHHHHhhccChhhhcchHhhhhhcCCCcccCC
Q 009775 319 SPQYEQILKKNEQMYALLAIC---LSLCPQVKHVEETV-NSQLREKYGEKMIRMQRYDDEAFSIYDELFSYACPKFITPS 394 (526)
Q Consensus 319 s~q~d~i~K~~eqMyaLlAIc---~~l~P~~~~lDe~I-~~~lrEky~dk~~kmq~Gd~e~f~~~~elF~~acPKFIsp~ 394 (526)
+++...-++.-...+.++.+| ++=-|.+..+.... ...| .-|.+=-...+.||.+.| ++....-...|+.=.
T Consensus 300 ap~~~~a~gfr~~a~K~lI~V~LLlG~iP~r~lf~q~~l~~~L-~pY~~Lv~Avr~GdL~~F---~~~L~~h~~~F~~Dg 375 (523)
T 4b4t_S 300 APHNSKSLGFLQQSNKLHCCIQLLMGDIPELSFFHQSNMQKSL-LPYYHLTKAVKLGDLKKF---TSTITKYKQLLLKDD 375 (523)
T ss_dssp CSCSSSCSHHHHHHHHHHHHHHHHHTCCCCHHHHTTTSCHHHH-HHHHHHHHHHHHTCHHHH---HHHHHHTHHHHHHTT
T ss_pred CCcchhhhhHHHHHHHHHHhHHhhcCCCCChHHhhchhHHHHH-HHHHHHHHHHHcCCHHHH---HHHHHHhcceeccCC
Confidence 222221222223333344444 44445431111111 1111 237776677899999999 777666666566531
Q ss_pred CCCCCCCcCCcchHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccccChhHHhcccCCC-hhHHHHHHHHHhhcccccccC
Q 009775 395 APSFEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRSFLKVYSSLYLSELATYMEVD-EPTLRTILMTYKHKTHAVDSD 473 (526)
Q Consensus 395 ~P~~~~~~~n~~~e~~~~Ql~~Fl~eV~~q~~l~~lRsyLKLYtti~l~KLAsfldvd-~~~lr~~Ll~~K~k~r~l~~~ 473 (526)
+| ...+.+.+.-.=..||.--+.|++|+++.+|.-++++ +++....+ .|.-. +
T Consensus 376 --ty-----------------~LI~rLr~~vir~~irkis~~YsrIsL~dIa~kL~L~s~eeaE~iV--AkmI~-----d 429 (523)
T 4b4t_S 376 --TY-----------------QLCVRLRSNVIKTGIRIISLTYKKISLRDICLKLNLDSEQTVEYMV--SRAIR-----D 429 (523)
T ss_dssp --CT-----------------HHHHHHHHHHHHHHHHHSCCCSSEECHHHHHHHHHHHHSSCHHHHH--HHHHH-----H
T ss_pred --hh-----------------HHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHhCCCCHHHHHHHH--HHHHH-----c
Confidence 10 1112222222223566667789999999999888764 33332222 22211 1
Q ss_pred CceeccCceeEEEe--CCeEEEecccc---cchhHhHHHHHHHHHHHHHH
Q 009775 474 GKITSNADVDFYID--DNMIHVVESKP---VKRYGDFFLRQIAKLEGLIN 518 (526)
Q Consensus 474 G~~~~~sdlDF~Id--~dmIhI~e~k~---~r~~~d~Fir~i~k~~~~~~ 518 (526)
| -|+=+|| +.+|.-+|..- .+.-..-|-+.|..|-++-+
T Consensus 430 G------~I~A~Idh~~g~v~ske~~d~yst~ep~~af~~RI~~cl~L~n 473 (523)
T 4b4t_S 430 G------VIEAKINHEDGFIETTELLNIYDSEDPQQVFDERIKFANQLHD 473 (523)
T ss_dssp T------SSCCEECTTTCCEECCSSSCC----------------------
T ss_pred C------CceEEEecCCCEEEeCccccccccHHHHHHHHHHHHHHHHHHH
Confidence 2 2333444 23444433321 22234457777777777644
No 4
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=96.48 E-value=0.019 Score=60.19 Aligned_cols=207 Identities=13% Similarity=0.138 Sum_probs=117.6
Q ss_pred HHHHHhhcccHHHHhhhccCcccCCcccccccccceehHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHhhcccc-cCCh
Q 009775 243 LLRVHCLLGDYHTGLKCLQPIDITQQGVYTSVIGSHITTIYHYGFANL-MLRRYVDAIREFNKILLYIYKTKQYH-QKSP 320 (526)
Q Consensus 243 LlRvh~LLGDY~~ALk~L~~Idl~~k~l~~~V~~c~Vs~~YyvGFaYl-MlrRY~DAir~F~~iL~yi~r~k~~~-~ks~ 320 (526)
-.|++.-+||+..|-..+..-.=..-++| .-|.-+=.+-.+.|-.+| ..|+|..|-..|...+ +.|. ..++
T Consensus 145 e~~~~~~~~n~~k~k~~l~~a~~~~~ai~-~~p~i~a~i~~~~Gi~~l~~~rdyk~A~~~F~eaf------~~f~~~~~~ 217 (394)
T 3txn_A 145 ESKTYHALSNLPKARAALTSARTTANAIY-CPPKVQGALDLQSGILHAADERDFKTAFSYFYEAF------EGFDSVDSV 217 (394)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHSC-CCHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHH------HHHTTTCHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHhhhccCC-CCHHHHHHHHHHhhHHHHHhccCHHHHHHHHHHHH------hcccccccH
Confidence 45677777886555433322110001111 112234456678999999 9999999999999874 2333 2222
Q ss_pred hHHHHhhHHHHHHHHHHHHHhhCCCCcchhhHHHHHHHH--------HhhHHHHHhhccChhhhcchHhhhhhcCCCccc
Q 009775 321 QYEQILKKNEQMYALLAICLSLCPQVKHVEETVNSQLRE--------KYGEKMIRMQRYDDEAFSIYDELFSYACPKFIT 392 (526)
Q Consensus 321 q~d~i~K~~eqMyaLlAIc~~l~P~~~~lDe~I~~~lrE--------ky~dk~~kmq~Gd~e~f~~~~elF~~acPKFIs 392 (526)
+. .+...-+.+|..++-.+.-+.+-+.+...- .+.+=+.....||...| .++.....|.|.
T Consensus 218 ~~-------~~~lkYlvL~aLl~~~r~el~~~l~~~~~~~~~~pei~~l~~L~~a~~~~dl~~f---~~iL~~~~~~l~- 286 (394)
T 3txn_A 218 KA-------LTSLKYMLLCKIMLGQSDDVNQLVSGKLAITYSGRDIDAMKSVAEASHKRSLADF---QAALKEYKKELA- 286 (394)
T ss_dssp HH-------HHHHHHHHHHHHHTTCGGGHHHHHHSHHHHTTCSHHHHHHHHHHHHHHTTCHHHH---HHHHHHSTTTTT-
T ss_pred HH-------HHHHHHHHHHHHHcCCHHHHHHHhccccccccCCccHHHHHHHHHHHHhCCHHHH---HHHHHHHHHHHh-
Confidence 22 222222334444432221133322222111 12223334566787777 666665544332
Q ss_pred CCCCCCCCCcCCcchHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccccChhHHhcccCCChhHHHHHHHHHhhccccccc
Q 009775 393 PSAPSFEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRSFLKVYSSLYLSELATYMEVDEPTLRTILMTYKHKTHAVDS 472 (526)
Q Consensus 393 p~~P~~~~~~~n~~~e~~~~Ql~~Fl~eV~~q~~l~~lRsyLKLYtti~l~KLAsfldvd~~~lr~~Ll~~K~k~r~l~~ 472 (526)
.|++- +...+.+.+......|+.+++-|++|+++.+|..++++++++...|+.+=.
T Consensus 287 --------------~D~~l---~~h~~~L~~~Ir~~~L~~i~~pYsrIsl~~iA~~l~ls~~evE~~L~~lI~------- 342 (394)
T 3txn_A 287 --------------EDVIV---QAHLGTLYDTMLEQNLCRIIEPYSRVQVAHVAESIQLPMPQVEKKLSQMIL------- 342 (394)
T ss_dssp --------------TSHHH---HHHHHHHHHHHHHHHHHHHHTTCSEEEHHHHHHHHTCCHHHHHHHHHHHHH-------
T ss_pred --------------cChHH---HHHHHHHHHHHHHHHHHHHhHhhceeeHHHHHHHHCcCHHHHHHHHHHHHH-------
Confidence 23332 222344444555567888899999999999999999999999887765533
Q ss_pred CCceeccCceeEEEe--CCeEEEeccc
Q 009775 473 DGKITSNADVDFYID--DNMIHVVESK 497 (526)
Q Consensus 473 ~G~~~~~sdlDF~Id--~dmIhI~e~k 497 (526)
.+-|+-.|| +.+|++.+..
T Consensus 343 ------dg~I~a~IDq~~giv~~~~~~ 363 (394)
T 3txn_A 343 ------DKKFSGILDQGEGVLIVFEET 363 (394)
T ss_dssp ------TTSSCEEEETTTTEEEECCC-
T ss_pred ------CCCeeEEEcCCCCEEEECCCc
Confidence 334677788 4688887764
No 5
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.45 E-value=0.012 Score=58.03 Aligned_cols=233 Identities=12% Similarity=0.103 Sum_probs=113.7
Q ss_pred HHHHHHHHHhhcccHHHHhhhccCcccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhcccccC
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQPIDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLYIYKTKQYHQK 318 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~yi~r~k~~~~k 318 (526)
+++.+.|++..+|||..|...++..--...+++ ..+...-.++...|-.|+-.+.|.+|.+.|..++-........
T Consensus 177 ~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~y~~A~~~~~~a~~~~~~~~~~--- 252 (434)
T 4b4t_Q 177 VHLLESKVYHKLRNLAKSKASLTAARTAANSIY-CPTQTVAELDLMSGILHCEDKDYKTAFSYFFESFESYHNLTTH--- 252 (434)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSC-CCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHHTTTS---
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCC-CchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhhhh---
Confidence 467788999999999999988765321111111 0123345677888999999999999999999988643222211
Q ss_pred ChhHHHHhhHHHHHHHHHHHHHhhCCCCcchhhHHHHHHH-------------HHhhHHHHHhhccChhhhcchHhhhhh
Q 009775 319 SPQYEQILKKNEQMYALLAICLSLCPQVKHVEETVNSQLR-------------EKYGEKMIRMQRYDDEAFSIYDELFSY 385 (526)
Q Consensus 319 s~q~d~i~K~~eqMyaLlAIc~~l~P~~~~lDe~I~~~lr-------------Eky~dk~~kmq~Gd~e~f~~~~elF~~ 385 (526)
... ...-+.....++|..+.+.. +.....+. ..+.+-......++...| ++....
T Consensus 253 ~~~-----~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~---~~~~~~ 320 (434)
T 4b4t_Q 253 NSY-----EKACQVLKYMLLSKIMLNLI----DDVKNILNAKYTKETYQSRGIDAMKAVAEAYNNRSLLDF---NTALKQ 320 (434)
T ss_dssp SCH-----HHHHHHHHHHHHHHHHHTCH----HHHHHHHHCSSSSTTCCCHHHHHHHHHHHHHHHTCHHHH---HHHHHH
T ss_pred hhH-----HHHHHHHHHHHHHHHhccch----hHHHhHHHHHHHHHHhcchhhhHHHHHHHHHHhhhHHHH---HHHHHH
Confidence 000 11222333344444444421 11111110 011122222334444444 333322
Q ss_pred cCCCcccCCCCCCCCCcCCcchHH-HHHHHHHHHHHHHHhhhhhhhhhhhhhccccChhHHhcccCCChhHHHHHHHHHh
Q 009775 386 ACPKFITPSAPSFEEPLVNYNQDA-YRLQLKLFLYEVKQQQLLSGVRSFLKVYSSLYLSELATYMEVDEPTLRTILMTYK 464 (526)
Q Consensus 386 acPKFIsp~~P~~~~~~~n~~~e~-~~~Ql~~Fl~eV~~q~~l~~lRsyLKLYtti~l~KLAsfldvd~~~lr~~Ll~~K 464 (526)
..+ .+. .++ ...++..+...| ....++.+.+-|++|+++.+|..++++++++...|..+
T Consensus 321 ~~~-~~~--------------~~~~~~~~~~~l~~~~----~~~~l~~~~~~y~~i~l~~la~~l~~~~~~~E~~l~~l- 380 (434)
T 4b4t_Q 321 YEK-ELM--------------GDELTRSHFNALYDTL----LESNLCKIIEPFECVEISHISKIIGLDTQQVEGKLSQM- 380 (434)
T ss_dssp THH-HHT--------------CSHHHHHHHHHHHHHH----HHHHHHHHHSSCSCEEHHHHHHHHTCCHHHHHHHHHHH-
T ss_pred HHH-HHc--------------ccHHHHHHHHHHHHHH----HHHHHHHHHHHHHhcCHHHHHHHhCcCHHHHHHHHHHH-
Confidence 221 111 112 122334444444 44578899999999999999999999999887665432
Q ss_pred hcccccccCCceeccCceeEEEe--CCeEEEecccc-cchhHhHHHHHHHHHHHHHHhc
Q 009775 465 HKTHAVDSDGKITSNADVDFYID--DNMIHVVESKP-VKRYGDFFLRQIAKLEGLINDL 520 (526)
Q Consensus 465 ~k~r~l~~~G~~~~~sdlDF~Id--~dmIhI~e~k~-~r~~~d~Fir~i~k~~~~~~~l 520 (526)
+..+.++-.|| ..+|.+.+... .+.|.++ +..+.++.++++.|
T Consensus 381 ------------I~~~~i~a~id~~~g~v~~~~~~~~~~~~~~~-l~~~~~l~~~vd~L 426 (434)
T 4b4t_Q 381 ------------ILDKIFYGVLDQGNGWLYVYETPNQDATYDSA-LELVGQLNKVVDQL 426 (434)
T ss_dssp ------------HHHTSSCCEEETTTTEEECC---------------------------
T ss_pred ------------HhCCCcceecccccCeEeeCCCcchhHHHHHH-HHHHHHHHHHHHHH
Confidence 11233455566 35666655543 4556554 56666666666554
No 6
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=95.92 E-value=0.089 Score=51.62 Aligned_cols=236 Identities=14% Similarity=0.183 Sum_probs=125.2
Q ss_pred cHHHHHHHHHHHHHhhhcCHHHHHHHHHhhHHHhHHHhcCCCCCCCHHHhhhhcCCChhHHHHHHHHhhhhhhcc--cCC
Q 009775 36 PDSVKSFVVHLYRHIREKNVYEIHQMYETSFQSLSDRLFKDTPWPSVDAVAHYVDNDHVFCLLYREMWFRHLYAR--LSP 113 (526)
Q Consensus 36 P~~Vk~Fl~~l~~~i~e~nv~eI~~lYE~~F~~lte~yfk~s~WP~~e~Va~~v~~D~vFl~LYkELyyRH~yar--~~p 113 (526)
|+.|..-|...+.+|+.+++.+-..+++.- .+.. .. ...|+-.++-|.-|.+||-... +.+
T Consensus 9 ~~~v~~~l~~w~~~i~~~~~~~A~~l~~~i----~~~~-~~------------~~~~~~~~~y~~ll~~r~~~~~~~~~~ 71 (383)
T 3ulq_A 9 SSSIGEKINEWYMYIRRFSIPDAEYLRREI----KQEL-DQ------------MEEDQDLHLYYSLMEFRHNLMLEYLEP 71 (383)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHH----HHHH-HT------------SCCCHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHHHHHcCHHHHHHHHHHH----HHHH-Hh------------hccchHHHHHHHHHHHHHHHHHhhcCc
Confidence 578999999999999999999999998873 2211 11 1147777788888999985421 111
Q ss_pred ChHhHHhHHHhHHHHHHHHhcCCcccCCchhHHHHhhhHHHhhhcchhhhhhcccCCCHHHHHHHhh-------cCCCcc
Q 009775 114 TLKQRIDSWDNYCSLFQVVLHGVVNMQLPNQWLWDMVDEFVYQFQSFCQYRAKMKNKTEQEIALLRQ-------YDQAWN 186 (526)
Q Consensus 114 t~~dR~~Sw~nYc~LF~~lL~g~v~l~LPn~WlWDiiDEFVYQfQsfc~yR~k~~~k~~eei~~l~~-------~~~vW~ 186 (526)
.-..+.+.=.++.++|..|-..+. . .=+.+.-++|-|...+.++. +..++-+..+++ .++-..
T Consensus 72 ~~~~~~e~~~~~~~~~~~i~~~~~------~-~~~~l~~~~~~~~g~~~~~~---g~~~~A~~~~~~al~~~~~~~~~~~ 141 (383)
T 3ulq_A 72 LEKMRIEEQPRLSDLLLEIDKKQA------R-LTGLLEYYFNFFRGMYELDQ---REYLSAIKFFKKAESKLIFVKDRIE 141 (383)
T ss_dssp GGGSCGGGSCCHHHHHHHHHHHTH------H-HHHHHHHHHHHHHHHHHHHT---TCHHHHHHHHHHHHTTGGGCCCHHH
T ss_pred ccccccccccchhhHHHHHHhcCC------C-chhHHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHhhCCCHHH
Confidence 100000011134456666543121 1 11233334444454443322 222333333222 222221
Q ss_pred hHHHHHHHHH-HHhhhhHHHHHHHHhccCCcccccCCccCCCCchhhHhhhHHHHHHHHHHHhhcccHHHHhhhccC-cc
Q 009775 187 VYGVLNFLQA-LVEKSMIIQILEREKEGLEQFTATDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLQP-ID 264 (526)
Q Consensus 187 ~~~VLn~L~s-Lv~kS~I~e~L~~~~~g~~~~~~a~~~~~~g~~~l~~mLGYFSlIGLlRvh~LLGDY~~ALk~L~~-Id 264 (526)
...++..|-. .....+..+-++.......-....+++ .+ .--.++..|-.++..+|+|..|++.++. ++
T Consensus 142 ~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~-----~~----~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 212 (383)
T 3ulq_A 142 KAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAY-----NI----RLLQCHSLFATNFLDLKQYEDAISHFQKAYS 212 (383)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTT-----HH----HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccc-----hH----HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 1122222211 112233333333332222211111111 11 1124556667888999999999998765 44
Q ss_pred cCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q 009775 265 ITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLYIY 310 (526)
Q Consensus 265 l~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~yi~ 310 (526)
+.++. ..+.-...+++.+|.+|..+++|.+|++.|...+-...
T Consensus 213 ~~~~~---~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 255 (383)
T 3ulq_A 213 MAEAE---KQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFE 255 (383)
T ss_dssp HHHHT---TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHc---CChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 43321 12333456788999999999999999999999987543
No 7
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=95.84 E-value=0.16 Score=49.94 Aligned_cols=238 Identities=11% Similarity=0.080 Sum_probs=122.9
Q ss_pred CCc-HHHHHHHHHHHHHhhhcCHHHHHHHHHhhHHHhHHHhcCCCCCCCHHHhhhhcCCChhHHHHHHHHhhhhhhcccC
Q 009775 34 FVP-DSVKSFVVHLYRHIREKNVYEIHQMYETSFQSLSDRLFKDTPWPSVDAVAHYVDNDHVFCLLYREMWFRHLYARLS 112 (526)
Q Consensus 34 ~vP-~~Vk~Fl~~l~~~i~e~nv~eI~~lYE~~F~~lte~yfk~s~WP~~e~Va~~v~~D~vFl~LYkELyyRH~yar~~ 112 (526)
.|| ++|.+-|...+++|+.+|+.+-..+++.- ... +. -...|+-.++-|.-+.|||-...-.
T Consensus 6 ~~~~~~v~~~l~~wy~~i~~~~~~~A~~l~~~i----~~~-~~------------~~~~~~~~~~yy~l~~~r~~~~~~~ 68 (378)
T 3q15_A 6 AIPSSRVGVKINEWYKMIRQFSVPDAEILKAEV----EQD-IQ------------QMEEDQDLLIYYSLMCFRHQLMLDY 68 (378)
T ss_dssp CBCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH----HHH-GG------------GBCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred cccHHHHHHHHHHHHHHHHHcCHHHHHHHHHHH----HHH-HH------------HhcccHHHHHHHHHHHHHHHHHHhh
Confidence 355 78999999999999999999999999873 211 11 1124777778889999998664211
Q ss_pred CChHhHHhHHHhHHHHHHHHhcCCcccCCchhHHHHhhhHHHhhhcchhhhhhcccCCCHHHHHHHh-------hcCCCc
Q 009775 113 PTLKQRIDSWDNYCSLFQVVLHGVVNMQLPNQWLWDMVDEFVYQFQSFCQYRAKMKNKTEQEIALLR-------QYDQAW 185 (526)
Q Consensus 113 pt~~dR~~Sw~nYc~LF~~lL~g~v~l~LPn~WlWDiiDEFVYQfQsfc~yR~k~~~k~~eei~~l~-------~~~~vW 185 (526)
-........-.++.++++.|-.-+. |.. +.+.=+.|-+.....++ .+..++-+..++ ..++-.
T Consensus 69 ~~~~~~~~~~~~~~~~l~~i~~~~~----~~~---~~l~~~~~~~~g~~~~~---~g~~~~A~~~~~~al~~~~~~~~~~ 138 (378)
T 3q15_A 69 LEPGKTYGNRPTVTELLETIETPQK----KLT---GLLKYYSLFFRGMYEFD---QKEYVEAIGYYREAEKELPFVSDDI 138 (378)
T ss_dssp CCC--------CHHHHHHHHHGGGH----HHH---HHHHHHHHHHHHHHHHH---TTCHHHHHHHHHHHHTTGGGCCCHH
T ss_pred cCcccccccccchHHHHHHHhccCC----CCc---cHHHHHHHHHHHHHHHH---HCCHHHHHHHHHHHHHHHhhCCChH
Confidence 1111111123466777777654111 111 12222222222222211 122233333322 122211
Q ss_pred chHHHHHHHHH-HHhhhhHHHHHHHHhccCCcccccCCccCCCCchhhHhhhHHHHHHHHHHHhhcccHHHHhhhccC-c
Q 009775 186 NVYGVLNFLQA-LVEKSMIIQILEREKEGLEQFTATDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLQP-I 263 (526)
Q Consensus 186 ~~~~VLn~L~s-Lv~kS~I~e~L~~~~~g~~~~~~a~~~~~~g~~~l~~mLGYFSlIGLlRvh~LLGDY~~ALk~L~~-I 263 (526)
....+++.|-. .....+..+.++......+.....+++ .+ .. --+...|-.++..+|+|..|++.++. +
T Consensus 139 ~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~-----~~--~~--~~~~~~lg~~y~~~~~~~~A~~~~~~al 209 (378)
T 3q15_A 139 EKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLY-----SI--RT--IQSLFVIAGNYDDFKHYDKALPHLEAAL 209 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTC-----HH--HH--HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCc-----hh--hH--HHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 11122222211 122223333333222222111111111 11 01 12444566678889999999987754 4
Q ss_pred ccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q 009775 264 DITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLYIY 310 (526)
Q Consensus 264 dl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~yi~ 310 (526)
++.++. ..+.-...+++.+|.+|..+++|.+|++.|...+....
T Consensus 210 ~~~~~~---~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~ 253 (378)
T 3q15_A 210 ELAMDI---QNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSR 253 (378)
T ss_dssp HHHHHT---TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHc---CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 442211 11223456788999999999999999999999987543
No 8
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=95.25 E-value=0.02 Score=47.01 Aligned_cols=60 Identities=22% Similarity=0.304 Sum_probs=49.7
Q ss_pred HHHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
+..+|-.++..+|+|..|++.++. +++++ -+..+++..|.+|+.+++|.+|+..|...+.
T Consensus 29 ~~~~lg~~~~~~~~~~~A~~~~~~al~~~p---------~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 89 (117)
T 3k9i_A 29 CYLGLGSTFRTLGEYRKAEAVLANGVKQFP---------NHQALRVFYAMVLYNLGRYEQGVELLLKIIA 89 (117)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCT---------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCC---------CchHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 456777889999999999999876 33333 2367889999999999999999999999874
No 9
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=95.20 E-value=0.021 Score=46.25 Aligned_cols=61 Identities=20% Similarity=0.221 Sum_probs=50.0
Q ss_pred HHHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLY 308 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~y 308 (526)
+..+|-+++..+|+|..|++.++. |++++. ....++..|-+|..+++|.+|+..|...+--
T Consensus 9 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~---------~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l 70 (100)
T 3ma5_A 9 TRYALAQEHLKHDNASRALALFEELVETDPD---------YVGTYYHLGKLYERLDRTDDAIDTYAQGIEV 70 (100)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT---------CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 345667788899999999999886 445442 3458899999999999999999999998854
No 10
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=95.08 E-value=0.021 Score=48.52 Aligned_cols=58 Identities=14% Similarity=0.182 Sum_probs=45.3
Q ss_pred HHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 241 VGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 241 IGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
..+-.++..+|+|..|++.++. |++++. ++..++..|.+|+.+++|.+|++.|..+|-
T Consensus 51 ~~~~~~~~~~~~~~~A~~~~~~al~~~p~---------~~~a~~~lg~~~~~~~~~~~A~~~~~~al~ 109 (126)
T 4gco_A 51 SNRAACLTKLMEFQRALDDCDTCIRLDSK---------FIKGYIRKAACLVAMREWSKAQRAYEDALQ 109 (126)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHhhHHHhhccHHHHHHHHHHHHHhhhh---------hhHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 3445677789999999988775 445443 456788999999999999999999988774
No 11
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=94.76 E-value=0.03 Score=49.90 Aligned_cols=58 Identities=16% Similarity=0.302 Sum_probs=44.8
Q ss_pred HHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 241 VGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 241 IGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
.+|-.++..+|+|..|++..+. |.+++ -+...+|..|.||+.++||.+|+++|...+-
T Consensus 74 ~~lg~~~~~~g~~~~Ai~~~~~al~l~P---------~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~ 132 (151)
T 3gyz_A 74 MGLAAIYQIKEQFQQAADLYAVAFALGK---------NDYTPVFHTGQCQLRLKAPLKAKECFELVIQ 132 (151)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSS---------SCCHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHhhCC---------CCcHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3455677788999999988765 34443 2456788999999999999999999988775
No 12
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=94.69 E-value=0.036 Score=43.63 Aligned_cols=59 Identities=19% Similarity=0.164 Sum_probs=47.4
Q ss_pred HHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
+..+-.++...|||..|++.++. +++++. +..+++..|.+|+.+++|.+|+..|...+-
T Consensus 7 ~~~~g~~~~~~~~~~~A~~~~~~al~~~p~---------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 66 (111)
T 2l6j_A 7 QKEQGNSLFKQGLYREAVHCYDQLITAQPQ---------NPVGYSNKAMALIKLGEYTQAIQMCQQGLR 66 (111)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCC---------CHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 44566788889999999998876 344432 356789999999999999999999999773
No 13
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=94.54 E-value=0.084 Score=44.76 Aligned_cols=58 Identities=19% Similarity=0.124 Sum_probs=43.5
Q ss_pred HHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 241 VGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 241 IGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
.+|-.++..+|+|..|++.++. |++++ -+...+++.|.+|+.+++|.+|++.|...+-
T Consensus 56 ~~lg~~~~~~g~~~~A~~~~~~al~~~p---------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 114 (142)
T 2xcb_A 56 LGLGACRQSLGLYEQALQSYSYGALMDI---------NEPRFPFHAAECHLQLGDLDGAESGFYSARA 114 (142)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCT---------TCTHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhcCC---------CCcHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3455667788999999888775 33333 2445678889999999999999999888774
No 14
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=94.37 E-value=0.079 Score=46.03 Aligned_cols=58 Identities=12% Similarity=0.066 Sum_probs=45.6
Q ss_pred HHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 241 VGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 241 IGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
.+|-.++..+|+|..|++.++. +.+++ -+...+|+.|.+|+.++++.+|+..|...+-
T Consensus 59 ~~lg~~~~~~g~~~~A~~~~~~al~l~p---------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 117 (148)
T 2vgx_A 59 LGLGACRQAMGQYDLAIHSYSYGAVMDI---------XEPRFPFHAAECLLQXGELAEAESGLFLAQE 117 (148)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHST---------TCTHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhcCC---------CCchHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4566778889999999988876 33443 3456788999999999999999999988774
No 15
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=94.22 E-value=0.11 Score=44.71 Aligned_cols=59 Identities=7% Similarity=-0.014 Sum_probs=48.1
Q ss_pred HHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
+..+-+++...|||..|++.++. |++++. +...++..|.+|+.+++|.+|+..|...+.
T Consensus 14 ~~~~g~~~~~~g~~~~A~~~~~~al~~~p~---------~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 73 (164)
T 3sz7_A 14 LKSEGNAAMARKEYSKAIDLYTQALSIAPA---------NPIYLSNRAAAYSASGQHEKAAEDAELATV 73 (164)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTT---------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCc---------CHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 34556678889999999998876 444432 467889999999999999999999999875
No 16
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=94.17 E-value=0.044 Score=47.27 Aligned_cols=59 Identities=10% Similarity=0.180 Sum_probs=47.6
Q ss_pred HHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
...+..++..+|+|..|++..+. |++++ -++..+|..|.+|+.+++|.+|+..|..+|-
T Consensus 66 ~~nla~~~~~~~~~~~A~~~~~~al~~~p---------~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~ 125 (162)
T 3rkv_A 66 YANMSQCYLNIGDLHEAEETSSEVLKREE---------TNEKALFRRAKARIAAWKLDEAEEDLKLLLR 125 (162)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHST---------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHhcCC---------cchHHHHHHHHHHHHHhcHHHHHHHHHHHHh
Confidence 34556678889999999998765 34433 3567899999999999999999999988764
No 17
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=93.90 E-value=0.046 Score=47.46 Aligned_cols=57 Identities=9% Similarity=0.106 Sum_probs=48.8
Q ss_pred HHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 242 GLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 242 GLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
.|-+++..+|||..|++.++. |++++ -+...++..|.+|..+++|.+|+..|..++-
T Consensus 36 ~la~~y~~~~~~~~A~~~~~~al~~~p---------~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~ 93 (150)
T 4ga2_A 36 YFAKLYYEAKEYDLAKKYICTYINVQE---------RDPKAHRFLGLLYELEENTDKAVECYRRSVE 93 (150)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCT---------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCC---------CCHHHHHHHHHHHHHcCchHHHHHHHHHHHH
Confidence 567899999999999999876 45544 3567899999999999999999999999875
No 18
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=93.88 E-value=0.19 Score=41.06 Aligned_cols=59 Identities=10% Similarity=0.059 Sum_probs=47.5
Q ss_pred HHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
+..+-+++...|||..|++.++. +++++. +...++..|.+|+.+++|.+|+..|..++.
T Consensus 12 ~~~~g~~~~~~~~~~~A~~~~~~al~~~~~---------~~~~~~~l~~~~~~~~~~~~A~~~~~~al~ 71 (137)
T 3q49_B 12 LKEQGNRLFVGRKYPEAAACYGRAITRNPL---------VAVYYTNRALCYLKMQQPEQALADCRRALE 71 (137)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHhhCcC---------cHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 34555677889999999998876 444432 356789999999999999999999999875
No 19
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=93.86 E-value=0.063 Score=43.97 Aligned_cols=60 Identities=8% Similarity=0.116 Sum_probs=47.7
Q ss_pred HHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLY 308 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~y 308 (526)
...+..++..+|+|..|++.++. |++++ -+...++..|.+|+.+++|.+|+..|..++-.
T Consensus 41 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p---------~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~ 101 (126)
T 3upv_A 41 YSNRAAALAKLMSFPEAIADCNKAIEKDP---------NFVRAYIRKATAQIAVKEYASALETLDAARTK 101 (126)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCT---------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCC---------CcHHHHHHHHHHHHHHhCHHHHHHHHHHHHHh
Confidence 44556677889999999998876 34443 24667899999999999999999999998853
No 20
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=93.69 E-value=0.17 Score=43.53 Aligned_cols=102 Identities=11% Similarity=0.049 Sum_probs=59.3
Q ss_pred HHHHhhcccHHHHhhhccC-cccC--------C-cccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH-hh
Q 009775 244 LRVHCLLGDYHTGLKCLQP-IDIT--------Q-QGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLYIY-KT 312 (526)
Q Consensus 244 lRvh~LLGDY~~ALk~L~~-Idl~--------~-k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~yi~-r~ 312 (526)
-..+.-.|||..|++..+. |++. . ......+.+-.+.+++..|.||+.+++|.+|+..|..+|-.-- ..
T Consensus 18 G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~ 97 (162)
T 3rkv_A 18 GNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVLKREETNE 97 (162)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCcch
Confidence 3455678999998887654 2320 0 0011122455678999999999999999999999999886310 01
Q ss_pred cccccCChhHHHHhhHHHHHHHHHHHHHhhCCCC
Q 009775 313 KQYHQKSPQYEQILKKNEQMYALLAICLSLCPQV 346 (526)
Q Consensus 313 k~~~~ks~q~d~i~K~~eqMyaLlAIc~~l~P~~ 346 (526)
+.+..+..-+- -.+..+.....+--++.+.|..
T Consensus 98 ~a~~~~g~~~~-~~g~~~~A~~~~~~al~l~p~~ 130 (162)
T 3rkv_A 98 KALFRRAKARI-AAWKLDEAEEDLKLLLRNHPAA 130 (162)
T ss_dssp HHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCGGG
T ss_pred HHHHHHHHHHH-HHhcHHHHHHHHHHHHhcCCCC
Confidence 11111110111 1223344445555577888853
No 21
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=93.63 E-value=0.066 Score=46.22 Aligned_cols=59 Identities=10% Similarity=0.065 Sum_probs=48.4
Q ss_pred HHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
+..+..++..+|+|..|++.++. |++++ -+...++..|.+|+.+++|.+|+..|..++-
T Consensus 48 ~~~l~~~~~~~g~~~~A~~~~~~al~~~p---------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 107 (164)
T 3sz7_A 48 LSNRAAAYSASGQHEKAAEDAELATVVDP---------KYSKAWSRLGLARFDMADYKGAKEAYEKGIE 107 (164)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCT---------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHhCC---------CCHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 45566778889999999998876 44443 2467899999999999999999999998774
No 22
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=93.52 E-value=0.08 Score=44.85 Aligned_cols=54 Identities=11% Similarity=0.139 Sum_probs=44.6
Q ss_pred HHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 245 RVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 245 Rvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
..+.-.|||..|++..+. |++++. +..+++..|.||+.+++|.+|+..|..++-
T Consensus 21 ~~~~~~g~~~~A~~~~~~al~~~p~---------~~~~~~~~~~~~~~~~~~~~A~~~~~~al~ 75 (126)
T 4gco_A 21 NEYFKKGDYPTAMRHYNEAVKRDPE---------NAILYSNRAACLTKLMEFQRALDDCDTCIR 75 (126)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCC---------CHHHHHHHhhHHHhhccHHHHHHHHHHHHH
Confidence 345678999999998875 555443 467889999999999999999999999875
No 23
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=93.51 E-value=0.077 Score=43.47 Aligned_cols=60 Identities=12% Similarity=0.181 Sum_probs=48.6
Q ss_pred HHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLY 308 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~y 308 (526)
...+..++..+|+|..|++.++. +.+++. +...++..|.+|+.+++|.+|+..|...+-.
T Consensus 46 ~~~l~~~~~~~~~~~~A~~~~~~al~~~p~---------~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 106 (137)
T 3q49_B 46 YTNRALCYLKMQQPEQALADCRRALELDGQ---------SVKAHFFLGQCQLEMESYDEAIANLQRAYSL 106 (137)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCch---------hHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 45566778889999999998876 334432 5668999999999999999999999998853
No 24
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=93.51 E-value=0.28 Score=43.52 Aligned_cols=138 Identities=12% Similarity=0.053 Sum_probs=70.0
Q ss_pred HHHHHHHHHhhcccHHHHhhhccC-cccCCccc-cc------ccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQP-IDITQQGV-YT------SVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLYIY 310 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l-~~------~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~yi~ 310 (526)
++..+-+.+...|+|..|++.++. +++.+... +. ......+.+++..|-+|+.+++|.+|+..|..++..-.
T Consensus 40 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p 119 (198)
T 2fbn_A 40 DIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKIDK 119 (198)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCc
Confidence 445566778889999999998775 34433211 00 00111247889999999999999999999999886311
Q ss_pred hh-cccccCChhHHHHhhHHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHhhHHHHHhhccChhhhcchHhhhhh
Q 009775 311 KT-KQYHQKSPQYEQILKKNEQMYALLAICLSLCPQVKHVEETVNSQLREKYGEKMIRMQRYDDEAFSIYDELFSY 385 (526)
Q Consensus 311 r~-k~~~~ks~q~d~i~K~~eqMyaLlAIc~~l~P~~~~lDe~I~~~lrEky~dk~~kmq~Gd~e~f~~~~elF~~ 385 (526)
.. +.+.....-+ .-.+..+.....+--++.+.|.. ..+...+.. .-.++.+..+++...| ..+|..
T Consensus 120 ~~~~~~~~lg~~~-~~~~~~~~A~~~~~~al~~~p~~----~~~~~~l~~-~~~~~~~~~~~~~~~~---~~~f~~ 186 (198)
T 2fbn_A 120 NNVKALYKLGVAN-MYFGFLEEAKENLYKAASLNPNN----LDIRNSYEL-CVNKLKEARKKDKLTF---GGMFDK 186 (198)
T ss_dssp TCHHHHHHHHHHH-HHHTCHHHHHHHHHHHHHHSTTC----HHHHHHHHH-HHHHHHHHHC---------------
T ss_pred ccHHHHHHHHHHH-HHcccHHHHHHHHHHHHHHCCCc----HHHHHHHHH-HHHHHHHHHHHHHHHH---HHHhcc
Confidence 00 0011111001 11233455555556677788854 223222221 2233445555555555 666654
No 25
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=93.49 E-value=0.078 Score=42.49 Aligned_cols=60 Identities=17% Similarity=0.139 Sum_probs=47.4
Q ss_pred HHHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
++..+..++..+|+|..|++.++. ++++ +.+...++..|.+|+.+++|.+|++.|...+.
T Consensus 52 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~---------~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~ 112 (133)
T 2lni_A 52 LYSNRAACYTKLLEFQLALKDCEECIQLE---------PTFIKGYTRKAAALEAMKDYTKAMDVYQKALD 112 (133)
T ss_dssp HHHHHHHHHTTTTCHHHHHHHHHHHHHHC---------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhC---------CCchHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 345666778889999999998865 2232 23567889999999999999999999998774
No 26
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=93.42 E-value=0.4 Score=37.84 Aligned_cols=60 Identities=15% Similarity=0.079 Sum_probs=48.2
Q ss_pred HHHHHHHHhhcccHHHHhhhccCc-ccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQPI-DITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLY 308 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~I-dl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~y 308 (526)
+..+..++...|||..|++.++.. ++++ -+..+++..|-+|+.+++|.+|+..|..++..
T Consensus 7 ~~~l~~~~~~~~~~~~A~~~~~~a~~~~~---------~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 67 (131)
T 1elr_A 7 EKELGNDAYKKKDFDTALKHYDKAKELDP---------TNMTYITNQAAVYFEKGDYNKCRELCEKAIEV 67 (131)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCT---------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCC---------ccHHHHHHHHHHHHHhccHHHHHHHHHHHHhh
Confidence 455667888899999999988763 3332 23567889999999999999999999998864
No 27
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=93.39 E-value=0.095 Score=43.95 Aligned_cols=58 Identities=9% Similarity=-0.052 Sum_probs=45.3
Q ss_pred HHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKIL 306 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL 306 (526)
...|-+++..+|++..|++.++. +++++. +...++..|-+|+.++++.+|+..|...+
T Consensus 54 ~~~lg~~~~~~g~~~~A~~~~~~al~l~P~---------~~~~~~~la~~~~~~g~~~~A~~~~~~al 112 (121)
T 1hxi_A 54 WRSLGLTQAENEKDGLAIIALNHARMLDPK---------DIAVHAALAVSHTNEHNANAALASLRAWL 112 (121)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---------CHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 34556677889999999998876 344442 45577899999999999999999998866
No 28
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=93.27 E-value=0.1 Score=39.49 Aligned_cols=59 Identities=22% Similarity=0.316 Sum_probs=46.6
Q ss_pred HHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
...+.+++...|+|..|++.++. +++++. +...++..|.+|+.+++|.+|+..|..++.
T Consensus 12 ~~~la~~~~~~~~~~~A~~~~~~a~~~~~~---------~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~ 71 (91)
T 1na3_A 12 WYNLGNAYYKQGDYDEAIEYYQKALELDPN---------NAEAWYNLGNAYYKQGDYDEAIEYYQKALE 71 (91)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHhcCCC---------CHHHHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 34556678889999999998865 333332 346788999999999999999999998874
No 29
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=93.21 E-value=0.091 Score=42.55 Aligned_cols=62 Identities=5% Similarity=0.009 Sum_probs=46.4
Q ss_pred HHHHHHHHhhcccHHHHhhhccCc-ccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQPI-DITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~I-dl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
...+.+++..+|||..|++.++.+ ++++...+ ....+|..|.+|+.+++|.+|+..|..++.
T Consensus 42 ~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~------~~~~~~~la~~~~~~g~~~~A~~~~~~~~~ 104 (129)
T 2xev_A 42 LYWLGESYYATRNFQLAEAQFRDLVSRYPTHDK------AAGGLLKLGLSQYGEGKNTEAQQTLQQVAT 104 (129)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTT------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcc------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 345566778899999999988763 33332211 145688999999999999999999998774
No 30
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=93.11 E-value=0.6 Score=49.83 Aligned_cols=154 Identities=6% Similarity=0.025 Sum_probs=101.1
Q ss_pred chhhHhhhHHHHHHHHHHHhhcccHHHHhhhccCcccCCc-ccccccc-cceehHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 009775 229 SNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLQPIDITQQ-GVYTSVI-GSHITTIYHYGFANLMLRRYVDAIREFNKIL 306 (526)
Q Consensus 229 ~~l~~mLGYFSlIGLlRvh~LLGDY~~ALk~L~~Idl~~k-~l~~~V~-~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL 306 (526)
.|--|.-+||=...|+|++-.+|....|-.++.+|+-... .-++..| +=.|+..||+|--||.-.+|.+|-..|...+
T Consensus 168 ~p~kk~~~l~l~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~ 247 (455)
T 3t5v_B 168 IPGKQRILLYLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQIEYRYLLGRYYLLNSQVHNAFVQFNEAF 247 (455)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ccccchhHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccceEeeeHHHHHHHHHHccHHHHHHHHHHHH
Confidence 3667788888888999999999999999999999987421 1244445 4567888999999999999999999999987
Q ss_pred HHH-HhhcccccCChhHHHHhhHHHHHHHHHHHH---HhhCCCCcchhhHHHHHHHHHhhHHHHHhhccChhhhcchHhh
Q 009775 307 LYI-YKTKQYHQKSPQYEQILKKNEQMYALLAIC---LSLCPQVKHVEETVNSQLREKYGEKMIRMQRYDDEAFSIYDEL 382 (526)
Q Consensus 307 ~yi-~r~k~~~~ks~q~d~i~K~~eqMyaLlAIc---~~l~P~~~~lDe~I~~~lrEky~dk~~kmq~Gd~e~f~~~~el 382 (526)
..+ .+.. ..++ ..+.-.+..-+|..| ++-.|....+.......|.+.|.+=...++.||...| ++.
T Consensus 248 ~~lcp~~~----~~~~---~~~n~~~ILkyLIpv~LLlG~~P~~~ll~k~~~~~L~~~y~~L~~AVr~Gdl~~F---~~~ 317 (455)
T 3t5v_B 248 QSLLNLPL----TNQA---ITRNGTRILNYMIPTGLILGKMVKWGPLRPFLSQETIDNWSVLYKHVRYGNIQGV---SLW 317 (455)
T ss_dssp HHHHHCCC----CCHH---HHHHHHHHHHHHHHHHHHTTCCBCHHHHGGGSCHHHHHHHHHHHHHHHHTCHHHH---HHH
T ss_pred HhcCCccc----cchh---hhhHHHHHHHHHHHHHHHcCCCCCHHHHcccchHHHHHHHHHHHHHHHhCCHHHH---HHH
Confidence 642 1110 1110 112223333333333 3333433111111113466778888888999999999 877
Q ss_pred hhhcCCCccc
Q 009775 383 FSYACPKFIT 392 (526)
Q Consensus 383 F~~acPKFIs 392 (526)
...-..-|+.
T Consensus 318 L~~~~~~f~~ 327 (455)
T 3t5v_B 318 LRQNERHLCA 327 (455)
T ss_dssp HHHTHHHHHH
T ss_pred HHHhHHHHHH
Confidence 7654443444
No 31
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=92.73 E-value=0.52 Score=37.05 Aligned_cols=60 Identities=7% Similarity=0.125 Sum_probs=47.8
Q ss_pred HHHHHHHHHhhcccHHHHhhhccCc-ccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQPI-DITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~I-dl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
++..+.+++...|||..|++.++.. .+++. +...++..|.+|+.+++|.+|+..|..++.
T Consensus 14 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~---------~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~ 74 (131)
T 2vyi_A 14 RLKTEGNEQMKVENFEAAVHFYGKAIELNPA---------NAVYFCNRAAAYSKLGNYAGAVQDCERAIC 74 (131)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHcCCC---------CHHHHHHHHHHHHHhhchHHHHHHHHHHHh
Confidence 4456667888899999999988763 33322 356788999999999999999999999875
No 32
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=92.66 E-value=0.096 Score=44.19 Aligned_cols=53 Identities=9% Similarity=0.142 Sum_probs=44.2
Q ss_pred HHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 246 VHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 246 vh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
++-..|||..|++..+. |++++. +..+++..|-+|+.+++|.+|+..|...|-
T Consensus 17 ~~~~~~~~~~A~~~y~~Al~~~p~---------~~~~~~nlg~~~~~~~~~~~A~~~~~~al~ 70 (127)
T 4gcn_A 17 AAYKQKDFEKAHVHYDKAIELDPS---------NITFYNNKAAVYFEEKKFAECVQFCEKAVE 70 (127)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCC---------CHHHHHhHHHHHHHhhhHHHHHHHHHHHHH
Confidence 45678999999998865 556553 356788999999999999999999999885
No 33
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=92.63 E-value=0.13 Score=40.05 Aligned_cols=58 Identities=17% Similarity=0.116 Sum_probs=44.4
Q ss_pred HHHHHHHHhhcccHHHHhhhccCc-ccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQPI-DITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKIL 306 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~I-dl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL 306 (526)
...+.+++..+|||..|++.++.. ++++ .+...++..|.+|..+++|.+|++.|..++
T Consensus 41 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~---------~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~ 99 (118)
T 1elw_A 41 YSNRSAAYAKKGDYQKAYEDGCKTVDLKP---------DWGKGYSRKAAALEFLNRFEEAKRTYEEGL 99 (118)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCT---------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhccHHHHHHHHHHHHHhCc---------ccHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 345556777889999999887753 2322 345678899999999999999999988866
No 34
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=92.54 E-value=0.11 Score=44.98 Aligned_cols=59 Identities=20% Similarity=0.172 Sum_probs=47.4
Q ss_pred HHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
...+-+++..+|+|..|++.++. +++++ -+..+++..|.+|..+++|.+|++.|...|-
T Consensus 110 ~~~lg~~~~~~g~~~~A~~~~~~~l~~~p---------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 169 (184)
T 3vtx_A 110 YYKLGLVYDSMGEHDKAIEAYEKTISIKP---------GFIRAYQSIGLAYEGKGLRDEAVKYFKKALE 169 (184)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCT---------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCchhHHHHHHHHHHhcc---------hhhhHHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 34556788899999999998875 33433 3456789999999999999999999999873
No 35
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=92.49 E-value=0.14 Score=40.37 Aligned_cols=60 Identities=18% Similarity=0.174 Sum_probs=48.2
Q ss_pred HHHHHHHHHhhcccHHHHhhhccCc-ccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQPI-DITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~I-dl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
+...+.+++..+|+|..|++.++.. ++++ -+...++..|.+|+.+++|.+|++.|..++.
T Consensus 48 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~ 108 (131)
T 2vyi_A 48 YFCNRAAAYSKLGNYAGAVQDCERAICIDP---------AYSKAYGRMGLALSSLNKHVEAVAYYKKALE 108 (131)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCT---------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhchHHHHHHHHHHHhcCc---------cCHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 3456777888999999999988763 3332 2356789999999999999999999998774
No 36
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=92.49 E-value=0.16 Score=39.43 Aligned_cols=59 Identities=12% Similarity=0.060 Sum_probs=47.7
Q ss_pred HHHHHHHHhhcccHHHHhhhccCc-ccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQPI-DITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~I-dl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
+..+.+.+...|||..|++.++.. ++++ -+...++..|.+|+.+++|.+|+..|..++.
T Consensus 7 ~~~~~~~~~~~~~~~~A~~~~~~~~~~~~---------~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~ 66 (118)
T 1elw_A 7 LKEKGNKALSVGNIDDALQCYSEAIKLDP---------HNHVLYSNRSAAYAKKGDYQKAYEDGCKTVD 66 (118)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCT---------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHHCC---------CcHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Confidence 455667788899999999988763 2332 2466889999999999999999999998875
No 37
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=92.49 E-value=0.14 Score=41.43 Aligned_cols=60 Identities=12% Similarity=0.020 Sum_probs=48.4
Q ss_pred HHHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
+...|.+++..+|+|..|++.++. +++++ -+...++..|.+|+.+++|.+|+..|...+.
T Consensus 21 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p---------~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 81 (115)
T 2kat_A 21 LRFTLGKTYAEHEQFDAALPHLRAALDFDP---------TYSVAWKWLGKTLQGQGDRAGARQAWESGLA 81 (115)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCT---------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHHCC---------CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 345666788899999999998876 33333 3456789999999999999999999998875
No 38
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=92.41 E-value=0.12 Score=45.90 Aligned_cols=60 Identities=5% Similarity=-0.058 Sum_probs=48.1
Q ss_pred HHHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
++..+-.++...|+|..|++.++. |++++ -+...++..|.+|.+++||.+|+.+|...+.
T Consensus 38 ~~~~lg~~~~~~g~~~eA~~~~~~al~~~P---------~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~ 98 (151)
T 3gyz_A 38 DIYSYAYDFYNKGRIEEAEVFFRFLCIYDF---------YNVDYIMGLAAIYQIKEQFQQAADLYAVAFA 98 (151)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCT---------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCC---------CCHHHHHHHHHHHHHHccHHHHHHHHHHHHh
Confidence 345556677889999999999886 33343 3455788899999999999999999999875
No 39
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=92.36 E-value=0.87 Score=37.81 Aligned_cols=60 Identities=13% Similarity=0.115 Sum_probs=46.6
Q ss_pred HHHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
++..+.+++...|||..|++.++. +++++. ...+++..|.+|+.+++|.+|+..|...+.
T Consensus 15 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~---------~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~ 75 (166)
T 1a17_A 15 ELKTQANDYFKAKDYENAIKFYSQAIELNPS---------NAIYYGNRSLAYLRTECYGYALGDATRAIE 75 (166)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT---------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhCCC---------ChHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 344566677889999999998876 333332 256788899999999999999999998775
No 40
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=92.34 E-value=0.11 Score=40.05 Aligned_cols=58 Identities=17% Similarity=0.203 Sum_probs=46.1
Q ss_pred HHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 241 VGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 241 IGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
..+.+++...|+|..|++.++. +++++. ....++..|.+|+.+++|.+|+..|...+.
T Consensus 10 ~~~~~~~~~~~~~~~A~~~~~~a~~~~~~---------~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~ 68 (112)
T 2kck_A 10 YLEGVLQYDAGNYTESIDLFEKAIQLDPE---------ESKYWLMKGKALYNLERYEEAVDCYNYVIN 68 (112)
T ss_dssp GGHHHHHHSSCCHHHHHHHHHHHHHHCCC---------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhCcC---------CHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 4556778889999999998876 333332 245678999999999999999999998774
No 41
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=92.31 E-value=0.33 Score=40.97 Aligned_cols=59 Identities=15% Similarity=0.170 Sum_probs=47.8
Q ss_pred HHHHHHHHhhcccHHHHhhhccCc-ccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQPI-DITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~I-dl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
+..+.+.+...|+|..|++.++.+ .+++ -+...++..|-+|+.+++|.+|+..|...+.
T Consensus 21 ~~~~a~~~~~~g~~~~A~~~~~~al~~~p---------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 80 (142)
T 2xcb_A 21 LYALGFNQYQAGKWDDAQKIFQALCMLDH---------YDARYFLGLGACRQSLGLYEQALQSYSYGAL 80 (142)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCT---------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHHhCC---------ccHHHHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 456667888899999999998763 2333 2456788999999999999999999999875
No 42
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=92.24 E-value=0.48 Score=43.70 Aligned_cols=78 Identities=15% Similarity=0.157 Sum_probs=52.9
Q ss_pred chhhHhhhHHHHHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceeh-----HHHHHHHHHHHHhhHHHHHHHH
Q 009775 229 SNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHIT-----TIYHYGFANLMLRRYVDAIREF 302 (526)
Q Consensus 229 ~~l~~mLGYFSlIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs-----~~YyvGFaYlMlrRY~DAir~F 302 (526)
.|+...-.-..++.+--.+.-+|||..|++.-+. |++++...-. -+.+.. .++..|.|+.-|+||.+|+.+|
T Consensus 3 ~~~~~~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~--~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~ 80 (159)
T 2hr2_A 3 KPLKEVVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPE--EAFDHAGFDAFCHAGLAEALAGLRSFDEALHSA 80 (159)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTT--SCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcch--hhhhhccchHHHHHHHHHHHHHCCCHHHHHHHH
Confidence 3444333444455555667789999999987654 4554431000 122333 8999999999999999999999
Q ss_pred HHHHHH
Q 009775 303 NKILLY 308 (526)
Q Consensus 303 ~~iL~y 308 (526)
...|-.
T Consensus 81 ~kAL~l 86 (159)
T 2hr2_A 81 DKALHY 86 (159)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 999975
No 43
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=92.21 E-value=0.16 Score=41.45 Aligned_cols=57 Identities=16% Similarity=0.079 Sum_probs=46.0
Q ss_pred HHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 242 GLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 242 GLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
.+-..+...|||..|++.++. |++++. ...+++..|.+|+.+++|.+|+..|...+.
T Consensus 9 ~~g~~~~~~~~~~~A~~~~~~al~~~p~---------~~~~~~~~a~~~~~~~~~~~A~~~~~~al~ 66 (126)
T 3upv_A 9 LEGKEYFTKSDWPNAVKAYTEMIKRAPE---------DARGYSNRAAALAKLMSFPEAIADCNKAIE 66 (126)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHhCCC---------ChHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 344567789999999998875 444443 347889999999999999999999999875
No 44
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=92.09 E-value=0.29 Score=39.10 Aligned_cols=61 Identities=11% Similarity=0.096 Sum_probs=49.6
Q ss_pred HHHHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 238 FSMVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 238 FSlIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
-++..+..++...|||..|++.++. +++++. +..+++..|.+|+.+++|.+|++.|...+.
T Consensus 17 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~---------~~~~~~~la~~~~~~~~~~~A~~~~~~a~~ 78 (133)
T 2lni_A 17 LMVKNKGNECFQKGDYPQAMKHYTEAIKRNPK---------DAKLYSNRAACYTKLLEFQLALKDCEECIQ 78 (133)
T ss_dssp HHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTT---------CHHHHHHHHHHHTTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC---------cHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 4566677788899999999998876 334332 356789999999999999999999998875
No 45
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=92.00 E-value=0.1 Score=43.97 Aligned_cols=65 Identities=9% Similarity=-0.005 Sum_probs=47.1
Q ss_pred HHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 241 VGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 241 IGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
..+-.++..+|+|..|++..+. |++++... ........+++..|-+|..+++|.+|+..|...|.
T Consensus 46 ~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~--~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~ 111 (127)
T 4gcn_A 46 NNKAAVYFEEKKFAECVQFCEKAVEVGRETR--ADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLS 111 (127)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HhHHHHHHHhhhHHHHHHHHHHHHHhCcccc--hhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 3455678889999999998765 55544210 00111234688899999999999999999998774
No 46
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=91.82 E-value=0.095 Score=40.52 Aligned_cols=60 Identities=12% Similarity=0.034 Sum_probs=47.5
Q ss_pred HHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHH-hhHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLML-RRYVDAIREFNKIL 306 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMl-rRY~DAir~F~~iL 306 (526)
...+..++..+|+|..|++.++. +++++. .-+...++..|-+|+.+ +++.+|++.|..++
T Consensus 43 ~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~-------~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~ 104 (112)
T 2kck_A 43 WLMKGKALYNLERYEEAVDCYNYVINVIED-------EYNKDVWAAKADALRYIEGKEVEAEIAEARAK 104 (112)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTSCC-------TTCHHHHHHHHHHHTTCSSCSHHHHHHHHHHG
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHhCcc-------cchHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 35667788899999999998876 333332 12457889999999999 99999999999876
No 47
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=91.76 E-value=0.14 Score=41.49 Aligned_cols=61 Identities=16% Similarity=0.227 Sum_probs=46.4
Q ss_pred HHHHHHHhhcccHHHHhhhccCcc-cCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 241 VGLLRVHCLLGDYHTGLKCLQPID-ITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 241 IGLlRvh~LLGDY~~ALk~L~~Id-l~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
..+.+.+...|||..|++.++.+- .++...+ ....+|..|-+|+.+++|.+|+..|..++-
T Consensus 6 ~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~------~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~ 67 (129)
T 2xev_A 6 YNVAFDALKNGKYDDASQLFLSFLELYPNGVY------TPNALYWLGESYYATRNFQLAEAQFRDLVS 67 (129)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTT------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcc------cHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 345667788999999999988632 2332111 115788999999999999999999999875
No 48
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=91.71 E-value=0.18 Score=44.84 Aligned_cols=61 Identities=16% Similarity=0.239 Sum_probs=49.7
Q ss_pred HHHHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 238 FSMVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 238 FSlIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
-+...+.+++..+|+|..|++.++. +++++ -+...+|..|-+|+.+++|.+|+..|..++.
T Consensus 89 ~~~~~la~~~~~~~~~~~A~~~~~~al~~~p---------~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~ 150 (198)
T 2fbn_A 89 SCNLNLATCYNKNKDYPKAIDHASKVLKIDK---------NNVKALYKLGVANMYFGFLEEAKENLYKAAS 150 (198)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHST---------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCc---------ccHHHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 4556677888899999999998876 33333 3456789999999999999999999999874
No 49
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=91.38 E-value=0.36 Score=43.38 Aligned_cols=60 Identities=13% Similarity=0.203 Sum_probs=47.4
Q ss_pred HHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
+..+-+++.-.|||..|++.++. |++++. -....+|..|.+|+.+++|.+|++.|...+-
T Consensus 10 ~~~~g~~~~~~~~~~~A~~~~~~al~~~~~--------~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~ 70 (228)
T 4i17_A 10 LKNEGNDALNAKNYAVAFEKYSEYLKLTNN--------QDSVTAYNCGVCADNIKKYKEAADYFDIAIK 70 (228)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHTTT--------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHhccCC--------CCcHHHHHHHHHHHHhhcHHHHHHHHHHHHH
Confidence 44556678889999999999885 455541 1226788899999999999999999998874
No 50
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=91.35 E-value=0.13 Score=47.44 Aligned_cols=65 Identities=22% Similarity=0.250 Sum_probs=52.2
Q ss_pred HHHHHHHHHhhcccHHHHhhhccC-ccc-------CCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQP-IDI-------TQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLY 308 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~-Idl-------~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~y 308 (526)
+...+-.++.-||+|..|+...+. |++ ++ .-+.++|..+|.-|.|+.-|+||.+|+.+|...|-.
T Consensus 59 a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e~~p-----d~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel 131 (159)
T 2hr2_A 59 CHAGLAEALAGLRSFDEALHSADKALHYFNRRGELNQ-----DEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEM 131 (159)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCTTS-----THHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccccCCC-----chHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 556677788889999999988765 455 44 234566667799999999999999999999998865
No 51
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=91.21 E-value=0.2 Score=39.04 Aligned_cols=58 Identities=16% Similarity=0.222 Sum_probs=46.6
Q ss_pred HHHHHHHhhcccHHHHhhhccCc-ccCCcccccccccceeh-HHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 241 VGLLRVHCLLGDYHTGLKCLQPI-DITQQGVYTSVIGSHIT-TIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 241 IGLlRvh~LLGDY~~ALk~L~~I-dl~~k~l~~~V~~c~Vs-~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
+.+.+.+...|+|..|++.++.. ++++. +.. .++..|-+|+.+++|.+|+..|..++.
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~---------~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~ 63 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPV---------GKDEAYYLMGNAYRKLGDWQKALNNYQSAIE 63 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSS---------THHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCC---------cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 45667788899999999988763 33332 234 789999999999999999999999874
No 52
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=91.18 E-value=0.14 Score=40.50 Aligned_cols=66 Identities=18% Similarity=0.201 Sum_probs=47.8
Q ss_pred HHHHHHHHhhcccHHHHhhhccCc-ccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQPI-DITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~I-dl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
...+..++...|+|..|++.++.. ++.+.. .........+++..|.+|+.+++|.+|+..|..++.
T Consensus 41 ~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~--~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~ 107 (131)
T 1elr_A 41 ITNQAAVYFEKGDYNKCRELCEKAIEVGREN--REDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLA 107 (131)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHS--TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHhhcccc--chhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 455667788899999999988762 332211 000111156789999999999999999999998875
No 53
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=91.05 E-value=0.26 Score=45.71 Aligned_cols=69 Identities=14% Similarity=0.168 Sum_probs=52.5
Q ss_pred HHHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
++..+.+++..+|+|..|++.++. +++.++.--...++-...+++..|-+|..+++|.+|+..|...+.
T Consensus 195 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~ 264 (330)
T 3hym_B 195 VMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALV 264 (330)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 456677888999999999998876 333322111122355678999999999999999999999999875
No 54
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=90.92 E-value=0.22 Score=43.89 Aligned_cols=60 Identities=13% Similarity=0.216 Sum_probs=48.4
Q ss_pred HHHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
+...+..++..+|||..|++.++. +++++ -+...++..|-+|+.+++|.+|+..|...+-
T Consensus 39 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~~---------~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~ 99 (213)
T 1hh8_A 39 ICFNIGCMYTILKNMTEAEKAFTRSINRDK---------HLAVAYFQRGMLYYQTEKYDLAIKDLKEALI 99 (213)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCT---------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCc---------cchHHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 455667788899999999998875 33333 2456789999999999999999999999875
No 55
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=90.89 E-value=0.24 Score=43.67 Aligned_cols=69 Identities=9% Similarity=-0.024 Sum_probs=50.9
Q ss_pred HHHHHHHHHhhcccHHHHhhhccC-cccCCccc-------ccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQP-IDITQQGV-------YTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l-------~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
+...+.+++..+|+|..|++.++. +++.+... -....+-+...++..|.+|..+++|.+|+..|...+.
T Consensus 73 ~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 149 (213)
T 1hh8_A 73 AYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATS 149 (213)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 345677888999999999998876 34433221 0012334567899999999999999999999988763
No 56
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=90.82 E-value=2 Score=40.68 Aligned_cols=72 Identities=14% Similarity=0.016 Sum_probs=48.9
Q ss_pred hhHHHHHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHh
Q 009775 235 LGYFSMVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLYIYK 311 (526)
Q Consensus 235 LGYFSlIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~yi~r 311 (526)
+-|+..+|. ++.-.|+|..|++.++. +++..+. .-..-.+.++..+|.+|..+++|..|+..|..+|-...+
T Consensus 115 ~~~~~~l~~--~~~~~~~~~~Ai~~~~~al~~~~~~---~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~ 187 (293)
T 3u3w_A 115 LQWQYYVAA--YVLKKVDYEYCILELKKLLNQQLTG---IDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEA 187 (293)
T ss_dssp HHHHHHHHH--HHTTSSCHHHHHHHHHHHHHTCCCC---SCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH--HHHcccCHHHHHHHHHHHHHHhccc---ccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh
Confidence 444444444 46778999999987765 2332211 011123557899999999999999999999999975433
No 57
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=90.75 E-value=2.1 Score=40.58 Aligned_cols=148 Identities=16% Similarity=0.125 Sum_probs=87.0
Q ss_pred eehHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhcccccCChhHHHHhhHHHHHHHHHHHHHhhCCCCcchhh-HHHHH
Q 009775 278 HITTIYHYGFANLMLRRYVDAIREFNKILLYIYKTKQYHQKSPQYEQILKKNEQMYALLAICLSLCPQVKHVEE-TVNSQ 356 (526)
Q Consensus 278 ~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~yi~r~k~~~~ks~q~d~i~K~~eqMyaLlAIc~~l~P~~~~lDe-~I~~~ 356 (526)
.|+..||+|--+|.-++|.+|-..|...+.. .++.. .+...+....|..|.-+. ++ +++ .+...
T Consensus 13 ~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~------~~~~~------~~~k~~IL~yLIp~~Ll~-G~--iP~~~ll~~ 77 (203)
T 3t5x_A 13 RVTYKYYVGRKAMFDSDFKQAEEYLSFAFEH------CHRSS------QKNKRMILIYLLPVKMLL-GH--MPTVELLKK 77 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------SCTTC------HHHHHHHHHHHHHHHHHT-TC--EECHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH------CCHhH------HHHHHHHHHHHHHHHHHc-CC--CCCHHHhhh
Confidence 4678899999999999999999999998753 22211 122233333443333332 11 221 12111
Q ss_pred H-HHHhhHHHHHhhccChhhhcchHhhhhhcCCCcccCCCCCCCCCcCCcchHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q 009775 357 L-REKYGEKMIRMQRYDDEAFSIYDELFSYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRSFLK 435 (526)
Q Consensus 357 l-rEky~dk~~kmq~Gd~e~f~~~~elF~~acPKFIsp~~P~~~~~~~n~~~e~~~~Ql~~Fl~eV~~q~~l~~lRsyLK 435 (526)
- .+.|.+=....++||...| ++....-...|+... +-+-+ +......+|..+|
T Consensus 78 ~~~~~y~~L~~Avr~Gdl~~f---~~~l~~~~~~f~~~~-------------------~~lll----~rlr~~v~r~l~r 131 (203)
T 3t5x_A 78 YHLMQFAEVTRAVSEGNLLLL---HEALAKHEAFFIRCG-------------------IFLIL----EKLKIITYRNLFK 131 (203)
T ss_dssp TTCGGGHHHHHHHHHTCHHHH---HHHHHHTHHHHHHHT-------------------CHHHH----HTHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHhCCHHHH---HHHHHHhHHHHHHCC-------------------hHHHH----HHHHHHHHHHHHH
Confidence 1 1358888888999999999 877764333333321 11112 2233334444444
Q ss_pred ------hccccChhHHhccc------CCChhHHHHHHHHHhhc
Q 009775 436 ------VYSSLYLSELATYM------EVDEPTLRTILMTYKHK 466 (526)
Q Consensus 436 ------LYtti~l~KLAsfl------dvd~~~lr~~Ll~~K~k 466 (526)
=|+.|+++-++.-+ ++|++++...|...-..
T Consensus 132 kv~~~~~~~rI~l~~i~~~l~~~~~~~~~~~evE~ila~lI~~ 174 (203)
T 3t5x_A 132 KVYLLLKTHQLSLDAFLVALKFMQVEDVDIDEVQCILANLIYM 174 (203)
T ss_dssp HHHHHHCCSEEEHHHHHHHHHHTTCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHc
Confidence 28999999988555 35888887766554444
No 58
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.71 E-value=0.42 Score=38.97 Aligned_cols=64 Identities=16% Similarity=0.066 Sum_probs=49.3
Q ss_pred HHHHHHHHHHhhcccHHHHhhhccCc-ccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 238 FSMVGLLRVHCLLGDYHTGLKCLQPI-DITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 238 FSlIGLlRvh~LLGDY~~ALk~L~~I-dl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
-.+..+.+.+...|||..|++.++.. ++++.. .-...+++..|.+|+.+++|.+|+..|...+.
T Consensus 29 ~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~ 93 (148)
T 2dba_A 29 EQLRKEGNELFKCGDYGGALAAYTQALGLDATP------QDQAVLHRNRAACHLKLEDYDKAETEASKAIE 93 (148)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCH------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccc------hHHHHHHHHHHHHHHHHccHHHHHHHHHHHHh
Confidence 34566778888999999999988763 333311 01257788999999999999999999999875
No 59
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.40 E-value=0.3 Score=39.89 Aligned_cols=60 Identities=17% Similarity=0.164 Sum_probs=48.1
Q ss_pred HHHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
++..+..++..+|+|..|++.++. +++++ -+...++..|-+|+.+++|.+|++.|..++-
T Consensus 67 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~---------~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~ 127 (148)
T 2dba_A 67 LHRNRAACHLKLEDYDKAETEASKAIEKDG---------GDVKALYRRSQALEKLGRLDQAVLDLQRCVS 127 (148)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHTS---------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHhhCc---------cCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 445666778889999999998875 33332 2467789999999999999999999998874
No 60
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=90.40 E-value=0.56 Score=41.72 Aligned_cols=59 Identities=14% Similarity=0.053 Sum_probs=48.0
Q ss_pred HHHHHHHHhhcccHHHHhhhccCc-ccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQPI-DITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~I-dl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
...+..++..+|+|..|++.++.. ++++. ...+++..|-+|+.+++|.+|++.|...+-
T Consensus 142 ~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~---------~~~~~~~l~~~~~~~~~~~~A~~~~~~al~ 201 (258)
T 3uq3_A 142 ARLEGKEYFTKSDWPNAVKAYTEMIKRAPE---------DARGYSNRAAALAKLMSFPEAIADCNKAIE 201 (258)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCcc---------cHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 445667788899999999988873 33332 347889999999999999999999999875
No 61
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=90.37 E-value=0.24 Score=47.99 Aligned_cols=22 Identities=14% Similarity=0.040 Sum_probs=16.5
Q ss_pred HHHHHHHhhcccHHHHhhhccC
Q 009775 241 VGLLRVHCLLGDYHTGLKCLQP 262 (526)
Q Consensus 241 IGLlRvh~LLGDY~~ALk~L~~ 262 (526)
..+.++++.+|++..|++.++.
T Consensus 134 ~~l~~~~~~~g~~~~A~~~l~~ 155 (291)
T 3mkr_A 134 AMTVQILLKLDRLDLARKELKK 155 (291)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHH
Confidence 3455678888888888887766
No 62
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=90.26 E-value=0.31 Score=40.65 Aligned_cols=59 Identities=15% Similarity=0.199 Sum_probs=47.1
Q ss_pred HHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
...+..++..+|+|..|++.++. +++++ -+...++..|.+|+.+++|.+|+..|...+.
T Consensus 50 ~~~~a~~~~~~~~~~~A~~~~~~a~~~~~---------~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~ 109 (166)
T 1a17_A 50 YGNRSLAYLRTECYGYALGDATRAIELDK---------KYIKGYYRRAASNMALGKFRAALRDYETVVK 109 (166)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCT---------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCc---------ccHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 44566678889999999998876 33333 2356789999999999999999999999874
No 63
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=90.09 E-value=0.23 Score=40.45 Aligned_cols=71 Identities=18% Similarity=0.204 Sum_probs=52.9
Q ss_pred HHHHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHh
Q 009775 238 FSMVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLYIYK 311 (526)
Q Consensus 238 FSlIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~yi~r 311 (526)
.++..+..++..+|+|..|++.++. +++.+.. ..+.-....++..|.+|+.+++|.+|+..|...+....+
T Consensus 50 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~ 121 (164)
T 3ro3_A 50 IAYSNLGNAYIFLGEFETASEYYKKTLLLARQL---KDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQE 121 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT---TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh---CCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 3556677888999999999998876 3332211 122334567889999999999999999999998876433
No 64
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=90.00 E-value=0.58 Score=44.88 Aligned_cols=59 Identities=14% Similarity=0.246 Sum_probs=48.0
Q ss_pred HHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
...|.+++..+|+|..|++.++. +++++ -+..+++..|.+|..+++|.+|+..|...+.
T Consensus 216 ~~~l~~~~~~~g~~~~A~~~~~~al~~~p---------~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 275 (365)
T 4eqf_A 216 QTGLGVLFHLSGEFNRAIDAFNAALTVRP---------EDYSLWNRLGATLANGDRSEEAVEAYTRALE 275 (365)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCT---------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhCC---------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 45667888999999999998876 33333 2456789999999999999999999998775
No 65
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=89.92 E-value=0.48 Score=42.87 Aligned_cols=60 Identities=12% Similarity=0.010 Sum_probs=48.6
Q ss_pred HHHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
++..+.+++..+|+|..|++.++. +++++. +..+++..|.+|+.+++|.+|++.|...+.
T Consensus 45 ~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~---------~~~~~~~la~~~~~~~~~~~A~~~~~~al~ 105 (275)
T 1xnf_A 45 LLYERGVLYDSLGLRALARNDFSQALAIRPD---------MPEVFNYLGIYLTQAGNFDAAYEAFDSVLE 105 (275)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC---------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHcCCC---------cHHHHHHHHHHHHHccCHHHHHHHHHHHHh
Confidence 445677888999999999998876 333332 456788999999999999999999999876
No 66
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=89.60 E-value=0.95 Score=35.15 Aligned_cols=60 Identities=22% Similarity=0.298 Sum_probs=47.3
Q ss_pred HHHHHHHHHhhcccHHHHhhhccCc-ccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQPI-DITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~I-dl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
++..+.+++...|+|..|++.++.. ++++ -...+++..|-+|..+++|.+|+..|...+.
T Consensus 11 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~---------~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~ 71 (125)
T 1na0_A 11 AWYNLGNAYYKQGDYDEAIEYYQKALELDP---------NNAEAWYNLGNAYYKQGDYDEAIEYYQKALE 71 (125)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCT---------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHCc---------CcHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 4456677888999999999988763 2222 2345778899999999999999999998774
No 67
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=89.57 E-value=0.35 Score=44.66 Aligned_cols=63 Identities=16% Similarity=0.066 Sum_probs=49.0
Q ss_pred HHHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHH--------HhhHHHHHHHHHHHHH
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLM--------LRRYVDAIREFNKILL 307 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlM--------lrRY~DAir~F~~iL~ 307 (526)
+...|-.++..+|||..|++.++. |++.+.+. -....+|..|.+|+. +++|.+|+..|..++-
T Consensus 54 a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~------~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~ 125 (261)
T 3qky_A 54 AQFYLARAYYQNKEYLLAASEYERFIQIYQIDP------RVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFID 125 (261)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCT------THHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCc------hhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHH
Confidence 445666778889999999999887 33443321 113568999999999 9999999999999874
No 68
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=89.36 E-value=0.81 Score=45.13 Aligned_cols=69 Identities=16% Similarity=0.185 Sum_probs=48.9
Q ss_pred HHHHHHHHhhcccHHHHhhhccC-cccCCccc-c-----cccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQP-IDITQQGV-Y-----TSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLY 308 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l-~-----~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~y 308 (526)
+..+-.++...|+|..|++.++. |++++..- + ....+-.+.+++..|.||+.+++|.+|+..|..+|-.
T Consensus 150 ~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 225 (336)
T 1p5q_A 150 VKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALEL 225 (336)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 34455667789999999998765 44433210 0 0111223678999999999999999999999998863
No 69
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=89.19 E-value=0.8 Score=38.21 Aligned_cols=59 Identities=14% Similarity=0.121 Sum_probs=47.8
Q ss_pred HHHHHHHHhhcccHHHHhhhccCcc-cCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQPID-ITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~Id-l~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
+..+.+++...|+|..|++.++.+- +++ -...+++..|.+|+.++++.+|+..|...+.
T Consensus 11 ~~~~~~~~~~~~~~~~A~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~ 70 (186)
T 3as5_A 11 YRDKGISHAKAGRYSQAVMLLEQVYDADA---------FDVDVALHLGIAYVKTGAVDRGTELLERSLA 70 (186)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHTTTCCTTS---------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCc---------cChHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 3456677888999999999998743 332 2357789999999999999999999998775
No 70
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=89.14 E-value=0.87 Score=39.53 Aligned_cols=60 Identities=10% Similarity=0.004 Sum_probs=47.5
Q ss_pred HHHHHHHHHhhcccHHHHhhhccCc-ccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQPI-DITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~I-dl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
....+.+++..+|++..|++.++.. ++++ -+...++..|.+|+.+++|.+|+..|..++-
T Consensus 115 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~---------~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~ 175 (225)
T 2vq2_A 115 ANLNKGICSAKQGQFGLAEAYLKRSLAAQP---------QFPPAFKELARTKMLAGQLGDADYYFKKYQS 175 (225)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHST---------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCC---------CCchHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3456677888999999999988763 2222 2456788999999999999999999998775
No 71
>1ufm_A COP9 complex subunit 4; helix-turn-helix, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: a.4.5.47
Probab=88.97 E-value=0.21 Score=41.55 Aligned_cols=35 Identities=20% Similarity=0.324 Sum_probs=30.9
Q ss_pred hhhhhhhhccccChhHHhcccCCChhHHHHHHHHH
Q 009775 429 GVRSFLKVYSSLYLSELATYMEVDEPTLRTILMTY 463 (526)
Q Consensus 429 ~lRsyLKLYtti~l~KLAsfldvd~~~lr~~Ll~~ 463 (526)
+||.+.|.|++|+++.||.+++++++++...|..+
T Consensus 20 nl~~is~~Y~~Isl~~La~ll~ls~~~vE~~ls~m 54 (84)
T 1ufm_A 20 NLLSASKLYNNITFEELGALLEIPAAKAEKIASQM 54 (84)
T ss_dssp HHHHHHHSCSEEEHHHHHHHTTSCHHHHHHHHHHH
T ss_pred HHHHHHHhcCeeeHHHHHHHHCcCHHHHHHHHHHH
Confidence 67789999999999999999999999988776554
No 72
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=88.90 E-value=2.6 Score=39.77 Aligned_cols=66 Identities=12% Similarity=-0.027 Sum_probs=48.1
Q ss_pred HHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q 009775 242 GLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLYIY 310 (526)
Q Consensus 242 GLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~yi~ 310 (526)
++..++...|||..|++.++. +++..+. ..+.-...+++..|.+|..+++|.+|+..|...+-...
T Consensus 120 ~~~~~~~~~~~~~~A~~~~~~al~~~~~~---~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~ 186 (293)
T 2qfc_A 120 YVAAYVLKKVDYEYCILELKKLLNQQLTG---IDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLE 186 (293)
T ss_dssp HHHHHHHTSSCHHHHHHHHHHHHTTCCCS---SCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHhcC---CchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 356678899999999998654 3443321 11112356889999999999999999999999886543
No 73
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=88.86 E-value=0.43 Score=43.17 Aligned_cols=56 Identities=14% Similarity=0.144 Sum_probs=46.9
Q ss_pred HHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 243 LLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 243 LlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
|-+++..+|+|..|++.++. |++++ -++..++..|-+|+.+++|.+|+..|..++-
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~p---------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 116 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKAP---------NNVDCLEACAEMQVCRGQEKDALRMYEKILQ 116 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCT---------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCC---------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 66788899999999998876 34443 3467889999999999999999999999874
No 74
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=88.70 E-value=0.55 Score=40.54 Aligned_cols=55 Identities=15% Similarity=0.266 Sum_probs=45.5
Q ss_pred HHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 244 LRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 244 lRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
-.++...|||..|++..+. |++++. ++..++..|.+|+.++++.+|+..+...+.
T Consensus 12 G~~~~~~g~~~~A~~~~~~al~~~p~---------~~~~~~~la~~~~~~~~~~~a~~~~~~~~~ 67 (184)
T 3vtx_A 12 GDKKRTKGDFDGAIRAYKKVLKADPN---------NVETLLKLGKTYMDIGLPNDAIESLKKFVV 67 (184)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCC---------CHHHHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 3567789999999999876 455443 467789999999999999999999998765
No 75
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=88.67 E-value=0.45 Score=39.70 Aligned_cols=58 Identities=9% Similarity=-0.043 Sum_probs=46.7
Q ss_pred HHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 241 VGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 241 IGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
..+-+.+.-.|+|..|++.++. |.+++ -+...++..|-+|+.++++.+|+..|...+-
T Consensus 21 ~~~g~~~~~~g~~~~A~~~~~~al~~~P---------~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~ 79 (121)
T 1hxi_A 21 MEEGLSMLKLANLAEAALAFEAVCQKEP---------EREEAWRSLGLTQAENEKDGLAIIALNHARM 79 (121)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHST---------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCC---------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3455677789999999999876 23333 2467889999999999999999999998775
No 76
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=88.64 E-value=0.5 Score=36.81 Aligned_cols=60 Identities=22% Similarity=0.298 Sum_probs=47.1
Q ss_pred HHHHHHHHHhhcccHHHHhhhccCc-ccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQPI-DITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~I-dl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
+...+.+++...|+|..|++.++.. ++++ -...+++..|-+|..++++.+|+..|..++.
T Consensus 45 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~~---------~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~ 105 (125)
T 1na0_A 45 AWYNLGNAYYKQGDYDEAIEYYQKALELDP---------NNAEAWYNLGNAYYKQGDYDEAIEYYQKALE 105 (125)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCT---------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHhCC---------ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 3456677888899999999988763 2332 2345778999999999999999999998774
No 77
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=88.60 E-value=0.45 Score=41.16 Aligned_cols=59 Identities=14% Similarity=0.153 Sum_probs=47.4
Q ss_pred HHHHHHHHhhcccHHHHhhhccCc-ccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQPI-DITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~I-dl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
+..+.+++.-.|+|..|++.++.+ .+++ -+...++..|-+|..+++|.+|+..|...+.
T Consensus 24 ~~~~g~~~~~~g~~~~A~~~~~~al~~~p---------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 83 (148)
T 2vgx_A 24 LYSLAFNQYQSGXYEDAHXVFQALCVLDH---------YDSRFFLGLGACRQAMGQYDLAIHSYSYGAV 83 (148)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCT---------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHcCc---------ccHHHHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 455667888899999999988753 3333 2456678999999999999999999999875
No 78
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=88.31 E-value=0.66 Score=36.30 Aligned_cols=59 Identities=22% Similarity=0.245 Sum_probs=45.2
Q ss_pred HHHHHHHHhhcccHHHHhhhccCcc-cCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQPID-ITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~Id-l~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
...+.+++...|++..|++.++..- +++ -...+++..|.+|..+++|.+|++.|...+.
T Consensus 38 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~---------~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~ 97 (136)
T 2fo7_A 38 WYNLGNAYYKQGDYDEAIEYYQKALELDP---------RSAEAWYNLGNAYYKQGDYDEAIEYYQKALE 97 (136)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCT---------TCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHCC---------CchHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 3456777888999999999887632 222 2345678889999999999999999988764
No 79
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=88.29 E-value=0.21 Score=44.91 Aligned_cols=70 Identities=13% Similarity=-0.015 Sum_probs=52.4
Q ss_pred HHHHHHHHHhhcccHHHHhhhccCc-ccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQPI-DITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLYI 309 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~I-dl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~yi 309 (526)
++..|..++..+|+|..|++.++.. ++.+ ..+..-.+-...+++..|.+|+.+++|.+|+..|...+-..
T Consensus 45 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~-~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 115 (283)
T 3edt_B 45 MLNILALVYRDQNKYKEAAHLLNDALAIRE-KTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIR 115 (283)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HHTCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHHHH-HHcCCcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 4456677889999999999988763 2321 11112234567789999999999999999999999988754
No 80
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=88.26 E-value=0.48 Score=42.86 Aligned_cols=59 Identities=10% Similarity=0.026 Sum_probs=47.9
Q ss_pred HHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
...|..++..+|+|..|++.++. +++++. +..+++..|.+|+.+++|.+|++.|..++.
T Consensus 80 ~~~la~~~~~~~~~~~A~~~~~~al~~~~~---------~~~~~~~la~~~~~~g~~~~A~~~~~~a~~ 139 (275)
T 1xnf_A 80 FNYLGIYLTQAGNFDAAYEAFDSVLELDPT---------YNYAHLNRGIALYYGGRDKLAQDDLLAFYQ 139 (275)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------CTHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHhcCcc---------ccHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 44566788899999999998876 333332 357889999999999999999999999875
No 81
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=88.24 E-value=0.41 Score=47.32 Aligned_cols=61 Identities=18% Similarity=0.281 Sum_probs=50.2
Q ss_pred HHHHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 238 FSMVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 238 FSlIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
-+...|..++..+|+|..|++.++. |++++. +...+|..|-+|+.+++|.+|+..|...|-
T Consensus 197 ~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~---------~~~a~~~lg~~~~~~g~~~~A~~~~~~al~ 258 (336)
T 1p5q_A 197 ASHLNLAMCHLKLQAFSAAIESCNKALELDSN---------NEKGLSRRGEAHLAVNDFELARADFQKVLQ 258 (336)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---------cHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 3556677888999999999998876 344432 467889999999999999999999999875
No 82
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=88.13 E-value=0.24 Score=49.26 Aligned_cols=64 Identities=19% Similarity=0.223 Sum_probs=46.2
Q ss_pred HHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 009775 245 RVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLY 308 (526)
Q Consensus 245 Rvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~y 308 (526)
.++.++|+|..|++.++. +++.++.--....+-.+.++...|.+|..+++|.+|+..|..++.-
T Consensus 59 ~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i 123 (472)
T 4g1t_A 59 YLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHV 123 (472)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence 477889999999998864 5553321111112223456788999999999999999999988753
No 83
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=88.02 E-value=0.28 Score=44.14 Aligned_cols=69 Identities=14% Similarity=0.011 Sum_probs=52.3
Q ss_pred HHHHHHHHHhhcccHHHHhhhccCc-ccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQPI-DITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLY 308 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~I-dl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~y 308 (526)
++..|..++..+|+|..|++.++.. ++.+ .......+-...+++..|-+|+.+++|.+|+..|..++-.
T Consensus 129 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~-~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~ 198 (283)
T 3edt_B 129 QLNNLALLCQNQGKAEEVEYYYRRALEIYA-TRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTR 198 (283)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHHH-HHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-HhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 4566778899999999999988762 3311 1111224456778999999999999999999999998864
No 84
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=87.84 E-value=0.55 Score=40.83 Aligned_cols=60 Identities=12% Similarity=-0.020 Sum_probs=47.3
Q ss_pred HHHHHHHHHhhcccHHHHhhhccCc-ccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQPI-DITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~I-dl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
+...+.+++...|+|..|++.++.. ++++. ...+++..|-+|+.+++|.+|+..|..++.
T Consensus 10 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~---------~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~ 70 (225)
T 2vq2_A 10 IKTQLAMEYMRGQDYRQATASIEDALKSDPK---------NELAWLVRAEIYQYLKVNDKAQESFRQALS 70 (225)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHhCcc---------chHHHHHHHHHHHHcCChHHHHHHHHHHHH
Confidence 3456677888899999999988763 33332 345788999999999999999999998875
No 85
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=87.39 E-value=0.47 Score=49.13 Aligned_cols=60 Identities=20% Similarity=0.429 Sum_probs=48.7
Q ss_pred HHHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
+...|..++..+|+|..|++.++. |++++. ++..+|..|-||+.+++|.+|+..|...|-
T Consensus 319 ~~~nla~~~~~~g~~~~A~~~~~~al~~~p~---------~~~a~~~~g~a~~~~g~~~~A~~~~~~al~ 379 (457)
T 1kt0_A 319 AFLNLAMCYLKLREYTKAVECCDKALGLDSA---------NEKGLYRRGEAQLLMNEFESAKGDFEKVLE 379 (457)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT---------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCc---------cHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 445566778889999999998876 444443 467899999999999999999999999773
No 86
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=87.34 E-value=0.88 Score=47.06 Aligned_cols=107 Identities=14% Similarity=0.083 Sum_probs=61.0
Q ss_pred HHHHHHHHHhhcccHHHHhhhccC-cccCCccc------ccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHh
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQP-IDITQQGV------YTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLYIYK 311 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l------~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~yi~r 311 (526)
++..+-..+...|+|..|++..+. |++++..- -.....-.+.+++..|.||+.+++|.+|+..|..+|..-..
T Consensus 270 ~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~ 349 (457)
T 1kt0_A 270 IVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSA 349 (457)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCc
Confidence 344556677889999999987764 33332110 00111223688999999999999999999999998863111
Q ss_pred -hcccccCChhHHHHhhHHHHHHHHHHHHHhhCCCC
Q 009775 312 -TKQYHQKSPQYEQILKKNEQMYALLAICLSLCPQV 346 (526)
Q Consensus 312 -~k~~~~ks~q~d~i~K~~eqMyaLlAIc~~l~P~~ 346 (526)
.+.+..+..-+- -.+..++....+--++.+.|..
T Consensus 350 ~~~a~~~~g~a~~-~~g~~~~A~~~~~~al~l~P~~ 384 (457)
T 1kt0_A 350 NEKGLYRRGEAQL-LMNEFESAKGDFEKVLEVNPQN 384 (457)
T ss_dssp CHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTTC---
T ss_pred cHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhCCCC
Confidence 111111110111 1123344455555567788854
No 87
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=87.27 E-value=0.42 Score=38.80 Aligned_cols=70 Identities=19% Similarity=0.250 Sum_probs=51.6
Q ss_pred HHHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHh
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLYIYK 311 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~yi~r 311 (526)
++..+..++...|+|..|++.++. +++.++. ..+.-....++.+|.+|+.+++|.+|++.|...+-...+
T Consensus 11 ~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~---~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 81 (164)
T 3ro3_A 11 AFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEF---GDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQ 81 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH---TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh---CCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 445566778889999999998865 4443321 112233467889999999999999999999998875443
No 88
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=87.26 E-value=0.76 Score=42.32 Aligned_cols=62 Identities=10% Similarity=0.139 Sum_probs=48.4
Q ss_pred HHHHHHHHhhcccHHHHhhhccCc-ccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQPI-DITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~I-dl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
+..+-+.+...|+|..|++.++.+ +..+.. +-....+|..|.+|+.+++|.+|+..|..++.
T Consensus 18 ~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~------~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~ 80 (261)
T 3qky_A 18 AFERAMEFYNQGKYDRAIEYFKAVFTYGRTH------EWAADAQFYLARAYYQNKEYLLAASEYERFIQ 80 (261)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHGGGCSCS------TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC------cchHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 345566778899999999998874 333321 12256789999999999999999999999875
No 89
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=86.71 E-value=0.78 Score=35.87 Aligned_cols=59 Identities=22% Similarity=0.282 Sum_probs=45.9
Q ss_pred HHHHHHHHhhcccHHHHhhhccCc-ccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQPI-DITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~I-dl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
...+..++...||+..|++.++.. +.++ -....++.+|.+|...+++.+|++.|...+.
T Consensus 4 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~---------~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~ 63 (136)
T 2fo7_A 4 WYNLGNAYYKQGDYDEAIEYYQKALELDP---------RSAEAWYNLGNAYYKQGDYDEAIEYYQKALE 63 (136)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCT---------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCcHHHHHHHHHHHHHcCC---------cchhHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 345566788899999999988763 2222 2345778899999999999999999998764
No 90
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=86.65 E-value=0.39 Score=44.07 Aligned_cols=71 Identities=15% Similarity=0.027 Sum_probs=53.2
Q ss_pred HHHHHHHHHHhhcccHHHHhhhccCc-ccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 009775 238 FSMVGLLRVHCLLGDYHTGLKCLQPI-DITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLYI 309 (526)
Q Consensus 238 FSlIGLlRvh~LLGDY~~ALk~L~~I-dl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~yi 309 (526)
.++..|.+++..+|+|..|++.++.. ++.+ .......+....+++..|-+|+.+++|.+|++.|...+-..
T Consensus 154 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~-~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 225 (311)
T 3nf1_A 154 KQLNNLALLCQNQGKYEEVEYYYQRALEIYQ-TKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRA 225 (311)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH-HTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-HHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 35566778899999999999988763 2211 11112244556788999999999999999999999988643
No 91
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=86.12 E-value=2.7 Score=40.20 Aligned_cols=60 Identities=8% Similarity=0.069 Sum_probs=49.0
Q ss_pred HHHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
++..|.+++..+|+|..|++.++. +++++ -+...++..|-+|..+++|.+|+..|...+-
T Consensus 101 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p---------~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 161 (365)
T 4eqf_A 101 AWQFLGITQAENENEQAAIVALQRCLELQP---------NNLKALMALAVSYTNTSHQQDACEALKNWIK 161 (365)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCT---------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhcCC---------CCHHHHHHHHHHHHccccHHHHHHHHHHHHH
Confidence 345677788899999999999876 33433 2356789999999999999999999999876
No 92
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=86.01 E-value=5.9 Score=39.57 Aligned_cols=56 Identities=16% Similarity=0.217 Sum_probs=46.2
Q ss_pred HHHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHH
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFN 303 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~ 303 (526)
+...+.+++..+|+|..|++.++. +++++ -++..++..|-+|+.+++|.+|++.|.
T Consensus 61 ~~~~la~~~~~~g~~~~A~~~~~~al~~~p---------~~~~~~~~la~~~~~~g~~~~A~~~~~ 117 (537)
T 3fp2_A 61 FYSNISACYISTGDLEKVIEFTTKALEIKP---------DHSKALLRRASANESLGNFTDAMFDLS 117 (537)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCT---------TCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCC---------chHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 456667788889999999999886 33433 356789999999999999999999995
No 93
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=86.00 E-value=0.54 Score=40.65 Aligned_cols=70 Identities=10% Similarity=-0.005 Sum_probs=51.8
Q ss_pred HHHHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q 009775 238 FSMVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLYIY 310 (526)
Q Consensus 238 FSlIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~yi~ 310 (526)
.++..|-.++..+|||..|++.++. +++.++. ..+.....++...|-+|+.+++|.+|++.|...+-...
T Consensus 108 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~---~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 178 (203)
T 3gw4_A 108 ANAYEVATVALHFGDLAGARQEYEKSLVYAQQA---DDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFA 178 (203)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT---TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc---cchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHH
Confidence 3566777889999999999998876 3332211 11223345678999999999999999999999887543
No 94
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=85.97 E-value=1 Score=42.68 Aligned_cols=69 Identities=13% Similarity=0.132 Sum_probs=51.4
Q ss_pred HHHHHHHHHhhcccHHHHhhhccCc-ccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQPI-DITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLYI 309 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~I-dl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~yi 309 (526)
++.+|-.++..+|+|..|++..+.. ++.++ +.....-.++++|.+|.+|..+++|.+|+..|...+-..
T Consensus 157 ~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~--~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~ 226 (293)
T 3u3w_A 157 IENAIANIYAENGYLKKGIDLFEQILKQLEA--LHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEIS 226 (293)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh--cccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 3556667888999999999877652 22111 011345567799999999999999999999999988754
No 95
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=85.78 E-value=0.71 Score=41.39 Aligned_cols=56 Identities=7% Similarity=-0.049 Sum_probs=45.8
Q ss_pred HHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 243 LLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 243 LlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
+-.++..+|||..|++.++. +++++ -+..+++..|.+|+.+++|.+|+..|...+-
T Consensus 48 ~~~~~~~~~~~~~A~~~~~~al~~~p---------~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~ 104 (228)
T 4i17_A 48 CGVCADNIKKYKEAADYFDIAIKKNY---------NLANAYIGKSAAYRDMKNNQEYIATLTEGIK 104 (228)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTTC---------SHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcHHHHHHHHHHHHHhCc---------chHHHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 45567789999999998775 33333 3567899999999999999999999999875
No 96
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=85.77 E-value=1 Score=43.09 Aligned_cols=59 Identities=10% Similarity=0.171 Sum_probs=47.8
Q ss_pred HHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 009775 241 VGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLY 308 (526)
Q Consensus 241 IGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~y 308 (526)
..+..++..+|+|..|++.++. +++++ -+...+|..|-+|+.+++|.+|++.|...+--
T Consensus 42 ~~la~~~~~~~~~~~A~~~~~~al~~~p---------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l 101 (281)
T 2c2l_A 42 TNRALCYLKMQQPEQALADCRRALELDG---------QSVKAHFFLGQCQLEMESYDEAIANLQRAYSL 101 (281)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTTSCT---------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhCC---------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 4555677889999999998876 44443 34567899999999999999999999998753
No 97
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=85.70 E-value=0.37 Score=44.22 Aligned_cols=71 Identities=13% Similarity=0.058 Sum_probs=53.5
Q ss_pred HHHHHHHHHHhhcccHHHHhhhccCc-ccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 009775 238 FSMVGLLRVHCLLGDYHTGLKCLQPI-DITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLYI 309 (526)
Q Consensus 238 FSlIGLlRvh~LLGDY~~ALk~L~~I-dl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~yi 309 (526)
-++..+.+++...|+|..|++.++.. ++.++ ...........+++..|.+|+.+++|.+|+..|...+...
T Consensus 28 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~-~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 99 (311)
T 3nf1_A 28 RTLHNLVIQYASQGRYEVAVPLCKQALEDLEK-TSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIR 99 (311)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-HHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-HcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 35667778889999999999988763 22111 0001245567889999999999999999999999988654
No 98
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=85.68 E-value=0.89 Score=40.83 Aligned_cols=59 Identities=10% Similarity=0.043 Sum_probs=46.7
Q ss_pred HHHHHHHHHhhcccHHHHhhhccCc-ccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQPI-DITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKIL 306 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~I-dl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL 306 (526)
....+.+++..+|++..|++.++.. ++++ -+..+++..|-+|+.+++|.+|+..|..++
T Consensus 143 ~~~~la~~~~~~g~~~~A~~~~~~~~~~~~---------~~~~~~~~la~~~~~~g~~~~A~~~~~~~~ 202 (252)
T 2ho1_A 143 VFENLGLVSLQMKKPAQAKEYFEKSLRLNR---------NQPSVALEMADLLYKEREYVPARQYYDLFA 202 (252)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCS---------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCc---------ccHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3456677888999999999988763 3332 235678899999999999999999999865
No 99
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=85.36 E-value=1.8 Score=40.20 Aligned_cols=65 Identities=12% Similarity=0.077 Sum_probs=50.7
Q ss_pred HHHHHHHHHhhcccHHHHhhhccCc-ccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQPI-DITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLY 308 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~I-dl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~y 308 (526)
+.+.+..++...|+|..|++.++.. ++++. .+......++..|-+|..+++|.+|+..|..++-.
T Consensus 236 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-----~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 301 (359)
T 3ieg_A 236 KLIESAEELIRDGRYTDATSKYESVMKTEPS-----VAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQM 301 (359)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-----SHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-----chHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 3456678899999999999998863 33332 23444566788999999999999999999998753
No 100
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=85.34 E-value=3.5 Score=42.61 Aligned_cols=190 Identities=11% Similarity=0.057 Sum_probs=103.4
Q ss_pred HHHHHHHHHHhhcccHHHHhhhccCccc--CCccccccc-ccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhcc
Q 009775 238 FSMVGLLRVHCLLGDYHTGLKCLQPIDI--TQQGVYTSV-IGSHITTIYHYGFANLMLRRYVDAIREFNKILLYIYKTKQ 314 (526)
Q Consensus 238 FSlIGLlRvh~LLGDY~~ALk~L~~Idl--~~k~l~~~V-~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~yi~r~k~ 314 (526)
+..+.+.|++..+||...|-+.|+.+.- +..+ -+ +..|-..|+..|--|...+.|+.+-+.+...|..+.-...
T Consensus 128 ~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~---~~~~~v~~~~y~~~~~~~~~~~~~a~~y~~~l~~l~~~~~~~~ 204 (393)
T 4b4t_O 128 LIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKD---SIPLRITNSFYSTNSQYFKFKNDFNSFYYTSLLYLSTLEPSTS 204 (393)
T ss_dssp HHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSC---CSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSS
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhccC---CccHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhcccccc
Confidence 4556778888899999999999988762 2211 12 2344444444455555666787777766665544322111
Q ss_pred cccCChhHHHHhhHHHHHHHHHHHHHhhCCCCcchhhH----HHHHHH-----HHhhHHHHHhhccChhhhcchHhhhhh
Q 009775 315 YHQKSPQYEQILKKNEQMYALLAICLSLCPQVKHVEET----VNSQLR-----EKYGEKMIRMQRYDDEAFSIYDELFSY 385 (526)
Q Consensus 315 ~~~ks~q~d~i~K~~eqMyaLlAIc~~l~P~~~~lDe~----I~~~lr-----Eky~dk~~kmq~Gd~e~f~~~~elF~~ 385 (526)
. + .. .....-..+++|..+.|.-...+|= +.+.|+ +.+-+-+.-...||...| +++-..
T Consensus 205 ~---~-~~-----~~~~~a~~l~~~all~~~i~~f~eLL~~p~i~~L~~~~~~~~l~~Ll~~f~~g~~~~f---~~~~~~ 272 (393)
T 4b4t_O 205 I---T-LA-----ERQQLAYDLSISALLGDKIYNFGELLHHPIMETIVNDSNYDWLFQLLNALTVGDFDKF---DSLIKV 272 (393)
T ss_dssp C---S-HH-----HHHHHHHHHHHHHHHCCSSCSTHHHHHSCCTTSSCSSSSTTHHHHHHHHHHHTCHHHH---HHHCCH
T ss_pred C---C-HH-----HHHHHHHHHHHHHHcCCCCCChHHHhCChHHHHhhcCCchHHHHHHHHHHhcCCHHHH---HHHHHH
Confidence 1 1 11 1122334556677777743223332 222232 235567778899998888 543211
Q ss_pred cCCCcccCCCCCCCCCcCCcchHHHHHHHHHHHHHHHHhhhhhhhhh--hhhhccccChhHHhcccCCChhHHHHHHHHH
Q 009775 386 ACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRS--FLKVYSSLYLSELATYMEVDEPTLRTILMTY 463 (526)
Q Consensus 386 acPKFIsp~~P~~~~~~~n~~~e~~~~Ql~~Fl~eV~~q~~l~~lRs--yLKLYtti~l~KLAsfldvd~~~lr~~Ll~~ 463 (526)
-.+ . ......+....+ +...+-++.+ +.+-|.+|+.+.+|..++++++++...++-+
T Consensus 273 ~~~----~-------------~~~l~~~~~~l~----~kirll~l~~l~~~~~~~~i~f~~ia~~l~i~~~evE~lli~a 331 (393)
T 4b4t_O 273 QIS----K-------------IPILAQHESFLR----QKICLMTLIETVFVKNIRMLSFEDISKATHLPKDNVEHLVMRA 331 (393)
T ss_dssp HHH----H-------------SHHHHHHHHHHH----HHHHHHHHHHHHCSSSCCCEEHHHHHHHHTCCHHHHHHHHHHH
T ss_pred hhh----h-------------CcchhhhHHHHH----HHHHHHHHHHHhccCCCCcCcHHHHHHHhCcCHHHHHHHHHHH
Confidence 100 0 001111112222 2222233322 2345889999999999999999987666544
No 101
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=85.19 E-value=1.8 Score=42.26 Aligned_cols=77 Identities=5% Similarity=-0.089 Sum_probs=57.2
Q ss_pred HhhhHHHHHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHh
Q 009775 233 KVLGYFSMVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLYIYK 311 (526)
Q Consensus 233 ~mLGYFSlIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~yi~r 311 (526)
..+.|+-..-+-.++...|||..|++.++. +++-++. ..+.-...+++..|.+|..+++|.+|+..|...+-...+
T Consensus 99 ~~l~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~---~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~ 175 (383)
T 3ulq_A 99 GLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFV---KDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKE 175 (383)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGC---CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhC---CCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh
Confidence 356666666677888999999999988766 3332211 112345678999999999999999999999999876444
Q ss_pred h
Q 009775 312 T 312 (526)
Q Consensus 312 ~ 312 (526)
.
T Consensus 176 ~ 176 (383)
T 3ulq_A 176 H 176 (383)
T ss_dssp C
T ss_pred C
Confidence 3
No 102
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=85.19 E-value=1.7 Score=39.35 Aligned_cols=59 Identities=7% Similarity=0.040 Sum_probs=45.8
Q ss_pred HHHHHHHHhhcccHHHHhhhccCc-ccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQPI-DITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~I-dl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
++.+...+...|+|..|++.++.+ ++++. +...++..|-+|+.+++|.+|+..|...+.
T Consensus 6 ~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~---------~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~ 65 (272)
T 3u4t_A 6 EFRYADFLFKNNNYAEAIEVFNKLEAKKYN---------SPYIYNRRAVCYYELAKYDLAQKDIETYFS 65 (272)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHTTCC---------CSTTHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCCC---------cHHHHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 345667778899999999988763 33332 345788899999999999999999998875
No 103
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=84.94 E-value=0.31 Score=39.78 Aligned_cols=52 Identities=15% Similarity=0.002 Sum_probs=37.1
Q ss_pred cccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 250 LGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 250 LGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
+|+|..|++.++. |+++.. .+-+...++..|.+|+.+++|.+|+..|...+-
T Consensus 3 ~g~~~~A~~~~~~al~~~~~------~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~ 55 (117)
T 3k9i_A 3 LGLEAQAVPYYEKAIASGLQ------GKDLAECYLGLGSTFRTLGEYRKAEAVLANGVK 55 (117)
T ss_dssp ----CCCHHHHHHHHSSCCC------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCC------CccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 6888888887765 333210 234567899999999999999999999999875
No 104
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=84.93 E-value=0.87 Score=40.43 Aligned_cols=60 Identities=7% Similarity=0.103 Sum_probs=48.8
Q ss_pred HHHHHHHHHhhcccHHHHhhhccCc-ccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQPI-DITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~I-dl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
....+.+++..+|+|..|++.++.. ++++ -+...++..|.+|+.++++.+|+..|..++-
T Consensus 175 ~~~~l~~~~~~~~~~~~A~~~~~~al~~~~---------~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 235 (258)
T 3uq3_A 175 GYSNRAAALAKLMSFPEAIADCNKAIEKDP---------NFVRAYIRKATAQIAVKEYASALETLDAART 235 (258)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCT---------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHhCH---------HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 3456678889999999999998763 3333 2456789999999999999999999999875
No 105
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=84.75 E-value=0.94 Score=41.22 Aligned_cols=57 Identities=18% Similarity=0.162 Sum_probs=45.7
Q ss_pred HHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 241 VGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 241 IGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
..|-+++..+|++..|++.++. ++++ . +...++..|-+|+.++||.+|+..|...+-
T Consensus 122 ~~lg~~~~~~g~~~~A~~~~~~al~~~-~---------~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 179 (217)
T 2pl2_A 122 LQRGLVYALLGERDKAEASLKQALALE-D---------TPEIRSALAELYLSMGRLDEALAQYAKALE 179 (217)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHC-C---------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCChHHHHHHHHHHHhcc-c---------chHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4566778899999999998876 3444 2 345678999999999999999999998874
No 106
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=84.73 E-value=0.9 Score=41.19 Aligned_cols=63 Identities=11% Similarity=0.002 Sum_probs=47.4
Q ss_pred HHHHHHHHhhcccHHHHhhhccCcccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQPIDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
+..+.+++..+|+|..|++.++..--.. .-+......++..|-+|+.+++|.+|+..|...+-
T Consensus 40 ~~~l~~~~~~~~~~~~A~~~~~~a~~~~-----~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~ 102 (272)
T 3u4t_A 40 YNRRAVCYYELAKYDLAQKDIETYFSKV-----NATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVD 102 (272)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTS-----CTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHhcc-----CchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHh
Confidence 3455568889999999999887632211 12333455688999999999999999999999875
No 107
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=84.72 E-value=0.91 Score=37.85 Aligned_cols=58 Identities=19% Similarity=0.191 Sum_probs=39.0
Q ss_pred HHHHHHHhhcccHHHHhhhccCc-ccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 241 VGLLRVHCLLGDYHTGLKCLQPI-DITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 241 IGLlRvh~LLGDY~~ALk~L~~I-dl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
..+.+++...|++..|++.++.+ ++++ -+..+++..|.+|..+++|.+|+..|...+.
T Consensus 80 ~~~a~~~~~~~~~~~A~~~~~~~~~~~~---------~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~ 138 (186)
T 3as5_A 80 TVLGLTYVQVQKYDLAVPLLIKVAEANP---------INFNVRFRLGVALDNLGRFDEAIDSFKIALG 138 (186)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCT---------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhcCc---------HhHHHHHHHHHHHHHcCcHHHHHHHHHHHHh
Confidence 44556677778888888777653 2222 1345667778888888888888888777663
No 108
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=84.63 E-value=0.76 Score=39.68 Aligned_cols=69 Identities=13% Similarity=0.077 Sum_probs=52.0
Q ss_pred HHHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLYIY 310 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~yi~ 310 (526)
++..+-.++...|||..|+..++. +++-++. ..+.....+++..|.+|+.+++|.+|++.|...+-...
T Consensus 28 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~---~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 97 (203)
T 3gw4_A 28 ARFMLGYVYAFMDRFDEARASFQALQQQAQKS---GDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLA 97 (203)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTT---CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHc---CCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 455667788899999999988765 3432211 12445567889999999999999999999999887543
No 109
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=84.03 E-value=1.4 Score=38.88 Aligned_cols=60 Identities=17% Similarity=0.249 Sum_probs=48.2
Q ss_pred HHHHHHHHHhhcccHHHHhhhccCc-ccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQPI-DITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~I-dl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
+...+.+++..+|+|..|++.++.. ++++ -...+++..|-+|+.+++|.+|++.|..++-
T Consensus 59 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~~---------~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~ 119 (243)
T 2q7f_A 59 PYINFANLLSSVNELERALAFYDKALELDS---------SAATAYYGAGNVYVVKEMYKEAKDMFEKALR 119 (243)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCT---------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHcCC---------cchHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 4556778888999999999988763 3332 2457788899999999999999999998775
No 110
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=84.03 E-value=1 Score=41.70 Aligned_cols=59 Identities=8% Similarity=0.033 Sum_probs=46.0
Q ss_pred HHHHHHHHhhcccHHHHhhhccCc-ccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQPI-DITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~I-dl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
...+.+++..+|+|..|++.++.. ++.+. ....++..|.+|+.+++|.+|+..|..++-
T Consensus 128 ~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~---------~~~~~~~l~~~~~~~~~~~~A~~~~~~al~ 187 (330)
T 3hym_B 128 WIAYGHSFAVESEHDQAMAAYFTAAQLMKG---------CHLPMLYIGLEYGLTNNSKLAERFFSQALS 187 (330)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHTTT---------CSHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHhccc---------cHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 456678888999999999988762 23322 345577799999999999999999998764
No 111
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=83.95 E-value=3.3 Score=35.45 Aligned_cols=87 Identities=13% Similarity=0.090 Sum_probs=53.7
Q ss_pred HHHHH-HhhcccH--HHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhccccc
Q 009775 242 GLLRV-HCLLGDY--HTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLYIYKTKQYHQ 317 (526)
Q Consensus 242 GLlRv-h~LLGDY--~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~yi~r~k~~~~ 317 (526)
.+..+ +...|+| ..|++.++. +++++ -+...++..|.+|+.+++|.+|+..|..++-. ..
T Consensus 83 ~la~~l~~~~~~~~~~~A~~~~~~al~~~p---------~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~-------~p 146 (177)
T 2e2e_A 83 ALATVLYYQASQHMTAQTRAMIDKALALDS---------NEITALMLLASDAFMQANYAQAIELWQKVMDL-------NS 146 (177)
T ss_dssp HHHHHHHHHTTTCCCHHHHHHHHHHHHHCT---------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT-------CC
T ss_pred HHHHHHHHhcCCcchHHHHHHHHHHHHhCC---------CcHHHHHHHHHHHHHcccHHHHHHHHHHHHhh-------CC
Confidence 33444 5567888 888887765 23332 23456778888888888888888888887642 11
Q ss_pred CChhHHHHhhHHHHHHHHHHHHHhhCC
Q 009775 318 KSPQYEQILKKNEQMYALLAICLSLCP 344 (526)
Q Consensus 318 ks~q~d~i~K~~eqMyaLlAIc~~l~P 344 (526)
.......+....+++-.+...|+...|
T Consensus 147 ~~~~~~~~~~~i~~~~~~~~~~~~~~~ 173 (177)
T 2e2e_A 147 PRINRTQLVESINMAKLLQRRSDLEHH 173 (177)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCccHHHHHHHHHHHHHhcCCCCCCCC
Confidence 111223444555666666666665554
No 112
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=83.75 E-value=1.1 Score=45.28 Aligned_cols=60 Identities=13% Similarity=0.241 Sum_probs=47.9
Q ss_pred HHHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
++..|..++..+|+|..|++.++. |++++ -+...+|..|-+|+.+++|.+|+..|...+-
T Consensus 275 ~~~nla~~~~~~g~~~~A~~~~~~al~~~p---------~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~ 335 (370)
T 1ihg_A 275 CVLNIGACKLKMSDWQGAVDSCLEALEIDP---------SNTKALYRRAQGWQGLKEYDQALADLKKAQE 335 (370)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTCT---------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHhCc---------hhHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 445566778889999999998765 34433 2467789999999999999999999998764
No 113
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=83.68 E-value=1.5 Score=40.85 Aligned_cols=60 Identities=10% Similarity=0.034 Sum_probs=49.2
Q ss_pred HHHHHHHHHhhcccHHHHhhhccCc-ccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQPI-DITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~I-dl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
+...+.+++..+|+|..|++.++.. ++++ -+..+++..|-+|+.+++|.+|+..|...+-
T Consensus 156 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~---------~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~ 216 (359)
T 3ieg_A 156 LRELRAECFIKEGEPRKAISDLKAASKLKS---------DNTEAFYKISTLYYQLGDHELSLSEVRECLK 216 (359)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTCS---------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhCC---------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 4567788899999999999988763 3332 3457889999999999999999999998874
No 114
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=83.64 E-value=1.2 Score=39.90 Aligned_cols=62 Identities=13% Similarity=0.121 Sum_probs=44.5
Q ss_pred HHHHHHHHhhcccHHHHhhhccCcccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQPIDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
...+.+++...|+|..|++.++..--. ...+-+..+++..|.+|+.++++.+|+..|...+.
T Consensus 108 ~~~la~~~~~~g~~~~A~~~~~~~~~~------~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~ 169 (252)
T 2ho1_A 108 LNNYGGFLYEQKRYEEAYQRLLEASQD------TLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLR 169 (252)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHTTC------TTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHhC------ccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 345566778889999998887653220 12233456778889999999999999999888764
No 115
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=83.49 E-value=0.57 Score=46.38 Aligned_cols=59 Identities=14% Similarity=0.164 Sum_probs=47.1
Q ss_pred HHHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKIL 306 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL 306 (526)
+...|..++..+|+|..|++.++. |++++ -+...+|..|-+|+.+++|.+|+..|..++
T Consensus 232 ~~~nla~~~~~~g~~~~A~~~~~~al~~~p---------~~~~a~~~lg~a~~~~g~~~~A~~~l~~al 291 (338)
T 2if4_A 232 CHLNIAACLIKLKRYDEAIGHCNIVLTEEE---------KNPKALFRRGKAKAELGQMDSARDDFRKAQ 291 (338)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHHHCT---------TCHHHHHHHHHHHHTTTCHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCC---------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 345566778889999999998765 33333 356789999999999999999999998866
No 116
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=83.06 E-value=1.1 Score=41.23 Aligned_cols=60 Identities=12% Similarity=0.129 Sum_probs=43.3
Q ss_pred HHHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
+...+.+++..+|+|..|++.++. +++++ -+..+++..|-+|+.+++|.+|++.|...+.
T Consensus 208 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~---------~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 268 (327)
T 3cv0_A 208 LWNKLGATLANGNRPQEALDAYNRALDINP---------GYVRVMYNMAVSYSNMSQYDLAAKQLVRAIY 268 (327)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCT---------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHcCC---------CCHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 345666777788888888887765 33322 2345677888888888888888888888765
No 117
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=83.03 E-value=1.7 Score=41.93 Aligned_cols=55 Identities=16% Similarity=0.094 Sum_probs=46.0
Q ss_pred HHHHHHHHhhcccHHHHhhhccCcccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQPIDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
.+.+-.+++-.|+|..|++.++. +-+...++..|.+|+.++|+.+|++.|...+-
T Consensus 104 ~~~la~~~~~~g~~~~Al~~l~~-------------~~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~ 158 (291)
T 3mkr_A 104 LLMAASIYFYDQNPDAALRTLHQ-------------GDSLECMAMTVQILLKLDRLDLARKELKKMQD 158 (291)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHTT-------------CCSHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHhC-------------CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 35556788899999999999886 34566788899999999999999999998764
No 118
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=82.95 E-value=1.1 Score=42.43 Aligned_cols=59 Identities=8% Similarity=-0.057 Sum_probs=48.1
Q ss_pred HHHHHHHHhhcccHHHHhhhccCc-ccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQPI-DITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~I-dl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
...|.+++..+|+|..|++.++.. ++++ -+..+++..|-+|+.+++|.+|++.|...+.
T Consensus 101 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~---------~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~ 160 (368)
T 1fch_A 101 WQYLGTTQAENEQELLAISALRRCLELKP---------DNQTALMALAVSFTNESLQRQACEILRDWLR 160 (368)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCT---------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCcCHHHHHHHHHHHHhcCC---------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 446677889999999999988763 3333 2456889999999999999999999999875
No 119
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=82.77 E-value=1.5 Score=41.83 Aligned_cols=59 Identities=10% Similarity=0.057 Sum_probs=46.9
Q ss_pred HHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
+..+..++...|+|..|++.++. |.+++ -+..+++..|-+|+.+++|.+|+..|...+.
T Consensus 7 ~~~~g~~~~~~g~~~~A~~~~~~al~~~p---------~~~~~~~~la~~~~~~~~~~~A~~~~~~al~ 66 (281)
T 2c2l_A 7 LKEQGNRLFVGRKYPEAAACYGRAITRNP---------LVAVYYTNRALCYLKMQQPEQALADCRRALE 66 (281)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCS---------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCC---------ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 44556677889999999998875 33333 2457889999999999999999999988764
No 120
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=82.73 E-value=0.99 Score=41.08 Aligned_cols=62 Identities=11% Similarity=0.113 Sum_probs=47.0
Q ss_pred HHHHHHHHhhcccHHHHhhhccCcc-cCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQPID-ITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~Id-l~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
+..+.+.....|||..|++.++.+- ..+.+.+ .....|..|.+|+.+++|.+|+..|..++-
T Consensus 7 ~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~------~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~ 69 (225)
T 2yhc_A 7 IYATAQQKLQDGNWRQAITQLEALDNRYPFGPY------SQQVQLDLIYAYYKNADLPLAQAAIDRFIR 69 (225)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTT------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChH------HHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 3445566777899999999999743 3332211 124688999999999999999999999774
No 121
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=82.62 E-value=1.5 Score=44.34 Aligned_cols=107 Identities=12% Similarity=0.140 Sum_probs=63.9
Q ss_pred HHHHHHHHHhhcccHHHHhhhccC-cccCCcc-------cccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHHH-
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQP-IDITQQG-------VYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLYI- 309 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~-------l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~yi- 309 (526)
++..+-..+...|||..|++.++. |++.+.. -.....+-...+++..|-||+.+++|.+|+..+..+|..-
T Consensus 225 ~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p 304 (370)
T 1ihg_A 225 DLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDP 304 (370)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCc
Confidence 355666788889999999987765 2221100 0001334567889999999999999999999999988520
Q ss_pred HhhcccccCChhHHHHhhHHHHHHHHHHHHHhhCCCC
Q 009775 310 YKTKQYHQKSPQYEQILKKNEQMYALLAICLSLCPQV 346 (526)
Q Consensus 310 ~r~k~~~~ks~q~d~i~K~~eqMyaLlAIc~~l~P~~ 346 (526)
...+.+.....-+- -.++.++....+--++.+.|..
T Consensus 305 ~~~~a~~~lg~~~~-~~g~~~eA~~~l~~Al~l~P~~ 340 (370)
T 1ihg_A 305 SNTKALYRRAQGWQ-GLKEYDQALADLKKAQEIAPED 340 (370)
T ss_dssp TCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTC
T ss_pred hhHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhCCCC
Confidence 01111111110111 1233455555555677788853
No 122
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=82.45 E-value=1 Score=44.65 Aligned_cols=60 Identities=15% Similarity=0.186 Sum_probs=48.9
Q ss_pred HHHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
+..++.+++..+|+|..|++.++. +++++ -+...++..|-+|+.+++|.+|+..|..++.
T Consensus 41 ~~~~la~~~~~~g~~~~A~~~~~~al~~~p---------~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~ 101 (514)
T 2gw1_A 41 FYSNLSACYVSVGDLKKVVEMSTKALELKP---------DYSKVLLRRASANEGLGKFADAMFDLSVLSL 101 (514)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCS---------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHhhHHHHHHHHHHHhccCh---------HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 456677888999999999999876 33333 3457889999999999999999999998763
No 123
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=82.44 E-value=1.5 Score=39.86 Aligned_cols=59 Identities=15% Similarity=0.048 Sum_probs=46.9
Q ss_pred HHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHH-----------hhHHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLML-----------RRYVDAIREFNKILL 307 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMl-----------rRY~DAir~F~~iL~ 307 (526)
...|-+++..+|++..|++.++. +++++ -+...++..|-+|+.+ +++.+|+..|...+-
T Consensus 42 ~~~lg~~~~~~g~~~~A~~~~~~al~~~P---------~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~ 112 (217)
T 2pl2_A 42 LYWLARTQLKLGLVNPALENGKTLVARTP---------RYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAER 112 (217)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCT---------TCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCC---------CcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHH
Confidence 34555677889999999998876 34443 2456788999999999 999999999998874
No 124
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=82.27 E-value=0.75 Score=43.61 Aligned_cols=69 Identities=12% Similarity=0.097 Sum_probs=49.7
Q ss_pred HHHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLYI 309 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~yi 309 (526)
++.++-.++..+|+|..|++.++. +++.+..- ..+...+.+++..|.+|+.+++|.+|+..|...+-..
T Consensus 157 ~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~--~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~ 226 (293)
T 2qfc_A 157 IENAIANIYAENGYLKKGIDLFEQILKQLEALH--DNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEIS 226 (293)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSC--CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcC--ccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 455666788889999999988765 32211100 0111224789999999999999999999999988653
No 125
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=81.32 E-value=2.2 Score=43.69 Aligned_cols=102 Identities=12% Similarity=-0.042 Sum_probs=67.7
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHhccCCcccccCCccCCCCchhhHhhhHHHHHHHHHHHhhcccHHHHhhhccCcccCCc
Q 009775 189 GVLNFLQALVEKSMIIQILEREKEGLEQFTATDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLQPIDITQQ 268 (526)
Q Consensus 189 ~VLn~L~sLv~kS~I~e~L~~~~~g~~~~~~a~~~~~~g~~~l~~mLGYFSlIGLlRvh~LLGDY~~ALk~L~~Idl~~k 268 (526)
....+...+....+..+.++..+..... ... -.+...|.++++..|++..|+++++.+.-...
T Consensus 119 ~~~~l~~~~~~~g~~~~A~~~~~~~~~~----------~~~-------~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~ 181 (597)
T 2xpi_A 119 DAFWLAQVYCCTGDYARAKCLLTKEDLY----------NRS-------SACRYLAAFCLVKLYDWQGALNLLGETNPFRK 181 (597)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHTCGG----------GTC-------HHHHHHHHHHHHHTTCHHHHHHHHCSSCTTC-
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHHhcc----------ccc-------hhHHHHHHHHHHHHhhHHHHHHHHhccCCccc
Confidence 3345556666666666666555432210 111 13667888999999999999999996433220
Q ss_pred --------ccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 269 --------GVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 269 --------~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
.-+..-.+-.+.+++..|-+|.-.+++.+|++.|...+-
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~ 228 (597)
T 2xpi_A 182 DEKNANKLLMQDGGIKLEASMCYLRGQVYTNLSNFDRAKECYKEALM 228 (597)
T ss_dssp ---------CCCSSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cccccccccccccccchhHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 001111123578899999999999999999999999874
No 126
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=81.25 E-value=1.5 Score=41.59 Aligned_cols=59 Identities=15% Similarity=0.276 Sum_probs=34.8
Q ss_pred HHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
..+|.+++...|+|..|++.++. +++++. +..+++..|.+|+.+++|.+|+..|...+-
T Consensus 220 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~---------~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 279 (368)
T 1fch_A 220 QCGLGVLFNLSGEYDKAVDCFTAALSVRPN---------DYLLWNKLGATLANGNQSEEAVAAYRRALE 279 (368)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCcC---------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 34455666667777777766654 222221 234566667777777777777777666653
No 127
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=81.23 E-value=1.8 Score=37.22 Aligned_cols=60 Identities=10% Similarity=0.037 Sum_probs=47.2
Q ss_pred HHHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHH-HHHHhhH--HHHHHHHHHHHH
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFA-NLMLRRY--VDAIREFNKILL 307 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFa-YlMlrRY--~DAir~F~~iL~ 307 (526)
+...+.+++...|||..|++.++. +.+++. +...++..|-+ |+..++| .+|+..|...+.
T Consensus 46 ~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~---------~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~ 109 (177)
T 2e2e_A 46 QWALLGEYYLWQNDYSNSLLAYRQALQLRGE---------NAELYAALATVLYYQASQHMTAQTRAMIDKALA 109 (177)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHCS---------CHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC---------CHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHH
Confidence 345666788899999999998876 333332 35577889999 8899999 999999998875
No 128
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=80.69 E-value=2.3 Score=40.79 Aligned_cols=66 Identities=8% Similarity=-0.037 Sum_probs=46.6
Q ss_pred HHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLYI 309 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~yi 309 (526)
+..|-.++.. |||..|++.++. +++.+.. ..+.-...++..+|-+|..+++|.+|+..|...+-..
T Consensus 119 ~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~---~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 185 (307)
T 2ifu_A 119 LDRAGKLMEP-LDLSKAVHLYQQAAAVFENE---ERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMY 185 (307)
T ss_dssp HHHHHHHHTT-TCHHHHHHHHHHHHHHHHHT---TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHc-CCHHHHHHHHHHHHHHHHhC---CChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 3445556666 999999988765 4443210 0112235678889999999999999999999988643
No 129
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=80.59 E-value=1.3 Score=42.27 Aligned_cols=66 Identities=15% Similarity=0.125 Sum_probs=46.3
Q ss_pred HHHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKIL 306 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL 306 (526)
++..+-.+++.+|+|..|++.++. +++.+..-..+ -..-..++..|.||+.+++|.+|+..|...+
T Consensus 160 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~--~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 226 (292)
T 1qqe_A 160 CFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQ--WSLKDYFLKKGLCQLAATDAVAAARTLQEGQ 226 (292)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTG--GGHHHHHHHHHHHHHHTTCHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCccc--HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 355667889999999999998876 33443221100 0011256788999999999999999988754
No 130
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=80.55 E-value=7.4 Score=40.10 Aligned_cols=143 Identities=11% Similarity=0.088 Sum_probs=84.0
Q ss_pred HHHHHHHHHHhhc---------ccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHH--------hhHHHHH
Q 009775 238 FSMVGLLRVHCLL---------GDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLML--------RRYVDAI 299 (526)
Q Consensus 238 FSlIGLlRvh~LL---------GDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMl--------rRY~DAi 299 (526)
-++..|..++..+ |+|..|++.++. +++++. +...++..|.+|+.+ ++|.+|+
T Consensus 171 ~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~---------~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~ 241 (474)
T 4abn_A 171 VSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVL---------DGRSWYILGNAYLSLYFNTGQNPKISQQAL 241 (474)
T ss_dssp HHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCC---------CHHHHHHHHHHHHHHHHhhccccchHHHHH
Confidence 3455667788889 999999998876 444432 346789999999999 9999999
Q ss_pred HHHHHHHHHHHhhccc----ccCChhHHHHhhHHHHHHHHHHHHHhhCCCCcchhhHHHHHH--HHHhhHHHHHhhccCh
Q 009775 300 REFNKILLYIYKTKQY----HQKSPQYEQILKKNEQMYALLAICLSLCPQVKHVEETVNSQL--REKYGEKMIRMQRYDD 373 (526)
Q Consensus 300 r~F~~iL~yi~r~k~~----~~ks~q~d~i~K~~eqMyaLlAIc~~l~P~~~~lDe~I~~~l--rEky~dk~~kmq~Gd~ 373 (526)
..|...+-.--..... .....-+ .-..+.++....+.-++.+.|.....-..+...+ ..++.+-+...++-..
T Consensus 242 ~~~~~al~~~p~~~~~~~~~~~lg~~~-~~~g~~~~A~~~~~~al~l~p~~~~a~~~l~~~~~~lg~~~eAi~~~~~~~~ 320 (474)
T 4abn_A 242 SAYAQAEKVDRKASSNPDLHLNRATLH-KYEESYGEALEGFSQAAALDPAWPEPQQREQQLLEFLSRLTSLLESKGKTKP 320 (474)
T ss_dssp HHHHHHHHHCGGGGGCHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHTTTCCH
T ss_pred HHHHHHHHhCCCcccCHHHHHHHHHHH-HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhccccC
Confidence 9999988631100000 0000001 1123445555556667778885411111111111 2345555555556555
Q ss_pred hhhcchHhhhhhcCCCcccC
Q 009775 374 EAFSIYDELFSYACPKFITP 393 (526)
Q Consensus 374 e~f~~~~elF~~acPKFIsp 393 (526)
..+ .++...-.++-+.|
T Consensus 321 ~~l---~~~~~~l~~~~~g~ 337 (474)
T 4abn_A 321 KKL---QSMLGSLRPAHLGP 337 (474)
T ss_dssp HHH---HHHHHTCCSGGGCC
T ss_pred ccH---HHHHHhchhccCCc
Confidence 566 66666666554444
No 131
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=80.15 E-value=1.6 Score=42.77 Aligned_cols=28 Identities=21% Similarity=0.271 Sum_probs=15.5
Q ss_pred ehHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 009775 279 ITTIYHYGFANLMLRRYVDAIREFNKIL 306 (526)
Q Consensus 279 Vs~~YyvGFaYlMlrRY~DAir~F~~iL 306 (526)
...++..|-+|+.+++|.+|++.|...+
T Consensus 94 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~ 121 (450)
T 2y4t_A 94 TAARLQRGHLLLKQGKLDEAEDDFKKVL 121 (450)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3445555555555555555555555544
No 132
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=80.01 E-value=1.6 Score=38.49 Aligned_cols=59 Identities=12% Similarity=0.066 Sum_probs=47.2
Q ss_pred HHHHHHHHhhcccHHHHhhhccCc-ccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQPI-DITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~I-dl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
...+.+++..+|||..|++.++.. ++++. +..+++..|-+|+.+++|.+|+..|..++.
T Consensus 94 ~~~la~~~~~~~~~~~A~~~~~~~~~~~~~---------~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~ 153 (243)
T 2q7f_A 94 YYGAGNVYVVKEMYKEAKDMFEKALRAGME---------NGDLFYMLGTVLVKLEQPKLALPYLQRAVE 153 (243)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHTCC---------SHHHHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHhCCC---------CHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 456678888999999999988763 33332 245688899999999999999999998774
No 133
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=79.87 E-value=1.3 Score=36.29 Aligned_cols=67 Identities=13% Similarity=0.055 Sum_probs=48.1
Q ss_pred HHHHHHHHhhcccHHHHhhhccCc-ccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQPI-DITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLY 308 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~I-dl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~y 308 (526)
+..|-+.....|||..|++.++.. +.....- ....-...++++.|+||.-++++..|+..+...|..
T Consensus 8 c~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~--~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l 75 (104)
T 2v5f_A 8 CFELGKVAYTEADYYHTELWMEQALRQLDEGE--ISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLEL 75 (104)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTC--CCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccchHHHHHHHHHHHHhhhccC--CCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhc
Confidence 345667788899999999887652 2211000 012344577899999999999999999999988754
No 134
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=79.73 E-value=2.2 Score=38.91 Aligned_cols=66 Identities=15% Similarity=0.236 Sum_probs=47.2
Q ss_pred HHHHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 009775 238 FSMVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLY 308 (526)
Q Consensus 238 FSlIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~y 308 (526)
.++.-.-+.+...|||..|++.++. +++++. .+.....+++..|.+|+.+++|.+|+..|...+..
T Consensus 6 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-----~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 72 (338)
T 3ro2_A 6 LELALEGERLCKSGDCRAGVSFFEAAVQVGTE-----DLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTL 72 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-----CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhhCcc-----cHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 3455566778888999888888776 333332 23334567888888888888888888888887754
No 135
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=79.34 E-value=3.1 Score=40.67 Aligned_cols=77 Identities=9% Similarity=-0.068 Sum_probs=57.1
Q ss_pred hHhhhHHHHHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q 009775 232 LKVLGYFSMVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLYIY 310 (526)
Q Consensus 232 ~~mLGYFSlIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~yi~ 310 (526)
-.++.|+....+-..+...|||..|++.++. +++.+.. ..+.-...+++.+|.+|..+++|..|+..|...+-...
T Consensus 96 ~~~l~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~---~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~ 172 (378)
T 3q15_A 96 TGLLKYYSLFFRGMYEFDQKEYVEAIGYYREAEKELPFV---SDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQ 172 (378)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGC---CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhhC---CChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH
Confidence 3356666666667788899999999988765 3332211 12345667899999999999999999999999887544
Q ss_pred h
Q 009775 311 K 311 (526)
Q Consensus 311 r 311 (526)
+
T Consensus 173 ~ 173 (378)
T 3q15_A 173 N 173 (378)
T ss_dssp T
T ss_pred h
Confidence 3
No 136
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=79.23 E-value=1.8 Score=42.43 Aligned_cols=58 Identities=14% Similarity=0.166 Sum_probs=41.7
Q ss_pred HHHHHHHHHhhcccHHHHhhhccCc-ccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHH
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQPI-DITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKI 305 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~I-dl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~i 305 (526)
++..+.+.+...|+|..|++.++.+ ++++. +..+++..|-+|+.+++|.+|+..|..+
T Consensus 28 ~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~---------~~~~~~~l~~~~~~~g~~~~A~~~~~~a 86 (450)
T 2y4t_A 28 KHLELGKKLLAAGQLADALSQFHAAVDGDPD---------NYIAYYRRATVFLAMGKSKAALPDLTKV 86 (450)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhCCc---------cHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 4555667777788888888887753 33322 3667788888888888888888888764
No 137
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=79.05 E-value=1.3 Score=40.51 Aligned_cols=69 Identities=14% Similarity=0.054 Sum_probs=51.8
Q ss_pred HHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHh
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLYIYK 311 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~yi~r 311 (526)
+..+.+++...|+|..|++.++. +++.++. ..+...+.+++..|.+|+.+++|.+|+..|...+-...+
T Consensus 46 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~---~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 115 (338)
T 3ro2_A 46 YSQLGNAYFYLHDYAKALEYHHHDLTLARTI---GDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRE 115 (338)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH---TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHhhcc---cccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 45667788899999999998765 2221110 124455778899999999999999999999998875443
No 138
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=78.52 E-value=1.9 Score=39.69 Aligned_cols=60 Identities=15% Similarity=0.123 Sum_probs=47.2
Q ss_pred HHHHHHHHHhhcccHHHHhhhccCc-ccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQPI-DITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~I-dl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
+...+.+++..+|++..|++.++.. ++++ -+..+++..|.+|..+++|.+|+..|...+.
T Consensus 174 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~~---------~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~ 234 (327)
T 3cv0_A 174 LHASLGVLYNLSNNYDSAAANLRRAVELRP---------DDAQLWNKLGATLANGNRPQEALDAYNRALD 234 (327)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCT---------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCC---------CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4566778888999999999988763 2332 2346788999999999999999999988764
No 139
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=78.39 E-value=7 Score=40.68 Aligned_cols=60 Identities=15% Similarity=0.144 Sum_probs=46.6
Q ss_pred HHHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
+...|..++...|+|..|++.++. +++++. +...++..|-+|+.+++|.+|+..|...+.
T Consensus 25 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~---------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 85 (568)
T 2vsy_A 25 AWLMLADAELGMGDTTAGEMAVQRGLALHPG---------HPEAVARLGRVRWTQQRHAEAAVLLQQASD 85 (568)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHTTSTT---------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---------CHHHHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 345566677788999999998876 344432 356788899999999999999999998775
No 140
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=77.68 E-value=1.8 Score=41.97 Aligned_cols=67 Identities=18% Similarity=0.201 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 009775 237 YFSMVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLY 308 (526)
Q Consensus 237 YFSlIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~y 308 (526)
...+..+-+.+...|||..|++.++. +++++. .+.....+++..|.+|+.+++|.+|+..|...+-.
T Consensus 48 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-----~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 115 (411)
T 4a1s_A 48 CLELALEGERLCNAGDCRAGVAFFQAAIQAGTE-----DLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTL 115 (411)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-----CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccc-----ChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 44556777889999999999998876 344332 12223357889999999999999999999888764
No 141
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=77.38 E-value=12 Score=38.45 Aligned_cols=58 Identities=12% Similarity=0.032 Sum_probs=46.7
Q ss_pred HHHHHHHhhcccH-HHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 241 VGLLRVHCLLGDY-HTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 241 IGLlRvh~LLGDY-~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
..+-+++..+||| ..|++.++. +++++ -+...++..|.+|+.+++|.+|+..|...|-
T Consensus 106 ~~lg~~~~~~g~~~~~A~~~~~~al~~~p---------~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~ 165 (474)
T 4abn_A 106 MLKGKALNVTPDYSPEAEVLLSKAVKLEP---------ELVEAWNQLGEVYWKKGDVTSAHTCFSGALT 165 (474)
T ss_dssp HHHHHHHTSSSSCCHHHHHHHHHHHHHCT---------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHhccccHHHHHHHHHHHHhhCC---------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 3455778889999 999998876 34443 2456889999999999999999999998763
No 142
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=77.35 E-value=2.1 Score=37.21 Aligned_cols=68 Identities=10% Similarity=0.010 Sum_probs=44.5
Q ss_pred HHHHHHHHHhhcccHHHHhhhccCcc-cCCcc----------------------ccc---ccccceehHHHHHHHHHHHH
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQPID-ITQQG----------------------VYT---SVIGSHITTIYHYGFANLML 292 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~Id-l~~k~----------------------l~~---~V~~c~Vs~~YyvGFaYlMl 292 (526)
+..+|.+++...|++..|++.++.+- +++.. .|. ...+-+...++..|-+|+.+
T Consensus 42 a~~~la~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~ 121 (176)
T 2r5s_A 42 VKLAKADCLLETKQFELAQELLATIPLEYQDNSYKSLIAKLELHQQAAESPELKRLEQELAANPDNFELACELAVQYNQV 121 (176)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTTCCGGGCCHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHhhhccCChHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 35677788889999999999988752 22100 000 01233566777777777777
Q ss_pred hhHHHHHHHHHHHH
Q 009775 293 RRYVDAIREFNKIL 306 (526)
Q Consensus 293 rRY~DAir~F~~iL 306 (526)
++|.+|+..|..++
T Consensus 122 g~~~~A~~~~~~~l 135 (176)
T 2r5s_A 122 GRDEEALELLWNIL 135 (176)
T ss_dssp TCHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHH
Confidence 77777777777655
No 143
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=77.25 E-value=1.4 Score=45.07 Aligned_cols=58 Identities=14% Similarity=0.030 Sum_probs=41.1
Q ss_pred HHHHHHHhhccc-HHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 241 VGLLRVHCLLGD-YHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 241 IGLlRvh~LLGD-Y~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
..+-.++..+|+ |..|++.++. |.++++ +...+++.|.+|..+++|.+|+..|..+|-
T Consensus 135 ~~~g~~l~~~g~d~~eAl~~~~~al~l~P~---------~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ 194 (382)
T 2h6f_A 135 HFRRVLLKSLQKDLHEEMNYITAIIEEQPK---------NYQVWHHRRVLVEWLRDPSQELEFIADILN 194 (382)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHHHTCCTTHHHHHHHHHH
T ss_pred HHHHHHHHHcccCHHHHHHHHHHHHHHCCC---------CHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 344456667884 9999888776 444443 455678888888888888888888887764
No 144
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=77.16 E-value=4.9 Score=39.68 Aligned_cols=61 Identities=3% Similarity=-0.030 Sum_probs=46.0
Q ss_pred HHHHHHHHHhhcccHHHHhhhccCc-ccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQPI-DITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLY 308 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~I-dl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~y 308 (526)
+...+.+++..+|+|..|++.++.. +++ +-+..+++..|.+|+.+++|.+|++.|..++-.
T Consensus 340 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~---------~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 401 (514)
T 2gw1_A 340 PYIQLACLAYRENKFDDCETLFSEAKRKF---------PEAPEVPNFFAEILTDKNDFDKALKQYDLAIEL 401 (514)
T ss_dssp HHHHHHHHTTTTTCHHHHHHHHHHHHHHS---------TTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHc---------ccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 4456667778888888888877663 222 224567889999999999999999999988754
No 145
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=76.56 E-value=11 Score=37.70 Aligned_cols=61 Identities=7% Similarity=-0.030 Sum_probs=42.6
Q ss_pred HHHHHHHHHhhcccHHHHhhhccCc-ccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQPI-DITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLY 308 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~I-dl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~y 308 (526)
+...+..++..+|+|..|++.++.. +++ +-+..+++..|-+|+.+++|.+|+..|...+..
T Consensus 346 ~~~~la~~~~~~g~~~~A~~~~~~~~~~~---------~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 407 (537)
T 3fp2_A 346 PYIQLACLLYKQGKFTESEAFFNETKLKF---------PTLPEVPTFFAEILTDRGDFDTAIKQYDIAKRL 407 (537)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC---------TTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhC---------CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHc
Confidence 3455666777778888887777652 222 223456778888888888888888888887754
No 146
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=76.15 E-value=2.2 Score=38.50 Aligned_cols=68 Identities=13% Similarity=0.101 Sum_probs=44.6
Q ss_pred HHHHHHHHhhcccHHHHhhhccC-cccCCcc---ccc----ccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQP-IDITQQG---VYT----SVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~---l~~----~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
++.....+.-.|||..|++.++. |++++.. .++ +..+...++.+..|.+|+.+++|.+|+..|...|-
T Consensus 7 ~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 82 (208)
T 3urz_A 7 MLQKVSAAIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQ 82 (208)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 34455666788999999998876 3444321 010 00011112233399999999999999999999875
No 147
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=75.25 E-value=3 Score=39.75 Aligned_cols=69 Identities=12% Similarity=-0.019 Sum_probs=47.7
Q ss_pred HHHHHHHHHhhcccHHHHhhhccCccc-CCccc----------------------cc---ccccceehHHHHHHHHHHHH
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQPIDI-TQQGV----------------------YT---SVIGSHITTIYHYGFANLML 292 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~Idl-~~k~l----------------------~~---~V~~c~Vs~~YyvGFaYlMl 292 (526)
+..+|.+++...|++..|++.++.+-- ++... |. ...+-+....+..|-+|+.+
T Consensus 153 a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~ 232 (287)
T 3qou_A 153 IGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQV 232 (287)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHc
Confidence 567888999999999999999998632 22110 10 11233566777777777777
Q ss_pred hhHHHHHHHHHHHHH
Q 009775 293 RRYVDAIREFNKILL 307 (526)
Q Consensus 293 rRY~DAir~F~~iL~ 307 (526)
+||.+|+..|..+|-
T Consensus 233 g~~~~A~~~l~~~l~ 247 (287)
T 3qou_A 233 GRNEEALELLFGHLR 247 (287)
T ss_dssp TCHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHh
Confidence 777777777777663
No 148
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=75.23 E-value=5.4 Score=40.70 Aligned_cols=57 Identities=21% Similarity=0.244 Sum_probs=47.2
Q ss_pred HHHHHHHHHHhhcccHHHHhhhccCcccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHH
Q 009775 238 FSMVGLLRVHCLLGDYHTGLKCLQPIDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFN 303 (526)
Q Consensus 238 FSlIGLlRvh~LLGDY~~ALk~L~~Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~ 303 (526)
++...|.++++..|++..|+++++..-. .+.++.+.+..|-+|..+++|.+|++.|.
T Consensus 118 ~~~~~l~~~~~~~g~~~~A~~~~~~~~~---------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~ 174 (597)
T 2xpi_A 118 NDAFWLAQVYCCTGDYARAKCLLTKEDL---------YNRSSACRYLAAFCLVKLYDWQGALNLLG 174 (597)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHTCG---------GGTCHHHHHHHHHHHHHTTCHHHHHHHHC
T ss_pred hHHHHHHHHHHHcCcHHHHHHHHHHHhc---------cccchhHHHHHHHHHHHHhhHHHHHHHHh
Confidence 4556789999999999999999875421 13446688999999999999999999998
No 149
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=75.00 E-value=3 Score=43.51 Aligned_cols=59 Identities=15% Similarity=0.199 Sum_probs=47.0
Q ss_pred HHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
+..+..++..+|+|..|++.++. +++++ -+...++..|-+|+.+++|.+|++.|...+.
T Consensus 43 ~~~lg~~~~~~g~~~~A~~~~~~al~l~p---------~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~ 102 (477)
T 1wao_1 43 YGNRSLAYLRTECYGYALGDATRAIELDK---------KYIKGYYRRAASNMALGKFRAALRDYETVVK 102 (477)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHSCT---------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCC---------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 34555677889999999998765 34433 3456789999999999999999999998875
No 150
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=74.68 E-value=3 Score=39.71 Aligned_cols=65 Identities=15% Similarity=0.229 Sum_probs=45.1
Q ss_pred HHHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLY 308 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~y 308 (526)
++.-+-..+...|||..|++.++. +++++. .+.....+++..|.+|+.+++|.+|+..|...+..
T Consensus 11 ~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-----~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 76 (406)
T 3sf4_A 11 ELALEGERLCKSGDCRAGVSFFEAAVQVGTE-----DLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTL 76 (406)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-----CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhcCcc-----cHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 344555677788999999888765 333332 23334567888888888888888888888876654
No 151
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=74.21 E-value=1.6 Score=42.22 Aligned_cols=69 Identities=16% Similarity=0.210 Sum_probs=50.3
Q ss_pred HHHHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 009775 238 FSMVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLYI 309 (526)
Q Consensus 238 FSlIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~yi 309 (526)
.++..+.+++..+|||..|++.++. +++.++. ..+.....+++..|-+|+.+++|.+|+..|...+...
T Consensus 264 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~---~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 333 (411)
T 4a1s_A 264 RANSNLGNSHIFLGQFEDAAEHYKRTLALAVEL---GEREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIA 333 (411)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHT---TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 3566778888899999999888865 3332211 1223446778889999999999999999999887653
No 152
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=74.13 E-value=4.1 Score=42.44 Aligned_cols=59 Identities=17% Similarity=0.045 Sum_probs=48.0
Q ss_pred HHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
...|-+++..+|+|..|++.++. +++++. +...++..|-+|+.+++|.+|+..|...+-
T Consensus 60 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~---------~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 119 (568)
T 2vsy_A 60 VARLGRVRWTQQRHAEAAVLLQQASDAAPE---------HPGIALWLGHALEDAGQAEAAAAAYTRAHQ 119 (568)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhcCCC---------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 45566788899999999998876 344432 356789999999999999999999999875
No 153
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=73.42 E-value=1.5 Score=42.12 Aligned_cols=66 Identities=11% Similarity=-0.007 Sum_probs=48.0
Q ss_pred HHHHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 009775 238 FSMVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKIL 306 (526)
Q Consensus 238 FSlIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL 306 (526)
-++..|-+++..+|+|..|++.++. +++.++.-. .......+...|.+|+-+++|.+|++.|...+
T Consensus 156 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~---~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al 222 (307)
T 2ifu_A 156 ELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMEN---YPTCYKKCIAQVLVQLHRADYVAAQKCVRESY 222 (307)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCC---hhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 3456677889999999999998876 334322110 11122367788999999999999999999987
No 154
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=73.24 E-value=5 Score=38.13 Aligned_cols=70 Identities=13% Similarity=0.160 Sum_probs=51.5
Q ss_pred HHHHHHHHHhhccc--------------------HHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHH
Q 009775 239 SMVGLLRVHCLLGD--------------------YHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVD 297 (526)
Q Consensus 239 SlIGLlRvh~LLGD--------------------Y~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~D 297 (526)
++..+..++..+|+ |..|++.++. +++.++. ..+.-...+++..|.+|+.+++|.+
T Consensus 129 ~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~---~~~~~~~~~~~~la~~~~~~g~~~~ 205 (406)
T 3sf4_A 129 ALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDFYEENLSLVTAL---GDRAAQGRAFGNLGNTHYLLGNFRD 205 (406)
T ss_dssp HHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHT---TCHHHHHHHHHHHHHHHHHHTBHHH
T ss_pred HHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhc---cCcHHHHHHHHHHHHHHHHccCHHH
Confidence 45567788999999 9999887765 3332211 1233455688899999999999999
Q ss_pred HHHHHHHHHHHHHh
Q 009775 298 AIREFNKILLYIYK 311 (526)
Q Consensus 298 Air~F~~iL~yi~r 311 (526)
|+..|...+....+
T Consensus 206 A~~~~~~al~~~~~ 219 (406)
T 3sf4_A 206 AVIAHEQRLLIAKE 219 (406)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 99999998865443
No 155
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=72.66 E-value=1.5 Score=44.76 Aligned_cols=56 Identities=9% Similarity=0.108 Sum_probs=45.4
Q ss_pred HHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 243 LLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 243 LlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
+-.++..+|+|..|++.++. |+++++ +...+++.|.++..++||.+|+..|...|-
T Consensus 172 ~g~~~~~~g~~~eAl~~~~kal~ldP~---------~~~a~~~lg~~~~~~g~~~eAl~~~~~al~ 228 (382)
T 2h6f_A 172 RRVLVEWLRDPSQELEFIADILNQDAK---------NYHAWQHRQWVIQEFKLWDNELQYVDQLLK 228 (382)
T ss_dssp HHHHHHHHTCCTTHHHHHHHHHHHCTT---------CHHHHHHHHHHHHHHTCCTTHHHHHHHHHH
T ss_pred HHHHHHHccCHHHHHHHHHHHHHhCcc---------CHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Confidence 33456678999999998876 455543 456789999999999999999999999874
No 156
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=72.50 E-value=2.6 Score=45.89 Aligned_cols=59 Identities=19% Similarity=0.200 Sum_probs=48.2
Q ss_pred HHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
...+.+++..+|+|..|++.++. +++++ -+...+|..|.+|+.+++|.+|+..|...|-
T Consensus 436 ~~~~a~~~~~~g~~~~A~~~~~~al~~~p---------~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~ 495 (681)
T 2pzi_A 436 PLMEVRALLDLGDVAKATRKLDDLAERVG---------WRWRLVWYRAVAELLTGDYDSATKHFTEVLD 495 (681)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHC---------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhccCc---------chHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 45567788889999999998876 33333 3456889999999999999999999999874
No 157
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=72.42 E-value=1.9 Score=36.96 Aligned_cols=53 Identities=6% Similarity=-0.030 Sum_probs=42.6
Q ss_pred HHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHH
Q 009775 242 GLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFN 303 (526)
Q Consensus 242 GLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~ 303 (526)
.|-.++..+|+|..|++.++. |++++. +..+++..|-+|+.++++.+|++.|.
T Consensus 70 ~lg~~~~~~~~~~~A~~~~~~al~~~p~---------~~~~~~~la~~~~~~~~~~~aa~~~~ 123 (150)
T 4ga2_A 70 FLGLLYELEENTDKAVECYRRSVELNPT---------QKDLVLKIAELLCKNDVTDGRAKYWV 123 (150)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHHHCSSSSHHHHHH
T ss_pred HHHHHHHHcCchHHHHHHHHHHHHhCCC---------CHHHHHHHHHHHHHcCChHHHHHHHH
Confidence 344678889999999998876 555543 45678999999999999999999874
No 158
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=72.29 E-value=4 Score=39.42 Aligned_cols=56 Identities=14% Similarity=0.055 Sum_probs=33.6
Q ss_pred HHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 009775 242 GLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKIL 306 (526)
Q Consensus 242 GLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL 306 (526)
.|.++++..|++..|++.++. +++++ -+..+++..|-+|..++++.+|+..|...+
T Consensus 242 ~l~~~~~~~g~~~~A~~~~~~al~~~p---------~~~~~~~~l~~~~~~~g~~~~A~~~~~~al 298 (388)
T 1w3b_A 242 NLACVYYEQGLIDLAIDTYRRAIELQP---------HFPDAYCNLANALKEKGSVAEAEDCYNTAL 298 (388)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTCS---------SCHHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCC---------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 445566666777777666544 22222 123456667777777777777777776655
No 159
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=70.20 E-value=4.2 Score=35.22 Aligned_cols=62 Identities=10% Similarity=-0.025 Sum_probs=47.2
Q ss_pred HHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLY 308 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~y 308 (526)
...|.+++..+|+|..|++.++. +.+++. .......+..|-+|..++++.+|+..|...|..
T Consensus 111 ~~~la~~~~~~g~~~~A~~~~~~~l~~~p~-------~~~~~a~~~l~~~~~~~g~~~~A~~~y~~al~~ 173 (176)
T 2r5s_A 111 ACELAVQYNQVGRDEEALELLWNILKVNLG-------AQDGEVKKTFMDILSALGQGNAIASKYRRQLYS 173 (176)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTCTT-------TTTTHHHHHHHHHHHHHCSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHhCcc-------cChHHHHHHHHHHHHHhCCCCcHHHHHHHHHHH
Confidence 34566778889999999999875 333321 112346788999999999999999999988764
No 160
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=69.70 E-value=3.7 Score=45.82 Aligned_cols=35 Identities=17% Similarity=0.120 Sum_probs=24.8
Q ss_pred HHHHHHHhhcccccccCCceecc--CceeEEEeCCeE
Q 009775 457 RTILMTYKHKTHAVDSDGKITSN--ADVDFYIDDNMI 491 (526)
Q Consensus 457 r~~Ll~~K~k~r~l~~~G~~~~~--sdlDF~Id~dmI 491 (526)
|..+++.|-.--|+.|=|-..++ ..+|++|-+..+
T Consensus 329 r~~i~a~r~APvQv~~lG~p~TtG~~~iDY~i~D~~~ 365 (723)
T 4gyw_A 329 RNELFALRPAPIQAMWLGYPGTSGALFMDYIITDQET 365 (723)
T ss_dssp CTHHHHTCCSSEEEECSSCSSCCCCTTCCEEEECTTT
T ss_pred cchhhhcCCCCceeeeccCCCCCCCCcCCEEEeCCCC
Confidence 45677777777888887766654 559999876543
No 161
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=69.62 E-value=3.6 Score=45.84 Aligned_cols=59 Identities=14% Similarity=0.130 Sum_probs=47.5
Q ss_pred HHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
...|-.++..+|+|..|++.++. |++++ -+...++..|-+|..+++|.+|+..|...|-
T Consensus 80 ~~nLg~~l~~~g~~~~A~~~~~kAl~l~P---------~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~ 139 (723)
T 4gyw_A 80 YSNMGNTLKEMQDVQGALQCYTRAIQINP---------AFADAHSNLASIHKDSGNIPEAIASYRTALK 139 (723)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCT---------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCC---------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 34556678889999999998865 45544 3456788999999999999999999998874
No 162
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=68.68 E-value=2.8 Score=40.52 Aligned_cols=58 Identities=12% Similarity=0.091 Sum_probs=37.7
Q ss_pred HHHHHHHHhhcccHHHHhhhccCc-ccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQPI-DITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKIL 306 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~I-dl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL 306 (526)
...|.++++..|+|..|++.++.. .++ +-++..++..|-+|..++++.+|++.|...+
T Consensus 70 ~~~lg~~~~~~g~~~~A~~~~~~al~~~---------p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al 128 (388)
T 1w3b_A 70 YSNLGNVYKERGQLQEAIEHYRHALRLK---------PDFIDGYINLAAALVAAGDMEGAVQAYVSAL 128 (388)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHC---------TTCHHHHHHHHHHHHHHSCSSHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHcC---------cchHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 344556778889998888877652 222 2234556667777777777777777776655
No 163
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=67.35 E-value=2.8 Score=39.80 Aligned_cols=65 Identities=14% Similarity=0.179 Sum_probs=46.0
Q ss_pred HHHHHHHHhh-cccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCL-LGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 240 lIGLlRvh~L-LGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
+..|-.++.- +|||..|++..+. +++.+.. ..+.-...++..+|-+|+-+++|.+|+..|..++-
T Consensus 120 ~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~---~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 186 (292)
T 1qqe_A 120 KFELGEILENDLHDYAKAIDCYELAGEWYAQD---QSVALSNKCFIKCADLKALDGQYIEASDIYSKLIK 186 (292)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT---TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhC---CChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 4456677887 5999999988765 4443210 00111134678899999999999999999999874
No 164
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=66.91 E-value=4.2 Score=33.24 Aligned_cols=54 Identities=11% Similarity=0.060 Sum_probs=38.7
Q ss_pred HHHhhccc---HHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 245 RVHCLLGD---YHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 245 Rvh~LLGD---Y~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
.+.+..|| ...|.+.++. +. .-+-+++..+..|+.++..++|.+||+.+..+|-
T Consensus 14 ~al~~~~~~~~~~~A~~~l~~AL~---------~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~ 71 (93)
T 3bee_A 14 TTLYYLHKQAMTDEVSLLLEQALQ---------LEPYNEAALSLIANDHFISFRFQEAIDTWVLLLD 71 (93)
T ss_dssp HHHHHTTTTCCCHHHHHHHHHHHH---------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHH---------HCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 33444455 4566665543 22 2345678888999999999999999999999873
No 165
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=66.79 E-value=5.1 Score=36.81 Aligned_cols=48 Identities=10% Similarity=0.100 Sum_probs=36.9
Q ss_pred ccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHh-----------hHHHHHHHHHHHHH
Q 009775 251 GDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLR-----------RYVDAIREFNKILL 307 (526)
Q Consensus 251 GDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlr-----------RY~DAir~F~~iL~ 307 (526)
+.+..|++.++. |.++++ +...+|..|-+|.+++ +|.+|+.+|...|-
T Consensus 60 ~~~~eAi~~le~AL~ldP~---------~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~ 119 (158)
T 1zu2_A 60 QMIQEAITKFEEALLIDPK---------KDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVD 119 (158)
T ss_dssp HHHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCcC---------cHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHH
Confidence 346688877766 555553 4567899999999996 89999999888774
No 166
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=65.89 E-value=4.6 Score=32.06 Aligned_cols=30 Identities=17% Similarity=0.132 Sum_probs=26.9
Q ss_pred eehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 278 HITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 278 ~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
....+|..|.+|+.+++|.+|++.|...+-
T Consensus 6 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 35 (100)
T 3ma5_A 6 DPFTRYALAQEHLKHDNASRALALFEELVE 35 (100)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 456789999999999999999999999875
No 167
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=65.17 E-value=6.5 Score=35.56 Aligned_cols=61 Identities=16% Similarity=0.268 Sum_probs=42.4
Q ss_pred HHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHH------------------hhHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLML------------------RRYVDAIR 300 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMl------------------rRY~DAir 300 (526)
...|..++..+|||..|++.++. |++++.+.. + -..+|..|.+|..+ +++.+|+.
T Consensus 44 ~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~--~----~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~ 117 (225)
T 2yhc_A 44 QLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPN--I----DYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFS 117 (225)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTT--H----HHHHHHHHHHHHHHHC--------------CCHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCc--H----HHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHH
Confidence 34455677789999999999887 344443211 1 12478899999874 67888888
Q ss_pred HHHHHH
Q 009775 301 EFNKIL 306 (526)
Q Consensus 301 ~F~~iL 306 (526)
.|..++
T Consensus 118 ~~~~~l 123 (225)
T 2yhc_A 118 DFSKLV 123 (225)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887765
No 168
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=64.73 E-value=20 Score=33.96 Aligned_cols=129 Identities=9% Similarity=-0.007 Sum_probs=66.1
Q ss_pred HHHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHH---HhhHHHHHHHHHHHHHHHHhhcc
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLM---LRRYVDAIREFNKILLYIYKTKQ 314 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlM---lrRY~DAir~F~~iL~yi~r~k~ 314 (526)
..+.+.++....|++..|+++++. +++++ ++ ...|+|.+.+- ++++.+|+++|...|..--..-.
T Consensus 136 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p---------~~--~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p~~~~ 204 (308)
T 2ond_A 136 VYIQYMKFARRAEGIKSGRMIFKKAREDAR---------TR--HHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPE 204 (308)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHTSTT---------CC--THHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCC---------CC--HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH
Confidence 345555666678999999988765 33332 22 22345777764 68999999999988753221111
Q ss_pred cccCChhHHHHhhHHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHhhHHHHHhhccChhhhcchHhhhhhcC
Q 009775 315 YHQKSPQYEQILKKNEQMYALLAICLSLCPQVKHVEETVNSQLREKYGEKMIRMQRYDDEAFSIYDELFSYAC 387 (526)
Q Consensus 315 ~~~ks~q~d~i~K~~eqMyaLlAIc~~l~P~~~~lDe~I~~~lrEky~dk~~kmq~Gd~e~f~~~~elF~~ac 387 (526)
....-.++..-.+..++.-.++--++..++ ++.+-...+...+++-. .+.|+.+.. ..++..+.
T Consensus 205 ~~~~~~~~~~~~g~~~~A~~~~~~al~~~~----l~p~~~~~l~~~~~~~~--~~~g~~~~a---~~~~~~a~ 268 (308)
T 2ond_A 205 YVLAYIDYLSHLNEDNNTRVLFERVLTSGS----LPPEKSGEIWARFLAFE--SNIGDLASI---LKVEKRRF 268 (308)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHSSS----SCGGGCHHHHHHHHHHH--HHHSCHHHH---HHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhccC----CCHHHHHHHHHHHHHHH--HHcCCHHHH---HHHHHHHH
Confidence 110001111112344555555555666532 11111122233333322 234676666 66666643
No 169
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=64.06 E-value=2.7 Score=38.53 Aligned_cols=51 Identities=16% Similarity=0.260 Sum_probs=40.4
Q ss_pred cccHHHHhhhccCcccCCccccccc-ccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 250 LGDYHTGLKCLQPIDITQQGVYTSV-IGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 250 LGDY~~ALk~L~~Idl~~k~l~~~V-~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
.+|...|+++|+.+ +... |.-+--..||.|.+|+-+++|..|.+.|..+|-
T Consensus 48 ~~~~~~gI~lLe~l-------l~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ 99 (152)
T 1pc2_A 48 NDDIRKGIVLLEEL-------LPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQ 99 (152)
T ss_dssp HHHHHHHHHHHHHH-------HHHSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-------HhcCCccchHHHHHHHHHHHHHccCHHHHHHHHHHHHh
Confidence 34999999999873 2222 334566789999999999999999999999884
No 170
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=63.91 E-value=7.2 Score=38.89 Aligned_cols=54 Identities=15% Similarity=0.354 Sum_probs=42.7
Q ss_pred HHHHHHHhhcccHHHHhhhccCcccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHH
Q 009775 241 VGLLRVHCLLGDYHTGLKCLQPIDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFN 303 (526)
Q Consensus 241 IGLlRvh~LLGDY~~ALk~L~~Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~ 303 (526)
+++.++.+-.|+|..|.++++.+.... +-++ ..|-.|..++-++||.||+..|.
T Consensus 106 LayA~~L~~~g~y~eA~~~l~~~~~~~--------p~~~-~~~~~a~l~~~~~r~~dA~~~l~ 159 (282)
T 4f3v_A 106 MGFAACEAAQGNYADAMEALEAAPVAG--------SEHL-VAWMKAVVYGAAERWTDVIDQVK 159 (282)
T ss_dssp HHHHHHHHHHTCHHHHHHHHTSSCCTT--------CHHH-HHHHHHHHHHHTTCHHHHHHHHT
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHhcC--------CchH-HHHHHHHHHHHcCCHHHHHHHHH
Confidence 446788888999999999999876532 2344 66888888888888888888885
No 171
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=62.39 E-value=5.2 Score=39.52 Aligned_cols=65 Identities=12% Similarity=0.009 Sum_probs=43.9
Q ss_pred HHHHHHhhcccHHHHhhhccCc-ccCCcccccccccceehHHHHHHHHHHHHh--hHHHHHHHHHHHHH
Q 009775 242 GLLRVHCLLGDYHTGLKCLQPI-DITQQGVYTSVIGSHITTIYHYGFANLMLR--RYVDAIREFNKILL 307 (526)
Q Consensus 242 GLlRvh~LLGDY~~ALk~L~~I-dl~~k~l~~~V~~c~Vs~~YyvGFaYlMlr--RY~DAir~F~~iL~ 307 (526)
.|..+|..+|+|..|++.++.+ ++.++. ...-..-+-.++...|.+++-++ +|.+|+.+|...|-
T Consensus 99 nla~~y~~~g~~~~A~~~~~ka~~i~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~ 166 (472)
T 4g1t_A 99 NYAWVYYHMGRLSDVQIYVDKVKHVCEKF-SSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALE 166 (472)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHS-CCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCChHHHHHHHHHHHHHhHhc-ccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHH
Confidence 4456788999999999887653 333211 11111123456778899988774 69999999998764
No 172
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=59.72 E-value=8.1 Score=35.38 Aligned_cols=56 Identities=14% Similarity=0.066 Sum_probs=39.2
Q ss_pred HHHHHHHhhcccHHHHhhhccCcccCCcccccccccceehHHHHHHHHHHH----HhhHHHHHHHHHHHH
Q 009775 241 VGLLRVHCLLGDYHTGLKCLQPIDITQQGVYTSVIGSHITTIYHYGFANLM----LRRYVDAIREFNKIL 306 (526)
Q Consensus 241 IGLlRvh~LLGDY~~ALk~L~~Idl~~k~l~~~V~~c~Vs~~YyvGFaYlM----lrRY~DAir~F~~iL 306 (526)
..|-+++...|||..|++.++..-- .-+...++.+|.+|+. .+++.+|++.|...+
T Consensus 10 ~~lg~~~~~~~~~~~A~~~~~~a~~----------~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~ 69 (273)
T 1ouv_A 10 VGLGAKSYKEKDFTQAKKYFEKACD----------LKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKAC 69 (273)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHH----------TTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHH----------CCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHH
Confidence 3344566677899999887764211 1233567888888888 888888888888765
No 173
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=59.20 E-value=29 Score=26.42 Aligned_cols=29 Identities=10% Similarity=0.206 Sum_probs=25.9
Q ss_pred ehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 279 ITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 279 Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
...++..|-+|+..++|.+|++.|...+.
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~ 32 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLIT 32 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 35678899999999999999999999875
No 174
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=57.51 E-value=13 Score=27.44 Aligned_cols=32 Identities=28% Similarity=0.371 Sum_probs=27.8
Q ss_pred cceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 276 GSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 276 ~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
+.....++..|.+|+.+++|.+|++.|...+.
T Consensus 6 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~ 37 (91)
T 1na3_A 6 GNSAEAWYNLGNAYYKQGDYDEAIEYYQKALE 37 (91)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHccCHHHHHHHHHHHHh
Confidence 34556788999999999999999999999875
No 175
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=57.10 E-value=5.2 Score=41.89 Aligned_cols=69 Identities=16% Similarity=0.101 Sum_probs=49.1
Q ss_pred HHHHHHHHHhhcccHHHHhhhccCc-ccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQPI-DITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLY 308 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~I-dl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~y 308 (526)
++-.|..++.-+|+|..|+...+.. ++-+ .+|-.-.+---+++..+|-.|.-.+||.+|...+...|-=
T Consensus 342 ~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~-~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i 411 (433)
T 3qww_A 342 MMYQAMGVCLYMQDWEGALKYGQKIIKPYS-KHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAI 411 (433)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCHHHHHHHHHHHHHHHH-HHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 3445677788899999999877652 2222 1222222333456889999999999999999999998863
No 176
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=56.47 E-value=9.9 Score=34.78 Aligned_cols=47 Identities=9% Similarity=-0.018 Sum_probs=38.9
Q ss_pred cccHHHHhhhccCc-ccCCcccccccccceehHHHHHHHHHHH----HhhHHHHHHHHHHHHH
Q 009775 250 LGDYHTGLKCLQPI-DITQQGVYTSVIGSHITTIYHYGFANLM----LRRYVDAIREFNKILL 307 (526)
Q Consensus 250 LGDY~~ALk~L~~I-dl~~k~l~~~V~~c~Vs~~YyvGFaYlM----lrRY~DAir~F~~iL~ 307 (526)
.||+..|++.++.. ++ .+...++.+|.+|.. .+++.+|+..|...+-
T Consensus 55 ~~~~~~A~~~~~~a~~~-----------~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~ 106 (273)
T 1ouv_A 55 EKNLKKAASFYAKACDL-----------NYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACD 106 (273)
T ss_dssp CCCHHHHHHHHHHHHHT-----------TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHC-----------CCHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHH
Confidence 99999999887652 22 256788999999999 9999999999998763
No 177
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=56.44 E-value=4.6 Score=39.80 Aligned_cols=66 Identities=12% Similarity=0.075 Sum_probs=44.8
Q ss_pred HHHHHHhhcccHHHHhhhccC-cccCCccc-cc-------ccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 242 GLLRVHCLLGDYHTGLKCLQP-IDITQQGV-YT-------SVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 242 GLlRvh~LLGDY~~ALk~L~~-Idl~~k~l-~~-------~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
.+-..+...|+|..|++..+. |.+.+... +. ........+++..|-||+.+++|.+|+..|..+|.
T Consensus 184 ~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~ 258 (338)
T 2if4_A 184 MDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLT 258 (338)
T ss_dssp HHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 444566678888888887665 44443211 00 00111224789999999999999999999999885
No 178
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=56.16 E-value=5.7 Score=38.20 Aligned_cols=68 Identities=15% Similarity=0.035 Sum_probs=49.2
Q ss_pred HHHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLYI 309 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~yi 309 (526)
++..+-.++...|||..|++.++. +++.++. ..+..........|.+|+..++|.+|+..|...+--.
T Consensus 55 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~---~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~ 123 (373)
T 1hz4_A 55 ATSVLGEVLHCKGELTRSLALMQQTEQMARQH---DVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLI 123 (373)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT---TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhc---CcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 344556778889999999998765 3443321 1222335567889999999999999999999887643
No 179
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=55.74 E-value=5.2 Score=41.69 Aligned_cols=53 Identities=15% Similarity=0.145 Sum_probs=42.7
Q ss_pred HHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 246 VHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 246 vh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
.+...|||..|++.++. |++++. ...+++..|.+|+.+++|.+|+..|...+.
T Consensus 15 ~~~~~g~~~~A~~~~~~Al~~~p~---------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 68 (477)
T 1wao_1 15 DYFKAKDYENAIKFYSQAIELNPS---------NAIYYGNRSLAYLRTECYGYALGDATRAIE 68 (477)
T ss_dssp STTTTTCHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHhCCc---------cHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 44568999999998775 444432 367889999999999999999999998874
No 180
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=54.39 E-value=6 Score=42.08 Aligned_cols=69 Identities=12% Similarity=0.005 Sum_probs=50.6
Q ss_pred HHHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 009775 239 SMVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLY 308 (526)
Q Consensus 239 SlIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~y 308 (526)
++-.|..++.-+|+|..|+...+. +++-+ .+|-...+---+++..+|-.|.-.+||.+|...+...|-=
T Consensus 353 ~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~-~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i 422 (490)
T 3n71_A 353 LLSIASEVLSYLQAYEEASHYARRMVDGYM-KLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAI 422 (490)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHH-HHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 445677788889999999987664 33322 2222233344567889999999999999999999998863
No 181
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=53.73 E-value=8.2 Score=37.04 Aligned_cols=70 Identities=9% Similarity=-0.018 Sum_probs=49.4
Q ss_pred HHHHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 009775 238 FSMVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLY 308 (526)
Q Consensus 238 FSlIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~y 308 (526)
.++..+..++...|||..|++.++. +++.++. -....+....++...|-+|..++++.+|...+...+--
T Consensus 94 ~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 164 (373)
T 1hz4_A 94 WSLIQQSEILFAQGFLQTAWETQEKAFQLINEQ-HLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEV 164 (373)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-TCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHh-ccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 4556777889999999999988765 2332210 00001234456677999999999999999999998753
No 182
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=49.01 E-value=10 Score=39.43 Aligned_cols=117 Identities=13% Similarity=0.073 Sum_probs=69.7
Q ss_pred CCcc-hHHHHHHHHHHHhhhhHHHHHHHHhccCC-cccccCCccCCCCchhhHhhhHHHHHHHHHHHhhcccHHHHhhhc
Q 009775 183 QAWN-VYGVLNFLQALVEKSMIIQILEREKEGLE-QFTATDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCL 260 (526)
Q Consensus 183 ~vW~-~~~VLn~L~sLv~kS~I~e~L~~~~~g~~-~~~~a~~~~~~g~~~l~~mLGYFSlIGLlRvh~LLGDY~~ALk~L 260 (526)
..|. +..+++.+..+-...+..+.++....-.+ ...+- |..+.+ ++. ++-.|..++.-+|+|..|++..
T Consensus 282 ~~~~~~~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~l------g~~h~~-~~~--~~~~L~~~y~~~g~~~eA~~~~ 352 (429)
T 3qwp_A 282 QVWKEVQESLKKIEELKAHWKWEQVLAMCQAIISSNSERL------PDINIY-QLK--VLDCAMDACINLGLLEEALFYG 352 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCC------CTTSHH-HHH--HHHHHHHHHHHHTCHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcC------CccchH-HHH--HHHHHHHHHHhhccHHHHHHHH
Confidence 3564 33456666666655555554444332111 12222 334433 333 3344566677899999999887
Q ss_pred cCc-ccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 009775 261 QPI-DITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLYI 309 (526)
Q Consensus 261 ~~I-dl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~yi 309 (526)
+.. ++-+ .+|-...+---++++.+|-.|.-.++|.+|...+...|--.
T Consensus 353 ~~~L~i~~-~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~ 401 (429)
T 3qwp_A 353 TRTMEPYR-IFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIM 401 (429)
T ss_dssp HHHHHHHH-HHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHhHH-HHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 652 2222 22222233345678899999999999999999999988643
No 183
>1fc3_A SPO0A; response regulator, signaling protein; 2.00A {Geobacillus stearothermophilus} SCOP: a.4.6.3 PDB: 1lq1_A
Probab=48.55 E-value=17 Score=32.04 Aligned_cols=52 Identities=19% Similarity=0.254 Sum_probs=40.0
Q ss_pred HHHhhHHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHhhHHHHHhhccChhhhcchHhhhhhc
Q 009775 323 EQILKKNEQMYALLAICLSLCPQVKHVEETVNSQLREKYGEKMIRMQRYDDEAFSIYDELFSYA 386 (526)
Q Consensus 323 d~i~K~~eqMyaLlAIc~~l~P~~~~lDe~I~~~lrEky~dk~~kmq~Gd~e~f~~~~elF~~a 386 (526)
+.++..+-.+|..+|=-....|++ ++.+|...+.. -|.+||.+.+ .++|.+.
T Consensus 41 ~~l~~itK~LYp~IA~k~~TT~s~--VEraIR~aIe~-------aw~~g~~~~l---~~ifg~t 92 (120)
T 1fc3_A 41 ELLGSITKVLYPDIAKKYNTTASR--VERAIRHAIEV-------AWSRGNLESI---SSLFGYT 92 (120)
T ss_dssp GGGGGTTTTHHHHHHHHHTSCHHH--HHHHHHHHHHH-------HHHSSCTTTT---HHHHCHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHH--HHHHHHHHHHH-------HHHCCCHHHH---HHHHCCC
Confidence 344444556788888777888866 99999888754 6899999999 9999763
No 184
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=47.55 E-value=20 Score=35.66 Aligned_cols=55 Identities=11% Similarity=-0.068 Sum_probs=34.9
Q ss_pred HHhhcccHHHHhhhccCcccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 009775 246 VHCLLGDYHTGLKCLQPIDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKIL 306 (526)
Q Consensus 246 vh~LLGDY~~ALk~L~~Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL 306 (526)
++...|+|..|++.++...-.. .+.-....+|+.|-++--++++.+|++.|..++
T Consensus 144 l~~~~~r~~dA~~~l~~a~~~~------d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~ 198 (282)
T 4f3v_A 144 VYGAAERWTDVIDQVKSAGKWP------DKFLAGAAGVAHGVAAANLALFTEAERRLTEAN 198 (282)
T ss_dssp HHHHTTCHHHHHHHHTTGGGCS------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHhhccC------CcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHh
Confidence 7777888888888777542111 111112356777777777777777777777664
No 185
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=47.22 E-value=24 Score=36.84 Aligned_cols=64 Identities=13% Similarity=0.035 Sum_probs=45.2
Q ss_pred HHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 009775 244 LRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLY 308 (526)
Q Consensus 244 lRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~y 308 (526)
.|-+-..|+|..|+++.+. +++.++ ++..-.+--.+++..+|-+|.-++||.+|+..+...|--
T Consensus 305 ~~~~~~~g~~~eA~~~~~~~L~i~~~-~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i 369 (433)
T 3qww_A 305 FRRAKHYKSPSELLEICELSQEKMSS-VFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKP 369 (433)
T ss_dssp HHHHTTTSCHHHHHHHHHHHHHHHTT-TBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHhhhccCHHHHHHHHHHHHHHhhC-ccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHH
Confidence 3444456889988887755 333332 222223344577899999999999999999999998863
No 186
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=45.25 E-value=18 Score=28.59 Aligned_cols=29 Identities=10% Similarity=0.109 Sum_probs=26.3
Q ss_pred ehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 279 ITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 279 Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
...++..|.+|+.+++|.+|++.|...+-
T Consensus 19 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 47 (115)
T 2kat_A 19 MLLRFTLGKTYAEHEQFDAALPHLRAALD 47 (115)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 46789999999999999999999999874
No 187
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=44.22 E-value=70 Score=30.08 Aligned_cols=127 Identities=10% Similarity=0.008 Sum_probs=71.4
Q ss_pred HHHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceeh-HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhccccc
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHIT-TIYHYGFANLMLRRYVDAIREFNKILLYIYKTKQYHQ 317 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs-~~YyvGFaYlMlrRY~DAir~F~~iL~yi~r~k~~~~ 317 (526)
.+.+.++...+|++..|.++.+. |++++. +.. ++...|-.+.-.+++.+|+.+|...+-.-...-...-
T Consensus 102 ~~~~~~~~~~~~~~~~A~~~~~~al~~~p~---------~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~ 172 (308)
T 2ond_A 102 YFAYADYEESRMKYEKVHSIYNRLLAIEDI---------DPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYV 172 (308)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTSSSS---------CTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhcccc---------CccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHH
Confidence 34556667789999999988765 333332 223 6677788888899999999999998741000000000
Q ss_pred CChhHHH-HhhHHHHHHHHHHHHHhhCCCCcchhhHHHHHHHHHhhHHHHHhhccChhhhcchHhhhhhcCC
Q 009775 318 KSPQYEQ-ILKKNEQMYALLAICLSLCPQVKHVEETVNSQLREKYGEKMIRMQRYDDEAFSIYDELFSYACP 388 (526)
Q Consensus 318 ks~q~d~-i~K~~eqMyaLlAIc~~l~P~~~~lDe~I~~~lrEky~dk~~kmq~Gd~e~f~~~~elF~~acP 388 (526)
....... ..+..++...++--++.++|.. . .+-..+++-. .+.|+.+.- +++|..|.-
T Consensus 173 ~~a~~~~~~~~~~~~A~~~~~~al~~~p~~----~----~~~~~~~~~~--~~~g~~~~A---~~~~~~al~ 231 (308)
T 2ond_A 173 TAALMEYYCSKDKSVAFKIFELGLKKYGDI----P----EYVLAYIDYL--SHLNEDNNT---RVLFERVLT 231 (308)
T ss_dssp HHHHHHHHTSCCHHHHHHHHHHHHHHHTTC----H----HHHHHHHHHH--HTTCCHHHH---HHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCc----H----HHHHHHHHHH--HHCCCHHHH---HHHHHHHHh
Confidence 0000000 0234444555555566677743 1 2223344333 345777766 788887754
No 188
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=42.14 E-value=20 Score=34.89 Aligned_cols=66 Identities=11% Similarity=0.002 Sum_probs=51.0
Q ss_pred HHHHHHHHhhcccHHHHhhhccCccc-CCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQPIDI-TQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLY 308 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~Idl-~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~y 308 (526)
...|.+++--.|+|..|++.++.+.- .++. .-..-.+.++...|-+|+-+++|..|...+..++.-
T Consensus 138 ~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 204 (434)
T 4b4t_Q 138 SIKLATLHYQKKQYKDSLALINDLLREFKKL---DDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTA 204 (434)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHTTS---SCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccChHHHHHHHHHHHHHHHhc---ccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 45677999999999999999987532 1111 112345678999999999999999999999988753
No 189
>1xn7_A Hypothetical protein YHGG; alpha+beta, GFT structural genomics, protein structure initiative, PSI, NESG; NMR {Escherichia coli} SCOP: a.4.5.62
Probab=41.94 E-value=24 Score=28.62 Aligned_cols=43 Identities=14% Similarity=0.290 Sum_probs=37.6
Q ss_pred hhhhhhhhhhhccccChhHHhcccCCChhHHHHHHHHHhhccc
Q 009775 426 LLSGVRSFLKVYSSLYLSELATYMEVDEPTLRTILMTYKHKTH 468 (526)
Q Consensus 426 ~l~~lRsyLKLYtti~l~KLAsfldvd~~~lr~~Ll~~K~k~r 468 (526)
.|..|..+|+-...++++.||..++|+++++|..|-..-.+..
T Consensus 3 ~L~~Il~~L~~~g~vsv~eLa~~l~VS~~TIRrdL~~Le~~G~ 45 (78)
T 1xn7_A 3 SLIQVRDLLALRGRMEAAQISQTLNTPQPMINAMLQQLESMGK 45 (78)
T ss_dssp CHHHHHHHHHHSCSBCHHHHHHHTTCCHHHHHHHHHHHHHHTS
T ss_pred hHHHHHHHHHHcCCCcHHHHHHHHCcCHHHHHHHHHHHHHCCC
Confidence 3567899999999999999999999999999998877766644
No 190
>1wdp_A Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.27A {Glycine max} SCOP: c.1.8.1 PDB: 1bfn_A* 1q6c_A 1wdr_A* 1v3i_A* 1v3h_A* 1q6d_A* 1q6g_A* 1wdq_A* 1wds_A* 1q6e_A* 1q6f_A* 2dqx_A 1byb_A* 1bya_A* 1byc_A* 1byd_A* 1uko_A 1ukp_A 1btc_A*
Probab=40.87 E-value=14 Score=39.81 Aligned_cols=30 Identities=43% Similarity=0.986 Sum_probs=25.0
Q ss_pred HHHhHHHHHHHHhc---------------C----CcccCCchhHHHHhhh
Q 009775 121 SWDNYCSLFQVVLH---------------G----VVNMQLPNQWLWDMVD 151 (526)
Q Consensus 121 Sw~nYc~LF~~lL~---------------g----~v~l~LPn~WlWDiiD 151 (526)
-|.-|.+||..+-. | .+++.|| +|+|++.+
T Consensus 68 dWsgY~~l~~mv~~~GLKlq~vmSFHqCGgNVGD~~~IPLP-~WV~~~~~ 116 (495)
T 1wdp_A 68 DWRAYRSLLQLVQECGLTLQAIMSFHQCGGNVGDIVNIPIP-QWVLDIGE 116 (495)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEEECSCBCCSTTCSCCBCSC-HHHHHHHH
T ss_pred CcHHHHHHHHHHHHcCCeEEEEEEeeecCCCCCCcccccCC-HHHHHhhc
Confidence 58999999999874 3 3678888 89999887
No 191
>2xfr_A Beta-amylase; hydrolase, carbohydrate metabolism, glycosyl hydrolase famil starch degradation, germination; 0.97A {Hordeum vulgare} PDB: 2xff_A 2xfy_A* 2xg9_A* 2xgb_A* 2xgi_A* 1b1y_A*
Probab=40.39 E-value=15 Score=40.04 Aligned_cols=30 Identities=40% Similarity=0.929 Sum_probs=25.0
Q ss_pred HHHhHHHHHHHHhc---------------C----CcccCCchhHHHHhhh
Q 009775 121 SWDNYCSLFQVVLH---------------G----VVNMQLPNQWLWDMVD 151 (526)
Q Consensus 121 Sw~nYc~LF~~lL~---------------g----~v~l~LPn~WlWDiiD 151 (526)
-|.-|.+||..+-. | .+++.|| +|+|++.+
T Consensus 66 dWsgY~~L~~mvr~~GLKlq~vmSFHqCGgNVGD~~~IPLP-~WV~e~~~ 114 (535)
T 2xfr_A 66 DWSAYKQLFELVQKAGLKLQAIMSFHQCGGNVGDAVNIPIP-QWVRDVGT 114 (535)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEEECSCBCCSTTCSCCBCSC-HHHHHHHH
T ss_pred CcHHHHHHHHHHHHcCCeEEEEEEeeecCCCCCCcccccCC-HHHHHhhh
Confidence 59999999999874 3 3678888 89999887
No 192
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=39.18 E-value=38 Score=35.08 Aligned_cols=58 Identities=10% Similarity=-0.078 Sum_probs=43.7
Q ss_pred hcccHHHHhhhccCc-ccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 249 LLGDYHTGLKCLQPI-DITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 249 LLGDY~~ALk~L~~I-dl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
-.|+|..|++..+.. ++. ..++..--....+++..+|-+|.-++||.+|+..+..+|-
T Consensus 299 ~~g~~~~a~~~~~~~L~~~-~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~ 357 (429)
T 3qwp_A 299 AHWKWEQVLAMCQAIISSN-SERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTME 357 (429)
T ss_dssp HTTCHHHHHHHHHHHHTCS-SCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hhccHHHHHHHHHHHHHhc-cCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Confidence 468999998876542 332 2333334445678899999999999999999999999885
No 193
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=37.83 E-value=73 Score=32.49 Aligned_cols=30 Identities=17% Similarity=0.377 Sum_probs=16.6
Q ss_pred CcHHHHHHHHHHHHHhhhcCHHHHHHHHHh
Q 009775 35 VPDSVKSFVVHLYRHIREKNVYEIHQMYET 64 (526)
Q Consensus 35 vP~~Vk~Fl~~l~~~i~e~nv~eI~~lYE~ 64 (526)
.|..+.-++.+..-..+.++..+...+|+.
T Consensus 42 ~P~~~~~w~~~~~~~~~~~~~~~a~~~~~r 71 (530)
T 2ooe_A 42 FPSSGRFWKLYIEAEIKAKNYDKVEKLFQR 71 (530)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 455555555555545555566666665555
No 194
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=37.82 E-value=36 Score=36.90 Aligned_cols=57 Identities=14% Similarity=0.072 Sum_probs=42.6
Q ss_pred hhcccHHHHhhhccCcc---cCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 248 CLLGDYHTGLKCLQPID---ITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 248 ~LLGDY~~ALk~L~~Id---l~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
...|||..|++.++..- +... ....+-+...++..|.+|+.+++|.+|+..|...+-
T Consensus 402 ~~~~~~~~A~~~~~~al~~~~~~~---~~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~ 461 (681)
T 2pzi_A 402 TVLSQPVQTLDSLRAARHGALDAD---GVDFSESVELPLMEVRALLDLGDVAKATRKLDDLAE 461 (681)
T ss_dssp TTTCCHHHHHHHHHHHHTC----------CCTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHhhhhccccc---ccccccchhHHHHHHHHHHhcCCHHHHHHHHHHHhc
Confidence 67899999999887632 1100 012244677899999999999999999999999874
No 195
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=36.80 E-value=96 Score=32.79 Aligned_cols=102 Identities=14% Similarity=0.054 Sum_probs=61.9
Q ss_pred HHHHHHHhhcccHHHHhhhccC-cccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhh-------
Q 009775 241 VGLLRVHCLLGDYHTGLKCLQP-IDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILLYIYKT------- 312 (526)
Q Consensus 241 IGLlRvh~LLGDY~~ALk~L~~-Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~yi~r~------- 312 (526)
+....-.--.|+|..|+.+.+. +++.+ .++..--+--.+++..+|-+|.-++||.+|+..+...|--..+.
T Consensus 313 le~a~~~~~qg~~~eA~~l~~~aL~~~~-~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~ 391 (490)
T 3n71_A 313 LEKIDKARSEGLYHEVVKLCRECLEKQE-PVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQ 391 (490)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHHHHHT-TTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHH-HhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHH
Confidence 3333334467999999887654 33322 22333334456788999999999999999999999988531111
Q ss_pred --------cccccCChhHHHHhhHHHHHHHHHHHHHhhCCC
Q 009775 313 --------KQYHQKSPQYEQILKKNEQMYALLAICLSLCPQ 345 (526)
Q Consensus 313 --------k~~~~ks~q~d~i~K~~eqMyaLlAIc~~l~P~ 345 (526)
-..+....+++...+..+|..++.-. ++-|.
T Consensus 392 ~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~--~lG~~ 430 (490)
T 3n71_A 392 LGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLV--THGPS 430 (490)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH--HTCTT
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH--HhCCC
Confidence 11111223566666666666555544 34453
No 196
>1fa2_A Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.30A {Ipomoea batatas} SCOP: c.1.8.1
Probab=36.52 E-value=16 Score=39.47 Aligned_cols=30 Identities=40% Similarity=0.906 Sum_probs=24.9
Q ss_pred HHHhHHHHHHHHhc---------------C----CcccCCchhHHHHhhh
Q 009775 121 SWDNYCSLFQVVLH---------------G----VVNMQLPNQWLWDMVD 151 (526)
Q Consensus 121 Sw~nYc~LF~~lL~---------------g----~v~l~LPn~WlWDiiD 151 (526)
-|.-|.+||..+-. | .+++.|| +|+|++.+
T Consensus 69 dWsgY~~L~~mv~~~GLKlq~vmSFHqCGgNVGD~~~IPLP-~WV~~~~~ 117 (498)
T 1fa2_A 69 DWSAYRELFQLVKKCGLKIQAIMSFHQCGGNVGDAVFIPIP-QWILQIGD 117 (498)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEEECSCBCCCTTCCCCBCSC-HHHHHHTT
T ss_pred CcHHHHHHHHHHHHcCCeEEEEEEeeecCCCCCCcccccCC-HHHHHhhc
Confidence 58999999999874 3 3678888 89999887
No 197
>2k02_A Ferrous iron transport protein C; FEOC, iron-sulfur, metal-binding, metal binding protein; NMR {Klebsiella pneumoniae subsp}
Probab=33.34 E-value=31 Score=28.74 Aligned_cols=42 Identities=17% Similarity=0.282 Sum_probs=37.1
Q ss_pred hhhhhhhhhhhccccChhHHhcccCCChhHHHHHHHHHhhcc
Q 009775 426 LLSGVRSFLKVYSSLYLSELATYMEVDEPTLRTILMTYKHKT 467 (526)
Q Consensus 426 ~l~~lRsyLKLYtti~l~KLAsfldvd~~~lr~~Ll~~K~k~ 467 (526)
.|..|..+|+-...++++.||..++|+++++|..|-..-.+.
T Consensus 3 ~L~~Il~~L~~~g~vsv~eLA~~l~VS~~TIRrDL~~Le~~G 44 (87)
T 2k02_A 3 SLMEVRDMLALQGRMEAKQLSARLQTPQPLIDAMLERMEAMG 44 (87)
T ss_dssp CTHHHHHHHHHSCSEEHHHHHHHTTCCHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHcCCCcHHHHHHHHCcCHHHHHHHHHHHHHCC
Confidence 466789999999999999999999999999999887776664
No 198
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=31.38 E-value=35 Score=30.24 Aligned_cols=52 Identities=15% Similarity=0.220 Sum_probs=37.6
Q ss_pred cccHHHHhhhccCcccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 250 LGDYHTGLKCLQPIDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 250 LGDY~~ALk~L~~Idl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
-.|-..++.+|+.+==+. -|.-.---.||+|++|.=++.|..|.+.+..+|-
T Consensus 51 ~~d~~~GI~lLe~l~~~~------~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~ 102 (126)
T 1nzn_A 51 NDDIRKGIVLLEELLPKG------SKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQ 102 (126)
T ss_dssp HHHHHHHHHHHHHHTTTS------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcC------CcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 455566788877632211 1223445589999999999999999999999885
No 199
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=31.27 E-value=20 Score=33.90 Aligned_cols=58 Identities=14% Similarity=0.009 Sum_probs=46.3
Q ss_pred HHHHHHHHhhcccHHHHhhhccCc-ccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 009775 240 MVGLLRVHCLLGDYHTGLKCLQPI-DITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNKIL 306 (526)
Q Consensus 240 lIGLlRvh~LLGDY~~ALk~L~~I-dl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~iL 306 (526)
++.+...+.-.||+..|+..++.. .+++ -+....+..|-+|+-++|+.+|+..|..++
T Consensus 120 ~~~~a~~~~~~g~~~~A~~~~~~al~~~P---------~~~~a~~~la~~~~~~g~~~~A~~~l~~~~ 178 (287)
T 3qou_A 120 XAQQAMQLMQESNYTDALPLLXDAWQLSN---------QNGEIGLLLAETLIALNRSEDAEAVLXTIP 178 (287)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHTT---------SCHHHHHHHHHHHHHTTCHHHHHHHHTTSC
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHhCC---------cchhHHHHHHHHHHHCCCHHHHHHHHHhCc
Confidence 356677778899999999988763 3333 245678899999999999999999998864
No 200
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=30.22 E-value=22 Score=36.33 Aligned_cols=28 Identities=18% Similarity=0.405 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 009775 282 IYHYGFANLMLRRYVDAIREFNKILLYI 309 (526)
Q Consensus 282 ~YyvGFaYlMlrRY~DAir~F~~iL~yi 309 (526)
--..||.++=-+++.||+.+|..||..+
T Consensus 105 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i 132 (320)
T 3mkr_B 105 RLQLCYQLTTVGKFEEAVEKFRSILLSV 132 (320)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHh
Confidence 4578999999999999999999999765
No 201
>2vxg_A LD41624, GE-1, CG6181-PA, isoform A; decapping, EDC4, hedls, mRNA decay, P-BODY, gene regulation; 1.9A {Drosophila melanogaster}
Probab=30.14 E-value=29 Score=31.29 Aligned_cols=43 Identities=7% Similarity=0.078 Sum_probs=31.6
Q ss_pred hHHHHHHHH-HhhHHHHH-hhccChhhhcchHhhhhhcCCCc-ccCCCC
Q 009775 351 ETVNSQLRE-KYGEKMIR-MQRYDDEAFSIYDELFSYACPKF-ITPSAP 396 (526)
Q Consensus 351 e~I~~~lrE-ky~dk~~k-mq~Gd~e~f~~~~elF~~acPKF-Isp~~P 396 (526)
+.|.+-|.| +|.+-|.+ ++++|.+.| ..+|+..-|.+ ++|.|.
T Consensus 5 ~~I~~Ll~~g~~eeAf~~aL~ssd~~lv---~~lc~~~dp~~~~~~~~~ 50 (139)
T 2vxg_A 5 DSIKQLLMAGQINKAFHQALLANDLGLV---EFTLRHTDSNQAFAPEGC 50 (139)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHTTCHHHH---HHHHHHSCHHHHTC----
T ss_pred HHHHHHHHCCCHHHHHHHHHHhCcHHHH---HHHHHcCCHHHhcCCCCC
Confidence 456666665 68888888 678998877 99999999998 766543
No 202
>3hug_A RNA polymerase sigma factor; ECF sigma factor, zinc binding anti-sigma factor, oxidative transcription regulation; 2.35A {Mycobacterium tuberculosis}
Probab=28.74 E-value=1.1e+02 Score=24.22 Aligned_cols=43 Identities=16% Similarity=0.206 Sum_probs=34.8
Q ss_pred hhhhhhhhh--ccccChhHHhcccCCChhHHHHHHHHHhhccccc
Q 009775 428 SGVRSFLKV--YSSLYLSELATYMEVDEPTLRTILMTYKHKTHAV 470 (526)
Q Consensus 428 ~~lRsyLKL--Ytti~l~KLAsfldvd~~~lr~~Ll~~K~k~r~l 470 (526)
+.-|.-+.| +.-++.+.+|..|++++.+++..+...+.+.|..
T Consensus 40 ~~~r~vl~l~~~~g~s~~eIA~~lgis~~tV~~~l~ra~~~Lr~~ 84 (92)
T 3hug_A 40 AEHRAVIQRSYYRGWSTAQIATDLGIAEGTVKSRLHYAVRALRLT 84 (92)
T ss_dssp HHHHHHHHHHHTSCCCHHHHHHHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHCcCHHHHHHHHHHHHHHHHHH
Confidence 455555555 6789999999999999999999988888776653
No 203
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=28.10 E-value=22 Score=29.16 Aligned_cols=18 Identities=39% Similarity=0.635 Sum_probs=16.1
Q ss_pred HHHHHHHhhcccHHHHhh
Q 009775 241 VGLLRVHCLLGDYHTGLK 258 (526)
Q Consensus 241 IGLlRvh~LLGDY~~ALk 258 (526)
+-+.|=++|+|||.+|+.
T Consensus 16 ~k~ARe~Al~GnYdta~~ 33 (78)
T 2rpa_A 16 VKLAREYALLGNYDSAMV 33 (78)
T ss_dssp HHHHHHHHHHTCCHHHHH
T ss_pred HHHHHHHHHhcChHHHHH
Confidence 568899999999999986
No 204
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=27.50 E-value=63 Score=32.50 Aligned_cols=61 Identities=15% Similarity=0.114 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHhhcccHHHHhhhccCc-ccCCcccccccccceehHHHHHHHHHHHHhhHHHHHHHHHH
Q 009775 237 YFSMVGLLRVHCLLGDYHTGLKCLQPI-DITQQGVYTSVIGSHITTIYHYGFANLMLRRYVDAIREFNK 304 (526)
Q Consensus 237 YFSlIGLlRvh~LLGDY~~ALk~L~~I-dl~~k~l~~~V~~c~Vs~~YyvGFaYlMlrRY~DAir~F~~ 304 (526)
.++.+-+.++....||+..||+++... +.++. .=++....=.+.+|+.++|...|.+.|..
T Consensus 100 ~~~~~~la~i~~~~g~~eeAL~~l~~~i~~~~~-------~~~lea~~l~vqi~L~~~r~d~A~k~l~~ 161 (310)
T 3mv2_B 100 PYELYLLATAQAILGDLDKSLETCVEGIDNDEA-------EGTTELLLLAIEVALLNNNVSTASTIFDN 161 (310)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTSSCS-------TTHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCC-------cCcHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 455566778888899999999998864 44431 12233344455888888888888888765
No 205
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=26.85 E-value=55 Score=24.69 Aligned_cols=26 Identities=8% Similarity=-0.029 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHH
Q 009775 282 IYHYGFANLMLRRYVDAIREFNKILL 307 (526)
Q Consensus 282 ~YyvGFaYlMlrRY~DAir~F~~iL~ 307 (526)
.|..|.+|+..++|.+|++.|...+.
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~ 28 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQ 28 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 46789999999999999999999874
No 206
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=22.30 E-value=47 Score=33.54 Aligned_cols=44 Identities=18% Similarity=0.379 Sum_probs=34.6
Q ss_pred CcHHHHHHHHHHHHHhhhcCHHHHHHHHHhhHHHhHHHhcCCCCCCCH
Q 009775 35 VPDSVKSFVVHLYRHIREKNVYEIHQMYETSFQSLSDRLFKDTPWPSV 82 (526)
Q Consensus 35 vP~~Vk~Fl~~l~~~i~e~nv~eI~~lYE~~F~~lte~yfk~s~WP~~ 82 (526)
+-+-|.+-+..|...|.++|-||-|++|.+ +..||-+...|.++
T Consensus 9 m~~~~~r~l~rl~~~I~~G~yYEAhQ~~Rt----l~~Ry~~~~~~~eA 52 (312)
T 2wpv_A 9 VQAKLAKTLQRFENKIKAGDYYEAHQTLRT----IANRYVRSKSYEHA 52 (312)
T ss_dssp ---CHHHHHHHHHHHHHHTCHHHHHHHHHH----HHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHHHhhccChHHHHHHHHH----HHHHHHHhcCHHHH
Confidence 444689999999999999999999999998 55666676666533
Done!