Query 009777
Match_columns 526
No_of_seqs 187 out of 768
Neff 5.2
Searched_HMMs 29240
Date Mon Mar 25 12:46:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009777.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009777hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4h08_A Putative hydrolase; GDS 44.2 12 0.0004 33.5 2.7 52 356-433 73-124 (200)
2 4hf7_A Putative acylhydrolase; 43.2 7.6 0.00026 35.4 1.3 15 256-271 28-42 (209)
3 3hp4_A GDSL-esterase; psychrot 41.1 10 0.00036 33.1 1.8 12 256-267 4-15 (185)
4 1es9_A PAF-AH, platelet-activa 36.9 13 0.00044 34.2 1.7 67 399-485 112-179 (232)
5 1fxw_F Alpha2, platelet-activa 35.3 15 0.0005 33.9 1.8 66 399-484 113-179 (229)
6 3t6g_B Breast cancer anti-estr 33.2 3.9 0.00013 39.8 -2.5 12 256-267 148-159 (229)
7 1yzf_A Lipase/acylhydrolase; s 32.5 13 0.00043 32.4 0.9 12 256-267 3-14 (195)
8 3p94_A GDSL-like lipase; serin 32.4 14 0.00047 32.7 1.1 29 399-432 98-126 (204)
9 3mil_A Isoamyl acetate-hydroly 32.4 15 0.00051 33.3 1.3 28 399-431 97-124 (240)
10 1fll_X B-cell surface antigen 32.0 19 0.00066 23.5 1.4 12 502-513 5-16 (26)
11 1ivn_A Thioesterase I; hydrola 30.8 15 0.0005 32.5 1.0 12 256-267 3-14 (190)
12 3rjt_A Lipolytic protein G-D-S 30.1 16 0.00053 32.4 1.0 12 256-267 10-21 (216)
13 2hsj_A Putative platelet activ 29.2 17 0.0006 32.4 1.2 31 399-432 106-136 (214)
14 1vjg_A Putative lipase from th 28.6 17 0.00058 32.8 1.0 12 256-267 22-33 (218)
15 2q0q_A ARYL esterase; SGNH hyd 27.7 18 0.0006 32.4 0.9 24 471-494 173-198 (216)
16 2vpt_A Lipolytic enzyme; ester 27.5 18 0.00061 32.9 0.9 26 403-431 106-131 (215)
17 3dc7_A Putative uncharacterize 24.4 25 0.00084 32.1 1.3 27 399-428 111-137 (232)
18 3dci_A Arylesterase; SGNH_hydr 24.2 22 0.00076 32.7 0.9 33 399-431 124-158 (232)
No 1
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=44.18 E-value=12 Score=33.51 Aligned_cols=52 Identities=19% Similarity=0.384 Sum_probs=33.8
Q ss_pred CcccEEEEcCccccCCCccccCeeeEEeCCccCCCcchhhhhhHHHHHHHHHHHHHHhhCCCCCCceEEEEecCCCcc
Q 009777 356 HKFDVLVLNTGHHWNRGKLKANRWVMHVGGMPNTNRKIADIAGAKNFTIHSIVSWVNSQLPEHPRLKAFYRSISPRHF 433 (526)
Q Consensus 356 ~~~DVLVfNTGhWW~r~~~~~~~~~~~~gg~~~~~~~~~~~~~Ay~~al~Twa~wV~~~ld~~~~t~VFfRT~SP~HF 433 (526)
...|+|||+.|.. .. .. -...|+..|+.+++.+.+.. ++++|+|.+..|...
T Consensus 73 ~~pd~Vvi~~G~N----D~----------~~---------~~~~~~~~l~~ii~~l~~~~---p~~~ii~~~~~P~~~ 124 (200)
T 4h08_A 73 TKFDVIHFNNGLH----GF----------DY---------TEEEYDKSFPKLIKIIRKYA---PKAKLIWANTTPVRT 124 (200)
T ss_dssp SCCSEEEECCCSS----CT----------TS---------CHHHHHHHHHHHHHHHHHHC---TTCEEEEECCCCCEE
T ss_pred CCCCeEEEEeeeC----CC----------CC---------CHHHHHHHHHHHHHHHhhhC---CCccEEEeccCCCcc
Confidence 4679999998853 00 00 01346777888877775543 356789999888654
No 2
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=43.24 E-value=7.6 Score=35.44 Aligned_cols=15 Identities=13% Similarity=0.525 Sum_probs=12.5
Q ss_pred ceEEEeechhhhHHHH
Q 009777 256 TLAFIGDSLGRQQFQS 271 (526)
Q Consensus 256 rLaFVGDSL~RNQweS 271 (526)
+|+|+||||++. |..
T Consensus 28 ~Iv~~GDSit~g-w~~ 42 (209)
T 4hf7_A 28 RVVFMGNXITEG-WVR 42 (209)
T ss_dssp CEEEEESHHHHH-HHH
T ss_pred eEEEECcHHHhC-hhH
Confidence 899999999974 543
No 3
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=41.06 E-value=10 Score=33.07 Aligned_cols=12 Identities=33% Similarity=0.650 Sum_probs=10.8
Q ss_pred ceEEEeechhhh
Q 009777 256 TLAFIGDSLGRQ 267 (526)
Q Consensus 256 rLaFVGDSL~RN 267 (526)
+|+|+||||+..
T Consensus 4 ~i~~~GDSit~G 15 (185)
T 3hp4_A 4 TILILGDXLSAA 15 (185)
T ss_dssp EEEEEECTTTTT
T ss_pred eEEEECCccccc
Confidence 799999999974
No 4
>1es9_A PAF-AH, platelet-activating factor acetylhydrolase IB gamma subunit; alpha/beta hydrolase fold; 1.30A {Bos taurus} SCOP: c.23.10.3 PDB: 1wab_A 1fxw_A 1bwr_A 1bwq_A 1bwp_A 3dt9_A* 3dt6_A* 3dt8_A*
Probab=36.88 E-value=13 Score=34.21 Aligned_cols=67 Identities=16% Similarity=0.155 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHhhCCCCCCceEEEEecCCCcccCCCCCCCCCCCccccCCCCccccccCcchhhhhh-cccCCceEE
Q 009777 399 AKNFTIHSIVSWVNSQLPEHPRLKAFYRSISPRHFVNGDWNTGGSCDNTTPMSIGKEVLQDESGDYSAGS-AVKGTGVKL 477 (526)
Q Consensus 399 Ay~~al~Twa~wV~~~ld~~~~t~VFfRT~SP~HFegGeWn~GG~C~~T~Pi~~~e~~~~~~~~~~~~~~-a~~~~~v~L 477 (526)
.|...++.+++.+.+.. ++++|++-+..|..... .++. + . ....+..+.+ +.+..++.+
T Consensus 112 ~~~~~l~~~i~~l~~~~---p~~~ii~~~~~p~~~~~------------~~~~--~-~--~~~~n~~l~~~~a~~~~v~~ 171 (232)
T 1es9_A 112 QVTGGIKAIVQLVNERQ---PQARVVVLGLLPRGQHP------------NPLR--E-K--NRRVNELVRAALAGHPRAHF 171 (232)
T ss_dssp HHHHHHHHHHHHHHHHS---TTCEEEEECCCCCSSSC------------CHHH--H-H--HHHHHHHHHHHHHSCTTEEE
T ss_pred HHHHHHHHHHHHHHHHC---CCCeEEEecCCCCCCCc------------hhHH--H-H--HHHHHHHHHHHHhhcCCCEE
Confidence 45556777777776553 35689999887743210 0110 0 0 0112333333 345578999
Q ss_pred eecccccc
Q 009777 478 LDITALSQ 485 (526)
Q Consensus 478 LDIT~LS~ 485 (526)
+|+.....
T Consensus 172 iD~~~~~~ 179 (232)
T 1es9_A 172 LDADPGFV 179 (232)
T ss_dssp ECCCCCCS
T ss_pred EeChHHhc
Confidence 99987543
No 5
>1fxw_F Alpha2, platelet-activating factor acetylhydrolase IB beta subunit; alpha beta hydrolase fold; 2.10A {Bos taurus} SCOP: c.23.10.3 PDB: 1vyh_A
Probab=35.30 E-value=15 Score=33.87 Aligned_cols=66 Identities=20% Similarity=0.182 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHhhCCCCCCceEEEEecCCCcccCCCCCCCCCCCccccCCCCccccccCcchhhhhhccc-CCceEE
Q 009777 399 AKNFTIHSIVSWVNSQLPEHPRLKAFYRSISPRHFVNGDWNTGGSCDNTTPMSIGKEVLQDESGDYSAGSAVK-GTGVKL 477 (526)
Q Consensus 399 Ay~~al~Twa~wV~~~ld~~~~t~VFfRT~SP~HFegGeWn~GG~C~~T~Pi~~~e~~~~~~~~~~~~~~a~~-~~~v~L 477 (526)
.|...|+.+++.+.+.. ++++|++-++.|..... + ++. . . ....+..+.+... ..++.+
T Consensus 113 ~~~~~l~~~i~~l~~~~---p~~~iil~~~~p~~~~~--~----------~~~--~-~--~~~~n~~l~~~a~~~~~v~~ 172 (229)
T 1fxw_F 113 EVAGGIEAIVQLINTRQ---PQAKIIVLGLLPRGEKP--N----------PLR--Q-K--NAKVNQLLKVSLPKLANVQL 172 (229)
T ss_dssp HHHHHHHHHHHHHHHHC---TTCEEEEECCCCCSSSC--C----------HHH--H-H--HHHHHHHHHHHSSSSSSEEE
T ss_pred HHHHHHHHHHHHHHHHC---CCCeEEEEeCCCCCCch--h----------hHH--H-H--HHHHHHHHHHHHhcCCCeEE
Confidence 45556777777776543 35678888877654210 0 110 0 0 0112333333443 468999
Q ss_pred eeccccc
Q 009777 478 LDITALS 484 (526)
Q Consensus 478 LDIT~LS 484 (526)
+|+....
T Consensus 173 iD~~~~~ 179 (229)
T 1fxw_F 173 LDTDGGF 179 (229)
T ss_dssp ECCCCSC
T ss_pred EeCHHHh
Confidence 9998754
No 6
>3t6g_B Breast cancer anti-estrogen resistance protein 1; CDC25-homology domain, GTPase exchange factor, focal-adhesio targeting domain, signaling protein; 2.50A {Homo sapiens}
Probab=33.19 E-value=3.9 Score=39.81 Aligned_cols=12 Identities=67% Similarity=1.104 Sum_probs=11.3
Q ss_pred ceEEEeechhhh
Q 009777 256 TLAFIGDSLGRQ 267 (526)
Q Consensus 256 rLaFVGDSL~RN 267 (526)
+|+||||.|+|+
T Consensus 148 KLVfIGDTL~r~ 159 (229)
T 3t6g_B 148 KLVFIGDTLSRQ 159 (229)
T ss_dssp HHHHHHHHHHHS
T ss_pred eeeeecchHHHh
Confidence 999999999986
No 7
>1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5
Probab=32.54 E-value=13 Score=32.39 Aligned_cols=12 Identities=25% Similarity=0.545 Sum_probs=11.0
Q ss_pred ceEEEeechhhh
Q 009777 256 TLAFIGDSLGRQ 267 (526)
Q Consensus 256 rLaFVGDSL~RN 267 (526)
+|+|+|||++..
T Consensus 3 ~i~~~GDS~t~g 14 (195)
T 1yzf_A 3 KIVLFGDSITAG 14 (195)
T ss_dssp EEEEEESHHHHC
T ss_pred eEEEEccccccC
Confidence 799999999987
No 8
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=32.37 E-value=14 Score=32.69 Aligned_cols=29 Identities=14% Similarity=0.174 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHHhhCCCCCCceEEEEecCCCc
Q 009777 399 AKNFTIHSIVSWVNSQLPEHPRLKAFYRSISPRH 432 (526)
Q Consensus 399 Ay~~al~Twa~wV~~~ld~~~~t~VFfRT~SP~H 432 (526)
.|...++.+++.+.+ ++.+|++-+..|..
T Consensus 98 ~~~~~~~~~i~~~~~-----~~~~vil~~~~p~~ 126 (204)
T 3p94_A 98 NVFGNLVSMAELAKA-----NHIKVIFCSVLPAY 126 (204)
T ss_dssp HHHHHHHHHHHHHHH-----TTCEEEEECCCCCS
T ss_pred HHHHHHHHHHHHHHh-----CCCeEEEEeCCCCC
Confidence 455566776666643 25678998887764
No 9
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae}
Probab=32.36 E-value=15 Score=33.28 Aligned_cols=28 Identities=14% Similarity=0.040 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHhhCCCCCCceEEEEecCCC
Q 009777 399 AKNFTIHSIVSWVNSQLPEHPRLKAFYRSISPR 431 (526)
Q Consensus 399 Ay~~al~Twa~wV~~~ld~~~~t~VFfRT~SP~ 431 (526)
.|...++.+++-+.+. +.+|++-+..|.
T Consensus 97 ~~~~~l~~~i~~~~~~-----~~~vil~~~~p~ 124 (240)
T 3mil_A 97 EFIDNIRQMVSLMKSY-----HIRPIIIGPGLV 124 (240)
T ss_dssp HHHHHHHHHHHHHHHT-----TCEEEEECCCCC
T ss_pred HHHHHHHHHHHHHHHc-----CCeEEEEcCCCC
Confidence 4666677777666542 347888886664
No 10
>1fll_X B-cell surface antigen CD40; TRAF3 with CD40 peptide, TNF signaling, apoptosis; 3.50A {Homo sapiens}
Probab=31.98 E-value=19 Score=23.48 Aligned_cols=12 Identities=42% Similarity=0.432 Sum_probs=10.0
Q ss_pred CCCCceeccCCC
Q 009777 502 GVQDCLHWCLPG 513 (526)
Q Consensus 502 ~~~DClHWCLPG 513 (526)
.++|-+|||+|=
T Consensus 5 pvqeTl~~~qPV 16 (26)
T 1fll_X 5 PVQETLHGSQPV 16 (26)
T ss_dssp CCCCCCCCSSSC
T ss_pred ChhHHhhcCccc
Confidence 458999999983
No 11
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=30.77 E-value=15 Score=32.49 Aligned_cols=12 Identities=50% Similarity=0.706 Sum_probs=10.9
Q ss_pred ceEEEeechhhh
Q 009777 256 TLAFIGDSLGRQ 267 (526)
Q Consensus 256 rLaFVGDSL~RN 267 (526)
+|+|+|||++..
T Consensus 3 ~i~~~GDSit~g 14 (190)
T 1ivn_A 3 TLLILGDSLSAG 14 (190)
T ss_dssp EEEEEECHHHHC
T ss_pred cEEEEecCcccC
Confidence 799999999876
No 12
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=30.14 E-value=16 Score=32.38 Aligned_cols=12 Identities=33% Similarity=0.595 Sum_probs=11.0
Q ss_pred ceEEEeechhhh
Q 009777 256 TLAFIGDSLGRQ 267 (526)
Q Consensus 256 rLaFVGDSL~RN 267 (526)
+|+|+||||+..
T Consensus 10 ~i~~~GDSit~g 21 (216)
T 3rjt_A 10 KLVMVGDSITDC 21 (216)
T ss_dssp EEEEEESHHHHT
T ss_pred EEEEEecccccc
Confidence 899999999965
No 13
>2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3
Probab=29.23 E-value=17 Score=32.41 Aligned_cols=31 Identities=19% Similarity=0.174 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHHhhCCCCCCceEEEEecCCCc
Q 009777 399 AKNFTIHSIVSWVNSQLPEHPRLKAFYRSISPRH 432 (526)
Q Consensus 399 Ay~~al~Twa~wV~~~ld~~~~t~VFfRT~SP~H 432 (526)
.|...++.+++.+.+.. +..+|++-+..|..
T Consensus 106 ~~~~~l~~~i~~l~~~~---p~~~iil~~~~p~~ 136 (214)
T 2hsj_A 106 EALNNLEAIIQSVARDY---PLTEIKLLSILPVN 136 (214)
T ss_dssp HHHHHHHHHHHHHHHHC---TTCEEEEECCCCCC
T ss_pred HHHHHHHHHHHHHHHhC---CCCeEEEEecCCCC
Confidence 45566777777776543 34678999987765
No 14
>1vjg_A Putative lipase from the G-D-S-L family; structural genomics center for structural genomics, JCSG, protein structure INI PSI, hydrolase; 2.01A {Nostoc SP} SCOP: c.23.10.6 PDB: 1z8h_A
Probab=28.64 E-value=17 Score=32.84 Aligned_cols=12 Identities=33% Similarity=0.686 Sum_probs=11.2
Q ss_pred ceEEEeechhhh
Q 009777 256 TLAFIGDSLGRQ 267 (526)
Q Consensus 256 rLaFVGDSL~RN 267 (526)
+|+|+||||+..
T Consensus 22 ~i~~lGDSit~g 33 (218)
T 1vjg_A 22 RICFVGDSFVNG 33 (218)
T ss_dssp EEEEEESHHHHT
T ss_pred eEEEEccccccC
Confidence 999999999986
No 15
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A*
Probab=27.75 E-value=18 Score=32.37 Aligned_cols=24 Identities=17% Similarity=0.235 Sum_probs=15.5
Q ss_pred cCCceEEeecccccc-cccCC-CCcc
Q 009777 471 KGTGVKLLDITALSQ-VRDEG-HISQ 494 (526)
Q Consensus 471 ~~~~v~LLDIT~LS~-lR~DG-HPs~ 494 (526)
+...+.++|+..... +..|| ||+.
T Consensus 173 ~~~~v~~iD~~~~~~~~~~Dg~Hpn~ 198 (216)
T 2q0q_A 173 SFMKVPFFDAGSVISTDGVDGIHFTE 198 (216)
T ss_dssp HHHTCCEEEGGGTCCCCSTTSSSCCH
T ss_pred HHcCCcEEchhHhcccCCCCccCcCH
Confidence 334688999987653 45563 6654
No 16
>2vpt_A Lipolytic enzyme; esterase, hydrolase; 1.40A {Clostridium thermocellum}
Probab=27.51 E-value=18 Score=32.87 Aligned_cols=26 Identities=12% Similarity=0.281 Sum_probs=16.6
Q ss_pred HHHHHHHHHHhhCCCCCCceEEEEecCCC
Q 009777 403 TIHSIVSWVNSQLPEHPRLKAFYRSISPR 431 (526)
Q Consensus 403 al~Twa~wV~~~ld~~~~t~VFfRT~SP~ 431 (526)
.++.+++.+.+.. ++++|++-++.|.
T Consensus 106 ~l~~li~~i~~~~---p~~~ii~~~~~p~ 131 (215)
T 2vpt_A 106 GLSNLIDQIFTVK---PNVTLFVADYYPW 131 (215)
T ss_dssp HHHHHHHHHHHHC---TTCEEEEECCCSC
T ss_pred HHHHHHHHHHHhC---CCCEEEEEeCCCC
Confidence 4556666665542 3567888887764
No 17
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9
Probab=24.36 E-value=25 Score=32.08 Aligned_cols=27 Identities=7% Similarity=0.148 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHhhCCCCCCceEEEEec
Q 009777 399 AKNFTIHSIVSWVNSQLPEHPRLKAFYRSI 428 (526)
Q Consensus 399 Ay~~al~Twa~wV~~~ld~~~~t~VFfRT~ 428 (526)
.|...|+.+++.+.+.. ++++|++-+.
T Consensus 111 ~f~~~l~~li~~l~~~~---P~~~iil~~p 137 (232)
T 3dc7_A 111 TFYGALMMLLTGLQTNW---PTVPKLFISA 137 (232)
T ss_dssp SHHHHHHHHHHHHHHHC---TTSCEEEEEC
T ss_pred HHHHHHHHHHHHHHHhC---CCCeEEEEeC
Confidence 45667777777776654 2456777443
No 18
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str}
Probab=24.19 E-value=22 Score=32.70 Aligned_cols=33 Identities=12% Similarity=0.057 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHhhCC--CCCCceEEEEecCCC
Q 009777 399 AKNFTIHSIVSWVNSQLP--EHPRLKAFYRSISPR 431 (526)
Q Consensus 399 Ay~~al~Twa~wV~~~ld--~~~~t~VFfRT~SP~ 431 (526)
.|...|+.+++.+.+... ..++++|++-+..|.
T Consensus 124 ~~~~~l~~li~~ir~~~~~~~~p~~~iil~~p~~~ 158 (232)
T 3dci_A 124 AAVSGMRRLAQIVETFIYKPREAVPKLLIVAPPPC 158 (232)
T ss_dssp HHHHHHHHHHHHHHHCCCSSTTCCCEEEEEECCCC
T ss_pred HHHHHHHHHHHHHHHhcccccCCCCeEEEEeCCCc
Confidence 466677777777755321 003567888875443
Done!