Query 009777
Match_columns 526
No_of_seqs 187 out of 768
Neff 5.2
Searched_HMMs 13730
Date Mon Mar 25 12:46:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009777.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/009777hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d3dc7a1 c.23.10.9 (A:18-224) U 65.1 1.1 7.7E-05 37.8 1.5 30 399-431 94-123 (207)
2 d1vjga_ c.23.10.6 (A:) Hypothe 61.4 1.1 8.1E-05 37.3 0.9 12 256-267 6-17 (201)
3 d3bzwa1 c.23.10.9 (A:38-285) U 45.6 3 0.00022 34.3 1.1 12 256-267 10-21 (248)
4 d1jrla_ c.23.10.5 (A:) Thioest 39.1 5.6 0.00041 33.0 1.8 12 256-267 3-14 (179)
5 d1fxwf_ c.23.10.3 (F:) Platele 32.2 8 0.00058 33.5 1.7 27 402-431 111-137 (212)
6 d1yzfa1 c.23.10.5 (A:1-195) Li 30.7 6.8 0.0005 32.8 0.9 11 256-266 3-13 (195)
7 d1es9a_ c.23.10.3 (A:) Platele 30.7 8.8 0.00064 33.1 1.7 27 401-430 110-136 (212)
8 d2hsja1 c.23.10.3 (A:1-211) Un 27.5 9.2 0.00067 32.8 1.3 30 401-433 105-134 (211)
9 d1pvva2 c.78.1.1 (A:151-313) O 26.3 12 0.00087 31.6 1.8 21 256-278 6-26 (163)
10 d1dxha2 c.78.1.1 (A:151-335) O 23.9 15 0.0011 31.6 2.0 22 256-278 7-28 (185)
11 d1k7ca_ c.23.10.4 (A:) Rhamnog 22.1 12 0.00088 31.4 0.9 28 470-497 159-201 (233)
No 1
>d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]}
Probab=65.10 E-value=1.1 Score=37.83 Aligned_cols=30 Identities=7% Similarity=0.074 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHHHhhCCCCCCceEEEEecCCC
Q 009777 399 AKNFTIHSIVSWVNSQLPEHPRLKAFYRSISPR 431 (526)
Q Consensus 399 Ay~~al~Twa~wV~~~ld~~~~t~VFfRT~SP~ 431 (526)
.+...++..++.+.+.. +++++++-+.-|.
T Consensus 94 ~~~~~~~~~i~~i~~~~---~~~~ii~~~~~~~ 123 (207)
T d3dc7a1 94 TFYGALMMLLTGLQTNW---PTVPKLFISAIHI 123 (207)
T ss_dssp SHHHHHHHHHHHHHHHC---TTSCEEEEECCCC
T ss_pred HHHHHHHHHHHHHHHhC---CceEEEEecCCCC
Confidence 35556677777776553 3456676665443
No 2
>d1vjga_ c.23.10.6 (A:) Hypothetical protein alr1529 {Nostoc sp. pcc 7120 [TaxId: 103690]}
Probab=61.41 E-value=1.1 Score=37.30 Aligned_cols=12 Identities=33% Similarity=0.686 Sum_probs=10.7
Q ss_pred ceEEEeechhhh
Q 009777 256 TLAFIGDSLGRQ 267 (526)
Q Consensus 256 rLaFVGDSL~RN 267 (526)
||+|||||++..
T Consensus 6 ri~~iGDS~t~G 17 (201)
T d1vjga_ 6 RICFVGDSFVNG 17 (201)
T ss_dssp EEEEEESHHHHT
T ss_pred EEEEEchhhccC
Confidence 899999999864
No 3
>d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=45.58 E-value=3 Score=34.34 Aligned_cols=12 Identities=33% Similarity=0.728 Sum_probs=10.5
Q ss_pred ceEEEeechhhh
Q 009777 256 TLAFIGDSLGRQ 267 (526)
Q Consensus 256 rLaFVGDSL~RN 267 (526)
||+|+|||++-.
T Consensus 10 kI~~~GDS~T~g 21 (248)
T d3bzwa1 10 KVGYIGDSITDP 21 (248)
T ss_dssp EEEEEESTTTCT
T ss_pred EEEEEehHHccC
Confidence 899999999853
No 4
>d1jrla_ c.23.10.5 (A:) Thioesterase I, TAP {Escherichia coli [TaxId: 562]}
Probab=39.06 E-value=5.6 Score=32.97 Aligned_cols=12 Identities=50% Similarity=0.706 Sum_probs=10.3
Q ss_pred ceEEEeechhhh
Q 009777 256 TLAFIGDSLGRQ 267 (526)
Q Consensus 256 rLaFVGDSL~RN 267 (526)
+|+|+||||+..
T Consensus 3 kIl~~GDSit~G 14 (179)
T d1jrla_ 3 TLLILGDSLSAG 14 (179)
T ss_dssp EEEEEESHHHHC
T ss_pred EEEEEeChhhhC
Confidence 689999999853
No 5
>d1fxwf_ c.23.10.3 (F:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha2 [TaxId: 9913]}
Probab=32.23 E-value=8 Score=33.48 Aligned_cols=27 Identities=30% Similarity=0.443 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEEEecCCC
Q 009777 402 FTIHSIVSWVNSQLPEHPRLKAFYRSISPR 431 (526)
Q Consensus 402 ~al~Twa~wV~~~ld~~~~t~VFfRT~SP~ 431 (526)
..++.+++.+.+.. +.++|++-++.|.
T Consensus 111 ~~~~~~i~~i~~~~---p~~~Ii~~~~~P~ 137 (212)
T d1fxwf_ 111 GGIEAIVQLINTRQ---PQAKIIVLGLLPR 137 (212)
T ss_dssp HHHHHHHHHHHHHC---TTCEEEEECCCCC
T ss_pred HHHHHHHHHHHHHh---ccccccceeeccc
Confidence 34666666665543 3567898888774
No 6
>d1yzfa1 c.23.10.5 (A:1-195) Lipase/acylhydrolase {Enterococcus faecalis [TaxId: 1351]}
Probab=30.74 E-value=6.8 Score=32.76 Aligned_cols=11 Identities=27% Similarity=0.625 Sum_probs=10.0
Q ss_pred ceEEEeechhh
Q 009777 256 TLAFIGDSLGR 266 (526)
Q Consensus 256 rLaFVGDSL~R 266 (526)
||+|+|||++.
T Consensus 3 ri~~~GDSit~ 13 (195)
T d1yzfa1 3 KIVLFGDSITA 13 (195)
T ss_dssp EEEEEESHHHH
T ss_pred EEEEEechhhc
Confidence 89999999975
No 7
>d1es9a_ c.23.10.3 (A:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha1 [TaxId: 9913]}
Probab=30.66 E-value=8.8 Score=33.12 Aligned_cols=27 Identities=26% Similarity=0.375 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEEEecCC
Q 009777 401 NFTIHSIVSWVNSQLPEHPRLKAFYRSISP 430 (526)
Q Consensus 401 ~~al~Twa~wV~~~ld~~~~t~VFfRT~SP 430 (526)
...++++++-+.... ++++|++-+..|
T Consensus 110 ~~~~~~ii~~l~~~~---p~~~Ii~~~~~p 136 (212)
T d1es9a_ 110 TGGIKAIVQLVNERQ---PQARVVVLGLLP 136 (212)
T ss_dssp HHHHHHHHHHHHHHS---TTCEEEEECCCC
T ss_pred HHHHHHHHHHHHHhh---ccccccceeeee
Confidence 344566666664442 356788888766
No 8
>d2hsja1 c.23.10.3 (A:1-211) Uncharacterized protein SP1450 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=27.48 E-value=9.2 Score=32.82 Aligned_cols=30 Identities=20% Similarity=0.141 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHhhCCCCCCceEEEEecCCCcc
Q 009777 401 NFTIHSIVSWVNSQLPEHPRLKAFYRSISPRHF 433 (526)
Q Consensus 401 ~~al~Twa~wV~~~ld~~~~t~VFfRT~SP~HF 433 (526)
...++..++-+.+.. ++++|++-++.|.-.
T Consensus 105 ~~~~~~li~~i~~~~---p~~~i~v~~~~P~~~ 134 (211)
T d2hsja1 105 LNNLEAIIQSVARDY---PLTEIKLLSILPVNE 134 (211)
T ss_dssp HHHHHHHHHHHHHHC---TTCEEEEECCCCCCC
T ss_pred HHhhhhhhhhhcccc---ccceEEEeeecCCCc
Confidence 334555555554433 356889988877543
No 9
>d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=26.31 E-value=12 Score=31.61 Aligned_cols=21 Identities=33% Similarity=0.529 Sum_probs=17.5
Q ss_pred ceEEEeechhhhHHHHHHHhhcC
Q 009777 256 TLAFIGDSLGRQQFQSLMCMVTG 278 (526)
Q Consensus 256 rLaFVGDSL~RNQweSLlCLLs~ 278 (526)
+|+|||| .+|-..||+=+|..
T Consensus 6 ~Ia~VGD--~~nv~~Sli~~l~~ 26 (163)
T d1pvva2 6 KVVYVGD--GNNVAHSLMIAGTK 26 (163)
T ss_dssp EEEEESC--CCHHHHHHHHHHHH
T ss_pred EEEEECC--CcHHHHHHHHHHHH
Confidence 8999999 67888999877743
No 10
>d1dxha2 c.78.1.1 (A:151-335) Ornithine transcarbamoylase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=23.87 E-value=15 Score=31.60 Aligned_cols=22 Identities=23% Similarity=0.362 Sum_probs=18.5
Q ss_pred ceEEEeechhhhHHHHHHHhhcC
Q 009777 256 TLAFIGDSLGRQQFQSLMCMVTG 278 (526)
Q Consensus 256 rLaFVGDSL~RNQweSLlCLLs~ 278 (526)
+|+||||.-+ |...||+-+++.
T Consensus 7 kia~vGD~~n-nV~~Sli~~~~~ 28 (185)
T d1dxha2 7 SYAYLGDARN-NMGNSLLLIGAK 28 (185)
T ss_dssp EEEEESCCSS-HHHHHHHHHHHH
T ss_pred EEEEEcCCcc-hHHHHHHHHHHH
Confidence 8999999656 799999988864
No 11
>d1k7ca_ c.23.10.4 (A:) Rhamnogalacturonan acetylesterase {Fungus (Aspergillus aculeatus) [TaxId: 5053]}
Probab=22.10 E-value=12 Score=31.39 Aligned_cols=28 Identities=18% Similarity=0.158 Sum_probs=19.5
Q ss_pred ccCCceEEeecccccc--------------cccCC-CCccccc
Q 009777 470 VKGTGVKLLDITALSQ--------------VRDEG-HISQYSI 497 (526)
Q Consensus 470 ~~~~~v~LLDIT~LS~--------------lR~DG-HPs~Y~~ 497 (526)
.+...+.++|+..++. +.+|| ||+..+.
T Consensus 159 a~~~~v~~iDl~~~~~~~~~~~~~~~~~~~~~~DgiHpn~~G~ 201 (233)
T d1k7ca_ 159 AEVAGVEYVDHWSYVDSIYETLGNATVNSYFPIDHTHTSPAGA 201 (233)
T ss_dssp HHHHTCEEECHHHHHHHHHHHHCHHHHHHTCSSSSSCCCHHHH
T ss_pred HHHcCCCeeeHHHHHHHHHHHcCchhhhhhcCCCCcCCCHHHH
Confidence 3345789999866542 56798 9998753
Done!