Query 009781
Match_columns 526
No_of_seqs 253 out of 2014
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 12:51:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009781.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009781hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1e5x_A Threonine synthase; thr 100.0 4.1E-83 1.4E-87 692.0 42.8 461 62-525 22-485 (486)
2 1kl7_A Threonine synthase; thr 100.0 6.8E-69 2.3E-73 581.9 31.4 414 76-522 1-512 (514)
3 4f4f_A Threonine synthase; str 100.0 4.7E-64 1.6E-68 538.0 30.2 399 78-519 3-466 (468)
4 3v7n_A Threonine synthase; ssg 100.0 3.6E-64 1.2E-68 539.4 27.9 399 80-518 4-484 (487)
5 3aey_A Threonine synthase; PLP 100.0 8.2E-61 2.8E-65 498.4 36.8 342 145-515 4-348 (351)
6 2zsj_A Threonine synthase; PLP 100.0 3E-60 1E-64 494.3 36.8 343 144-514 5-349 (352)
7 2d1f_A Threonine synthase; ami 100.0 3.7E-60 1.3E-64 495.2 35.8 342 144-514 13-356 (360)
8 1vb3_A Threonine synthase; PLP 100.0 1.4E-61 4.8E-66 516.5 25.4 395 81-517 1-426 (428)
9 3ss7_X D-serine dehydratase; t 100.0 7.3E-56 2.5E-60 474.1 25.7 372 90-486 14-438 (442)
10 1p5j_A L-serine dehydratase; l 100.0 4E-53 1.4E-57 443.8 35.1 315 145-484 28-351 (372)
11 4h27_A L-serine dehydratase/L- 100.0 1.3E-52 4.5E-57 438.6 35.1 317 144-485 27-352 (364)
12 2rkb_A Serine dehydratase-like 100.0 6.5E-51 2.2E-55 418.2 35.6 297 169-483 6-310 (318)
13 3iau_A Threonine deaminase; py 100.0 5E-51 1.7E-55 427.0 30.3 293 166-478 56-350 (366)
14 2gn0_A Threonine dehydratase c 100.0 5.9E-51 2E-55 422.8 27.5 295 167-482 37-333 (342)
15 3l6b_A Serine racemase; pyrido 100.0 1.6E-50 5.3E-55 420.3 27.9 299 168-483 23-323 (346)
16 4d9i_A Diaminopropionate ammon 100.0 5.3E-50 1.8E-54 423.7 32.4 306 169-486 43-389 (398)
17 1ve5_A Threonine deaminase; ri 100.0 1.3E-50 4.3E-55 414.7 26.3 287 166-477 16-308 (311)
18 1y7l_A O-acetylserine sulfhydr 100.0 1.1E-49 3.6E-54 408.8 31.8 295 164-482 7-309 (316)
19 1tdj_A Biosynthetic threonine 100.0 3.4E-50 1.2E-54 434.5 28.1 292 168-479 29-322 (514)
20 1v71_A Serine racemase, hypoth 100.0 3.5E-50 1.2E-54 413.7 25.3 291 168-481 24-316 (323)
21 2q3b_A Cysteine synthase A; py 100.0 3.7E-49 1.3E-53 404.3 27.7 291 164-483 10-307 (313)
22 1ve1_A O-acetylserine sulfhydr 100.0 4.1E-49 1.4E-53 402.3 27.6 285 167-481 6-298 (304)
23 3tbh_A O-acetyl serine sulfhyd 100.0 8.8E-49 3E-53 405.3 30.1 289 164-482 15-311 (334)
24 2egu_A Cysteine synthase; O-ac 100.0 2.8E-49 9.4E-54 404.3 24.8 289 164-482 8-302 (308)
25 1o58_A O-acetylserine sulfhydr 100.0 8.6E-49 2.9E-53 400.0 28.4 284 162-481 12-302 (303)
26 2v03_A Cysteine synthase B; py 100.0 1.2E-48 4.1E-53 399.0 29.0 281 164-482 4-290 (303)
27 1z7w_A Cysteine synthase; tran 100.0 1.3E-48 4.3E-53 402.0 28.7 293 163-483 8-307 (322)
28 2pqm_A Cysteine synthase; OASS 100.0 1.1E-48 3.6E-53 406.1 27.2 291 162-482 15-317 (343)
29 3dwg_A Cysteine synthase B; su 100.0 1.4E-48 4.7E-53 402.4 26.8 282 167-483 12-308 (325)
30 4aec_A Cysteine synthase, mito 100.0 3.1E-48 1.1E-52 411.6 28.9 294 162-483 115-415 (430)
31 3vc3_A Beta-cyanoalnine syntha 100.0 1.8E-47 6.3E-52 396.8 29.2 289 168-483 33-327 (344)
32 1jbq_A B, cystathionine beta-s 100.0 4.3E-45 1.5E-49 389.1 28.0 294 165-483 103-408 (435)
33 1tzj_A ACC deaminase, 1-aminoc 100.0 3.1E-46 1E-50 386.3 18.2 296 164-482 9-331 (338)
34 1wkv_A Cysteine synthase; homo 100.0 4.4E-45 1.5E-49 384.2 26.7 288 161-486 85-382 (389)
35 1x1q_A Tryptophan synthase bet 100.0 9.6E-45 3.3E-49 385.8 26.0 304 169-486 76-414 (418)
36 4d9b_A D-cysteine desulfhydras 100.0 2.2E-45 7.7E-50 380.9 20.2 288 162-475 24-332 (342)
37 1v8z_A Tryptophan synthase bet 100.0 1.8E-44 6E-49 379.9 24.2 301 170-486 50-385 (388)
38 1f2d_A 1-aminocyclopropane-1-c 100.0 3E-45 1E-49 379.7 15.5 290 164-477 9-328 (341)
39 3pc3_A CG1753, isoform A; CBS, 100.0 2E-43 6.7E-48 386.1 30.1 295 165-483 55-360 (527)
40 1qop_B Tryptophan synthase bet 100.0 8.2E-44 2.8E-48 376.1 23.7 299 170-486 55-390 (396)
41 2o2e_A Tryptophan synthase bet 100.0 1.2E-43 4.1E-48 377.5 25.1 302 169-486 80-416 (422)
42 1j0a_A 1-aminocyclopropane-1-c 100.0 1.6E-43 5.3E-48 364.5 19.4 281 164-476 15-312 (325)
43 1vp8_A Hypothetical protein AF 88.2 3.4 0.00012 38.5 10.5 115 197-320 22-148 (201)
44 2kdx_A HYPA, hydrogenase/ureas 77.9 0.71 2.4E-05 39.6 1.3 25 87-111 74-100 (119)
45 2xvc_A ESCRT-III, SSO0910; cel 73.9 3.4 0.00012 30.7 3.8 36 406-441 13-56 (59)
46 3a43_A HYPD, hydrogenase nicke 73.6 0.71 2.4E-05 40.9 0.1 24 88-111 72-117 (139)
47 1t57_A Conserved protein MTH16 73.3 11 0.00037 35.2 8.0 114 197-320 30-154 (206)
48 4ayb_P DNA-directed RNA polyme 66.2 3.2 0.00011 29.5 2.1 23 88-110 5-32 (48)
49 4ffl_A PYLC; amino acid, biosy 63.4 40 0.0014 33.5 10.8 110 229-338 6-137 (363)
50 4fn4_A Short chain dehydrogena 57.3 24 0.00082 34.0 7.5 68 224-295 8-82 (254)
51 2lcq_A Putative toxin VAPC6; P 57.0 3.4 0.00012 37.2 1.2 49 61-111 104-158 (165)
52 3h7a_A Short chain dehydrogena 53.3 66 0.0022 30.1 9.9 71 224-294 8-81 (252)
53 3r1i_A Short-chain type dehydr 50.6 45 0.0015 31.9 8.3 71 224-294 33-106 (276)
54 1vp8_A Hypothetical protein AF 49.4 1.6E+02 0.0056 27.2 14.4 44 312-368 32-75 (201)
55 4g81_D Putative hexonate dehyd 49.4 30 0.001 33.3 6.7 73 224-296 10-85 (255)
56 4gkb_A 3-oxoacyl-[acyl-carrier 49.1 42 0.0014 32.2 7.7 71 224-295 8-81 (258)
57 3ezl_A Acetoacetyl-COA reducta 48.8 35 0.0012 31.8 7.1 72 224-295 14-89 (256)
58 3u31_A SIR2A, transcriptional 47.6 6.9 0.00024 38.8 1.8 59 225-291 219-279 (290)
59 3ucx_A Short chain dehydrogena 47.1 54 0.0018 30.9 8.1 72 224-295 12-86 (264)
60 3qiv_A Short-chain dehydrogena 45.8 55 0.0019 30.4 7.9 71 224-294 10-83 (253)
61 3lyl_A 3-oxoacyl-(acyl-carrier 44.8 52 0.0018 30.4 7.5 71 225-295 7-80 (247)
62 3o26_A Salutaridine reductase; 44.8 1.2E+02 0.004 28.7 10.3 31 224-254 13-43 (311)
63 3uf0_A Short-chain dehydrogena 44.7 99 0.0034 29.3 9.7 57 224-281 32-88 (273)
64 3h0g_L DNA-directed RNA polyme 44.7 11 0.00038 28.6 2.1 31 78-112 17-49 (63)
65 3v2g_A 3-oxoacyl-[acyl-carrier 44.4 52 0.0018 31.3 7.6 71 224-294 32-106 (271)
66 3edm_A Short chain dehydrogena 44.0 49 0.0017 31.1 7.3 72 224-295 9-84 (259)
67 1yb1_A 17-beta-hydroxysteroid 43.2 66 0.0022 30.4 8.1 70 225-294 33-105 (272)
68 3awd_A GOX2181, putative polyo 42.7 57 0.0019 30.2 7.5 70 224-293 14-86 (260)
69 2ae2_A Protein (tropinone redu 42.0 85 0.0029 29.3 8.6 72 224-295 10-84 (260)
70 2q2v_A Beta-D-hydroxybutyrate 41.6 89 0.003 29.0 8.7 68 225-294 6-76 (255)
71 1sby_A Alcohol dehydrogenase; 41.6 1.4E+02 0.0046 27.6 10.0 54 225-280 7-63 (254)
72 1t57_A Conserved protein MTH16 41.3 2.2E+02 0.0076 26.4 12.7 46 447-492 148-194 (206)
73 1m2k_A Silent information regu 41.3 9.2 0.00032 36.8 1.6 29 81-112 119-153 (249)
74 2rhc_B Actinorhodin polyketide 41.3 73 0.0025 30.2 8.1 71 225-295 24-97 (277)
75 3u5t_A 3-oxoacyl-[acyl-carrier 41.2 66 0.0022 30.5 7.8 71 224-294 28-102 (267)
76 3ged_A Short-chain dehydrogena 41.2 84 0.0029 29.9 8.4 67 225-295 4-73 (247)
77 3gaf_A 7-alpha-hydroxysteroid 40.6 49 0.0017 31.1 6.6 71 224-294 13-86 (256)
78 3sju_A Keto reductase; short-c 40.3 58 0.002 31.0 7.2 71 224-294 25-98 (279)
79 2akl_A PHNA-like protein PA012 39.9 12 0.00042 32.4 1.9 26 86-111 27-54 (138)
80 3v8b_A Putative dehydrogenase, 39.8 55 0.0019 31.4 7.0 70 224-294 29-102 (283)
81 3oid_A Enoyl-[acyl-carrier-pro 39.5 55 0.0019 30.8 6.8 71 224-294 5-79 (258)
82 2jah_A Clavulanic acid dehydro 39.4 72 0.0024 29.7 7.6 66 224-293 8-80 (247)
83 1geg_A Acetoin reductase; SDR 39.0 82 0.0028 29.3 8.0 71 225-295 4-77 (256)
84 3rkr_A Short chain oxidoreduct 39.0 63 0.0022 30.3 7.2 69 225-293 31-102 (262)
85 2hq1_A Glucose/ribitol dehydro 38.5 76 0.0026 29.1 7.6 57 225-281 7-64 (247)
86 3zu3_A Putative reductase YPO4 38.3 1.4E+02 0.0048 30.7 10.0 96 196-296 21-136 (405)
87 3l9w_A Glutathione-regulated p 38.3 2.3E+02 0.008 28.9 11.9 51 226-281 7-57 (413)
88 3tjr_A Short chain dehydrogena 38.0 69 0.0024 30.9 7.5 71 224-294 32-105 (301)
89 3tfo_A Putative 3-oxoacyl-(acy 38.0 65 0.0022 30.6 7.1 70 225-294 6-78 (264)
90 4ibo_A Gluconate dehydrogenase 37.8 54 0.0019 31.2 6.5 72 224-295 27-101 (271)
91 3cxt_A Dehydrogenase with diff 37.3 74 0.0025 30.6 7.5 71 225-295 36-109 (291)
92 3afn_B Carbonyl reductase; alp 37.1 98 0.0034 28.4 8.1 69 225-293 9-81 (258)
93 4dmm_A 3-oxoacyl-[acyl-carrier 37.1 57 0.0019 31.0 6.5 70 225-294 30-103 (269)
94 3imf_A Short chain dehydrogena 37.1 40 0.0014 31.7 5.4 66 225-294 8-80 (257)
95 3ijr_A Oxidoreductase, short c 37.0 81 0.0028 30.2 7.7 70 225-294 49-122 (291)
96 3sc4_A Short chain dehydrogena 36.9 2.7E+02 0.0094 26.2 13.3 57 224-280 10-73 (285)
97 3qlj_A Short chain dehydrogena 36.3 91 0.0031 30.3 8.1 70 225-294 29-111 (322)
98 3i6i_A Putative leucoanthocyan 35.9 1.4E+02 0.0048 29.0 9.4 54 225-278 12-68 (346)
99 1kjq_A GART 2, phosphoribosylg 35.9 1.3E+02 0.0044 29.9 9.3 105 226-332 13-134 (391)
100 3bbn_B Ribosomal protein S2; s 35.8 95 0.0032 29.5 7.7 37 326-372 157-193 (231)
101 1zem_A Xylitol dehydrogenase; 35.8 79 0.0027 29.6 7.3 69 225-294 9-81 (262)
102 3ax6_A Phosphoribosylaminoimid 35.5 1.8E+02 0.0061 28.8 10.3 99 230-331 7-120 (380)
103 4da9_A Short-chain dehydrogena 35.3 67 0.0023 30.6 6.8 71 224-294 30-104 (280)
104 4e3z_A Putative oxidoreductase 35.3 74 0.0025 30.0 7.0 70 225-294 28-101 (272)
105 3a28_C L-2.3-butanediol dehydr 35.3 81 0.0028 29.4 7.2 68 225-294 4-78 (258)
106 3fwz_A Inner membrane protein 35.2 2E+02 0.0067 24.0 12.8 48 226-278 10-57 (140)
107 3uog_A Alcohol dehydrogenase; 35.2 97 0.0033 30.7 8.2 46 225-275 192-237 (363)
108 3ksu_A 3-oxoacyl-acyl carrier 35.2 1.3E+02 0.0045 28.1 8.8 71 224-295 12-89 (262)
109 3aw8_A PURK, phosphoribosylami 35.0 1.7E+02 0.0057 28.9 9.9 97 231-331 6-116 (369)
110 3is3_A 17BETA-hydroxysteroid d 35.0 79 0.0027 29.8 7.2 71 224-294 19-93 (270)
111 4eye_A Probable oxidoreductase 34.9 97 0.0033 30.5 8.1 48 224-275 161-208 (342)
112 3gem_A Short chain dehydrogena 34.7 1E+02 0.0036 28.9 8.0 68 225-295 29-97 (260)
113 1yuz_A Nigerythrin; rubrythrin 34.7 15 0.0005 34.3 1.8 21 89-110 174-195 (202)
114 3tzq_B Short-chain type dehydr 34.4 1.6E+02 0.0055 27.6 9.3 70 224-294 12-82 (271)
115 1fmc_A 7 alpha-hydroxysteroid 33.9 68 0.0023 29.5 6.4 68 225-292 13-83 (255)
116 4iin_A 3-ketoacyl-acyl carrier 33.7 43 0.0015 31.7 5.0 70 225-294 31-104 (271)
117 1ae1_A Tropinone reductase-I; 33.6 1.2E+02 0.004 28.6 8.2 71 224-295 22-96 (273)
118 3c85_A Putative glutathione-re 33.6 2.4E+02 0.0081 24.5 13.1 47 225-276 41-88 (183)
119 3svt_A Short-chain type dehydr 33.6 1E+02 0.0035 29.1 7.8 71 224-294 12-88 (281)
120 3osu_A 3-oxoacyl-[acyl-carrier 33.4 82 0.0028 29.2 6.9 70 225-294 6-79 (246)
121 3rih_A Short chain dehydrogena 33.1 83 0.0028 30.3 7.1 70 225-294 43-116 (293)
122 1ja9_A 4HNR, 1,3,6,8-tetrahydr 33.0 72 0.0025 29.7 6.5 70 225-294 23-96 (274)
123 2c07_A 3-oxoacyl-(acyl-carrier 32.7 97 0.0033 29.4 7.5 69 225-294 46-118 (285)
124 4iiu_A 3-oxoacyl-[acyl-carrier 32.7 86 0.003 29.4 7.0 70 225-294 28-101 (267)
125 2uvd_A 3-oxoacyl-(acyl-carrier 32.6 76 0.0026 29.4 6.5 70 225-294 6-79 (246)
126 3krt_A Crotonyl COA reductase; 32.5 1.4E+02 0.0048 30.7 9.1 48 225-276 231-278 (456)
127 3kvo_A Hydroxysteroid dehydrog 32.5 1.8E+02 0.0063 28.7 9.7 71 224-294 46-126 (346)
128 2dwc_A PH0318, 433AA long hypo 32.4 1.6E+02 0.0055 29.8 9.5 41 292-332 101-142 (433)
129 4a2c_A Galactitol-1-phosphate 32.3 2.6E+02 0.009 27.0 10.8 50 225-277 162-211 (346)
130 3gaz_A Alcohol dehydrogenase s 32.3 1.1E+02 0.0038 30.0 8.0 46 224-274 152-197 (343)
131 2gk4_A Conserved hypothetical 32.3 1.3E+02 0.0045 28.4 8.1 26 229-254 25-50 (232)
132 4imr_A 3-oxoacyl-(acyl-carrier 32.2 1.2E+02 0.0043 28.6 8.1 68 224-291 34-104 (275)
133 4ekn_B Aspartate carbamoyltran 32.2 1.4E+02 0.0047 29.5 8.5 46 233-278 163-210 (306)
134 2zat_A Dehydrogenase/reductase 32.0 84 0.0029 29.3 6.8 71 224-294 15-88 (260)
135 1gee_A Glucose 1-dehydrogenase 31.9 90 0.0031 28.9 7.0 70 225-294 9-82 (261)
136 1twf_L ABC10-alpha, DNA-direct 31.9 17 0.00059 28.1 1.4 26 80-109 26-53 (70)
137 1vl8_A Gluconate 5-dehydrogena 31.5 86 0.0029 29.6 6.8 67 224-294 22-96 (267)
138 3t7c_A Carveol dehydrogenase; 31.3 1.1E+02 0.0036 29.5 7.5 71 224-294 29-114 (299)
139 3pxx_A Carveol dehydrogenase; 31.1 1.1E+02 0.0036 28.9 7.4 71 224-294 11-96 (287)
140 3gk3_A Acetoacetyl-COA reducta 31.1 64 0.0022 30.4 5.8 70 225-294 27-100 (269)
141 3ek2_A Enoyl-(acyl-carrier-pro 30.8 94 0.0032 28.9 6.9 71 224-295 15-90 (271)
142 3s55_A Putative short-chain de 30.6 1.1E+02 0.0038 28.8 7.5 71 224-294 11-96 (281)
143 1yc5_A NAD-dependent deacetyla 30.5 10 0.00035 36.4 -0.1 29 81-112 119-156 (246)
144 3qwb_A Probable quinone oxidor 30.4 1.3E+02 0.0045 29.2 8.1 47 225-275 151-197 (334)
145 2apo_B Ribosome biogenesis pro 30.3 28 0.00096 26.1 2.3 24 88-115 8-32 (60)
146 1edo_A Beta-keto acyl carrier 30.1 1E+02 0.0034 28.1 6.9 70 225-294 3-76 (244)
147 3pk0_A Short-chain dehydrogena 30.1 82 0.0028 29.6 6.3 71 224-294 11-85 (262)
148 3oig_A Enoyl-[acyl-carrier-pro 30.0 1.1E+02 0.0038 28.5 7.3 70 224-294 8-84 (266)
149 1xg5_A ARPG836; short chain de 29.9 1.4E+02 0.0047 28.1 8.0 68 225-293 34-107 (279)
150 1wma_A Carbonyl reductase [NAD 29.9 78 0.0027 29.3 6.1 31 224-254 5-36 (276)
151 1uls_A Putative 3-oxoacyl-acyl 29.8 2.1E+02 0.0073 26.2 9.2 66 225-294 7-74 (245)
152 2ew8_A (S)-1-phenylethanol deh 29.8 1.7E+02 0.0057 27.0 8.4 68 225-294 9-79 (249)
153 3e03_A Short chain dehydrogena 29.7 2E+02 0.0067 27.0 9.1 71 224-294 7-87 (274)
154 3pwf_A Rubrerythrin; non heme 29.6 21 0.00072 32.3 1.9 21 89-110 141-162 (170)
155 1q1a_A HST2 protein; ternary c 29.5 12 0.00039 37.0 0.1 29 81-112 134-174 (289)
156 1ma3_A SIR2-AF2, transcription 29.5 19 0.00066 34.6 1.7 29 81-112 121-159 (253)
157 2hcy_A Alcohol dehydrogenase 1 29.4 2.5E+02 0.0085 27.4 10.0 49 223-275 170-218 (347)
158 3gqv_A Enoyl reductase; medium 29.3 1E+02 0.0035 30.7 7.2 46 225-275 167-212 (371)
159 1wfh_A Zinc finger (AN1-like) 29.3 29 0.001 26.3 2.3 27 87-115 16-42 (64)
160 2b4q_A Rhamnolipids biosynthes 29.3 1.1E+02 0.0038 29.0 7.2 65 225-294 31-102 (276)
161 3tox_A Short chain dehydrogena 29.0 66 0.0023 30.8 5.5 66 225-294 10-82 (280)
162 3tpc_A Short chain alcohol deh 28.9 1.5E+02 0.0051 27.5 7.9 68 224-294 8-78 (257)
163 1uc8_A LYSX, lysine biosynthes 28.8 2.5E+02 0.0084 25.9 9.5 102 227-332 4-109 (280)
164 3sx2_A Putative 3-ketoacyl-(ac 28.6 1.1E+02 0.0036 28.9 6.9 71 224-294 14-99 (278)
165 3nrc_A Enoyl-[acyl-carrier-pro 28.6 1.4E+02 0.005 28.1 7.9 69 225-295 28-101 (280)
166 3pgx_A Carveol dehydrogenase; 28.5 1.3E+02 0.0044 28.4 7.5 71 224-294 16-102 (280)
167 3kkj_A Amine oxidase, flavin-c 28.5 52 0.0018 29.1 4.4 28 226-254 5-32 (336)
168 2r6j_A Eugenol synthase 1; phe 28.5 1.7E+02 0.0057 27.9 8.4 54 225-278 13-66 (318)
169 4g81_D Putative hexonate dehyd 28.5 2.1E+02 0.0071 27.2 8.9 68 264-336 26-96 (255)
170 3h4t_A Glycosyltransferase GTF 28.5 4.2E+02 0.014 26.2 11.8 49 229-282 8-58 (404)
171 1v3u_A Leukotriene B4 12- hydr 28.4 1.6E+02 0.0056 28.5 8.4 48 223-274 146-193 (333)
172 3qiv_A Short-chain dehydrogena 28.1 2E+02 0.0068 26.4 8.6 70 262-336 24-96 (253)
173 2o23_A HADH2 protein; HSD17B10 28.1 2E+02 0.007 26.3 8.7 67 224-293 13-82 (265)
174 3uve_A Carveol dehydrogenase ( 28.0 1.3E+02 0.0044 28.4 7.4 71 224-294 12-101 (286)
175 1w6u_A 2,4-dienoyl-COA reducta 27.8 1.3E+02 0.0043 28.6 7.3 69 225-294 28-101 (302)
176 3glr_A NAD-dependent deacetyla 27.6 20 0.00067 35.4 1.3 29 81-112 137-174 (285)
177 1iy8_A Levodione reductase; ox 27.6 1.1E+02 0.0038 28.6 6.8 66 225-294 15-89 (267)
178 3ew7_A LMO0794 protein; Q8Y8U8 27.5 1.7E+02 0.0057 25.9 7.7 30 226-255 3-32 (221)
179 4e6p_A Probable sorbitol dehyd 27.5 1.6E+02 0.0054 27.4 7.8 68 224-295 9-80 (259)
180 3ai3_A NADPH-sorbose reductase 27.3 1.2E+02 0.004 28.3 6.9 66 225-294 9-82 (263)
181 3grk_A Enoyl-(acyl-carrier-pro 27.3 1.1E+02 0.0038 29.3 6.8 71 224-295 32-107 (293)
182 2bd0_A Sepiapterin reductase; 27.2 1.7E+02 0.0057 26.6 7.8 66 225-294 4-83 (244)
183 1wg2_A Zinc finger (AN1-like) 27.1 34 0.0012 25.9 2.3 27 87-115 16-42 (64)
184 3tsc_A Putative oxidoreductase 26.9 1.4E+02 0.005 28.0 7.5 71 224-294 12-98 (277)
185 4fn4_A Short chain dehydrogena 26.9 2E+02 0.0069 27.3 8.5 66 265-335 25-93 (254)
186 3rkr_A Short chain oxidoreduct 26.9 2.1E+02 0.0071 26.5 8.6 83 249-336 30-116 (262)
187 3ctm_A Carbonyl reductase; alc 26.8 1.1E+02 0.0037 28.8 6.5 67 225-292 36-106 (279)
188 1yxm_A Pecra, peroxisomal tran 26.8 1.4E+02 0.0049 28.3 7.5 69 225-294 20-97 (303)
189 3r3s_A Oxidoreductase; structu 26.8 1.2E+02 0.0042 28.9 7.1 70 225-294 51-125 (294)
190 3p19_A BFPVVD8, putative blue 26.7 1.4E+02 0.0049 28.0 7.4 67 224-294 17-84 (266)
191 4b7c_A Probable oxidoreductase 26.6 1.6E+02 0.0054 28.6 8.0 49 223-275 150-199 (336)
192 2qq5_A DHRS1, dehydrogenase/re 26.5 1.3E+02 0.0044 28.0 7.0 30 225-254 7-36 (260)
193 3iz6_A 40S ribosomal protein S 26.3 73 0.0025 31.6 5.1 84 270-372 74-158 (305)
194 1q14_A HST2 protein; histone d 26.2 16 0.00053 37.4 0.3 29 81-112 142-182 (361)
195 2et6_A (3R)-hydroxyacyl-COA de 26.1 2E+02 0.007 30.9 9.3 69 225-295 324-393 (604)
196 3ftp_A 3-oxoacyl-[acyl-carrier 26.1 73 0.0025 30.2 5.2 69 225-294 30-102 (270)
197 1wfp_A Zinc finger (AN1-like) 25.8 35 0.0012 26.6 2.2 27 87-115 26-52 (74)
198 3l77_A Short-chain alcohol deh 25.7 80 0.0027 28.8 5.2 68 225-293 4-76 (235)
199 3jyn_A Quinone oxidoreductase; 25.5 1.3E+02 0.0043 29.2 7.0 47 225-275 143-189 (325)
200 3ak4_A NADH-dependent quinucli 25.4 2.8E+02 0.0094 25.6 9.2 66 225-294 14-83 (263)
201 4fgs_A Probable dehydrogenase 25.2 1.5E+02 0.005 28.7 7.2 69 224-296 30-102 (273)
202 3f1l_A Uncharacterized oxidore 25.1 1.8E+02 0.0062 26.9 7.7 68 224-295 13-90 (252)
203 2z1n_A Dehydrogenase; reductas 25.0 1.6E+02 0.0054 27.3 7.3 68 225-296 9-85 (260)
204 4egf_A L-xylulose reductase; s 25.0 80 0.0027 29.7 5.2 69 225-294 22-95 (266)
205 3v2h_A D-beta-hydroxybutyrate 24.6 2.1E+02 0.0072 27.0 8.3 71 225-295 27-102 (281)
206 2cfc_A 2-(R)-hydroxypropyl-COM 24.6 1.1E+02 0.0037 28.0 6.0 65 225-293 4-76 (250)
207 3n74_A 3-ketoacyl-(acyl-carrie 24.3 1.6E+02 0.0053 27.3 7.1 67 224-294 10-80 (261)
208 1ml4_A Aspartate transcarbamoy 24.2 3.4E+02 0.012 26.7 9.7 46 233-278 167-213 (308)
209 3csu_A Protein (aspartate carb 24.1 1.5E+02 0.0053 29.2 7.2 45 233-277 166-212 (310)
210 2pd4_A Enoyl-[acyl-carrier-pro 23.9 3.5E+02 0.012 25.2 9.6 70 225-295 8-82 (275)
211 3op4_A 3-oxoacyl-[acyl-carrier 23.9 1.2E+02 0.004 28.2 6.1 67 224-294 10-80 (248)
212 4ibo_A Gluconate dehydrogenase 23.9 3E+02 0.01 25.8 9.1 85 249-336 27-113 (271)
213 3l6e_A Oxidoreductase, short-c 23.9 1.5E+02 0.0051 27.2 6.8 66 225-294 5-74 (235)
214 1xq1_A Putative tropinone redu 23.8 1.5E+02 0.0051 27.4 6.9 68 225-292 16-86 (266)
215 4fk1_A Putative thioredoxin re 23.6 74 0.0025 30.4 4.7 31 222-253 5-35 (304)
216 1xhl_A Short-chain dehydrogena 23.5 1.2E+02 0.0041 29.1 6.3 70 225-294 28-103 (297)
217 3ioy_A Short-chain dehydrogena 23.2 1.6E+02 0.0054 28.6 7.1 70 225-295 10-85 (319)
218 4fc7_A Peroxisomal 2,4-dienoyl 23.2 1.4E+02 0.0048 28.2 6.6 70 225-294 29-102 (277)
219 3oec_A Carveol dehydrogenase ( 23.1 1.4E+02 0.0048 28.9 6.8 70 225-294 48-132 (317)
220 3llv_A Exopolyphosphatase-rela 23.0 2.4E+02 0.0083 23.2 7.5 47 226-277 9-55 (141)
221 1g0o_A Trihydroxynaphthalene r 22.9 1.6E+02 0.0053 27.8 6.9 70 225-294 31-104 (283)
222 3tfo_A Putative 3-oxoacyl-(acy 22.9 2.7E+02 0.0092 26.1 8.6 83 249-336 5-91 (264)
223 1xkq_A Short-chain reductase f 22.8 1.3E+02 0.0043 28.5 6.2 66 225-294 8-83 (280)
224 3gms_A Putative NADPH:quinone 22.8 1.4E+02 0.0048 29.1 6.7 47 225-275 147-193 (340)
225 2pnf_A 3-oxoacyl-[acyl-carrier 22.7 1.4E+02 0.0049 27.1 6.4 66 225-294 9-82 (248)
226 3nyw_A Putative oxidoreductase 22.7 2.1E+02 0.0071 26.5 7.7 31 224-254 8-38 (250)
227 1e8j_A Rubredoxin; iron-sulfur 22.7 34 0.0012 24.7 1.5 10 89-98 6-15 (52)
228 4e4t_A Phosphoribosylaminoimid 22.6 3.6E+02 0.012 27.3 10.0 32 225-256 36-67 (419)
229 1wfl_A Zinc finger protein 216 22.3 40 0.0014 26.3 1.9 27 87-115 26-52 (74)
230 3lf2_A Short chain oxidoreduct 22.3 2E+02 0.0068 26.8 7.5 67 224-294 9-84 (265)
231 3sju_A Keto reductase; short-c 22.3 2.7E+02 0.0092 26.2 8.5 83 249-336 25-111 (279)
232 3icc_A Putative 3-oxoacyl-(acy 22.3 2.4E+02 0.008 25.8 7.9 67 225-291 9-79 (255)
233 1x1t_A D(-)-3-hydroxybutyrate 22.2 1.5E+02 0.0051 27.5 6.5 69 225-294 6-80 (260)
234 1s5p_A NAD-dependent deacetyla 22.0 28 0.00094 33.1 1.2 33 225-257 170-204 (235)
235 4dqx_A Probable oxidoreductase 22.0 1.8E+02 0.0061 27.5 7.1 66 225-294 29-98 (277)
236 1u7z_A Coenzyme A biosynthesis 21.9 3.3E+02 0.011 25.5 8.7 23 232-254 33-55 (226)
237 3gvc_A Oxidoreductase, probabl 21.8 1.5E+02 0.0052 28.0 6.6 67 224-294 30-100 (277)
238 1pvv_A Otcase, ornithine carba 21.6 2.3E+02 0.0079 28.0 7.9 54 225-278 157-215 (315)
239 1h5q_A NADP-dependent mannitol 21.6 2.5E+02 0.0086 25.6 8.0 71 224-295 15-90 (265)
240 3v8b_A Putative dehydrogenase, 21.6 2.5E+02 0.0086 26.5 8.1 83 249-336 29-115 (283)
241 2x9g_A PTR1, pteridine reducta 21.4 1.6E+02 0.0054 27.9 6.6 69 225-293 25-102 (288)
242 3s8m_A Enoyl-ACP reductase; ro 21.3 2.2E+02 0.0075 29.4 8.0 72 224-295 62-149 (422)
243 1wff_A Riken cDNA 2810002D23 p 21.2 50 0.0017 26.5 2.3 29 86-115 25-53 (85)
244 3pi7_A NADH oxidoreductase; gr 21.2 98 0.0034 30.4 5.2 47 225-275 167-213 (349)
245 3two_A Mannitol dehydrogenase; 21.1 2.8E+02 0.0097 26.9 8.6 47 225-276 179-225 (348)
246 1sny_A Sniffer CG10964-PA; alp 21.1 1.4E+02 0.0048 27.6 6.0 66 225-291 23-94 (267)
247 1kol_A Formaldehyde dehydrogen 21.0 5E+02 0.017 25.7 10.6 47 225-275 188-234 (398)
248 1zsy_A Mitochondrial 2-enoyl t 21.0 1.6E+02 0.0056 28.9 6.8 51 225-275 170-220 (357)
249 2ph3_A 3-oxoacyl-[acyl carrier 21.0 1.3E+02 0.0045 27.3 5.7 69 225-293 3-76 (245)
250 2bgk_A Rhizome secoisolaricire 21.0 2.6E+02 0.0088 25.8 8.0 31 224-254 17-47 (278)
251 4dyv_A Short-chain dehydrogena 20.9 1.7E+02 0.0059 27.6 6.7 66 225-294 30-99 (272)
252 2c0c_A Zinc binding alcohol de 20.7 2.1E+02 0.0073 28.2 7.6 47 225-275 166-212 (362)
253 4fs3_A Enoyl-[acyl-carrier-pro 20.6 2.7E+02 0.0092 25.9 8.0 71 224-295 7-84 (256)
254 3lyl_A 3-oxoacyl-(acyl-carrier 20.6 3.2E+02 0.011 24.8 8.4 68 264-336 22-92 (247)
255 1yb5_A Quinone oxidoreductase; 20.6 3.9E+02 0.013 26.1 9.5 49 223-275 171-219 (351)
256 3tox_A Short chain dehydrogena 20.5 3.2E+02 0.011 25.8 8.6 83 249-336 9-95 (280)
257 6rxn_A Rubredoxin; electron tr 20.5 32 0.0011 24.3 0.9 9 89-97 7-15 (46)
258 3rwb_A TPLDH, pyridoxal 4-dehy 20.4 1.8E+02 0.0063 26.8 6.7 67 224-294 7-77 (247)
259 2gmg_A Hypothetical protein PF 20.2 41 0.0014 28.0 1.7 25 87-111 68-94 (105)
260 2v3b_B Rubredoxin 2, rubredoxi 20.2 34 0.0012 25.0 1.1 11 89-99 6-16 (55)
261 1pqw_A Polyketide synthase; ro 20.2 2.9E+02 0.01 24.1 7.8 46 225-274 41-86 (198)
262 3r6d_A NAD-dependent epimerase 20.2 1.6E+02 0.0056 26.3 6.1 55 225-283 7-63 (221)
263 3zv4_A CIS-2,3-dihydrobiphenyl 20.2 1.8E+02 0.0062 27.4 6.7 67 224-294 6-76 (281)
264 3dii_A Short-chain dehydrogena 20.0 3.3E+02 0.011 24.9 8.4 66 225-294 4-72 (247)
No 1
>1e5x_A Threonine synthase; threonine biosynthesis, PLP enzyme, S-adenosyl-methionine, allostery; 2.25A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 2c2b_A* 2c2g_A*
Probab=100.00 E-value=4.1e-83 Score=691.96 Aligned_cols=461 Identities=83% Similarity=1.316 Sum_probs=389.8
Q ss_pred ccchhHHHhcCCCCCCC--cceeeccCCCCC-CCCCcccCCCceeeCCCCCcceecccccccccCChHHHHHhhhhhccc
Q 009781 62 INIRDEARRRNVIYTHK--FSAKYVPFNAGP-SCTESYSLDEVVYRSQSGGLLDVQHDMGALKHYDGAYWKALFDSRVGK 138 (526)
Q Consensus 62 ~~~~~~~~~~~~~~~~~--~~~~y~s~~~t~-~cg~~~~~~~~~~~c~cGGll~v~~d~~~i~~~~~~~~~~~~~~~~~~ 138 (526)
.|||+||+|..+...+. ..|||+| || +||.+|+|++++++|+|||||++.||++.+|.++++.|+.++.+++..
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~m~c~~---~~~~~~~~~~~~~~~~~~~~ggl~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 98 (486)
T 1e5x_A 22 DNIRDEARRNRSNAVNPFSAKYVPFN---AAPGSTESYSLDEIVYRSRSGGLLDVEHDMEALKRFDGAYWRDLFDSRVGK 98 (486)
T ss_dssp HHHCCC------CCCCCCCEEEEESS---CSSCCCBCTTSCCCBCC----CBEEEEECHHHHHTSCHHHHHHHHHTTTTC
T ss_pred ccHHHHhhhccccccccCCceEEecc---CCCCCCcccChHHheecCCCCCEEEEEecccccCcCCHHHHHHHHHhhhhh
Confidence 89999998855553333 4699999 85 799999999999999999999999999889999888898888888877
Q ss_pred ccCCCCCCccccccccCCCCCccchhcccccCCCceecccccccccCCCcEEEEecCCCCCCchhhhhHHHHHHHHHHHH
Q 009781 139 TTWPYGSGVWSKKEWVLPEIDSDDIVSAFEGNSNLFWAERFGKEFLQMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLK 218 (526)
Q Consensus 139 ~~~~~~~~iwr~~~~~lP~~~~~~~vsl~eG~TPL~~~~~l~~~~lg~~~l~lK~E~~nPTGSFKDRga~~~v~~a~~~~ 218 (526)
.+++|.++||||++++.|.++.++++++++|.|||++++++++..+|..+||+|+|++||||||||||+.++++.+.++.
T Consensus 99 ~~~~~~~~i~~y~e~l~p~~~~~~iv~l~~g~TPLv~l~~L~~~~lg~~~l~~K~E~~nPTGSFKDRga~~~~~~l~~~~ 178 (486)
T 1e5x_A 99 STWPYGSGVWSKKEWVLPEIDDDDIVSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLR 178 (486)
T ss_dssp CCTTTTSTTGGGGGGTCTTCCGGGCCCCCCCCCCEEECHHHHHHHHCCSSEEEEETTSSTTSBTTHHHHHHHHHHHHHHH
T ss_pred hcccccccceeHHhhcCCcccccccccccCCCCCcEECcccchhhcCCCcEEEeeccCCCccCHHHHHHHHHHHHHHHHH
Confidence 88899889999999643877667889999999999999887653135558999999999999999999999999987764
Q ss_pred hcCCCceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCCee
Q 009781 219 RMNKPVIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDTDFDGCMQLIREVTSELPIY 298 (526)
Q Consensus 219 ~~g~~~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~~~ 298 (526)
+.+++..+|+++||||||+|+|++|++.|++|+||||+++++..|+.||+.+||+|+.++++||+|++.+++++++.++|
T Consensus 179 ~~~~g~~~Vv~aSsGNtG~AlA~~a~~~Gi~~~I~~P~~~~s~~k~~~~~~~GA~vi~v~g~~dd~~~~a~~l~~~~~~~ 258 (486)
T 1e5x_A 179 KMKRPVVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISMAQLVQPIANGAFVLSIDTDFDGCMKLIREITAELPIY 258 (486)
T ss_dssp HTTCCCCEEEECCCSHHHHHHHHHHHHHTCCEEEEEEGGGCCHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSCEE
T ss_pred HcCCCCeEEEEcCCCHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHhcCCEE
Confidence 45544678999999999999999999999999999999668999999999999999999999999999999999888999
Q ss_pred eccCCchhHHhHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCchHHHHHH
Q 009781 299 LANSLNSLRLEGQKTAAIEILQQFDWEVPDWVIVPGGNLGNIYAFYKGFQMCKELGLVDRIPRLVCAQAANANPLYLYYK 378 (526)
Q Consensus 299 ~~ns~Np~~i~G~~T~a~EI~eQl~~~~pd~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prvi~Vq~~~~~~l~~a~~ 378 (526)
++|++||++++||+|+++||++|++|..||+||||+|+||+++|+++||+++++||++++.+|||+||++++++++++|+
T Consensus 259 ~vns~N~~~i~gq~t~~~Ei~~ql~~~~~D~vvvpvG~GG~i~Gi~~a~k~~~~~Gli~p~~rvi~Ve~~~~~~l~~~~~ 338 (486)
T 1e5x_A 259 LANSLNSLRLEGQKTAAIEILQQFDWQVPDWVIVPGGNLGNIYAFYKGFKXCQELGLVDRIPRMVCAQAANANPLYLHYK 338 (486)
T ss_dssp EGGGSHHHHHHHHTHHHHHHHHHTTSCCCSEEEEECSSTHHHHHHHHHHHHHHHTTSSSCCCEEEEEEETTSSTHHHHHH
T ss_pred EeCCCCHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCcHHHHHHHHHHHHHhhhhccCCCCCEEEEEecCCCchHHHHHH
Confidence 99999999999999999999999987679999999999999999999999999999988899999999999999999999
Q ss_pred hCCccccccCCccccccccccCCCccHHHHHHHHHhCCCeEEEeCHHHHHHHHHHHHhcCCeecchHHHHHHHHHHHHHc
Q 009781 379 SGWKDFKPVRANTTFASAIQIGDPVSIDRAVYALKNCDGIVEEATEEELMDVSAQADSTGMFVCPHTGVALSALIKLRCK 458 (526)
Q Consensus 379 ~G~~~~~~~~~~~Tia~~i~i~~P~~~~~~l~~l~~~~g~~v~Vsd~ei~~A~~~l~~~Gi~veP~sA~alAal~~l~~~ 458 (526)
+|...+.+....+|++++|+++.|.++++.++.+++++|.++.|+|+|++++++.++++|+++||+||+++||+++++++
T Consensus 339 ~G~~~~~~~~~~~t~a~gi~i~~p~~~~~~~~~~~~~~g~~~~Vsd~e~~~ai~l~~~eGi~~ePssA~alaa~~~~~~~ 418 (486)
T 1e5x_A 339 SGWKDFKPMTASTTFASAIQIGDPVSIDRAVYALKKCNGIVEEATEEELMDAMAQADSTGMFICPHTGVALTALFKLRNQ 418 (486)
T ss_dssp TTTTTCCC----------------CCCHHHHHHHHHTTCEEEEECHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHT
T ss_pred cCCCccccCCCCCeeCccccCCCCccHHHHHHHHhccCCeEEEECHHHHHHHHHHHHHCCeEEChhHHHHHHHHHHHHHh
Confidence 99644555556689999999999999999998899999989999999999999966889999999999999999999988
Q ss_pred CCCCCCCeEEEEECCCCCCchHHHHhhhcchhhHHHhhhcCCCcccCCCHHHHHHHHHHHHhhcCCC
Q 009781 459 GVIGKTDKTVVVSTAHGLKFTQSKIDYHSQNIKDMACRLANPPVSVKADFGSVMDVLKKYLLSKEPK 525 (526)
Q Consensus 459 g~i~~~~~vVvv~TG~g~K~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~v~~~~~~~~~~~~~~ 525 (526)
+.+.++++||+++|||+.||++.+.+++..++|.+......++..+++|+++|+++|.+.+.+.+.+
T Consensus 419 g~~~~~~~vV~i~Tg~~~k~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 485 (486)
T 1e5x_A 419 GVIAPTDRTVVVSTAHGLKFTQSKIDYHSNAIPDMACRFSNPPVDVKADFGAVMDVLKSYLGSNTLT 485 (486)
T ss_dssp TSSCTTCCEEEEECBCGGGGHHHHHHHHTTCCSSCCCTTCCCCEEEESCHHHHHHHHHHHTTCCSSC
T ss_pred cCCCCCCeEEEEeCCCCccCHHHHHHHhcCCCcchhhhhhccceecCCCHHHHHHHHHHHhhhcccC
Confidence 8778889999999999999999999998877777433344566789999999999999998877654
No 2
>1kl7_A Threonine synthase; threonine synthesis, pyridoxal 5-phosphate, beta-family, MON lyase; HET: PLP; 2.70A {Saccharomyces cerevisiae} SCOP: c.79.1.1
Probab=100.00 E-value=6.8e-69 Score=581.91 Aligned_cols=414 Identities=24% Similarity=0.306 Sum_probs=337.1
Q ss_pred CCCcceeeccCCCCCCCC-CcccCCCcee-eC-CCCCcceecccccccccCChHH----HHHh-hhhhcccccCCCCCCc
Q 009781 76 THKFSAKYVPFNAGPSCT-ESYSLDEVVY-RS-QSGGLLDVQHDMGALKHYDGAY----WKAL-FDSRVGKTTWPYGSGV 147 (526)
Q Consensus 76 ~~~~~~~y~s~~~t~~cg-~~~~~~~~~~-~c-~cGGll~v~~d~~~i~~~~~~~----~~~~-~~~~~~~~~~~~~~~i 147 (526)
+|+.+|+|+| ||+|+ .+|+|+++++ .| +|||||++. .+|.++.+. |+.+ |.+++..+ |
T Consensus 1 ~~~~~M~y~s---tr~~~~~~~~~~~a~l~g~a~dGGl~~p~----~~p~~~~~~~~~~~~~~s~~~~a~~~-------l 66 (514)
T 1kl7_A 1 MPNASQVYRS---TRSSSPKTISFEEAIIQGLATDGGLFIPP----TIPQVDQATLFNDWSKLSFQDLAFAI-------M 66 (514)
T ss_dssp -CCTTSCBEE---TTCCSSCCBCHHHHHHHCSCTTSCCEECS----SCCCCCHHHHHHTTTTCCHHHHHHHH-------H
T ss_pred CCCcCeEEEe---cCCCCCCccCHHHHHHhCCcCCCCeeecc----ccCCCChHHHHHHhhcCCHHHHHHHH-------H
Confidence 3678899999 99999 9999988854 57 799999743 466666543 5555 66665444 5
Q ss_pred cccc--cccCCCCCccchhc-----cc-ccCCCcee--cccccccccCCCcEEEEecCCCCCCchhhhhHHHHHHHHHHH
Q 009781 148 WSKK--EWVLPEIDSDDIVS-----AF-EGNSNLFW--AERFGKEFLQMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRL 217 (526)
Q Consensus 148 wr~~--~~~lP~~~~~~~vs-----l~-eG~TPL~~--~~~l~~~~lg~~~l~lK~E~~nPTGSFKDRga~~~v~~a~~~ 217 (526)
|+|. + .+|..+.+.+++ +. +|.|||++ ++++ .++|+|+|++|||||||||++.++++.+.+.
T Consensus 67 ~~f~~~~-~ip~~~l~~~v~~ay~~f~~~g~TPLv~~~l~~l-------~~l~~K~e~~nPTgSFKDrga~~~~~~~~~a 138 (514)
T 1kl7_A 67 RLYIAQE-EIPDADLKDLIKRSYSTFRSDEVTPLVQNVTGDK-------ENLHILELFHGPTYAFKDVALQFVGNLFEYF 138 (514)
T ss_dssp HTTSCTT-TSCHHHHHHHHHHHTTTCSSTTSSCEECCTTCSS-------SCEEEEECCCSTTSBTHHHHHHHHHHHHHHH
T ss_pred HHHhCcc-cCCHHHHHHHHHHHhhccCCCCCCceeehhcccc-------cchhhhhhccCCCCcHHHHHHHHHHHHHHHH
Confidence 6665 5 367543345666 64 89999998 6543 3799999999999999999999998877653
Q ss_pred -HhcCC-------CceEEEEeccchHHHHHHHHH--HhcCCCEEEEcCCCcCCHHhHHhHH---hCCCEEEEECCCHHHH
Q 009781 218 -KRMNK-------PVIGVGCASTGDTSAALSAYC--ASAGVPSIVFLPANKISIAQLVQPI---ANGAFVLSLDTDFDGC 284 (526)
Q Consensus 218 -~~~g~-------~~~~Vv~aSSGN~g~AlAa~a--a~~Gi~~~V~vP~~~~s~~k~~q~~---~~GA~Vi~v~g~~dd~ 284 (526)
.+.|. +..+|+++||||||+| |++| ++.|++|+||||++++++.|+.||. .+|++|+.++|+||||
T Consensus 139 ~~~~g~~~~~~~~~~~~Iv~ATSGNtG~A-A~~a~a~~~Gi~~~I~~P~~~~S~~q~~qm~~~~g~~~~vv~v~g~fdda 217 (514)
T 1kl7_A 139 LQRTNANLPEGEKKQITVVGATSGDTGSA-AIYGLRGKKDVSVFILYPTGRISPIQEEQMTTVPDENVQTLSVTGTFDNC 217 (514)
T ss_dssp HHHHHTTSCSSSCCCEEEEEECSSSHHHH-HHHHHTTCTTEEEEEEEETTSSCHHHHHHHHHCCCTTEEEEEESSCHHHH
T ss_pred HHhcCCccccccCCCCEEEECCCCcHHHH-HHHHHHhhcCCeEEEEEcCCCCCHHHHHHHhhhcCCCEEEEEcCCCHHHH
Confidence 22331 2478999999999988 5555 9999999999999878999999994 5788999999999999
Q ss_pred HHHHHHHHhcC------CeeeccCCchhHHhHHHHHHHHHHHHc-CC--CCCcEEEEeCCchhHHHHHHHHHHHHHHcCC
Q 009781 285 MQLIREVTSEL------PIYLANSLNSLRLEGQKTAAIEILQQF-DW--EVPDWVIVPGGNLGNIYAFYKGFQMCKELGL 355 (526)
Q Consensus 285 ~~~~~~~~~~~------~~~~~ns~Np~~i~G~~T~a~EI~eQl-~~--~~pd~VvVP~G~Gg~l~G~~kgf~~l~~~Gl 355 (526)
++.+++++++. +++++|++||.|++||+|+++|+++|+ +| ..||+||||+||||+++|++ .++++|+
T Consensus 218 ~~~vk~l~~~~~~~~~~~~~~~Ns~N~~ri~gQ~tyy~e~~~ql~~~~~~~~d~~vvP~GngG~i~a~~----~ak~~G~ 293 (514)
T 1kl7_A 218 QDIVKAIFGDKEFNSKHNVGAVNSINWARILAQMTYYFYSFFQATNGKDSKKVKFVVPSGNFGDILAGY----FAKKMGL 293 (514)
T ss_dssp HHHHHHHHHCSSCC--CCBCCCCSCCHHHHHHHHHHHHHHHHHHHSSSSCCCEEEEEECSSSHHHHHHH----HHHHHTC
T ss_pred HHHHHHHHhcccccccceeEeeCCCCHhHHhhHHHHHHHHHHHHhhhcCCCCcEEEEECCchHHHHHHH----HHHHcCC
Confidence 99999998773 578899999999999999999999999 65 46899999999999999999 4788998
Q ss_pred CCCCCeEEEEecCCCchHHHHHHhCCccccc-cCCccccccccccCCCccHHHHHHHH----------------------
Q 009781 356 VDRIPRLVCAQAANANPLYLYYKSGWKDFKP-VRANTTFASAIQIGDPVSIDRAVYAL---------------------- 412 (526)
Q Consensus 356 ~~~~prvi~Vq~~~~~~l~~a~~~G~~~~~~-~~~~~Tia~~i~i~~P~~~~~~l~~l---------------------- 412 (526)
|++|||+||++| ++++++|++|. +.+ ....+|++++|+|..|+|++|.++.+
T Consensus 294 --p~~rli~v~~~n-~~l~~~~~~G~--~~~~~~~~~Tis~amdi~~psn~er~l~~l~~~~~~~~~~~~d~~~v~~~~~ 368 (514)
T 1kl7_A 294 --PIEKLAIATNEN-DILDRFLKSGL--YERSDKVAATLSPAMDILISSNFERLLWYLAREYLANGDDLKAGEIVNNWFQ 368 (514)
T ss_dssp --CCCCEEEEECSC-CHHHHHHHHSE--EECCSSCCCCSCGGGCCSSCTTHHHHHHHHHHHHTSTTCHHHHHHHHHHHHH
T ss_pred --CCCEEEEEeCCc-chHHHHHhcCC--ccCCCCCCCeechhhhcCCCCcHHHHHHHHhccccccccccccHHHHHHHHH
Confidence 889999999999 99999999996 444 45568999999999999999998655
Q ss_pred --HhCCCe---------------EEEeCHHHHHHHHHHH-Hhc----CCeecchHHHHHHHHHHHHHcCCCCCCCeEEEE
Q 009781 413 --KNCDGI---------------VEEATEEELMDVSAQA-DST----GMFVCPHTGVALSALIKLRCKGVIGKTDKTVVV 470 (526)
Q Consensus 413 --~~~~g~---------------~v~Vsd~ei~~A~~~l-~~~----Gi~veP~sA~alAal~~l~~~g~i~~~~~vVvv 470 (526)
+++++. ++.|+|+|++++++++ +++ |+++|||||++++|+++++++| +.+++++|++
T Consensus 369 ~l~~~gg~~~~~~~~~~~~~~f~~~~Vsd~e~~~ai~~l~~~~~~~~G~~~ep~tAv~~aa~~~~~~~g-~~~~~~vV~l 447 (514)
T 1kl7_A 369 ELKTNGKFQVDKSIIEGASKDFTSERVSNEETSETIKKIYESSVNPKHYILDPHTAVGVCATERLIAKD-NDKSIQYISL 447 (514)
T ss_dssp HHHHHSEEECCHHHHHHHTTTEEEEECCHHHHHHHHHHHHHHCCSSTTCCCCHHHHHHHHHHHHHHHHH-CCTTSEEEEE
T ss_pred HHHhcCCeeccHHHHHHhhcCceEEEECHHHHHHHHHHHHHhCCCCCCEEEcccHHHHHHHHHHHHHhc-cCCCCcEEEE
Confidence 334444 7899999999999986 788 9999999999999999998876 5678899999
Q ss_pred ECCCCCCchHHHHhhhcc---------hhhH-HHhhh--cCCCccc-CCCHHHHHHHHHHHHhhc
Q 009781 471 STAHGLKFTQSKIDYHSQ---------NIKD-MACRL--ANPPVSV-KADFGSVMDVLKKYLLSK 522 (526)
Q Consensus 471 ~TG~g~K~~~~~~~~~~~---------~~~~-~~~~~--~~~~~~i-~~~~~~v~~~~~~~~~~~ 522 (526)
+||||+||++++.+.+.. .+|. +..-. ......+ ++|+++|+++|.+.+..+
T Consensus 448 ~Ta~~~Kf~~~v~~al~~~~~~~~~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 512 (514)
T 1kl7_A 448 STAHPAKFADAVNNALSGFSNYSFEKDVLPEELKKLSTLKKKLKFIERADVELVKNAIEEELAKM 512 (514)
T ss_dssp ECBCGGGGHHHHHHHHTTCSSCCHHHHTSCHHHHSGGGSCCCCCEECSCCHHHHHHHHHCSCSCC
T ss_pred ECCchhhhHHHHHHHhCCCcccccccCCCCHHHHHHHhCccceeecCcCCHHHHHHHHHHHHHHh
Confidence 999999999998877642 4555 22211 1223467 899999999998765443
No 3
>4f4f_A Threonine synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.90A {Brucella melitensis BV}
Probab=100.00 E-value=4.7e-64 Score=538.00 Aligned_cols=399 Identities=21% Similarity=0.302 Sum_probs=323.4
Q ss_pred CcceeeccCCCCCCCCCcccCCCceeeC--CCCCcceecccccccccCChHH---HHHh-hhhhcccccCCCCCCccccc
Q 009781 78 KFSAKYVPFNAGPSCTESYSLDEVVYRS--QSGGLLDVQHDMGALKHYDGAY---WKAL-FDSRVGKTTWPYGSGVWSKK 151 (526)
Q Consensus 78 ~~~~~y~s~~~t~~cg~~~~~~~~~~~c--~cGGll~v~~d~~~i~~~~~~~---~~~~-~~~~~~~~~~~~~~~iwr~~ 151 (526)
..+|||+| ||+....++|+++++.| +|||||+ | +.+|+++.+. |+.+ |.+++.+++.+|.+
T Consensus 3 ~~~m~y~s---tr~~~~~~~f~~a~l~gla~dgGLy~-P---~~~p~~~~~~~~~~~~~sy~~~a~~i~~~f~~------ 69 (468)
T 4f4f_A 3 GSSMKYVS---TRGEAPVLGFSDALLAGLARDGGLYL-P---QEYPQFTAEQIRALRGKSYVEVALAVLTPFTG------ 69 (468)
T ss_dssp --CCCEEE---TTSCSCCBCHHHHHHHCSCTTSCCEE-E---SSCCCCCHHHHHTTTTCCHHHHHHHHHGGGGT------
T ss_pred CCcceeEE---CCCCCCCCCHHHHHHhCCCCCCceEc-C---ccCCCCCHHHHHHHhCCCHHHHHHHHHHHHhc------
Confidence 35699999 99998999999999998 7999995 4 5788887654 5554 77888888877742
Q ss_pred cccCCCCCccchhccccc---------CCCceecccccccccCCCcEEEEecCCCCCCchhhhhHHHHHHHHHHH-HhcC
Q 009781 152 EWVLPEIDSDDIVSAFEG---------NSNLFWAERFGKEFLQMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRL-KRMN 221 (526)
Q Consensus 152 ~~~lP~~~~~~~vsl~eG---------~TPL~~~~~l~~~~lg~~~l~lK~E~~nPTGSFKDRga~~~v~~a~~~-~~~g 221 (526)
.+++.+++..+.+. -|||+++. +++|+|+|++||||||||||+.+++..+.++ .+.|
T Consensus 70 ----~~i~~~~l~~~~~~ay~~F~~~~~~pl~~l~---------~~~~~kee~~~PTgSFKDRga~~~~~~l~~a~~~~g 136 (468)
T 4f4f_A 70 ----GEIPAADFERMVREAYGTFRHDAVCPLVQTD---------ANEFVLELFHGPTLAFKDVAMQLLARMMDYVLAQRG 136 (468)
T ss_dssp ----TCSCHHHHHHHHHHHHHTSSSTTSSCEEEEE---------TTEEEEECCCSTTSBTHHHHHHHHHHHHHHHHHHTT
T ss_pred ----CCCCHHHHHHHHHHHHhcCCCCCCCceEEec---------CCeehHHhccCCcccHHHHHHHHHHHHHHHHHHhcC
Confidence 23344444444332 26776532 3699999999999999999999997666554 3444
Q ss_pred CCceEEEEeccchHH-HHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCC-E--EEEECCCHHHHHHHHHHHHhcC--
Q 009781 222 KPVIGVGCASTGDTS-AALSAYCASAGVPSIVFLPANKISIAQLVQPIANGA-F--VLSLDTDFDGCMQLIREVTSEL-- 295 (526)
Q Consensus 222 ~~~~~Vv~aSSGN~g-~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA-~--Vi~v~g~~dd~~~~~~~~~~~~-- 295 (526)
. ..+|+++|||||| ++++++|++.|++++||||++++++.|+.||+.+|+ + |+.++|+||||++.+++++++.
T Consensus 137 ~-~~~Vv~ASSGNtG~aa~aa~a~~~Gi~~~I~~P~~~~s~~k~~~~~~~gganV~vv~v~g~fdda~~~~k~~~~d~~~ 215 (468)
T 4f4f_A 137 E-RATIVGATSGDTGGAAIEAFGGRDNTDIFILFPNGRVSPVQQRQMTSSGFSNVHALSIEGNFDDCQNLVKGMFNDLEF 215 (468)
T ss_dssp C-CEEEEEECSSHHHHHHHHHHTTCSSEEEEEEEETTCSCHHHHHHHHCSCCTTEEEEEEESCHHHHHHHHHHHHHCHHH
T ss_pred C-CcEEEEECCchHHHHHHHHHHhccCCcEEEEeCCCCCCHHHHHHHHhcCCCeEEEeecCCCHHHHHHHHHHHHhcccc
Confidence 3 2689999999999 666888999999999999998789999999999974 4 5889999999999999998764
Q ss_pred ----CeeeccCCchhHHhHHHHHHHHHHHHcCCCCCcE---EEEeCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEEecC
Q 009781 296 ----PIYLANSLNSLRLEGQKTAAIEILQQFDWEVPDW---VIVPGGNLGNIYAFYKGFQMCKELGLVDRIPRLVCAQAA 368 (526)
Q Consensus 296 ----~~~~~ns~Np~~i~G~~T~a~EI~eQl~~~~pd~---VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prvi~Vq~~ 368 (526)
+++++|++||.+++||+|+++||++|++ .||. |+||+|+||+++|++. +++||+ |+.|||+| +.
T Consensus 216 ~~~~~~~~vnsin~~ri~GQ~T~~~Ei~~ql~--~~d~~v~vvVPvG~GG~i~g~~~----Ak~mGl--Pi~kli~a-~n 286 (468)
T 4f4f_A 216 CDALSLSGVNSINWARIMPQVVYYFTAALSLG--APDRAVSFTVPTGNFGDIFAGYV----AKRMGL--PIEQLIIA-TN 286 (468)
T ss_dssp HHHHTEEECCTTSHHHHGGGHHHHHHHHHHTT--TTSSCEEEEEECSSSHHHHHHHH----HHHHTC--CEEEEEEE-EC
T ss_pred ccccceEeCCCCCHHHHHhHHHHHHHHHHhcc--cCCCCeEEEEEeCCcHHHHHHHH----HHHhCC--CCCEEEEE-eC
Confidence 6899999999999999999999999998 5888 9999999999999995 478998 78899999 77
Q ss_pred CCchHHHHHHhCCccccccCCccccccccccCCCccHHHHHHHH---------------HhCCCe---------------
Q 009781 369 NANPLYLYYKSGWKDFKPVRANTTFASAIQIGDPVSIDRAVYAL---------------KNCDGI--------------- 418 (526)
Q Consensus 369 ~~~~l~~a~~~G~~~~~~~~~~~Tia~~i~i~~P~~~~~~l~~l---------------~~~~g~--------------- 418 (526)
++++++++|++|.+ .+.+...|++++|+++.|+|++|.++.+ +++++.
T Consensus 287 ~~~~l~~~l~~G~~--~~~~~~~Tia~smdi~~~sN~erl~~~l~~~d~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~ 364 (468)
T 4f4f_A 287 DNDILSRTLESGAY--EMRGVAQTTSPSMDIQISSNFERLLFEAHGRDAAAVRGLMQGLKQSGGFTISEKPLSAIRSEFS 364 (468)
T ss_dssp SCCHHHHHHHHSEE--ECCCCCCCSCGGGCCSSCTTHHHHHHHHTTTCHHHHHHHHHHHHHHSEEECCHHHHHHHHHHEE
T ss_pred CchHHHHHHHcCCc--eecCCcceeCchhhcCccchHHHHHHHHhccCHHHHHHHHHHHHhcCCeeccHHHHHHHhhcce
Confidence 77999999999964 4455678999999999999999976533 223333
Q ss_pred EEEeCHHHHHHHHHHH-HhcCCeecchHHHHHHHHHHHHHcCCCCCCCeEEEEECCCCCCchHHHHhhhc--chhhHHHh
Q 009781 419 VEEATEEELMDVSAQA-DSTGMFVCPHTGVALSALIKLRCKGVIGKTDKTVVVSTAHGLKFTQSKIDYHS--QNIKDMAC 495 (526)
Q Consensus 419 ~v~Vsd~ei~~A~~~l-~~~Gi~veP~sA~alAal~~l~~~g~i~~~~~vVvv~TG~g~K~~~~~~~~~~--~~~~~~~~ 495 (526)
.+.|+|+|+.++|+++ +++|+++|||+|+++||++++. .+++++|+++||||+||++++.+... .++|.-..
T Consensus 365 ~~~VsD~ei~~ai~~l~~~~g~~vEP~~Ava~aa~~~~~-----~~~~~~V~l~Ta~~~Kf~~~v~~a~~~~~~~p~~l~ 439 (468)
T 4f4f_A 365 AGRSTVDETAATIESVLSKDGYLLDPHSAIGVKVAREKA-----SGTAPMVVLATAHPAKFPDAVKAACGVEPQLPAWLC 439 (468)
T ss_dssp EEECCHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHC-----CSSSCEEEEECBCGGGSHHHHHHHHSCCCCCCGGGT
T ss_pred EEEECHHHHHHHHHHHHHHCCEEECHhHHHHHHHHHHHh-----CCCCeEEEEecCCccccHHHHHHHhCCCCCCChHHH
Confidence 6799999999999985 8899999999999999998863 35779999999999999999988763 23444222
Q ss_pred hhc---CCCcccCCCHHHHHHHHHHHH
Q 009781 496 RLA---NPPVSVKADFGSVMDVLKKYL 519 (526)
Q Consensus 496 ~~~---~~~~~i~~~~~~v~~~~~~~~ 519 (526)
... .....+++|+++|+++|.+..
T Consensus 440 ~l~~~~~~~~~~~~~~~~~~~~i~~~~ 466 (468)
T 4f4f_A 440 DLMQRKESFTVLHNELKIVEEYVRHHS 466 (468)
T ss_dssp TGGGSCCCCEEEESCHHHHHHHHHHHC
T ss_pred HHhcCccceeeCCCCHHHHHHHHHHHh
Confidence 211 223478899999999998754
No 4
>3v7n_A Threonine synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; 1.40A {Burkholderia thailandensis}
Probab=100.00 E-value=3.6e-64 Score=539.35 Aligned_cols=399 Identities=21% Similarity=0.255 Sum_probs=306.3
Q ss_pred ceeeccCCCCCCCC--CcccCCCceeeC--CCCCcceecccccccccCChH---HHHHh-hhhhcccccCCCCCCccccc
Q 009781 80 SAKYVPFNAGPSCT--ESYSLDEVVYRS--QSGGLLDVQHDMGALKHYDGA---YWKAL-FDSRVGKTTWPYGSGVWSKK 151 (526)
Q Consensus 80 ~~~y~s~~~t~~cg--~~~~~~~~~~~c--~cGGll~v~~d~~~i~~~~~~---~~~~~-~~~~~~~~~~~~~~~iwr~~ 151 (526)
+|||+| ||+.. ..++|+++++.| +|||||+ | +.+|+++.+ .|+.+ |.+++.+++.+|.
T Consensus 4 ~M~y~S---TR~~~~~~~~~f~~a~l~Gla~DgGLyv-P---~~~P~~~~~~~~~~~~~sy~ela~~il~~f~------- 69 (487)
T 3v7n_A 4 SMNYIS---TRGAGIGERHTFSDILLGGLAKDGGLYL-P---SEYPQVSADELARWRTLPYADLAFEILSKFC------- 69 (487)
T ss_dssp --CEEE---TTSTTTTSCCCHHHHTTCCCCTTSCCEE-E---SSCCCCCHHHHHHHTTCCHHHHHHHHHHHHC-------
T ss_pred cceEEE---CCCCCCCCCCCHHHHHHhCCCCCCceEc-C---ccCCCCCHHHHHHHhCCCHHHHHHHHHHHHh-------
Confidence 599999 99988 789999999998 7999995 4 578888765 46555 7788888877663
Q ss_pred cccCCCCCccchhccccc------------------CCCceecccccccccCCCc--EEEEecCCCCCCchhhhhHHHHH
Q 009781 152 EWVLPEIDSDDIVSAFEG------------------NSNLFWAERFGKEFLQMND--LWVKHCGISHTGSFKDLGMTVLV 211 (526)
Q Consensus 152 ~~~lP~~~~~~~vsl~eG------------------~TPL~~~~~l~~~~lg~~~--l~lK~E~~nPTGSFKDRga~~~v 211 (526)
.+++.+++..+.+. -|||+++.. . .+ +|+|+|++||||||||||+.++.
T Consensus 70 ----~~i~~~~l~~~i~~ay~~~~F~~~~~~~~~~~i~Pl~~l~~---~----~~~~l~vkee~~~PTgSFKDRga~~~~ 138 (487)
T 3v7n_A 70 ----DDIAAADLRAITRRTYTADVYRHARRGGNAADITPLTTLGT---E----NGAPVSLLELSNGPTLAFKDMAMQLLG 138 (487)
T ss_dssp ----SSSCHHHHHHHHHHHSCTTTTCCCCSSCCGGGSSCEEEEEE---E----TTEEEEEEECCCSTTSBTHHHHHHHHH
T ss_pred ----ccCCHHHHHHHHHHHhCcccCCCcccccccccCceeEEecC---C----CCcceeHHhhccCCcCcHHHHHHHHHH
Confidence 33444444444332 145554321 0 14 99999999999999999999985
Q ss_pred HHHHHH-HhcCCCceEEEEeccchHHHHHHHHHH-hcCCCEEEEcCCCcCCHHhHHhHHhCCC---EEEEECCCHHHHHH
Q 009781 212 SQVNRL-KRMNKPVIGVGCASTGDTSAALSAYCA-SAGVPSIVFLPANKISIAQLVQPIANGA---FVLSLDTDFDGCMQ 286 (526)
Q Consensus 212 ~~a~~~-~~~g~~~~~Vv~aSSGN~g~AlAa~aa-~~Gi~~~V~vP~~~~s~~k~~q~~~~GA---~Vi~v~g~~dd~~~ 286 (526)
..+.++ .+.|. ..+|+++||||||.|+++.++ +.|++|+||||++++++.|+.||+.+|+ +|+.|+|+||||++
T Consensus 139 ~ll~~a~~~~g~-~~~Vv~ASSGNtG~Aaa~a~~~~~Gi~~~I~~P~~~~s~~k~~qm~~~Ga~nv~vv~v~G~fDda~~ 217 (487)
T 3v7n_A 139 NLFEYTLAKHGE-TLNILGATSGDTGSAAEYAMRGKEGVRVFMLSPHKKMSAFQTAQMYSLQDPNIFNLAVNGVFDDCQD 217 (487)
T ss_dssp HHHHHHHHTTTC-CEEEEEECSSHHHHHHHHHHTTCTTEEEEEEEETTCSCHHHHHHHHTCCCTTEEEEEEESCHHHHHH
T ss_pred HHHHHHHHhcCC-CcEEEEeCChHHHHHHHHHHHhccCCeEEEEECCCCCCHHHHHHHHhcCCCcEEEEEECCCHHHHHH
Confidence 555444 33444 257999999999988554443 8999999999998789999999999998 88999999999999
Q ss_pred HHHHHHh------cCCeeeccCCchhHHhHHHHHHHHHHHHcC--CCCCcEEEEeCCchhHHHHHHHHHHHHHHcCCCCC
Q 009781 287 LIREVTS------ELPIYLANSLNSLRLEGQKTAAIEILQQFD--WEVPDWVIVPGGNLGNIYAFYKGFQMCKELGLVDR 358 (526)
Q Consensus 287 ~~~~~~~------~~~~~~~ns~Np~~i~G~~T~a~EI~eQl~--~~~pd~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~ 358 (526)
+++++++ +.+++++|++||.|++||+|+++|++.|+. |..||+|+||+|+||+++|++. +++||+ |
T Consensus 218 ~vk~~~~d~~~~~~~~l~~vns~Np~ri~gQ~tyy~~~~~el~~~~~~~d~vvVP~GngG~i~g~~~----A~~mGl--p 291 (487)
T 3v7n_A 218 IVKAVSNDHAFKAQQKIGTVNSINWARVVAQVVYYFKGYFAATRSNDERVSFTVPSGNFGNVCAGHI----ARMMGL--P 291 (487)
T ss_dssp HHHHHHTCHHHHHHTTEECCSTTCHHHHHHHHHHHHHHHHHTCSSTTCCEEEEEGGGCHHHHHHHHH----HHHTTC--C
T ss_pred HHHHhhhchHHHhhcCeeeeCCCCHHHHHhHHHHHHHHHHHHHhcCCCCcEEEEecCchHHHHHHHH----HHHcCC--C
Confidence 9999987 467899999999999999999999999985 3469999999999999999994 678998 7
Q ss_pred CCeEEEEecCCCchHHHHHHhCCccccccCCcccc---ccccccCCCccHHHHHHHHHhC---------------CC---
Q 009781 359 IPRLVCAQAANANPLYLYYKSGWKDFKPVRANTTF---ASAIQIGDPVSIDRAVYALKNC---------------DG--- 417 (526)
Q Consensus 359 ~prvi~Vq~~~~~~l~~a~~~G~~~~~~~~~~~Ti---a~~i~i~~P~~~~~~l~~l~~~---------------~g--- 417 (526)
++|||+||++| ++++++|++|.+ .+.+..+|+ +++|+|+.|+|++|+++.+... ++
T Consensus 292 ~~rli~a~~~n-~~l~~~~~~G~~--~~~~~~~Ti~t~s~smdI~~psn~er~l~~l~~~d~~~~~~~m~~l~~~g~~~l 368 (487)
T 3v7n_A 292 IEKLVVATNEN-DVLDEFFRTGAY--RVRSAQDTYHTSSPSMDISKASNFERFVFDLLGRDPARVVQLFRDVEQKGGFDL 368 (487)
T ss_dssp EEEEEEECTTC-HHHHHHHHHSEE--EC------------------CHHHHHHHHHHTTTCHHHHHHHHHHHHHHSEEET
T ss_pred CceEEEEeCCC-cHHHHHHHcCCc--ccCCCCCccccCCchhccCCCccHHHHHHHHhCCCHHHHHHHHHHHHhcCCeec
Confidence 88999999999 999999999964 455556788 9999999999999997765322 22
Q ss_pred --------------eEEEeCHHHHHHHHHHH-HhcCCeecchHHHHHHHHHHHHHcCCCCCCCeEEEEECCCCCCchHHH
Q 009781 418 --------------IVEEATEEELMDVSAQA-DSTGMFVCPHTGVALSALIKLRCKGVIGKTDKTVVVSTAHGLKFTQSK 482 (526)
Q Consensus 418 --------------~~v~Vsd~ei~~A~~~l-~~~Gi~veP~sA~alAal~~l~~~g~i~~~~~vVvv~TG~g~K~~~~~ 482 (526)
..+.|+|+|++++++++ +++|+++|||||++++++.++++ +++++|+++||||+||++++
T Consensus 369 ~~~~~~~~~~~~~~~~~~VsDee~~~air~l~~~~G~l~dPhtAva~aaa~~~~~-----~~~~~V~l~Ta~p~Kf~~~v 443 (487)
T 3v7n_A 369 AASGDFARVAEFGFVSGRSTHADRIATIRDVFERYRTMIDTHTADGLKVAREHLR-----PGVPMVVLETAQPIKFGESI 443 (487)
T ss_dssp TTTTCTHHHHHTTEEEECCCHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHTTSCC-----TTSCEEEEECBCGGGGHHHH
T ss_pred ccchhHHHHHhhcceEEEECHHHHHHHHHHHHHHcCEEEChhHHHHHHHHHHhhC-----CCCcEEEEecCCccccHHHH
Confidence 24689999999999985 88999999999999999887642 57789999999999999998
Q ss_pred Hhhhc--chhhHHHhhhcC---CCcccCCCHHHHHHHHHHH
Q 009781 483 IDYHS--QNIKDMACRLAN---PPVSVKADFGSVMDVLKKY 518 (526)
Q Consensus 483 ~~~~~--~~~~~~~~~~~~---~~~~i~~~~~~v~~~~~~~ 518 (526)
.+... .++|.-...... .-..+++|+++|+++|.+.
T Consensus 444 ~~a~~~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~i~~~ 484 (487)
T 3v7n_A 444 REALGQEPSRPAAFDGLEALPQRFEVVDANAQQVKDFIAAH 484 (487)
T ss_dssp HHHHSSCCCCCGGGTTGGGSCCCCEEEESCHHHHHHHHHTT
T ss_pred HHHhCCCCCCChHHHHHhcCcceeeecCCCHHHHHHHHHHH
Confidence 88753 234442221112 2347889999999998754
No 5
>3aey_A Threonine synthase; PLP, pyridoxal phosphate, lyase; 1.92A {Thermus thermophilus} PDB: 1uin_A* 1uim_A* 3aex_A* 1v7c_A
Probab=100.00 E-value=8.2e-61 Score=498.41 Aligned_cols=342 Identities=34% Similarity=0.538 Sum_probs=302.0
Q ss_pred CCccccccccCCCCCccchhcccccCCCceec--ccccccccCCCcEEEEecCCCCCCchhhhhHHHHHHHHHHHHhcCC
Q 009781 145 SGVWSKKEWVLPEIDSDDIVSAFEGNSNLFWA--ERFGKEFLQMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLKRMNK 222 (526)
Q Consensus 145 ~~iwr~~~~~lP~~~~~~~vsl~eG~TPL~~~--~~l~~~~lg~~~l~lK~E~~nPTGSFKDRga~~~v~~a~~~~~~g~ 222 (526)
++||||++| ||..+..+.+++++|+|||+++ +++++. +|. +||+|+|++|||||||||++.+++..+.+ .|
T Consensus 4 ~~~~ry~~~-lp~~~~~~~v~~~~g~TPL~~~~~~~l~~~-~g~-~v~~K~E~~~ptgS~KdR~a~~~l~~a~~---~g- 76 (351)
T 3aey_A 4 PLIERYRNL-LPVSEKTPVISLLEGSTPLIPLKGPEEARK-KGI-RLYAKYEGLNPTGSFKDRGMTLAVSKAVE---GG- 76 (351)
T ss_dssp CHHHHTGGG-TTCCTTSCCCCSCCCCCCEEECCCCHHHHT-TTC-EEEEEEGGGSTTSBTTHHHHHHHHHHHHH---TT-
T ss_pred CcccccHhh-CCCcccCCceecCCCCCCeeecCchhhHHH-hCC-eEEEEecCCCCcccHHHHHHHHHHHHHHh---cC-
Confidence 689999995 8854333568999999999999 888776 675 79999999999999999999999988753 34
Q ss_pred CceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCCeeeccC
Q 009781 223 PVIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDTDFDGCMQLIREVTSELPIYLANS 302 (526)
Q Consensus 223 ~~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~~~~~ns 302 (526)
..+|+++||||||.|+|++|+++|++|+||||++.++..|+.+++.+||+|+.++++++++++.+++++++.+++++|+
T Consensus 77 -~~~vv~~SsGN~g~alA~~a~~~G~~~~iv~p~~~~~~~k~~~~~~~GA~V~~v~~~~~~~~~~a~~l~~~~~~~~~~~ 155 (351)
T 3aey_A 77 -AQAVACASTGNTAASAAAYAARAGILAIVVLPAGYVALGKVAQSLVHGARIVQVEGNFDDALRLTQKLTEAFPVALVNS 155 (351)
T ss_dssp -CSEEEESCSSHHHHHHHHHHHHHTSEEEEEEETTCSCHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEECST
T ss_pred -CCEEEEeCCCHHHHHHHHHHHHcCCCEEEEECCCCCCHHHHHHHHHcCCEEEEECCCHHHHHHHHHHHHHhcCcEecCC
Confidence 4689999999999999999999999999999996578999999999999999999999999999999999888889999
Q ss_pred CchhHHhHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCchHHHHHHhCCc
Q 009781 303 LNSLRLEGQKTAAIEILQQFDWEVPDWVIVPGGNLGNIYAFYKGFQMCKELGLVDRIPRLVCAQAANANPLYLYYKSGWK 382 (526)
Q Consensus 303 ~Np~~i~G~~T~a~EI~eQl~~~~pd~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prvi~Vq~~~~~~l~~a~~~G~~ 382 (526)
.||.+++||+|+++||++|++ ..||+||+|+|+||+++|++++|+++..+|++++.+|||+||+++++++. .|+
T Consensus 156 ~n~~~~~g~~t~~~Ei~~q~~-~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~G~~~~~~~vigve~~~~~~~~----~g~- 229 (351)
T 3aey_A 156 VNPHRLEGQKTLAFEVVDELG-DAPHYHALPVGNAGNITAHWMGYKAYHALGKAKRLPRMLGFQAAGAAPLV----LGR- 229 (351)
T ss_dssp TCHHHHHHHHHHHHHHHHHHS-SCCSEEEEECSSSHHHHHHHHHHHHHHHHTSCSSCCEEEEEEEGGGCHHH----HTS-
T ss_pred CCccceeeeeeHHHHHHHHcC-CCCCEEEEecCchHHHHHHHHHHHHHHhccccCCCCeEEEEecCCCChhh----cCc-
Confidence 999999999999999999997 36899999999999999999999999999998778899999999987764 353
Q ss_pred cccccCCccccccccccCCCccHHHHHHHHHhCCCeEEEeCHHHHHHHHHHH-HhcCCeecchHHHHHHHHHHHHHcCCC
Q 009781 383 DFKPVRANTTFASAIQIGDPVSIDRAVYALKNCDGIVEEATEEELMDVSAQA-DSTGMFVCPHTGVALSALIKLRCKGVI 461 (526)
Q Consensus 383 ~~~~~~~~~Tia~~i~i~~P~~~~~~l~~l~~~~g~~v~Vsd~ei~~A~~~l-~~~Gi~veP~sA~alAal~~l~~~g~i 461 (526)
+....+|++++|+++.|.++++.+..++++.+.++.|+|+|++++++++ +++|+++||+||+++||++++.+++.+
T Consensus 230 ---~~~~~~t~a~gl~~~~~~~~~~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~~~gi~~epssa~alaa~~~~~~~~~~ 306 (351)
T 3aey_A 230 ---PVERPETLATAIRIGNPASWQGAVRAKEESGGVIEAVTDEEILFAYRYLAREEGIFCEPASAAAMAGVFKLLREGRL 306 (351)
T ss_dssp ---CCSSCCCSCGGGCCSSCTTHHHHHHHHHHHTCEEEEECHHHHHHHHHHHHHHTCCCBCHHHHHHHHHHHHHHHTTCS
T ss_pred ---ccCCccchhHhhcCCCCCCHHHHHHHHHHhCCeEEEECHHHHHHHHHHHHHhCCEEECchHHHHHHHHHHHHHhcCC
Confidence 1223468999999998989988888888889999999999999999986 779999999999999999999888777
Q ss_pred CCCCeEEEEECCCCCCchHHHHhhhcchhhHHHhhhcCCCcccCCCHHHHHHHH
Q 009781 462 GKTDKTVVVSTAHGLKFTQSKIDYHSQNIKDMACRLANPPVSVKADFGSVMDVL 515 (526)
Q Consensus 462 ~~~~~vVvv~TG~g~K~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~v~~~~ 515 (526)
.++++||+++||+|.||++.+.+.+ ..+..++++++.|.+.+
T Consensus 307 ~~~~~vv~i~tg~~~k~~~~~~~~~------------~~~~~~~~~~~~~~~~~ 348 (351)
T 3aey_A 307 EPESTVVLTLTGHGLKDPATAERVA------------ELPPPVPARLEAVAAAA 348 (351)
T ss_dssp CTTCEEEEEECBBGGGCHHHHCSCC------------CCCCCEESCHHHHHHHH
T ss_pred CCCCeEEEEECCCCCCCHHHHHHhc------------CCCCCCCCCHHHHHHHH
Confidence 7889999999999999999865433 34456789999888765
No 6
>2zsj_A Threonine synthase; PLP dependent enzyme, lyase; HET: PLP; 1.80A {Aquifex aeolicus}
Probab=100.00 E-value=3e-60 Score=494.30 Aligned_cols=343 Identities=34% Similarity=0.595 Sum_probs=302.2
Q ss_pred CCCccccccccCCCCCccchhcccccCCCceecccccccccCCCc-EEEEecCCCCCCchhhhhHHHHHHHHHHHHhcCC
Q 009781 144 GSGVWSKKEWVLPEIDSDDIVSAFEGNSNLFWAERFGKEFLQMND-LWVKHCGISHTGSFKDLGMTVLVSQVNRLKRMNK 222 (526)
Q Consensus 144 ~~~iwr~~~~~lP~~~~~~~vsl~eG~TPL~~~~~l~~~~lg~~~-l~lK~E~~nPTGSFKDRga~~~v~~a~~~~~~g~ 222 (526)
.+++|||+++ ||..+....+++++|+|||++++++++. +|.++ ||+|+|++|||||||||++.+++..+.+ .|
T Consensus 5 ~~~~~ry~~~-lp~~~~~~~v~~~~g~TPL~~~~~l~~~-~g~~~~i~~K~E~~~ptGS~KdR~a~~~l~~a~~---~g- 78 (352)
T 2zsj_A 5 QGIIKQYKKY-LPVDENTPIVTLYEGNTPLIEADNLARA-IGFKGKIYLKYEGLNPTGSFKDRGMTLAISKAVE---AG- 78 (352)
T ss_dssp CCHHHHSGGG-SSCCTTCCCCCCCCCCCCEEECHHHHHH-HTCCSEEEEEEGGGSTTSBTTHHHHHHHHHHHHH---TT-
T ss_pred cccceeeHhh-CCCccCCCceecccCCCCCeehHHHHHH-hCCCceEEEEECCCCCCccHHHHHHHHHHHHHHh---cC-
Confidence 3679999995 8854334568999999999999988776 67643 9999999999999999999999988753 34
Q ss_pred CceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCCeeeccC
Q 009781 223 PVIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDTDFDGCMQLIREVTSELPIYLANS 302 (526)
Q Consensus 223 ~~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~~~~~ns 302 (526)
..+|+++||||||.|+|++|+++|++|+||||++.++..|+.+++.+||+|+.++++++++.+.+++++++.+++++|+
T Consensus 79 -~~~vv~~SsGN~g~alA~~a~~~G~~~~i~~p~~~~~~~k~~~~~~~GA~v~~v~~~~~~~~~~a~~l~~~~~~~~~~~ 157 (352)
T 2zsj_A 79 -KRAVICASTGNTSASAAAYAARAGLRAYVLLPKGAVAIGKLSQAMIYGAKVLAIQGTFDDALNIVRKIGENFPVEIVNS 157 (352)
T ss_dssp -CCEEEECCSSHHHHHHHHHHHHHTCEEEEEEEGGGCCHHHHHHHHHTTCEEEEESSCHHHHHHHHHHHHHHSSEEECST
T ss_pred -CCEEEEeCCchHHHHHHHHHHhcCCcEEEEECCCCCCHHHHHHHHHcCCEEEEECCCHHHHHHHHHHHHHHcCcEECCC
Confidence 4689999999999999999999999999999996478999999999999999999999999999999999888889999
Q ss_pred CchhHHhHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCchHHHHHHhCCc
Q 009781 303 LNSLRLEGQKTAAIEILQQFDWEVPDWVIVPGGNLGNIYAFYKGFQMCKELGLVDRIPRLVCAQAANANPLYLYYKSGWK 382 (526)
Q Consensus 303 ~Np~~i~G~~T~a~EI~eQl~~~~pd~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prvi~Vq~~~~~~l~~a~~~G~~ 382 (526)
.||.+++||+|+++||++|++ ..||+||+|+|+||+++|++++|+++..+|++++.+|||+||+++++++. .|.
T Consensus 158 ~n~~~~~g~~t~~~Ei~~q~~-~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~G~~~~~~~vigve~~~~~~~~----~g~- 231 (352)
T 2zsj_A 158 VNPYRIEGQKTAAFEICDTLG-EAPDYHFIPVGNAGNITAYWKGFKIYYEEGKITKLPRMMGWQAEGAAPIV----KGY- 231 (352)
T ss_dssp TCTHHHHHHTHHHHHHHHHHS-SCCSEEEEECSSSHHHHHHHHHHHHHHHTTSCSSCCEEEEEEETTBCHHH----HTS-
T ss_pred CCcchhhhHhHHHHHHHHHcC-CCCCEEEEeCCCcHHHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCcHHh----cCC-
Confidence 999999999999999999997 36899999999999999999999999999998778899999999988764 343
Q ss_pred cccccCCccccccccccCCCccHHHHHHHHHhCCCeEEEeCHHHHHHHHHHH-HhcCCeecchHHHHHHHHHHHHHcCCC
Q 009781 383 DFKPVRANTTFASAIQIGDPVSIDRAVYALKNCDGIVEEATEEELMDVSAQA-DSTGMFVCPHTGVALSALIKLRCKGVI 461 (526)
Q Consensus 383 ~~~~~~~~~Tia~~i~i~~P~~~~~~l~~l~~~~g~~v~Vsd~ei~~A~~~l-~~~Gi~veP~sA~alAal~~l~~~g~i 461 (526)
+....+|++++|+++.|.++++.+..++++.+.++.|+|+|++++++++ +++|+++||+||+++||++++.+++.+
T Consensus 232 ---~~~~~~t~a~gl~~~~~~~~~~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~~~gi~~epssa~alaa~~~~~~~~~~ 308 (352)
T 2zsj_A 232 ---PIKNPQTIATAIKIGNPYSWKSALKAAQESGGKIDAVSDSEILYAYKLIASTEGVFCEPASAASVAGLIKLVREGFF 308 (352)
T ss_dssp ---CCSSCCCSCGGGCCSSCTTHHHHHHHHHHHTCEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHHTTCC
T ss_pred ---ccCCCcchhHHhcCCCCCcHHHHHHHHHHhCCeEEEECHHHHHHHHHHHHHhCCeeECchHHHHHHHHHHHHHhCCC
Confidence 1223468999999998989988888888889999999999999999986 679999999999999999999888777
Q ss_pred CCCCeEEEEECCCCCCchHHHHhhhcchhhHHHhhhcCCCcccCCCHHHHHHH
Q 009781 462 GKTDKTVVVSTAHGLKFTQSKIDYHSQNIKDMACRLANPPVSVKADFGSVMDV 514 (526)
Q Consensus 462 ~~~~~vVvv~TG~g~K~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~v~~~ 514 (526)
.++++||+++||+|.||++.+++. ...+..++++++.+.+.
T Consensus 309 ~~~~~vv~i~tg~~~k~~~~~~~~------------~~~~~~~~~~~~~~~~~ 349 (352)
T 2zsj_A 309 KGGEVVTCTLTGNGLKDPDTAIKV------------CEEPITVPPDFDEVVKV 349 (352)
T ss_dssp CSCCEEEEEECBBGGGCHHHHHHH------------CCCCEEECSCHHHHHHH
T ss_pred CCCCeEEEEeCCCCccChHHHHHh------------ccCCCCCCCCHHHHHHh
Confidence 788999999999999999986533 23456788999888775
No 7
>2d1f_A Threonine synthase; amino acid synthesis, pyridoxal-5'-phosphate, PLP, lyase; HET: PLP; 2.50A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.7e-60 Score=495.18 Aligned_cols=342 Identities=35% Similarity=0.549 Sum_probs=301.1
Q ss_pred CCCccccccccCCCCCccchhcccccCCCceecccccccccCCCcEEEEecCCCCCCchhhhhHHHHHHHHHHHHhcCCC
Q 009781 144 GSGVWSKKEWVLPEIDSDDIVSAFEGNSNLFWAERFGKEFLQMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLKRMNKP 223 (526)
Q Consensus 144 ~~~iwr~~~~~lP~~~~~~~vsl~eG~TPL~~~~~l~~~~lg~~~l~lK~E~~nPTGSFKDRga~~~v~~a~~~~~~g~~ 223 (526)
.+++|||+++ ||..+....+++++|+|||++++++++. +|. +||+|+|++|||||||||++.+++..+.+ .|
T Consensus 13 ~~~~~ry~~~-lp~~~~~~~v~~~~g~TPL~~~~~l~~~-~g~-~i~~K~E~~~ptgSfKdR~a~~~l~~a~~---~g-- 84 (360)
T 2d1f_A 13 PGVIAAYRDR-LPVGDDWTPVTLLEGGTPLIAATNLSKQ-TGC-TIHLKVEGLNPTGSFKDRGMTMAVTDALA---HG-- 84 (360)
T ss_dssp CCHHHHTGGG-SCCCSSCCCCCCCCCCCCEEECHHHHHH-HSS-EEEEEEGGGSTTSBTTHHHHHHHHHHHHH---TT--
T ss_pred ccchhhhHHh-CCCcccCCccccccCCCCCeechhhHHH-hCC-eEEEEECCCCCCcCHHHHHHHHHHHHHHH---CC--
Confidence 3689999995 8854233568899999999999998776 675 79999999999999999999999988753 34
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCC-eeeccC
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDTDFDGCMQLIREVTSELP-IYLANS 302 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~-~~~~ns 302 (526)
..+|+++||||||+|+|++|+++|++|+||||++.++..|+.+++.+||+|+.++++++++++.+++++++.+ +|++|+
T Consensus 85 ~~~vv~aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~~k~~~~~~~GA~v~~v~~~~~~~~~~a~~l~~~~~~~~~i~~ 164 (360)
T 2d1f_A 85 QRAVLCASTGNTSASAAAYAARAGITCAVLIPQGKIAMGKLAQAVMHGAKIIQIDGNFDDCLELARKMAADFPTISLVNS 164 (360)
T ss_dssp CSEEEECCSSHHHHHHHHHHHHHTCEEEEEECSSCCCHHHHHHHHHTTCEEEEBSSCHHHHHHHHHHHHHHCTTEEECST
T ss_pred CCEEEEeCCcHHHHHHHHHHHHcCCcEEEEEcCCCCCHHHHHHHHHcCCEEEEECCCHHHHHHHHHHHHHhcCCeEEcCC
Confidence 4689999999999999999999999999999997578999999999999999999999999999999998877 888999
Q ss_pred CchhHHhHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCchHHHHHHhCCc
Q 009781 303 LNSLRLEGQKTAAIEILQQFDWEVPDWVIVPGGNLGNIYAFYKGFQMCKELGLVDRIPRLVCAQAANANPLYLYYKSGWK 382 (526)
Q Consensus 303 ~Np~~i~G~~T~a~EI~eQl~~~~pd~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prvi~Vq~~~~~~l~~a~~~G~~ 382 (526)
.||.+++||+|+++||++|++ ..||+||+|+|+||+++|++++|+++..+|++++.+|||+||+++++++. .|+
T Consensus 165 ~n~~~~~g~~t~~~Ei~~q~~-~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~G~~~~~~~vigve~~~~~~~~----~g~- 238 (360)
T 2d1f_A 165 VNPVRIEGQKTAAFEIVDVLG-TAPDVHALPVGNAGNITAYWKGYTEYHQLGLIDKLPRMLGTQAAGAAPLV----LGE- 238 (360)
T ss_dssp TCHHHHHHHTHHHHHHHHHHS-SCCSEEEEECSSSHHHHHHHHHHHHHHHTTSCSSCCEEEEEEEGGGCHHH----HSS-
T ss_pred CChhhhhhHHHHHHHHHHHcC-CCCCEEEEeCCchHHHHHHHHHHHHHHhccccccCceEEEEecCCCCHHh----cCC-
Confidence 999999999999999999997 36899999999999999999999999999998778899999999987764 353
Q ss_pred cccccCCccccccccccCCCccHHHHHHHHHhCCCeEEEeCHHHHHHHHHHH-HhcCCeecchHHHHHHHHHHHHHcCCC
Q 009781 383 DFKPVRANTTFASAIQIGDPVSIDRAVYALKNCDGIVEEATEEELMDVSAQA-DSTGMFVCPHTGVALSALIKLRCKGVI 461 (526)
Q Consensus 383 ~~~~~~~~~Tia~~i~i~~P~~~~~~l~~l~~~~g~~v~Vsd~ei~~A~~~l-~~~Gi~veP~sA~alAal~~l~~~g~i 461 (526)
+....+|++++|+++.|.++++.+..++++.+.++.|+|+|++++++++ +++|+++||+||+++||++++.+++.+
T Consensus 239 ---~~~~~~t~a~gl~~~~~~~~~~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~~eGi~~epssa~alaa~~~~~~~~~~ 315 (360)
T 2d1f_A 239 ---PVSHPETIATAIRIGSPASWTSAVEAQQQSKGRFLAASDEEILAAYHLVARVEGVFVEPASAASIAGLLKAIDDGWV 315 (360)
T ss_dssp ---CCSSCCCSCGGGCCSSCTTHHHHHHHHHHHTCEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHHHTSS
T ss_pred ---ccCCccchHHHhCCCCCCcHHHHHHHHHHhCCeEEEECHHHHHHHHHHHHHhcCeeECchHHHHHHHHHHHHHhCCC
Confidence 1223468999999998989888888888889999999999999999986 779999999999999999999887777
Q ss_pred CCCCeEEEEECCCCCCchHHHHhhhcchhhHHHhhhcCCCcccCCCHHHHHHH
Q 009781 462 GKTDKTVVVSTAHGLKFTQSKIDYHSQNIKDMACRLANPPVSVKADFGSVMDV 514 (526)
Q Consensus 462 ~~~~~vVvv~TG~g~K~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~v~~~ 514 (526)
.++++||+++||+|.||++.+.+.+ ..+..++++++++.+.
T Consensus 316 ~~~~~vv~i~tg~~~k~~~~~~~~~------------~~~~~~~~~~~~~~~~ 356 (360)
T 2d1f_A 316 ARGSTVVCTVTGNGLKDPDTALKDM------------PSVSPVPVDPVAVVEK 356 (360)
T ss_dssp CTTCEEEEEECBBGGGCHHHHHSSC------------CCCCCBCSCHHHHHHT
T ss_pred CCCCeEEEEeCCCCcCCHHHHHHhc------------cCCCCCCccHHHHHHH
Confidence 7889999999999999999875443 3345678898888764
No 8
>1vb3_A Threonine synthase; PLP-dependent enzyme, lyase; HET: KPA; 2.20A {Escherichia coli} SCOP: c.79.1.1
Probab=100.00 E-value=1.4e-61 Score=516.55 Aligned_cols=395 Identities=23% Similarity=0.277 Sum_probs=322.0
Q ss_pred eeeccCCCCCCCCCcccCCCceeeC--CCCCcceecccccccccCChHHHHHh----hhhhcccccCCCCCCcccccccc
Q 009781 81 AKYVPFNAGPSCTESYSLDEVVYRS--QSGGLLDVQHDMGALKHYDGAYWKAL----FDSRVGKTTWPYGSGVWSKKEWV 154 (526)
Q Consensus 81 ~~y~s~~~t~~cg~~~~~~~~~~~c--~cGGll~v~~d~~~i~~~~~~~~~~~----~~~~~~~~~~~~~~~iwr~~~~~ 154 (526)
|||+| ||+....++|++++++| +|||+|+ | +.+|.++.+.|+.+ |.+++..++. +|+
T Consensus 1 m~y~s---tr~~~~~~~~~~a~~~gl~~~GGl~v-p---~~~p~~~~~~~~~~~~~~y~~~a~~i~~----------~f~ 63 (428)
T 1vb3_A 1 MKLYN---LKDHNEQVSFAQAVTQGLGKNQGLFF-P---HDLPEFSLTEIDEMLKLDFVTRSAKILS----------AFI 63 (428)
T ss_dssp CCEEE---TTEEEEEECHHHHHHHCSBGGGBCEE-E---SSCCCCCHHHHHHHTTSCHHHHHHHHHH----------HHH
T ss_pred Cccee---CCCCCCCcCHHHHHHccCCCCCcEEe-c---cccCCCCHHHHHHHhCCCHHHHHHHHHH----------HHh
Confidence 89999 99877889999999999 7999995 4 56788886655543 5555544333 333
Q ss_pred CCCCCccchhc----ccccCCCceecccccccccCCCcEEEEecCCCCCCchhhhhHHHHHHHHHHHHhcCCCceEEEEe
Q 009781 155 LPEIDSDDIVS----AFEGNSNLFWAERFGKEFLQMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLKRMNKPVIGVGCA 230 (526)
Q Consensus 155 lP~~~~~~~vs----l~eG~TPL~~~~~l~~~~lg~~~l~lK~E~~nPTGSFKDRga~~~v~~a~~~~~~g~~~~~Vv~a 230 (526)
.|+++.+++.. ...+.|||+++++ ++|+|++++|||||||||++.+++..+.+.+ .++ ..+|+++
T Consensus 64 ~~~~~~~~l~~~~~~~~~~~TPL~~l~~---------~i~~~E~~~~pTgSfKdr~a~~l~~~l~~a~-~~~-~~~Iv~a 132 (428)
T 1vb3_A 64 GDEIPQEILEERVRAAFAFPAPVANVES---------DVGCLELFHGPTLAFKDFGGRFMAQMLTHIA-GDK-PVTILTA 132 (428)
T ss_dssp GGGSCHHHHHHHHHHHCCSCCCEEEEET---------TEEEEECCCSTTSBTHHHHHHHHHHHHHHHT-TTC-CEEEEEE
T ss_pred cCCCCHHHHHHHHHHHhCCCCCeEEecC---------CeEEeeccCCCcccHHHHHHHHHHHHHHHHH-hcC-CCEEEec
Confidence 23444444422 2347899998652 6999777778999999999999876665542 233 5789999
Q ss_pred ccchHHHHHH-HHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEE--EEECCCHHHHHHHHHHHHhc------CCeeecc
Q 009781 231 STGDTSAALS-AYCASAGVPSIVFLPANKISIAQLVQPIANGAFV--LSLDTDFDGCMQLIREVTSE------LPIYLAN 301 (526)
Q Consensus 231 SSGN~g~AlA-a~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~V--i~v~g~~dd~~~~~~~~~~~------~~~~~~n 301 (526)
||||||.|+| ++|++.|++|+||||++++++.|+.||+.+||+| +.+++++|+|++.+++++++ .+++++|
T Consensus 133 tsGNtG~A~A~~~a~~~G~~~~I~~P~~~~s~~k~~~m~~~GA~V~~v~v~g~~d~~~~~~~~~~~d~~~~~~~~~~~~n 212 (428)
T 1vb3_A 133 TSGDTGAAVAHAFYGLPNVKVVILYPRGKISPLQEKLFCTLGGNIETVAIDGDFDACQALVKQAFDDEELKVALGLNSAN 212 (428)
T ss_dssp CSSSHHHHHHHHTTTCTTEEEEEEEETTCSCHHHHHHHHSCCTTEEEEEEESCHHHHHHHHHHGGGCHHHHHHHTEECCS
T ss_pred CCchHHHHHHHHHhhhcCCeEEEEECCCCCCHHHHHHHHhcCCeEEEEEeCCCHHHHHHHHHHHHhchhhhhhcCeeeCC
Confidence 9999999999 6999999999999999658999999999999999 99999999999999998864 5788999
Q ss_pred CCchhHHhHHHHHHHHHHHHcCCC--CCcEEEEeCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCchHHHHHHh
Q 009781 302 SLNSLRLEGQKTAAIEILQQFDWE--VPDWVIVPGGNLGNIYAFYKGFQMCKELGLVDRIPRLVCAQAANANPLYLYYKS 379 (526)
Q Consensus 302 s~Np~~i~G~~T~a~EI~eQl~~~--~pd~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prvi~Vq~~~~~~l~~a~~~ 379 (526)
++||.+++||+|+++||++|+.+. .||+||||+|+||+++|+++++ ++|+ |.+|||+|++.+ +.+++++++
T Consensus 213 ~~n~~~~~gq~t~~~Ei~~ql~~~g~~~d~vvvpvG~GG~i~G~~~a~----~~g~--p~~kii~a~~~~-~~l~~~~~~ 285 (428)
T 1vb3_A 213 SINISRLLAQICYYFEAVAQLPQETRNQLVVSVPSGNFGDLTAGLLAK----SLGL--PVKRFIAATNVN-DTVPRFLHD 285 (428)
T ss_dssp TTSHHHHHHTTHHHHHHHTTSCTTTTTSEEEEEECSSCHHHHHHHHHH----HTTC--CCSEEEEEECSC-CHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHcccccCCCCEEEEeCCchHHHHHHHHHH----HcCC--CCCeEEeecCCC-hHHHHHHHc
Confidence 999999999999999999999863 6999999999999999999764 5777 788999999876 678899999
Q ss_pred CCccccccCCccccccccccCCCccHHHHHHHHHhC-----CCeEEEeCHHHHHHHHHHHHhcCCeecchHHHHHHHHHH
Q 009781 380 GWKDFKPVRANTTFASAIQIGDPVSIDRAVYALKNC-----DGIVEEATEEELMDVSAQADSTGMFVCPHTGVALSALIK 454 (526)
Q Consensus 380 G~~~~~~~~~~~Tia~~i~i~~P~~~~~~l~~l~~~-----~g~~v~Vsd~ei~~A~~~l~~~Gi~veP~sA~alAal~~ 454 (526)
|.+ .+....+|++++|+++.|+++++.++++++. .+.++.|+|+|+++++++++++|+++||+||+++|++++
T Consensus 286 G~~--~~~~~~~tis~g~~i~~p~~~~~~~~l~~~~~~~~~~~~~~~Vsd~e~~~a~~~l~~eGi~~~p~sa~a~aa~~~ 363 (428)
T 1vb3_A 286 GQW--SPKATQATLSNAMDVSQPNNWPRVEELFRRKIWQLKELGYAAVDDETTQQTMRELKELGYTSEPHAAVAYRALRD 363 (428)
T ss_dssp SCC--CCCCCCCCSSGGGCCSSCTTHHHHHHHHHHTTCCGGGSEEEECCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHT
T ss_pred CCc--ccCCCCCcccchhcCCCCccHHHHHHHHhcchhhhhCcEEEEECHHHHHHHHHHHHHCCeEECchHHHHHHHHHH
Confidence 963 4555568999999999999999988877766 678999999999999998877999999999999999987
Q ss_pred HHHcCCCCCCCeEEEEECCCCCCchHHHHhhhcc--hhhHHHhhhcCC---CcccCCCHHHHHHHHHH
Q 009781 455 LRCKGVIGKTDKTVVVSTAHGLKFTQSKIDYHSQ--NIKDMACRLANP---PVSVKADFGSVMDVLKK 517 (526)
Q Consensus 455 l~~~g~i~~~~~vVvv~TG~g~K~~~~~~~~~~~--~~~~~~~~~~~~---~~~i~~~~~~v~~~~~~ 517 (526)
+.+ ++++||+++||+|.||++++.++... .+|.-....... ...+++|.++++++|.+
T Consensus 364 ~~~-----~~~~vV~i~tg~~~K~~~~v~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 426 (428)
T 1vb3_A 364 QLN-----PGEYGLFLGTAHPAKFKESVEAILGETLDLPKELAERADLPLLSHNLPADFAALRKLMMN 426 (428)
T ss_dssp TCC-----TTCEEEEEECBCGGGGHHHHHHHHTSCCCCCHHHHHHHSSCCCCEEEESCHHHHHHHHTT
T ss_pred HhC-----CCCcEEEEeCCCCCCCHHHHHHHhCCCCCCChHHHHHhcCcceeeeCCCCHHHHHHHHHh
Confidence 653 56799999999999999999887642 344422222222 23678999999988754
No 9
>3ss7_X D-serine dehydratase; type II fold, ALFA,beta-elimination, P 5'-phosphate, lyase; HET: PLP; 1.55A {Escherichia coli} PDB: 3ss9_X* 3r0x_A* 3r0z_A
Probab=100.00 E-value=7.3e-56 Score=474.13 Aligned_cols=372 Identities=16% Similarity=0.140 Sum_probs=302.0
Q ss_pred CCCCCcccCCCceeeCCCCCcceecccccccccCChHHHHHhhhhhcccccCCCCCCccccccccCCCCCccchhccccc
Q 009781 90 PSCTESYSLDEVVYRSQSGGLLDVQHDMGALKHYDGAYWKALFDSRVGKTTWPYGSGVWSKKEWVLPEIDSDDIVSAFEG 169 (526)
Q Consensus 90 ~~cg~~~~~~~~~~~c~cGGll~v~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~iwr~~~~~lP~~~~~~~vsl~eG 169 (526)
+.|+..++.++..|+|||+++++... +.+ .++.+ + +.+.. ..+|||.+| ||....+..++++++
T Consensus 14 ~~~~~~~~~~~~~w~~~~~~~~~~~~--~~~-~~~~~---d-i~~a~--------~~l~~~~~~-l~~~~~~~~~~~g~~ 77 (442)
T 3ss7_X 14 PLVKDLVALKETTWFNPGTTSLAEGL--PYV-GLTEQ---D-VQDAH--------ARLSRFAPY-LAKAFPETAATGGII 77 (442)
T ss_dssp THHHHHHTTCCCEEECTTCCCHHHHG--GGT-SCCHH---H-HHHHH--------HHHHHHHHH-HHHHSGGGGGGTTCC
T ss_pred hHHHHHhccCCceeeCCCCCchhhhc--CcC-CCCHH---H-HHHHH--------HHHHhCHHh-HhhhChhhhccCCCC
Confidence 45667788899999999999875211 111 11221 1 22111 137999985 786666778899999
Q ss_pred CCCceeccccc----ccccCC---CcEEEEecCCCC-CCchhhhhHHHHHHHHHH--HHhcCCC---c------------
Q 009781 170 NSNLFWAERFG----KEFLQM---NDLWVKHCGISH-TGSFKDLGMTVLVSQVNR--LKRMNKP---V------------ 224 (526)
Q Consensus 170 ~TPL~~~~~l~----~~~lg~---~~l~lK~E~~nP-TGSFKDRga~~~v~~a~~--~~~~g~~---~------------ 224 (526)
+|||+++++++ +. +|+ .+||+|+|++|| |||||||++.+++..+.+ ..+.|.- .
T Consensus 78 ~TPL~~~~~l~~~l~~~-~g~~~~~~v~lK~E~~~p~tGSfK~Rga~~~i~~l~~~~a~~~G~l~~g~~~~~l~~~~~r~ 156 (442)
T 3ss7_X 78 ESELVAIPAMQKRLEKE-YQQPISGQLLLKKDSHLPISGSIKARGGIYEVLAHAEKLALEAGLLTLDDDYSKLLSPEFKQ 156 (442)
T ss_dssp CCCEEECHHHHHHHHHH-HTCCCCSEEEEEEGGGCTTTSBTHHHHHHHHHHHHHHHHHHHTTSCCTTSCGGGGGSHHHHH
T ss_pred CCCcEEhHhhhhHHHHh-hCCCcCCeEEEeecCCCCCCCCcHHHHHHHHHHHHhHHHHHHcCCCCCCcchhhhhhhhhhh
Confidence 99999999876 54 563 589999999999 999999999999986422 1334420 0
Q ss_pred ----eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcC-Ceee
Q 009781 225 ----IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDTDFDGCMQLIREVTSEL-PIYL 299 (526)
Q Consensus 225 ----~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~-~~~~ 299 (526)
.+|+++||||||.|+|++|+++|++|+||||++ ++..|+.+++.+||+|+.++++++++.+.+++++++. ++|+
T Consensus 157 ~~~~~~vv~aSsGNhg~avA~~aa~~G~~~~Ivmp~~-~~~~k~~~~r~~GA~Vv~v~~~~~~a~~~a~~~a~~~~~~~~ 235 (442)
T 3ss7_X 157 FFSQYSIAVGSTGNLGLSIGIMSARIGFKVTVHMSAD-ARAWKKAKLRSHGVTVVEYEQDYGVAVEEGRKAAQSDPNCFF 235 (442)
T ss_dssp HHHTSEEEEECSSHHHHHHHHHHHHHTCEEEEEEETT-SCHHHHHHHHHTTCEEEEESSCHHHHHHHHHHHHHTCTTEEE
T ss_pred hccCcEEEEECCCHHHHHHHHHHHHhCCcEEEEECCC-CCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHhCCCcee
Confidence 389999999999999999999999999999997 7999999999999999999999999999999998886 4888
Q ss_pred ccCCch-hHHhHHHHHHHHHHHHcC-------CCCCcEEEEeCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCc
Q 009781 300 ANSLNS-LRLEGQKTAAIEILQQFD-------WEVPDWVIVPGGNLGNIYAFYKGFQMCKELGLVDRIPRLVCAQAANAN 371 (526)
Q Consensus 300 ~ns~Np-~~i~G~~T~a~EI~eQl~-------~~~pd~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prvi~Vq~~~~~ 371 (526)
+++.|+ ..++||+|+++||++|++ |..||+||+|+|+||+++|++++|+++. + +.+|||+||+++++
T Consensus 236 i~~~n~~~~~~G~~t~g~Ei~eQl~~~g~~vD~~~Pd~VvvpvG~GG~~aGi~~~lk~~~--~---~~v~vigVep~~~~ 310 (442)
T 3ss7_X 236 IDDENSRTLFLGYSVAGQRLKAQFAQQGRIVDADNPLFVYLPCGVGGGPGGVAFGLKLAF--G---DHVHCFFAEPTHSP 310 (442)
T ss_dssp CCTTTCHHHHHHHHHHHHHHHHHHHHHTCCCBTTBCEEEEEECSSSHHHHHHHHHHHHHH--G---GGEEEEEEEETTCC
T ss_pred CCCCChHHHHHHHHHHHHHHHHHHHhhcCcccccCCCEEEEEeCCchHHHHHHHHHHHhc--C---CCCEEEEEEeCCch
Confidence 988875 579999999999999985 3468899999999999999999998753 2 45799999999999
Q ss_pred hHHHHHHhCCcccccc----CCccccccccccCCCccHHHHHHHHHhCCCeEEEeCHHHHHHHHHHH-HhcCCeecchHH
Q 009781 372 PLYLYYKSGWKDFKPV----RANTTFASAIQIGDPVSIDRAVYALKNCDGIVEEATEEELMDVSAQA-DSTGMFVCPHTG 446 (526)
Q Consensus 372 ~l~~a~~~G~~~~~~~----~~~~Tia~~i~i~~P~~~~~~l~~l~~~~g~~v~Vsd~ei~~A~~~l-~~~Gi~veP~sA 446 (526)
++..++..|....... ....|++++|+++.|..+ .+..+++..+.++.|+|+|++++++++ +++|+++||++|
T Consensus 311 ~~~~~~~~G~~~~~~v~~~g~~~~TiAdgl~v~~~~~~--~~~~~~~~~d~~~~Vsd~e~~~a~~~L~~~eGi~~epssa 388 (442)
T 3ss7_X 311 CMLLGVHTGLHDQISVQDIGIDNLTAADGLAVGRASGF--VGRAMERLLDGFYTLSDQTMYDMLGWLAQEEGIRLEPSAL 388 (442)
T ss_dssp HHHHHHHHSCGGGCBGGGGTCCCCCSCGGGCCSBCCSS--HHHHHGGGCCEEEEECHHHHHHHHHHHHHHHCCCCCGGGG
T ss_pred HHHHHHhcCCCceeeeccCCCchhhHHhhcCCCCCchh--HHHHHHhhCCeEEEECHHHHHHHHHHHHHHCCCeEcHHHH
Confidence 9999999996432111 145799999999988765 456678888999999999999999986 779999999999
Q ss_pred HHHHHHHHHHHc-C-----CCCC----CCeEEEEECCCCCCchHHHHhhh
Q 009781 447 VALSALIKLRCK-G-----VIGK----TDKTVVVSTAHGLKFTQSKIDYH 486 (526)
Q Consensus 447 ~alAal~~l~~~-g-----~i~~----~~~vVvv~TG~g~K~~~~~~~~~ 486 (526)
+++||++++.++ + .+.+ +++||+++||+++|..+.+.+|.
T Consensus 389 aalAa~~~l~~~~~~~~~~~l~~~~~~~~~vv~i~TGG~~~~~~~~~~~~ 438 (442)
T 3ss7_X 389 AGMAGPQRVCASVSYQQMHGFSAEQLRNTTHLVWATGGGMVPEEEMNQYL 438 (442)
T ss_dssp GGGGHHHHHHHCHHHHHHHTCCHHHHHTCEEEEEECBCTTCCHHHHHHHH
T ss_pred HHHHHHHHHHhchhhHHhcCCCcccCCCCeEEEEECCCCCCCHHHHHHHH
Confidence 999999988762 1 2233 78999999999999888776554
No 10
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*
Probab=100.00 E-value=4e-53 Score=443.76 Aligned_cols=315 Identities=16% Similarity=0.175 Sum_probs=259.5
Q ss_pred CCccccccccCCCCCccchhcccccCCCceecccccccccCCCcEEEEecCCCCCCchhhhhHHHHHHHHHHHHhcCCCc
Q 009781 145 SGVWSKKEWVLPEIDSDDIVSAFEGNSNLFWAERFGKEFLQMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLKRMNKPV 224 (526)
Q Consensus 145 ~~iwr~~~~~lP~~~~~~~vsl~eG~TPL~~~~~l~~~~lg~~~l~lK~E~~nPTGSFKDRga~~~v~~a~~~~~~g~~~ 224 (526)
++||||+++ +|.+ ....++|||++++++++. +|. +||+|+|++|||||||||++.+++..+.+ .+ .
T Consensus 28 ~~~~ry~~~-~p~~------~~~~~~TPL~~l~~l~~~-~g~-~i~~K~E~~~ptGSfKdRga~~~l~~a~~---~g--~ 93 (372)
T 1p5j_A 28 QQMGRGSEF-MMSG------EPLHVKTPIRDSMALSKM-AGT-SVYLKMDSAQPSGSFKIRGIGHFCKRWAK---QG--C 93 (372)
T ss_dssp -------------C------CCSSCCCCEEEEHHHHHH-HTS-CEEEECGGGSGGGBTTHHHHHHHHHHHHH---TT--C
T ss_pred CccccHHHh-cccc------cCCCCCCCceEcHhhHHH-hCC-EEEEEEcCCCCCCChHHHHHHHHHHHHHH---cC--C
Confidence 569999995 8854 235689999999988776 674 89999999999999999999999988754 23 4
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhc-CCeeeccCC
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDTDFDGCMQLIREVTSE-LPIYLANSL 303 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~-~~~~~~ns~ 303 (526)
.+||++||||||.|+|++|+++|++|+||||++ ++..|+.+++.+||+|+.++++++++.+.+++++++ .++++++++
T Consensus 94 ~~vv~aSsGN~g~alA~aa~~~G~~~~iv~p~~-~~~~k~~~~~~~GA~V~~~~~~~~~a~~~a~~l~~~~~~~~~v~~~ 172 (372)
T 1p5j_A 94 AHFVCSSAGNAGMAAAYAARQLGVPATIVVPGT-TPALTIERLKNEGATCKVVGELLDEAFELAKALAKNNPGWVYIPPF 172 (372)
T ss_dssp CEEEECCSSHHHHHHHHHHHHHTCCEEEEECTT-CCHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHHSTTEEECCSS
T ss_pred CEEEEeCCCHHHHHHHHHHHHcCCcEEEEECCC-CCHHHHHHHHhcCCEEEEECCCHHHHHHHHHHHHHhcCCcEEeCCC
Confidence 789999999999999999999999999999997 799999999999999999999999999999999888 578888775
Q ss_pred -chhHHhHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCchHHHHHHhCCc
Q 009781 304 -NSLRLEGQKTAAIEILQQFDWEVPDWVIVPGGNLGNIYAFYKGFQMCKELGLVDRIPRLVCAQAANANPLYLYYKSGWK 382 (526)
Q Consensus 304 -Np~~i~G~~T~a~EI~eQl~~~~pd~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prvi~Vq~~~~~~l~~a~~~G~~ 382 (526)
||.+++||+|+++||++|++. .||+||+|+|+||+++|++++|++ +|+ |.+|||+||+++++++.++++.|+
T Consensus 173 ~n~~~~~G~~t~~~Ei~~ql~~-~~d~vvvpvG~GG~~~Gi~~~~k~---~~~--p~~~vigVe~~~~~~~~~~~~~g~- 245 (372)
T 1p5j_A 173 DDPLIWEGHASIVKELKETLWE-KPGAIALSVGGGGLLCGVVQGLQE---CGW--GDVPVIAMETFGAHSFHAATTAGK- 245 (372)
T ss_dssp CCHHHHHHHTHHHHHHHHHCSS-CCSEEEEECSSSHHHHHHHHHHHH---TTC--TTCCEEEEEETTSCHHHHHHHHTS-
T ss_pred CCHHHHhhHHHHHHHHHHHcCC-CCCEEEEecCCchHHHHHHHHHHH---hCC--CCceEEEEecCCChHHHHHHHcCC-
Confidence 799999999999999999973 699999999999999999998874 555 567999999999999999999885
Q ss_pred cccccCCccccccccccCCCccHHHHHHHHHhCCCeEEEeCHHHHHHHHHHH-HhcCCeecchHHHHHHHHHH-----HH
Q 009781 383 DFKPVRANTTFASAIQIGDPVSIDRAVYALKNCDGIVEEATEEELMDVSAQA-DSTGMFVCPHTGVALSALIK-----LR 456 (526)
Q Consensus 383 ~~~~~~~~~Tia~~i~i~~P~~~~~~l~~l~~~~g~~v~Vsd~ei~~A~~~l-~~~Gi~veP~sA~alAal~~-----l~ 456 (526)
........|++++|+++.+. +..++.++...+.++.|+|+|++++++++ +++|+++||++|+++||+.+ +.
T Consensus 246 -~~~~~~~~tia~gl~~~~~~--~~~~~~~~~~~~~~~~Vsd~e~~~a~~~l~~~eGi~~epssa~alaa~~~~~~~~l~ 322 (372)
T 1p5j_A 246 -LVSLPKITSVAKALGVKTVG--SQALKLFQEHPIFSEVISDQEAVAAIEKFVDDEKILVEPACGAALAAVYSHVIQKLQ 322 (372)
T ss_dssp -CCCCSCCCCSCGGGCCSSCC--HHHHHHHHHSCEEEEEECHHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHTTHHHHHH
T ss_pred -ceecCCCceeecccCCCCCC--HHHHHHHhhcCCEEEEECHHHHHHHHHHHHHHcCCeechhHHHHHHHHHHhhHHHHh
Confidence 23344457999999876554 34566677788889999999999999986 78999999999999999773 44
Q ss_pred HcCC-CCCCCeEEEEECCCCCCchHHHHh
Q 009781 457 CKGV-IGKTDKTVVVSTAHGLKFTQSKID 484 (526)
Q Consensus 457 ~~g~-i~~~~~vVvv~TG~g~K~~~~~~~ 484 (526)
++|. +.++++||+|+||++..+.+.+.+
T Consensus 323 ~~g~~~~~~~~Vv~i~tgg~~~~~~~~~~ 351 (372)
T 1p5j_A 323 LEGNLRTPLPSLVVIVCGGSNISLAQLRA 351 (372)
T ss_dssp HTTSSCSSCSCEEEECCBCSSCCHHHHHH
T ss_pred hccccCCCCCeEEEEECCCCCCCHHHHHH
Confidence 5564 467889999999987565655433
No 11
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=100.00 E-value=1.3e-52 Score=438.64 Aligned_cols=317 Identities=16% Similarity=0.193 Sum_probs=262.0
Q ss_pred CCCccccccccCCCCCccchhcccccCCCceecccccccccCCCcEEEEecCCCCCCchhhhhHHHHHHHHHHHHhcCCC
Q 009781 144 GSGVWSKKEWVLPEIDSDDIVSAFEGNSNLFWAERFGKEFLQMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLKRMNKP 223 (526)
Q Consensus 144 ~~~iwr~~~~~lP~~~~~~~vsl~eG~TPL~~~~~l~~~~lg~~~l~lK~E~~nPTGSFKDRga~~~v~~a~~~~~~g~~ 223 (526)
.++||||.++ +|.. ....++|||++++++++. +|. +||+|+|++|||||||||++.+++..+.+ .|
T Consensus 27 ~~~l~r~~~~-~~~~------~~~~~~TPL~~~~~l~~~-~g~-~v~~K~E~~~ptGSfK~Rga~~~i~~a~~---~g-- 92 (364)
T 4h27_A 27 GQQMGRGSEF-MMSG------EPLHVKTPIRDSMALSKM-AGT-SVYLKMDSAQPSGSFKIRGIGHFCKRWAK---QG-- 92 (364)
T ss_dssp ---------------------CCSSCCCCEEEEHHHHHH-HTS-EEEEEEGGGSTTSBTHHHHHHHHHHHHHH---TT--
T ss_pred CcccchhHHh-hhhc------CCCCCcCCeEEChhhHHH-hCC-EEEEEeCCCCCCCCHHHHHHHHHHHHHHh---cC--
Confidence 4689999996 6632 234679999999998876 776 89999999999999999999999988753 33
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcC-CeeeccC
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDTDFDGCMQLIREVTSEL-PIYLANS 302 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~-~~~~~ns 302 (526)
..+|+++||||||+|+|++|+++|++|+||||++ ++..|+.+++.+||+|+.++++++++.+.+++++++. +++++++
T Consensus 93 ~~~vv~aSsGN~g~alA~aa~~~G~~~~iv~p~~-~~~~k~~~~~~~GA~Vv~v~~~~~~a~~~a~~l~~~~~~~~~~~~ 171 (364)
T 4h27_A 93 CAHFVCSSSGNAGMAAAYAARQLGVPATIVVPGT-TPALTIERLKNEGATVKVVGELLDEAFELAKALAKNNPGWVYIPP 171 (364)
T ss_dssp CCEEEECCSSHHHHHHHHHHHHHTCCEEEEEETT-SCHHHHHHHHTTTCEEEEECSSTTHHHHHHHHHHHHSTTEEEECS
T ss_pred CCEEEEeCCChHHHHHHHHHHHhCCceEEEECCC-CCHHHHHHHHHcCCEEEEECCCHHHHHHHHHHHHHhCCCeEEeCC
Confidence 4689999999999999999999999999999997 7899999999999999999999999999999999987 8888888
Q ss_pred C-chhHHhHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCchHHHHHHhCC
Q 009781 303 L-NSLRLEGQKTAAIEILQQFDWEVPDWVIVPGGNLGNIYAFYKGFQMCKELGLVDRIPRLVCAQAANANPLYLYYKSGW 381 (526)
Q Consensus 303 ~-Np~~i~G~~T~a~EI~eQl~~~~pd~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prvi~Vq~~~~~~l~~a~~~G~ 381 (526)
+ ||.+++||+|+++||++|+++ .||+||+|+|+||+++|++++|++ +++ +..++|+||+++++++.++++.|.
T Consensus 172 ~~np~~~~G~~t~~~Ei~~q~~~-~~D~vvvpvG~GG~~aGi~~~~k~---~~~--p~~~vigVe~~~~~~~~~~~~~g~ 245 (364)
T 4h27_A 172 FDDPLIWEGHASIVKELKETLWE-KPGAIALSVGGGGLLCGVVQGLQE---VGW--GDVPVIAMETFGAHSFHAATTAGK 245 (364)
T ss_dssp SCSHHHHHHHTHHHHHHHHHCSS-CCSEEEEECSSSHHHHHHHHHHHH---TTC--TTCCEEEEEETTSCHHHHHHHHTS
T ss_pred CCCHHHHHHHHHHHHHHHHHhCC-CCCEEEEcCCccHHHHHHHHHHHH---hCC--CCCeEEEEecCCChHHHHHHHCCC
Confidence 5 899999999999999999985 699999999999999999998874 454 445899999999999999999986
Q ss_pred ccccccCCccccccccccCCCccHHHHHHHHHhCCCeEEEeCHHHHHHHHHHH-HhcCCeecchHHHHHHHHH-----HH
Q 009781 382 KDFKPVRANTTFASAIQIGDPVSIDRAVYALKNCDGIVEEATEEELMDVSAQA-DSTGMFVCPHTGVALSALI-----KL 455 (526)
Q Consensus 382 ~~~~~~~~~~Tia~~i~i~~P~~~~~~l~~l~~~~g~~v~Vsd~ei~~A~~~l-~~~Gi~veP~sA~alAal~-----~l 455 (526)
. ...+...|++++|+++.+. +..+..++++.+..+.|+|+|++++++++ +++|+++||++|+++||+. ++
T Consensus 246 ~--~~~~~~~tia~gl~~~~~~--~~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~~egi~~eps~aaalaa~~~~k~~~l 321 (364)
T 4h27_A 246 L--VSLPKITSVAKALGVKTVG--AQALKLFQEHPIFSEVISDQEAVAAIEKFVDDEKILVEPACGAALAAVYSHVIQKL 321 (364)
T ss_dssp C--CCCSCCCCSCGGGCCSSCC--HHHHHHHTTSCEEEEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTTHHHHH
T ss_pred c--ccCCCCCcHHHHhCCCCCc--HHHHHHHHhcCCEEEEECHHHHHHHHHHHHHHCCCeEcccHHHHHHHHHhhhhHHh
Confidence 3 3334567899999876543 34567778888888899999999999985 7899999999999999984 67
Q ss_pred HHcCCCCC-CCeEEEEECCCCCCchHHHHhh
Q 009781 456 RCKGVIGK-TDKTVVVSTAHGLKFTQSKIDY 485 (526)
Q Consensus 456 ~~~g~i~~-~~~vVvv~TG~g~K~~~~~~~~ 485 (526)
.++|.+.+ +++||+|+||++..+.+.+..+
T Consensus 322 ~~~g~~~~~~~~Vv~v~tGG~~~d~~~l~~~ 352 (364)
T 4h27_A 322 QLEGNLRTPLPSLVVIVCGGSNISLAQLRAL 352 (364)
T ss_dssp HHTTSSCSSCCEEEEEECBCSSCCHHHHHHH
T ss_pred hhccCcCCCCCeEEEEECCCCCCCHHHHHHH
Confidence 77887775 6899999999875666665443
No 12
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.5e-51 Score=418.20 Aligned_cols=297 Identities=18% Similarity=0.218 Sum_probs=257.4
Q ss_pred cCCCceecccccccccCCCcEEEEecCCCCCCchhhhhHHHHHHHHHHHHhcCCCceEEEEeccchHHHHHHHHHHhcCC
Q 009781 169 GNSNLFWAERFGKEFLQMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLKRMNKPVIGVGCASTGDTSAALSAYCASAGV 248 (526)
Q Consensus 169 G~TPL~~~~~l~~~~lg~~~l~lK~E~~nPTGSFKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSGN~g~AlAa~aa~~Gi 248 (526)
++|||++++++++. +|. +||+|+|++|||||||||++.+++..+.+ .| ..+|+++||||||.|+|++|+++|+
T Consensus 6 ~~TPL~~~~~l~~~-~g~-~v~~K~E~~~ptgS~K~R~a~~~l~~a~~---~g--~~~vv~~ssGN~g~alA~~a~~~G~ 78 (318)
T 2rkb_A 6 VVTPLLESWALSQV-AGM-PVFLKCENVQPSGSFKIRGIGHFCQEMAK---KG--CRHLVCSSGGNAGIAAAYAARKLGI 78 (318)
T ss_dssp CCCCEEEEHHHHHH-HTS-CEEEEEGGGSTTSBTTHHHHHHHHHHHHH---TT--CCEEEECCCSHHHHHHHHHHHHHTC
T ss_pred ccCCceehHhhHHH-hCC-eEEEEecCCCCCCCHHHHHHHHHHHHHHH---cC--CCEEEEECCchHHHHHHHHHHHcCC
Confidence 57999999988776 674 79999999999999999999999988754 23 4789999999999999999999999
Q ss_pred CEEEEcCCCcCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCCeeeccCC-chhHHhHHHHHHHHHHHHcCCCCC
Q 009781 249 PSIVFLPANKISIAQLVQPIANGAFVLSLDTDFDGCMQLIREVTSELPIYLANSL-NSLRLEGQKTAAIEILQQFDWEVP 327 (526)
Q Consensus 249 ~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~~~~~ns~-Np~~i~G~~T~a~EI~eQl~~~~p 327 (526)
+|+||||++ ++..|+.+|+.+||+|+.++++++++.+.+++++++.++++++++ ||.+++||+|+++||++|+++ .|
T Consensus 79 ~~~i~~p~~-~~~~k~~~~~~~Ga~V~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~n~~~~~g~~t~~~Ei~~q~~~-~~ 156 (318)
T 2rkb_A 79 PATIVLPES-TSLQVVQRLQGEGAEVQLTGKVWDEANLRAQELAKRDGWENVPPFDHPLIWKGHASLVQELKAVLRT-PP 156 (318)
T ss_dssp CEEEEECTT-CCHHHHHHHHHTTCEEEECCSSHHHHHHHHHHHHHSTTEEECCSSCSHHHHHHHHHHHHHHHHHSSS-CC
T ss_pred CEEEEECCC-CcHHHHHHHHhcCCEEEEECCCHHHHHHHHHHHHHhcCCEEeCCCCChhhccchhHHHHHHHHhcCC-CC
Confidence 999999997 789999999999999999999999999999999988888888875 899999999999999999984 69
Q ss_pred cEEEEeCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCchHHHHHHhCCccccccCCccccccccccCCCccHHH
Q 009781 328 DWVIVPGGNLGNIYAFYKGFQMCKELGLVDRIPRLVCAQAANANPLYLYYKSGWKDFKPVRANTTFASAIQIGDPVSIDR 407 (526)
Q Consensus 328 d~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prvi~Vq~~~~~~l~~a~~~G~~~~~~~~~~~Tia~~i~i~~P~~~~~ 407 (526)
|+||+|+|+||+++|++++|++ +|+ |.+|||+||+++++++.++++.|+ +...+...|++++|+.+.+. +.
T Consensus 157 d~vvvpvG~GG~~~Gi~~~~k~---~~~--~~~~vi~ve~~~~~~~~~~~~~g~--~~~~~~~~t~a~gl~~~~~~--~~ 227 (318)
T 2rkb_A 157 GALVLAVGGGGLLAGVVAGLLE---VGW--QHVPIIAMETHGAHCFNAAITAGK--LVTLPDITSVAKSLGAKTVA--AR 227 (318)
T ss_dssp SEEEEECSSSHHHHHHHHHHHH---HTC--TTSCEEEEEETTBCHHHHHHHHTS--CCBCSCCCSSCGGGCCSBCC--HH
T ss_pred CEEEEeeCCCcHHHHHHHHHHH---hCC--CCCEEEEEecCCChHHHHHHHcCC--cccCCCCCceecccCCCCCC--HH
Confidence 9999999999999999998874 465 667999999999999999999985 23344557999999865543 34
Q ss_pred HHHHHHhCCCeEEEeCHHHHHHHHHHH-HhcCCeecchHHHHHHHHH-----HHHHcCC-CCCCCeEEEEECCCCCCchH
Q 009781 408 AVYALKNCDGIVEEATEEELMDVSAQA-DSTGMFVCPHTGVALSALI-----KLRCKGV-IGKTDKTVVVSTAHGLKFTQ 480 (526)
Q Consensus 408 ~l~~l~~~~g~~v~Vsd~ei~~A~~~l-~~~Gi~veP~sA~alAal~-----~l~~~g~-i~~~~~vVvv~TG~g~K~~~ 480 (526)
.++.++...+.++.|+|+|++++++++ +++|+++||++|+++||+. ++.++|. +.++++||+|+||++..+.+
T Consensus 228 ~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~eps~a~a~aa~~~~~~~~~~~~g~~~~~~~~vv~i~tgg~~~~~~ 307 (318)
T 2rkb_A 228 ALECMQVCKIHSEVVEDTEAVSAVQQLLDDERMLVEPACGAALAAIYSGLLRRLQAEGCLPPSLTSVVVIVCGGNNINSR 307 (318)
T ss_dssp HHHHHHHSCEEEEEECHHHHHHHHHHHHHHHCBCCCHHHHHHHHHHHTSHHHHHHHTTSSCSSCSCEEEEECBCSSCCHH
T ss_pred HHHHHHHcCCEEEEECHHHHHHHHHHHHHhcCcEEchhHHHHHHHHHHhhHHHHhhccccCCCCCeEEEEECCCCCCCHH
Confidence 566677778889999999999999986 7899999999999999976 3445565 56789999999998867766
Q ss_pred HHH
Q 009781 481 SKI 483 (526)
Q Consensus 481 ~~~ 483 (526)
.+.
T Consensus 308 ~l~ 310 (318)
T 2rkb_A 308 ELQ 310 (318)
T ss_dssp HHH
T ss_pred HHH
Confidence 643
No 13
>3iau_A Threonine deaminase; pyridoxal phosphate, amino-acid biosynthesis, defensive PROT jasmonic acid pathway, jasmonic acid,structural genomics; HET: LLP 15P; 2.35A {Solanum lycopersicum}
Probab=100.00 E-value=5e-51 Score=427.04 Aligned_cols=293 Identities=16% Similarity=0.155 Sum_probs=259.1
Q ss_pred ccccCCCceecccccccccCCCcEEEEecCCCCCCchhhhhHHHHHHHHHHHHhcCCCceEEEEeccchHHHHHHHHHHh
Q 009781 166 AFEGNSNLFWAERFGKEFLQMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLKRMNKPVIGVGCASTGDTSAALSAYCAS 245 (526)
Q Consensus 166 l~eG~TPL~~~~~l~~~~lg~~~l~lK~E~~nPTGSFKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSGN~g~AlAa~aa~ 245 (526)
-..++|||++++++++. +|. +||+|+|++|||||||||++.+++..+.+.. + ..+|+++||||||.|+|++|++
T Consensus 56 ~~i~~TPL~~l~~l~~~-~g~-~i~~K~E~~~ptgSfKdRga~~~i~~l~~~~--~--~~~vv~assGN~g~a~A~aa~~ 129 (366)
T 3iau_A 56 DVAIESPLELAEKLSDR-LGV-NFYIKREDKQRVFSFKLRGAYNMMSNLSREE--L--DKGVITASAGNHAQGVALAGQR 129 (366)
T ss_dssp GTCCCCCEEECHHHHHH-HTS-EEEEEEGGGSTTSBTTHHHHHHHHHTSCHHH--H--HHCEEEECSSHHHHHHHHHHHH
T ss_pred hhcCCCCcEEhhhhhHh-hCC-EEEEEecCCCCCcchHHHHHHHHHHHHHHhC--C--CCEEEEeCCCHHHHHHHHHHHH
Confidence 34589999999998877 776 8999999999999999999999998764321 1 2569999999999999999999
Q ss_pred cCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCCeeeccCC-chhHHhHHHHHHHHHHHHcCC
Q 009781 246 AGVPSIVFLPANKISIAQLVQPIANGAFVLSLDTDFDGCMQLIREVTSELPIYLANSL-NSLRLEGQKTAAIEILQQFDW 324 (526)
Q Consensus 246 ~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~~~~~ns~-Np~~i~G~~T~a~EI~eQl~~ 324 (526)
+|++|+||||++ ++..|+.+++.+||+|+.+++++++|++.+++++++.++++++++ ||..++||+|+++||++|++
T Consensus 130 ~G~~~~iv~P~~-~~~~k~~~~~~~GA~V~~v~~~~~~~~~~a~~~~~~~~~~~i~~~~n~~~i~g~~t~~~Ei~~q~~- 207 (366)
T 3iau_A 130 LNCVAKIVMPTT-TPQIKIDAVRALGGDVVLYGKTFDEAQTHALELSEKDGLKYIPPFDDPGVIKGQGTIGTEINRQLK- 207 (366)
T ss_dssp TTCCEEEEECTT-CCHHHHHHHHHTTCEEEECCSSHHHHHHHHHHHHHHHTCEECCSSSSHHHHHHHHHHHHHHHHHCC-
T ss_pred hCCceEEEeCCC-CCHHHHHHHHHCCCeEEEECcCHHHHHHHHHHHHHhcCCEecCCCCChHHHHHHHHHHHHHHHhcC-
Confidence 999999999996 799999999999999999999999999999999988888888885 79999999999999999995
Q ss_pred CCCcEEEEeCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCchHHHHHHhCCccccccCCccccccccccCCCcc
Q 009781 325 EVPDWVIVPGGNLGNIYAFYKGFQMCKELGLVDRIPRLVCAQAANANPLYLYYKSGWKDFKPVRANTTFASAIQIGDPVS 404 (526)
Q Consensus 325 ~~pd~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prvi~Vq~~~~~~l~~a~~~G~~~~~~~~~~~Tia~~i~i~~P~~ 404 (526)
.||+||+|+|+||+++|++++|+++ + +.+|+|+||+.+++++.++++.|.. .+.....|++++|+++.|..
T Consensus 208 -~~d~vvvpvG~GG~~~Gi~~~~k~~---~---~~~~vigVe~~~~~~l~~~~~~g~~--~~~~~~~tia~gl~~~~~~~ 278 (366)
T 3iau_A 208 -DIHAVFIPVGGGGLIAGVATFFKQI---A---PNTKIIGVEPYGAASMTLSLHEGHR--VKLSNVDTFADGVAVALVGE 278 (366)
T ss_dssp -SEEEEEEECSSSHHHHHHHHHHHHH---S---TTSEEEEEEEGGGCHHHHHHHHTSC--CEESCCCCSSGGGCCSSCCH
T ss_pred -CCCEEEEccCchHHHHHHHHHHHHh---C---CCCeEEEEeecCChHHHHHHHcCCC--CcCCCccchhhhhcCCCCcH
Confidence 7999999999999999999998854 2 5679999999999999999999963 33445689999999887764
Q ss_pred HHHHHHHHHhCCCeEEEeCHHHHHHHHHHH-HhcCCeecchHHHHHHHHHHHHHcCCCCCCCeEEEEECCCCCCc
Q 009781 405 IDRAVYALKNCDGIVEEATEEELMDVSAQA-DSTGMFVCPHTGVALSALIKLRCKGVIGKTDKTVVVSTAHGLKF 478 (526)
Q Consensus 405 ~~~~l~~l~~~~g~~v~Vsd~ei~~A~~~l-~~~Gi~veP~sA~alAal~~l~~~g~i~~~~~vVvv~TG~g~K~ 478 (526)
..+..+++..+.++.|+|+|++++++++ +++|+++||+||+++||++++.+++.+. +++||+++||++.+.
T Consensus 279 --~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~ep~sa~alaa~~~~~~~~~~~-g~~Vv~i~tGgn~d~ 350 (366)
T 3iau_A 279 --YTFAKCQELIDGMVLVANDGISAAIKDVYDEGRNILETSGAVAIAGAAAYCEFYKIK-NENIVAIASGANMDF 350 (366)
T ss_dssp --HHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHTTCC-SCEEEEEECBCCCCG
T ss_pred --HHHHHHHhcCCCceeECHHHHHHHHHHHHHHcCcEEcHHHHHHHHHHHHHHHhcCCC-CCeEEEEeCCCCCCH
Confidence 3456677888999999999999999986 7799999999999999999998877654 789999999998864
No 14
>2gn0_A Threonine dehydratase catabolic; TDCB, biodegradative threonine deaminase, PLP, threonine DEH L-threonine metabolism; HET: LLP; 1.70A {Salmonella typhimurium} PDB: 2gn1_A* 2gn2_A*
Probab=100.00 E-value=5.9e-51 Score=422.79 Aligned_cols=295 Identities=18% Similarity=0.216 Sum_probs=256.2
Q ss_pred cccCCCceecccccccccCCCcEEEEecCCCCCCchhhhhHHHHHHHHHHHHhcCCCceEEEEeccchHHHHHHHHHHhc
Q 009781 167 FEGNSNLFWAERFGKEFLQMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLKRMNKPVIGVGCASTGDTSAALSAYCASA 246 (526)
Q Consensus 167 ~eG~TPL~~~~~l~~~~lg~~~l~lK~E~~nPTGSFKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSGN~g~AlAa~aa~~ 246 (526)
..++|||++++++++. +|. +||+|+|++|||||||||++.+++..+.+.. + ..+|+++||||||.|+|++|+++
T Consensus 37 ~i~~TPL~~l~~l~~~-~g~-~i~~K~E~~~ptGSfKdR~a~~~i~~a~~~~--~--~~~vv~~ssGN~g~alA~aa~~~ 110 (342)
T 2gn0_A 37 KIYKTGMPRSNYFSER-CKG-EIFLKFENMQRTGSFKIRGAFNKLSSLTEAE--K--RKGVVACSAGNHAQGVSLSCAML 110 (342)
T ss_dssp TSCCCCCCBCHHHHHH-HTS-EEEEEEGGGSGGGBTHHHHHHHHHHHSCHHH--H--HTCEEEECSSHHHHHHHHHHHHH
T ss_pred hcCCCCceEchhhHHH-hCC-EEEEEEccCCCcCChHHHHHHHHHHHHHHhc--C--CCEEEEECCChHHHHHHHHHHHc
Confidence 4589999999988776 675 8999999999999999999999998874321 1 35799999999999999999999
Q ss_pred CCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCCeeeccCC-chhHHhHHHHHHHHHHHHcCCC
Q 009781 247 GVPSIVFLPANKISIAQLVQPIANGAFVLSLDTDFDGCMQLIREVTSELPIYLANSL-NSLRLEGQKTAAIEILQQFDWE 325 (526)
Q Consensus 247 Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~~~~~ns~-Np~~i~G~~T~a~EI~eQl~~~ 325 (526)
|++|+||||++ ++..|+.+++.+||+|+.++++++++.+.+++++++.++++++++ ||.+++||+|+++||++|++
T Consensus 111 G~~~~iv~p~~-~~~~k~~~~~~~GA~V~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~n~~~~~g~~t~~~Ei~~q~~-- 187 (342)
T 2gn0_A 111 GIDGKVVMPKG-APKSKVAATCDYSAEVVLHGDNFNDTIAKVSEIVETEGRIFIPPYDDPKVIAGQGTIGLEIMEDLY-- 187 (342)
T ss_dssp TCCEEEEECTT-SCHHHHHHHHHHSCEEEECCSSHHHHHHHHHHHHHHHCCEECCSSSSHHHHHHHHHHHHHHHHHCT--
T ss_pred CCCEEEEECCC-CCHHHHHHHHHcCCEEEEECCCHHHHHHHHHHHHHhcCCEEeCCCCCHHHHHHHHHHHHHHHHHcC--
Confidence 99999999997 799999999999999999999999999999999888888888886 69999999999999999998
Q ss_pred CCcEEEEeCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCchHHHHHHhCCccccccCCccccccccccCCCccH
Q 009781 326 VPDWVIVPGGNLGNIYAFYKGFQMCKELGLVDRIPRLVCAQAANANPLYLYYKSGWKDFKPVRANTTFASAIQIGDPVSI 405 (526)
Q Consensus 326 ~pd~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prvi~Vq~~~~~~l~~a~~~G~~~~~~~~~~~Tia~~i~i~~P~~~ 405 (526)
.||+||+|+|+||+++|++++|+++ + |.+|||+||+++++++.++|+.|+ ..+....+|++++|+++.|...
T Consensus 188 ~~d~vvvpvG~GG~~~Gi~~~~k~~---~---p~~~vigve~~~~~~~~~s~~~g~--~~~~~~~~t~a~gl~~~~~~~~ 259 (342)
T 2gn0_A 188 DVDNVIVPIGGGGLIAGIAIAIKSI---N---PTIKVIGVQAENVHGMAASYYTGE--ITTHRTTGTLADGCDVSRPGNL 259 (342)
T ss_dssp TCCEEEEECSSSHHHHHHHHHHHHH---C---TTSEEEEEEETTBCHHHHHHHHTS--CCCCCSSCCSCGGGCCSSCCHH
T ss_pred CCCEEEEecCCchHHHHHHHHHHHh---C---CCCeEEEEEeCCChhHHHHHHcCC--ccccCCCCccccccCCCCccHH
Confidence 5999999999999999999998864 2 678999999999999999999985 3333445799999998877654
Q ss_pred HHHHHHHHhCCCeEEEeCHHHHHHHHHHH-HhcCCeecchHHHHHHHHHHHHHcCCCCCCCeEEEEECCCCCCchHHH
Q 009781 406 DRAVYALKNCDGIVEEATEEELMDVSAQA-DSTGMFVCPHTGVALSALIKLRCKGVIGKTDKTVVVSTAHGLKFTQSK 482 (526)
Q Consensus 406 ~~~l~~l~~~~g~~v~Vsd~ei~~A~~~l-~~~Gi~veP~sA~alAal~~l~~~g~i~~~~~vVvv~TG~g~K~~~~~ 482 (526)
.+..+++..+.++.|+|+|++++++++ +++|+++||++|+++||++++.+.+.+ ++++||+|+||+ .++++.+
T Consensus 260 --~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~~gi~~epssa~alaa~~~~~~~~~~-~~~~Vv~i~tGg-~~d~~~~ 333 (342)
T 2gn0_A 260 --TYEIVRELVDDIVLVSEDEIRNSMIALIQRNKVITEGAGALACAALLSGKLDSHI-QNRKTVSIISGG-NIDLSRV 333 (342)
T ss_dssp --HHHHHHHHCCEEEEECHHHHHHHHHHHHHHHCBCCCTGGGHHHHHHHHTTTHHHH-TTSEEEEEECBC-CCCHHHH
T ss_pred --HHHHHHHcCCEEEEECHHHHHHHHHHHHHHcCeEEcHHHHHHHHHHHHhhhhccC-CCCEEEEEECCC-CCCHHHH
Confidence 355567788999999999999999986 779999999999999999887553223 688999999995 5666654
No 15
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=100.00 E-value=1.6e-50 Score=420.28 Aligned_cols=299 Identities=18% Similarity=0.177 Sum_probs=252.5
Q ss_pred ccCCCceecccccccccCCCcEEEEecCCCCCCchhhhhHHHHHHHHHHHHhcCCCceEEEEeccchHHHHHHHHHHhcC
Q 009781 168 EGNSNLFWAERFGKEFLQMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLKRMNKPVIGVGCASTGDTSAALSAYCASAG 247 (526)
Q Consensus 168 eG~TPL~~~~~l~~~~lg~~~l~lK~E~~nPTGSFKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSGN~g~AlAa~aa~~G 247 (526)
.++|||++++++++. +|. +||+|+|++|||||||||++.+++..+.+.... ++..+|+++|+||||.|+|++|+++|
T Consensus 23 i~~TPL~~~~~l~~~-~g~-~i~~K~E~~~ptGSfK~Rga~~~i~~a~~~g~~-~~~~~vv~~SsGNhg~a~A~aa~~~G 99 (346)
T 3l6b_A 23 IHLTPVLTSSILNQL-TGR-NLFFKCELFQKTGSFKIRGALNAVRSLVPDALE-RKPKAVVTHSSGNHGQALTYAAKLEG 99 (346)
T ss_dssp SCCCCEECCHHHHHH-HTS-EEEEEEGGGSGGGBTHHHHHHHHHHTTC------CCCSCEEEECSSHHHHHHHHHHHHTT
T ss_pred cCCCCeEEchhhHHH-hCC-eEEEEeCCCCCCCCcHHHHHHHHHHHHHHhccc-cCCCEEEEeCCCHHHHHHHHHHHHhC
Confidence 478999999988776 674 899999999999999999999999987543211 12356999999999999999999999
Q ss_pred CCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCCeeeccCC-chhHHhHHHHHHHHHHHHcCCCC
Q 009781 248 VPSIVFLPANKISIAQLVQPIANGAFVLSLDTDFDGCMQLIREVTSELPIYLANSL-NSLRLEGQKTAAIEILQQFDWEV 326 (526)
Q Consensus 248 i~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~~~~~ns~-Np~~i~G~~T~a~EI~eQl~~~~ 326 (526)
++|+||||++ ++..|+.+++.+||+|+.++++++++.+.+++++++.+.++++++ ||..++||+|+++||++|++ .
T Consensus 100 ~~~~iv~p~~-~~~~k~~~~~~~GA~V~~v~~~~~~~~~~a~~l~~~~~~~~i~~~~np~~~~g~~t~~~Ei~~q~~--~ 176 (346)
T 3l6b_A 100 IPAYIVVPQT-APDCKKLAIQAYGASIVYCEPSDESRENVAKRVTEETEGIMVHPNQEPAVIAGQGTIALEVLNQVP--L 176 (346)
T ss_dssp CCEEEEEETT-SCHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHTCEECCSSSCHHHHHHHHHHHHHHHHHST--T
T ss_pred CCEEEEECCC-CCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHhcCCEEECCCCChHHHHHHHHHHHHHHHhCC--C
Confidence 9999999997 789999999999999999999999999999999988888888764 89999999999999999997 6
Q ss_pred CcEEEEeCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCchHHHHHHhCCccccccCCccccccccccCCCccHH
Q 009781 327 PDWVIVPGGNLGNIYAFYKGFQMCKELGLVDRIPRLVCAQAANANPLYLYYKSGWKDFKPVRANTTFASAIQIGDPVSID 406 (526)
Q Consensus 327 pd~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prvi~Vq~~~~~~l~~a~~~G~~~~~~~~~~~Tia~~i~i~~P~~~~ 406 (526)
||+||+|+|+||+++|++++|+++ + |.+|||+||+++++++.+++..|.....+ ...+|++++|+...+.+
T Consensus 177 ~d~vvv~vG~GG~~aGi~~~~k~~---~---p~~~vigVe~~~~~~~~~s~~~g~~~~~~-~~~~tia~gl~~~~g~~-- 247 (346)
T 3l6b_A 177 VDALVVPVGGGGMLAGIAITVKAL---K---PSVKVYAAEPSNADDCYQSKLKGKLMPNL-YPPETIADGVKSSIGLN-- 247 (346)
T ss_dssp CCEEEEECSSSHHHHHHHHHHHHH---C---TTSEEEEEEEGGGCHHHHHHHHTSCCCCS-SCCCCSCGGGCSCCCTT--
T ss_pred CCEEEEecCccHHHHHHHHHHHHh---C---CCCEEEEEecCCCHHHHHHHHcCCccccC-CCCCchhhhccCCCcHH--
Confidence 999999999999999999998864 2 66799999999999999999998632211 23579999998443333
Q ss_pred HHHHHHHhCCCeEEEeCHHHHHHHHHHH-HhcCCeecchHHHHHHHHHHHHHcCCCCCCCeEEEEECCCCCCchHHHH
Q 009781 407 RAVYALKNCDGIVEEATEEELMDVSAQA-DSTGMFVCPHTGVALSALIKLRCKGVIGKTDKTVVVSTAHGLKFTQSKI 483 (526)
Q Consensus 407 ~~l~~l~~~~g~~v~Vsd~ei~~A~~~l-~~~Gi~veP~sA~alAal~~l~~~g~i~~~~~vVvv~TG~g~K~~~~~~ 483 (526)
.+..+++..+.++.|+|+|++++++++ +++|+++||++|+++||+++...++...++++||+++|| |.++++.++
T Consensus 248 -~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~~gi~~epssa~alaa~~~~~~~~~~~~~~~Vv~i~sG-G~~d~~~~~ 323 (346)
T 3l6b_A 248 -TWPIIRDLVDDIFTVTEDEIKCATQLVWERMKLLIEPTAGVGVAAVLSQHFQTVSPEVKNICIVLSG-GNVDLTSSI 323 (346)
T ss_dssp -HHHHHHHHCCEEEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHSGGGGGSCTTCCEEEEEECB-CCCCTTGGG
T ss_pred -HHHHHHHcCCeEEEECHHHHHHHHHHHHHHCCcEEcHHHHHHHHHHHHhhhhhccCCCCeEEEEcCC-CCCCHHHHH
Confidence 334456678889999999999999986 779999999999999999875544444568899999998 678877733
No 16
>4d9i_A Diaminopropionate ammonia-lyase; fold type II PLP-dependent enzyme, tryptophan synthase beta like PLP-dependent enzymes superfamily; HET: IT1; 2.00A {Escherichia coli} PDB: 4d9g_A* 4d9n_A* 4d9k_A* 4d9m_A*
Probab=100.00 E-value=5.3e-50 Score=423.70 Aligned_cols=306 Identities=14% Similarity=0.133 Sum_probs=260.4
Q ss_pred cCCCceecccccccccCCCcEEEEecCCC-CCCchhhhhHHHHHHHHHHHHhcC--------------CCce-EEEEecc
Q 009781 169 GNSNLFWAERFGKEFLQMNDLWVKHCGIS-HTGSFKDLGMTVLVSQVNRLKRMN--------------KPVI-GVGCAST 232 (526)
Q Consensus 169 G~TPL~~~~~l~~~~lg~~~l~lK~E~~n-PTGSFKDRga~~~v~~a~~~~~~g--------------~~~~-~Vv~aSS 232 (526)
+.|||++++++++. +|+.+||+|+|++| ||||||||++.+++..+.+. +.| .+.. +|+++|+
T Consensus 43 ~~TPL~~~~~l~~~-~g~~~i~~K~E~~~~ptgSfK~Rga~~~i~~~~~~-~~G~~~~~l~~e~l~~~~~~~~~vv~aSs 120 (398)
T 4d9i_A 43 RPTPLCALDDLANL-FGVKKILVKDESKRFGLNAFXMLGGAYAIAQLLCE-KYHLDIETLSFEHLKNAIGEKMTFATTTD 120 (398)
T ss_dssp CCCCEEECHHHHHH-HTSSEEEEEEGGGSTTTTBSTHHHHHHHHHHHHHH-HHTCCGGGCCHHHHHHCCSCCCEEEEECS
T ss_pred CCCCceehHHHHHH-hCCCcEEEEECCCCCCCCcchhhhhHHHHHHHHHH-hhcccccccchhhhhhhccCCCEEEEECC
Confidence 68999999998877 78668999999999 99999999999999988321 111 2245 8999999
Q ss_pred chHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCCeeeccC-----Cc---
Q 009781 233 GDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDTDFDGCMQLIREVTSELPIYLANS-----LN--- 304 (526)
Q Consensus 233 GN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~~~~~ns-----~N--- 304 (526)
||||.|+|++|+++|++|+||||++ ++..|+.+++.+||+|+.++++++++.+.+++++++.+++++++ ++
T Consensus 121 GNhg~a~A~aa~~~G~~~~iv~p~~-~~~~k~~~~~~~GA~Vv~v~~~~~~a~~~a~~~~~~~g~~~v~~~~~~g~~~~~ 199 (398)
T 4d9i_A 121 GNHGRGVAWAAQQLGQNAVIYMPKG-SAQERVDAILNLGAECIVTDMNYDDTVRLTMQHAQQHGWEVVQDTAWEGYTKIP 199 (398)
T ss_dssp SHHHHHHHHHHHHHTCEEEEEECTT-CCHHHHHHHHTTTCEEEECSSCHHHHHHHHHHHHHHHTCEECCSSCBTTBCHHH
T ss_pred CHHHHHHHHHHHHcCCCEEEEEeCC-CCHHHHHHHHHcCCEEEEECCCHHHHHHHHHHHHHHcCCEEecCcccCCcCCCC
Confidence 9999999999999999999999997 78999999999999999999999999999999998888888884 42
Q ss_pred hhHHhHHHHHHHHHHHHcCC--CCCcEEEEeCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCchHHHHHHhCCc
Q 009781 305 SLRLEGQKTAAIEILQQFDW--EVPDWVIVPGGNLGNIYAFYKGFQMCKELGLVDRIPRLVCAQAANANPLYLYYKSGWK 382 (526)
Q Consensus 305 p~~i~G~~T~a~EI~eQl~~--~~pd~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prvi~Vq~~~~~~l~~a~~~G~~ 382 (526)
|..++||+|+++||++|+++ ..||+||+|+|+||+++|++++|+++. |. +.+|||+||+++++++.++++.|..
T Consensus 200 ~~~~~G~~t~~~Ei~~q~~~~g~~~d~vvvpvG~GG~~aGi~~~~k~~~--~~--~~~~vigVep~~~~~~~~s~~~g~~ 275 (398)
T 4d9i_A 200 TWIMQGYATLADEAVEQMREMGVTPTHVLLQAGVGAMAGGVLGYLVDVY--SP--QNLHSIIVEPDKADCIYRSGVKGDI 275 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCSEEEEECSSSHHHHHHHHHHHHHH--CT--TSCEEEEEEETTSCHHHHHHHHTSC
T ss_pred chhhhhHHHHHHHHHHHhhhcCCCCCEEEEecCccHHHHHHHHHHHHhc--CC--CCCEEEEEEeCCCchHHHHHHcCCc
Confidence 78999999999999999863 239999999999999999999997652 32 5689999999999999999998863
Q ss_pred cccccC-CccccccccccCCCccHHHHHHHHHhCCCeEEEeCHHHHHHHHHHH-HhcC----CeecchHHHHHHHHHHH-
Q 009781 383 DFKPVR-ANTTFASAIQIGDPVSIDRAVYALKNCDGIVEEATEEELMDVSAQA-DSTG----MFVCPHTGVALSALIKL- 455 (526)
Q Consensus 383 ~~~~~~-~~~Tia~~i~i~~P~~~~~~l~~l~~~~g~~v~Vsd~ei~~A~~~l-~~~G----i~veP~sA~alAal~~l- 455 (526)
.+.. ..+|++++|+++.|... .+..++++.+.++.|+|+|++++++++ +++| +++||+||+++||++++
T Consensus 276 --~~~~~~~~tia~gl~~~~p~~~--~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~eG~~~~i~~epssa~alaa~~~~~ 351 (398)
T 4d9i_A 276 --VNVGGDMATIMAGLACGEPNPL--GWEILRNCATQFISCQDSVAALGMRVLGNPYGNDPRIISGESGAVGLGVLAAVH 351 (398)
T ss_dssp --CCC------CCTTCCCSSCCHH--HHHHHHHHCCEEEEECTHHHHHHHHHHHSCSTTCCCCCCCHHHHHHHHHHHHHH
T ss_pred --eecCCCCCceeccccCCCCCHH--HHHHHHHcCCeEEEECHHHHHHHHHHHHHhhCCCCcEEECchHHHHHHHHHHhh
Confidence 2322 35799999998888753 456678888999999999999999987 6688 99999999999999887
Q ss_pred --------HHcCCCCCCCeEEEEECCCCCCchHHHHhhh
Q 009781 456 --------RCKGVIGKTDKTVVVSTAHGLKFTQSKIDYH 486 (526)
Q Consensus 456 --------~~~g~i~~~~~vVvv~TG~g~K~~~~~~~~~ 486 (526)
++++.+.++++||+++|| |.++++...++.
T Consensus 352 ~~~~~~~l~~~~~~~~~~~Vv~i~tG-G~~d~~~~~~~~ 389 (398)
T 4d9i_A 352 YHPQRQSLMEKLALNKDAVVLVISTE-GDTDVKHYREVV 389 (398)
T ss_dssp HSTTHHHHHHHTTCCTTCEEEEEECB-CCSSHHHHHHHH
T ss_pred hhhhhHHHHHhcCCCCCCEEEEEeCC-CCCCHHHHHHHH
Confidence 466778889999999998 689888754443
No 17
>1ve5_A Threonine deaminase; riken structural genomics/Pro initiative, RSGI, structural genomics, lyase; HET: PLP; 2.15A {Thermus thermophilus} SCOP: c.79.1.1
Probab=100.00 E-value=1.3e-50 Score=414.70 Aligned_cols=287 Identities=18% Similarity=0.195 Sum_probs=249.1
Q ss_pred ccccCCCceecccccccccCCCcEEEEecCCCCCCchhhhhHHHHHHHHHHHHhcCCCceEEEEeccchHHHHHHHHHHh
Q 009781 166 AFEGNSNLFWAERFGKEFLQMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLKRMNKPVIGVGCASTGDTSAALSAYCAS 245 (526)
Q Consensus 166 l~eG~TPL~~~~~l~~~~lg~~~l~lK~E~~nPTGSFKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSGN~g~AlAa~aa~ 245 (526)
..-++|||++++++++. +|. +||+|+|++|||||||||++.+++..+. + ..+|+++||||||.|+|++|++
T Consensus 16 ~~~~~TPL~~~~~l~~~-~g~-~i~~K~E~~~ptgSfKdR~a~~~i~~l~-----~--~~~vv~~ssGN~g~alA~~a~~ 86 (311)
T 1ve5_A 16 PYTHRTPLLTSRLLDGL-LGK-RLLLKAEHLQKTGSFKARGALSKALALE-----N--PKGLLAVSSGNHAQGVAYAAQV 86 (311)
T ss_dssp GGSCCCCEEECHHHHHH-TTS-EEEEEEGGGSGGGBTHHHHHHHHHHHSS-----S--CCCEEEECSSHHHHHHHHHHHH
T ss_pred ccCCCCCceechhhHHh-hCC-eEEEEecCCCCcCCcHHHHHHHHHHHhc-----C--CCeEEEECCCcHHHHHHHHHHH
Confidence 34579999999988776 675 8999999999999999999999988764 2 3579999999999999999999
Q ss_pred cCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCCeeeccCC-chhHHhHHHHHHHHHHHHcC-
Q 009781 246 AGVPSIVFLPANKISIAQLVQPIANGAFVLSLDTDFDGCMQLIREVTSELPIYLANSL-NSLRLEGQKTAAIEILQQFD- 323 (526)
Q Consensus 246 ~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~~~~~ns~-Np~~i~G~~T~a~EI~eQl~- 323 (526)
+|++|+||||++ ++..|+.+++.+||+|+.++++++++.+.+++++++.++++++++ ||.+++||+|+++||++|++
T Consensus 87 ~G~~~~iv~p~~-~~~~k~~~~~~~GA~V~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~n~~~~~g~~t~~~Ei~~q~~~ 165 (311)
T 1ve5_A 87 LGVKALVVMPED-ASPYKKACARAYGAEVVDRGVTAKNREEVARALQEETGYALIHPFDDPLVIAGQGTAGLELLAQAGR 165 (311)
T ss_dssp HTCCEEEECCCC---CCHHHHHHHTTCEEECTTCCTTTHHHHHHHHHHHHCCEECCSSSSHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCC-CCHHHHHHHHHcCCEEEEECCCHHHHHHHHHHHHHhcCcEecCCCCCcchhhhccHHHHHHHHHHHh
Confidence 999999999997 788899999999999999999999999999999888888888886 79999999999999999994
Q ss_pred --CCCCcEEEEeCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCchHHHHHHhCCccccccC-CccccccccccC
Q 009781 324 --WEVPDWVIVPGGNLGNIYAFYKGFQMCKELGLVDRIPRLVCAQAANANPLYLYYKSGWKDFKPVR-ANTTFASAIQIG 400 (526)
Q Consensus 324 --~~~pd~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prvi~Vq~~~~~~l~~a~~~G~~~~~~~~-~~~Tia~~i~i~ 400 (526)
+ .||+||+|+|+||+++|++++|+++ + |.+|||+||++++++++++++.|.. .+.. ...|+++++.++
T Consensus 166 ~~~-~~d~vvvpvG~Gg~~~Gi~~~~k~~---~---~~~~vigve~~~~~~~~~~~~~g~~--~~~~~~~~~i~~gl~~~ 236 (311)
T 1ve5_A 166 MGV-FPGAVLAPVGGGGLLAGLATAVKAL---S---PTTLVLGVEPEAADDAKRSLEAGRI--LRLEAPPRTRADGVRTL 236 (311)
T ss_dssp HTC-CCSEEEEECSSSHHHHHHHHHHHHH---C---TTSEEEEEEEGGGCHHHHHHHHTSC--CCCSSCCCCSCGGGCCS
T ss_pred cCC-CCCEEEEccCchHHHHHHHHHHHHh---C---CCCEEEEEEeCCChHHHHHHHcCCc--cccCCCCCeeeCcCCCC
Confidence 3 6999999999999999999998864 2 6689999999999999999999853 2333 357999999876
Q ss_pred CCccHHHHHHHHHhCCCeEEEeCHHHHHHHHHHH-HhcCCeecchHHHHHHHHHHHHHcCCCCCCCeEEEEECCCCCC
Q 009781 401 DPVSIDRAVYALKNCDGIVEEATEEELMDVSAQA-DSTGMFVCPHTGVALSALIKLRCKGVIGKTDKTVVVSTAHGLK 477 (526)
Q Consensus 401 ~P~~~~~~l~~l~~~~g~~v~Vsd~ei~~A~~~l-~~~Gi~veP~sA~alAal~~l~~~g~i~~~~~vVvv~TG~g~K 477 (526)
.|... .+..+++..+.++.|+|+|++++++++ +++|+++||++|+++||++++.++ . +++||+++||++..
T Consensus 237 ~~~~~--~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~epssa~alaa~~~~~~~---~-~~~vv~i~tgg~~d 308 (311)
T 1ve5_A 237 SLGER--TFPILRERVDGILTVSEEALLEAERLLFTRTKQVVEPTGALPLAAVLEHGAR---L-PQTLALLLSGGNRD 308 (311)
T ss_dssp SCCTT--THHHHHHHCCEEEEECHHHHHHHHHHHHHHTCBCCCGGGGHHHHHHHHHGGG---S-CSEEEEEECBCCCC
T ss_pred CccHH--HHHHHHhcCCEEEEECHHHHHHHHHHHHHhcCceEchHHHHHHHHHHhhhhc---c-CCEEEEEECCCCCC
Confidence 66542 344556778889999999999999986 789999999999999999998765 3 78999999998754
No 18
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=100.00 E-value=1.1e-49 Score=408.83 Aligned_cols=295 Identities=17% Similarity=0.128 Sum_probs=246.2
Q ss_pred hcccccCCCceecccccccccCCCcEEEEecCCCCCCchhhhhHHHHHHHHHHHHhcCCCceEEEEeccchHHHHHHHHH
Q 009781 164 VSAFEGNSNLFWAERFGKEFLQMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLKRMNKPVIGVGCASTGDTSAALSAYC 243 (526)
Q Consensus 164 vsl~eG~TPL~~~~~l~~~~lg~~~l~lK~E~~nPTGSFKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSGN~g~AlAa~a 243 (526)
+....|+|||++++++ + +| .+||+|+|++|||||||||++.+++..+.+.+...+ ..+|+++||||||.|+|++|
T Consensus 7 i~~~~~~TPL~~l~~l-~--~g-~~i~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~~~~-~~~vv~~ssGN~g~a~A~~a 81 (316)
T 1y7l_A 7 NSYSIGNTPLVRLKHF-G--HN-GNVVVKIEGRNPSYSVKCRIGANMVWQAEKDGTLTK-GKEIVDATSGNTGIALAYVA 81 (316)
T ss_dssp GGGGCCCCCEEECSSS-S--ST-TCEEEEETTSSGGGBTHHHHHHHHHHHHHHTTSSCT-TCEEEESCCSHHHHHHHHHH
T ss_pred hHHhcCCCCcEECccC-C--CC-CEEEEEeccCCCCCChHHHHHHHHHHHHHHcCCCCC-CCEEEEeCCcHHHHHHHHHH
Confidence 4667899999999988 4 56 489999999999999999999999988754322111 26899999999999999999
Q ss_pred HhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCC--HHHHHHHHHHHHhcCC-e-eeccC-CchhHHh-HHHHHHHH
Q 009781 244 ASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDTD--FDGCMQLIREVTSELP-I-YLANS-LNSLRLE-GQKTAAIE 317 (526)
Q Consensus 244 a~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~--~dd~~~~~~~~~~~~~-~-~~~ns-~Np~~i~-G~~T~a~E 317 (526)
+++|++|+||||++ ++..|+.+++.+||+|+.++++ ++++.+.+++++++.+ . |++++ .||..++ ||+|+++|
T Consensus 82 ~~~G~~~~iv~p~~-~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~E 160 (316)
T 1y7l_A 82 AARGYKITLTMPET-MSLERKRLLCGLGVNLVLTEGAKGMKGAIAKAEEIVASDPSRYVMLKQFENPANPQIHRETTGPE 160 (316)
T ss_dssp HHHTCCEEEEEETT-SCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTTEECCCTTTCTHHHHHHHHTHHHH
T ss_pred HHcCCcEEEEECCC-CCHHHHHHHHHcCCEEEEeCCCCCHHHHHHHHHHHHHhCCCCEEECCCCCCHHHHHHHHHHHHHH
Confidence 99999999999997 7999999999999999999986 8999999999988864 5 77787 4788766 69999999
Q ss_pred HHHHcCCCCCcEEEEeCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCchHHHHHHhCCccccccCCcccccccc
Q 009781 318 ILQQFDWEVPDWVIVPGGNLGNIYAFYKGFQMCKELGLVDRIPRLVCAQAANANPLYLYYKSGWKDFKPVRANTTFASAI 397 (526)
Q Consensus 318 I~eQl~~~~pd~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prvi~Vq~~~~~~l~~a~~~G~~~~~~~~~~~Tia~~i 397 (526)
|++|+++ .||+||+|+|+||+++|++++|++ ++. |.+|||+||+++++.+.. ++.|... . ...+.+++|
T Consensus 161 i~~q~~~-~~d~vvvpvG~GG~~~Gi~~~~k~---~~~--~~~~vi~ve~~~~~~~~~-~~~g~~~--~--~~~~~~~gi 229 (316)
T 1y7l_A 161 IWKDTDG-KVDVVVAGVGTGGSITGISRAIKL---DFG--KQITSVAVEPVESPVISQ-TLAGEEV--K--PGPHKIQGI 229 (316)
T ss_dssp HHHHTTT-CEEEEEEECSSSHHHHHHHHHHHH---TSC--CCCEEEEEEETTSCHHHH-HHHTCCC--C--CCCCSCTTS
T ss_pred HHHHcCC-CCCEEEEeCCccccHHHHHHHHHH---hCC--CCCEEEEEecCCCccccc-cccCCcc--C--CCCcccCcC
Confidence 9999985 599999999999999999998874 332 668999999999877766 7777521 1 224556777
Q ss_pred ccCC-CccHHHHHHHHHhCCCeEEEeCHHHHHHHHHHH-HhcCCeecchHHHHHHHHHHHHHcCCCCCCCeEEEEECCCC
Q 009781 398 QIGD-PVSIDRAVYALKNCDGIVEEATEEELMDVSAQA-DSTGMFVCPHTGVALSALIKLRCKGVIGKTDKTVVVSTAHG 475 (526)
Q Consensus 398 ~i~~-P~~~~~~l~~l~~~~g~~v~Vsd~ei~~A~~~l-~~~Gi~veP~sA~alAal~~l~~~g~i~~~~~vVvv~TG~g 475 (526)
..+. |.++ .+...+.++.|+|+|++++++++ +++|+++||+||+++||++++.+++ ..++++||+++||+|
T Consensus 230 ~~~~~~~~~------~~~~~d~~~~V~d~e~~~a~~~l~~~~gi~~epssa~~laa~~~~~~~~-~~~~~~vv~i~tg~g 302 (316)
T 1y7l_A 230 GAGFIPKNL------DLSIIDRVETVDSDTALATARRLMAEEGILAGISSGAAVAAADRLAKLP-EFADKLIVVILPSAS 302 (316)
T ss_dssp CCSSCCTTC------CGGGCCEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHTSG-GGTTCEEEEEECBBC
T ss_pred CCCCCCchh------hHhhCCEEEEECHHHHHHHHHHHHHhhCCeEcHHHHHHHHHHHHHHHhc-CCCCCeEEEEECCCC
Confidence 6552 3322 13456789999999999999986 7799999999999999999987765 336789999999999
Q ss_pred CCchHHH
Q 009781 476 LKFTQSK 482 (526)
Q Consensus 476 ~K~~~~~ 482 (526)
.||++.+
T Consensus 303 ~k~~~~~ 309 (316)
T 1y7l_A 303 ERYLSTA 309 (316)
T ss_dssp SSCCCTT
T ss_pred cccCCcc
Confidence 9998874
No 19
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=100.00 E-value=3.4e-50 Score=434.47 Aligned_cols=292 Identities=17% Similarity=0.165 Sum_probs=258.6
Q ss_pred ccCCCceecccccccccCCCcEEEEecCCCCCCchhhhhHHHHHHHHHHHHhcCCCceEEEEeccchHHHHHHHHHHhcC
Q 009781 168 EGNSNLFWAERFGKEFLQMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLKRMNKPVIGVGCASTGDTSAALSAYCASAG 247 (526)
Q Consensus 168 eG~TPL~~~~~l~~~~lg~~~l~lK~E~~nPTGSFKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSGN~g~AlAa~aa~~G 247 (526)
-+.|||++++++++. +|. +||+|+|++||||||||||+.+++..+.. .+ ...+||++|+||||.++|++|+++|
T Consensus 29 i~~TPL~~l~~Ls~~-~g~-~V~lK~E~lqPtgSfKdRgA~n~i~~l~~---~~-~~~gVV~aSsGNhg~avA~aa~~lG 102 (514)
T 1tdj_A 29 AQVTPLQKMEKLSSR-LDN-VILVKREDRQPVHSFKLRGAYAMMAGLTE---EQ-KAHGVITASAGNHAQGVAFSSARLG 102 (514)
T ss_dssp CCCCCEEECHHHHHH-TTS-EEEEECGGGSTTSSSTHHHHHHHHHTTTT---SS-CSSSCEEEECSSSHHHHHHHHHHTT
T ss_pred cCCCCcEEchhhHHh-hCC-eEEEEECCCCCcccHHHHHHHHHHHHHHH---hc-CCCEEEEECCcHHHHHHHHHHHHcC
Confidence 368999999988876 675 89999999999999999999999987642 11 2357999999999999999999999
Q ss_pred CCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCCeeeccCC-chhHHhHHHHHHHHHHHHcCCCC
Q 009781 248 VPSIVFLPANKISIAQLVQPIANGAFVLSLDTDFDGCMQLIREVTSELPIYLANSL-NSLRLEGQKTAAIEILQQFDWEV 326 (526)
Q Consensus 248 i~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~~~~~ns~-Np~~i~G~~T~a~EI~eQl~~~~ 326 (526)
++|+||||.+ ++..|+.+++.+||+|+.+++++|+|.+.+++++++.+++++|++ ||.+++||+|+++||++|+++
T Consensus 103 i~~~IvmP~~-~p~~Kv~~~r~~GAeVvlv~~~~dda~~~a~ela~e~g~~~v~pfdnp~~iaGqgTig~EI~eQl~~-- 179 (514)
T 1tdj_A 103 VKALIVMPTA-TADIKVDAVRGFGGEVLLHGANFDEAKAKAIELSQQQGFTWVPPFDHPMVIAGQGTLALELLQQDAH-- 179 (514)
T ss_dssp CCEEEECCSS-CCHHHHHHHHHHSCEEECCCSSHHHHHHHHHHHHHHHCCEECCSSCCHHHHHHHHHHHHHHHHHCTT--
T ss_pred CcEEEEECCC-CCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHhcCCEeeCCCCCHHHHHHHHHHHHHHHHHCCC--
Confidence 9999999997 789999999999999999999999999999999999899999987 899999999999999999984
Q ss_pred CcEEEEeCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCchHHHHHHhCCccccccCCccccccccccCCCccHH
Q 009781 327 PDWVIVPGGNLGNIYAFYKGFQMCKELGLVDRIPRLVCAQAANANPLYLYYKSGWKDFKPVRANTTFASAIQIGDPVSID 406 (526)
Q Consensus 327 pd~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prvi~Vq~~~~~~l~~a~~~G~~~~~~~~~~~Tia~~i~i~~P~~~~ 406 (526)
+|+||||+|+||+++|++.+|+++ + |.+|||+||+++++++.++++.|+ ....+...|+++++.+..+...
T Consensus 180 ~D~vvvpvGgGGliaGia~~lk~~---~---P~~kVIgVep~~a~~l~~sl~~G~--~~~l~~v~tiadGiav~~~g~~- 250 (514)
T 1tdj_A 180 LDRVFVPVGGGGLAAGVAVLIKQL---M---PQIKVIAVEAEDSACLKAALDAGH--PVDLPRVGLFAEGVAVKRIGDE- 250 (514)
T ss_dssp CCEEEEECSSSHHHHHHHHHHHHH---C---TTCEEEEEEETTTCHHHHHHHHTS--CCCCSCCCSSSSTTCCSSCCCH-
T ss_pred CCEEEEccCcHHHHHHHHHHHHHh---C---CCCEEEEEeccCChhHHHHHhcCC--eeecCCccccccchhcCCCChH-
Confidence 999999999999999999988754 2 678999999999999999999995 3344556799999998877643
Q ss_pred HHHHHHHhCCCeEEEeCHHHHHHHHHHH-HhcCCeecchHHHHHHHHHHHHHcCCCCCCCeEEEEECCCCCCch
Q 009781 407 RAVYALKNCDGIVEEATEEELMDVSAQA-DSTGMFVCPHTGVALSALIKLRCKGVIGKTDKTVVVSTAHGLKFT 479 (526)
Q Consensus 407 ~~l~~l~~~~g~~v~Vsd~ei~~A~~~l-~~~Gi~veP~sA~alAal~~l~~~g~i~~~~~vVvv~TG~g~K~~ 479 (526)
.+..+++..+.++.|+|+|+.++++++ +++|+++||+||+++||++++.+++.+ ++++||+|+||++.|+.
T Consensus 251 -~~~l~~~~vd~~v~Vsd~ei~~ai~~L~~~~givvEPsgA~alAal~~~~~~~~~-~g~~VV~I~tGgn~d~~ 322 (514)
T 1tdj_A 251 -TFRLCQEYLDDIITVDSDAICAAMKDLFEDVRAVAEPSGALALAGMKKYIALHNI-RGERLAHILSGANVNFH 322 (514)
T ss_dssp -HHHHHTTSCCEEEEECHHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHHTC-CSCEEEEECCCCCCCTT
T ss_pred -HHHHHHHhCCeEEEECHHHHHHHHHHHHHHcCeEEcHHHHHHHHHHHHHHHhcCC-CCCeEEEEEeCCCCCHH
Confidence 456678889999999999999999986 889999999999999999998765433 67899999999999976
No 20
>1v71_A Serine racemase, hypothetical protein C320.14 in chromosome III; dimer, PLP, isomerase; HET: PLP; 1.70A {Schizosaccharomyces pombe} SCOP: c.79.1.1 PDB: 1wtc_A* 2zpu_A* 2zr8_A*
Probab=100.00 E-value=3.5e-50 Score=413.69 Aligned_cols=291 Identities=17% Similarity=0.190 Sum_probs=252.4
Q ss_pred ccCCCceecccccccccCCCcEEEEecCCCCCCchhhhhHHHHHHHHHHHHhcCCCceEEEEeccchHHHHHHHHHHhcC
Q 009781 168 EGNSNLFWAERFGKEFLQMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLKRMNKPVIGVGCASTGDTSAALSAYCASAG 247 (526)
Q Consensus 168 eG~TPL~~~~~l~~~~lg~~~l~lK~E~~nPTGSFKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSGN~g~AlAa~aa~~G 247 (526)
.++|||++++++++. +|. +||+|+|++|||||||||++.+++..+.+. .+ ..+|+++||||||.|+|++|+++|
T Consensus 24 i~~TPL~~~~~l~~~-~g~-~i~~K~E~~~ptGS~KdRga~~~i~~~~~~--~~--~~~vv~~ssGN~g~alA~~a~~~G 97 (323)
T 1v71_A 24 ANKTPVLTSSTVNKE-FVA-EVFFKCENFQKMGAFKFRGALNALSQLNEA--QR--KAGVLTFSSGNHAQAIALSAKILG 97 (323)
T ss_dssp SCCCCEECCHHHHHH-HTS-EEEEEEGGGSGGGBTHHHHHHHHHTTCCHH--HH--HHCEEECCSSHHHHHHHHHHHHTT
T ss_pred CCCCCceEhHhhHHH-hCC-eEEEEecCCCCcCCHHHHHHHHHHHHHHHh--cC--CCeEEEeCCCcHHHHHHHHHHHcC
Confidence 478999999988776 675 899999999999999999999998765432 11 357999999999999999999999
Q ss_pred CCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCCeeeccCC-chhHHhHHHHHHHHHHHHcCCCC
Q 009781 248 VPSIVFLPANKISIAQLVQPIANGAFVLSLDTDFDGCMQLIREVTSELPIYLANSL-NSLRLEGQKTAAIEILQQFDWEV 326 (526)
Q Consensus 248 i~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~~~~~ns~-Np~~i~G~~T~a~EI~eQl~~~~ 326 (526)
++|+||||++ ++..|+.+++.+||+|+.++++++++.+.+++++++.++++++++ ||.+++||+|+++||++|++ .
T Consensus 98 ~~~~iv~p~~-~~~~k~~~~~~~GA~V~~~~~~~~~~~~~a~~l~~~~~~~~i~~~~n~~~~~g~~t~~~Ei~~q~~--~ 174 (323)
T 1v71_A 98 IPAKIIMPLD-APEAKVAATKGYGGQVIMYDRYKDDREKMAKEISEREGLTIIPPYDHPHVLAGQGTAAKELFEEVG--P 174 (323)
T ss_dssp CCEEEEEETT-CCHHHHHHHHHTTCEEEEECTTTTCHHHHHHHHHHHHTCBCCCSSSSHHHHHHHTHHHHHHHHHHC--C
T ss_pred CCEEEECCCC-CcHHHHHHHHHcCCEEEEECCCHHHHHHHHHHHHHhcCCEecCCCCCcchhhhHhHHHHHHHHhcC--C
Confidence 9999999997 789999999999999999999999999999999888787778876 79999999999999999998 5
Q ss_pred CcEEEEeCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCchHHHHHHhCCccccccCCccccccccccCCCccHH
Q 009781 327 PDWVIVPGGNLGNIYAFYKGFQMCKELGLVDRIPRLVCAQAANANPLYLYYKSGWKDFKPVRANTTFASAIQIGDPVSID 406 (526)
Q Consensus 327 pd~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prvi~Vq~~~~~~l~~a~~~G~~~~~~~~~~~Tia~~i~i~~P~~~~ 406 (526)
||+||+|+|+||+++|++++|+++ + |.+|||+||+++++++.+++..|+ +.+.....|++++|+++.|...
T Consensus 175 ~d~vv~~vG~GGt~~Gi~~~~k~~---~---~~~~vigve~~~~~~~~~~~~~g~--~~~~~~~~t~a~gl~~~~~~~~- 245 (323)
T 1v71_A 175 LDALFVCLGGGGLLSGSALAARHF---A---PNCEVYGVEPEAGNDGQQSFRKGS--IVHIDTPKTIADGAQTQHLGNY- 245 (323)
T ss_dssp CSEEEEECSSSHHHHHHHHHHHHH---C---TTCEEEEEEEGGGCHHHHHHHHTS--CCCCCCCCCSCTTSCCSSCCHH-
T ss_pred CCEEEEecCCcHHHHHHHHHHHHc---C---CCCEEEEEEeCCCchHHHHHHcCC--ceecCCCCcccccccCCCCcHH-
Confidence 999999999999999999998854 3 568999999999999999999985 3333445799999998777543
Q ss_pred HHHHHHHhCCCeEEEeCHHHHHHHHHHH-HhcCCeecchHHHHHHHHHHHHHcCCCCCCCeEEEEECCCCCCchHH
Q 009781 407 RAVYALKNCDGIVEEATEEELMDVSAQA-DSTGMFVCPHTGVALSALIKLRCKGVIGKTDKTVVVSTAHGLKFTQS 481 (526)
Q Consensus 407 ~~l~~l~~~~g~~v~Vsd~ei~~A~~~l-~~~Gi~veP~sA~alAal~~l~~~g~i~~~~~vVvv~TG~g~K~~~~ 481 (526)
.+..+++..+.++.|+|+|++++++++ +++|+++||++|++++|++++.++ + ++++||+|+||++ .+++.
T Consensus 246 -~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~eps~a~alaa~~~~~~~--~-~~~~vv~i~tGg~-~~~~~ 316 (323)
T 1v71_A 246 -TFSIIKEKVDDILTVSDEELIDCLKFYAARMKIVVEPTGCLSFAAARAMKEK--L-KNKRIGIIISGGN-VDIER 316 (323)
T ss_dssp -HHHHHHHHCCEEEEECHHHHHHHHHHHHHHTCCCCCGGGGHHHHHHHHTGGG--G-TTCEEEEEECBCC-CCHHH
T ss_pred -HHHHHHHhCCEEEEECHHHHHHHHHHHHHhcCeEEcHHHHHHHHHHHHhHHh--c-CCCeEEEEeCCCC-CCHHH
Confidence 345667778899999999999999986 779999999999999999987654 3 6889999999965 44554
No 21
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=100.00 E-value=3.7e-49 Score=404.27 Aligned_cols=291 Identities=18% Similarity=0.203 Sum_probs=238.7
Q ss_pred hcccccCCCceecccccccccCCCcEEEEecCCCCCCchhhhhHHHHHHHHHHHHhcCCCceEEEEeccchHHHHHHHHH
Q 009781 164 VSAFEGNSNLFWAERFGKEFLQMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLKRMNKPVIGVGCASTGDTSAALSAYC 243 (526)
Q Consensus 164 vsl~eG~TPL~~~~~l~~~~lg~~~l~lK~E~~nPTGSFKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSGN~g~AlAa~a 243 (526)
++...|+|||++++++++. +|. +||+|+|++|||||||||++.+++..+.+.++..+ ..+|+++||||||.|+|++|
T Consensus 10 i~~~~~~TPL~~~~~l~~~-~g~-~i~~K~E~~~ptgSfK~R~a~~~l~~a~~~g~~~~-g~~vv~assGN~g~alA~~a 86 (313)
T 2q3b_A 10 ITQLIGRTPLVRLRRVTDG-AVA-DIVAKLEFFNPANSVKDRIGVAMLQAAEQAGLIKP-DTIILEPTSGNTGIALAMVC 86 (313)
T ss_dssp GGGGSCCCCEEECSSSCTT-CCS-EEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTCCCT-TCEEEEECSSHHHHHHHHHH
T ss_pred HHHhcCCCceEECcccccc-cCc-EEEEEehhcCCCCcHHHHHHHHHHHHHHHcCCCCC-CCEEEEeCCCHHHHHHHHHH
Confidence 4567899999999988776 564 89999999999999999999999988754322111 25899999999999999999
Q ss_pred HhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECC--CHHHHHHHHHHHHhcCCe-eeccCC-chhHHhH-HHHHHHHH
Q 009781 244 ASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDT--DFDGCMQLIREVTSELPI-YLANSL-NSLRLEG-QKTAAIEI 318 (526)
Q Consensus 244 a~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g--~~dd~~~~~~~~~~~~~~-~~~ns~-Np~~i~G-~~T~a~EI 318 (526)
+++|++|+||||.+ ++..|+.+++.+||+|+.+++ +++++.+.+++++++.++ ++.+++ ||.+++| |+|+++||
T Consensus 87 ~~~G~~~~iv~p~~-~~~~k~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~n~~~~~~~~~t~~~Ei 165 (313)
T 2q3b_A 87 AARGYRCVLTMPET-MSLERRMLLRAYGAELILTPGADGMSGAIAKAEELAKTDQRYFVPQQFENPANPAIHRVTTAEEV 165 (313)
T ss_dssp HHHTCEEEEEEETT-SCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTEECCCTTTCTHHHHHHHHTHHHHH
T ss_pred HHcCCcEEEEECCC-CCHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHHHHHhCCCEEeCCCCCChhhHHHHHHHHHHHH
Confidence 99999999999997 799999999999999999987 589999999999888776 777775 8999866 99999999
Q ss_pred HHHcCCCCCcEEEEeCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCchHHHHHHhCCccccccCCccccccccc
Q 009781 319 LQQFDWEVPDWVIVPGGNLGNIYAFYKGFQMCKELGLVDRIPRLVCAQAANANPLYLYYKSGWKDFKPVRANTTFASAIQ 398 (526)
Q Consensus 319 ~eQl~~~~pd~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prvi~Vq~~~~~~l~~a~~~G~~~~~~~~~~~Tia~~i~ 398 (526)
++|+++ .||+||+|+|+||+++|++++|+++ + |.+|||+||+++++.+.. ++.| .+..+++.
T Consensus 166 ~~q~~~-~~d~vvvpvG~GG~~~Gi~~~~k~~---~---~~~~vi~ve~~~~~~~~~-~~~g----------~~~~~g~~ 227 (313)
T 2q3b_A 166 WRDTDG-KVDIVVAGVGTGGTITGVAQVIKER---K---PSARFVAVEPAASPVLSG-GQKG----------PHPIQGIG 227 (313)
T ss_dssp HHHTTT-CCCEEEEECSSSHHHHHHHHHHHHH---C---TTCEEEEEEETTSCTTTT-CCCC----------CCCCTTSC
T ss_pred HHHcCC-CCCEEEEccCcchhHHHHHHHHHHh---C---CCCEEEEEeeCCCccccC-CCCC----------CcccCCcC
Confidence 999975 5999999999999999999998854 2 568999999999765531 1111 24455665
Q ss_pred cC-CCccHHHHHHHHHhCCCeEEEeCHHHHHHHHHHH-HhcCCeecchHHHHHHHHHHHHHcCCCCCCCeEEEEECCCCC
Q 009781 399 IG-DPVSIDRAVYALKNCDGIVEEATEEELMDVSAQA-DSTGMFVCPHTGVALSALIKLRCKGVIGKTDKTVVVSTAHGL 476 (526)
Q Consensus 399 i~-~P~~~~~~l~~l~~~~g~~v~Vsd~ei~~A~~~l-~~~Gi~veP~sA~alAal~~l~~~g~i~~~~~vVvv~TG~g~ 476 (526)
.+ .|.++. +...+.++.|+|+|++++++++ +++|+++||++|++++|++++.+++. .++++||+++||+|.
T Consensus 228 ~~~~~~~~~------~~~~d~~~~v~d~e~~~a~~~l~~~~gi~~epssa~alaa~~~~~~~~~-~~~~~vv~v~~~~g~ 300 (313)
T 2q3b_A 228 AGFVPPVLD------QDLVDEIITVGNEDALNVARRLAREEGLLVGISSGAATVAALQVARRPE-NAGKLIVVVLPDFGE 300 (313)
T ss_dssp CSSCCTTCC------GGGCCEEEEECHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHHHHHTCGG-GTTCEEEEEECBBSG
T ss_pred CCCCChhhh------HhhccEEEEECHHHHHHHHHHHHHHcCceEchHHHHHHHHHHHHHHhcC-CCCCEEEEEECCCCc
Confidence 44 243322 3345678999999999999986 77999999999999999999877642 267899999999999
Q ss_pred CchHHHH
Q 009781 477 KFTQSKI 483 (526)
Q Consensus 477 K~~~~~~ 483 (526)
||++.++
T Consensus 301 ky~~~~~ 307 (313)
T 2q3b_A 301 RYLSTPL 307 (313)
T ss_dssp GGC----
T ss_pred ccccchh
Confidence 9998753
No 22
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=100.00 E-value=4.1e-49 Score=402.33 Aligned_cols=285 Identities=17% Similarity=0.200 Sum_probs=238.4
Q ss_pred cccCCCceecccccccccCCCcEEEEecCCCCCCchhhhhHHHHHHHHHHHHhcCCCce--EEEEeccchHHHHHHHHHH
Q 009781 167 FEGNSNLFWAERFGKEFLQMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLKRMNKPVI--GVGCASTGDTSAALSAYCA 244 (526)
Q Consensus 167 ~eG~TPL~~~~~l~~~~lg~~~l~lK~E~~nPTGSFKDRga~~~v~~a~~~~~~g~~~~--~Vv~aSSGN~g~AlAa~aa 244 (526)
.+|+|||++++++++. +| .+||+|+|++|||||||||++.+++..+.+.++... .. +|+++||||||.|+|++|+
T Consensus 6 ~~~~TPL~~~~~l~~~-~g-~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~g~~~~-g~~~~vv~assGN~g~a~A~~a~ 82 (304)
T 1ve1_A 6 AIGKTPVVRLAKVVEP-DM-AEVWVKLEGLNPGGSIKDRPAWYMIKDAEERGILRP-GSGQVIVEPTSGNTGIGLAMIAA 82 (304)
T ss_dssp GCCCCCEEECCSSSCT-TS-CEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTSCCT-TSCCEEEESCCSHHHHHHHHHHH
T ss_pred hcCCCCcEECcccccc-cC-CEEEEEecccCCCCcHHHHHHHHHHHHHHHcCCCCC-CCccEEEEeCCcHHHHHHHHHHH
Confidence 4689999999998876 66 489999999999999999999999988754322111 14 8999999999999999999
Q ss_pred hcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCC--HHHHHHHHHHHHhcCCeeeccC-CchhHHhH-HHHHHHHHHH
Q 009781 245 SAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDTD--FDGCMQLIREVTSELPIYLANS-LNSLRLEG-QKTAAIEILQ 320 (526)
Q Consensus 245 ~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~--~dd~~~~~~~~~~~~~~~~~ns-~Np~~i~G-~~T~a~EI~e 320 (526)
++|++|+||||.+ ++..|+.+++.+||+|+.++++ ++++++.+++++++.+++++++ .||.+++| |+|+++||++
T Consensus 83 ~~G~~~~i~~p~~-~~~~k~~~~~~~Ga~V~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~n~~~~~g~~~t~~~Ei~~ 161 (304)
T 1ve1_A 83 SRGYRLILTMPAQ-MSEERKRVLKAFGAELVLTDPERRMLAAREEALRLKEELGAFMPDQFKNPANVRAHYETTGPELYE 161 (304)
T ss_dssp HHTCEEEEEEETT-CCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHHHTCBCCCTTTCHHHHHHHHHTHHHHHHH
T ss_pred HcCCcEEEEeCCC-CCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHhcCCCEeCCCCCChhHHHHHHHHHHHHHHH
Confidence 9999999999997 7999999999999999999987 9999999999988777787876 48999999 5999999999
Q ss_pred HcCCCCCcEEEEeCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCchHHHHHHhCCccccccCCccccccccccC
Q 009781 321 QFDWEVPDWVIVPGGNLGNIYAFYKGFQMCKELGLVDRIPRLVCAQAANANPLYLYYKSGWKDFKPVRANTTFASAIQIG 400 (526)
Q Consensus 321 Ql~~~~pd~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prvi~Vq~~~~~~l~~a~~~G~~~~~~~~~~~Tia~~i~i~ 400 (526)
|+++ .||+||+|+|+||+++|++++|+++ .|.+|||+||+++++.+. .|. + ...+ .++|..+
T Consensus 162 q~~~-~~d~vvvpvG~GG~~~Gi~~~~k~~------~~~~~vi~ve~~~~~~~~----~g~----~--~~~~-~~gl~~~ 223 (304)
T 1ve1_A 162 ALEG-RIDAFVYGSGTGGTITGVGRYLKER------IPHVKVIAVEPARSNVLS----GGK----M--GQHG-FQGMGPG 223 (304)
T ss_dssp HTTT-CCSEEEEECSSSHHHHHHHHHHHTT------CTTCEEEEEEEGGGCTTT----TCC----C--CCCS-CTTSCCS
T ss_pred HcCC-CCCEEEEecCCchhHHHHHHHHHHh------CCCCEEEEEecCCCcccc----CCC----C--CCcc-cCCCCCC
Confidence 9985 5999999999999999999988743 267899999999975542 332 1 1123 3666554
Q ss_pred C-CccHHHHHHHHHhCCCeEEEeCHHHHHHHHHHH-HhcCCeecchHHHHHHHHHHHHHcCCCCCCCeEEEEECCCCCCc
Q 009781 401 D-PVSIDRAVYALKNCDGIVEEATEEELMDVSAQA-DSTGMFVCPHTGVALSALIKLRCKGVIGKTDKTVVVSTAHGLKF 478 (526)
Q Consensus 401 ~-P~~~~~~l~~l~~~~g~~v~Vsd~ei~~A~~~l-~~~Gi~veP~sA~alAal~~l~~~g~i~~~~~vVvv~TG~g~K~ 478 (526)
. |.++ .+...+.++.|+|+|++++++++ +++|+++||++|++++|++++.++ +.++++||+++||+|.||
T Consensus 224 ~~~~~~------~~~~~d~~~~V~d~e~~~a~~~l~~~~gi~~epssa~a~aa~~~~~~~--~~~~~~vv~i~tg~g~ky 295 (304)
T 1ve1_A 224 FIPENL------DLSLLDGVIQVWEEDAFPLARRLAREEGLFLGMSSGGIVWAALQVARE--LGPGKRVACISPDGGWKY 295 (304)
T ss_dssp SCCTTC------CGGGCSEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHHH--HCTTCEEEEEECBBSGGG
T ss_pred CCChhh------hhhhCCEEEEECHHHHHHHHHHHHHHhCcEEcHHHHHHHHHHHHHHHh--cCCCCeEEEEECCCCccC
Confidence 2 3322 13456778999999999999986 779999999999999999998765 346789999999999999
Q ss_pred hHH
Q 009781 479 TQS 481 (526)
Q Consensus 479 ~~~ 481 (526)
++.
T Consensus 296 ~~~ 298 (304)
T 1ve1_A 296 LST 298 (304)
T ss_dssp TTS
T ss_pred CCc
Confidence 886
No 23
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=100.00 E-value=8.8e-49 Score=405.25 Aligned_cols=289 Identities=16% Similarity=0.196 Sum_probs=241.0
Q ss_pred hcccccCCCceecccccccccCCCcEEEEecCCCCCCchhhhhHHHHHHHHHHHHhcCCCceE-EEEeccchHHHHHHHH
Q 009781 164 VSAFEGNSNLFWAERFGKEFLQMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLKRMNKPVIG-VGCASTGDTSAALSAY 242 (526)
Q Consensus 164 vsl~eG~TPL~~~~~l~~~~lg~~~l~lK~E~~nPTGSFKDRga~~~v~~a~~~~~~g~~~~~-Vv~aSSGN~g~AlAa~ 242 (526)
+....|+|||++++++ .. +| .+||+|+|++|||||||||++.+++..+.+.+.+.++ .+ |+++||||||.|+|++
T Consensus 15 i~~~ig~TPL~~l~~l-~~-~g-~~i~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~l~~g-~~vvv~aSsGN~g~alA~a 90 (334)
T 3tbh_A 15 IDQLIGQTPALYLNKL-NN-TK-AKVVLKMECENPMASVKDRLGFAIYDKAEKEGKLIPG-KSIVVESSSGNTGVSLAHL 90 (334)
T ss_dssp GGGGSSCCCEEECCTT-CC-SS-SEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTSCCTT-TCEEEEECSSHHHHHHHHH
T ss_pred HHHhcCCCCeEECCcc-cC-CC-CEEEEEeCCCCCccCcHHHHHHHHHHHHHHcCCCCCC-CeEEEEeCCCHHHHHHHHH
Confidence 5667899999999988 55 66 4899999999999999999999999887654322222 34 5999999999999999
Q ss_pred HHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCC--HHHHHHHHHHHHhcC-CeeeccCC-chh-HHhHHHHHHHH
Q 009781 243 CASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDTD--FDGCMQLIREVTSEL-PIYLANSL-NSL-RLEGQKTAAIE 317 (526)
Q Consensus 243 aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~--~dd~~~~~~~~~~~~-~~~~~ns~-Np~-~i~G~~T~a~E 317 (526)
|+++|++|+||||++ ++..|+.+++.+||+|+.++++ ++++++.+++++++. ++++++++ ||. .+.||+|+++|
T Consensus 91 a~~~G~~~~iv~p~~-~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~~~~~~~~~~~i~~~~np~n~~~g~~t~~~E 169 (334)
T 3tbh_A 91 GAIRGYKVIITMPES-MSLERRCLLRIFGAEVILTPAALGMKGAVAMAKKIVAANPNAVLADQFATKYNALIHEETTGPE 169 (334)
T ss_dssp HHHHTCEEEEEEETT-SCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTEEECCTTTCHHHHHHHHHTHHHH
T ss_pred HHHhCCCEEEEECCC-CCHHHHHHHHHCCCEEEEECCCCCchHHHHHHHHHHHhCCCEEECCccCChhHHHHHHHHHHHH
Confidence 999999999999997 7899999999999999999875 899999999998887 78889886 787 46689999999
Q ss_pred HHHHcCCCCCcEEEEeCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCchHHHHHHhCCccccccCCcccccccc
Q 009781 318 ILQQFDWEVPDWVIVPGGNLGNIYAFYKGFQMCKELGLVDRIPRLVCAQAANANPLYLYYKSGWKDFKPVRANTTFASAI 397 (526)
Q Consensus 318 I~eQl~~~~pd~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prvi~Vq~~~~~~l~~a~~~G~~~~~~~~~~~Tia~~i 397 (526)
|++|+++ .||+||+|+|+||+++|++++|+++ .|.+|||+||+++++++. .|+. . .+..+++
T Consensus 170 i~~q~~~-~~d~vv~pvG~GG~~aGi~~~~k~~------~p~~~vigVe~~~~~~~~----~g~~--~-----~~~~~gi 231 (334)
T 3tbh_A 170 IWEQTNH-NVDCFIAGVGTGGTLTGVARALKKM------GSHARIVAVEPTESPVLS----GGKP--G-----PHKIQGI 231 (334)
T ss_dssp HHHHTTS-CCSEEEEECSSSHHHHHHHHHHHHT------TCCCEEEEEEETTSCTTT----TCCC--C-----CCSCTTS
T ss_pred HHHHhCC-CCCEEEeccCCcHhHHHHHHHHHHh------CCCCEEEEEeeCCchHhh----CCCc--C-----CeecCCC
Confidence 9999975 6999999999999999999988853 267899999999987654 3431 1 1222344
Q ss_pred ccC-CCccHHHHHHHHHhCCCeEEEeCHHHHHHHHHHH-HhcCCeecchHHHHHHHHHHHHHcCCCCCCCeEEEEECCCC
Q 009781 398 QIG-DPVSIDRAVYALKNCDGIVEEATEEELMDVSAQA-DSTGMFVCPHTGVALSALIKLRCKGVIGKTDKTVVVSTAHG 475 (526)
Q Consensus 398 ~i~-~P~~~~~~l~~l~~~~g~~v~Vsd~ei~~A~~~l-~~~Gi~veP~sA~alAal~~l~~~g~i~~~~~vVvv~TG~g 475 (526)
..+ .|.++ .++..+.++.|+|+|++++++++ +++|+++||++|++++|++++.+++ +.++++||+|+||+|
T Consensus 232 ~~~~~~~~~------~~~~~d~~~~V~d~e~~~a~~~l~~~egi~~epssgaa~aa~~~~~~~~-~~~g~~Vv~v~t~~g 304 (334)
T 3tbh_A 232 GPGFVPDVL------DRSLIDEVLCVAGDDAIETALKLTRSDGVFCGFSGGANVYAALKIAERP-EMEGKTIVTVIPSFG 304 (334)
T ss_dssp CCSSCCTTC------CGGGCSEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHHSG-GGTTCEEEEEECBBG
T ss_pred CCCcCCHHH------HHHhCCEEEEECHHHHHHHHHHHHHHcCeEEcHHHHHHHHHHHHHHHhc-cCCcCeEEEEECCCC
Confidence 433 23332 24567889999999999999986 7789999999999999999988765 457899999999999
Q ss_pred CCchHHH
Q 009781 476 LKFTQSK 482 (526)
Q Consensus 476 ~K~~~~~ 482 (526)
.||.+.+
T Consensus 305 ~ky~~~~ 311 (334)
T 3tbh_A 305 ERYLSTT 311 (334)
T ss_dssp GGGTTSG
T ss_pred ccccCch
Confidence 9999874
No 24
>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus}
Probab=100.00 E-value=2.8e-49 Score=404.34 Aligned_cols=289 Identities=18% Similarity=0.193 Sum_probs=221.8
Q ss_pred hcccccCCCceecccccccccCCCcEEEEecCCCCCCchhhhhHHHHHHHHHHHHhcCCCceEEEEeccchHHHHHHHHH
Q 009781 164 VSAFEGNSNLFWAERFGKEFLQMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLKRMNKPVIGVGCASTGDTSAALSAYC 243 (526)
Q Consensus 164 vsl~eG~TPL~~~~~l~~~~lg~~~l~lK~E~~nPTGSFKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSGN~g~AlAa~a 243 (526)
++...|+|||++++++++. +| .+||+|+|++|||||||||++.+++..+.+.++..+ ..+|+++||||||.|+|++|
T Consensus 8 i~~~~~~TPL~~l~~l~~~-~g-~~i~~K~E~~~ptgSfK~R~a~~~l~~a~~~g~~~~-g~~vv~assGN~g~a~A~~a 84 (308)
T 2egu_A 8 ITELIGDTPAVKLNRIVDE-DS-ADVYLKLEFMNPGSSVKDRIALAMIEAAEKAGKLKP-GDTIVEPTSGNTGIGLAMVA 84 (308)
T ss_dssp GGGGSSCCCEEECCSSSCT-TS-CEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTCCCT-TCEEEEECCHHHHHHHHHHH
T ss_pred HHHhcCCCCeEECCccccc-CC-CEEEEEecccCCCCChHHHHHHHHHHHHHHcCCCCC-CCEEEEeCCCHHHHHHHHHH
Confidence 4557889999999988876 66 489999999999999999999999988754322111 25899999999999999999
Q ss_pred HhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCC--HHHHHHHHHHHHhcCCeeeccCC-chhHH-hHHHHHHHHHH
Q 009781 244 ASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDTD--FDGCMQLIREVTSELPIYLANSL-NSLRL-EGQKTAAIEIL 319 (526)
Q Consensus 244 a~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~--~dd~~~~~~~~~~~~~~~~~ns~-Np~~i-~G~~T~a~EI~ 319 (526)
+++|++|+||||++ ++..|+.+++.+||+|+.++++ ++++.+.+++++++.++++.+++ ||..+ .||+|+++||+
T Consensus 85 ~~~G~~~~iv~p~~-~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~ 163 (308)
T 2egu_A 85 AAKGYKAVLVMPDT-MSLERRNLLRAYGAELVLTPGAQGMRGAIAKAEELVREHGYFMPQQFKNEANPEIHRLTTGKEIV 163 (308)
T ss_dssp HHHTCEEEEEEESC-SCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHHCCBCC--------------CHHHHHH
T ss_pred HHcCCCEEEEECCC-CCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHHCcCCcCCcCCChhHHHHHHHHHHHHHH
Confidence 99999999999997 7899999999999999999874 79999999999888777777775 78764 79999999999
Q ss_pred HHcCCCCCcEEEEeCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCchHHHHHHhCCccccccCCcccccccccc
Q 009781 320 QQFDWEVPDWVIVPGGNLGNIYAFYKGFQMCKELGLVDRIPRLVCAQAANANPLYLYYKSGWKDFKPVRANTTFASAIQI 399 (526)
Q Consensus 320 eQl~~~~pd~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prvi~Vq~~~~~~l~~a~~~G~~~~~~~~~~~Tia~~i~i 399 (526)
+|+++ .||+||+|+|+||+++|++++|+++ + |.+|||+||+++++.+. ..+.+ .+..+++..
T Consensus 164 ~q~~~-~~d~vvvpvG~GG~~~Gi~~~~k~~---~---~~~~vigve~~~~~~~~-~~~~~----------~~~~~g~~~ 225 (308)
T 2egu_A 164 EQMGD-QLDAFVAGVGTGGTITGAGKVLREA---Y---PNIKIYAVEPADSPVLS-GGKPG----------PHKIQGIGA 225 (308)
T ss_dssp HHHTT-CCCEEEEEGGGTHHHHHHHHHHHHH---C---TTCEEEEEEECC------------------------------
T ss_pred HHcCC-CCCEEEEeeCCchhHHHHHHHHHHh---C---CCCEEEEEEeCCCcccc-CCCCC----------CcccCccCC
Confidence 99985 5999999999999999999998854 2 56899999999975443 22222 233455543
Q ss_pred C-CCccHHHHHHHHHhCCCeEEEeCHHHHHHHHHHH-HhcCCeecchHHHHHHHHHHHHHcCCCCCCCeEEEEECCCCCC
Q 009781 400 G-DPVSIDRAVYALKNCDGIVEEATEEELMDVSAQA-DSTGMFVCPHTGVALSALIKLRCKGVIGKTDKTVVVSTAHGLK 477 (526)
Q Consensus 400 ~-~P~~~~~~l~~l~~~~g~~v~Vsd~ei~~A~~~l-~~~Gi~veP~sA~alAal~~l~~~g~i~~~~~vVvv~TG~g~K 477 (526)
+ .|.++ .+...+.++.|+|+|++++++++ +++|+++||+||++++|++++.+++ .++++||+++||+|.|
T Consensus 226 ~~~~~~~------~~~~~d~~~~v~d~e~~~a~~~l~~~~gi~~epssa~a~aa~~~~~~~~--~~~~~vv~i~tg~g~k 297 (308)
T 2egu_A 226 GFVPDIL------DTSIYDGVITVTTEEAFAAARRAAREEGILGGISSGAAIHAALKVAKEL--GKGKKVLAIIPSNGER 297 (308)
T ss_dssp ----CCC------CCCSCSEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHHHH--CTTCEEEEEECBBGGG
T ss_pred CCCCHhH------HHHhcCeEEEECHHHHHHHHHHHHHHhCceEcHHHHHHHHHHHHHHHhc--CCCCeEEEEECCCCcc
Confidence 3 12221 13345678999999999999986 7799999999999999999987765 4678999999999999
Q ss_pred chHHH
Q 009781 478 FTQSK 482 (526)
Q Consensus 478 ~~~~~ 482 (526)
|++.+
T Consensus 298 y~~~~ 302 (308)
T 2egu_A 298 YLSTP 302 (308)
T ss_dssp GTTSS
T ss_pred cccch
Confidence 98874
No 25
>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, J protein structure initiative, joint center for structural G transferase; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A*
Probab=100.00 E-value=8.6e-49 Score=400.00 Aligned_cols=284 Identities=18% Similarity=0.234 Sum_probs=237.6
Q ss_pred chhcccccCCCceecccccccccCCCcEEEEecCCCCCCchhhhhHHHHHHHHHHHHhcCCCceEEEEeccchHHHHHHH
Q 009781 162 DIVSAFEGNSNLFWAERFGKEFLQMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLKRMNKPVIGVGCASTGDTSAALSA 241 (526)
Q Consensus 162 ~~vsl~eG~TPL~~~~~l~~~~lg~~~l~lK~E~~nPTGSFKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSGN~g~AlAa 241 (526)
+.++..+++|||+++++++ .+||+|+|++|||||||||++.+++..+.+. |....+|+++||||||.|+|+
T Consensus 12 ~~~~~~~~~TPL~~l~~l~------~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~---g~~~~~vv~aSsGN~g~a~A~ 82 (303)
T 1o58_A 12 HMMERLIGSTPIVRLDSID------SRIFLKLEKNNPGGSVKDRPALFMILDAEKR---GLLKNGIVEPTSGNMGIAIAM 82 (303)
T ss_dssp CHHHHHSCCCCEEECTTTC------TTEEEEEGGGSTTSBTTHHHHHHHHHHHHHT---TCCTTCEEEECSSHHHHHHHH
T ss_pred hhhhhccCCCCeEECccCC------ceEEEEecCCCCCCChHHHHHHHHHHHHHHc---CCCCCCEEEECchHHHHHHHH
Confidence 4567889999999988764 4799999999999999999999999877542 321135899999999999999
Q ss_pred HHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCC--HHHHHHHHHHHHhcCCeeeccCC-chhHHh-HHHHHHHH
Q 009781 242 YCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDTD--FDGCMQLIREVTSELPIYLANSL-NSLRLE-GQKTAAIE 317 (526)
Q Consensus 242 ~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~--~dd~~~~~~~~~~~~~~~~~ns~-Np~~i~-G~~T~a~E 317 (526)
+|+++|++|+||||++ ++..|+.+++.+||+|+.++++ ++++++.+++++++.++|+++++ ||..++ ||+|+++|
T Consensus 83 aa~~~G~~~~iv~p~~-~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~E 161 (303)
T 1o58_A 83 IGAKRGHRVILTMPET-MSVERRKVLKMLGAELVLTPGELGMKGAVEKALEISRETGAHMLNQFENPYNVYSHQFTTGPE 161 (303)
T ss_dssp HHHHHTCCEEEEEETT-SCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHHCCBCCCTTTCHHHHHHHHHTHHHH
T ss_pred HHHHcCCcEEEEECCC-CCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhcCeEeCCCCCCHHHHHHHHHHHHHH
Confidence 9999999999999997 7999999999999999999987 99999999999887787777774 888765 78999999
Q ss_pred HHHHcCCCCCcEEEEeCCchhHHHHHHHHHHHHHHcCCCCCC-CeEEEEecCCCchHHHHHHhCCccccccCCccccccc
Q 009781 318 ILQQFDWEVPDWVIVPGGNLGNIYAFYKGFQMCKELGLVDRI-PRLVCAQAANANPLYLYYKSGWKDFKPVRANTTFASA 396 (526)
Q Consensus 318 I~eQl~~~~pd~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~-prvi~Vq~~~~~~l~~a~~~G~~~~~~~~~~~Tia~~ 396 (526)
|++|+++ .||+||+|+|+||+++|++++|+++. |. +|||+||+++++.+. .|+. ..+..++
T Consensus 162 i~~q~~~-~~d~vvvpvG~GG~~~Gi~~~~k~~~------p~~~~vigve~~~~~~~~----~g~~-------~~~~~~g 223 (303)
T 1o58_A 162 ILKQMDY-QIDAFVAGVGTGGTISGVGRVLKGFF------GNGVKIVAVEPAKSPVLS----GGQP-------GKHAIQG 223 (303)
T ss_dssp HHHHTTT-CCSEEEEECSSSHHHHHHHHHHHHHH------GGGSEEEEEEETTSCTTT----TCCC-------CCCCCTT
T ss_pred HHHHcCC-CCCEEEEeeCCcccHHHHHHHHHHhC------CCCCEEEEEecCCCcccc----CCCC-------CCeecCc
Confidence 9999985 59999999999999999999998753 45 799999999976654 2321 1234455
Q ss_pred cccCC-CccHHHHHHHHHhCCCeEEEeCHHHHHHHHHHH-HhcCCeecchHHHHHHHHHHHHHcCCCCCCCeEEEEECCC
Q 009781 397 IQIGD-PVSIDRAVYALKNCDGIVEEATEEELMDVSAQA-DSTGMFVCPHTGVALSALIKLRCKGVIGKTDKTVVVSTAH 474 (526)
Q Consensus 397 i~i~~-P~~~~~~l~~l~~~~g~~v~Vsd~ei~~A~~~l-~~~Gi~veP~sA~alAal~~l~~~g~i~~~~~vVvv~TG~ 474 (526)
+..+. |.++ .+...+.++.|+|+|++++++++ +++|+++||++|++++|++++.++ +.++++||+++||+
T Consensus 224 i~~~~~~~~~------~~~~~d~~~~V~d~e~~~a~~~l~~~~gi~~epssa~alaa~~~~~~~--~~~~~~vv~i~tg~ 295 (303)
T 1o58_A 224 IGAGFVPKIL------DRSVIDEVITVEDEEAYEMARYLAKKEGLLVGISSGANVAAALKVAQK--LGPDARVVTVAPDH 295 (303)
T ss_dssp SCCSSCCTTC------CGGGCCEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHHT--SCTTCCEEEEECBB
T ss_pred CCCCCcCHHH------HHHhCCeEEEECHHHHHHHHHHHHHHcCceEcHHHHHHHHHHHHHHHH--cCCCCEEEEEECCC
Confidence 55432 3222 13446788999999999999986 779999999999999999998765 45788999999999
Q ss_pred CCCchHH
Q 009781 475 GLKFTQS 481 (526)
Q Consensus 475 g~K~~~~ 481 (526)
|.||++.
T Consensus 296 g~ky~~~ 302 (303)
T 1o58_A 296 AERYLSI 302 (303)
T ss_dssp GGGCTTT
T ss_pred CcccccC
Confidence 9999865
No 26
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=100.00 E-value=1.2e-48 Score=398.96 Aligned_cols=281 Identities=17% Similarity=0.200 Sum_probs=234.3
Q ss_pred hcccccCCCceecccccccccCCCcEEEEecCCCCCCchhhhhHHHHHHHHHHHHhcCCCceEEEEeccchHHHHHHHHH
Q 009781 164 VSAFEGNSNLFWAERFGKEFLQMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLKRMNKPVIGVGCASTGDTSAALSAYC 243 (526)
Q Consensus 164 vsl~eG~TPL~~~~~l~~~~lg~~~l~lK~E~~nPTGSFKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSGN~g~AlAa~a 243 (526)
+....|+|||++++++++. +| .+||+|+|++|||||||||++.+++..+.+.++..+ ..+|+++||||||.|+|++|
T Consensus 4 i~~~~~~TPL~~~~~l~~~-~g-~~v~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~~~~-g~~vv~~ssGN~g~a~A~~a 80 (303)
T 2v03_A 4 LEQTIGNTPLVKLQRMGPD-NG-SEVWLKLEGNNPAGSVKDRAALSMIVEAEKRGEIKP-GDVLIEATSGNTGIALAMIA 80 (303)
T ss_dssp GGGGSSCCCEEECSSSSCS-SS-CEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTCCCT-TCEEEEECSSHHHHHHHHHH
T ss_pred hHhhcCCCCcEECcccccc-cC-CEEEEEeccCCCCCCcHHHHHHHHHHHHHHcCCCCC-CCEEEEECCcHHHHHHHHHH
Confidence 3456899999999998876 67 489999999999999999999999988754322111 26899999999999999999
Q ss_pred HhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECC--CHHHHHHHHHHHHhc-CCeeeccCC-chhHHh-HHHHHHHHH
Q 009781 244 ASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDT--DFDGCMQLIREVTSE-LPIYLANSL-NSLRLE-GQKTAAIEI 318 (526)
Q Consensus 244 a~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g--~~dd~~~~~~~~~~~-~~~~~~ns~-Np~~i~-G~~T~a~EI 318 (526)
+++|++|+||||++ ++..|+.+++.+||+|+.+++ +++++.+.+++++++ .++ +++++ ||.+++ ||+|+++||
T Consensus 81 ~~~G~~~~iv~p~~-~~~~k~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~n~~~~~~g~~t~~~Ei 158 (303)
T 2v03_A 81 ALKGYRMKLLMPDN-MSQERRAAMRAYGAELILVTKEQGMEGARDLALEMANRGEGK-LLDQFNNPDNPYAHYTTTGPEI 158 (303)
T ss_dssp HHHTCEEEEEEETT-SCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHTTSCE-ECCTTTCTHHHHHHHHTHHHHH
T ss_pred HHcCCcEEEEECCC-CCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCc-ccCCcCChhhHHHhcCCcHHHH
Confidence 99999999999997 799999999999999999986 599999999999888 576 67765 898876 799999999
Q ss_pred HHHcCCCCCcEEEEeCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCchHHHHHHhCCccccccCCccccccccc
Q 009781 319 LQQFDWEVPDWVIVPGGNLGNIYAFYKGFQMCKELGLVDRIPRLVCAQAANANPLYLYYKSGWKDFKPVRANTTFASAIQ 398 (526)
Q Consensus 319 ~eQl~~~~pd~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prvi~Vq~~~~~~l~~a~~~G~~~~~~~~~~~Tia~~i~ 398 (526)
++|+++ .||+||+|+|+||+++|++++|+++ .|.+|||+||+++++++.. . +.+..+.
T Consensus 159 ~~q~~~-~~d~vvvpvG~GG~~~Gi~~~~k~~------~p~~~vigve~~~~~~~~~--------~------~gl~~~~- 216 (303)
T 2v03_A 159 WQQTGG-RITHFVSSMGTTGTITGVSRFMREQ------SKPVTIVGLQPEEGSSIPG--------I------RRWPTEY- 216 (303)
T ss_dssp HHHTTT-CCCEEEEECSSSHHHHHHHHHHHTS------SSCCEEEEEEECTTCCCTT--------C------CCCCGGG-
T ss_pred HHHhCC-CCCEEEEEeCccHhHHHHHHHHHHh------CCCCEEEEEcCCCCccccc--------C------CcCCCCC-
Confidence 999985 5999999999999999999988742 2678999999999776642 0 1111111
Q ss_pred cCCCccHHHHHHHHHhCCCeEEEeCHHHHHHHHHHH-HhcCCeecchHHHHHHHHHHHHHcCCCCCCCeEEEEECCCCCC
Q 009781 399 IGDPVSIDRAVYALKNCDGIVEEATEEELMDVSAQA-DSTGMFVCPHTGVALSALIKLRCKGVIGKTDKTVVVSTAHGLK 477 (526)
Q Consensus 399 i~~P~~~~~~l~~l~~~~g~~v~Vsd~ei~~A~~~l-~~~Gi~veP~sA~alAal~~l~~~g~i~~~~~vVvv~TG~g~K 477 (526)
.|.++. +...+.++.|+|+|++++++++ +++|+++||+||++++|++++.+++ ++++||+|+||++.|
T Consensus 217 --~~~~~~------~~~~d~~~~V~d~e~~~a~~~l~~~~gi~~~pssa~alaa~~~~~~~~---~~~~vv~i~tg~~~k 285 (303)
T 2v03_A 217 --LPGIFN------ASLVDEVLDIHQRDAENTMRELAVREGIFCGVSSGGAVAGALRVAAAN---PDAVVVAIICDRGDR 285 (303)
T ss_dssp --CCTTCC------GGGCSEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHHHS---TTCEEEEEECBBSGG
T ss_pred --CCcccc------hHHCCEEEEECHHHHHHHHHHHHHHcCceEcHHHHHHHHHHHHHHHHC---CCCeEEEEECCCCcc
Confidence 122111 2345678999999999999986 7799999999999999999988764 678999999999999
Q ss_pred chHHH
Q 009781 478 FTQSK 482 (526)
Q Consensus 478 ~~~~~ 482 (526)
|++.+
T Consensus 286 y~~~~ 290 (303)
T 2v03_A 286 YLSTG 290 (303)
T ss_dssp GGGGT
T ss_pred cccch
Confidence 99874
No 27
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=100.00 E-value=1.3e-48 Score=401.97 Aligned_cols=293 Identities=18% Similarity=0.159 Sum_probs=241.2
Q ss_pred hhcccccCCCceecccccccccCCCcEEEEecCCCCCCchhhhhHHHHHHHHHHHHhcCCCceEEEEeccchHHHHHHHH
Q 009781 163 IVSAFEGNSNLFWAERFGKEFLQMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLKRMNKPVIGVGCASTGDTSAALSAY 242 (526)
Q Consensus 163 ~vsl~eG~TPL~~~~~l~~~~lg~~~l~lK~E~~nPTGSFKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSGN~g~AlAa~ 242 (526)
.++..+|+|||++++++++. +| .+||+|+|++|||||||||++.+++..+.+.+....+..+|+++||||||.|+|++
T Consensus 8 ~i~~~~~~TPL~~~~~l~~~-~g-~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~G~~~~~~~~vv~assGN~g~alA~a 85 (322)
T 1z7w_A 8 DVTELIGNTPLVYLNNVAEG-CV-GRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIKPGESVLIEPTSGNTGVGLAFT 85 (322)
T ss_dssp SGGGGSSCCCEEECCGGGTT-CS-SEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTSCCTTTCEEEEECSSHHHHHHHHH
T ss_pred HHHHhcCCCCeEECcccccc-CC-ceEEEEecccCCCCchHHHHHHHHHHHHHHcCCCCCCCCEEEEeCCCHHHHHHHHH
Confidence 35678999999999998775 55 48999999999999999999999998875432211122589999999999999999
Q ss_pred HHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCC--HHHHHHHHHHHHhcC-CeeeccCC-chhHH-hHHHHHHHH
Q 009781 243 CASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDTD--FDGCMQLIREVTSEL-PIYLANSL-NSLRL-EGQKTAAIE 317 (526)
Q Consensus 243 aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~--~dd~~~~~~~~~~~~-~~~~~ns~-Np~~i-~G~~T~a~E 317 (526)
|+++|++|+||||.+ ++..|+.+++.+||+|+.++++ ++++.+.+++++++. ++++++++ ||..+ .||+|+++|
T Consensus 86 a~~~G~~~~iv~p~~-~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~~~~~~~~~~~i~~~~n~~~~~~g~~t~~~E 164 (322)
T 1z7w_A 86 AAAKGYKLIITMPAS-MSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPE 164 (322)
T ss_dssp HHHHTCEEEEEEETT-SCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTEEECCTTTCTHHHHHHHHTHHHH
T ss_pred HHHcCCCEEEEeCCC-CCHHHHHHHHHcCCEEEEeCCCCCHHHHHHHHHHHHHhCCCeEeCCCCCChhHHHHHHHHHHHH
Confidence 999999999999997 7999999999999999999874 789999999998887 78888875 67764 589999999
Q ss_pred HHHHcCCCCCcEEEEeCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCchHHHHHHhCCccccccCCcccccccc
Q 009781 318 ILQQFDWEVPDWVIVPGGNLGNIYAFYKGFQMCKELGLVDRIPRLVCAQAANANPLYLYYKSGWKDFKPVRANTTFASAI 397 (526)
Q Consensus 318 I~eQl~~~~pd~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prvi~Vq~~~~~~l~~a~~~G~~~~~~~~~~~Tia~~i 397 (526)
|++|+++ .||+||+|+|+||+++|++++|+++ .|.+|||+||+++++.+. .|+ .. ..+ .+++
T Consensus 165 i~~q~~~-~~d~vvvpvG~GG~~~Gi~~~~k~~------~p~~~vigve~~~~~~~~----~~~--~~----~~~-~~gl 226 (322)
T 1z7w_A 165 IWKGTGG-KIDGFVSGIGTGGTITGAGKYLKEQ------NANVKLYGVEPVESAILS----GGK--PG----PHK-IQGI 226 (322)
T ss_dssp HHHHTTT-CCCEEEEECSSSHHHHHHHHHHHHH------CTTCEEEEEEEGGGCGGG----TCC--CC----CCS-CTTS
T ss_pred HHHHhcC-CCCEEEEecCccHhHHHHHHHHHHc------CCCCEEEEEecCCCcccc----CCC--CC----Ccc-cCcC
Confidence 9999974 6999999999999999999999864 267899999999976653 332 11 112 3555
Q ss_pred ccCC-CccHHHHHHHHHhCCCeEEEeCHHHHHHHHHHH-HhcCCeecchHHHHHHHHHHHHHcCCCCCCCeEEEEECCCC
Q 009781 398 QIGD-PVSIDRAVYALKNCDGIVEEATEEELMDVSAQA-DSTGMFVCPHTGVALSALIKLRCKGVIGKTDKTVVVSTAHG 475 (526)
Q Consensus 398 ~i~~-P~~~~~~l~~l~~~~g~~v~Vsd~ei~~A~~~l-~~~Gi~veP~sA~alAal~~l~~~g~i~~~~~vVvv~TG~g 475 (526)
.++. |.++ .+...+.++.|+|+|++++++++ +++|+++||++|++++|++++.+++. .++++||+++||+|
T Consensus 227 ~~~~~~~~~------~~~~~~~~~~V~d~e~~~a~~~l~~~~gi~~~pssga~~aaa~~~~~~~~-~~~~~vv~i~tg~g 299 (322)
T 1z7w_A 227 GAGFIPSVL------NVDLIDEVVQVSSDESIDMARQLALKEGLLVGISSGAAAAAAIKLAQRPE-NAGKLFVAIFPSFG 299 (322)
T ss_dssp CCSSCCTTC------CGGGCSEEEEECHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHHHHHTSGG-GTTCEEEEEECBBG
T ss_pred cCCCCChhh------hHHhCCEEEEECHHHHHHHHHHHHHHcCceEchhHHHHHHHHHHHHHhcC-CCCCeEEEEECCCC
Confidence 5443 2221 24456788999999999999986 77999999999999999998876542 36789999999999
Q ss_pred CCchHHHH
Q 009781 476 LKFTQSKI 483 (526)
Q Consensus 476 ~K~~~~~~ 483 (526)
.||.+.++
T Consensus 300 ~k~~~~~~ 307 (322)
T 1z7w_A 300 ERYLSTVL 307 (322)
T ss_dssp GGGTTSGG
T ss_pred cccccchh
Confidence 99998743
No 28
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=100.00 E-value=1.1e-48 Score=406.06 Aligned_cols=291 Identities=17% Similarity=0.153 Sum_probs=241.4
Q ss_pred chhcccccCCCceecccccc----cccCCCcEEEEecCCCCCCchhhhhHHHHHHHHHHHHhcCCCceEEEEeccchHHH
Q 009781 162 DIVSAFEGNSNLFWAERFGK----EFLQMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLKRMNKPVIGVGCASTGDTSA 237 (526)
Q Consensus 162 ~~vsl~eG~TPL~~~~~l~~----~~lg~~~l~lK~E~~nPTGSFKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSGN~g~ 237 (526)
+.++...|+|||++++++++ . +|. +||+|+|++|||||||||++.+++..+.+.+...+ ..+|+++||||||.
T Consensus 15 ~~i~~~~g~TPL~~~~~l~~~~~~~-~g~-~v~~K~E~~~ptGSfKdR~a~~~l~~a~~~g~~~~-g~~vv~aSsGN~g~ 91 (343)
T 2pqm_A 15 HNILETIGGTPLVELHGVTEHPRIK-KGT-RILVKLEYFNPMSSVKDRVGFNIVYQAIKDGRLKP-GMEIIESTSGNTGI 91 (343)
T ss_dssp SSGGGGSSCCCEEECCGGGCSTTSC-TTC-EEEEEEGGGSTTSBTHHHHHHHHHHHHHHHTSSCT-TCEEEEECSSHHHH
T ss_pred HHHHhhcCCCCeEECCccccccccc-cCc-EEEEEeccCCCCCChHHHHHHHHHHHHHHcCCCCC-CCEEEEECCcHHHH
Confidence 34667889999999999876 5 564 89999999999999999999999998865432222 25899999999999
Q ss_pred HHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECC--CHHHHHHHHHHHHhcCCe--eeccCC-chhHH-hHH
Q 009781 238 ALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDT--DFDGCMQLIREVTSELPI--YLANSL-NSLRL-EGQ 311 (526)
Q Consensus 238 AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g--~~dd~~~~~~~~~~~~~~--~~~ns~-Np~~i-~G~ 311 (526)
|+|++|+++|++|+||||++ ++..|+.+++.+||+|+.+++ +++++.+.+++++++.+. |+++++ ||..+ .||
T Consensus 92 alA~aa~~~G~~~~iv~p~~-~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~~~~~n~~n~~~g~ 170 (343)
T 2pqm_A 92 ALCQAGAVFGYRVNIAMPST-MSVERQMIMKAFGAELILTEGKKGMPGAIEEVNKMIKENPGKYFVANQFGNPDNTAAHH 170 (343)
T ss_dssp HHHHHHHHHTCCEEEEEETT-SCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHSTTTEEECCTTTCHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEECCC-CCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCcEEECCCCCChhHHHHHH
Confidence 99999999999999999997 799999999999999999997 489999999999887654 677775 78864 789
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCchHHHHHHhCCccccccCCcc
Q 009781 312 KTAAIEILQQFDWEVPDWVIVPGGNLGNIYAFYKGFQMCKELGLVDRIPRLVCAQAANANPLYLYYKSGWKDFKPVRANT 391 (526)
Q Consensus 312 ~T~a~EI~eQl~~~~pd~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prvi~Vq~~~~~~l~~a~~~G~~~~~~~~~~~ 391 (526)
+|++ ||++|+++ .||+||+|+|+||+++|++++|+++ + |.+|||+||+++++.+. .++ ...
T Consensus 171 ~t~~-Ei~~q~~~-~~d~vvvpvG~GG~~~Gi~~~~k~~---~---p~~~vigVe~~~~~~~~----~~~-------~~~ 231 (343)
T 2pqm_A 171 YTAN-EIWEDTDG-EVDIVVSAVGTSGTVIGVAEKLKEK---K---KGIKIIAVEPEESAVLE----GKA-------KGP 231 (343)
T ss_dssp HHHH-HHHHHTTT-CEEEEEEECSSSHHHHHHHHHHHHH---C---TTCEEEEEEEGGGCTTT----TCC-------CCC
T ss_pred HHHH-HHHHHcCC-CCCEEEEecCCchhHHHHHHHHHHc---C---CCCEEEEEecCCCcccc----cCC-------CCC
Confidence 9999 99999985 5999999999999999999998864 2 66899999999975443 221 113
Q ss_pred ccccccccCC-CccHHHHHHHHHhCCCeEEEeCHHHHHHHHHHH-HhcCCeecchHHHHHHHHHHHHHcCCCCCCCeEEE
Q 009781 392 TFASAIQIGD-PVSIDRAVYALKNCDGIVEEATEEELMDVSAQA-DSTGMFVCPHTGVALSALIKLRCKGVIGKTDKTVV 469 (526)
Q Consensus 392 Tia~~i~i~~-P~~~~~~l~~l~~~~g~~v~Vsd~ei~~A~~~l-~~~Gi~veP~sA~alAal~~l~~~g~i~~~~~vVv 469 (526)
+..+++..+. |.++ .+...+.++.|+|+|++++++++ +++|+++||+||+++||++++.+++ ..++++||+
T Consensus 232 ~~~~gl~~~~~~~~~------~~~~~d~~~~Vsd~e~~~a~~~l~~~~gi~~epssa~alaa~~~~~~~~-~~~~~~vv~ 304 (343)
T 2pqm_A 232 HGIQGIGAGFIPDIY------KKEFVDEIIPIKTQDAWKMARAVVKYDGIMCGMSSGAAILAGLKEAEKP-ENEGKTIVI 304 (343)
T ss_dssp CCCTTCCCSSCCTTC------CGGGCCEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHTSG-GGTTCEEEE
T ss_pred eecCccCCCCCCHHH------HHHhCCeEEEECHHHHHHHHHHHHHHhCCeEchhHHHHHHHHHHHHHhc-CCCCCeEEE
Confidence 4456665442 3322 23456788999999999999986 7799999999999999999988765 346889999
Q ss_pred EECCCCCCchHHH
Q 009781 470 VSTAHGLKFTQSK 482 (526)
Q Consensus 470 v~TG~g~K~~~~~ 482 (526)
|+||+|.||++.+
T Consensus 305 i~tg~g~ky~~~~ 317 (343)
T 2pqm_A 305 IVPSCGERYLSTD 317 (343)
T ss_dssp EECBBGGGGTTSS
T ss_pred EEcCCCccccchh
Confidence 9999999999874
No 29
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=100.00 E-value=1.4e-48 Score=402.38 Aligned_cols=282 Identities=15% Similarity=0.165 Sum_probs=235.7
Q ss_pred cccCCCceecccccccc------cCCCcEEEEecCCCCCCchhhhhHHHHHHHHHHHHhcCCCceEEEEeccchHHHHHH
Q 009781 167 FEGNSNLFWAERFGKEF------LQMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLKRMNKPVIGVGCASTGDTSAALS 240 (526)
Q Consensus 167 ~eG~TPL~~~~~l~~~~------lg~~~l~lK~E~~nPTGSFKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSGN~g~AlA 240 (526)
..|+|||++++++++.. .| .+||+|+|++|||||||||++.+++..+.+.+...+ ..+|+++||||||.|+|
T Consensus 12 ~ig~TPL~~~~~l~~~~~~~~~~~g-~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~g~l~~-~~~vv~aSsGN~g~alA 89 (325)
T 3dwg_A 12 ALGNTPLVGLQRLSPRWDDGRDGPH-VRLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLLRP-GATILEPTSGNTGISLA 89 (325)
T ss_dssp GCSCCCEEECTTTSSBSSCBTTBCC-EEEEEEETTSSTTSBTTHHHHHHHHHHHHHTTCCCT-TCEEEEECSSHHHHHHH
T ss_pred hcCCCCcEEccccchhhcccccCCC-cEEEEEECCCCCCCChHHHHHHHHHHHHHHcCCCCC-CCEEEEeCCcHHHHHHH
Confidence 46889999999887641 23 489999999999999999999999998765432222 26899999999999999
Q ss_pred HHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECC--CHHHHHHHHHHHHhcCC-eeeccCC-chhHH-hHHHHHH
Q 009781 241 AYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDT--DFDGCMQLIREVTSELP-IYLANSL-NSLRL-EGQKTAA 315 (526)
Q Consensus 241 a~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g--~~dd~~~~~~~~~~~~~-~~~~ns~-Np~~i-~G~~T~a 315 (526)
++|+++|++|+||||++ ++..|+.+++.+||+|+.+++ +++++.+.+++++++.+ +++++++ ||..+ .||+|++
T Consensus 90 ~aa~~~G~~~~iv~p~~-~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~np~~~~~g~~t~~ 168 (325)
T 3dwg_A 90 MAARLKGYRLICVMPEN-TSVERRQLLELYGAQIIFSAAEGGSNTAVATAKELAATNPSWVMLYQYGNPANTDSHYCGTG 168 (325)
T ss_dssp HHHHHHTCEEEEEEESS-SCHHHHHHHHHHTCEEEEECSTTTHHHHHHHHHHHHHHCTTSBCCCTTTCHHHHHHHHHTHH
T ss_pred HHHHHcCCcEEEEECCC-CCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEeCCCCCCHHHHHHHHHHHH
Confidence 99999999999999997 799999999999999999987 58999999999988876 8888875 79887 5999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCchHHHHHHhCCccccccCCcccccc
Q 009781 316 IEILQQFDWEVPDWVIVPGGNLGNIYAFYKGFQMCKELGLVDRIPRLVCAQAANANPLYLYYKSGWKDFKPVRANTTFAS 395 (526)
Q Consensus 316 ~EI~eQl~~~~pd~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prvi~Vq~~~~~~l~~a~~~G~~~~~~~~~~~Tia~ 395 (526)
+||++|++. ||+||+|+|+||+++|++++|+++ .|.+|||+||+++++.+. + ..++.+
T Consensus 169 ~Ei~~q~~~--~d~vv~pvG~GG~~aGi~~~~k~~------~p~~~vigVe~~~~~~~~-----~---------~~~i~~ 226 (325)
T 3dwg_A 169 PELLADLPE--ITHFVAGLGTTGTLMGTGRFLREH------VANVKIVAAEPRYGEGVY-----A---------LRNMDE 226 (325)
T ss_dssp HHHHHHCTT--CCEEEEECSSSHHHHHHHHHHHHH------STTCEEEEEEEECCGGGG-----C---------CSSGGG
T ss_pred HHHHHhcCC--CCEEEEecCchHHHHHHHHHHHHh------CCCCEEEEEeeCCCcchh-----c---------cCcccC
Confidence 999999983 999999999999999999998864 167899999999976551 1 234444
Q ss_pred ccccCCCccHHHHHHHHHhCCCeEEEeCHHHHHHHHHHH-HhcCCeecchHHHHHHHHHHHHHcCCCCCCCe--EEEEEC
Q 009781 396 AIQIGDPVSIDRAVYALKNCDGIVEEATEEELMDVSAQA-DSTGMFVCPHTGVALSALIKLRCKGVIGKTDK--TVVVST 472 (526)
Q Consensus 396 ~i~i~~P~~~~~~l~~l~~~~g~~v~Vsd~ei~~A~~~l-~~~Gi~veP~sA~alAal~~l~~~g~i~~~~~--vVvv~T 472 (526)
++ .|.++ .+...+.++.|+|+|++++++++ +++|+++||++|++++|++++.+++ ..++++ ||+|+|
T Consensus 227 ~~---~~~~~------~~~~~d~~~~V~d~e~~~a~~~l~~~egi~~epssa~a~aa~~~~~~~~-~~~g~~~~Vv~i~~ 296 (325)
T 3dwg_A 227 GF---VPELY------DPEILTARYSVGAVDAVRRTRELVHTEGIFAGISTGAVLHAALGVGAGA-LAAGERADIALVVA 296 (325)
T ss_dssp CC---CCTTC------CGGGCSEEEEEEHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHHHH-HHHTCCEEEEEEEC
T ss_pred Cc---Ccccc------cHhhCCeEEEECHHHHHHHHHHHHHHcCceechhHHHHHHHHHHHHHHh-ccCCCCCeEEEEEC
Confidence 43 23322 13556788999999999999986 7799999999999999999887653 124566 999999
Q ss_pred CCCCCchHH-HH
Q 009781 473 AHGLKFTQS-KI 483 (526)
Q Consensus 473 G~g~K~~~~-~~ 483 (526)
|+|.||.+. ++
T Consensus 297 g~g~ky~~~~~~ 308 (325)
T 3dwg_A 297 DAGWKYLSTGAY 308 (325)
T ss_dssp BBGGGGGGGTTT
T ss_pred CCCccccCchhh
Confidence 999999988 54
No 30
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=100.00 E-value=3.1e-48 Score=411.62 Aligned_cols=294 Identities=19% Similarity=0.191 Sum_probs=247.1
Q ss_pred chhcccccCCCceecccccccccCCCcEEEEecCCCCCCchhhhhHHHHHHHHHHHHhcCCCceEEEEeccchHHHHHHH
Q 009781 162 DIVSAFEGNSNLFWAERFGKEFLQMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLKRMNKPVIGVGCASTGDTSAALSA 241 (526)
Q Consensus 162 ~~vsl~eG~TPL~~~~~l~~~~lg~~~l~lK~E~~nPTGSFKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSGN~g~AlAa 241 (526)
+.++...|+|||++++++++. +| .+||+|+|++|||||||||++.+++..+.+.+....+..+|+++|+||||.|+|+
T Consensus 115 ~~i~~~ig~TPLv~l~~Ls~~-~g-~~I~lK~E~lnptGSfKdRgA~~~i~~A~~~G~l~~g~~~VV~aSsGNhG~AlA~ 192 (430)
T 4aec_A 115 DNVSQLIGKTPMVYLNSIAKG-CV-ANIAAKLEIMEPCCSVKDRIGYSMVTDAEQKGFISPGKSVLVEPTSGNTGIGLAF 192 (430)
T ss_dssp SSGGGGSSCCCEEECCGGGTT-CS-SEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTSCCTTTCEEEEECSSHHHHHHHH
T ss_pred hhhhccCCCCCeEEChhhhhh-cC-CeEEEEECCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCcEEEEECCCHHHHHHHH
Confidence 457788999999999998876 66 4899999999999999999999999887543222222368999999999999999
Q ss_pred HHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECC--CHHHHHHHHHHHHhcC-CeeeccCC-chhH-HhHHHHHHH
Q 009781 242 YCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDT--DFDGCMQLIREVTSEL-PIYLANSL-NSLR-LEGQKTAAI 316 (526)
Q Consensus 242 ~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g--~~dd~~~~~~~~~~~~-~~~~~ns~-Np~~-i~G~~T~a~ 316 (526)
+|+++|++|+||||++ ++..|+.+++.+||+|+.+++ +++++.+.+++++++. ++|+++++ ||.. +.||+|+++
T Consensus 193 aAa~~Gl~~~IvmP~~-~s~~k~~~~r~~GAeVv~v~~~~~~~~a~~~a~el~~~~~~~~~i~~~~np~~~~aG~~T~a~ 271 (430)
T 4aec_A 193 IAASRGYRLILTMPAS-MSMERRVLLKAFGAELVLTDPAKGMTGAVQKAEEILKNTPDAYMLQQFDNPANPKIHYETTGP 271 (430)
T ss_dssp HHHHHTCEEEEEEETT-SCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHSTTEEECCTTTCTHHHHHHHHTHHH
T ss_pred HHHHhCCEEEEEEcCC-CCHHHHHHHHHCCCEEEEECCCCChHHHHHHHHHHHHhcCCcEEecCCCCccHHHHHHHHHHH
Confidence 9999999999999997 799999999999999999974 5899999999998876 68888875 7887 789999999
Q ss_pred HHHHHcCCCCCcEEEEeCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCchHHHHHHhCCccccccCCccccccc
Q 009781 317 EILQQFDWEVPDWVIVPGGNLGNIYAFYKGFQMCKELGLVDRIPRLVCAQAANANPLYLYYKSGWKDFKPVRANTTFASA 396 (526)
Q Consensus 317 EI~eQl~~~~pd~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prvi~Vq~~~~~~l~~a~~~G~~~~~~~~~~~Tia~~ 396 (526)
||++|+++ .||+||+|+|+||+++|++++|++. .|.+|||+||+++++.+. .|+. ..+..++
T Consensus 272 EI~eQl~~-~~D~vVvpvG~GGtlaGi~~~lk~~------~p~~kVigVep~~s~~l~----~g~~-------~~~~i~G 333 (430)
T 4aec_A 272 EIWDDTKG-KVDIFVAGIGTGGTITGVGRFIKEK------NPKTQVIGVEPTESDILS----GGKP-------GPHKIQG 333 (430)
T ss_dssp HHHHHTTS-CEEEEEEECSSSHHHHHHHHHHHHH------CTTSEEEEEEEGGGCGGG----TCCC-------CCCSCTT
T ss_pred HHHHHcCC-CCCEEEEeCCccHHHHHHHHHHHHh------CCCCEEEEEEeCCCcHhh----CCCc-------cceeehh
Confidence 99999974 6999999999999999999999864 267899999999977653 3421 2344567
Q ss_pred cccCC-CccHHHHHHHHHhCCCeEEEeCHHHHHHHHHHH-HhcCCeecchHHHHHHHHHHHHHcCCCCCCCeEEEEECCC
Q 009781 397 IQIGD-PVSIDRAVYALKNCDGIVEEATEEELMDVSAQA-DSTGMFVCPHTGVALSALIKLRCKGVIGKTDKTVVVSTAH 474 (526)
Q Consensus 397 i~i~~-P~~~~~~l~~l~~~~g~~v~Vsd~ei~~A~~~l-~~~Gi~veP~sA~alAal~~l~~~g~i~~~~~vVvv~TG~ 474 (526)
|+.+. |.++. ++..+.++.|+|+|++++++++ +++|+++||++|++++|+.++.+++. .++++||+|+|++
T Consensus 334 l~~~~~p~~l~------~~~vd~~v~Vsd~ea~~a~r~La~~eGi~vepssGaa~aAal~la~~~~-~~g~~VV~Il~d~ 406 (430)
T 4aec_A 334 IGAGFIPKNLD------QKIMDEVIAISSEEAIETAKQLALKEGLMVGISSGAAAAAAIKVAKRPE-NAGKLIAVVFPSF 406 (430)
T ss_dssp SCCSSCCTTCC------TTTCSEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHTTSGG-GTTCEEEEEECBB
T ss_pred ccCCCCcHHHH------HHhCCeEEEECHHHHHHHHHHHHHHCCCEEehHHHHHHHHHHHHHHhcC-CCcCeEEEEECCC
Confidence 76653 44332 3456788999999999999986 77999999999999999999877653 3688999999999
Q ss_pred CCCchHHHH
Q 009781 475 GLKFTQSKI 483 (526)
Q Consensus 475 g~K~~~~~~ 483 (526)
|.||.+.++
T Consensus 407 G~rylst~~ 415 (430)
T 4aec_A 407 GERYLSTPL 415 (430)
T ss_dssp GGGGTTSHH
T ss_pred Cccccchhh
Confidence 999998743
No 31
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=100.00 E-value=1.8e-47 Score=396.82 Aligned_cols=289 Identities=15% Similarity=0.142 Sum_probs=229.4
Q ss_pred ccCCCceecccccccccCCCcEEEEecCCCCCCchhhhhHHHHHHHHHHHHhcCCCceEEEEeccchHHHHHHHHHHhcC
Q 009781 168 EGNSNLFWAERFGKEFLQMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLKRMNKPVIGVGCASTGDTSAALSAYCASAG 247 (526)
Q Consensus 168 eG~TPL~~~~~l~~~~lg~~~l~lK~E~~nPTGSFKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSGN~g~AlAa~aa~~G 247 (526)
-|+|||+++++|++. +|. +||+|+|++|||||||||++.+++..+.+.+....+..+|+++||||||.|+|++|+++|
T Consensus 33 IG~TPLv~~~~Ls~~-~G~-~IylK~E~lnptGSfK~RgA~~~i~~a~~~g~l~~g~~~Vv~aSsGN~g~alA~~aa~~G 110 (344)
T 3vc3_A 33 IGRTPLVYLNKVTEG-CGA-YVAVKQEMMQPTASIADRPAYAMITDAEEKNLITPGKTTLIEPTSGNMGISMAFMAAMKG 110 (344)
T ss_dssp SCCCCEEECCSTTTT-CCS-EEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTCCCTTTCEEEEECSSHHHHHHHHHHHHHT
T ss_pred cCCCceEECcccchh-hCC-EEEEEecCCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCEEEEeCCcHHHHHHHHHHHHcC
Confidence 589999999999987 786 899999999999999999999999988654333333468999999999999999999999
Q ss_pred CCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCCH--HHHHHHHHH-HHhcCCeeeccCC-chhH-HhHHHHHHHHHHHHc
Q 009781 248 VPSIVFLPANKISIAQLVQPIANGAFVLSLDTDF--DGCMQLIRE-VTSELPIYLANSL-NSLR-LEGQKTAAIEILQQF 322 (526)
Q Consensus 248 i~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~~--dd~~~~~~~-~~~~~~~~~~ns~-Np~~-i~G~~T~a~EI~eQl 322 (526)
++|+||||++ ++..|+.+|+.|||+|+.+++.. +++...+.+ ..++.+.++.+++ ||.. +.||+|+++||++|+
T Consensus 111 ~~~~IvmP~~-~~~~k~~~~~~~GA~Vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~np~~~~a~~~t~g~EI~eq~ 189 (344)
T 3vc3_A 111 YKMVLTMPSY-TSLERRVTMRAFGAELILTDPAKGMGGTVKKAYELLENTPNAHMLQQFSNPANTQVHFETTGPEIWEDT 189 (344)
T ss_dssp CEEEEEEETT-SCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHSTTEECCCTTTCHHHHHHHHHTHHHHHHHHT
T ss_pred CcEEEEECCC-ChHHHHHHHHHcCCEEEEECCCCcchHHHHHHHHHHhhccCceeccccccchhHHHHHHHHHHHHHHHh
Confidence 9999999997 79999999999999999998643 333333333 3445577777775 7875 567999999999999
Q ss_pred CCCCCcEEEEeCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCchHHHHHHhCCccccccCCccccccccccCCC
Q 009781 323 DWEVPDWVIVPGGNLGNIYAFYKGFQMCKELGLVDRIPRLVCAQAANANPLYLYYKSGWKDFKPVRANTTFASAIQIGDP 402 (526)
Q Consensus 323 ~~~~pd~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prvi~Vq~~~~~~l~~a~~~G~~~~~~~~~~~Tia~~i~i~~P 402 (526)
++ .||+||+|+|+||+++|++++|++. .|.+|+|+|||.+++.+. .++.. .....++.+..+
T Consensus 190 ~~-~~d~vv~~vGgGG~~~Gi~~~~k~~------~p~v~vigVep~~s~~l~----~~~~~-------~~~i~g~g~~~~ 251 (344)
T 3vc3_A 190 NG-QVDIFVMGIGSGGTVSGVGQYLKSK------NPNVKIYGVEPSESNVLN----GGKPG-------PHHITGNGVGFK 251 (344)
T ss_dssp TT-CCCEEEEECSSSHHHHHHHHHHHHH------CTTCEEEEEEEGGGCGGG----TCCCC-------CCSCTTSCCSSC
T ss_pred CC-CceEEEEecCCccchHHHhhhhHhh------CCCceEEEEcCCCChhhc----CCCCC-------CeeEeccccccc
Confidence 75 6999999999999999999988864 267899999999976543 23211 111123332222
Q ss_pred ccHHHHHHHHHhCCCeEEEeCHHHHHHHHHHH-HhcCCeecchHHHHHHHHHHHHHcCCCCCCCeEEEEECCCCCCchHH
Q 009781 403 VSIDRAVYALKNCDGIVEEATEEELMDVSAQA-DSTGMFVCPHTGVALSALIKLRCKGVIGKTDKTVVVSTAHGLKFTQS 481 (526)
Q Consensus 403 ~~~~~~l~~l~~~~g~~v~Vsd~ei~~A~~~l-~~~Gi~veP~sA~alAal~~l~~~g~i~~~~~vVvv~TG~g~K~~~~ 481 (526)
... ...+..+.++.|+|+|+++++++| +++|++++|+||++++|++++.+.. ..++++||+|+|++|.||.+.
T Consensus 252 ~~~-----~~~~~~d~~v~v~d~eai~a~~~L~~~eGi~v~~ssga~~~aAl~~a~~~-~~~g~~VV~il~d~G~rYlst 325 (344)
T 3vc3_A 252 PDI-----LDLDVMEKVLEVSSEDAVNMARVLALKEGLMVGISSGANTVAALRLAQLP-ENKGKLIVTVHPSFGERYLSS 325 (344)
T ss_dssp CTT-----CCGGGCSEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHTSG-GGTTCEEEEEECBBGGGGTTS
T ss_pred Ccc-----cchhhceEEEEECHHHHHHHHHHHHHHCCCEEehhHHHHHHHHHHHhccc-cCCCCEEEEEECCCchhhccc
Confidence 111 013445778999999999999986 7899999999999999888877543 247889999999999999887
Q ss_pred HH
Q 009781 482 KI 483 (526)
Q Consensus 482 ~~ 483 (526)
++
T Consensus 326 ~~ 327 (344)
T 3vc3_A 326 VL 327 (344)
T ss_dssp TT
T ss_pred hh
Confidence 53
No 32
>1jbq_A B, cystathionine beta-synthase, serine sulfhydrase; fold type II of PLP enzymes, lyase; HET: HEM PLP; 2.60A {Homo sapiens} SCOP: c.79.1.1 PDB: 1m54_A*
Probab=100.00 E-value=4.3e-45 Score=389.07 Aligned_cols=294 Identities=17% Similarity=0.169 Sum_probs=231.9
Q ss_pred cccccCCCceecccccccccCCC-cEEEEecCCCCCCchhhhhHHHHHHHHHHHHhcCCCceEEEEeccchHHHHHHHHH
Q 009781 165 SAFEGNSNLFWAERFGKEFLQMN-DLWVKHCGISHTGSFKDLGMTVLVSQVNRLKRMNKPVIGVGCASTGDTSAALSAYC 243 (526)
Q Consensus 165 sl~eG~TPL~~~~~l~~~~lg~~-~l~lK~E~~nPTGSFKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSGN~g~AlAa~a 243 (526)
.-..|+|||++++++++. +|++ +||+|+|++|||||||||++.+++..+.+.+++. +..+|+++||||||+|+|++|
T Consensus 103 ~~~ig~TPLv~l~~Ls~~-~G~~~~v~lK~E~~nptGSfKdR~a~~~i~~a~~~G~l~-~g~tVV~aSsGN~G~AlA~aa 180 (435)
T 1jbq_A 103 LKKIGDTPMVRINKIGKK-FGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGTLK-PGDTIIEPTSGNTGIGLALAA 180 (435)
T ss_dssp GGGSSCCCEEECCSHHHH-TTCCSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHHTCSC-TTCEEEEECSSHHHHHHHHHH
T ss_pred HhhCCCCCeEECcchhhH-hCCCceEEEEECCCCCcCCHHHHHHHHHHHHHHHcCCCC-CCCEEEEeCCCHHHHHHHHHH
Confidence 346789999999998876 7753 8999999999999999999999998775433221 236899999999999999999
Q ss_pred HhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECC--CHHHH---HHHHHHHHhcC-CeeeccCC-chh-HHhHHHHHH
Q 009781 244 ASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDT--DFDGC---MQLIREVTSEL-PIYLANSL-NSL-RLEGQKTAA 315 (526)
Q Consensus 244 a~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g--~~dd~---~~~~~~~~~~~-~~~~~ns~-Np~-~i~G~~T~a 315 (526)
+++|++|+||||++ ++..|+.+++.+||+|+.+++ +++++ .+.+++++++. +.|+++++ ||. .+.||+|++
T Consensus 181 a~~Gi~~~IvmP~~-~s~~k~~~l~~~GAeVv~v~~~~~~d~~~~~~~~a~~la~~~~~~~~i~q~~n~~n~~ag~~t~a 259 (435)
T 1jbq_A 181 AVRGYRCIIVMPEK-MSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHYDTTA 259 (435)
T ss_dssp HHHTCEEEEEECSC-CCHHHHHHHHHTTCEEEECCC-------CCHHHHHHHHHHHSTTEECCCTTTCTHHHHHHHHTHH
T ss_pred HHcCCeEEEEeCCC-CCHHHHHHHHhCCCEEEEecCCCCcchHHHHHHHHHHHHHhcCCeEEeCccCCcccHHHHHHHHH
Confidence 99999999999997 799999999999999999985 47664 46677777665 56777764 564 367899999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCchH-HHHHHhCCccccccCCccccc
Q 009781 316 IEILQQFDWEVPDWVIVPGGNLGNIYAFYKGFQMCKELGLVDRIPRLVCAQAANANPL-YLYYKSGWKDFKPVRANTTFA 394 (526)
Q Consensus 316 ~EI~eQl~~~~pd~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prvi~Vq~~~~~~l-~~a~~~G~~~~~~~~~~~Tia 394 (526)
+||++|+++ .+|+||+|+|+||+++|++++|++. .|..|||+||++++..+ ...+..+. ...+.+
T Consensus 260 ~EI~eQl~~-~~D~vVvpvGtGGtlaGi~~~lk~~------~p~vrVigVep~gs~~~~~~~l~~~~-------~~~~~~ 325 (435)
T 1jbq_A 260 DEILQQCDG-KLDMLVASVGTGGTITGIARKLKEK------CPGCRIIGVDPEGSILAEPEELNQTE-------QTTYEV 325 (435)
T ss_dssp HHHHHHHTT-CCCEEEEECSSSHHHHHHHHHHHHH------CTTCEEEEEEETTCSCSSSGGGGCCS-------CCCCSC
T ss_pred HHHHHHcCC-CCCEEEEecCCcHhHHHHHHHHHHh------CCCCEEEEEecCCchhhchhhhhcCC-------Ccceee
Confidence 999999974 5899999999999999999999863 16679999999996432 12232221 123455
Q ss_pred cccccCCC-ccHHHHHHHHHhCCCeEEEeCHHHHHHHHHHH-HhcCCeecchHHHHHHHHHHHHHcCCCCCCCeEEEEEC
Q 009781 395 SAIQIGDP-VSIDRAVYALKNCDGIVEEATEEELMDVSAQA-DSTGMFVCPHTGVALSALIKLRCKGVIGKTDKTVVVST 472 (526)
Q Consensus 395 ~~i~i~~P-~~~~~~l~~l~~~~g~~v~Vsd~ei~~A~~~l-~~~Gi~veP~sA~alAal~~l~~~g~i~~~~~vVvv~T 472 (526)
+++....+ ..+. +...+.++.|+|+|++++++++ +++|+++||++|++++|++++.++ +.++++||+|+|
T Consensus 326 ~gig~~~~~~~l~------~~~vd~~~~Vsd~ea~~a~r~La~~eGilve~ssgaalaaa~~~~~~--~~~g~~VV~ilt 397 (435)
T 1jbq_A 326 EGIGYDFIPTVLD------RTVVDKWFKSNDEEAFTFARMLIAQEGLLCGGSAGSTVAVAVKAAQE--LQEGQRCVVILP 397 (435)
T ss_dssp CSCCCSSCCTTCC------GGGCCEEEEECHHHHHHHHHHHHHHSCCCBCHHHHHHHHHHHHHGGG--CCTTCEEEEEEC
T ss_pred cccccCccchhhh------hhhccceEEeCHHHHHHHHHHHHHHcCCEEcHHHHHHHHHHHHHHHH--cCCCCeEEEEEc
Confidence 66654332 1111 2345678999999999999986 789999999999999999988765 457889999999
Q ss_pred CCCCCchHHHH
Q 009781 473 AHGLKFTQSKI 483 (526)
Q Consensus 473 G~g~K~~~~~~ 483 (526)
|+|.||.+.++
T Consensus 398 d~g~ky~~~~~ 408 (435)
T 1jbq_A 398 DSVRNYMTKFL 408 (435)
T ss_dssp BBGGGGTTTTT
T ss_pred CCcccccchhh
Confidence 99999988744
No 33
>1tzj_A ACC deaminase, 1-aminocyclopropane-1-carboxylate deaminase; substrate, PLP, crystal, complex, hydrolase; HET: PLP; 1.99A {Pseudomonas SP} SCOP: c.79.1.1 PDB: 1rqx_A* 1tz2_A* 1tyz_A* 1tzk_A* 1tzm_A*
Probab=100.00 E-value=3.1e-46 Score=386.31 Aligned_cols=296 Identities=15% Similarity=0.099 Sum_probs=236.9
Q ss_pred hcccccCCCceeccccccccc-CCCcEEEEecCCC-C--CCchhhhhHHHHHHHHHHHHhcCCCceEEEE--eccchHHH
Q 009781 164 VSAFEGNSNLFWAERFGKEFL-QMNDLWVKHCGIS-H--TGSFKDLGMTVLVSQVNRLKRMNKPVIGVGC--ASTGDTSA 237 (526)
Q Consensus 164 vsl~eG~TPL~~~~~l~~~~l-g~~~l~lK~E~~n-P--TGSFKDRga~~~v~~a~~~~~~g~~~~~Vv~--aSSGN~g~ 237 (526)
+++..++|||++++++++. + |+.+||+|+|++| | |||||||++.+++..+.+ .| ..+|++ +|+||||.
T Consensus 9 i~~~~~~TPL~~~~~l~~~-~~g~~~i~~K~E~~n~p~~~gs~K~R~a~~~l~~a~~---~g--~~~vv~~GassGN~g~ 82 (338)
T 1tzj_A 9 YPLTFGPTPIQPLARLSKH-LGGKVHLYAKREDCNSGLAFGGNKTRKLEYLIPEALA---QG--CDTLVSIGGIQSNQTR 82 (338)
T ss_dssp CCCSSSSCCEEECHHHHHH-TTSSSEEEEEEGGGSCSSTTCCHHHHHHHTTHHHHHH---TT--CCEEEEEEETTCHHHH
T ss_pred cccCCCCCccEEHHHHHHh-hCCCceEEEEeCCCCCCCCCCchHHHHHHHHHHHHHH---cC--CCEEEEcCCchhHHHH
Confidence 5788999999999988776 6 5358999999997 8 999999999999988753 34 357887 89999999
Q ss_pred HHHHHHHhcCCCEEEEcCCCcCCHH--------hHHhHHhCCCEEEEECCCHHHH-----HHHHHHHHhcCC-eeec-c-
Q 009781 238 ALSAYCASAGVPSIVFLPANKISIA--------QLVQPIANGAFVLSLDTDFDGC-----MQLIREVTSELP-IYLA-N- 301 (526)
Q Consensus 238 AlAa~aa~~Gi~~~V~vP~~~~s~~--------k~~q~~~~GA~Vi~v~g~~dd~-----~~~~~~~~~~~~-~~~~-n- 301 (526)
|+|++|+++|++|+||||.+ .+.. |+.+++.+||+|+.++++++++ .+.+++++++.+ .|+. +
T Consensus 83 alA~~a~~~G~~~~iv~p~~-~~~~~~~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~p~~ 161 (338)
T 1tzj_A 83 QVAAVAAHLGMKCVLVQENW-VNYSDAVYDRVGNIQMSRILGADVRLVPDGFDIGFRRSWEDALESVRAAGGKPYAIPAG 161 (338)
T ss_dssp HHHHHHHHHTCEEEEEEECC-SSCCCTTTTTSHHHHHHHHTTCEEEECCC-------CHHHHHHHHHHHTTCCEEECCGG
T ss_pred HHHHHHHHhCCceEEEecCC-CCccccccccCccHHHHHhCCCEEEEeCCcchhhHHHHHHHHHHHHHhcCCceEEeCCC
Confidence 99999999999999999997 4544 8999999999999999988765 777888877764 3543 3
Q ss_pred -CCchhHHhHHHHHHHHHHHHcC--CCCCcEEEEeCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCchHHHHHH
Q 009781 302 -SLNSLRLEGQKTAAIEILQQFD--WEVPDWVIVPGGNLGNIYAFYKGFQMCKELGLVDRIPRLVCAQAANANPLYLYYK 378 (526)
Q Consensus 302 -s~Np~~i~G~~T~a~EI~eQl~--~~~pd~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prvi~Vq~~~~~~l~~a~~ 378 (526)
..||..++||+|+++||++|++ +..||+||+|+|+||+++|++++|++ +|. +. |||+||+++++++.+...
T Consensus 162 ~~~n~~~~~g~~t~~~Ei~~q~~~~~~~~d~vv~~vG~GGt~~Gi~~~~k~---~g~--~~-~vigve~~~~~~~~~~~~ 235 (338)
T 1tzj_A 162 CSDHPLGGLGFVGFAEEVRAQEAELGFKFDYVVVCSVTGSTQAGMVVGFAA---DGR--AD-RVIGVDASAKPAQTREQI 235 (338)
T ss_dssp GTSSTTTTTHHHHHHHHHHHHHHHHTSCCSEEEEEESSSHHHHHHHHHHHT---TTC--GG-GEEEEECSSCHHHHHHHH
T ss_pred cCCCcccHHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcHHHHHHHHHHHh---hCC--CC-eEEEEEccCchHHHHHHH
Confidence 4689999999999999999995 13699999999999999999998874 353 66 999999999877764321
Q ss_pred hCCccccccCCccccccccccCCCccHHHHHHHHHhCCCeEEEeCHHHHHHHHHHH-HhcCCeecch-HHHHHHHHHHHH
Q 009781 379 SGWKDFKPVRANTTFASAIQIGDPVSIDRAVYALKNCDGIVEEATEEELMDVSAQA-DSTGMFVCPH-TGVALSALIKLR 456 (526)
Q Consensus 379 ~G~~~~~~~~~~~Tia~~i~i~~P~~~~~~l~~l~~~~g~~v~Vsd~ei~~A~~~l-~~~Gi~veP~-sA~alAal~~l~ 456 (526)
. ...+|++++++++.|.. +..+..++++.+.++.|+|+|++++++++ +++|+++||+ +|++++|++++.
T Consensus 236 ~--------~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~ep~ysa~alaa~~~~~ 306 (338)
T 1tzj_A 236 T--------RIARQTAEKVGLERDIM-RADVVLDERFAGPEYGLPNEGTLEAIRLCARTEGMLTDPVYEGKSMHGMIEMV 306 (338)
T ss_dssp H--------HHHHHHHHHHTCSSCCC-GGGCEEECTTSCSBTTBCCHHHHHHHHHHHHHHSCCCCTTTHHHHHHHHHHHH
T ss_pred H--------HHHHHHHHHcCCCCCCC-cccEEEecCcccceeecCCHHHHHHHHHHHHhcCCccccchHHHHHHHHHHHH
Confidence 1 01246677776655321 12233446667778999999999999986 7799999996 999999999998
Q ss_pred HcCCCCCCCeEEEEECCCCCCchHHH
Q 009781 457 CKGVIGKTDKTVVVSTAHGLKFTQSK 482 (526)
Q Consensus 457 ~~g~i~~~~~vVvv~TG~g~K~~~~~ 482 (526)
+++.+.++++||+|+|| |.++....
T Consensus 307 ~~~~~~~~~~Vv~i~tG-G~~~~~~~ 331 (338)
T 1tzj_A 307 RNGEFPEGSRVLYAHLG-GVPALNGY 331 (338)
T ss_dssp HTTCSCTTCEEEEEECC-CGGGGGGG
T ss_pred HcCCCCCCCeEEEEECC-Ccccccch
Confidence 88777788999999999 56666553
No 34
>1wkv_A Cysteine synthase; homodimer, open alpha/beta folding, transferase; HET: PLP; 2.00A {Aeropyrum pernix} SCOP: c.79.1.1
Probab=100.00 E-value=4.4e-45 Score=384.23 Aligned_cols=288 Identities=20% Similarity=0.159 Sum_probs=235.7
Q ss_pred cchhcccc--cCCCceecccccccccCCCcEEEEecCCCC-CCchhhhhHHHHHHHHHHHHhcCCCceEEEEeccchHHH
Q 009781 161 DDIVSAFE--GNSNLFWAERFGKEFLQMNDLWVKHCGISH-TGSFKDLGMTVLVSQVNRLKRMNKPVIGVGCASTGDTSA 237 (526)
Q Consensus 161 ~~~vsl~e--G~TPL~~~~~l~~~~lg~~~l~lK~E~~nP-TGSFKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSGN~g~ 237 (526)
+++.++.. ..|||++++++++. | .+||+|+|++|| |||||||++.+++..+....+.| .+|+++|+||||.
T Consensus 85 ~~~~~~~g~~~~TPL~~l~~Ls~~--g-~~IylK~E~lnp~tGS~K~R~a~~~i~~l~~a~~~g---~~Iv~assGNhG~ 158 (389)
T 1wkv_A 85 PSPLDFFERGKPTPLVRSRLQLPN--G-VRVWLKLEWYNPFSLSVKDRPAVEIISRLSRRVEKG---SLVADATSSNFGV 158 (389)
T ss_dssp SSHHHHHHHSCSCCEEECCCCCST--T-EEEEEEEGGGSTTTSBTTHHHHHHHHHHHTTTSCTT---CEEEEECCHHHHH
T ss_pred HHHHHHhCCCCCCCeEEccccccC--C-CeEEEEEcCCCCCcCChHHHHHHHHHHHHHHHHhcC---CEEEEECCcHHHH
Confidence 45666666 46999999988753 4 389999999999 99999999999988754111222 6899999999999
Q ss_pred HHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEE-EEC-CCHHHHHHHHHHHHhcCCeeeccCC-chh-HHhHHHH
Q 009781 238 ALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVL-SLD-TDFDGCMQLIREVTSELPIYLANSL-NSL-RLEGQKT 313 (526)
Q Consensus 238 AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi-~v~-g~~dd~~~~~~~~~~~~~~~~~ns~-Np~-~i~G~~T 313 (526)
|+|++|+++|++|+||||++ ++..|+.+|+.+||+|+ .++ ++++++++.+++++++.+++++|++ ||. .+.||+|
T Consensus 159 AlA~aaa~~Gl~~~ivmp~~-~~~~k~~~~~~~GAeVv~~v~~~~~~da~~~a~~~~~~~g~~~~~p~~N~~~~~~~~~t 237 (389)
T 1wkv_A 159 ALSAVARLYGYRARVYLPGA-AEEFGKLLPRLLGAQVIVDPEAPSTVHLLPRVMKDSKNEGFVHVNQFYNDANFEAHMRG 237 (389)
T ss_dssp HHHHHHHHTTCEEEEEEETT-SCHHHHHHHHHTTCEEEEETTCSSSGGGHHHHHHHHHHHCCEECCTTTCHHHHHHHHHT
T ss_pred HHHHHHHHcCCeEEEEECCC-CCHHHHHHHHHcCCEEEEEcCCCCHHHHHHHHHHHHHccCcEecCcCCChHHHHHHHHH
Confidence 99999999999999999997 78889999999999999 888 8899999999998887788889997 686 5778999
Q ss_pred HHHHHHHHcC--CCCCcEEEEeCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCchHHHHHHhCCccccccCCcc
Q 009781 314 AAIEILQQFD--WEVPDWVIVPGGNLGNIYAFYKGFQMCKELGLVDRIPRLVCAQAANANPLYLYYKSGWKDFKPVRANT 391 (526)
Q Consensus 314 ~a~EI~eQl~--~~~pd~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prvi~Vq~~~~~~l~~a~~~G~~~~~~~~~~~ 391 (526)
+++||++|+. +..||+||+|+|+||+++|++++|+++ + +.+|||+||+.+++++. |. .
T Consensus 238 ~g~Ei~~Q~~~~g~~~D~vv~~vG~GG~~~Gi~~~~k~~---~---p~vrvigVe~~~~~~l~-----Gi---------~ 297 (389)
T 1wkv_A 238 TAREIFVQSRRGGLALRGVAGSLGTSGHMSAAAFYLQSV---D---PSIRAVLVQPAQGDSIP-----GI---------R 297 (389)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCSSSHHHHHHHHHHHHH---C---TTCEEEEEEECTTCCCT-----TC---------C
T ss_pred HHHHHHHHHHhcCCCCCEEEEeCCchHhHHHHHHHHHHh---C---CCCeEEEEecCCCCccc-----cc---------c
Confidence 9999999985 346999999999999999999998854 2 66899999999865441 21 1
Q ss_pred ccccccccCCCccHHHHHHHHHhCCCeEEEeCHHHHHHHHHHH-HhcCCeecchHHHHHHHHHHHHHcCCCCCCCeEEEE
Q 009781 392 TFASAIQIGDPVSIDRAVYALKNCDGIVEEATEEELMDVSAQA-DSTGMFVCPHTGVALSALIKLRCKGVIGKTDKTVVV 470 (526)
Q Consensus 392 Tia~~i~i~~P~~~~~~l~~l~~~~g~~v~Vsd~ei~~A~~~l-~~~Gi~veP~sA~alAal~~l~~~g~i~~~~~vVvv 470 (526)
++.. .|. + +. ....++.++.|+|+|++++++++ +++|++++|+||+++|+++++.+++.+.++ .+|++
T Consensus 298 ~i~~-----~~~-~---~~-~~~~dg~~~~Vsd~ea~~a~~~l~~~eGi~~~pssa~alaa~~~l~~~g~~~~~-~vVvi 366 (389)
T 1wkv_A 298 RVET-----GML-W---IN-MLDISYTLAEVTLEEAMEAVVEVARSDGLVIGPSGGAAVKALAKKAAEGDLEPG-DYVVV 366 (389)
T ss_dssp CGGG-----CCS-H---HH-HSCCCCEEEEECHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHHHHHHTTCSCSE-EEEEE
T ss_pred ccCC-----cch-h---hh-hheeccEEEEECHHHHHHHHHHHHHHcCCeEChHHHHHHHHHHHHHHhcCCCCC-CEEEE
Confidence 1111 122 2 11 12233488999999999999986 779999999999999999999988766554 58889
Q ss_pred ECCCCCCchHHHHhhh
Q 009781 471 STAHGLKFTQSKIDYH 486 (526)
Q Consensus 471 ~TG~g~K~~~~~~~~~ 486 (526)
+||+|.||++.+.++.
T Consensus 367 ltg~G~k~~~~~~~~~ 382 (389)
T 1wkv_A 367 VPDTGFKYLSLVQNAL 382 (389)
T ss_dssp ECBBGGGCHHHHHHHH
T ss_pred EcCCCccCHHHHHHHH
Confidence 9999999999876544
No 35
>1x1q_A Tryptophan synthase beta chain; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.50A {Thermus thermophilus}
Probab=100.00 E-value=9.6e-45 Score=385.75 Aligned_cols=304 Identities=15% Similarity=0.166 Sum_probs=232.0
Q ss_pred cCCCceecccccccccCCCcEEEEecCCCCCCchhhhhHHHHHHHHHHHHhcCCCceEEEEeccchHHHHHHHHHHhcCC
Q 009781 169 GNSNLFWAERFGKEFLQMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLKRMNKPVIGVGCASTGDTSAALSAYCASAGV 248 (526)
Q Consensus 169 G~TPL~~~~~l~~~~lg~~~l~lK~E~~nPTGSFKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSGN~g~AlAa~aa~~Gi 248 (526)
..|||++++++++. +|..+||+|+|++|||||||||++.+++..+.+ .|++ ..|+++||||||.|+|++|+++|+
T Consensus 76 ~~TPL~~~~~Ls~~-~gg~~i~lK~E~l~ptGSfK~R~a~~~i~~a~~---~g~~-~vI~~~ssGNhg~avA~aaa~~Gi 150 (418)
T 1x1q_A 76 RPTPLYHAKRLSEY-WGGAQVFLKREDLLHTGAHKINNTLGQALLARR---MGKR-RVIAETGAGQHGVSVATVAALFGL 150 (418)
T ss_dssp CSCCEEECHHHHHH-HTSSEEEEEEGGGSGGGBTTHHHHHHHHHHHHH---HTCC-EEEEECSSSHHHHHHHHHHHHHTC
T ss_pred CCCCcEEhHHhHhh-cCCceEEEEEccCCcCccHHHHHHHHHHHHHHH---cCCC-EEEEecCchHHHHHHHHHHHHcCC
Confidence 35999999998876 654589999999999999999999988876543 3432 455679999999999999999999
Q ss_pred CEEEEcCCCcC--CHHhHHhHHhCCCEEEEEC---CCHHHHHHHHHH-HHhcC-C-eeeccCC---chh--HH-hHHHHH
Q 009781 249 PSIVFLPANKI--SIAQLVQPIANGAFVLSLD---TDFDGCMQLIRE-VTSEL-P-IYLANSL---NSL--RL-EGQKTA 314 (526)
Q Consensus 249 ~~~V~vP~~~~--s~~k~~q~~~~GA~Vi~v~---g~~dd~~~~~~~-~~~~~-~-~~~~ns~---Np~--~i-~G~~T~ 314 (526)
+|+||||++.+ ...|+.+|+.+||+|+.++ ++++++.+.+.+ ++++. + +|..++. +|+ .+ +||+|+
T Consensus 151 ~~~I~mp~~~~~~~~~kv~~~~~~GA~Vv~v~~~~~~~~~a~~~a~~~~~~~~~~~~~i~~~~~n~~p~~~~v~~gq~t~ 230 (418)
T 1x1q_A 151 ECVVYMGEEDVRRQALNVFRMKLLGAEVRPVAAGSRTLKDATNEAIRDWITNVRTTFYILGSVVGPHPYPMMVRDFQSVI 230 (418)
T ss_dssp EEEEEEEHHHHHTCHHHHHHHHHTTCEEEEECSTTSSHHHHHHHHHHHHHHTTTTEEECCCCSSSSTTHHHHHHHHHTHH
T ss_pred CEEEEECCCcchhhhHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHhCCCcEEEeCCccCCCCcHHHHHHHHHHH
Confidence 99999998522 1256778999999999998 389999887754 45553 3 4444443 343 33 599999
Q ss_pred HHHHHHHcC---CCCCcEEEEeCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCC----chHHHHHHhCCccccc-
Q 009781 315 AIEILQQFD---WEVPDWVIVPGGNLGNIYAFYKGFQMCKELGLVDRIPRLVCAQAANA----NPLYLYYKSGWKDFKP- 386 (526)
Q Consensus 315 a~EI~eQl~---~~~pd~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prvi~Vq~~~~----~~l~~a~~~G~~~~~~- 386 (526)
++||++|+. +..||+||+|+|+||+++|++.+|++ ++ +|.+|||+||++++ +.+..++..|......
T Consensus 231 ~~Ei~~Ql~~~~~~~~D~vvvpvGgGG~~~Gi~~~~k~---l~--~p~~~vigVe~~g~~~~~~~~~~~l~~G~~~~~~g 305 (418)
T 1x1q_A 231 GEEVKRQSLELFGRLPDALIAAVGGGSNAIGLFAPFAY---LP--EGRPKLIGVEAAGEGLSTGRHAASIGAGKRGVLHG 305 (418)
T ss_dssp HHHHHHHHHHHHSSCCSEEEEECSSSSHHHHHHHHHHT---SC--TTCCEEEEEEECCTTSSSCHHHHHHHHTCEEEETT
T ss_pred HHHHHHHHHhhcCCCCCEEEEecCCcHhHHHHHHHHHH---hC--CCCCeEEEEecCCcccccHHHHHHHHcCCeeeecc
Confidence 999999984 34599999999999999999998874 22 37789999999996 3577888888532111
Q ss_pred ------------cCCccccccccccCCCccHHHHHHHHHhCCCeEEEeCHHHHHHHHHHH-HhcCCeecchHHHHHHHHH
Q 009781 387 ------------VRANTTFASAIQIGDPVSIDRAVYALKNCDGIVEEATEEELMDVSAQA-DSTGMFVCPHTGVALSALI 453 (526)
Q Consensus 387 ------------~~~~~Tia~~i~i~~P~~~~~~l~~l~~~~g~~v~Vsd~ei~~A~~~l-~~~Gi~veP~sA~alAal~ 453 (526)
....+|++++|+++.+.+. .....+...+.++.|+|+|++++++++ +++|++++|++|++++++.
T Consensus 306 ~~~~~~~~~~g~~~~~~tia~gl~~~~~g~~--~~~l~~~~~~~~~~Vsd~e~~~a~~~l~~~egi~~~~~sa~a~a~a~ 383 (418)
T 1x1q_A 306 SYMYLLYDHDGQITPAHSVSAGLDYPGVGPE--HSYYADAGVAEYASVTDEEALEGFKLLARLEGIIPALESAHAIAYAA 383 (418)
T ss_dssp EEEEBCCC----------------CSBCCHH--HHHHHHHTSEEEEEECHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHH
T ss_pred ccccccccccccccCCceeeeccCCCCCCHH--HHHHHhccCeEEEEECHHHHHHHHHHHHHhcCCcccchHHHHHHHHH
Confidence 1235799999987766654 344445556788999999999999986 7899999999999999998
Q ss_pred HHHHcCCCCCCCeEEEEECCCCCCchHHHHhhh
Q 009781 454 KLRCKGVIGKTDKTVVVSTAHGLKFTQSKIDYH 486 (526)
Q Consensus 454 ~l~~~g~i~~~~~vVvv~TG~g~K~~~~~~~~~ 486 (526)
++.++ +.++++||+++||+|.||++.+.++.
T Consensus 384 ~~~~~--~~~~~~Vv~vlsG~g~kd~~~~~~~~ 414 (418)
T 1x1q_A 384 KVVPE--MDKDQVVVINLSGRGDKDVTEVMRLL 414 (418)
T ss_dssp HHTTT--SCTTCEEEEEECBBGGGTHHHHHHTC
T ss_pred HHHHh--cCCCCeEEEEECCCCCCCHHHHHHHh
Confidence 87654 45788999999999999999876554
No 36
>4d9b_A D-cysteine desulfhydrase; fold type II PLP-dependent enzyme or tryptophan synthase BET like family, PLP dependent enzyme, lyase; HET: PMP; 1.67A {Salmonella typhimurium} PDB: 4d96_A* 4d9c_A* 4d9e_A* 4d9f_A* 4d97_A* 4d8w_A* 4d8u_A* 4d8t_A* 4d92_A* 4d99_A*
Probab=100.00 E-value=2.2e-45 Score=380.92 Aligned_cols=288 Identities=15% Similarity=0.111 Sum_probs=234.7
Q ss_pred chhcccccCCCceecccccccccCCCcEEEEecCCCC--CCchhhhhHHHHHHHHHHHHhcCCCceEEEEec--cchHHH
Q 009781 162 DIVSAFEGNSNLFWAERFGKEFLQMNDLWVKHCGISH--TGSFKDLGMTVLVSQVNRLKRMNKPVIGVGCAS--TGDTSA 237 (526)
Q Consensus 162 ~~vsl~eG~TPL~~~~~l~~~~lg~~~l~lK~E~~nP--TGSFKDRga~~~v~~a~~~~~~g~~~~~Vv~aS--SGN~g~ 237 (526)
+.+++..++|||++++++.+. +|. +||+|+|++|| |||||||++.+++..+.+ .| .++||++| +||||.
T Consensus 24 ~ri~~~~~~TPL~~~~~l~~~-~g~-~v~~K~E~l~p~~~gs~K~R~~~~~l~~a~~---~G--~~~vv~~s~tsGN~g~ 96 (342)
T 4d9b_A 24 PRLEFIGAPTPLEYLPRLSDY-LGR-EIYIKRDDVTPIAMGGNKLRKLEFLVADALR---EG--ADTLITAGAIQSNHVR 96 (342)
T ss_dssp CCCCSSCSCCCEEECHHHHHH-HTS-CEEEEEGGGCSSTTCCTHHHHHHHHHHHHHH---TT--CCEEEEEEETTCHHHH
T ss_pred CcccccCCCCceeEhhhhHHh-hCC-EEEEEeCCCCCCCCcchHHHhHHHHHHHHHH---cC--CCEEEEcCCcccHHHH
Confidence 346788999999999988776 675 89999999999 999999999999987643 34 36788885 799999
Q ss_pred HHHHHHHhcCCCEEEEcCCCcCCH--------HhHHhHHhCCCEEEEECCC--HHHHH-HHHHHHHhcCC-eeec--cCC
Q 009781 238 ALSAYCASAGVPSIVFLPANKISI--------AQLVQPIANGAFVLSLDTD--FDGCM-QLIREVTSELP-IYLA--NSL 303 (526)
Q Consensus 238 AlAa~aa~~Gi~~~V~vP~~~~s~--------~k~~q~~~~GA~Vi~v~g~--~dd~~-~~~~~~~~~~~-~~~~--ns~ 303 (526)
|+|++|+++|++|+||||.+ .+. .|+.+++.+||+|+.++++ ++++. +.++++.++.+ .|+. +..
T Consensus 97 alA~aa~~~G~~~~iv~p~~-~~~~~~~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~p~~~~ 175 (342)
T 4d9b_A 97 QTAAVAAKLGLHCVALLENP-IGTTAENYLTNGNRLLLDLFNTQIEMCDALTDPDAQLQTLATRIEAQGFRPYVIPVGGS 175 (342)
T ss_dssp HHHHHHHHHTCEEEEEEECT-TCCCCHHHHHSHHHHHHHHTTCEEEECSCCSSHHHHHHHHHHHHHHTTCCEEECCGGGC
T ss_pred HHHHHHHHhCCcEEEEEeCC-CCCccccccccchHHHHHHCCCEEEEECchhhHHHHHHHHHHHHHhcCCceEEeCCCCC
Confidence 99999999999999999986 442 4888999999999999874 45555 45666666654 3332 235
Q ss_pred chhHHhHHHHHHHHHHHHcCC-CCCcEEEEeCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCchHHHHHHhCCc
Q 009781 304 NSLRLEGQKTAAIEILQQFDW-EVPDWVIVPGGNLGNIYAFYKGFQMCKELGLVDRIPRLVCAQAANANPLYLYYKSGWK 382 (526)
Q Consensus 304 Np~~i~G~~T~a~EI~eQl~~-~~pd~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prvi~Vq~~~~~~l~~a~~~G~~ 382 (526)
||..++||+|+++||++|+++ ..||+||+|+|+||+++|++++|+++ + +.+|||+||+++++++.+....
T Consensus 176 n~~~~~G~~t~~~EI~~q~~~~~~~d~vv~~vGtGGt~aGi~~~~k~~---~---~~~~vigVe~~~~~~~~~~~~~--- 246 (342)
T 4d9b_A 176 SALGAMGYVESALEIAQQCEEVVGLSSVVVASGSAGTHAGLAVGLEHL---M---PDVELIGVTVSRSVAEQKPKVI--- 246 (342)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTTCCCCEEEEEESSSHHHHHHHHHHHHH---C---TTSEEEEEESSSCHHHHHHHHH---
T ss_pred ChHHHHHHHHHHHHHHHHHhccCCCCEEEEeCCCCHHHHHHHHHHHhh---C---CCCeEEEEEecCcHHHHHHHHH---
Confidence 899999999999999999974 36999999999999999999998864 2 6689999999998877654321
Q ss_pred cccccCCccccccccccCCCccHHHHHHHHHhCCCeEEEeCHHHHHHHHHHH-HhcCCeecch-HHHHHHHHHHHHHcCC
Q 009781 383 DFKPVRANTTFASAIQIGDPVSIDRAVYALKNCDGIVEEATEEELMDVSAQA-DSTGMFVCPH-TGVALSALIKLRCKGV 460 (526)
Q Consensus 383 ~~~~~~~~~Tia~~i~i~~P~~~~~~l~~l~~~~g~~v~Vsd~ei~~A~~~l-~~~Gi~veP~-sA~alAal~~l~~~g~ 460 (526)
...+|++++|.++.+.. +.++++..+.++.|+|+|++++++++ +++|+++||+ +|+++||+.++.+++.
T Consensus 247 -----~~~~t~a~gl~~~~~~~----~~~~~~~~d~~~~V~d~e~~~a~~~l~~~~gi~~epsYsa~a~aa~~~~~~~~~ 317 (342)
T 4d9b_A 247 -----ALQQAIAGQLALTATAD----IHLWDDYFAPGYGVPNDAGMEAVKLLASLEGVLLDPVYTGKAMAGLIDGISQKR 317 (342)
T ss_dssp -----HHHHHHHHHTTCCCCCC----CEEECTTSTTCTTCCCHHHHHHHHHHHHHHSCCCCTTTHHHHHHHHHHHHHHTC
T ss_pred -----HHHHHHHHHcCCCCccc----eEEEecCCCceEecCCHHHHHHHHHHHHhcCccccccHHHHHHHHHHHHHHcCC
Confidence 11357778877631111 22335667788999999999999986 7799999998 9999999999998887
Q ss_pred CCCCCeEEEEECCCC
Q 009781 461 IGKTDKTVVVSTAHG 475 (526)
Q Consensus 461 i~~~~~vVvv~TG~g 475 (526)
+.++++||+|+||+.
T Consensus 318 ~~~~~~Vv~i~tGGn 332 (342)
T 4d9b_A 318 FNDDGPILFIHTGGA 332 (342)
T ss_dssp SSSSSCEEEEECCCT
T ss_pred CCCCCeEEEEECCCc
Confidence 888999999999964
No 37
>1v8z_A Tryptophan synthase beta chain 1; beta+alpha, riken structural genomics/proteomics initiative, structural genomics, lyase; HET: PLP; 2.21A {Pyrococcus furiosus} SCOP: c.79.1.1 PDB: 1wdw_B*
Probab=100.00 E-value=1.8e-44 Score=379.94 Aligned_cols=301 Identities=15% Similarity=0.172 Sum_probs=235.6
Q ss_pred CCCceecccccccccCCCcEEEEecCCCCCCchhhhhHHHHHHHHHHHHhcCCCceEEEEeccchHHHHHHHHHHhcCCC
Q 009781 170 NSNLFWAERFGKEFLQMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLKRMNKPVIGVGCASTGDTSAALSAYCASAGVP 249 (526)
Q Consensus 170 ~TPL~~~~~l~~~~lg~~~l~lK~E~~nPTGSFKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSGN~g~AlAa~aa~~Gi~ 249 (526)
.|||++++++++. +|..+||+|+|++|||||||||++.+++..++ +.|.+ ..|+++||||||.|+|++|+++|++
T Consensus 50 ~TPL~~~~~l~~~-~g~~~i~~K~E~~~ptGSfK~R~a~~~i~~a~---~~g~~-~vv~~~ssGN~g~a~A~aa~~~G~~ 124 (388)
T 1v8z_A 50 PTPLYYAKRLTEK-IGGAKIYLKREDLVHGGAHKTNNAIGQALLAK---FMGKT-RLIAETGAGQHGVATAMAGALLGMK 124 (388)
T ss_dssp SCCEEECHHHHHH-HTSSEEEEEEGGGSTTSBTHHHHHHHHHHHHH---HTTCC-EEEEEESSSHHHHHHHHHHHHTTCE
T ss_pred CCCceehHhhHhh-cCCceEEEEeccCCCCCCHHHHHHHHHHHHHH---HcCCC-EEEEecCchHHHHHHHHHHHHcCCc
Confidence 4999999988876 66458999999999999999999999888654 33432 3344589999999999999999999
Q ss_pred EEEEcCCCcCC--HHhHHhHHhCCCEEEEECC---CHHHHHHHHHH-HHhcC-C-eeeccCC---chh--HH-hHHHHHH
Q 009781 250 SIVFLPANKIS--IAQLVQPIANGAFVLSLDT---DFDGCMQLIRE-VTSEL-P-IYLANSL---NSL--RL-EGQKTAA 315 (526)
Q Consensus 250 ~~V~vP~~~~s--~~k~~q~~~~GA~Vi~v~g---~~dd~~~~~~~-~~~~~-~-~~~~ns~---Np~--~i-~G~~T~a 315 (526)
|+||||++..+ ..++.+++.+||+|+.+++ +++++.+.+++ ++++. + +|..+++ +|+ .+ .||+|++
T Consensus 125 ~~iv~p~~~~~~~~~~~~~~~~~GA~V~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~n~~p~~~~~~~~~~t~~ 204 (388)
T 1v8z_A 125 VDIYMGAEDVERQKMNVFRMKLLGANVIPVNSGSRTLKDAINEALRDWVATFEYTHYLIGSVVGPHPYPTIVRDFQSVIG 204 (388)
T ss_dssp EEEEEEHHHHTTCHHHHHHHHHTTCEEEEECSTTSSHHHHHHHHHHHHHHHTTTEEECCCSSCSSTTHHHHHHHHHHHHH
T ss_pred EEEEEcCCchhhhhhHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHhCCCceEecCCccCCCCchhHHHHHhHHHH
Confidence 99999985233 2457889999999999986 89999888754 45553 4 4544443 333 23 4899999
Q ss_pred HHHHHHcC---CCCCcEEEEeCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCch----HHHHHHhCCcccc---
Q 009781 316 IEILQQFD---WEVPDWVIVPGGNLGNIYAFYKGFQMCKELGLVDRIPRLVCAQAANANP----LYLYYKSGWKDFK--- 385 (526)
Q Consensus 316 ~EI~eQl~---~~~pd~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prvi~Vq~~~~~~----l~~a~~~G~~~~~--- 385 (526)
+||++|+. +..||+||+|+|+||+++|++.+|++ +|.+|||+||++++.. +.+++..|.....
T Consensus 205 ~Ei~~q~~~~~~~~~d~vvvpvG~GG~~aGi~~~~~~-------~~~~~vigve~~~~~~~~~~~~~~l~~g~~~~~~~~ 277 (388)
T 1v8z_A 205 REAKAQILEAEGQLPDVIVACVGGGSNAMGIFYPFVN-------DKKVKLVGVEAGGKGLESGKHSASLNAGQVGVFHGM 277 (388)
T ss_dssp HHHHHHHHHHHSSCCSEEEEECSSSHHHHHHHGGGTT-------CTTSEEEEEEEEETBGGGTBSCCHHHHCEEEEETTE
T ss_pred HHHHHHHHHhcCCCCCEEEEecCccHhHHHHHHHHhh-------CCCceEEEEccCccccchhhhhHHHhcCCceecccc
Confidence 99999993 34699999999999999999987751 2778999999998532 3456777742210
Q ss_pred ----------ccCCccccccccccCCCccHHHHHHHHHhCCCeEEEeCHHHHHHHHHHH-HhcCCeecchHHHHHHHHHH
Q 009781 386 ----------PVRANTTFASAIQIGDPVSIDRAVYALKNCDGIVEEATEEELMDVSAQA-DSTGMFVCPHTGVALSALIK 454 (526)
Q Consensus 386 ----------~~~~~~Tia~~i~i~~P~~~~~~l~~l~~~~g~~v~Vsd~ei~~A~~~l-~~~Gi~veP~sA~alAal~~ 454 (526)
......|++++|++..+... .....+...+.++.|+|+|++++++++ +++|++++|++|++++++.+
T Consensus 278 ~~~~~~~~~~~~~~~~tia~gl~~~~~g~~--~~~~~~~~~~~~~~V~d~e~~~a~~~l~~~egi~~~~~sa~a~a~a~~ 355 (388)
T 1v8z_A 278 LSYFLQDEEGQIKPTHSIAPGLDYPGVGPE--HAYLKKIQRAEYVTVTDEEALKAFHELSRTEGIIPALESAHAVAYAMK 355 (388)
T ss_dssp EEEECBCTTSCBCCCCCSSTTSCCSBCCHH--HHHHHHTTSEEEEEEEHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHHH
T ss_pred ccccccccccccCCCceeeeccccCCCChh--HHHHHhcCCcEEEEECHHHHHHHHHHHHHhcCCeecccHHHHHHHHHH
Confidence 11235799999987655543 344455666789999999999999986 77999999999999999998
Q ss_pred HHHcCCCCCCCeEEEEECCCCCCchHHHHhhh
Q 009781 455 LRCKGVIGKTDKTVVVSTAHGLKFTQSKIDYH 486 (526)
Q Consensus 455 l~~~g~i~~~~~vVvv~TG~g~K~~~~~~~~~ 486 (526)
+.++ +.++++||+++||+|.||++.+.++.
T Consensus 356 l~~~--~~~~~~vv~i~tg~g~k~~~~~~~~~ 385 (388)
T 1v8z_A 356 LAKE--MSRDEIIIVNLSGRGDKDLDIVLKVS 385 (388)
T ss_dssp HHHT--SCTTCEEEEEECBBSGGGHHHHHHHH
T ss_pred HHHh--cCCCCEEEEEECCCCccCHHHHHHHh
Confidence 8765 45788999999999999998876544
No 38
>1f2d_A 1-aminocyclopropane-1-carboxylate deaminase; carbon-carbon L open twisted alpha/beta, lyase; HET: PLP; 2.00A {Williopsis saturnus} SCOP: c.79.1.1 PDB: 1j0e_A* 1j0d_A* 1j0c_A*
Probab=100.00 E-value=3e-45 Score=379.70 Aligned_cols=290 Identities=13% Similarity=0.082 Sum_probs=234.5
Q ss_pred hcccccCCCceeccccccccc-CCCcEEEEecCCC-C--CCchhhhhHHHHHHHHHHHHhcCCCceEEEE--eccchHHH
Q 009781 164 VSAFEGNSNLFWAERFGKEFL-QMNDLWVKHCGIS-H--TGSFKDLGMTVLVSQVNRLKRMNKPVIGVGC--ASTGDTSA 237 (526)
Q Consensus 164 vsl~eG~TPL~~~~~l~~~~l-g~~~l~lK~E~~n-P--TGSFKDRga~~~v~~a~~~~~~g~~~~~Vv~--aSSGN~g~ 237 (526)
+++..++|||++++++++. + |+.+||+|+|++| | |||||||++.+++..+.+ .| ..+||+ +|+||||.
T Consensus 9 i~~~~~~TPL~~~~~l~~~-~~g~~~i~~K~E~~n~p~~~Gs~K~R~a~~~l~~a~~---~g--~~~vv~~G~ssGN~g~ 82 (341)
T 1f2d_A 9 YPLTFGPSPISNLNRLSQH-LGSKVNVYAKREDCNSGLAFGGNKLRKLEYIVPDIVE---GD--YTHLVSIGGRQSNQTR 82 (341)
T ss_dssp CCCSSSSCCEEECHHHHHH-TTTCSEEEEEEGGGSCSSTTCCHHHHHHTTTHHHHHH---SC--CSEEEEEEETTCHHHH
T ss_pred cccCCCCCcceeHHhHHHh-hCCCceEEEEeCCCCCCCCCCchHHHHHHHHHHHHHH---cC--CCEEEEcCCcchHHHH
Confidence 5678899999999988776 6 5358999999999 9 999999999999988753 34 368889 99999999
Q ss_pred HHHHHHHhcCCCEEEEcCCCcCC-----HH------hHHhHHhCCCEEEEECCCHH-----HHHHHHHHHHhcCC-ee-e
Q 009781 238 ALSAYCASAGVPSIVFLPANKIS-----IA------QLVQPIANGAFVLSLDTDFD-----GCMQLIREVTSELP-IY-L 299 (526)
Q Consensus 238 AlAa~aa~~Gi~~~V~vP~~~~s-----~~------k~~q~~~~GA~Vi~v~g~~d-----d~~~~~~~~~~~~~-~~-~ 299 (526)
|+|++|+++|++|+||||.+ .+ +. |+.+++.+||+|+.++++++ ++.+.+++++++.+ .| +
T Consensus 83 alA~~a~~~G~~~~iv~p~~-~~~~~~~~~~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~i 161 (341)
T 1f2d_A 83 MVAALAAKLGKKCVLIQEDW-VPIPEAEKDVYNRVGNIELSRIMGADVRVIEDGFDIGMRKSFANALQELEDAGHKPYPI 161 (341)
T ss_dssp HHHHHHHHHTCEEEEEEECC-SCCCGGGTTTTTTSHHHHHHHHTTCEEEECCCCCCSSCCHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHhCCceEEEeccC-CCccccccccccccccHHHHHhCCCEEEEeCCccchhHHHHHHHHHHHHHhcCCcEEEe
Confidence 99999999999999999997 45 33 88999999999999998654 67888888887764 34 4
Q ss_pred ccC--CchhHHhHHHHHHHHHHHHcC--CCCCcEEEEeCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCchHHH
Q 009781 300 ANS--LNSLRLEGQKTAAIEILQQFD--WEVPDWVIVPGGNLGNIYAFYKGFQMCKELGLVDRIPRLVCAQAANANPLYL 375 (526)
Q Consensus 300 ~ns--~Np~~i~G~~T~a~EI~eQl~--~~~pd~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prvi~Vq~~~~~~l~~ 375 (526)
.++ .||..++||+|+++||++|++ |..||+||+|+|+||+++|++++|+++ + +.+|||+||+.+++++.+
T Consensus 162 ~~~~~~np~~~~G~~t~~~Ei~~q~~~~~~~~d~vv~~vGtGgt~~Gi~~~~k~~---~---~~~~vigVe~~~~~~~~~ 235 (341)
T 1f2d_A 162 PAGCSEHKYGGLGFVGFADEVINQEVELGIKFDKIVVCCVTGSTTAGILAGMAQY---G---RQDDVIAIDASFTSEKTK 235 (341)
T ss_dssp CGGGTTSTTTTTHHHHHHHHHHHHHHHHTCCCSEEEEEESSSHHHHHHHHHHGGG---T---CGGGEEEEECSSCHHHHH
T ss_pred CCCcCCCCccHHHHHHHHHHHHHHHHhcCCCCCEEEEecCchHhHHHHHHHHHhc---C---CCceEEEEEecCchHHHH
Confidence 454 489999999999999999986 346999999999999999999998753 2 567999999999877764
Q ss_pred HHHhCCccccccCCccccccccccCCCccHHHHHHHHHhCCCeEEEeCHHHHHHHHHHH-HhcCCeecch-HHHHHHHHH
Q 009781 376 YYKSGWKDFKPVRANTTFASAIQIGDPVSIDRAVYALKNCDGIVEEATEEELMDVSAQA-DSTGMFVCPH-TGVALSALI 453 (526)
Q Consensus 376 a~~~G~~~~~~~~~~~Tia~~i~i~~P~~~~~~l~~l~~~~g~~v~Vsd~ei~~A~~~l-~~~Gi~veP~-sA~alAal~ 453 (526)
. + ... ...++++++..+... ..+.+.++..+.++.|+|+|++++++++ +++|+++||. +|+++||++
T Consensus 236 ~---~---~~~--~~~~~~~~ig~~~~~---~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~egi~~ep~~sa~alaa~~ 304 (341)
T 1f2d_A 236 E---Q---TLR--IANNTAKLIGVEHEF---KDFTLDTRFAYPCYGVPNEGTIEAIRTCAEQEGVLTDPVYEGKSMQGLI 304 (341)
T ss_dssp H---H---HHH--HHHHHHHHHTCCCCC---SCCCEECTTSTTBTTBCCHHHHHHHHHHHHHHSCCCCTTTHHHHHHHHH
T ss_pred H---H---HHH--HHHHHHHHcCCCCCc---CeEEEecCcccceEecCCHHHHHHHHHHHHHcCCccccchHHHHHHHHH
Confidence 3 1 100 113445555432200 0112335567778999999999999986 6799999995 999999999
Q ss_pred HHHHcCCCCCCCeEEEEECCCCCC
Q 009781 454 KLRCKGVIGKTDKTVVVSTAHGLK 477 (526)
Q Consensus 454 ~l~~~g~i~~~~~vVvv~TG~g~K 477 (526)
++.+++.+.++++||+++||++..
T Consensus 305 ~~~~~~~~~~~~~Vv~i~tGG~~~ 328 (341)
T 1f2d_A 305 ALIKEDYFKPGANVLYVHLGGAPA 328 (341)
T ss_dssp HHHHTTCSCTTCEEEEEECCCGGG
T ss_pred HHHHhCCCCCCCeEEEEECCchHH
Confidence 999888777899999999997543
No 39
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=100.00 E-value=2e-43 Score=386.11 Aligned_cols=295 Identities=17% Similarity=0.178 Sum_probs=237.4
Q ss_pred cccccCCCceecccccccccCC-CcEEEEecCCCCCCchhhhhHHHHHHHHHHHHhcCCCceEEEEeccchHHHHHHHHH
Q 009781 165 SAFEGNSNLFWAERFGKEFLQM-NDLWVKHCGISHTGSFKDLGMTVLVSQVNRLKRMNKPVIGVGCASTGDTSAALSAYC 243 (526)
Q Consensus 165 sl~eG~TPL~~~~~l~~~~lg~-~~l~lK~E~~nPTGSFKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSGN~g~AlAa~a 243 (526)
.-..|+|||++++++++. +|+ .+||+|+|++|||||||||++.+++..+.+.+.... ..+|+++||||||.|+|++|
T Consensus 55 ~~~ig~TPl~~l~~l~~~-~g~~~~i~~K~E~~~ptGS~K~R~a~~~i~~a~~~g~~~~-g~~vv~~ssGN~g~a~A~~a 132 (527)
T 3pc3_A 55 LEVIGCTPLVKLNNIPAS-DGIECEMYAKCEFLNPGGSVKDRIGYRMVQDAEEQGLLKP-GYTIIEPTSGNTGIGLAMAC 132 (527)
T ss_dssp GGGSSCCCEEECCSHHHH-TTCCSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHHTCCCT-TCEEEEECSSHHHHHHHHHH
T ss_pred HhhcCCCCcEEcchhhhh-cCCCcEEEEEeccCCCCCCHHHHHHHHHHHHHHHcCCCCC-CCEEEEeCCCHHHHHHHHHH
Confidence 345789999999998876 775 489999999999999999999999988765432222 26899999999999999999
Q ss_pred HhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECC--CHHH---HHHHHHHHHhcCC-eeeccCC-chh-HHhHHHHHH
Q 009781 244 ASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDT--DFDG---CMQLIREVTSELP-IYLANSL-NSL-RLEGQKTAA 315 (526)
Q Consensus 244 a~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g--~~dd---~~~~~~~~~~~~~-~~~~ns~-Np~-~i~G~~T~a 315 (526)
+++|++|+||||++ ++..|+.+++.+||+|+.+++ +|++ +.+.+++++++.+ .++.+++ ||. .+.||.|++
T Consensus 133 ~~~G~~~~iv~p~~-~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~n~~~g~~t~~ 211 (527)
T 3pc3_A 133 AVKGYKCIIVMPEK-MSNEKVSALRTLGAKIIRTPTEAAYDSPEGLIYVAQQLQRETPNSIVLDQYRNAGNPLAHYDGTA 211 (527)
T ss_dssp HHHTCEEEEEEETT-SCHHHHHHHHHTTCEEEEECTTSCTTSTTSHHHHHHHHHHHSSSEECCCTTTCTHHHHHHHHTHH
T ss_pred HHhCCeEEEEEcCC-CCHHHHHHHHHCCCEEEEeCCCCCcccHHHHHHHHHHHHHhCCCcEecCCCCCcchHHHHHHHHH
Confidence 99999999999996 799999999999999999986 5664 5667778877764 5666765 675 578999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCchHHHHHHhCCccccccCCcccccc
Q 009781 316 IEILQQFDWEVPDWVIVPGGNLGNIYAFYKGFQMCKELGLVDRIPRLVCAQAANANPLYLYYKSGWKDFKPVRANTTFAS 395 (526)
Q Consensus 316 ~EI~eQl~~~~pd~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prvi~Vq~~~~~~l~~a~~~G~~~~~~~~~~~Tia~ 395 (526)
+||++|+++ .||+||+|+|+||+++|++++|++. .|..|||+||++++. +......+. .....+.++
T Consensus 212 ~Ei~~q~~~-~~d~vv~~vG~GG~~~G~~~~~k~~------~p~~~vigve~~~~~-~~~~~~~~~-----~~~~~~~~~ 278 (527)
T 3pc3_A 212 AEILWQLDN-KVDMIVVSAGTAGTISGIGRKIKEQ------VPSCQIVGVDPYGSI-LARPAELNK-----TDVQFYEVE 278 (527)
T ss_dssp HHHHHHTTT-CCSEEEEECSSSHHHHHHHHHHHHH------CTTSEEEEEEETTCC-CSSSGGGGC-----CSCCCCSCC
T ss_pred HHHHHhcCC-CCCEEEEecCccHHHHHHHHHHHHh------CCCCEEEEEecCCcc-cccchhhcC-----CCCCceecc
Confidence 999999985 6999999999999999999998864 166799999999964 322211111 112234556
Q ss_pred ccccCC-CccHHHHHHHHHhCCCeEEEeCHHHHHHHHHHH-HhcCCeecchHHHHHHHHHHHHHcCCCCCCCeEEEEECC
Q 009781 396 AIQIGD-PVSIDRAVYALKNCDGIVEEATEEELMDVSAQA-DSTGMFVCPHTGVALSALIKLRCKGVIGKTDKTVVVSTA 473 (526)
Q Consensus 396 ~i~i~~-P~~~~~~l~~l~~~~g~~v~Vsd~ei~~A~~~l-~~~Gi~veP~sA~alAal~~l~~~g~i~~~~~vVvv~TG 473 (526)
++..+. |.++. +...+.++.|+|+|+++++++| +++|+++||+||+++||++++.+. +.++++||+++|+
T Consensus 279 gi~~~~~p~~~~------~~~~d~~~~V~d~e~~~a~r~l~~~eGi~~~pssa~alaaal~~~~~--~~~~~~vv~i~~d 350 (527)
T 3pc3_A 279 GIGYDFPPTVFD------DTVVDVWTKIGDSDCFPMSRRLNAEEGLLCGGSSGGAMHAALEHARK--LKKGQRCVVILPD 350 (527)
T ss_dssp SCCCSSCCTTCC------GGGCCEEEEECGGGTHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHTT--CCTTCEEEEEECB
T ss_pred ccCCCCCCcccc------hhhCcEEEEECHHHHHHHHHHHHHHcCceEcHHHHHHHHHHHHHHHH--cCCCCeEEEEEcC
Confidence 665443 33221 3456789999999999999986 779999999999999999998764 5678899999999
Q ss_pred CCCCchHHHH
Q 009781 474 HGLKFTQSKI 483 (526)
Q Consensus 474 ~g~K~~~~~~ 483 (526)
+|.||.+.++
T Consensus 351 ~g~ryls~~~ 360 (527)
T 3pc3_A 351 GIRNYMTKFV 360 (527)
T ss_dssp BGGGGTTTTT
T ss_pred cchhhHhhhh
Confidence 9999987644
No 40
>1qop_B Tryptophan synthase beta chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.79.1.1 PDB: 1k7e_B* 1k7f_B* 1kfb_B* 1k3u_B* 1tjp_B* 1wbj_B* 2cli_B* 2clk_B* 2cll_B* 2j9x_B* 3cep_B* 1kfc_B* 1k8x_B* 1kfj_B* 1kfk_B* 2rh9_B* 2rhg_B* 2j9y_B* 1cw2_B* 1a5s_B* ...
Probab=100.00 E-value=8.2e-44 Score=376.09 Aligned_cols=299 Identities=15% Similarity=0.139 Sum_probs=235.3
Q ss_pred CCCceecccccccccCCCcEEEEecCCCCCCchhhhhHHHHHHHHHHHHhcCCCceEEEE-eccchHHHHHHHHHHhcCC
Q 009781 170 NSNLFWAERFGKEFLQMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLKRMNKPVIGVGC-ASTGDTSAALSAYCASAGV 248 (526)
Q Consensus 170 ~TPL~~~~~l~~~~lg~~~l~lK~E~~nPTGSFKDRga~~~v~~a~~~~~~g~~~~~Vv~-aSSGN~g~AlAa~aa~~Gi 248 (526)
.|||++++++++. +| .+||+|+|++|||||||||++.+++..+. +.|+ .+|++ +||||||.|+|++|+++|+
T Consensus 55 ~TPL~~~~~l~~~-~g-~~i~lK~E~l~ptGSfK~R~a~~~~~~a~---~~g~--~~vi~e~ssGNhg~a~A~aa~~~G~ 127 (396)
T 1qop_B 55 PTALTKCQNITAG-TR-TTLYLKREDLLHGGAHKTNQVLGQALLAK---RMGK--SEIIAETGAGQHGVASALASALLGL 127 (396)
T ss_dssp SCCEEECHHHHTT-SS-EEEEEEEGGGSTTSBTHHHHHHHHHHHHH---HTTC--CEEEEEESSSHHHHHHHHHHHHHTC
T ss_pred CCCcEEhhhhhhc-cC-CeEEEEeccCCCCCcHHHHHHHHHHHHHH---HcCc--CEEEEecCchHHHHHHHHHHHHCCC
Confidence 5999999998876 67 48999999999999999999988887654 3343 35555 8999999999999999999
Q ss_pred CEEEEcCCCcCCH--HhHHhHHhCCCEEEEECC---CHHHHHHHHHHH-HhcC-C-eeeccCC---chh--HH-hHHHHH
Q 009781 249 PSIVFLPANKISI--AQLVQPIANGAFVLSLDT---DFDGCMQLIREV-TSEL-P-IYLANSL---NSL--RL-EGQKTA 314 (526)
Q Consensus 249 ~~~V~vP~~~~s~--~k~~q~~~~GA~Vi~v~g---~~dd~~~~~~~~-~~~~-~-~~~~ns~---Np~--~i-~G~~T~ 314 (526)
+|+||||++.++. .++.+|+.+||+|+.++. +++++.+.+++. +++. + +|..++. +|+ .+ .||+|+
T Consensus 128 ~~~i~mp~~~~~~~~~~~~~~~~~GA~V~~v~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~n~~p~~~~v~~g~~t~ 207 (396)
T 1qop_B 128 KCRIYMGAKDVERQSPNVFRMRLMGAEVIPVHSGSATLKDACNEALRDWSGSYETAHYMLGTAAGPHPYPTIVREFQRMI 207 (396)
T ss_dssp EEEEEEEHHHHHHCHHHHHHHHHTTCEEEEECSTTSSHHHHHHHHHHHHHHHTTTEEECCCSSCSSTTHHHHHHHTTTHH
T ss_pred cEEEEEcCCchhhhhhHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHhccCCcEEEeCCcCCCCCchHHHHHHHhHH
Confidence 9999999852333 345789999999999985 799998887764 4443 4 3444432 333 23 489999
Q ss_pred HHHHHHHcC---CCCCcEEEEeCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCc----hHHHHHHhCCcccc--
Q 009781 315 AIEILQQFD---WEVPDWVIVPGGNLGNIYAFYKGFQMCKELGLVDRIPRLVCAQAANAN----PLYLYYKSGWKDFK-- 385 (526)
Q Consensus 315 a~EI~eQl~---~~~pd~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prvi~Vq~~~~~----~l~~a~~~G~~~~~-- 385 (526)
++||++|+. +..||+||+|+|+||+++|++.+|++ +|.+|||+||++++. .+.+++..|.....
T Consensus 208 ~~Ei~~Ql~~~~~~~~d~vvvpvG~GG~~~Gi~~~~~~-------~~~~~vigVe~~~~~~~~~~~~~~l~~g~~~~~~g 280 (396)
T 1qop_B 208 GEETKAQILDKEGRLPDAVIACVGGGSNAIGMFADFIN-------DTSVGLIGVEPGGHGIETGEHGAPLKHGRVGIYFG 280 (396)
T ss_dssp HHHHHHHHHHHHSSCCSEEEEECSSSHHHHHHHGGGTT-------CTTSEEEEEEEEETBGGGTBSCCHHHHSEEEEETE
T ss_pred HHHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHHhc-------CCCCEEEEEeCCCccccchhhHHHHHcCCeeeecc
Confidence 999999992 24699999999999999999988762 277899999999853 35567777743210
Q ss_pred -----------ccCCccccccccccCCCccHHHHHHHHHhCCCeEEEeCHHHHHHHHHHH-HhcCCeecchHHHHHHHHH
Q 009781 386 -----------PVRANTTFASAIQIGDPVSIDRAVYALKNCDGIVEEATEEELMDVSAQA-DSTGMFVCPHTGVALSALI 453 (526)
Q Consensus 386 -----------~~~~~~Tia~~i~i~~P~~~~~~l~~l~~~~g~~v~Vsd~ei~~A~~~l-~~~Gi~veP~sA~alAal~ 453 (526)
+.....|++++|+++.+.. ......+...+.++.|+|+|++++++++ +++|++++|++|++++++.
T Consensus 281 ~~~~~~~~~~g~~~~~~tia~gl~~~~~g~--~~~~l~~~~~~~~~~V~d~e~~~a~~~l~~~egi~~~~~sa~a~a~a~ 358 (396)
T 1qop_B 281 MKAPMMQTADGQIEESYSISAGLDFPSVGP--QHAYLNSIGRADYVSITDDEALEAFKTLCRHEGIIPALESSHALAHAL 358 (396)
T ss_dssp EEEEECBCTTSCBCCCCCSSGGGCCSSCCH--HHHHHHHTTSSEEEEEEHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHH
T ss_pred chhhhcccccCCcCCCceeeccCCCCCCCH--HHHHHHhcCCeEEEEECHHHHHHHHHHHHHhcCCccccchHHHHHHHH
Confidence 0124579999998755543 3444455566889999999999999986 7799999999999999999
Q ss_pred HHHHcCCCC-CCCeEEEEECCCCCCchHHHHhhh
Q 009781 454 KLRCKGVIG-KTDKTVVVSTAHGLKFTQSKIDYH 486 (526)
Q Consensus 454 ~l~~~g~i~-~~~~vVvv~TG~g~K~~~~~~~~~ 486 (526)
++.++ +. ++++||+++||+|.||++.+.++.
T Consensus 359 ~l~~~--~~~~~~~vv~i~tg~g~k~~~~~~~~~ 390 (396)
T 1qop_B 359 KMMRE--QPEKEQLLVVNLSGRGDKDIFTVHDIL 390 (396)
T ss_dssp HHHHH--STTSCEEEEEEECBBCGGGHHHHHHHC
T ss_pred HHHHh--cCCCCCeEEEEECCCCCCCHHHHHHHh
Confidence 88765 34 688999999999999999876554
No 41
>2o2e_A Tryptophan synthase beta chain; amino-acid biosynthesis, tryptophan biosynthesis, structural genomics; 2.20A {Mycobacterium tuberculosis} PDB: 2o2j_A
Probab=100.00 E-value=1.2e-43 Score=377.53 Aligned_cols=302 Identities=17% Similarity=0.185 Sum_probs=211.9
Q ss_pred cCCCceecccccccccCCCcEEEEecCCCCCCchhhhhHHHHHHHHHHHHhcCCCceEEEEeccchHHHHHHHHHHhcCC
Q 009781 169 GNSNLFWAERFGKEFLQMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLKRMNKPVIGVGCASTGDTSAALSAYCASAGV 248 (526)
Q Consensus 169 G~TPL~~~~~l~~~~lg~~~l~lK~E~~nPTGSFKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSGN~g~AlAa~aa~~Gi 248 (526)
..|||++++++++. +|..+||+|+|++|||||||||++.+++..+++ .|++ ..|+++|+||||.|+|++|+++|+
T Consensus 80 ~~TPL~~~~~Ls~~-~gg~~i~lK~E~lnptGSfK~R~a~~~~~~a~~---~g~~-~vI~~~ssGNhG~A~A~aaa~~G~ 154 (422)
T 2o2e_A 80 RPSPLYEATRLSQH-AGSARIFLKREDLNHTGSHKINNVLGQALLARR---MGKT-RVIAETGAGQHGVATATACALLGL 154 (422)
T ss_dssp CSCCEEECGGGGGG-TTTCEEEEECGGGCCSSTTHHHHHHHHHHHHHH---TTCC-EEEEEESSSHHHHHHHHHHHHHTC
T ss_pred CCCCeEEChhhHhh-cCCCeEEEEEcCCCCCCcHHHHHHHHHHHHHHH---cCCC-eEEEecCccHHHHHHHHHHHHcCC
Confidence 35999999999887 765689999999999999999999888776543 3432 456679999999999999999999
Q ss_pred CEEEEcCCCcCC--HHhHHhHHhCCCEEEEECC---CHHHHHHHHHH-HHhc-CC-eeeccCC---chh---HHhHHHHH
Q 009781 249 PSIVFLPANKIS--IAQLVQPIANGAFVLSLDT---DFDGCMQLIRE-VTSE-LP-IYLANSL---NSL---RLEGQKTA 314 (526)
Q Consensus 249 ~~~V~vP~~~~s--~~k~~q~~~~GA~Vi~v~g---~~dd~~~~~~~-~~~~-~~-~~~~ns~---Np~---~i~G~~T~ 314 (526)
+|+||||++.+. ..|+.+|+.+||+|+.++. +++++.+.+.+ ++++ .+ +|..++. +|+ ...||+|+
T Consensus 155 ~~~I~mp~~~~~~q~~kv~~~~~~GA~Vv~v~~~~~~~~da~~~a~~~~~~~~~~~~yi~~s~~g~~p~~~~v~~~q~t~ 234 (422)
T 2o2e_A 155 DCVIYMGGIDTARQALNVARMRLLGAEVVAVQTGSKTLKDAINEAFRDWVANADNTYYCFGTAAGPHPFPTMVRDFQRII 234 (422)
T ss_dssp EEEEEEEHHHHHHSHHHHHHHHHTTCEEEEECSTTSCHHHHHHHHHHHHHHHTTTEEECCCCSSSCCCCHHHHHHHTTHH
T ss_pred cEEEEeCCCcchhhHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHhcCCCcEEEeCCccCCCCcHHHHHHHHHHH
Confidence 999999985322 3566789999999999974 79999887755 4554 34 4544442 332 23589999
Q ss_pred HHHHHHHcC---CCCCcEEEEeCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCC----chHHHHHHhCCcccc--
Q 009781 315 AIEILQQFD---WEVPDWVIVPGGNLGNIYAFYKGFQMCKELGLVDRIPRLVCAQAANA----NPLYLYYKSGWKDFK-- 385 (526)
Q Consensus 315 a~EI~eQl~---~~~pd~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prvi~Vq~~~~----~~l~~a~~~G~~~~~-- 385 (526)
++||++|+. +..||+||+|+|+||+++|++.+|+. ++.+|||+||++++ +.+.+++..|.....
T Consensus 235 g~Ei~~Ql~~~~~~~pD~vvvpvG~GG~~~Gi~~~~~~-------~p~v~vigVe~~g~~~~~~~~~~~l~~g~~~~~~g 307 (422)
T 2o2e_A 235 GMEARVQIQGQAGRLPDAVVACVGGGSNAIGIFHAFLD-------DPGVRLVGFEAAGDGVETGRHAATFTAGSPGAFHG 307 (422)
T ss_dssp HHHHHHHHHHHSSSCCSEEEEEGGGHHHHHTTSGGGTT-------CTTCEEEEEEECC----------------------
T ss_pred HHHHHHHHHHhhCCCCCEEEEccCCchhHHHHHHHHhc-------CCCCeEEEEecCCCcccchhHHHHHHcCCceeccc
Confidence 999999972 24699999999999999999877641 37789999999996 345677777743210
Q ss_pred -----------ccCCccccccccccCCCccHHHHHHHHHhCCCeEEEeCHHHHHHHHHHH-HhcCCeecchHHHHHHHHH
Q 009781 386 -----------PVRANTTFASAIQIGDPVSIDRAVYALKNCDGIVEEATEEELMDVSAQA-DSTGMFVCPHTGVALSALI 453 (526)
Q Consensus 386 -----------~~~~~~Tia~~i~i~~P~~~~~~l~~l~~~~g~~v~Vsd~ei~~A~~~l-~~~Gi~veP~sA~alAal~ 453 (526)
......|++++|+++.+.. +...+.+...+.++.|+|+|++++++++ +++|++++|++|.+++++.
T Consensus 308 ~~~~~~~~~~g~~~~~~tia~gl~~~~~g~--~~~~l~~~~~~~~~~Vsd~e~~~a~~~l~~~eGi~~~~esa~A~a~a~ 385 (422)
T 2o2e_A 308 SFSYLLQDEDGQTIESHSISAGLDYPGVGP--EHAWLKEAGRVDYRPITDSEAMDAFGLLCRMEGIIPAIESAHAVAGAL 385 (422)
T ss_dssp -----------------------------------------CCEEEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_pred cchhhcccccccccCCceeecccCCCCCCH--HHHHHHHhCCeeEEEECHHHHHHHHHHHHHHcCCccCchHHHHHHHHH
Confidence 0123578999998755443 2334444555788999999999999986 7799999999999999998
Q ss_pred HHHHcCCCCCCCeEEEEECCCCCCchHHHHhhh
Q 009781 454 KLRCKGVIGKTDKTVVVSTAHGLKFTQSKIDYH 486 (526)
Q Consensus 454 ~l~~~g~i~~~~~vVvv~TG~g~K~~~~~~~~~ 486 (526)
++.++ +.++++||+++||+|.||++.+.++.
T Consensus 386 ~l~~~--~~~~~~vvvilsG~g~kd~~~~~~~~ 416 (422)
T 2o2e_A 386 KLGVE--LGRGAVIVVNLSGRGDKDVETAAKWF 416 (422)
T ss_dssp HHHHH--HCTTCEEEEECCSCSSSHHHHHHHHC
T ss_pred HHHHh--cCCCCEEEEEeCCCCCCCHHHHHHHH
Confidence 88765 35788999999999999999876554
No 42
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=100.00 E-value=1.6e-43 Score=364.46 Aligned_cols=281 Identities=15% Similarity=0.136 Sum_probs=229.0
Q ss_pred hcccccCCCceecccccccccCCCcEEEEecCCCC--CCchhhhhHHHHHHHHHHHHhcCCCceEEEEe--ccchHHHHH
Q 009781 164 VSAFEGNSNLFWAERFGKEFLQMNDLWVKHCGISH--TGSFKDLGMTVLVSQVNRLKRMNKPVIGVGCA--STGDTSAAL 239 (526)
Q Consensus 164 vsl~eG~TPL~~~~~l~~~~lg~~~l~lK~E~~nP--TGSFKDRga~~~v~~a~~~~~~g~~~~~Vv~a--SSGN~g~Al 239 (526)
+++..++|||++++++++. +|. +||+|+|++|| +||||||.+.+++..+.+ .| ..+||++ |+||||.|+
T Consensus 15 i~~~~~~TPL~~~~~l~~~-~g~-~i~~K~E~~~p~~~gs~K~R~~~~~i~~a~~---~G--~~~vv~~G~ssGN~g~al 87 (325)
T 1j0a_A 15 VELIPWETPIQYLPNISRE-IGA-DVYIKRDDLTGLGIGGNKIRKLEYLLGDALS---KG--ADVVITVGAVHSNHAFVT 87 (325)
T ss_dssp CCCCCSCCCEEECHHHHHH-HTS-EEEEEEGGGSCSTTCSTHHHHHHHHHHHHHH---TT--CSEEEEECCTTCHHHHHH
T ss_pred cccccCCCCceEhhhhhhh-hCC-EEEEEecccCCCCCCchHHHHHHHHHHHHHH---cC--CCEEEEcCCcchHHHHHH
Confidence 5678899999999988765 665 89999999999 999999999998887643 34 3578886 999999999
Q ss_pred HHHHHhcCCCEEEEcCCCcC-CHHhHHhHHhCCCEEEEECCCHH-----HHHHHHHHHHhcCCe-eec-cC-CchhHHhH
Q 009781 240 SAYCASAGVPSIVFLPANKI-SIAQLVQPIANGAFVLSLDTDFD-----GCMQLIREVTSELPI-YLA-NS-LNSLRLEG 310 (526)
Q Consensus 240 Aa~aa~~Gi~~~V~vP~~~~-s~~k~~q~~~~GA~Vi~v~g~~d-----d~~~~~~~~~~~~~~-~~~-ns-~Np~~i~G 310 (526)
|++|+++|++|+||||.+ . +..|+.+++.+||+|+.++++++ ++.+.+++++++.+. |+. +. .||...+|
T Consensus 88 A~~a~~~G~~~~iv~p~~-~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~p~~~~n~~~~~g 166 (325)
T 1j0a_A 88 GLAAKKLGLDAILVLRGK-EELKGNYLLDKIMGIETRVYDAKDSFELMKYAEEIAEELKREGRKPYVIPPGGASPIGTLG 166 (325)
T ss_dssp HHHHHHTTCEEEEEEESC-CCSCHHHHHHHHTTCEEEEESCCSTTTHHHHHHHHHHHHTTSSCCEEEECGGGCSHHHHTH
T ss_pred HHHHHHhCCcEEEEECCC-CCCCchHHHHHHCCCEEEEeCcchhhhhhHHHHHHHHHHHHcCCceEEEcCCCCCHHHHHH
Confidence 999999999999999997 6 78899999999999999998874 678888888887753 333 33 58999999
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCchHHHHHHhCCccccccCCc
Q 009781 311 QKTAAIEILQQFDWEVPDWVIVPGGNLGNIYAFYKGFQMCKELGLVDRIPRLVCAQAANANPLYLYYKSGWKDFKPVRAN 390 (526)
Q Consensus 311 ~~T~a~EI~eQl~~~~pd~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prvi~Vq~~~~~~l~~a~~~G~~~~~~~~~~ 390 (526)
++|+++||++|+++ .||+||+|+|+||+++|++++|+++ + +.+|||+||+++++++.+...
T Consensus 167 ~~t~~~Ei~~q~~~-~~d~vv~~vGtGGt~~Gi~~~lk~~---~---~~~~vigVe~~~~~~~~~~~~------------ 227 (325)
T 1j0a_A 167 YVRAVGEIATQSEV-KFDSIVVAAGSGGTLAGLSLGLSIL---N---EDIRPVGIAVGRFGEVMTSKL------------ 227 (325)
T ss_dssp HHHHHHHHHHHCCC-CCSEEEEEESSSHHHHHHHHHHHHT---T---CCCEEEEEECSSCSSSHHHHH------------
T ss_pred HHHHHHHHHHhhCC-CCCEEEEeCCchHhHHHHHHHHHhc---C---CCceEEEEEecCchHHHHHHH------------
Confidence 99999999999963 6999999999999999999998853 2 668999999999888765421
Q ss_pred cccccccc--cCCCccHHHHHHHHHhCCCeEEEeCHHHHHHHHHHH-HhcCCeecch-HHHHHHHHHHHHHcCCCCCCCe
Q 009781 391 TTFASAIQ--IGDPVSIDRAVYALKNCDGIVEEATEEELMDVSAQA-DSTGMFVCPH-TGVALSALIKLRCKGVIGKTDK 466 (526)
Q Consensus 391 ~Tia~~i~--i~~P~~~~~~l~~l~~~~g~~v~Vsd~ei~~A~~~l-~~~Gi~veP~-sA~alAal~~l~~~g~i~~~~~ 466 (526)
.|+++++. ++.|.... ..+.++..+. +.|+|+|++++++++ +++|+++||+ +|++++|++++.+++.+ +++
T Consensus 228 ~t~~~~~~~~~g~~~~~~--~~~~~~~~~~-~~v~d~e~~~a~~~l~~~~gi~~ep~ssa~a~aa~~~~~~~~~~--~~~ 302 (325)
T 1j0a_A 228 DNLIKEAAELLGVKVEVR--PELYDYSFGE-YGKITGEVAQIIRKVGTREGIILDPVYTGKAFYGLVDLARKGEL--GEK 302 (325)
T ss_dssp HHHHHHHHHHTTCCCCSC--CEEEECSTTS-TTCCCHHHHHHHHHHHHHHSCCCCTTTHHHHHHHHHHHHHTTCS--CSE
T ss_pred HHHHHHHHHhcCCCCCCC--cEEecCcccC-CCCCCHHHHHHHHHHHHhhCcccccchHHHHHHHHHHHHHcCCC--CCc
Confidence 23333332 11111100 0123556677 999999999999986 6799999995 99999999999887654 789
Q ss_pred EEEEECCCCC
Q 009781 467 TVVVSTAHGL 476 (526)
Q Consensus 467 vVvv~TG~g~ 476 (526)
||+++||++.
T Consensus 303 Vv~i~tGG~~ 312 (325)
T 1j0a_A 303 ILFIHTGGIS 312 (325)
T ss_dssp EEEEECCCHH
T ss_pred EEEEECCCch
Confidence 9999999753
No 43
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=88.20 E-value=3.4 Score=38.48 Aligned_cols=115 Identities=18% Similarity=0.163 Sum_probs=72.3
Q ss_pred CCCCchhhhhHHHHHHHHHHHHhcCCCceEEEEeccchHHHHHHHHHHhcCCCEEEEc-------C-CCcCCHHhHHhHH
Q 009781 197 SHTGSFKDLGMTVLVSQVNRLKRMNKPVIGVGCASTGDTSAALSAYCASAGVPSIVFL-------P-ANKISIAQLVQPI 268 (526)
Q Consensus 197 nPTGSFKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~v-------P-~~~~s~~k~~q~~ 268 (526)
+|.--.-+......+.+++++ |-+ ..||..|||.++..++-.. .|++++++- | ....+++.+..++
T Consensus 22 ~~G~eNT~~tl~la~era~e~---~Ik-~iVVAS~sG~TA~k~~e~~--~~i~lVvVTh~~GF~~pg~~e~~~e~~~~L~ 95 (201)
T 1vp8_A 22 KPGRENTEETLRLAVERAKEL---GIK-HLVVASSYGDTAMKALEMA--EGLEVVVVTYHTGFVREGENTMPPEVEEELR 95 (201)
T ss_dssp SCSGGGHHHHHHHHHHHHHHH---TCC-EEEEECSSSHHHHHHHHHC--TTCEEEEEECCTTSSSTTCCSSCHHHHHHHH
T ss_pred CCCcccHHHHHHHHHHHHHHc---CCC-EEEEEeCCChHHHHHHHHh--cCCeEEEEeCcCCCCCCCCCcCCHHHHHHHH
Confidence 344444466666667766553 322 4567777888886655422 789988886 3 2246788888899
Q ss_pred hCCCEEEEECCCHHHHHHHHHHHHhcCCe-eeccCC-chhH-HhHHHH-HHHHHHH
Q 009781 269 ANGAFVLSLDTDFDGCMQLIREVTSELPI-YLANSL-NSLR-LEGQKT-AAIEILQ 320 (526)
Q Consensus 269 ~~GA~Vi~v~g~~dd~~~~~~~~~~~~~~-~~~ns~-Np~~-i~G~~T-~a~EI~e 320 (526)
..|++|+.-.--+....+... ++.+. +.+.-. +-+| +.||.+ ++.||.-
T Consensus 96 ~~G~~V~t~tH~lsgveR~is---~kfGG~~p~eiiA~tLR~~fgqG~KV~vEi~l 148 (201)
T 1vp8_A 96 KRGAKIVRQSHILSGLERSIS---RKLGGVSRTEAIAEALRSLFGHGLKVCVEITI 148 (201)
T ss_dssp HTTCEEEECCCTTTTTHHHHH---HHTCCCCHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred hCCCEEEEEeccccchhHHHH---HhcCCCCHHHHHHHHHHHHhcCCceEEEEEee
Confidence 999999876654544444333 34432 322222 6678 889987 7788753
No 44
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=77.87 E-value=0.71 Score=39.60 Aligned_cols=25 Identities=8% Similarity=0.174 Sum_probs=21.5
Q ss_pred CCCCCCCCcccCCCcee-eCC-CCCcc
Q 009781 87 NAGPSCTESYSLDEVVY-RSQ-SGGLL 111 (526)
Q Consensus 87 ~~t~~cg~~~~~~~~~~-~c~-cGGll 111 (526)
-+|++||.+|..++... .|| ||+..
T Consensus 74 ~~C~~CG~~~e~~~~~~~~CP~Cgs~~ 100 (119)
T 2kdx_A 74 LECKDCSHVFKPNALDYGVCEKCHSKN 100 (119)
T ss_dssp EECSSSSCEECSCCSTTCCCSSSSSCC
T ss_pred EEcCCCCCEEeCCCCCCCcCccccCCC
Confidence 45999999999988888 897 88874
No 45
>2xvc_A ESCRT-III, SSO0910; cell cycle, cell division, cytokinesis, winged-helix; 2.15A {Sulfolobus solfataricus}
Probab=73.88 E-value=3.4 Score=30.70 Aligned_cols=36 Identities=11% Similarity=0.238 Sum_probs=30.3
Q ss_pred HHHHHHHHhCCCeE--------EEeCHHHHHHHHHHHHhcCCee
Q 009781 406 DRAVYALKNCDGIV--------EEATEEELMDVSAQADSTGMFV 441 (526)
Q Consensus 406 ~~~l~~l~~~~g~~--------v~Vsd~ei~~A~~~l~~~Gi~v 441 (526)
+.+++.++.++|.+ +.|+.+|++.+.+.|++.|++.
T Consensus 13 ~~lL~yIr~sGGildI~~~a~kygV~kdeV~~~LrrLe~KGLI~ 56 (59)
T 2xvc_A 13 RELLDYIVNNGGFLDIEHFSKVYGVEKQEVVKLLEALKNKGLIA 56 (59)
T ss_dssp HHHHHHHHHTTSEEEHHHHHHHHCCCHHHHHHHHHHHHHTTSEE
T ss_pred HHHHHHHHHcCCEEeHHHHHHHhCCCHHHHHHHHHHHHHCCCee
Confidence 45788889888875 3799999999999999999863
No 46
>3a43_A HYPD, hydrogenase nickel incorporation protein HYPA; [NIFE] hydrogenase maturation, zinc-finger, nickel binding, metal-binding; HET: FME; 2.30A {Pyrococcus kodakaraensis} PDB: 3a44_A*
Probab=73.56 E-value=0.71 Score=40.88 Aligned_cols=24 Identities=17% Similarity=0.239 Sum_probs=19.8
Q ss_pred CCCCCCCcccCCC-----------c----------eeeCC-CCCcc
Q 009781 88 AGPSCTESYSLDE-----------V----------VYRSQ-SGGLL 111 (526)
Q Consensus 88 ~t~~cg~~~~~~~-----------~----------~~~c~-cGGll 111 (526)
+|++||.+++.++ . ...|| ||+.-
T Consensus 72 ~C~~CG~~~~~~~~~~~~~~~~~~~~h~~p~~~~~~~~CP~Cgs~~ 117 (139)
T 3a43_A 72 KCRNCNYEWKLKEVKDKFDERIKEDIHFIPEVVHAFLACPKCGSHD 117 (139)
T ss_dssp EETTTCCEEEGGGCTTCCSCCCGGGCCCCGGGCGGGCSCSSSSCCC
T ss_pred ECCCCCCEEecccccccccccccccccccccccccCCcCccccCCc
Confidence 5999999999888 6 67897 88863
No 47
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=73.26 E-value=11 Score=35.21 Aligned_cols=114 Identities=14% Similarity=0.125 Sum_probs=68.0
Q ss_pred CCCCchhhhhHHHHHHHHHHHHhcCCCceEEEEeccchHHHHHHHHHHhcCCCEEEEc-------C-CCcCCHHhHHhHH
Q 009781 197 SHTGSFKDLGMTVLVSQVNRLKRMNKPVIGVGCASTGDTSAALSAYCASAGVPSIVFL-------P-ANKISIAQLVQPI 268 (526)
Q Consensus 197 nPTGSFKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~v-------P-~~~~s~~k~~q~~ 268 (526)
+|.--.-+......+.+++++ +-+ ..||..|||.++..++-.. .| +++++- | ....+++.+..++
T Consensus 30 ~~G~eNT~~tl~la~era~e~---~Ik-~iVVASssG~TA~k~~e~~--~~-~lVvVTh~~GF~~pg~~e~~~e~~~~L~ 102 (206)
T 1t57_A 30 EPGKENTERVLELVGERADQL---GIR-NFVVASVSGETALRLSEMV--EG-NIVSVTHHAGFREKGQLELEDEARDALL 102 (206)
T ss_dssp SCSGGGHHHHHHHHHHHHHHH---TCC-EEEEECSSSHHHHHHHTTC--CS-EEEEECCCTTSSSTTCCSSCHHHHHHHH
T ss_pred CCCcccHHHHHHHHHHHHHHc---CCC-EEEEEeCCCHHHHHHHHHc--cC-CEEEEeCcCCCCCCCCCcCCHHHHHHHH
Confidence 344444466677777766554 322 4566777888886554321 45 666665 3 2246777888899
Q ss_pred hCCCEEEEECCCHHHHHHHHHHHHhcCC-eeeccCC-chhHHhHHHH-HHHHHHH
Q 009781 269 ANGAFVLSLDTDFDGCMQLIREVTSELP-IYLANSL-NSLRLEGQKT-AAIEILQ 320 (526)
Q Consensus 269 ~~GA~Vi~v~g~~dd~~~~~~~~~~~~~-~~~~ns~-Np~~i~G~~T-~a~EI~e 320 (526)
..|++|+.-.--+....+.+.+ +.+ +|.+.-. +-+|+.||.+ ++.||.-
T Consensus 103 ~~G~~V~t~tH~lsG~eR~is~---kfGG~~p~eiiA~tLR~fgqG~KV~vEi~l 154 (206)
T 1t57_A 103 ERGVNVYAGSHALSGVGRGISN---RFGGVTPVEIMAETLRMVSQGFKVCVEIAI 154 (206)
T ss_dssp HHTCEEECCSCTTTTHHHHHHH---HHCSCCHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred hCCCEEEEeeccccchhHHHHH---hcCCCCHHHHHHHHHHHhCCCceEEEEEee
Confidence 9999998655444434333332 333 2322222 5678888887 7778754
No 48
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=66.18 E-value=3.2 Score=29.54 Aligned_cols=23 Identities=13% Similarity=0.260 Sum_probs=17.4
Q ss_pred CCCCCCCcccCCCcee----eCC-CCCc
Q 009781 88 AGPSCTESYSLDEVVY----RSQ-SGGL 110 (526)
Q Consensus 88 ~t~~cg~~~~~~~~~~----~c~-cGGl 110 (526)
+|-+||++++.+|... +|| ||--
T Consensus 5 ~C~rCg~~fs~~el~~lP~IrCpyCGyr 32 (48)
T 4ayb_P 5 RCGKCWKTFTDEQLKVLPGVRCPYCGYK 32 (48)
T ss_dssp CCCCTTTTCCCCCSCCCSSSCCTTTCCS
T ss_pred EeeccCCCccHHHHhhCCCcccCccCcE
Confidence 4999999999887732 587 7643
No 49
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=63.42 E-value=40 Score=33.48 Aligned_cols=110 Identities=6% Similarity=0.122 Sum_probs=67.6
Q ss_pred EeccchHHHHHHHHHHhcCCCEEEEcCCCcC---------------CHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHh
Q 009781 229 CASTGDTSAALSAYCASAGVPSIVFLPANKI---------------SIAQLVQPIANGAFVLSLDTDFDGCMQLIREVTS 293 (526)
Q Consensus 229 ~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~---------------s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~ 293 (526)
.--+|-.|..++..|+++|++++++-+.... ...........+.+++............+.++.+
T Consensus 6 ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~~~~~~~aD~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~~ 85 (363)
T 4ffl_A 6 LVGGKLQGFEAAYLSKKAGMKVVLVDKNPQALIRNYADEFYCFDVIKEPEKLLELSKRVDAVLPVNENLACIEFLNSIKE 85 (363)
T ss_dssp EECCSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTTSSEEEECCTTTCHHHHHHHHTSSSEEEECCCCHHHHHHHHHHGG
T ss_pred EECCCHHHHHHHHHHHHCCCEEEEEeCCCCChhHhhCCEEEECCCCcCHHHHHHHhcCCCEEEECCCChhHHHHHHHHHH
Confidence 3345778999999999999999888543110 0111111234567776655444445556666777
Q ss_pred cCCeeeccCCchhHHhHHHHHHHHHHHHcCCCC-------CcEEEEeCCchh
Q 009781 294 ELPIYLANSLNSLRLEGQKTAAIEILQQFDWEV-------PDWVIVPGGNLG 338 (526)
Q Consensus 294 ~~~~~~~ns~Np~~i~G~~T~a~EI~eQl~~~~-------pd~VvVP~G~Gg 338 (526)
+.+....++..-..+.+-|....+++++.+-.. .-.|+=|..++|
T Consensus 86 ~~~~~~g~~~~a~~~~~dK~~~k~~l~~~gip~~~~~~ig~P~vvKp~~g~g 137 (363)
T 4ffl_A 86 KFSCPVLFDFEAYRISRDKKKSKDYFKSIGVPTPQDRPSKPPYFVKPPCESS 137 (363)
T ss_dssp GCSSCBCCCHHHHHHHTSHHHHHHHHHHTTCCCCCBSCSSSCEEEECSSCCT
T ss_pred HCCCccCCCHHHHHHhhCHHHHHHHHHhcCCCCCCceecCCCEEEEECCCCC
Confidence 666544444455678888999999999876211 225666654443
No 50
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=57.32 E-value=24 Score=33.96 Aligned_cols=68 Identities=10% Similarity=0.037 Sum_probs=47.0
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhH----HhHHhCCCEEEEECC---CHHHHHHHHHHHHhcC
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQL----VQPIANGAFVLSLDT---DFDGCMQLIREVTSEL 295 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~----~q~~~~GA~Vi~v~g---~~dd~~~~~~~~~~~~ 295 (526)
...||+..++--|.++|..-++.|-+++++-- +..++ .++...|.+++.+.. +.+++.+++++..++.
T Consensus 8 KvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~----~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 8 KVVIVTGAGSGIGRAIAKKFALNDSIVVAVEL----LEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY 82 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEEC----CHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 46788888888899999777788988766532 22222 345678888876664 4667777777776654
No 51
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=57.01 E-value=3.4 Score=37.20 Aligned_cols=49 Identities=12% Similarity=0.081 Sum_probs=30.4
Q ss_pred CccchhHHHhcCCCCCCC-cc----eeeccCCCCCCCCCcccCCCceeeCC-CCCcc
Q 009781 61 GINIRDEARRRNVIYTHK-FS----AKYVPFNAGPSCTESYSLDEVVYRSQ-SGGLL 111 (526)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~-~~----~~y~s~~~t~~cg~~~~~~~~~~~c~-cGGll 111 (526)
+.++|.-|....-.-..+ .. ..|. .+|.+||+.|+.......|| ||+.+
T Consensus 104 D~~l~~vA~~~Gv~v~~~~~~i~~~~~~~--y~C~~Cg~~~~~~~~~~~Cp~CG~~~ 158 (165)
T 2lcq_A 104 DYNVQNIASLLGLRFRTLKRGIKKVIKWR--YVCIGCGRKFSTLPPGGVCPDCGSKV 158 (165)
T ss_dssp CHHHHHHHHHTTCCEECCSCCCSSCCCCC--EEESSSCCEESSCCGGGBCTTTCCBE
T ss_pred cHHHHHHHHHCCCeEEchhhhccccccEE--EECCCCCCcccCCCCCCcCCCCCCcc
Confidence 446777777765542122 22 2233 36999999998544445796 99985
No 52
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=53.32 E-value=66 Score=30.12 Aligned_cols=71 Identities=10% Similarity=0.038 Sum_probs=45.9
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
...+|+..+|--|.++|..-.+.|.+++++--.......-..++...|.++..+..| .++..+.++++.++
T Consensus 8 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (252)
T 3h7a_A 8 ATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH 81 (252)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh
Confidence 367888888888999998888889987776532211122233456678888767654 44555566665544
No 53
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=50.56 E-value=45 Score=31.85 Aligned_cols=71 Identities=14% Similarity=0.078 Sum_probs=44.7
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
...+|+..+|--|.++|..-.+.|.+++++.-.......-..++...|.++..+..| .+++.+.++++.++
T Consensus 33 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 106 (276)
T 3r1i_A 33 KRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGE 106 (276)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 367888888888999998888889987776543211122223455666666555543 45566666665544
No 54
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=49.36 E-value=1.6e+02 Score=27.21 Aligned_cols=44 Identities=11% Similarity=0.037 Sum_probs=29.8
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEEecC
Q 009781 312 KTAAIEILQQFDWEVPDWVIVPGGNLGNIYAFYKGFQMCKELGLVDRIPRLVCAQAA 368 (526)
Q Consensus 312 ~T~a~EI~eQl~~~~pd~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prvi~Vq~~ 368 (526)
-.++.|=+++++ .+.|||++-+|-+..-++..| -| .+||+|.-.
T Consensus 32 l~la~era~e~~---Ik~iVVAS~sG~TA~k~~e~~-----~~-----i~lVvVTh~ 75 (201)
T 1vp8_A 32 LRLAVERAKELG---IKHLVVASSYGDTAMKALEMA-----EG-----LEVVVVTYH 75 (201)
T ss_dssp HHHHHHHHHHHT---CCEEEEECSSSHHHHHHHHHC-----TT-----CEEEEEECC
T ss_pred HHHHHHHHHHcC---CCEEEEEeCCChHHHHHHHHh-----cC-----CeEEEEeCc
Confidence 345666666765 688999999988876555322 22 389998743
No 55
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=49.36 E-value=30 Score=33.29 Aligned_cols=73 Identities=12% Similarity=-0.053 Sum_probs=47.7
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHhcCC
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDTD---FDGCMQLIREVTSELP 296 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~~~ 296 (526)
...||+..++--|.++|..-++.|.++++..-....-..-..++...|.+++.+..| .+++.+.++++.++.+
T Consensus 10 KvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 85 (255)
T 4g81_D 10 KTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGI 85 (255)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence 367888887888999998888899887665322100011123456778888777654 5667777777766654
No 56
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=49.14 E-value=42 Score=32.21 Aligned_cols=71 Identities=14% Similarity=0.074 Sum_probs=45.6
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECC---CHHHHHHHHHHHHhcC
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDT---DFDGCMQLIREVTSEL 295 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g---~~dd~~~~~~~~~~~~ 295 (526)
...+|+..++--|.++|..-++.|.+++++.-.. ........+...|.++..+.. +.+++.+.+++..++.
T Consensus 8 KvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~ 81 (258)
T 4gkb_A 8 KVVIVTGGASGIGGAISMRLAEERAIPVVFARHA-PDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATF 81 (258)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC-CCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCc-ccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHh
Confidence 4678888888889999988888899887776432 233344455555655544443 3555666666665543
No 57
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=48.76 E-value=35 Score=31.80 Aligned_cols=72 Identities=15% Similarity=0.158 Sum_probs=46.1
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEc-CCCcCCHHhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHhcC
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFL-PANKISIAQLVQPIANGAFVLSLDTD---FDGCMQLIREVTSEL 295 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~v-P~~~~s~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~~ 295 (526)
...+|+..+|--|.++|..-.+.|.++++.. ............+...|.++..+..| .++..+.++++.++.
T Consensus 14 k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 89 (256)
T 3ezl_A 14 RIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEV 89 (256)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhc
Confidence 4667777778889999988888899887766 32211222334455677776656544 455666666665554
No 58
>3u31_A SIR2A, transcriptional regulatory protein SIR2 homologue; Zn-binding domain, rossmann fold domain; HET: MYK NAD; 2.20A {Plasmodium falciparum} PDB: 3u3d_A* 3jwp_A*
Probab=47.56 E-value=6.9 Score=38.76 Aligned_cols=59 Identities=5% Similarity=0.031 Sum_probs=34.7
Q ss_pred eEEEEeccchH--HHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHH
Q 009781 225 IGVGCASTGDT--SAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDTDFDGCMQLIREV 291 (526)
Q Consensus 225 ~~Vv~aSSGN~--g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~ 291 (526)
..|+..||++. ++.+..++...|.+++++=++. +.... .-+.+ .+.|+.++..++++.+
T Consensus 219 llLviGTSl~V~Paa~l~~~a~~~g~~~v~IN~~~-t~~~~------~~~d~-~i~g~a~~vl~~~~~l 279 (290)
T 3u31_A 219 LLLVIGTSSTVSTATNLCHFACKKKKKIVEINISK-TYITN------KMSDY-HVCAKFSELTKVANIL 279 (290)
T ss_dssp EEEEESCCSCSHHHHHHHHHHHHTTCCEEEEESSC-CTTTT------TTCSE-EEESCGGGHHHHHHHH
T ss_pred EEEEECcCCcchhHHHHHHHHHHcCCEEEEECCCC-CCCCC------ccceE-EEECCHHHHHHHHHHH
Confidence 45666777765 5666667777888888776653 22111 01333 3567777666655544
No 59
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=47.09 E-value=54 Score=30.91 Aligned_cols=72 Identities=18% Similarity=0.122 Sum_probs=45.2
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHhcC
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDTD---FDGCMQLIREVTSEL 295 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~~ 295 (526)
...+|+..+|--|.++|..-.+.|.+++++.-....-..-..++...|.++..+..| .++..+.++++.++.
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (264)
T 3ucx_A 12 KVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAY 86 (264)
T ss_dssp CEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred cEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 367888888889999998778889987766432100111123355667777666554 455566666665543
No 60
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=45.77 E-value=55 Score=30.36 Aligned_cols=71 Identities=20% Similarity=0.212 Sum_probs=44.1
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
...+|+..+|.-|.++|..-.+.|.+++++--.......-..++...|.++..+..| .++..+.++++.++
T Consensus 10 k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (253)
T 3qiv_A 10 KVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAE 83 (253)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 367888888889999998888889987665432110111123345678887777655 44455555555443
No 61
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=44.83 E-value=52 Score=30.43 Aligned_cols=71 Identities=10% Similarity=0.038 Sum_probs=44.2
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHhcC
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDTD---FDGCMQLIREVTSEL 295 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~~ 295 (526)
..+|+..+|--|.++|..-.+.|.+++++.-.......-...+...|.++..+..| .++..+.++++.++.
T Consensus 7 ~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (247)
T 3lyl_A 7 VALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAEN 80 (247)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 56788888888999998777889987766543211111123355667777666544 455566666665543
No 62
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=44.80 E-value=1.2e+02 Score=28.68 Aligned_cols=31 Identities=10% Similarity=0.053 Sum_probs=22.8
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEc
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFL 254 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~v 254 (526)
...+|+..+|--|.++|..-.+.|.+++++.
T Consensus 13 k~vlITGas~GIG~~~a~~L~~~G~~V~~~~ 43 (311)
T 3o26_A 13 RCAVVTGGNKGIGFEICKQLSSNGIMVVLTC 43 (311)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cEEEEecCCchHHHHHHHHHHHCCCEEEEEe
Confidence 3567777777788999877777788766554
No 63
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=44.68 E-value=99 Score=29.31 Aligned_cols=57 Identities=12% Similarity=0.029 Sum_probs=37.6
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCCH
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDTDF 281 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~~ 281 (526)
...+|+..+|--|.++|..-.+.|.+++++- ..........++...|.++..+..|.
T Consensus 32 k~~lVTGas~GIG~aia~~la~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~Dv 88 (273)
T 3uf0_A 32 RTAVVTGAGSGIGRAIAHGYARAGAHVLAWG-RTDGVKEVADEIADGGGSAEAVVADL 88 (273)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-SSTHHHHHHHHHHTTTCEEEEEECCT
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEc-CHHHHHHHHHHHHhcCCcEEEEEecC
Confidence 3678888888889999988788899887776 32111222234556677776665543
No 64
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=44.67 E-value=11 Score=28.58 Aligned_cols=31 Identities=16% Similarity=0.294 Sum_probs=21.9
Q ss_pred CcceeeccCCCCCCCCCcccCCC-ceeeCC-CCCcce
Q 009781 78 KFSAKYVPFNAGPSCTESYSLDE-VVYRSQ-SGGLLD 112 (526)
Q Consensus 78 ~~~~~y~s~~~t~~cg~~~~~~~-~~~~c~-cGGll~ 112 (526)
..-|+|+ |.+||.+++++. ..++|+ ||.-..
T Consensus 17 ~~~v~Y~----C~~Cg~~~~l~~~~~iRC~~CG~RIL 49 (63)
T 3h0g_L 17 PATMIYL----CADCGARNTIQAKEVIRCRECGHRVM 49 (63)
T ss_dssp --CCCCB----CSSSCCBCCCCSSSCCCCSSSCCCCC
T ss_pred CCCeEEE----CCCCCCeeecCCCCceECCCCCcEEE
Confidence 3357776 799999998863 457895 887543
No 65
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=44.36 E-value=52 Score=31.35 Aligned_cols=71 Identities=15% Similarity=0.115 Sum_probs=46.0
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCc-CCHHhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANK-ISIAQLVQPIANGAFVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~-~s~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
...+|+..+|--|.++|..-.+.|.+++++.-... .......++...|.++..+..| .++..+.++++.++
T Consensus 32 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 106 (271)
T 3v2g_A 32 KTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEA 106 (271)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 36788888888899999888888998877743321 1111233455678887666654 45556666666554
No 66
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=44.01 E-value=49 Score=31.14 Aligned_cols=72 Identities=13% Similarity=0.075 Sum_probs=46.0
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcC-CHHhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHhcC
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKI-SIAQLVQPIANGAFVLSLDTD---FDGCMQLIREVTSEL 295 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~-s~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~~ 295 (526)
...+|+..+|--|.++|..-.+.|.+++++.-.+.. .......+...|.++..+..| .++..+.++++.++.
T Consensus 9 k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (259)
T 3edm_A 9 RTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKF 84 (259)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 367888888888999998778889998877443211 111233455667666555544 555666666665543
No 67
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=43.18 E-value=66 Score=30.37 Aligned_cols=70 Identities=11% Similarity=-0.036 Sum_probs=42.9
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
..+|+..+|--|.+++..-.+.|.+++++.-..........++...|.++..+..| .++..+.++++.++
T Consensus 33 ~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 105 (272)
T 1yb1_A 33 IVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE 105 (272)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 57888888999999998888889887766432110111122345567776656554 44455556555444
No 68
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=42.68 E-value=57 Score=30.23 Aligned_cols=70 Identities=16% Similarity=0.120 Sum_probs=42.2
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHh
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDTD---FDGCMQLIREVTS 293 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~ 293 (526)
...+|+..+|.-|.+++..-.+.|.+++++.-...........+...|.++..+..| .++..+.++++.+
T Consensus 14 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (260)
T 3awd_A 14 RVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHE 86 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 357888888999999998878889887776532110111123345567666555554 3444455554433
No 69
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=42.01 E-value=85 Score=29.30 Aligned_cols=72 Identities=15% Similarity=0.028 Sum_probs=44.1
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHhcC
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDTD---FDGCMQLIREVTSEL 295 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~~ 295 (526)
...+|+..+|--|.++|..-.+.|.+++++.-..........++...|.++..+..| .++..+.++++.++.
T Consensus 10 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (260)
T 2ae2_A 10 CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF 84 (260)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 357888888999999998778889887766432100011122344567777666554 445555666555443
No 70
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=41.58 E-value=89 Score=29.04 Aligned_cols=68 Identities=15% Similarity=0.099 Sum_probs=44.1
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
..+|+..+|--|.+++..-.+.|.+++++.-.. ......++...|.++..+..| .++..+.++++.++
T Consensus 6 ~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 76 (255)
T 2q2v_A 6 TALVTGSTSGIGLGIAQVLARAGANIVLNGFGD--PAPALAEIARHGVKAVHHPADLSDVAQIEALFALAERE 76 (255)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc--hHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHH
Confidence 568888888899999987788898877664332 233334555667777766655 34445555554443
No 71
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=41.56 E-value=1.4e+02 Score=27.63 Aligned_cols=54 Identities=11% Similarity=-0.073 Sum_probs=32.9
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCC-EEEEcCCCcCCHHhHHhHHhC--CCEEEEECCC
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVP-SIVFLPANKISIAQLVQPIAN--GAFVLSLDTD 280 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~-~~V~vP~~~~s~~k~~q~~~~--GA~Vi~v~g~ 280 (526)
..+|+..+|--|.++|..-.+.|.+ ++++. .+ .....+..+... |.++..+..|
T Consensus 7 ~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~-r~-~~~~~~~~l~~~~~~~~~~~~~~D 63 (254)
T 1sby_A 7 NVIFVAALGGIGLDTSRELVKRNLKNFVILD-RV-ENPTALAELKAINPKVNITFHTYD 63 (254)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTCCSEEEEEE-SS-CCHHHHHHHHHHCTTSEEEEEECC
T ss_pred EEEEECCCChHHHHHHHHHHHCCCcEEEEEe-cC-chHHHHHHHHHhCCCceEEEEEEe
Confidence 5678888888899999888888998 54443 32 122333333322 4555555544
No 72
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=41.34 E-value=2.2e+02 Score=26.42 Aligned_cols=46 Identities=20% Similarity=0.231 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEE-ECCCCCCchHHHHhhhcchhhH
Q 009781 447 VALSALIKLRCKGVIGKTDKTVVV-STAHGLKFTQSKIDYHSQNIKD 492 (526)
Q Consensus 447 ~alAal~~l~~~g~i~~~~~vVvv-~TG~g~K~~~~~~~~~~~~~~~ 492 (526)
+|+-...-..+.|.|..++.||.+ -|+.|....-.+--.|.+.+-|
T Consensus 148 V~vEi~lMAaDAGlIp~geeVIAiGGT~~GaDTAlVirPAhs~~ffd 194 (206)
T 1t57_A 148 VCVEIAIMAADAGLIPVDEEVIAIGGTAWGADTALVLTPAHMNSVFD 194 (206)
T ss_dssp HHHHHHHHHHHTTSSCSSSCEEEEECSSSSCCEEEEEECCCGGGGGG
T ss_pred EEEEEeeeeecCCCCCCCCeEEEEccccCCcceEEEEeecccCCcce
Confidence 344444444688999888888887 5888876544444445544444
No 73
>1m2k_A Silent information regulator 2; protein-ligand complex, gene regulation; HET: APR; 1.47A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1m2g_A* 1m2h_A* 1m2j_A* 1m2n_A* 1ici_A*
Probab=41.32 E-value=9.2 Score=36.82 Aligned_cols=29 Identities=24% Similarity=0.525 Sum_probs=20.8
Q ss_pred eeeccCCCCCCCCCcccCCCc-----eeeCC-CCCcce
Q 009781 81 AKYVPFNAGPSCTESYSLDEV-----VYRSQ-SGGLLD 112 (526)
Q Consensus 81 ~~y~s~~~t~~cg~~~~~~~~-----~~~c~-cGGll~ 112 (526)
+..+. |..|++.|+.++. .-+|+ |||++.
T Consensus 119 ~~~~~---C~~C~~~~~~~~~~~~~~~p~C~~Cgg~lr 153 (249)
T 1m2k_A 119 LRVVR---CTSCNNSFEVESAPKIPPLPKCDKCGSLLR 153 (249)
T ss_dssp EEEEE---ESSSSCEEECSSCCCSSSCCBCSSSSSBEE
T ss_pred cceeE---eCCCCCcccchhhccCCCCCCCCCCCCCcC
Confidence 45566 8899998876442 45785 999874
No 74
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=41.30 E-value=73 Score=30.24 Aligned_cols=71 Identities=11% Similarity=0.067 Sum_probs=43.2
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHhcC
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDTD---FDGCMQLIREVTSEL 295 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~~ 295 (526)
..+|+..+|--|.++|..-.+.|.+++++.-..........++...|.++..+..| .++..+.++++.++.
T Consensus 24 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 97 (277)
T 2rhc_B 24 VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY 97 (277)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHh
Confidence 57888888999999998888889887766422100011122344567766655544 445555566555443
No 75
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=41.22 E-value=66 Score=30.50 Aligned_cols=71 Identities=15% Similarity=0.169 Sum_probs=46.1
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHh-HHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQ-LVQPIANGAFVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
...+|+..+|--|.++|..-.+.|.++++..-.+.....+ ..++...|.++..+..| .+++.+.++++.++
T Consensus 28 k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 102 (267)
T 3u5t_A 28 KVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEA 102 (267)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3678888888889999987788899988775432111111 22355678777666544 55566666666554
No 76
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=41.16 E-value=84 Score=29.89 Aligned_cols=67 Identities=7% Similarity=-0.067 Sum_probs=47.7
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHhcC
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDTD---FDGCMQLIREVTSEL 295 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~~ 295 (526)
..||+..++--|.++|..-++.|.++++.. .+..+..++...+.++..+..| .+++.+.+++..++.
T Consensus 4 ~vlVTGas~GIG~aia~~la~~Ga~V~~~~----~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~ 73 (247)
T 3ged_A 4 GVIVTGGGHGIGKQICLDFLEAGDKVCFID----IDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKL 73 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 568888888889999988888999877753 2445666666667666656544 566677777666654
No 77
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=40.61 E-value=49 Score=31.10 Aligned_cols=71 Identities=13% Similarity=0.115 Sum_probs=43.7
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
...+|+..+|--|.++|..-.+.|.+++++.-.......-...+...|.++..+..| .++..+.++++.++
T Consensus 13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 86 (256)
T 3gaf_A 13 AVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQ 86 (256)
T ss_dssp CEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 367888888888999997777889987766432110111122355678777666654 44555556555444
No 78
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=40.33 E-value=58 Score=31.02 Aligned_cols=71 Identities=14% Similarity=0.010 Sum_probs=44.0
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
...+|+..+|--|.++|..-.+.|.+++++.-...........+...|.++..+..| .++..+.++++.++
T Consensus 25 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 98 (279)
T 3sju_A 25 QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVER 98 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 367888888888999997777889987665432110111123355667777666554 44555566665544
No 79
>2akl_A PHNA-like protein PA0128; two domains, Zn binding protein, beta-strand protein, structural genomics, PSI; NMR {Pseudomonas aeruginosa PAO1} SCOP: b.34.11.2 g.41.3.5
Probab=39.90 E-value=12 Score=32.39 Aligned_cols=26 Identities=12% Similarity=0.339 Sum_probs=19.5
Q ss_pred CCCCCCCCCcccCC-CceeeCC-CCCcc
Q 009781 86 FNAGPSCTESYSLD-EVVYRSQ-SGGLL 111 (526)
Q Consensus 86 ~~~t~~cg~~~~~~-~~~~~c~-cGGll 111 (526)
.++|+.|+.+|..+ ...|.|| |+.=+
T Consensus 27 lP~CP~C~seytYeDg~l~vCPeC~hEW 54 (138)
T 2akl_A 27 LPPCPQCNSEYTYEDGALLVCPECAHEW 54 (138)
T ss_dssp SCCCTTTCCCCCEECSSSEEETTTTEEE
T ss_pred CCCCCCCCCcceEecCCeEECCcccccc
Confidence 35799999998875 4577896 77654
No 80
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=39.78 E-value=55 Score=31.39 Aligned_cols=70 Identities=11% Similarity=0.117 Sum_probs=43.7
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHh-HHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQ-LVQPIANGAFVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
...+|+..+|--|.++|..-++.|.+++++.-.. ....+ ..++...|.++..+..| .++..+.++++.++
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 102 (283)
T 3v8b_A 29 PVALITGAGSGIGRATALALAADGVTVGALGRTR-TEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLK 102 (283)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSH-HHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 3678888888889999988788899877764321 11111 12344567777666654 44555666665544
No 81
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=39.51 E-value=55 Score=30.83 Aligned_cols=71 Identities=11% Similarity=0.079 Sum_probs=45.3
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCH-HhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISI-AQLVQPIANGAFVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~-~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
...+|+..+|--|.++|..-.+.|.++++..-.+.... .-..++...|.++..+..| .++..+.++++.++
T Consensus 5 k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (258)
T 3oid_A 5 KCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDET 79 (258)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 35788888888899999888888999888644331111 1123355678777666654 45556666665544
No 82
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=39.42 E-value=72 Score=29.66 Aligned_cols=66 Identities=17% Similarity=0.166 Sum_probs=41.7
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhH----HhHHhCCCEEEEECCC---HHHHHHHHHHHHh
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQL----VQPIANGAFVLSLDTD---FDGCMQLIREVTS 293 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~----~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~ 293 (526)
...+|+..+|.-|.++|..-.+.|.+++++.-. ..++ .++...|.++..+..| .++..+.++++.+
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 80 (247)
T 2jah_A 8 KVALITGASSGIGEATARALAAEGAAVAIAARR----VEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVE 80 (247)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC----HHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 367888888999999998777889887666422 2222 2344557666655544 4445555555544
No 83
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=38.98 E-value=82 Score=29.31 Aligned_cols=71 Identities=10% Similarity=0.107 Sum_probs=42.5
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHhcC
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDTD---FDGCMQLIREVTSEL 295 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~~ 295 (526)
..+|+..+|.-|.+++..-.+.|.+++++.-.......-...+...|.++..+..| .++..+.++++.++.
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 77 (256)
T 1geg_A 4 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTL 77 (256)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 56888888889999998878889887766432100011112344557666555544 444555566555443
No 84
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=38.95 E-value=63 Score=30.31 Aligned_cols=69 Identities=17% Similarity=0.087 Sum_probs=41.4
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHh
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDTD---FDGCMQLIREVTS 293 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~ 293 (526)
..+|+..+|--|.++|..-.+.|.+++++.-...........+...|.++..+..| .++..+.++++.+
T Consensus 31 ~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 102 (262)
T 3rkr_A 31 VAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLA 102 (262)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHH
Confidence 56787777888999997777889987665432110111122345678777666654 3444445554433
No 85
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=38.51 E-value=76 Score=29.08 Aligned_cols=57 Identities=14% Similarity=0.071 Sum_probs=36.8
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHH-hHHhHHhCCCEEEEECCCH
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIA-QLVQPIANGAFVLSLDTDF 281 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~-k~~q~~~~GA~Vi~v~g~~ 281 (526)
..+|+..+|.-|.+++..-.+.|.+++++.-.+..... ...++...|.++..+..|.
T Consensus 7 ~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~ 64 (247)
T 2hq1_A 7 TAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDV 64 (247)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCT
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCC
Confidence 57888888899999998888889988777322211111 1233455677776666553
No 86
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Probab=38.33 E-value=1.4e+02 Score=30.75 Aligned_cols=96 Identities=14% Similarity=0.047 Sum_probs=56.1
Q ss_pred CCCCCchhhhhHHHHHHHHHHHHhcC----CCceEEEEeccchHHHHHHHHHHh-cCCCEEEEcCC-CcCCH--------
Q 009781 196 ISHTGSFKDLGMTVLVSQVNRLKRMN----KPVIGVGCASTGDTSAALSAYCAS-AGVPSIVFLPA-NKISI-------- 261 (526)
Q Consensus 196 ~nPTGSFKDRga~~~v~~a~~~~~~g----~~~~~Vv~aSSGN~g~AlAa~aa~-~Gi~~~V~vP~-~~~s~-------- 261 (526)
-+|.|--+ +...++++.+..+ .+...+|+..|+--|.|+|...++ .|.+++++.-. .....
T Consensus 21 ~hp~gc~~-----~v~~qi~~~~~~~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwy 95 (405)
T 3zu3_A 21 AHPTGCEA-----NVKKQIDYVTTEGPIANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWY 95 (405)
T ss_dssp CCHHHHHH-----HHHHHHHHHHHHCCCTTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHH
T ss_pred CCCHHHHH-----HHHHHHHHHHhcCCcCCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccch
Confidence 46777443 3344444433222 234678888888889999877777 89988766422 11110
Q ss_pred --Hh-HHhHHhCCCEEEEECCC---HHHHHHHHHHHHhcCC
Q 009781 262 --AQ-LVQPIANGAFVLSLDTD---FDGCMQLIREVTSELP 296 (526)
Q Consensus 262 --~k-~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~~~ 296 (526)
.. ...+...|.++..+..| .+++.+.++++.++.+
T Consensus 96 n~~~~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v~~i~~~~G 136 (405)
T 3zu3_A 96 NSAAFHKFAAQKGLYAKSINGDAFSDEIKQLTIDAIKQDLG 136 (405)
T ss_dssp HHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHTS
T ss_pred hHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 11 22455678777666554 5566667777766654
No 87
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=38.32 E-value=2.3e+02 Score=28.90 Aligned_cols=51 Identities=16% Similarity=0.025 Sum_probs=37.1
Q ss_pred EEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCCH
Q 009781 226 GVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDTDF 281 (526)
Q Consensus 226 ~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~~ 281 (526)
.||+. -|..|..++-.-...|++++|+-. ++.++..++..|..++.-+.+-
T Consensus 7 viIiG-~Gr~G~~va~~L~~~g~~vvvId~----d~~~v~~~~~~g~~vi~GDat~ 57 (413)
T 3l9w_A 7 VIIAG-FGRFGQITGRLLLSSGVKMVVLDH----DPDHIETLRKFGMKVFYGDATR 57 (413)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCCEEEEEC----CHHHHHHHHHTTCCCEESCTTC
T ss_pred EEEEC-CCHHHHHHHHHHHHCCCCEEEEEC----CHHHHHHHHhCCCeEEEcCCCC
Confidence 45554 599999999888889999888743 3456777778888876555443
No 88
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=38.05 E-value=69 Score=30.89 Aligned_cols=71 Identities=13% Similarity=-0.004 Sum_probs=43.7
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
...+|+..||--|.++|....+.|.+++++.-....-..-...+...|.++..+..| .++..+.++++.++
T Consensus 32 k~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 105 (301)
T 3tjr_A 32 RAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRL 105 (301)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence 367888888888999998888889887665432110011122345567777655544 45556666665544
No 89
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=37.96 E-value=65 Score=30.60 Aligned_cols=70 Identities=10% Similarity=0.027 Sum_probs=43.6
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
..+|+..+|--|.++|..-.+.|.+++++.-....-..-..++...|.++..+..| .++..+.++++.++
T Consensus 6 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 78 (264)
T 3tfo_A 6 VILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDT 78 (264)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 56888888888999998888889987766422100011122345678887666554 45556666665554
No 90
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=37.83 E-value=54 Score=31.19 Aligned_cols=72 Identities=10% Similarity=-0.025 Sum_probs=43.9
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHhcC
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDTD---FDGCMQLIREVTSEL 295 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~~ 295 (526)
...+|+..+|--|.++|..-.+.|.+++++--.......-..++...|.++..+..| .++..+.++++.++.
T Consensus 27 k~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 101 (271)
T 4ibo_A 27 RTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQG 101 (271)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHT
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence 357787777888999998778889876654322100011123345678777777655 445566666665543
No 91
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=37.32 E-value=74 Score=30.60 Aligned_cols=71 Identities=17% Similarity=0.144 Sum_probs=42.5
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHhcC
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDTD---FDGCMQLIREVTSEL 295 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~~ 295 (526)
..+|+..+|--|.+++..-.+.|.+++++.-..........++...|.++..+..| .++..+.++++.++.
T Consensus 36 ~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 109 (291)
T 3cxt_A 36 IALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCDVTDEDGIQAMVAQIESEV 109 (291)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 67888888999999998777889887766422100011122344556555444443 445556666655543
No 92
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=37.13 E-value=98 Score=28.39 Aligned_cols=69 Identities=19% Similarity=0.178 Sum_probs=42.3
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHH-hHHhHHhCCCEEEEECCCH---HHHHHHHHHHHh
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIA-QLVQPIANGAFVLSLDTDF---DGCMQLIREVTS 293 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~-k~~q~~~~GA~Vi~v~g~~---dd~~~~~~~~~~ 293 (526)
..+|+..+|--|.+++..-.+.|.+++++.-....... ...++...|.++..+..|. ++..+.++++.+
T Consensus 9 ~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 81 (258)
T 3afn_B 9 RVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVA 81 (258)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 56788888888999997777889987776533111111 2233455677776666553 344444544433
No 93
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=37.07 E-value=57 Score=30.97 Aligned_cols=70 Identities=16% Similarity=0.118 Sum_probs=43.8
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCC-HHhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKIS-IAQLVQPIANGAFVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s-~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
..+|+..+|--|.++|..-.+.|.++++..-.+... ......+...|.++..+..| .++..+.++++.++
T Consensus 30 ~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~ 103 (269)
T 4dmm_A 30 IALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIER 103 (269)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 567777778889999988788899887765432111 11223355677777666654 44455555555444
No 94
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=37.07 E-value=40 Score=31.67 Aligned_cols=66 Identities=11% Similarity=0.158 Sum_probs=42.1
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHH----hHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLV----QPIANGAFVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~----q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
..+|+..+|--|.++|..-.+.|.+++++.-. ..+.. ++...|.++..+..| .++..+.++++.++
T Consensus 8 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 80 (257)
T 3imf_A 8 VVIITGGSSGMGKGMATRFAKEGARVVITGRT----KEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEK 80 (257)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 56777777888999998778889987665432 22222 233567777666554 45566666666554
No 95
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=36.99 E-value=81 Score=30.24 Aligned_cols=70 Identities=13% Similarity=0.080 Sum_probs=44.9
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHh-HHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQ-LVQPIANGAFVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
..+|+..+|--|.++|..-.+.|.+++++.-.......+ ...+...|.++..+..| .+++.+.++++.++
T Consensus 49 ~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 122 (291)
T 3ijr_A 49 NVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ 122 (291)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 678888888889999988888899877765332111111 22345678888767655 44555566655544
No 96
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=36.92 E-value=2.7e+02 Score=26.21 Aligned_cols=57 Identities=12% Similarity=0.071 Sum_probs=36.0
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCc-CC-----H-HhHHhHHhCCCEEEEECCC
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANK-IS-----I-AQLVQPIANGAFVLSLDTD 280 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~-~s-----~-~k~~q~~~~GA~Vi~v~g~ 280 (526)
...+|+..+|--|.++|..-.+.|.+++++.-... .. . .....+...|.++..+..|
T Consensus 10 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 73 (285)
T 3sc4_A 10 KTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGD 73 (285)
T ss_dssp CEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECC
Confidence 36788888888899999877888998777653321 00 0 1122344557777666544
No 97
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=36.28 E-value=91 Score=30.32 Aligned_cols=70 Identities=14% Similarity=0.136 Sum_probs=45.5
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCC----------CcCCHHhHHhHHhCCCEEEEECCC---HHHHHHHHHHH
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPA----------NKISIAQLVQPIANGAFVLSLDTD---FDGCMQLIREV 291 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~----------~~~s~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~ 291 (526)
..+|+..+|--|.++|..-.+.|.+++++.-. ..........+...|.++..+..| .+++.+.++++
T Consensus 29 ~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 108 (322)
T 3qlj_A 29 VVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLIQTA 108 (322)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 56777777888999997777889988877421 100111223456778888877765 45556666666
Q ss_pred Hhc
Q 009781 292 TSE 294 (526)
Q Consensus 292 ~~~ 294 (526)
.++
T Consensus 109 ~~~ 111 (322)
T 3qlj_A 109 VET 111 (322)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 98
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=35.93 E-value=1.4e+02 Score=28.95 Aligned_cols=54 Identities=13% Similarity=0.025 Sum_probs=37.2
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHH---hHHhCCCEEEEEC
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLV---QPIANGAFVLSLD 278 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~---q~~~~GA~Vi~v~ 278 (526)
+.+|+..||..|.+++......|.+++++.=.....+.+.. .+...|++++..+
T Consensus 12 ~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~D 68 (346)
T 3i6i_A 12 RVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGL 68 (346)
T ss_dssp CEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECC
T ss_pred eEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEee
Confidence 56888899999999988777889998888743212333433 3445677776544
No 99
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=35.89 E-value=1.3e+02 Score=29.86 Aligned_cols=105 Identities=9% Similarity=0.088 Sum_probs=53.2
Q ss_pred EEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcC---------------CHHhHHh-HHhCCCEEEEECCCHHHHHHHHH
Q 009781 226 GVGCASTGDTSAALSAYCASAGVPSIVFLPANKI---------------SIAQLVQ-PIANGAFVLSLDTDFDGCMQLIR 289 (526)
Q Consensus 226 ~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~---------------s~~k~~q-~~~~GA~Vi~v~g~~dd~~~~~~ 289 (526)
.|+...+|..|..++..++++|++++++.+.... +...+.. ++..+.+++...-..- ....+
T Consensus 13 ~ili~g~g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~~d~~~~~~~~d~~~l~~~~~~~~~d~v~~~~e~~-~~~~~- 90 (391)
T 1kjq_A 13 RVMLLGSGELGKEVAIECQRLGVEVIAVDRYADAPAMHVAHRSHVINMLDGDALRRVVELEKPHYIVPEIEAI-ATDML- 90 (391)
T ss_dssp EEEEESCSHHHHHHHHHHHTTTCEEEEEESSTTCGGGGGSSEEEECCTTCHHHHHHHHHHHCCSEEEECSSCS-CHHHH-
T ss_pred EEEEECCCHHHHHHHHHHHHcCCEEEEEECCCCCchhhhccceEECCCCCHHHHHHHHHHcCCCEEEECCCcC-CHHHH-
Confidence 3444455777888888888888887777653211 1112222 2234565554432211 01122
Q ss_pred HHHhcCCeeeccCCchhHHhHHHHHHHHHH-HHcCCCCCcEEEE
Q 009781 290 EVTSELPIYLANSLNSLRLEGQKTAAIEIL-QQFDWEVPDWVIV 332 (526)
Q Consensus 290 ~~~~~~~~~~~ns~Np~~i~G~~T~a~EI~-eQl~~~~pd~VvV 332 (526)
+..++.+.+..++.....+..-|....+++ ++.+-..|.+.++
T Consensus 91 ~~l~~~gi~~~~~~~~~~~~~dK~~~~~~l~~~~gip~p~~~~~ 134 (391)
T 1kjq_A 91 IQLEEEGLNVVPCARATKLTMNREGIRRLAAEELQLPTSTYRFA 134 (391)
T ss_dssp HHHHHTTCEESSCHHHHHHHHSHHHHHHHHHTTSCCCBCCEEEE
T ss_pred HHHHhCCCCcCCCHHHHHHhhCHHHHHHHHHHhCCCCCCCeeee
Confidence 223445554444444556677777777776 5554223444443
No 100
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=35.83 E-value=95 Score=29.51 Aligned_cols=37 Identities=32% Similarity=0.627 Sum_probs=22.9
Q ss_pred CCcEEEEeCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCch
Q 009781 326 VPDWVIVPGGNLGNIYAFYKGFQMCKELGLVDRIPRLVCAQAANANP 372 (526)
Q Consensus 326 ~pd~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prvi~Vq~~~~~~ 372 (526)
.||.|||-- --..-.++ +|+.++|+ .+||+...+|+|
T Consensus 157 ~Pdll~v~D-p~~e~~ai----~EA~~l~I-----PvIaivDTn~dp 193 (231)
T 3bbn_B 157 LPDIVIIVD-QQEEYTAL----RECITLGI-----PTICLIDTNCNP 193 (231)
T ss_dssp CCSEEEESC-TTTTHHHH----HHHHTTTC-----CEEECCCSSSCC
T ss_pred CCCEEEEeC-CccccHHH----HHHHHhCC-----CEEEEecCCCCc
Confidence 588877652 22333333 38888876 277877777664
No 101
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=35.77 E-value=79 Score=29.59 Aligned_cols=69 Identities=12% Similarity=0.091 Sum_probs=41.9
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHh-HHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQ-LVQPIANGAFVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
..+|+..+|--|.++|..-.+.|.+++++.-.. ....+ ..++...|.++..+..| .++..+.++++.++
T Consensus 9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (262)
T 1zem_A 9 VCLVTGAGGNIGLATALRLAEEGTAIALLDMNR-EALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRD 81 (262)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 578888888999999988888898877664221 01111 12344557666655544 44455555555443
No 102
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=35.53 E-value=1.8e+02 Score=28.77 Aligned_cols=99 Identities=16% Similarity=0.202 Sum_probs=49.3
Q ss_pred eccchHHHHHHHHHHhcCCCEEEEcCCCcCC---------------HHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhc
Q 009781 230 ASTGDTSAALSAYCASAGVPSIVFLPANKIS---------------IAQLVQPIANGAFVLSLDTDFDGCMQLIREVTSE 294 (526)
Q Consensus 230 aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s---------------~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~ 294 (526)
..+|..|..++..+++.|++++++-|....+ ...+.++. .+.+++........ ...+. ..++
T Consensus 7 lg~g~~g~~~~~a~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~-~~~d~v~~~~e~~~-~~~~~-~l~~ 83 (380)
T 3ax6_A 7 IGGGQLGKMMTLEAKKMGFYVIVLDPTPRSPAGQVADEQIVAGFFDSERIEDLV-KGSDVTTYDLEHID-VQTLK-KLYN 83 (380)
T ss_dssp ECCSHHHHHHHHHHHHTTCEEEEEESSTTCTTGGGSSEEEECCTTCHHHHHHHH-HTCSEEEESCSCSC-HHHHH-HHHH
T ss_pred ECCCHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhCceEEECCCCCHHHHHHHH-hcCCEEEecccCCC-HHHHH-HHHH
Confidence 3446677777777778888877776642111 11122221 34444433221100 11122 2234
Q ss_pred CCeeeccCCchhHHhHHHHHHHHHHHHcCCCCCcEEE
Q 009781 295 LPIYLANSLNSLRLEGQKTAAIEILQQFDWEVPDWVI 331 (526)
Q Consensus 295 ~~~~~~ns~Np~~i~G~~T~a~EI~eQl~~~~pd~Vv 331 (526)
.+.-..++..-..+...|....+++++.+-..|.+.+
T Consensus 84 ~gi~~~~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~ 120 (380)
T 3ax6_A 84 EGYKIHPSPYTLEIIQDKFVQKEFLKKNGIPVPEYKL 120 (380)
T ss_dssp TTCEESSCHHHHHHHHSHHHHHHHHHHTTCCCCCEEE
T ss_pred CCCeECCCHHHHHHhcCHHHHHHHHHHcCCCCCCeEE
Confidence 4433234444456777777788888776533445443
No 103
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=35.32 E-value=67 Score=30.63 Aligned_cols=71 Identities=13% Similarity=0.123 Sum_probs=44.7
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCC-HHhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKIS-IAQLVQPIANGAFVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s-~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
...+|+..+|--|.++|-.-.+.|.+++++.-.+... ......+...|.++..+..| .++..+.++++.++
T Consensus 30 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 104 (280)
T 4da9_A 30 PVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAE 104 (280)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHH
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 3578888888889999987788899888775322111 11123455678777666654 34455555555443
No 104
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=35.29 E-value=74 Score=29.97 Aligned_cols=70 Identities=14% Similarity=0.126 Sum_probs=44.8
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHH-hHHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIA-QLVQPIANGAFVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~-k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
..+|+..+|.-|.++|..-.+.|.++++..-.+..... ...++...|.++..+..| .++..+.++++.++
T Consensus 28 ~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 101 (272)
T 4e3z_A 28 VVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQ 101 (272)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 56787888888999998888889998776544311111 123355678888777655 44455555555443
No 105
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=35.28 E-value=81 Score=29.42 Aligned_cols=68 Identities=13% Similarity=0.031 Sum_probs=42.0
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCH---Hh-HHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISI---AQ-LVQPIANGAFVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~---~k-~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
..+|+..+|--|.+++..-.+.|.+++++.-.. .. .+ ..++...|.++..+..| .++..+.++++.++
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 78 (258)
T 3a28_C 4 VAMVTGGAQGIGRGISEKLAADGFDIAVADLPQ--QEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEK 78 (258)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTCEEEEEECGG--GHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc--chHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 578888888899999977777898877664221 11 11 22344557777666554 44455555555443
No 106
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=35.25 E-value=2e+02 Score=24.03 Aligned_cols=48 Identities=10% Similarity=0.117 Sum_probs=34.9
Q ss_pred EEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEEC
Q 009781 226 GVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLD 278 (526)
Q Consensus 226 ~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~ 278 (526)
.+++. .|..|..+|......|.+++++-.. +.+...+...|..++.-+
T Consensus 10 viIiG-~G~~G~~la~~L~~~g~~v~vid~~----~~~~~~~~~~g~~~i~gd 57 (140)
T 3fwz_A 10 ALLVG-YGRVGSLLGEKLLASDIPLVVIETS----RTRVDELRERGVRAVLGN 57 (140)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCCEEEEESC----HHHHHHHHHTTCEEEESC
T ss_pred EEEEC-cCHHHHHHHHHHHHCCCCEEEEECC----HHHHHHHHHcCCCEEECC
Confidence 44444 4999999998888899998888553 446666777888775433
No 107
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=35.24 E-value=97 Score=30.73 Aligned_cols=46 Identities=24% Similarity=0.039 Sum_probs=33.7
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEE
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVL 275 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi 275 (526)
..+|.. +|..|.+++.+|+..|.+++++.. ++.++..++.+|++.+
T Consensus 192 ~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~----~~~~~~~~~~lGa~~v 237 (363)
T 3uog_A 192 RVVVQG-TGGVALFGLQIAKATGAEVIVTSS----SREKLDRAFALGADHG 237 (363)
T ss_dssp EEEEES-SBHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHTCSEE
T ss_pred EEEEEC-CCHHHHHHHHHHHHcCCEEEEEec----CchhHHHHHHcCCCEE
Confidence 445555 788899998999999997766543 3456777788898654
No 108
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=35.17 E-value=1.3e+02 Score=28.15 Aligned_cols=71 Identities=14% Similarity=0.036 Sum_probs=47.1
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHH----hHHhCCCEEEEECCC---HHHHHHHHHHHHhcC
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLV----QPIANGAFVLSLDTD---FDGCMQLIREVTSEL 295 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~----q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~~ 295 (526)
...+|+..+|--|.++|..-.+.|.+++++.-.. .+..+.. .+...|.++..+..| .+++.+.++++.++.
T Consensus 12 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 89 (262)
T 3ksu_A 12 KVIVIAGGIKNLGALTAKTFALESVNLVLHYHQA-KDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEF 89 (262)
T ss_dssp CEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCG-GGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEecCc-cCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 3578888888889999988888999888775332 1222222 345568888766654 556666676665553
No 109
>3aw8_A PURK, phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp; HET: AMP; 2.60A {Thermus thermophilus}
Probab=34.99 E-value=1.7e+02 Score=28.89 Aligned_cols=97 Identities=11% Similarity=0.097 Sum_probs=51.3
Q ss_pred ccchHHHHHHHHHHhcCCCEEEEcCCCcC--------------CHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCC
Q 009781 231 STGDTSAALSAYCASAGVPSIVFLPANKI--------------SIAQLVQPIANGAFVLSLDTDFDGCMQLIREVTSELP 296 (526)
Q Consensus 231 SSGN~g~AlAa~aa~~Gi~~~V~vP~~~~--------------s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~ 296 (526)
.+|-.|..++..+++.|++++++.|.... +...+.++. .+.+++........ ...++ ..++.+
T Consensus 6 G~g~~g~~~~~a~~~~G~~v~~~~~~~~~~~~~~a~~~~~~~~d~~~l~~~~-~~~d~v~~~~e~~~-~~~~~-~l~~~g 82 (369)
T 3aw8_A 6 GGGQLGRMLALAGYPLGLSFRFLDPSPEACAGQVGELVVGEFLDEGALLRFA-EGLALVTYEFENVP-VEAAR-RLEGRL 82 (369)
T ss_dssp CCSHHHHHHHHHHTTBTCCEEEEESCTTCGGGGTSEEEECCTTCHHHHHHHH-TTCSEEEECCTTCC-HHHHH-HHHHHS
T ss_pred CCCHHHHHHHHHHHHcCCEEEEEeCCCCChHHHhhceEecCCCCHHHHHHHH-hCCCEEEECCCCcC-HHHHH-HHHHcC
Confidence 34667777777788888888777765211 111122222 45555544322111 12222 223344
Q ss_pred eeeccCCchhHHhHHHHHHHHHHHHcCCCCCcEEE
Q 009781 297 IYLANSLNSLRLEGQKTAAIEILQQFDWEVPDWVI 331 (526)
Q Consensus 297 ~~~~ns~Np~~i~G~~T~a~EI~eQl~~~~pd~Vv 331 (526)
+..++..-..+...|....+++++.+-..|.+.+
T Consensus 83 -~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~ 116 (369)
T 3aw8_A 83 -PLYPPAKALEVAQDRLREKTFFQGLGVPTPPFHP 116 (369)
T ss_dssp -CBSSCHHHHHHHTCHHHHHHHHHHHTCCCCCEEE
T ss_pred -CcCCCHHHHHHhcCHHHHHHHHHHCCCCCCCcee
Confidence 4444444566777788888888876533344443
No 110
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=34.97 E-value=79 Score=29.78 Aligned_cols=71 Identities=13% Similarity=0.136 Sum_probs=45.7
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCC-HHhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKIS-IAQLVQPIANGAFVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s-~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
...+|+..+|--|.++|..-.+.|.++++..-..... ..-...+...|.++..+..| .++..+.++++.++
T Consensus 19 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 93 (270)
T 3is3_A 19 KVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAH 93 (270)
T ss_dssp CEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3567887878889999988888899888765432111 11123455678877666654 45566666666554
No 111
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=34.89 E-value=97 Score=30.45 Aligned_cols=48 Identities=15% Similarity=0.062 Sum_probs=34.1
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEE
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVL 275 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi 275 (526)
...+|...+|..|.+++..++..|.+++++... +.++..++.+|++.+
T Consensus 161 ~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~----~~~~~~~~~~ga~~v 208 (342)
T 4eye_A 161 ETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNR----TAATEFVKSVGADIV 208 (342)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS----GGGHHHHHHHTCSEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCC----HHHHHHHHhcCCcEE
Confidence 345555556889999999999999987766543 235566667788654
No 112
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=34.75 E-value=1e+02 Score=28.93 Aligned_cols=68 Identities=13% Similarity=0.054 Sum_probs=45.4
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEEC-CCHHHHHHHHHHHHhcC
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLD-TDFDGCMQLIREVTSEL 295 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~-g~~dd~~~~~~~~~~~~ 295 (526)
..+|+..+|--|.++|..-.+.|.+++++.-.. .. ....+...|+..+.+| .+.++..+.++++.++.
T Consensus 29 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~--~~-~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 97 (260)
T 3gem_A 29 PILITGASQRVGLHCALRLLEHGHRVIISYRTE--HA-SVTELRQAGAVALYGDFSCETGIMAFIDLLKTQT 97 (260)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESSC--CH-HHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCh--HH-HHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhc
Confidence 578888888889999987778899987775432 22 2333445577777666 34556666676665553
No 113
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=34.71 E-value=15 Score=34.33 Aligned_cols=21 Identities=14% Similarity=-0.069 Sum_probs=17.5
Q ss_pred CCCCCCcccCCCceeeCC-CCCc
Q 009781 89 GPSCTESYSLDEVVYRSQ-SGGL 110 (526)
Q Consensus 89 t~~cg~~~~~~~~~~~c~-cGGl 110 (526)
|+.||..|.- +..+.|| ||.+
T Consensus 174 C~~CG~i~~g-~~p~~CP~C~~~ 195 (202)
T 1yuz_A 174 CPICGYIHKG-EDFEKCPICFRP 195 (202)
T ss_dssp CSSSCCEEES-SCCSBCTTTCCB
T ss_pred ECCCCCEEcC-cCCCCCCCCCCC
Confidence 9999999985 6678998 8865
No 114
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=34.37 E-value=1.6e+02 Score=27.63 Aligned_cols=70 Identities=17% Similarity=0.139 Sum_probs=41.4
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEEC-CCHHHHHHHHHHHHhc
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLD-TDFDGCMQLIREVTSE 294 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~-g~~dd~~~~~~~~~~~ 294 (526)
...+|+..+|--|.++|..-.+.|.+++++--.. ....+...-....+..+.+| .+.+++.+.++++.++
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 82 (271)
T 3tzq_B 12 KVAIITGACGGIGLETSRVLARAGARVVLADLPE-TDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDT 82 (271)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTT-SCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCH-HHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHH
Confidence 3678888888889999988888899877664332 12222221112234444444 2455566666666554
No 115
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=33.89 E-value=68 Score=29.50 Aligned_cols=68 Identities=10% Similarity=0.015 Sum_probs=40.7
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCCH---HHHHHHHHHHH
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDTDF---DGCMQLIREVT 292 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~~---dd~~~~~~~~~ 292 (526)
..+|+..+|.-|.+++..-.+.|.+++++.-...........+...|.++..+..|. ++..+.++++.
T Consensus 13 ~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 83 (255)
T 1fmc_A 13 CAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAI 83 (255)
T ss_dssp EEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred EEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 567888888899999987788898877664321100111223445677776666553 34444444443
No 116
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=33.72 E-value=43 Score=31.73 Aligned_cols=70 Identities=13% Similarity=0.034 Sum_probs=43.3
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCC-HHhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKIS-IAQLVQPIANGAFVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s-~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
..+|+..+|--|.++|..-.+.|.+++++.-.+... ......+...|.++..+..| .++..+.++++.++
T Consensus 31 ~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 104 (271)
T 4iin_A 31 NVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQS 104 (271)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence 567777778889999987788899887776432111 11122345677777666654 44455555555443
No 117
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=33.63 E-value=1.2e+02 Score=28.62 Aligned_cols=71 Identities=13% Similarity=0.011 Sum_probs=43.4
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHh-HHhHHhCCCEEEEECCC---HHHHHHHHHHHHhcC
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQ-LVQPIANGAFVLSLDTD---FDGCMQLIREVTSEL 295 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~~ 295 (526)
...+|+..+|--|.++|..-.+.|.+++++.-.. ....+ ...+...|.++..+..| .++..+.++++.++.
T Consensus 22 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 96 (273)
T 1ae1_A 22 TTALVTGGSKGIGYAIVEELAGLGARVYTCSRNE-KELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF 96 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 3578888889999999988888898876654221 01111 12344567766555544 445555666555443
No 118
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=33.63 E-value=2.4e+02 Score=24.50 Aligned_cols=47 Identities=15% Similarity=-0.024 Sum_probs=33.7
Q ss_pred eEEEEeccchHHHHHHHHHHhc-CCCEEEEcCCCcCCHHhHHhHHhCCCEEEE
Q 009781 225 IGVGCASTGDTSAALSAYCASA-GVPSIVFLPANKISIAQLVQPIANGAFVLS 276 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~-Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~ 276 (526)
..+|+. .|..|..+|....+. |.+++++-. ++.+...+...|++++.
T Consensus 41 ~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~----~~~~~~~~~~~g~~~~~ 88 (183)
T 3c85_A 41 QVLILG-MGRIGTGAYDELRARYGKISLGIEI----REEAAQQHRSEGRNVIS 88 (183)
T ss_dssp SEEEEC-CSHHHHHHHHHHHHHHCSCEEEEES----CHHHHHHHHHTTCCEEE
T ss_pred cEEEEC-CCHHHHHHHHHHHhccCCeEEEEEC----CHHHHHHHHHCCCCEEE
Confidence 345555 599999999888888 999887744 34456666677877653
No 119
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=33.60 E-value=1e+02 Score=29.10 Aligned_cols=71 Identities=15% Similarity=0.033 Sum_probs=43.5
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCC---EEEEECCC---HHHHHHHHHHHHhc
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGA---FVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA---~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
...+|+..+|--|.++|..-.+.|.+++++.-.......-...+...|. ++..+..| .+++.+.++++.++
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 88 (281)
T 3svt_A 12 RTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW 88 (281)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 3678888888889999987788899877664221001111233455555 67666554 45556666666544
No 120
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=33.37 E-value=82 Score=29.18 Aligned_cols=70 Identities=17% Similarity=0.174 Sum_probs=44.5
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCC-HHhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKIS-IAQLVQPIANGAFVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s-~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
..+|+..+|--|.++|..-.+.|.++++..-.+... ......+...|.++..+..| .++..+.++++.++
T Consensus 6 ~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 79 (246)
T 3osu_A 6 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQ 79 (246)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 567877778889999988888899988775432111 11123355678777666654 44555556655444
No 121
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=33.09 E-value=83 Score=30.35 Aligned_cols=70 Identities=16% Similarity=0.108 Sum_probs=42.2
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCC-CEEEEECCC---HHHHHHHHHHHHhc
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANG-AFVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~G-A~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
..+|+..+|--|.++|..-.+.|.+++++.-...........+...| .++..+..| .++..+.++++.++
T Consensus 43 ~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 116 (293)
T 3rih_A 43 SVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDA 116 (293)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHH
Confidence 56787777888999998878889987776533211111122344455 456555544 45556666666554
No 122
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=32.98 E-value=72 Score=29.69 Aligned_cols=70 Identities=10% Similarity=0.160 Sum_probs=43.0
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHh-HHhHHhCCCEEEEECCCH---HHHHHHHHHHHhc
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQ-LVQPIANGAFVLSLDTDF---DGCMQLIREVTSE 294 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~~GA~Vi~v~g~~---dd~~~~~~~~~~~ 294 (526)
..+|+..+|.-|.+++..-.+.|.+++++.-.+.....+ ...+...|.++..+..|. ++..+.++++.++
T Consensus 23 ~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 96 (274)
T 1ja9_A 23 VALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH 96 (274)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 578888888899999988788898877765422111111 233455687776666553 3444555544433
No 123
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=32.71 E-value=97 Score=29.37 Aligned_cols=69 Identities=10% Similarity=0.049 Sum_probs=41.8
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHh-HHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQ-LVQPIANGAFVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
..+|+..+|.-|.+++..-.+.|.+++++. .+.....+ ..++...|.++..+..| .++..+.++++.++
T Consensus 46 ~vlITGasggIG~~la~~L~~~G~~V~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 118 (285)
T 2c07_A 46 VALVTGAGRGIGREIAKMLAKSVSHVICIS-RTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTE 118 (285)
T ss_dssp EEEEESTTSHHHHHHHHHHTTTSSEEEEEE-SSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHcCCEEEEEc-CCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHh
Confidence 578888889999999988888898877743 21101111 22344567777666554 34445555554443
No 124
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=32.68 E-value=86 Score=29.37 Aligned_cols=70 Identities=16% Similarity=0.138 Sum_probs=44.0
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcC-CHHhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKI-SIAQLVQPIANGAFVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~-s~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
..+|+..+|--|.++|..-.+.|.+++++.-.+.. .......+...|.++..+..| .+++.+.++++.++
T Consensus 28 ~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 101 (267)
T 4iiu_A 28 SVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQ 101 (267)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 56787787888999998888899998776654311 112233455667666555544 44555555555443
No 125
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=32.64 E-value=76 Score=29.35 Aligned_cols=70 Identities=10% Similarity=0.170 Sum_probs=42.2
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHh-HHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQ-LVQPIANGAFVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
..+|+..||--|.++|..-.+.|.+++++.-.+.....+ ..++...|.++..+..| .++..+.++++.++
T Consensus 6 ~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (246)
T 2uvd_A 6 VALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDV 79 (246)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 567888888889999987788899877765422111111 22344567766655544 44455555555443
No 126
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=32.54 E-value=1.4e+02 Score=30.67 Aligned_cols=48 Identities=15% Similarity=0.095 Sum_probs=36.1
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEE
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLS 276 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~ 276 (526)
..+|...+|-.|.+...+|+..|.+++++.. ++.++..++.+||+.+.
T Consensus 231 ~VlV~GasG~vG~~avqlak~~Ga~vi~~~~----~~~~~~~~~~lGa~~vi 278 (456)
T 3krt_A 231 NVLIWGASGGLGSYATQFALAGGANPICVVS----SPQKAEICRAMGAEAII 278 (456)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEES----SHHHHHHHHHHTCCEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHcCCeEEEEEC----CHHHHHHHHhhCCcEEE
Confidence 3445455688899888899999998777763 35677888889997653
No 127
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=32.50 E-value=1.8e+02 Score=28.69 Aligned_cols=71 Identities=10% Similarity=0.015 Sum_probs=47.2
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcC-C------HHhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHh
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKI-S------IAQLVQPIANGAFVLSLDTD---FDGCMQLIREVTS 293 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~-s------~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~ 293 (526)
...+|+..+|--|.++|....+.|.+++++.-.... . ......+...|.++..+..| .+++.+.++++.+
T Consensus 46 k~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~ 125 (346)
T 3kvo_A 46 CTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAIK 125 (346)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 367888888888999998888889987777532210 0 12234466788888777654 4556666666655
Q ss_pred c
Q 009781 294 E 294 (526)
Q Consensus 294 ~ 294 (526)
+
T Consensus 126 ~ 126 (346)
T 3kvo_A 126 K 126 (346)
T ss_dssp H
T ss_pred H
Confidence 4
No 128
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=32.41 E-value=1.6e+02 Score=29.78 Aligned_cols=41 Identities=5% Similarity=0.056 Sum_probs=21.9
Q ss_pred HhcCCeeeccCCchhHHhHHHHHHHHHH-HHcCCCCCcEEEE
Q 009781 292 TSELPIYLANSLNSLRLEGQKTAAIEIL-QQFDWEVPDWVIV 332 (526)
Q Consensus 292 ~~~~~~~~~ns~Np~~i~G~~T~a~EI~-eQl~~~~pd~VvV 332 (526)
.++.+.+..++..-..+..-|....+++ ++.+-..|.+.++
T Consensus 101 l~~~gi~~~~~~~~~~~~~dK~~~k~~l~~~~gip~p~~~~~ 142 (433)
T 2dwc_A 101 FEKDGYFVVPNARATWIAMHRERLRETLVKEAKVPTSRYMYA 142 (433)
T ss_dssp HHHTTCCBSSCHHHHHHHHCHHHHHHHHHHTSCCCCCCEEEE
T ss_pred HHhcCCeeCCCHHHHHHhhCHHHHHHHHHHhcCCCCCCeeEe
Confidence 3444543334334456667777777776 6655324454443
No 129
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=32.35 E-value=2.6e+02 Score=27.00 Aligned_cols=50 Identities=16% Similarity=0.070 Sum_probs=36.1
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEE
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSL 277 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v 277 (526)
..|+..-.|-.|.....+|+..|...++.+-. ++.|+...+.+||..+.-
T Consensus 162 ~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~---~~~k~~~a~~lGa~~~i~ 211 (346)
T 4a2c_A 162 KNVIIIGAGTIGLLAIQCAVALGAKSVTAIDI---SSEKLALAKSFGAMQTFN 211 (346)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEEES---CHHHHHHHHHTTCSEEEE
T ss_pred CEEEEECCCCcchHHHHHHHHcCCcEEEEEec---hHHHHHHHHHcCCeEEEe
Confidence 34444445778888888999999998777643 456788889999976533
No 130
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=32.30 E-value=1.1e+02 Score=30.04 Aligned_cols=46 Identities=11% Similarity=-0.064 Sum_probs=33.9
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEE
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFV 274 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~V 274 (526)
...+|...+|..|.+++.+++..|.+++++ . ++.++..++.+|++.
T Consensus 152 ~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~----~~~~~~~~~~lGa~~ 197 (343)
T 3gaz_A 152 QTVLIQGGGGGVGHVAIQIALARGARVFAT-A----RGSDLEYVRDLGATP 197 (343)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEE-E----CHHHHHHHHHHTSEE
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEE-e----CHHHHHHHHHcCCCE
Confidence 345555547889999999999999976665 2 245677777889887
No 131
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=32.28 E-value=1.3e+02 Score=28.42 Aligned_cols=26 Identities=23% Similarity=0.203 Sum_probs=22.7
Q ss_pred EeccchHHHHHHHHHHhcCCCEEEEc
Q 009781 229 CASTGDTSAALSAYCASAGVPSIVFL 254 (526)
Q Consensus 229 ~aSSGN~g~AlAa~aa~~Gi~~~V~v 254 (526)
-.|||-.|.++|-++.+.|-+++++.
T Consensus 25 N~SSG~mG~aiA~~~~~~Ga~V~lv~ 50 (232)
T 2gk4_A 25 NHSTGHLGKIITETLLSAGYEVCLIT 50 (232)
T ss_dssp ECCCCHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 34489999999999999999988876
No 132
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=32.23 E-value=1.2e+02 Score=28.63 Aligned_cols=68 Identities=22% Similarity=0.162 Sum_probs=42.4
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCCH---HHHHHHHHHH
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDTDF---DGCMQLIREV 291 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~~---dd~~~~~~~~ 291 (526)
...+|+..+|--|.++|..-.+.|.+++++.-...........+...|.++..+..|. ++..+.++++
T Consensus 34 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~ 104 (275)
T 4imr_A 34 RTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERA 104 (275)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHH
Confidence 3577877778889999988888899877765322112223344566787776666543 3344444444
No 133
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=32.18 E-value=1.4e+02 Score=29.53 Aligned_cols=46 Identities=13% Similarity=0.031 Sum_probs=35.1
Q ss_pred chHHHHHHHHHHhc-CCCEEEEcCCCc-CCHHhHHhHHhCCCEEEEEC
Q 009781 233 GDTSAALSAYCASA-GVPSIVFLPANK-ISIAQLVQPIANGAFVLSLD 278 (526)
Q Consensus 233 GN~g~AlAa~aa~~-Gi~~~V~vP~~~-~s~~k~~q~~~~GA~Vi~v~ 278 (526)
+|.+.|+...++++ |++++++-|++- +++.-+..+...|+++...+
T Consensus 163 ~rva~Sl~~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~ 210 (306)
T 4ekn_B 163 GRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKE 210 (306)
T ss_dssp CHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEEES
T ss_pred CcHHHHHHHHHHhcCCCEEEEECCcccccCHHHHHHHHHcCCEEEEEc
Confidence 68899999999999 999999999873 33333344567788886554
No 134
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=32.01 E-value=84 Score=29.26 Aligned_cols=71 Identities=14% Similarity=0.047 Sum_probs=42.0
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
...+|+..+|--|.++|..-.+.|.+++++.-..........++...|.++..+..| .++..+.++++.++
T Consensus 15 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 88 (260)
T 2zat_A 15 KVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNL 88 (260)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 357888888888999998778889887766432100011122344567666555544 44455555555443
No 135
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=31.95 E-value=90 Score=28.86 Aligned_cols=70 Identities=13% Similarity=0.124 Sum_probs=42.6
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHh-HHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQ-LVQPIANGAFVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
..+|+..+|--|.+++..-.+.|.+++++.-.+.....+ ...+...|.++..+..| .++..+.++++.++
T Consensus 9 ~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (261)
T 1gee_A 9 VVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKE 82 (261)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 567888888889999977777898877665312111111 22344567777666655 34455555555443
No 136
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=31.92 E-value=17 Score=28.07 Aligned_cols=26 Identities=27% Similarity=0.520 Sum_probs=19.1
Q ss_pred ceeeccCCCCCCCCCcccCC-CceeeCC-CCC
Q 009781 80 SAKYVPFNAGPSCTESYSLD-EVVYRSQ-SGG 109 (526)
Q Consensus 80 ~~~y~s~~~t~~cg~~~~~~-~~~~~c~-cGG 109 (526)
.|.|+ |.+||.+++.+ ....+|+ ||.
T Consensus 26 ~v~Y~----C~~CG~~~e~~~~d~irCp~CG~ 53 (70)
T 1twf_L 26 TLKYI----CAECSSKLSLSRTDAVRCKDCGH 53 (70)
T ss_dssp CCCEE----CSSSCCEECCCTTSTTCCSSSCC
T ss_pred eEEEE----CCCCCCcceeCCCCCccCCCCCc
Confidence 47774 89999997774 2345895 898
No 137
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=31.54 E-value=86 Score=29.57 Aligned_cols=67 Identities=12% Similarity=0.188 Sum_probs=41.3
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHH----hH-HhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLV----QP-IANGAFVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~----q~-~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
...+|+..+|--|.++|..-.+.|.+++++.-. ..+.. ++ ...|.++..+..| .++..+.++++.++
T Consensus 22 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 96 (267)
T 1vl8_A 22 RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRN----LEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK 96 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 357888888899999998878889887766432 12221 22 3347666655544 44455555555443
No 138
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=31.32 E-value=1.1e+02 Score=29.45 Aligned_cols=71 Identities=14% Similarity=0.118 Sum_probs=45.2
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCC--------cCCHHhH----HhHHhCCCEEEEECCC---HHHHHHHH
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPAN--------KISIAQL----VQPIANGAFVLSLDTD---FDGCMQLI 288 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~--------~~s~~k~----~q~~~~GA~Vi~v~g~---~dd~~~~~ 288 (526)
...+|+..+|--|.++|..-++.|.+++++--.. ..+..++ .++...|.++..+..| .++..+.+
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 108 (299)
T 3t7c_A 29 KVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQAAV 108 (299)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHH
Confidence 3678888888889999988888899988764210 0012222 2345678777666654 45556666
Q ss_pred HHHHhc
Q 009781 289 REVTSE 294 (526)
Q Consensus 289 ~~~~~~ 294 (526)
+++.++
T Consensus 109 ~~~~~~ 114 (299)
T 3t7c_A 109 DDGVTQ 114 (299)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 665544
No 139
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=31.11 E-value=1.1e+02 Score=28.89 Aligned_cols=71 Identities=11% Similarity=0.095 Sum_probs=43.2
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCc--------CCHHhHH----hHHhCCCEEEEECCC---HHHHHHHH
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANK--------ISIAQLV----QPIANGAFVLSLDTD---FDGCMQLI 288 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~--------~s~~k~~----q~~~~GA~Vi~v~g~---~dd~~~~~ 288 (526)
...+|+..+|--|.++|..-.+.|.+++++--... ....++. .+...|.++..+..| .++..+.+
T Consensus 11 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~ 90 (287)
T 3pxx_A 11 KVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSREL 90 (287)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHH
Confidence 36788888888899999888888998777642200 0122222 244567777666554 44455555
Q ss_pred HHHHhc
Q 009781 289 REVTSE 294 (526)
Q Consensus 289 ~~~~~~ 294 (526)
+++.++
T Consensus 91 ~~~~~~ 96 (287)
T 3pxx_A 91 ANAVAE 96 (287)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555443
No 140
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=31.09 E-value=64 Score=30.38 Aligned_cols=70 Identities=19% Similarity=0.252 Sum_probs=41.1
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCH-HhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISI-AQLVQPIANGAFVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~-~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
..+|+..+|--|.++|..-.+.|.+++++.-...... .....+...|.++..+..| .++..+.++++.++
T Consensus 27 ~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 100 (269)
T 3gk3_A 27 VAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLAD 100 (269)
T ss_dssp EEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 5677777788899999888888998877653321111 1122334556655555443 44555555555443
No 141
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=30.75 E-value=94 Score=28.88 Aligned_cols=71 Identities=10% Similarity=0.046 Sum_probs=44.1
Q ss_pred ceEEEEecc--chHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHH-hCC-CEEEEEC-CCHHHHHHHHHHHHhcC
Q 009781 224 VIGVGCAST--GDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPI-ANG-AFVLSLD-TDFDGCMQLIREVTSEL 295 (526)
Q Consensus 224 ~~~Vv~aSS--GN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~-~~G-A~Vi~v~-g~~dd~~~~~~~~~~~~ 295 (526)
...+|+..+ |.-|.++|..-.+.|.+++++.-.. ....++.++. .+| +.++.+| .+.++..+.++++.++.
T Consensus 15 k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 90 (271)
T 3ek2_A 15 KRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGD-RFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHW 90 (271)
T ss_dssp CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSG-GGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHC
T ss_pred CEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecch-hhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHc
Confidence 356777755 7789999988888899887775432 2333444443 333 3444444 34566677777776654
No 142
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=30.61 E-value=1.1e+02 Score=28.81 Aligned_cols=71 Identities=11% Similarity=0.059 Sum_probs=45.1
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCc--------CCHHhH----HhHHhCCCEEEEECCC---HHHHHHHH
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANK--------ISIAQL----VQPIANGAFVLSLDTD---FDGCMQLI 288 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~--------~s~~k~----~q~~~~GA~Vi~v~g~---~dd~~~~~ 288 (526)
...+|+..+|--|.++|..-.+.|.+++++--... ....++ ..+...|.++..+..| .+++.+.+
T Consensus 11 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 90 (281)
T 3s55_A 11 KTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALESFV 90 (281)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence 36788888888899999888888998777653210 012222 2344678777666654 45566666
Q ss_pred HHHHhc
Q 009781 289 REVTSE 294 (526)
Q Consensus 289 ~~~~~~ 294 (526)
+++.++
T Consensus 91 ~~~~~~ 96 (281)
T 3s55_A 91 AEAEDT 96 (281)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 665544
No 143
>1yc5_A NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, SIRT1, nicotinamide, hydrolase; HET: ALY; 1.40A {Thermotoga maritima} SCOP: c.31.1.5 PDB: 2h2d_A* 2h2f_A 2h2g_A* 2h2h_A* 2h2i_A* 2h4f_A* 2h4j_A* 3d4b_A* 3d81_A* 3pdh_A* 2h4h_A* 3jr3_A* 2h59_A*
Probab=30.54 E-value=10 Score=36.42 Aligned_cols=29 Identities=14% Similarity=0.268 Sum_probs=20.2
Q ss_pred eeeccCCCCCCCCCcccCCC--------ceeeCC-CCCcce
Q 009781 81 AKYVPFNAGPSCTESYSLDE--------VVYRSQ-SGGLLD 112 (526)
Q Consensus 81 ~~y~s~~~t~~cg~~~~~~~--------~~~~c~-cGGll~ 112 (526)
+..+. |..|++.|+.++ ..-+|+ |||++.
T Consensus 119 ~~~~~---C~~C~~~~~~~~~~~~~~~~~~p~C~~Cgg~lr 156 (246)
T 1yc5_A 119 VEEYY---CVRCEKKYTVEDVIKKLESSDVPLCDDCNSLIR 156 (246)
T ss_dssp EEEEE---ETTTCCEEEHHHHHHHTTTCSSCBCTTTCCBEE
T ss_pred cceeE---cCCCCCCCcHHHHHHHhccCCCCCCCCCCCccC
Confidence 55566 889999887532 245785 999874
No 144
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=30.42 E-value=1.3e+02 Score=29.22 Aligned_cols=47 Identities=19% Similarity=0.128 Sum_probs=34.2
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEE
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVL 275 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi 275 (526)
..+|...+|..|.+++..++..|.+++++.. ++.++..++.+|++.+
T Consensus 151 ~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~----~~~~~~~~~~~ga~~~ 197 (334)
T 3qwb_A 151 YVLLFAAAGGVGLILNQLLKMKGAHTIAVAS----TDEKLKIAKEYGAEYL 197 (334)
T ss_dssp EEEESSTTBHHHHHHHHHHHHTTCEEEEEES----SHHHHHHHHHTTCSEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHcCCcEE
Confidence 4455454788999999999999997666544 3457777788898755
No 145
>2apo_B Ribosome biogenesis protein NOP10; protein-protein complex, box H/ACA, snoRNP, pseudouridine synthase, RNA modification; 1.95A {Methanocaldococcus jannaschii} SCOP: g.41.16.1 PDB: 2aqc_A
Probab=30.33 E-value=28 Score=26.09 Aligned_cols=24 Identities=25% Similarity=0.440 Sum_probs=17.0
Q ss_pred CCCCCCCcccCCCceeeCC-CCCcceecc
Q 009781 88 AGPSCTESYSLDEVVYRSQ-SGGLLDVQH 115 (526)
Q Consensus 88 ~t~~cg~~~~~~~~~~~c~-cGGll~v~~ 115 (526)
+|+.|| .|++.+ .|| ||+...+++
T Consensus 8 ~C~~Cg-vYTLk~---~CP~CG~~T~~~h 32 (60)
T 2apo_B 8 KCPKCG-LYTLKE---ICPKCGEKTVIPK 32 (60)
T ss_dssp ECTTTC-CEESSS---BCSSSCSBCBCCC
T ss_pred eCCCCC-CEeccc---cCcCCCCcCCCCC
Confidence 488995 466633 586 899987665
No 146
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=30.13 E-value=1e+02 Score=28.15 Aligned_cols=70 Identities=13% Similarity=0.139 Sum_probs=42.4
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHh-HHhHHhCCCEEEEECCCH---HHHHHHHHHHHhc
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQ-LVQPIANGAFVLSLDTDF---DGCMQLIREVTSE 294 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~~GA~Vi~v~g~~---dd~~~~~~~~~~~ 294 (526)
..+|+..+|--|.+++..-.+.|.++++++-.+.....+ ..++...|.++..+..|. ++..+.++++.++
T Consensus 3 ~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 76 (244)
T 1edo_A 3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDA 76 (244)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 467778888889999988888899887754332111111 123445577776666553 4445555555443
No 147
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=30.06 E-value=82 Score=29.57 Aligned_cols=71 Identities=20% Similarity=0.085 Sum_probs=41.8
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCC-CEEEEECCC---HHHHHHHHHHHHhc
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANG-AFVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~G-A~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
...+|+..+|--|.++|..-.+.|.+++++.-.......-...+...| .++..+..| .+++.+.++++.++
T Consensus 11 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 85 (262)
T 3pk0_A 11 RSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEE 85 (262)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 356777777888999998888889987766432100011122344455 566555543 45566666666554
No 148
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=30.03 E-value=1.1e+02 Score=28.46 Aligned_cols=70 Identities=10% Similarity=-0.002 Sum_probs=41.9
Q ss_pred ceEEEEeccch--HHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHH-hCC---CEEEEEC-CCHHHHHHHHHHHHhc
Q 009781 224 VIGVGCASTGD--TSAALSAYCASAGVPSIVFLPANKISIAQLVQPI-ANG---AFVLSLD-TDFDGCMQLIREVTSE 294 (526)
Q Consensus 224 ~~~Vv~aSSGN--~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~-~~G---A~Vi~v~-g~~dd~~~~~~~~~~~ 294 (526)
...+|+..+|. -|.++|..-.+.|.+++++.-.. .......++. .++ +.++.+| .+.++..+.++++.++
T Consensus 8 k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (266)
T 3oig_A 8 RNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGE-RLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQ 84 (266)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG-GGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred CEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCch-HHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence 35788888777 89999987788899877765332 1223333333 333 3444444 2345566666666554
No 149
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=29.95 E-value=1.4e+02 Score=28.07 Aligned_cols=68 Identities=12% Similarity=0.189 Sum_probs=40.1
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHh-HHhHHhCC--CEEEEECCC---HHHHHHHHHHHHh
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQ-LVQPIANG--AFVLSLDTD---FDGCMQLIREVTS 293 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~~G--A~Vi~v~g~---~dd~~~~~~~~~~ 293 (526)
..+|+..+|.-|.+++....+.|.+++++.-.. ....+ ..++...| .++..+..| .++..+.++++.+
T Consensus 34 ~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 107 (279)
T 1xg5_A 34 LALVTGASGGIGAAVARALVQQGLKVVGCARTV-GNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRS 107 (279)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEECCh-HHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence 678888889999999988788898877765321 01111 12334444 456555544 3444444544433
No 150
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=29.93 E-value=78 Score=29.26 Aligned_cols=31 Identities=3% Similarity=-0.075 Sum_probs=23.5
Q ss_pred ceEEEEeccchHHHHHHHHHHh-cCCCEEEEc
Q 009781 224 VIGVGCASTGDTSAALSAYCAS-AGVPSIVFL 254 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~-~Gi~~~V~v 254 (526)
...+|+..+|--|.+++..-.. .|.+++++.
T Consensus 5 k~vlITGasggIG~~~a~~L~~~~g~~V~~~~ 36 (276)
T 1wma_A 5 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTA 36 (276)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEe
Confidence 3568888888889999866666 888766664
No 151
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=29.85 E-value=2.1e+02 Score=26.23 Aligned_cols=66 Identities=15% Similarity=0.056 Sum_probs=42.5
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHH-hCCCEEEEEC-CCHHHHHHHHHHHHhc
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPI-ANGAFVLSLD-TDFDGCMQLIREVTSE 294 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~-~~GA~Vi~v~-g~~dd~~~~~~~~~~~ 294 (526)
..+|+..+|--|.+++..-.+.|.+++++.- +..++..+. ..|+.++.+| .+.++..+.++++.++
T Consensus 7 ~vlVTGas~giG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 74 (245)
T 1uls_A 7 AVLITGAAHGIGRATLELFAKEGARLVACDI----EEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAH 74 (245)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHH
Confidence 5788888899999999877888998777642 223333332 3476666665 3455555566655443
No 152
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=29.82 E-value=1.7e+02 Score=27.04 Aligned_cols=68 Identities=15% Similarity=0.050 Sum_probs=42.7
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
..+|+..+|.-|.+++..-.+.|.+++++.-. ....-...+...|.++..+..| .++..+.++++.++
T Consensus 9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (249)
T 2ew8_A 9 LAVITGGANGIGRAIAERFAVEGADIAIADLV--PAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVIST 79 (249)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESS--CCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCC--chhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence 57888888999999998878889887766422 1111112455677777666554 44455555555443
No 153
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=29.67 E-value=2e+02 Score=27.04 Aligned_cols=71 Identities=14% Similarity=0.047 Sum_probs=45.2
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCc-C-----CHH-hHHhHHhCCCEEEEECCC---HHHHHHHHHHHHh
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANK-I-----SIA-QLVQPIANGAFVLSLDTD---FDGCMQLIREVTS 293 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~-~-----s~~-k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~ 293 (526)
...+|+..+|--|.++|..-.+.|.+++++.-... . ... ....+...|.++..+..| .++..+.++++.+
T Consensus 7 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 86 (274)
T 3e03_A 7 KTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAATVD 86 (274)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 36788888888899999888888998777653211 0 011 122344568888766654 4556666666655
Q ss_pred c
Q 009781 294 E 294 (526)
Q Consensus 294 ~ 294 (526)
+
T Consensus 87 ~ 87 (274)
T 3e03_A 87 T 87 (274)
T ss_dssp H
T ss_pred H
Confidence 4
No 154
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=29.60 E-value=21 Score=32.33 Aligned_cols=21 Identities=24% Similarity=0.267 Sum_probs=16.5
Q ss_pred CCCCCCcccCCCceeeCC-CCCc
Q 009781 89 GPSCTESYSLDEVVYRSQ-SGGL 110 (526)
Q Consensus 89 t~~cg~~~~~~~~~~~c~-cGGl 110 (526)
|+.||..|. .++.-.|| ||.+
T Consensus 141 C~~CG~i~~-~~~p~~CP~Cg~~ 162 (170)
T 3pwf_A 141 CPICGYTAV-DEAPEYCPVCGAP 162 (170)
T ss_dssp CTTTCCEEE-SCCCSBCTTTCCB
T ss_pred eCCCCCeeC-CCCCCCCCCCCCC
Confidence 999999998 45555897 8865
No 155
>1q1a_A HST2 protein; ternary complex, histone deacetylase, 2'-O-ADP ribose,, gene regulation; HET: ALY OAD; 1.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 PDB: 1szd_A* 1szc_A* 2od7_A* 2od9_A* 2qqf_A* 2qqg_A* 1q17_A* 2od2_A*
Probab=29.49 E-value=12 Score=36.98 Aligned_cols=29 Identities=14% Similarity=0.201 Sum_probs=20.0
Q ss_pred eeeccCCCCCCCCCcccCCC-----------ceeeCC-CCCcce
Q 009781 81 AKYVPFNAGPSCTESYSLDE-----------VVYRSQ-SGGLLD 112 (526)
Q Consensus 81 ~~y~s~~~t~~cg~~~~~~~-----------~~~~c~-cGGll~ 112 (526)
+..+. |..|++.|+.++ .+-+|+ |||++.
T Consensus 134 ~~~~~---C~~C~~~~~~~~~~~~~~~~~~~~~P~C~~Cgg~lr 174 (289)
T 1q1a_A 134 FAHCH---CIGCGKVYPPQVFKSKLAEHPIKDFVKCDVCGELVK 174 (289)
T ss_dssp EEEEE---ETTTCCEECHHHHHHHHTCSSCCSCCBCTTTCCBEE
T ss_pred cCceE---ECCCCCCCcHHHHHHHHhhccCCCCccCCCCCCEEC
Confidence 55566 888999887422 234785 999874
No 156
>1ma3_A SIR2-AF2, transcriptional regulatory protein, SIR2 family; enzyme-substrate complex, protein binding, transcription; HET: ALY MES; 2.00A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1s7g_A* 1yc2_A*
Probab=29.46 E-value=19 Score=34.62 Aligned_cols=29 Identities=21% Similarity=0.447 Sum_probs=20.2
Q ss_pred eeeccCCCCCCCCCcccCCCc--------eeeCC-CCC-cce
Q 009781 81 AKYVPFNAGPSCTESYSLDEV--------VYRSQ-SGG-LLD 112 (526)
Q Consensus 81 ~~y~s~~~t~~cg~~~~~~~~--------~~~c~-cGG-ll~ 112 (526)
+..+. |..|+..|+.++. +-+|+ ||| ++.
T Consensus 121 ~~~~~---C~~C~~~~~~~~~~~~~~~~~~p~C~~Cgg~~lr 159 (253)
T 1ma3_A 121 MDKLD---CLDCHETYDWSEFVEDFNKGEIPRCRKCGSYYVK 159 (253)
T ss_dssp EEEEE---ETTTCCEEEGGGTHHHHHTTCCCCCTTTCCSCEE
T ss_pred cCeee---eCCCCCcCcHHHHHHHhccCCCCCCCCCCCcccc
Confidence 55566 8899998876432 34785 999 764
No 157
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=29.37 E-value=2.5e+02 Score=27.36 Aligned_cols=49 Identities=10% Similarity=-0.041 Sum_probs=34.2
Q ss_pred CceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEE
Q 009781 223 PVIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVL 275 (526)
Q Consensus 223 ~~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi 275 (526)
+...+|...+|..|.+++..++..|.+++++... +.++..++.+|++.+
T Consensus 170 g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~----~~~~~~~~~~g~~~~ 218 (347)
T 2hcy_A 170 GHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGG----EGKEELFRSIGGEVF 218 (347)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECS----TTHHHHHHHTTCCEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCC----HHHHHHHHHcCCceE
Confidence 3456777777889999999999999877666543 224455667787543
No 158
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=29.34 E-value=1e+02 Score=30.74 Aligned_cols=46 Identities=13% Similarity=-0.009 Sum_probs=34.1
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEE
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVL 275 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi 275 (526)
..+|...+|..|.++..+|+..|.+++++. ++.++..++.+||+.+
T Consensus 167 ~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-----~~~~~~~~~~lGa~~v 212 (371)
T 3gqv_A 167 YVLVYGGSTATATVTMQMLRLSGYIPIATC-----SPHNFDLAKSRGAEEV 212 (371)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEE-----CGGGHHHHHHTTCSEE
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEe-----CHHHHHHHHHcCCcEE
Confidence 455556668899999999999999876653 2346777888998654
No 159
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=29.33 E-value=29 Score=26.32 Aligned_cols=27 Identities=19% Similarity=0.293 Sum_probs=20.8
Q ss_pred CCCCCCCCcccCCCceeeCCCCCcceecc
Q 009781 87 NAGPSCTESYSLDEVVYRSQSGGLLDVQH 115 (526)
Q Consensus 87 ~~t~~cg~~~~~~~~~~~c~cGGll~v~~ 115 (526)
++|..|++.+.+- .+.|.||+.|=..+
T Consensus 16 ~rC~~C~kkvgl~--~f~CrCg~~FC~~H 42 (64)
T 1wfh_A 16 NRCTVCRKRVGLT--GFMCRCGTTFCGSH 42 (64)
T ss_dssp CCCTTTCCCCCTT--CEECSSSCEECTTT
T ss_pred CcChhhCCccCcc--CEEeecCCEecccc
Confidence 5688999988753 68999999885443
No 160
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=29.33 E-value=1.1e+02 Score=29.00 Aligned_cols=65 Identities=12% Similarity=0.098 Sum_probs=39.1
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHH----hHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLV----QPIANGAFVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~----q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
..+|+..+|--|.++|..-.+.|.+++++.-. ..+.. ++...| ++..+..| .++..+.++++.++
T Consensus 31 ~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~----~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~ 102 (276)
T 2b4q_A 31 IALVTGGSRGIGQMIAQGLLEAGARVFICARD----AEACADTATRLSAYG-DCQAIPADLSSEAGARRLAQALGEL 102 (276)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEECSC----HHHHHHHHHHHTTSS-CEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHhcC-ceEEEEeeCCCHHHHHHHHHHHHHh
Confidence 57888888999999998878889887665322 22222 222344 55555544 34444555554443
No 161
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=28.96 E-value=66 Score=30.78 Aligned_cols=66 Identities=15% Similarity=0.092 Sum_probs=42.0
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHH----hHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLV----QPIANGAFVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~----q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
..+|+..+|--|.++|..-.+.|.+++++.-. ..++. ++...|.++..+..| .++..+.++++.++
T Consensus 10 ~vlVTGas~GIG~aia~~la~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 82 (280)
T 3tox_A 10 IAIVTGASSGIGRAAALLFAREGAKVVVTARN----GNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRR 82 (280)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEECCSC----HHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEECC----HHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 56787777888999998778889886554322 22222 233467777777655 44555566655544
No 162
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=28.89 E-value=1.5e+02 Score=27.48 Aligned_cols=68 Identities=13% Similarity=0.017 Sum_probs=37.5
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
...+|+..+|--|.++|..-.+.|.+++++.-.. ....+. ....|.++..+..| .++..+.++++.++
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~--~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 78 (257)
T 3tpc_A 8 RVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKP-PAGEEP--AAELGAAVRFRNADVTNEADATAALAFAKQE 78 (257)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSC-C--------------CEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCh-HHHHHH--HHHhCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 3678888888889999988888899877765322 111111 12235555444433 45556666665544
No 163
>1uc8_A LYSX, lysine biosynthesis enzyme; alpha-aminoadipate pathway, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.00A {Thermus thermophilus} SCOP: c.30.1.6 d.142.1.7 PDB: 1uc9_A*
Probab=28.75 E-value=2.5e+02 Score=25.91 Aligned_cols=102 Identities=14% Similarity=0.059 Sum_probs=55.9
Q ss_pred EEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHh--HHhCCCEEEEEC--CCHHHHHHHHHHHHhcCCeeeccC
Q 009781 227 VGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQ--PIANGAFVLSLD--TDFDGCMQLIREVTSELPIYLANS 302 (526)
Q Consensus 227 Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q--~~~~GA~Vi~v~--g~~dd~~~~~~~~~~~~~~~~~ns 302 (526)
|+....+.++..++..+++.|++++++-+.. ... ++.. ......+++.+. +++. ...+.+..++.+.-+.|+
T Consensus 4 il~~~~~~~~~~~~~a~~~~G~~v~~~~~~~-~~~-~~~~~~~~~~~~d~~~~~~~~~~~--~~~~~~~l~~~g~~~~~~ 79 (280)
T 1uc8_A 4 ILYDRIRPDERMLFERAEALGLPYKKVYVPA-LPM-VLGERPKELEGVTVALERCVSQSR--GLAAARYLTALGIPVVNR 79 (280)
T ss_dssp EEESSCCHHHHHHHHHHHHHTCCEEEEEGGG-CCE-ETTBCCGGGTTCCEEEECCSSHHH--HHHHHHHHHHTTCCEESC
T ss_pred EEecCCCHHHHHHHHHHHHcCCcEEEEehhh-cee-eccCCCcccCCCCEEEECCccchh--hHHHHHHHHHCCCceeCC
Confidence 4444445668888989999999999887654 221 1100 001234523333 3332 123334445555444454
Q ss_pred CchhHHhHHHHHHHHHHHHcCCCCCcEEEE
Q 009781 303 LNSLRLEGQKTAAIEILQQFDWEVPDWVIV 332 (526)
Q Consensus 303 ~Np~~i~G~~T~a~EI~eQl~~~~pd~VvV 332 (526)
.....+...|....+++++.+-..|.++++
T Consensus 80 ~~~~~~~~dK~~~~~~l~~~gi~~p~~~~~ 109 (280)
T 1uc8_A 80 PEVIEACGDKWATSVALAKAGLPQPKTALA 109 (280)
T ss_dssp HHHHHHHHBHHHHHHHHHHTTCCCCCEEEE
T ss_pred HHHHHHhCCHHHHHHHHHHcCcCCCCeEee
Confidence 344456667777888888765434555544
No 164
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=28.61 E-value=1.1e+02 Score=28.88 Aligned_cols=71 Identities=11% Similarity=0.054 Sum_probs=43.5
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCC--------cCCHHhHH----hHHhCCCEEEEECCC---HHHHHHHH
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPAN--------KISIAQLV----QPIANGAFVLSLDTD---FDGCMQLI 288 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~--------~~s~~k~~----q~~~~GA~Vi~v~g~---~dd~~~~~ 288 (526)
...+|+..+|--|.++|..-.+.|.+++++--.. .....++. .+...|.++..+..| .++..+.+
T Consensus 14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~ 93 (278)
T 3sx2_A 14 KVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSAAL 93 (278)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence 3678888888889999988888899987764220 00122222 234557777666554 44455555
Q ss_pred HHHHhc
Q 009781 289 REVTSE 294 (526)
Q Consensus 289 ~~~~~~ 294 (526)
+++.++
T Consensus 94 ~~~~~~ 99 (278)
T 3sx2_A 94 QAGLDE 99 (278)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555444
No 165
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=28.60 E-value=1.4e+02 Score=28.06 Aligned_cols=69 Identities=12% Similarity=-0.041 Sum_probs=43.0
Q ss_pred eEEEEeccch--HHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCC--CEEEEEC-CCHHHHHHHHHHHHhcC
Q 009781 225 IGVGCASTGD--TSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANG--AFVLSLD-TDFDGCMQLIREVTSEL 295 (526)
Q Consensus 225 ~~Vv~aSSGN--~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~G--A~Vi~v~-g~~dd~~~~~~~~~~~~ 295 (526)
..+|+.-+|+ -|.++|..-.+.|.+++++.-.. ....+.++...+ +.++.+| .+.++..+.++++.++.
T Consensus 28 ~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 101 (280)
T 3nrc_A 28 KILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVW 101 (280)
T ss_dssp EEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred EEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHc
Confidence 5677776666 89999977788898877665432 334555555433 3444444 34556666676665543
No 166
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=28.52 E-value=1.3e+02 Score=28.41 Aligned_cols=71 Identities=13% Similarity=0.012 Sum_probs=43.5
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCC---------cCCHHhHH----hHHhCCCEEEEECCC---HHHHHHH
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPAN---------KISIAQLV----QPIANGAFVLSLDTD---FDGCMQL 287 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~---------~~s~~k~~----q~~~~GA~Vi~v~g~---~dd~~~~ 287 (526)
...+|+..+|--|.++|..-.+.|.+++++--.. ..+..++. ++...|.++..+..| .+++.+.
T Consensus 16 k~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~ 95 (280)
T 3pgx_A 16 RVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALREL 95 (280)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence 3678888888889999988888899888764210 01222322 234567777665544 4455555
Q ss_pred HHHHHhc
Q 009781 288 IREVTSE 294 (526)
Q Consensus 288 ~~~~~~~ 294 (526)
++++.++
T Consensus 96 ~~~~~~~ 102 (280)
T 3pgx_A 96 VADGMEQ 102 (280)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555443
No 167
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=28.51 E-value=52 Score=29.12 Aligned_cols=28 Identities=18% Similarity=0.035 Sum_probs=23.4
Q ss_pred EEEEeccchHHHHHHHHHHhcCCCEEEEc
Q 009781 226 GVGCASTGDTSAALSAYCASAGVPSIVFL 254 (526)
Q Consensus 226 ~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~v 254 (526)
.+|+ -.|=+|.++|.+.++.|++++||=
T Consensus 5 V~II-GaGpaGL~aA~~La~~G~~V~v~E 32 (336)
T 3kkj_A 5 IAII-GTGIAGLSAAQALTAAGHQVHLFD 32 (336)
T ss_dssp EEEE-CCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred EEEE-CcCHHHHHHHHHHHHCCCCEEEEE
Confidence 3444 459999999999999999999885
No 168
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=28.51 E-value=1.7e+02 Score=27.88 Aligned_cols=54 Identities=19% Similarity=0.135 Sum_probs=35.7
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEEC
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLD 278 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~ 278 (526)
+.+|+..||..|.+++......|.+++++.=........+..+...|++++..+
T Consensus 13 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~D 66 (318)
T 2r6j_A 13 KILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGE 66 (318)
T ss_dssp CEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECC
T ss_pred eEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEec
Confidence 468888889999999877777898888776332112222333455687775544
No 169
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=28.48 E-value=2.1e+02 Score=27.20 Aligned_cols=68 Identities=15% Similarity=-0.064 Sum_probs=43.7
Q ss_pred HHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCC-eeec--cCCchhHHhHHHHHHHHHHHHcCCCCCcEEEEeCCc
Q 009781 264 LVQPIANGAFVLSLDTDFDGCMQLIREVTSELP-IYLA--NSLNSLRLEGQKTAAIEILQQFDWEVPDWVIVPGGN 336 (526)
Q Consensus 264 ~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~-~~~~--ns~Np~~i~G~~T~a~EI~eQl~~~~pd~VvVP~G~ 336 (526)
-..+...|++|+.++-+.+...+.++++.+..+ .... +-.++ +..+.+.-++.++++ .+|.+|--.|.
T Consensus 26 a~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~---~~v~~~~~~~~~~~G--~iDiLVNNAG~ 96 (255)
T 4g81_D 26 AEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDE---LAIEAAFSKLDAEGI--HVDILINNAGI 96 (255)
T ss_dssp HHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCH---HHHHHHHHHHHHTTC--CCCEEEECCCC
T ss_pred HHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCH---HHHHHHHHHHHHHCC--CCcEEEECCCC
Confidence 345667899999998887777777777755432 2222 22233 334456667777776 68988877653
No 170
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=28.45 E-value=4.2e+02 Score=26.15 Aligned_cols=49 Identities=24% Similarity=0.354 Sum_probs=34.2
Q ss_pred EeccchH--HHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCCHH
Q 009781 229 CASTGDT--SAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDTDFD 282 (526)
Q Consensus 229 ~aSSGN~--g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~~d 282 (526)
..|.|+. -.+||..-++.|.+++|+.+.. -...+...|.+.+.++++.+
T Consensus 8 ~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~-----~~~~v~~~g~~~~~l~~~~~ 58 (404)
T 3h4t_A 8 CGSRGDTEPLVALAARLRELGADARMCLPPD-----YVERCAEVGVPMVPVGRAVR 58 (404)
T ss_dssp ESSHHHHHHHHHHHHHHHHTTCCEEEEECGG-----GHHHHHHTTCCEEECSSCSS
T ss_pred CCCCccHHHHHHHHHHHHHCCCeEEEEeCHH-----HHHHHHHcCCceeecCCCHH
Confidence 3455554 4666777778899999988753 12345678999999987754
No 171
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=28.37 E-value=1.6e+02 Score=28.46 Aligned_cols=48 Identities=10% Similarity=-0.029 Sum_probs=34.0
Q ss_pred CceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEE
Q 009781 223 PVIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFV 274 (526)
Q Consensus 223 ~~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~V 274 (526)
+...+|+..+|..|.+++..++..|.+++++.. ++.++..++.+|+..
T Consensus 146 g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~----~~~~~~~~~~~g~~~ 193 (333)
T 1v3u_A 146 GETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAG----SDEKIAYLKQIGFDA 193 (333)
T ss_dssp SCEEEEESTTBHHHHHHHHHHHHTTCEEEEEES----SHHHHHHHHHTTCSE
T ss_pred CCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHhcCCcE
Confidence 345677777789999999999999987665543 344555566778754
No 172
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=28.14 E-value=2e+02 Score=26.36 Aligned_cols=70 Identities=16% Similarity=0.167 Sum_probs=44.3
Q ss_pred HhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCC---eeeccCCchhHHhHHHHHHHHHHHHcCCCCCcEEEEeCCc
Q 009781 262 AQLVQPIANGAFVLSLDTDFDGCMQLIREVTSELP---IYLANSLNSLRLEGQKTAAIEILQQFDWEVPDWVIVPGGN 336 (526)
Q Consensus 262 ~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~---~~~~ns~Np~~i~G~~T~a~EI~eQl~~~~pd~VvVP~G~ 336 (526)
.-..++...|++|+.++-+.+...+..+++.+..+ ++..+-.|+ +....+.-++.++.+ .+|.+|...|.
T Consensus 24 ~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~~~~~~~g--~id~li~~Ag~ 96 (253)
T 3qiv_A 24 AYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDP---ESAKAMADRTLAEFG--GIDYLVNNAAI 96 (253)
T ss_dssp HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSH---HHHHHHHHHHHHHHS--CCCEEEECCCC
T ss_pred HHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCH---HHHHHHHHHHHHHcC--CCCEEEECCCc
Confidence 33445667899999998887777777666654332 222332343 233445566777776 68999888775
No 173
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=28.08 E-value=2e+02 Score=26.34 Aligned_cols=67 Identities=9% Similarity=0.016 Sum_probs=40.1
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHh
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDTD---FDGCMQLIREVTS 293 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~ 293 (526)
...+|+..+|.-|.+++..-.+.|.+++++.-.. ....+.. ...|.++..+..| .++..+.++++.+
T Consensus 13 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~-~~~~~~~--~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (265)
T 2o23_A 13 LVAVITGGASGLGLATAERLVGQGASAVLLDLPN-SGGEAQA--KKLGNNCVFAPADVTSEKDVQTALALAKG 82 (265)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTT-SSHHHHH--HHHCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCc-HhHHHHH--HHhCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 3678888889999999977778899877765332 1222221 2225555555444 4445555555443
No 174
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=27.98 E-value=1.3e+02 Score=28.43 Aligned_cols=71 Identities=8% Similarity=0.081 Sum_probs=44.9
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCC------------cCCHHhHH----hHHhCCCEEEEECCC---HHHH
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPAN------------KISIAQLV----QPIANGAFVLSLDTD---FDGC 284 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~------------~~s~~k~~----q~~~~GA~Vi~v~g~---~dd~ 284 (526)
...+|+..+|--|.++|..-.+.|.+++++--.. .....++. ++...|.++..+..| .++.
T Consensus 12 k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 91 (286)
T 3uve_A 12 KVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYDAL 91 (286)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHHHH
Confidence 3678888888889999988888899987763210 01133333 234567777666544 4556
Q ss_pred HHHHHHHHhc
Q 009781 285 MQLIREVTSE 294 (526)
Q Consensus 285 ~~~~~~~~~~ 294 (526)
.+.++++.++
T Consensus 92 ~~~~~~~~~~ 101 (286)
T 3uve_A 92 KAAVDSGVEQ 101 (286)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6666665554
No 175
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=27.82 E-value=1.3e+02 Score=28.60 Aligned_cols=69 Identities=12% Similarity=0.103 Sum_probs=41.3
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHh-HHhHHh-CCCEEEEECCC---HHHHHHHHHHHHhc
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQ-LVQPIA-NGAFVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~-~GA~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
..+|+..+|--|.+++..-.+.|.+++++.-... ...+ ...+.. +|.++..+..| .++..+.++++.++
T Consensus 28 ~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 101 (302)
T 1w6u_A 28 VAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMD-VLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV 101 (302)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH-HHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence 5788888899999999888888988776643210 1111 112222 26666556554 44555566555444
No 176
>3glr_A NAD-dependent deacetylase sirtuin-3, mitochondria; NAD dependent deacetylase, sirtuin, substrate peptide comple hydrolase, metal-binding; HET: ALY; 1.80A {Homo sapiens} PDB: 3gls_A 3glt_A* 3glu_A 4hd8_A* 4fvt_A*
Probab=27.60 E-value=20 Score=35.40 Aligned_cols=29 Identities=14% Similarity=0.279 Sum_probs=20.4
Q ss_pred eeeccCCCCCCCCCcccCCC--------ceeeCC-CCCcce
Q 009781 81 AKYVPFNAGPSCTESYSLDE--------VVYRSQ-SGGLLD 112 (526)
Q Consensus 81 ~~y~s~~~t~~cg~~~~~~~--------~~~~c~-cGGll~ 112 (526)
+..+. |..|++.|+.++ .+-+|+ |||++.
T Consensus 137 ~~~~~---C~~C~~~~~~~~~~~~i~~~~~P~C~~Cgg~lr 174 (285)
T 3glr_A 137 FASAT---CTVCQRPFPGEDIRADVMADRVPRCPVCTGVVK 174 (285)
T ss_dssp EEEEE---ETTTCCEEEGGGGHHHHHTTCCCBCTTTCCBEE
T ss_pred CCeEE---ECCCCCcCCHHHHHHHhhcCCCCCCCCCCCccC
Confidence 55566 889999887542 234685 999874
No 177
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=27.57 E-value=1.1e+02 Score=28.60 Aligned_cols=66 Identities=14% Similarity=0.028 Sum_probs=40.6
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHH----hHHhC--CCEEEEECCC---HHHHHHHHHHHHhc
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLV----QPIAN--GAFVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~----q~~~~--GA~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
..+|+..+|--|.++|..-.+.|.+++++.-. ..+.. ++... |.++..+..| .++..+.++++.++
T Consensus 15 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 89 (267)
T 1iy8_A 15 VVLITGGGSGLGRATAVRLAAEGAKLSLVDVS----SEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER 89 (267)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 57888888899999998777889887766422 22222 22222 6666555544 44455555555443
No 178
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=27.50 E-value=1.7e+02 Score=25.90 Aligned_cols=30 Identities=10% Similarity=0.018 Sum_probs=25.2
Q ss_pred EEEEeccchHHHHHHHHHHhcCCCEEEEcC
Q 009781 226 GVGCASTGDTSAALSAYCASAGVPSIVFLP 255 (526)
Q Consensus 226 ~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP 255 (526)
.+|+..||..|.+++......|.+++++.-
T Consensus 3 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R 32 (221)
T 3ew7_A 3 IGIIGATGRAGSRILEEAKNRGHEVTAIVR 32 (221)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEcCCchhHHHHHHHHHhCCCEEEEEEc
Confidence 578888899999999888888988887764
No 179
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=27.49 E-value=1.6e+02 Score=27.40 Aligned_cols=68 Identities=12% Similarity=0.032 Sum_probs=42.4
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhH-HhCCCEEEEECC---CHHHHHHHHHHHHhcC
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQP-IANGAFVLSLDT---DFDGCMQLIREVTSEL 295 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~-~~~GA~Vi~v~g---~~dd~~~~~~~~~~~~ 295 (526)
...+|+..+|--|.++|..-.+.|.+++++--. ..+..+. ..++.++..+.. +.+++.+.++++.++.
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 80 (259)
T 4e6p_A 9 KSALITGSARGIGRAFAEAYVREGATVAIADID----IERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHA 80 (259)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHc
Confidence 367888888888999998878889987766422 2233322 233555544443 3555666666665554
No 180
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=27.34 E-value=1.2e+02 Score=28.27 Aligned_cols=66 Identities=20% Similarity=0.251 Sum_probs=40.4
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHH----hHHhC-CCEEEEECCC---HHHHHHHHHHHHhc
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLV----QPIAN-GAFVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~----q~~~~-GA~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
..+|+..+|--|.+++..-.+.|.+++++.-. ..+.. ++... |.++..+..| .++..+.++++.++
T Consensus 9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (263)
T 3ai3_A 9 VAVITGSSSGIGLAIAEGFAKEGAHIVLVARQ----VDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSS 82 (263)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEcCC----HHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 57888888999999998778889887766422 22222 22222 6666555544 44455555555443
No 181
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=27.25 E-value=1.1e+02 Score=29.31 Aligned_cols=71 Identities=6% Similarity=-0.019 Sum_probs=41.3
Q ss_pred ceEEEEeccch--HHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECC---CHHHHHHHHHHHHhcC
Q 009781 224 VIGVGCASTGD--TSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDT---DFDGCMQLIREVTSEL 295 (526)
Q Consensus 224 ~~~Vv~aSSGN--~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g---~~dd~~~~~~~~~~~~ 295 (526)
...+|+..+|. -|.++|..-.+.|.+++++.-.. ........+...+.++..+.. +.++..+.++++.++.
T Consensus 32 k~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (293)
T 3grk_A 32 KRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGD-ALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKW 107 (293)
T ss_dssp CEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSH-HHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCH-HHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence 35788887777 89999988888899877664321 111222333322223444443 4556666676666554
No 182
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=27.20 E-value=1.7e+02 Score=26.64 Aligned_cols=66 Identities=17% Similarity=0.124 Sum_probs=40.0
Q ss_pred eEEEEeccchHHHHHHHHHHhcCC-------CEEEEcCCCcCCHHhHH----hHHhCCCEEEEECCCH---HHHHHHHHH
Q 009781 225 IGVGCASTGDTSAALSAYCASAGV-------PSIVFLPANKISIAQLV----QPIANGAFVLSLDTDF---DGCMQLIRE 290 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi-------~~~V~vP~~~~s~~k~~----q~~~~GA~Vi~v~g~~---dd~~~~~~~ 290 (526)
..+|+..+|--|.+++..-.+.|. +++++.-. ..+.. .+...|.++..+..|. ++..+.+++
T Consensus 4 ~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 79 (244)
T 2bd0_A 4 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRT----AADLEKISLECRAEGALTDTITADISDMADVRRLTTH 79 (244)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESC----HHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCC----HHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHH
Confidence 568888888899999977777787 55544322 22222 2344577776666553 344455555
Q ss_pred HHhc
Q 009781 291 VTSE 294 (526)
Q Consensus 291 ~~~~ 294 (526)
+.++
T Consensus 80 ~~~~ 83 (244)
T 2bd0_A 80 IVER 83 (244)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 5443
No 183
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=27.12 E-value=34 Score=25.94 Aligned_cols=27 Identities=19% Similarity=0.362 Sum_probs=20.7
Q ss_pred CCCCCCCCcccCCCceeeCCCCCcceecc
Q 009781 87 NAGPSCTESYSLDEVVYRSQSGGLLDVQH 115 (526)
Q Consensus 87 ~~t~~cg~~~~~~~~~~~c~cGGll~v~~ 115 (526)
++|..|++.+.+ ..+.|.||+.|=..+
T Consensus 16 ~rC~~C~kkvgl--~~f~CrCg~~FC~~H 42 (64)
T 1wg2_A 16 NRCFSCNKKVGV--MGFKCKCGSTFCGSH 42 (64)
T ss_dssp CSCTTTCCCCTT--SCEECTTSCEECSSS
T ss_pred CcChhhCCcccc--cCeEeecCCEecccC
Confidence 568899998775 368999999885443
No 184
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=26.95 E-value=1.4e+02 Score=27.97 Aligned_cols=71 Identities=15% Similarity=0.105 Sum_probs=43.5
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCC---------CcCCHHhHH----hHHhCCCEEEEECCC---HHHHHHH
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPA---------NKISIAQLV----QPIANGAFVLSLDTD---FDGCMQL 287 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~---------~~~s~~k~~----q~~~~GA~Vi~v~g~---~dd~~~~ 287 (526)
...+|+..+|--|.++|..-.+.|.+++++--. ...+..++. .+...|.++..+..| .++..+.
T Consensus 12 k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~ 91 (277)
T 3tsc_A 12 RVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLRKV 91 (277)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred CEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence 367888888888999998888889988876321 001222322 234567777666544 4455555
Q ss_pred HHHHHhc
Q 009781 288 IREVTSE 294 (526)
Q Consensus 288 ~~~~~~~ 294 (526)
++++.++
T Consensus 92 ~~~~~~~ 98 (277)
T 3tsc_A 92 VDDGVAA 98 (277)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555443
No 185
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=26.93 E-value=2e+02 Score=27.28 Aligned_cols=66 Identities=12% Similarity=0.049 Sum_probs=43.7
Q ss_pred HhHHhCCCEEEEECCCHHHHHHHHHHHHhcCC---eeeccCCchhHHhHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 009781 265 VQPIANGAFVLSLDTDFDGCMQLIREVTSELP---IYLANSLNSLRLEGQKTAAIEILQQFDWEVPDWVIVPGG 335 (526)
Q Consensus 265 ~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~---~~~~ns~Np~~i~G~~T~a~EI~eQl~~~~pd~VvVP~G 335 (526)
..+...|++|+.++-+.+.+.+.++++.+..+ .+..+-.++. ....+.-++.++++ .+|.+|--.|
T Consensus 25 ~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~---~v~~~~~~~~~~~G--~iDiLVNNAG 93 (254)
T 4fn4_A 25 KKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKK---DVEEFVRRTFETYS--RIDVLCNNAG 93 (254)
T ss_dssp HHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHH---HHHHHHHHHHHHHS--CCCEEEECCC
T ss_pred HHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHH---HHHHHHHHHHHHcC--CCCEEEECCc
Confidence 34567899999998888777777777654322 2223333443 34556677788887 6898887776
No 186
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=26.92 E-value=2.1e+02 Score=26.55 Aligned_cols=83 Identities=18% Similarity=0.070 Sum_probs=47.6
Q ss_pred CEEEEcCC-CcCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCC---eeeccCCchhHHhHHHHHHHHHHHHcCC
Q 009781 249 PSIVFLPA-NKISIAQLVQPIANGAFVLSLDTDFDGCMQLIREVTSELP---IYLANSLNSLRLEGQKTAAIEILQQFDW 324 (526)
Q Consensus 249 ~~~V~vP~-~~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~---~~~~ns~Np~~i~G~~T~a~EI~eQl~~ 324 (526)
+.+++.-. +.+-..-..++...|++|+.++-+.+...+..+++.+..+ ++..+-.++ +....+.-++.++.+
T Consensus 30 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~v~~~~~~~~~~~g- 105 (262)
T 3rkr_A 30 QVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHS---DAIAAFATGVLAAHG- 105 (262)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCH---HHHHHHHHHHHHHHS-
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCH---HHHHHHHHHHHHhcC-
Confidence 34555543 2233333445667899999888777766666666544322 222222233 333445556667766
Q ss_pred CCCcEEEEeCCc
Q 009781 325 EVPDWVIVPGGN 336 (526)
Q Consensus 325 ~~pd~VvVP~G~ 336 (526)
.+|.||..+|.
T Consensus 106 -~id~lv~~Ag~ 116 (262)
T 3rkr_A 106 -RCDVLVNNAGV 116 (262)
T ss_dssp -CCSEEEECCCC
T ss_pred -CCCEEEECCCc
Confidence 68988888775
No 187
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=26.84 E-value=1.1e+02 Score=28.77 Aligned_cols=67 Identities=12% Similarity=0.104 Sum_probs=40.1
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHH-hHHhCCCEEEEECCC---HHHHHHHHHHHH
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLV-QPIANGAFVLSLDTD---FDGCMQLIREVT 292 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~-q~~~~GA~Vi~v~g~---~dd~~~~~~~~~ 292 (526)
..+|+..+|.-|.+++..-...|.+++++.-.. ....+.. .+..+|.++..+..| .++..+.++++.
T Consensus 36 ~vlITGasggIG~~la~~L~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 106 (279)
T 3ctm_A 36 VASVTGSSGGIGWAVAEAYAQAGADVAIWYNSH-PADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQE 106 (279)
T ss_dssp EEEETTTTSSHHHHHHHHHHHHTCEEEEEESSS-CCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHH
Confidence 567888888889999977777898877765332 1222222 233456666555554 344444454443
No 188
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=26.79 E-value=1.4e+02 Score=28.27 Aligned_cols=69 Identities=9% Similarity=0.068 Sum_probs=41.7
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHh-HHhHHh-----CCCEEEEECCC---HHHHHHHHHHHHhc
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQ-LVQPIA-----NGAFVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~-----~GA~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
..+|+..+|--|.+++..-.+.|.+++++.-.. ....+ ..++.. .|.++..+..| .++..+.++++.++
T Consensus 20 ~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 97 (303)
T 1yxm_A 20 VAIVTGGATGIGKAIVKELLELGSNVVIASRKL-ERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDT 97 (303)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHHH
Confidence 578888889999999988888898876664221 01111 122333 46677666655 44455555555443
No 189
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=26.79 E-value=1.2e+02 Score=28.92 Aligned_cols=70 Identities=11% Similarity=-0.004 Sum_probs=44.3
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCc-CCHHh-HHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANK-ISIAQ-LVQPIANGAFVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~-~s~~k-~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
..+|+..+|--|.++|..-.+.|.+++++.-... ....+ ...+...|.++..+..| .++..+.++++.++
T Consensus 51 ~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 125 (294)
T 3r3s_A 51 KALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREA 125 (294)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 6788888888899999888888998777653210 01111 12345678888777765 34455555555443
No 190
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=26.71 E-value=1.4e+02 Score=28.02 Aligned_cols=67 Identities=13% Similarity=0.117 Sum_probs=42.6
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEEC-CCHHHHHHHHHHHHhc
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLD-TDFDGCMQLIREVTSE 294 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~-g~~dd~~~~~~~~~~~ 294 (526)
...+|+..+|--|.++|..-.+.|.+++++.- +..++..+....+..+.+| .+.++..+.++++.++
T Consensus 17 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 84 (266)
T 3p19_A 17 KLVVITGASSGIGEAIARRFSEEGHPLLLLAR----RVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEKI 84 (266)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCCEEEEES----CHHHHHTTCCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHhhcCCceEEEecCCCHHHHHHHHHHHHHH
Confidence 36788888888899999888888998877643 2334433322344445454 3455666666666554
No 191
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=26.60 E-value=1.6e+02 Score=28.58 Aligned_cols=49 Identities=8% Similarity=-0.117 Sum_probs=34.7
Q ss_pred CceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhH-HhCCCEEE
Q 009781 223 PVIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQP-IANGAFVL 275 (526)
Q Consensus 223 ~~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~-~~~GA~Vi 275 (526)
+...+|...+|..|.+++.+++..|.+++++.. ++.++..+ +.+|++.+
T Consensus 150 g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~----~~~~~~~~~~~~g~~~~ 199 (336)
T 4b7c_A 150 GETVVISGAAGAVGSVAGQIARLKGCRVVGIAG----GAEKCRFLVEELGFDGA 199 (336)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES----SHHHHHHHHHTTCCSEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHcCCCEE
Confidence 335566666688999999999999997666543 34566666 77888644
No 192
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=26.52 E-value=1.3e+02 Score=27.99 Aligned_cols=30 Identities=10% Similarity=0.077 Sum_probs=23.5
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEc
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFL 254 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~v 254 (526)
..+|+..+|--|.++|..-.+.|.+++++.
T Consensus 7 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 36 (260)
T 2qq5_A 7 VCVVTGASRGIGRGIALQLCKAGATVYITG 36 (260)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEe
Confidence 567888888889999977777898766653
No 193
>3iz6_A 40S ribosomal protein SA (S2P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=26.32 E-value=73 Score=31.56 Aligned_cols=84 Identities=5% Similarity=-0.050 Sum_probs=51.7
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCeeeccC-CchhHHhHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHHHHH
Q 009781 270 NGAFVLSLDTDFDGCMQLIREVTSELPIYLANS-LNSLRLEGQKTAAIEILQQFDWEVPDWVIVPGGNLGNIYAFYKGFQ 348 (526)
Q Consensus 270 ~GA~Vi~v~g~~dd~~~~~~~~~~~~~~~~~ns-~Np~~i~G~~T~a~EI~eQl~~~~pd~VvVP~G~Gg~l~G~~kgf~ 348 (526)
.|++|+.|.. ....++.+++.++..+.++++. +-|..+-.+.+.. .+.||.+||-- --..-.+ ++
T Consensus 74 ~~~~ILfVgT-k~~aq~aV~k~A~~tG~~yV~~RWlgGtLTN~~t~~--------f~ePdllvV~D-p~~d~qA----I~ 139 (305)
T 3iz6_A 74 NPQDIIVQSA-RPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTS--------FSEPRLLILTD-PRTDHQP----IK 139 (305)
T ss_dssp SSCCEEEECC-SHHHHHHHHHHHHHHTCEEECSCCCTTTTTTTTTSC--------SSCCSEEEESC-TTTTHHH----HH
T ss_pred CCCeEEEEeC-cHHHHHHHHHHHHHhCCccccCcccCCcccCccccc--------ccCCceeEEeC-cccchHH----HH
Confidence 4566666643 3456777888877777666664 4444444444422 24799888753 2333333 34
Q ss_pred HHHHcCCCCCCCeEEEEecCCCch
Q 009781 349 MCKELGLVDRIPRLVCAQAANANP 372 (526)
Q Consensus 349 ~l~~~Gl~~~~prvi~Vq~~~~~~ 372 (526)
|+.++|+ .+|++..++|++
T Consensus 140 EA~~lnI-----PtIALvDTnsdp 158 (305)
T 3iz6_A 140 ESALGNI-----PTIAFCDTDSPM 158 (305)
T ss_dssp HHHHHTC-----CEEEEECTTSCG
T ss_pred HHHHcCC-----CEEEEEcCCCCc
Confidence 8888886 378888888775
No 194
>1q14_A HST2 protein; histone deacetylase, hydrolase; 2.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5
Probab=26.18 E-value=16 Score=37.39 Aligned_cols=29 Identities=14% Similarity=0.201 Sum_probs=20.0
Q ss_pred eeeccCCCCCCCCCcccCCC-----------ceeeCC-CCCcce
Q 009781 81 AKYVPFNAGPSCTESYSLDE-----------VVYRSQ-SGGLLD 112 (526)
Q Consensus 81 ~~y~s~~~t~~cg~~~~~~~-----------~~~~c~-cGGll~ 112 (526)
+..+. |..|++.|+.++ .+-+|+ |||++.
T Consensus 142 l~~~~---C~~C~~~~~~~~~~~~~~~~~~~~~P~Cp~Cgg~lr 182 (361)
T 1q14_A 142 FAHCH---CIGCGKVYPPQVFKSKLAEHPIKDFVKCDVCGELVK 182 (361)
T ss_dssp EEEEE---ETTTCCEECTHHHHHHTTSSSCSCCCBCTTTCCBEE
T ss_pred ccccC---cCCCCccCcHHHHHHHHhhcccCCCCCCcCCCCEeC
Confidence 55666 889999887522 124785 999874
No 195
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Probab=26.13 E-value=2e+02 Score=30.91 Aligned_cols=69 Identities=12% Similarity=0.095 Sum_probs=48.0
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCCH-HHHHHHHHHHHhcC
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDTDF-DGCMQLIREVTSEL 295 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~~-dd~~~~~~~~~~~~ 295 (526)
..||+..++--|.++|..-++.|.++++.--.. ...-..++...|.+++.+..|. ++..++++++.++.
T Consensus 324 valVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~ 393 (604)
T 2et6_A 324 VVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKY 393 (604)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHH
T ss_pred eEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhc
Confidence 467777777779999988888899877653221 2223345667788988888888 77777777665543
No 196
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=26.08 E-value=73 Score=30.21 Aligned_cols=69 Identities=12% Similarity=-0.013 Sum_probs=39.0
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHh-HHhHHhCCCEEEEECC---CHHHHHHHHHHHHhc
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQ-LVQPIANGAFVLSLDT---DFDGCMQLIREVTSE 294 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~~GA~Vi~v~g---~~dd~~~~~~~~~~~ 294 (526)
..+|+..+|--|.++|..-.+.|.+++++.-.. ....+ ...+...|.++..+.. +.++..+.++++.++
T Consensus 30 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 102 (270)
T 3ftp_A 30 VAIVTGASRGIGRAIALELARRGAMVIGTATTE-AGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKE 102 (270)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSH-HHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHH
Confidence 567777777889999977778898877664321 11111 1223344554444433 344555555555443
No 197
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=25.80 E-value=35 Score=26.64 Aligned_cols=27 Identities=15% Similarity=0.317 Sum_probs=21.2
Q ss_pred CCCCCCCCcccCCCceeeCCCCCcceecc
Q 009781 87 NAGPSCTESYSLDEVVYRSQSGGLLDVQH 115 (526)
Q Consensus 87 ~~t~~cg~~~~~~~~~~~c~cGGll~v~~ 115 (526)
++|..|++.+.+- .+.|.||+.|=..+
T Consensus 26 ~RC~~C~kkvgL~--~f~CrCg~~FCs~H 52 (74)
T 1wfp_A 26 TRCLSCNKKVGVT--GFKCRCGSTFCGTH 52 (74)
T ss_dssp CBCSSSCCBCTTT--CEECTTSCEECTTT
T ss_pred ccchhhcCccccc--ceEeccCCEecccc
Confidence 5688999988863 68999999985444
No 198
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=25.72 E-value=80 Score=28.82 Aligned_cols=68 Identities=12% Similarity=0.095 Sum_probs=39.7
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHh-HHhHH-hCCCEEEEECCC---HHHHHHHHHHHHh
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQ-LVQPI-ANGAFVLSLDTD---FDGCMQLIREVTS 293 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~-~~GA~Vi~v~g~---~dd~~~~~~~~~~ 293 (526)
..+|+..+|.-|.++|..-.+.|.++++..-.. ....+ ..++. ..|.++..+..| .++..+.++++.+
T Consensus 4 ~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 76 (235)
T 3l77_A 4 VAVITGASRGIGEAIARALARDGYALALGARSV-DRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLE 76 (235)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHH
Confidence 568888888899999988888898866654321 11111 11222 457777666554 3444444444433
No 199
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=25.52 E-value=1.3e+02 Score=29.25 Aligned_cols=47 Identities=19% Similarity=0.155 Sum_probs=33.6
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEE
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVL 275 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi 275 (526)
..+|...+|..|.+++..++..|.+++++.. ++.++..++.+|++.+
T Consensus 143 ~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~----~~~~~~~~~~~Ga~~~ 189 (325)
T 3jyn_A 143 IILFHAAAGGVGSLACQWAKALGAKLIGTVS----SPEKAAHAKALGAWET 189 (325)
T ss_dssp EEEESSTTSHHHHHHHHHHHHHTCEEEEEES----SHHHHHHHHHHTCSEE
T ss_pred EEEEEcCCcHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHcCCCEE
Confidence 4445454788999999999999997666543 3456777777888654
No 200
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=25.36 E-value=2.8e+02 Score=25.61 Aligned_cols=66 Identities=12% Similarity=0.138 Sum_probs=40.0
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHH-hC--CCEEEEEC-CCHHHHHHHHHHHHhc
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPI-AN--GAFVLSLD-TDFDGCMQLIREVTSE 294 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~-~~--GA~Vi~v~-g~~dd~~~~~~~~~~~ 294 (526)
..+|+..+|--|.+++..-.+.|.+++++.- +..+...+. .. ++..+.+| .+.++..+.++++.++
T Consensus 14 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~ 83 (263)
T 3ak4_A 14 KAIVTGGSKGIGAAIARALDKAGATVAIADL----DVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDA 83 (263)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHH
Confidence 5788888899999999888888988766532 222333322 22 44445444 2345555555555443
No 201
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=25.17 E-value=1.5e+02 Score=28.66 Aligned_cols=69 Identities=14% Similarity=0.093 Sum_probs=46.4
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhH-HhCCCEEEEECC---CHHHHHHHHHHHHhcCC
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQP-IANGAFVLSLDT---DFDGCMQLIREVTSELP 296 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~-~~~GA~Vi~v~g---~~dd~~~~~~~~~~~~~ 296 (526)
...||+..++--|.++|..-++.|.++++.-= +..++.+. ..+|.+++.+.. +.+++.++++++.++.+
T Consensus 30 KvalVTGas~GIG~aiA~~la~~Ga~V~i~~r----~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 102 (273)
T 4fgs_A 30 KIAVITGATSGIGLAAAKRFVAEGARVFITGR----RKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAG 102 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 46788888888899999888889998776532 23344433 345666555543 46677777777766644
No 202
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=25.11 E-value=1.8e+02 Score=26.86 Aligned_cols=68 Identities=16% Similarity=0.132 Sum_probs=41.1
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHh----HHhC---CCEEEEEC---CCHHHHHHHHHHHHh
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQ----PIAN---GAFVLSLD---TDFDGCMQLIREVTS 293 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q----~~~~---GA~Vi~v~---g~~dd~~~~~~~~~~ 293 (526)
...+|+..+|--|.++|..-.+.|.+++++.-. ..++.. +... .+..+.++ .+.+++.+.++++.+
T Consensus 13 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (252)
T 3f1l_A 13 RIILVTGASDGIGREAAMTYARYGATVILLGRN----EEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAV 88 (252)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHH
Confidence 367888888888999997777889987766432 222222 2222 34555555 345556666666655
Q ss_pred cC
Q 009781 294 EL 295 (526)
Q Consensus 294 ~~ 295 (526)
+.
T Consensus 89 ~~ 90 (252)
T 3f1l_A 89 NY 90 (252)
T ss_dssp HC
T ss_pred hC
Confidence 43
No 203
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=25.00 E-value=1.6e+02 Score=27.34 Aligned_cols=68 Identities=18% Similarity=0.066 Sum_probs=40.6
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHH----hHHhC--CCEEEEECCC---HHHHHHHHHHHHhcC
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLV----QPIAN--GAFVLSLDTD---FDGCMQLIREVTSEL 295 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~----q~~~~--GA~Vi~v~g~---~dd~~~~~~~~~~~~ 295 (526)
..+|+..+|--|.+++..-.+.|.+++++.-. ..+.. ++... |.++..+..| .++..+.++++.++.
T Consensus 9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (260)
T 2z1n_A 9 LAVVTAGSSGLGFASALELARNGARLLLFSRN----REKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLG 84 (260)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhc
Confidence 57888888999999997777889887766422 22222 22221 3355444443 445556666665544
Q ss_pred C
Q 009781 296 P 296 (526)
Q Consensus 296 ~ 296 (526)
+
T Consensus 85 g 85 (260)
T 2z1n_A 85 G 85 (260)
T ss_dssp C
T ss_pred C
Confidence 3
No 204
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=24.99 E-value=80 Score=29.74 Aligned_cols=69 Identities=16% Similarity=0.052 Sum_probs=40.5
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHh-HHhHHh-CCCEEEEECCC---HHHHHHHHHHHHhc
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQ-LVQPIA-NGAFVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~-~GA~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
..+|+..+|--|.++|..-.+.|.+++++.-.. ....+ ...+.. .|.++..+..| .+++.+.++++.++
T Consensus 22 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 95 (266)
T 4egf_A 22 RALITGATKGIGADIARAFAAAGARLVLSGRDV-SELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEA 95 (266)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 567777778889999987788898876654321 11111 112222 57666656544 44555555555444
No 205
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=24.65 E-value=2.1e+02 Score=27.02 Aligned_cols=71 Identities=17% Similarity=0.079 Sum_probs=43.8
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHh-HHhHHh-CCCEEEEECCC---HHHHHHHHHHHHhcC
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQ-LVQPIA-NGAFVLSLDTD---FDGCMQLIREVTSEL 295 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~-~GA~Vi~v~g~---~dd~~~~~~~~~~~~ 295 (526)
..+|+..+|--|.++|..-.+.|.+++++.-.......+ ...+.. .+.++..+..| .++..+.++++.++.
T Consensus 27 ~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 102 (281)
T 3v2h_A 27 TAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRF 102 (281)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHT
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHC
Confidence 578888888889999988888898877664322101111 112333 36777777655 455666666665554
No 206
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=24.58 E-value=1.1e+02 Score=28.02 Aligned_cols=65 Identities=12% Similarity=0.079 Sum_probs=39.2
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHh----H-HhCCCEEEEECCC---HHHHHHHHHHHHh
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQ----P-IANGAFVLSLDTD---FDGCMQLIREVTS 293 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q----~-~~~GA~Vi~v~g~---~dd~~~~~~~~~~ 293 (526)
..+|+..+|.-|.+++..-.+.|.+++++.-. ..+... + ...|.++..+..| .++..+.++++.+
T Consensus 4 ~vlItGasggiG~~~a~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 76 (250)
T 2cfc_A 4 VAIVTGASSGNGLAIATRFLARGDRVAALDLS----AETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATME 76 (250)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 56888888999999998888889886666432 122221 2 2345555555544 4444555555443
No 207
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=24.32 E-value=1.6e+02 Score=27.25 Aligned_cols=67 Identities=10% Similarity=0.058 Sum_probs=41.6
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhH-HhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQP-IANGAFVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~-~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
...+|+..+|--|.++|..-.+.|.+++++-- +..++..+ ..++.++..+..| .+++.+.++++.++
T Consensus 10 k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (261)
T 3n74_A 10 KVALITGAGSGFGEGMAKRFAKGGAKVVIVDR----DKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSK 80 (261)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcC----CHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence 36788888888899999888888988666532 22233332 2346555555443 45556666665544
No 208
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=24.21 E-value=3.4e+02 Score=26.72 Aligned_cols=46 Identities=15% Similarity=0.031 Sum_probs=34.4
Q ss_pred chHHHHHHHHHHhcCCCEEEEcCCCcCCHH-hHHhHHhCCCEEEEEC
Q 009781 233 GDTSAALSAYCASAGVPSIVFLPANKISIA-QLVQPIANGAFVLSLD 278 (526)
Q Consensus 233 GN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~-k~~q~~~~GA~Vi~v~ 278 (526)
+|.+.|+...++++|++++++-|++-.++. -...++..|+++...+
T Consensus 167 ~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~ 213 (308)
T 1ml4_A 167 GRTVHSLAEALTFYDVELYLISPELLRMPRHIVEELREKGMKVVETT 213 (308)
T ss_dssp CHHHHHHHHHGGGSCEEEEEECCGGGCCCHHHHHHHHHTTCCEEEES
T ss_pred CchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHcCCeEEEEc
Confidence 578999999999999999999998732332 2344557788876554
No 209
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=24.07 E-value=1.5e+02 Score=29.25 Aligned_cols=45 Identities=18% Similarity=-0.015 Sum_probs=33.5
Q ss_pred chHHHHHHHHHHhc-CCCEEEEcCCCcCCHHh-HHhHHhCCCEEEEE
Q 009781 233 GDTSAALSAYCASA-GVPSIVFLPANKISIAQ-LVQPIANGAFVLSL 277 (526)
Q Consensus 233 GN~g~AlAa~aa~~-Gi~~~V~vP~~~~s~~k-~~q~~~~GA~Vi~v 277 (526)
+|.+.|+...++++ |++++++-|++-.++.. +..++..|+++...
T Consensus 166 ~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~ 212 (310)
T 3csu_A 166 GRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLH 212 (310)
T ss_dssp CHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEEC
T ss_pred CchHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHcCCeEEEE
Confidence 58899999999999 99999999987323322 34455678876544
No 210
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=23.91 E-value=3.5e+02 Score=25.16 Aligned_cols=70 Identities=13% Similarity=0.149 Sum_probs=42.8
Q ss_pred eEEEEecc--chHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHh-CC-CEEEEEC-CCHHHHHHHHHHHHhcC
Q 009781 225 IGVGCAST--GDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIA-NG-AFVLSLD-TDFDGCMQLIREVTSEL 295 (526)
Q Consensus 225 ~~Vv~aSS--GN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~-~G-A~Vi~v~-g~~dd~~~~~~~~~~~~ 295 (526)
..+|+..+ |--|.++|..-.+.|.+++++.-... ....+.++.. .| +.++.+| .+.++..+.++++.++.
T Consensus 8 ~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 82 (275)
T 2pd4_A 8 KGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL 82 (275)
T ss_dssp EEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 56777776 78899999888888998777653321 2223444433 34 4445555 34555666666665544
No 211
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=23.89 E-value=1.2e+02 Score=28.16 Aligned_cols=67 Identities=13% Similarity=0.127 Sum_probs=38.8
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHH-hCC--CEEEEEC-CCHHHHHHHHHHHHhc
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPI-ANG--AFVLSLD-TDFDGCMQLIREVTSE 294 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~-~~G--A~Vi~v~-g~~dd~~~~~~~~~~~ 294 (526)
...+|+..+|--|.++|..-.+.|.+++++.-. ..+...+. ..+ +..+.+| .+.++..+.++++.++
T Consensus 10 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 80 (248)
T 3op4_A 10 KVALVTGASRGIGKAIAELLAERGAKVIGTATS----ESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDE 80 (248)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESS----HHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHH
Confidence 356787777888999998778889887766432 22222221 223 2334444 2355556666655544
No 212
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=23.89 E-value=3e+02 Score=25.81 Aligned_cols=85 Identities=14% Similarity=-0.015 Sum_probs=46.6
Q ss_pred CEEEEcCCC-cCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCC-eeeccCCchhHHhHHHHHHHHHHHHcCCCC
Q 009781 249 PSIVFLPAN-KISIAQLVQPIANGAFVLSLDTDFDGCMQLIREVTSELP-IYLANSLNSLRLEGQKTAAIEILQQFDWEV 326 (526)
Q Consensus 249 ~~~V~vP~~-~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~-~~~~ns~Np~~i~G~~T~a~EI~eQl~~~~ 326 (526)
+.+++.-.+ .+-..-..++...|++|+.++-+.+...+.++++.+... ...+. .|..-.+....+.-++.++.+ .
T Consensus 27 k~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~-~Dv~d~~~v~~~~~~~~~~~g--~ 103 (271)
T 4ibo_A 27 RTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVA-FDVTSESEIIEAFARLDEQGI--D 103 (271)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECC-CCTTCHHHHHHHHHHHHHHTC--C
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEE-cCCCCHHHHHHHHHHHHHHCC--C
Confidence 455555432 233333445667899998888777666666666643322 22221 122122233445556666666 5
Q ss_pred CcEEEEeCCc
Q 009781 327 PDWVIVPGGN 336 (526)
Q Consensus 327 pd~VvVP~G~ 336 (526)
+|.+|--.|.
T Consensus 104 iD~lv~nAg~ 113 (271)
T 4ibo_A 104 VDILVNNAGI 113 (271)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8888877763
No 213
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=23.86 E-value=1.5e+02 Score=27.21 Aligned_cols=66 Identities=11% Similarity=-0.018 Sum_probs=38.4
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHH-hCCCEEEEECC---CHHHHHHHHHHHHhc
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPI-ANGAFVLSLDT---DFDGCMQLIREVTSE 294 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~-~~GA~Vi~v~g---~~dd~~~~~~~~~~~ 294 (526)
..+|+..+|--|.++|..-.+.|.+++++--. ..++.++. ..+..+..+.. +.++..+.++++.++
T Consensus 5 ~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 74 (235)
T 3l6e_A 5 HIIVTGAGSGLGRALTIGLVERGHQVSMMGRR----YQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEW 74 (235)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECC----HHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHh
Confidence 57888888888999998777889886665322 22332221 12323433433 345555555555443
No 214
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=23.76 E-value=1.5e+02 Score=27.45 Aligned_cols=68 Identities=15% Similarity=-0.046 Sum_probs=39.4
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCC---HHHHHHHHHHHH
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDTD---FDGCMQLIREVT 292 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~ 292 (526)
..+|+..+|--|.+++..-.+.|.+++++.-...........+...|.++..+..| .++..+.++++.
T Consensus 16 ~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 86 (266)
T 1xq1_A 16 TVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVS 86 (266)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHH
Confidence 56787888888999998777889887766432100011122344557666555544 334444454443
No 215
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=23.56 E-value=74 Score=30.38 Aligned_cols=31 Identities=16% Similarity=0.038 Sum_probs=0.0
Q ss_pred CCceEEEEeccchHHHHHHHHHHhcCCCEEEE
Q 009781 222 KPVIGVGCASTGDTSAALSAYCASAGVPSIVF 253 (526)
Q Consensus 222 ~~~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~ 253 (526)
+.++.+|..+ |-+|.+.|.++++.|++++||
T Consensus 5 ~~yDVvIIGa-GpAGlsAA~~lar~g~~v~li 35 (304)
T 4fk1_A 5 KYIDCAVIGA-GPAGLNASLVLGRARKQIALF 35 (304)
T ss_dssp -CEEEEEECC-SHHHHHHHHHHHHTTCCEEEE
T ss_pred CCcCEEEECC-CHHHHHHHHHHHHCCCCEEEE
No 216
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=23.46 E-value=1.2e+02 Score=29.09 Aligned_cols=70 Identities=11% Similarity=0.046 Sum_probs=40.7
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCC---EEEEECCC---HHHHHHHHHHHHhc
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGA---FVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA---~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
..+|+..+|--|.++|..-.+.|.+++++.-.......-..++...|. ++..+..| .++..+.++++.++
T Consensus 28 ~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 103 (297)
T 1xhl_A 28 SVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK 103 (297)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHh
Confidence 578888888889999977778899877664321000111123444555 55555444 44555556555443
No 217
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=23.23 E-value=1.6e+02 Score=28.64 Aligned_cols=70 Identities=17% Similarity=0.140 Sum_probs=42.1
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHh-HHhHHhCCC--EEEEECCC---HHHHHHHHHHHHhcC
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQ-LVQPIANGA--FVLSLDTD---FDGCMQLIREVTSEL 295 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~~GA--~Vi~v~g~---~dd~~~~~~~~~~~~ 295 (526)
..+|+..||--|.++|..-...|.++++..-.. ....+ ...+...|. ++..+..| .++..+.++++.++.
T Consensus 10 ~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (319)
T 3ioy_A 10 TAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQ-DSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF 85 (319)
T ss_dssp EEEEETTTSTHHHHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred EEEEcCCchHHHHHHHHHHHHCCCEEEEEECCH-HHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence 678888888899999988788899877665332 11111 122333443 55555443 455566666665543
No 218
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=23.20 E-value=1.4e+02 Score=28.17 Aligned_cols=70 Identities=11% Similarity=0.087 Sum_probs=41.5
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhH-HhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQP-IANGAFVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~-~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
..+|+..+|--|.++|..-.+.|.+++++.-...........+ ...|.++..+..| .+++.+.++++.++
T Consensus 29 ~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 102 (277)
T 4fc7_A 29 VAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKE 102 (277)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 5788888888899999877788988776643210001111122 2346666666544 44555666665544
No 219
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=23.15 E-value=1.4e+02 Score=28.91 Aligned_cols=70 Identities=11% Similarity=0.106 Sum_probs=44.4
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCC--------cCCHHhHH----hHHhCCCEEEEECCC---HHHHHHHHH
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPAN--------KISIAQLV----QPIANGAFVLSLDTD---FDGCMQLIR 289 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~--------~~s~~k~~----q~~~~GA~Vi~v~g~---~dd~~~~~~ 289 (526)
..+|+..+|--|.++|..-.+.|.+++++--.. ..+..++. .+...|.++..+..| .++..+.++
T Consensus 48 ~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 127 (317)
T 3oec_A 48 VAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQAVVD 127 (317)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHH
Confidence 578888888889999988888899988773210 01122332 244678777766654 455566666
Q ss_pred HHHhc
Q 009781 290 EVTSE 294 (526)
Q Consensus 290 ~~~~~ 294 (526)
++.++
T Consensus 128 ~~~~~ 132 (317)
T 3oec_A 128 EALAE 132 (317)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65544
No 220
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=22.97 E-value=2.4e+02 Score=23.16 Aligned_cols=47 Identities=13% Similarity=-0.018 Sum_probs=32.8
Q ss_pred EEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEEE
Q 009781 226 GVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSL 277 (526)
Q Consensus 226 ~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v 277 (526)
.+++.. |..|.+++......|.+++++-. ++.+...+...|..++..
T Consensus 9 v~I~G~-G~iG~~la~~L~~~g~~V~~id~----~~~~~~~~~~~~~~~~~g 55 (141)
T 3llv_A 9 YIVIGS-EAAGVGLVRELTAAGKKVLAVDK----SKEKIELLEDEGFDAVIA 55 (141)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEEES----CHHHHHHHHHTTCEEEEC
T ss_pred EEEECC-CHHHHHHHHHHHHCCCeEEEEEC----CHHHHHHHHHCCCcEEEC
Confidence 455554 89999999888888999887743 344566666677766533
No 221
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=22.90 E-value=1.6e+02 Score=27.83 Aligned_cols=70 Identities=10% Similarity=0.134 Sum_probs=42.8
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHh-HHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQ-LVQPIANGAFVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
..+|+..+|--|.++|..-.+.|.+++++.-.......+ ...+...|.++..+..| .++..+.++++.++
T Consensus 31 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 104 (283)
T 1g0o_A 31 VALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKI 104 (283)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 567888888889999987788899877765332100111 23355678777666554 44455555555443
No 222
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=22.85 E-value=2.7e+02 Score=26.13 Aligned_cols=83 Identities=12% Similarity=0.022 Sum_probs=48.6
Q ss_pred CEEEEcCCC-cCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCC---eeeccCCchhHHhHHHHHHHHHHHHcCC
Q 009781 249 PSIVFLPAN-KISIAQLVQPIANGAFVLSLDTDFDGCMQLIREVTSELP---IYLANSLNSLRLEGQKTAAIEILQQFDW 324 (526)
Q Consensus 249 ~~~V~vP~~-~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~---~~~~ns~Np~~i~G~~T~a~EI~eQl~~ 324 (526)
+.+++.-.+ .+-..-..++...|++|+.++-+.+...+.++++....+ .+..+-.++ +....+.-++.++.+
T Consensus 5 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~---~~v~~~~~~~~~~~g- 80 (264)
T 3tfo_A 5 KVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDR---HSVAAFAQAAVDTWG- 80 (264)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCH---HHHHHHHHHHHHHHS-
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCH---HHHHHHHHHHHHHcC-
Confidence 344454432 233333445667899999998777766666666644322 222332343 333445566777776
Q ss_pred CCCcEEEEeCCc
Q 009781 325 EVPDWVIVPGGN 336 (526)
Q Consensus 325 ~~pd~VvVP~G~ 336 (526)
.+|.+|-..|.
T Consensus 81 -~iD~lVnnAG~ 91 (264)
T 3tfo_A 81 -RIDVLVNNAGV 91 (264)
T ss_dssp -CCCEEEECCCC
T ss_pred -CCCEEEECCCC
Confidence 68999888764
No 223
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=22.77 E-value=1.3e+02 Score=28.47 Aligned_cols=66 Identities=18% Similarity=0.127 Sum_probs=39.9
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhH----HhHHhCCC---EEEEECCC---HHHHHHHHHHHHhc
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQL----VQPIANGA---FVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~----~q~~~~GA---~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
..+|+..+|--|.++|..-.+.|.+++++.-. ..++ ..+...|. ++..+..| .++..+.++++.++
T Consensus 8 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (280)
T 1xkq_A 8 TVIITGSSNGIGRTTAILFAQEGANVTITGRS----SERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ 83 (280)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence 56787888888999998778889887766422 2222 22334454 55555444 44455555555443
No 224
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=22.76 E-value=1.4e+02 Score=29.10 Aligned_cols=47 Identities=11% Similarity=0.010 Sum_probs=32.2
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEE
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVL 275 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi 275 (526)
..+|...+|..|.+++.+++..|.+++++.... .++..++.+|++.+
T Consensus 147 ~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~----~~~~~~~~lga~~~ 193 (340)
T 3gms_A 147 VLLVNACGSAIGHLFAQLSQILNFRLIAVTRNN----KHTEELLRLGAAYV 193 (340)
T ss_dssp EEEESSTTSHHHHHHHHHHHHHTCEEEEEESSS----TTHHHHHHHTCSEE
T ss_pred EEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCH----HHHHHHHhCCCcEE
Confidence 445555556789888888999999877665432 25556667788654
No 225
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=22.71 E-value=1.4e+02 Score=27.09 Aligned_cols=66 Identities=15% Similarity=0.105 Sum_probs=39.3
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHH----hHHh-CCCEEEEECCC---HHHHHHHHHHHHhc
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLV----QPIA-NGAFVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~----q~~~-~GA~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
..+|+..+|--|.+++..-.+.|.+++++.-. ..+.. .+.. .|.++..+..| .++..+.++++.++
T Consensus 9 ~vlVtGasggiG~~la~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (248)
T 2pnf_A 9 VSLVTGSTRGIGRAIAEKLASAGSTVIITGTS----GERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNL 82 (248)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESS----HHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEeCC----hHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence 56788888899999997777789887766432 12222 1222 46666555544 34444455554443
No 226
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=22.68 E-value=2.1e+02 Score=26.47 Aligned_cols=31 Identities=13% Similarity=0.167 Sum_probs=24.6
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEc
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFL 254 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~v 254 (526)
...+|+..+|--|.++|..-.+.|.+++++.
T Consensus 8 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~ 38 (250)
T 3nyw_A 8 GLAIITGASQGIGAVIAAGLATDGYRVVLIA 38 (250)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHTCEEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEE
Confidence 3678888888889999977777898876654
No 227
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=22.67 E-value=34 Score=24.72 Aligned_cols=10 Identities=20% Similarity=0.368 Sum_probs=8.1
Q ss_pred CCCCCCcccC
Q 009781 89 GPSCTESYSL 98 (526)
Q Consensus 89 t~~cg~~~~~ 98 (526)
|+.||..|+.
T Consensus 6 C~~CGyvYd~ 15 (52)
T 1e8j_A 6 CTVCGYEYDP 15 (52)
T ss_dssp CSSSCCCCCT
T ss_pred eCCCCeEEcC
Confidence 7888888874
No 228
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=22.58 E-value=3.6e+02 Score=27.31 Aligned_cols=32 Identities=19% Similarity=0.192 Sum_probs=25.6
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCC
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPA 256 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~ 256 (526)
+.|+..-+|-.|..++..++++|++++++-|.
T Consensus 36 ~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~ 67 (419)
T 4e4t_A 36 AWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPD 67 (419)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 34555566888999999999999999888665
No 229
>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=22.35 E-value=40 Score=26.30 Aligned_cols=27 Identities=22% Similarity=0.322 Sum_probs=20.7
Q ss_pred CCCCCCCCcccCCCceeeCCCCCcceecc
Q 009781 87 NAGPSCTESYSLDEVVYRSQSGGLLDVQH 115 (526)
Q Consensus 87 ~~t~~cg~~~~~~~~~~~c~cGGll~v~~ 115 (526)
++|..|++.+.+ ..+.|.||+.|=..+
T Consensus 26 nRC~~CrKkvgL--~gf~CrCg~~FCs~H 52 (74)
T 1wfl_A 26 NRCFMCRKKVGL--TGFDCRCGNLFCGLH 52 (74)
T ss_dssp TBCSSSCCBCGG--GCEECTTSCEECSSS
T ss_pred CcChhhCCcccc--cCeecCCCCEechhc
Confidence 568889998775 368999999885443
No 230
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=22.34 E-value=2e+02 Score=26.78 Aligned_cols=67 Identities=9% Similarity=-0.049 Sum_probs=41.0
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHH----hHHh-CCC-EEEEECC---CHHHHHHHHHHHHhc
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLV----QPIA-NGA-FVLSLDT---DFDGCMQLIREVTSE 294 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~----q~~~-~GA-~Vi~v~g---~~dd~~~~~~~~~~~ 294 (526)
...+|+..+|--|.++|..-.+.|.+++++.-. ..+.. ++.. ++. ++..+.. +.+++.+.++++.++
T Consensus 9 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (265)
T 3lf2_A 9 AVAVVTGGSSGIGLATVELLLEAGAAVAFCARD----GERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERT 84 (265)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 367888888888999998778889987666432 22222 2332 443 3555443 355566666666554
No 231
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=22.29 E-value=2.7e+02 Score=26.16 Aligned_cols=83 Identities=11% Similarity=0.085 Sum_probs=46.1
Q ss_pred CEEEEcCC-CcCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCC---eeeccCCchhHHhHHHHHHHHHHHHcCC
Q 009781 249 PSIVFLPA-NKISIAQLVQPIANGAFVLSLDTDFDGCMQLIREVTSELP---IYLANSLNSLRLEGQKTAAIEILQQFDW 324 (526)
Q Consensus 249 ~~~V~vP~-~~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~---~~~~ns~Np~~i~G~~T~a~EI~eQl~~ 324 (526)
+.+++.-. +.+-..-..++...|++|+.++-+.+...+.++++.+... .+..+-.++ +....+.-++.++++
T Consensus 25 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~---~~v~~~~~~~~~~~g- 100 (279)
T 3sju_A 25 QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTST---DEVHAAVAAAVERFG- 100 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCH---HHHHHHHHHHHHHHC-
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCH---HHHHHHHHHHHHHcC-
Confidence 34444433 2233333445667799998888777666666666544322 122222233 233445556667776
Q ss_pred CCCcEEEEeCCc
Q 009781 325 EVPDWVIVPGGN 336 (526)
Q Consensus 325 ~~pd~VvVP~G~ 336 (526)
.+|.+|-..|.
T Consensus 101 -~id~lv~nAg~ 111 (279)
T 3sju_A 101 -PIGILVNSAGR 111 (279)
T ss_dssp -SCCEEEECCCC
T ss_pred -CCcEEEECCCC
Confidence 57888877764
No 232
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=22.29 E-value=2.4e+02 Score=25.77 Aligned_cols=67 Identities=13% Similarity=0.203 Sum_probs=42.2
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcC-CHHhHHhHHhCCCEEEEECCC---HHHHHHHHHHH
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKI-SIAQLVQPIANGAFVLSLDTD---FDGCMQLIREV 291 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~-s~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~ 291 (526)
..+|+..+|--|.++|..-.+.|.+++++.-.+.. .......+...|.++..+..| .++..+.++++
T Consensus 9 ~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 79 (255)
T 3icc_A 9 VALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSL 79 (255)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHH
Confidence 56777777788999998778889988876543311 122233456778888777655 33344444443
No 233
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=22.23 E-value=1.5e+02 Score=27.50 Aligned_cols=69 Identities=17% Similarity=0.148 Sum_probs=40.4
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCC-HHh-HHhHHhC-CCEEEEECCC---HHHHHHHHHHHHhc
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKIS-IAQ-LVQPIAN-GAFVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s-~~k-~~q~~~~-GA~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
..+|+..+|--|.++|..-.+.|.+++++.-.. .. ..+ ..++... |.++..+..| .++..+.++++.++
T Consensus 6 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 80 (260)
T 1x1t_A 6 VAVVTGSTSGIGLGIATALAAQGADIVLNGFGD-AAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQ 80 (260)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEECCSC-HHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCc-chHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence 567777778889999988888899877664321 11 111 1122222 6677666655 34445555555443
No 234
>1s5p_A NAD-dependent deacetylase; protein deacetylase, SIR2 homologue, hydrolase; HET: ALY; 1.96A {Escherichia coli} SCOP: c.31.1.5
Probab=22.03 E-value=28 Score=33.10 Aligned_cols=33 Identities=12% Similarity=0.150 Sum_probs=21.4
Q ss_pred eEEEEeccchH--HHHHHHHHHhcCCCEEEEcCCC
Q 009781 225 IGVGCASTGDT--SAALSAYCASAGVPSIVFLPAN 257 (526)
Q Consensus 225 ~~Vv~aSSGN~--g~AlAa~aa~~Gi~~~V~vP~~ 257 (526)
..++..||++. ++.+..++.+.|.+++++=++.
T Consensus 170 l~lviGTSl~V~Pa~~l~~~a~~~g~~~i~iN~~~ 204 (235)
T 1s5p_A 170 IFIAIGTSGHVYPAAGFVHEAKLHGAHTVELNLEP 204 (235)
T ss_dssp EEEEESCCTTEETGGGHHHHHHHTTCEEEEEESSS
T ss_pred EEEEECcCCchhhHHHHHHHHHHcCCeEEEEECCC
Confidence 34556676665 4556666777788877776654
No 235
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=22.00 E-value=1.8e+02 Score=27.51 Aligned_cols=66 Identities=12% Similarity=0.102 Sum_probs=41.8
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhH-HhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQP-IANGAFVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~-~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
..+|+..+|--|.++|..-.+.|.+++++--. ..+..++ ...|.++..+..| .+++.+.++++.++
T Consensus 29 ~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 98 (277)
T 4dqx_A 29 VCIVTGGGSGIGRATAELFAKNGAYVVVADVN----EDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAK 98 (277)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESS----HHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 57888888888999998778889987766432 2233322 2346666555544 45556666665544
No 236
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=21.88 E-value=3.3e+02 Score=25.50 Aligned_cols=23 Identities=22% Similarity=0.273 Sum_probs=20.8
Q ss_pred cchHHHHHHHHHHhcCCCEEEEc
Q 009781 232 TGDTSAALSAYCASAGVPSIVFL 254 (526)
Q Consensus 232 SGN~g~AlAa~aa~~Gi~~~V~v 254 (526)
||-.|.++|-++.+.|.+++++.
T Consensus 33 Sg~iG~aiA~~~~~~Ga~V~l~~ 55 (226)
T 1u7z_A 33 SGKMGFAIAAAAARRGANVTLVS 55 (226)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccHHHHHHHHHHHHCCCEEEEEE
Confidence 79999999999999999988874
No 237
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=21.81 E-value=1.5e+02 Score=28.05 Aligned_cols=67 Identities=7% Similarity=-0.001 Sum_probs=40.2
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhH-HhCCCEEEEECC---CHHHHHHHHHHHHhc
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQP-IANGAFVLSLDT---DFDGCMQLIREVTSE 294 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~-~~~GA~Vi~v~g---~~dd~~~~~~~~~~~ 294 (526)
...+|+..+|--|.++|..-.+.|.+++++--. ..+.... ...|.++..+.. +.+++.+.++++.++
T Consensus 30 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 100 (277)
T 3gvc_A 30 KVAIVTGAGAGIGLAVARRLADEGCHVLCADID----GDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAA 100 (277)
T ss_dssp CEEEETTTTSTHHHHHHHHHHHTTCEEEEEESS----HHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHH
Confidence 357787777888999998778889987766432 2222222 223544444443 355566666666554
No 238
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=21.61 E-value=2.3e+02 Score=28.02 Aligned_cols=54 Identities=13% Similarity=0.027 Sum_probs=36.5
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhH-HhHH----hCCCEEEEEC
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQL-VQPI----ANGAFVLSLD 278 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~-~q~~----~~GA~Vi~v~ 278 (526)
+..++.-.+|.+.|+...++++|++++++-|++-.++... ..++ ..|+++...+
T Consensus 157 ~va~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~ 215 (315)
T 1pvv_A 157 KVVYVGDGNNVAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLH 215 (315)
T ss_dssp EEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEES
T ss_pred EEEEECCCcchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 3333333378899999999999999999999873333222 2222 5788876553
No 239
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=21.58 E-value=2.5e+02 Score=25.62 Aligned_cols=71 Identities=14% Similarity=0.089 Sum_probs=42.0
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCH-HhHHhHH-hCCCEEEEECCC---HHHHHHHHHHHHhcC
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISI-AQLVQPI-ANGAFVLSLDTD---FDGCMQLIREVTSEL 295 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~-~k~~q~~-~~GA~Vi~v~g~---~dd~~~~~~~~~~~~ 295 (526)
...+|+..+|.-|.+++..-.+.|.+++++.-.. ... .....+. .+|.++..+..| .++..+.++++.++.
T Consensus 15 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 90 (265)
T 1h5q_A 15 KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSA-ADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL 90 (265)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSC-TTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcc-hhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhc
Confidence 3578888889999999987778898877765322 121 1122222 346666555544 444555555554443
No 240
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=21.58 E-value=2.5e+02 Score=26.54 Aligned_cols=83 Identities=18% Similarity=0.168 Sum_probs=48.4
Q ss_pred CEEEEcCCC-cCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCC---eeeccCCchhHHhHHHHHHHHHHHHcCC
Q 009781 249 PSIVFLPAN-KISIAQLVQPIANGAFVLSLDTDFDGCMQLIREVTSELP---IYLANSLNSLRLEGQKTAAIEILQQFDW 324 (526)
Q Consensus 249 ~~~V~vP~~-~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~---~~~~ns~Np~~i~G~~T~a~EI~eQl~~ 324 (526)
+++++.-.+ .+-..-..++...|++|+.++-+.+...+.+.++....+ .+..+-.++ +....+.-++.++.+
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~---~~v~~~~~~~~~~~g- 104 (283)
T 3v8b_A 29 PVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDE---LQMRNAVRDLVLKFG- 104 (283)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCH---HHHHHHHHHHHHHHS-
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCH---HHHHHHHHHHHHHhC-
Confidence 455555432 233333445667899999888777776666666543222 222232343 233445666777776
Q ss_pred CCCcEEEEeCCc
Q 009781 325 EVPDWVIVPGGN 336 (526)
Q Consensus 325 ~~pd~VvVP~G~ 336 (526)
.+|.+|--.|.
T Consensus 105 -~iD~lVnnAg~ 115 (283)
T 3v8b_A 105 -HLDIVVANAGI 115 (283)
T ss_dssp -CCCEEEECCCC
T ss_pred -CCCEEEECCCC
Confidence 68988887764
No 241
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=21.43 E-value=1.6e+02 Score=27.87 Aligned_cols=69 Identities=9% Similarity=0.087 Sum_probs=40.1
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHh-HHhHH-hCCCEEEEECCC-------HHHHHHHHHHHHh
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQ-LVQPI-ANGAFVLSLDTD-------FDGCMQLIREVTS 293 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~-~~GA~Vi~v~g~-------~dd~~~~~~~~~~ 293 (526)
..+|+..+|--|.++|..-.+.|.+++++.-.......+ ..++. ..|.++..+..| .++..+.++++.+
T Consensus 25 ~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~~ 102 (288)
T 2x9g_A 25 AAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCFR 102 (288)
T ss_dssp EEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHHH
Confidence 567877778889999977778898877664321001111 12233 467666655544 4445555555444
No 242
>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}
Probab=21.31 E-value=2.2e+02 Score=29.42 Aligned_cols=72 Identities=15% Similarity=0.083 Sum_probs=45.8
Q ss_pred ceEEEEeccchHHHHHHHHHHh-cCCCEEEEc-CCCcCCH----------Hh-HHhHHhCCCEEEEECCC---HHHHHHH
Q 009781 224 VIGVGCASTGDTSAALSAYCAS-AGVPSIVFL-PANKISI----------AQ-LVQPIANGAFVLSLDTD---FDGCMQL 287 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~-~Gi~~~V~v-P~~~~s~----------~k-~~q~~~~GA~Vi~v~g~---~dd~~~~ 287 (526)
...+|+..|+--|.|+|...++ .|.+++++- ....... .. ...+...|.++..+..| .+++.++
T Consensus 62 KvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~~~ 141 (422)
T 3s8m_A 62 KKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARAQV 141 (422)
T ss_dssp SEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHH
T ss_pred CEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHHHH
Confidence 3578887777789999876677 899887764 2211110 01 14456788877666554 4556677
Q ss_pred HHHHHhcC
Q 009781 288 IREVTSEL 295 (526)
Q Consensus 288 ~~~~~~~~ 295 (526)
++++.++.
T Consensus 142 v~~i~~~~ 149 (422)
T 3s8m_A 142 IELIKTEM 149 (422)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHHc
Confidence 77777766
No 243
>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=21.24 E-value=50 Score=26.46 Aligned_cols=29 Identities=14% Similarity=0.265 Sum_probs=22.0
Q ss_pred CCCCCCCCCcccCCCceeeCCCCCcceecc
Q 009781 86 FNAGPSCTESYSLDEVVYRSQSGGLLDVQH 115 (526)
Q Consensus 86 ~~~t~~cg~~~~~~~~~~~c~cGGll~v~~ 115 (526)
.++|..|++.+.+- ..+.|.||+.|=-.+
T Consensus 25 ~~rC~~C~kkvgl~-~~f~CrCg~~FC~~H 53 (85)
T 1wff_A 25 MKHCFLCGKKTGLA-TSFECRCGNNFCASH 53 (85)
T ss_dssp CCBCSSSCCBCSSS-SCEECTTCCEECTTT
T ss_pred CccchhhCCeeccc-CCeEcCCCCEecccC
Confidence 35788899988863 368999999985444
No 244
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=21.24 E-value=98 Score=30.43 Aligned_cols=47 Identities=17% Similarity=0.059 Sum_probs=33.6
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEE
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVL 275 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi 275 (526)
..++.+-+|..|.+++.+|+..|.+++++... +.++..++.+|++.+
T Consensus 167 ~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~----~~~~~~~~~~Ga~~~ 213 (349)
T 3pi7_A 167 AFVMTAGASQLCKLIIGLAKEEGFRPIVTVRR----DEQIALLKDIGAAHV 213 (349)
T ss_dssp EEEESSTTSHHHHHHHHHHHHHTCEEEEEESC----GGGHHHHHHHTCSEE
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHcCCCEE
Confidence 34554567888999888999999977666543 346666778898654
No 245
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=21.15 E-value=2.8e+02 Score=26.93 Aligned_cols=47 Identities=13% Similarity=0.069 Sum_probs=33.7
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEEE
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLS 276 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~ 276 (526)
..+|.. .|..|.++..+|+..|.+++++... +.++..++.+|++.+.
T Consensus 179 ~VlV~G-aG~vG~~a~qla~~~Ga~Vi~~~~~----~~~~~~~~~lGa~~v~ 225 (348)
T 3two_A 179 KVGVAG-FGGLGSMAVKYAVAMGAEVSVFARN----EHKKQDALSMGVKHFY 225 (348)
T ss_dssp EEEEES-CSHHHHHHHHHHHHTTCEEEEECSS----STTHHHHHHTTCSEEE
T ss_pred EEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCC----HHHHHHHHhcCCCeec
Confidence 444544 5888999999999999976665543 2366677889997654
No 246
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=21.12 E-value=1.4e+02 Score=27.63 Aligned_cols=66 Identities=12% Similarity=0.039 Sum_probs=38.8
Q ss_pred eEEEEeccchHHHHHHHHHHhcC---CCEEEEcCCCcCCHHhHHhHHhCCCEEEEECCC---HHHHHHHHHHH
Q 009781 225 IGVGCASTGDTSAALSAYCASAG---VPSIVFLPANKISIAQLVQPIANGAFVLSLDTD---FDGCMQLIREV 291 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~G---i~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~ 291 (526)
..+|+..+|--|.+++....+.| .+++++.-.. ....++..+...+.++..+..| .++..+.++++
T Consensus 23 ~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~-~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 94 (267)
T 1sny_A 23 SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNR-EQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADI 94 (267)
T ss_dssp EEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCT-TSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHH
T ss_pred EEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecCh-hhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHH
Confidence 57888888888999998888888 7777765332 1222334444335555545444 33344444433
No 247
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=21.04 E-value=5e+02 Score=25.66 Aligned_cols=47 Identities=17% Similarity=0.136 Sum_probs=33.0
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEE
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVL 275 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi 275 (526)
..+|.. +|-.|.....+|+..|.+.+|.+- .++.++..++.+||+++
T Consensus 188 ~VlV~G-aG~vG~~aiqlAk~~Ga~~Vi~~~---~~~~~~~~a~~lGa~~i 234 (398)
T 1kol_A 188 TVYVAG-AGPVGLAAAASARLLGAAVVIVGD---LNPARLAHAKAQGFEIA 234 (398)
T ss_dssp EEEEEC-CSHHHHHHHHHHHHTTCSEEEEEE---SCHHHHHHHHHTTCEEE
T ss_pred EEEEEC-CcHHHHHHHHHHHHCCCCeEEEEc---CCHHHHHHHHHcCCcEE
Confidence 444444 688898888899999986444442 24567788889999843
No 248
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=21.02 E-value=1.6e+02 Score=28.88 Aligned_cols=51 Identities=16% Similarity=0.016 Sum_probs=34.7
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEE
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVL 275 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi 275 (526)
..+|...+|-.|.++..+|+..|.++++++....-...++..++.+||+.+
T Consensus 170 ~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~v 220 (357)
T 1zsy_A 170 SVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHV 220 (357)
T ss_dssp EEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEE
T ss_pred EEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEE
Confidence 444444458889888888999999887777443112335566778998754
No 249
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=21.02 E-value=1.3e+02 Score=27.30 Aligned_cols=69 Identities=10% Similarity=0.163 Sum_probs=40.2
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHh-HHhHHhCCCEEEE-ECCC---HHHHHHHHHHHHh
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQ-LVQPIANGAFVLS-LDTD---FDGCMQLIREVTS 293 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~~GA~Vi~-v~g~---~dd~~~~~~~~~~ 293 (526)
..+|+..+|-.|.+++..-.+.|.++++++-.+.....+ ..++...|.++.. +..| .++..+.++++.+
T Consensus 3 ~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 76 (245)
T 2ph3_A 3 KALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAE 76 (245)
T ss_dssp EEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHH
Confidence 467888888889999988888898887774332111111 1234455665544 4443 4444555554433
No 250
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=20.97 E-value=2.6e+02 Score=25.83 Aligned_cols=31 Identities=6% Similarity=0.109 Sum_probs=25.3
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEc
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFL 254 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~v 254 (526)
...+|+..+|.-|.+++..-.+.|.+++++.
T Consensus 17 k~vlITGasggiG~~~a~~l~~~G~~V~~~~ 47 (278)
T 2bgk_A 17 KVAIITGGAGGIGETTAKLFVRYGAKVVIAD 47 (278)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEc
Confidence 3578888889999999987788898877663
No 251
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=20.92 E-value=1.7e+02 Score=27.59 Aligned_cols=66 Identities=18% Similarity=0.158 Sum_probs=39.5
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhH-HhCCCEE--EEEC-CCHHHHHHHHHHHHhc
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQP-IANGAFV--LSLD-TDFDGCMQLIREVTSE 294 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~-~~~GA~V--i~v~-g~~dd~~~~~~~~~~~ 294 (526)
..+|+..+|--|.++|..-.+.|.+++++.- +..++... ...+.++ +.+| .+.++..+.++++.++
T Consensus 30 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 99 (272)
T 4dyv_A 30 IAIVTGAGSGVGRAVAVALAGAGYGVALAGR----RLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEK 99 (272)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHH
Confidence 5677777788899999887888988766532 22233332 2234444 4444 2355566666665544
No 252
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=20.66 E-value=2.1e+02 Score=28.18 Aligned_cols=47 Identities=15% Similarity=-0.106 Sum_probs=32.5
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEE
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVL 275 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi 275 (526)
..+|...+|..|.+++.+++..|.+++++.. ++.++..++.+|++.+
T Consensus 166 ~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~----~~~~~~~~~~~Ga~~~ 212 (362)
T 2c0c_A 166 KVLVTAAAGGTGQFAMQLSKKAKCHVIGTCS----SDEKSAFLKSLGCDRP 212 (362)
T ss_dssp EEEETTTTBTTHHHHHHHHHHTTCEEEEEES----SHHHHHHHHHTTCSEE
T ss_pred EEEEeCCCcHHHHHHHHHHHhCCCEEEEEEC----CHHHHHHHHHcCCcEE
Confidence 4445454788899888888888987555543 3456667777888654
No 253
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=20.61 E-value=2.7e+02 Score=25.91 Aligned_cols=71 Identities=10% Similarity=0.058 Sum_probs=41.1
Q ss_pred ceEEEEeccc--hHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhH-Hh-CC--CEEEEEC-CCHHHHHHHHHHHHhcC
Q 009781 224 VIGVGCASTG--DTSAALSAYCASAGVPSIVFLPANKISIAQLVQP-IA-NG--AFVLSLD-TDFDGCMQLIREVTSEL 295 (526)
Q Consensus 224 ~~~Vv~aSSG--N~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~-~~-~G--A~Vi~v~-g~~dd~~~~~~~~~~~~ 295 (526)
...||+..+| --|.++|..-++.|.++++..=.. ....+..+. .. .+ +..+.+| .+.+++.+.++++.++.
T Consensus 7 K~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (256)
T 4fs3_A 7 KTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKE-RSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDV 84 (256)
T ss_dssp CEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSG-GGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCH-HHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 3567776544 358888887788999877765332 122233322 22 23 3444455 34666777777766654
No 254
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=20.60 E-value=3.2e+02 Score=24.79 Aligned_cols=68 Identities=15% Similarity=0.017 Sum_probs=40.7
Q ss_pred HHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCC---eeeccCCchhHHhHHHHHHHHHHHHcCCCCCcEEEEeCCc
Q 009781 264 LVQPIANGAFVLSLDTDFDGCMQLIREVTSELP---IYLANSLNSLRLEGQKTAAIEILQQFDWEVPDWVIVPGGN 336 (526)
Q Consensus 264 ~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~---~~~~ns~Np~~i~G~~T~a~EI~eQl~~~~pd~VvVP~G~ 336 (526)
..++...|++|+.+.-+.+...+...++.+... ++..+-.++ +....+.-++.++.+ .+|.||-..|.
T Consensus 22 a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~~~~~~~~--~id~li~~Ag~ 92 (247)
T 3lyl_A 22 AHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDI---ESIQNFFAEIKAENL--AIDILVNNAGI 92 (247)
T ss_dssp HHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCH---HHHHHHHHHHHHTTC--CCSEEEECCCC
T ss_pred HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCH---HHHHHHHHHHHHHcC--CCCEEEECCCC
Confidence 445667899999888777666665555543321 222232333 233445556666655 68988888764
No 255
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=20.58 E-value=3.9e+02 Score=26.09 Aligned_cols=49 Identities=12% Similarity=0.025 Sum_probs=34.2
Q ss_pred CceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEEE
Q 009781 223 PVIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVL 275 (526)
Q Consensus 223 ~~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi 275 (526)
+...+|...+|..|.+++..++..|.+++++.. ++.++..++.+|++.+
T Consensus 171 g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~----~~~~~~~~~~~ga~~~ 219 (351)
T 1yb5_A 171 GESVLVHGASGGVGLAACQIARAYGLKILGTAG----TEEGQKIVLQNGAHEV 219 (351)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES----SHHHHHHHHHTTCSEE
T ss_pred cCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC----ChhHHHHHHHcCCCEE
Confidence 345666676789999999899999987655543 3446666677887643
No 256
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=20.55 E-value=3.2e+02 Score=25.76 Aligned_cols=83 Identities=13% Similarity=0.037 Sum_probs=48.1
Q ss_pred CEEEEcCCC-cCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCC-eee--ccCCchhHHhHHHHHHHHHHHHcCC
Q 009781 249 PSIVFLPAN-KISIAQLVQPIANGAFVLSLDTDFDGCMQLIREVTSELP-IYL--ANSLNSLRLEGQKTAAIEILQQFDW 324 (526)
Q Consensus 249 ~~~V~vP~~-~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~-~~~--~ns~Np~~i~G~~T~a~EI~eQl~~ 324 (526)
+.+++.-.+ .+-..-..++...|++|+.++-+.+...+..+++..... ... .+-.++ +....+.-++.++.+
T Consensus 9 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~---~~v~~~~~~~~~~~g- 84 (280)
T 3tox_A 9 KIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDE---ALHEALVELAVRRFG- 84 (280)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCH---HHHHHHHHHHHHHHS-
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCH---HHHHHHHHHHHHHcC-
Confidence 445555432 233333445667899999888777766666666543222 222 222233 333455666777777
Q ss_pred CCCcEEEEeCCc
Q 009781 325 EVPDWVIVPGGN 336 (526)
Q Consensus 325 ~~pd~VvVP~G~ 336 (526)
.+|.+|--.|.
T Consensus 85 -~iD~lvnnAg~ 95 (280)
T 3tox_A 85 -GLDTAFNNAGA 95 (280)
T ss_dssp -CCCEEEECCCC
T ss_pred -CCCEEEECCCC
Confidence 68999888773
No 257
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=20.54 E-value=32 Score=24.33 Aligned_cols=9 Identities=22% Similarity=0.457 Sum_probs=7.8
Q ss_pred CCCCCCccc
Q 009781 89 GPSCTESYS 97 (526)
Q Consensus 89 t~~cg~~~~ 97 (526)
|+.||..|+
T Consensus 7 C~vCGyvyd 15 (46)
T 6rxn_A 7 CNVCGYEYD 15 (46)
T ss_dssp ETTTCCEEC
T ss_pred CCCCCeEEe
Confidence 889999886
No 258
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=20.41 E-value=1.8e+02 Score=26.75 Aligned_cols=67 Identities=15% Similarity=0.082 Sum_probs=41.6
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhH-HhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQP-IANGAFVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~-~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
...+|+..+|--|.++|..-...|.+++++--. ..+.... ...|.++..+..| .++..+.++++.++
T Consensus 7 k~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 77 (247)
T 3rwb_A 7 KTALVTGAAQGIGKAIAARLAADGATVIVSDIN----AEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQAL 77 (247)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSC----HHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 367888888888999998888889887665322 2233222 2346666666654 44455555555443
No 259
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=20.24 E-value=41 Score=28.04 Aligned_cols=25 Identities=8% Similarity=0.024 Sum_probs=15.9
Q ss_pred CCCCCCCCccc-CCCceeeCC-CCCcc
Q 009781 87 NAGPSCTESYS-LDEVVYRSQ-SGGLL 111 (526)
Q Consensus 87 ~~t~~cg~~~~-~~~~~~~c~-cGGll 111 (526)
.+|++||.+|. --...-+|| |+.--
T Consensus 68 ~~C~~CG~~F~~~~~kPsrCP~CkSe~ 94 (105)
T 2gmg_A 68 AQCRKCGFVFKAEINIPSRCPKCKSEW 94 (105)
T ss_dssp CBBTTTCCBCCCCSSCCSSCSSSCCCC
T ss_pred cChhhCcCeecccCCCCCCCcCCCCCc
Confidence 45999999972 112234686 87754
No 260
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=20.22 E-value=34 Score=25.04 Aligned_cols=11 Identities=18% Similarity=0.157 Sum_probs=8.4
Q ss_pred CCCCCCcccCC
Q 009781 89 GPSCTESYSLD 99 (526)
Q Consensus 89 t~~cg~~~~~~ 99 (526)
|+.||..|+.+
T Consensus 6 C~~CGyvYd~~ 16 (55)
T 2v3b_B 6 CVVCGFIYDEA 16 (55)
T ss_dssp ETTTCCEEETT
T ss_pred eCCCCeEECCC
Confidence 78888888753
No 261
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=20.16 E-value=2.9e+02 Score=24.13 Aligned_cols=46 Identities=15% Similarity=-0.074 Sum_probs=30.5
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEE
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFV 274 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~V 274 (526)
..+|+..+|..|.+++..++..|.+++++.. ++.++..++.+|++.
T Consensus 41 ~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~----~~~~~~~~~~~g~~~ 86 (198)
T 1pqw_A 41 RVLIHSATGGVGMAAVSIAKMIGARIYTTAG----SDAKREMLSRLGVEY 86 (198)
T ss_dssp EEEETTTTSHHHHHHHHHHHHHTCEEEEEES----SHHHHHHHHTTCCSE
T ss_pred EEEEeeCCChHHHHHHHHHHHcCCEEEEEeC----CHHHHHHHHHcCCCE
Confidence 4455555688899999888888987665543 234555556677643
No 262
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=20.15 E-value=1.6e+02 Score=26.27 Aligned_cols=55 Identities=11% Similarity=0.118 Sum_probs=35.9
Q ss_pred eEEEEeccchHHHHHHHHHH-hcCCCEEEEcCCCcCCHH-hHHhHHhCCCEEEEECCCHHH
Q 009781 225 IGVGCASTGDTSAALSAYCA-SAGVPSIVFLPANKISIA-QLVQPIANGAFVLSLDTDFDG 283 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa-~~Gi~~~V~vP~~~~s~~-k~~q~~~~GA~Vi~v~g~~dd 283 (526)
..+|+..||..|.+++.... ..|.+++++.-. +. +...+...+..+..+.+|..|
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~D~~d 63 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTYTDMHITLYGRQ----LKTRIPPEIIDHERVTVIEGSFQN 63 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCCCEEEEEESS----HHHHSCHHHHTSTTEEEEECCTTC
T ss_pred EEEEEeCCcHHHHHHHHHHHhcCCceEEEEecC----ccccchhhccCCCceEEEECCCCC
Confidence 36888888999999987666 789988776532 23 333333344555556665544
No 263
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=20.15 E-value=1.8e+02 Score=27.44 Aligned_cols=67 Identities=13% Similarity=0.134 Sum_probs=43.6
Q ss_pred ceEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhH-HhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009781 224 VIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQP-IANGAFVLSLDTD---FDGCMQLIREVTSE 294 (526)
Q Consensus 224 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~-~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 294 (526)
...+|+..+|--|.++|..-.+.|.+++++-- +..++.++ ..+|.++..+..| .++..+.++++.++
T Consensus 6 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 76 (281)
T 3zv4_A 6 EVALITGGASGLGRALVDRFVAEGARVAVLDK----SAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAA 76 (281)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC----CHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 36788888888899999877888988777642 23333333 3456666555544 55566666666554
No 264
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=20.05 E-value=3.3e+02 Score=24.91 Aligned_cols=66 Identities=6% Similarity=-0.115 Sum_probs=41.0
Q ss_pred eEEEEeccchHHHHHHHHHHhcCCCEEEEcCCCcCCHHhHHhHHhCCCEE--EEEC-CCHHHHHHHHHHHHhc
Q 009781 225 IGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFV--LSLD-TDFDGCMQLIREVTSE 294 (526)
Q Consensus 225 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~V--i~v~-g~~dd~~~~~~~~~~~ 294 (526)
..+|+..+|--|.++|..-.+.|.+++++-- +..+..++.....++ +.+| .+.++..+.++++.++
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 72 (247)
T 3dii_A 4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDI----DEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEK 72 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHhcccCCeEEeeCCCHHHHHHHHHHHHHH
Confidence 5688888888899999777788988776532 334444444433333 3333 2355566666666554
Done!