BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009782
(526 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SB36|PP337_ARATH Pentatricopeptide repeat-containing protein At4g25270,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E53 PE=3
SV=1
Length = 527
Score = 676 bits (1743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/501 (63%), Positives = 400/501 (79%), Gaps = 1/501 (0%)
Query: 26 RSRKQRRQKQQQISRNRITTFSSYPKSSPTPLLTNQKAFPKTKLQALDSIIQDLESSVQN 85
R +Q +Q +Q N T S+ K SPTPLL +++ +T+L+ALDS+I DLE+S Q
Sbjct: 26 RHHQQLKQHRQNQYNNNGFTSLSFTKPSPTPLLIEKQSIHRTQLEALDSVITDLETSAQK 85
Query: 86 GITV-QTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLIDE 144
GI++ + E FASLLETCY L+A++HG+++H LIP LLR N GISSKL+RLYA+ G +
Sbjct: 86 GISLTEPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEV 145
Query: 145 AHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKAC 204
AH+VFD+MS R + F WNSLISGYAELG+YEDA+ALYFQM E+GV+PD+FTFPRVLKAC
Sbjct: 146 AHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKAC 205
Query: 205 AGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISYN 264
G+G +++GE +H D V+ GFG+D +VLNALV MYAKCGDIVKAR VFD I +KD +S+N
Sbjct: 206 GGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWN 265
Query: 265 SMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSILANASLLRIGAQVHGWVLRRGVE 324
SMLTGY+HHGLL EA DIFR M+ NG +PD VAISS+LA + G Q+HGWV+RRG+E
Sbjct: 266 SMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKHGRQLHGWVIRRGME 325
Query: 325 WDLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAHSKDHEALIYFEQMERD 384
W+L +AN+LIV+YSK G+L QAC++FD M ++D VSWN+II AHSK+ L YFEQM R
Sbjct: 326 WELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSNGLKYFEQMHRA 385
Query: 385 GVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVNLYGRAGLIDE 444
PD +TFVS+LS CA+ G V+ GERLFS+M ++YGI P++EHYACMVNLYGRAG+++E
Sbjct: 386 NAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEE 445
Query: 445 AYSMIVEKMEFEASPVVWGALLYACYLHGNVCMGETAAQKLFELEPDNEHNFELLIKIYG 504
AYSMIV++M EA P VWGALLYACYLHGN +GE AAQ+LFELEPDNEHNFELLI+IY
Sbjct: 446 AYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYS 505
Query: 505 NAGRLDDVERVERMLVDRGLE 525
A R +DVERV +M+VDRGLE
Sbjct: 506 KAKRAEDVERVRQMMVDRGLE 526
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 307 bits (786), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 176/474 (37%), Positives = 277/474 (58%), Gaps = 24/474 (5%)
Query: 73 DSIIQDL--ESSVQNGITV-------QTETFASLLETCYQLKAVEHGIKLHRLIPTNLLR 123
+ +IQ L E ++ I V +T+ L+ C ++ +++HR I N
Sbjct: 50 NQLIQSLCKEGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSD 109
Query: 124 KNKGISSKLLRLYATFGLIDEAHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYF 183
++ +++KL+ +Y+ G +D A +VFD+ RT + WN+L G E+ + LY+
Sbjct: 110 QDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYV--WNALFRALTLAGHGEEVLGLYW 167
Query: 184 QMEEEGVEPDQFTFPRVLKACAG----LGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMY 239
+M GVE D+FT+ VLKAC + + G+++H R G+ +++ LVDMY
Sbjct: 168 KMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMY 227
Query: 240 AKCGDIVKARTVFDRIGNKDLISYNSMLTGYIHHGLLVEAFDIFRGMILNGFD--PDPVA 297
A+ G + A VF + ++++S+++M+ Y +G EA FR M+ D P+ V
Sbjct: 228 ARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVT 287
Query: 298 ISSIL-ANASL--LRIGAQVHGWVLRRGVEWDLCIANSLIVVYSKDGKLDQACWLFDHMP 354
+ S+L A ASL L G +HG++LRRG++ L + ++L+ +Y + GKL+ +FD M
Sbjct: 288 MVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMH 347
Query: 355 QKDVVSWNSIIHA---HSKDHEALIYFEQMERDGVLPDHLTFVSLLSACAHLGSVKVGER 411
+DVVSWNS+I + H +A+ FE+M +G P +TFVS+L AC+H G V+ G+R
Sbjct: 348 DRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKR 407
Query: 412 LFSVMVEKYGISPRVEHYACMVNLYGRAGLIDEAYSMIVEKMEFEASPVVWGALLYACYL 471
LF M +GI P++EHYACMV+L GRA +DEA M V+ M E P VWG+LL +C +
Sbjct: 408 LFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKM-VQDMRTEPGPKVWGSLLGSCRI 466
Query: 472 HGNVCMGETAAQKLFELEPDNEHNFELLIKIYGNAGRLDDVERVERMLVDRGLE 525
HGNV + E A+++LF LEP N N+ LL IY A D+V+RV+++L RGL+
Sbjct: 467 HGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQ 520
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 289 bits (740), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 164/447 (36%), Positives = 250/447 (55%), Gaps = 10/447 (2%)
Query: 85 NGITVQTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLIDE 144
+GI + T S+ C + + G +H + + + LL +Y+ G +D
Sbjct: 290 SGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDS 349
Query: 145 AHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKAC 204
A VF +MS+R+ ++ S+I+GYA G +A+ L+ +MEEEG+ PD +T VL C
Sbjct: 350 AKAVFREMSDRSVVSYT--SMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCC 407
Query: 205 AGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISYN 264
A L+ G++VH GFD FV NAL+DMYAKCG + +A VF + KD+IS+N
Sbjct: 408 ARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWN 467
Query: 265 SMLTGYIHHGLLVEAFDIFRGMILNG-FDPDPVAISSIL---ANASLLRIGAQVHGWVLR 320
+++ GY + EA +F ++ F PD ++ +L A+ S G ++HG+++R
Sbjct: 468 TIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMR 527
Query: 321 RGVEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHA---HSKDHEALIY 377
G D +ANSL+ +Y+K G L A LFD + KD+VSW +I H EA+
Sbjct: 528 NGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIAL 587
Query: 378 FEQMERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVNLYG 437
F QM + G+ D ++FVSLL AC+H G V G R F++M + I P VEHYAC+V++
Sbjct: 588 FNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLA 647
Query: 438 RAGLIDEAYSMIVEKMEFEASPVVWGALLYACYLHGNVCMGETAAQKLFELEPDNEHNFE 497
R G + +AY I E M +WGALL C +H +V + E A+K+FELEP+N +
Sbjct: 648 RTGDLIKAYRFI-ENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYV 706
Query: 498 LLIKIYGNAGRLDDVERVERMLVDRGL 524
L+ IY A + + V+R+ + + RGL
Sbjct: 707 LMANIYAEAEKWEQVKRLRKRIGQRGL 733
Score = 196 bits (498), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 124/403 (30%), Positives = 209/403 (51%), Gaps = 22/403 (5%)
Query: 83 VQNGITVQTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLI 142
+ +G+ + + TF+ + ++ L++V G +LH I + + + + L+ Y +
Sbjct: 187 MSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRV 246
Query: 143 DEAHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLK 202
D A +VFD+M+ R + WNS+I+GY G E ++++ QM G+E D T V
Sbjct: 247 DSARKVFDEMTERDVIS--WNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFA 304
Query: 203 ACAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLIS 262
CA LI +G VH V+ F + N L+DMY+KCGD+ A+ VF + ++ ++S
Sbjct: 305 GCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVS 364
Query: 263 YNSMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSIL---ANASLLRIGAQVHGWVL 319
Y SM+ GY GL EA +F M G PD ++++L A LL G +VH W+
Sbjct: 365 YTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIK 424
Query: 320 RRGVEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAHSKD---HEALI 376
+ +D+ ++N+L+ +Y+K G + +A +F M KD++SWN+II +SK+ +EAL
Sbjct: 425 ENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALS 484
Query: 377 YFE-QMERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYA-CMVN 434
F +E PD T +L ACA L + G + ++ S R H A +V+
Sbjct: 485 LFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDR--HVANSLVD 542
Query: 435 LYGRAGLIDEAYSMIVEKMEFE--ASP--VVWGALLYACYLHG 473
+Y + G ++++ M F+ AS V W ++ +HG
Sbjct: 543 MYAKCG------ALLLAHMLFDDIASKDLVSWTVMIAGYGMHG 579
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/364 (30%), Positives = 196/364 (53%), Gaps = 11/364 (3%)
Query: 89 VQTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLIDEAHQV 148
+ T S+L+ C K+++ G ++ I N + + SKL +Y G + EA +V
Sbjct: 92 IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRV 151
Query: 149 FDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKACAGLG 208
FD++ + A WN L++ A+ G++ +I L+ +M GVE D +TF V K+ + L
Sbjct: 152 FDEV--KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLR 209
Query: 209 LIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISYNSMLT 268
+ GE++H ++ GFG V N+LV Y K + AR VFD + +D+IS+NS++
Sbjct: 210 SVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIIN 269
Query: 269 GYIHHGLLVEAFDIFRGMILNGFDPDPVAISSIL---ANASLLRIGAQVHGWVLRRGVEW 325
GY+ +GL + +F M+++G + D I S+ A++ L+ +G VH ++
Sbjct: 270 GYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSR 329
Query: 326 DLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAHSKD---HEALIYFEQME 382
+ N+L+ +YSK G LD A +F M + VVS+ S+I ++++ EA+ FE+ME
Sbjct: 330 EDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEME 389
Query: 383 RDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEK-YGISPRVEHYACMVNLYGRAGL 441
+G+ PD T ++L+ CA + G+R+ + E G V + ++++Y + G
Sbjct: 390 EEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN--ALMDMYAKCGS 447
Query: 442 IDEA 445
+ EA
Sbjct: 448 MQEA 451
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 172/379 (45%), Gaps = 60/379 (15%)
Query: 76 IQDLESSVQNGITVQTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRL 135
++ E + GI+ T ++L C + + ++ G ++H I N L + +S+ L+ +
Sbjct: 382 VKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDM 441
Query: 136 YATFGLIDEAHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALY-FQMEEEGVEPDQ 194
YA G + EA VF +M R WN++I GY++ +A++L+ +EE+ PD+
Sbjct: 442 YAKCGSMQEAELVFSEM--RVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDE 499
Query: 195 FTFPRVLKACAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDR 254
T VL ACA L G ++H +R G+ D V N+LVDMYAKCG ++ A +FD
Sbjct: 500 RTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDD 559
Query: 255 IGNKDLISYNSMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSILANASLLRIGAQV 314
I +KDL+S+ M+ GY HG EA +F M G + D ++ S+L S G
Sbjct: 560 IASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACS--HSGLVD 617
Query: 315 HGW----VLRR------GVEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSI 364
GW ++R VE CI + L ++ G L +A ++MP
Sbjct: 618 EGWRFFNIMRHECKIEPTVEHYACIVDML----ARTGDLIKAYRFIENMP---------- 663
Query: 365 IHAHSKDHEALIYFEQMERDGVLPDHLTFVSLLSACAHLGSV----KVGERLFSVMVEKY 420
+ PD + +LL C V KV E++F + E
Sbjct: 664 ---------------------IPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENT 702
Query: 421 GISPRVEHYACMVNLYGRA 439
G +Y M N+Y A
Sbjct: 703 G------YYVLMANIYAEA 715
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 282 bits (721), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 159/477 (33%), Positives = 272/477 (57%), Gaps = 38/477 (7%)
Query: 86 GITVQTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLIDEA 145
G+ + TF +L++C + KA + G ++H + + + + L+ +Y G +++A
Sbjct: 129 GLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDA 188
Query: 146 HQVFDQMSNRTAFAF-----------------------------PWNSLISGYAELGEYE 176
H+VFD+ +R ++ WN++ISGYAE G Y+
Sbjct: 189 HKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYK 248
Query: 177 DAIALYFQMEEEGVEPDQFTFPRVLKACAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALV 236
+A+ L+ M + V PD+ T V+ ACA G I +G +VHL GFG + ++NAL+
Sbjct: 249 EALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALI 308
Query: 237 DMYAKCGDIVKARTVFDRIGNKDLISYNSMLTGYIHHGLLVEAFDIFRGMILNGFDPDPV 296
D+Y+KCG++ A +F+R+ KD+IS+N+++ GY H L EA +F+ M+ +G P+ V
Sbjct: 309 DLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDV 368
Query: 297 AISSIL---ANASLLRIGAQVHGWVLRR--GVEWDLCIANSLIVVYSKDGKLDQACWLFD 351
+ SIL A+ + IG +H ++ +R GV + SLI +Y+K G ++ A +F+
Sbjct: 369 TMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFN 428
Query: 352 HMPQKDVVSWNSIIHA---HSKDHEALIYFEQMERDGVLPDHLTFVSLLSACAHLGSVKV 408
+ K + SWN++I H + + F +M + G+ PD +TFV LLSAC+H G + +
Sbjct: 429 SILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDL 488
Query: 409 GERLFSVMVEKYGISPRVEHYACMVNLYGRAGLIDEAYSMIVEKMEFEASPVVWGALLYA 468
G +F M + Y ++P++EHY CM++L G +GL + ++ ME E V+W +LL A
Sbjct: 489 GRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLF-KEAEEMINMMEMEPDGVIWCSLLKA 547
Query: 469 CYLHGNVCMGETAAQKLFELEPDNEHNFELLIKIYGNAGRLDDVERVERMLVDRGLE 525
C +HGNV +GE+ A+ L ++EP+N ++ LL IY +AGR ++V + +L D+G++
Sbjct: 548 CKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMK 604
Score = 185 bits (470), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 136/471 (28%), Positives = 232/471 (49%), Gaps = 61/471 (12%)
Query: 88 TVQTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLR---LYATFGLIDE 144
+++ SLL C L+++ I ++I L N +S KL+ L F +
Sbjct: 30 SIRNHPSLSLLHNCKTLQSLR--IIHAQMIKIGLHNTNYALS-KLIEFCILSPHFEGLPY 86
Query: 145 AHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKAC 204
A VF + WN++ G+A + A+ LY M G+ P+ +TFP VLK+C
Sbjct: 87 AISVFKTIQEPNLLI--WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSC 144
Query: 205 AGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCG---------------DIV--- 246
A + G+++H ++ G D +V +L+ MY + G D+V
Sbjct: 145 AKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYT 204
Query: 247 -------------KARTVFDRIGNKDLISYNSMLTGYIHHGLLVEAFDIFRGMILNGFDP 293
A+ +FD I KD++S+N+M++GY G EA ++F+ M+ P
Sbjct: 205 ALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRP 264
Query: 294 DP---VAISSILANASLLRIGAQVHGWVLRRGVEWDLCIANSLIVVYSKDGKLDQACWLF 350
D V + S A + + +G QVH W+ G +L I N+LI +YSK G+L+ AC LF
Sbjct: 265 DESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLF 324
Query: 351 DHMPQKDVVSWNSIIHAHSKDH---EALIYFEQMERDGVLPDHLTFVSLLSACAHLGSVK 407
+ +P KDV+SWN++I ++ + EAL+ F++M R G P+ +T +S+L ACAHLG++
Sbjct: 325 ERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAID 384
Query: 408 VGERLFSVMVEKY--GISPRVEHYACMVNLYGRAGLIDEAYSMIVEKMEFEASPVVWGAL 465
+G R V ++K G++ ++++Y + G I+ A+ + + S W A+
Sbjct: 385 IG-RWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSS--WNAM 441
Query: 466 LYACYLHGNVCMGETAAQKLFE------LEPDNEHNFELLIKIYGNAGRLD 510
++ +HG A+ LF ++PD+ F L+ ++G LD
Sbjct: 442 IFGFAMHGRA----DASFDLFSRMRKIGIQPDDI-TFVGLLSACSHSGMLD 487
Score = 129 bits (323), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 166/364 (45%), Gaps = 33/364 (9%)
Query: 83 VQNGITVQTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLI 142
++ + T +++ C Q ++E G ++H I + N I + L+ LY+ G +
Sbjct: 258 MKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGEL 317
Query: 143 DEAHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLK 202
+ A +F+++ + + WN+LI GY + Y++A+ L+ +M G P+ T +L
Sbjct: 318 ETACGLFERLPYKDVIS--WNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILP 375
Query: 203 ACAGLGLIRVGEKVH--LDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDL 260
ACA LG I +G +H +D G + +L+DMYAKCGDI A VF+ I +K L
Sbjct: 376 ACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSL 435
Query: 261 ISYNSMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSILANASLLRIGAQVHGWVLR 320
S+N+M+ G+ HG +FD+F M G PD + +L+ S H +L
Sbjct: 436 SSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACS--------HSGMLD 487
Query: 321 RGVEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAHSKDHEALIYFEQ 380
G I ++ Y KL+ + D + + E
Sbjct: 488 LGRH----IFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFK---------------EAEEM 528
Query: 381 MERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVNLYGRAG 440
+ + PD + + SLL AC G+V++GE +++ +P Y + N+Y AG
Sbjct: 529 INMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENP--GSYVLLSNIYASAG 586
Query: 441 LIDE 444
+E
Sbjct: 587 RWNE 590
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 281 bits (720), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 162/485 (33%), Positives = 265/485 (54%), Gaps = 47/485 (9%)
Query: 84 QNGITVQTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLID 143
+ G + +FAS+L C L + G+++H LI + + I S L+ +Y+ G ++
Sbjct: 145 KEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVN 204
Query: 144 EAHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKA 203
+A +VFD+M +R + WNSLI+ + + G +A+ ++ M E VEPD+ T V+ A
Sbjct: 205 DAQRVFDEMGDRNVVS--WNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISA 262
Query: 204 CAGLGLIRVGEKVHLDAVRFGFGFDGFVL-NALVDMYAKCGDIVKARTVFD--------- 253
CA L I+VG++VH V+ + +L NA VDMYAKC I +AR +FD
Sbjct: 263 CASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIA 322
Query: 254 ----------------------RIGNKDLISYNSMLTGYIHHGLLVEAFDIFRGMILNGF 291
++ ++++S+N+++ GY +G EA +F +
Sbjct: 323 ETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESV 382
Query: 292 DPDPVAISSIL---ANASLLRIGAQVHGWVLRRGVEW------DLCIANSLIVVYSKDGK 342
P + ++IL A+ + L +G Q H VL+ G ++ D+ + NSLI +Y K G
Sbjct: 383 CPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGC 442
Query: 343 LDQACWLFDHMPQKDVVSWNSIIHAHSKD---HEALIYFEQMERDGVLPDHLTFVSLLSA 399
+++ +F M ++D VSWN++I +++ +EAL F +M G PDH+T + +LSA
Sbjct: 443 VEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSA 502
Query: 400 CAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVNLYGRAGLIDEAYSMIVEKMEFEASP 459
C H G V+ G FS M +G++P +HY CMV+L GRAG ++EA SMI E+M +
Sbjct: 503 CGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMI-EEMPMQPDS 561
Query: 460 VVWGALLYACYLHGNVCMGETAAQKLFELEPDNEHNFELLIKIYGNAGRLDDVERVERML 519
V+WG+LL AC +H N+ +G+ A+KL E+EP N + LL +Y G+ +DV V + +
Sbjct: 562 VIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSM 621
Query: 520 VDRGL 524
G+
Sbjct: 622 RKEGV 626
Score = 191 bits (485), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 132/471 (28%), Positives = 248/471 (52%), Gaps = 68/471 (14%)
Query: 46 FSSYPKSSPTPLLTNQKAFPKTKLQAL------DSIIQDLESSVQNGITVQTETFASLLE 99
SS+ SSP L + + K+KL A+ S+I+ S N I +Q L++
Sbjct: 13 LSSFTDSSPFAKLLD--SCIKSKLSAIYVRYVHASVIK---SGFSNEIFIQNR----LID 63
Query: 100 TCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLIDEAHQVFDQMSNRTAFA 159
+ ++E G ++ +P + + + L +L G +DEA +F M R
Sbjct: 64 AYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL----GFLDEADSLFRSMPERDQCT 119
Query: 160 FPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKACAGLGLIRVGEKVHLD 219
WNS++SG+A+ E+A+ + M +EG ++++F VL AC+GL + G +VH
Sbjct: 120 --WNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSL 177
Query: 220 AVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISYNSMLTGYIHHGLLVEA 279
+ F D ++ +ALVDMY+KCG++ A+ VFD +G+++++S+NS++T + +G VEA
Sbjct: 178 IAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEA 237
Query: 280 FDIFRGMILNGFDPDPVAISSIL---ANASLLRIGAQVHGWVLRRG-VEWDLCIANSLIV 335
D+F+ M+ + +PD V ++S++ A+ S +++G +VHG V++ + D+ ++N+ +
Sbjct: 238 LDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVD 297
Query: 336 VYSKDGKLDQACWLFDHMP-------------------------------QKDVVSWNSI 364
+Y+K ++ +A ++FD MP +++VVSWN++
Sbjct: 298 MYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNAL 357
Query: 365 IHAHSK---DHEALIYFEQMERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYG 421
I +++ + EAL F ++R+ V P H +F ++L ACA L + +G + V V K+G
Sbjct: 358 IAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAH-VHVLKHG 416
Query: 422 ISPRVEHY------ACMVNLYGRAGLIDEAYSMIVEKMEFEASPVVWGALL 466
+ ++++Y + G ++E Y ++ KM E V W A++
Sbjct: 417 FKFQSGEEDDIFVGNSLIDMYVKCGCVEEGY-LVFRKM-MERDCVSWNAMI 465
Score = 72.4 bits (176), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 97/214 (45%), Gaps = 39/214 (18%)
Query: 314 VHGWVLRRGVEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHA------ 367
VH V++ G ++ I N LI YSK G L+ +FD MPQ+++ +WNS++
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 368 ----------------------------HSKDHEALIYFEQMERDGVLPDHLTFVSLLSA 399
H + EAL YF M ++G + + +F S+LSA
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 400 CAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVNLYGRAGLIDEAYSMIVEKMEFEASP 459
C+ L + G ++ S++ + +S V + +V++Y + G +++A + E + +
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSD-VYIGSALVDMYSKCGNVNDAQRVFDEMG--DRNV 218
Query: 460 VVWGALLYACYLHGNVCMGETAAQKLFE--LEPD 491
V W +L+ +G Q + E +EPD
Sbjct: 219 VSWNSLITCFEQNGPAVEALDVFQMMLESRVEPD 252
>sp|Q9CA56|PP121_ARATH Pentatricopeptide repeat-containing protein At1g74600,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E69 PE=2
SV=1
Length = 895
Score = 274 bits (700), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 157/451 (34%), Positives = 249/451 (55%), Gaps = 16/451 (3%)
Query: 83 VQNGITVQTETFASLLET--CYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFG 140
+Q G+ + SLL C L HG L + +L + S L LY+ G
Sbjct: 445 LQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLT-----VGSSLFTLYSKCG 499
Query: 141 LIDEAHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRV 200
++E++++F + + W S+ISG+ E G +AI L+ +M ++G PD+ T V
Sbjct: 500 SLEESYKLFQGIPFKDNAC--WASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAV 557
Query: 201 LKACAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDL 260
L C+ + G+++H +R G + +ALV+MY+KCG + AR V+DR+ D
Sbjct: 558 LTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDP 617
Query: 261 ISYNSMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSILANASL---LRIGAQVHGW 317
+S +S+++GY HGL+ + F +FR M+++GF D AISSIL A+L +GAQVH +
Sbjct: 618 VSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAY 677
Query: 318 VLRRGVEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHA---HSKDHEA 374
+ + G+ + + +SL+ +YSK G +D C F + D+++W ++I + H K +EA
Sbjct: 678 ITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEA 737
Query: 375 LIYFEQMERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVN 434
L + M+ G PD +TFV +LSAC+H G V+ + MV+ YGI P HY CMV+
Sbjct: 738 LQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVD 797
Query: 435 LYGRAGLIDEAYSMIVEKMEFEASPVVWGALLYACYLHGNVCMGETAAQKLFELEPDNEH 494
GR+G + EA S I M + +VWG LL AC +HG V +G+ AA+K ELEP +
Sbjct: 798 ALGRSGRLREAESFI-NNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAG 856
Query: 495 NFELLIKIYGNAGRLDDVERVERMLVDRGLE 525
+ L I G D+VE +++ G++
Sbjct: 857 AYISLSNILAEVGEWDEVEETRKLMKGTGVQ 887
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 196/388 (50%), Gaps = 16/388 (4%)
Query: 93 TFASLLETCYQLKAVEHG-IKLHRLIPTNLLRKNKGISSKLLRLYATFGLIDEAHQVFDQ 151
T++S+L C L+ + G + R+I ++ + + ++ LYA G + EA +VF +
Sbjct: 253 TYSSVLAACASLEKLRFGKVVQARVIKCG--AEDVFVCTAIVDLYAKCGHMAEAMEVFSR 310
Query: 152 MSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKACAGLGLIR 211
+ N + + W ++SGY + + A+ ++ +M GVE + T V+ AC ++
Sbjct: 311 IPNPSVVS--WTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVC 368
Query: 212 VGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVF---DRIGNKDLISYNSMLT 268
+VH + GF D V AL+ MY+K GDI + VF D I ++++ N M+T
Sbjct: 369 EASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMIT 426
Query: 269 GYIHHGLLVEAFDIFRGMILNGFDPDPVAISSILANASLLRIGAQVHGWVLRRGVEWDLC 328
+ +A +F M+ G D ++ S+L+ L +G QVHG+ L+ G+ DL
Sbjct: 427 SFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLT 486
Query: 329 IANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAHSKD---HEALIYFEQMERDG 385
+ +SL +YSK G L+++ LF +P KD W S+I ++ EA+ F +M DG
Sbjct: 487 VGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDG 546
Query: 386 VLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVNLYGRAGLIDEA 445
PD T ++L+ C+ S+ G+ + + + GI ++ + +VN+Y + G + A
Sbjct: 547 TSPDESTLAAVLTVCSSHPSLPRGKEIHGYTL-RAGIDKGMDLGSALVNMYSKCGSLKLA 605
Query: 446 YSMIVEKMEFEASPVVWGALLYACYLHG 473
+ +++ E PV +L+ HG
Sbjct: 606 -RQVYDRLP-ELDPVSCSSLISGYSQHG 631
Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 174/344 (50%), Gaps = 15/344 (4%)
Query: 111 IKLHRLIPTNLLRK-----NKGISSKLLRLYATFGLIDEAHQVFDQMSNRTAFAFPWNSL 165
++ +++ +LLR+ + ++ LL Y+ G + +A ++FD + + N +
Sbjct: 64 LRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVS--CNIM 121
Query: 166 ISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKACAGLGLIRVGEKVHLDAVRFGF 225
ISGY + +E+++ + +M G E ++ ++ V+ AC+ L E V ++ G+
Sbjct: 122 ISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGY 181
Query: 226 GFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISYNSMLTGYIHHGLLVEAFDIFRG 285
F V +AL+D+++K A VF + ++ +N+++ G + + FD+F
Sbjct: 182 FFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHE 241
Query: 286 MILNGFDPDPVAISSILAN-ASL--LRIGAQVHGWVLRRGVEWDLCIANSLIVVYSKDGK 342
M + PD SS+LA ASL LR G V V++ G E D+ + +++ +Y+K G
Sbjct: 242 MCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGH 300
Query: 343 LDQACWLFDHMPQKDVVSWNSIIHAHSKDHE---ALIYFEQMERDGVLPDHLTFVSLLSA 399
+ +A +F +P VVSW ++ ++K ++ AL F++M GV ++ T S++SA
Sbjct: 301 MAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISA 360
Query: 400 CAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVNLYGRAGLID 443
C V ++ + V K G A ++++Y ++G ID
Sbjct: 361 CGRPSMVCEASQVHA-WVFKSGFYLDSSVAAALISMYSKSGDID 403
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 272 bits (695), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 165/514 (32%), Positives = 270/514 (52%), Gaps = 62/514 (12%)
Query: 65 PKTKLQALDSIIQDLESSVQNGITVQTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRK 124
PK L+ + + G T ++L C L G +LH T+ + +
Sbjct: 209 PKVALEMFSRMTNEF------GCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQ 262
Query: 125 NKGISSKLLRLYATFGLIDEAHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQ 184
N + + L+ +YA G++DEA+ VF MS + + WN++++GY+++G +EDA+ L+ +
Sbjct: 263 NMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVS--WNAMVAGYSQIGRFEDAVRLFEK 320
Query: 185 MEEE-----------------------------------GVEPDQFTFPRVLKACAGLGL 209
M+EE G++P++ T VL CA +G
Sbjct: 321 MQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGA 380
Query: 210 IRVGEKVHLDAVRF-------GFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNK--DL 260
+ G+++H A+++ G G + V+N L+DMYAKC + AR +FD + K D+
Sbjct: 381 LMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDV 440
Query: 261 ISYNSMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAIS---SILANASL--LRIGAQVH 315
+++ M+ GY HG +A ++ M P A + +++A ASL LRIG Q+H
Sbjct: 441 VTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIH 500
Query: 316 GWVLRRGVEW-DLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHA---HSKD 371
+ LR L ++N LI +Y+K G + A +FD+M K+ V+W S++ H
Sbjct: 501 AYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYG 560
Query: 372 HEALIYFEQMERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYAC 431
EAL F++M R G D +T + +L AC+H G + G F+ M +G+SP EHYAC
Sbjct: 561 EEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYAC 620
Query: 432 MVNLYGRAGLIDEAYSMIVEKMEFEASPVVWGALLYACYLHGNVCMGETAAQKLFELEPD 491
+V+L GRAG ++ A +I E+M E PVVW A L C +HG V +GE AA+K+ EL +
Sbjct: 621 LVDLLGRAGRLNAALRLI-EEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASN 679
Query: 492 NEHNFELLIKIYGNAGRLDDVERVERMLVDRGLE 525
++ ++ LL +Y NAGR DV R+ ++ +G++
Sbjct: 680 HDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVK 713
Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 138/521 (26%), Positives = 235/521 (45%), Gaps = 93/521 (17%)
Query: 88 TVQTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLIDEAHQ 147
T TF + + C ++ +V G H L N + + L+ +Y+ + +A +
Sbjct: 124 TPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARK 183
Query: 148 VFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEE-GVEPDQFTFPRVLKACAG 206
VFD+MS + WNS+I YA+LG+ + A+ ++ +M E G PD T VL CA
Sbjct: 184 VFDEMSVWDVVS--WNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCAS 241
Query: 207 LGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISYNSM 266
LG +G+++H AV + FV N LVDMYAKCG + +A TVF + KD++S+N+M
Sbjct: 242 LGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAM 301
Query: 267 -----------------------------------LTGYIHHGLLVEAFDIFRGMILNGF 291
++GY GL EA + R M+ +G
Sbjct: 302 VAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGI 361
Query: 292 DPDPVAISSIL---ANASLLRIGAQVHGWVLRRGVEW-------DLCIANSLIVVYSKDG 341
P+ V + S+L A+ L G ++H + ++ ++ + + N LI +Y+K
Sbjct: 362 KPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCK 421
Query: 342 KLDQACWLFDHMP--QKDVVSWNSIIHAHSKDHEA----LIYFEQMERDG-VLPDHLTFV 394
K+D A +FD + ++DVV+W +I +S+ +A + E E D P+ T
Sbjct: 422 KVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTIS 481
Query: 395 SLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVNLYGRAGLIDEA--------- 445
L ACA L ++++G+++ + + + + C++++Y + G I +A
Sbjct: 482 CALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMA 541
Query: 446 ------------YSM---------IVEKME---FEASPVVWGALLYACYLHGNVCMGE-- 479
Y M I ++M F+ V +LYAC G + G
Sbjct: 542 KNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEY 601
Query: 480 -TAAQKLFELEPDNEHNFELLIKIYGNAGRLDDVER-VERM 518
+ +F + P EH + L+ + G AGRL+ R +E M
Sbjct: 602 FNRMKTVFGVSPGPEH-YACLVDLLGRAGRLNAALRLIEEM 641
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 117/454 (25%), Positives = 202/454 (44%), Gaps = 57/454 (12%)
Query: 91 TETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLIDEAHQVFD 150
T F +T Q+K + +L+ +L N ++S L+ Y + G + A +
Sbjct: 31 TPPFIHKCKTISQVKLIHQ-----KLLSFGILTLN--LTSHLISTYISVGCLSHAVSLLR 83
Query: 151 QMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKACAGLGLI 210
+ A + WNSLI Y + G + L+ M PD +TFP V KAC + +
Sbjct: 84 RFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSV 143
Query: 211 RVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISYNSMLTGY 270
R GE H ++ GF + FV NALV MY++C + AR VFD + D++S+NS++ Y
Sbjct: 144 RCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESY 203
Query: 271 IHHGLLVEAFDIFRGMILN-GFDPDPVAISSILANASLL---RIGAQVHGWVLRRGVEWD 326
G A ++F M G PD + + ++L + L +G Q+H + + + +
Sbjct: 204 AKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQN 263
Query: 327 LCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAHSK---------------- 370
+ + N L+ +Y+K G +D+A +F +M KDVVSWN+++ +S+
Sbjct: 264 MFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQE 323
Query: 371 ----------------------DHEALIYFEQMERDGVLPDHLTFVSLLSACAHLGSVKV 408
+EAL QM G+ P+ +T +S+LS CA +G++
Sbjct: 324 EKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMH 383
Query: 409 GERLFSVMVEKYGISPRVEHYA-------CMVNLYGRAGLIDEAYSMIVEKMEFEASPVV 461
G+ + + KY I R + ++++Y + +D A +M E V
Sbjct: 384 GKEIHCYAI-KYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVT 442
Query: 462 WGALLYACYLHGNVCMGETAAQKLFELEPDNEHN 495
W ++ HG+ ++FE + N
Sbjct: 443 WTVMIGGYSQHGDANKALELLSEMFEEDCQTRPN 476
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 271 bits (694), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 157/501 (31%), Positives = 280/501 (55%), Gaps = 28/501 (5%)
Query: 37 QISRNRITTFSSYPKSSPTPLLTN------QKAFPKTKLQALDSIIQDLESSVQNGITVQ 90
++ R +T SY + T LL+ Q+ P+ ++A+DS+ +G+
Sbjct: 9 KLFRPVVTLRCSYSSTDQTLLLSEFTRLCYQRDLPRA-MKAMDSL-------QSHGLWAD 60
Query: 91 TETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLIDEAHQVFD 150
+ T++ L++ C +AV G + R + N R + + L+ +Y F L+++AHQ+FD
Sbjct: 61 SATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFD 120
Query: 151 QMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKACAGLGLI 210
QM R + W ++IS Y++ ++ A+ L M + V P+ +T+ VL++C G+ +
Sbjct: 121 QMPQRNVIS--WTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV 178
Query: 211 RVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISYNSMLTGY 270
R+ +H ++ G D FV +AL+D++AK G+ A +VFD + D I +NS++ G+
Sbjct: 179 RM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGF 235
Query: 271 IHHGLLVEAFDIFRGMILNGFDPDPVAISSIL---ANASLLRIGAQVHGWVLRRGVEWDL 327
+ A ++F+ M GF + ++S+L +LL +G Q H +++ + DL
Sbjct: 236 AQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDL 293
Query: 328 CIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAHSKD---HEALIYFEQMERD 384
+ N+L+ +Y K G L+ A +F+ M ++DV++W+++I +++ EAL FE+M+
Sbjct: 294 ILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSS 353
Query: 385 GVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVNLYGRAGLIDE 444
G P+++T V +L AC+H G ++ G F M + YGI P EHY CM++L G+AG +D+
Sbjct: 354 GTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDD 413
Query: 445 AYSMIVEKMEFEASPVVWGALLYACYLHGNVCMGETAAQKLFELEPDNEHNFELLIKIYG 504
A ++ E ME E V W LL AC + N+ + E AA+K+ L+P++ + LL IY
Sbjct: 414 AVKLLNE-MECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYA 472
Query: 505 NAGRLDDVERVERMLVDRGLE 525
N+ + D VE + + DRG++
Sbjct: 473 NSQKWDSVEEIRTRMRDRGIK 493
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 268 bits (686), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 146/469 (31%), Positives = 258/469 (55%), Gaps = 40/469 (8%)
Query: 93 TFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLIDEAHQVFDQM 152
+F +L+ ++ A+ G++LH + + + + + +YA+ G I+ A VFD+M
Sbjct: 113 SFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEM 172
Query: 153 SNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKACAGLGLIRV 212
S+R WN++I Y G ++A L+ +M++ V PD+ ++ AC G +R
Sbjct: 173 SHRDVVT--WNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRY 230
Query: 213 GEKVHLDAVRFGFGFDGFVLNALVDMYA-------------------------------K 241
++ + D +L ALV MYA K
Sbjct: 231 NRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSK 290
Query: 242 CGDIVKARTVFDRIGNKDLISYNSMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSI 301
CG + A+ +FD+ KDL+ + +M++ Y+ EA +F M +G PD V++ S+
Sbjct: 291 CGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSV 350
Query: 302 L---ANASLLRIGAQVHGWVLRRGVEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQKDV 358
+ AN +L VH + G+E +L I N+LI +Y+K G LD +F+ MP+++V
Sbjct: 351 ISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNV 410
Query: 359 VSWNSIIHA---HSKDHEALIYFEQMERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSV 415
VSW+S+I+A H + +AL F +M+++ V P+ +TFV +L C+H G V+ G+++F+
Sbjct: 411 VSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFAS 470
Query: 416 MVEKYGISPRVEHYACMVNLYGRAGLIDEAYSMIVEKMEFEASPVVWGALLYACYLHGNV 475
M ++Y I+P++EHY CMV+L+GRA L+ EA ++E M ++ V+WG+L+ AC +HG +
Sbjct: 471 MTDEYNITPKLEHYGCMVDLFGRANLLREALE-VIESMPVASNVVIWGSLMSACRIHGEL 529
Query: 476 CMGETAAQKLFELEPDNEHNFELLIKIYGNAGRLDDVERVERMLVDRGL 524
+G+ AA+++ ELEPD++ L+ IY R +DV + R++ ++ +
Sbjct: 530 ELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNV 578
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 168/349 (48%), Gaps = 40/349 (11%)
Query: 162 WNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKACAGLGLIRVGEKVHLDAV 221
+N + + E I Y ++ G DQF+F +LKA + + + G ++H A
Sbjct: 79 FNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAF 138
Query: 222 RFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISYNSMLTGYIHHGLLVEAFD 281
+ D FV +DMYA CG I AR VFD + ++D++++N+M+ Y GL+ EAF
Sbjct: 139 KIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFK 198
Query: 282 IFRGMILNGFDPDPVAISSILANASL---LRIGAQVHGWVLRRGVEWD------------ 326
+F M + PD + + +I++ +R ++ +++ V D
Sbjct: 199 LFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYA 258
Query: 327 -------------------LCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHA 367
L ++ +++ YSK G+LD A +FD +KD+V W ++I A
Sbjct: 259 GAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISA 318
Query: 368 HSKD---HEALIYFEQMERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISP 424
+ + EAL FE+M G+ PD ++ S++SACA+LG + + + S + G+
Sbjct: 319 YVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSC-IHVNGLES 377
Query: 425 RVEHYACMVNLYGRAGLIDEAYSMIVEKMEFEASPVVWGALLYACYLHG 473
+ ++N+Y + G +D A + EKM + V W +++ A +HG
Sbjct: 378 ELSINNALINMYAKCGGLD-ATRDVFEKMP-RRNVVSWSSMINALSMHG 424
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 73/138 (52%), Gaps = 2/138 (1%)
Query: 79 LESSVQNGITVQTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYAT 138
E +GI + S++ C L ++ +H I N L I++ L+ +YA
Sbjct: 332 FEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAK 391
Query: 139 FGLIDEAHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFP 198
G +D VF++M R + W+S+I+ + GE DA++L+ +M++E VEP++ TF
Sbjct: 392 CGGLDATRDVFEKMPRRNVVS--WSSMINALSMHGEASDALSLFARMKQENVEPNEVTFV 449
Query: 199 RVLKACAGLGLIRVGEKV 216
VL C+ GL+ G+K+
Sbjct: 450 GVLYGCSHSGLVEEGKKI 467
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 268 bits (686), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 159/453 (35%), Positives = 257/453 (56%), Gaps = 14/453 (3%)
Query: 82 SVQNGI-TVQTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFG 140
++ NG+ + + T SLL C + G+ +H + L +S+KL+ LYA FG
Sbjct: 237 TLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFG 296
Query: 141 LIDEAHQVFDQMSNRTAFAFPWNSLISGYAELGEYE-DAIALYFQMEEEGVEPDQFTFPR 199
+ + +VFD+M R + WNS+I Y EL E AI+L+ +M ++PD T
Sbjct: 297 RLRDCQKVFDRMYVRDLIS--WNSIIKAY-ELNEQPLRAISLFQEMRLSRIQPDCLTLIS 353
Query: 200 VLKACAGLGLIRVGEKVHLDAVRFGFGFDGFVL-NALVDMYAKCGDIVKARTVFDRIGNK 258
+ + LG IR V +R G+ + + NA+V MYAK G + AR VF+ + N
Sbjct: 354 LASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNT 413
Query: 259 DLISYNSMLTGYIHHGLLVEAFDIFRGMILNG----FDPDPVAISSILANASLLRIGAQV 314
D+IS+N++++GY +G EA +++ M G V++ + A LR G ++
Sbjct: 414 DVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKL 473
Query: 315 HGWVLRRGVEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAHS---KD 371
HG +L+ G+ D+ + SL +Y K G+L+ A LF +P+ + V WN++I H
Sbjct: 474 HGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHG 533
Query: 372 HEALIYFEQMERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYAC 431
+A++ F++M +GV PDH+TFV+LLSAC+H G V G+ F +M YGI+P ++HY C
Sbjct: 534 EKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGC 593
Query: 432 MVNLYGRAGLIDEAYSMIVEKMEFEASPVVWGALLYACYLHGNVCMGETAAQKLFELEPD 491
MV++YGRAG ++ A I + M + +WGALL AC +HGNV +G+ A++ LFE+EP+
Sbjct: 594 MVDMYGRAGQLETALKFI-KSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPE 652
Query: 492 NEHNFELLIKIYGNAGRLDDVERVERMLVDRGL 524
+ LL +Y +AG+ + V+ + + +GL
Sbjct: 653 HVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGL 685
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 142/522 (27%), Positives = 243/522 (46%), Gaps = 71/522 (13%)
Query: 42 RITTFSSYPKSSPTPLLTNQKAFPKTKLQALDSIIQDLESSV-------QNGI-TVQTET 93
+ TFS P+ PT F + LQ++ S+I++ +S +NG + + +
Sbjct: 2 KFGTFS-LPRQIPT---CKGGRFTRV-LQSIGSVIREFSASANALQDCWKNGNESKEIDD 56
Query: 94 FASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLIDEAHQVFDQMS 153
+L C L++ + LH + + +N IS+KL+ LY G + A FD +
Sbjct: 57 VHTLFRYCTNLQSAK---CLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQ 113
Query: 154 NRTAFAFPWNSLISGYAELGEYEDAIALY-FQMEEEGVEPDQFTFPRVLKACAGLGLIRV 212
NR +A WN +ISGY G + I + M G+ PD TFP VLKAC +
Sbjct: 114 NRDVYA--WNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR---TVID 168
Query: 213 GEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISYNSMLTGYIH 272
G K+H A++FGF +D +V +L+ +Y++ + AR +FD + +D+ S+N+M++GY
Sbjct: 169 GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQ 228
Query: 273 HGLLVEAFDIFRGMILNGFDP-DPVAISSILANASLLRIGAQVHGWVLRRGVEWDLCIAN 331
G EA + G L D V++ S A G +H + ++ G+E +L ++N
Sbjct: 229 SGNAKEALTLSNG--LRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSN 286
Query: 332 SLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAHSKDHE---ALIYFEQMERDGVLP 388
LI +Y++ G+L +FD M +D++SWNSII A+ + + A+ F++M + P
Sbjct: 287 KLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQP 346
Query: 389 DHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVNLYGRAGLIDEA--- 445
D LT +SL S + LG ++ + + K + +V +Y + GL+D A
Sbjct: 347 DCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAV 406
Query: 446 -------------------------------YSMIVEKMEFEASPVVWGALLYACYLHGN 474
Y+++ E+ E A+ W ++L AC G
Sbjct: 407 FNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGA 466
Query: 475 VCMGETAAQKLFELEPDNEHNFELLI-----KIYGNAGRLDD 511
+ G +L + N ++ + +YG GRL+D
Sbjct: 467 LRQGMKLHGRLLK----NGLYLDVFVVTSLADMYGKCGRLED 504
>sp|Q9LUL5|PP229_ARATH Pentatricopeptide repeat-containing protein At3g14330
OS=Arabidopsis thaliana GN=PCMP-H57 PE=2 SV=2
Length = 710
Score = 268 bits (686), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 158/468 (33%), Positives = 261/468 (55%), Gaps = 10/468 (2%)
Query: 67 TKLQALDSIIQDLESSVQNGITVQT-ETFASLLETCYQLKAVEHGIKLHRLIPTN-LLRK 124
+K LD + +E+S + + T E + LL C K++ HGIK+ LI N LR
Sbjct: 106 SKSTKLDEAVTLIENSSSSPSNLSTPEAYTDLLHACISAKSLHHGIKICSLILNNPSLRH 165
Query: 125 NKGISSKLLRLYATFGLIDEAHQVFDQMSNRTAFAFP-WNSLISGYAELGEYEDAIALYF 183
N + SKL+ L++ +D A ++FD +++ + W ++ GY+ G DA+ +Y
Sbjct: 166 NPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYV 225
Query: 184 QMEEEGVEPDQFTFPRVLKACAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCG 243
M +EP F+ LKAC L +RVG +H V+ D V N L+ +Y + G
Sbjct: 226 DMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESG 285
Query: 244 DIVKARTVFDRIGNKDLISYNSMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSILA 303
AR VFD + ++++++NS+++ + E F++FR M +++IL
Sbjct: 286 LFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILP 345
Query: 304 NAS---LLRIGAQVHGWVLRRGVEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVS 360
S L G ++H +L+ + D+ + NSL+ +Y K G+++ + +FD M KD+ S
Sbjct: 346 ACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLAS 405
Query: 361 WNSIIHAHSKD---HEALIYFEQMERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMV 417
WN +++ ++ + E + FE M GV PD +TFV+LLS C+ G + G LF M
Sbjct: 406 WNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMK 465
Query: 418 EKYGISPRVEHYACMVNLYGRAGLIDEAYSMIVEKMEFEASPVVWGALLYACYLHGNVCM 477
++ +SP +EHYAC+V++ GRAG I EA ++E M F+ S +WG+LL +C LHGNV +
Sbjct: 466 TEFRVSPALEHYACLVDILGRAGKIKEAVK-VIETMPFKPSASIWGSLLNSCRLHGNVSV 524
Query: 478 GETAAQKLFELEPDNEHNFELLIKIYGNAGRLDDVERVERMLVDRGLE 525
GE AA++LF LEP N N+ ++ IY +A D+V+++ M+ RG++
Sbjct: 525 GEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVK 572
>sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350
OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1
Length = 677
Score = 268 bits (685), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 163/452 (36%), Positives = 242/452 (53%), Gaps = 13/452 (2%)
Query: 83 VQNGITVQTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLI 142
V + + T S+L C LK +E G +H+L+ L + + L+ +Y G +
Sbjct: 210 VNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRM 269
Query: 143 DEAHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLK 202
DEA VFD+M R W +I+GY E G+ E+A+ L M+ EGV P+ T ++
Sbjct: 270 DEARFVFDRMERRDVIT--WTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVS 327
Query: 203 ACAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLIS 262
C + G+ +H AVR D + +L+ MYAKC + VF
Sbjct: 328 VCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGP 387
Query: 263 YNSMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSIL-ANASL--LRIGAQVHGWVL 319
+++++ G + + L+ +A +F+ M +P+ ++S+L A A+L LR +H ++
Sbjct: 388 WSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLT 447
Query: 320 RRGVEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQK----DVVSWNSIIHA---HSKDH 372
+ G L A L+ VYSK G L+ A +F+ + +K DVV W ++I H H
Sbjct: 448 KTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGH 507
Query: 373 EALIYFEQMERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACM 432
AL F +M R GV P+ +TF S L+AC+H G V+ G LF M+E Y R HY C+
Sbjct: 508 NALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCI 567
Query: 433 VNLYGRAGLIDEAYSMIVEKMEFEASPVVWGALLYACYLHGNVCMGETAAQKLFELEPDN 492
V+L GRAG +DEAY++I + FE + VWGALL AC H NV +GE AA KLFELEP+N
Sbjct: 568 VDLLGRAGRLDEAYNLIT-TIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPEN 626
Query: 493 EHNFELLIKIYGNAGRLDDVERVERMLVDRGL 524
N+ LL IY GR D+E+V M+ + GL
Sbjct: 627 TGNYVLLANIYAALGRWKDMEKVRSMMENVGL 658
Score = 169 bits (427), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 202/393 (51%), Gaps = 14/393 (3%)
Query: 85 NGITVQTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLIDE 144
N + + SLL +++ LH + T R + I S L YA G I
Sbjct: 9 NNALSSVKQYQSLLNHFAATQSISKTKALHCHVITGG-RVSGHILSTLSVTYALCGHITY 67
Query: 145 AHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVE--PDQFTFPRVLK 202
A ++F++M + ++ N +I Y G Y DAI+++ +M EGV+ PD +T+P V K
Sbjct: 68 ARKLFEEMPQSSLLSY--NIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAK 125
Query: 203 ACAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLIS 262
A L +++G VH +R FG D +V NAL+ MY G + AR VFD + N+D+IS
Sbjct: 126 AAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVIS 185
Query: 263 YNSMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSILANASLLR---IGAQVHGWVL 319
+N+M++GY +G + +A +F M+ D D I S+L L+ +G VH V
Sbjct: 186 WNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVE 245
Query: 320 RRGVEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAHSKD---HEALI 376
+ + + + N+L+ +Y K G++D+A ++FD M ++DV++W +I+ +++D AL
Sbjct: 246 EKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALE 305
Query: 377 YFEQMERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVNLY 436
M+ +GV P+ +T SL+S C V G+ L V + S + + ++++Y
Sbjct: 306 LCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETS-LISMY 364
Query: 437 GRAGLIDEAYSMIVEKMEFEASPVVWGALLYAC 469
+ +D + + ++ P W A++ C
Sbjct: 365 AKCKRVDLCFRVFSGASKYHTGP--WSAIIAGC 395
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 268 bits (685), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 166/511 (32%), Positives = 260/511 (50%), Gaps = 75/511 (14%)
Query: 83 VQNGITVQTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLI 142
V+ GI T ++L + + +E G K+H I LR N +S+ LL +YA G
Sbjct: 138 VKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDP 197
Query: 143 DEAHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGV------------ 190
A VFD+M R + WN++I+ + ++G+ + A+A + QM E +
Sbjct: 198 MMAKFVFDRMVVRDISS--WNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQ 255
Query: 191 --------------------EPDQFTFPRVLKACAGLGLIRVGEKVHLDAVRFGFGFDGF 230
PD+FT VL ACA L + +G+++H V GF G
Sbjct: 256 RGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGI 315
Query: 231 VLNALVDMYAKCGDIVKARTVFDRIGNKDL------------------------------ 260
VLNAL+ MY++CG + AR + ++ G KDL
Sbjct: 316 VLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKD 375
Query: 261 ---ISYNSMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSILANASLLRI---GAQV 314
+++ +M+ GY HG EA ++FR M+ G P+ ++++L+ AS L G Q+
Sbjct: 376 RDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQI 435
Query: 315 HGWVLRRGVEWDLCIANSLIVVYSKDGKLDQACWLFDHMP-QKDVVSWNSIIHA---HSK 370
HG ++ G + + ++N+LI +Y+K G + A FD + ++D VSW S+I A H
Sbjct: 436 HGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGH 495
Query: 371 DHEALIYFEQMERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYA 430
EAL FE M +G+ PDH+T+V + SAC H G V G + F +M + I P + HYA
Sbjct: 496 AEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYA 555
Query: 431 CMVNLYGRAGLIDEAYSMIVEKMEFEASPVVWGALLYACYLHGNVCMGETAAQKLFELEP 490
CMV+L+GRAGL+ EA I EKM E V WG+LL AC +H N+ +G+ AA++L LEP
Sbjct: 556 CMVDLFGRAGLLQEAQEFI-EKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEP 614
Query: 491 DNEHNFELLIKIYGNAGRLDDVERVERMLVD 521
+N + L +Y G+ ++ ++ + + D
Sbjct: 615 ENSGAYSALANLYSACGKWEEAAKIRKSMKD 645
Score = 148 bits (374), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 122/438 (27%), Positives = 197/438 (44%), Gaps = 85/438 (19%)
Query: 132 LLRLYATFGLIDEAHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVE 191
+L Y+ G +D + FDQ+ R + + W ++I GY +G+Y AI + M +EG+E
Sbjct: 86 VLSAYSKRGDMDSTCEFFDQLPQRDSVS--WTTMIVGYKNIGQYHKAIRVMGDMVKEGIE 143
Query: 192 PDQFTFPRVLKACAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTV 251
P QFT VL + A + G+KVH V+ G + V N+L++MYAKCGD + A+ V
Sbjct: 144 PTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFV 203
Query: 252 FDR-------------------------------IGNKDLISYNSMLTGYIHHGLLVEAF 280
FDR + +D++++NSM++G+ G + A
Sbjct: 204 FDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRAL 263
Query: 281 DIFRGMILNG-FDPDPVAISSIL---ANASLLRIGAQVHGWVLRRGVEWDLCIANSLIVV 336
DIF M+ + PD ++S+L AN L IG Q+H ++ G + + N+LI +
Sbjct: 264 DIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISM 323
Query: 337 YS---------------------------------KDGKLDQACWLFDHMPQKDVVSWNS 363
YS K G ++QA +F + +DVV+W +
Sbjct: 324 YSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTA 383
Query: 364 II---HAHSKDHEALIYFEQMERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKY 420
+I H EA+ F M G P+ T ++LS + L S+ G+++ V K
Sbjct: 384 MIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAV-KS 442
Query: 421 GISPRVEHYACMVNLYGRAGLIDEAYSMIVEKMEFEASPVVWGALLYACYLHGNVCMGET 480
G V ++ +Y +AG I A S + + E V W +++ A HG+
Sbjct: 443 GEIYSVSVSNALITMYAKAGNITSA-SRAFDLIRCERDTVSWTSMIIALAQHGHA----E 497
Query: 481 AAQKLFE------LEPDN 492
A +LFE L PD+
Sbjct: 498 EALELFETMLMEGLRPDH 515
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 133/263 (50%), Gaps = 41/263 (15%)
Query: 229 GFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISYNSMLTGYIHHGLLVEAFDIFRGMIL 288
F N ++ Y+K GD+ FD++ +D +S+ +M+ GY + G +A + M+
Sbjct: 80 AFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVK 139
Query: 289 NGFDPDPVAISSILANASLLR---IGAQVHGWVLRRGVEWDLCIANSLIVVYSKDGKLDQ 345
G +P ++++LA+ + R G +VH ++++ G+ ++ ++NSL+ +Y+K G
Sbjct: 140 EGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMM 199
Query: 346 ACWLFDHMPQKDVVSWNSIIHAHSK----------------------------------D 371
A ++FD M +D+ SWN++I H + D
Sbjct: 200 AKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYD 259
Query: 372 HEALIYFEQMERDGVL-PDHLTFVSLLSACAHLGSVKVGERLFS-VMVEKYGISPRVEHY 429
AL F +M RD +L PD T S+LSACA+L + +G+++ S ++ + IS V +
Sbjct: 260 LRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLN- 318
Query: 430 ACMVNLYGRAGLIDEAYSMIVEK 452
++++Y R G ++ A +I ++
Sbjct: 319 -ALISMYSRCGGVETARRLIEQR 340
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 158/347 (45%), Gaps = 47/347 (13%)
Query: 60 NQKAFPKTKLQALDSIIQDLESSVQNGITVQTETFASLLETCYQLKAVEHGIKLHRLIPT 119
NQ+ + L+ALD + L S+ ++ T AS+L C L+ + G ++H I T
Sbjct: 254 NQRGYD---LRALDIFSKMLRDSL---LSPDRFTLASVLSACANLEKLCIGKQIHSHIVT 307
Query: 120 NLLRKNKGISSKLLRLYATFGLIDEAHQVFDQMSNRTAFAFPWNSLISGYAELGE----- 174
+ + + L+ +Y+ G ++ A ++ +Q + + +L+ GY +LG+
Sbjct: 308 TGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAK 367
Query: 175 --------------------------YEDAIALYFQMEEEGVEPDQFTFPRVLKACAGLG 208
Y +AI L+ M G P+ +T +L + L
Sbjct: 368 NIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLA 427
Query: 209 LIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRI-GNKDLISYNSML 267
+ G+++H AV+ G + V NAL+ MYAK G+I A FD I +D +S+ SM+
Sbjct: 428 SLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMI 487
Query: 268 TGYIHHGLLVEAFDIFRGMILNGFDPDP---VAISSILANASLLRIGAQVHGWVLRRGVE 324
HG EA ++F M++ G PD V + S +A L+ G Q + + + V+
Sbjct: 488 IALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQY--FDMMKDVD 545
Query: 325 W---DLCIANSLIVVYSKDGKLDQACWLFDHMP-QKDVVSWNSIIHA 367
L ++ ++ + G L +A + MP + DVV+W S++ A
Sbjct: 546 KIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSA 592
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 46/193 (23%)
Query: 293 PDPVAISSIL----------ANASLLRIGAQ-VHGWVLRRGVEWDLCIANSLIVVYSKDG 341
P P+++S++L N S R AQ VH V++ G+ + + + N+L+ VYSK G
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 342 KLDQACWLFDHMPQKDVVSWNSIIHAHSKD------------------------------ 371
A LFD MP + SWN+++ A+SK
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 123
Query: 372 ----HEALIYFEQMERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVE 427
H+A+ M ++G+ P T ++L++ A ++ G+++ S +V K G+ V
Sbjct: 124 IGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIV-KLGLRGNVS 182
Query: 428 HYACMVNLYGRAG 440
++N+Y + G
Sbjct: 183 VSNSLLNMYAKCG 195
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 267 bits (683), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 144/389 (37%), Positives = 235/389 (60%), Gaps = 10/389 (2%)
Query: 145 AHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEG-VEPDQFTFPRVLKA 203
AH+VF ++ + F WN+LI GYAE+G A +LY +M G VEPD T+P ++KA
Sbjct: 72 AHKVFSKI-EKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKA 130
Query: 204 CAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISY 263
+ +R+GE +H +R GFG +V N+L+ +YA CGD+ A VFD++ KDL+++
Sbjct: 131 VTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAW 190
Query: 264 NSMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSIL---ANASLLRIGAQVHGWVLR 320
NS++ G+ +G EA ++ M G PD I S+L A L +G +VH ++++
Sbjct: 191 NSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK 250
Query: 321 RGVEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAHSKD---HEALIY 377
G+ +L +N L+ +Y++ G++++A LFD M K+ VSW S+I + + EA+
Sbjct: 251 VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIEL 310
Query: 378 FEQMER-DGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVNLY 436
F+ ME +G+LP +TFV +L AC+H G VK G F M E+Y I PR+EH+ CMV+L
Sbjct: 311 FKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLL 370
Query: 437 GRAGLIDEAYSMIVEKMEFEASPVVWGALLYACYLHGNVCMGETAAQKLFELEPDNEHNF 496
RAG + +AY I + M + + V+W LL AC +HG+ + E A ++ +LEP++ ++
Sbjct: 371 ARAGQVKKAYEYI-KSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDY 429
Query: 497 ELLIKIYGNAGRLDDVERVERMLVDRGLE 525
LL +Y + R DV+++ + ++ G++
Sbjct: 430 VLLSNMYASEQRWSDVQKIRKQMLRDGVK 458
Score = 136 bits (343), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 172/330 (52%), Gaps = 17/330 (5%)
Query: 80 ESSVQNGITVQTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATF 139
E V + T T+ L++ + V G +H ++ + + + LL LYA
Sbjct: 110 EMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANC 169
Query: 140 GLIDEAHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPR 199
G + A++VFD+M + A WNS+I+G+AE G+ E+A+ALY +M +G++PD FT
Sbjct: 170 GDVASAYKVFDKMPEKDLVA--WNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVS 227
Query: 200 VLKACAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKD 259
+L ACA +G + +G++VH+ ++ G + N L+D+YA+CG + +A+T+FD + +K+
Sbjct: 228 LLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKN 287
Query: 260 LISYNSMLTGYIHHGLLVEAFDIFRGM-ILNGFDPDPVAISSILANASLLRIGAQVHGWV 318
+S+ S++ G +G EA ++F+ M G P + IL S + + +
Sbjct: 288 SVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYF 347
Query: 319 LRRGVEWDL--------CIANSLIVVYSKDGKLDQACWLFDHMP-QKDVVSWNSIIHAHS 369
R E+ + C+ + L ++ G++ +A MP Q +VV W +++ A +
Sbjct: 348 RRMREEYKIEPRIEHFGCMVDLL----ARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACT 403
Query: 370 KDHEA-LIYFEQMERDGVLPDHLTFVSLLS 398
++ L F +++ + P+H LLS
Sbjct: 404 VHGDSDLAEFARIQILQLEPNHSGDYVLLS 433
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 266 bits (681), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 139/406 (34%), Positives = 239/406 (58%), Gaps = 8/406 (1%)
Query: 125 NKGISSKLLRLYATFGLIDEAHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQ 184
N+ +++ + YA G + A +VF + ++T + WN+LI G+A+ + ++ + Q
Sbjct: 429 NELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNS--WNALIGGHAQSNDPRLSLDAHLQ 486
Query: 185 MEEEGVEPDQFTFPRVLKACAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGD 244
M+ G+ PD FT +L AC+ L +R+G++VH +R D FV +++ +Y CG+
Sbjct: 487 MKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGE 546
Query: 245 IVKARTVFDRIGNKDLISYNSMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSILAN 304
+ + +FD + +K L+S+N+++TGY+ +G A +FR M+L G +++ +
Sbjct: 547 LCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGA 606
Query: 305 ASLL---RIGAQVHGWVLRRGVEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSW 361
SLL R+G + H + L+ +E D IA SLI +Y+K+G + Q+ +F+ + +K SW
Sbjct: 607 CSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASW 666
Query: 362 NSIIHA---HSKDHEALIYFEQMERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVE 418
N++I H EA+ FE+M+R G PD LTF+ +L+AC H G + G R M
Sbjct: 667 NAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKS 726
Query: 419 KYGISPRVEHYACMVNLYGRAGLIDEAYSMIVEKMEFEASPVVWGALLYACYLHGNVCMG 478
+G+ P ++HYAC++++ GRAG +D+A ++ E+M EA +W +LL +C +H N+ MG
Sbjct: 727 SFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMG 786
Query: 479 ETAAQKLFELEPDNEHNFELLIKIYGNAGRLDDVERVERMLVDRGL 524
E A KLFELEP+ N+ LL +Y G+ +DV +V + + + L
Sbjct: 787 EKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSL 832
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/348 (30%), Positives = 182/348 (52%), Gaps = 17/348 (4%)
Query: 69 LQALDSIIQDLESSVQNGITVQTETFASLLETCYQLKAVEHGIKLHRLIP-TNLLRKNKG 127
+ + + D ESS + V+ E LL+ + K +E G K+H+L+ + LR +
Sbjct: 63 FRTVQEFVGDDESSSDAFLLVR-EALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDV 121
Query: 128 ISSKLLRLYATFGLIDEAHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQM-E 186
+ ++++ +YA G D++ VFD + R+ F WN++IS Y+ Y++ + + +M
Sbjct: 122 LCTRIITMYAMCGSPDDSRFVFDAL--RSKNLFQWNAVISSYSRNELYDEVLETFIEMIS 179
Query: 187 EEGVEPDQFTFPRVLKACAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIV 246
+ PD FT+P V+KACAG+ + +G VH V+ G D FV NALV Y G +
Sbjct: 180 TTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVT 239
Query: 247 KARTVFDRIGNKDLISYNSMLTGYIHHGLLVEAFDIFRGMI-LNG---FDPDPVAISSIL 302
A +FD + ++L+S+NSM+ + +G E+F + M+ NG F PD + ++L
Sbjct: 240 DALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVL 299
Query: 303 ---ANASLLRIGAQVHGWVLRRGVEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVV 359
A + +G VHGW ++ ++ +L + N+L+ +YSK G + A +F K+VV
Sbjct: 300 PVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVV 359
Query: 360 SWNSIIHAHSKD---HEALIYFEQMERDG--VLPDHLTFVSLLSACAH 402
SWN+++ S + H QM G V D +T ++ + C H
Sbjct: 360 SWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFH 407
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 199/415 (47%), Gaps = 25/415 (6%)
Query: 93 TFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLIDEAHQVFDQM 152
T ++L C + + + G +H L K +++ L+ +Y+ G I A +F
Sbjct: 294 TLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMN 353
Query: 153 SNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEG--VEPDQFTFPRVLKACAGLGLI 210
+N+ + WN+++ G++ G+ + QM G V+ D+ T + C +
Sbjct: 354 NNKNVVS--WNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFL 411
Query: 211 RVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISYNSMLTGY 270
+++H +++ F ++ V NA V YAKCG + A+ VF I +K + S+N+++ G+
Sbjct: 412 PSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGH 471
Query: 271 IHHGLLVEAFDIFRGMILNGFDPDPVAISSILANASL---LRIGAQVHGWVLRRGVEWDL 327
+ D M ++G PD + S+L+ S LR+G +VHG+++R +E DL
Sbjct: 472 AQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDL 531
Query: 328 CIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAHSKD---HEALIYFEQMERD 384
+ S++ +Y G+L LFD M K +VSWN++I + ++ AL F QM
Sbjct: 532 FVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLY 591
Query: 385 GVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEH---YAC-MVNLYGRAG 440
G+ ++ + + AC+ L S+++G Y + +E AC ++++Y + G
Sbjct: 592 GIQLCGISMMPVFGACSLLPSLRLGRE-----AHAYALKHLLEDDAFIACSLIDMYAKNG 646
Query: 441 LIDEAYSMIVEKMEFEASPVVWGALLYACYLHGNVCMGETAAQKLFELEPDNEHN 495
I ++ S + ++ E S W A++ +HG A KLFE HN
Sbjct: 647 SITQS-SKVFNGLK-EKSTASWNAMIMGYGIHGLA----KEAIKLFEEMQRTGHN 695
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 75/145 (51%), Gaps = 7/145 (4%)
Query: 326 DLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAHSKDH---EAL-IYFEQM 381
D + +I +Y+ G D + ++FD + K++ WN++I ++S++ E L + E +
Sbjct: 119 DDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMI 178
Query: 382 ERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVNLYGRAGL 441
+LPDH T+ ++ ACA + V +G + ++V K G+ V +V+ YG G
Sbjct: 179 STTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVV-KTGLVEDVFVGNALVSFYGTHGF 237
Query: 442 IDEAYSMIVEKMEFEASPVVWGALL 466
+ +A + + E + V W +++
Sbjct: 238 VTDALQLF--DIMPERNLVSWNSMI 260
>sp|Q9LND4|PPR14_ARATH Pentatricopeptide repeat-containing protein At1g06140,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E61 PE=2
SV=1
Length = 558
Score = 266 bits (680), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 153/433 (35%), Positives = 245/433 (56%), Gaps = 10/433 (2%)
Query: 98 LETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLIDEAHQVFDQMSNRTA 157
++ C L +E+GI +H L N L K+ ++ L+ +YA G ++ A +VFD++ R +
Sbjct: 116 IKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNS 175
Query: 158 FAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKACAGLGLIRVGEKVH 217
W L+ GY + + + L+ M + G+ D T ++KAC + +VG+ VH
Sbjct: 176 VL--WGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVH 233
Query: 218 LDAVRFGFGFDGFVLNA-LVDMYAKCGDIVKARTVFDRIGNKDLISYNSMLTGYIHHGLL 276
++R F L A ++DMY KC + AR +F+ +++++ + ++++G+
Sbjct: 234 GVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERA 293
Query: 277 VEAFDIFRGMILNGFDPDPVAISSILANASLL---RIGAQVHGWVLRRGVEWDLCIANSL 333
VEAFD+FR M+ P+ +++IL + S L R G VHG+++R G+E D S
Sbjct: 294 VEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSF 353
Query: 334 IVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAHSKD---HEALIYFEQMERDGVLPDH 390
I +Y++ G + A +FD MP+++V+SW+S+I+A + EAL F +M+ V+P+
Sbjct: 354 IDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNS 413
Query: 391 LTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVNLYGRAGLIDEAYSMIV 450
+TFVSLLSAC+H G+VK G + F M YG+ P EHYACMV+L GRAG I EA S I
Sbjct: 414 VTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFI- 472
Query: 451 EKMEFEASPVVWGALLYACYLHGNVCMGETAAQKLFELEPDNEHNFELLIKIYGNAGRLD 510
+ M + WGALL AC +H V + A+KL +EP+ + LL IY +AG +
Sbjct: 473 DNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWE 532
Query: 511 DVERVERMLVDRG 523
V V R + +G
Sbjct: 533 MVNCVRRKMGIKG 545
Score = 145 bits (366), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 106/387 (27%), Positives = 188/387 (48%), Gaps = 12/387 (3%)
Query: 96 SLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLIDEAHQVFDQMSNR 155
+LL Q K + H ++H + + + S L Y +D A F+++
Sbjct: 9 ALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCW 68
Query: 156 TAFAFPWNSLISGYAELGE--YEDAIALYFQMEEEGVEPDQFTFPRVLKACAGLGLIRVG 213
WN+++SGY++ Y D + LY +M D F +KAC GLGL+ G
Sbjct: 69 KRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENG 128
Query: 214 EKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISYNSMLTGYIHH 273
+H A++ G D +V +LV+MYA+ G + A+ VFD I ++ + + ++ GY+ +
Sbjct: 129 ILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKY 188
Query: 274 GLLVEAFDIFRGMILNGFDPDPVAISSIL---ANASLLRIGAQVHGWVLRRG-VEWDLCI 329
E F +F M G D + + ++ N ++G VHG +RR ++ +
Sbjct: 189 SKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYL 248
Query: 330 ANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAHSKDH---EALIYFEQMERDGV 386
S+I +Y K LD A LF+ ++VV W ++I +K EA F QM R+ +
Sbjct: 249 QASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESI 308
Query: 387 LPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVNLYGRAGLIDEAY 446
LP+ T ++L +C+ LGS++ G+ + M+ + GI ++ +++Y R G I A
Sbjct: 309 LPNQCTLAAILVSCSSLGSLRHGKSVHGYMI-RNGIEMDAVNFTSFIDMYARCGNIQMAR 367
Query: 447 SMIVEKMEFEASPVVWGALLYACYLHG 473
+ V M E + + W +++ A ++G
Sbjct: 368 T--VFDMMPERNVISWSSMINAFGING 392
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 146/290 (50%), Gaps = 12/290 (4%)
Query: 86 GITVQTETFASLLETCYQLKAVEHGIKLHRL-IPTNLLRKNKGISSKLLRLYATFGLIDE 144
G+ + T L++ C + A + G +H + I + + ++ + + ++ +Y L+D
Sbjct: 205 GLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDN 264
Query: 145 AHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKAC 204
A ++F+ +R W +LISG+A+ +A L+ QM E + P+Q T +L +C
Sbjct: 265 ARKLFETSVDRNVVM--WTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSC 322
Query: 205 AGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISYN 264
+ LG +R G+ VH +R G D + +DMYA+CG+I ARTVFD + +++IS++
Sbjct: 323 SSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWS 382
Query: 265 SMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSILANASLLRIGAQVHGWVLRRGVE 324
SM+ + +GL EA D F M P+ V S+L+ S G GW +
Sbjct: 383 SMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACS--HSGNVKEGWKQFESMT 440
Query: 325 WDLCIA------NSLIVVYSKDGKLDQACWLFDHMPQKDVVS-WNSIIHA 367
D + ++ + + G++ +A D+MP K + S W +++ A
Sbjct: 441 RDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSA 490
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 266 bits (680), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 167/524 (31%), Positives = 283/524 (54%), Gaps = 32/524 (6%)
Query: 29 KQRRQKQQQISRNRITTFSSYPKSSPTPLLTNQKAFPKTKLQALDSIIQDLESSVQNGIT 88
K R +K S +R+ + + L N + KT + + +S+I DL S +
Sbjct: 2 KVRSKKALFCSVSRLLHTERHTERQNLTTLFN-RYVDKTDVFSWNSVIADLARSGDSAEA 60
Query: 89 V-------------QTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRL 135
+ +F ++ C L + G + H+ + + +SS L+ +
Sbjct: 61 LLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVM 120
Query: 136 YATFGLIDEAHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQM------EEEG 189
Y+T G +++A +VFD++ R + W S+I GY G DA++L+ + +++
Sbjct: 121 YSTCGKLEDARKVFDEIPKRNIVS--WTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDA 178
Query: 190 VEPDQFTFPRVLKACAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGD--IVK 247
+ D V+ AC+ + + E +H ++ GF V N L+D YAK G+ +
Sbjct: 179 MFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAV 238
Query: 248 ARTVFDRIGNKDLISYNSMLTGYIHHGLLVEAFDIFRGMILNGFDP-DPVAISSIL---A 303
AR +FD+I +KD +SYNS+++ Y G+ EAF++FR ++ N + + +S++L +
Sbjct: 239 ARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVS 298
Query: 304 NASLLRIGAQVHGWVLRRGVEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNS 363
++ LRIG +H V+R G+E D+ + S+I +Y K G+++ A FD M K+V SW +
Sbjct: 299 HSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTA 358
Query: 364 IIHA---HSKDHEALIYFEQMERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKY 420
+I H +AL F M GV P+++TFVS+L+AC+H G G R F+ M ++
Sbjct: 359 MIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRF 418
Query: 421 GISPRVEHYACMVNLYGRAGLIDEAYSMIVEKMEFEASPVVWGALLYACYLHGNVCMGET 480
G+ P +EHY CMV+L GRAG + +AY +I ++M+ + ++W +LL AC +H NV + E
Sbjct: 419 GVEPGLEHYGCMVDLLGRAGFLQKAYDLI-QRMKMKPDSIIWSSLLAACRIHKNVELAEI 477
Query: 481 AAQKLFELEPDNEHNFELLIKIYGNAGRLDDVERVERMLVDRGL 524
+ +LFEL+ N + LL IY +AGR DVERV ++ +RGL
Sbjct: 478 SVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGL 521
>sp|Q9FK33|PP427_ARATH Pentatricopeptide repeat-containing protein At5g50390,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H58 PE=2
SV=1
Length = 701
Score = 266 bits (679), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 152/492 (30%), Positives = 273/492 (55%), Gaps = 11/492 (2%)
Query: 39 SRNRITTFSSYPKSSPTPLLTNQKAFPKTKLQALDSIIQDLESSVQNGITVQTETFASLL 98
S+++I + KS T +K + + + + LE ++ V T+ +L+
Sbjct: 73 SKDQILDDTQISKSGVTICSQIEKLVLCNRFREAFELFEILE--IRCSFKVGVSTYDALV 130
Query: 99 ETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLIDEAHQVFDQMSNRTAF 158
E C +LK++ +++ + +N + + +++L ++ G+I +A ++FD++ R +
Sbjct: 131 EACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLY 190
Query: 159 AFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKACAGLGLIRVGEKVHL 218
++ S+ISG+ G Y +A L+ M EE + + TF +L+A AGLG I VG+++H+
Sbjct: 191 SY--YSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHV 248
Query: 219 DAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISYNSMLTGYIHHGLLVE 278
A++ G + FV L+DMY+KCGDI AR F+ + K +++N+++ GY HG E
Sbjct: 249 CALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEE 308
Query: 279 AFDIFRGMILNGFDPDPVAIS---SILANASLLRIGAQVHGWVLRRGVEWDLCIANSLIV 335
A + M +G D +S I + L + Q H ++R G E ++ +L+
Sbjct: 309 ALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVD 368
Query: 336 VYSKDGKLDQACWLFDHMPQKDVVSWNSIIHA---HSKDHEALIYFEQMERDGVLPDHLT 392
YSK G++D A ++FD +P+K+++SWN+++ H + +A+ FE+M V P+H+T
Sbjct: 369 FYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVT 428
Query: 393 FVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVNLYGRAGLIDEAYSMIVEK 452
F+++LSACA+ G + G +F M E +GI PR HYACM+ L GR GL+DEA + I +
Sbjct: 429 FLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFI-RR 487
Query: 453 MEFEASPVVWGALLYACYLHGNVCMGETAAQKLFELEPDNEHNFELLIKIYGNAGRLDDV 512
+ + +W ALL AC + N+ +G A+KL+ + P+ N+ ++ +Y + G+ +
Sbjct: 488 APLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEA 547
Query: 513 ERVERMLVDRGL 524
V L +GL
Sbjct: 548 AGVLETLESKGL 559
>sp|Q7XJN6|PP197_ARATH Pentatricopeptide repeat-containing protein At2g40720
OS=Arabidopsis thaliana GN=PCMP-E26 PE=3 SV=1
Length = 860
Score = 265 bits (677), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 155/450 (34%), Positives = 256/450 (56%), Gaps = 13/450 (2%)
Query: 84 QNGITVQTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLID 143
Q + + T ++++ C L +G +H + ++ I S LL LY+ G
Sbjct: 366 QKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDP 425
Query: 144 EAHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQM--EEEGVEPDQFTFPRVL 201
+A+ VF M + A W SLISG + G++++A+ ++ M +++ ++PD V
Sbjct: 426 DAYLVFKSMEEKDMVA--WGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVT 483
Query: 202 KACAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLI 261
ACAGL +R G +VH ++ G + FV ++L+D+Y+KCG A VF + ++++
Sbjct: 484 NACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMV 543
Query: 262 SYNSMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSIL----ANASLLRIGAQVHGW 317
++NSM++ Y + L + D+F M+ G PD V+I+S+L + ASLL+ G +HG+
Sbjct: 544 AWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLK-GKSLHGY 602
Query: 318 VLRRGVEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIH---AHSKDHEA 374
LR G+ D + N+LI +Y K G A +F M K +++WN +I+ +H A
Sbjct: 603 TLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITA 662
Query: 375 LIYFEQMERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVN 434
L F++M++ G PD +TF+SL+SAC H G V+ G+ +F M + YGI P +EHYA MV+
Sbjct: 663 LSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVD 722
Query: 435 LYGRAGLIDEAYSMIVEKMEFEASPVVWGALLYACYLHGNVCMGETAAQKLFELEPDNEH 494
L GRAGL++EAYS I + M EA +W LL A H NV +G +A+KL +EP+
Sbjct: 723 LLGRAGLLEEAYSFI-KAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGS 781
Query: 495 NFELLIKIYGNAGRLDDVERVERMLVDRGL 524
+ LI +Y AG ++ ++ ++ ++GL
Sbjct: 782 TYVQLINLYMEAGLKNEAAKLLGLMKEKGL 811
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 120/455 (26%), Positives = 227/455 (49%), Gaps = 21/455 (4%)
Query: 84 QNGITVQTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLID 143
N + + + +F L C Q + G ++H + L + + + LL +Y+ G++
Sbjct: 265 NNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVG 324
Query: 144 EAHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKA 203
EA VF + ++ WN++++ YAE A+ L+ M ++ V PD FT V+
Sbjct: 325 EAETVFSCVVDKRLEI--WNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISC 382
Query: 204 CAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISY 263
C+ LGL G+ VH + + + +AL+ +Y+KCG A VF + KD++++
Sbjct: 383 CSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAW 442
Query: 264 NSMLTGYIHHGLLVEAFDIFRGMI--LNGFDPDP---VAISSILANASLLRIGAQVHGWV 318
S+++G +G EA +F M + PD ++++ A LR G QVHG +
Sbjct: 443 GSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSM 502
Query: 319 LRRGVEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAHSKDH---EAL 375
++ G+ ++ + +SLI +YSK G + A +F M +++V+WNS+I +S+++ ++
Sbjct: 503 IKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSI 562
Query: 376 IYFEQMERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVNL 435
F M G+ PD ++ S+L A + S+ G+ L + + GI ++++
Sbjct: 563 DLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTL-RLGIPSDTHLKNALIDM 621
Query: 436 YGRAGLIDEAYSMIVEKMEFEASPVVWGALLYACYLHGNVCMGETAAQKLFEL----EPD 491
Y + G A + I +KM+ + S + W ++Y HG+ C+ TA E+ E
Sbjct: 622 YVKCGFSKYAEN-IFKKMQHK-SLITWNLMIYGYGSHGD-CI--TALSLFDEMKKAGESP 676
Query: 492 NEHNFELLIKIYGNAGRLDDVERV-ERMLVDRGLE 525
++ F LI ++G +++ + + E M D G+E
Sbjct: 677 DDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIE 711
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 191/380 (50%), Gaps = 21/380 (5%)
Query: 108 EHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLIDEAHQVFDQMSNRTAFAFPWNSLIS 167
E G ++H + N L + + + L+ +Y FGL +A +VF ++ +++ WN +I
Sbjct: 187 EEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVL-WNVMIV 245
Query: 168 GYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKACAGLGLIRVGEKVHLDAVRFGFGF 227
G+ G E ++ LY + V+ +F L AC+ G ++H D V+ G
Sbjct: 246 GFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHN 305
Query: 228 DGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISYNSMLTGYIHHGLLVEAFDIFRGMI 287
D +V +L+ MY+KCG + +A TVF + +K L +N+M+ Y + A D+F M
Sbjct: 306 DPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMR 365
Query: 288 LNGFDPDPVAISSILANASLLRI---GAQVHGWVLRRGVEWDLCIANSLIVVYSKDGKLD 344
PD +S++++ S+L + G VH + +R ++ I ++L+ +YSK G
Sbjct: 366 QKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDP 425
Query: 345 QACWLFDHMPQKDVVSWNSIIHAHSKD---HEALIYFEQM--ERDGVLPDHLTFVSLLSA 399
A +F M +KD+V+W S+I K+ EAL F M + D + PD S+ +A
Sbjct: 426 DAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNA 485
Query: 400 CAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVNLYGRAGLIDEAY----SMIVEKMEF 455
CA L +++ G ++ M+ K G+ V + +++LY + GL + A SM E M
Sbjct: 486 CAGLEALRFGLQVHGSMI-KTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENM-- 542
Query: 456 EASPVVWGALLYACYLHGNV 475
V W +++ +CY N+
Sbjct: 543 ----VAWNSMI-SCYSRNNL 557
Score = 142 bits (357), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 106/388 (27%), Positives = 189/388 (48%), Gaps = 17/388 (4%)
Query: 93 TFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLIDEAHQVFDQM 152
TF SLL+ C L + +G +H + R + I++ L+ +Y G +D A QVFD
Sbjct: 62 TFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGW 121
Query: 153 SNRTAFAFP-----WNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKACAGL 207
S + WNS+I GY + +++ + + +M GV PD F+ V+
Sbjct: 122 SQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKE 181
Query: 208 GLIR--VGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNK-DLISYN 264
G R G+++H +R D F+ AL+DMY K G + A VF I +K +++ +N
Sbjct: 182 GNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWN 241
Query: 265 SMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSILANASLLR---IGAQVHGWVLRR 321
M+ G+ G+ + D++ N + + L S G Q+H V++
Sbjct: 242 VMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKM 301
Query: 322 GVEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAHSKD---HEALIYF 378
G+ D + SL+ +YSK G + +A +F + K + WN+++ A++++ + AL F
Sbjct: 302 GLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLF 361
Query: 379 EQMERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVNLYGR 438
M + VLPD T +++S C+ LG G+ + + + ++ I + ++ LY +
Sbjct: 362 GFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKR-PIQSTSTIESALLTLYSK 420
Query: 439 AGLIDEAYSMIVEKMEFEASPVVWGALL 466
G +AY ++ + ME E V WG+L+
Sbjct: 421 CGCDPDAY-LVFKSME-EKDMVAWGSLI 446
Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 159/330 (48%), Gaps = 34/330 (10%)
Query: 163 NSLISGYAELGEYEDAIALYFQMEEEGVEP---DQFTFPRVLKACAGLGLIRVGEKVHLD 219
NS I + GEY A+ LY + +G P FTFP +LKAC+ L + G+ +H
Sbjct: 28 NSGIRALIQKGEYLQALHLY--SKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85
Query: 220 AVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFD-------RIGNKDLISYNSMLTGYIH 272
V G+ +D F+ +LV+MY KCG + A VFD + +D+ +NSM+ GY
Sbjct: 86 VVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFK 145
Query: 273 HGLLVEAFDIFRGMILNGFDPDPVAIS---SILANASLLRI--GAQVHGWVLRRGVEWDL 327
E FR M++ G PD ++S S++ R G Q+HG++LR ++ D
Sbjct: 146 FRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDS 205
Query: 328 CIANSLIVVYSKDGKLDQACWLFDHMPQK-DVVSWNSIIHAHSKD---HEALIYFEQMER 383
+ +LI +Y K G A +F + K +VV WN +I +L + +
Sbjct: 206 FLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKN 265
Query: 384 DGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYAC--MVNLYGRAGL 441
+ V +F L AC+ + G ++ +V K G+ + Y C ++++Y + G+
Sbjct: 266 NSVKLVSTSFTGALGACSQSENSGFGRQIHCDVV-KMGLHN--DPYVCTSLLSMYSKCGM 322
Query: 442 IDEA---YSMIVEKMEFEASPVVWGALLYA 468
+ EA +S +V+K E +W A++ A
Sbjct: 323 VGEAETVFSCVVDK-RLE----IWNAMVAA 347
>sp|P93011|PP182_ARATH Pentatricopeptide repeat-containing protein At2g33760
OS=Arabidopsis thaliana GN=PCMP-H6 PE=3 SV=1
Length = 583
Score = 265 bits (676), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 144/410 (35%), Positives = 239/410 (58%), Gaps = 11/410 (2%)
Query: 124 KNKGISSKLLRLYATFGLIDEAHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYF 183
+++ + +KL+ L + I H +F +S F +NS+I ++L +A Y
Sbjct: 39 RSRSLLTKLITLACSARAIAYTHLLF--LSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYR 96
Query: 184 QMEEEGVEPDQFTFPRVLKACAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCG 243
+M V P +TF V+K+CA L +R+G+ VH AV GFG D +V ALV Y+KCG
Sbjct: 97 RMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCG 156
Query: 244 DIVKARTVFDRIGNKDLISYNSMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSIL- 302
D+ AR VFDR+ K ++++NS+++G+ +GL EA +F M +GF+PD S+L
Sbjct: 157 DMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLS 216
Query: 303 --ANASLLRIGAQVHGWVLRRGVEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVS 360
A + +G+ VH +++ G++ ++ + +LI +YS+ G + +A +FD M + +V +
Sbjct: 217 ACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAA 276
Query: 361 WNSIIHA---HSKDHEALIYFEQMERD-GVLPDHLTFVSLLSACAHLGSVKVGERLFSVM 416
W ++I A H +A+ F +ME D G +P+++TFV++LSACAH G V+ G ++ M
Sbjct: 277 WTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRM 336
Query: 417 VEKYGISPRVEHYACMVNLYGRAGLIDEAYSMI--VEKMEFEASPVVWGALLYACYLHGN 474
+ Y + P VEH+ CMV++ GRAG +DEAY I ++ +P +W A+L AC +H N
Sbjct: 337 TKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRN 396
Query: 475 VCMGETAAQKLFELEPDNEHNFELLIKIYGNAGRLDDVERVERMLVDRGL 524
+G A++L LEPDN + +L IY +G+ D+V + ++ L
Sbjct: 397 YDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNL 446
Score = 139 bits (350), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 189/406 (46%), Gaps = 57/406 (14%)
Query: 54 PTPLLTNQKAFPKTKLQALDSIIQDLESSVQNGITVQTETFASLLETCYQLKAVEHGIKL 113
P L N +KL+ + + + ++ TF S++++C L A+ G +
Sbjct: 70 PDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGV 129
Query: 114 HRLIPTNLLRKNKGISSKLLRLYATFGLIDEAHQVFDQMSNRTAFAFPWNSLISGYAELG 173
H + + + + L+ Y+ G ++ A QVFD+M ++ A WNSL+SG+ + G
Sbjct: 130 HCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVA--WNSLVSGFEQNG 187
Query: 174 EYEDAIALYFQMEEEGVEPDQFTFPRVLKACAGLGLIRVGEKVHLDAVRFGFGFDGFVLN 233
++AI +++QM E G EPD TF +L ACA G + +G VH + G + +
Sbjct: 188 LADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGT 247
Query: 234 ALVDMYAKCGDIVKARTVFDRIGNKDLISYNSMLTGYIHHGLLVEAFDIFRGMILNGFDP 293
AL+++Y++CGD+ KAR VFD++ ++ ++ +M++ Y HG +A ++F M + P
Sbjct: 248 ALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKM-EDDCGP 306
Query: 294 DP-----VAISSILANASLLRIGAQVH-----GWVLRRGVEWDLCIANSLIVVYSKDGKL 343
P VA+ S A+A L+ G V+ + L GVE +C+ + L + G L
Sbjct: 307 IPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDML----GRAGFL 362
Query: 344 DQACWLFDHMPQKDVVSWNSIIHAHSKDHEALIYFEQMERDGVLPDHLTFVSLLSACA-- 401
D EA + Q++ G + ++L AC
Sbjct: 363 D----------------------------EAYKFIHQLDATGKATAPALWTAMLGACKMH 394
Query: 402 ---HLGSVKVGERLFSVMVEKYGISPRVEHYACMVNLYGRAGLIDE 444
LG V++ +RL ++ + G H+ + N+Y +G DE
Sbjct: 395 RNYDLG-VEIAKRLIALEPDNPG------HHVMLSNIYALSGKTDE 433
Score = 119 bits (299), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 152/318 (47%), Gaps = 17/318 (5%)
Query: 214 EKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISYNSMLTGYIHH 273
++VH + G+G +L L+ + I +F + D +NS++
Sbjct: 26 QQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKL 85
Query: 274 GLLVEAFDIFRGMILNGFDPDPVAISSIL---ANASLLRIGAQVHGWVLRRGVEWDLCIA 330
L + +R M+ + P +S++ A+ S LRIG VH + G D +
Sbjct: 86 RLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQ 145
Query: 331 NSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAHSKD---HEALIYFEQMERDGVL 387
+L+ YSK G ++ A +FD MP+K +V+WNS++ ++ EA+ F QM G
Sbjct: 146 AALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFE 205
Query: 388 PDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVNLYGRAGLIDEAYS 447
PD TFVSLLSACA G+V +G + ++ + G+ V+ ++NLY R G + +A
Sbjct: 206 PDSATFVSLLSACAQTGAVSLGSWVHQYIISE-GLDLNVKLGTALINLYSRCGDVGKARE 264
Query: 448 MIVEKMEFEASPVVWGALLYACYLHGNVCMGETAAQKLFELEPD-----NEHNFELLIKI 502
+ +KM+ E + W A++ A HG G+ A + ++E D N F ++
Sbjct: 265 -VFDKMK-ETNVAAWTAMISAYGTHG---YGQQAVELFNKMEDDCGPIPNNVTFVAVLSA 319
Query: 503 YGNAGRLDDVERVERMLV 520
+AG +++ V + +
Sbjct: 320 CAHAGLVEEGRSVYKRMT 337
>sp|Q9LT48|PP244_ARATH Pentatricopeptide repeat-containing protein At3g20730
OS=Arabidopsis thaliana GN=PCMP-E94 PE=2 SV=1
Length = 565
Score = 265 bits (676), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 143/440 (32%), Positives = 247/440 (56%), Gaps = 11/440 (2%)
Query: 93 TFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLIDEAHQVFDQM 152
T+ S+L++C L ++ G+++H + N + S LL LYA G ++EA FD M
Sbjct: 116 TYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSM 175
Query: 153 SNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKACAGLGLIRV 212
R + WN++I GY + + +L+ M EG +PD FTF +L+A + + +
Sbjct: 176 KERDLVS--WNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEI 233
Query: 213 GEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISYNSMLTGYIH 272
++H A++ GFG ++ +LV+ Y KCG + A + + +DL+S +++TG+
Sbjct: 234 VSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQ 293
Query: 273 -HGLLVEAFDIFRGMILNGFDPDPVAISSIL---ANASLLRIGAQVHGWVLRRG-VEWDL 327
+ +AFDIF+ MI D V +SS+L + + IG Q+HG+ L+ + +D+
Sbjct: 294 QNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDV 353
Query: 328 CIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHA---HSKDHEALIYFEQMERD 384
+ NSLI +Y+K G+++ A F+ M +KDV SW S+I H +A+ + +ME +
Sbjct: 354 ALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHE 413
Query: 385 GVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVNLYGRAGLIDE 444
+ P+ +TF+SLLSAC+H G ++G +++ M+ K+GI R EH +C++++ R+G ++E
Sbjct: 414 RIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEE 473
Query: 445 AYSMIVEKMEFEA-SPVVWGALLYACYLHGNVCMGETAAQKLFELEPDNEHNFELLIKIY 503
AY++I K + S WGA L AC HGNV + + AA +L +EP N+ L +Y
Sbjct: 474 AYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVY 533
Query: 504 GNAGRLDDVERVERMLVDRG 523
G D+ +++ + G
Sbjct: 534 AANGAWDNALNTRKLMKESG 553
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 185/363 (50%), Gaps = 11/363 (3%)
Query: 119 TNLLRKNKGISSKLLRLYATFGLIDEAHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDA 178
TN N + L+ LY G + A ++FD++S R + W ++IS ++ G + DA
Sbjct: 41 TNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVS--WTAMISRFSRCGYHPDA 98
Query: 179 IALYFQMEEEGVEPDQFTFPRVLKACAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDM 238
+ L+ +M E V+ +QFT+ VLK+C LG ++ G ++H + + V +AL+ +
Sbjct: 99 LLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSL 158
Query: 239 YAKCGDIVKARTVFDRIGNKDLISYNSMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAI 298
YA+CG + +AR FD + +DL+S+N+M+ GY + +F +F+ M+ G PD
Sbjct: 159 YARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTF 218
Query: 299 SSILANA---SLLRIGAQVHGWVLRRGVEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQ 355
S+L + L I +++HG ++ G + SL+ Y K G L A L + +
Sbjct: 219 GSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKK 278
Query: 356 KDVVSWNSIIHAHSKDH----EALIYFEQMERDGVLPDHLTFVSLLSACAHLGSVKVGER 411
+D++S ++I S+ + +A F+ M R D + S+L C + SV +G +
Sbjct: 279 RDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQ 338
Query: 412 LFSVMVEKYGISPRVEHYACMVNLYGRAGLIDEAYSMIVEKMEFEASPVVWGALLYACYL 471
+ ++ I V ++++Y ++G I++A + E+M+ E W +L+
Sbjct: 339 IHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAV-LAFEEMK-EKDVRSWTSLIAGYGR 396
Query: 472 HGN 474
HGN
Sbjct: 397 HGN 399
>sp|Q9SIL5|PP165_ARATH Pentatricopeptide repeat-containing protein At2g20540
OS=Arabidopsis thaliana GN=PCMP-E78 PE=2 SV=1
Length = 534
Score = 263 bits (673), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 151/422 (35%), Positives = 231/422 (54%), Gaps = 41/422 (9%)
Query: 142 IDEAHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVE-PDQFTFPRV 200
+D A ++F+Q+SN F + NS+I Y Y D I +Y Q+ + E PD+FTFP +
Sbjct: 58 MDYATRLFNQVSNPNVFLY--NSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFM 115
Query: 201 LKACAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDL 260
K+CA LG +G++VH +FG F NAL+DMY K D+V A VFD + +D+
Sbjct: 116 FKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDV 175
Query: 261 ISYNSMLTGYIHHGLL-------------------------------VEAFDIFRGMILN 289
IS+NS+L+GY G + VEA D FR M L
Sbjct: 176 ISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLA 235
Query: 290 GFDPDPVAISSIL---ANASLLRIGAQVHGWVLRRGVEWDLCIANSLIVVYSKDGKLDQA 346
G +PD +++ S+L A L +G +H + RRG + N+LI +YSK G + QA
Sbjct: 236 GIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQA 295
Query: 347 CWLFDHMPQKDVVSWNSIIHA---HSKDHEALIYFEQMERDGVLPDHLTFVSLLSACAHL 403
LF M KDV+SW+++I H H A+ F +M+R V P+ +TF+ LLSAC+H+
Sbjct: 296 IQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHV 355
Query: 404 GSVKVGERLFSVMVEKYGISPRVEHYACMVNLYGRAGLIDEAYSMIVEKMEFEASPVVWG 463
G + G R F +M + Y I P++EHY C++++ RAG ++ A I + M + +WG
Sbjct: 356 GMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVE-ITKTMPMKPDSKIWG 414
Query: 464 ALLYACYLHGNVCMGETAAQKLFELEPDNEHNFELLIKIYGNAGRLDDVERVERMLVDRG 523
+LL +C GN+ + A L ELEP++ N+ LL IY + G+ +DV R+ +M+ +
Sbjct: 415 SLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNEN 474
Query: 524 LE 525
++
Sbjct: 475 MK 476
Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 176/386 (45%), Gaps = 76/386 (19%)
Query: 93 TFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLIDEAHQVFDQM 152
TF + ++C L + G ++H + R + + L+ +Y F + +AH+VFD+M
Sbjct: 111 TFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEM 170
Query: 153 SNRTAFAFPWNSLISGYAELGE-------------------------------YEDAIAL 181
R + WNSL+SGYA LG+ Y +A+
Sbjct: 171 YERDVIS--WNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDF 228
Query: 182 YFQMEEEGVEPDQFTFPRVLKACAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAK 241
+ +M+ G+EPD+ + VL +CA LG + +G+ +HL A R GF V NAL++MY+K
Sbjct: 229 FREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSK 288
Query: 242 CGDIVKARTVFDRIGNKDLISYNSMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSI 301
CG I +A +F ++ KD+IS+++M++GY +HG A + F M P+ + +
Sbjct: 289 CGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGL 348
Query: 302 LANASLLRIGAQVHGW----VLRRGVEWDLCIAN--SLIVVYSKDGKLDQACWLFDHMPQ 355
L+ S +G G ++R+ + + I + LI V ++ GKL++A + MP
Sbjct: 349 LSACS--HVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPM 406
Query: 356 KDVVSWNSIIHAHSKDHEALIYFEQMERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSV 415
K PD + SLLS+C G++ V
Sbjct: 407 K-------------------------------PDSKIWGSLLSSCRTPGNLDVALVAMDH 435
Query: 416 MVEKYGISPR-VEHYACMVNLYGRAG 440
+VE + P + +Y + N+Y G
Sbjct: 436 LVE---LEPEDMGNYVLLANIYADLG 458
Score = 106 bits (264), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 141/300 (47%), Gaps = 43/300 (14%)
Query: 214 EKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISYNSMLTGYIHH 273
+K++ + G F++ +VD K D+ A +F+++ N ++ YNS++ Y H+
Sbjct: 27 KKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHN 86
Query: 274 GLLVEAFDIFRGMILNGFD-PDPVAISSILANASLL---RIGAQVHGWVLRRGVEWDLCI 329
L + I++ ++ F+ PD + + + L +G QVHG + + G + +
Sbjct: 87 SLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVT 146
Query: 330 ANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAHSK---------------DH-- 372
N+LI +Y K L A +FD M ++DV+SWNS++ +++ D
Sbjct: 147 ENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTI 206
Query: 373 -----------------EALIYFEQMERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSV 415
EA+ +F +M+ G+ PD ++ +S+L +CA LGS+++G + +
Sbjct: 207 VSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELG-KWIHL 265
Query: 416 MVEKYGISPRVEHYACMVNLYGRAGLIDEAYSMIVEKMEFEASPVV-WGALLYACYLHGN 474
E+ G + ++ +Y + G+I +A + + E V+ W ++ HGN
Sbjct: 266 YAERRGFLKQTGVCNALIEMYSKCGVISQAIQLF---GQMEGKDVISWSTMISGYAYHGN 322
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 87/165 (52%), Gaps = 5/165 (3%)
Query: 86 GITVQTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLIDEA 145
GI + S+L +C QL ++E G +H K G+ + L+ +Y+ G+I +A
Sbjct: 236 GIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQA 295
Query: 146 HQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKACA 205
Q+F QM + + W+++ISGYA G AI + +M+ V+P+ TF +L AC+
Sbjct: 296 IQLFGQMEGKDVIS--WSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACS 353
Query: 206 GLGLIRVGEKVHLDAVRFGFGFDGFV--LNALVDMYAKCGDIVKA 248
+G+ + G + + D +R + + + L+D+ A+ G + +A
Sbjct: 354 HVGMWQEGLR-YFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERA 397
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 261 bits (667), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 150/450 (33%), Positives = 252/450 (56%), Gaps = 10/450 (2%)
Query: 83 VQNGITVQTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLI 142
+ +G+ TF+SLL + + + +E+ ++H I + + + ++S L+ Y +
Sbjct: 332 ISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGV 391
Query: 143 DEAHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLK 202
A +F Q ++ F ++ISGY G Y D++ ++ + + + P++ T +L
Sbjct: 392 SMAQNIFSQCNSVDVVVF--TAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILP 449
Query: 203 ACAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLIS 262
L +++G ++H ++ GF + A++DMYAKCG + A +F+R+ +D++S
Sbjct: 450 VIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVS 509
Query: 263 YNSMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSIL---ANASLLRIGAQVHGWVL 319
+NSM+T A DIFR M ++G D V+IS+ L AN G +HG+++
Sbjct: 510 WNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMI 569
Query: 320 RRGVEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHA---HSKDHEALI 376
+ + D+ ++LI +Y+K G L A +F M +K++VSWNSII A H K ++L
Sbjct: 570 KHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLC 629
Query: 377 YFEQM-ERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVNL 435
F +M E+ G+ PD +TF+ ++S+C H+G V G R F M E YGI P+ EHYAC+V+L
Sbjct: 630 LFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDL 689
Query: 436 YGRAGLIDEAYSMIVEKMEFEASPVVWGALLYACYLHGNVCMGETAAQKLFELEPDNEHN 495
+GRAG + EAY V+ M F VWG LL AC LH NV + E A+ KL +L+P N
Sbjct: 690 FGRAGRLTEAYE-TVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGY 748
Query: 496 FELLIKIYGNAGRLDDVERVERMLVDRGLE 525
+ L+ + NA + V +V ++ +R ++
Sbjct: 749 YVLISNAHANAREWESVTKVRSLMKEREVQ 778
Score = 211 bits (538), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 132/470 (28%), Positives = 252/470 (53%), Gaps = 18/470 (3%)
Query: 67 TKLQALDSIIQDLESSVQNGITVQTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNK 126
K ALDS+I+ + I+ TF +L C ++ G++LH L+ + +
Sbjct: 215 AKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEG 274
Query: 127 GISSKLLRLYATFGLIDEAHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQME 186
I + LL +Y+ G D+A ++F MS A WN +ISGY + G E+++ +++M
Sbjct: 275 SIKNSLLSMYSKCGRFDDASKLFRMMSR--ADTVTWNCMISGYVQSGLMEESLTFFYEMI 332
Query: 187 EEGVEPDQFTFPRVLKACAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIV 246
GV PD TF +L + + + +++H +R D F+ +AL+D Y KC +
Sbjct: 333 SSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVS 392
Query: 247 KARTVFDRIGNKDLISYNSMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSILANAS 306
A+ +F + + D++ + +M++GY+H+GL +++ ++FR ++ P+ + + SIL
Sbjct: 393 MAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIG 452
Query: 307 L---LRIGAQVHGWVLRRGVEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNS 363
+ L++G ++HG+++++G + I ++I +Y+K G+++ A +F+ + ++D+VSWNS
Sbjct: 453 ILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNS 512
Query: 364 IIH--AHSKDHEALI-YFEQMERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKY 420
+I A S + A I F QM G+ D ++ + LSACA+L S G+ + M+ K+
Sbjct: 513 MITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMI-KH 571
Query: 421 GISPRVEHYACMVNLYGRAGLIDEAYSMIVEKMEFEASPVVWGALLYACYLHG----NVC 476
++ V + ++++Y + G + A M V K E + V W +++ AC HG ++C
Sbjct: 572 SLASDVYSESTLIDMYAKCGNLKAA--MNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLC 629
Query: 477 MGETAAQKLFELEPDNEHNFELLIKIYGNAGRLDDVERVER-MLVDRGLE 525
+ +K + PD + F +I + G +D+ R R M D G++
Sbjct: 630 LFHEMVEK-SGIRPD-QITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQ 677
Score = 172 bits (435), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 196/385 (50%), Gaps = 10/385 (2%)
Query: 97 LLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLIDEAHQVFDQMSNRT 156
LL+ C + G ++H + N + + ++L +YA G + ++F ++ R
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 157 AFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKACAGLGLIRVGEKV 216
+ PWNS+IS + G A+A YF+M GV PD TFP ++KAC L + + +
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFL 160
Query: 217 HLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISYNSMLTGYIHHGLL 276
G + FV ++L+ Y + G I +FDR+ KD + +N ML GY G L
Sbjct: 161 SDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGAL 220
Query: 277 VEAFDIFRGMILNGFDPDPV---AISSILANASLLRIGAQVHGWVLRRGVEWDLCIANSL 333
F M ++ P+ V + S+ A+ L+ +G Q+HG V+ GV+++ I NSL
Sbjct: 221 DSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSL 280
Query: 334 IVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAHSKD---HEALIYFEQMERDGVLPDH 390
+ +YSK G+ D A LF M + D V+WN +I + + E+L +F +M GVLPD
Sbjct: 281 LSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDA 340
Query: 391 LTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVNLYGRAGLIDEAYSMIV 450
+TF SLL + + +++ +++ ++ ++ IS + + +++ Y + + A ++
Sbjct: 341 ITFSSLLPSVSKFENLEYCKQIHCYIM-RHSISLDIFLTSALIDAYFKCRGVSMAQNIFS 399
Query: 451 EKMEFEASPVVWGALLYACYLHGNV 475
+ + VV+ A++ YLH +
Sbjct: 400 QCNSVDV--VVFTAMISG-YLHNGL 421
Score = 167 bits (424), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 199/395 (50%), Gaps = 11/395 (2%)
Query: 86 GITVQTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLIDEA 145
G++ TF L++ C LK + L + + + N+ ++S L++ Y +G ID
Sbjct: 133 GVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVP 192
Query: 146 HQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKACA 205
++FD++ + WN +++GYA+ G + I + M + + P+ TF VL CA
Sbjct: 193 SKLFDRVLQKDCVI--WNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCA 250
Query: 206 GLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISYNS 265
LI +G ++H V G F+G + N+L+ MY+KCG A +F + D +++N
Sbjct: 251 SKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNC 310
Query: 266 MLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSILANASL---LRIGAQVHGWVLRRG 322
M++GY+ GL+ E+ F MI +G PD + SS+L + S L Q+H +++R
Sbjct: 311 MISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHS 370
Query: 323 VEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAHSKDH---EALIYFE 379
+ D+ + ++LI Y K + A +F DVV + ++I + + ++L F
Sbjct: 371 ISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFR 430
Query: 380 QMERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVNLYGRA 439
+ + + P+ +T VS+L L ++K+G L +++K G R ++++Y +
Sbjct: 431 WLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKK-GFDNRCNIGCAVIDMYAKC 489
Query: 440 GLIDEAYSMIVEKMEFEASPVVWGALLYACYLHGN 474
G ++ AY I E++ + V W +++ C N
Sbjct: 490 GRMNLAYE-IFERLS-KRDIVSWNSMITRCAQSDN 522
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 261 bits (666), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 157/484 (32%), Positives = 266/484 (54%), Gaps = 18/484 (3%)
Query: 52 SSPTPLLTNQK----AFPKTKLQALDSIIQDLESSVQNGITVQTETFASLLETCYQLKAV 107
S P P+ + + FP L L + DLE S I + +LL+ C K +
Sbjct: 21 SLPAPVSEDSEDESLKFPSNDL-LLRTSSNDLEGSY---IPADRRFYNTLLKKCTVFKLL 76
Query: 108 EHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLIDEAHQVFDQMSNRTAFAFPWNSLIS 167
G +H I ++ R + + + LL +YA G ++EA +VF++M R W +LIS
Sbjct: 77 IQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVT--WTTLIS 134
Query: 168 GYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKACAGLGLIRVGEKVHLDAVRFGFGF 227
GY++ DA+ + QM G P++FT V+KA A G ++H V+ GF
Sbjct: 135 GYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDS 194
Query: 228 DGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISYNSMLTGYIHHGLLVEAFDIFRGMI 287
+ V +AL+D+Y + G + A+ VFD + +++ +S+N+++ G+ +A ++F+GM+
Sbjct: 195 NVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGML 254
Query: 288 LNGFDPDPVAISSILANAS---LLRIGAQVHGWVLRRGVEWDLCIANSLIVVYSKDGKLD 344
+GF P + +S+ S L G VH ++++ G + N+L+ +Y+K G +
Sbjct: 255 RDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIH 314
Query: 345 QACWLFDHMPQKDVVSWNSIIHA---HSKDHEALIYFEQMERDGVLPDHLTFVSLLSACA 401
A +FD + ++DVVSWNS++ A H EA+ +FE+M R G+ P+ ++F+S+L+AC+
Sbjct: 315 DARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACS 374
Query: 402 HLGSVKVGERLFSVMVEKYGISPRVEHYACMVNLYGRAGLIDEAYSMIVEKMEFEASPVV 461
H G + G + +M +K GI P HY +V+L GRAG ++ A I E+M E + +
Sbjct: 375 HSGLLDEGWHYYELM-KKDGIVPEAWHYVTVVDLLGRAGDLNRALRFI-EEMPIEPTAAI 432
Query: 462 WGALLYACYLHGNVCMGETAAQKLFELEPDNEHNFELLIKIYGNAGRLDDVERVERMLVD 521
W ALL AC +H N +G AA+ +FEL+PD+ +L IY + GR +D RV + + +
Sbjct: 433 WKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKE 492
Query: 522 RGLE 525
G++
Sbjct: 493 SGVK 496
>sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protein At2g22410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2
SV=1
Length = 681
Score = 260 bits (664), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 142/430 (33%), Positives = 241/430 (56%), Gaps = 40/430 (9%)
Query: 133 LRLYATFGLIDEAHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEP 192
+ ++A+ G ++ A +VFD+ R + WN LI+GY ++GE E AI +Y ME EGV+P
Sbjct: 198 IHMFASCGDMENARKVFDESPVRDLVS--WNCLINGYKKIGEAEKAIYVYKLMESEGVKP 255
Query: 193 DQFTFPRVLKACAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVF 252
D T ++ +C+ LG + G++ + G ++NAL+DM++KCGDI +AR +F
Sbjct: 256 DDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIF 315
Query: 253 DRIGNKDLISYNSMLTGYIHHGLL-------------------------------VEAFD 281
D + + ++S+ +M++GY GLL +A
Sbjct: 316 DNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALA 375
Query: 282 IFRGMILNGFDPDPVAISSILANAS---LLRIGAQVHGWVLRRGVEWDLCIANSLIVVYS 338
+F+ M + PD + + L+ S L +G +H ++ + + ++ + SL+ +Y+
Sbjct: 376 LFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYA 435
Query: 339 KDGKLDQACWLFDHMPQKDVVSWNSIIHA---HSKDHEALIYFEQMERDGVLPDHLTFVS 395
K G + +A +F + ++ +++ +II H A+ YF +M G+ PD +TF+
Sbjct: 436 KCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIG 495
Query: 396 LLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVNLYGRAGLIDEAYSMIVEKMEF 455
LLSAC H G ++ G FS M ++ ++P+++HY+ MV+L GRAGL++EA ++E M
Sbjct: 496 LLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEA-DRLMESMPM 554
Query: 456 EASPVVWGALLYACYLHGNVCMGETAAQKLFELEPDNEHNFELLIKIYGNAGRLDDVERV 515
EA VWGALL+ C +HGNV +GE AA+KL EL+P + + LL +YG A +D +R
Sbjct: 555 EADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRA 614
Query: 516 ERMLVDRGLE 525
RM+ +RG+E
Sbjct: 615 RRMMNERGVE 624
Score = 155 bits (392), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 131/498 (26%), Positives = 225/498 (45%), Gaps = 85/498 (17%)
Query: 96 SLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYA--TFGLIDEAHQVFDQMS 153
SLLE C K + H ++ + N L + SS+L+ A +D + ++ +
Sbjct: 58 SLLEKC---KLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIE 114
Query: 154 NRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGV---EPDQFTFPRVLKACAGLGLI 210
N F+ WN I G++E +++ LY QM G PD FT+P + K CA L L
Sbjct: 115 NPNIFS--WNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLS 172
Query: 211 RVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISYNSMLTGY 270
+G + ++ V NA + M+A CGD+ AR VFD +DL+S+N ++ GY
Sbjct: 173 SLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGY 232
Query: 271 IHHGLLVEAFDIFRGMILNGFDPDPVAISSILANASL---LRIGAQVHGWVLRRGVEWDL 327
G +A +++ M G PD V + ++++ S+ L G + + +V G+ +
Sbjct: 233 KKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTI 292
Query: 328 CIANSLIVVYSKDGKLDQA-------------CW------------------LFDHMPQK 356
+ N+L+ ++SK G + +A W LFD M +K
Sbjct: 293 PLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEK 352
Query: 357 DVVSWNSIIHAH---SKDHEALIYFEQMERDGVLPDHLTFVSLLSACAHLGSVKVGERLF 413
DVV WN++I + +AL F++M+ PD +T + LSAC+ LG++ VG +
Sbjct: 353 DVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIH 412
Query: 414 SVMVEKYGISPRVEHYACMVNLYGRAGLIDEA--------------YSMIV--------- 450
+EKY +S V +V++Y + G I EA Y+ I+
Sbjct: 413 RY-IEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDA 471
Query: 451 --------EKMEFEASP--VVWGALLYACYLHGNVCMGE---TAAQKLFELEPDNEHNFE 497
E ++ +P + + LL AC G + G + + F L P +H +
Sbjct: 472 STAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKH-YS 530
Query: 498 LLIKIYGNAGRLDDVERV 515
+++ + G AG L++ +R+
Sbjct: 531 IMVDLLGRAGLLEEADRL 548
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 144/324 (44%), Gaps = 54/324 (16%)
Query: 86 GITVQTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLIDEA 145
G+ T L+ +C L + G + + + N LR + + L+ +++ G I EA
Sbjct: 252 GVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEA 311
Query: 146 HQVFDQMSNRTAFAFPWNSLISGYAELG-------------------------------E 174
++FD + RT + W ++ISGYA G
Sbjct: 312 RRIFDNLEKRTIVS--WTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKR 369
Query: 175 YEDAIALYFQMEEEGVEPDQFTFPRVLKACAGLGLIRVGEKVHLDAVRFGFGFDGFVLNA 234
+DA+AL+ +M+ +PD+ T L AC+ LG + VG +H ++ + + +
Sbjct: 370 GQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTS 429
Query: 235 LVDMYAKCGDIVKARTVFDRIGNKDLISYNSMLTGYIHHGLLVEAFDIFRGMILNGFDPD 294
LVDMYAKCG+I +A +VF I ++ ++Y +++ G HG A F MI G PD
Sbjct: 430 LVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPD 489
Query: 295 PVAISSILANASLLRIGAQVHGWVLRRGVEW------------DLCIANSLIVVYSKDGK 342
+ +L+ A HG +++ G ++ L + ++ + + G
Sbjct: 490 EITFIGLLS--------ACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGL 541
Query: 343 LDQACWLFDHMP-QKDVVSWNSII 365
L++A L + MP + D W +++
Sbjct: 542 LEEADRLMESMPMEADAAVWGALL 565
Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 4/184 (2%)
Query: 93 TFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLIDEAHQVFDQM 152
T L C QL A++ GI +HR I L N + + L+ +YA G I EA VF +
Sbjct: 391 TMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGI 450
Query: 153 SNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKACAGLGLIRV 212
R + + ++I G A G+ AI+ + +M + G+ PD+ TF +L AC G+I+
Sbjct: 451 QTRNSLTY--TAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQT 508
Query: 213 GEKVHLD-AVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIG-NKDLISYNSMLTGY 270
G RF + +VD+ + G + +A + + + D + ++L G
Sbjct: 509 GRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGC 568
Query: 271 IHHG 274
HG
Sbjct: 569 RMHG 572
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 259 bits (663), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 163/490 (33%), Positives = 270/490 (55%), Gaps = 30/490 (6%)
Query: 52 SSPTPLLTNQKAFPKTKLQALDSIIQDLESSVQNGITVQTETFASLLETCYQLKAVEHGI 111
SSPT + Q P ++L + + + L G + + +LL C +A+ G
Sbjct: 14 SSPTNYVL-QTILPISQLCSNGRLQEALLEMAMLGPEMGFHGYDALLNACLDKRALRDGQ 72
Query: 112 KLH------RLIPTNLLRKNKGISSKLLRLYATFGLIDEAHQVFDQMSNRTAFAFPWNSL 165
++H R +P LR ++LL Y +++A +V D+M + + W ++
Sbjct: 73 RVHAHMIKTRYLPATYLR------TRLLIFYGKCDCLEDARKVLDEMPEKNVVS--WTAM 124
Query: 166 ISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKAC---AGLGLIRVGEKVHLDAVR 222
IS Y++ G +A+ ++ +M +P++FTF VL +C +GLGL G+++H V+
Sbjct: 125 ISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGL---GKQIHGLIVK 181
Query: 223 FGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISYNSMLTGYIHHGLLVEAFDI 282
+ + FV ++L+DMYAK G I +AR +F+ + +D++S +++ GY GL EA ++
Sbjct: 182 WNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEM 241
Query: 283 FRGMILNGFDPDPVAISSILANAS---LLRIGAQVHGWVLRRGVEWDLCIANSLIVVYSK 339
F + G P+ V +S+L S LL G Q H VLRR + + + NSLI +YSK
Sbjct: 242 FHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSK 301
Query: 340 DGKLDQACWLFDHMPQKDVVSWNSIIHAHSK---DHEALIYFEQM-ERDGVLPDHLTFVS 395
G L A LFD+MP++ +SWN+++ +SK E L F M + V PD +T ++
Sbjct: 302 CGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLA 361
Query: 396 LLSACAHLGSVKVGERLFSVMVE-KYGISPRVEHYACMVNLYGRAGLIDEAYSMIVEKME 454
+LS C+H G +F MV +YG P EHY C+V++ GRAG IDEA+ I ++M
Sbjct: 362 VLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFI-KRMP 420
Query: 455 FEASPVVWGALLYACYLHGNVCMGETAAQKLFELEPDNEHNFELLIKIYGNAGRLDDVER 514
+ + V G+LL AC +H +V +GE+ ++L E+EP+N N+ +L +Y +AGR DV
Sbjct: 421 SKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNN 480
Query: 515 VERMLVDRGL 524
V M++ + +
Sbjct: 481 VRAMMMQKAV 490
>sp|Q9LR69|PPR8_ARATH Pentatricopeptide repeat-containing protein At1g03540
OS=Arabidopsis thaliana GN=PCMP-E4 PE=2 SV=1
Length = 609
Score = 259 bits (662), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 146/467 (31%), Positives = 261/467 (55%), Gaps = 19/467 (4%)
Query: 66 KTKLQALDSIIQDLESSVQNGITVQTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKN 125
K ++AL+ ++ V G+ T +S ++ C +L V G H ++ T+ N
Sbjct: 142 KEHVKALEVFVE----MVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWN 197
Query: 126 KGISSKLLRLYATFGLIDEAHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQM 185
ISS L LY +A +VFD+M W +++S +++ YE+A+ L++ M
Sbjct: 198 HFISSTLAYLYGVNREPVDARRVFDEMPEPDVIC--WTAVLSAFSKNDLYEEALGLFYAM 255
Query: 186 EE-EGVEPDQFTFPRVLKACAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGD 244
+G+ PD TF VL AC L ++ G+++H + G G + V ++L+DMY KCG
Sbjct: 256 HRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGS 315
Query: 245 IVKARTVFDRIGNKDLISYNSMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSIL-- 302
+ +AR VF+ + K+ +S++++L GY +G +A +IFR M + D ++L
Sbjct: 316 VREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREM----EEKDLYCFGTVLKA 371
Query: 303 -ANASLLRIGAQVHGWVLRRGVEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSW 361
A + +R+G ++HG +RRG ++ + ++LI +Y K G +D A ++ M +++++W
Sbjct: 372 CAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITW 431
Query: 362 NSIIHA---HSKDHEALIYFEQMERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVE 418
N+++ A + + EA+ +F M + G+ PD+++F+++L+AC H G V G F +M +
Sbjct: 432 NAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAK 491
Query: 419 KYGISPRVEHYACMVNLYGRAGLIDEAYSMIVEKMEFEASPVVWGALLYACYLHGNVC-M 477
YGI P EHY+CM++L GRAGL +EA +++ E+ E +WG LL C + + +
Sbjct: 492 SYGIKPGTEHYSCMIDLLGRAGLFEEAENLL-ERAECRNDASLWGVLLGPCAANADASRV 550
Query: 478 GETAAQKLFELEPDNEHNFELLIKIYGNAGRLDDVERVERMLVDRGL 524
E A+++ ELEP ++ LL +Y GR D + +++V RG+
Sbjct: 551 AERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGV 597
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 133/477 (27%), Positives = 243/477 (50%), Gaps = 29/477 (6%)
Query: 48 SYPKSSPTPLLTNQKAFPKTKLQALDSIIQDLESSVQNGITVQTETFASLLETCYQLKAV 107
S S+PT + KL L I+ L S+ + I + +ASLL+TC ++ +
Sbjct: 21 SISSSAPTK---QSRILELCKLGQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSF 77
Query: 108 EHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGL-IDEAHQVFDQMSNRTAFAFPWNSLI 166
HGI+ H + + L ++ + + LL LY G + E +VFD + A + W S++
Sbjct: 78 IHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAIS--WTSMM 135
Query: 167 SGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKACAGLGLIRVGEKVHLDAVRFGFG 226
SGY E+ A+ ++ +M G++ ++FT +KAC+ LG +R+G H + GF
Sbjct: 136 SGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFE 195
Query: 227 FDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISYNSMLTGYIHHGLLVEAFDIFRGM 286
++ F+ + L +Y + V AR VFD + D+I + ++L+ + + L EA +F M
Sbjct: 196 WNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAM 255
Query: 287 ILN-GFDPDPVAISSIL---ANASLLRIGAQVHGWVLRRGVEWDLCIANSLIVVYSKDGK 342
G PD ++L N L+ G ++HG ++ G+ ++ + +SL+ +Y K G
Sbjct: 256 HRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGS 315
Query: 343 LDQACWLFDHMPQKDVVSWNSIIHAHSKDHE---ALIYFEQMERDGVLPDHLTFVSLLSA 399
+ +A +F+ M +K+ VSW++++ + ++ E A+ F +ME D F ++L A
Sbjct: 316 VREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEK----DLYCFGTVLKA 371
Query: 400 CAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVNLYGRAGLIDEAYSMIVEKMEFEASP 459
CA L +V++G+ + V + G V + +++LYG++G ID A S + KM +
Sbjct: 372 CAGLAAVRLGKEIHGQYVRR-GCFGNVIVESALIDLYGKSGCIDSA-SRVYSKMSIR-NM 428
Query: 460 VVWGALLYACYLHGNVCMGETAAQKLFEL-----EPDNEHNFELLIKIYGNAGRLDD 511
+ W A+L A +G GE A ++ +PD +F ++ G+ G +D+
Sbjct: 429 ITWNAMLSALAQNGR---GEEAVSFFNDMVKKGIKPD-YISFIAILTACGHTGMVDE 481
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 259 bits (662), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 146/434 (33%), Positives = 247/434 (56%), Gaps = 13/434 (2%)
Query: 84 QNGITVQTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLID 143
+ GI TF++ L+ C L A+E G+++H + + L+ +Y+ G I+
Sbjct: 100 RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRIN 159
Query: 144 EAHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVE--PDQFTFPRVL 201
EA +VF ++ +R+ + WN++I+G+ G A+ + M+E ++ PD+FT +L
Sbjct: 160 EAEKVFRRIVDRSLIS--WNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLL 217
Query: 202 KACAGLGLIRVGEKVHLDAVRFGFGF--DGFVLNALVDMYAKCGDIVKARTVFDRIGNKD 259
KAC+ G+I G+++H VR GF + +LVD+Y KCG + AR FD+I K
Sbjct: 218 KACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKT 277
Query: 260 LISYNSMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSIL---ANASLLRIGAQVHG 316
+IS++S++ GY G VEA +F+ + D A+SSI+ A+ +LLR G Q+
Sbjct: 278 MISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQA 337
Query: 317 WVLRRGVEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAHSK---DHE 373
++ + + NS++ +Y K G +D+A F M KDV+SW +I + K +
Sbjct: 338 LAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKK 397
Query: 374 ALIYFEQMERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACMV 433
++ F +M R + PD + ++++LSAC+H G +K GE LFS ++E +GI PRVEHYAC+V
Sbjct: 398 SVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVV 457
Query: 434 NLYGRAGLIDEAYSMIVEKMEFEASPVVWGALLYACYLHGNVCMGETAAQKLFELEPDNE 493
+L GRAG + EA +I + M + + +W LL C +HG++ +G+ + L ++ N
Sbjct: 458 DLLGRAGRLKEAKHLI-DTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNP 516
Query: 494 HNFELLIKIYGNAG 507
N+ ++ +YG AG
Sbjct: 517 ANYVMMSNLYGQAG 530
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 133/481 (27%), Positives = 234/481 (48%), Gaps = 62/481 (12%)
Query: 87 ITVQTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGI----SSKLLRLYATFGLI 142
I Q + S+L C + + G ++H LL+ G+ S+ L+ +Y
Sbjct: 2 IPNQRQNLVSILRVCTRKGLSDQGGQVH----CYLLKSGSGLNLITSNYLIDMYCKCREP 57
Query: 143 DEAHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLK 202
A++VFD M R + W++L+SG+ G+ + +++L+ +M +G+ P++FTF LK
Sbjct: 58 LMAYKVFDSMPERNVVS--WSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLK 115
Query: 203 ACAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLIS 262
AC L + G ++H ++ GF V N+LVDMY+KCG I +A VF RI ++ LIS
Sbjct: 116 ACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLIS 175
Query: 263 YNSMLTGYIHHGLLVEAFDIFRGMILNGF---DPDPVAISSILANAS---LLRIGAQVHG 316
+N+M+ G++H G +A D F GM+ PD ++S+L S ++ G Q+HG
Sbjct: 176 WNAMIAGFVHAGYGSKALDTF-GMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHG 234
Query: 317 WVLRRGVEW--DLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAHSKDH-- 372
+++R G I SL+ +Y K G L A FD + +K ++SW+S+I ++++
Sbjct: 235 FLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEF 294
Query: 373 -EALIYFEQMERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVE-KYGISPRVEHYA 430
EA+ F++++ D S++ A ++ G+++ ++ V+ G+ V
Sbjct: 295 VEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSV--LN 352
Query: 431 CMVNLYGRAGLIDEAYSMIVE---------------------------------KMEFEA 457
+V++Y + GL+DEA E + E
Sbjct: 353 SVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEP 412
Query: 458 SPVVWGALLYACYLHGNVCMGETAAQKLFE---LEPDNEHNFELLIKIYGNAGRLDDVER 514
V + A+L AC G + GE KL E ++P EH + ++ + G AGRL + +
Sbjct: 413 DEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEH-YACVVDLLGRAGRLKEAKH 471
Query: 515 V 515
+
Sbjct: 472 L 472
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 177/364 (48%), Gaps = 53/364 (14%)
Query: 93 TFASLLETCYQLKAVEHGIKLHRLIPTNLLR--KNKGISSKLLRLYATFGLIDEAHQVFD 150
T SLL+ C + G ++H + + + I+ L+ LY G + A + FD
Sbjct: 212 TLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFD 271
Query: 151 QMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKACAGLGLI 210
Q+ +T + W+SLI GYA+ GE+ +A+ L+ +++E + D F ++ A L+
Sbjct: 272 QIKEKTMIS--WSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALL 329
Query: 211 RVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISYNSMLTGY 270
R G+++ AV+ G + VLN++VDMY KCG + +A F + KD+IS+ ++TGY
Sbjct: 330 RQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGY 389
Query: 271 IHHGLLVEAFDIFRGMILNGFDPDPV---AISSILANASLLRIGAQV-------HGWVLR 320
HGL ++ IF M+ + +PD V A+ S +++ +++ G ++ HG ++
Sbjct: 390 GKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHG--IK 447
Query: 321 RGVEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAHSKDHEALIYFEQ 380
VE C+ + L + G+L +A L D MP K
Sbjct: 448 PRVEHYACVVDLL----GRAGRLKEAKHLIDTMPIK------------------------ 479
Query: 381 MERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVNLYGRAG 440
P+ + +LLS C G +++G+ + +++ +P +Y M NLYG+AG
Sbjct: 480 -------PNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNP--ANYVMMSNLYGQAG 530
Query: 441 LIDE 444
+E
Sbjct: 531 YWNE 534
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 259 bits (662), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 143/432 (33%), Positives = 236/432 (54%), Gaps = 35/432 (8%)
Query: 128 ISSKLLRLYATFGLIDEAHQVFDQMSNRTAFAF--------------------------- 160
+ S LL +YA G I +A +VF + +R +
Sbjct: 176 VGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDS 235
Query: 161 -PWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKACAGLGLIRVGEKVHLD 219
W ++I G A+ G ++AI + +M+ +G++ DQ+ F VL AC GLG I G+++H
Sbjct: 236 VSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHAC 295
Query: 220 AVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISYNSMLTGYIHHGLLVEA 279
+R F +V +AL+DMY KC + A+TVFDR+ K+++S+ +M+ GY G EA
Sbjct: 296 IIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEA 355
Query: 280 FDIFRGMILNGFDPDPVAIS---SILANASLLRIGAQVHGWVLRRGVEWDLCIANSLIVV 336
IF M +G DPD + S AN S L G+Q HG + G+ + ++NSL+ +
Sbjct: 356 VKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTL 415
Query: 337 YSKDGKLDQACWLFDHMPQKDVVSWNSIIHAHS---KDHEALIYFEQMERDGVLPDHLTF 393
Y K G +D + LF+ M +D VSW +++ A++ + E + F++M + G+ PD +T
Sbjct: 416 YGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTL 475
Query: 394 VSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVNLYGRAGLIDEAYSMIVEKM 453
++SAC+ G V+ G+R F +M +YGI P + HY+CM++L+ R+G ++EA I M
Sbjct: 476 TGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFI-NGM 534
Query: 454 EFEASPVVWGALLYACYLHGNVCMGETAAQKLFELEPDNEHNFELLIKIYGNAGRLDDVE 513
F + W LL AC GN+ +G+ AA+ L EL+P + + LL IY + G+ D V
Sbjct: 535 PFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVA 594
Query: 514 RVERMLVDRGLE 525
++ R + ++ ++
Sbjct: 595 QLRRGMREKNVK 606
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 148/293 (50%), Gaps = 8/293 (2%)
Query: 80 ESSVQNGITVQTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATF 139
E VQ G+ + F S+L C L A+ G ++H I + + + S L+ +Y
Sbjct: 260 EMKVQ-GLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKC 318
Query: 140 GLIDEAHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPR 199
+ A VFD+M + + W +++ GY + G E+A+ ++ M+ G++PD +T +
Sbjct: 319 KCLHYAKTVFDRMKQKNVVS--WTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQ 376
Query: 200 VLKACAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKD 259
+ ACA + + G + H A+ G V N+LV +Y KCGDI + +F+ + +D
Sbjct: 377 AISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRD 436
Query: 260 LISYNSMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSIL---ANASLLRIGAQVHG 316
+S+ +M++ Y G VE +F M+ +G PD V ++ ++ + A L+ G +
Sbjct: 437 AVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFK 496
Query: 317 WVLRR-GVEWDLCIANSLIVVYSKDGKLDQACWLFDHMP-QKDVVSWNSIIHA 367
+ G+ + + +I ++S+ G+L++A + MP D + W +++ A
Sbjct: 497 LMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSA 549
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 173/376 (46%), Gaps = 42/376 (11%)
Query: 130 SKLLRLYATFGLIDEAHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEE- 188
+ LL Y+ GLI E F+++ +R WN LI GY+ G A+ Y M +
Sbjct: 76 NNLLLAYSKAGLISEMESTFEKLPDRDGVT--WNVLIEGYSLSGLVGAAVKAYNTMMRDF 133
Query: 189 GVEPDQFTFPRVLKACAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKA 248
+ T +LK + G + +G+++H ++ GF V + L+ MYA G I A
Sbjct: 134 SANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDA 193
Query: 249 RTVFDRIGNKDLISYNSMLTGYIHHGLLVEAFDIFRG----------------------- 285
+ VF + +++ + YNS++ G + G++ +A +FRG
Sbjct: 194 KKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKE 253
Query: 286 -------MILNGFDPDPVAISSIL---ANASLLRIGAQVHGWVLRRGVEWDLCIANSLIV 335
M + G D S+L + G Q+H ++R + + + ++LI
Sbjct: 254 AIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALID 313
Query: 336 VYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAH---SKDHEALIYFEQMERDGVLPDHLT 392
+Y K L A +FD M QK+VVSW +++ + + EA+ F M+R G+ PDH T
Sbjct: 314 MYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYT 373
Query: 393 FVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVNLYGRAGLIDEAYSMIVEK 452
+SACA++ S++ G + + G+ V +V LYG+ G ID++ + E
Sbjct: 374 LGQAISACANVSSLEEGSQFHGKAITS-GLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEM 432
Query: 453 MEFEASPVVWGALLYA 468
+A V W A++ A
Sbjct: 433 NVRDA--VSWTAMVSA 446
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 136/312 (43%), Gaps = 53/312 (16%)
Query: 84 QNGITVQTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLID 143
++GI T + C + ++E G + H T+ L +S+ L+ LY G ID
Sbjct: 364 RSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDID 423
Query: 144 EAHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKA 203
++ ++F++M+ R A + W +++S YA+ G + I L+ +M + G++PD T V+ A
Sbjct: 424 DSTRLFNEMNVRDAVS--WTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISA 481
Query: 204 CAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISY 263
C+ GL+ G++ F L M ++ G + IG+ Y
Sbjct: 482 CSRAGLVEKGQRY-------------FKL-----MTSEYG-------IVPSIGH-----Y 511
Query: 264 NSMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSILA---NASLLRIGAQVHGWVLR 320
+ M+ + G L EA GM F PD + +++L+ N L IG W
Sbjct: 512 SCMIDLFSRSGRLEEAMRFINGM---PFPPDAIGWTTLLSACRNKGNLEIGK----WAAE 564
Query: 321 RGVEWD---LCIANSLIVVYSKDGKLDQACWLFDHMPQKDV--------VSWNSIIHAHS 369
+E D L +Y+ GK D L M +K+V + W +H+ S
Sbjct: 565 SLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFS 624
Query: 370 KDHEALIYFEQM 381
D E+ Y +Q+
Sbjct: 625 ADDESSPYLDQI 636
Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 154/361 (42%), Gaps = 79/361 (21%)
Query: 201 LKACAGLGL---IRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGN 257
+K C GLG R + +H + +R + F+ N +V YA AR VFDRI
Sbjct: 10 IKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQ 69
Query: 258 KDLISYNSMLTGYIHHGLLVEAFDIFR----------GMILNGFDPDPVAISSILANASL 307
+L S+N++L Y GL+ E F +++ G+ + +++ A ++
Sbjct: 70 PNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM 129
Query: 308 LR-------------------------IGAQVHGWVLRRGVEWDL--------------C 328
+R +G Q+HG V++ G E L C
Sbjct: 130 MRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGC 189
Query: 329 IANSLIVVYSKD-----------------GKLDQACWLFDHMPQKDVVSWNSIIHAHSKD 371
I+++ V Y D G ++ A LF M +KD VSW ++I +++
Sbjct: 190 ISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQN 248
Query: 372 ---HEALIYFEQMERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEH 428
EA+ F +M+ G+ D F S+L AC LG++ G+++ + ++ + +
Sbjct: 249 GLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACII-RTNFQDHIYV 307
Query: 429 YACMVNLYGRAGLIDEAYSMIVEKMEFEASPVVWGALLYACYLHGNVCMGETAAQKLFEL 488
+ ++++Y + + A + + ++M+ + + V W A++ +G E A + ++
Sbjct: 308 GSALIDMYCKCKCLHYAKT-VFDRMK-QKNVVSWTAMVVG---YGQTGRAEEAVKIFLDM 362
Query: 489 E 489
+
Sbjct: 363 Q 363
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 258 bits (660), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 144/392 (36%), Positives = 234/392 (59%), Gaps = 10/392 (2%)
Query: 139 FGLIDEAHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFP 198
FG ID +VF+ M + ++ N++I+GYA+ G YEDA+ + +M ++PD FT
Sbjct: 190 FG-IDSVRRVFEVMPRKDVVSY--NTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLS 246
Query: 199 RVLKACAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNK 258
VL + + G+++H +R G D ++ ++LVDMYAK I + VF R+ +
Sbjct: 247 SVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCR 306
Query: 259 DLISYNSMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSIL---ANASLLRIGAQVH 315
D IS+NS++ GY+ +G EA +FR M+ P VA SS++ A+ + L +G Q+H
Sbjct: 307 DGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLH 366
Query: 316 GWVLRRGVEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSII--HA-HSKDH 372
G+VLR G ++ IA++L+ +YSK G + A +FD M D VSW +II HA H H
Sbjct: 367 GYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGH 426
Query: 373 EALIYFEQMERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACM 432
EA+ FE+M+R GV P+ + FV++L+AC+H+G V F+ M + YG++ +EHYA +
Sbjct: 427 EAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAV 486
Query: 433 VNLYGRAGLIDEAYSMIVEKMEFEASPVVWGALLYACYLHGNVCMGETAAQKLFELEPDN 492
+L GRAG ++EAY+ I KM E + VW LL +C +H N+ + E A+K+F ++ +N
Sbjct: 487 ADLLGRAGKLEEAYNFI-SKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSEN 545
Query: 493 EHNFELLIKIYGNAGRLDDVERVERMLVDRGL 524
+ L+ +Y + GR ++ ++ + +GL
Sbjct: 546 MGAYVLMCNMYASNGRWKEMAKLRLRMRKKGL 577
Score = 159 bits (402), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 117/422 (27%), Positives = 208/422 (49%), Gaps = 50/422 (11%)
Query: 96 SLLETCYQLKAVEHGIKLH-RLIPTNLLRKNKGISSKLLRLYATFGLIDEAHQVFDQMSN 154
+L++ ++K+ +LH + I T L +S ++ +Y L+ EA +F + +
Sbjct: 10 TLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTS--ASIVISIYTNLKLLHEALLLFKTLKS 67
Query: 155 RTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKACAGLGLIRVGE 214
A W S+I + + + A+A + +M G PD FP VLK+C + +R GE
Sbjct: 68 PPVLA--WKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGE 125
Query: 215 KVHLDAVRFGFGFDGFVLNALVDMYAK-----------------------CGD------- 244
VH VR G D + NAL++MYAK GD
Sbjct: 126 SVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAET 185
Query: 245 ------IVKARTVFDRIGNKDLISYNSMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAI 298
I R VF+ + KD++SYN+++ GY G+ +A + R M PD +
Sbjct: 186 CIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTL 245
Query: 299 SSILANASL---LRIGAQVHGWVLRRGVEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQ 355
SS+L S + G ++HG+V+R+G++ D+ I +SL+ +Y+K +++ + +F +
Sbjct: 246 SSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYC 305
Query: 356 KDVVSWNSIIHAHSKD---HEALIYFEQMERDGVLPDHLTFVSLLSACAHLGSVKVGERL 412
+D +SWNS++ + ++ +EAL F QM V P + F S++ ACAHL ++ +G++L
Sbjct: 306 RDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQL 365
Query: 413 FSVMVEKYGISPRVEHYACMVNLYGRAGLIDEAYSMIVEKMEFEASPVVWGALLYACYLH 472
++ + G + + +V++Y + G I +A I ++M V W A++ LH
Sbjct: 366 HGYVL-RGGFGSNIFIASALVDMYSKCGNI-KAARKIFDRMNV-LDEVSWTAIIMGHALH 422
Query: 473 GN 474
G+
Sbjct: 423 GH 424
Score = 142 bits (358), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 173/356 (48%), Gaps = 39/356 (10%)
Query: 93 TFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLIDEAHQVFDQM 152
T +S+L + V G ++H + + + I S L+ +YA I+++ +VF ++
Sbjct: 244 TLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRL 303
Query: 153 SNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKACAGLGLIRV 212
R + WNSL++GY + G Y +A+ L+ QM V+P F V+ ACA L + +
Sbjct: 304 YCRDGIS--WNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHL 361
Query: 213 GEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISYNSMLTGYIH 272
G+++H +R GFG + F+ +ALVDMY+KCG+I AR +FDR+ D +S+ +++ G+
Sbjct: 362 GKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHAL 421
Query: 273 HGLLVEAFDIFRGMILNGFDPDPVAISSILANASLLRIGAQVHGWVLRRGVEWDLCIANS 332
HG EA +F M G P+ VA ++L S + + + G+ NS
Sbjct: 422 HGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYF------------NS 469
Query: 333 LIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAHSKDHEALIYFEQMERDGVLPDHLT 392
+ VY + +L+ + D ++ K EA + +M V P
Sbjct: 470 MTKVYGLNQELEHYAAVAD------------LLGRAGKLEEAYNFISKM---CVEPTGSV 514
Query: 393 FVSLLSACAHLGSV----KVGERLFSVMVEKYGISPRVEHYACMVNLYGRAGLIDE 444
+ +LLS+C+ ++ KV E++F+V E G Y M N+Y G E
Sbjct: 515 WSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGA------YVLMCNMYASNGRWKE 564
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 258 bits (660), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 149/445 (33%), Positives = 246/445 (55%), Gaps = 61/445 (13%)
Query: 129 SSKLLRLYATFGL----IDEAHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIAL--- 181
++++LR AT L +D AH++F+QM R F+ WN++I G++E E + IA+
Sbjct: 58 AAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFS--WNTIIRGFSESDEDKALIAITLF 115
Query: 182 YFQMEEEGVEPDQFTFPRVLKACAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAK 241
Y M +E VEP++FTFP VLKACA G I+ G+++H A+++GFG D FV++ LV MY
Sbjct: 116 YEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVM 175
Query: 242 C---------------------------------------------GDIVKARTVFDRIG 256
C GD AR +FD++
Sbjct: 176 CGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMR 235
Query: 257 NKDLISYNSMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSILANASL---LRIGAQ 313
+ ++S+N+M++GY +G +A ++FR M P+ V + S+L S L +G
Sbjct: 236 QRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEW 295
Query: 314 VHGWVLRRGVEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHA---HSK 370
+H + G+ D + ++LI +YSK G +++A +F+ +P+++V++W+++I+ H +
Sbjct: 296 LHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQ 355
Query: 371 DHEALIYFEQMERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYA 430
+A+ F +M + GV P + +++LL+AC+H G V+ G R FS MV G+ PR+EHY
Sbjct: 356 AGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYG 415
Query: 431 CMVNLYGRAGLIDEAYSMIVEKMEFEASPVVWGALLYACYLHGNVCMGETAAQKLFELEP 490
CMV+L GR+GL+DEA I+ M + V+W ALL AC + GNV MG+ A L ++ P
Sbjct: 416 CMVDLLGRSGLLDEAEEFIL-NMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVP 474
Query: 491 DNEHNFELLIKIYGNAGRLDDVERV 515
+ + L +Y + G +V +
Sbjct: 475 HDSGAYVALSNMYASQGNWSEVSEM 499
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 66/123 (53%), Gaps = 2/123 (1%)
Query: 93 TFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLIDEAHQVFDQM 152
T S+L +L ++E G LH + +R + + S L+ +Y+ G+I++A VF+++
Sbjct: 276 TLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERL 335
Query: 153 SNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKACAGLGLIRV 212
W+++I+G+A G+ DAI + +M + GV P + +L AC+ GL+
Sbjct: 336 PRENVIT--WSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEE 393
Query: 213 GEK 215
G +
Sbjct: 394 GRR 396
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 258 bits (660), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 151/448 (33%), Positives = 248/448 (55%), Gaps = 9/448 (2%)
Query: 84 QNGITVQTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLID 143
++G+ + TF +L+ C + + + GI LH L+ + + LL +Y+ G ++
Sbjct: 104 KHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLN 163
Query: 144 EAHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKA 203
+AH++FD++ +R+ W +L SGY G + +AI L+ +M E GV+PD + +VL A
Sbjct: 164 DAHKLFDEIPDRSVVT--WTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSA 221
Query: 204 CAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISY 263
C +G + GE + + FV LV++YAKCG + KAR+VFD + KD++++
Sbjct: 222 CVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTW 281
Query: 264 NSMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSILAN-ASL--LRIGAQVHGWVLR 320
++M+ GY + E ++F M+ PD +I L++ ASL L +G + R
Sbjct: 282 STMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDR 341
Query: 321 RGVEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAHSKD-HEALIY-- 377
+L +AN+LI +Y+K G + + +F M +KD+V N+ I +K+ H L +
Sbjct: 342 HEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAV 401
Query: 378 FEQMERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVNLYG 437
F Q E+ G+ PD TF+ LL C H G ++ G R F+ + Y + VEHY CMV+L+G
Sbjct: 402 FGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWG 461
Query: 438 RAGLIDEAYSMIVEKMEFEASPVVWGALLYACYLHGNVCMGETAAQKLFELEPDNEHNFE 497
RAG++D+AY +I + M + +VWGALL C L + + ET ++L LEP N N+
Sbjct: 462 RAGMLDDAYRLICD-MPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYV 520
Query: 498 LLIKIYGNAGRLDDVERVERMLVDRGLE 525
L IY GR D+ V M+ +G++
Sbjct: 521 QLSNIYSVGGRWDEAAEVRDMMNKKGMK 548
Score = 143 bits (360), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 165/303 (54%), Gaps = 11/303 (3%)
Query: 160 FPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKACAGLGLIRVGEKVHLD 219
F +NSLI+G+ + + + L+ + + G+ FTFP VLKAC ++G +H
Sbjct: 77 FLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSL 136
Query: 220 AVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISYNSMLTGYIHHGLLVEA 279
V+ GF D + +L+ +Y+ G + A +FD I ++ ++++ ++ +GY G EA
Sbjct: 137 VVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREA 196
Query: 280 FDIFRGMILNGFDPDPVAISSILANASLLRIGAQVHG-WVLRRGVEWDL----CIANSLI 334
D+F+ M+ G PD I +L ++ + +G G W+++ E ++ + +L+
Sbjct: 197 IDLFKKMVEMGVKPDSYFIVQVL--SACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLV 254
Query: 335 VVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAHSKD---HEALIYFEQMERDGVLPDHL 391
+Y+K GK+++A +FD M +KD+V+W+++I ++ + E + F QM ++ + PD
Sbjct: 255 NLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQF 314
Query: 392 TFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVNLYGRAGLIDEAYSMIVE 451
+ V LS+CA LG++ +GE S +++++ + ++++Y + G + + + E
Sbjct: 315 SIVGFLSSCASLGALDLGEWGIS-LIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKE 373
Query: 452 KME 454
E
Sbjct: 374 MKE 376
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 168/372 (45%), Gaps = 49/372 (13%)
Query: 83 VQNGITVQTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLI 142
V+ G+ + +L C + ++ G + + + ++KN + + L+ LYA G +
Sbjct: 204 VEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKM 263
Query: 143 DEAHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLK 202
++A VFD M + W+++I GYA ++ I L+ QM +E ++PDQF+ L
Sbjct: 264 EKARSVFDSMVEKDIVT--WSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLS 321
Query: 203 ACAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLIS 262
+CA LG + +GE R F + F+ NAL+DMYAKCG + + VF + KD++
Sbjct: 322 SCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVI 381
Query: 263 YNSMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSILA---NASLLRIGAQVHG--- 316
N+ ++G +G + +F +F G PD +L +A L++ G +
Sbjct: 382 MNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAIS 441
Query: 317 --WVLRRGVEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAHSKDHEA 374
+ L+R VE C+ + ++ + G LD A L MP +
Sbjct: 442 CVYALKRTVEHYGCMVD----LWGRAGMLDDAYRLICDMPMR------------------ 479
Query: 375 LIYFEQMERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISP-RVEHYACMV 433
P+ + + +LLS C + ++ E +V+ E + P +Y +
Sbjct: 480 -------------PNAIVWGALLSGCRLVKDTQLAE---TVLKELIALEPWNAGNYVQLS 523
Query: 434 NLYGRAGLIDEA 445
N+Y G DEA
Sbjct: 524 NIYSVGGRWDEA 535
>sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protein At4g37170
OS=Arabidopsis thaliana GN=PCMP-H5 PE=3 SV=1
Length = 691
Score = 258 bits (659), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 151/470 (32%), Positives = 258/470 (54%), Gaps = 41/470 (8%)
Query: 93 TFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLIDEAHQVFDQM 152
T+ +L++ C Q +A+E G K+H I T+ I ++LLR+YA G + +A +VFD+M
Sbjct: 87 TYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEM 146
Query: 153 SNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEE------------------------ 188
NR + WN +++GYAE+G E+A L+ +M E+
Sbjct: 147 PNRDLCS--WNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVL 204
Query: 189 --------GVEPDQFTFPRVLKACAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYA 240
P+ FT + A A + IR G+++H VR G D + ++L+DMY
Sbjct: 205 YSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYG 264
Query: 241 KCGDIVKARTVFDRIGNKDLISYNSMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAISS 300
KCG I +AR +FD+I KD++S+ SM+ Y E F +F ++ + P+ +
Sbjct: 265 KCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAG 324
Query: 301 IL---ANASLLRIGAQVHGWVLRRGVEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQKD 357
+L A+ + +G QVHG++ R G + ++SL+ +Y+K G ++ A + D P+ D
Sbjct: 325 VLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPD 384
Query: 358 VVSWNSIIHAHSKD---HEALIYFEQMERDGVLPDHLTFVSLLSACAHLGSVKVGERLFS 414
+VSW S+I +++ EAL YF+ + + G PDH+TFV++LSAC H G V+ G F
Sbjct: 385 LVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFY 444
Query: 415 VMVEKYGISPRVEHYACMVNLYGRAGLIDEAYSMIVEKMEFEASPVVWGALLYACYLHGN 474
+ EK+ +S +HY C+V+L R+G ++ S+I E M + S +W ++L C +GN
Sbjct: 445 SITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISE-MPMKPSKFLWASVLGGCSTYGN 503
Query: 475 VCMGETAAQKLFELEPDNEHNFELLIKIYGNAGRLDDVERVERMLVDRGL 524
+ + E AAQ+LF++EP+N + + IY AG+ ++ ++ + + + G+
Sbjct: 504 IDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGV 553
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 166/390 (42%), Gaps = 62/390 (15%)
Query: 72 LDSIIQDLESSVQNGITVQTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSK 131
L S++Q + +S N TV A+ C + G ++H I L ++ + S
Sbjct: 204 LYSLMQRVPNSRPNIFTVSIAVAAAAAVKC-----IRRGKEIHGHIVRAGLDSDEVLWSS 258
Query: 132 LLRLYATFGLIDEAHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVE 191
L+ +Y G IDEA +FD++ + + W S+I Y + + + +L+ ++
Sbjct: 259 LMDMYGKCGCIDEARNIFDKIVEKDVVS--WTSMIDRYFKSSRWREGFSLFSELVGSCER 316
Query: 192 PDQFTFPRVLKACAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTV 251
P+++TF VL ACA L +G++VH R GF F ++LVDMY KCG+I A+ V
Sbjct: 317 PNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHV 376
Query: 252 FDRIGNKDLISYNSMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSILANASLLRIG 311
D DL+S+ S++ G +G EA F ++ +G PD V ++L+
Sbjct: 377 VDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLS-------- 428
Query: 312 AQVHGWVLRRGVEWDLCIA------------NSLIVVYSKDGKLDQACWLFDHMPQKDVV 359
A H ++ +G+E+ I L+ + ++ G+ +Q + MP K
Sbjct: 429 ACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMK--- 485
Query: 360 SWNSIIHAHSKDHEALIYFEQMERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEK 419
P + S+L C+ G++ + E E
Sbjct: 486 ----------------------------PSKFLWASVLGGCSTYGNIDLAE---EAAQEL 514
Query: 420 YGISPRVE-HYACMVNLYGRAGLIDEAYSM 448
+ I P Y M N+Y AG +E M
Sbjct: 515 FKIEPENPVTYVTMANIYAAAGKWEEEGKM 544
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 177/386 (45%), Gaps = 75/386 (19%)
Query: 191 EPDQFTFPRVLKACAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKART 250
+P T+ +++ C+ + G+KVH GF + N L+ MYAKCG +V AR
Sbjct: 82 KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARK 141
Query: 251 VFDRIGNKDLISYN-------------------------------SMLTGYIHHGLLVEA 279
VFD + N+DL S+N +M+TGY+ EA
Sbjct: 142 VFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEA 201
Query: 280 FDIFRGMI-LNGFDPDPVAIS---SILANASLLRIGAQVHGWVLRRGVEWDLCIANSLIV 335
++ M + P+ +S + A +R G ++HG ++R G++ D + +SL+
Sbjct: 202 LVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMD 261
Query: 336 VYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAH---SKDHEALIYFEQMERDGVLPDHLT 392
+Y K G +D+A +FD + +KDVVSW S+I + S+ E F ++ P+ T
Sbjct: 262 MYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYT 321
Query: 393 FVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVNLYGRAGLIDEAYSMIVEK 452
F +L+ACA L + ++G+++ M + G P + +V++Y + G I+ A ++
Sbjct: 322 FAGVLNACADLTTEELGKQVHGYMT-RVGFDPYSFASSSLVDMYTKCGNIESAKHVV--- 377
Query: 453 MEFEASP----VVWGALLYACYLHGNVCMGETAAQKLFELEPDNE-HNFELLIKIYGNAG 507
+ P V W +L+ C +G +PD F+LL+K +
Sbjct: 378 ---DGCPKPDLVSWTSLIGGCAQNG---------------QPDEALKYFDLLLK---SGT 416
Query: 508 RLDDVERVERM-------LVDRGLEF 526
+ D V V + LV++GLEF
Sbjct: 417 KPDHVTFVNVLSACTHAGLVEKGLEF 442
>sp|Q9C9I6|PP116_ARATH Pentatricopeptide repeat-containing protein At1g71490
OS=Arabidopsis thaliana GN=PCMP-E67 PE=2 SV=1
Length = 681
Score = 257 bits (657), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 164/512 (32%), Positives = 266/512 (51%), Gaps = 45/512 (8%)
Query: 56 PLLTNQKAFPKTKLQALDSIIQDLESSVQNGITVQTETFASLLETCYQLKAVEHGIKLHR 115
PL N K + + +I + V GI T+ S+L+ C + V G +H
Sbjct: 109 PLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHG 168
Query: 116 LIPTNLLRKNKGISSKLLRLYATFGLIDEAHQVFDQMSNRTAFAFPWNSLISGYAELGEY 175
I + + + + + L+ +Y F + A ++FD+M R A + WN++I+ YA G +
Sbjct: 169 SIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVS--WNAVINCYASEGMW 226
Query: 176 EDAIALYFQMEEEGVEPDQFT--------------------------FPRVL-------- 201
+A L+ +M GVE T FP L
Sbjct: 227 SEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIG 286
Query: 202 -KACAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDL 260
KAC+ +G IR+G+++H A+ + V N L+ MY+KC D+ A VF + L
Sbjct: 287 LKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSL 346
Query: 261 ISYNSMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSIL---ANASLLRIGAQVHGW 317
++NS+++GY EA + R M++ GF P+ + ++SIL A + L+ G + H +
Sbjct: 347 CTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCY 406
Query: 318 VLRRGVEWDLCIA-NSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAHSKDHE--- 373
+LRR D + NSL+ VY+K GK+ A + D M ++D V++ S+I + E
Sbjct: 407 ILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGV 466
Query: 374 ALIYFEQMERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACMV 433
AL F++M R G+ PDH+T V++LSAC+H V GERLF M +YGI P ++H++CMV
Sbjct: 467 ALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMV 526
Query: 434 NLYGRAGLIDEAYSMIVEKMEFEASPVVWGALLYACYLHGNVCMGETAAQKLFELEPDNE 493
+LYGRAG + +A I+ M ++ S W LL AC++HGN +G+ AA+KL E++P+N
Sbjct: 527 DLYGRAGFLAKAKD-IIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENP 585
Query: 494 HNFELLIKIYGNAGRLDDVERVERMLVDRGLE 525
+ L+ +Y AG + V ++ D G++
Sbjct: 586 GYYVLIANMYAAAGSWSKLAEVRTIMRDLGVK 617
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 12/215 (5%)
Query: 200 VLKACAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKD 259
+L AC + G +VH + G + ++ LV Y+ +A+++ I N D
Sbjct: 49 LLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSI---IENSD 105
Query: 260 LI---SYNSMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSIL-ANASLLRI--GAQ 313
++ +N ++ Y + L E ++ M+ G PD S+L A L + G
Sbjct: 106 ILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRV 165
Query: 314 VHGWVLRRGVEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAHSKD-- 371
VHG + + L + N+LI +Y + + A LFD M ++D VSWN++I+ ++ +
Sbjct: 166 VHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGM 225
Query: 372 -HEALIYFEQMERDGVLPDHLTFVSLLSACAHLGS 405
EA F++M GV +T+ + C G+
Sbjct: 226 WSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGN 260
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 255 bits (652), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 145/450 (32%), Positives = 241/450 (53%), Gaps = 7/450 (1%)
Query: 81 SSVQNGITVQTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFG 140
S +++G + +F +L++C L G +LH + + + L+ +Y G
Sbjct: 43 SMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCG 102
Query: 141 LIDEAHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRV 200
L+ +A +VF++ + + +N+LISGY + DA ++ +M+E GV D T +
Sbjct: 103 LVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGL 162
Query: 201 LKACAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDL 260
+ C + +G +H V+ G + VLN+ + MY KCG + R +FD + K L
Sbjct: 163 VPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGL 222
Query: 261 ISYNSMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSILANASLL---RIGAQVHGW 317
I++N++++GY +GL + +++ M +G PDP + S+L++ + L +IG +V
Sbjct: 223 ITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKL 282
Query: 318 VLRRGVEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHA---HSKDHEA 374
V G ++ ++N+ I +Y++ G L +A +FD MP K +VSW ++I H
Sbjct: 283 VESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIG 342
Query: 375 LIYFEQMERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVN 434
L+ F+ M + G+ PD FV +LSAC+H G G LF M +Y + P EHY+C+V+
Sbjct: 343 LMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVD 402
Query: 435 LYGRAGLIDEAYSMIVEKMEFEASPVVWGALLYACYLHGNVCMGETAAQKLFELEPDNEH 494
L GRAG +DEA I E M E VWGALL AC +H NV M E A K+ E EP+N
Sbjct: 403 LLGRAGRLDEAMEFI-ESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIG 461
Query: 495 NFELLIKIYGNAGRLDDVERVERMLVDRGL 524
+ L+ IY ++ + + R+ M+ +R
Sbjct: 462 YYVLMSNIYSDSKNQEGIWRIRVMMRERAF 491
Score = 193 bits (490), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 128/412 (31%), Positives = 211/412 (51%), Gaps = 59/412 (14%)
Query: 161 PWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKACAGLGLIRVGEKVHLDA 220
PWN + A + ++I+LY M G PD F+FP +LK+CA L L G+++H
Sbjct: 20 PWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHV 79
Query: 221 VRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLIS--YNSMLTGYIHHGLLVE 278
+ G + FVL AL+ MY KCG + AR VF+ +S YN++++GY + + +
Sbjct: 80 TKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTD 139
Query: 279 AFDIFRGMILNGFDPDPVAISSILANASL---LRIGAQVHGWVLRRGVEWDLCIANSLIV 335
A +FR M G D V + ++ ++ L +G +HG ++ G++ ++ + NS I
Sbjct: 140 AAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFIT 199
Query: 336 VYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAHSKD---HEALIYFEQMERDGVLPDHLT 392
+Y K G ++ LFD MP K +++WN++I +S++ ++ L +EQM+ GV PD T
Sbjct: 200 MYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFT 259
Query: 393 FVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVNLYGRAGLIDEAYSMIVEK 452
VS+LS+CAHLG+ K+G + +VE G P V +++Y R G + +A + + +
Sbjct: 260 LVSVLSSCAHLGAKKIGHEV-GKLVESNGFVPNVFVSNASISMYARCGNLAKARA-VFDI 317
Query: 453 MEFEASPVVWGALLYACY-LHGNVCMGET------------------------------- 480
M + S V W A++ CY +HG MGE
Sbjct: 318 MPVK-SLVSWTAMI-GCYGMHG---MGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSG 372
Query: 481 ----------AAQKLFELEPDNEHNFELLIKIYGNAGRLDD-VERVERMLVD 521
A ++ ++LEP EH + L+ + G AGRLD+ +E +E M V+
Sbjct: 373 LTDKGLELFRAMKREYKLEPGPEH-YSCLVDLLGRAGRLDEAMEFIESMPVE 423
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 2/139 (1%)
Query: 75 IIQDLESSVQNGITVQTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLR 134
+++ E +G+ T S+L +C L A + G ++ +L+ +N N +S+ +
Sbjct: 241 VLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASIS 300
Query: 135 LYATFGLIDEAHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQ 194
+YA G + +A VFD M ++ + W ++I Y G E + L+ M + G+ PD
Sbjct: 301 MYARCGNLAKARAVFDIMPVKSLVS--WTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDG 358
Query: 195 FTFPRVLKACAGLGLIRVG 213
F VL AC+ GL G
Sbjct: 359 AVFVMVLSACSHSGLTDKG 377
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 255 bits (651), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 154/442 (34%), Positives = 246/442 (55%), Gaps = 13/442 (2%)
Query: 89 VQTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLIDEAHQV 148
V T +SL T Y V G ++H + N L +S+ L+ +Y+ ++EA ++
Sbjct: 223 VFTAVLSSLAATIY----VGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKM 278
Query: 149 FDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKACAGLG 208
FD +R + W+++++GY++ GE +A+ L+ +M G++P ++T VL AC+ +
Sbjct: 279 FDSSGDRNSIT--WSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDIC 336
Query: 209 LIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISYNSMLT 268
+ G+++H ++ GF F ALVDMYAK G + AR FD + +D+ + S+++
Sbjct: 337 YLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLIS 396
Query: 269 GYIHHGLLVEAFDIFRGMILNGFDP-DPVAISSILANASL--LRIGAQVHGWVLRRGVEW 325
GY+ + EA ++R M G P DP S + A +SL L +G QVHG ++ G
Sbjct: 397 GYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGL 456
Query: 326 DLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAHSKD---HEALIYFEQME 382
++ I ++L +YSK G L+ +F P KDVVSWN++I S + EAL FE+M
Sbjct: 457 EVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEML 516
Query: 383 RDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVNLYGRAGLI 442
+G+ PD +TFV+++SAC+H G V+ G F++M ++ G+ P+V+HYACMV+L RAG +
Sbjct: 517 AEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQL 576
Query: 443 DEAYSMIVEKMEFEASPVVWGALLYACYLHGNVCMGETAAQKLFELEPDNEHNFELLIKI 502
EA I E + +W LL AC HG +G A +KL L + L I
Sbjct: 577 KEAKEFI-ESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGI 635
Query: 503 YGNAGRLDDVERVERMLVDRGL 524
Y GR+ DVERV + + G+
Sbjct: 636 YTALGRMRDVERVWKHMRANGV 657
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/421 (28%), Positives = 216/421 (51%), Gaps = 37/421 (8%)
Query: 93 TFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLIDEAHQVFDQM 152
T A + + L++ G + H L+ + + + L+ +Y GL+++ +VF M
Sbjct: 120 TLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYM 179
Query: 153 SNRTAFAFPWNSLISGYAELGEYEDAIA---LYFQMEEEGVEPDQFTFPRVLKACAGLGL 209
R + W++++SGYA G E+AI L+ + +EEG + D + F VL + A
Sbjct: 180 PERN--TYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSD-YVFTAVLSSLAATIY 236
Query: 210 IRVGEKVHLDAVRFGFGFDGFVL--NALVDMYAKCGDIVKARTVFDRIGNKDLISYNSML 267
+ +G ++H ++ G GFV NALV MY+KC + +A +FD G+++ I++++M+
Sbjct: 237 VGLGRQIHCITIK--NGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMV 294
Query: 268 TGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSILANAS---LLRIGAQVHGWVLRRGVE 324
TGY +G +EA +F M G P I +L S L G Q+H ++L+ G E
Sbjct: 295 TGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFE 354
Query: 325 WDLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAH---SKDHEALIYFEQM 381
L +L+ +Y+K G L A FD + ++DV W S+I + S + EALI + +M
Sbjct: 355 RHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRM 414
Query: 382 ERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVNLYGRAGL 441
+ G++P+ T S+L AC+ L ++++G+++ + K+G V + + +Y + G
Sbjct: 415 KTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTI-KHGFGLEVPIGSALSTMYSKCGS 473
Query: 442 IDEAYSMIVEKMEFEASP----VVWGALLYACYLHGNVCMGETAAQKLFE------LEPD 491
+++ + F +P V W A++ +G G+ A + LFE +EPD
Sbjct: 474 LEDG------NLVFRRTPNKDVVSWNAMISGLSHNGQ---GDEALE-LFEEMLAEGMEPD 523
Query: 492 N 492
+
Sbjct: 524 D 524
Score = 139 bits (350), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 173/325 (53%), Gaps = 14/325 (4%)
Query: 132 LLRLYATFGLIDEAHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDA---IALYFQMEEE 188
L+ YA G + +AH +F+ + + + WNSLI+GY++ G + + L+ +M +
Sbjct: 55 LVNFYAKCGKLAKAHSIFNAIICKDVVS--WNSLITGYSQNGGISSSYTVMQLFREMRAQ 112
Query: 189 GVEPDQFTFPRVLKACAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKA 248
+ P+ +T + KA + L VG + H V+ D +V +LV MY K G +
Sbjct: 113 DILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDG 172
Query: 249 RTVFDRIGNKDLISYNSMLTGYIHHGLLVEAFDIFRGMIL---NGFDPDPV--AISSILA 303
VF + ++ ++++M++GY G + EA +F + G D D V A+ S LA
Sbjct: 173 LKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLA 232
Query: 304 NASLLRIGAQVHGWVLRRGVEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNS 363
+ +G Q+H ++ G+ + ++N+L+ +YSK L++AC +FD ++ ++W++
Sbjct: 233 ATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSA 292
Query: 364 IIHAHSKDHEAL---IYFEQMERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKY 420
++ +S++ E+L F +M G+ P T V +L+AC+ + ++ G++L S ++ K
Sbjct: 293 MVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLL-KL 351
Query: 421 GISPRVEHYACMVNLYGRAGLIDEA 445
G + +V++Y +AG + +A
Sbjct: 352 GFERHLFATTALVDMYAKAGCLADA 376
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 122/221 (55%), Gaps = 2/221 (0%)
Query: 86 GITVQTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLIDEA 145
GI T +L C + +E G +LH + ++ ++ L+ +YA G + +A
Sbjct: 317 GIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADA 376
Query: 146 HQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKACA 205
+ FD + R W SLISGY + + E+A+ LY +M+ G+ P+ T VLKAC+
Sbjct: 377 RKGFDCLQERDVAL--WTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACS 434
Query: 206 GLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISYNS 265
L + +G++VH ++ GFG + + +AL MY+KCG + VF R NKD++S+N+
Sbjct: 435 SLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNA 494
Query: 266 MLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSILANAS 306
M++G H+G EA ++F M+ G +PD V +I++ S
Sbjct: 495 MISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACS 535
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 134/266 (50%), Gaps = 16/266 (6%)
Query: 213 GEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISYNSMLTGYIH 272
G VH +R G N LV+ YAKCG + KA ++F+ I KD++S+NS++TGY
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 273 HGLLVEAFDI---FRGMILNGFDPDPVAISSILANASLLR---IGAQVHGWVLRRGVEWD 326
+G + ++ + FR M P+ ++ I S L+ +G Q H V++ D
Sbjct: 93 NGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGD 152
Query: 327 LCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAHS---KDHEALIYFEQMER 383
+ + SL+ +Y K G ++ +F +MP+++ +W++++ ++ + EA+ F R
Sbjct: 153 IYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLR 212
Query: 384 ---DGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVNLYGRAG 440
+G D++ F ++LS+ A V +G ++ + + K G+ V +V +Y +
Sbjct: 213 EKEEGSDSDYV-FTAVLSSLAATIYVGLGRQIHCITI-KNGLLGFVALSNALVTMYSKCE 270
Query: 441 LIDEAYSMIVEKMEFEASPVVWGALL 466
++EA M + + + W A++
Sbjct: 271 SLNEACKMF--DSSGDRNSITWSAMV 294
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 254 bits (650), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 142/431 (32%), Positives = 245/431 (56%), Gaps = 9/431 (2%)
Query: 97 LLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLIDEAHQVFDQMSNRT 156
+L+ C + AV H I L + + + L+ Y+ G ++ A QVFD M R+
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 157 AFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKACAGLGLIRVGEKV 216
+ WN++I Y +A+ ++ +M EG + +FT VL AC +K+
Sbjct: 127 LVS--WNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKL 184
Query: 217 HLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISYNSMLTGYIHHGLL 276
H +V+ + +V AL+D+YAKCG I A VF+ + +K ++++SM+ GY+ +
Sbjct: 185 HCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNY 244
Query: 277 VEAFDIFRGMILNGFDPDPVAISSIL---ANASLLRIGAQVHGWVLRRGVEWDLCIANSL 333
EA ++R + + +SS++ +N + L G Q+H + + G ++ +A+S
Sbjct: 245 EEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSA 304
Query: 334 IVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHA---HSKDHEALIYFEQMERDGVLPDH 390
+ +Y+K G L ++ +F + +K++ WN+II H++ E +I FE+M++DG+ P+
Sbjct: 305 VDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNE 364
Query: 391 LTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVNLYGRAGLIDEAYSMIV 450
+TF SLLS C H G V+ G R F +M YG+SP V HY+CMV++ GRAGL+ EAY +I
Sbjct: 365 VTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELI- 423
Query: 451 EKMEFEASPVVWGALLYACYLHGNVCMGETAAQKLFELEPDNEHNFELLIKIYGNAGRLD 510
+ + F+ + +WG+LL +C ++ N+ + E AA+KLFELEP+N N LL IY + +
Sbjct: 424 KSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWE 483
Query: 511 DVERVERMLVD 521
++ + ++L D
Sbjct: 484 EIAKSRKLLRD 494
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 121/212 (57%), Gaps = 4/212 (1%)
Query: 93 TFASLLETC-YQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLIDEAHQVFDQ 151
T +S+L C A+E KLH L + N + + LL LYA G+I +A QVF+
Sbjct: 164 TISSVLSACGVNCDALECK-KLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFES 222
Query: 152 MSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKACAGLGLIR 211
M ++++ W+S+++GY + YE+A+ LY + + +E +QFT V+ AC+ L +
Sbjct: 223 MQDKSSVT--WSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALI 280
Query: 212 VGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISYNSMLTGYI 271
G+++H + GFG + FV ++ VDMYAKCG + ++ +F + K+L +N++++G+
Sbjct: 281 EGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFA 340
Query: 272 HHGLLVEAFDIFRGMILNGFDPDPVAISSILA 303
H E +F M +G P+ V SS+L+
Sbjct: 341 KHARPKEVMILFEKMQQDGMHPNEVTFSSLLS 372
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 254 bits (648), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 152/479 (31%), Positives = 260/479 (54%), Gaps = 49/479 (10%)
Query: 87 ITVQTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLIDEAH 146
IT + S+ C ++ H R + +L K++ + ++ Y G D
Sbjct: 183 ITSVSNALVSVYSKCASSPSLLHSA---RKVFDEILEKDERSWTTMMTGYVKNGYFDLGE 239
Query: 147 QVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKACAG 206
++ + M + +N++ISGY G Y++A+ + +M G+E D+FT+P V++ACA
Sbjct: 240 ELLEGMDDNMKLV-AYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACAT 298
Query: 207 LGLIRVGEKVHLDAVR---FGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISY 263
GL+++G++VH +R F F FD N+LV +Y KCG +AR +F+++ KDL+S+
Sbjct: 299 AGLLQLGKQVHAYVLRREDFSFHFD----NSLVSLYYKCGKFDEARAIFEKMPAKDLVSW 354
Query: 264 NSMLTGYIHHGLLVEAFDIFRGM----ILN---------------------------GFD 292
N++L+GY+ G + EA IF+ M IL+ GF+
Sbjct: 355 NALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFE 414
Query: 293 PDPVAISSILANASLLRI---GAQVHGWVLRRGVEWDLCIANSLIVVYSKDGKLDQACWL 349
P A S + + ++L G Q H +L+ G + L N+LI +Y+K G +++A +
Sbjct: 415 PCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQV 474
Query: 350 FDHMPQKDVVSWNSIIHA---HSKDHEALIYFEQMERDGVLPDHLTFVSLLSACAHLGSV 406
F MP D VSWN++I A H EA+ +E+M + G+ PD +T +++L+AC+H G V
Sbjct: 475 FRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLV 534
Query: 407 KVGERLFSVMVEKYGISPRVEHYACMVNLYGRAGLIDEAYSMIVEKMEFEASPVVWGALL 466
G + F M Y I P +HYA +++L R+G +A S ++E + F+ + +W ALL
Sbjct: 535 DQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAES-VIESLPFKPTAEIWEALL 593
Query: 467 YACYLHGNVCMGETAAQKLFELEPDNEHNFELLIKIYGNAGRLDDVERVERMLVDRGLE 525
C +HGN+ +G AA KLF L P+++ + LL ++ G+ ++V RV +++ DRG++
Sbjct: 594 SGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVK 652
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/420 (29%), Positives = 192/420 (45%), Gaps = 92/420 (21%)
Query: 136 YATFGLIDEAHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQF 195
Y G I A VF++ +N++I+G++ + AI L+ +M+ EG +PD F
Sbjct: 90 YCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNF 149
Query: 196 TFPRVLKACAGLGLIRVGEK----VHLDAVRFGFGFDGFVLNALVDMYAKCGD----IVK 247
TF VL AGL L+ EK H A++ G G+ V NALV +Y+KC +
Sbjct: 150 TFASVL---AGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHS 206
Query: 248 ARTVFDRIGNKD--------------------------------LISYNSMLTGYIHHGL 275
AR VFD I KD L++YN+M++GY++ G
Sbjct: 207 ARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGF 266
Query: 276 LVEAFDIFRGMILNGFDPDPVAISSIL---ANASLLRIGAQVHGWVLRRGVEWDLCIANS 332
EA ++ R M+ +G + D S++ A A LL++G QVH +VLRR ++ NS
Sbjct: 267 YQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNS 325
Query: 333 LIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAH-SKDH------------------- 372
L+ +Y K GK D+A +F+ MP KD+VSWN+++ + S H
Sbjct: 326 LVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSW 385
Query: 373 --------------EALIYFEQMERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVE 418
E L F M+R+G P F + +CA LG+ G++ + ++
Sbjct: 386 MIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLL- 444
Query: 419 KYGISPRVEHYACMVNLYGRAGLIDEAYSMIVEKMEFEASP----VVWGALLYACYLHGN 474
K G + ++ +Y + G+++EA + F P V W AL+ A HG+
Sbjct: 445 KIGFDSSLSAGNALITMYAKCGVVEEA------RQVFRTMPCLDSVSWNALIAALGQHGH 498
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 158/373 (42%), Gaps = 85/373 (22%)
Query: 210 IRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKC--------------------------- 242
+++ VH + + FGF +LN L+D+Y K
Sbjct: 30 LQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSG 89
Query: 243 ----GDIVKARTVFDR--IGNKDLISYNSMLTGYIHHGLLVEAFDIFRGMILNGFDPDPV 296
GDI AR VF++ + +D + YN+M+TG+ H+ A ++F M GF PD
Sbjct: 90 YCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNF 149
Query: 297 AISSILANASLL----RIGAQVHGWVLRRGVEWDLCIANSLIVVYSKDGK----LDQACW 348
+S+LA +L+ + Q H L+ G + ++N+L+ VYSK L A
Sbjct: 150 TFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARK 209
Query: 349 LFDHMPQKDVVSWNSIIHAHSKD-----------------------------------HE 373
+FD + +KD SW +++ + K+ E
Sbjct: 210 VFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQE 269
Query: 374 ALIYFEQMERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACMV 433
AL +M G+ D T+ S++ ACA G +++G+++ + ++ + S ++ +V
Sbjct: 270 ALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDN--SLV 327
Query: 434 NLYGRAGLIDEAYSMIVEKMEFEASPVVWGALLYACYLHGNVCMGETAAQKLFELEPDNE 493
+LY + G DEA + I EKM + V W AL L G V G KL E +
Sbjct: 328 SLYYKCGKFDEARA-IFEKMPAK-DLVSWNAL-----LSGYVSSGHIGEAKLIFKEMKEK 380
Query: 494 HNFELLIKIYGNA 506
+ +I I G A
Sbjct: 381 NILSWMIMISGLA 393
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 253 bits (646), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 143/426 (33%), Positives = 244/426 (57%), Gaps = 10/426 (2%)
Query: 94 FASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLIDEAHQVFDQMS 153
F S L+ C L ++G ++H L + L N L +YA G ++ A +VFDQ+
Sbjct: 273 FGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIE 332
Query: 154 NRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKACAGLGLIRVG 213
+ WN +I+G A G ++A++++ QM G PD + +L A + G
Sbjct: 333 RPDTAS--WNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQG 390
Query: 214 EKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVF-DRIGNKDLISYNSMLTGYIH 272
++H +++GF D V N+L+ MY C D+ +F D N D +S+N++LT +
Sbjct: 391 MQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQ 450
Query: 273 HGLLVEAFDIFRGMILNGFDPDPVAISSILANA---SLLRIGAQVHGWVLRRGVEWDLCI 329
H VE +F+ M+++ +PD + + ++L S L++G+QVH + L+ G+ + I
Sbjct: 451 HEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFI 510
Query: 330 ANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAHSKD---HEALIYFEQMERDGV 386
N LI +Y+K G L QA +FD M +DVVSW+++I +++ EALI F++M+ G+
Sbjct: 511 KNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGI 570
Query: 387 LPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVNLYGRAGLIDEAY 446
P+H+TFV +L+AC+H+G V+ G +L++ M ++GISP EH +C+V+L RAG ++EA
Sbjct: 571 EPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAE 630
Query: 447 SMIVEKMEFEASPVVWGALLYACYLHGNVCMGETAAQKLFELEPDNEHNFELLIKIYGNA 506
I ++M+ E VVW LL AC GNV + + AA+ + +++P N LL ++ ++
Sbjct: 631 RFI-DEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASS 689
Query: 507 GRLDDV 512
G ++
Sbjct: 690 GNWENA 695
Score = 166 bits (421), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 123/449 (27%), Positives = 220/449 (48%), Gaps = 24/449 (5%)
Query: 38 ISRNRITTFSSYPKSSPTPLLTN-------QKAFPKTKLQALDSIIQDLESSVQNGITVQ 90
+S ++I SS + T L N + F + L+A D ++ + ++
Sbjct: 13 VSNSQILATSSVVSTIKTEELMNDHINSLCKSNFYREALEAFDFAQKN------SSFKIR 66
Query: 91 TETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLIDEAHQVFD 150
T+ SL+ C +++ G K+H I + + + +++ +L +Y G + +A +VFD
Sbjct: 67 LRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFD 126
Query: 151 QMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKACAGLGLI 210
M R ++ S+I+GY++ G+ +AI LY +M +E + PDQF F ++KACA +
Sbjct: 127 FMPERNLVSY--TSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDV 184
Query: 211 RVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISYNSMLTGY 270
+G+++H ++ NAL+ MY + + A VF I KDLIS++S++ G+
Sbjct: 185 GLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGF 244
Query: 271 IHHGLLVEAFDIFRGMILNG-FDPDPVAI-SSILANASLLR--IGAQVHGWVLRRGVEWD 326
G EA + M+ G F P+ SS+ A +SLLR G+Q+HG ++ + +
Sbjct: 245 SQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGN 304
Query: 327 LCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAHSKD---HEALIYFEQMER 383
SL +Y++ G L+ A +FD + + D SWN II + + EA+ F QM
Sbjct: 305 AIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRS 364
Query: 384 DGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVNLYGRAGLID 443
G +PD ++ SLL A ++ G ++ S ++ K+G + ++ +Y +
Sbjct: 365 SGFIPDAISLRSLLCAQTKPMALSQGMQIHSYII-KWGFLADLTVCNSLLTMYTFCSDLY 423
Query: 444 EAYSMIVEKMEFEASPVVWGALLYACYLH 472
+++ E A V W +L AC H
Sbjct: 424 CCFNLF-EDFRNNADSVSWNTILTACLQH 451
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 253 bits (646), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 144/439 (32%), Positives = 241/439 (54%), Gaps = 9/439 (2%)
Query: 93 TFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLIDEAHQVFDQM 152
T+ S+L+TC +L +E G ++H I + N + S L+ +YA G +D A + +
Sbjct: 492 TYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRF 551
Query: 153 SNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKACAGLGLIRV 212
+ + + W ++I+GY + + A+ + QM + G+ D+ + ACAGL ++
Sbjct: 552 AGKDVVS--WTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKE 609
Query: 213 GEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISYNSMLTGYIH 272
G+++H A GF D NALV +Y++CG I ++ F++ D I++N++++G+
Sbjct: 610 GQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQ 669
Query: 273 HGLLVEAFDIFRGMILNGFDPDPVAISSILANASL---LRIGAQVHGWVLRRGVEWDLCI 329
G EA +F M G D + S + AS ++ G QVH + + G + + +
Sbjct: 670 SGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEV 729
Query: 330 ANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAHSK---DHEALIYFEQMERDGV 386
N+LI +Y+K G + A F + K+ VSWN+II+A+SK EAL F+QM V
Sbjct: 730 CNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNV 789
Query: 387 LPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVNLYGRAGLIDEAY 446
P+H+T V +LSAC+H+G V G F M +YG+SP+ EHY C+V++ RAGL+ A
Sbjct: 790 RPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAK 849
Query: 447 SMIVEKMEFEASPVVWGALLYACYLHGNVCMGETAAQKLFELEPDNEHNFELLIKIYGNA 506
I E M + +VW LL AC +H N+ +GE AA L ELEP++ + LL +Y +
Sbjct: 850 EFIQE-MPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVS 908
Query: 507 GRLDDVERVERMLVDRGLE 525
+ D + + + ++G++
Sbjct: 909 KKWDARDLTRQKMKEKGVK 927
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 195/398 (48%), Gaps = 17/398 (4%)
Query: 85 NGITVQTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLIDE 144
+G+ + T ASL+ C + G +LH N I LL LYA I+
Sbjct: 383 DGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIET 442
Query: 145 AHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKAC 204
A F + WN ++ Y L + ++ ++ QM+ E + P+Q+T+P +LK C
Sbjct: 443 ALDYF--LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTC 500
Query: 205 AGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISYN 264
LG + +GE++H ++ F + +V + L+DMYAK G + A + R KD++S+
Sbjct: 501 IRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWT 560
Query: 265 SMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAIS---SILANASLLRIGAQVHGWVLRR 321
+M+ GY + +A FR M+ G D V ++ S A L+ G Q+H
Sbjct: 561 TMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS 620
Query: 322 GVEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAHSK---DHEALIYF 378
G DL N+L+ +YS+ GK++++ F+ D ++WN+++ + + EAL F
Sbjct: 621 GFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVF 680
Query: 379 EQMERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVNLYGR 438
+M R+G+ ++ TF S + A + ++K G+++ +V + K G E ++++Y +
Sbjct: 681 VRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAV-ITKTGYDSETEVCNALISMYAK 739
Query: 439 AGLIDEAYSMIVEKMEFEASP---VVWGALLYACYLHG 473
G I +A EK E S V W A++ A HG
Sbjct: 740 CGSISDA-----EKQFLEVSTKNEVSWNAIINAYSKHG 772
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 130/396 (32%), Positives = 203/396 (51%), Gaps = 14/396 (3%)
Query: 82 SVQN-GITVQTETFASLLETCYQLK-AVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATF 139
SV+N GI +T LLE C + +++ G KLH I L N +S KL Y
Sbjct: 74 SVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFK 133
Query: 140 GLIDEAHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPR 199
G + A +VFD+M RT F WN +I A + L+ +M E V P++ TF
Sbjct: 134 GDLYGAFKVFDEMPERTIFT--WNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSG 191
Query: 200 VLKACAGLGL-IRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNK 258
VL+AC G + V E++H + G V N L+D+Y++ G + AR VFD + K
Sbjct: 192 VLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK 251
Query: 259 DLISYNSMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSILANASL---LRIGAQVH 315
D S+ +M++G + EA +F M + G P P A SS+L+ L IG Q+H
Sbjct: 252 DHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLH 311
Query: 316 GWVLRRGVEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAHSK---DH 372
G VL+ G D + N+L+ +Y G L A +F +M Q+D V++N++I+ S+
Sbjct: 312 GLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGE 371
Query: 373 EALIYFEQMERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACM 432
+A+ F++M DG+ PD T SL+ AC+ G++ G++L + K G + + +
Sbjct: 372 KAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTT-KLGFASNNKIEGAL 430
Query: 433 VNLYGRAGLIDEAYSMIVEKMEFEASPVVWGALLYA 468
+NLY + I+ A +E E E + V+W +L A
Sbjct: 431 LNLYAKCADIETALDYFLE-TEVE-NVVLWNVMLVA 464
Score = 166 bits (420), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 207/405 (51%), Gaps = 25/405 (6%)
Query: 83 VQNGITVQTETFASLLETC----YQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYAT 138
V +T TF+ +LE C VE ++H I LR + + + L+ LY+
Sbjct: 178 VSENVTPNEGTFSGVLEACRGGSVAFDVVE---QIHARILYQGLRDSTVVCNPLIDLYSR 234
Query: 139 FGLIDEAHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFP 198
G +D A +VFD + R W ++ISG ++ +AI L+ M G+ P + F
Sbjct: 235 NGFVDLARRVFDGL--RLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFS 292
Query: 199 RVLKACAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNK 258
VL AC + + +GE++H ++ GF D +V NALV +Y G+++ A +F + +
Sbjct: 293 SVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR 352
Query: 259 DLISYNSMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSIL----ANASLLRIGAQV 314
D ++YN+++ G G +A ++F+ M L+G +PD ++S++ A+ +L R G Q+
Sbjct: 353 DAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFR-GQQL 411
Query: 315 HGWVLRRGVEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAHS---KD 371
H + + G + I +L+ +Y+K ++ A F ++VV WN ++ A+
Sbjct: 412 HAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDL 471
Query: 372 HEALIYFEQMERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYAC 431
+ F QM+ + ++P+ T+ S+L C LG +++GE++ S +++ + ++ Y C
Sbjct: 472 RNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIK---TNFQLNAYVC 528
Query: 432 --MVNLYGRAGLIDEAYSMIVEKMEFEASPVVWGALLYACYLHGN 474
++++Y + G +D A+ +++ F VV + A Y N
Sbjct: 529 SVLIDMYAKLGKLDTAWDILI---RFAGKDVVSWTTMIAGYTQYN 570
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 159/338 (47%), Gaps = 29/338 (8%)
Query: 73 DSIIQDLESSVQNGITVQTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKL 132
D + + GI + + C L+A++ G ++H + + + L
Sbjct: 573 DKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNAL 632
Query: 133 LRLYATFGLIDEAHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEP 192
+ LY+ G I+E++ F+Q A WN+L+SG+ + G E+A+ ++ +M EG++
Sbjct: 633 VTLYSRCGKIEESYLAFEQTEAGDNIA--WNALVSGFQQSGNNEEALRVFVRMNREGIDN 690
Query: 193 DQFTFPRVLKACAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVF 252
+ FTF +KA + ++ G++VH + G+ + V NAL+ MYAKCG I A F
Sbjct: 691 NNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQF 750
Query: 253 DRIGNKDLISYNSMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSILANASLLRIGA 312
+ K+ +S+N+++ Y HG EA D F MI + P+ V + +L+ S
Sbjct: 751 LEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACS------ 804
Query: 313 QVHGWVLRRGVEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAHSKDH 372
H ++ +G+ + S+ Y K + + D + + ++S
Sbjct: 805 --HIGLVDKGIAY----FESMNSEYGLSPKPEHYVCVVDMLTRAGLLS------------ 846
Query: 373 EALIYFEQMERDGVLPDHLTFVSLLSACAHLGSVKVGE 410
A + ++M + PD L + +LLSAC ++++GE
Sbjct: 847 RAKEFIQEMP---IKPDALVWRTLLSACVVHKNMEIGE 881
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 147/313 (46%), Gaps = 24/313 (7%)
Query: 146 HQVFDQMSNRTAFAFPWNSLISGYAELGEY--EDAIALYFQ------MEEEGVEPDQFTF 197
H V ++ RT F + + +A + Y ED FQ +E G+ P+ T
Sbjct: 31 HGVPRKLKTRTVFPTLCGTRRASFAAISVYISEDE---SFQEKRIDSVENRGIRPNHQTL 87
Query: 198 PRVLKACAGL-GLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIG 256
+L+ C G + G K+H ++ G +G + L D Y GD+ A VFD +
Sbjct: 88 KWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMP 147
Query: 257 NKDLISYNSMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSIL----ANASLLRIGA 312
+ + ++N M+ L+ E F +F M+ P+ S +L + +
Sbjct: 148 ERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVE 207
Query: 313 QVHGWVLRRGVEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAHSKDH 372
Q+H +L +G+ + N LI +YS++G +D A +FD + KD SW ++I SK+
Sbjct: 208 QIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNE 267
Query: 373 ---EALIYFEQMERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHY 429
EA+ F M G++P F S+LSAC + S+++GE+L +V K G S + Y
Sbjct: 268 CEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHG-LVLKLGFSS--DTY 324
Query: 430 AC--MVNLYGRAG 440
C +V+LY G
Sbjct: 325 VCNALVSLYFHLG 337
>sp|Q9STS9|PP268_ARATH Putative pentatricopeptide repeat-containing protein At3g47840
OS=Arabidopsis thaliana GN=PCMP-E43 PE=3 SV=1
Length = 706
Score = 253 bits (645), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 141/440 (32%), Positives = 235/440 (53%), Gaps = 9/440 (2%)
Query: 91 TETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLIDEAHQVFD 150
T TFA L+ C L+ V++G +H + +++ L +Y G + + +F+
Sbjct: 209 TYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFE 268
Query: 151 QMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKACAGLGLI 210
MS R + W SLI Y +G+ A+ + +M V P++ TF + ACA L +
Sbjct: 269 NMSERDVVS--WTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRL 326
Query: 211 RVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISYNSMLTGY 270
GE++H + + G V N+++ MY+ CG++V A +F + +D+IS+++++ GY
Sbjct: 327 VWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGY 386
Query: 271 IHHGLLVEAFDIFRGMILNGFDPDPVAISSILA---NASLLRIGAQVHGWVLRRGVEWDL 327
G E F F M +G P A++S+L+ N +++ G QVH L G+E +
Sbjct: 387 CQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNS 446
Query: 328 CIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHA---HSKDHEALIYFEQMERD 384
+ +SLI +YSK G + +A +F + D+VS ++I+ H K EA+ FE+ +
Sbjct: 447 TVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKV 506
Query: 385 GVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVNLYGRAGLIDE 444
G PD +TF+S+L+AC H G + +G F++M E Y + P EHY CMV+L RAG + +
Sbjct: 507 GFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSD 566
Query: 445 AYSMIVEKMEFEASPVVWGALLYACYLHGNVCMGETAAQKLFELEPDNEHNFELLIKIYG 504
A MI E M ++ VVW LL AC G++ G AA+++ EL+P L IY
Sbjct: 567 AEKMINE-MSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYS 625
Query: 505 NAGRLDDVERVERMLVDRGL 524
+ G L++ V + + +G+
Sbjct: 626 STGNLEEAANVRKNMKAKGV 645
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/475 (26%), Positives = 220/475 (46%), Gaps = 46/475 (9%)
Query: 83 VQNGITVQTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLI 142
V + ++ T + +L+ C Q + +G LH L + + S LL +Y G I
Sbjct: 100 VDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKI 159
Query: 143 DEAHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLK 202
D++ +VF +M R A W ++I+G G Y++ + + +M D +TF LK
Sbjct: 160 DKSCRVFSEMPFRNAVT--WTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALK 217
Query: 203 ACAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLIS 262
ACAGL ++ G+ +H + GF V N+L MY +CG++ +F+ + +D++S
Sbjct: 218 ACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVS 277
Query: 263 YNSMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSIL-ANASLLRI--GAQVHGWVL 319
+ S++ Y G V+A + F M + P+ +S+ A ASL R+ G Q+H VL
Sbjct: 278 WTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVL 337
Query: 320 RRGVEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAHSK---DHEALI 376
G+ L ++NS++ +YS G L A LF M +D++SW++II + + E
Sbjct: 338 SLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFK 397
Query: 377 YFEQMERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVNLY 436
YF M + G P SLLS ++ ++ G ++ ++ + +G+ + ++N+Y
Sbjct: 398 YFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALAL-CFGLEQNSTVRSSLINMY 456
Query: 437 GRAGLIDEAYSMIVE---------------------------------KMEFEASPVVWG 463
+ G I EA + E K+ F V +
Sbjct: 457 SKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFI 516
Query: 464 ALLYACYLHGNVCMG---ETAAQKLFELEPDNEHNFELLIKIYGNAGRLDDVERV 515
++L AC G + +G Q+ + + P EH + ++ + AGRL D E++
Sbjct: 517 SVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEH-YGCMVDLLCRAGRLSDAEKM 570
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 133/278 (47%), Gaps = 16/278 (5%)
Query: 243 GDIVKARTVFDRIGNKDLISYNSMLTGYIHHGLLVEAFDIFRGM--ILNGFDPDPVAISS 300
G++ AR VFD++ + D++S+ S++ Y+ EA +F M + + PD +S
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 301 IL---ANASLLRIGAQVHGWVLRRGVEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQKD 357
+L +S + G +H + ++ + + + +SL+ +Y + GK+D++C +F MP ++
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRN 173
Query: 358 VVSWNSII----HAHSKDHEALIYFEQMERDGVLPDHLTFVSLLSACAHLGSVKVGERLF 413
V+W +II HA + E L YF +M R L D TF L ACA L VK G+ +
Sbjct: 174 AVTWTAIITGLVHA-GRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIH 232
Query: 414 S-VMVEKYGISPRVEHYACMVNLYGRAGLIDEAYSMIVEKMEFEASPVVWGALLYACYLH 472
+ V+V + + V + + +Y G + + + E M E V W +L+ A
Sbjct: 233 THVIVRGFVTTLCVANS--LATMYTECGEMQDGLCLF-ENMS-ERDVVSWTSLIVAYKRI 288
Query: 473 GN-VCMGETAAQKLFELEPDNEHNFELLIKIYGNAGRL 509
G V ET + P NE F + + RL
Sbjct: 289 GQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRL 326
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 122/296 (41%), Gaps = 60/296 (20%)
Query: 84 QNGITVQTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLID 143
Q+G ASLL + +E G ++H L L +N + S L+ +Y+ G I
Sbjct: 404 QSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIK 463
Query: 144 EAHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKA 203
EA +F + + ++I+GYAE G+ ++AI L+ + + G PD TF VL A
Sbjct: 464 EASMIFGETDRDDIVSL--TAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTA 521
Query: 204 CAGLGLIRVG--------EKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRI 255
C G + +G E ++ + +G +VD+ + G + A + + +
Sbjct: 522 CTHSGQLDLGFHYFNMMQETYNMRPAKEHYG-------CMVDLLCRAGRLSDAEKMINEM 574
Query: 256 G-NKDLISYNSMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSILANASLLRIGAQV 314
KD + + ++L G DI RG R A+
Sbjct: 575 SWKKDDVVWTTLLIACKAKG------DIERG-----------------------RRAAE- 604
Query: 315 HGWVLRRGVEWDLCIANSLIV---VYSKDGKLDQACWLFDHMPQKDVV---SWNSI 364
R +E D A +L+ +YS G L++A + +M K V+ W+SI
Sbjct: 605 ------RILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSI 654
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 251 bits (642), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 156/477 (32%), Positives = 257/477 (53%), Gaps = 27/477 (5%)
Query: 61 QKAFPKTKLQA-LDSIIQDLESSVQNGITVQTETFASLLETCYQLKAVEHGIKLHR-LIP 118
Q FP+ ++ LD ++ ES T +S+ C +L+ + G +LH I
Sbjct: 246 QMGFPREAIRFFLDMVLSGFES--------DKFTLSSVFSACAELENLSLGKQLHSWAIR 297
Query: 119 TNLLRKNKGISSKLLRLYATF---GLIDEAHQVFDQMSNRTAFAFPWNSLISGYAE-LGE 174
+ L+ + L+ +YA G +D+ +VFD+M + + + W +LI+GY +
Sbjct: 298 SGLV---DDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMS--WTALITGYMKNCNL 352
Query: 175 YEDAIALYFQMEEEG-VEPDQFTFPRVLKACAGLGLIRVGEKVHLDAVRFGFGFDGFVLN 233
+AI L+ +M +G VEP+ FTF KAC L RVG++V A + G + V N
Sbjct: 353 ATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVAN 412
Query: 234 ALVDMYAKCGDIVKARTVFDRIGNKDLISYNSMLTGYIHHGLLVEAFDIFRGMILNGFDP 293
+++ M+ K + A+ F+ + K+L+SYN+ L G + +AF + +
Sbjct: 413 SVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGV 472
Query: 294 DPVAISSIL---ANASLLRIGAQVHGWVLRRGVEWDLCIANSLIVVYSKDGKLDQACWLF 350
+S+L AN +R G Q+H V++ G+ + + N+LI +YSK G +D A +F
Sbjct: 473 SAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVF 532
Query: 351 DHMPQKDVVSWNSIIHAHSKDHEA---LIYFEQMERDGVLPDHLTFVSLLSACAHLGSVK 407
+ M ++V+SW S+I +K A L F QM +GV P+ +T+V++LSAC+H+G V
Sbjct: 533 NFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVS 592
Query: 408 VGERLFSVMVEKYGISPRVEHYACMVNLYGRAGLIDEAYSMIVEKMEFEASPVVWGALLY 467
G R F+ M E + I P++EHYACMV+L RAGL+ +A+ I M F+A +VW L
Sbjct: 593 EGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFI-NTMPFQADVLVWRTFLG 651
Query: 468 ACYLHGNVCMGETAAQKLFELEPDNEHNFELLIKIYGNAGRLDDVERVERMLVDRGL 524
AC +H N +G+ AA+K+ EL+P+ + L IY AG+ ++ + R + +R L
Sbjct: 652 ACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNL 708
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 138/541 (25%), Positives = 247/541 (45%), Gaps = 71/541 (13%)
Query: 48 SYPKSSPTPLLTNQKAFPKTKLQALDSII------QDLESSV-------QNGIT-VQTET 93
S+P SP L + ++ D +I DL +V ++GI + + T
Sbjct: 7 SFP--SPAKLPIKSQPSVSNRINVADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVT 64
Query: 94 FASLLETCYQLKAVEHGIKLH-RLIPTNLLRKNKGISSKLLRLYATFGLIDEAHQVFDQM 152
F+SLL++C + + G +H RLI + + + + + L+ LY+ G +A VF+ M
Sbjct: 65 FSSLLKSCIRARDFRLGKLVHARLIEFD-IEPDSVLYNSLISLYSKSGDSAKAEDVFETM 123
Query: 153 ---SNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKACAGLGL 209
R + W+++++ Y G DAI ++ + E G+ P+ + + V++AC+
Sbjct: 124 RRFGKRDVVS--WSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDF 181
Query: 210 IRVGEKVHLDAVRFG-FGFDGFVLNALVDMYAKC-GDIVKARTVFDRIGNKDLISYNSML 267
+ VG ++ G F D V +L+DM+ K A VFD++ +++++ M+
Sbjct: 182 VGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMI 241
Query: 268 TGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSIL-ANASL--LRIGAQVHGWVLRRGVE 324
T + G EA F M+L+GF+ D +SS+ A A L L +G Q+H W +R G+
Sbjct: 242 TRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLV 301
Query: 325 WDLCIANSLIVVYSK---DGKLDQACWLFDHMPQKDVVSWNSIIHAHSKD----HEALIY 377
D + SL+ +Y+K DG +D +FD M V+SW ++I + K+ EA+
Sbjct: 302 DD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINL 359
Query: 378 FEQMERDG-VLPDHLTFVSLLSACAHLGSVKVGERLF---------------SVMVEKYG 421
F +M G V P+H TF S AC +L +VG+++ + ++ +
Sbjct: 360 FSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFV 419
Query: 422 ISPRVE---------------HYACMVNLYGRAGLIDEAYSMIVEKMEFE--ASPVVWGA 464
S R+E Y ++ R ++A+ ++ E E E S + +
Sbjct: 420 KSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFAS 479
Query: 465 LLYACYLHGNVCMGETAAQKLFELEPD-NEHNFELLIKIYGNAGRLDDVERVERMLVDRG 523
LL G++ GE ++ +L N+ LI +Y G +D RV + +R
Sbjct: 480 LLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRN 539
Query: 524 L 524
+
Sbjct: 540 V 540
>sp|Q0WQW5|PPR85_ARATH Pentatricopeptide repeat-containing protein At1g59720,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H51 PE=2
SV=2
Length = 638
Score = 251 bits (642), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 160/452 (35%), Positives = 246/452 (54%), Gaps = 29/452 (6%)
Query: 96 SLLETCYQLKAVE--HGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLIDEAHQVFDQMS 153
SL ETC + ++ H L P + K+L+L ++F ++ A +VFD +
Sbjct: 53 SLAETCSDMSQLKQLHAFTLRTTYPEE--PATLFLYGKILQLSSSFSDVNYAFRVFDSIE 110
Query: 154 NRTAFAFPWNSLISGYA-ELGEYEDAIALYFQMEEEG-VEPDQFTFPRVLKACAGLGLIR 211
N ++F WN+LI A ++ E+A LY +M E G PD+ TFP VLKACA +
Sbjct: 111 NHSSFM--WNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFS 168
Query: 212 VGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISYNSMLTGYI 271
G++VH V+ GFG D +V N L+ +Y CG + AR VFD + + L+S+NSM+ +
Sbjct: 169 EGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALV 228
Query: 272 HHGLLVEAFDIFRGMILNGFDPDPVAISSIL---ANASLLRIGAQVHGWVLRR---GVEW 325
G A +FR M F+PD + S+L A L +G H ++LR+ V
Sbjct: 229 RFGEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAM 287
Query: 326 DLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSII---HAHSKDHEALIYFEQM- 381
D+ + NSLI +Y K G L A +F M ++D+ SWN++I H + EA+ +F++M
Sbjct: 288 DVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMV 347
Query: 382 -ERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVNLYGRAG 440
+R+ V P+ +TFV LL AC H G V G + F +MV Y I P +EHY C+V+L RAG
Sbjct: 348 DKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAG 407
Query: 441 LIDEAYSMIVEKMEFEASPVVWGALLYACYLHG-NVCMGETAAQKLFELEPDNEHN---- 495
I EA M++ M + V+W +LL AC G +V + E A+ + + DNE +
Sbjct: 408 YITEAIDMVM-SMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNC 466
Query: 496 ---FELLIKIYGNAGRLDDVERVERMLVDRGL 524
+ LL ++Y +A R +DV V +++ + G+
Sbjct: 467 SGAYVLLSRVYASASRWNDVGIVRKLMSEHGI 498
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 149/307 (48%), Gaps = 23/307 (7%)
Query: 93 TFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLIDEAHQVFDQM 152
TF +L+ C + G ++H I + + +++ L+ LY + G +D A +VFD+M
Sbjct: 153 TFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEM 212
Query: 153 SNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKACAGLGLIRV 212
R+ + WNS+I GEY+ A+ L+ +M + EPD +T VL ACAGLG + +
Sbjct: 213 PERSLVS--WNSMIDALVRFGEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSL 269
Query: 213 GEKVH---LDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISYNSMLTG 269
G H L D V N+L++MY KCG + A VF + +DL S+N+M+ G
Sbjct: 270 GTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILG 329
Query: 270 YIHHGLLVEAFDIFRGMI--LNGFDPDPVAISSILANAS---LLRIGAQVHGWVLRRGVE 324
+ HG EA + F M+ P+ V +L + + G Q ++R
Sbjct: 330 FATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVR---- 385
Query: 325 WDLCIANSL------IVVYSKDGKLDQACWLFDHMPQK-DVVSWNSIIHAHSKDHEALIY 377
D CI +L + + ++ G + +A + MP K D V W S++ A K ++
Sbjct: 386 -DYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVEL 444
Query: 378 FEQMERD 384
E++ R+
Sbjct: 445 SEEIARN 451
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 251 bits (641), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 167/585 (28%), Positives = 281/585 (48%), Gaps = 86/585 (14%)
Query: 26 RSRKQRRQKQQQISRNRITTFSSYP---------KSSPTPLLTNQKA--FPKTKLQALDS 74
R K Q IS I ++S+Y +S P P + + + + TK +
Sbjct: 40 RILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQ 99
Query: 75 IIQDLESSVQNGITVQTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLR 134
I +G+ + +L + C +L A + G ++H + + L + + +
Sbjct: 100 SIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFH 159
Query: 135 LYATFGLIDEAHQVFDQMSNR---------TAFA------------------------FP 161
+Y G + +A +VFD+MS++ A+A
Sbjct: 160 MYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVS 219
Query: 162 WNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKACAGLGLIRVGEKVHLDAV 221
WN ++SG+ G +++A+ ++ ++ G PDQ T VL + ++ +G +H +
Sbjct: 220 WNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVI 279
Query: 222 RFGFGFDGFVLNALVDMYAKCGDIVKARTVFD------------------RIGNKD---- 259
+ G D V++A++DMY K G + ++F+ R G D
Sbjct: 280 KQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALE 339
Query: 260 -------------LISYNSMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSIL---A 303
++S+ S++ G +G +EA ++FR M + G P+ V I S+L
Sbjct: 340 MFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACG 399
Query: 304 NASLLRIGAQVHGWVLRRGVEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNS 363
N + L G HG+ +R + ++ + ++LI +Y+K G+++ + +F+ MP K++V WNS
Sbjct: 400 NIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNS 459
Query: 364 IIHA---HSKDHEALIYFEQMERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKY 420
+++ H K E + FE + R + PD ++F SLLSAC +G G + F +M E+Y
Sbjct: 460 LMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEY 519
Query: 421 GISPRVEHYACMVNLYGRAGLIDEAYSMIVEKMEFEASPVVWGALLYACYLHGNVCMGET 480
GI PR+EHY+CMVNL GRAG + EAY +I E M FE VWGALL +C L NV + E
Sbjct: 520 GIKPRLEHYSCMVNLLGRAGKLQEAYDLIKE-MPFEPDSCVWGALLNSCRLQNNVDLAEI 578
Query: 481 AAQKLFELEPDNEHNFELLIKIYGNAGRLDDVERVERMLVDRGLE 525
AA+KLF LEP+N + LL IY G +V+ + + GL+
Sbjct: 579 AAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLK 623
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 128/332 (38%), Gaps = 73/332 (21%)
Query: 215 KVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISYNSMLTGYIHHG 274
+ H ++ G DG++ L+ Y+ A V I + + S++S++
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 275 LLVEAFDIFRGMILNGFDPDPVAISS---ILANASLLRIGAQVHGWVLRRGVEWDLCIAN 331
L ++ +F M +G PD + + + A S ++G Q+H G++ D +
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 332 SLIVVYSKDGKLDQACWLFDHMPQKDV--------------------------------- 358
S+ +Y + G++ A +FD M KDV
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 359 --VSWNSIIHAHSKD---HEALIYFEQMERDGVLPDHLTFVSLLSACAHLGSVKVGERL- 412
VSWN I+ ++ EA++ F+++ G PD +T S+L + + +G +
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 413 --------------FSVMVEKYGISPRV-------------EHYACMVNLYG--RAGLID 443
S M++ YG S V E C + G R GL+D
Sbjct: 276 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVD 335
Query: 444 EAYSM--IVEKMEFEASPVVWGALLYACYLHG 473
+A M + ++ E + V W +++ C +G
Sbjct: 336 KALEMFELFKEQTMELNVVSWTSIIAGCAQNG 367
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 249 bits (637), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 154/469 (32%), Positives = 253/469 (53%), Gaps = 23/469 (4%)
Query: 76 IQDLESSVQNGITVQTETFASLLETCYQLKAVEHGIKLHRLIPTN-LLRKNKGISSKLLR 134
++ L V G+ T +S+L C L+ + G +LH N L +N + S L+
Sbjct: 287 LEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVD 346
Query: 135 LYATFGLIDEAHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEE-GVEPD 193
+Y + +VFD M +R WN++I+GY++ ++A+ L+ MEE G+ +
Sbjct: 347 MYCNCKQVLSGRRVFDGMFDRKIGL--WNAMIAGYSQNEHDKEALLLFIGMEESAGLLAN 404
Query: 194 QFTFPRVLKACAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFD 253
T V+ AC G E +H V+ G D FV N L+DMY++ G I A +F
Sbjct: 405 STTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFG 464
Query: 254 RIGNKDLISYNSMLTGYI---HHG---LLVEAFD-----IFRGMILNGFDPDPVAISSIL 302
++ ++DL+++N+M+TGY+ HH LL+ + +G P+ + + +IL
Sbjct: 465 KMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTIL 524
Query: 303 ---ANASLLRIGAQVHGWVLRRGVEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVV 359
A S L G ++H + ++ + D+ + ++L+ +Y+K G L + +FD +PQK+V+
Sbjct: 525 PSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVI 584
Query: 360 SWNSIIHA---HSKDHEALIYFEQMERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVM 416
+WN II A H EA+ M GV P+ +TF+S+ +AC+H G V G R+F VM
Sbjct: 585 TWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVM 644
Query: 417 VEKYGISPRVEHYACMVNLYGRAGLIDEAYSMI-VEKMEFEASPVVWGALLYACYLHGNV 475
YG+ P +HYAC+V+L GRAG I EAY ++ + +F + W +LL A +H N+
Sbjct: 645 KPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAG-AWSSLLGASRIHNNL 703
Query: 476 CMGETAAQKLFELEPDNEHNFELLIKIYGNAGRLDDVERVERMLVDRGL 524
+GE AAQ L +LEP+ ++ LL IY +AG D V R + ++G+
Sbjct: 704 EIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGV 752
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 115/397 (28%), Positives = 202/397 (50%), Gaps = 26/397 (6%)
Query: 86 GITVQTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISS-----KLLRLYATFG 140
GI F +LL+ L+ +E G ++H ++ + G+ S L+ LY G
Sbjct: 92 GIKPDNYAFPALLKAVADLQDMELGKQIH----AHVYKFGYGVDSVTVANTLVNLYRKCG 147
Query: 141 LIDEAHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRV 200
++VFD++S R + WNSLIS ++E A+ + M +E VEP FT V
Sbjct: 148 DFGAVYKVFDRISERNQVS--WNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSV 205
Query: 201 LKACAGLGL---IRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGN 257
+ AC+ L + + +G++VH +R G + F++N LV MY K G + ++ + G
Sbjct: 206 VTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGG 264
Query: 258 KDLISYNSMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSILANAS---LLRIGAQV 314
+DL+++N++L+ + L+EA + R M+L G +PD ISS+L S +LR G ++
Sbjct: 265 RDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKEL 324
Query: 315 HGWVLRRG-VEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAHSK--- 370
H + L+ G ++ + + ++L+ +Y ++ +FD M + + WN++I +S+
Sbjct: 325 HAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEH 384
Query: 371 DHEALIYFEQMERD-GVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHY 429
D EAL+ F ME G+L + T ++ AC G+ E + +V K G+
Sbjct: 385 DKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVV-KRGLDRDRFVQ 443
Query: 430 ACMVNLYGRAGLIDEAYSMIVEKMEFEASPVVWGALL 466
++++Y R G ID A I KME + V W ++
Sbjct: 444 NTLMDMYSRLGKIDIAMR-IFGKME-DRDLVTWNTMI 478
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 165/332 (49%), Gaps = 14/332 (4%)
Query: 118 PTNLLRKNKGISSKLLRLYATFGLIDEAHQVFDQMS---NRTAFAFPWNSLISGYAELGE 174
P+ LL ++ LLR T D A V S +++ W L+
Sbjct: 18 PSQLLPFSRHKHPYLLRATPTSATEDVASAVSGAPSIFISQSRSPEWWIDLLRSKVRSNL 77
Query: 175 YEDAIALYFQMEEEGVEPDQFTFPRVLKACAGLGLIRVGEKVHLDAVRFGFGFDGF-VLN 233
+A+ Y M G++PD + FP +LKA A L + +G+++H +FG+G D V N
Sbjct: 78 LREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVAN 137
Query: 234 ALVDMYAKCGDIVKARTVFDRIGNKDLISYNSMLTGYIHHGLLVEAFDIFRGMILNGFDP 293
LV++Y KCGD VFDRI ++ +S+NS+++ A + FR M+ +P
Sbjct: 138 TLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEP 197
Query: 294 DPVAISSILANASL------LRIGAQVHGWVLRRGVEWDLCIANSLIVVYSKDGKLDQAC 347
+ S++ S L +G QVH + LR+G E + I N+L+ +Y K GKL +
Sbjct: 198 SSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSK 256
Query: 348 WLFDHMPQKDVVSWNSIIHAHSKDH---EALIYFEQMERDGVLPDHLTFVSLLSACAHLG 404
L +D+V+WN+++ + ++ EAL Y +M +GV PD T S+L AC+HL
Sbjct: 257 VLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLE 316
Query: 405 SVKVGERLFSVMVEKYGISPRVEHYACMVNLY 436
++ G+ L + ++ + + +V++Y
Sbjct: 317 MLRTGKELHAYALKNGSLDENSFVGSALVDMY 348
>sp|Q9C6T2|PPR68_ARATH Pentatricopeptide repeat-containing protein At1g31920
OS=Arabidopsis thaliana GN=PCMP-H11 PE=2 SV=1
Length = 606
Score = 249 bits (636), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 128/374 (34%), Positives = 221/374 (59%), Gaps = 8/374 (2%)
Query: 159 AFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKACAGLGLIRVGEKVHL 218
F +N++I GY + +E+A+ Y +M + G EPD FT+P +LKAC L IR G+++H
Sbjct: 97 TFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHG 156
Query: 219 DAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISYNSMLTGYIHHGLLVE 278
+ G D FV N+L++MY +CG++ + VF+++ +K S++SM++ G+ E
Sbjct: 157 QVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSE 216
Query: 279 AFDIFRGMI--LNGFDPDPVAISSIL--ANASLLRIGAQVHGWVLRRGVEWDLCIANSLI 334
+FRGM N + +S++L AN L +G +HG++LR E ++ + SL+
Sbjct: 217 CLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLV 276
Query: 335 VVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHA---HSKDHEALIYFEQMERDGVLPDHL 391
+Y K G LD+A +F M +++ ++++++I H + AL F +M ++G+ PDH+
Sbjct: 277 DMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHV 336
Query: 392 TFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVNLYGRAGLIDEAYSMIVE 451
+VS+L+AC+H G VK G R+F+ M+++ + P EHY C+V+L GRAGL++EA I +
Sbjct: 337 VYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETI-Q 395
Query: 452 KMEFEASPVVWGALLYACYLHGNVCMGETAAQKLFELEPDNEHNFELLIKIYGNAGRLDD 511
+ E + V+W L C + N+ +G+ AAQ+L +L N ++ L+ +Y DD
Sbjct: 396 SIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDD 455
Query: 512 VERVERMLVDRGLE 525
V R + +GL+
Sbjct: 456 VARTRTEIAIKGLK 469
Score = 112 bits (280), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 150/289 (51%), Gaps = 8/289 (2%)
Query: 83 VQNGITVQTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLI 142
+Q G T+ LL+ C +LK++ G ++H + L + + + L+ +Y G +
Sbjct: 124 MQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEM 183
Query: 143 DEAHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQM-EEEGVEPDQFTFPRVL 201
+ + VF+++ ++TA + W+S++S A +G + + + L+ M E ++ ++ L
Sbjct: 184 ELSSAVFEKLESKTAAS--WSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSAL 241
Query: 202 KACAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLI 261
ACA G + +G +H +R + V +LVDMY KCG + KA +F ++ ++ +
Sbjct: 242 LACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNL 301
Query: 262 SYNSMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSIL---ANASLLRIGAQVHGWV 318
+Y++M++G HG A +F MI G +PD V S+L +++ L++ G +V +
Sbjct: 302 TYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEM 361
Query: 319 LRRG-VEWDLCIANSLIVVYSKDGKLDQACWLFDHMP-QKDVVSWNSII 365
L+ G VE L+ + + G L++A +P +K+ V W + +
Sbjct: 362 LKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFL 410
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 248 bits (634), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 144/439 (32%), Positives = 239/439 (54%), Gaps = 42/439 (9%)
Query: 93 TFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLIDEAHQVFDQM 152
TF +L+ C + G K+H L + + L+ +Y G + EA V D+M
Sbjct: 142 TFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEM 201
Query: 153 SNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKACAGLGLIRV 212
S R + WNSL+ GYA+ ++DA+ + +ME + D T +L A + V
Sbjct: 202 SRRDVVS--WNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV 259
Query: 213 GEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISYNSMLTGYIH 272
MY K +F ++G K L+S+N M+ Y+
Sbjct: 260 -------------------------MYVK--------DMFFKMGKKSLVSWNVMIGVYMK 286
Query: 273 HGLLVEAFDIFRGMILNGFDPDPVAISSIL---ANASLLRIGAQVHGWVLRRGVEWDLCI 329
+ + VEA +++ M +GF+PD V+I+S+L + S L +G ++HG++ R+ + +L +
Sbjct: 287 NAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLL 346
Query: 330 ANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAHS---KDHEALIYFEQMERDGV 386
N+LI +Y+K G L++A +F++M +DVVSW ++I A+ + +A+ F +++ G+
Sbjct: 347 ENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGL 406
Query: 387 LPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVNLYGRAGLIDEAY 446
+PD + FV+ L+AC+H G ++ G F +M + Y I+PR+EH ACMV+L GRAG + EAY
Sbjct: 407 VPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAY 466
Query: 447 SMIVEKMEFEASPVVWGALLYACYLHGNVCMGETAAQKLFELEPDNEHNFELLIKIYGNA 506
I + M E + VWGALL AC +H + +G AA KLF+L P+ + LL IY A
Sbjct: 467 RFI-QDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKA 525
Query: 507 GRLDDVERVERMLVDRGLE 525
GR ++V + ++ +GL+
Sbjct: 526 GRWEEVTNIRNIMKSKGLK 544
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 195/414 (47%), Gaps = 41/414 (9%)
Query: 113 LHRLIPTNLLRKNKGISSKLLRLYATFGLIDEAHQVFDQMSNRTAFAFPWNSLISGYAEL 172
+H I LR N + KL+R YA+ + A +VFD++ R N +I Y
Sbjct: 61 VHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIII--NVMIRSYVNN 118
Query: 173 GEYEDAIALYFQMEEEGVEPDQFTFPRVLKACAGLGLIRVGEKVHLDAVRFGFGFDGFVL 232
G Y + + ++ M V PD +TFP VLKAC+ G I +G K+H A + G FV
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVG 178
Query: 233 NALVDMYAKCGDIVKARTVFDRIGNKDLISYNSMLTGYIHHGLLVEAFDIFRGMILNGFD 292
N LV MY KCG + +AR V D + +D++S+NS++ GY + +A ++ R M
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKIS 238
Query: 293 PDPVAISSILANASLLRIGAQVHGWVLRRGVEWDLCIANSLIVVYSKDGKLDQACWLFDH 352
D ++S+L S + N V+Y KD +F
Sbjct: 239 HDAGTMASLLPAVS-------------------NTTTEN---VMYVKD--------MFFK 268
Query: 353 MPQKDVVSWNSIIHAHSKDH---EALIYFEQMERDGVLPDHLTFVSLLSACAHLGSVKVG 409
M +K +VSWN +I + K+ EA+ + +ME DG PD ++ S+L AC ++ +G
Sbjct: 269 MGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLG 328
Query: 410 ERLFSVMVEKYGISPRVEHYACMVNLYGRAGLIDEAYSMIVEKMEFEASPVVWGALLYAC 469
+++ +E+ + P + ++++Y + G +++A + E M+ V W A++ A
Sbjct: 329 KKIHG-YIERKKLIPNLLLENALIDMYAKCGCLEKARD-VFENMK-SRDVVSWTAMISAY 385
Query: 470 YLHGNVCMGETAAQKLFE--LEPDNEHNFELLIKIYGNAGRLDDVERVERMLVD 521
G C KL + L PD+ F + +AG L++ +++ D
Sbjct: 386 GFSGRGCDAVALFSKLQDSGLVPDS-IAFVTTLAACSHAGLLEEGRSCFKLMTD 438
Score = 72.4 bits (176), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 7/167 (4%)
Query: 85 NGITVQTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLIDE 144
+G + S+L C A+ G K+H I L N + + L+ +YA G +++
Sbjct: 303 DGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEK 362
Query: 145 AHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKAC 204
A VF+ M +R + W ++IS Y G DA+AL+ ++++ G+ PD F L AC
Sbjct: 363 ARDVFENMKSRDVVS--WTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAAC 420
Query: 205 AGLGLIRVGE---KVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKA 248
+ GL+ G K+ D + + L +VD+ + G + +A
Sbjct: 421 SHAGLLEEGRSCFKLMTDHYKITPRLEH--LACMVDLLGRAGKVKEA 465
>sp|Q9SKQ4|PP167_ARATH Pentatricopeptide repeat-containing protein At2g21090
OS=Arabidopsis thaliana GN=PCMP-E48 PE=2 SV=1
Length = 597
Score = 248 bits (632), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 166/544 (30%), Positives = 269/544 (49%), Gaps = 72/544 (13%)
Query: 50 PKSSPT--PLLTNQKAFPKTKLQA-LDSIIQDLESSVQNGITVQTETFASLLETCYQLKA 106
P S+P P+ Q K +A L + LES Q GI + + ASLL+ C K+
Sbjct: 2 PISNPRKRPICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKS 61
Query: 107 VEHGIKLHR-LIPTNLLRKNKGISSKLLRLYATFGLIDEAHQVFDQMSNRTAFAF----- 160
++ G +HR L T R N +S+ L+ +Y G +A +VFDQM R +++
Sbjct: 62 LKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVS 121
Query: 161 ------------------------PWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFT 196
WN+++ GYA+ G +A+ Y + G++ ++F+
Sbjct: 122 GYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFS 181
Query: 197 FPRVLKACAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIG 256
F +L AC +++ + H + GF + + +++D YAKCG + A+ FD +
Sbjct: 182 FAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMT 241
Query: 257 NKDL-------------------------------ISYNSMLTGYIHHGLLVEAFDIFRG 285
KD+ +S+ +++ GY+ G A D+FR
Sbjct: 242 VKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRK 301
Query: 286 MILNGFDPDPVAISSIL-ANASL--LRIGAQVHGWVLRRGVEWDLCIANSLIVVYSKDGK 342
MI G P+ SS L A+AS+ LR G ++HG+++R V + + +SLI +YSK G
Sbjct: 302 MIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGS 361
Query: 343 LDQACWLFDHMPQK-DVVSWNSIIHA---HSKDHEALIYFEQMERDGVLPDHLTFVSLLS 398
L+ + +F K D V WN++I A H H+AL + M + V P+ T V +L+
Sbjct: 362 LEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILN 421
Query: 399 ACAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVNLYGRAGLIDEAYSMIVEKMEFEAS 458
AC+H G V+ G R F M ++GI P EHYAC+++L GRAG E I E+M FE
Sbjct: 422 ACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKI-EEMPFEPD 480
Query: 459 PVVWGALLYACYLHGNVCMGETAAQKLFELEPDNEHNFELLIKIYGNAGRLDDVERVERM 518
+W A+L C +HGN +G+ AA +L +L+P++ + LL IY + G+ + VE++ +
Sbjct: 481 KHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGV 540
Query: 519 LVDR 522
+ R
Sbjct: 541 MKKR 544
>sp|O64705|PP184_ARATH Pentatricopeptide repeat-containing protein At2g34400
OS=Arabidopsis thaliana GN=PCMP-E23 PE=3 SV=2
Length = 621
Score = 247 bits (631), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 140/447 (31%), Positives = 250/447 (55%), Gaps = 13/447 (2%)
Query: 85 NGITVQTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLIDE 144
+G+ T+ + C +L+ + G +H + L ++ I+ L+ +YA G +
Sbjct: 126 SGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGY 185
Query: 145 AHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKAC 204
A ++FD+++ R + WNS+ISGY+E G +DA+ L+ +MEEEG EPD+ T +L AC
Sbjct: 186 ARKLFDEITERDTVS--WNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGAC 243
Query: 205 AGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISYN 264
+ LG +R G + A+ G F+ + L+ MY KCGD+ AR VF+++ KD +++
Sbjct: 244 SHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWT 303
Query: 265 SMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSILA---NASLLRIGAQVHGWVLRR 321
+M+T Y +G EAF +F M G PD +S++L+ + L +G Q+
Sbjct: 304 AMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASEL 363
Query: 322 GVEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAHSKD---HEALIYF 378
++ ++ +A L+ +Y K G++++A +F+ MP K+ +WN++I A++ EAL+ F
Sbjct: 364 SLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLF 423
Query: 379 EQMERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEHYACMVNLYGR 438
++M V P +TF+ +LSAC H G V G R F M +G+ P++EHY +++L R
Sbjct: 424 DRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSR 480
Query: 439 AGLIDEAYSMIVEKMEFEASPVVWGALLYACYLHGNVCMGETAAQKLFEL-EPDNEHNFE 497
AG++DEA+ +E+ + ++ A+L AC+ +V + E A + L E+ E N N+
Sbjct: 481 AGMLDEAWE-FMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYV 539
Query: 498 LLIKIYGNAGRLDDVERVERMLVDRGL 524
+ + + D+ ++ ++ DRG+
Sbjct: 540 ISSNVLADMKMWDESAKMRALMRDRGV 566
Score = 178 bits (452), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 111/328 (33%), Positives = 179/328 (54%), Gaps = 27/328 (8%)
Query: 160 FPWNSLISGYAEL-GEYEDAIALYFQMEEEGVEPDQFTFPRVLKACAGLGLIRVGEKVHL 218
+ +N +I G ++E A++LY +M+ G++PD+FT+ V ACA L I VG VH
Sbjct: 97 YSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHS 156
Query: 219 DAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISYNSMLTGYIHHGLLVE 278
+ G D + ++L+ MYAKCG + AR +FD I +D +S+NSM++GY G +
Sbjct: 157 SLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKD 216
Query: 279 AFDIFRGMILNGFDPDPVAISSILANASL---LRIGAQVHGWVLRRGVEWDLCIANSLIV 335
A D+FR M GF+PD + S+L S LR G + + + + + + LI
Sbjct: 217 AMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLIS 276
Query: 336 VYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAHS---KDHEALIYFEQMERDGVLPDHLT 392
+Y K G LD A +F+ M +KD V+W ++I +S K EA F +ME+ GV PD T
Sbjct: 277 MYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGT 336
Query: 393 FVSLLSACAHLGSVKVGERLFSVMVEKYGISPRVEH----YACMVNLYGRAGLIDEAYSM 448
++LSAC +G++++G++ +E + ++H +V++YG+ G ++EA +
Sbjct: 337 LSTVLSACGSVGALELGKQ-----IETHASELSLQHNIYVATGLVDMYGKCGRVEEALRV 391
Query: 449 IVEKMEFEASPV----VWGALLYACYLH 472
FEA PV W A++ A Y H
Sbjct: 392 ------FEAMPVKNEATWNAMITA-YAH 412
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 153/336 (45%), Gaps = 34/336 (10%)
Query: 84 QNGITVQTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSKLLRLYATFGLID 143
+ G T S+L C L + G L + T + + + SKL+ +Y G +D
Sbjct: 226 EEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLD 285
Query: 144 EAHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVEPDQFTFPRVLKA 203
A +VF+QM + A W ++I+ Y++ G+ +A L+F+ME+ GV PD T VL A
Sbjct: 286 SARRVFNQMIKKDRVA--WTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSA 343
Query: 204 CAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTVFDRIGNKDLISY 263
C +G + +G+++ A + +V LVDMY KCG + +A VF+ + K+ ++
Sbjct: 344 CGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATW 403
Query: 264 NSMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSILANASLLRIGAQ-VHGWVLRRG 322
N+M+T Y H G EA +F M + D + + S +A L+ G + H G
Sbjct: 404 NAMITAYAHQGHAKEALLLFDRMSVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFG 463
Query: 323 VEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSIIHAHSKDHEALIYFEQME 382
+ + ++I + S+ G LD+A W F ME
Sbjct: 464 LVPKIEHYTNIIDLLSRAGMLDEA-WEF------------------------------ME 492
Query: 383 RDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVE 418
R PD + ++L AC V + E+ +++E
Sbjct: 493 RFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLME 528
>sp|Q9LYU9|PP378_ARATH Pentatricopeptide repeat-containing protein At5g13270,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H90 PE=2
SV=1
Length = 752
Score = 246 bits (627), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 141/464 (30%), Positives = 245/464 (52%), Gaps = 16/464 (3%)
Query: 72 LDSIIQDLESSVQNGITVQTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNKGISSK 131
LD + + +G + + +LL++ +A++ G ++H + L N I +
Sbjct: 165 LDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETG 224
Query: 132 LLRLYATFGLIDEAHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQMEEEGVE 191
++ +Y G + A +VFDQM+ + A L+ GY + G DA+ L+ + EGVE
Sbjct: 225 IVNMYVKCGWLVGAKRVFDQMAVKKPVAC--TGLMVGYTQAGRARDALKLFVDLVTEGVE 282
Query: 192 PDQFTFPRVLKACAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIVKARTV 251
D F F VLKACA L + +G+++H + G + V LVD Y KC A
Sbjct: 283 WDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRA 342
Query: 252 FDRIGNKDLISYNSMLTGYIHHGLLVEAFDIFRGM------ILNGFDPDPV-AISSILAN 304
F I + +S++++++GY EA F+ + ILN F + S+LA+
Sbjct: 343 FQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLAD 402
Query: 305 ASLLRIGAQVHGWVLRRGVEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNSI 364
+ IG QVH ++R + ++LI +YSK G LD A +F+ M D+V+W +
Sbjct: 403 CN---IGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAF 459
Query: 365 IHAHS---KDHEALIYFEQMERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEKYG 421
I H+ EAL FE+M G+ P+ +TF+++L+AC+H G V+ G+ M+ KY
Sbjct: 460 ISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYN 519
Query: 422 ISPRVEHYACMVNLYGRAGLIDEAYSMIVEKMEFEASPVVWGALLYACYLHGNVCMGETA 481
++P ++HY CM+++Y R+GL+DEA + + M FE + W L C+ H N+ +GE A
Sbjct: 520 VAPTIDHYDCMIDIYARSGLLDEALKFM-KNMPFEPDAMSWKCFLSGCWTHKNLELGEIA 578
Query: 482 AQKLFELEPDNEHNFELLIKIYGNAGRLDDVERVERMLVDRGLE 525
++L +L+P++ + L +Y AG+ ++ + +++ +R L+
Sbjct: 579 GEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLK 622
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 216/428 (50%), Gaps = 16/428 (3%)
Query: 67 TKLQALDSIIQDLESSVQNGITVQTETFASLLETCYQLKAVEHGIKLHRLIPTNLLRKNK 126
+K + L+ + L+ + G++V + ++ L E C +L+++ HG LH + + +
Sbjct: 59 SKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSV 118
Query: 127 GISSKLLRLYATFGLIDEAHQVFDQMSNRTAFAFPWNSLISGYAELGEYEDAIALYFQME 186
+ + +L++Y +++A ++FD+MS A + ++IS YAE G + A+ L+ M
Sbjct: 119 LLQNCVLQMYCECRSLEDADKLFDEMSELNAVSR--TTMISAYAEQGILDKAVGLFSGML 176
Query: 187 EEGVEPDQFTFPRVLKACAGLGLIRVGEKVHLDAVRFGFGFDGFVLNALVDMYAKCGDIV 246
G +P + +LK+ + G ++H +R G + + +V+MY KCG +V
Sbjct: 177 ASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLV 236
Query: 247 KARTVFDRIGNKDLISYNSMLTGYIHHGLLVEAFDIFRGMILNGFDPDPVAISSIL-ANA 305
A+ VFD++ K ++ ++ GY G +A +F ++ G + D S +L A A
Sbjct: 237 GAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACA 296
Query: 306 SL--LRIGAQVHGWVLRRGVEWDLCIANSLIVVYSKDGKLDQACWLFDHMPQKDVVSWNS 363
SL L +G Q+H V + G+E ++ + L+ Y K + AC F + + + VSW++
Sbjct: 297 SLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSA 356
Query: 364 IIHAH---SKDHEALIYFEQM-ERDGVLPDHLTFVSLLSACAHLGSVKVGERLFSVMVEK 419
II + S+ EA+ F+ + ++ + + T+ S+ AC+ L +G ++ + +++
Sbjct: 357 IISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKR 416
Query: 420 YGISPRVEHYACMVNLYGRAGLIDEAYSMIVEKMEFEASPVVWGALLYACYLHGNVCMGE 479
I + A ++ +Y + G +D+A + + E M+ V W A + +GN
Sbjct: 417 SLIGSQYGESA-LITMYSKCGCLDDA-NEVFESMD-NPDIVAWTAFISGHAYYGNA---- 469
Query: 480 TAAQKLFE 487
+ A +LFE
Sbjct: 470 SEALRLFE 477
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.138 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 193,124,453
Number of Sequences: 539616
Number of extensions: 8207473
Number of successful extensions: 27290
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 365
Number of HSP's successfully gapped in prelim test: 81
Number of HSP's that attempted gapping in prelim test: 19519
Number of HSP's gapped (non-prelim): 2073
length of query: 526
length of database: 191,569,459
effective HSP length: 122
effective length of query: 404
effective length of database: 125,736,307
effective search space: 50797468028
effective search space used: 50797468028
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 64 (29.3 bits)