Query 009784
Match_columns 526
No_of_seqs 483 out of 3258
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 12:55:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009784.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009784hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fln_A Protease DO-like 2, chl 100.0 8.9E-63 3E-67 532.7 42.4 383 121-504 46-457 (539)
2 4a8c_A Periplasmic PH-dependen 100.0 2E-50 7E-55 430.6 38.7 366 111-502 15-403 (436)
3 3stj_A Protease DEGQ; serine p 100.0 4.3E-50 1.5E-54 415.6 30.1 304 111-436 15-337 (345)
4 3pv2_A DEGQ; trypsin fold, PDZ 100.0 6.3E-50 2.2E-54 428.1 29.1 367 110-501 20-425 (451)
5 1ky9_A Protease DO, DEGP, HTRA 100.0 4E-48 1.4E-52 413.8 22.9 331 148-502 85-423 (448)
6 1te0_A Protease DEGS; two doma 100.0 9.3E-47 3.2E-51 386.7 28.5 298 111-434 11-316 (318)
7 3qo6_A Protease DO-like 1, chl 100.0 1.3E-45 4.4E-50 382.8 26.3 296 117-435 22-335 (348)
8 1y8t_A Hypothetical protein RV 100.0 5.5E-44 1.9E-48 367.0 29.9 281 111-434 8-315 (324)
9 1lcy_A HTRA2 serine protease; 100.0 5.9E-45 2E-49 374.5 21.3 290 111-432 17-323 (325)
10 3num_A Serine protease HTRA1; 100.0 1.3E-43 4.5E-48 365.5 20.9 292 111-434 16-323 (332)
11 3sti_A Protease DEGQ; serine p 100.0 3.1E-33 1.1E-37 275.8 17.0 209 111-329 15-241 (245)
12 1l1j_A Heat shock protease HTR 100.0 4.6E-33 1.6E-37 273.8 17.1 214 111-332 6-239 (239)
13 3lgi_A Protease DEGS; stress-s 100.0 6.8E-31 2.3E-35 258.0 22.0 205 111-329 22-233 (237)
14 3tjo_A Serine protease HTRA1; 100.0 1.6E-29 5.5E-34 247.3 19.1 193 111-320 33-230 (231)
15 3k6y_A Serine protease, possib 99.9 1.3E-26 4.4E-31 227.3 23.4 190 113-324 35-230 (237)
16 2w5e_A Putative serine proteas 99.9 6.2E-23 2.1E-27 189.7 17.0 136 148-307 20-155 (163)
17 2as9_A Serine protease; trypsi 99.9 5.3E-23 1.8E-27 197.9 14.9 182 123-320 3-203 (210)
18 2w7s_A Serine protease SPLA; h 99.8 2.3E-20 7.8E-25 177.6 11.2 173 134-318 8-197 (200)
19 1agj_A Epidermolytic toxin A; 99.8 6.1E-20 2.1E-24 180.0 11.0 160 149-318 55-240 (242)
20 2l97_A HTRA, putative serine p 99.8 1.1E-20 3.9E-25 169.1 4.7 124 300-434 2-128 (134)
21 2vid_A Serine protease SPLB; h 99.8 4E-19 1.4E-23 169.0 15.6 174 134-318 8-201 (204)
22 2h5c_A Alpha-lytic protease; s 99.8 5.7E-18 1.9E-22 161.5 18.6 154 150-315 17-191 (198)
23 2o8l_A V8 protease, taphylococ 99.8 2.7E-17 9.3E-22 164.5 21.1 160 148-320 33-211 (274)
24 1wcz_A Glutamyl endopeptidase; 99.7 3.6E-17 1.2E-21 163.1 18.6 160 148-320 33-211 (268)
25 1qtf_A Exfoliative toxin B; se 99.7 4E-18 1.4E-22 167.7 8.9 144 148-310 47-214 (246)
26 1hpg_A Glutamic acid specific 99.7 2.3E-16 7.7E-21 149.0 18.4 156 149-315 12-182 (187)
27 2oua_A Serine protease, protei 99.7 7.4E-16 2.5E-20 145.6 17.6 154 149-314 14-181 (188)
28 2qa9_E Streptogrisin-B; chymot 99.7 1.2E-15 4.3E-20 143.3 15.9 160 149-316 12-181 (185)
29 2ea3_A Chymotrypsin; celloulom 99.6 5.1E-15 1.7E-19 139.9 16.3 149 151-314 18-175 (189)
30 1mbm_A NSP4 proteinase, chymot 99.6 1.9E-15 6.5E-20 138.9 9.8 116 148-292 14-130 (198)
31 2pfe_A Protease A, alkaline se 99.6 7.9E-15 2.7E-19 138.3 14.4 151 150-314 15-178 (186)
32 2sga_A Proteinase A; hydrolase 99.6 9.5E-15 3.3E-19 136.8 13.1 152 149-315 12-176 (181)
33 1pq7_A Trypsin; ultra-high res 99.5 5.4E-13 1.8E-17 128.7 16.0 163 132-294 5-199 (224)
34 1fxy_A Coagulation factor XA-t 99.5 8.9E-13 3E-17 127.6 16.5 187 131-318 4-223 (228)
35 1ton_A Tonin; hydrolase(serine 99.5 2.2E-12 7.7E-17 125.2 18.8 186 131-319 4-231 (235)
36 3fan_A Non-structural protein; 99.5 1.4E-13 4.8E-18 128.6 9.7 117 148-294 29-146 (213)
37 2pzd_A Serine protease HTRA2; 99.5 6.1E-14 2.1E-18 121.1 6.7 97 322-433 1-103 (113)
38 1npm_A Neuropsin; serine prote 99.5 2E-12 6.9E-17 124.8 18.0 184 132-318 5-223 (225)
39 1hj8_A Trypsin I; hydrolase, r 99.4 1.9E-12 6.6E-17 124.8 17.3 184 132-318 5-218 (222)
40 3mfj_A Cationic trypsin; serin 99.4 2.6E-12 8.8E-17 124.0 17.9 183 133-318 6-219 (223)
41 2zch_P Prostate-specific antig 99.4 2.8E-12 9.5E-17 124.7 17.8 187 132-319 5-233 (237)
42 1aut_C Activated protein C; se 99.4 2.2E-12 7.4E-17 126.6 17.1 188 132-319 5-238 (250)
43 4i8h_A Cationic trypsin, beta- 99.4 2.4E-12 8.2E-17 123.8 17.0 185 132-319 5-220 (223)
44 2p3w_A Probable serine proteas 99.4 8.3E-14 2.8E-18 120.2 5.1 97 322-433 1-103 (112)
45 1ao5_A Glandular kallikrein-13 99.4 3.9E-12 1.3E-16 123.6 17.5 185 132-319 5-233 (237)
46 1gvz_A Kallikrein-1E2; antigen 99.4 2.6E-12 8.9E-17 124.9 16.1 159 133-294 6-207 (237)
47 1cgh_A Cathepsin G; inflammati 99.4 4.1E-12 1.4E-16 122.6 17.3 181 133-318 6-221 (224)
48 1mza_A Pro-granzyme K; apoptos 99.4 4.5E-12 1.5E-16 123.5 17.6 190 128-318 3-233 (240)
49 1lo6_A Kallikrein 6, HK6; seri 99.4 4.8E-12 1.6E-16 122.1 17.5 185 132-319 5-220 (223)
50 2qxi_A Kallikrein-7; S1 pocket 99.4 3.8E-12 1.3E-16 122.9 16.4 183 133-318 6-219 (224)
51 2bdg_A Kallikrein-4; serine pr 99.4 4.6E-12 1.6E-16 122.2 16.7 184 132-318 5-220 (223)
52 2psx_A Kallikrein-5; zinc inhi 99.4 4.4E-12 1.5E-16 122.6 16.3 184 132-318 5-222 (227)
53 1t8o_A Chymotrypsin A; chymotr 99.4 6E-12 2.1E-16 123.2 17.3 196 123-319 11-242 (245)
54 1iau_A Granzyme B; hydrolase-h 99.4 8.5E-12 2.9E-16 120.5 17.7 181 133-318 6-223 (227)
55 3s9c_A Vipera russelli protein 99.4 7.3E-12 2.5E-16 121.2 17.1 187 132-321 5-226 (234)
56 2xw9_A Complement factor D; im 99.4 8.5E-12 2.9E-16 120.4 17.0 184 134-318 7-226 (228)
57 1a7s_A Heparin binding protein 99.4 7.7E-12 2.6E-16 120.6 16.6 179 132-320 5-218 (225)
58 1fuj_A PR3, myeloblastin; hydr 99.4 8E-12 2.7E-16 120.0 16.7 150 133-292 6-192 (221)
59 3s69_A Thrombin-like enzyme de 99.4 1E-11 3.5E-16 120.0 17.4 188 132-320 5-225 (234)
60 1spj_A Kallikrein 1; serine pr 99.4 9.5E-12 3.2E-16 120.9 17.2 184 132-318 5-233 (238)
61 1azz_A Collagenase; complex (s 99.4 3.8E-12 1.3E-16 123.0 14.2 185 132-318 5-221 (226)
62 1si5_H Scatter factor, hepatoc 99.4 1.9E-11 6.5E-16 119.0 19.2 183 138-320 10-227 (240)
63 1bru_P Elastase, PPE; serine p 99.4 1.5E-11 5.1E-16 119.9 18.4 162 133-294 6-211 (241)
64 4ag1_A Chymase; hydrolase-de n 99.4 2.8E-11 9.6E-16 116.5 20.0 182 133-320 6-224 (226)
65 1sgf_A 7S NGF, nerve growth fa 99.4 4.3E-12 1.5E-16 123.6 14.3 190 128-320 4-237 (240)
66 2z7f_E Leukocyte elastase; ser 99.4 5.2E-12 1.8E-16 121.3 14.6 176 132-317 5-215 (218)
67 2aiq_A Protein C activator; sn 99.4 8.1E-12 2.8E-16 121.1 16.1 184 133-320 6-222 (231)
68 3gov_B MAsp-1; complement, ser 99.4 1.2E-11 4.1E-16 120.6 17.0 186 133-318 6-246 (251)
69 4e7n_A Snake-venom thrombin-li 99.4 1.1E-11 3.8E-16 120.1 16.4 187 133-320 6-229 (238)
70 3h7t_A Group 3 allergen smipp- 99.4 7.2E-12 2.5E-16 121.0 15.0 186 133-320 6-229 (235)
71 3beu_A Trypsin, SGT; beta shee 99.4 2.3E-11 8E-16 116.9 18.4 184 131-319 4-221 (224)
72 2f91_A Hepatopancreas trypsin; 99.4 1.8E-11 6.2E-16 119.0 17.7 163 132-294 5-211 (237)
73 1eq9_A Chymotrypsin; FIRE ANT, 99.4 1.1E-11 3.7E-16 119.5 16.0 183 132-317 5-218 (222)
74 1orf_A Granzyme A; hydrolase-h 99.4 1.8E-11 6.2E-16 118.7 17.3 185 132-318 5-229 (234)
75 3ncl_A Suppressor of tumorigen 99.4 1.6E-11 5.3E-16 119.3 16.8 186 132-317 5-237 (241)
76 1gvk_B Elastase 1, peptide inh 99.4 1.8E-11 6.2E-16 119.2 17.2 161 134-294 7-210 (240)
77 1p3c_A Glutamyl-endopeptidase; 99.3 4.9E-12 1.7E-16 121.1 12.4 157 149-318 30-212 (215)
78 1ym0_A Fibrinotic enzyme compo 99.3 2.8E-11 9.7E-16 117.4 18.0 187 133-320 6-236 (238)
79 2hlc_A Collagenase; serine pro 99.3 1.1E-11 3.6E-16 120.0 14.9 185 134-318 7-225 (230)
80 2jkh_A Activated factor XA hea 99.3 9.1E-12 3.1E-16 121.3 14.2 188 132-319 5-232 (241)
81 3tvj_B Mannan-binding lectin s 99.3 1.1E-11 3.7E-16 120.2 14.7 188 131-318 4-238 (242)
82 1euf_A Duodenase; serine prote 99.3 1.9E-11 6.5E-16 118.1 16.3 158 133-293 6-199 (227)
83 2asu_B Hepatocyte growth facto 99.3 2.2E-11 7.5E-16 118.2 16.7 181 138-318 8-224 (234)
84 1elt_A Elastase; serine protei 99.3 1.8E-11 6.2E-16 118.8 15.8 162 133-294 6-209 (236)
85 2any_A Kininogenin, plasma kal 99.3 2.4E-11 8E-16 118.4 16.7 187 133-319 6-235 (241)
86 3rp2_A RAT MAST cell protease 99.3 4E-11 1.4E-15 115.1 18.0 165 148-318 27-222 (224)
87 2zgc_A Granzyme M; serine prot 99.3 3.5E-11 1.2E-15 117.4 17.5 187 133-319 6-228 (240)
88 1m9u_A Earthworm fibrinolytic 99.3 1.2E-11 4E-16 120.5 13.9 159 134-292 7-210 (241)
89 3bg8_A Coagulation factor XIA 99.3 2.8E-11 9.6E-16 117.7 16.5 186 133-318 6-234 (238)
90 1ddj_A Plasminogen; catalytic 99.3 3.8E-11 1.3E-15 117.5 17.1 192 128-319 18-244 (247)
91 2oq5_A Transmembrane protease, 99.3 6.7E-11 2.3E-15 114.5 18.4 186 132-317 5-228 (232)
92 2qy0_B Complement C1R subcompo 99.3 8.4E-12 2.9E-16 121.5 12.0 187 131-319 4-238 (242)
93 2r0l_A Hepatocyte growth facto 99.3 4E-11 1.4E-15 117.1 16.7 188 132-319 5-238 (248)
94 2i4s_A General secretion pathw 99.3 3.7E-12 1.3E-16 108.6 8.1 101 308-430 4-105 (105)
95 2wph_S Coagulation factor IXA 99.3 2.6E-11 8.9E-16 117.5 15.1 187 132-318 5-231 (235)
96 3gyl_B Prostasin; ENAC, zymoge 99.3 3.4E-11 1.2E-15 118.3 16.0 163 132-294 5-216 (261)
97 3fzz_A Granzyme C; hydrolase, 99.3 5.4E-11 1.9E-15 114.4 16.7 167 148-319 27-225 (227)
98 3mhw_U Urokinase-type plasmino 99.3 4.2E-11 1.4E-15 116.5 16.0 171 148-318 28-244 (247)
99 3rm2_H Thrombin heavy chain; s 99.3 3.9E-11 1.3E-15 117.5 15.5 187 132-318 5-253 (259)
100 1rtf_B (TC)-T-PA, two chain ti 99.3 7.1E-11 2.4E-15 115.6 17.3 170 148-317 29-248 (252)
101 2bz6_H Blood coagulation facto 99.3 4E-11 1.4E-15 117.7 15.4 190 131-320 4-240 (254)
102 2bdy_A Thrombin; thrombin, com 99.3 4.7E-11 1.6E-15 119.8 16.1 193 127-319 30-284 (289)
103 1fiw_A Beta-acrosin heavy chai 99.3 9.9E-11 3.4E-15 117.6 18.0 187 132-318 5-247 (290)
104 1yc0_A Hepatocyte growth facto 99.3 5.9E-11 2E-15 118.6 16.1 193 127-319 35-273 (283)
105 2jde_A Urokinase-type plasmino 99.3 6E-11 2E-15 117.8 16.0 192 127-318 23-267 (276)
106 1pyt_D TC, PCPA-TC, chymotryps 99.3 4.4E-11 1.5E-15 117.3 14.9 147 148-294 40-222 (251)
107 2olg_A Pro-phenoloxidase activ 99.3 5.1E-11 1.7E-15 118.6 15.0 165 130-294 25-251 (278)
108 4dgj_A Enteropeptidase catalyt 99.3 5.1E-11 1.7E-15 115.3 14.2 185 133-317 6-232 (235)
109 2f9n_A Alpha I tryptase; serin 99.3 4.7E-11 1.6E-15 116.5 13.9 186 133-318 6-240 (245)
110 3i18_A LMO2051 protein; alpha- 99.2 9.6E-12 3.3E-16 105.1 7.5 73 352-434 6-78 (100)
111 3h7o_A Group 3 allergen smipp- 99.2 2.6E-11 8.8E-16 116.7 11.3 168 150-319 27-225 (228)
112 2vz5_A TAX1-binding protein 3; 99.2 3.9E-12 1.3E-16 114.2 4.3 100 321-432 32-135 (139)
113 1fon_A Procarboxypeptidase A-S 99.2 2.6E-11 8.9E-16 118.0 10.5 170 149-318 26-236 (240)
114 1z8g_A Serine protease hepsin; 99.2 1.7E-10 5.8E-15 120.0 16.8 194 126-319 116-359 (372)
115 1zyo_A Serine protease; beta-b 99.2 2.1E-10 7.2E-15 107.9 14.9 149 149-314 27-185 (191)
116 3rle_A Golgi reassembly-stacki 99.2 3.9E-11 1.3E-15 114.9 10.1 130 351-501 14-151 (209)
117 1md8_A C1R complement serine p 99.2 7.4E-11 2.5E-15 120.8 12.6 190 127-318 89-326 (329)
118 2kjp_A Uncharacterized protein 99.2 2.4E-12 8.3E-17 107.0 1.0 72 353-434 1-72 (91)
119 2kl1_A YLBL protein; structure 99.2 1.1E-11 3.8E-16 103.6 4.9 74 351-434 3-76 (94)
120 1zjk_A Mannan-binding lectin s 99.2 1.3E-10 4.5E-15 121.9 14.3 192 127-318 161-399 (403)
121 3f1s_B Vitamin K-dependent pro 99.2 1.4E-10 4.7E-15 116.1 13.5 184 136-320 61-276 (283)
122 4f4o_C Haptoglobin; globin fol 99.2 2.2E-10 7.7E-15 118.1 15.3 193 126-320 101-345 (347)
123 1w9e_A Syntenin 1; cell adhesi 99.2 1.2E-10 3.9E-15 107.4 11.1 124 327-497 15-142 (166)
124 2vnt_A Urokinase-type plasmino 99.2 6.1E-10 2.1E-14 110.3 16.6 194 127-320 23-269 (276)
125 2b9l_A Prophenoloxidase activa 99.1 4.6E-10 1.6E-14 117.7 15.6 194 127-320 129-383 (394)
126 1gpz_A Complement C1R componen 99.1 3E-10 1E-14 119.0 13.8 190 127-318 157-394 (399)
127 3cp7_A Alkaline serine proteas 99.1 9.6E-10 3.3E-14 105.8 16.3 162 148-319 20-215 (218)
128 1elv_A Complement C1S componen 99.1 4.1E-10 1.4E-14 115.2 13.9 189 127-319 82-324 (333)
129 3h5c_B Vitamin K-dependent pro 99.1 4.5E-10 1.5E-14 114.0 13.8 182 135-317 101-314 (317)
130 2i6v_A General secretion pathw 99.1 3.3E-11 1.1E-15 99.1 4.4 68 353-430 19-87 (87)
131 2xxl_A GRAM-positive specific 99.1 1.1E-09 3.6E-14 115.4 17.1 166 128-293 119-345 (408)
132 3nxp_A Prethrombin-1; alloster 99.1 1.4E-10 4.9E-15 122.7 9.8 168 127-294 165-394 (424)
133 4dur_A Plasminogen, serine pro 99.0 1.8E-09 6.2E-14 122.2 15.5 193 127-319 561-788 (791)
134 1uit_A Human discs large 5 pro 99.0 4.9E-11 1.7E-15 103.5 1.6 91 319-425 7-105 (117)
135 2eaq_A LIM domain only protein 99.0 1.1E-10 3.7E-15 96.3 3.2 61 352-422 27-90 (90)
136 3gsl_A Disks large homolog 4; 99.0 2.4E-09 8.2E-14 100.4 12.6 120 352-496 34-165 (196)
137 2w4f_A Protein LAP4; structura 99.0 6.4E-10 2.2E-14 92.8 6.2 82 327-423 13-95 (97)
138 2pkt_A PDZ and LIM domain prot 99.0 4.3E-10 1.5E-14 92.9 5.0 60 353-424 27-89 (91)
139 3id1_A Regulator of sigma E pr 99.0 3.8E-10 1.3E-14 94.3 4.8 70 355-434 4-76 (95)
140 3cyy_A Tight junction protein 98.9 2.6E-10 8.9E-15 94.2 2.9 78 339-429 10-91 (92)
141 2eeh_A PDZ domain-containing p 98.9 1.1E-09 3.6E-14 92.2 6.4 75 327-423 21-96 (100)
142 1p1d_A PDZ45, glutamate recept 98.9 1.9E-09 6.5E-14 101.8 8.9 126 352-501 35-177 (196)
143 1x5q_A LAP4 protein; PDZ domai 98.9 1.3E-09 4.4E-14 93.3 6.5 83 327-424 25-108 (110)
144 2zpm_A Regulator of sigma E pr 98.9 4.2E-10 1.4E-14 92.8 3.3 67 355-432 6-73 (91)
145 2f83_A Coagulation factor XI; 98.9 2.1E-09 7.1E-14 119.2 9.6 168 127-294 387-597 (625)
146 3sfj_A TAX1-binding protein 3; 98.9 2E-09 7E-14 91.0 7.4 83 327-420 18-104 (104)
147 1qau_A Neuronal nitric oxide s 98.9 1.1E-09 3.9E-14 93.9 5.5 84 328-434 13-100 (112)
148 3r0h_A INAD, inactivation-NO-a 98.9 4.7E-09 1.6E-13 99.6 9.5 120 353-499 45-174 (206)
149 2qt5_A Glutamate receptor-inte 98.9 1.9E-08 6.5E-13 95.1 13.3 125 352-501 32-177 (200)
150 2fcf_A Multiple PDZ domain pro 98.9 1.1E-09 3.9E-14 92.4 4.3 82 327-422 15-100 (103)
151 2dls_A PDZ-rhogef, RHO guanine 98.9 4.2E-09 1.4E-13 87.4 7.3 59 353-422 29-88 (93)
152 2vsp_A PDZ domain-containing p 98.9 7.4E-10 2.5E-14 91.5 2.6 61 352-424 26-89 (91)
153 1arb_A Achromobacter protease 98.8 4.3E-08 1.5E-12 97.4 15.7 142 149-294 34-213 (268)
154 2rcz_A Tight junction protein 98.8 1E-09 3.4E-14 88.1 3.1 77 331-421 1-81 (81)
155 3bpu_A Membrane-associated gua 98.8 4.9E-09 1.7E-13 85.9 7.0 60 352-422 26-87 (88)
156 1wh1_A KIAA1095 protein; PDZ d 98.8 4.8E-10 1.6E-14 98.3 0.8 80 328-427 32-113 (124)
157 2xrc_A Human complement factor 98.8 1.4E-08 4.8E-13 111.3 12.1 190 127-318 321-554 (565)
158 4fgm_A Aminopeptidase N family 98.8 8.6E-09 3E-13 113.4 10.2 79 345-434 486-567 (597)
159 1rrk_A Complement factor B; BB 98.8 8.3E-09 2.8E-13 110.7 9.6 83 137-219 224-332 (497)
160 2he4_A Na(+)/H(+) exchange reg 98.8 3.7E-09 1.3E-13 87.0 5.3 60 352-423 27-89 (90)
161 2vwr_A Ligand of NUMB protein 98.8 5.2E-09 1.8E-13 87.0 6.0 62 352-423 28-91 (95)
162 3hrz_D Complement factor B; se 98.8 1.9E-08 6.6E-13 113.2 12.4 192 130-321 459-733 (741)
163 2pa1_A PDZ and LIM domain prot 98.8 4E-09 1.4E-13 86.2 4.7 59 352-422 25-86 (87)
164 3rle_A Golgi reassembly-stacki 98.8 6.6E-09 2.3E-13 99.4 6.9 84 327-430 94-181 (209)
165 1uez_A KIAA1526 protein; PDZ d 98.8 3.8E-09 1.3E-13 88.9 4.2 73 329-423 22-95 (101)
166 1vb7_A PDZ and LIM domain 2; P 98.8 2E-09 6.9E-14 89.5 2.5 61 352-424 29-92 (94)
167 3tsv_A Tight junction protein 98.8 5.2E-09 1.8E-13 91.8 5.3 62 352-423 50-114 (124)
168 2v90_A PDZ domain-containing p 98.8 1.2E-09 4.2E-14 91.0 1.1 62 352-425 29-93 (96)
169 2iwq_A Multiple PDZ domain pro 98.8 5E-09 1.7E-13 91.8 5.0 82 327-422 35-120 (123)
170 2h2b_A Tight junction protein 98.8 1.2E-08 3.9E-13 86.8 6.9 62 352-423 38-99 (107)
171 2edz_A PDZ domain-containing p 98.8 5.4E-10 1.9E-14 96.4 -1.4 67 352-430 37-106 (114)
172 1uf1_A KIAA1526 protein; PDZ d 98.8 2.4E-09 8.1E-14 94.3 2.6 70 353-433 46-116 (128)
173 1m5z_A GRIP, AMPA receptor int 98.8 1.4E-08 4.9E-13 83.5 7.2 59 352-420 31-90 (91)
174 1ihj_A INAD; intermolecular di 98.8 6.5E-09 2.2E-13 86.9 5.1 61 352-422 36-98 (98)
175 1wf7_A Enigma homologue protei 98.7 1.5E-09 5.3E-14 91.7 1.3 69 352-430 28-97 (103)
176 2jxo_A Ezrin-radixin-moesin-bi 98.7 1.8E-09 6E-14 90.4 1.5 61 352-423 32-95 (98)
177 2yub_A LIMK-2, LIM domain kina 98.7 1.8E-09 6.3E-14 93.9 1.5 63 351-425 42-109 (118)
178 1b8q_A Protein (neuronal nitri 98.7 2.1E-09 7.3E-14 94.4 1.9 82 328-432 20-105 (127)
179 4amh_A Disks large homolog 1; 98.7 1.3E-08 4.5E-13 86.6 6.2 70 352-431 31-103 (106)
180 1v5l_A PDZ and LIM domain 3; a 98.7 3.3E-09 1.1E-13 89.7 2.3 74 327-423 14-90 (103)
181 2jil_A GRIP1 protein, glutamat 98.7 3.9E-09 1.3E-13 88.0 2.6 61 352-424 31-95 (97)
182 2koj_A Partitioning defective 98.7 1.8E-08 6.3E-13 86.1 6.8 77 329-423 23-103 (111)
183 2hga_A Conserved protein MTH13 98.7 1.3E-08 4.5E-13 89.4 6.0 68 351-432 23-90 (125)
184 2awx_A Synapse associated prot 98.7 1.1E-08 3.8E-13 86.7 5.4 70 352-431 32-103 (105)
185 1yph_C Chymotrypsin A, chain B 98.7 1.1E-07 3.8E-12 83.6 11.7 102 132-234 5-128 (131)
186 2uzc_A Human pdlim5, PDZ and L 98.7 1.1E-08 3.8E-13 83.6 4.7 61 352-422 26-87 (88)
187 1um1_A KIAA1849 protein, RSGI 98.7 3E-09 1E-13 91.0 1.2 69 352-430 35-105 (110)
188 3ngh_A PDZ domain-containing p 98.7 7.2E-09 2.5E-13 87.9 3.4 61 352-424 25-88 (106)
189 2qg1_A Multiple PDZ domain pro 98.7 2.2E-08 7.5E-13 82.6 5.7 61 352-422 28-90 (92)
190 1rgw_A ZAsp protein; PDZ, cyph 98.6 1.4E-08 4.8E-13 82.4 4.0 61 352-422 24-85 (85)
191 1x5n_A Harmonin; PDZ domain, u 98.6 6.2E-09 2.1E-13 89.6 1.9 77 329-427 28-106 (114)
192 2d90_A PDZ domain containing p 98.6 2.1E-08 7E-13 84.5 5.0 60 352-423 29-91 (102)
193 2f5y_A Regulator of G-protein 98.6 4.3E-08 1.5E-12 80.8 6.9 62 353-424 24-86 (91)
194 2i04_A Membrane-associated gua 98.6 2.8E-08 9.5E-13 80.7 5.6 60 352-419 24-85 (85)
195 2q3g_A PDZ and LIM domain prot 98.6 2.2E-08 7.5E-13 82.1 4.9 62 352-423 26-88 (89)
196 2qbw_A PDZ-fibronectin fusion 98.6 6.9E-08 2.3E-12 90.7 9.0 73 351-433 22-97 (195)
197 1n7e_A AMPA receptor interacti 98.6 4.5E-08 1.5E-12 81.6 6.9 61 353-423 30-92 (97)
198 3axa_A Afadin, nectin-3, prote 98.6 4.6E-08 1.6E-12 82.9 6.9 63 351-423 36-100 (106)
199 2kom_A Partitioning defective 98.6 2.6E-08 9E-13 86.8 5.4 61 352-422 57-121 (121)
200 1nf3_C PAR-6B; semi-CRIB motif 98.6 5.8E-09 2E-13 91.9 1.1 80 329-422 43-126 (128)
201 2eeg_A PDZ and LIM domain prot 98.6 1.5E-08 5.3E-13 84.0 3.6 61 352-422 31-92 (94)
202 3i4w_A Disks large homolog 4; 98.6 3.4E-08 1.2E-12 83.3 5.8 60 353-422 35-96 (104)
203 3r68_A Na(+)/H(+) exchange reg 98.6 3.5E-08 1.2E-12 81.8 5.7 60 353-424 29-91 (95)
204 2opg_A Multiple PDZ domain pro 98.6 2.9E-08 1E-12 82.8 5.2 63 353-425 30-94 (98)
205 1ueq_A Membrane associated gua 98.6 3.5E-08 1.2E-12 86.2 5.9 61 352-422 43-107 (123)
206 2odp_A Complement C2; C3/C5 co 98.6 2.1E-08 7.3E-13 108.0 5.5 158 137-294 233-458 (509)
207 3khf_A Microtubule-associated 98.6 1.4E-08 4.9E-13 84.9 3.2 61 353-423 34-95 (99)
208 2qkv_A Inactivation-NO-after-p 98.6 4.5E-08 1.5E-12 81.6 6.2 59 353-421 31-91 (96)
209 2r4h_A Membrane-associated gua 98.6 4.4E-08 1.5E-12 84.1 6.2 62 352-423 48-111 (112)
210 1wi2_A Riken cDNA 2700099C19; 98.6 2.4E-08 8.4E-13 84.5 4.5 71 328-422 27-100 (104)
211 2fe5_A Presynaptic protein SAP 98.6 3.7E-08 1.3E-12 81.4 5.5 61 352-422 32-94 (94)
212 1tp5_A Presynaptic density pro 98.6 4.2E-08 1.4E-12 85.0 6.0 60 353-422 38-99 (119)
213 1mfg_A ERB-B2 interacting prot 98.6 5.7E-08 1.9E-12 80.6 6.2 61 351-421 33-93 (95)
214 2la8_A Inactivation-NO-after-p 98.6 4.5E-08 1.5E-12 83.4 5.6 60 352-421 24-85 (106)
215 2g5m_B Neurabin-2; spinophilin 98.6 6.4E-09 2.2E-13 89.3 0.2 69 351-429 33-103 (113)
216 2iwn_A Multiple PDZ domain pro 98.6 7.1E-08 2.4E-12 80.0 6.5 80 327-423 14-95 (97)
217 2i1n_A Discs, large homolog 3; 98.6 2E-08 6.8E-13 84.5 3.1 63 352-424 33-97 (102)
218 2q9v_A Membrane-associated gua 98.6 2.9E-08 9.9E-13 81.5 3.9 62 352-421 26-89 (90)
219 2jre_A C60-1 PDZ domain peptid 98.6 1.7E-08 5.7E-13 86.0 2.5 62 352-423 43-106 (108)
220 2o2t_A Multiple PDZ domain pro 98.6 5.3E-09 1.8E-13 90.5 -0.7 62 352-425 48-114 (117)
221 2jik_A Synaptojanin-2 binding 98.6 5.8E-08 2E-12 81.5 5.6 61 352-422 36-98 (101)
222 2yt7_A Amyloid beta A4 precurs 98.6 5.9E-08 2E-12 81.6 5.5 74 328-420 21-98 (101)
223 1wif_A RSGI RUH-020, riken cDN 98.6 2.6E-08 8.9E-13 87.6 3.4 58 353-420 49-110 (126)
224 1d5g_A Human phosphatase HPTP1 98.6 1E-07 3.5E-12 79.1 6.8 61 352-422 32-94 (96)
225 2ejy_A 55 kDa erythrocyte memb 98.6 4.5E-08 1.5E-12 82.1 4.6 57 353-421 36-96 (97)
226 1uep_A Membrane associated gua 98.6 2E-08 6.8E-13 84.9 2.4 61 352-422 33-97 (103)
227 2ego_A General receptor for ph 98.5 7.2E-08 2.4E-12 80.3 5.6 57 352-420 36-95 (96)
228 1g9o_A NHE-RF; PDZ domain, com 98.5 4.5E-08 1.5E-12 80.5 4.2 62 352-422 26-88 (91)
229 3mmg_A Nuclear inclusion prote 98.5 4.4E-06 1.5E-10 80.2 18.3 172 118-318 11-194 (241)
230 1v5q_A GRIP1 homolog, glutamat 98.5 2.8E-08 9.6E-13 86.7 2.8 61 353-423 45-109 (122)
231 2kjd_A Sodium/hydrogen exchang 98.5 2.4E-08 8.1E-13 87.7 2.3 69 352-431 32-105 (128)
232 1ujv_A Membrane associated gua 98.5 1.5E-07 5.2E-12 78.5 6.9 59 353-423 32-93 (96)
233 1q7x_A PDZ2B domain of PTP-BAS 98.5 9E-08 3.1E-12 81.4 5.5 62 352-423 41-104 (108)
234 2dmz_A INAD-like protein; PDZ 98.5 3.7E-08 1.3E-12 86.6 3.1 80 328-425 27-110 (129)
235 2fne_A Multiple PDZ domain pro 98.5 5.6E-08 1.9E-12 84.2 4.2 62 352-423 52-115 (117)
236 2e7k_A Maguk P55 subfamily mem 98.5 5E-08 1.7E-12 80.6 3.6 68 328-421 18-88 (91)
237 1va8_A Maguk P55 subfamily mem 98.5 5.5E-08 1.9E-12 83.6 3.6 60 352-423 47-110 (113)
238 2djt_A Unnamed protein product 98.5 7.6E-08 2.6E-12 81.2 4.4 62 352-423 37-100 (104)
239 1kwa_A Hcask/LIN-2 protein; PD 98.5 8.3E-08 2.8E-12 78.7 4.5 58 353-422 25-86 (88)
240 1wfg_A Regulating synaptic mem 98.5 8.6E-08 3E-12 84.8 4.9 61 352-422 64-128 (131)
241 1wfv_A Membrane associated gua 98.5 4.4E-08 1.5E-12 82.4 2.7 62 352-423 35-98 (103)
242 2vsv_A Rhophilin-2; scaffold p 98.5 8.9E-08 3.1E-12 82.0 4.5 60 353-423 44-106 (109)
243 2iwo_A Multiple PDZ domain pro 98.5 2.7E-08 9.3E-13 86.7 1.3 64 352-425 52-117 (120)
244 2kv8_A RGS12, regulator of G-p 98.5 6.6E-08 2.2E-12 78.1 3.2 57 353-421 23-82 (83)
245 2byg_A Channel associated prot 98.5 1.4E-07 4.9E-12 81.6 5.6 61 352-422 53-115 (117)
246 1wf8_A Neurabin-I; PDZ domain, 98.5 8.7E-08 3E-12 81.4 4.1 61 352-422 39-101 (107)
247 1n7t_A 99-MER peptide of densi 98.5 1.2E-07 4.1E-12 79.9 4.7 61 351-421 41-101 (103)
248 2dlu_A INAD-like protein; PDZ 98.4 1.7E-07 5.9E-12 80.1 5.7 61 353-423 38-100 (111)
249 1ujd_A KIAA0559 protein; PDZ d 98.4 1.1E-07 3.9E-12 82.1 4.1 62 352-423 48-111 (117)
250 2kpk_A Membrane-associated gua 98.4 2.2E-07 7.4E-12 81.9 5.7 61 352-422 42-106 (129)
251 2eno_A Synaptojanin-2-binding 98.4 1.2E-07 4.2E-12 82.3 4.1 62 352-423 46-109 (120)
252 3cbz_A Dishevelled-2; PDZ doma 98.4 1.1E-07 3.7E-12 81.1 3.6 62 352-423 32-98 (108)
253 2eei_A PDZ domain-containing p 98.4 8.9E-08 3E-12 81.1 3.0 62 352-423 31-93 (106)
254 1qav_A Alpha-1 syntrophin (res 98.4 3.3E-07 1.1E-11 75.1 6.4 59 352-420 29-89 (90)
255 1wha_A KIAA0147 protein, scrib 98.4 9.2E-08 3.1E-12 81.0 3.0 61 352-422 37-99 (105)
256 2edv_A FERM and PDZ domain-con 98.4 7.5E-08 2.6E-12 80.3 2.4 59 353-421 31-89 (96)
257 2db5_A INAD-like protein; PDZ 98.4 1.4E-07 4.8E-12 82.8 4.2 59 352-422 53-116 (128)
258 2dkr_A LIN-7 homolog B; LIN-7B 98.4 1.8E-07 6.1E-12 77.1 4.6 61 352-422 29-91 (93)
259 3suz_A Amyloid beta A4 precurs 98.4 8E-08 2.7E-12 100.4 2.9 113 353-495 232-348 (388)
260 1y7n_A Amyloid beta A4 precurs 98.4 9.2E-08 3.1E-12 79.0 2.7 64 343-420 23-89 (90)
261 3o46_A Maguk P55 subfamily mem 98.4 2.3E-07 8E-12 76.6 4.9 60 352-423 27-90 (93)
262 2daz_A INAD-like protein; PDZ 98.4 1.7E-07 5.9E-12 81.8 4.2 62 352-423 50-113 (124)
263 1q3o_A Shank1; PDZ, GKAP, pept 98.4 2.5E-07 8.7E-12 78.8 5.1 58 352-421 44-104 (109)
264 1v62_A KIAA1719 protein; struc 98.4 8.5E-08 2.9E-12 83.0 1.9 59 353-423 42-104 (117)
265 3qik_A Phosphatidylinositol 3, 98.4 1.5E-07 5.2E-12 79.0 3.2 57 352-418 38-98 (101)
266 1wg6_A Hypothetical protein (r 98.4 1.5E-07 5.1E-12 82.7 3.1 62 352-423 54-124 (127)
267 4a8c_A Periplasmic PH-dependen 98.4 4.8E-07 1.6E-11 95.9 7.6 69 353-433 363-432 (436)
268 3qe1_A Sorting nexin-27, G pro 98.3 1.5E-07 5.3E-12 79.7 2.7 59 353-423 43-104 (107)
269 2dm8_A INAD-like protein; PDZ 98.3 2.2E-07 7.4E-12 80.0 3.5 62 353-424 43-106 (116)
270 2csj_A TJP2 protein; PDZ domai 98.3 2.2E-07 7.6E-12 80.2 3.4 62 352-423 45-106 (117)
271 2ehr_A INAD-like protein; PDZ 98.3 3.6E-07 1.2E-11 78.9 4.7 61 352-422 49-111 (117)
272 2yuy_A RHO GTPase activating p 98.3 4.6E-08 1.6E-12 85.8 -1.1 59 352-422 60-121 (126)
273 1whd_A RGS3, regulator of G-pr 98.3 2.1E-07 7.1E-12 78.1 3.0 58 353-422 36-96 (100)
274 2xkx_A Disks large homolog 4; 98.3 1.6E-06 5.4E-11 97.6 10.8 121 352-497 88-220 (721)
275 1vae_A Rhophilin 2, rhophilin, 98.3 1.7E-07 5.9E-12 80.4 2.2 56 353-419 36-94 (111)
276 2edp_A Fragment, shroom family 98.3 3.4E-07 1.2E-11 76.8 4.0 60 353-423 35-96 (100)
277 1x6d_A Interleukin-16; PDZ dom 98.3 9E-08 3.1E-12 82.9 0.4 65 352-425 41-107 (119)
278 3pv2_A DEGQ; trypsin fold, PDZ 98.3 3.6E-07 1.2E-11 97.3 5.2 64 353-428 386-450 (451)
279 3nfk_A Tyrosine-protein phosph 98.3 4.9E-07 1.7E-11 76.6 4.9 60 353-420 43-107 (107)
280 1um7_A Synapse-associated prot 98.3 2E-07 7E-12 79.7 2.5 61 352-422 38-100 (113)
281 1uhp_A Hypothetical protein KI 98.3 5.1E-07 1.8E-11 76.6 4.9 61 352-422 40-102 (107)
282 2gzv_A PRKCA-binding protein; 98.3 6.3E-07 2.1E-11 77.2 5.3 69 328-419 36-108 (114)
283 3kzd_A TIAM-1, T-lymphoma inva 98.3 8.5E-07 2.9E-11 73.7 5.8 50 328-387 20-70 (94)
284 3l4f_D SH3 and multiple ankyri 98.3 5.5E-07 1.9E-11 79.7 5.0 62 352-423 64-126 (132)
285 1uew_A Membrane associated gua 98.3 3.3E-07 1.1E-11 78.7 3.4 58 354-423 44-105 (114)
286 3k1r_A Harmonin; protein-prote 98.3 4.4E-07 1.5E-11 85.4 4.5 59 352-423 109-170 (192)
287 1wi4_A Synip, syntaxin binding 98.3 2.2E-07 7.6E-12 79.4 2.2 60 353-422 41-106 (109)
288 3gsl_A Disks large homolog 4; 98.3 3.1E-07 1.1E-11 85.8 3.4 62 352-425 129-194 (196)
289 3b76_A E3 ubiquitin-protein li 98.3 6.2E-07 2.1E-11 77.8 5.0 60 352-421 52-113 (118)
290 3tsz_A Tight junction protein 98.3 4.2E-07 1.4E-11 95.0 4.5 62 352-423 30-94 (391)
291 2d8i_A T-cell lymphoma invasio 98.3 5.3E-07 1.8E-11 77.7 4.2 68 330-421 31-101 (114)
292 2qt5_A Glutamate receptor-inte 98.3 4E-07 1.4E-11 85.9 3.6 62 352-425 134-199 (200)
293 1fc6_A Photosystem II D1 prote 98.2 1.6E-06 5.4E-11 90.6 8.0 69 352-431 98-172 (388)
294 2krg_A Na(+)/H(+) exchange reg 98.2 3.9E-08 1.3E-12 94.5 -4.2 68 352-431 32-105 (216)
295 1uju_A Scribble; PDZ domain, c 98.2 2.2E-07 7.5E-12 79.4 0.7 61 352-422 43-105 (111)
296 2d92_A INAD-like protein; PDZ 98.2 5.7E-07 1.9E-11 76.5 3.1 58 352-420 43-104 (108)
297 3soe_A Membrane-associated gua 98.2 3.2E-06 1.1E-10 72.6 7.8 61 353-425 34-97 (113)
298 3hpk_A Protein interacting wit 98.2 1.7E-06 6E-11 75.4 6.0 58 352-419 44-103 (125)
299 2dc2_A GOPC, golgi associated 98.2 1.9E-06 6.5E-11 72.6 5.9 61 353-423 35-97 (103)
300 2pka_B Kallikrein A; serine pr 98.2 9.8E-06 3.3E-10 73.0 10.9 124 194-318 6-147 (152)
301 3e17_A Tight junction protein 98.2 8.4E-07 2.9E-11 72.6 3.4 56 353-420 21-80 (88)
302 3shw_A Tight junction protein 98.2 9.4E-07 3.2E-11 94.0 4.4 62 352-423 22-86 (468)
303 4e34_A Golgi-associated PDZ an 98.1 1.7E-06 5.9E-11 70.2 4.8 57 353-419 28-86 (87)
304 3egg_C Spinophilin; PP1, serin 98.1 2.2E-06 7.5E-11 79.2 5.3 59 352-420 110-170 (170)
305 1i16_A Interleukin 16, LCF; cy 98.1 1.7E-06 5.9E-11 76.2 4.3 63 352-423 56-120 (130)
306 1v6b_A Harmonin isoform A1; st 98.1 5.6E-07 1.9E-11 78.0 1.0 57 354-420 44-106 (118)
307 3r0h_A INAD, inactivation-NO-a 98.1 3.3E-06 1.1E-10 79.7 6.2 59 352-420 135-195 (206)
308 2z17_A Pleckstrin homology SEC 98.1 8.6E-07 2.9E-11 74.8 1.6 54 352-417 47-103 (104)
309 2cs5_A Tyrosine-protein phosph 98.1 9.6E-07 3.3E-11 76.4 1.9 63 353-423 41-108 (119)
310 1p1d_A PDZ45, glutamate recept 98.1 1.3E-06 4.4E-11 82.2 2.9 58 352-421 134-195 (196)
311 3k50_A Putative S41 protease; 98.1 3.1E-06 1.1E-10 88.7 5.9 57 354-423 91-148 (403)
312 2xkx_A Disks large homolog 4; 98.0 2.1E-05 7.1E-10 88.5 12.6 64 352-425 183-248 (721)
313 1ufx_A KIAA1526 protein; PDZ d 97.9 2.3E-06 8E-11 72.2 1.7 59 354-422 33-98 (103)
314 1lvm_A Catalytic domain of the 97.9 0.0006 2.1E-08 65.0 18.3 171 118-319 19-202 (229)
315 1r6j_A Syntenin 1; PDZ, membra 97.9 8.8E-06 3E-10 65.8 4.9 53 357-419 27-80 (82)
316 1ky9_A Protease DO, DEGP, HTRA 97.9 1.6E-06 5.5E-11 92.2 0.0 65 352-428 382-447 (448)
317 1z87_A Alpha-1-syntrophin; pro 97.9 4.6E-06 1.6E-10 82.2 3.1 62 352-423 102-165 (263)
318 3qzr_A 3C protein; chymotrypsi 97.9 0.0015 5.2E-08 60.5 19.6 147 149-308 27-178 (187)
319 2lob_A Golgi-associated PDZ an 97.1 2E-06 6.9E-11 73.8 0.0 54 353-418 53-110 (112)
320 1k32_A Tricorn protease; prote 97.8 4.4E-05 1.5E-09 89.0 9.9 67 352-430 747-825 (1045)
321 3gge_A PDZ domain-containing p 97.8 5.1E-05 1.7E-09 62.9 7.0 60 353-420 28-89 (95)
322 3q3y_A HEVB EV93 3C protease; 97.7 0.0027 9.2E-08 58.8 18.8 146 149-307 25-175 (191)
323 2b0f_A Picornain 3C (protease 97.7 0.0025 8.4E-08 59.0 18.1 144 151-308 25-173 (182)
324 1w9e_A Syntenin 1; cell adhesi 97.6 6.5E-06 2.2E-10 75.3 -1.0 32 356-387 110-142 (166)
325 1cqq_A Type 2 rhinovirus 3C pr 97.5 0.0046 1.6E-07 57.2 17.7 146 149-307 23-173 (180)
326 4dcd_A Protease 3C, genome pol 97.5 0.0067 2.3E-07 56.3 18.6 146 149-307 30-180 (190)
327 3zve_A 3C protease; hydrolase, 97.5 0.005 1.7E-07 57.5 17.7 146 149-308 23-174 (190)
328 4fln_A Protease DO-like 2, chl 97.4 0.00024 8.4E-09 76.7 8.0 83 328-423 374-474 (539)
329 2pka_A Kallikrein A; serine pr 97.3 0.00041 1.4E-08 55.1 6.7 45 132-178 5-51 (80)
330 2hal_A Hepatitis A protease 3C 97.3 0.0068 2.3E-07 57.6 15.9 164 124-308 12-204 (212)
331 2bhg_A Foot-and-mouth disease 97.1 0.012 4E-07 55.9 14.7 156 150-315 31-204 (209)
332 2ijd_1 Picornain 3C, RNA-direc 96.7 0.04 1.4E-06 60.9 17.4 138 149-294 23-165 (644)
333 3suz_A Amyloid beta A4 precurs 96.5 0.00044 1.5E-08 72.0 0.0 63 345-421 309-374 (388)
334 1uf1_A KIAA1526 protein; PDZ d 94.7 0.018 6.2E-07 49.8 3.3 75 407-497 5-81 (128)
335 2ggv_B NS3, non-structural pro 92.8 0.17 5.8E-06 45.8 6.0 131 123-292 19-151 (185)
336 2fp7_B Serine protease NS3; fl 92.7 0.18 6E-06 45.3 6.0 114 149-290 20-135 (172)
337 1yph_E Chymotrypsin A, chain C 92.7 0.17 5.8E-06 41.3 5.6 50 269-318 41-93 (97)
338 2fom_B Polyprotein; flavivirus 92.6 0.2 6.9E-06 45.5 6.2 130 122-290 19-150 (185)
339 3e90_B NS3 protease; trypsin-l 92.4 0.27 9.2E-06 44.9 6.9 129 123-290 24-154 (198)
340 3u1j_B Serine protease NS3; se 92.3 0.3 1E-05 44.4 7.0 129 123-290 29-159 (191)
341 3lkw_A Fusion protein of nonst 91.6 0.36 1.2E-05 45.2 6.9 113 150-290 86-200 (236)
342 3su6_A NS3 protease, NS4A prot 89.7 0.28 9.6E-06 44.5 4.2 44 269-312 154-197 (203)
343 2yew_A Capsid protein, coat pr 88.1 0.28 9.4E-06 45.8 3.1 26 269-294 199-224 (253)
344 4ash_A NS6 protease; hydrolase 87.8 3.1 0.00011 36.6 9.3 135 149-294 15-163 (185)
345 1ep5_B Capsid protein C, coat 87.7 0.31 1.1E-05 41.7 2.9 28 267-294 100-127 (157)
346 1vcp_A Semliki forest virus ca 87.4 0.35 1.2E-05 41.0 3.0 27 268-294 94-120 (149)
347 1wxr_A Haemoglobin protease; h 87.3 1.4 4.7E-05 50.6 8.7 63 149-219 56-121 (1048)
348 1svp_A Sindbis virus capsid pr 86.9 0.38 1.3E-05 41.4 3.0 26 269-294 104-129 (161)
349 1kxf_A Sindbis virus capsid pr 86.8 0.34 1.2E-05 45.6 2.9 26 269-294 209-234 (264)
350 4agk_A Capsid protein, coat pr 86.7 0.42 1.4E-05 41.0 3.1 28 267-294 101-128 (158)
351 2fyq_A Chymotrypsin-like cyste 81.6 5.7 0.00019 35.1 8.2 136 149-295 26-175 (194)
352 3dor_A Protein CT_858, CPAF; m 55.0 43 0.0015 36.1 9.5 77 355-434 98-188 (583)
353 1x5n_A Harmonin; PDZ domain, u 48.0 21 0.00073 29.1 4.7 45 453-497 30-76 (114)
354 4hcz_A PHD finger protein 1; p 46.2 60 0.002 23.8 6.1 39 168-207 4-42 (58)
355 2hrv_A 2A cysteine proteinase; 40.0 83 0.0028 27.3 7.2 30 263-293 94-123 (142)
356 2qkv_A Inactivation-NO-after-p 35.8 36 0.0012 26.9 4.1 37 466-502 33-72 (96)
357 2o8m_A Protease; NS3, NS4A, vi 34.8 41 0.0014 30.9 4.6 42 271-313 146-188 (200)
358 1wfg_A Regulating synaptic mem 34.1 1.7E+02 0.0058 24.4 8.4 85 409-496 12-100 (131)
359 2vwr_A Ligand of NUMB protein 33.9 1.3E+02 0.0044 23.2 7.2 48 453-501 19-69 (95)
360 2eqj_A Metal-response element- 30.9 1.3E+02 0.0046 22.5 6.1 37 169-206 15-51 (66)
361 2la8_A Inactivation-NO-after-p 30.0 45 0.0016 27.0 3.9 39 465-503 26-67 (106)
362 1i4k_A Putative snRNP SM-like 29.9 1.4E+02 0.0048 22.5 6.5 33 172-205 15-47 (77)
363 2jvf_A De novo protein M7; tet 29.8 57 0.0019 24.8 3.9 23 412-434 7-29 (96)
364 1z8r_A Coxsackievirus B4 polyp 29.8 61 0.0021 28.8 4.8 30 263-293 114-143 (166)
365 4e34_A Golgi-associated PDZ an 29.2 79 0.0027 24.0 5.0 36 466-501 30-68 (87)
366 2eeh_A PDZ domain-containing p 28.8 58 0.002 25.7 4.3 45 453-497 25-71 (100)
367 1h64_1 SnRNP SM-like protein; 28.5 88 0.003 23.6 5.1 33 172-205 15-47 (75)
368 1d3b_B Protein (small nuclear 28.0 82 0.0028 24.8 5.0 33 172-205 15-47 (91)
369 3s6n_G Small nuclear ribonucle 28.0 97 0.0033 23.5 5.2 34 172-206 15-48 (76)
370 3nfk_A Tyrosine-protein phosph 28.0 83 0.0028 25.0 5.2 38 465-502 44-85 (107)
371 1uez_A KIAA1526 protein; PDZ d 27.6 51 0.0017 26.0 3.7 48 453-500 24-73 (101)
372 1wh1_A KIAA1095 protein; PDZ d 27.4 85 0.0029 25.9 5.3 49 453-501 35-88 (124)
373 1th7_A SnRNP-2, small nuclear 27.2 95 0.0032 23.9 5.1 34 172-206 20-53 (81)
374 2pa1_A PDZ and LIM domain prot 26.0 1.2E+02 0.0041 22.9 5.6 32 465-496 27-60 (87)
375 1qav_A Alpha-1 syntrophin (res 25.8 96 0.0033 23.7 5.0 33 465-497 31-66 (90)
376 1wi2_A Riken cDNA 2700099C19; 25.8 80 0.0027 25.1 4.6 44 453-496 30-75 (104)
377 2q3g_A PDZ and LIM domain prot 25.7 1.2E+02 0.0041 23.1 5.5 33 465-497 28-62 (89)
378 1mgq_A SM-like protein; LSM, R 25.6 1.1E+02 0.0036 23.8 5.1 33 172-205 26-58 (83)
379 1d3b_A Protein (small nuclear 25.1 1.2E+02 0.0043 22.9 5.3 33 172-205 16-48 (75)
380 1y96_A Gemin6, SIP2, GEM-assoc 24.6 1.8E+02 0.0062 23.0 6.2 32 172-204 18-50 (86)
381 1i8f_A Putative snRNP SM-like 24.0 1.5E+02 0.005 22.8 5.7 33 172-205 22-54 (81)
382 4emg_A Probable U6 snRNA-assoc 23.8 1.2E+02 0.0039 24.2 5.1 33 172-205 20-52 (93)
383 1ljo_A Archaeal SM-like protei 23.4 1.3E+02 0.0046 22.7 5.3 33 172-205 16-49 (77)
384 4emk_C U6 snRNA-associated SM- 22.2 1.3E+02 0.0043 25.0 5.2 33 172-205 34-66 (113)
385 2m0o_A PHD finger protein 1; t 22.1 90 0.0031 24.2 3.8 36 171-207 30-65 (79)
386 1b34_B Protein (small nuclear 22.1 1.2E+02 0.0042 25.2 5.2 34 171-205 39-72 (118)
387 2pkt_A PDZ and LIM domain prot 22.1 1.3E+02 0.0044 23.0 5.1 34 465-498 28-63 (91)
388 4esy_A CBS domain containing m 22.1 38 0.0013 29.4 2.0 22 272-293 47-68 (170)
389 2i6v_A General secretion pathw 22.0 55 0.0019 25.2 2.8 28 476-503 33-60 (87)
390 4emk_B U6 snRNA-associated SM- 21.9 1E+02 0.0035 23.3 4.3 32 172-204 15-46 (75)
391 4emk_A U6 snRNA-associated SM- 21.4 1.4E+02 0.0046 24.0 5.1 33 172-205 31-63 (94)
392 4a4f_A SurviVal of motor neuro 21.4 2.4E+02 0.0081 20.5 6.1 35 171-205 12-46 (64)
393 3kzd_A TIAM-1, T-lymphoma inva 21.4 1.6E+02 0.0054 23.5 5.5 44 453-496 23-69 (94)
394 3bw1_A SMX4 protein, U6 snRNA- 21.3 1.1E+02 0.0039 24.4 4.6 33 172-205 21-53 (96)
395 2uzc_A Human pdlim5, PDZ and L 21.2 1.5E+02 0.0052 22.3 5.3 33 465-497 28-62 (88)
396 2e5p_A Protein PHF1, PHD finge 20.8 2.5E+02 0.0084 21.1 5.8 37 169-206 11-47 (68)
397 3s6n_F Small nuclear ribonucle 20.3 3.1E+02 0.01 21.3 7.4 61 172-235 17-77 (86)
398 1b34_A Protein (small nuclear 20.3 2.5E+02 0.0086 23.3 6.8 61 172-235 13-73 (119)
No 1
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=100.00 E-value=8.9e-63 Score=532.70 Aligned_cols=383 Identities=51% Similarity=0.907 Sum_probs=345.9
Q ss_pred cCCCeEEEEeeeeCCCCCCccccCCCcceEEEEEEEeCCEEEecccccCCCCeEEEEEcCCCcEEEEEEEEeccCCCeEE
Q 009784 121 AMDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIGTECDIAM 200 (526)
Q Consensus 121 ~~~SVV~I~~~~~~~~~~~P~~~~~~~~~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~~g~~~~a~vv~~d~~~DlAl 200 (526)
.++|||+|++....+++..||+...+..+.||||+|++||||||+|||+++..+.|++.+|++.|+|++++.|+.+||||
T Consensus 46 ~~~sVV~I~~~~~~~~~~~Pw~~~~~~~s~GSGfiI~dG~IlTN~HVV~~a~~i~V~~~~dg~~~~A~vv~~D~~~DLAv 125 (539)
T 4fln_A 46 FLNAVVKVYCTHTAPDYSLPWQKQRQFTSTGSAFMIGDGKLLTNAHCVEHDTQVKVKRRGDDRKYVAKVLVRGVDCDIAL 125 (539)
T ss_dssp HHTTEEEEEEEECCBCSSSTTSBCCCEEEEEEEEEEETTEEEECGGGGTTEEEEEEECTTCCCCEEEEEEEEETTTTEEE
T ss_pred cCCCeEEEEEEecCCCCCCccccCCccceEEEEEEEECCEEEEChHHcCCCCeEEEEEccCCEEEEEEEEEECCCCCEEE
Confidence 45699999999999999999999999999999999999999999999999999999997789999999999999999999
Q ss_pred EEecccccccCceeeecCCCCcCCCcEEEEeeCCCCCceeEEEEEEeceeeeeccCCceeeeEEEEcccCCCCCCCCeee
Q 009784 201 LTVEDDEFWEGVLPVEFGELPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAF 280 (526)
Q Consensus 201 Lkv~~~~~~~~~~pl~l~~~~~~g~~V~~iG~p~~~~~~sv~~GiVs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlv 280 (526)
||++...+...+.++.+++++++|++|+++|||+++...+++.|+||++++..+..+.....+||+|+++++||||||||
T Consensus 126 Lkv~~~~~~~~~~pl~~g~~~~vGd~V~aiG~P~g~~~~tvT~GIVSa~~r~~~~~~~~~~~~IQtDAaInpGnSGGPLv 205 (539)
T 4fln_A 126 LSVESEDFWKGAEPLRLGHLPRLQDSVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSDLLGIQIDAAINPGNSGGPAF 205 (539)
T ss_dssp EEECCSSSSTTCCCCCBCCCCCTTCEEEEEECCSSSCCCEEEEEEEEEEEEEECTTSCCEEEEEEESSCCCTTTTTSEEE
T ss_pred EEEeCCcCCcCCceeecCCcCcCCCeEEEEEcCCCCCCCcEEeEEECcccccccCCCCcceeEEEEEeEecCCCccchhc
Confidence 99998776667788999999999999999999998876689999999998877766666667899999999999999999
Q ss_pred cCCCeEEEEEeeccccCccccccccccHHHHHHHHHHHHHcCceeeccccCceeeeccChhHHhhhcCCCCccceEEEEe
Q 009784 281 NDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEKNGAYTGFPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRV 360 (526)
Q Consensus 281 n~~G~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~g~~~~~~~LGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V 360 (526)
|.+|+||||+++.+...+..++|||||++.+++++++|+++|++.+|+|||+.++.+.++++++.+|++ ...|++|.+|
T Consensus 206 n~~GeVIGIntai~~~~~~~gigfAIP~~~v~~vl~~l~~~G~~~~r~~LGv~~~~~~~~~~~~~~~l~-~~~Gv~V~~V 284 (539)
T 4fln_A 206 NDQGECIGVAFQVYRSEETENIGYVIPTTVVSHFLTDYERNGKYTGYPCLGVLLQKLENPALRECLKVP-TNEGVLVRRV 284 (539)
T ss_dssp CSSSCEEEEECCCC-----CCCEEEEEHHHHHHHHHHHHTTTSCCCCCBCCEEEEECCCHHHHHHHTCS-SSBCEEEEEE
T ss_pred cCCCcEEEEEEEEecCCCCCcceecccHHHHHHHHHHHHHcCeEEeeeecceEEEecCCHHHHHhcCCC-CcCceeeecc
Confidence 999999999999886666789999999999999999999999998899999999998889999999998 4589999999
Q ss_pred CCCCcccCCCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEEEEEEEEecccccccCCC
Q 009784 361 DPTAPESEVLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLATHRRLIPSH 440 (526)
Q Consensus 361 ~~~spA~~GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~~~~~v~l~~~~~~~p~~ 440 (526)
.++|||+++||+||+|++|||++|.+.+++.++..+++.|.+++..+++|++|+|+|+|+|++++++|++.+.+...+..
T Consensus 285 ~~~spA~~al~~GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~~~~Gd~v~l~v~R~Gk~~~v~Vtl~~~~~~~~~~ 364 (539)
T 4fln_A 285 EPTSDASKVLKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQKFAGDIAEIGIIRAGEHKKVQVVLRPRVHLVPYH 364 (539)
T ss_dssp CTTSGGGGTCCTTCEEEEETTEECBSSSEEECSTTCEEETHHHHHTSCTTCEEEEEEEETTEEEEEEEECBCCCCSSCSC
T ss_pred cCCChHHhCccCCCEEEEECCEEeCcCCeeccccchhHHHHHHHHcCCCCCEEEEEEEECCEEEEEEEEEccCccccccc
Confidence 99999988999999999999999999999988888899999999999999999999999999999999999999888888
Q ss_pred CCCCCCceEEEeeEEEEecccc---------------------------ceeeeeeeecc--hhhhccccccceeeeecc
Q 009784 441 NKGRPPSYYIIAGFVFSRCLYL---------------------------ISVLSMERIMN--MKLRSSFWTSSCIQCHNC 491 (526)
Q Consensus 441 ~~~~~p~~~i~gG~~f~~lt~~---------------------------~~~~~~~~i~~--~~~~sg~~~~~~~~~~~~ 491 (526)
..+..|+|++++|++|++|+.. ..++.+..+.+ .+.+.|+..+|+|...|.
T Consensus 365 ~~~~~p~~~~~~Gl~f~~Lt~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gVvvs~V~~~s~a~~~g~~~gdiI~~vNg 444 (539)
T 4fln_A 365 IDGGQPSYIIVAGLVFTPLSEPLIEEECEDTIGLKLLTKARYSVARFRGEQIVILSQVLANEVNIGYEDMNNQQVLKFNG 444 (539)
T ss_dssp TTSSCCCCCCSTTEEEEECCHHHHTTSCSSSSCHHHHHHHHHCCCSSTTCCCEEEEEECCCGGGTTCSSCCSEEEEEETT
T ss_pred cccCCCccccccceEEeeCCHHHHHhhcccccCceeeehhhhhhhccCCceEEEEEEecCCchhhhcCCCCCCEEEeECC
Confidence 8889999999999999999821 12344555655 345678899999999999
Q ss_pred cchhhhHHHHHHH
Q 009784 492 QMSSLLWCLRCLW 504 (526)
Q Consensus 492 ~~~~~~~~~~~~~ 504 (526)
+-..++-+|+-++
T Consensus 445 ~~V~s~~~l~~~l 457 (539)
T 4fln_A 445 IPIRNIHHLAHLI 457 (539)
T ss_dssp EECCSHHHHHHHH
T ss_pred EEcCCHHHHHHHH
Confidence 9999999998764
No 2
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=100.00 E-value=2e-50 Score=430.61 Aligned_cols=366 Identities=23% Similarity=0.307 Sum_probs=291.5
Q ss_pred ChhhhhhhcccCCCeEEEEeeeeCCC-------------CCCccccCCCcceEEEEEEEe-C-CEEEecccccCCCCeEE
Q 009784 111 VEPGVARVVPAMDAVVKVFCVHTEPN-------------FSLPWQRKRQYSSSSSGFAIG-G-RRVLTNAHSVEHYTQVK 175 (526)
Q Consensus 111 ~~~~v~~~~~~~~SVV~I~~~~~~~~-------------~~~P~~~~~~~~~~GSGfvI~-~-g~ILT~aHvV~~~~~i~ 175 (526)
+.+.++++.+ |||.|.+...... ..+||.......+.||||+|+ + ||||||+|||.++..+.
T Consensus 15 ~~~~~~~~~p---aVV~I~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~GSGfii~~~~G~IlTn~Hvv~~a~~i~ 91 (436)
T 4a8c_A 15 LAPMLEKVLP---AVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQAQKIS 91 (436)
T ss_pred HHHHHHhhCC---cEEEEEEEEeecccccCcchhhhhcccccccccCCcCceEEEEEEEECCCCEEEECHHHhCCCCEEE
Confidence 4445555555 9999998764321 012443334456899999999 5 89999999999999999
Q ss_pred EEEcCCCcEEEEEEEEeccCCCeEEEEecccccccCceeeecCCC--CcCCCcEEEEeeCCCCCceeEEEEEEeceeeee
Q 009784 176 LKKRGSDTKYLATVLAIGTECDIAMLTVEDDEFWEGVLPVEFGEL--PALQDAVTVVGYPIGGDTISVTSGVVSRIEILS 253 (526)
Q Consensus 176 V~~~~~g~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~pl~l~~~--~~~g~~V~~iG~p~~~~~~sv~~GiVs~~~~~~ 253 (526)
|++. +++.+++++++.|+.+||||||++... .+++++|+++ ...|++|+++|||.+... +++.|+|++..+..
T Consensus 92 V~~~-dg~~~~a~vv~~d~~~DlAllkv~~~~---~l~~~~l~~s~~~~~G~~v~aiG~P~g~~~-~vt~G~vs~~~r~~ 166 (436)
T 4a8c_A 92 IQLN-DGREFDAKLIGSDDQSDIALLQIQNPS---KLTQIAIADSDKLRVGDFAVAVGNPFGLGQ-TATSGIVSALGRSG 166 (436)
T ss_pred EEeC-CCCEEEEEEEEEcCCCCEEEEEecCCC---CCceEeccCcccCCCCCEEEEEEcCCCCCc-cEEEEEEeeecccc
Confidence 9997 899999999999999999999997654 6889999864 367899999999999876 89999999987652
Q ss_pred ccCCceeeeEEEEcccCCCCCCCCeeecCCCeEEEEEeeccccC-ccccccccccHHHHHHHHHHHHHcCceeeccccCc
Q 009784 254 YVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHE-DVENIGYVIPTPVIMHFIQDYEKNGAYTGFPLLGV 332 (526)
Q Consensus 254 ~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VVGI~~~~~~~~-~~~~~~~aIP~~~i~~~l~~l~~~g~~~~~~~LGi 332 (526)
.. ...+..+||+|+++++|||||||+|.+|+||||+++.+... +..+++|+||++.+++++++|.++|++. ++|||+
T Consensus 167 ~~-~~~~~~~iq~da~i~~GnSGGPl~n~~G~vvGI~~~~~~~~~~~~g~gfaIP~~~~~~~~~~l~~~g~v~-r~~lGv 244 (436)
T 4a8c_A 167 LN-LEGLENFIQTDASINRGNAGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIK-RGLLGI 244 (436)
T ss_pred cC-CCCccCEEEEcCccCCCCCcCcccCCCCEEEEEEeeeccCCCCceeEEEEEehHHHHHHHHHHHhccccc-cccCce
Confidence 21 22334589999999999999999999999999999877543 4568999999999999999999999998 999999
Q ss_pred eeeeccChhHHhhhcCCCCccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCC
Q 009784 333 EWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGD 411 (526)
Q Consensus 333 ~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~ 411 (526)
.++.+ ++++++.+|++ ...|++|.+|.++|||++ |||+||+|++|||++|.++.++. ..+....+|+
T Consensus 245 ~~~~~-~~~~a~~~gl~-~~~G~~V~~V~~~spA~~aGL~~GD~I~~vnG~~v~~~~~l~----------~~l~~~~~g~ 312 (436)
T 4a8c_A 245 KGTEM-SADIAKAFNLD-VQRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELR----------SRIATTEPGT 312 (436)
T ss_pred Eeccc-CHHHHHHhCCC-CCcceEEEEECCCChHHHCCCCCCCEEEEECCEECCCHHHHH----------HHHHhcCCCC
Confidence 99999 89999999997 467999999999999999 99999999999999999998875 6666667899
Q ss_pred EEEEEEEECCEEEEEEEEecccccccCCCCCCCCCceEEEeeEEEEecccc--ceeeeeeeecc--hhhhccccccceee
Q 009784 412 SAAVKVLRDSKILNFNITLATHRRLIPSHNKGRPPSYYIIAGFVFSRCLYL--ISVLSMERIMN--MKLRSSFWTSSCIQ 487 (526)
Q Consensus 412 ~v~l~v~R~G~~~~~~v~l~~~~~~~p~~~~~~~p~~~i~gG~~f~~lt~~--~~~~~~~~i~~--~~~~sg~~~~~~~~ 487 (526)
+++|+|+|+|+.+++++++...+...... .. ....+.|..+.+.... ...+.+..+.+ .+.++||+.||.|.
T Consensus 313 ~v~l~v~R~g~~~~~~v~l~~~~~~~~~~---~~-~~~gl~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~ 388 (436)
T 4a8c_A 313 KVKLGLLRNGKPLEVEVTLDTSTSSSASA---EM-ITPALEGATLSDGQLKDGGKGIKIDEVVKGSPAAQAGLQKDDVII 388 (436)
T ss_pred EEEEEEEECCEEEEEEEEECCCCcccccc---cc-cccCceeeecccccccCCCCCEEEEEeCCCCHHHHcCCCCCCEEE
Confidence 99999999999999999998765322110 00 0111223333332211 12344555554 45689999999999
Q ss_pred eecccchhhhHHHHH
Q 009784 488 CHNCQMSSLLWCLRC 502 (526)
Q Consensus 488 ~~~~~~~~~~~~~~~ 502 (526)
..|.+-..+..+++-
T Consensus 389 ~vng~~v~~~~~~~~ 403 (436)
T 4a8c_A 389 GVNRDRVNSIAEMRK 403 (436)
T ss_pred EECCEECCCHHHHHH
Confidence 999987777665543
No 3
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=100.00 E-value=4.3e-50 Score=415.57 Aligned_cols=304 Identities=26% Similarity=0.386 Sum_probs=255.3
Q ss_pred ChhhhhhhcccCCCeEEEEeeeeCCC-------C------CCccccCCCcceEEEEEEEe-C-CEEEecccccCCCCeEE
Q 009784 111 VEPGVARVVPAMDAVVKVFCVHTEPN-------F------SLPWQRKRQYSSSSSGFAIG-G-RRVLTNAHSVEHYTQVK 175 (526)
Q Consensus 111 ~~~~v~~~~~~~~SVV~I~~~~~~~~-------~------~~P~~~~~~~~~~GSGfvI~-~-g~ILT~aHvV~~~~~i~ 175 (526)
+.+.++++.+ |||.|.+...... + ..||+......+.||||+|+ + ||||||+|||.++..+.
T Consensus 15 ~~~~~~~~~p---aVV~I~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~GSGfiI~~~~G~IlTnaHVv~~~~~i~ 91 (345)
T 3stj_A 15 LAPMLEKVLP---AVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQAQKIS 91 (345)
T ss_dssp SHHHHHHHGG---GEEEEEEEEC------------------------CCEEEEEEEEEEETTTTEEEECHHHHTTEEEEE
T ss_pred HHHHHHHhCC---cEEEEEEEEeecccccCchhhhhhcccccccccCcccceeEEEEEEECCCCEEEEChHHhCCCCEEE
Confidence 5566666666 9999998764321 0 12343334456899999999 5 89999999999999999
Q ss_pred EEEcCCCcEEEEEEEEeccCCCeEEEEecccccccCceeeecCCCC--cCCCcEEEEeeCCCCCceeEEEEEEeceeeee
Q 009784 176 LKKRGSDTKYLATVLAIGTECDIAMLTVEDDEFWEGVLPVEFGELP--ALQDAVTVVGYPIGGDTISVTSGVVSRIEILS 253 (526)
Q Consensus 176 V~~~~~g~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~pl~l~~~~--~~g~~V~~iG~p~~~~~~sv~~GiVs~~~~~~ 253 (526)
|++. +++.+++++++.|+.+||||||++... .+++++|+++. ..|++|+++|||.+... +++.|+|++..+..
T Consensus 92 V~~~-dg~~~~a~vv~~d~~~DlAlLkv~~~~---~~~~~~l~~s~~~~~G~~V~aiG~p~g~~~-~vt~G~Vs~~~~~~ 166 (345)
T 3stj_A 92 IQLN-DGREFDAKLIGSDDQSDIALLQIQNPS---KLTQIAIADSDKLRVGDFAVAVGNPFGLGQ-TATSGIVSALGRSG 166 (345)
T ss_dssp EECT-TSCEEEEEEEEEETTTTEEEEEESSCC---SCCCCCBCCGGGCCTTBEEEEEECGGGCSC-EEEEEEEEEEEECC
T ss_pred EEeC-CCcEEEEEEEEEcCCCCEEEEEEcccC---CCceEeecCcccCCCCCEEEEEECCCCCCC-cEEeeEEeeecccc
Confidence 9997 899999999999999999999997654 67888898644 67899999999999876 89999999987652
Q ss_pred ccCCceeeeEEEEcccCCCCCCCCeeecCCCeEEEEEeeccccC-ccccccccccHHHHHHHHHHHHHcCceeeccccCc
Q 009784 254 YVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHE-DVENIGYVIPTPVIMHFIQDYEKNGAYTGFPLLGV 332 (526)
Q Consensus 254 ~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VVGI~~~~~~~~-~~~~~~~aIP~~~i~~~l~~l~~~g~~~~~~~LGi 332 (526)
.. ......+||+|+.+++|||||||+|.+|+||||+++.+... +..+++|+||++.+++++++|.++|++. ++|||+
T Consensus 167 ~~-~~~~~~~iq~da~i~~GnSGGPLvn~~G~vVGI~s~~~~~~~~~~g~gfaIP~~~~~~~~~~l~~~g~v~-~~~lGv 244 (345)
T 3stj_A 167 LN-LEGLENFIQTDASINRGNSGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIK-RGLLGI 244 (345)
T ss_dssp SS-SSSSCCEEEECSCCCTTCTTCEEECTTSCEEEEEEEEECTTSSCSSCEEEEEHHHHHHHHHHHHHHSSCC-CEECCE
T ss_pred cC-CCCccCEEEEecccCCCcCccceeCCCCEEEEEEeccccCCCCcceeEEEEehHHHHHHHHHHHhccccc-ccccce
Confidence 22 12234579999999999999999999999999999877543 4568999999999999999999999998 999999
Q ss_pred eeeeccChhHHhhhcCCCCccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCC
Q 009784 333 EWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGD 411 (526)
Q Consensus 333 ~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~ 411 (526)
.++.+ ++++++.+|++ ...|++|.+|.++|||++ |||+||+|++|||++|.++.++. ..+....+|+
T Consensus 245 ~~~~~-~~~~a~~~gl~-~~~G~~V~~V~~~spA~~aGL~~GDvI~~ing~~v~~~~~l~----------~~l~~~~~g~ 312 (345)
T 3stj_A 245 KGTEM-SADIAKAFNLD-VQRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELR----------SRIATTEPGT 312 (345)
T ss_dssp EEEEC-CHHHHHHTTCS-CCSSEEEEEECTTSHHHHHTCCTTCEECEETTEECSCHHHHH----------HHHHTSCTTC
T ss_pred eeEee-cHHHHHhcCCC-CCceEEEEEeccCChHHHcCCCCCCEEEEECCEECCCHHHHH----------HHHHhcCCCC
Confidence 99999 89999999997 468999999999999999 99999999999999999998865 6777778999
Q ss_pred EEEEEEEECCEEEEEEEEecccccc
Q 009784 412 SAAVKVLRDSKILNFNITLATHRRL 436 (526)
Q Consensus 412 ~v~l~v~R~G~~~~~~v~l~~~~~~ 436 (526)
+++|+|+|+|+.+++++++...+..
T Consensus 313 ~v~l~v~R~g~~~~~~v~l~~~~~~ 337 (345)
T 3stj_A 313 KVKLGLLRNGKPLEVEVTLDTSTSS 337 (345)
T ss_dssp EEEEEEEETTEEEEEEEECEEC---
T ss_pred EEEEEEEECCEEEEEEEEEcccCCC
Confidence 9999999999999999999876543
No 4
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=100.00 E-value=6.3e-50 Score=428.08 Aligned_cols=367 Identities=24% Similarity=0.325 Sum_probs=285.0
Q ss_pred CChhhhhhhcccCCCeEEEEeeeeCCCC--------CCc----ccc---------CCCcceEEEEEEEe-C-CEEEeccc
Q 009784 110 DVEPGVARVVPAMDAVVKVFCVHTEPNF--------SLP----WQR---------KRQYSSSSSGFAIG-G-RRVLTNAH 166 (526)
Q Consensus 110 ~~~~~v~~~~~~~~SVV~I~~~~~~~~~--------~~P----~~~---------~~~~~~~GSGfvI~-~-g~ILT~aH 166 (526)
.+.++++++.| |||.|.+....... ..| |+. .....+.||||+|+ + ||||||+|
T Consensus 20 ~~~~~~~~~~p---avv~i~~~~~~~~~~~~~~~~~~~~~~~~ff~~~~~~~~~~~~~~~~~GSGfiI~~~~G~IlTn~H 96 (451)
T 3pv2_A 20 SMAPVLKNIMP---AIVNVAVQGYLPNDVTPPGSAGNDEENQPNNRPPQSRMPEKGRKFESIGSGVIIDPNNGVIITNDH 96 (451)
T ss_dssp CSHHHHHHHGG---GEEEEEEEEECCC-----------------------------CEEEEEEEEEEEETTTTEEEECHH
T ss_pred CHHHHHHHhCC---cEEEEEEEEeecccCCCccccccchhHHhhcccccccccccCcccceeEEEEEEECCCCEEEEChH
Confidence 36667777777 99999987643211 011 111 12245789999999 4 89999999
Q ss_pred ccCCCCeEEEEEcCCCcEEEEEEEEeccCCCeEEEEecccccccCceeeecCCCC--cCCCcEEEEeeCCCCC----cee
Q 009784 167 SVEHYTQVKLKKRGSDTKYLATVLAIGTECDIAMLTVEDDEFWEGVLPVEFGELP--ALQDAVTVVGYPIGGD----TIS 240 (526)
Q Consensus 167 vV~~~~~i~V~~~~~g~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~pl~l~~~~--~~g~~V~~iG~p~~~~----~~s 240 (526)
||.++..+.|++. +++.+++++++.|+.+||||||++.. .++++.|+++. ..|++|+++|||++.. ..+
T Consensus 97 Vv~~a~~i~V~~~-dg~~~~a~vv~~d~~~DlAlLkv~~~----~l~~~~l~~s~~~~~G~~V~aiG~P~G~~~~~~~~~ 171 (451)
T 3pv2_A 97 VIRNASLITVTLQ-DGRRLKARLIGGDSETDLAVLKIDAK----NLKSLVIGDSDKLEVGDFVVAIGNPFGLNSFGNSQS 171 (451)
T ss_dssp HHTTEEEEEEECT-TSCEEECEEEEEETTTTEEEEECCCS----SCCCCCBCCGGGCCTTCEEEEEECCCCC-----CCE
T ss_pred HhCCCCEEEEEEc-CCCEEEEEEEecCcCCcEEEEEEcCc----CCceeEecCcccCCCCCEEEEEECCCCccccccCCc
Confidence 9999999999997 89999999999999999999999763 57888898644 5799999999999876 138
Q ss_pred EEEEEEeceeeeeccCCceeeeEEEEcccCCCCCCCCeeecCCCeEEEEEeeccccC-ccccccccccHHHHHHHHHHHH
Q 009784 241 VTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHE-DVENIGYVIPTPVIMHFIQDYE 319 (526)
Q Consensus 241 v~~GiVs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VVGI~~~~~~~~-~~~~~~~aIP~~~i~~~l~~l~ 319 (526)
++.|+|+...+.... ...+..+||+|+.+++|||||||+|.+|+||||+++.+... +..+++||||++.+++++++|+
T Consensus 172 vt~Givs~~~r~~~~-~~~~~~~iqtda~i~~GnSGGPl~n~~G~VIGI~t~~~~~~~~~~g~gfaIP~~~~~~~~~~l~ 250 (451)
T 3pv2_A 172 ATFGIVSALKRSDLN-IEGVENFIQTDAAINPGNSGGALVNAKGELIGINTAILSPYGGNVGIGFAIPINMVKDVAQQII 250 (451)
T ss_dssp EEEEEEEEEC-----------CCEEESSCCCGGGTTSEEEETTCCEEEEEECCC------CCCEEEEEHHHHHHHHHHHH
T ss_pred eeEEEEeeccccccC-CCCcceEEEEecccCCCCCcCcccCCCCeEEEEEeEeecCCCCccceeeeehhHHHHHHHHHHH
Confidence 999999998764221 12234579999999999999999999999999999877543 4568999999999999999999
Q ss_pred HcCceeeccccCceeeeccChhHHhhhcCCCCccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCCCCcccccccch
Q 009784 320 KNGAYTGFPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERI 398 (526)
Q Consensus 320 ~~g~~~~~~~LGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~ 398 (526)
++|++. ++|||++++.+ ++++++.+|++....|++|.+|.++|||++ |||+||+|++|||++|.++.++.
T Consensus 251 ~~g~v~-r~~lGv~~~~~-~~~~a~~~gl~~~~~G~~V~~V~~~spA~~aGL~~GDvI~~vnG~~v~~~~~l~------- 321 (451)
T 3pv2_A 251 KFGSIH-RGLMGIFVQHL-TPELAQAMGYPEDFQGALVSQVNPNSPAELAGLKAGDIITQINDTKITQATQVK------- 321 (451)
T ss_dssp HHSSCC-CCBCCEEEEEC-CHHHHHHTTSCTTCCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHHH-------
T ss_pred hcCCcc-cccccceEEec-cHHHHHhcCCCcCCceEEEEecCCCChHHHcCCCCCCEEEEECCEEcCCHHHHH-------
Confidence 999998 99999999999 899999999986558999999999999999 99999999999999999998865
Q ss_pred hhhhhhhhcCCCCEEEEEEEECCEEEEEEEEecccccccCCCCCCCCCceEEEeeEEEEecccc------ceeeeeeeec
Q 009784 399 GFSYLVSQKYTGDSAAVKVLRDSKILNFNITLATHRRLIPSHNKGRPPSYYIIAGFVFSRCLYL------ISVLSMERIM 472 (526)
Q Consensus 399 ~~~~~l~~~~~G~~v~l~v~R~G~~~~~~v~l~~~~~~~p~~~~~~~p~~~i~gG~~f~~lt~~------~~~~~~~~i~ 472 (526)
..+....+|++++|+|+|+|+.+++++++...+............ ..|+.|.+++.. ...+.+..+.
T Consensus 322 ---~~l~~~~~g~~v~l~V~R~g~~~~~~v~l~~~~~~~~~~~~~~~~----~~G~~l~~~~~~~~~~~~~~Gv~V~~V~ 394 (451)
T 3pv2_A 322 ---TTISLLRVGSTVKIIVERDNKPLTLSAVVTDIKSHEQKLQSNNPF----LYGLALRAFEQESPPHGNVIGVQVVGAS 394 (451)
T ss_dssp ---HHHHTSCTTCEEEEEEEETTEEEEEEEECBCHHHHHHHHHHHSTT----TTTEEEEEEEEECTTSCEEEEEEEEEEC
T ss_pred ---HHHHhcCCCCEEEEEEEECCEEEEEEEEEccCCcccccccccccc----ccccccccCChhHhcccCCCceEEEEEC
Confidence 667777899999999999999999999988654211000000000 235666655421 1334555565
Q ss_pred c--hhhhccccccceeeeecccchhhhHHHH
Q 009784 473 N--MKLRSSFWTSSCIQCHNCQMSSLLWCLR 501 (526)
Q Consensus 473 ~--~~~~sg~~~~~~~~~~~~~~~~~~~~~~ 501 (526)
+ .+.++||+.||+|...|.+-..+...++
T Consensus 395 ~gspA~~aGL~~GD~I~~Vng~~v~~~~~~~ 425 (451)
T 3pv2_A 395 ENSAGWRAGIRPGDIIISANKKPVTDVKSLQ 425 (451)
T ss_dssp TTSHHHHHTCCTTCEEEEETTEECCSHHHHH
T ss_pred CCCHHHHcCCCCCCEEEEECCEECCCHHHHH
Confidence 4 4568999999999999998777765554
No 5
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=100.00 E-value=4e-48 Score=413.79 Aligned_cols=331 Identities=24% Similarity=0.317 Sum_probs=231.3
Q ss_pred ceEEEEEEEe-C-CEEEecccccCCCCeEEEEEcCCCcEEEEEEEEeccCCCeEEEEecccccccCceeeecCCCC--cC
Q 009784 148 SSSSSGFAIG-G-RRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIGTECDIAMLTVEDDEFWEGVLPVEFGELP--AL 223 (526)
Q Consensus 148 ~~~GSGfvI~-~-g~ILT~aHvV~~~~~i~V~~~~~g~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~pl~l~~~~--~~ 223 (526)
.+.||||+|+ + ||||||+|||.++..+.|++. +++.++|++++.|+.+||||||++... .+++++|+++. +.
T Consensus 85 ~~~GSG~ii~~~~g~IlTn~HVv~~a~~i~V~~~-dg~~~~a~vv~~d~~~DlAvlkv~~~~---~~~~~~l~~s~~~~~ 160 (448)
T 1ky9_A 85 MALGSGVIIDADKGYVVTNNHVVDNATVIKVQLS-DGRKFDAKMVGKDPRSDIALIQIQNPK---NLTAIKMADSDALRV 160 (448)
T ss_dssp EEEEEEEEEETTTTEEEEEHHHHTTEEEEEEEET-TSCEEEEEEEEEETTTTEEEEEESSCC---SCCCCCBCCGGGCCT
T ss_pred ccEEEEEEEECCCCEEEEChHHhCCCCEEEEEEC-CCCEEEEEEEEEcCCCCEEEEEecCCC---CCceEEecccccCCC
Confidence 3689999999 5 899999999999999999997 899999999999999999999998643 67889998754 67
Q ss_pred CCcEEEEeeCCCCCceeEEEEEEeceeeeeccCCceeeeEEEEcccCCCCCCCCeeecCCCeEEEEEeeccccC-ccccc
Q 009784 224 QDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHE-DVENI 302 (526)
Q Consensus 224 g~~V~~iG~p~~~~~~sv~~GiVs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VVGI~~~~~~~~-~~~~~ 302 (526)
|++|+++|||.+... +++.|+|+...+... ....+..+||+|+++++|||||||+|.+|+||||+++.+... +..++
T Consensus 161 G~~V~aiG~P~g~~~-tvt~Givs~~~r~~~-~~~~~~~~iqtda~i~~GnSGGpl~n~~G~vvGI~~~~~~~~~~~~g~ 238 (448)
T 1ky9_A 161 GDYTVAIGNPFGLGE-TVTSGIVSALGRSGL-NAENYENFIQTDAAINRGNAGGALVNLNGELIGINTAILAPDGGNIGI 238 (448)
T ss_dssp TCEEEEEECTTSSSC-EEEEEEEEEESSCC------CCCCEEESCCCTTSCCCSEEECTTSCEEEEEECSSTTSCCCSSS
T ss_pred CCEEEEEECCCCCCC-eEEeEEEeecccccc-CCCCccCEEEEcCCCCCCCCCCeeECCCCEEEEEEEEeecCCCCccce
Confidence 999999999999876 899999999875411 112234579999999999999999999999999999877543 34679
Q ss_pred cccccHHHHHHHHHHHHHcCceeeccccCceeeeccChhHHhhhcCCCCccceEEEEeCCCCcccC-CCCCCcEEEEECC
Q 009784 303 GYVIPTPVIMHFIQDYEKNGAYTGFPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDG 381 (526)
Q Consensus 303 ~~aIP~~~i~~~l~~l~~~g~~~~~~~LGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG 381 (526)
+|+||++.+++++++|.++|++. ++|||+.++.+ ++++++.+|++. ..|++|.+|.++|||++ |||+||+|++|||
T Consensus 239 gfaIP~~~~~~~~~~l~~~g~v~-~~~LGv~~~~~-~~~~a~~lgl~~-~~G~~V~~V~~gspA~~AGL~~GDvI~~inG 315 (448)
T 1ky9_A 239 GFAIPSNMVKNLTSQMVEYGQVK-RGELGIMGTEL-NSELAKAMKVDA-QRGAFVSQVLPNSSAAKAGIKAGDVITSLNG 315 (448)
T ss_dssp EEEEEHHHHHHHHHHHHHHSSCC-BCCCCCSCCCT-TSHHHHTSCCTT-CCSEECCCCTTCSSSTTTTCCTTCEECBSSS
T ss_pred eeeeecccchhhHHHHhhhcccc-eeccccccccc-cHHHHHHhCCCC-CCceEEEEeccCCHHHHcCCCCCCEEEEECC
Confidence 99999999999999999999998 99999999998 789999999974 57999999999999999 9999999999999
Q ss_pred EEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEEEEEEEEecccccccCCCCCCCCCceEEEeeEEEEeccc
Q 009784 382 IDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLATHRRLIPSHNKGRPPSYYIIAGFVFSRCLY 461 (526)
Q Consensus 382 ~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~~~~~v~l~~~~~~~p~~~~~~~p~~~i~gG~~f~~lt~ 461 (526)
++|.++.++. ..+....+|++++|+|+|+|+.+++++++...+..... ... .+....|+.+.++..
T Consensus 316 ~~v~~~~~l~----------~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~~~~~~~--~~~--~~~~~~G~~l~~~~~ 381 (448)
T 1ky9_A 316 KPISSFAALR----------AQVGTMPVGSKLTLGLLRDGKQVNVNLELQQSSQNQVD--SSS--IFNGIEGAEMSNKGK 381 (448)
T ss_dssp SBCCSSHHHH----------HHTTSSBTTCCCEEEEESSSCEEECCCC--------------------------------
T ss_pred EEcCCHHHHH----------HHHHhcCCCCEEEEEEEECCEEEEEEEEEecCCCcccc--ccc--ccccccceEeeccCC
Confidence 9999998864 56666678999999999999998888877543221000 000 111123666655432
Q ss_pred cceeeeeeeecc--hhhhccccccceeeeecccchhhhHHHHH
Q 009784 462 LISVLSMERIMN--MKLRSSFWTSSCIQCHNCQMSSLLWCLRC 502 (526)
Q Consensus 462 ~~~~~~~~~i~~--~~~~sg~~~~~~~~~~~~~~~~~~~~~~~ 502 (526)
. ..+.+..+.+ .+.++||+.||+|...|.+-..+..+|+-
T Consensus 382 ~-~gv~V~~V~~gspA~~aGL~~GDiI~~vng~~v~~~~~l~~ 423 (448)
T 1ky9_A 382 D-QGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAELRK 423 (448)
T ss_dssp -------------------------------------------
T ss_pred C-CeEEEEEecCCCHHHHcCCCCCCEEEEECCEECCCHHHHHH
Confidence 2 2344445554 45689999999999999977776666654
No 6
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=100.00 E-value=9.3e-47 Score=386.73 Aligned_cols=298 Identities=23% Similarity=0.359 Sum_probs=252.3
Q ss_pred ChhhhhhhcccCCCeEEEEeeeeCCCCCCccccCCCcceEEEEEEEe-CCEEEecccccCCCCeEEEEEcCCCcEEEEEE
Q 009784 111 VEPGVARVVPAMDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFAIG-GRRVLTNAHSVEHYTQVKLKKRGSDTKYLATV 189 (526)
Q Consensus 111 ~~~~v~~~~~~~~SVV~I~~~~~~~~~~~P~~~~~~~~~~GSGfvI~-~g~ILT~aHvV~~~~~i~V~~~~~g~~~~a~v 189 (526)
+.+.++++.+ |||+|.+...... |.......+.||||+|+ +||||||+||+.++..+.|++. +++.+.+++
T Consensus 11 ~~~~~~~~~~---sVV~I~~~~~~~~----~~~~~~~~~~gsG~iI~~~G~IlT~aHvv~~~~~i~V~~~-~g~~~~a~v 82 (318)
T 1te0_A 11 YNLAVRRAAP---AVVNVYNRGLNTN----SHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQ-DGRVFEALL 82 (318)
T ss_dssp CHHHHHHHGG---GEEEEEEEEECSS----SSCCEEEEEEEEEEECSTTCEEEEEHHHHTTCSEEEEECT-TSCEEEEEE
T ss_pred HHHHHHhcCC---cEEEEEeEeccCC----cccccccCccEEEEEEeCCCEEEECHHHcCCCCEEEEEeC-CCCEEEEEE
Confidence 5566667766 9999999775432 22223345789999999 6799999999999999999997 899999999
Q ss_pred EEeccCCCeEEEEecccccccCceeeecCCC--CcCCCcEEEEeeCCCCCceeEEEEEEeceeeeeccCCceeeeEEEEc
Q 009784 190 LAIGTECDIAMLTVEDDEFWEGVLPVEFGEL--PALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQID 267 (526)
Q Consensus 190 v~~d~~~DlAlLkv~~~~~~~~~~pl~l~~~--~~~g~~V~~iG~p~~~~~~sv~~GiVs~~~~~~~~~~~~~~~~i~~d 267 (526)
++.|+.+||||||++... .+++++|+++ ...|++|+++|||.+... +++.|+|+...+..+.. .....+|++|
T Consensus 83 ~~~d~~~DlAllk~~~~~---~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~-~~~~g~vs~~~~~~~~~-~~~~~~i~~d 157 (318)
T 1te0_A 83 VGSDSLTDLAVLIIKATG---GLPTIPINARRVPHIGDVVLAIGNPYNLGQ-TITQGIISATGRIGLNP-TGRQNFLQTD 157 (318)
T ss_dssp EEEETTTTEEEEECCCSS---CCCCCCCCTTCCCCTTCEEEEECCCSSSSC-CEEEEEEEECCCCCCCT-TCSCCSEEES
T ss_pred EEeCCCceEEEEEEeCCC---CCceEEeeCccCCCCCCEEEEEEcCCCCCC-cEEeeEEecccccccCC-CCcCCEEEEC
Confidence 999999999999999763 5788888864 467999999999998765 79999999876543221 1233579999
Q ss_pred ccCCCCCCCCeeecCCCeEEEEEeeccccC----ccccccccccHHHHHHHHHHHHHcCceeeccccCceeeeccChhHH
Q 009784 268 AAINSGNSGGPAFNDKGKCVGIAFQSLKHE----DVENIGYVIPTPVIMHFIQDYEKNGAYTGFPLLGVEWQKMENPDLR 343 (526)
Q Consensus 268 a~i~~G~SGGPlvn~~G~VVGI~~~~~~~~----~~~~~~~aIP~~~i~~~l~~l~~~g~~~~~~~LGi~~~~~~~~~~~ 343 (526)
+.+++|+|||||+|.+|+||||++...... ...+++|+||++.+++++++|.++|++. ++|||+.++.+ ++.++
T Consensus 158 ~~~~~G~SGGPl~~~~G~vvGI~s~~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~g~~~-~~~lGi~~~~~-~~~~~ 235 (318)
T 1te0_A 158 ASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVI-RGYIGIGGREI-APLHA 235 (318)
T ss_dssp SCCCTTTTTSEEECTTCCEEEEEECCSSSSSSCCSCCSCEEEEEHHHHHHHHHHHHHHSSCC-CEECCEEEEEC-SCCCS
T ss_pred CCCCCCCCcCceECCCCeEEEEEeeeeccCCccccccceEEeccHHHHHHHHHHHHHcCCcc-cccceeEeeec-chhHH
Confidence 999999999999999999999999876432 3467899999999999999999999988 99999999998 67788
Q ss_pred hhhcCCCCccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCE
Q 009784 344 VAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (526)
Q Consensus 344 ~~lgl~~~~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~ 422 (526)
+.+|++ ...|++|.+|.++|||++ |||+||+|++|||++|.++.++. ..+....+|++++|+|+|+|+
T Consensus 236 ~~~g~~-~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~l~----------~~l~~~~~g~~v~l~v~R~g~ 304 (318)
T 1te0_A 236 QGGGID-QLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETM----------DQVAEIRPGSVIPVVVMRDDK 304 (318)
T ss_dssp SSSCSS-SCCCEEEEEECTTSTTTTTCCCTTCCEEEETTEECCCHHHHH----------HHHHTSCTTCEEEEEEESSSC
T ss_pred HhccCC-CCCcEEEEEeCCCChHHHCCCCCCCEEEEECCEEcCCHHHHH----------HHHHhcCCCCEEEEEEEECCE
Confidence 889986 457999999999999999 99999999999999999988764 666666789999999999999
Q ss_pred EEEEEEEecccc
Q 009784 423 ILNFNITLATHR 434 (526)
Q Consensus 423 ~~~~~v~l~~~~ 434 (526)
.+++++++...+
T Consensus 305 ~~~~~v~~~~~~ 316 (318)
T 1te0_A 305 QLTLQVTIQEYP 316 (318)
T ss_dssp EEEEEEECEECC
T ss_pred EEEEEEEEccCC
Confidence 999999887653
No 7
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=100.00 E-value=1.3e-45 Score=382.80 Aligned_cols=296 Identities=24% Similarity=0.367 Sum_probs=244.4
Q ss_pred hhcccCCCeEEEEeeeeCCCCCCccccCCCcceEEEEEEEe-CCEEEecccccCCCCeEEEEEcCCCcEEEEEEEEeccC
Q 009784 117 RVVPAMDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFAIG-GRRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIGTE 195 (526)
Q Consensus 117 ~~~~~~~SVV~I~~~~~~~~~~~P~~~~~~~~~~GSGfvI~-~g~ILT~aHvV~~~~~i~V~~~~~g~~~~a~vv~~d~~ 195 (526)
.++++.+|||.|.......+....+ ......+.||||+|+ +||||||+||+.++..+.|.+. +++.+++++++.|+.
T Consensus 22 ~~~~~~~sVV~I~~~~~~~~~~~~~-~~~~~~g~GSG~iI~~~G~IlT~aHvv~~~~~i~V~~~-~g~~~~a~~v~~d~~ 99 (348)
T 3qo6_A 22 LFQENTPSVVYITNLAVRQDAFTLD-VLEVPQGSGSGFVWDKQGHIVTNYHVIRGASDLRVTLA-DQTTFDAKVVGFDQD 99 (348)
T ss_dssp HHHHHGGGEEEEEEEEEEECSSSCC-EEEEEEEEEEEEEEETTTEEEECHHHHTTCSEEEEECT-TSCEEEEEEEEEEGG
T ss_pred HHHHhCCCEEEEEEEeecccccccc-cccccCceEEEEEEeCCCEEEECHHHhCCCcEEEEEEC-CCCEEEEEEEEEcCc
Confidence 3444555999999876543321111 111234689999999 6799999999999999999997 899999999999999
Q ss_pred CCeEEEEecccccccCceeeecCCCC--cCCCcEEEEeeCCCCCceeEEEEEEeceeeeecc--CCceeeeEEEEcccCC
Q 009784 196 CDIAMLTVEDDEFWEGVLPVEFGELP--ALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYV--HGSTELLGLQIDAAIN 271 (526)
Q Consensus 196 ~DlAlLkv~~~~~~~~~~pl~l~~~~--~~g~~V~~iG~p~~~~~~sv~~GiVs~~~~~~~~--~~~~~~~~i~~da~i~ 271 (526)
+||||||++.+. ..+++++|+++. ..|+.|+++|||.+... +++.|+|+.+.+.... .+.....++++|+.++
T Consensus 100 ~DlAlLkl~~~~--~~~~~i~l~~s~~~~~G~~v~~iG~p~g~~~-~~~~g~vs~~~~~~~~~~~~~~~~~~i~~da~i~ 176 (348)
T 3qo6_A 100 KDVAVLRIDAPK--NKLRPIPVGVSADLLVGQKVFAIGNPFGLDH-TLTTGVISGLRREISSAATGRPIQDVIQTDAAIN 176 (348)
T ss_dssp GTEEEEECCCCG--GGCCCCCBCCSTTCCTTCEEEEEECGGGCTT-EEEEEEEEEEEEEECCSSSSSCEEEEEEECSCCC
T ss_pred CCEEEEEEcCCC--CCceeEEecCcccCCCCCEEEEEECCCCCCC-cEeEEEEEeeccccccccCCCcccCEEEEeCCcC
Confidence 999999998753 257888887643 57899999999998776 8999999988764322 2233446799999999
Q ss_pred CCCCCCeeecCCCeEEEEEeeccccC-ccccccccccHHHHHHHHHHHHHcCceeeccccCceeeeccChhHHhhhcCCC
Q 009784 272 SGNSGGPAFNDKGKCVGIAFQSLKHE-DVENIGYVIPTPVIMHFIQDYEKNGAYTGFPLLGVEWQKMENPDLRVAMSMKA 350 (526)
Q Consensus 272 ~G~SGGPlvn~~G~VVGI~~~~~~~~-~~~~~~~aIP~~~i~~~l~~l~~~g~~~~~~~LGi~~~~~~~~~~~~~lgl~~ 350 (526)
+|||||||+|.+|+||||+++.+... ...+++|+||++.+++++++|.++|++. +||||+++.+. ...+.+|+
T Consensus 177 ~G~SGGPLvn~~G~vvGI~s~~~~~~~~~~g~gfaiP~~~~~~~~~~l~~~g~~~-~~~lGi~~~~~---~~~~~~~~-- 250 (348)
T 3qo6_A 177 PGNSGGPLLDSSGTLIGINTAIYSPSGASSGVGFSIPVDTVGGIVDQLVRFGKVT-RPILGIKFAPD---QSVEQLGV-- 250 (348)
T ss_dssp TTCTTCEEECTTSCEEEEEEEEECSSSSCSSCEEEEEHHHHHHHHHHHHHHSSCC-CEECCCEECCT---TTTTTTTC--
T ss_pred CCCcHHHhhCCCCeEEEEEEeeecCCCCcccEEEEEEecchHHHHHHHHhCCcee-eeecCcEEccc---hhhhhcCC--
Confidence 99999999999999999999877543 3578999999999999999999999998 99999998754 22344554
Q ss_pred CccceEEEEeCCCCcccC-CCCC-----------CcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEE
Q 009784 351 DQKGVRIRRVDPTAPESE-VLKP-----------SDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVL 418 (526)
Q Consensus 351 ~~~Gv~V~~V~~~spA~~-GL~~-----------GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~ 418 (526)
.|++|.+|.++|||++ |||+ ||+|++|||++|.++.++. ..+...++|++++|+|+
T Consensus 251 --~Gv~V~~V~~~spA~~AGl~~~~~~~~~~l~~GDvI~~ing~~v~~~~dl~----------~~l~~~~~g~~v~l~v~ 318 (348)
T 3qo6_A 251 --SGVLVLDAPPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVSNGSDLY----------RILDQCKVGDEVTVEVL 318 (348)
T ss_dssp --SSEEEEECCSSSHHHHHTCCCCEECSSSCEECCCEECEETTBCCSSSHHHH----------HHHTTCCTTCEEEEEEE
T ss_pred --ceEEEEEecCCChHHHcCCccccccccCCCCCCCEEEEECCEEeCCHHHHH----------HHHHhCCCcCEEEEEEE
Confidence 6999999999999999 9999 9999999999999998875 67777788999999999
Q ss_pred ECCEEEEEEEEeccccc
Q 009784 419 RDSKILNFNITLATHRR 435 (526)
Q Consensus 419 R~G~~~~~~v~l~~~~~ 435 (526)
|+|+.+++++++...+.
T Consensus 319 R~g~~~~~~v~l~~~~~ 335 (348)
T 3qo6_A 319 RGDHKEKISVTLEPKPD 335 (348)
T ss_dssp CSSSEEEEEEECEECC-
T ss_pred ECCEEEEEEEEEccCCC
Confidence 99999999999987643
No 8
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=100.00 E-value=5.5e-44 Score=367.02 Aligned_cols=281 Identities=25% Similarity=0.329 Sum_probs=233.7
Q ss_pred ChhhhhhhcccCCCeEEEEeeeeCCCCCCccccCCCcceEEEEEEEe-CCEEEecccccCCCC---------eEEEEEcC
Q 009784 111 VEPGVARVVPAMDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFAIG-GRRVLTNAHSVEHYT---------QVKLKKRG 180 (526)
Q Consensus 111 ~~~~v~~~~~~~~SVV~I~~~~~~~~~~~P~~~~~~~~~~GSGfvI~-~g~ILT~aHvV~~~~---------~i~V~~~~ 180 (526)
+.+.++++.+ |||+|..... ...+.||||+|+ +||||||+||+.+.. .+.|++.
T Consensus 8 ~~~~~~~~~~---svV~I~~~~~------------~~~~~gsG~iI~~~g~ILT~aHvv~~~~~~~~~~~~~~i~V~~~- 71 (324)
T 1y8t_A 8 VEQVAAKVVP---SVVMLETDLG------------RQSEEGSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFS- 71 (324)
T ss_dssp HHHHHHHHGG---GEEEEEEEC----------------CEEEEEECCTTSEEEEEHHHHTTCC--------CEEEEEET-
T ss_pred HHHHHHHhcC---cEEEEEEEcc------------CCCceEEEEEEeCCCEEEEChHHcCCcccccccCCceEEEEEeC-
Confidence 4455566665 9999987542 234789999999 589999999998765 7999997
Q ss_pred CCcEEEEEEEEeccCCCeEEEEecccccccCceeeecCCC--CcCCCcEEEEeeCCCCCceeEEEEEEeceeeeeccC--
Q 009784 181 SDTKYLATVLAIGTECDIAMLTVEDDEFWEGVLPVEFGEL--PALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVH-- 256 (526)
Q Consensus 181 ~g~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~pl~l~~~--~~~g~~V~~iG~p~~~~~~sv~~GiVs~~~~~~~~~-- 256 (526)
+++.++++++++|+.+||||||++.+. .+++++|+++ ...|++|+++|||.+... +++.|+|+...+.....
T Consensus 72 ~g~~~~a~vv~~d~~~DlAllkl~~~~---~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~-~~~~G~vs~~~~~~~~~~~ 147 (324)
T 1y8t_A 72 DGRTAPFTVVGADPTSDIAVVRVQGVS---GLTPISLGSSSDLRVGQPVLAIGSPLGLEG-TVTTGIVSALNRPVSTTGE 147 (324)
T ss_dssp TCCEECEEEEECCTTTTEEEEEECSCC---SCCCCEECCSTTCCTTCEEEEEECGGGCTT-EEEEEEEEEEEEEECC---
T ss_pred CCCEEEEEEEEeCCCCCEEEEEECCCC---CCceEEecCcccCCCCCEEEEEEcCCCCCC-cEeeeEEeecccccccccc
Confidence 899999999999999999999999753 6789999864 467999999999998765 78999999876532211
Q ss_pred -C--ceeeeEEEEcccCCCCCCCCeeecCCCeEEEEEeeccccC--------ccccccccccHHHHHHHHHHHHHcCcee
Q 009784 257 -G--STELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHE--------DVENIGYVIPTPVIMHFIQDYEKNGAYT 325 (526)
Q Consensus 257 -~--~~~~~~i~~da~i~~G~SGGPlvn~~G~VVGI~~~~~~~~--------~~~~~~~aIP~~~i~~~l~~l~~~g~~~ 325 (526)
+ .....+||+|+.+++|||||||+|.+|+||||+++..... +..+++|+||++.+++++++|+++|++.
T Consensus 148 ~g~~~~~~~~i~~d~~~~~G~SGGPlv~~~G~vvGI~s~~~~~~~~~~~~~~~~~g~~~aIP~~~v~~~l~~l~~~g~~~ 227 (324)
T 1y8t_A 148 AGNQNTVLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADELISTGKAS 227 (324)
T ss_dssp ----CCCEEEEEECSCCCTTCTTEEEECTTSEEEEEEEEECCC-------CCCCSSCEEEEEHHHHHHHHHHHHHHSCCC
T ss_pred cCcccccCCEEEEcCCCCCCCccCcEECCCCeEEEEEeeecccCcccccccccccceEEecCHHHHHHHHHHHHHcCCcc
Confidence 1 1234689999999999999999999999999998876432 2357899999999999999999999988
Q ss_pred eccccCceeeeccChhHHhhhcCCCCccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCCCCcccccccchhhhhhh
Q 009784 326 GFPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLV 404 (526)
Q Consensus 326 ~~~~LGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l 404 (526)
++|||+.+... ....|++|.+|.++|||++ |||+||+|++|||++|.++.++. ..+
T Consensus 228 -~~~lGi~~~~~------------~~~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~l~----------~~l 284 (324)
T 1y8t_A 228 -HASLGVQVTND------------KDTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALV----------AAV 284 (324)
T ss_dssp -CEECCEEEESC------------SSSSSEEEEEECTTSTTTTTTCCTTCEEEEETTEECCSHHHHH----------HHH
T ss_pred -ccccceEeeec------------cCCCceEEEEECCCChHHHcCCCCCCEEEEECCEECCCHHHHH----------HHH
Confidence 99999998754 1357899999999999999 99999999999999999988764 566
Q ss_pred hhcCCCCEEEEEEEE-CCEEEEEEEEecccc
Q 009784 405 SQKYTGDSAAVKVLR-DSKILNFNITLATHR 434 (526)
Q Consensus 405 ~~~~~G~~v~l~v~R-~G~~~~~~v~l~~~~ 434 (526)
....+|++++|+|+| +|+.+++++++...+
T Consensus 285 ~~~~~g~~v~l~v~R~~g~~~~~~v~~~~~~ 315 (324)
T 1y8t_A 285 RSKAPGATVALTFQDPSGGSRTVQVTLGKAE 315 (324)
T ss_dssp HTSCTTCEEEEEEECSSCCEEEEEEECEEC-
T ss_pred HhcCCCCEEEEEEEECCCCEEEEEEEEccCC
Confidence 666789999999999 999999999987664
No 9
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=100.00 E-value=5.9e-45 Score=374.45 Aligned_cols=290 Identities=27% Similarity=0.403 Sum_probs=233.4
Q ss_pred ChhhhhhhcccCCCeEEEEeeeeCCCCCCccccCCCcceEEEEEEEe-CCEEEecccccCCCCeEEEEEcCCCcEEEEEE
Q 009784 111 VEPGVARVVPAMDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFAIG-GRRVLTNAHSVEHYTQVKLKKRGSDTKYLATV 189 (526)
Q Consensus 111 ~~~~v~~~~~~~~SVV~I~~~~~~~~~~~P~~~~~~~~~~GSGfvI~-~g~ILT~aHvV~~~~~i~V~~~~~g~~~~a~v 189 (526)
+.+.++++.+ |||+|...... ||.......+.||||+|+ +||||||+||+.+...+.|++. +|+.+++++
T Consensus 17 ~~~~~~~~~~---sVV~I~~~~~~-----~~~~~~~~~~~gsG~iI~~~G~IlT~aHvv~~~~~i~V~~~-~g~~~~a~v 87 (325)
T 1lcy_A 17 IADVVEKTAP---AVVYIEILDRH-----PFLGREVPISNGSGFVVAADGLIVTNAHVVADRRRVRVRLL-SGDTYEAVV 87 (325)
T ss_dssp HHHHHHHHGG---GEEEEEEEEEE-----TTTTEEEEEEEEEEEEEETTTEEEECHHHHTTCSEEEEECT-TSCEEEEEE
T ss_pred HHHHHHHhCC---cEEEEEEEecC-----ccCCCccccccEEEEEEeCCCEEEECHHHcCCCCEEEEEeC-CCCEEEEEE
Confidence 4455566666 99999876532 343322345789999999 6799999999999999999997 899999999
Q ss_pred EEeccCCCeEEEEecccccccCceeeecCCC--CcCCCcEEEEeeCCCCCceeEEEEEEeceeeeeccCC--ceeeeEEE
Q 009784 190 LAIGTECDIAMLTVEDDEFWEGVLPVEFGEL--PALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHG--STELLGLQ 265 (526)
Q Consensus 190 v~~d~~~DlAlLkv~~~~~~~~~~pl~l~~~--~~~g~~V~~iG~p~~~~~~sv~~GiVs~~~~~~~~~~--~~~~~~i~ 265 (526)
++.|+.+||||||++... .+++++|+++ ...|++|+++|||.+... +++.|+|+...+.....+ .....+||
T Consensus 88 ~~~d~~~DlAllkl~~~~---~~~~~~l~~~~~~~~G~~v~~~G~p~~~~~-~v~~G~vs~~~~~~~~~g~~~~~~~~i~ 163 (325)
T 1lcy_A 88 TAVDPVADIATLRIQTKE---PLPTLPLGRSADVRQGEFVVAMGSPFALQN-TITSGIVSSAQRPARDLGLPQTNVEYIQ 163 (325)
T ss_dssp EEEETTTTEEEEECCCSS---CCCCCCBCCGGGCCTTCEEEECCCTTSSSS-CCEEEEBCSCSCC---------CCCCEE
T ss_pred EEECCCCCEEEEEEcCCC---CCceEEecccccCCCCCEEEEEECCCCCCC-cEEeEEEecccccccccCCCCCCCCEEE
Confidence 999999999999999764 5788899864 367999999999998765 799999998876321111 12335799
Q ss_pred EcccCCCCCCCCeeecCCCeEEEEEeeccccCccccccccccHHHHHHHHHHHHHc------CceeeccccCceeeeccC
Q 009784 266 IDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEKN------GAYTGFPLLGVEWQKMEN 339 (526)
Q Consensus 266 ~da~i~~G~SGGPlvn~~G~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~------g~~~~~~~LGi~~~~~~~ 339 (526)
+|+.+++|+|||||+|.+|+||||++... ..+++|+||++.++++++++++. +.+. ++|||+.+..+ +
T Consensus 164 ~d~~~~~G~SGGPl~~~~G~vVGI~s~~~----~~g~~~aip~~~i~~~l~~~~~~~~~~g~~~~~-r~~lGv~~~~l-~ 237 (325)
T 1lcy_A 164 TDAAIDFGNAGGPLVNLDGEVIGVNTMKV----TAGISFAIPSDRLREFLHRGEKKNSSSGISGSQ-RRYIGVMMLTL-S 237 (325)
T ss_dssp ESSCCSTTTTTSEEEETTSCEEEEEEEEE----ETTEEEEEEHHHHHHHTCC----------------EECCEEEEEC-C
T ss_pred EcCCCCCCCccccEECCCCEEEEEEeEee----cCCeeEEEEHHHHHHHHHHhhhccccccccccc-ccccceEeecC-C
Confidence 99999999999999999999999999865 25789999999999999998764 3455 89999999999 8
Q ss_pred hhHHhhhcCCC-----CccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEE
Q 009784 340 PDLRVAMSMKA-----DQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSA 413 (526)
Q Consensus 340 ~~~~~~lgl~~-----~~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v 413 (526)
+++++.++++. ...|++|.+|.++|||++ |||+||+|++|||++|.++.++. ..+.. ++++
T Consensus 238 ~~~~~~~~l~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GDvI~~ing~~v~~~~~l~----------~~l~~---~~~v 304 (325)
T 1lcy_A 238 PSILAELQLREPSFPDVQHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNAEDVY----------EAVRT---QSQL 304 (325)
T ss_dssp HHHHHHHTTSCTTSCCCSSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHHH----------HHHTT---CSSE
T ss_pred HHHHHhhCccccccccCCCCeEEEEeCcCChHHHCCCCCCCEEEEECCEEcCCHHHHH----------HHHhC---CCeE
Confidence 88888888853 357999999999999999 99999999999999999988763 44433 6899
Q ss_pred EEEEEECCEEEEEEEEecc
Q 009784 414 AVKVLRDSKILNFNITLAT 432 (526)
Q Consensus 414 ~l~v~R~G~~~~~~v~l~~ 432 (526)
.|+|+|+|+.+++++++..
T Consensus 305 ~l~v~R~g~~~~~~v~~~~ 323 (325)
T 1lcy_A 305 AVQIRRGRETLTLYVTPEV 323 (325)
T ss_dssp EEEEEETTEEEEEEECCEE
T ss_pred EEEEEECCEEEEEEEEEec
Confidence 9999999999998887653
No 10
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=100.00 E-value=1.3e-43 Score=365.45 Aligned_cols=292 Identities=23% Similarity=0.376 Sum_probs=150.1
Q ss_pred ChhhhhhhcccCCCeEEEEeeeeCCCCCCccccCCCcceEEEEEEEe-CCEEEecccccCCCCeEEEEEcCCCcEEEEEE
Q 009784 111 VEPGVARVVPAMDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFAIG-GRRVLTNAHSVEHYTQVKLKKRGSDTKYLATV 189 (526)
Q Consensus 111 ~~~~v~~~~~~~~SVV~I~~~~~~~~~~~P~~~~~~~~~~GSGfvI~-~g~ILT~aHvV~~~~~i~V~~~~~g~~~~a~v 189 (526)
+.+.++++.+ |||+|...... ||.......+.||||+|+ +||||||+||+.+...+.|.+. +++.+.+++
T Consensus 16 ~~~~~~~~~~---sVV~I~~~~~~-----~~~~~~~~~~~GSG~iI~~~G~ILTaaHvv~~~~~i~V~~~-~g~~~~a~~ 86 (332)
T 3num_A 16 IADVVEKIAP---AVVHIELFRKL-----PFSKREVPVASGSGFIVSEDGLIVTNAHVVTNKHRVKVELK-NGATYEAKI 86 (332)
T ss_dssp HHHHHHHHGG---GEEEEEEEEEC-----TTSSCEEEEEEEEEEEEETTTEEEECTTTCCTTSEEEEEET-TSCEEEEEE
T ss_pred HHHHHHHhcC---cEEEEEEEecc-----ccCCCcceeeeEEEEEEeCCCEEEEChHHcCCCCEEEEEEC-CCCEEEEEE
Confidence 3445555555 99999987643 344444556799999999 6799999999999999999997 899999999
Q ss_pred EEeccCCCeEEEEecccccccCceeeecCCC--CcCCCcEEEEeeCCCCCceeEEEEEEeceeeeeccC--CceeeeEEE
Q 009784 190 LAIGTECDIAMLTVEDDEFWEGVLPVEFGEL--PALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVH--GSTELLGLQ 265 (526)
Q Consensus 190 v~~d~~~DlAlLkv~~~~~~~~~~pl~l~~~--~~~g~~V~~iG~p~~~~~~sv~~GiVs~~~~~~~~~--~~~~~~~i~ 265 (526)
++.|+.+||||||++.+. .++++.|+++ ...|+.|+++|||.+... +++.|+|+...+..... ......+++
T Consensus 87 ~~~d~~~DlAlL~l~~~~---~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~-~~~~g~vs~~~~~~~~~~~~~~~~~~i~ 162 (332)
T 3num_A 87 KDVDEKADIALIKIDHQG---KLPVLLLGRSSELRPGEFVVAIGSPFSLQN-TVTTGIVSTTQRGGKELGLRNSDMDYIQ 162 (332)
T ss_dssp EEEETTTTEEEEEECCSS---CCCCCCBCCTTSCCTTCEEEEECC-----C-CEEEEEEEEC--------------CCEE
T ss_pred EEecCCCCeEEEEEcCCC---CCceeeecCcccCCCCCEEEEEECCCCCCc-ceeeeEEEeecccccccCcCCCcCCEEE
Confidence 999999999999999764 5788888754 356899999999998775 78999999876532111 112235789
Q ss_pred EcccCCCCCCCCeeecCCCeEEEEEeeccccCccccccccccHHHHHHHHHHHHH---cC--ceeeccccCceeeeccCh
Q 009784 266 IDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEK---NG--AYTGFPLLGVEWQKMENP 340 (526)
Q Consensus 266 ~da~i~~G~SGGPlvn~~G~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~---~g--~~~~~~~LGi~~~~~~~~ 340 (526)
+|+.+++|+|||||+|.+|+||||++... ..+++|+||++.++++++++.+ .| .+. ++|||+.+..+ +.
T Consensus 163 ~d~~i~~G~SGGPlv~~~G~vvGI~s~~~----~~g~~~aip~~~i~~~l~~~~~~~~~g~~~~~-r~~lGi~~~~~-~~ 236 (332)
T 3num_A 163 TDAIINYGNAGGPLVNLDGEVIGINTLKV----TAGISFAIPSDKIKKFLTESHDRQAKGKAITK-KKYIGIRMMSL-TS 236 (332)
T ss_dssp ESSCCCTTTTTSEEEETTSCEEEEEEEEE----ETTEEEEEEHHHHHHHHHHHCC-------------------------
T ss_pred EECCcCCCCcHHHhhCCCCcEEEEEeeEe----cccceEEECHHHHHHHHHHHhhhhccCccccc-ccccceEEEec-CH
Confidence 99999999999999999999999999865 3679999999999999999852 22 344 89999999988 55
Q ss_pred hHHhhh-----cCCCCccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEE
Q 009784 341 DLRVAM-----SMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAA 414 (526)
Q Consensus 341 ~~~~~l-----gl~~~~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~ 414 (526)
+.++.+ +++....|++|.+|.++|||++ |||+||+|++|||++|.++.++. ..+. .|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~----------~~l~---~~~~v~ 303 (332)
T 3num_A 237 SKAKELKDRHRDFPDVISGAYIIEVIPDTPAEAGGLKENDVIISINGQSVVSANDVS----------DVIK---RESTLN 303 (332)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHhhhhhhhccccCCCCCceEEEEeccCCChHHcCCCCCCEEEEECCEECCCHHHHH----------HHHh---CCCeEE
Confidence 444433 4444567999999999999999 99999999999999999999874 3443 388999
Q ss_pred EEEEECCEEEEEEEEecccc
Q 009784 415 VKVLRDSKILNFNITLATHR 434 (526)
Q Consensus 415 l~v~R~G~~~~~~v~l~~~~ 434 (526)
|+|+|+|+.+++++++....
T Consensus 304 l~v~R~g~~~~~~v~p~~~~ 323 (332)
T 3num_A 304 MVVRRGNEDIMITVIPEEID 323 (332)
T ss_dssp --------------------
T ss_pred EEEEECCEEEEEEEEEeeec
Confidence 99999999999998887653
No 11
>3sti_A Protease DEGQ; serine protease, PDZ domain, chaperone, hydrolase; 2.60A {Escherichia coli}
Probab=100.00 E-value=3.1e-33 Score=275.84 Aligned_cols=209 Identities=26% Similarity=0.360 Sum_probs=152.8
Q ss_pred ChhhhhhhcccCCCeEEEEeeeeCCC-------------CCCccccCCCcceEEEEEEEe-C-CEEEecccccCCCCeEE
Q 009784 111 VEPGVARVVPAMDAVVKVFCVHTEPN-------------FSLPWQRKRQYSSSSSGFAIG-G-RRVLTNAHSVEHYTQVK 175 (526)
Q Consensus 111 ~~~~v~~~~~~~~SVV~I~~~~~~~~-------------~~~P~~~~~~~~~~GSGfvI~-~-g~ILT~aHvV~~~~~i~ 175 (526)
+.+.++++.+ |||.|.+...... ...||.......+.||||+|+ + ||||||+|||.++..+.
T Consensus 15 ~~~~~~~~~p---aVV~I~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~GSGfiI~~~~G~IlTnaHvv~~a~~i~ 91 (245)
T 3sti_A 15 LAPMLEKVLP---AVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQAQKIS 91 (245)
T ss_dssp SHHHHHHHGG---GEEEC----------------------------------CCEEEEEETTTTEEEECGGGC----CEE
T ss_pred HHHHHHHhCC---ceEEEEEEEeeccccccchhhhhhccccccccccccccceEEEEEEeCCCCEEEEcHHHhCCCCEEE
Confidence 5566666666 9999988664321 012333333346789999999 5 89999999999999999
Q ss_pred EEEcCCCcEEEEEEEEeccCCCeEEEEecccccccCceeeecCCC--CcCCCcEEEEeeCCCCCceeEEEEEEeceeeee
Q 009784 176 LKKRGSDTKYLATVLAIGTECDIAMLTVEDDEFWEGVLPVEFGEL--PALQDAVTVVGYPIGGDTISVTSGVVSRIEILS 253 (526)
Q Consensus 176 V~~~~~g~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~pl~l~~~--~~~g~~V~~iG~p~~~~~~sv~~GiVs~~~~~~ 253 (526)
|.+. +++.+++++++.|+.+||||||++... .+++++|+++ ...|++|+++|||.+... +++.|+|+...+..
T Consensus 92 V~~~-dg~~~~a~vv~~d~~~DlAlLkv~~~~---~~~~~~l~~s~~~~~G~~v~aiG~P~g~~~-~vt~G~vs~~~~~~ 166 (245)
T 3sti_A 92 IQLN-DGREFDAKLIGSDDQSDIALLQIQNPS---KLTQIAIADSDKLRVGDFAVAVGNPFGLGQ-TATSGIVSALGRSG 166 (245)
T ss_dssp EECT-TSCEEEEEEEEEETTTTEEEEEESSCC---SCCCCCBCCGGGCCTTBEEEEEECGGGSCC-EEEEEEEEECSSCS
T ss_pred EEEC-CCCEEEEEEEEecCCCCEEEEEeccCC---CCceeeecCcCCCCCCCEEEEEECCCCCCC-cEEeeEEeeecccc
Confidence 9997 899999999999999999999998654 6788899864 367999999999999776 89999999887642
Q ss_pred ccCCceeeeEEEEcccCCCCCCCCeeecCCCeEEEEEeeccccC-ccccccccccHHHHHHHHHHHHHcCceeeccc
Q 009784 254 YVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHE-DVENIGYVIPTPVIMHFIQDYEKNGAYTGFPL 329 (526)
Q Consensus 254 ~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VVGI~~~~~~~~-~~~~~~~aIP~~~i~~~l~~l~~~g~~~~~~~ 329 (526)
.. ......+|++|+.+++|||||||||.+|+||||+++.+... +..+++||||++.+++++++|+++|++. ++|
T Consensus 167 ~~-~~~~~~~i~tda~i~~G~SGGPLvn~~G~vVGI~s~~~~~~~~~~g~~faIP~~~~~~~~~~l~~~g~~~-~~~ 241 (245)
T 3sti_A 167 LN-LEGLENFIQTDASINRGNSGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIL-EHH 241 (245)
T ss_dssp SC-CTTCSSCEEESSCCCTTTTTSEEECTTSCEEEEEECCC------CCCEEEEEHHHHHHHHHHHHHHHHHC----
T ss_pred cC-CCCccCEEEEcCCcCCCcchhHeecCCCeEEEEEEeEECCCCCcceEEEEEeHHHHHHHHHHHHHcCCCC-Ccc
Confidence 21 12233479999999999999999999999999999877543 4468999999999999999999988876 443
No 12
>1l1j_A Heat shock protease HTRA; hydrolase, serine proteinase; 2.80A {Thermotoga maritima} SCOP: b.47.1.1
Probab=100.00 E-value=4.6e-33 Score=273.83 Aligned_cols=214 Identities=28% Similarity=0.379 Sum_probs=160.5
Q ss_pred ChhhhhhhcccCCCeEEEEeeeeCCCCC-----Ccccc----C-----CCc-ceEEEEEEEe-CCEEEecccccCCCCeE
Q 009784 111 VEPGVARVVPAMDAVVKVFCVHTEPNFS-----LPWQR----K-----RQY-SSSSSGFAIG-GRRVLTNAHSVEHYTQV 174 (526)
Q Consensus 111 ~~~~v~~~~~~~~SVV~I~~~~~~~~~~-----~P~~~----~-----~~~-~~~GSGfvI~-~g~ILT~aHvV~~~~~i 174 (526)
+.+.++++.+ |||+|.+........ .||.. . ... .+.||||+|+ +||||||+||+.++..+
T Consensus 6 ~~~~~~~~~p---sVV~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsG~iI~~~g~ILTnaHvv~~~~~i 82 (239)
T 1l1j_A 6 IVNVVEACAP---AVVKIDVVKTVKTSFFDPYFEQFFKKWFGELPPGFERQVASLGSGFIFDPEGYILTNYHVVGGADNI 82 (239)
T ss_dssp HHHHHHHHGG---GEEEEEEECC--CCCCCHHHHHHHHHHCTTSCTTHHHHEEEEEEEEEEETTTEEEEEHHHHSSCSSC
T ss_pred HHHHHHHhCC---CEEEEEEEEeecccccccccchhhhhhccccccccccccCceEEEEEEeCCCEEEEChHHhCCCCEE
Confidence 3445555555 999999876432211 12211 0 112 5789999999 58999999999999999
Q ss_pred EEEEcCCCcEEEEEEEEeccCCCeEEEEecccccccCceeeecCCC--CcCCCcEEEEeeCCCCCceeEEEEEEeceeee
Q 009784 175 KLKKRGSDTKYLATVLAIGTECDIAMLTVEDDEFWEGVLPVEFGEL--PALQDAVTVVGYPIGGDTISVTSGVVSRIEIL 252 (526)
Q Consensus 175 ~V~~~~~g~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~pl~l~~~--~~~g~~V~~iG~p~~~~~~sv~~GiVs~~~~~ 252 (526)
.|++. +++.+++++++.|+.+||||||++.+. ..+++++|+++ ...|++|+++|||.+... +++.|+|+...+.
T Consensus 83 ~V~~~-~g~~~~a~vv~~d~~~DlAllkl~~~~--~~~~~~~l~~s~~~~~G~~v~~iG~p~g~~~-~vt~Givs~~~r~ 158 (239)
T 1l1j_A 83 TVTML-DGSKYDAEYIGGDEELDIAVIKIKASD--KKFPYLEFGDSDKVKIGEWAIAIGNPLGFQH-TVTVGVVSATNRR 158 (239)
T ss_dssp EEECT-TSCEEEBCCCEEETTTTEEEEEBCCSS--SCCCCCEECCGGGCCTTCEEEEEECTTSSSC-EEEEEEEEEEEEE
T ss_pred EEEEC-CCCEEEEEEEEEcCCCCEEEEEEcCCC--CCCceEEecCccCCccccEEEEEECCCCCCC-cEEEEEEeccccc
Confidence 99997 899999999999999999999999752 26788999875 367999999999998765 8999999988765
Q ss_pred eccCC--ceeeeEEEEcccCCCCCCCCeeecCCCeEEEEEeeccccCccccccccccHHHHHHHHHHHHHcCceeecccc
Q 009784 253 SYVHG--STELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEKNGAYTGFPLL 330 (526)
Q Consensus 253 ~~~~~--~~~~~~i~~da~i~~G~SGGPlvn~~G~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~g~~~~~~~L 330 (526)
..... .....+||+|+.+++|||||||+|.+|+||||+++.....+..+++|+||++.+++++++|+++|++. |+||
T Consensus 159 ~~~~~~~~~~~~~i~tda~i~~G~SGGPLv~~~G~vvGI~s~~~~~~~~~g~~faIP~~~~~~~~~~l~~~g~v~-r~~l 237 (239)
T 1l1j_A 159 IPKPDGSGYYVGLIQTDAAINPGNSGGPLLNIHGEVIGINTAIVNPQEAVNLGFAIPINTVKKFLDTILTQKKVE-KAYL 237 (239)
T ss_dssp EECTTSSCEEEEEEEESSCCCTTTTTSEEECSSSEEEEEECCCSCCCSCCSCEEEEEHHHHHHHHGGGCC----------
T ss_pred cccCCCccccCCEEEECCCCCCCCccHHhccCCCeEEEEEeeeecCCCcCceEEEEEHHHHHHHHHHHHHCCCCc-ccee
Confidence 22111 12446899999999999999999999999999998775223468999999999999999999999998 9999
Q ss_pred Cc
Q 009784 331 GV 332 (526)
Q Consensus 331 Gi 332 (526)
|+
T Consensus 238 Gv 239 (239)
T 1l1j_A 238 GV 239 (239)
T ss_dssp --
T ss_pred Cc
Confidence 96
No 13
>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A
Probab=99.97 E-value=6.8e-31 Score=257.98 Aligned_cols=205 Identities=24% Similarity=0.369 Sum_probs=167.3
Q ss_pred ChhhhhhhcccCCCeEEEEeeeeCCCCCCccccCCCcceEEEEEEEe-CCEEEecccccCCCCeEEEEEcCCCcEEEEEE
Q 009784 111 VEPGVARVVPAMDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFAIG-GRRVLTNAHSVEHYTQVKLKKRGSDTKYLATV 189 (526)
Q Consensus 111 ~~~~v~~~~~~~~SVV~I~~~~~~~~~~~P~~~~~~~~~~GSGfvI~-~g~ILT~aHvV~~~~~i~V~~~~~g~~~~a~v 189 (526)
+.+.++++.+ |||+|........ |.......+.||||+|+ +||||||+||+.+...+.|.+. +++.+++++
T Consensus 22 ~~~~~~~~~~---sVV~I~~~~~~~~----~~~~~~~~~~GsG~ii~~~G~IlTaaHvv~~~~~~~V~~~-~g~~~~a~v 93 (237)
T 3lgi_A 22 YNLAVRRAAP---AVVNVYNRGLNTN----SHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQ-DGRVFEALL 93 (237)
T ss_dssp CHHHHHHHGG---GEEEEEEECCTTT----CTTSCCEEEEEEEEEEETTTEEEEEHHHHTTCSEEEEECT-TSCEEEEEE
T ss_pred HHHHHHHhCC---cEEEEEEEecccC----cccccccceEEEEEEEeCCCEEEEeeeecCCCCEEEEEeC-CCCEEEEEE
Confidence 5566667766 9999998765432 22334456789999999 6799999999999999999997 899999999
Q ss_pred EEeccCCCeEEEEecccccccCceeeecCCC--CcCCCcEEEEeeCCCCCceeEEEEEEeceeeeeccCCceeeeEEEEc
Q 009784 190 LAIGTECDIAMLTVEDDEFWEGVLPVEFGEL--PALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQID 267 (526)
Q Consensus 190 v~~d~~~DlAlLkv~~~~~~~~~~pl~l~~~--~~~g~~V~~iG~p~~~~~~sv~~GiVs~~~~~~~~~~~~~~~~i~~d 267 (526)
++.|+.+||||||++... .+++++|+++ ...|+.|+++|||.+... +++.|+|+...+..... .....++++|
T Consensus 94 v~~d~~~DlAll~l~~~~---~~~~~~l~~~~~~~~G~~v~~~G~p~~~~~-~~~~g~vs~~~~~~~~~-~~~~~~i~~d 168 (237)
T 3lgi_A 94 VGSDSLTDLAVLKINATG---GLPTIPINARRVPHIGDVVLAIGNPYNLGQ-TITQGIISATGRIGLNP-TGRQNFLQTD 168 (237)
T ss_dssp EEEETTTTEEEEECCCSS---CCCCCCCCTTCCCCTTBEEEEEECGGGSCS-EEEEEEEEEECCSSCCT-TSCSCCEEEC
T ss_pred EEEcCCCCEEEEEecCCC---CCceEeccCcccCCCCCEEEEEECCCCCCC-cEEEEEEEecccccccC-CCcCCEEEEc
Confidence 999999999999999764 4788888753 467899999999998765 79999999877543322 2233568999
Q ss_pred ccCCCCCCCCeeecCCCeEEEEEeeccccC----ccccccccccHHHHHHHHHHHHHcCceeeccc
Q 009784 268 AAINSGNSGGPAFNDKGKCVGIAFQSLKHE----DVENIGYVIPTPVIMHFIQDYEKNGAYTGFPL 329 (526)
Q Consensus 268 a~i~~G~SGGPlvn~~G~VVGI~~~~~~~~----~~~~~~~aIP~~~i~~~l~~l~~~g~~~~~~~ 329 (526)
+.+++|+|||||+|.+|+||||++..+... ...+++||||++.+++++++|+++|++. +++
T Consensus 169 ~~i~~G~SGGPlv~~~G~vvGI~s~~~~~~~~~~~~~g~~~aip~~~i~~~~~~l~~~g~~~-~~~ 233 (237)
T 3lgi_A 169 ASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVI-RHH 233 (237)
T ss_dssp SCCCTTCTTCEEECTTCCEEEEECCCCCCCTTSCCCCSCEEEEEHHHHHHHHHHHHHHSSCC-C--
T ss_pred CccCCCCchHHeeCCCCeEEEEEeeeeccCCCCcCcCceEEEEEHHHHHHHHHHHHHcCCCC-Cch
Confidence 999999999999999999999998876542 2467899999999999999999999987 444
No 14
>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A
Probab=99.97 E-value=1.6e-29 Score=247.31 Aligned_cols=193 Identities=26% Similarity=0.448 Sum_probs=154.7
Q ss_pred ChhhhhhhcccCCCeEEEEeeeeCCCCCCccccCCCcceEEEEEEEe-CCEEEecccccCCCCeEEEEEcCCCcEEEEEE
Q 009784 111 VEPGVARVVPAMDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFAIG-GRRVLTNAHSVEHYTQVKLKKRGSDTKYLATV 189 (526)
Q Consensus 111 ~~~~v~~~~~~~~SVV~I~~~~~~~~~~~P~~~~~~~~~~GSGfvI~-~g~ILT~aHvV~~~~~i~V~~~~~g~~~~a~v 189 (526)
+.+.++++.+ |||+|...... ||.......+.||||+|+ +||||||+||+.+...+.|.+. +++.+.+++
T Consensus 33 ~~~~~~~~~~---sVV~I~~~~~~-----~~~~~~~~~~~GSG~iI~~~G~VLTaaHvv~~~~~i~V~~~-~g~~~~a~v 103 (231)
T 3tjo_A 33 IADVVEKIAP---AVVHIELFRKL-----PFSKREVPVASGSGFIVSEDGLIVTNAHVVTNKHRVKVELK-NGATYEAKI 103 (231)
T ss_dssp HHHHHHHHGG---GEEEEEEEEEC-----TTSSCEEEEEEEEEEECSTTCEEEEETTTCCSSSEEEEECT-TSCEEEEEE
T ss_pred HHHHHHHhcC---cEEEEEEEecc-----ccCCCccccceEEEEEEeCCCEEEEchhcccCCceEEEEcC-CCCEEEEEE
Confidence 4555666666 99999987642 344433444789999999 6799999999999999999997 899999999
Q ss_pred EEeccCCCeEEEEecccccccCceeeecCCC--CcCCCcEEEEeeCCCCCceeEEEEEEeceeeeeccCC--ceeeeEEE
Q 009784 190 LAIGTECDIAMLTVEDDEFWEGVLPVEFGEL--PALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHG--STELLGLQ 265 (526)
Q Consensus 190 v~~d~~~DlAlLkv~~~~~~~~~~pl~l~~~--~~~g~~V~~iG~p~~~~~~sv~~GiVs~~~~~~~~~~--~~~~~~i~ 265 (526)
+..|+.+||||||++.+. .++++.|+++ ...|+.|+++|||.+... +++.|+|+...+.....+ .....+++
T Consensus 104 ~~~d~~~DlAlL~l~~~~---~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~-~~~~g~vs~~~~~~~~~~~~~~~~~~i~ 179 (231)
T 3tjo_A 104 KDVDEKADIALIKIDHQG---KLPVLLLGRSSELRPGEFVVAIGSPFSLQN-TVTTGIVSTTQRGGKELGLRNSDMDYIQ 179 (231)
T ss_dssp EEEETTTTEEEEECCCSS---CCCCCCBCCGGGCCTTCEEEEEEEEETTEE-EEEEEEEEECC-------------CCEE
T ss_pred EEecCCCCEEEEEecCCC---CCCceecCCcCCCCCCCEEEEEECCCCCCC-ceeeEEEeeccccccccccCCCcccEEE
Confidence 999999999999999754 5788888754 356899999999998765 789999998765322111 12235789
Q ss_pred EcccCCCCCCCCeeecCCCeEEEEEeeccccCccccccccccHHHHHHHHHHHHH
Q 009784 266 IDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEK 320 (526)
Q Consensus 266 ~da~i~~G~SGGPlvn~~G~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 320 (526)
+|+.+++|+|||||+|.+|+||||++... ..+++||||++.++++|+++++
T Consensus 180 ~da~i~~G~SGGPLv~~~G~vVGI~s~~~----~~g~~~aip~~~i~~~l~~~~~ 230 (231)
T 3tjo_A 180 TDAIINYGNAGGPLVNLDGEVIGINTLKV----TAGISFAIPSDKIKKFLTESHD 230 (231)
T ss_dssp ESSCCCTTTTTSEEECTTSCEEEEEEEEE----ETTEEEEEEHHHHHHHHHHHHT
T ss_pred EcCCcCCCCchhHeecCCCeEEEEEeEEe----cCCeEEEEEHHHHHHHHHHHhh
Confidence 99999999999999999999999998865 3579999999999999999874
No 15
>3k6y_A Serine protease, possible membrane-associated serine protease; oxidative stress, disulfide, BENT helix, HY protease; 1.30A {Mycobacterium tuberculosis} PDB: 3k6z_A 3lt3_A
Probab=99.95 E-value=1.3e-26 Score=227.27 Aligned_cols=190 Identities=27% Similarity=0.391 Sum_probs=151.6
Q ss_pred hhhhhhcccCCCeEEEEeeeeCCCCCCccccCCCcceEEEEEEEeCCEEEecccccCCCCeEEEEEcCCCcEEEEEEEEe
Q 009784 113 PGVARVVPAMDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAI 192 (526)
Q Consensus 113 ~~v~~~~~~~~SVV~I~~~~~~~~~~~P~~~~~~~~~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~~g~~~~a~vv~~ 192 (526)
+.++++.+ |||+|...... ....+.||||+|+++|||||+||+.+...+.|.+. + ..+.++++..
T Consensus 35 ~~~~~~~~---svV~I~~~~~~----------~~~~~~GsG~iI~~~~VlTaaH~v~~~~~~~V~~~-~-~~~~~~~v~~ 99 (237)
T 3k6y_A 35 PVVAATEP---SVVKIRSLAPR----------CQKVLEGTGFVISPDRVMTNAHVVAGSNNVTVYAG-D-KPFEATVVSY 99 (237)
T ss_dssp HHHHHHGG---GEEEEEEEEGG----------GTEEEEEEEEEEETTEEEECGGGTTTCSEEEEEET-T-EEEECEEEEE
T ss_pred HHHHHhcC---CEEEEEEEecC----------CCcceeEEEEEEECCEEEECHHHcCCCceEEEEEC-C-cEEEEEEEEE
Confidence 34555555 99999986521 23457899999999999999999999999999996 4 5889999999
Q ss_pred ccCCCeEEEEecccccccCceeeecCC-CCcCCCcEEEEeeCCCCCceeEEEEEEeceeeee----ccCCc-eeeeEEEE
Q 009784 193 GTECDIAMLTVEDDEFWEGVLPVEFGE-LPALQDAVTVVGYPIGGDTISVTSGVVSRIEILS----YVHGS-TELLGLQI 266 (526)
Q Consensus 193 d~~~DlAlLkv~~~~~~~~~~pl~l~~-~~~~g~~V~~iG~p~~~~~~sv~~GiVs~~~~~~----~~~~~-~~~~~i~~ 266 (526)
|+.+||||||++.. .+++++|++ ....|+.++++|||.+... +.+.|.++...... +..+. ....++++
T Consensus 100 ~~~~DiAll~l~~~----~~~~~~l~~~~~~~G~~v~v~G~p~g~~~-~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (237)
T 3k6y_A 100 DPSVDVAILAVPHL----PPPPLVFAAEPAKTGADVVVLGYPGGGNF-TATPARIREAIRLSGPDIYGDPEPVTRDVYTI 174 (237)
T ss_dssp ETTTTEEEEECTTC----CSCCCCBCSSCCCTTCEEEEEECGGGCSC-EEEEEEEEEEEEEEECCTTCCSSCEEEEEEEE
T ss_pred cCCCCEEEEEeCCC----CCCceecCCCCCCCCCEEEEEECCCCCCC-ccceeEEEeeEeecccccccCCCcccccEEEe
Confidence 99999999999943 578888863 4467999999999988765 67788877654322 11222 34457899
Q ss_pred cccCCCCCCCCeeecCCCeEEEEEeeccccCccccccccccHHHHHHHHHHHHHcCce
Q 009784 267 DAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEKNGAY 324 (526)
Q Consensus 267 da~i~~G~SGGPlvn~~G~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~g~~ 324 (526)
++.+++|+|||||+|.+|+||||+++... +..+++|+||++.++++++++.....+
T Consensus 175 ~~~~~~GdSGGPLv~~~G~vvGI~s~~~~--~~~~~~~aip~~~v~~~l~~~~~~~~v 230 (237)
T 3k6y_A 175 RADVEQGDSGGPLIDLNGQVLGVVFGAAI--DDAETGFVLTAGEVAGQLAKIGATQPV 230 (237)
T ss_dssp ESCCCTTCTTCEEECTTSCEEEEEEEECS--SSTTEEEEEEHHHHHGGGGGTTCCSCC
T ss_pred cCccCCCccHHHEECCCCEEEEEEEeecc--CCCcEEEEEEHHHHHHHHHHccCCCCC
Confidence 99999999999999999999999988662 345789999999999999999554444
No 16
>2w5e_A Putative serine protease; coiled coil, transmembrane, thiol protease, RNA replication, ribosomal frameshifting, catalytic triad, membrane; 2.00A {Human astrovirus 1}
Probab=99.90 E-value=6.2e-23 Score=189.73 Aligned_cols=136 Identities=25% Similarity=0.310 Sum_probs=105.2
Q ss_pred ceEEEEEEEeCCEEEecccccCCCCeEEEEEcCCCcEEEEEEEEeccCCCeEEEEecccccccCceeeecCCCCcCCCcE
Q 009784 148 SSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIGTECDIAMLTVEDDEFWEGVLPVEFGELPALQDAV 227 (526)
Q Consensus 148 ~~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~~g~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~pl~l~~~~~~g~~V 227 (526)
.+.||||+| +||||||+|||+++..++|++ +++.++++++ .|+..||||||++... .++.+++|+++... +.|
T Consensus 20 ~~~GSGfii-~g~IlTn~HVV~~~~~i~V~~--dg~~~~a~vv-~d~~~DlAlLkv~~~~--~~~~~l~l~~~~~~-~~v 92 (163)
T 2w5e_A 20 EGKGTGFFS-GNDIVTAAHVVGNNTFVNVCY--EGLMYEAKVR-YMPEKDIAFITCPGDL--HPTARLKLSKNPDY-SCV 92 (163)
T ss_dssp TEEEEEEEE-TTEEEEEHHHHTTCSEEEEEE--TTEEEEEEEE-ECCSSSEEEEECCTTC--CCSCCCCBCSSCCT-TEE
T ss_pred ceeEEEEEE-CCEEEecHHHhCCCceEEEEE--CCEEEEEEEE-EECCCCEEEEEecCCC--CCcceEEcCCCCCC-CEE
Confidence 378999999 999999999999999999998 7899999999 8999999999999754 24566778876554 789
Q ss_pred EEEeeCCCCCceeEEEEEEeceeeeeccCCceeeeEEEEcccCCCCCCCCeeecCCCeEEEEEeeccccCcccccccccc
Q 009784 228 TVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIP 307 (526)
Q Consensus 228 ~~iG~p~~~~~~sv~~GiVs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VVGI~~~~~~~~~~~~~~~aIP 307 (526)
+++|+|.+.-..+...+.+ .+ ..++.++.+++|||||||||.+|+||||+++.. +..+ +|+|.
T Consensus 93 ~~~G~p~~~~~~s~~~~~~---------~g----~~~~~~a~i~pGnSGGPl~n~~G~VVGI~~~~~---g~~g-g~ai~ 155 (163)
T 2w5e_A 93 TVMAYVNEDLVVSTAAAMV---------YG----NTLSYAVRTQDGMSGAPVCDKYCRVLAVHQTNT---GYTG-GAVII 155 (163)
T ss_dssp EEEEEETTEEEEEEEEEEE---------ET----TEEEEECSCSSCCTTCEEECTTSCEEEEEEEEE---TTEE-EEEEC
T ss_pred EEEEeCCCCEEEEEeccEE---------cC----CeEEEEEEeCCCCchhhEEcCCCEEEEEEccCc---cccc-CEEEe
Confidence 9999997621111111111 11 135677999999999999999999999998754 2333 66654
No 17
>2as9_A Serine protease; trypsin-like fold, hydrolase; 1.70A {Staphylococcus aureus}
Probab=99.89 E-value=5.3e-23 Score=197.85 Aligned_cols=182 Identities=26% Similarity=0.455 Sum_probs=140.2
Q ss_pred CCeEEEEeeeeCCCCCCccccCCCcceEEEEEEEeCCEEEecccccCCCC---eEEEEEc---CCCcEEEE-EEEEeccC
Q 009784 123 DAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFAIGGRRVLTNAHSVEHYT---QVKLKKR---GSDTKYLA-TVLAIGTE 195 (526)
Q Consensus 123 ~SVV~I~~~~~~~~~~~P~~~~~~~~~~GSGfvI~~g~ILT~aHvV~~~~---~i~V~~~---~~g~~~~a-~vv~~d~~ 195 (526)
+++|+|.. ...+||+... ....|+||+|+++||||||||+.+.. .+.|.+. .+++.+.+ +++.+|+.
T Consensus 3 ~~~~~i~~-----~~~~P~~v~~-~~~~c~G~lI~~~~VLTaaHcv~~~~~~~~i~v~~~~~~~~g~~~~~~~v~~~~~~ 76 (210)
T 2as9_A 3 KNVTQVKD-----TNNFPYNGVV-SFKDATGFVIGKNTIITNKHVSKDYKVGDRITAHPNGDKGNGGIYKIKSISDYPGD 76 (210)
T ss_dssp CCEEECSC-----TTSTTGGGEE-ECSSCEEEEEETTEEEECHHHHHHCCTTCEEEESCCGGGCCSCEEEEEEEEECSSS
T ss_pred CceEEeec-----CCcCCeEEEE-EeeeEEEEEEeCCEEEECHhHCCccCCCCEEEEEeCcccCCCCEEEEEEEEeCCCC
Confidence 36666633 4567898743 34689999999999999999997543 5766542 26777887 47888899
Q ss_pred CCeEEEEecccc---------cccCceeeecCCCCcCCCcEEEEeeCCCCCc---eeEEEEEEeceeeeeccCCceeeeE
Q 009784 196 CDIAMLTVEDDE---------FWEGVLPVEFGELPALQDAVTVVGYPIGGDT---ISVTSGVVSRIEILSYVHGSTELLG 263 (526)
Q Consensus 196 ~DlAlLkv~~~~---------~~~~~~pl~l~~~~~~g~~V~~iG~p~~~~~---~sv~~GiVs~~~~~~~~~~~~~~~~ 263 (526)
.||||||++... +...++++.+.+....|+.++++|||.+... ..++.|+|+... ..+
T Consensus 77 ~DiAll~l~~~~~~~~~~~~~~~~~v~~i~l~~~~~~g~~v~v~G~p~~~~~~~~l~~~~g~v~~~~----------~~~ 146 (210)
T 2as9_A 77 EDISVMNIEEQAVERGPKGFNFNENVQAFNFAKDAKVDDKIKVIGYPLPAQNSFKQFESTGTIKRIK----------DNI 146 (210)
T ss_dssp SSCEEEEECSEEEEEETTEEEGGGSCCCCCBCSCCCTTCEEEEEECSSTTTTTSCCEEEEEEEEEEE----------TTE
T ss_pred CcEEEEEecCccccccccccccccccceeecCCCCCCCCEEEEEeCCCCCCCCcceEEeeeEEcccc----------CCe
Confidence 999999998732 2234678888765677999999999986432 245778887652 125
Q ss_pred EEEcccCCCCCCCCeeecCCCeEEEEEeeccccCccccccccccHHHHHHHHHHHHH
Q 009784 264 LQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEK 320 (526)
Q Consensus 264 i~~da~i~~G~SGGPlvn~~G~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 320 (526)
+++++.+++|+|||||+|.+|+||||++.+....+..+.+|++|.+.|++|++...+
T Consensus 147 i~~~~~~~~GdSGGPlv~~~g~lvGI~s~g~~~~~~~~~~~~~~~~~i~~f~~~~~~ 203 (210)
T 2as9_A 147 LNFDAYIEPGNSGSPVLNSNNEVIGVVYGGIGKIGSEYNGAVYFTPQIKDFIQKHIE 203 (210)
T ss_dssp EEEECCCCTTCTTCEEECTTSCEEEEECCSCCCTTCSSEEEEECCHHHHHHHHTTCC
T ss_pred EEEcCccCCCCccCcEECCCCeEEEEEecccccCCccccccEEEcHHHHHHHHHhhh
Confidence 788999999999999999899999999988765555677899999999999988753
No 18
>2w7s_A Serine protease SPLA; hydrolase, family S1; 1.80A {Staphylococcus aureus} PDB: 2w7u_A
Probab=99.82 E-value=2.3e-20 Score=177.61 Aligned_cols=173 Identities=23% Similarity=0.406 Sum_probs=123.9
Q ss_pred CCCCCCccccCCCcceEEEEEEEeCCEEEecccccCCCCe----EEEEEc---CCCcEEEE-EEEEeccCCCeEEEEecc
Q 009784 134 EPNFSLPWQRKRQYSSSSSGFAIGGRRVLTNAHSVEHYTQ----VKLKKR---GSDTKYLA-TVLAIGTECDIAMLTVED 205 (526)
Q Consensus 134 ~~~~~~P~~~~~~~~~~GSGfvI~~g~ILT~aHvV~~~~~----i~V~~~---~~g~~~~a-~vv~~d~~~DlAlLkv~~ 205 (526)
.....+||+.... ...|+||+|+++||||||||+.+... +.+... .+++.+.+ +++.+|+.+||||||++.
T Consensus 8 ~~~~~~P~~v~~~-~~~c~G~lI~~~~VLTaaHcv~~~~~~~~~v~v~~~~~~~~~~~~~~~~i~~~~~~~DiAll~l~~ 86 (200)
T 2w7s_A 8 TDATKEPYNSVVA-FVGGTGVVVGKNTIVTNKHIAKSNDIFKNRVSAHHSSKGKGGGNYDVKDIVEYPGKEDLAIVHVHE 86 (200)
T ss_dssp SCTTSTTGGGEEE-ETTEEEEEEETTEEEECHHHHHHHHHTTCCEEETCCSSSCCCCEECEEEEEECSSSSSCEEEEECS
T ss_pred eccccCCcccccc-cceEEEEEEECCEEEEChhhcCCcccCCcEEEEEecCccCCCcEEEEEEEecCCCcceEEEEEECC
Confidence 3456789988543 35799999999999999999975433 555431 25677776 577888899999999987
Q ss_pred c-----ccccCceeeecCCCCcCCCcEEEEeeCCCCCc---eeEEEEEEeceeeeeccCCceeeeEEEEcccCCCCCCCC
Q 009784 206 D-----EFWEGVLPVEFGELPALQDAVTVVGYPIGGDT---ISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGG 277 (526)
Q Consensus 206 ~-----~~~~~~~pl~l~~~~~~g~~V~~iG~p~~~~~---~sv~~GiVs~~~~~~~~~~~~~~~~i~~da~i~~G~SGG 277 (526)
+ .+.+.++|+.|.+....|+.++++|||.+... ..++.|+++... ..++++++.+++|+|||
T Consensus 87 ~~~~~~~~~~~v~pi~l~~~~~~g~~v~v~G~p~g~~~~~~~~~~~g~v~~~~----------~~~~~~~~~~~~GdSGG 156 (200)
T 2w7s_A 87 TSTEGLNFNKNVSYTKFADGAKVKDRISVIGYPKGAQTKYKMFESTGTINHIS----------GTFMEFDAYAQPGNSGS 156 (200)
T ss_dssp BCTTSCBGGGSCCCCCBCCCCCTTCEEEEEECTTHHHHTSCEEEEEEEEEEEE----------TTEEEECSCCCTTCTTC
T ss_pred CCCCcccccccccceeccccCCCCCEEEEEECCCCCCCccceEEeEEEEEccC----------CCEEEEcceeCCCCccC
Confidence 4 23345788888765677999999999875322 235778877642 12478899999999999
Q ss_pred eeecCCCeEEEEEeeccccCccccccccc-cHHHHHHHHHHH
Q 009784 278 PAFNDKGKCVGIAFQSLKHEDVENIGYVI-PTPVIMHFIQDY 318 (526)
Q Consensus 278 Plvn~~G~VVGI~~~~~~~~~~~~~~~aI-P~~~i~~~l~~l 318 (526)
||+|.+|++|||++.+... +....+|++ ....++++|++.
T Consensus 157 Pl~~~~g~lvGI~s~g~~~-~~~~~~~~v~~~~~~~~wI~~~ 197 (200)
T 2w7s_A 157 PVLNSKHELIGILYAGSGK-DESEKNFGVYFTPQLKEFIQNN 197 (200)
T ss_dssp EEECTTSCEEEEEEEEC-----CCCEEEEECCHHHHHHHHHT
T ss_pred eEECcCCEEEEEEeccccC-CCCccceeeecHHHHHHHHHhh
Confidence 9999899999999987532 112334444 336667776653
No 19
>1agj_A Epidermolytic toxin A; hydrolase, serine protease; 1.70A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dua_A 1exf_A 1due_A
Probab=99.81 E-value=6.1e-20 Score=180.02 Aligned_cols=160 Identities=23% Similarity=0.369 Sum_probs=114.8
Q ss_pred eEEEEEEEeCCEEEecccccCCCCe--EEEEEcCCC-------------cEEEEEEEEecc---CCCeEEEEecccc---
Q 009784 149 SSSSGFAIGGRRVLTNAHSVEHYTQ--VKLKKRGSD-------------TKYLATVLAIGT---ECDIAMLTVEDDE--- 207 (526)
Q Consensus 149 ~~GSGfvI~~g~ILT~aHvV~~~~~--i~V~~~~~g-------------~~~~a~vv~~d~---~~DlAlLkv~~~~--- 207 (526)
..|+||+|+++||||||||+.+... +.|.+. +| ..+.++.+..|+ .+||||||++.+.
T Consensus 55 ~~c~G~lI~~~~VLTAaHcv~~~~~~~~~v~~~-~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~DiAll~l~~~~~~~ 133 (242)
T 1agj_A 55 TSATGVLIGKNTVLTNRHIAKFANGDPSKVSFR-PSINTDDNGNTETPYGEYEVKEILQEPFGAGVDLALIRLKPDQNGV 133 (242)
T ss_dssp EEEEEEECSSSEEEECHHHHGGGTTCGGGEEEE-ETCEECTTSCEECTTCCEEEEEEESCTTCTTSCCEEEEECCCTTSC
T ss_pred ccEEEEEEeCCEEEEChhhcccCCCCceEEEEe-cCccccccccccccCCceeEEEEEeCCCCCCCcEEEEEEcCCCccc
Confidence 6899999999999999999975432 344442 11 357888888888 8999999999763
Q ss_pred -cccCceeeecCCC--CcCCCcEEEEeeCCCCCceeEEEEEEeceeeeeccCCceeeeEEEEcccCCCCCCCCeeecCCC
Q 009784 208 -FWEGVLPVEFGEL--PALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKG 284 (526)
Q Consensus 208 -~~~~~~pl~l~~~--~~~g~~V~~iG~p~~~~~~sv~~GiVs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G 284 (526)
+...++++.|.+. ...|+.++++|||.+..........+.-.. + . ..+++++.+++|+|||||+|.+|
T Consensus 134 ~~~~~v~~i~L~~~~~~~~g~~~~v~Gwg~~~~~~~l~~~~~~~~~---~----~--~~~~~~~~~c~GdSGGPl~~~~g 204 (242)
T 1agj_A 134 SLGDKISPAKIGTSNDLKDGDKLELIGYPFDHKVNQMHRSEIELTT---L----S--RGLRYYGFTVPGNSGSGIFNSNG 204 (242)
T ss_dssp CHHHHSCCCEECCSTTCCTTCEEEEEECCTTTSTTCCEEEEEEECC---G----G--GSEEEECCCCGGGTTCEEECTTS
T ss_pred cccccccceecCccccCCCCCEEEEEeCCCCCCCccceeeeeeEec---C----C--ceEEEeCCcCCCCCchHhcccCC
Confidence 2234788888753 357899999999987543112222221111 1 0 13677889999999999999899
Q ss_pred eEEEEEeeccccC-ccccccccccHH-HHHHHHHHH
Q 009784 285 KCVGIAFQSLKHE-DVENIGYVIPTP-VIMHFIQDY 318 (526)
Q Consensus 285 ~VVGI~~~~~~~~-~~~~~~~aIP~~-~i~~~l~~l 318 (526)
+||||++.+.... +..+.+|++|++ .++++|++.
T Consensus 205 ~lvGI~s~g~~c~~~~~~~~~~~~i~~~~~~~l~~~ 240 (242)
T 1agj_A 205 ELVGIHSSKVSHLDREHQINYGVGIGNYVKRIINEK 240 (242)
T ss_dssp EEEEEEEEEEECSSTTCEEEEEEECCHHHHHHHHHH
T ss_pred EEEEEEeccccccCcCCCceeeEEehHHHHHHHHhh
Confidence 9999999876422 345678888884 777787764
No 20
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=99.80 E-value=1.1e-20 Score=169.09 Aligned_cols=124 Identities=25% Similarity=0.397 Sum_probs=109.8
Q ss_pred ccccccccHHHHHHHHHHHHHcCceeeccccCceeeeccC--hhHHhhhcCCC-CccceEEEEeCCCCcccCCCCCCcEE
Q 009784 300 ENIGYVIPTPVIMHFIQDYEKNGAYTGFPLLGVEWQKMEN--PDLRVAMSMKA-DQKGVRIRRVDPTAPESEVLKPSDII 376 (526)
Q Consensus 300 ~~~~~aIP~~~i~~~l~~l~~~g~~~~~~~LGi~~~~~~~--~~~~~~lgl~~-~~~Gv~V~~V~~~spA~~GL~~GDvI 376 (526)
+++|||||++.+++++++|.++|++. ++|||++++.+.+ .+.++.+|++. ...|++|.+|.++|||+.||++||+|
T Consensus 2 ~GigFAIP~~~~~~v~~~L~~~G~v~-r~~LGv~~~~~~~~~~~~~~~lgl~~~~~~g~~V~~V~~~spA~aGL~~GD~I 80 (134)
T 2l97_A 2 EGLGFAIPANDAINIIEQLEKNGKVT-RPALGIQMVNLSNVSTSDIRRLNIPSNVTSGVIVRSVQSNMPANGHLEKYDVI 80 (134)
T ss_dssp CCCCCCCCCCCCCCCCCCCCCCCCSS-CCCCCCEEEESSSSCHHHHHHHSSCSSSCSCEEEEECSTTSGGGTTSCSSCEE
T ss_pred CcEEEEeEHHHHHHHHHHHHHcCCEe-eeEeeEEEEECCchhHHHHHHcCCCcCCCCCEEEEEECCCCchHHCCCCCCEE
Confidence 57899999999999999999999998 9999999998843 37888899984 35799999999999998899999999
Q ss_pred EEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEEEEEEEEecccc
Q 009784 377 LSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLATHR 434 (526)
Q Consensus 377 l~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~~~~~v~l~~~~ 434 (526)
++|||++|.++.++. ..+....+|++++|+|+|+|+.+++++++...+
T Consensus 81 ~~inG~~v~~~~~l~----------~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~~ 128 (134)
T 2l97_A 81 TKVDDKEIASSTDLQ----------SALYNHSIGDTIKITYYRNGKEETTSIKLNKLE 128 (134)
T ss_dssp EEETTEECCCHHHHH----------HHHHHSSTTCEEEEEEEETTEEEEEEEECCCC-
T ss_pred EEECCEEcCCHHHHH----------HHHHhCCCCCEEEEEEEECCEEEEEEEEEcccC
Confidence 999999999988764 666666689999999999999999999987654
No 21
>2vid_A Serine protease SPLB; hydrolase; 1.80A {Staphylococcus aureus}
Probab=99.80 E-value=4e-19 Score=169.01 Aligned_cols=174 Identities=26% Similarity=0.441 Sum_probs=122.2
Q ss_pred CCCCCCccccCCCcceEEEEEEEeCCEEEecccccCCCC---eEEEEEc---CCCcEEE-EEEEEeccCCCeEEEEeccc
Q 009784 134 EPNFSLPWQRKRQYSSSSSGFAIGGRRVLTNAHSVEHYT---QVKLKKR---GSDTKYL-ATVLAIGTECDIAMLTVEDD 206 (526)
Q Consensus 134 ~~~~~~P~~~~~~~~~~GSGfvI~~g~ILT~aHvV~~~~---~i~V~~~---~~g~~~~-a~vv~~d~~~DlAlLkv~~~ 206 (526)
.....+||+... ..+.|+||+|+++||||||||+.+.. .+.+... .++..+. .+++..+..+||||||++..
T Consensus 8 ~~~~~~P~~~~~-~~~~c~G~lI~~~~VLTaaHcv~~~~~~~~v~v~~~~~~~~~~~~~~~~i~~~~~~~DiAll~l~~~ 86 (204)
T 2vid_A 8 KDTNIFPYTGVV-AFKSATGFVVGKNTILTNKHVSKNYKVGDRITAHPNSDKGNGGIYSIKKIINYPGKEDVSVIQVEER 86 (204)
T ss_dssp SCTTSTTGGGEE-ECSSCEEEEEETTEEEECHHHHTTCCTTCEEEESCCSSSCCSCEEEEEEEEECSSSSCCEEEEECSE
T ss_pred ccCCcCchhheE-EeeeEEEEEEECCEEEEChhHCCCccCCceEEEEeccccCCCcEEEeeEEecCCCCCeEEEEEEcCc
Confidence 345678998743 33689999999999999999998654 4555321 2455666 56777788899999999863
Q ss_pred c---------cccCceeeecCCCCcCCCcEEEEeeCCCCCc---eeEEEEEEeceeeeeccCCceeeeEEEEcccCCCCC
Q 009784 207 E---------FWEGVLPVEFGELPALQDAVTVVGYPIGGDT---ISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGN 274 (526)
Q Consensus 207 ~---------~~~~~~pl~l~~~~~~g~~V~~iG~p~~~~~---~sv~~GiVs~~~~~~~~~~~~~~~~i~~da~i~~G~ 274 (526)
. +...+.|+.|.+....|+.++++|||.+... .....|.++.... .+++.++.+++|+
T Consensus 87 ~~~~~~~~~~~~~~v~pi~l~~~~~~g~~~~~~G~g~~~~~~~~~~~~~g~v~~~~~----------~~~~~~~~~~~Gd 156 (204)
T 2vid_A 87 AIERGPKGFNFNDNVTPFKYAAGAKAGERIKVIGYPHPYKNKYVLYESTGPVMSVEG----------SSIVYSAHTESGN 156 (204)
T ss_dssp EEEEETTEEEHHHHCCCCCBCSCCCTTCEEEEEECCCCCC--CCCEEEEEEEEEEET----------TEEEECCCCCGGG
T ss_pred ccccccccccccccccccccCCcCCCCCEEEEEeCCCCCCCCcceEeeccEEeeccC----------CeEEEecccCCCC
Confidence 2 1223577888765677999999999986543 2355677765421 2578889999999
Q ss_pred CCCeeecCCCeEEEEEeeccccCccccccccc-cHHHHHHHHHHH
Q 009784 275 SGGPAFNDKGKCVGIAFQSLKHEDVENIGYVI-PTPVIMHFIQDY 318 (526)
Q Consensus 275 SGGPlvn~~G~VVGI~~~~~~~~~~~~~~~aI-P~~~i~~~l~~l 318 (526)
|||||+|.+|++|||++.+.........+|.+ +...+++++++.
T Consensus 157 SGGPl~~~~g~lvGI~s~g~~~~~~~~~~~~~~~~~~~~~wI~~~ 201 (204)
T 2vid_A 157 SGSPVLNSNNELVGIHFASDVKNDDNRNAYGVYFTPEIKKFIAEN 201 (204)
T ss_dssp TTCEEECTTSCEEEEEEEECC---CCCCEEEECCCHHHHHHHHHH
T ss_pred ccCcEECCCCeEEEEEecCccCCCcccccceeEeCHHHHHHHHhh
Confidence 99999999999999999875311123344433 336677777664
No 22
>2h5c_A Alpha-lytic protease; serine protease, acylation transition STAT catalysis, protein folding, protein stability, packing DIST hydrolase; HET: SO4; 0.82A {Lysobacter enzymogenes} SCOP: b.47.1.1 PDB: 1p02_A 1p03_A 1p04_A 1p05_A 1p06_A* 1p01_A 1p11_E 1p12_E 1qrx_A* 1tal_A 2alp_A 1ssx_A* 2h5d_A* 2ull_A 3qgj_A* 9lpr_A 1boq_A 1gbj_A 1gbk_A 1gbl_A ...
Probab=99.78 E-value=5.7e-18 Score=161.45 Aligned_cols=154 Identities=16% Similarity=0.149 Sum_probs=116.9
Q ss_pred EEEEEEEeC---CEEEecccccCCCCeEEEEEcCCCcEEEEEEEEec-cCCCeEEEEecccccccCceee-------ecC
Q 009784 150 SSSGFAIGG---RRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIG-TECDIAMLTVEDDEFWEGVLPV-------EFG 218 (526)
Q Consensus 150 ~GSGfvI~~---g~ILT~aHvV~~~~~i~V~~~~~g~~~~a~vv~~d-~~~DlAlLkv~~~~~~~~~~pl-------~l~ 218 (526)
-.+||++.+ +|||||+||+.+...+. . + ..+.++++..| +..|+||||++.... ..+.+ .+.
T Consensus 17 CT~Gf~v~~~~~~~ilTa~Hc~~~~~~v~---~-~-~~~~g~vv~~~~~~~D~Avi~i~~~~~--~~~~v~~~g~~~~v~ 89 (198)
T 2h5c_A 17 CSVGFSVTRGATKGFVTAGHCGTVNATAR---I-G-GAVVGTFAARVFPGNDRAWVSLTSAQT--LLPRVANGSSFVTVR 89 (198)
T ss_dssp EECCEEEEETTEEEEEECGGGCCTTCEEE---E-T-TEEEEEEEEEECSBSCEEEEEECTTSE--EEEEEEETTEEEECC
T ss_pred CCcCEEEecCCeeEEEECcccCCCCCEEE---e-C-CcEEEEEEecCCCCCCEEEEEeCCCCc--cCceEecCCceEEec
Confidence 346999974 59999999999888776 3 4 47889999999 999999999987531 11222 232
Q ss_pred --CCCcCCCcEEEEeeCCCCCceeEEEEEEeceeeeeccCCceeeeEEEEcccCCCCCCCCeeecCCCeEEEEEeecc-c
Q 009784 219 --ELPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSL-K 295 (526)
Q Consensus 219 --~~~~~g~~V~~iG~p~~~~~~sv~~GiVs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VVGI~~~~~-~ 295 (526)
..+.+|+.|..+|+|.+ ++.|+|+.+++...........++++++.+++|||||||+|.+|++|||+++.. .
T Consensus 90 g~~~~~vG~~V~~~G~~tg-----~t~G~V~~~~~~~~~~~g~~~~~i~t~~~~~~GDSGGPl~~~~g~~vGI~s~~~~~ 164 (198)
T 2h5c_A 90 GSTEAAVGAAVCRSGRTTG-----YQCGTITAKNVTANYAEGAVRGLTQGNACMGRGDSGGSWITSAGQAQGVMSGGNVQ 164 (198)
T ss_dssp BCCCCCTTCEEEEEETTTE-----EEEEEEEEEEEEEEETTEEEEEEEEECSCCBTTCTTCEEECTTCBEEEEEEEECCC
T ss_pred CcccCCCCCeEEEeecCcc-----eEEEEEEeeeeEEEeCCCeEeeeEEecccCCCCcceeEEEeeCCEEEEEEEeecCc
Confidence 34578999999999865 688999988764322222234579999999999999999998999999999873 2
Q ss_pred cC-------ccccccccccHHHHHHHH
Q 009784 296 HE-------DVENIGYVIPTPVIMHFI 315 (526)
Q Consensus 296 ~~-------~~~~~~~aIP~~~i~~~l 315 (526)
.. ...+.+|++|++.+++.+
T Consensus 165 ~~~~~c~~~~~~g~~f~~Pi~~vl~~~ 191 (198)
T 2h5c_A 165 SNGNNCGIPASQRSSLFERLQPILSQY 191 (198)
T ss_dssp TTSBSTTSCGGGCCEEEEEHHHHHHHH
T ss_pred cCCCccccccCCceEEEEEHHHHHHHC
Confidence 11 234689999999887654
No 23
>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme, hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1qy6_A
Probab=99.76 E-value=2.7e-17 Score=164.51 Aligned_cols=160 Identities=23% Similarity=0.335 Sum_probs=117.2
Q ss_pred ceEEEEEEEeCCEEEecccccCCCCe----EEEEEc-------CCCcEEEEEEEEeccCCCeEEEEecccc----cccCc
Q 009784 148 SSSSSGFAIGGRRVLTNAHSVEHYTQ----VKLKKR-------GSDTKYLATVLAIGTECDIAMLTVEDDE----FWEGV 212 (526)
Q Consensus 148 ~~~GSGfvI~~g~ILT~aHvV~~~~~----i~V~~~-------~~g~~~~a~vv~~d~~~DlAlLkv~~~~----~~~~~ 212 (526)
...|+||+|+++||||||||+.+... +.|++. .++.....+++..+..+||||||++... +...+
T Consensus 33 ~~~C~G~lI~~~~VLTAAHCv~~~~~~~~~i~V~~G~~~~~~~~~g~~~~~~i~~~~~~~DIALLkL~~~~~~~~~~~~v 112 (274)
T 2o8l_A 33 TFIASGVVVGKDTLLTNKHVVDATHGDPHALKAFPSAINQDNYPNGGFTAEQITKYSGEGDLAIVKFSPNEQNKHIGEVV 112 (274)
T ss_dssp EEEEEEEEEETTEEEECHHHHHTTTTCGGGEEEEETCCBTTBCTTCCEEEEEEEECSSSSCCEEEEECCCTTSCCTTTSS
T ss_pred CEEEEEEEEECCEEEEChhhCcccCCCcceEEEEecccCcccccCccEEEEEEEeCCCCCcEEEEEecCccccccccccc
Confidence 36899999999999999999976543 777653 1344455677777788999999999763 44568
Q ss_pred eeeecCCC--CcCCCcEEEEeeCCCCCc--eeEEEEEEeceeeeeccCCceeeeEEEEcccCCCCCCCCeeecCCCeEEE
Q 009784 213 LPVEFGEL--PALQDAVTVVGYPIGGDT--ISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVG 288 (526)
Q Consensus 213 ~pl~l~~~--~~~g~~V~~iG~p~~~~~--~sv~~GiVs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VVG 288 (526)
.++.|... ...|+.++++|||.+... .....|+++.... .+++.++.+++|+|||||++.+|+|||
T Consensus 113 ~pi~L~~~~~~~~g~~v~v~Gwg~~~~~~~~~~~~g~i~~~~~----------~~i~~~~~~c~GdSGGPLv~~~g~lvG 182 (274)
T 2o8l_A 113 KPATMSNNAETQTNQNITVTGYPGDKPVATMWESKGKITYLKG----------EAMQYDLSTTGGNSGSPVFNEKNEVIG 182 (274)
T ss_dssp CCCEECCCTTCCTTCEEEEEECCTTSSTTCEEEEEEEEEEEET----------TEEEESCCCCTTCTTCEEECTTSCEEE
T ss_pred ccccccccccccCCCEEEEEECCCCCCCceEEecCceEEecCC----------CeEEeCcccCCCCchhheeccCCeEEE
Confidence 88998754 356899999999976432 2345666664321 257889999999999999998999999
Q ss_pred EEeeccccCccccccccccHHHHHHHHHHHHH
Q 009784 289 IAFQSLKHEDVENIGYVIPTPVIMHFIQDYEK 320 (526)
Q Consensus 289 I~~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 320 (526)
|++.+... ..+.++.+. ..++.+|++..+
T Consensus 183 IvS~G~~~--~~~~~~~~~-~~~~~wI~~~i~ 211 (274)
T 2o8l_A 183 IHWGGVPN--EFNGAVFIN-ENVRNFLKQNIE 211 (274)
T ss_dssp EEEEEETT--TEEEEEECC-HHHHHHHHHHCT
T ss_pred EEeCcccC--CCCceEEec-HHHHHHHHHHHh
Confidence 99887532 223456664 556777766543
No 24
>1wcz_A Glutamyl endopeptidase; virulence factor, hydrolase; 2.00A {Staphylococcus aureus} SCOP: b.47.1.1
Probab=99.74 E-value=3.6e-17 Score=163.13 Aligned_cols=160 Identities=23% Similarity=0.344 Sum_probs=117.2
Q ss_pred ceEEEEEEEeCCEEEecccccCCCC----eEEEEEc-------CCCcEEEEEEEEeccCCCeEEEEecccc----cccCc
Q 009784 148 SSSSSGFAIGGRRVLTNAHSVEHYT----QVKLKKR-------GSDTKYLATVLAIGTECDIAMLTVEDDE----FWEGV 212 (526)
Q Consensus 148 ~~~GSGfvI~~g~ILT~aHvV~~~~----~i~V~~~-------~~g~~~~a~vv~~d~~~DlAlLkv~~~~----~~~~~ 212 (526)
...|+||+|+++||||||||+.+.. .+.|++. .+++...++++..+..+||||||++... +...+
T Consensus 33 ~~~CgG~lI~~~~VLTAAHCv~~~~~~~~~i~V~~G~~~~~~~~~g~~~~~~i~~~~~~~DIALLkL~~~~~~~~~~~~v 112 (268)
T 1wcz_A 33 TFIASGVVVGKDTLLTNKHVVDATHGDPHALKAFPSAINQDNYPNGGFTAEQITKYSGEGDLAIVKFSPNEQNKHIGEVV 112 (268)
T ss_dssp EEEEEEEECSSSEEEECHHHHGGGTTCGGGEEEEETCCBTTBCTTCCEEEEEEEECSSSSCCEEEEECCCTTSCCHHHHS
T ss_pred CEEEEEEEEECCEEEEChhhCCCccCCcceEEEEecccCcccccCCcEEEEEEecCCCCCcEEEEEecCccccccccccc
Confidence 3689999999999999999997543 3777653 1344455677777788999999999763 33457
Q ss_pred eeeecCCC--CcCCCcEEEEeeCCCCCc--eeEEEEEEeceeeeeccCCceeeeEEEEcccCCCCCCCCeeecCCCeEEE
Q 009784 213 LPVEFGEL--PALQDAVTVVGYPIGGDT--ISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVG 288 (526)
Q Consensus 213 ~pl~l~~~--~~~g~~V~~iG~p~~~~~--~sv~~GiVs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VVG 288 (526)
.++.|... ...|+.++++||+.+... .....|+++... ..+++.++.+++|+|||||++.+|+|||
T Consensus 113 ~pi~L~~~~~~~~g~~v~v~Gwg~~~~~~~~~~~~g~i~~~~----------~~~i~~~~~~c~GdSGGPLv~~~g~lvG 182 (268)
T 1wcz_A 113 KPATMSNNAETQVNQNITVTGYPGDKPVATMWESKGKITYLK----------GEAMQYDLSTTGGNSGSPVFNEKNEVIG 182 (268)
T ss_dssp CCCCBCCCSSCCTTCEEEEEECCTTSSTTCEEEEEEEEEEEE----------TTEEEESBCCCTTCTTCEEECTTSCEEE
T ss_pred ceeecccccccCCCCEEEEEECCCCCCCceEEeecceEEeeC----------CCeEEEecccCCCCccCeEEccCCEEEE
Confidence 88888754 356899999999976432 235567766432 1257889999999999999998999999
Q ss_pred EEeeccccCccccccccccHHHHHHHHHHHHH
Q 009784 289 IAFQSLKHEDVENIGYVIPTPVIMHFIQDYEK 320 (526)
Q Consensus 289 I~~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 320 (526)
|++.+... ..+.++.+. ..++.++++..+
T Consensus 183 IvS~G~~~--~~~~~~~~~-~~~~~wI~~~i~ 211 (268)
T 1wcz_A 183 IHWGGVPN--EFNGAVFIN-ENVRNFLKQNIE 211 (268)
T ss_dssp EEEEEETT--TEEEEEECC-HHHHHHHHHHCT
T ss_pred EEeCCccC--CcceeEEcC-HHHHHHHHHHHH
Confidence 99887532 234566665 556777776543
No 25
>1qtf_A Exfoliative toxin B; serine protease, superantigen, hydrolase; 2.40A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dt2_A
Probab=99.73 E-value=4e-18 Score=167.75 Aligned_cols=144 Identities=22% Similarity=0.283 Sum_probs=103.0
Q ss_pred ceEEEEEEEeCCEEEecccccCCCC----eEEEEEcC--C---------CcEEEEEEEEecc---CCCeEEEEecccc--
Q 009784 148 SSSSSGFAIGGRRVLTNAHSVEHYT----QVKLKKRG--S---------DTKYLATVLAIGT---ECDIAMLTVEDDE-- 207 (526)
Q Consensus 148 ~~~GSGfvI~~g~ILT~aHvV~~~~----~i~V~~~~--~---------g~~~~a~vv~~d~---~~DlAlLkv~~~~-- 207 (526)
...|+||+|+++||||||||+.+.. .+.+.... . +..+.++.+..|+ .+||||||++.+.
T Consensus 47 ~~~c~G~lI~~~~VLTAaHcv~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~i~~hp~~~~~DiALLkl~~~~~~ 126 (246)
T 1qtf_A 47 STLATGVLIGKNTIVTNYHVAREAAKNPSNIIFTPAQNRDAEKNEFPTPYGKFEAEEIKESPYGQGLDLAIIKLKPNEKG 126 (246)
T ss_dssp TEEEEEEEEETTEEEECHHHHGGGTTCGGGEEEEETCCCCTTTTCCCCTTCCEEEEEEESCTTCTTSCCEEEEECCCTTS
T ss_pred CceEEEEEEECCEEEECHHhCCCCCCCceEEEEecCccccccccccccCCceEEEEEEEeCCCCCCCCEEEEEEeCCccc
Confidence 4689999999999999999997643 36665531 0 1468888888888 9999999999763
Q ss_pred --cccCceeeecCCC--CcCCCcEEEEeeCCCCCceeEEEEEEeceeeeeccCCceeeeEEEEcccCCCCCCCCeeecCC
Q 009784 208 --FWEGVLPVEFGEL--PALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDK 283 (526)
Q Consensus 208 --~~~~~~pl~l~~~--~~~g~~V~~iG~p~~~~~~sv~~GiVs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~ 283 (526)
+...++++.|++. ...|+.++++|||.+..........+.-. . .+++++.+++|+|||||+|.+
T Consensus 127 ~~~~~~v~~i~L~~~~~~~~g~~v~v~G~p~g~~~~~~~~~~~~~~------~------~~~~~~~~~~GdSGGPlv~~~ 194 (246)
T 1qtf_A 127 ESAGDLIQPANIPDHIDIAKGDKYSLLGYPYNYSAYSLYQSQIEMF------N------DSQYFGYTEVGNSGSGIFNLK 194 (246)
T ss_dssp CCHHHHSCCCCCCSSCCCCTTCEEEEEECCTTTSTTCCEEEEEEES------S------SSBEESCCCGGGTTCEEECTT
T ss_pred cccccceeeeecCCccccCCCCEEEEEECCCCCCCceeEeeeeeec------C------cEEEeCCCCCCCchhheECCC
Confidence 2234788888753 35689999999998754311111111100 0 123466789999999999999
Q ss_pred CeEEEEEeeccccCccccccccccHHH
Q 009784 284 GKCVGIAFQSLKHEDVENIGYVIPTPV 310 (526)
Q Consensus 284 G~VVGI~~~~~~~~~~~~~~~aIP~~~ 310 (526)
|+||||++.+. .+|++|++.
T Consensus 195 g~lvGI~s~g~-------~~~~ipi~~ 214 (246)
T 1qtf_A 195 GELIGIHSGKG-------GQHNLPIGV 214 (246)
T ss_dssp CCEEEEEEEEE-------TTTTEEEEE
T ss_pred CEEEEEEeccc-------cCccccchh
Confidence 99999998754 256777544
No 26
>1hpg_A Glutamic acid specific protease; serine protease, hydrolase-hydrolase inhibitor complex; 1.50A {Streptomyces griseus} SCOP: b.47.1.1
Probab=99.71 E-value=2.3e-16 Score=149.03 Aligned_cols=156 Identities=18% Similarity=0.197 Sum_probs=112.2
Q ss_pred eEEE-EEEEe-C--CEEEecccccCCCCeEEEEEcCCCcEEEEEEEEec-cCCCeEEEEecccccccCceeee-------
Q 009784 149 SSSS-GFAIG-G--RRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIG-TECDIAMLTVEDDEFWEGVLPVE------- 216 (526)
Q Consensus 149 ~~GS-GfvI~-~--g~ILT~aHvV~~~~~i~V~~~~~g~~~~a~vv~~d-~~~DlAlLkv~~~~~~~~~~pl~------- 216 (526)
..|| ||++. + +|||||+||+.+...+.+ . ++....+++...+ +..|+||||++.+.. ..+.+.
T Consensus 12 ~~CT~Gfiv~~~g~~~ilT~~Hv~~~~~~v~~--~-~~~~~~g~~~~~~~~~~DiAlikl~~~~~--~~~~v~~~~g~~~ 86 (187)
T 1hpg_A 12 SRCSAAFNVTKGGARYFVTAGHCTNISANWSA--S-SGGSVVGVREGTSFPTNDYGIVRYTDGSS--PAGTVDLYNGSTQ 86 (187)
T ss_dssp EEEECCEEEEETTEEEEEECHHHHTTCSEEES--S-TTCCEEEEEEEEECSBSCEEEEEECSSCC--CCSEEECSSSCEE
T ss_pred CcCcceEEEEECCeeEEEECcccCCCCCeEEe--C-CCceeEEEEeCccCCCCCEEEEEeCCCCC--cCceEEecCCcee
Confidence 3455 99998 4 499999999998877653 3 5544456666555 788999999987421 112222
Q ss_pred -cC--CCCcCCCcEEEEeeCCCCCceeEEEEEEeceeeeeccCCceeeeEEEEcccCCCCCCCCeeecCCCeEEEEEeec
Q 009784 217 -FG--ELPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQS 293 (526)
Q Consensus 217 -l~--~~~~~g~~V~~iG~p~~~~~~sv~~GiVs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VVGI~~~~ 293 (526)
+. ..+.+|+.|.++|++.+ ++.|+|+.+++...........++|+++.+++|+|||||++. ++++||++..
T Consensus 87 ~i~~~~~~~~G~~v~~~G~~~g-----~t~G~v~~~~~~v~~~~~~~~~~i~t~~~~~~GdSGgpl~~~-~~~vGi~s~~ 160 (187)
T 1hpg_A 87 DISSAANAVVGQAIKKSGSTTK-----VTSGTVTAVNVTVNYGDGPVYNMVRTTACSAGGDSGGAHFAG-SVALGIHSGS 160 (187)
T ss_dssp ECCEECCCCTTCEEEEEETTTE-----EEEEEEEEEEEEEEETTEEEEEEEEECCCCCTTCTTCEEEET-TEEEEEEEEE
T ss_pred eeccccCCCCCCEEEEEEcCCC-----EeEEEEEEeEEEEEeCCCeEeeeEEeccccCCCCCCCeEEEC-CEEEEEEEee
Confidence 22 34578999999999864 678999988764322222344579999999999999999986 5999999886
Q ss_pred cccCccccccccccHHHHHHHH
Q 009784 294 LKHEDVENIGYVIPTPVIMHFI 315 (526)
Q Consensus 294 ~~~~~~~~~~~aIP~~~i~~~l 315 (526)
.......+.+|++|++.+++.+
T Consensus 161 ~~~~~~~~~~~~~~i~~~~~~l 182 (187)
T 1hpg_A 161 SGCSGTAGSAIHQPVTEALSAY 182 (187)
T ss_dssp SCCBTTBCCCEEEEHHHHHHHH
T ss_pred CCCCCCCCceEEEEHHHHHHHc
Confidence 5322234689999998876543
No 27
>2oua_A Serine protease, protein NAPA; kinetic stability, acid stability, electros hydrolase; HET: 2AB; 1.85A {Nocardiopsis alba}
Probab=99.68 E-value=7.4e-16 Score=145.61 Aligned_cols=154 Identities=14% Similarity=0.053 Sum_probs=112.9
Q ss_pred eEEEEEEEe--CC--EEEecccccCCCCeEEEEEcCCCcEEEEEEEEec-cCCCeEEEEeccccc-ccCce------eee
Q 009784 149 SSSSGFAIG--GR--RVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIG-TECDIAMLTVEDDEF-WEGVL------PVE 216 (526)
Q Consensus 149 ~~GSGfvI~--~g--~ILT~aHvV~~~~~i~V~~~~~g~~~~a~vv~~d-~~~DlAlLkv~~~~~-~~~~~------pl~ 216 (526)
.-.+||++. +| |||||+||+.+...+. +. | +.++++..| +..|+||||++.... ...+. +++
T Consensus 14 ~CTsGf~v~~~~G~~~ilTa~Hc~~~g~~v~--~~-d---~~g~v~~~~~p~~DiAlikl~~~~~~~~~v~~~g~~~~~~ 87 (188)
T 2oua_A 14 RCSVGFAATNASGQPGFVTAGHCGSVGTQVS--IG-N---GRGVFERSVFPGNDAAFVRGTSNFTLTNLVSRYNSGGYAT 87 (188)
T ss_dssp EEECCEEEECTTCCEEEEECGGGCCTTCEEE--ET-T---EEEEEEEEECSBSCEEEEEEEESCEEEEEEECGGGCSEEE
T ss_pred cEecCEEEEeCCCCEEEEECcccCCCCCEEE--ec-C---ceEEEEeeCCCCCCEEEEEeCCCCccccceeecCCcceEe
Confidence 345799996 77 9999999998766643 43 4 889999999 999999999987531 11111 123
Q ss_pred cCC--CCcCCCcEEEEeeCCCCCceeEEEEEEeceeeeeccCCceeeeEEEEcccCCCCCCCCeeecCCCeEEEEEeecc
Q 009784 217 FGE--LPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSL 294 (526)
Q Consensus 217 l~~--~~~~g~~V~~iG~p~~~~~~sv~~GiVs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VVGI~~~~~ 294 (526)
+.. .+.+|+.|..+|++.+ ++.|+|+.+++...........+++++..+.+|+|||||++ +|+++||++...
T Consensus 88 l~~~~~~~vG~~v~~~G~~tG-----~t~G~v~~~~~~v~~~~~~~~~~~~~~~~~~~GDSGgpl~~-~~~~vGi~s~~~ 161 (188)
T 2oua_A 88 VSGSSTAPIGSQVCRSGSTTG-----WYCGTIQARNQTVSYPQGTVHSLTRTSVCAEPGDSGGSFIS-GTQAQGVTSGGS 161 (188)
T ss_dssp CCBCCCCCTTCEEEEEETTTE-----EEEEEEEEEEEEEEETTEEEEEEEEESCCCCTTCTTCEEEE-TTEEEEEEEEEE
T ss_pred ccCccCCCCCCeEEEEEcCCC-----eEEEEEEEEeeEEEeCCCcEeeeEeeeeecCCCCccceEEE-CCEEEEEEeccC
Confidence 543 4578999999999865 57899998876432222223356888888899999999995 789999999865
Q ss_pred ccCccccccccccHHHHHHH
Q 009784 295 KHEDVENIGYVIPTPVIMHF 314 (526)
Q Consensus 295 ~~~~~~~~~~aIP~~~i~~~ 314 (526)
......+.+|++|++.+++.
T Consensus 162 ~~~~~~~~~~~~pi~~~l~~ 181 (188)
T 2oua_A 162 GNCRTGGTTFYQEVNPMLNS 181 (188)
T ss_dssp EETTTEEEEEEEESHHHHHH
T ss_pred CCCCCCCceEEEEHHHHHHH
Confidence 32233567999998887654
No 28
>2qa9_E Streptogrisin-B; chymotrypsin-type serine peptidase, second tetrahedral inter tetrapeptide, beta barrels, alpha helix, hydrolase; HET: GOL; 1.18A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sge_E 1sgn_E 1sgy_E 1sgd_E 2nu0_E 2nu1_E 2gkv_E 2nu3_E 2nu4_E 2nu2_E* 2qaa_A* 2sgd_E 2sge_E 2sgf_E 2sgp_E 2sgq_E 3sgq_E 1sgp_E 1cso_E 1ct0_E ...
Probab=99.66 E-value=1.2e-15 Score=143.30 Aligned_cols=160 Identities=18% Similarity=0.206 Sum_probs=111.8
Q ss_pred eEEE-EEEEe---CCEEEecccccCCCCeEEEEEcCCCcEEEEEEEEec-cCCCeEEEEecc-cc-cccCceeeecC--C
Q 009784 149 SSSS-GFAIG---GRRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIG-TECDIAMLTVED-DE-FWEGVLPVEFG--E 219 (526)
Q Consensus 149 ~~GS-GfvI~---~g~ILT~aHvV~~~~~i~V~~~~~g~~~~a~vv~~d-~~~DlAlLkv~~-~~-~~~~~~pl~l~--~ 219 (526)
..|| ||++. ++|||||+||+.+...+.+... ++.. .+++...+ +.+||||||++. +. +...++++.+. .
T Consensus 12 ~~ct~Gf~v~~~~~~~ilTaaHcv~~~~~~~v~~~-~~~~-~g~~~~~~~~~~DiAll~l~~~~~~~~~~v~~~~l~~~~ 89 (185)
T 2qa9_E 12 GRCSLGFNVRSGSTYYFLTAGHCTDGATTWWANSA-RTTV-LGTTSGSSFPNNDYGIVRYTNTTIPKDGTVGGQDITSAA 89 (185)
T ss_dssp CEEECCEEEEETTEEEEEECHHHHTTCSEEESSTT-SCSE-EEEEEEEECSBSCEEEEEECCSSSCCCCEETTEECCEEC
T ss_pred CcEeccEEEEECCceEEEECcccCCCCCcEEecCC-CceE-eEEEeccccCCCCEEEEEecCCCccccCccceeeeCCcc
Confidence 4677 99997 3599999999999888777542 3333 35566667 889999999987 32 23335666665 3
Q ss_pred CCcCCCcEEEEeeCCCCCceeEEEEEEeceeeee-ccCCceeeeEEEEcccCCCCCCCCeeecCCCeEEEEEeeccccCc
Q 009784 220 LPALQDAVTVVGYPIGGDTISVTSGVVSRIEILS-YVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHED 298 (526)
Q Consensus 220 ~~~~g~~V~~iG~p~~~~~~sv~~GiVs~~~~~~-~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VVGI~~~~~~~~~ 298 (526)
.+..|+.++++||+.+ .+.|.++..+... +.........++.+...++|+|||||++. ++++||++.+.....
T Consensus 90 ~~~~g~~v~~~Gw~~~-----~~~g~l~~~~~~v~~~~~~~~~~~~~~~~cac~GDSGGPlv~~-~~~vGI~s~g~~~~~ 163 (185)
T 2qa9_E 90 NATVGMAVTRRGSTTG-----THSGSVTALNATVNYGGGDVVYGMIRTNVCAEPGDSGGPLYSG-TRAIGLTSGGSGNCS 163 (185)
T ss_dssp CCCTTCEEEEEETTTE-----EEEEEEEEEEEEEECSTTCEEEEEEEESCCCCTTCTTCEEEET-TEEEEEEEEEEEETT
T ss_pred cCCCCCEEEEecCCCc-----eeEeEEEEEEEEEEcCCCCEEeceEEecccCCCCCccceEEEC-CEEEEEEEecCCCCC
Confidence 4567999999999753 4567776665332 11111122356777778999999999986 499999998653222
Q ss_pred cccccccccHHHHHHHHH
Q 009784 299 VENIGYVIPTPVIMHFIQ 316 (526)
Q Consensus 299 ~~~~~~aIP~~~i~~~l~ 316 (526)
....+++.|++.++++++
T Consensus 164 ~~~p~vyt~v~~~~~wI~ 181 (185)
T 2qa9_E 164 SGGTTFFQPVTEALSAYG 181 (185)
T ss_dssp TEEEEEEEEHHHHHHHHT
T ss_pred CCCcEEEEEHHHHHHhhC
Confidence 345688999988877663
No 29
>2ea3_A Chymotrypsin; celloulomonas, protease, hydrolase; 1.78A {Cellulomonas bogoriensis}
Probab=99.63 E-value=5.1e-15 Score=139.95 Aligned_cols=149 Identities=17% Similarity=0.192 Sum_probs=108.1
Q ss_pred EEEEEEeCCEEEecccccCCCCeEEEEEcCCCcEEEEEEEEec-cCCCeEEEEeccccc-ccCce-----eeecCC--CC
Q 009784 151 SSGFAIGGRRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIG-TECDIAMLTVEDDEF-WEGVL-----PVEFGE--LP 221 (526)
Q Consensus 151 GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~~g~~~~a~vv~~d-~~~DlAlLkv~~~~~-~~~~~-----pl~l~~--~~ 221 (526)
-+||++++ +||||+||+++...+. .. + +++++.| +..|+||||++.+.. ...+. ++.+.. .+
T Consensus 18 T~Gf~~~~-~ilTa~Hc~~~~~~v~--~~-d-----g~v~~~~~~~~DiAlikl~~~~~~~~~v~~~~g~~v~l~~s~~~ 88 (189)
T 2ea3_A 18 SIGFAVNG-GFITAGHCGRTGATTA--NP-T-----GTFAGSSFPGNDYAFVRTGAGVNLLAQVNNYSGGRVQVAGHTAA 88 (189)
T ss_dssp ECCEEETT-EEEECGGGCCTTCEEE--TT-T-----EEEEEEECSBSCEEEEEECTTCEEEEEEECSSSCEEECCBCCCC
T ss_pred ccCEEccC-eEEEchhcCCCCCEEE--eC-C-----cEEEeeCCCCCCEEEEEECCCCccccceEecCCceeecCCCcCC
Confidence 35898876 9999999999877654 33 3 7888888 899999999987531 11122 334553 45
Q ss_pred cCCCcEEEEeeCCCCCceeEEEEEEeceeeeeccCCceeeeEEEEcccCCCCCCCCeeecCCCeEEEEEeeccccCcccc
Q 009784 222 ALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVEN 301 (526)
Q Consensus 222 ~~g~~V~~iG~p~~~~~~sv~~GiVs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VVGI~~~~~~~~~~~~ 301 (526)
.+|+.|..+|++.+ ++.|+|+.+++...........+++++..+.+|+|||||++ +|+++||++.........+
T Consensus 89 ~vG~~v~~~G~~tG-----~t~G~Vs~~~~~v~~~~~~~~~~~~~~~~~~~GDSGgpl~~-~~~~vGi~s~~~~~c~~~~ 162 (189)
T 2ea3_A 89 PVGSAVCRSGSTTG-----WHCGTITALNSSVTYPEGTVRGLIRTTVCAEPGDSGGSLLA-GNQAQGVTSGGSGNCRTGG 162 (189)
T ss_dssp CTTCEEEEEETTTE-----EEEEEEEEEEEEEEETTEEEEEEEEESCCCCTTCTTCEEEE-TTEEEEEEEEEEEETTTEE
T ss_pred CCCCEEEEEEeCCc-----cEEEEEEecceEEEeCCccCcceEEeeeeccCCCccCeEEE-CCEEEEEEeecCCCCCCCC
Confidence 68999999999865 57788888776432111222347888888999999999997 7999999987642222346
Q ss_pred ccccccHHHHHHH
Q 009784 302 IGYVIPTPVIMHF 314 (526)
Q Consensus 302 ~~~aIP~~~i~~~ 314 (526)
.+|++|++.+++.
T Consensus 163 ~~~~~pi~~~l~~ 175 (189)
T 2ea3_A 163 TTFFQPVNPILQA 175 (189)
T ss_dssp EEEEEEHHHHHHH
T ss_pred cEEEEEHHHHHHH
Confidence 8999998776654
No 30
>1mbm_A NSP4 proteinase, chymotrypsin-like serine protease; serine proteinase, chymotrypsin-like proteinase, collapsed O HOLE, transferase; 2.00A {Equine arteritis virus} SCOP: b.47.1.3
Probab=99.60 E-value=1.9e-15 Score=138.94 Aligned_cols=116 Identities=21% Similarity=0.212 Sum_probs=89.6
Q ss_pred ceEEEEEEEe-CCEEEecccccCCCCeEEEEEcCCCcEEEEEEEEeccCCCeEEEEecccccccCceeeecCCCCcCCCc
Q 009784 148 SSSSSGFAIG-GRRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIGTECDIAMLTVEDDEFWEGVLPVEFGELPALQDA 226 (526)
Q Consensus 148 ~~~GSGfvI~-~g~ILT~aHvV~~~~~i~V~~~~~g~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~pl~l~~~~~~g~~ 226 (526)
.+.||||+|+ ++++||++||+.+.....|+. +|..+. +.+++..|||++++........+++++|++ +.+|+.
T Consensus 14 ~G~GsgF~i~~~g~vVTA~HVv~~~~~~~V~~--~G~~~~---Vgf~~~~DlA~l~v~~~~~~g~~P~l~las-p~vG~a 87 (198)
T 1mbm_A 14 YGTGSVWTRNNEVVVLTASHVVGRANMATLKI--GDAMLT---LTFKKNGDFAEAVTTQSELPGNWPQLHFAQ-PTTGPA 87 (198)
T ss_dssp EEEEEEEEETTEEEEEEEHHHHCTTCEEEEEE--TTEEEE---EECEEETTEEEEEECTTTSCSCCCBCCBCC-CCSEEE
T ss_pred CCccceEEECCCeEEEEeeeEEccCceEEEEE--CCEEEE---eecccCCcEEEEEeeccCCCCCCcccccCC-Ccccce
Confidence 3789999999 789999999999999999998 788887 777899999999994222113567888865 677762
Q ss_pred EEEEeeCCCCCceeEEEEEEeceeeeeccCCceeeeEEEEcccCCCCCCCCeeecCCCeEEEEEee
Q 009784 227 VTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQ 292 (526)
Q Consensus 227 V~~iG~p~~~~~~sv~~GiVs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VVGI~~~ 292 (526)
.+..+.|+++.+.- . ..+++++ .|||||||++|.+ +||||+++
T Consensus 88 -----------~~~~~tG~~~~l~g---~-----~g~l~~t---~PGDSGsPVl~~~-~vIGV~T~ 130 (198)
T 1mbm_A 88 -----------SWCTATGDEEGLLS---G-----EVCLAWT---TSGDSGSAVVQGD-AVVGVHTG 130 (198)
T ss_dssp -----------EEEETTEEEEEEEC---S-----SCEECCC---CGGGTTCEEEETT-EEEEEEEE
T ss_pred -----------EEeeccccEEEEec---C-----CceeEcC---CCCCCCCccccCC-eEEEEEec
Confidence 23455666666541 1 1256677 7999999999998 99999998
No 31
>2pfe_A Protease A, alkaline serine protease, TFPA; beta-barrels, thermophIle, kinetic stabilit thermostability, protein folding; HET: 2AB; 1.44A {Thermobifida fusca}
Probab=99.60 E-value=7.9e-15 Score=138.26 Aligned_cols=151 Identities=17% Similarity=0.158 Sum_probs=108.7
Q ss_pred EE-EEEEEeC---CEEEecccccCCCCeEEEEEcCCCcEEEEEEEEec-cCCCeEEEEeccccc-ccCce-----eeecC
Q 009784 150 SS-SGFAIGG---RRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIG-TECDIAMLTVEDDEF-WEGVL-----PVEFG 218 (526)
Q Consensus 150 ~G-SGfvI~~---g~ILT~aHvV~~~~~i~V~~~~~g~~~~a~vv~~d-~~~DlAlLkv~~~~~-~~~~~-----pl~l~ 218 (526)
.| +||++.+ +|||||+||+++...+.+ +.++++..| +..|+||||++.+.. ...+. ++++.
T Consensus 15 ~CT~Gf~v~~~~~~~ilTa~Hc~~~g~~v~~--------~~g~v~~~~~~~~D~Alikl~~~~~~~~~v~~~~g~~~~i~ 86 (186)
T 2pfe_A 15 RCSIGFSVRQGSQTGFATAGHCGSTGTRVSS--------PSGTVAGSYFPGRDMGWVRITSADTVTPLVNRYNGGTVTVT 86 (186)
T ss_dssp EEECCEEEEETTEEEEEECGGGCCTTCEEBT--------TTEEEEEEECSBSCEEEEEECTTSEEEEEEECSSSCEEECC
T ss_pred cEEeeEEEEcCCeeEEEEChhhCCCCCEEEE--------eeEEEEecCCCCCCEEEEEeCCCcccccceeccCCceEecC
Confidence 44 5999973 599999999998777654 457778887 899999999987531 11111 23343
Q ss_pred --CCCcCCCcEEEEeeCCCCCceeEEEEEEeceeeeeccCCceeeeEEEEcccCCCCCCCCeeecCCCeEEEEEeecccc
Q 009784 219 --ELPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKH 296 (526)
Q Consensus 219 --~~~~~g~~V~~iG~p~~~~~~sv~~GiVs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VVGI~~~~~~~ 296 (526)
..+.+|++|..+|++.+ ++.|+|+.+++...........+++++..+.+|+|||||++ +|+++||++.....
T Consensus 87 ~~~~~~vG~~vc~~G~~tG-----~t~G~vs~~~~tv~~~~~~~~~~~~~~~c~~~GDSGgpl~~-~~~~vGi~s~g~~~ 160 (186)
T 2pfe_A 87 GSQEAATGSSVCRSGATTG-----WRCGTIQSKNQTVRYAEGTVTGLTRTTACAEGGDSGGPWLT-GSQAQGVTSGGTGD 160 (186)
T ss_dssp BCCCCCTTCEEEEEETTTE-----EEEEEEEEEEEEEEETTEEEEEEEEESCCCCTTCTTCEEEE-TTEEEEEEEEEEEE
T ss_pred CCCCCCCCCeEEEEEeCCc-----eEEEEEEEEeeeEEeCCceEeceEeccEEecCCCccCeEEE-CCEEEEEEeecCCC
Confidence 34578999999998865 67899988876532112223346788887889999999996 78999999986522
Q ss_pred CccccccccccHHHHHHH
Q 009784 297 EDVENIGYVIPTPVIMHF 314 (526)
Q Consensus 297 ~~~~~~~~aIP~~~i~~~ 314 (526)
....+.+|++|++.+++.
T Consensus 161 c~~~~~~~~~pi~~~l~~ 178 (186)
T 2pfe_A 161 CRSGGITFFQPINPLLSY 178 (186)
T ss_dssp TTTEEEEEEEEHHHHHHH
T ss_pred CCCCCcEEEEEHHHHHHH
Confidence 233467999998877654
No 32
>2sga_A Proteinase A; hydrolase (serine proteinase); 1.50A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sgc_A 3sga_E* 4sga_E 5sga_E 2sfa_A
Probab=99.58 E-value=9.5e-15 Score=136.81 Aligned_cols=152 Identities=16% Similarity=0.178 Sum_probs=102.1
Q ss_pred eEEE-EEEEe---CCEEEecccccCCCCeEEEEEcCCCcEEEEEEEEeccCCCeEEEEeccccc-ccCceee-----ecC
Q 009784 149 SSSS-GFAIG---GRRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIGTECDIAMLTVEDDEF-WEGVLPV-----EFG 218 (526)
Q Consensus 149 ~~GS-GfvI~---~g~ILT~aHvV~~~~~i~V~~~~~g~~~~a~vv~~d~~~DlAlLkv~~~~~-~~~~~pl-----~l~ 218 (526)
..|| ||+|. ++|||||+||+.+...+.+-.. + ....+..||||||++.+.. ...+.++ .+.
T Consensus 12 ~~ct~G~~v~~~~~~~vlTaaHc~~~~~~~~~G~~-~--------~~~~~~~DiAlikl~~~~~~~~~v~~i~~~~~~~~ 82 (181)
T 2sga_A 12 SRCSLGFNVSVNGVAHALTAGHCTNISASWSIGTR-T--------GTSFPNNDYGIIRHSNPAAADGRVYLYNGSYQDIT 82 (181)
T ss_dssp EEEECCEEEEETTEEEEEECHHHHTTCSEETTEEE-E--------EEECSBSCEEEEEESCGGGCCCEEECSSSCEEECC
T ss_pred CcEeccEEEEECCceEEEECcccCCCCCceeecce-e--------CCcCCCCCEEEEEccCCCcccceEEecCCcceeec
Confidence 4677 99998 3599999999987665533222 1 1223678999999987532 1123332 222
Q ss_pred --CCCcCCCcEEEEeeCCCCCceeEEEEEEeceeeeec-cCCceeeeEEEEcccCCCCCCCCeeecCCCeEEEEEeeccc
Q 009784 219 --ELPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSY-VHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLK 295 (526)
Q Consensus 219 --~~~~~g~~V~~iG~p~~~~~~sv~~GiVs~~~~~~~-~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VVGI~~~~~~ 295 (526)
..+..|+.|.++|++.+ .+.|.++..+.... ..+......++++...++|+|||||++.+ +++||++.+..
T Consensus 83 ~~~~~~~G~~v~~~G~~~~-----~t~G~v~~~~~~v~~~~~~~~~~~i~~~~c~~~GDSGGPlv~~~-~~vGI~s~g~~ 156 (181)
T 2sga_A 83 TAGNAFVGQAVQRSGSTTG-----LRSGSVTGLNATVNYGSSGIVYGMIQTNVCAQPGDSGGSLFAGS-TALGLTSGGSG 156 (181)
T ss_dssp EECCCCTTCEEEEEETTTE-----EEEEEEEEEEEEEECGGGCEEEEEEEESCCCCTTCTTCEEEETT-EEEEEEEEEEE
T ss_pred ccccCCCCCEEEEeecCCC-----ccEEEEEEeEEEEECCCCCEEeeeEecccccCCCCCCCEEEECC-EEEEEEEeeCC
Confidence 34578999999998754 45677776654321 11111234578888888999999999865 99999998653
Q ss_pred cCccccccccccHHHHHHHH
Q 009784 296 HEDVENIGYVIPTPVIMHFI 315 (526)
Q Consensus 296 ~~~~~~~~~aIP~~~i~~~l 315 (526)
.......+|+.|++.+++.+
T Consensus 157 ~~~~~~~~v~~~v~~~~~~l 176 (181)
T 2sga_A 157 NCRTGGTTFYQPVTEALSAY 176 (181)
T ss_dssp ETTTEEEEEEEEHHHHHHHH
T ss_pred CCcCCCceEEEEHHHHHHhc
Confidence 22234578999998876654
No 33
>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG; 0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A 1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A* 1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E 1pqa_A*
Probab=99.48 E-value=5.4e-13 Score=128.72 Aligned_cols=163 Identities=17% Similarity=0.196 Sum_probs=106.6
Q ss_pred eeCCCCCCccccCCC--cceEEEEEEEeCCEEEecccccCCC--CeEEEEEcC-----CCcEEEEEEEEeccC-----CC
Q 009784 132 HTEPNFSLPWQRKRQ--YSSSSSGFAIGGRRVLTNAHSVEHY--TQVKLKKRG-----SDTKYLATVLAIGTE-----CD 197 (526)
Q Consensus 132 ~~~~~~~~P~~~~~~--~~~~GSGfvI~~g~ILT~aHvV~~~--~~i~V~~~~-----~g~~~~a~vv~~d~~-----~D 197 (526)
......++||+.... ....|+|.+|++.+|||+|||+.+. ..+.|.+.. ++..+..+-+..++. +|
T Consensus 5 ~~a~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~hp~y~~~~~D 84 (224)
T 1pq7_A 5 TSASAGDFPFIVSISRNGGPWCGGSLLNANTVLTAAHCVSGYAQSGFQIRAGSLSRTSGGITSSLSSVRVHPSYSGNNND 84 (224)
T ss_dssp EECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECHHHHTTSCGGGEEEEESCSBSSSSSEEECEEEEEECTTCBTTBTC
T ss_pred EECCCCCcCeEEEEEECCCeEEEEEEecCCEEEEcHHccCCCCCCceEEEeCcceecCCCEEEEEEEEEECCCCCCCCCC
Confidence 334455667765432 2367999999999999999999853 457777631 234556666666664 59
Q ss_pred eEEEEecccc-cccCceeeecCC---CCcCCCcEEEEeeCCCCC--------ceeEEEEEEeceeeeeccC-CceeeeEE
Q 009784 198 IAMLTVEDDE-FWEGVLPVEFGE---LPALQDAVTVVGYPIGGD--------TISVTSGVVSRIEILSYVH-GSTELLGL 264 (526)
Q Consensus 198 lAlLkv~~~~-~~~~~~pl~l~~---~~~~g~~V~~iG~p~~~~--------~~sv~~GiVs~~~~~~~~~-~~~~~~~i 264 (526)
|||||++.+. +...+.|+.|.. ....++.+++.||..... ...+...+++...+..... ......++
T Consensus 85 iALl~L~~~~~~~~~v~picL~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~ 164 (224)
T 1pq7_A 85 LAILKLSTSIPSGGNIGYARLAASGSDPVAGSSATVAGWGATSEGGSSTPVNLLKVTVPIVSRATCRAQYGTSAITNQMF 164 (224)
T ss_dssp CEEEEESSCCCCBTTBCCCCBCCTTCCCCTTCEEEEEESCCSSTTCSCCCSBCEEEEEEEECHHHHHHHHCTTTSCTTEE
T ss_pred EEEEEeCCCCcCCCcccceecCCcccCCCCCCEEEEEecCCcCCCCCcccceeeEeEEEEEcHHHhhHhhcCCCCCCCeE
Confidence 9999999763 344578888873 234688999999864321 1123344444433322111 11122345
Q ss_pred EEc-----ccCCCCCCCCeeecCCCeEEEEEeecc
Q 009784 265 QID-----AAINSGNSGGPAFNDKGKCVGIAFQSL 294 (526)
Q Consensus 265 ~~d-----a~i~~G~SGGPlvn~~G~VVGI~~~~~ 294 (526)
+.. ...|.|+|||||+..+|.++||++.+.
T Consensus 165 Ca~~~~~~~~~C~GDSGgPL~~~~g~l~Gi~S~g~ 199 (224)
T 1pq7_A 165 CAGVSSGGKDSCQGDSGGPIVDSSNTLIGAVSWGN 199 (224)
T ss_dssp EECCTTCCCBCCTTCTTCEEECTTCCEEEEEEECS
T ss_pred EeecCCCCCCCCcCCCCcceECcCCeEEEEEEeCC
Confidence 553 367899999999987899999998764
No 34
>1fxy_A Coagulation factor XA-trypsin chimera; protease, chloromethylketone, hydrolase-hydrolase I complex; HET: 0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2
Probab=99.47 E-value=8.9e-13 Score=127.62 Aligned_cols=187 Identities=17% Similarity=0.203 Sum_probs=113.7
Q ss_pred eeeCCCCCCccccCCC---cceEEEEEEEeCCEEEecccccCCCCeEEEEEcCC--------CcEEEEEEEEecc-----
Q 009784 131 VHTEPNFSLPWQRKRQ---YSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGS--------DTKYLATVLAIGT----- 194 (526)
Q Consensus 131 ~~~~~~~~~P~~~~~~---~~~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~~--------g~~~~a~vv~~d~----- 194 (526)
.......++||+.... ....|+|.+|++.||||+|||+.....+.|++... ...+..+.+..++
T Consensus 4 G~~a~~~~~Pw~v~l~~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~ 83 (228)
T 1fxy_A 4 GYNCKDGEVPWQALLINEENEGFCGGTILSEFYILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRFTKE 83 (228)
T ss_dssp CEECCTTSCTTEEEEECTTSCEEEEEEECSSSEEEECGGGTTSCSSCEEEEECSCTTTCCCCEEEEEEEEEEECTTCBTT
T ss_pred CEECCCCCcCcEEEEEcCCCCeeEEEEEeeCCEEEECHHHCCCCCcEEEEECccCccccCCCcEEEEEEEEEECCCCCCC
Confidence 3344556778865332 23579999999999999999998666777776421 1234444455554
Q ss_pred --CCCeEEEEecccc-cccCceeeecCCC-CcCCCcEEEEeeCCCCCc--------eeEEEEEEeceeeeeccCCceeee
Q 009784 195 --ECDIAMLTVEDDE-FWEGVLPVEFGEL-PALQDAVTVVGYPIGGDT--------ISVTSGVVSRIEILSYVHGSTELL 262 (526)
Q Consensus 195 --~~DlAlLkv~~~~-~~~~~~pl~l~~~-~~~g~~V~~iG~p~~~~~--------~sv~~GiVs~~~~~~~~~~~~~~~ 262 (526)
.+||||||++.+. +...+.|+.|... ...++.+++.||...... ..+..-+++...+.....+.....
T Consensus 84 ~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~ 163 (228)
T 1fxy_A 84 TYDFDIAVLRLKTPITFRMNVAPASLPTAPPATGTKCLISGWGNTASSGADYPDELQCLDAPVLSQAKCEASYPGKITSN 163 (228)
T ss_dssp TTBTCCEEEEESSCCCCBTTBCCCCCCSSCCCTTCEEEEEESSCCCSSSCCCCSSCEEEEEEBCCHHHHHHHSTTTCCTT
T ss_pred CCcCcEEEEEECCcccCCCceeccCCCCCCCCCCCEEEEEecCccCCCCCCCCccceEEEEEEeCHHHhHhhcCCCCCCC
Confidence 3699999999763 3456788888753 356889999998653211 112223333322222111111223
Q ss_pred EEEEc-----ccCCCCCCCCeeecCCCeEEEEEeeccccCccccccccccHHHHHHHHHHH
Q 009784 263 GLQID-----AAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDY 318 (526)
Q Consensus 263 ~i~~d-----a~i~~G~SGGPlvn~~G~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l 318 (526)
+++.. ...|.|+|||||+. +|+++||++.+..-.....-+...-+....+++++.
T Consensus 164 ~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~C~~~~~p~vyt~V~~y~~WI~~~ 223 (228)
T 1fxy_A 164 MFCVGFLEGGKDSCQGDSGGPVVC-NGQLQGVVSWGDGCAQKNKPGVYTKVYNYVKWIKNT 223 (228)
T ss_dssp EEEESCTTCSCBCCTTCTTCEEEE-TTEEEEEEEECSSSSBTTBCEEEEEGGGGHHHHHHH
T ss_pred EEEeccCCCCCccccCccccceEE-CCEEEEEEEECCCCCCCCCCEEEEEhHHHHHHHHHH
Confidence 45553 35789999999997 579999998764221112233344444455555544
No 35
>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP: b.47.1.2
Probab=99.46 E-value=2.2e-12 Score=125.19 Aligned_cols=186 Identities=16% Similarity=0.145 Sum_probs=114.1
Q ss_pred eeeCCCCCCccccCCCcceEEEEEEEeCCEEEecccccCCCCeEEEEEcC--------CCcEEEEEEEEecc--------
Q 009784 131 VHTEPNFSLPWQRKRQYSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRG--------SDTKYLATVLAIGT-------- 194 (526)
Q Consensus 131 ~~~~~~~~~P~~~~~~~~~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~--------~g~~~~a~vv~~d~-------- 194 (526)
.......++||+........|+|.+|++.||||+|||+. ..+.|.+.. .+..+..+-+..++
T Consensus 4 G~~a~~~~~Pw~v~l~~~~~CgGsLIs~~~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~ 81 (235)
T 1ton_A 4 GYKCEKNSQPWQVAVINEYLCGGVLIDPSWVITAAHCYS--NNYQVLLGRNNLFKDEPFAQRRLVRQSFRHPDYIPLIVT 81 (235)
T ss_dssp CEECCTTSCTTEEEEESSSEEEEEEEETTEEEECGGGCC--SCCEEEESCSBTTSCCTTCEEECEEEEEECTTCCCC---
T ss_pred CEECCCCCcCcEEEEccCCeEEEEEecCCEEEEcHHhCC--CCcEEEeCcccccCCCCcceEEEEEEEEeCCCCcccccc
Confidence 344456678887754333689999999999999999996 345555531 12233344344443
Q ss_pred ----------CCCeEEEEecccc-cccCceeeecCCC-CcCCCcEEEEeeCCCCC--------ceeEEEEEEeceeeeec
Q 009784 195 ----------ECDIAMLTVEDDE-FWEGVLPVEFGEL-PALQDAVTVVGYPIGGD--------TISVTSGVVSRIEILSY 254 (526)
Q Consensus 195 ----------~~DlAlLkv~~~~-~~~~~~pl~l~~~-~~~g~~V~~iG~p~~~~--------~~sv~~GiVs~~~~~~~ 254 (526)
.+||||||++.+. +...+.|+.|... ...++.+++.||..... ...+..-+++...+...
T Consensus 82 ~~~~~~~~~~~~DIALl~L~~~~~~~~~v~picL~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~ 161 (235)
T 1ton_A 82 NDTEQPVHDHSNDLMLLHLSEPADITGGVKVIDLPTKEPKVGSTCLASGWGSTNPSEMVVSHDLQCVNIHLLSNEKCIET 161 (235)
T ss_dssp -----CCCCSTTCCEEEEESSCCCCCSSCCCCCCCCSCCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEEECGGGCGGG
T ss_pred cccccccCCCcCCEEEEEcCCccccCCcceeeeCCCCCCCCCCEEEEEecCCCCCCCCccCccceEEEEEEeCHHHHHHH
Confidence 3599999998763 4456888888753 35689999999865321 12234445554444332
Q ss_pred cCCceeeeEEEEc-----ccCCCCCCCCeeecCCCeEEEEEeecccc-CccccccccccHHHHHHHHHHHH
Q 009784 255 VHGSTELLGLQID-----AAINSGNSGGPAFNDKGKCVGIAFQSLKH-EDVENIGYVIPTPVIMHFIQDYE 319 (526)
Q Consensus 255 ~~~~~~~~~i~~d-----a~i~~G~SGGPlvn~~G~VVGI~~~~~~~-~~~~~~~~aIP~~~i~~~l~~l~ 319 (526)
........+++.. ...|.|+|||||+. +|.++||++.+... .....-+...-+...++++++..
T Consensus 162 ~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~ 231 (235)
T 1ton_A 162 YKDNVTDVMLCAGEMEGGKDTCAGDSGGPLIC-DGVLQGITSGGATPCAKPKTPAIYAKLIKFTSWIKKVM 231 (235)
T ss_dssp GSTTGGGGEEEEECTTCSCBCCTTCTTCEEEE-TTEEEEEECCCCSSCSCTTCCEEEEEGGGGHHHHHHHH
T ss_pred hcCcCCCCeEeeccCCCCCcCCCCCCccccEE-CCEEEEEEeeCCCCCCCCCCCeEEEEHHHHHHHHHHHH
Confidence 2111122345553 35789999999997 68999999876321 11122234444555556665544
No 36
>3fan_A Non-structural protein; chymotrypsin-like, N-terminal beta-barrels, C-terminal alpha-beta extra domain; 1.90A {Porcine respiratory and reproductivesyndrome virus} PDB: 3fao_A
Probab=99.46 E-value=1.4e-13 Score=128.57 Aligned_cols=117 Identities=20% Similarity=0.226 Sum_probs=79.3
Q ss_pred ceEEEEEEEe-CCEEEecccccCCCCeEEEEEcCCCcEEEEEEEEeccCCCeEEEEecccccccCceeeecCCCCcCCCc
Q 009784 148 SSSSSGFAIG-GRRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIGTECDIAMLTVEDDEFWEGVLPVEFGELPALQDA 226 (526)
Q Consensus 148 ~~~GSGfvI~-~g~ILT~aHvV~~~~~i~V~~~~~g~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~pl~l~~~~~~g~~ 226 (526)
.+.|+||.|+ +++|||++|||.+... .++. ++..+. +.+|+..|+|+++++... ..++.++++.....|..
T Consensus 29 ~GsGt~F~i~g~~~VvTA~HVVg~~~~-vVt~--~g~r~~---~~f~~~~D~All~i~~~~--g~~P~lKlA~~~~~G~a 100 (213)
T 3fan_A 29 MGSGGVFTIDGKIKCVTAAHVLTGNSA-RVSG--VGFNQM---LDFDVKGDFAIADCPNWQ--GVAPKAQFCEDGWTGRA 100 (213)
T ss_dssp EEEEEEEEETTEEEEEEEGGGSBTTEE-EEEE--TTEEEE---EECEEETTEEEEECTTCC--SCCCBCCBCCTTCCEEE
T ss_pred CCceEEEEECCcEEEEEeccEeCCCCE-EEec--CCcEEE---EEecCCCcEEEEEccCcC--CCCCcceeeeeeccCce
Confidence 3788999998 6799999999998888 6665 566664 467999999999996532 26788888753333222
Q ss_pred EEEEeeCCCCCceeEEEEEEeceeeeeccCCceeeeEEEEcccCCCCCCCCeeecCCCeEEEEEeecc
Q 009784 227 VTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSL 294 (526)
Q Consensus 227 V~~iG~p~~~~~~sv~~GiVs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VVGI~~~~~ 294 (526)
.+..-+ -+..|.|..-. .+.. .++|||||||+|.+|+||||+++..
T Consensus 101 ~~~~~~-------gv~~G~i~~~~------------al~~---T~pGdSGsPVvn~dG~VIGVHt~s~ 146 (213)
T 3fan_A 101 YWLTSS-------GVEPGVIGNGF------------AFCF---TACGDSGSPVITEAGELVGVHTGSN 146 (213)
T ss_dssp EEEETT-------EEEEEEEETTE------------EEES---SCCCSTTCEEEETTSCEEEEEEC--
T ss_pred EEEEcc-------CccccccccCC------------EEEe---cCCCCCCCccCCCCCcEEEEEeccC
Confidence 221111 12334433211 1222 2689999999999999999998864
No 37
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=99.46 E-value=6.1e-14 Score=121.13 Aligned_cols=97 Identities=24% Similarity=0.343 Sum_probs=80.3
Q ss_pred CceeeccccCceeeeccChhHHhhhcCC-----CCccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCCCCcccccc
Q 009784 322 GAYTGFPLLGVEWQKMENPDLRVAMSMK-----ADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHG 395 (526)
Q Consensus 322 g~~~~~~~LGi~~~~~~~~~~~~~lgl~-----~~~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~~~l~~~~~ 395 (526)
|++. ++|||+.+..+ +++.++.++++ ....|++|.+|.++|||++ ||++||+|++|||+++.++.++.
T Consensus 1 G~v~-r~~lGi~~~~l-~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~---- 74 (113)
T 2pzd_A 1 GSHM-RRYIGVMMLTL-SPSILAELQLREPSFPDVQHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNAEDVY---- 74 (113)
T ss_dssp -----CEECCEEEEEC-CHHHHHHHHHHCSSCCCCSSCEEEEEEBTTSHHHHHTCCTTCEEEEETTEECCSHHHHH----
T ss_pred Cccc-ccEeEEEEEeC-CHHHHHHhccccccccCCCCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCHHHHH----
Confidence 4555 89999999999 88999999873 2457999999999999999 99999999999999999877653
Q ss_pred cchhhhhhhhhcCCCCEEEEEEEECCEEEEEEEEeccc
Q 009784 396 ERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLATH 433 (526)
Q Consensus 396 ~~~~~~~~l~~~~~G~~v~l~v~R~G~~~~~~v~l~~~ 433 (526)
..+.. |+++.|+|.|+|+.+++++++...
T Consensus 75 ------~~l~~---~~~v~l~v~R~g~~~~~~v~~~~~ 103 (113)
T 2pzd_A 75 ------EAVRT---QSQLAVQIRRGRETLTLYVTPEVT 103 (113)
T ss_dssp ------HHHHH---CSSEEEEEEETTEEEEEEECCEEC
T ss_pred ------HHHhC---CCeEEEEEEECCEEEEEEEEEeec
Confidence 44443 688999999999999888887654
No 38
>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus musculus} SCOP: b.47.1.2
Probab=99.45 E-value=2e-12 Score=124.83 Aligned_cols=184 Identities=18% Similarity=0.207 Sum_probs=111.8
Q ss_pred eeCCCCCCccccCCC--cceEEEEEEEeCCEEEecccccCCCCeEEEEEcC--------CCcEEEEEEEEeccC------
Q 009784 132 HTEPNFSLPWQRKRQ--YSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRG--------SDTKYLATVLAIGTE------ 195 (526)
Q Consensus 132 ~~~~~~~~P~~~~~~--~~~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~--------~g~~~~a~vv~~d~~------ 195 (526)
......++||+.... ....|+|.+|++.+|||+|||+.. .+.|.+.. .++.+..+-+..++.
T Consensus 5 ~~a~~~~~Pw~v~l~~~~~~~CgGsLI~~~~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~ 82 (225)
T 1npm_A 5 RECIPHSQPWQAALFQGERLICGGVLVGDRWVLTAAHCKKQ--KYSVRLGDHSLQSRDQPEQEIQVAQSIQHPCYNNSNP 82 (225)
T ss_dssp EECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECGGGCCS--SCEEEESCSBTTC--CCCEEECEEEEEECTTCCSSCT
T ss_pred EECCCCCcCcEEEEeeCCceEEEEEEECCCEEEEhHHcCCC--CceEEEeeeEcCCCCCCcEEEEEEEEEECCCCCCCCc
Confidence 344556677776432 235899999999999999999963 45555531 123444444444432
Q ss_pred ----CCeEEEEecccc-cccCceeeecCCC-CcCCCcEEEEeeCCCCC------c--eeEEEEEEeceeeeeccCCceee
Q 009784 196 ----CDIAMLTVEDDE-FWEGVLPVEFGEL-PALQDAVTVVGYPIGGD------T--ISVTSGVVSRIEILSYVHGSTEL 261 (526)
Q Consensus 196 ----~DlAlLkv~~~~-~~~~~~pl~l~~~-~~~g~~V~~iG~p~~~~------~--~sv~~GiVs~~~~~~~~~~~~~~ 261 (526)
+||||||++.+. +...+.|+.|.+. ...++.+++.||..... . ..+..-+++...+.....+....
T Consensus 83 ~~~~~DIALl~L~~~~~~~~~v~pi~L~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~ 162 (225)
T 1npm_A 83 EDHSHDIMLIRLQNSANLGDKVKPVQLANLCPKVGQKCIISGWGTVTSPQENFPNTLNCAEVKIYSQNKCERAYPGKITE 162 (225)
T ss_dssp TCCTTCCEEEEESSCCCCSSSSCCCEECSSCCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEECCHHHHHHHSTTTCCT
T ss_pred cCccccEEEEeeCCcccCCCceeceECCCCCCCCCCEEEEEeCCcccCCCCCCCccceEeEEeeecHHHhhHHhCCCCCC
Confidence 599999998763 4456888888753 35689999999875311 1 12223333333332211111122
Q ss_pred eEEEEc----ccCCCCCCCCeeecCCCeEEEEEeeccccCc-cccccccccHHHHHHHHHHH
Q 009784 262 LGLQID----AAINSGNSGGPAFNDKGKCVGIAFQSLKHED-VENIGYVIPTPVIMHFIQDY 318 (526)
Q Consensus 262 ~~i~~d----a~i~~G~SGGPlvn~~G~VVGI~~~~~~~~~-~~~~~~aIP~~~i~~~l~~l 318 (526)
.++++. ...|.|+|||||+. +|.++||++.+...-+ ...-+...-+...++++++.
T Consensus 163 ~~~Ca~~~~~~~~C~GDSGgPL~~-~~~l~GI~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~ 223 (225)
T 1npm_A 163 GMVCAGSSNGADTCQGDSGGPLVC-DGMLQGITSWGSDPCGKPEKPGVYTKICRYTTWIKKT 223 (225)
T ss_dssp TEEEEECTTCCBCCTTCTTCEEEE-TTEEEEEEEECCSSSCBTTBCEEEEEHHHHHHHHHHH
T ss_pred CEEeecCCCCCeecCCCCCchheE-CCEEEEEEEeCCCCCCCCCCCeEEEEHHHHHHHHHHH
Confidence 345553 46789999999997 6899999987632111 12234445556666666553
No 39
>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage, salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar} SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A 2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A 2eek_A
Probab=99.45 E-value=1.9e-12 Score=124.81 Aligned_cols=184 Identities=15% Similarity=0.150 Sum_probs=111.7
Q ss_pred eeCCCCCCccccCCC-cceEEEEEEEeCCEEEecccccCCCCeEEEEEcC--------CCcEEEEEEEEecc-------C
Q 009784 132 HTEPNFSLPWQRKRQ-YSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRG--------SDTKYLATVLAIGT-------E 195 (526)
Q Consensus 132 ~~~~~~~~P~~~~~~-~~~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~--------~g~~~~a~vv~~d~-------~ 195 (526)
......++||+.... ....|+|.+|++.+|||+|||+.+ .+.|.+.. .++.+..+-+..++ .
T Consensus 5 ~~a~~~~~Pw~v~l~~~~~~CgGsLIs~~~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~ 82 (222)
T 1hj8_A 5 YECKAYSQPHQVSLNSGYHFCGGSLVNENWVVSAAHCYKS--RVEVRLGEHNIKVTEGSEQFISSSRVIRHPNYSSYNID 82 (222)
T ss_dssp EECCTTSCTTEEEEESSSEEEEEEEEETTEEEECGGGCCS--SCEEEESCSBTTSCCSCCEEEEEEEEEECTTCBTTTTB
T ss_pred EECCCCCCCEEEEEEcCCcEEEeEEecCCEEEECHHhcCC--CeEEEEcccccccCCCCcEEEEEEEEEECCCCCCCCCC
Confidence 344556677776432 235799999999999999999974 34555431 12344555555554 4
Q ss_pred CCeEEEEecccc-cccCceeeecCCC-CcCCCcEEEEeeCCCCCc-------eeEEEEEEeceeeeeccCCceeeeEEEE
Q 009784 196 CDIAMLTVEDDE-FWEGVLPVEFGEL-PALQDAVTVVGYPIGGDT-------ISVTSGVVSRIEILSYVHGSTELLGLQI 266 (526)
Q Consensus 196 ~DlAlLkv~~~~-~~~~~~pl~l~~~-~~~g~~V~~iG~p~~~~~-------~sv~~GiVs~~~~~~~~~~~~~~~~i~~ 266 (526)
+||||||++.+. +...+.|+.|... ...++.+++.||...... ..+..-+++...+.....+.....+++.
T Consensus 83 ~DIALl~L~~~~~~~~~v~picL~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca 162 (222)
T 1hj8_A 83 NDIMLIKLSKPATLNTYVQPVALPTSCAPAGTMCTVSGWGNTMSSTADSNKLQCLNIPILSYSDCNNSYPGMITNAMFCA 162 (222)
T ss_dssp SCCEEEEESSCCCCSSSCCCCBCCSSCCCTTCEEEEEESSCCCCSSCCTTBCEEEEEEBCCHHHHHHHSTTCCCTTEEEE
T ss_pred CcEEEEEECCcccCCCceeccCCCCCCCCCCCEEEEEECCCCCCCCCCCceeEEEEEEEcCHHHhhhhccCCCCCCeEEe
Confidence 699999999764 3446788888753 356889999998754211 1122223332222221111112234555
Q ss_pred c-----ccCCCCCCCCeeecCCCeEEEEEeeccccCccccccccccHHHHHHHHHHH
Q 009784 267 D-----AAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDY 318 (526)
Q Consensus 267 d-----a~i~~G~SGGPlvn~~G~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l 318 (526)
. ...|.|+|||||+. +|+++||++.+..-.....-+...-+...++++++.
T Consensus 163 ~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~C~~~~~p~vyt~v~~~~~WI~~~ 218 (222)
T 1hj8_A 163 GYLEGGKDSCQGDSGGPVVC-NGELQGVVSWGYGCAEPGNPGVYAKVCIFNDWLTST 218 (222)
T ss_dssp SCTTSSCBCCTTCTTCEEEE-TTEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHH
T ss_pred ccCCCCCccCCCCcccceEE-CCEEEEEEeecCCCCCCCcCcEEEEhHHhHHHHHHH
Confidence 3 35789999999997 689999998765322112233444444555555554
No 40
>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=99.44 E-value=2.6e-12 Score=124.01 Aligned_cols=183 Identities=15% Similarity=0.155 Sum_probs=110.8
Q ss_pred eCCCCCCccccCCC-cceEEEEEEEeCCEEEecccccCCCCeEEEEEcC--------CCcEEEEEEEEecc-------CC
Q 009784 133 TEPNFSLPWQRKRQ-YSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRG--------SDTKYLATVLAIGT-------EC 196 (526)
Q Consensus 133 ~~~~~~~P~~~~~~-~~~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~--------~g~~~~a~vv~~d~-------~~ 196 (526)
......+||+.... ....|+|.+|++.||||+|||+. ..+.|.+.. +++.+..+-+..++ .+
T Consensus 6 ~a~~~~~Pw~v~l~~~~~~CgGsLIs~~~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~ 83 (223)
T 3mfj_A 6 TCGANTVPYQVSLNSGYHFCGGSLINSQWVVSAAHCYK--SGIQVRLGEDNINVVEGNEQFISASKSIVHPSYNSNTLNN 83 (223)
T ss_dssp ECCTTSSTTEEEEESSSEEEEEEEEETTEEEECGGGCC--SSCEEEESCSSTTSCCSCCEEEEEEEEEECTTCCTTTCTT
T ss_pred ECCCCcCCEEEEEEcCCeEEEEEEecCCEEEEhHHhcC--CCcEEEECCceecccCCCcEEEEeeEEEECCCCCCCCCCC
Confidence 34455667766431 23579999999999999999995 445666531 12344554455554 36
Q ss_pred CeEEEEecccc-cccCceeeecCCC-CcCCCcEEEEeeCCCCC------c--eeEEEEEEeceeeeeccCCceeeeEEEE
Q 009784 197 DIAMLTVEDDE-FWEGVLPVEFGEL-PALQDAVTVVGYPIGGD------T--ISVTSGVVSRIEILSYVHGSTELLGLQI 266 (526)
Q Consensus 197 DlAlLkv~~~~-~~~~~~pl~l~~~-~~~g~~V~~iG~p~~~~------~--~sv~~GiVs~~~~~~~~~~~~~~~~i~~ 266 (526)
||||||++.+. +...+.|+.|... ...++.+++.||..... . ..+..-+++...+...........+++.
T Consensus 84 DIALl~L~~~~~~~~~v~picL~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca 163 (223)
T 3mfj_A 84 DIMLIKLKSAASLNSRVASISLPTSCASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQITSNMFCA 163 (223)
T ss_dssp CCEEEEESSCCCCBTTBCCCBCCSSCCCTTCEEEEEESSCCCSSSCCCCSSCEEEEEEBCCHHHHHHHSTTTCCTTEEEE
T ss_pred CEEEEEeCCCcccCCcEeeeECCCCCCCCCCEEEEEeeeccCCCCCcccchheEEEEEEeCHHHhhhhhcCcCCCCEEEc
Confidence 99999998763 4456888888753 35688999999875421 0 1122223333222221111112234665
Q ss_pred c-----ccCCCCCCCCeeecCCCeEEEEEeeccccCccccccccccHHHHHHHHHHH
Q 009784 267 D-----AAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDY 318 (526)
Q Consensus 267 d-----a~i~~G~SGGPlvn~~G~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l 318 (526)
. ...|.|+|||||+. +|+++||++.+..-.....-+....+...++++++.
T Consensus 164 ~~~~~~~~~C~GDSGgPL~~-~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~ 219 (223)
T 3mfj_A 164 GYLEGGKDSCQGDSGGPVVC-SGKLQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQT 219 (223)
T ss_dssp SCTTSSCBCCTTCTTCEEEE-TTEEEEEEEECSSSSBTTBCEEEEEGGGGHHHHHHH
T ss_pred cCCCCCCCcCCCCcccceEE-CCEEEEEEEECCCCCCCCCCeEEEEHHHhHHHHHHH
Confidence 3 35789999999998 689999998764221112233444444555555554
No 41
>2zch_P Prostate-specific antigen; human PSA, kallikrein related peptidases, antibodies, prostate cancer, glycoprotein, hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens} PDB: 2zck_P* 2zcl_P* 3qum_P*
Probab=99.44 E-value=2.8e-12 Score=124.69 Aligned_cols=187 Identities=18% Similarity=0.173 Sum_probs=113.1
Q ss_pred eeCCCCCCccccCCC--cceEEEEEEEeCCEEEecccccCCCCeEEEEEc------CCCcEEEEEEEEecc---------
Q 009784 132 HTEPNFSLPWQRKRQ--YSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKR------GSDTKYLATVLAIGT--------- 194 (526)
Q Consensus 132 ~~~~~~~~P~~~~~~--~~~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~------~~g~~~~a~vv~~d~--------- 194 (526)
......++||+.... ....|+|.+|++.||||+|||+.+...+.+-.. ..++.+..+-+..++
T Consensus 5 ~~a~~~~~Pw~v~l~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~ 84 (237)
T 2zch_P 5 WECEKHSQPWQVLVASRGRAVCGGVLVHPQWVLTAAHCIRNKSVILLGRHSLFHPEDTGQVFQVSHSFPHPLYDMSLLKN 84 (237)
T ss_dssp EECCTTSCTTEEEEESSSSEEEEEEEEETTEEEECGGGCCSSCEEEESCSBSSSCCTTCEEEEEEEEEECTTSCGGGGTS
T ss_pred EECCCCCCCCEEEEeeCCCeEEEEEEecCCEEEEcHHhcCCCceEEEecccccCCCCCcEEEEEEEEecCCCcchhhhcc
Confidence 344556678876432 346899999999999999999986544333211 123445555455544
Q ss_pred ---------CCCeEEEEecccc-cccCceeeecCCC-CcCCCcEEEEeeCCCCC--------ceeEEEEEEeceeeeecc
Q 009784 195 ---------ECDIAMLTVEDDE-FWEGVLPVEFGEL-PALQDAVTVVGYPIGGD--------TISVTSGVVSRIEILSYV 255 (526)
Q Consensus 195 ---------~~DlAlLkv~~~~-~~~~~~pl~l~~~-~~~g~~V~~iG~p~~~~--------~~sv~~GiVs~~~~~~~~ 255 (526)
.+||||||++.+. +...+.|+.|... ...++.+++.||..... ...+..-+++...+....
T Consensus 85 ~~~~~~~~~~~DIALl~L~~~~~~~~~v~pi~Lp~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~ 164 (237)
T 2zch_P 85 RFLRPGDDSSHDLMLLRLSEPAELTDAVKVMDLPTQEPALGTTCYASGWGSIEPEEFLTPKKLQCVDLHVISNDVCAQVH 164 (237)
T ss_dssp SSCCTTCBCTTCCEEEEESSCCCCCSSCCCCCCCSSCCCTTCEEEEEESCCSSSSSCCCCSBCEEEEEEEECHHHHHHHC
T ss_pred cccccCCCCCcceEEEEeCCCCccCCcEeeeECCCCCCCCCCEEEEEeCCccCCCCCcCCcccEEeEEEEeCHHHhcccc
Confidence 4699999998763 4456788888753 35688999999865321 112333444443332211
Q ss_pred CCceeeeEEEEc-----ccCCCCCCCCeeecCCCeEEEEEeecccc-CccccccccccHHHHHHHHHHHH
Q 009784 256 HGSTELLGLQID-----AAINSGNSGGPAFNDKGKCVGIAFQSLKH-EDVENIGYVIPTPVIMHFIQDYE 319 (526)
Q Consensus 256 ~~~~~~~~i~~d-----a~i~~G~SGGPlvn~~G~VVGI~~~~~~~-~~~~~~~~aIP~~~i~~~l~~l~ 319 (526)
.......++++. ...|.|+|||||+. ++.++||++.+... .....-+....+...++++++..
T Consensus 165 ~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i 233 (237)
T 2zch_P 165 PQKVTKFMLCAGRWTGGKSTCSGDSGGPLVC-NGVLQGITSWGSEPCALPERPSLYTKVVHYRKWIKDTI 233 (237)
T ss_dssp SSBCCTTEEEEECTTCSCBCCTTCTTCEEES-SSSEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHH
T ss_pred cCCCCceEEeecCCCCCCcccCCCccCeEEE-CCEEEEEEEeCcCCCCCCCCCcEEEEHHHHHHHHHHHH
Confidence 111112245553 36789999999997 58999999876421 11122344444555556665544
No 42
>1aut_C Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 3f6u_H*
Probab=99.44 E-value=2.2e-12 Score=126.64 Aligned_cols=188 Identities=16% Similarity=0.178 Sum_probs=116.5
Q ss_pred eeCCCCCCccccCCC---cceEEEEEEEeCCEEEecccccCCCCeEEEEEcCC--------CcEEEEEEEEecc------
Q 009784 132 HTEPNFSLPWQRKRQ---YSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGS--------DTKYLATVLAIGT------ 194 (526)
Q Consensus 132 ~~~~~~~~P~~~~~~---~~~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~~--------g~~~~a~vv~~d~------ 194 (526)
......++||+.... ....|+|.+|++.+|||+|||+.+...+.|++... +..+..+-+..++
T Consensus 5 ~~a~~~~~Pw~v~l~~~~~~~~CgGsLI~~~~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~ 84 (250)
T 1aut_C 5 KMTRRGDSPWQVVLLDSKKKLACGAVLIHPSWVLTAAHCMDESKKLLVRLGEYDLRRWEKWELDLDIKEVFVHPNYSKST 84 (250)
T ss_dssp EECCTTSCTTEEEEECTTSCEEEEEEEEETTEEEECGGGSSSCSCCEEEESCCBTTCCCTTCEEEEEEEEEECTTCBTTT
T ss_pred EECCCCCCCCEEEEecCCCceEEEEEEeeCCEEEEChHHcCCCCceEEEEcccccCCCCCccEEEEEEEEEECCCCCCCC
Confidence 344556678866432 23589999999999999999998877777877421 2344555455554
Q ss_pred -CCCeEEEEecccc-cccCceeeecCCC-------CcCCCcEEEEeeCCCCC------------ceeEEEEEEeceeeee
Q 009784 195 -ECDIAMLTVEDDE-FWEGVLPVEFGEL-------PALQDAVTVVGYPIGGD------------TISVTSGVVSRIEILS 253 (526)
Q Consensus 195 -~~DlAlLkv~~~~-~~~~~~pl~l~~~-------~~~g~~V~~iG~p~~~~------------~~sv~~GiVs~~~~~~ 253 (526)
.+||||||++.+. +...+.|+.|... ...|+.+++.||..... ...+..-+++...+..
T Consensus 85 ~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~~~~~L~~~~~~i~~~~~C~~ 164 (250)
T 1aut_C 85 TDNDIALLHLAQPATLSQTIVPICLPDSGLAERELNQAGQETLVTGWGYHSSREKEAKRNRTFVLNFIKIPVVPHNECSE 164 (250)
T ss_dssp TBTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHTTTSTTCEEEEEECCCCCSCCSCCCSSCSSBCEEEEEEEECHHHHHH
T ss_pred CCCcEEEEEECCcccCCCceeeeEcCCCccccccccCCCCEEEEEEeCCCCCCCccccccccceeeEEEEEEecHHHhhH
Confidence 3699999999763 3446788888653 24578999999874321 1123334444443322
Q ss_pred ccCCceeeeEEEEc-----ccCCCCCCCCeeecC-CCe--EEEEEeeccccCccccccccccHHHHHHHHHHHH
Q 009784 254 YVHGSTELLGLQID-----AAINSGNSGGPAFND-KGK--CVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYE 319 (526)
Q Consensus 254 ~~~~~~~~~~i~~d-----a~i~~G~SGGPlvn~-~G~--VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l~ 319 (526)
.........+++.. ...|.|+|||||+.. +|+ ++||++.+..-......+...-+....+++++..
T Consensus 165 ~~~~~~~~~~~Cag~~~~~~~~C~GDSGGPL~~~~~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI~~~~ 238 (250)
T 1aut_C 165 VMSNMVSENMLCAGILGDRQDACEGDSGGPMVASFHGTWFLVGLVSWGEGCGLLHNYGVYTKVSRYLDWIHGHI 238 (250)
T ss_dssp HCSSCCCTTEEEECCTTCCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEECGGGTHHHHHHHH
T ss_pred HhccCCCCCEEEeCCCCCCCCCCCCCCchheEEEECCeEEEEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHh
Confidence 21111122356653 357899999999864 564 9999987653221122344445555556665544
No 43
>4i8h_A Cationic trypsin, beta-trypsin; serine protease, hydrolase; HET: BEN; 0.75A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=99.44 E-value=2.4e-12 Score=123.78 Aligned_cols=185 Identities=15% Similarity=0.144 Sum_probs=113.3
Q ss_pred eeCCCCCCccccCCC-cceEEEEEEEeCCEEEecccccCCCCeEEEEEcC--------CCcEEEEEEEEecc-------C
Q 009784 132 HTEPNFSLPWQRKRQ-YSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRG--------SDTKYLATVLAIGT-------E 195 (526)
Q Consensus 132 ~~~~~~~~P~~~~~~-~~~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~--------~g~~~~a~vv~~d~-------~ 195 (526)
......++||..... ....|+|.+|++.+|||+|||+.+ .+.|.+.. +.+.+..+-+..++ .
T Consensus 5 ~~a~~~~~Pw~v~l~~~~~~C~GtLI~~~~VLTAAhC~~~--~~~v~~g~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~ 82 (223)
T 4i8h_A 5 YTCGANTVPYQVSLNSGYHFCGGSLINSQWVVSAAHCYKS--GIQVRLGEDNINVVEGNEQFISASKSIVHPSYNSNTLN 82 (223)
T ss_dssp EECCTTSSTTEEEEESSSEEEEEEECSSSEEEECGGGCCS--SCEEEESCSSTTSCCSCCEEEEEEEEEECTTCCTTTCT
T ss_pred EECCCCCCCeEEEecCCCcEEEEEEEcCCEEEecHHhCCC--CcEEEEccccccccCCCcEEEEEeEEEECcCCCCCCCc
Confidence 344556677766432 335799999999999999999985 34444421 22344555555665 3
Q ss_pred CCeEEEEecccc-cccCceeeecCCC-CcCCCcEEEEeeCCCCCc--------eeEEEEEEeceeeeeccCCceeeeEEE
Q 009784 196 CDIAMLTVEDDE-FWEGVLPVEFGEL-PALQDAVTVVGYPIGGDT--------ISVTSGVVSRIEILSYVHGSTELLGLQ 265 (526)
Q Consensus 196 ~DlAlLkv~~~~-~~~~~~pl~l~~~-~~~g~~V~~iG~p~~~~~--------~sv~~GiVs~~~~~~~~~~~~~~~~i~ 265 (526)
+||||||++.+. +...+.|+.|... ...++.+++.||...... ..+...+++...+...........+++
T Consensus 83 ~DIAll~L~~~~~~~~~v~pi~l~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~C 162 (223)
T 4i8h_A 83 NDIMLIKLKSAASLNSRVASISLPTSCASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQITSNMFC 162 (223)
T ss_dssp TCCEEEEESSCCCCBTTBCCCBCCSSCCCTTCEEEEEESSCCCSSSCCCCSSCEEEEEEBCCHHHHHHHSTTTCCTTEEE
T ss_pred CCEEEEEECCcCcCCCceeceECCCCCCCCCCEEEEEecccccCCCCCccccceEEEeeecCHHHHHHhhCCCCCCCeEe
Confidence 699999998763 4456888888753 456899999998653221 122233333322222111112223455
Q ss_pred Ec-----ccCCCCCCCCeeecCCCeEEEEEeeccccCccccccccccHHHHHHHHHHHH
Q 009784 266 ID-----AAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYE 319 (526)
Q Consensus 266 ~d-----a~i~~G~SGGPlvn~~G~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l~ 319 (526)
.. ...|.|+|||||+. +++++||++.+..-......+....+...++++++..
T Consensus 163 a~~~~~~~~~C~GDsGgPl~~-~~~l~Gi~S~g~~c~~~~~p~vyt~v~~~~~WI~~~i 220 (223)
T 4i8h_A 163 AGYLEGGKDSCQGDSGGPVVC-SGKLQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTI 220 (223)
T ss_dssp ESCTTSSCBCCTTCTTCEEEE-TTEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHH
T ss_pred ccCCCCCCccCCCCCCCcEEE-CCEEEEEEEcCCCCCCCCCCeEEEEHHHHHHHHHHHH
Confidence 53 36789999999997 5799999987653222222344455555566665544
No 44
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=99.42 E-value=8.3e-14 Score=120.17 Aligned_cols=97 Identities=20% Similarity=0.357 Sum_probs=82.4
Q ss_pred CceeeccccCceeeeccChhHHhhhcCCC-----CccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCCCCcccccc
Q 009784 322 GAYTGFPLLGVEWQKMENPDLRVAMSMKA-----DQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHG 395 (526)
Q Consensus 322 g~~~~~~~LGi~~~~~~~~~~~~~lgl~~-----~~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~~~l~~~~~ 395 (526)
|++. ++|||+.+..+ +++.++.++++. ...|++|.+|.++|||++ ||++||+|++|||+++.++.++.
T Consensus 1 G~v~-~~~lGi~~~~l-~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~---- 74 (112)
T 2p3w_A 1 GSHM-KRFIGIRMRTI-TPSLVDELKASNPDFPEVSSGIYVQEVAPNSPSQRGGIQDGDIIVKVNGRPLVDSSELQ---- 74 (112)
T ss_dssp CCCC-EEECCEEEEEC-CHHHHHHHHHHCTTC--CCSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHHH----
T ss_pred CCcc-cceeeEEEecC-CHHHHHHhcccCcCcccCCCCeEEEEECCCChHHHCCCCCCCEEEEECCEECCCHHHHH----
Confidence 4556 89999999999 888999988742 357999999999999999 99999999999999999887753
Q ss_pred cchhhhhhhhhcCCCCEEEEEEEECCEEEEEEEEeccc
Q 009784 396 ERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLATH 433 (526)
Q Consensus 396 ~~~~~~~~l~~~~~G~~v~l~v~R~G~~~~~~v~l~~~ 433 (526)
..+ ..|+++.|+|.|+|+.+++++++...
T Consensus 75 ------~~l---~~g~~v~l~v~R~g~~~~~~v~~~~~ 103 (112)
T 2p3w_A 75 ------EAV---LTESPLLLEVRRGNDDLLFSIAPEVV 103 (112)
T ss_dssp ------HHH---HHCSSEEEEEEETTEEEEEEECCEEE
T ss_pred ------HHH---hCCCeEEEEEEECCEEEEEEEEEeee
Confidence 444 24889999999999998888877654
No 45
>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET: NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G*
Probab=99.42 E-value=3.9e-12 Score=123.63 Aligned_cols=185 Identities=15% Similarity=0.081 Sum_probs=111.3
Q ss_pred eeCCCCCCccccCCC--cceEEEEEEEeCCEEEecccccCCCCeEEEEEcCC--------CcEEEEEEEEecc-------
Q 009784 132 HTEPNFSLPWQRKRQ--YSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGS--------DTKYLATVLAIGT------- 194 (526)
Q Consensus 132 ~~~~~~~~P~~~~~~--~~~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~~--------g~~~~a~vv~~d~------- 194 (526)
......++||+.... ....|+|.+|++.||||+|||+. ..+.|.+... ++.+..+-+..++
T Consensus 5 ~~a~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~ 82 (237)
T 1ao5_A 5 FNCEKNSQPWQVAVYYQKEHICGGVLLDRNWVLTAAHCYV--DQYEVWLGKNKLFQEEPSAQHRLVSKSFPHPGFNMSLL 82 (237)
T ss_dssp EECCTTSCTTEEEEEETTEEEEEEEEEETTEEEECTTCCC--SSCEEEESCCBSSSCCSSCEECCEEEEEECTTSCGGGG
T ss_pred eECCCCCcCCEEEEeeCCCeEEEEEEeeCCEEEECHHHCC--CCCEEEecccccccCCCCcEEEEEEEEEcCCCcCcccc
Confidence 344556778876432 34689999999999999999996 3455655311 2233343344443
Q ss_pred -----------CCCeEEEEecccc-cccCceeeecCCC-CcCCCcEEEEeeCCCCC--------ceeEEEEEEeceeeee
Q 009784 195 -----------ECDIAMLTVEDDE-FWEGVLPVEFGEL-PALQDAVTVVGYPIGGD--------TISVTSGVVSRIEILS 253 (526)
Q Consensus 195 -----------~~DlAlLkv~~~~-~~~~~~pl~l~~~-~~~g~~V~~iG~p~~~~--------~~sv~~GiVs~~~~~~ 253 (526)
.+||||||++.+. +.+.+.|+.|... ...++.+++.||..... ...+..-+++...+..
T Consensus 83 ~~~~~~~~~~~~~DIALl~L~~~~~~~~~v~picL~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~ 162 (237)
T 1ao5_A 83 MLQTIPPGADFSDDLMLLRLSKPADITDVVKPIALPTKEPKPGSKCLASGWGSITPTRWQKPDDLQCVFITLLPNENCAK 162 (237)
T ss_dssp GCSSCCTTCCCTTCCEEEEESSCCCCCSSSCCCCCCCSCCCTTCEEEEEESCCSSCC-CCCCSBCEEEEEEEECHHHHHH
T ss_pred cccccccccCCCCCEEEEEeCCccccCCceeCCCcCCCCCCCCCEEEEEECCccCCCCCCCCCcccEEEEEecChhHhhh
Confidence 5799999998763 3446788888754 35688999999864321 1123334444333322
Q ss_pred ccCCceeeeEEEEc-----ccCCCCCCCCeeecCCCeEEEEEeecc-ccCccccccccccHHHHHHHHHHHH
Q 009784 254 YVHGSTELLGLQID-----AAINSGNSGGPAFNDKGKCVGIAFQSL-KHEDVENIGYVIPTPVIMHFIQDYE 319 (526)
Q Consensus 254 ~~~~~~~~~~i~~d-----a~i~~G~SGGPlvn~~G~VVGI~~~~~-~~~~~~~~~~aIP~~~i~~~l~~l~ 319 (526)
.........+++.. ...|.|+|||||+. +|.++||++.+. .-.....-+....+....+++++..
T Consensus 163 ~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~ 233 (237)
T 1ao5_A 163 VYLQKVTDVMLCAGEMGGGKDTCRDDSGGPLIC-DGILQGTTSYGPVPCGKPGVPAIYTNLIKFNSWIKDTM 233 (237)
T ss_dssp HCSSCCCTTEEEEECTTCSCBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEECGGGGHHHHHHHH
T ss_pred hhcccCCCCEEEEccCCCCCCCCCCCCcceEEE-CCEEeEEEeEcCCCCCCCCCCcEEEEHHHHHHHHHHHH
Confidence 11111112345553 36789999999998 689999998762 1111122233444445555555543
No 46
>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase; 1.42A {Equus caballus} SCOP: b.47.1.2
Probab=99.42 E-value=2.6e-12 Score=124.87 Aligned_cols=159 Identities=17% Similarity=0.168 Sum_probs=99.8
Q ss_pred eCCCCCCccccCCC--cceEEEEEEEeCCEEEecccccCCCCeEEEEEcC--------CCcEEEEEEEEecc--------
Q 009784 133 TEPNFSLPWQRKRQ--YSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRG--------SDTKYLATVLAIGT-------- 194 (526)
Q Consensus 133 ~~~~~~~P~~~~~~--~~~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~--------~g~~~~a~vv~~d~-------- 194 (526)
.....++||+.... ....|+|.+|++.||||+|||+. ..+.|.+.. .+..+..+-+..++
T Consensus 6 ~a~~~~~Pw~v~l~~~~~~~CgGsLIs~~~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~ 83 (237)
T 1gvz_A 6 ECEKHSKPWQVAVYHQGHFQCGGVLVHPQWVLTAAHCMS--DDYQIWLGRHNLSKDEDTAQFHQVSDSFLDPQFDLSLLK 83 (237)
T ss_dssp ECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECGGGCC--SSCEEEESCSBTTSCCTTCEEECEEEEEECTTSCGGGGG
T ss_pred ECCCCCCCeEEEEeeCCceEEEeEEeeCCEEEEcHHhCC--CCCeEEEeecccccCCCCceEEEeeeEecCCccCccccc
Confidence 34455677766432 23579999999999999999997 445555531 12344455455554
Q ss_pred ----------CCCeEEEEecccc-cccCceeeecCCC-CcCCCcEEEEeeCCCC---Cc-----eeEEEEEEeceeeeec
Q 009784 195 ----------ECDIAMLTVEDDE-FWEGVLPVEFGEL-PALQDAVTVVGYPIGG---DT-----ISVTSGVVSRIEILSY 254 (526)
Q Consensus 195 ----------~~DlAlLkv~~~~-~~~~~~pl~l~~~-~~~g~~V~~iG~p~~~---~~-----~sv~~GiVs~~~~~~~ 254 (526)
.+||||||++.+. +.+.+.|+.|... ...++.+++.||.... .. ..+..-+++...+...
T Consensus 84 ~~~~~~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~ 163 (237)
T 1gvz_A 84 KKYLRPYDDISHDLMLLRLAQPARITDAVKILDLPTQEPKLGSTCYTSGWGLISTFTNRGSGTLQCVELRLQSNEKCARA 163 (237)
T ss_dssp CSSCCTTSCCTTCCEEEEESSCCCCBTTBCCCCCCSSCCCTTCEEEEEEEECSCTTTCSEEEEEEEEEEEEECGGGGCSS
T ss_pred ccccccccccCCceEEEEeCCCcccCCcEeeeECCCCCCCCCCEEEEECCCcccCCCCCCCCccEEEEEeEeChhHhhhh
Confidence 6799999999763 4456788888753 3567889999987541 11 1122223333333221
Q ss_pred cCCceeeeEEEEc-----ccCCCCCCCCeeecCCCeEEEEEeecc
Q 009784 255 VHGSTELLGLQID-----AAINSGNSGGPAFNDKGKCVGIAFQSL 294 (526)
Q Consensus 255 ~~~~~~~~~i~~d-----a~i~~G~SGGPlvn~~G~VVGI~~~~~ 294 (526)
........+++.. ...|.|+|||||+. +|.++||++.+.
T Consensus 164 ~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~GI~S~g~ 207 (237)
T 1gvz_A 164 YPEKMTEFVLCATHRDDSGSICLGDSGGALIC-DGVFQGITSWGY 207 (237)
T ss_dssp CGGGCCTTEEEEECSSTTCEECGGGTTCEEEE-TTEEEEEECCCS
T ss_pred hhhcCCCceEEEeeCCCCCccCCCCccCcEee-CCEEEEEEEeCC
Confidence 1111111245543 25689999999997 689999998764
No 47
>1cgh_A Cathepsin G; inflammation, specificity, serine protease, hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A* 1kyn_A*
Probab=99.42 E-value=4.1e-12 Score=122.57 Aligned_cols=181 Identities=18% Similarity=0.138 Sum_probs=108.6
Q ss_pred eCCCCCCccccCCC-----cceEEEEEEEeCCEEEecccccCCCCeEEEEEcC--------CCcEEEEEEEEeccC----
Q 009784 133 TEPNFSLPWQRKRQ-----YSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRG--------SDTKYLATVLAIGTE---- 195 (526)
Q Consensus 133 ~~~~~~~P~~~~~~-----~~~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~--------~g~~~~a~vv~~d~~---- 195 (526)
......+||+.... ....|+|.+|++.||||+|||+.+ .+.|++.. ..+.+..+-+..++.
T Consensus 6 ~a~~~~~Pw~v~l~~~~~~~~~~CgGsLI~~~~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~ 83 (224)
T 1cgh_A 6 ESRPHSRPYMAYLQIQSPAGQSRCGGFLVREDFVLTAAHCWGS--NINVTLGAHNIQRRENTQQHITARRAIRHPQYNQR 83 (224)
T ss_dssp ECCTTSSTTEEEEEESTTTTSCEEEEEEEETTEEEECGGGCCS--SEEEEESCSBTTSCCTTCEEEEEEEEEECTTCBTT
T ss_pred ECCCCCCCcEEEEEEECCCCCeEEEEEEeeCCEEEEhHHhCCC--CCEEEEeecccCCCCCccEEEEEEEEEcCCCCCCC
Confidence 34445667765321 136899999999999999999976 45666531 123455555555553
Q ss_pred ---CCeEEEEecccc-cccCceeeecCCCC---cCCCcEEEEeeCCCCC------ceeEEEEEEeceeeeeccCCceeee
Q 009784 196 ---CDIAMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGD------TISVTSGVVSRIEILSYVHGSTELL 262 (526)
Q Consensus 196 ---~DlAlLkv~~~~-~~~~~~pl~l~~~~---~~g~~V~~iG~p~~~~------~~sv~~GiVs~~~~~~~~~~~~~~~ 262 (526)
+||||||++.+. +...+.|+.|.... ..++.+++.||..... ...+..-+++...+...........
T Consensus 84 ~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~ 163 (224)
T 1cgh_A 84 TIQNDIMLLQLSRRVRRNRNVNPVALPRAQEGLRPGTLCTVAGWGRVSMRRGTDTLREVQLRVQRDRQCLRIFGSYDPRR 163 (224)
T ss_dssp TTBSCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSSSCCCSBCEEEEEEBCCHHHHHHHCTTCCTTT
T ss_pred CCcCCEEEEEECCCCcCCCceEeeECCCCCCCCCCCCEEEEEECCcCCCCCCCCcceEEEEEeeCHHHHHHHhCcCCCcc
Confidence 599999998763 34468888887532 4578899999865321 1122223333322221111111111
Q ss_pred EEEEc-----ccCCCCCCCCeeecCCCeEEEEEeeccccCccccccccccHHHHHHHHHHH
Q 009784 263 GLQID-----AAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDY 318 (526)
Q Consensus 263 ~i~~d-----a~i~~G~SGGPlvn~~G~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l 318 (526)
.++.. ...|.|+|||||+. +|.++||++.+.. ....-+....+....+++++.
T Consensus 164 ~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~--~~~~p~vyt~V~~~~~WI~~~ 221 (224)
T 1cgh_A 164 QICVGDRRERKAAFKGDSGGPLLC-NNVAHGIVSYGKS--SGVPPEVFTRVSSFLPWIRTT 221 (224)
T ss_dssp EEEECCTTSCCBCCTTCTTCEEEE-TTEEEEEEEECCT--TCCSCEEEEEGGGGHHHHHHH
T ss_pred eEeeccCCCCCeEeeCCCccceEE-ccEEEEEEEEECC--CCCCCeEEEEHHHhHHHHHHH
Confidence 45553 35789999999998 5799999987651 112223334444455555543
No 48
>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase; 2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A
Probab=99.42 E-value=4.5e-12 Score=123.47 Aligned_cols=190 Identities=17% Similarity=0.101 Sum_probs=114.9
Q ss_pred EEeeeeCCCCCCccccCCC--cceEEEEEEEeCCEEEecccccCC---CCeEEEEEcCC--------CcEEEEEEEEecc
Q 009784 128 VFCVHTEPNFSLPWQRKRQ--YSSSSSGFAIGGRRVLTNAHSVEH---YTQVKLKKRGS--------DTKYLATVLAIGT 194 (526)
Q Consensus 128 I~~~~~~~~~~~P~~~~~~--~~~~GSGfvI~~g~ILT~aHvV~~---~~~i~V~~~~~--------g~~~~a~vv~~d~ 194 (526)
|.........++||+.... ....|+|.+|++.||||+|||+.+ ...+.|.+... .+.+..+-+..++
T Consensus 3 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp 82 (240)
T 1mza_A 3 IIGGKEVSPHSRPFMASIQYGGHHVCGGVLIDPQWVLTAAHCQYRFTKGQSPTVVLGAHSLSKNEASKQTLEIKKFIPFS 82 (240)
T ss_dssp CCCCEECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECGGGSCTTCSCSCEEEEESCSBSSSCCTTCEEEEEEEEEECC
T ss_pred eECCEECCCCCCCeEEEEeeCCceEEEEEEecCCEEEECHHhCCCCCCCCCeEEEeCceecCCCCCceEEEEEEEEEeCC
Confidence 4444555666778876443 346899999999999999999864 45677776421 2344444444444
Q ss_pred -------CCCeEEEEecccc-cccCceeeecCC--CCcCCCcEEEEeeCCCCC--------ceeEEEEEEeceeee--ec
Q 009784 195 -------ECDIAMLTVEDDE-FWEGVLPVEFGE--LPALQDAVTVVGYPIGGD--------TISVTSGVVSRIEIL--SY 254 (526)
Q Consensus 195 -------~~DlAlLkv~~~~-~~~~~~pl~l~~--~~~~g~~V~~iG~p~~~~--------~~sv~~GiVs~~~~~--~~ 254 (526)
.+||||||++.+. +...+.|+.|.. ....++.+++.||..... ...+..-+++...+. ..
T Consensus 83 ~y~~~~~~~DIALl~L~~~~~~~~~v~pi~l~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~ 162 (240)
T 1mza_A 83 RVTSDPQSNDIMLVKLQTAAKLNKHVKMLHIRSKTSLRSGTKCKVTGWGATDPDSLRPSDTLREVTVTVLSRKLCNSQSY 162 (240)
T ss_dssp CSSCSSSSSCCEEEEESSCCCCBTTBCCCCBCSSCCCCTTCEEEEEECCCSSTTCSSCCSBCEEEEEEECCHHHHTSTTT
T ss_pred CccCCCCCceEEEEEeCCCcccCCceeeeecCCcccCCCCCEEEEEeCCcCCCCCCCccccceEeEEEEeCHHHcCCcce
Confidence 3799999999763 345678888865 234678899999864321 112333344433332 11
Q ss_pred cCC--ceeeeEEEEc-----ccCCCCCCCCeeecCCCeEEEEEeeccccCccccccccccHHH-HHHHHHHH
Q 009784 255 VHG--STELLGLQID-----AAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPV-IMHFIQDY 318 (526)
Q Consensus 255 ~~~--~~~~~~i~~d-----a~i~~G~SGGPlvn~~G~VVGI~~~~~~~~~~~~~~~aIP~~~-i~~~l~~l 318 (526)
..+ .....+++.. ...|.|+|||||+. +|.++||++.+..-.....-+...-+.. ..+++++.
T Consensus 163 ~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGGPL~~-~~~l~Gi~S~g~~C~~~~~p~vyt~v~~~y~~WI~~~ 233 (240)
T 1mza_A 163 YNGDPFITKDMVCAGDAKGQKDSCKGDAGGPLIC-KGVFHAIVSGGHECGVATKPGIYTLLTKKYQTWIKSN 233 (240)
T ss_dssp TTTTTCCCTTEEEEECTTSCCCCCTTCTTCEEEE-TTEEEEEECSSCCSSCTTCCEEEEECCHHHHHHHHHH
T ss_pred eCCCCcCCCCeEeecCCCCCCccCCCCCCCeeEE-CCEEEEEEEECCCCCCCCCCcEEEeChHHHHHHHHHh
Confidence 111 1112345553 36789999999997 6899999987642211112233333333 55566554
No 49
>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6, benzamidine, protease, brain serine protease, myelencephalon specific protease, MSP, ZYME; 1.56A {Homo sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A*
Probab=99.41 E-value=4.8e-12 Score=122.08 Aligned_cols=185 Identities=19% Similarity=0.131 Sum_probs=112.3
Q ss_pred eeCCCCCCccccCCC--cceEEEEEEEeCCEEEecccccCCCCeEEEEEcC--------CCcEEEEEEEEecc-------
Q 009784 132 HTEPNFSLPWQRKRQ--YSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRG--------SDTKYLATVLAIGT------- 194 (526)
Q Consensus 132 ~~~~~~~~P~~~~~~--~~~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~--------~g~~~~a~vv~~d~------- 194 (526)
......++||+.... ....|+|.+|++.+|||+|||+.. .+.|.+.. .++.+..+-+..++
T Consensus 5 ~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~ 82 (223)
T 1lo6_A 5 GPCDKTSHPYQAALYTSGHLLCGGVLIHPLWVLTAAHCKKP--NLQVFLGKHNLRQRESSQEQSSVVRAVIHPDYDAASH 82 (223)
T ss_dssp EECCTTSCTTEEEEEETTEEEEEEEEEETTEEEECGGGCCT--TCEEEESCSBTTSCCTTCEEEEEEEEEECTTCCTTTC
T ss_pred EECCCCCCCCEEEEecCCCEEEEeEEecCCEEEECccCCCC--CeEEEEcceecCCCCCCcEEEEEEEEEECCCCCCCCC
Confidence 344455677766432 236899999999999999999974 34555421 12344444444554
Q ss_pred CCCeEEEEecccc-cccCceeeecCCC-CcCCCcEEEEeeCCCCC------ceeEEEEEEeceeeeeccCCceeeeEEEE
Q 009784 195 ECDIAMLTVEDDE-FWEGVLPVEFGEL-PALQDAVTVVGYPIGGD------TISVTSGVVSRIEILSYVHGSTELLGLQI 266 (526)
Q Consensus 195 ~~DlAlLkv~~~~-~~~~~~pl~l~~~-~~~g~~V~~iG~p~~~~------~~sv~~GiVs~~~~~~~~~~~~~~~~i~~ 266 (526)
.+||||||++.+. +.+.+.|+.|... ...++.+++.||..... ...+..-+++...+.....+.....+++.
T Consensus 83 ~~DIAll~L~~~~~~~~~v~pi~l~~~~~~~~~~~~v~GwG~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~Ca 162 (223)
T 1lo6_A 83 DQDIMLLRLARPAKLSELIQPLPLERDCSANTTSCHILGWGKTADGDFPDTIQCAYIHLVSREECEHAYPGQITQNMLCA 162 (223)
T ss_dssp TTCCEEEEESSCCCCBTTBCCCCBCCCTTCCCCEEEEEESSCCTTSSCCSBCEEEEEEEECHHHHHHHSTTTCCTTEEEE
T ss_pred cCeEEEEEECCcccCCCceeecccCCCCCCCCCEEEEEEECCCCCCCcCceeeEEEEEEeCHHHhhhhhCCCCCCCeEEe
Confidence 4699999998763 3456788888754 35688999999865421 11233344444333222111112234655
Q ss_pred c-----ccCCCCCCCCeeecCCCeEEEEEeecc-ccCccccccccccHHHHHHHHHHHH
Q 009784 267 D-----AAINSGNSGGPAFNDKGKCVGIAFQSL-KHEDVENIGYVIPTPVIMHFIQDYE 319 (526)
Q Consensus 267 d-----a~i~~G~SGGPlvn~~G~VVGI~~~~~-~~~~~~~~~~aIP~~~i~~~l~~l~ 319 (526)
. ...|.|+|||||+. +|.++||++.+. .-.....-+...-+...++++++..
T Consensus 163 ~~~~~~~~~C~GDsGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i 220 (223)
T 1lo6_A 163 GDEKYGKDSCQGDSGGPLVC-GDHLRGLVSWGNIPCGSKEKPGVYTNVCRYTNWIQKTI 220 (223)
T ss_dssp ECTTTCCBCCTTTTTCEEEE-TTEEEEEEEECCSSCCCSSSCEEEEEGGGGHHHHHHHH
T ss_pred ecCCCCCeeccccCCCcEEe-CCEEEEEEeeCCCCCCCCCCCcEEEEHHHHHHHHHHHh
Confidence 3 36789999999997 589999998762 1111122333444455556665543
No 50
>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate conformations, alternative splicing, glycoprotein, hydrolase, protease, secreted; HET: K7J; 1.00A {Homo sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A
Probab=99.41 E-value=3.8e-12 Score=122.86 Aligned_cols=183 Identities=17% Similarity=0.165 Sum_probs=110.5
Q ss_pred eCCCCCCccccCCC--cceEEEEEEEeCCEEEecccccCCCCeEEEEEcC------CCcEEEEEEEEecc-------CCC
Q 009784 133 TEPNFSLPWQRKRQ--YSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRG------SDTKYLATVLAIGT-------ECD 197 (526)
Q Consensus 133 ~~~~~~~P~~~~~~--~~~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~------~g~~~~a~vv~~d~-------~~D 197 (526)
.....++||+.... ....|+|.+|++.+|||+|||+. ..+.|.+.. .++.+..+-+..++ .+|
T Consensus 6 ~a~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~D 83 (224)
T 2qxi_A 6 PCARGSHPWQVALLSGNQLHCGGVLVNERWVLTAAHCKM--NEYTVHLGSDTLGDRRAQRIKASKSFRHPGYSTQTHVND 83 (224)
T ss_dssp ECCTTSCTTEEEEEETTEEEEEEEEEETTEEEECGGGCC--SCEEEEESCSBTTCTTSEEEEECEEEECTTCCTTTCTTC
T ss_pred ECCCCCCCCEEEEeeCCCeEEEEEEecCCEEEEhHHcCC--CCcEEEEeeeecCCCccEEEEEEEEEECCCCCCCCCcCc
Confidence 34455667766432 12279999999999999999995 567777642 12344544455554 369
Q ss_pred eEEEEecccc-cccCceeeecCCC-CcCCCcEEEEeeCCCCC--------ceeEEEEEEeceeeeeccCCceeeeEEEEc
Q 009784 198 IAMLTVEDDE-FWEGVLPVEFGEL-PALQDAVTVVGYPIGGD--------TISVTSGVVSRIEILSYVHGSTELLGLQID 267 (526)
Q Consensus 198 lAlLkv~~~~-~~~~~~pl~l~~~-~~~g~~V~~iG~p~~~~--------~~sv~~GiVs~~~~~~~~~~~~~~~~i~~d 267 (526)
|||||++.+. +...+.|+.|... ...++.+++.||..... ...+..-+++...+...........+++..
T Consensus 84 IALl~L~~~~~~~~~v~picL~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~ 163 (224)
T 2qxi_A 84 LMLVKLNSQARLSSMVKKVRLPSRCEPPGTTCTVSGWGTTTSPDVTFPSDLMCVDVKLISPQDCTKVYKDLLENSMLCAG 163 (224)
T ss_dssp CEEEECSSCCCCBTTBCCCCCCSSCCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEEECHHHHHHHHGGGCCTTEEEEE
T ss_pred EEEEEeCCCCcCCCceeeEECCCCCCCCCCEEEEEeCCccCCCCCCCChhheEEEeeecCHHHhhHHhcCcCCCCeEEec
Confidence 9999998763 4456888888753 35688999999875421 112334444443332211111111245553
Q ss_pred -----ccCCCCCCCCeeecCCCeEEEEEeecc-ccCccccccccccHHHHHHHHHHH
Q 009784 268 -----AAINSGNSGGPAFNDKGKCVGIAFQSL-KHEDVENIGYVIPTPVIMHFIQDY 318 (526)
Q Consensus 268 -----a~i~~G~SGGPlvn~~G~VVGI~~~~~-~~~~~~~~~~aIP~~~i~~~l~~l 318 (526)
...|.|+|||||+. +|+++||++.+. .-.....-+...-+...++++++.
T Consensus 164 ~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~ 219 (224)
T 2qxi_A 164 IPDSKKNACNGDSGGPLVC-RGTLQGLVSWGTFPCGQPNDPGVYTQVCKFTKWINDT 219 (224)
T ss_dssp CTTCCCBCCTTCTTCEEEE-TTEEEEEEEECCSSSCCTTCCEEEEEGGGSHHHHHHH
T ss_pred CCCCCCccCCCCccccEEE-CCEEEEEEEeCCCCCCCCCCCeEEEEHHHHHHHHHHH
Confidence 35789999999997 689999998762 111111223334444455555544
No 51
>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural proteo europe, spine, structural genomics, hydrolase; HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A*
Probab=99.41 E-value=4.6e-12 Score=122.23 Aligned_cols=184 Identities=16% Similarity=0.155 Sum_probs=110.5
Q ss_pred eeCCCCCCccccCCC--cceEEEEEEEeCCEEEecccccCCCCeEEEEEcC---------CCcEEEEEEEEecc------
Q 009784 132 HTEPNFSLPWQRKRQ--YSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRG---------SDTKYLATVLAIGT------ 194 (526)
Q Consensus 132 ~~~~~~~~P~~~~~~--~~~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~---------~g~~~~a~vv~~d~------ 194 (526)
......++||+.... ....|+|.+|++.+|||+|||+.+ .+.|.+.. +.+.+..+-+..++
T Consensus 5 ~~a~~~~~Pw~v~l~~~~~~~CgGsLIs~~~VLTAAHC~~~--~~~v~~g~~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~ 82 (223)
T 2bdg_A 5 EDCSPHSQPWQAALVMENELFCSGVLVHPQWVLSAAHCFQN--SYTIGLGLHSLEADQEPGSQMVEASLSVRHPEYNRPL 82 (223)
T ss_dssp EECCTTSSTTEEEEECSSCEEEEEEEEETTEEEECGGGCCS--SEEEEESCSBSCGGGCTTCEEEEEEEEEECTTTTSST
T ss_pred EECCCCCCCcEEEEeeCCCEEEEEEEecCCEEEEhHHhCCC--CeEEEEeeeecCCCCCCCcEEEEEEEEEeCCCCCCCC
Confidence 344556678876432 346899999999999999999975 34455421 12344555455554
Q ss_pred -CCCeEEEEecccc-cccCceeeecCCC-CcCCCcEEEEeeCCCCCc------eeEEEEEEeceeeeeccCCceeeeEEE
Q 009784 195 -ECDIAMLTVEDDE-FWEGVLPVEFGEL-PALQDAVTVVGYPIGGDT------ISVTSGVVSRIEILSYVHGSTELLGLQ 265 (526)
Q Consensus 195 -~~DlAlLkv~~~~-~~~~~~pl~l~~~-~~~g~~V~~iG~p~~~~~------~sv~~GiVs~~~~~~~~~~~~~~~~i~ 265 (526)
.+||||||++.+. +...+.|+.|.+. ...++.+++.||...... ..+..-+++...+...........+++
T Consensus 83 ~~~DIALl~L~~~v~~~~~v~pi~l~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~C 162 (223)
T 2bdg_A 83 LANDLMLIKLDESVSESDTIRSISIASQCPTAGNSCLVSGWGLLANGRMPTVLQCVNVSVVSEEVCSKLYDPLYHPSMFC 162 (223)
T ss_dssp TCSCCEEEEESSCCCCCSSCCCCCBCSSCCCTTCEEEEEESCCCTTSCCCSBCEEEEEEBCCHHHHHHHSTTTCCTTEEE
T ss_pred CcCcEEEEEECCcccCCCceecccCCCCCCCCCCEEEEEeCcccCCCCCCCcceEEEEEEeCHHHhhhhhCCCCCCCeEe
Confidence 3699999998763 3446788888753 356789999998754221 112223333322222111111223466
Q ss_pred Ec-----ccCCCCCCCCeeecCCCeEEEEEeecccc-CccccccccccHHHHHHHHHHH
Q 009784 266 ID-----AAINSGNSGGPAFNDKGKCVGIAFQSLKH-EDVENIGYVIPTPVIMHFIQDY 318 (526)
Q Consensus 266 ~d-----a~i~~G~SGGPlvn~~G~VVGI~~~~~~~-~~~~~~~~aIP~~~i~~~l~~l 318 (526)
.. ...|.|+|||||+. +|.++||++.+... .....-+...-+....+++++.
T Consensus 163 a~~~~~~~~~C~GDsGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~ 220 (223)
T 2bdg_A 163 AGGGQDQKDSCNGDSGGPLIC-NGYLQGLVSFGKAPCGQVGVPGVYTNLCKFTEWIEKT 220 (223)
T ss_dssp ECCSTTCCBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEECGGGTHHHHHHH
T ss_pred ccCCCCCCCcCCCCCCchheE-ccEEEEEEEecCCCCCCCCCCcEEEEHHHhHHHHHHH
Confidence 53 35789999999997 57999999876421 1112223344444455555543
No 52
>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation, hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG; 2.30A {Homo sapiens} PDB: 2psy_A*
Probab=99.40 E-value=4.4e-12 Score=122.65 Aligned_cols=184 Identities=14% Similarity=0.139 Sum_probs=108.9
Q ss_pred eeCCCCCCccccCCC---cceEEEEEEEeCCEEEecccccCCCCeEEEEEcC---------CCcEEEEEEEEecc-----
Q 009784 132 HTEPNFSLPWQRKRQ---YSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRG---------SDTKYLATVLAIGT----- 194 (526)
Q Consensus 132 ~~~~~~~~P~~~~~~---~~~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~---------~g~~~~a~vv~~d~----- 194 (526)
......++||+.... ....|+|.+|++.||||+|||+.+. +.|++.. ..+.+..+-+..++
T Consensus 5 ~~a~~~~~Pw~v~l~~~~~~~~CgGtLIs~~~VLTAAHC~~~~--~~v~~G~~~~~~~~~~~~~~~~v~~~~~Hp~y~~~ 82 (227)
T 2psx_A 5 SDCDMHTQPWQAALLLRPNQLYCGAVLVHPQWLLTAAHCRKKV--FRVRLGHYSLSPVYESGQQMFQGVKSIPHPGYSHP 82 (227)
T ss_dssp EECCTTSCTTEEEEEETTTEEEEEEEEEETTEEEECGGGCCSS--CEEEESCCBSSCCCCTTCEEEEEEEEEECTTCCSS
T ss_pred EECCCCCCCCEEEEEecCCCceEEEEEEcCCEEEEhHHcCCCC--cEEEEeeeecccCCCCCcEEEEEEEEEeCCCCCCC
Confidence 344556678876432 3468999999999999999999753 4454421 12344444444544
Q ss_pred --CCCeEEEEecccc-cccCceeeecCCC-CcCCCcEEEEeeCCCCCc--------eeEEEEEEeceeeeeccCCceeee
Q 009784 195 --ECDIAMLTVEDDE-FWEGVLPVEFGEL-PALQDAVTVVGYPIGGDT--------ISVTSGVVSRIEILSYVHGSTELL 262 (526)
Q Consensus 195 --~~DlAlLkv~~~~-~~~~~~pl~l~~~-~~~g~~V~~iG~p~~~~~--------~sv~~GiVs~~~~~~~~~~~~~~~ 262 (526)
.+||||||++.+. +...+.|+.|... ...++.+++.||...... ..+..-+++...+...........
T Consensus 83 ~~~~DIALl~L~~~~~~~~~v~pi~l~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~ 162 (227)
T 2psx_A 83 GHSNDLMLIKLNRRIRPTKDVRPINVSSHCPSAGTKCLVSGWGTTKSPQVHFPKVLQCLNISVLSQKRCEDAYPRQIDDT 162 (227)
T ss_dssp SCTTCCEEEEESSCCCCCSSSCCCCBCSSCCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEBCCHHHHHHHSTTTCCTT
T ss_pred CCCCCEEEEEeCCCCCCCCceeeeECCCCCCCCCCEEEEEeCcccCCCCCCCCchheEEEEEecCHhHhhhhcCCCCCCC
Confidence 4699999999763 3446788888753 356789999998653211 112222333222221111111123
Q ss_pred EEEEc----ccCCCCCCCCeeecCCCeEEEEEeecc-ccCccccccccccHHHHHHHHHHH
Q 009784 263 GLQID----AAINSGNSGGPAFNDKGKCVGIAFQSL-KHEDVENIGYVIPTPVIMHFIQDY 318 (526)
Q Consensus 263 ~i~~d----a~i~~G~SGGPlvn~~G~VVGI~~~~~-~~~~~~~~~~aIP~~~i~~~l~~l 318 (526)
+++.. ...|.|+|||||+. +|.++||++.+. .-.....-+....+...++++++.
T Consensus 163 ~~Ca~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~ 222 (227)
T 2psx_A 163 MFCAGDKAGRDSCQGDSGGPVVC-NGSLQGLVSWGDYPCARPNRPGVYTNLCKFTKWIQET 222 (227)
T ss_dssp EEEECCSTTCBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEEGGGCHHHHHHH
T ss_pred EEcccCCCCCccCCCCCCcceee-CCEEEEEEeecCCCCCCCCCCcEEEEHHHhHHHHHHH
Confidence 45553 35789999999997 579999998762 211112223344444455555544
No 53
>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI, protein-protein interaction, non-cognate binding, S1 pocket, primary specificity; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E 1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A 1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ...
Probab=99.40 E-value=6e-12 Score=123.17 Aligned_cols=196 Identities=17% Similarity=0.144 Sum_probs=116.4
Q ss_pred CCeEEEEeeeeCCCCCCccccCCC---cceEEEEEEEeCCEEEecccccCCCCeEEEEEcC--------CCcEEEEEEEE
Q 009784 123 DAVVKVFCVHTEPNFSLPWQRKRQ---YSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRG--------SDTKYLATVLA 191 (526)
Q Consensus 123 ~SVV~I~~~~~~~~~~~P~~~~~~---~~~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~--------~g~~~~a~vv~ 191 (526)
..+-+|.........++||+.... ....|+|.+|++.||||+|||+.+. ...|.+.. ..+.+..+-+.
T Consensus 11 ~~~~rIvgG~~a~~~~~Pw~v~l~~~~~~~~CgGtLI~~~~VLTAAHC~~~~-~~~v~~G~~~~~~~~~~~~~~~v~~i~ 89 (245)
T 1t8o_A 11 SGLSRIVNGEEAVPGSWPWQVSLQDKTGFHFCGGSLINENWVVTAAHCGVTT-SDVVVAGEFDQGSSSEKIQKLKIAKVF 89 (245)
T ss_dssp C----CBTCEECCTTSSTTEEEEECTTCCEEEEEEEEETTEEEECGGGCCCT-TSEEEESCSBTTCSSSCCEEEEEEEEE
T ss_pred cCCCceECCEECCCCCCCceEEEEcCCCCeEEEEEEeeCCEEEEcHHhCcCC-CcEEEEeeeecCCCCCCcEEEEEEEEE
Confidence 344567777777778889977542 2357999999999999999999763 34455421 12344554455
Q ss_pred ecc-------CCCeEEEEecccc-cccCceeeecCCCC---cCCCcEEEEeeCCCCC--------ceeEEEEEEeceeee
Q 009784 192 IGT-------ECDIAMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGD--------TISVTSGVVSRIEIL 252 (526)
Q Consensus 192 ~d~-------~~DlAlLkv~~~~-~~~~~~pl~l~~~~---~~g~~V~~iG~p~~~~--------~~sv~~GiVs~~~~~ 252 (526)
.++ .+||||||++.+. +.+.+.|+.|.... ..++.+++.||..... ...+..-+++...+.
T Consensus 90 ~hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~ 169 (245)
T 1t8o_A 90 KNSKYNSLTINNDITLLKLSTAASFSQTVSAVCLPSASDDFAAGTTCVTTGWGLTRYTNANTPDRLQQASLPLLSNTNCK 169 (245)
T ss_dssp ECTTCCTTTCCSCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSCC--CCCCSBCEEEEEEEECHHHHH
T ss_pred eCCCCCCCCCCCCEEEEEECCCCcCCCceeeeECCCCccCCCCCCEEEEEEeCCCCCCCCCCcchheEEEEeeEcchhhh
Confidence 554 3699999998763 44567888886532 3578899999864321 112333344433332
Q ss_pred eccCCceeeeEEEEc---ccCCCCCCCCeeecC-CC--eEEEEEeeccccCccccccccccHHHHHHHHHHHH
Q 009784 253 SYVHGSTELLGLQID---AAINSGNSGGPAFND-KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYE 319 (526)
Q Consensus 253 ~~~~~~~~~~~i~~d---a~i~~G~SGGPlvn~-~G--~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l~ 319 (526)
..........+++.. ...+.|+|||||+.. +| .++||++.+..-.....-+....+....+++++..
T Consensus 170 ~~~~~~~~~~~~Ca~~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~~c~~~~~p~vyt~V~~~~~WI~~~~ 242 (245)
T 1t8o_A 170 KYWGTKIKDAMICAGASGVSSCMGDSGGPLVCKKNGAWTLVGIVSWGSSTCSTSTPGVYARVTALVNWVQQTL 242 (245)
T ss_dssp HHHGGGCCTTEEEEECSSCBCCTTCTTCEEEEEETTEEEEEEEEEECCTTCCTTSEEEEEEGGGTHHHHHHHH
T ss_pred HhhcCcCCCceEEccCCCCccCcccCcCCEEEEECCEEEEEEEEEeCCCCCCCCCCEEEEEHHHHHHHHHHHH
Confidence 211111111245542 357899999999865 45 79999987653211122233444445555555543
No 54
>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A
Probab=99.39 E-value=8.5e-12 Score=120.53 Aligned_cols=181 Identities=17% Similarity=0.144 Sum_probs=107.7
Q ss_pred eCCCCCCccccCCC----c-ceEEEEEEEeCCEEEecccccCCCCeEEEEEcC--------CCcEEEEEEEEecc-----
Q 009784 133 TEPNFSLPWQRKRQ----Y-SSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRG--------SDTKYLATVLAIGT----- 194 (526)
Q Consensus 133 ~~~~~~~P~~~~~~----~-~~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~--------~g~~~~a~vv~~d~----- 194 (526)
.....++||+.... . ...|+|.+|++.||||+|||+.+ .+.|.+.. ..+.+..+-+..++
T Consensus 6 ~a~~~~~Pw~v~l~~~~~~~~~~CgGtLI~~~~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~ 83 (227)
T 1iau_A 6 EAKPHSRPYMAYLMIWDQKSLKRCGGFLIRDDFVLTAAHCWGS--SINVTLGAHNIKEQEPTQQFIPVKRPIPHPAYNPK 83 (227)
T ss_dssp ECCTTSSTTEEEEEEECSSCEEEEEEEEEETTEEEECGGGCCS--EEEEEESCSBTTSCCTTCEEEEEEEEEECTTCCTT
T ss_pred ECCCCCcCcEEEEEEECCCCceEEEEEEEcCCEEEECHHhCCC--ceEEEEccccccCCCCccEEEEEEEEECCCCCCCC
Confidence 33445566655321 1 36899999999999999999975 46666531 12345555555554
Q ss_pred --CCCeEEEEecccc-cccCceeeecCCCC---cCCCcEEEEeeCCCCCc-------eeEEEEEEeceeeeeccCCc-ee
Q 009784 195 --ECDIAMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGDT-------ISVTSGVVSRIEILSYVHGS-TE 260 (526)
Q Consensus 195 --~~DlAlLkv~~~~-~~~~~~pl~l~~~~---~~g~~V~~iG~p~~~~~-------~sv~~GiVs~~~~~~~~~~~-~~ 260 (526)
.+||||||++.+. +...+.|+.|.... ..++.+++.||...... ..+..-+++...+....... ..
T Consensus 84 ~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~g~~~~v~GwG~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~ 163 (227)
T 1iau_A 84 NFSNDIMLLQLERKAKRTRAVQPLRLPSNKAQVKPGQTCSVAGWGQTAPLGKHSHTLQEVKMTVQEDRKCESDLRHYYDS 163 (227)
T ss_dssp TCTTCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESSCSSSSSCCCSBCEEEEEEBCCHHHHHHHTTTTCCT
T ss_pred CCCCCeEEEEECCcccCCCceecccCCCCCCCCCCCCEEEEEEcccCCCCCCcCceeeEeeeeeechHHhhhHhccccCC
Confidence 3699999998763 34467888887533 45789999998653211 11222223322222111111 11
Q ss_pred eeEEEEc-----ccCCCCCCCCeeecCCCeEEEEEeeccccCccccccccccHHHHHHHHHHH
Q 009784 261 LLGLQID-----AAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDY 318 (526)
Q Consensus 261 ~~~i~~d-----a~i~~G~SGGPlvn~~G~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l 318 (526)
...++.. ...+.|+|||||+. +|.++||++.+.. ....-+....+....+++++.
T Consensus 164 ~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~gc~--~~~~p~vyt~v~~~~~WI~~~ 223 (227)
T 1iau_A 164 TIELCVGDPEIKKTSFKGDSGGPLVC-NKVAQGIVSYGRN--NGMPPRACTKVSSFVHWIKKT 223 (227)
T ss_dssp TTEEEESCTTSCCBCCTTCTTSEEEE-TTEEEEEEEEECT--TSCSCEEEEEGGGGHHHHHHH
T ss_pred CcEEEeECCCCCCeeeecCCCchheE-eeEEEEEEeEecC--CCCCCeEEEEHHHHHHHHHHH
Confidence 1145553 35789999999998 5799999987631 111223334444455555554
No 55
>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double six-stranded beta-barrels, hydrola glycosylation; HET: NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB: 3s9b_A* 3s9a_A* 3sbk_A*
Probab=99.39 E-value=7.3e-12 Score=121.17 Aligned_cols=187 Identities=14% Similarity=0.086 Sum_probs=113.0
Q ss_pred eeCCCCCCccccCCC----cceEEEEEEEeCCEEEecccccCCCCeEEEEEcCC-------CcE--EEEEEEEecc----
Q 009784 132 HTEPNFSLPWQRKRQ----YSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGS-------DTK--YLATVLAIGT---- 194 (526)
Q Consensus 132 ~~~~~~~~P~~~~~~----~~~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~~-------g~~--~~a~vv~~d~---- 194 (526)
......++||..... ....|+|.+|++.||||+|||+... +.|.+... ... +....+..++
T Consensus 5 ~~a~~~~~Pw~v~l~~~~~~~~~CgGtLI~~~~VLTAAHC~~~~--~~v~~g~~~~~~~~~~~~~~~~~~~~~~h~~~~~ 82 (234)
T 3s9c_A 5 DECNINEHPFLVALYTSASSTIHCAGALINREWVLTAAHCDRRN--IRIKLGMHSKNIRNEDEQIRVPRGKYFCLNTKFP 82 (234)
T ss_dssp EECCTTSCTTEEEEEETTEEEEEEEEEEEETTEEEECGGGCCTT--EEEEESCSSSSSCCTTCEEECEEEEECCSSCSST
T ss_pred eeCCCCCCCeEEEEEECCCCcEEEeeEEeeCCEEEEchhhcCCC--ceEEEeecccccccCCcceEEeeeEEEeCCCCCC
Confidence 334455667765432 2357999999999999999999754 44544210 111 1222232233
Q ss_pred ---CCCeEEEEecccc-cccCceeeecCCC-CcCCCcEEEEeeCCCCC------ceeEEEEEEeceeeeeccC-Cceeee
Q 009784 195 ---ECDIAMLTVEDDE-FWEGVLPVEFGEL-PALQDAVTVVGYPIGGD------TISVTSGVVSRIEILSYVH-GSTELL 262 (526)
Q Consensus 195 ---~~DlAlLkv~~~~-~~~~~~pl~l~~~-~~~g~~V~~iG~p~~~~------~~sv~~GiVs~~~~~~~~~-~~~~~~ 262 (526)
.+||||||++.+. +...+.|+.|... ...++.+++.||..... .......+++...+..... ......
T Consensus 83 ~~~~~DIALl~L~~~v~~~~~v~pi~L~~~~~~~~~~~~v~GwG~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~ 162 (234)
T 3s9c_A 83 NGLDKDIMLIRLRRPVTYSTHIAPVSLPSRSRGVGSRCRIMGWGKISTTTYPDVPHCTNIFIVKHKWCEPLYPWVPADSR 162 (234)
T ss_dssp TCGGGCCEEEEESSCCCCBTTBCCCBCCSSCCCTTCEEEEEESSCSBTTBCCSSCEEEEEEEECGGGTTTTCTTSCTTSS
T ss_pred CCCcCceEEEEECCccccCCcccccccCCCCCCCCCeEEEEeeCCCCCCCCCccccccceEecCHHHhhhcccCCCCCcc
Confidence 3599999998763 4456888888754 35689999999964321 1234444555444432211 111122
Q ss_pred EEEEc-----ccCCCCCCCCeeecCCCeEEEEEeeccccCc-cccccccccHHHHHHHHHHHHHc
Q 009784 263 GLQID-----AAINSGNSGGPAFNDKGKCVGIAFQSLKHED-VENIGYVIPTPVIMHFIQDYEKN 321 (526)
Q Consensus 263 ~i~~d-----a~i~~G~SGGPlvn~~G~VVGI~~~~~~~~~-~~~~~~aIP~~~i~~~l~~l~~~ 321 (526)
+++.. ...|.|+|||||+. +++++||++.+...-+ ...-+....+...++++++..+.
T Consensus 163 ~~Ca~~~~~~~~~C~GDSGgPl~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~i~~ 226 (234)
T 3s9c_A 163 TLCAGILKGGRDTCHGDSGGPLIC-NGEMHGIVAGGSEPCGQHLKPAVYTKVFDYNNWIQSIIAG 226 (234)
T ss_dssp EEEEECTTSSCBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHHT
T ss_pred eEEeecCCCCCccCCCCCCCeEEE-eCCcEEEEEEeCCCCCCCCCCcEEEEhHHhHHHHHHHHcC
Confidence 45552 36789999999997 6789999988653111 12234455556667777776553
No 56
>2xw9_A Complement factor D; immune system, hydrolase, serine protease, alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB: 2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A 1fdp_A 2xwa_A 1dst_A 4d9q_A
Probab=99.38 E-value=8.5e-12 Score=120.43 Aligned_cols=184 Identities=17% Similarity=0.204 Sum_probs=109.7
Q ss_pred CCCCCCccccCCC--cceEEEEEEEeCCEEEecccccCCCC--eEEEEEcCC--------CcEEEEEEEEecc-------
Q 009784 134 EPNFSLPWQRKRQ--YSSSSSGFAIGGRRVLTNAHSVEHYT--QVKLKKRGS--------DTKYLATVLAIGT------- 194 (526)
Q Consensus 134 ~~~~~~P~~~~~~--~~~~GSGfvI~~g~ILT~aHvV~~~~--~i~V~~~~~--------g~~~~a~vv~~d~------- 194 (526)
....++||..... ....|+|.+|++.+|||+|||+.+.. .+.|.+... .+.+..+-+..++
T Consensus 7 a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~ 86 (228)
T 2xw9_A 7 AEAHARPYMASVQLNGAHLCGGVLVAEQWVLSAAHCLEDAADGKVQVLLGAHSLSQPEPSKRLYDVLRAVPHPDSQPDTI 86 (228)
T ss_dssp CCTTSCTTEEEEEETTEEEEEEEEEETTEEEECGGGGSSCTTCCEEEEESCSBSSSCCTTCEEEEEEEEEECTTCCTTCC
T ss_pred CCCCCCCcEEEEEECCCeEEEEEEEeCCEEEEcHHhCCCCCCCceEEEEcccccCCCCCcceEEEEEEEEeCCCCCCCCC
Confidence 3445566665432 23679999999999999999997543 677876421 2345555555554
Q ss_pred CCCeEEEEecccc-cccCceeeecCCC---CcCCCcEEEEeeCCCCC-------ceeEEEEEEeceeeeeccC--Cceee
Q 009784 195 ECDIAMLTVEDDE-FWEGVLPVEFGEL---PALQDAVTVVGYPIGGD-------TISVTSGVVSRIEILSYVH--GSTEL 261 (526)
Q Consensus 195 ~~DlAlLkv~~~~-~~~~~~pl~l~~~---~~~g~~V~~iG~p~~~~-------~~sv~~GiVs~~~~~~~~~--~~~~~ 261 (526)
.+||||||++.+. +...+.|+.|... ...++.+++.||..... ...+..-+++...+..... +....
T Consensus 87 ~~DIAll~L~~~~~~~~~v~pi~l~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~ 166 (228)
T 2xw9_A 87 DHDLLLLQLSEKATLGPAVRPLPWQRVDRDVAPGTLCDVAGWGIVNHAGRRPDSLQHVLLPVLDRATCNRRTHHDGAITE 166 (228)
T ss_dssp TTCCEEEEESSCCCCBTTBCCCCBCCSCCCCCTTC-CEEEESSCCSTTCCCCSBCEEEECCEECHHHHTSTTTTTTCCCT
T ss_pred CCcEEEEEeCCCcccCCCeeecccCCcccCCCCCCEEEEEEecccCCCCCCCchheEEEEEEcChhHhcCccccCCcccC
Confidence 3699999998763 3445778877652 24578899999864321 1122333444333322111 11112
Q ss_pred eEEEEc---ccCCCCCCCCeeecCCCeEEEEEeeccccCc-cccccccccHHHHHHHHHHH
Q 009784 262 LGLQID---AAINSGNSGGPAFNDKGKCVGIAFQSLKHED-VENIGYVIPTPVIMHFIQDY 318 (526)
Q Consensus 262 ~~i~~d---a~i~~G~SGGPlvn~~G~VVGI~~~~~~~~~-~~~~~~aIP~~~i~~~l~~l 318 (526)
.+++.. ...+.|+|||||+. +|.++||++.+...-+ ....+....+...++++++.
T Consensus 167 ~~~Ca~~~~~~~C~GDsGgPL~~-~~~l~Gi~s~g~~~C~~~~~p~vyt~V~~~~~WI~~~ 226 (228)
T 2xw9_A 167 RLMCAESNRRDSCKGDAGGPLVC-GGVLEGVVTSGSRVCGNRKKPGIYTRVASYAAWIDSV 226 (228)
T ss_dssp TEEEECCSSCBCCTTCTTCEEEE-TTEEEEEECCSCCCSSCTTSCEEEEEGGGGHHHHHHH
T ss_pred CEEecCCCCCccCCCCCcccEEE-CCEEEEEEeecCCcCCCCCCCcEEEEHHHHHHHHHHH
Confidence 345553 36789999999998 6799999987541111 12233444455555555543
No 57
>1a7s_A Heparin binding protein; serine protease homolog, endotoxin binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2 PDB: 1ae5_A* 1fy3_A* 1fy1_A*
Probab=99.38 E-value=7.7e-12 Score=120.58 Aligned_cols=179 Identities=14% Similarity=0.131 Sum_probs=109.3
Q ss_pred eeCCCCCCccccCCC--cceEEEEEEEeCCEEEecccccCCC--CeEEEEEcCC-----C----cEEEEEEEEec-----
Q 009784 132 HTEPNFSLPWQRKRQ--YSSSSSGFAIGGRRVLTNAHSVEHY--TQVKLKKRGS-----D----TKYLATVLAIG----- 193 (526)
Q Consensus 132 ~~~~~~~~P~~~~~~--~~~~GSGfvI~~g~ILT~aHvV~~~--~~i~V~~~~~-----g----~~~~a~vv~~d----- 193 (526)
......++||..... ....|+|.+|++.+|||+|||+.+. ..+.|.+... + ..+..+-+..+
T Consensus 5 ~~a~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~V~~G~~~~~~~~~~~~~~~~v~~i~~h~y~~~ 84 (225)
T 1a7s_A 5 RKARPRQFPFLASIQNQGRHFCGGALIHARFVMTAASCFQSQNPGVSTVVLGAYDLRRRERQSRQTFSISSMSENGYDPQ 84 (225)
T ss_dssp EECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECGGGC----CCSEEEEESCSSTTSCCTTTCEEEEEEEEECSSCBTT
T ss_pred EECCCCCCCcEEEEecCCCcEEEEEEeeCCEEEEchhccCCCCCCceEEEEeeeECCCCCCcceeEEeEEEEecccccCC
Confidence 344455677766432 3457999999999999999999753 4577776421 1 33444434333
Q ss_pred -cCCCeEEEEecccc-cccCceeeecCCCC---cCCCcEEEEeeCCCCCc-------eeEEEEEEeceeeeeccCCceee
Q 009784 194 -TECDIAMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGDT-------ISVTSGVVSRIEILSYVHGSTEL 261 (526)
Q Consensus 194 -~~~DlAlLkv~~~~-~~~~~~pl~l~~~~---~~g~~V~~iG~p~~~~~-------~sv~~GiVs~~~~~~~~~~~~~~ 261 (526)
..+||||||++.+. +...+.|+.|.... ..++.+++.||...... ..+..-+++...+..
T Consensus 85 ~~~~DIALl~L~~~~~~~~~v~pi~L~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~-------- 156 (225)
T 1a7s_A 85 QNLNDLMLLQLDREANLTSSVTILPLPLQNATVEAGTRCQVAGWGSQRSGGRLSRFPRFVNVTVTPEDQCRP-------- 156 (225)
T ss_dssp TTBSCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESCCSSTTCCCCSSCEEEEEEECCGGGSCT--------
T ss_pred CCcCCEEEEEcCCcccCCCceeEEEcCCCcCCCCCCCEEEEEeCCcCCCCCCcccccceeeeEECCHHHhcc--------
Confidence 34799999998763 34457888776432 45789999998754211 112222333222211
Q ss_pred eEEEE-----cccCCCCCCCCeeecCCCeEEEEEeeccccCccccccccccHHHHHHHHHHHHH
Q 009784 262 LGLQI-----DAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEK 320 (526)
Q Consensus 262 ~~i~~-----da~i~~G~SGGPlvn~~G~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 320 (526)
.+++. ....|.|+|||||+.. |.++||++.+...-+.. -+....+...++++++..+
T Consensus 157 ~~~Ca~~~~~~~~~C~GDSGgPl~~~-g~l~Gi~S~g~~~C~~~-p~vyt~V~~~~~WI~~~~~ 218 (225)
T 1a7s_A 157 NNVCTGVLTRRGGICNGDGGTPLVCE-GLAHGVASFSLGPCGRG-PDFFTRVALFRDWIDGVLN 218 (225)
T ss_dssp TEEEEECSSSSCBCCTTCTTCEEEET-TEEEEEEEEECSSTTSS-CEEEEEGGGGHHHHHHHHH
T ss_pred CceEEeccCCCCCcccCCCcchheeC-CEEEEEEEEccCCcCCC-CcEEEEhHHhHHHHHHHhc
Confidence 23444 2367899999999985 79999998763211111 3445555666677766654
No 58
>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein, zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo sapiens} SCOP: b.47.1.2
Probab=99.38 E-value=8e-12 Score=120.02 Aligned_cols=150 Identities=20% Similarity=0.204 Sum_probs=95.5
Q ss_pred eCCCCCCccccCCC-----cceEEEEEEEeCCEEEecccccCCCC--eEEEEEcCC--------CcEEEEEEEEec----
Q 009784 133 TEPNFSLPWQRKRQ-----YSSSSSGFAIGGRRVLTNAHSVEHYT--QVKLKKRGS--------DTKYLATVLAIG---- 193 (526)
Q Consensus 133 ~~~~~~~P~~~~~~-----~~~~GSGfvI~~g~ILT~aHvV~~~~--~i~V~~~~~--------g~~~~a~vv~~d---- 193 (526)
.....++||..... ....|+|.+|++.+|||+|||+.+.. .+.|.+... ...+..+-+..+
T Consensus 6 ~a~~~~~Pw~v~l~~~~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~h~y~~ 85 (221)
T 1fuj_A 6 EAQPHSRPYMASLQMRGNPGSHFCGGTLIHPSFVLTAAHCLRDIPQRLVNVVLGAHNVRTQEPTQQHFSVAQVFLNNYDA 85 (221)
T ss_dssp ECCTTSCTTEEEEEETTBTTCCCEEEEEEETTEEEECGGGGSSSCGGGEEEEESCSBTTSCCTTCEEEEEEEEEECCCBT
T ss_pred ECCCCCcCCEEEEEEecCCCCEEEEEEEecCCEEEEchHhcCcCCCCceEEEEeeeeccCCCCceEEEEEEEEEeCCCCC
Confidence 34445566655321 23679999999999999999998643 577776421 233444333332
Q ss_pred --cCCCeEEEEecccc-cccCceeeecCCCC---cCCCcEEEEeeCCCCCc-------eeEEEEEEeceeeeeccCCcee
Q 009784 194 --TECDIAMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGDT-------ISVTSGVVSRIEILSYVHGSTE 260 (526)
Q Consensus 194 --~~~DlAlLkv~~~~-~~~~~~pl~l~~~~---~~g~~V~~iG~p~~~~~-------~sv~~GiVs~~~~~~~~~~~~~ 260 (526)
..+||||||++.+. +...+.|+.|.... ..++.+++.||...... ..+..-++ ...+.
T Consensus 86 ~~~~~DiALl~L~~~~~~~~~v~picL~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~~~-~~~C~-------- 156 (221)
T 1fuj_A 86 ENKLNDILLIQLSSPANLSASVATVQLPQQDQPVPHGTQCLAMGWGRVGAHDPPAQVLQELNVTVV-TFFCR-------- 156 (221)
T ss_dssp TTTBCCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSCSSSCBCSBCEEEEEEEE-CTTCC--------
T ss_pred CCCcccEEEEEeCCccccCCcceeeECCCCcCCCCCCCEEEEEEeCCCCCCCCHHHHhhcccceEE-eeecC--------
Confidence 34799999999763 34568888887533 45789999998654211 11112222 11111
Q ss_pred eeEEEE-----cccCCCCCCCCeeecCCCeEEEEEee
Q 009784 261 LLGLQI-----DAAINSGNSGGPAFNDKGKCVGIAFQ 292 (526)
Q Consensus 261 ~~~i~~-----da~i~~G~SGGPlvn~~G~VVGI~~~ 292 (526)
...++. ....|.|+|||||+. +|.++||++.
T Consensus 157 ~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~s~ 192 (221)
T 1fuj_A 157 PHNICTFVPRRKAGICFGDSGGPLIC-DGIIQGIDSF 192 (221)
T ss_dssp TTEEEEECSSSSCBCCTTCTTCEEEE-TTEEEEEEEE
T ss_pred CceeeeccCCCCCCCCCCCCCCeeEE-CCEEeEEEEE
Confidence 113443 246789999999998 6899999987
No 59
>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes, fibrinogen binding, glycosylati hydrolase; 1.43A {Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 4gso_A 1bqy_A*
Probab=99.38 E-value=1e-11 Score=120.03 Aligned_cols=188 Identities=17% Similarity=0.110 Sum_probs=111.9
Q ss_pred eeCCCCCCccccCC--CcceEEEEEEEeCCEEEecccccCCCCeEEEEEcC------CCcE-EEEEEEEecc-------C
Q 009784 132 HTEPNFSLPWQRKR--QYSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRG------SDTK-YLATVLAIGT-------E 195 (526)
Q Consensus 132 ~~~~~~~~P~~~~~--~~~~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~------~g~~-~~a~vv~~d~-------~ 195 (526)
......++||.... .....|+|.+|++.||||+|||+.....+.+-... +... ...+.+..++ .
T Consensus 5 ~~a~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~ 84 (234)
T 3s69_A 5 DECNINEHRSLVAFFNSTGFFCSGTLINEEWVLTAAHCDNTNFQMKLGVHSKKVLNEDEQTRNPKEKFICPNKKNDEVLD 84 (234)
T ss_dssp EECCTTSCTTEEEEECSSCEEEEEEEEETTEEEECGGGCCSSCEEEESCCCSSSCCTTCEEECEEEEEECTTCCTTCTTS
T ss_pred ccCCCCCCceEEEEeeCCCeEEeEEEeeCCEEEEchhhCCCCceEEecccccccccCCcceeeceEEEECCCccCCCCCc
Confidence 33445566776543 23468999999999999999999754443332211 1111 2233333333 3
Q ss_pred CCeEEEEecccc-cccCceeeecCCC-CcCCCcEEEEeeCCCCC--------ceeEEEEEEeceeeeeccC-CceeeeEE
Q 009784 196 CDIAMLTVEDDE-FWEGVLPVEFGEL-PALQDAVTVVGYPIGGD--------TISVTSGVVSRIEILSYVH-GSTELLGL 264 (526)
Q Consensus 196 ~DlAlLkv~~~~-~~~~~~pl~l~~~-~~~g~~V~~iG~p~~~~--------~~sv~~GiVs~~~~~~~~~-~~~~~~~i 264 (526)
+||||||++.+. +...+.|+.|... ...++.+++.||..... ...+...+++...+..... .......+
T Consensus 85 ~DIALl~L~~~v~~~~~v~pi~l~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~ 164 (234)
T 3s69_A 85 KDIMLIKLDSRVSNSEHIVPLSLPSSPPSVGSVCHIMGWGSITPIKVTYPDVPYCAYINLLDDAVCQAGYPELLTEYRTL 164 (234)
T ss_dssp SCCEEEEESSCCCCBTTBCCCCCCSSCCCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECHHHHHHHCTTCCTTSCEE
T ss_pred ccEEEEeeCCcCCCCCcceeeecCCCCCCCCCEEEEEECCCCCCCCcCcccccceeEEeecCHHHHhhhcccccCCcceE
Confidence 699999998763 4456788888653 35689999999865321 1223344444433322111 11112245
Q ss_pred EE-----cccCCCCCCCCeeecCCCeEEEEEeecccc-CccccccccccHHHHHHHHHHHHH
Q 009784 265 QI-----DAAINSGNSGGPAFNDKGKCVGIAFQSLKH-EDVENIGYVIPTPVIMHFIQDYEK 320 (526)
Q Consensus 265 ~~-----da~i~~G~SGGPlvn~~G~VVGI~~~~~~~-~~~~~~~~aIP~~~i~~~l~~l~~ 320 (526)
+. ....|.|+|||||+. +++++||++.+... .....-+....+...++++++..+
T Consensus 165 Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~ 225 (234)
T 3s69_A 165 CAGILEGGKDTCGGDSGGPLIC-NGQFQGIVSFGAHPCGQGLKPGVYTKVFDYNHWIQSIIA 225 (234)
T ss_dssp EEECTTCSCBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred eccCCCCCCccCCCCCccceEE-cCEEEEEEEEcccccCCCCCCcEEeeHHHHHHHHHHHhc
Confidence 54 246789999999997 67899999876531 111223445555666777776654
No 60
>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG; 1.70A {Homo sapiens}
Probab=99.38 E-value=9.5e-12 Score=120.88 Aligned_cols=184 Identities=16% Similarity=0.156 Sum_probs=110.4
Q ss_pred eeCCCCCCccccCCC--cceEEEEEEEeCCEEEecccccCCCCeEEEEEcC--------CCcEEEEEEEEecc-------
Q 009784 132 HTEPNFSLPWQRKRQ--YSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRG--------SDTKYLATVLAIGT------- 194 (526)
Q Consensus 132 ~~~~~~~~P~~~~~~--~~~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~--------~g~~~~a~vv~~d~------- 194 (526)
......++||+.... ....|+|.+|++.||||+|||+.+ .+.|.+.. ..+.+..+-+..++
T Consensus 5 ~~a~~~~~Pw~v~l~~~~~~~CgGsLIs~~~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~ 82 (238)
T 1spj_A 5 WECEQHSQPWQAALYHFSTFQCGGILVHRQWVLTAAHCISD--NYQLWLGRHNLFDDENTAQFVHVSESFPHPGFNMSLL 82 (238)
T ss_dssp EECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECGGGCCS--SEEEEESCSBTTSCCTTCEEECEEEEEECTTSCGGGG
T ss_pred EECCCCCCCcEEEEEeCCCeeEEEEEecCCEEEEcHHhCCC--CceEEEEeccccCCCCCceEEEEEEEEcCCCcccccc
Confidence 344556678876432 236899999999999999999975 45555531 12334444444443
Q ss_pred -----------CCCeEEEEecccc--cccCceeeecCCC-CcCCCcEEEEeeCCCCC--------ceeEEEEEEeceeee
Q 009784 195 -----------ECDIAMLTVEDDE--FWEGVLPVEFGEL-PALQDAVTVVGYPIGGD--------TISVTSGVVSRIEIL 252 (526)
Q Consensus 195 -----------~~DlAlLkv~~~~--~~~~~~pl~l~~~-~~~g~~V~~iG~p~~~~--------~~sv~~GiVs~~~~~ 252 (526)
.+||||||++.+. +...+.|+.|... ...++.+++.||..... ...+..-+++...+.
T Consensus 83 ~~~~~~~~~~~~~DIALl~L~~~~~~~~~~v~pi~L~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~ 162 (238)
T 1spj_A 83 ENHTRQADEDYSHDLMLLRLTEPADTITDAVKVVELPTEEPEVGSTCLASGWGSIEPENFSFPDDLQCVDLKILPNDECK 162 (238)
T ss_dssp CC--CTTTCCCTTCCEEEEESSCCCCSSTTCCCCCCCSSCCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEEECHHHHH
T ss_pred ccccccccccCCCCeEEEEECccccccCCceeeccCCCCCCCCCCEEEEEecCCCCCCCCCCcCcccEEEEeecCHHHhh
Confidence 3599999998763 4456788888753 35688999999864321 122334445443332
Q ss_pred eccCCceeeeEEEEc-----ccCCCCCCCCeeecCCCeEEEEEeeccccCc-cccccccccHHHHHHHHHHH
Q 009784 253 SYVHGSTELLGLQID-----AAINSGNSGGPAFNDKGKCVGIAFQSLKHED-VENIGYVIPTPVIMHFIQDY 318 (526)
Q Consensus 253 ~~~~~~~~~~~i~~d-----a~i~~G~SGGPlvn~~G~VVGI~~~~~~~~~-~~~~~~aIP~~~i~~~l~~l 318 (526)
..........+++.. ...|.|+|||||+. +|.++||++.+...-+ ...-+...-+....+++++.
T Consensus 163 ~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~ 233 (238)
T 1spj_A 163 KAHVQKVTDFMLCVGHLEGGKDTCVGDSGGPLMC-DGVLQGVTSWGYVPCGTPNKPSVAVRVLSYVKWIEDT 233 (238)
T ss_dssp HHCSSCCCTTEEEEECTTCSSBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHH
T ss_pred hhccCCCCCCeEEeeCCCCCCCCCCCCCCCcEEE-cCEEEEEEEeCCCCCCCCCCCeEEEEHHHhHHHHHHH
Confidence 221111112245553 36789999999997 5899999987632111 12223334444455555544
No 61
>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease, inhibitor, complex, protease-substrate interactions, collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2
Probab=99.38 E-value=3.8e-12 Score=123.03 Aligned_cols=185 Identities=18% Similarity=0.153 Sum_probs=113.1
Q ss_pred eeCCCCCCccccCCC--cceEEEEEEEeCCEEEecccccCCCCeEEEEEcCC--------CcEEEEEEEEecc-------
Q 009784 132 HTEPNFSLPWQRKRQ--YSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGS--------DTKYLATVLAIGT------- 194 (526)
Q Consensus 132 ~~~~~~~~P~~~~~~--~~~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~~--------g~~~~a~vv~~d~------- 194 (526)
......++||+.... ....|+|.+|++.||||+|||+.+...+.|.+... ...+..+-+..++
T Consensus 5 ~~a~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~ 84 (226)
T 1azz_A 5 VEAVPNSWPHQAALFIDDMYFCGGSLISPEWILTAAHCMDGAGFVDVVLGAHNIREDEATQVTIQSTDFTVHENYNSFVI 84 (226)
T ss_dssp EECCTTSSTTEEEEEETTTEEEEEEEEETTEEEECHHHHTTCSCEEEEESCSBSSSCCTTCEEEEECCEEECTTCBTTTT
T ss_pred EECCCCCcCCEEEEEECCcEEEEEEEecCCEEEEhHHhcCCCCceEEEEcceEcCCCCCccEEEEEEEEEECCCCCCCCC
Confidence 344456677766432 34689999999999999999999877888887421 1233333344444
Q ss_pred CCCeEEEEecccc-cccCceeeecCCCC-cCCCcEEEEeeCCCCCc--------eeEEEEEEeceeeeeccCCceeeeEE
Q 009784 195 ECDIAMLTVEDDE-FWEGVLPVEFGELP-ALQDAVTVVGYPIGGDT--------ISVTSGVVSRIEILSYVHGSTELLGL 264 (526)
Q Consensus 195 ~~DlAlLkv~~~~-~~~~~~pl~l~~~~-~~g~~V~~iG~p~~~~~--------~sv~~GiVs~~~~~~~~~~~~~~~~i 264 (526)
.+||||||++.+. +...+.|+.|.... ..++.+++.||...... ..+..-+++...+..... .....++
T Consensus 85 ~~DiALl~L~~~~~~~~~v~picL~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~-~~~~~~~ 163 (226)
T 1azz_A 85 SNDIAVIRLPVPVTLTAAIATVGLPSTDVGVGTVVTPTGWGLPSDSALGISDVLRQVDVPIMSNADCDAVYG-IVTDGNI 163 (226)
T ss_dssp BSCCEEEECSSCCCCCSSSCCCBCCSSCCCTTCEEEEEESSCSSTTCSSSCSBCEECCEEEECHHHHHHHHS-CCCTTEE
T ss_pred CCceEEEEECCccccCCCcccccCCCCCCCCCCEEEEEeCCccCCCCCCCCchhEEeeEEEEChhHhhhhhC-cCCCceE
Confidence 4799999998763 34467888887533 56789999998653210 112233444333322111 1111245
Q ss_pred EEc----ccCCCCCCCCeeecCCCeEEEEEeeccccC-ccccccccccHHHHHHHHHHH
Q 009784 265 QID----AAINSGNSGGPAFNDKGKCVGIAFQSLKHE-DVENIGYVIPTPVIMHFIQDY 318 (526)
Q Consensus 265 ~~d----a~i~~G~SGGPlvn~~G~VVGI~~~~~~~~-~~~~~~~aIP~~~i~~~l~~l 318 (526)
+.. ...|.|+|||||+. +|.++||++.+.... ....-+....+...++++++.
T Consensus 164 Ca~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~~C~~~~p~vyt~V~~~~~WI~~~ 221 (226)
T 1azz_A 164 CIDSTGGKGTCNGDSGGPLNY-NGLTYGITSFGAAAGCEAGYPDAFTRVTYFLDWIQTQ 221 (226)
T ss_dssp EECCTTTCBCCTTCTTCEEEE-TTEEEEEEEEEETTCTTSCCCEEEEESGGGHHHHHHH
T ss_pred eecCCCCCccCCCCCCcceEE-CCEEEEEEEEECCCCCCCCCCCEEEEHHHHHHHHHHH
Confidence 553 35789999999995 789999998765211 111223334444455555554
No 62
>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A, LUNG; chymotrypsin homology, hormone/growth factor complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A
Probab=99.38 E-value=1.9e-11 Score=119.05 Aligned_cols=183 Identities=11% Similarity=0.116 Sum_probs=111.2
Q ss_pred CCccccCCC--cceEEEEEEEeCCEEEecccccCCC--CeEEEEEcCC----------CcEEEEEEEEecc-CCCeEEEE
Q 009784 138 SLPWQRKRQ--YSSSSSGFAIGGRRVLTNAHSVEHY--TQVKLKKRGS----------DTKYLATVLAIGT-ECDIAMLT 202 (526)
Q Consensus 138 ~~P~~~~~~--~~~~GSGfvI~~g~ILT~aHvV~~~--~~i~V~~~~~----------g~~~~a~vv~~d~-~~DlAlLk 202 (526)
.+||..... ....|+|.+|++.||||+|||+.+. ..+.|.+... .+.+..+-+.+++ .+||||||
T Consensus 10 ~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~v~~~~~~p~~~DiALl~ 89 (240)
T 1si5_H 10 NIGWMVSLRYRNKHICGGSLIKESWVLTARQCFPSRDLKDYEAWLGIHDVHGRGDEKCKQVLNVSQLVYGPEGSDLVLMK 89 (240)
T ss_dssp CCTTEEEEEESSSEEEEEEEEETTEEEEEGGGCSSSCGGGEEEEESCSBSSCSTTTTTCEEEEEEEEEECSSTTCEEEEE
T ss_pred CCCeEEEEEeCCCeEEEEEEeeCCEEEEhHHhcCCCCCccEEEEEeeeecCCCCCCCcceEEEEEEEEcCCCCCcEEEEE
Confidence 566665432 2468999999999999999999754 4677776311 1234433333444 68999999
Q ss_pred ecccc-cccCceeeecCCC---CcCCCcEEEEeeCCCCC------ceeEEEEEEeceeeeeccCCc--eeeeEEEEc---
Q 009784 203 VEDDE-FWEGVLPVEFGEL---PALQDAVTVVGYPIGGD------TISVTSGVVSRIEILSYVHGS--TELLGLQID--- 267 (526)
Q Consensus 203 v~~~~-~~~~~~pl~l~~~---~~~g~~V~~iG~p~~~~------~~sv~~GiVs~~~~~~~~~~~--~~~~~i~~d--- 267 (526)
++.+. +.+.+.|+.|... ...++.+++.||..... ...+..-+++...+.....+. .....++..
T Consensus 90 L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~ 169 (240)
T 1si5_H 90 LARPAVLDDFVSTIDLPNYGSTIPEKTSCSVYGWGYTGLINYDGLLRVAHLYIMGNEKCSQHHRGKVTLNESEICAGAEK 169 (240)
T ss_dssp ESSCCCCSSSCCCCBCCCTTCCCCTTCEEEEEESSCCCCSSCCCBCEEEEEEEECGGGTCC-------CCTTEEEEECSS
T ss_pred ECCccccCCceeccCcCCcCCCCCCCCEEEEEEeCCCCCCCCCCeeEEEEEeecCHHHhhhhhcCCccCCCCEEeecCCC
Confidence 98763 3446788888753 23578899999865321 122334445444332221111 111245542
Q ss_pred --ccCCCCCCCCeeecCCC---eEEEEEeeccccCccccccccccHHHHHHHHHHHHH
Q 009784 268 --AAINSGNSGGPAFNDKG---KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEK 320 (526)
Q Consensus 268 --a~i~~G~SGGPlvn~~G---~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 320 (526)
...|.|+|||||+...+ .++||++.+..-......+....+...++++++..+
T Consensus 170 ~~~~~C~GDSGgPL~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~y~~WI~~~i~ 227 (240)
T 1si5_H 170 IGSGPCEGDYGGPLVCEQHKMRMVLGVIVPGRGCAIPNRPGIFVRVAYYAKWIHKIIL 227 (240)
T ss_dssp SCCBCCTTCTTCEEEEECSSSEEEEEEECSCSCSSCTTCCEEEEEGGGGHHHHHHHHS
T ss_pred CCCEeccCCCCCcEEEEECCcEEEEEEEEECCCCCCCCCCcEEEEHHHHHHHHHHHHh
Confidence 36789999999996533 799999876422111223444555566667766553
No 63
>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus scrofa} SCOP: b.47.1.2
Probab=99.38 E-value=1.5e-11 Score=119.95 Aligned_cols=162 Identities=19% Similarity=0.158 Sum_probs=102.8
Q ss_pred eCCCCCCccccCCCc------ceEEEEEEEeCCEEEecccccCCCCeEEEEEcCC--------CcEEEEEEEEeccC---
Q 009784 133 TEPNFSLPWQRKRQY------SSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGS--------DTKYLATVLAIGTE--- 195 (526)
Q Consensus 133 ~~~~~~~P~~~~~~~------~~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~~--------g~~~~a~vv~~d~~--- 195 (526)
.....++||+..... ...|+|.+|++.||||+|||+.....+.|.+... +..+..+-+..++.
T Consensus 6 ~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~ 85 (241)
T 1bru_P 6 DARPNSWPWQVSLQYDSSGQWRHTCGGTLVDQSWVLTAAHCISSSRTYRVVLGRHSLSTNEPGSLAVKVSKLVVHQDWNS 85 (241)
T ss_dssp ECCTTSSTTEEEEEEEETTEEEEEEEEEEEETTEEEECGGGCCTTSCEEEEESCSBSSSCCTTCEEEEEEEEEECTTCCT
T ss_pred ECCCCCcCcEEEEEEecCCceeeEEEeEEeeCCEEEEcHHhcccCCceEEEEEcccccCCCCccEEEEEEEEEECCCCCC
Confidence 344456677654321 3579999999999999999998556778877421 23445554555542
Q ss_pred ------CCeEEEEecccc-cccCceeeecCCCC---cCCCcEEEEeeCCCCC-------ceeEEEEEEeceeeeec-cCC
Q 009784 196 ------CDIAMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGD-------TISVTSGVVSRIEILSY-VHG 257 (526)
Q Consensus 196 ------~DlAlLkv~~~~-~~~~~~pl~l~~~~---~~g~~V~~iG~p~~~~-------~~sv~~GiVs~~~~~~~-~~~ 257 (526)
+||||||++.+. +.+.+.|+.|.... ..++.+++.||..... ...+..-+++...+... ..+
T Consensus 86 ~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~ 165 (241)
T 1bru_P 86 NQLSNGNDIALLKLASPVSLTDKIQLGCLPAAGTILPNNYVCYVTGWGRLQTNGASPDILQQGQLLVVDYATCSKPGWWG 165 (241)
T ss_dssp TCGGGCCCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESCCSSTTSCCCSBCEEEEEEEECHHHHTSTTTTG
T ss_pred CCCCCCCcEEEEEeCCCcccCCccCCcccCCCcCCCCCCCEEEEEEccccCCCCCCCccceeCEEEEecHHHhCcccccC
Confidence 799999998763 44567888886532 3578899999865321 12233444444333221 011
Q ss_pred -ceeeeEEEEc----ccCCCCCCCCeeecC--CC--eEEEEEeecc
Q 009784 258 -STELLGLQID----AAINSGNSGGPAFND--KG--KCVGIAFQSL 294 (526)
Q Consensus 258 -~~~~~~i~~d----a~i~~G~SGGPlvn~--~G--~VVGI~~~~~ 294 (526)
.....++++. ...|.|+|||||+.. +| .++||++.+.
T Consensus 166 ~~~~~~~~Ca~~~~~~~~C~GDSGgPL~~~~~~g~~~l~Gi~S~g~ 211 (241)
T 1bru_P 166 STVKTNMICAGGDGIISSCNGDSGGPLNCQGANGQWQVHGIVSFGS 211 (241)
T ss_dssp GGCCTTEEEECCSSSSBCCTTCTTCEEEEECTTSCEEEEEEEEECB
T ss_pred CcCCCceEeecCCCCCccCCCCCCCcEEEECCCCCEEEEEEEEEcC
Confidence 1112346653 357899999999854 46 7999998764
No 64
>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A* 4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A* 2hvx_A* 3s0n_A* 2rdl_A
Probab=99.38 E-value=2.8e-11 Score=116.48 Aligned_cols=182 Identities=18% Similarity=0.141 Sum_probs=111.7
Q ss_pred eCCCCCCccccCC------CcceEEEEEEEeCCEEEecccccCCCCeEEEEEcC--------CCcEEEEEEEEeccC---
Q 009784 133 TEPNFSLPWQRKR------QYSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRG--------SDTKYLATVLAIGTE--- 195 (526)
Q Consensus 133 ~~~~~~~P~~~~~------~~~~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~--------~g~~~~a~vv~~d~~--- 195 (526)
.....++||+... .....|+|.+|++.+|||+|||+. ..+.|.+.. ..+.+..+-+..++.
T Consensus 6 ~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLI~~~~VLTAAhC~~--~~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~y~~ 83 (226)
T 4ag1_A 6 ECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHCAG--RSITVTLGAHNITEEEDTWQKLEVIKQFRHPKYNT 83 (226)
T ss_dssp ECCTTSSTTEEEEEEECSSSSCEEEEEEEEETTEEEECGGGCC--SEEEEEESCSBTTSCCTTCEEEEEEEEEECTTCCT
T ss_pred ECCCCCCCcEEEEEEEcCCCcccEEEEEEEeCCEEEECcccCC--CCeEEEeCCcccCCCCCcceEEEEEEEEeCCCCCC
Confidence 3344456665422 124679999999999999999995 456676642 113345555556654
Q ss_pred ----CCeEEEEecccc-cccCceeeecCCCC---cCCCcEEEEeeCCCCC-------ceeEEEEEEeceeeeeccCCcee
Q 009784 196 ----CDIAMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGD-------TISVTSGVVSRIEILSYVHGSTE 260 (526)
Q Consensus 196 ----~DlAlLkv~~~~-~~~~~~pl~l~~~~---~~g~~V~~iG~p~~~~-------~~sv~~GiVs~~~~~~~~~~~~~ 260 (526)
+||||||++.+. +...+.|+.+.... ..++.+.+.||..... ...+...+++...+..+.. ...
T Consensus 84 ~~~~~DIALl~L~~~~~~~~~v~pi~l~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~-~~~ 162 (226)
T 4ag1_A 84 STLHHDIMLLKLKEKASLTLAVGTLPFPSQFNFVPPGRMCRVAGWGRTGVLKPGSDTLQEVKLRLMDPQACSHFRD-FDH 162 (226)
T ss_dssp TTCTTCCEEEEESSCCCCCSSSCCCCCC-----CCTTCEEEEEESSBSSTTSCBCSBCEEEEEEEECGGGGTTSTT-CCT
T ss_pred CCCcCcEEEEEECCCCccCCceeccccCCcccCCCCCCEEEEEECCCCCCCCCCCCEeEEEEEEEcChHHcccccC-cCc
Confidence 699999998753 34456777776432 4578999999864321 1233444454444431111 111
Q ss_pred eeEEEEc-----ccCCCCCCCCeeecCCCeEEEEEeeccccCccccccccccHHHHHHHHHHHHH
Q 009784 261 LLGLQID-----AAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEK 320 (526)
Q Consensus 261 ~~~i~~d-----a~i~~G~SGGPlvn~~G~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 320 (526)
...+++. ...+.|+|||||+. ++.++||++.+.... ..-+....+...++++++..+
T Consensus 163 ~~~~Ca~~~~~~~~~C~GDsGgPl~~-~~~l~Gi~S~g~~c~--~~p~vyt~v~~~~~WI~~~i~ 224 (226)
T 4ag1_A 163 NLQLCVGNPRKTKSAFKGDSGGPLLC-AGVAQGIVSYGRSDA--KPPAVFTRISHYRPWINQILQ 224 (226)
T ss_dssp TTEEEESCTTSCCBCCTTCTTCEEEE-TTEEEEEEEECBTTC--CSCEEEEEHHHHHHHHHHHHH
T ss_pred cceEeeccCCCCCcCccCCCCCceEE-cCEEEEEEEECCCCC--CCCCEEEEhHHHHHHHHHHHh
Confidence 1245553 35788999999997 689999998765321 124455666667777766543
No 65
>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase - serine proteinase (GAM inactive serine proteinase (alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP: b.47.1.2
Probab=99.37 E-value=4.3e-12 Score=123.63 Aligned_cols=190 Identities=15% Similarity=0.118 Sum_probs=104.1
Q ss_pred EEeeeeCCCCCCccccCCC--cceEEEEEEEeCCEEEecccccCCCCeEEEEEcC--------CCcEEEEEEEEecc---
Q 009784 128 VFCVHTEPNFSLPWQRKRQ--YSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRG--------SDTKYLATVLAIGT--- 194 (526)
Q Consensus 128 I~~~~~~~~~~~P~~~~~~--~~~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~--------~g~~~~a~vv~~d~--- 194 (526)
|.........++||+.... ....|+|.+|++.||||+|||+.+. +.|.+.. .+..+..+-+..++
T Consensus 4 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGsLIs~~~VLTAAHC~~~~--~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~ 81 (240)
T 1sgf_A 4 PVQSQVDCENSQPWHVAVYRFNKYQCGGVLLDRNWVLTAAHCYNDK--YQVWLGKNNFLEDEPSDQHRLVSKAIPHPDFN 81 (240)
T ss_dssp ---------CCCTTEEEEECTTSCCEEEEECSSSEEEECGGGCCSC--CEEEECC----C-CTTCEEEEEEEEEECTTSC
T ss_pred ccCCeECCCCCcCCEEEEEeCCCeEEEEEEecCCEEEECHHhCCCC--ceEEeCCcccccCCCCceEEEEEEEEcCCCCc
Confidence 4445555556778866442 2357999999999999999999743 4444421 12334444344432
Q ss_pred ---------------CCCeEEEEecccc-cccCceeeecCCC-CcCCCcEEEEeeCCCCCc--------eeEEEEEEece
Q 009784 195 ---------------ECDIAMLTVEDDE-FWEGVLPVEFGEL-PALQDAVTVVGYPIGGDT--------ISVTSGVVSRI 249 (526)
Q Consensus 195 ---------------~~DlAlLkv~~~~-~~~~~~pl~l~~~-~~~g~~V~~iG~p~~~~~--------~sv~~GiVs~~ 249 (526)
.+||||||++.+. +...+.|+.|... ...++.+++.||...... ..+..-+++..
T Consensus 82 ~~~~~~~~~~~~~~~~~DIALl~L~~~~~~~~~v~picL~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~ 161 (240)
T 1sgf_A 82 MSLLNEHTPQPEDDYSNDLMLLRLSKPADITDVVKPITLPTEEPKLGSTCLASGWGSTTPIKFKYPDDLQCVNLKLLPNE 161 (240)
T ss_dssp GGGC----CCTTCBCTTCCEEEEESSCCCCCSSCCCCCCCCSCCCTTCEEEEC-------C---------CEEEEEECTH
T ss_pred ccccccccccccCCCCCceEEEEeCCcCcCCCcccccCCCCCCCCCCCEEEEEecCCCCCCCCCCCccccEEeeeEeCHH
Confidence 3699999998763 3456888888753 356889999998643211 12233344433
Q ss_pred eeeeccCCceeeeEEEEc-----ccCCCCCCCCeeecCCCeEEEEEeecccc-CccccccccccHHHHHHHHHHHHH
Q 009784 250 EILSYVHGSTELLGLQID-----AAINSGNSGGPAFNDKGKCVGIAFQSLKH-EDVENIGYVIPTPVIMHFIQDYEK 320 (526)
Q Consensus 250 ~~~~~~~~~~~~~~i~~d-----a~i~~G~SGGPlvn~~G~VVGI~~~~~~~-~~~~~~~~aIP~~~i~~~l~~l~~ 320 (526)
.+...........+++.. ...|.|+|||||+. +|.++||++.+... .....-+....+...++++++..+
T Consensus 162 ~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~GI~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 237 (240)
T 1sgf_A 162 DCDKAHEMKVTDAMLCAGEMDGGSYTCEHDSGGPLIC-DGILQGITSWGPEPCGEPTEPSVYTKLIKFSSWIRETMA 237 (240)
T ss_dssp HHHTTCSSBCCTTEEEEEECSSSEEECCCCTTCEEEE-TTEEEEEECCCCSSCCCSSCCEEEEESGGGHHHHHHHHH
T ss_pred HhhhhhCCCcCCCeEeEccCCCCCCCCCCCCcCcEEE-ccEEEEEEEECCCCCCCCCCCeEEEeHHHHHHHHHHHHh
Confidence 332211111111245543 24789999999998 68999999876321 111222344444555666665543
No 66
>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor, disease mutation glycoprotein, hydrolase, zymogen, secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP: b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A* 1hne_E 2rg3_A* 1b0f_A*
Probab=99.37 E-value=5.2e-12 Score=121.26 Aligned_cols=176 Identities=15% Similarity=0.129 Sum_probs=105.7
Q ss_pred eeCCCCCCccccCCC--cceEEEEEEEeCCEEEecccccCCC--CeEEEEEcCC--------CcEEEEEEEEec------
Q 009784 132 HTEPNFSLPWQRKRQ--YSSSSSGFAIGGRRVLTNAHSVEHY--TQVKLKKRGS--------DTKYLATVLAIG------ 193 (526)
Q Consensus 132 ~~~~~~~~P~~~~~~--~~~~GSGfvI~~g~ILT~aHvV~~~--~~i~V~~~~~--------g~~~~a~vv~~d------ 193 (526)
......++||+.... ....|+|.+|++.+|||+|||+.+. ..+.|.+... ...+..+-+..+
T Consensus 5 ~~a~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~h~y~~~~ 84 (218)
T 2z7f_E 5 RRARPHAWPFMVSLQLRGGHFCGATLIAPNFVMSAAHCVANVNVRAVRVVLGAHNLSRREPTRQVFAVQRIFENGYDPVN 84 (218)
T ss_dssp EECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECHHHHTTSCGGGCEEEESCSBTTSCCTTCEEEEEEEEEESCCBTTT
T ss_pred EECCCCccCcEEEEEeCCCcEEEEEEccCCEEEEcHHhcCCCCcCcEEEEEeceecCCCCCceEEEEEEEEEccCCCCCC
Confidence 344455677766432 2357999999999999999999764 3477776421 133444444433
Q ss_pred cCCCeEEEEecccc-cccCceeeecCCCC---cCCCcEEEEeeCCCCCc-------eeEEEEEEeceeeeeccCCceeee
Q 009784 194 TECDIAMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGDT-------ISVTSGVVSRIEILSYVHGSTELL 262 (526)
Q Consensus 194 ~~~DlAlLkv~~~~-~~~~~~pl~l~~~~---~~g~~V~~iG~p~~~~~-------~sv~~GiVs~~~~~~~~~~~~~~~ 262 (526)
..+||||||++.+. +.+.+.|+.|.... ..+..+++.||...... ..+..-++ ...+.. .
T Consensus 85 ~~~DIALl~L~~~~~~~~~v~picL~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~-~~~C~~--------~ 155 (218)
T 2z7f_E 85 LLNDIVILQLNGSATINANVQVAQLPAQGRRLGNGVQCLAMGWGLLGRNRGIASVLQELNVTVV-TSLCRR--------S 155 (218)
T ss_dssp TBSCCEEEEESSCCCCSSSCCCCCCCCTTCCCCTTCEEEEEESSBCSSSCCBCSBCEEEEEEEE-CTTCCT--------T
T ss_pred CCCCEEEEEECCcCcCCCceeccCcCCCCCCCCCCCEEEEEEeCCCCCCCCccchheEeeeEEe-hhHcCc--------c
Confidence 34799999998763 34467888887532 35788999998654221 11222222 111110 1
Q ss_pred EEEE-----cccCCCCCCCCeeecCCCeEEEEEeeccc-cCccccccccccHHHHHHHHHH
Q 009784 263 GLQI-----DAAINSGNSGGPAFNDKGKCVGIAFQSLK-HEDVENIGYVIPTPVIMHFIQD 317 (526)
Q Consensus 263 ~i~~-----da~i~~G~SGGPlvn~~G~VVGI~~~~~~-~~~~~~~~~aIP~~~i~~~l~~ 317 (526)
.++. ....|.|+|||||+. +|.++||++.... -.....-+....+....+++++
T Consensus 156 ~~Ca~~~~~~~~~C~GDSGgPl~~-~~~l~Gi~S~~~g~C~~~~~p~vyt~V~~~~~WI~~ 215 (218)
T 2z7f_E 156 NVCTLVRGRQAGVCFGDSGSPLVC-NGLIHGIASFVRGGCASGLYPDAFAPVAQFVNWIDS 215 (218)
T ss_dssp SEEEECTTSCCBCCTTCTTCEEEE-TTEEEEEEEEESSSTTCSSSCEEEEEGGGGHHHHHH
T ss_pred eeeeccCCCCCeeCCCcCCCceEE-ccEEEEEEEeCCccCCCCCCCeEEEEHHHhHHHHHH
Confidence 2443 246789999999997 6899999987321 1111112334444445555544
No 67
>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET: NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB: 2aip_A*
Probab=99.37 E-value=8.1e-12 Score=121.07 Aligned_cols=184 Identities=14% Similarity=0.098 Sum_probs=110.8
Q ss_pred eCCCCCCccccCCC-cceEEEEEEEeCCEEEecccccCCCCeEEEEEcC-C--------CcEEEEEEEEecc-------C
Q 009784 133 TEPNFSLPWQRKRQ-YSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRG-S--------DTKYLATVLAIGT-------E 195 (526)
Q Consensus 133 ~~~~~~~P~~~~~~-~~~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~-~--------g~~~~a~vv~~d~-------~ 195 (526)
.....++||+.... ....|+|.+|++.||||+|||+.+. +.|.+.. + .+.+..+-+..++ .
T Consensus 6 ~a~~~~~Pw~v~l~~~~~~CgGsLIs~~~VLTAAHC~~~~--~~v~~G~~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~ 83 (231)
T 2aiq_A 6 ECNINEHRFLALVYANGSLCGGTLINQEWVLTARHCDRGN--MRIYLGMHNLKVLNKDALRRFPKEKYFCLNTRNDTIWD 83 (231)
T ss_dssp ECCTTSCTTEEEEEETTEEEEEEECSSSEEEECGGGCCSS--CEEEESCSCTTSCCTTCEEECEEEEECCSSCCSSSTTT
T ss_pred ECCCCCCCeEEEEEcCCCeEEEEEEeCCEEEEcHHcCCCC--CEEEEecccccccCCCceEEEEEEEEEECCCCCCCCCC
Confidence 34455667765432 2257999999999999999999864 4444421 1 1223344444443 4
Q ss_pred CCeEEEEecccc-cccCceeeecCCC-CcCCCcEEEEeeCCCCC--------ceeEEEEEEeceeeeeccCCceeeeEEE
Q 009784 196 CDIAMLTVEDDE-FWEGVLPVEFGEL-PALQDAVTVVGYPIGGD--------TISVTSGVVSRIEILSYVHGSTELLGLQ 265 (526)
Q Consensus 196 ~DlAlLkv~~~~-~~~~~~pl~l~~~-~~~g~~V~~iG~p~~~~--------~~sv~~GiVs~~~~~~~~~~~~~~~~i~ 265 (526)
+||||||++.+. +...+.|+.|... ...++.+++.||..... ...+..-+++...+.....+ ....+++
T Consensus 84 ~DIALl~L~~~v~~~~~v~picL~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~-~~~~~~C 162 (231)
T 2aiq_A 84 KDIMLIRLNRPVRNSAHIAPLSLPSNPPSVGSVCRIMGWGTITSPNATLPDVPHCANINILDYAVCQAAYKG-LAATTLC 162 (231)
T ss_dssp TCCEEEEESSCCCCBTTBCCCCCCSSCCCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECHHHHHHHCTT-CCSSEEE
T ss_pred CCEEEEEecCCCCCCCcEEeeECCCCCCCCCCEEEEEeCCccCCCCCccCchhhhccceecchhhhhhhhcC-CCcCcEE
Confidence 699999998763 3446788888753 35688999999875321 11233344444333221111 1122455
Q ss_pred Ec-----ccCCCCCCCCeeecCCCeEEEEEeeccc-cCccccccccccHHHHHHHHHHHHH
Q 009784 266 ID-----AAINSGNSGGPAFNDKGKCVGIAFQSLK-HEDVENIGYVIPTPVIMHFIQDYEK 320 (526)
Q Consensus 266 ~d-----a~i~~G~SGGPlvn~~G~VVGI~~~~~~-~~~~~~~~~aIP~~~i~~~l~~l~~ 320 (526)
.. ...+.|+|||||+. +|+++||++.+.. -.....-+....+....+++++..+
T Consensus 163 a~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 222 (231)
T 2aiq_A 163 AGILEGGKDTCKGDSGGPLIC-NGQFQGILSVGGNPCAQPRKPGIYTKVFDYTDWIQSIIS 222 (231)
T ss_dssp EECTTCSCBCCTTCTTCEEEE-TTEEEEEEEEECSSTTCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred eccCCCCCcccCCcCCCcEEE-CCEEEEEEEEeCCCCCCCCCCEEEEEHHHHHHHHHHHHc
Confidence 43 36789999999998 5899999987621 1111223444555556666666554
No 68
>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} SCOP: b.47.1.0 PDB: 4djz_B
Probab=99.37 E-value=1.2e-11 Score=120.62 Aligned_cols=186 Identities=16% Similarity=0.150 Sum_probs=113.9
Q ss_pred eCCCCCCccccCC---CcceEEEEEEEeCCEEEecccccCC----------------CCeEEEEEcC--------CCcEE
Q 009784 133 TEPNFSLPWQRKR---QYSSSSSGFAIGGRRVLTNAHSVEH----------------YTQVKLKKRG--------SDTKY 185 (526)
Q Consensus 133 ~~~~~~~P~~~~~---~~~~~GSGfvI~~g~ILT~aHvV~~----------------~~~i~V~~~~--------~g~~~ 185 (526)
.....++||.... .....|+|.+|++.+|||+|||+.+ ...+.|.+.. .++.+
T Consensus 6 ~a~~~~~Pw~v~l~~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~ 85 (251)
T 3gov_B 6 PAQKGTTPWIAMLSHLNGQPFCGGSLLGSSWIVTAAHCLHQSLDPKDPTLRDSDLLSPSDFKIILGKHWRLRSDENEQHL 85 (251)
T ss_dssp ECCTTSCTTEEEEEETTCCEEEEEEEETTTEEEECGGGGBCCCCTTSCCCCGGGBCCGGGEEEEESCCBSSSCCSSCEEE
T ss_pred ECCCCCcCeEEEEeccCCCeeEEEEEecCCEEEECHhhccccccccccccccccccccccEEEEecceeccCCCCcceEe
Confidence 3444566776543 2345799999999999999999964 2457777642 12344
Q ss_pred EEEEEEeccC-------CCeEEEEecccc-cccCceeeecCCCC-cCCCcEEEEeeCCCCC------ceeEEEEEEecee
Q 009784 186 LATVLAIGTE-------CDIAMLTVEDDE-FWEGVLPVEFGELP-ALQDAVTVVGYPIGGD------TISVTSGVVSRIE 250 (526)
Q Consensus 186 ~a~vv~~d~~-------~DlAlLkv~~~~-~~~~~~pl~l~~~~-~~g~~V~~iG~p~~~~------~~sv~~GiVs~~~ 250 (526)
..+-+..++. +|||||+++.+. +...+.|+.|.... ..++.+++.||..... ...+...+++...
T Consensus 86 ~v~~i~~hp~y~~~~~~~DIAll~L~~~~~~~~~v~picLp~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~ 165 (251)
T 3gov_B 86 GVKHTTLHPQYDPNTFENDVALVELLESPVLNAFVMPICLPEGPQQEGAMVIVSGWGKQFLQRFPETLMEIEIPIVDHST 165 (251)
T ss_dssp CEEEEEECTTCBTTTTBTCCEEEEESSCCCCSSSCCCCBCCSSCCCTTCEEEEEECSCCTTSCCCSBCEEEEEEEECHHH
T ss_pred eeEEEEECCCCCCCCCCCCEEEEEeCCcccCCCceEEeECCCCCCCCCCEEEEEcCCCCCCCCCCccceEEeeEEECHHH
Confidence 4555556654 699999998763 34567888887543 5678899999865321 1233444444433
Q ss_pred eeeccC---CceeeeEEEEc-----ccCCCCCCCCeeecC---CC--eEEEEEeeccccCccccccccccHHHHHHHHHH
Q 009784 251 ILSYVH---GSTELLGLQID-----AAINSGNSGGPAFND---KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQD 317 (526)
Q Consensus 251 ~~~~~~---~~~~~~~i~~d-----a~i~~G~SGGPlvn~---~G--~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~ 317 (526)
+..... ......+++.. ...|.|+|||||+.. +| .++||++.+..-......+....+...++++++
T Consensus 166 C~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~ 245 (251)
T 3gov_B 166 CQKAYAPLKKKVTRDMICAGEKEGGKDACAGDSGGPMVTLNRERGQWYLVGTVSWGDDCGKKDRYGVYSYIHHNKDWIQR 245 (251)
T ss_dssp HHHHTTTTTCCCCTTEEEESCTTCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSCSSCCEEEEETTTTHHHHHH
T ss_pred hhhhhhhccCCCCCCcEEecCCCCCCccCCCCCCCeEEeeeCCCCcEEEEEEEEECCCCCCCCCCEEEEEHHHhHHHHHH
Confidence 322111 11122346653 367899999999863 34 699999876432222223444555555666655
Q ss_pred H
Q 009784 318 Y 318 (526)
Q Consensus 318 l 318 (526)
.
T Consensus 246 ~ 246 (251)
T 3gov_B 246 V 246 (251)
T ss_dssp H
T ss_pred H
Confidence 4
No 69
>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine esterase, glycosylation, extracellular; HET: NAG; 1.75A {Agkistrodon halys}
Probab=99.36 E-value=1.1e-11 Score=120.05 Aligned_cols=187 Identities=14% Similarity=0.097 Sum_probs=111.1
Q ss_pred eCCCCCCccccCCC----cceEEEEEEEeCCEEEecccccCCCCeEEEEEcC-----CCc--EEEEEEEEecc-------
Q 009784 133 TEPNFSLPWQRKRQ----YSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRG-----SDT--KYLATVLAIGT------- 194 (526)
Q Consensus 133 ~~~~~~~P~~~~~~----~~~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~-----~g~--~~~a~vv~~d~------- 194 (526)
.....++||..... ....|+|.+|++.||||+|||+.....+.+-... ... .+..+.+..++
T Consensus 6 ~a~~~~~Pw~v~l~~~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~ 85 (238)
T 4e7n_A 6 ECNINEHRFLVALYTSRSRTLFCGGTLINQEWVLTAAHCDRKNFRIKLGMHSKKVPNEDEQTRVPKEKFFCLSSKNYTLW 85 (238)
T ss_dssp ECCTTSCTTEEEEECTTTCCEEEEEEECSSSEEEECGGGCCSSCEEEESCSCSSSCCTTCEEECEEEEECSSTTCCCCSS
T ss_pred eCCCCCcCcEEEEEECCCCCEEEEEEEecCCEEEEhHHcCCCCCeEEeceeeccccCCCceeEeeeeeEEcCCCCCCCCC
Confidence 34445667765321 3458999999999999999999754444333221 011 12223333233
Q ss_pred CCCeEEEEecccc-cccCceeeecCCC-CcCCCcEEEEeeCCCCC--------ceeEEEEEEeceeeeeccC---Cceee
Q 009784 195 ECDIAMLTVEDDE-FWEGVLPVEFGEL-PALQDAVTVVGYPIGGD--------TISVTSGVVSRIEILSYVH---GSTEL 261 (526)
Q Consensus 195 ~~DlAlLkv~~~~-~~~~~~pl~l~~~-~~~g~~V~~iG~p~~~~--------~~sv~~GiVs~~~~~~~~~---~~~~~ 261 (526)
.+||||||++.+. +...+.|+.|... ...++.+++.||..... ...+...+++...+..... .....
T Consensus 86 ~~DIALl~L~~~v~~~~~v~pi~l~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~ 165 (238)
T 4e7n_A 86 DKDIMLIRLDSPVKNSKHIAPFSLPSSPPSVGSVCRIMGWGRISPTEGTYPDVPHCVNINLLEYEMCRAPYPEFELPATS 165 (238)
T ss_dssp SCCCEEEEESSCCCCBTTBCCCCCCSSCCCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECGGGGTTTCGGGCCCSCC
T ss_pred CCcEEEEEeCCCccCCCceeeeeCCCCCCCCCCEEEEEECCCCCCCCCCCCccceEeeccccCHHHHhhhcccccCCCCC
Confidence 4699999998763 3456788888754 35689999999875321 1224444555444322111 11112
Q ss_pred eEEEEc-----ccCCCCCCCCeeecCCCeEEEEEeecccc-CccccccccccHHHHHHHHHHHHH
Q 009784 262 LGLQID-----AAINSGNSGGPAFNDKGKCVGIAFQSLKH-EDVENIGYVIPTPVIMHFIQDYEK 320 (526)
Q Consensus 262 ~~i~~d-----a~i~~G~SGGPlvn~~G~VVGI~~~~~~~-~~~~~~~~aIP~~~i~~~l~~l~~ 320 (526)
.+++.. ...|.|+|||||+. +++++||++.+... .....-+....+...++++++..+
T Consensus 166 ~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~ 229 (238)
T 4e7n_A 166 RTLCAGILEGGKDTCKGDSGGPLIC-NGQFQGIASWGDDPCAQPHKPAAYTKVFDHLDWIENIIA 229 (238)
T ss_dssp SEEEEECTTCSCBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEESGGGHHHHHHHHT
T ss_pred CeEEeCCCCCCCccCCCCCCcceEE-CCEEEEEEEEeCCCCCCCCCCeEEEEhHHHHHHHHHHHh
Confidence 245552 36789999999997 68999999876531 111223444555556666666554
No 70
>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes scabiei type hominis}
Probab=99.36 E-value=7.2e-12 Score=120.96 Aligned_cols=186 Identities=18% Similarity=0.147 Sum_probs=114.8
Q ss_pred eCCCCCCccccCCC--cceEEEEEEEeCCEEEecccccCC--CCeEEEEEcC-----CCcEEEEEEEEec------cCCC
Q 009784 133 TEPNFSLPWQRKRQ--YSSSSSGFAIGGRRVLTNAHSVEH--YTQVKLKKRG-----SDTKYLATVLAIG------TECD 197 (526)
Q Consensus 133 ~~~~~~~P~~~~~~--~~~~GSGfvI~~g~ILT~aHvV~~--~~~i~V~~~~-----~g~~~~a~vv~~d------~~~D 197 (526)
.....++||..... ....|+|.+|++.+|||+|||+.+ ...+.|.+.. .+..+..+-+..+ ..+|
T Consensus 6 ~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~h~y~~~~~~~D 85 (235)
T 3h7t_A 6 KSDITKEPWAVGVLVDEKPFCGGSILTANFVITAAQCVDGTKPSDISIHYGSSYRTTKGTSVMAKKIYIVRYHPLTMQNN 85 (235)
T ss_dssp ECCTTTSTTEEEEEETTSCCEEEEESSSSEEEECHHHHTTCCGGGEEEEESCSBSSSSSEEEEEEEEEECSCBTTTTBTC
T ss_pred ECCCCCCCcEEEEecCCCceEeEEEeeCCEEEECHHHCCCCCCCeeEEEcCccccccCCceeeeeeEEeeecCCCCCCCC
Confidence 34455667766432 235799999999999999999964 3467777642 1233444434332 2479
Q ss_pred eEEEEecccc-ccc-CceeeecCCC---CcCCCcEEEEeeCCCCC--------ceeEEEEEEeceeeeeccCCc-----e
Q 009784 198 IAMLTVEDDE-FWE-GVLPVEFGEL---PALQDAVTVVGYPIGGD--------TISVTSGVVSRIEILSYVHGS-----T 259 (526)
Q Consensus 198 lAlLkv~~~~-~~~-~~~pl~l~~~---~~~g~~V~~iG~p~~~~--------~~sv~~GiVs~~~~~~~~~~~-----~ 259 (526)
||||+++.+. +.. .+.|+.|... ...++.+++.||..... ...+...+++...+....... .
T Consensus 86 iAll~L~~~v~~~~~~v~pi~Lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~ 165 (235)
T 3h7t_A 86 YAVIETEMPIKLDDKTTKKIELPSLLYDPEPDTSVLVSGWGSTNFKSLEYSGDLMEANFTVVDRKSCEEQYKQIEADKYI 165 (235)
T ss_dssp CEEEEESSCCCCCSSSCCCCBCCCTTCCCCTTCEEEEEECCCSSTTCCCCCSBCEEEEEEEECHHHHHHHHHTTTCGGGC
T ss_pred eEEEEeccccccCCccccceecCccccCCCCCCeEEEEecCCCCCCCCchhHHHhhCCCceeCHHHHHHHhhhcccCccc
Confidence 9999999764 334 5778888753 35678999999864321 123344445443332211110 1
Q ss_pred eeeEEEE-----cccCCCCCCCCeeecCCCeEEEEEeeccccCccccccccccHHHHHHHHHHHHH
Q 009784 260 ELLGLQI-----DAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEK 320 (526)
Q Consensus 260 ~~~~i~~-----da~i~~G~SGGPlvn~~G~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 320 (526)
...+++. ....+.|+|||||+. +|+++||++.+..-.. ..-+....+....+++++..+
T Consensus 166 ~~~~~Ca~~~~~~~~~C~GDsGgPl~~-~~~l~Gi~S~g~~C~~-~~p~vyt~v~~~~~WI~~~i~ 229 (235)
T 3h7t_A 166 YDGVFCAGGEYDETYIGYGDAGDPAVQ-NGTLVGVASYISSMPS-EFPSVFLRVGYYVLDIKDIIS 229 (235)
T ss_dssp STTEEEECBTTTTBBCCTTCTTCEEEE-TTEEEEEECCCTTCCT-TSCEEEEEGGGGHHHHHHHHT
T ss_pred cCCeEecCCCCCCCccccCCCCCceee-CCeEEEEEEecCCCCC-CCCceEEEHHHHHHHHHHHHh
Confidence 1224555 346789999999998 7899999987653211 233445555566677766654
No 71
>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen; HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A 3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A
Probab=99.36 E-value=2.3e-11 Score=116.89 Aligned_cols=184 Identities=17% Similarity=0.120 Sum_probs=111.9
Q ss_pred eeeCCCCCCccccCCCcceEEEEEEEeCCEEEecccccCCC---CeEEEEEcC------CCcEEEEEEEEeccC------
Q 009784 131 VHTEPNFSLPWQRKRQYSSSSSGFAIGGRRVLTNAHSVEHY---TQVKLKKRG------SDTKYLATVLAIGTE------ 195 (526)
Q Consensus 131 ~~~~~~~~~P~~~~~~~~~~GSGfvI~~g~ILT~aHvV~~~---~~i~V~~~~------~g~~~~a~vv~~d~~------ 195 (526)
.......++||+.... ..|+|.+|++.+|||+|||+.+. ..+.|.+.. +...+..+-+..++.
T Consensus 4 G~~a~~~~~Pw~v~l~--~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~v~~i~~hp~y~~~~~ 81 (224)
T 3beu_A 4 GTRAAQGEFPFMVRLS--MGCGGALYAQDIVLTAAHCVSGSGNNTSITATGGVVDLQSSSAVKVRSTKVLQAPGFTKETY 81 (224)
T ss_dssp CEECCTTTSTTEEEET--TTEEEEEEETTEEEECGGGSCSSEEBCCCEEEESCSBTTCTTCEEEEEEEEEECTTCCCGGG
T ss_pred CeECCCCCCCEEEEEC--CceeEEEeeCCEEEEChhhcCCCCCcceEEEEeeEeecCCCCceEEEEEEEEeCCCcCCCcC
Confidence 3445566789987543 46999999999999999999864 346666631 123455544555554
Q ss_pred -CCeEEEEecccccccCceeeecCCCC-cCCCcEEEEeeCCCCC-------ceeEEEEEEeceeeeeccC-CceeeeEEE
Q 009784 196 -CDIAMLTVEDDEFWEGVLPVEFGELP-ALQDAVTVVGYPIGGD-------TISVTSGVVSRIEILSYVH-GSTELLGLQ 265 (526)
Q Consensus 196 -~DlAlLkv~~~~~~~~~~pl~l~~~~-~~g~~V~~iG~p~~~~-------~~sv~~GiVs~~~~~~~~~-~~~~~~~i~ 265 (526)
+||||||++.+. .++++.+.... ..+..+++.||..... ...+..-+++...+..... ......+++
T Consensus 82 ~~DIALl~L~~~v---~~~~i~l~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~C 158 (224)
T 3beu_A 82 GKDWALIKLAQPI---NQPTLKIATTTAYNQGTFTVAGWGANREGGSQQRYLLKANVPFVSDAACRSSSSFILVANEMIC 158 (224)
T ss_dssp SCCCEEEEESSCC---CSCCCEECCSSTTSSSEEEEEESSCSSTTCCCCSBCEEEEEEEECHHHHHHHCSSCCCGGGEEE
T ss_pred CCCEEEEEeCCCC---CCCccccccccccCCCEEEEEecCccCCCCcccceeeEeeCcccCHHHhhhhcCCccCCCCeEE
Confidence 599999999874 35666665433 2356889999865321 1123334444333322111 111122455
Q ss_pred Ec-----ccCCCCCCCCeeecCC--C--eEEEEEeeccccCccccccccccHHHHHHHHHHHH
Q 009784 266 ID-----AAINSGNSGGPAFNDK--G--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYE 319 (526)
Q Consensus 266 ~d-----a~i~~G~SGGPlvn~~--G--~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l~ 319 (526)
.. ...|.|+|||||+..+ | .++||++.+..-......+....+....+++++..
T Consensus 159 a~~~~~~~~~C~GDsGgPl~~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~ 221 (224)
T 3beu_A 159 AGYDTKQEDTCQGDSGGPMFRKDNADEWVQVGIVSWGEGCARKGKYGVYTEVSTFASAIASAA 221 (224)
T ss_dssp ECCSSSSCBCCTTCTTCEEEEECTTSCEEEEEEEEEESSSSCTTCCEEEEEHHHHHHHHHHHH
T ss_pred eccCCCCCcCCCCcCCCeeEEecCCCCEEEEEEeccCCCCCCCCCCeEEEEHHHHHHHHHHHH
Confidence 53 3678999999998643 3 68999987653221223344555666666666543
No 72
>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic resolution, hydrolase/hydrolase inhibitor complex; 1.20A {Pontastacus leptodactylus} SCOP: b.47.1.2
Probab=99.36 E-value=1.8e-11 Score=119.00 Aligned_cols=163 Identities=17% Similarity=0.160 Sum_probs=102.5
Q ss_pred eeCCCCCCccccCCCc----c--eEEEEEEEeCCEEEecccccCCC-----CeEEEEEcC------CC--cEEEEEEEEe
Q 009784 132 HTEPNFSLPWQRKRQY----S--SSSSGFAIGGRRVLTNAHSVEHY-----TQVKLKKRG------SD--TKYLATVLAI 192 (526)
Q Consensus 132 ~~~~~~~~P~~~~~~~----~--~~GSGfvI~~g~ILT~aHvV~~~-----~~i~V~~~~------~g--~~~~a~vv~~ 192 (526)
......++||+..... . ..|+|.+|++.+|||+|||+.+. ..+.|.+.. ++ +.+..+-+..
T Consensus 5 ~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~ 84 (237)
T 2f91_A 5 TDATLGEFPYQLSFQETFIGFSFHFCGASIYNENYAITAGHCVYGDDYENPSGLQIVAGELDMSVNEGSEQIITVSKIIL 84 (237)
T ss_dssp EECCTTTSTTEEEEEEEETTEEEEEEEEEEEETTEEEECGGGTTTSCTTSCCSEEEEESCSBTTSCCSCCEEEEEEEEEE
T ss_pred cCCCCCCCCcEEEEEEecCCCCcceEEEEEeeCCEEEEcHHhCCCCccCCcccEEEEECCeeccCCCCccEEEEEEEEEE
Confidence 3344556677654321 1 34999999999999999999753 457777632 11 3455555555
Q ss_pred cc-------CCCeEEEEecccc-cccCceeeecCCCC-cCCCcEEEEeeCCCCC-------ceeEEEEEEeceeeee-cc
Q 009784 193 GT-------ECDIAMLTVEDDE-FWEGVLPVEFGELP-ALQDAVTVVGYPIGGD-------TISVTSGVVSRIEILS-YV 255 (526)
Q Consensus 193 d~-------~~DlAlLkv~~~~-~~~~~~pl~l~~~~-~~g~~V~~iG~p~~~~-------~~sv~~GiVs~~~~~~-~~ 255 (526)
++ .+||||||++.+. +.+.+.|+.|.... ..++.+++.||..... ...+..-+++...+.. +.
T Consensus 85 Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~ 164 (237)
T 2f91_A 85 HENFDYNLLDNDISLLKLSGSLTFNDNVAPIALPEQGHTATGDVIVTGWGTTSEGGNTPDVLQKVTVPLVSDEDCRADYG 164 (237)
T ss_dssp CTTCCTTTCTTCCEEEEESSCCCCBTTBCCCBCCCTTCCCCSEEEEEESCCSSTTCCCCSBCEEEEEEEECHHHHHHHHC
T ss_pred CCCCCCCCCCCcEEEEEECCCcccCCceeeccCCCCCCCCCCcEEEEECCcCCCCCCccceeeEEEEeEcCHHHhhhhhC
Confidence 54 3699999999763 34568888887543 4678899999864321 1123334444433322 11
Q ss_pred CCceeeeEEEEc-----ccCCCCCCCCeeecCCC---eEEEEEeecc
Q 009784 256 HGSTELLGLQID-----AAINSGNSGGPAFNDKG---KCVGIAFQSL 294 (526)
Q Consensus 256 ~~~~~~~~i~~d-----a~i~~G~SGGPlvn~~G---~VVGI~~~~~ 294 (526)
.......+++.. ...|.|+|||||+..++ .++||++.+.
T Consensus 165 ~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~~l~Gi~S~g~ 211 (237)
T 2f91_A 165 ADEILDSMICAGVPEGGKDSCQGDSGGPLAASDTGSTYLAGIVSWGY 211 (237)
T ss_dssp TTTSCTTEEEECCTTCCCBCCTTCTTCEEEECTTSSCEEEEEEEEES
T ss_pred CCCcCCCeEEEecCCCCCCCCCCcCCCCeEEecCCCEEEEEEEEecC
Confidence 111112346653 35789999999997532 7999998764
No 73
>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS; 1.70A {Solenopsis invicta} SCOP: b.47.1.2
Probab=99.36 E-value=1.1e-11 Score=119.46 Aligned_cols=183 Identities=16% Similarity=0.157 Sum_probs=112.8
Q ss_pred eeCCCCCCccccCCC--cceEEEEEEEeCCEEEecccccCCC---CeEEEEEcC-----CCcEEEEEEEEecc-------
Q 009784 132 HTEPNFSLPWQRKRQ--YSSSSSGFAIGGRRVLTNAHSVEHY---TQVKLKKRG-----SDTKYLATVLAIGT------- 194 (526)
Q Consensus 132 ~~~~~~~~P~~~~~~--~~~~GSGfvI~~g~ILT~aHvV~~~---~~i~V~~~~-----~g~~~~a~vv~~d~------- 194 (526)
......++||+.... ....|+|.+|++.||||+|||+.+. ..+.|.+.. +++.+..+-+..++
T Consensus 5 ~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~v~~~~~hp~y~~~~~ 84 (222)
T 1eq9_A 5 KDAPVGKYPYQVSLRLSGSHRCGASILDNNNVLTAAHCVDGLSNLNRLKVHVGTNYLSESGDVYDVEDAVVNKNYDDFLL 84 (222)
T ss_dssp EECCTTSCTTEEEEEETTEEEEEEEECSSSEEEECHHHHTTCSCGGGEEEEESCSBTTSCCEEEEEEEEEECTTCBTTTT
T ss_pred EECCCCCcceEEEEEeCCCeEEEEEEeeCCEEEEhhhcCCCCCCCceEEEEECceecCCCCeEEEEEEEEECCCCCCCCC
Confidence 344556677766432 2367999999999999999999763 457777642 23455555555554
Q ss_pred CCCeEEEEecccc-cccCceeeecCCCC--cCCCcEEEEeeCCCCC-------ceeEEEEEEeceeeeeccCCceeeeEE
Q 009784 195 ECDIAMLTVEDDE-FWEGVLPVEFGELP--ALQDAVTVVGYPIGGD-------TISVTSGVVSRIEILSYVHGSTELLGL 264 (526)
Q Consensus 195 ~~DlAlLkv~~~~-~~~~~~pl~l~~~~--~~g~~V~~iG~p~~~~-------~~sv~~GiVs~~~~~~~~~~~~~~~~i 264 (526)
.+||||||++.+. +.+.+.|+.|.... ..++.+++.||..... ...+..-+++...+.....+ ....++
T Consensus 85 ~~DIALl~L~~~v~~~~~v~picL~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~-~~~~~~ 163 (222)
T 1eq9_A 85 RNDVALVHLTNPIKFNDLVQPIKLSTNDEDLESNPCTLTGWGSTRLGGNTPNALQEIELIVHPQKQCERDQWR-VIDSHI 163 (222)
T ss_dssp BCCCEEEEESSCCCCBTTBCCCEECSCCTTCTTSEEEEEECCCSSTTCCCCSBCEEEEEEEECHHHHHHHSSS-CCTTEE
T ss_pred CCCEEEEEECCccccCCceEccCCCCCCcCCCCCEEEEEcccccCCCCcccchheEeEEEEeCHHHhCcccCC-CCccEE
Confidence 4799999998763 44568888887543 3578899999865321 11233334443333211111 111245
Q ss_pred EEc----ccCCCCCCCCeeecCCCeEEEEEeeccccCccccccccccHHHHHHHHHH
Q 009784 265 QID----AAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQD 317 (526)
Q Consensus 265 ~~d----a~i~~G~SGGPlvn~~G~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~ 317 (526)
+.. ...|.|+|||||+. +|.++||++.+..-.. ..-+....+....+++++
T Consensus 164 Ca~~~~~~~~C~GDSGgPL~~-~~~l~GI~S~g~~C~~-~~p~vyt~V~~~~~WI~~ 218 (222)
T 1eq9_A 164 CTLTKRGEGACHGDSGGPLVA-NGAQIGIVSFGSPCAL-GEPDVYTRVSSFVSWINA 218 (222)
T ss_dssp EECCCTTCBCCTTCTTCEEEE-TTEEEEEEEECSTTTS-SSCEEEEEGGGGHHHHHH
T ss_pred eecCCCCCeeeeCCccceEEE-CCEEEEEEEECCCcCC-CCCCEEEEHHHHHHHHHH
Confidence 543 35789999999997 6899999987642211 222333444445555544
No 74
>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A {Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A
Probab=99.35 E-value=1.8e-11 Score=118.73 Aligned_cols=185 Identities=16% Similarity=0.108 Sum_probs=110.5
Q ss_pred eeCCCCCCccccCCC--cceEEEEEEEeCCEEEecccccCCCCeEEEEEcCC--------CcEEEEEEEEecc-------
Q 009784 132 HTEPNFSLPWQRKRQ--YSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGS--------DTKYLATVLAIGT------- 194 (526)
Q Consensus 132 ~~~~~~~~P~~~~~~--~~~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~~--------g~~~~a~vv~~d~------- 194 (526)
......++||+.... ....|+|.+|++.||||+|||+.+ ..+.|.+... .+.+..+-+..++
T Consensus 5 ~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~-~~~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~ 83 (234)
T 1orf_A 5 NEVTPHSRPYMVLLSLDRKTICAGALIAKDWVLTAAHCNLN-KRSQVILGAHSITREEPTKQIMLVKKEFPYPCYDPATR 83 (234)
T ss_dssp EECCTTSSTTEEEEECSSSCEEEEEEEETTEEEECTTCCCC-TTCEEEESCSBSSSCCTTCEEECEEEEEECTTCCTTTC
T ss_pred EECCCCCCCeEEEEccCCceEEEEEEeeCCEEEEchhcCCC-CCceEEEeccccCcCCCceEEEEEEEEEcCCCCCCCCC
Confidence 334455677766432 246899999999999999999975 3456665311 2344455555554
Q ss_pred CCCeEEEEecccc-cccCceeeecCCCC---cCCCcEEEEeeCCCCC-------ceeEEEEEEeceeeee-ccCCcee--
Q 009784 195 ECDIAMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGD-------TISVTSGVVSRIEILS-YVHGSTE-- 260 (526)
Q Consensus 195 ~~DlAlLkv~~~~-~~~~~~pl~l~~~~---~~g~~V~~iG~p~~~~-------~~sv~~GiVs~~~~~~-~~~~~~~-- 260 (526)
.+||||||++.+. +.+.+.|+.|.... ..++.+++.||..... ...+..-+++...+.. .......
T Consensus 84 ~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~ 163 (234)
T 1orf_A 84 EGDLKLLQLTEKAKINKYVTILHLPKKGDDVKPGTMCQVAGWGRTHNSASWSDTLREVEITIIDRKVCNDRNHYNFNPVI 163 (234)
T ss_dssp TTCCEEEEESSCCCCSSSSCCCCCCSSCCCCCTTCEEEEEESSCSSSSSCCCSBCEEEEEEEECHHHHTSTTTTTTTTCC
T ss_pred CCCEEEEEECCcCccCCCeeeeecCCCcCCCCCCCEEEEEECCcCCCCCCccccceEeEEEeeCHHHcCCccccccCCcc
Confidence 4699999998763 34467888887533 4578899999864321 1123344444433321 0001000
Q ss_pred -eeEEEEc-----ccCCCCCCCCeeecCCCeEEEEEeecc--ccCccccccccccHH-HHHHHHHHH
Q 009784 261 -LLGLQID-----AAINSGNSGGPAFNDKGKCVGIAFQSL--KHEDVENIGYVIPTP-VIMHFIQDY 318 (526)
Q Consensus 261 -~~~i~~d-----a~i~~G~SGGPlvn~~G~VVGI~~~~~--~~~~~~~~~~aIP~~-~i~~~l~~l 318 (526)
..+++.. ...|.|+|||||+. +|.++||++.+. .-.....-+...-+. ...+++++.
T Consensus 164 ~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~GI~S~g~~~~C~~~~~p~vyt~v~~~~~~WI~~~ 229 (234)
T 1orf_A 164 GMNMVCAGSLRGGRDSCNGDSGSPLLC-EGVFRGVTSFGLENKCGDPRGPGVYILLSKKHLNWIIMT 229 (234)
T ss_dssp CTTEEEEECSSCCCBCCTTCTTCEEEE-TTEEEEEEEECCTTCTTCTTSCEEEEECCHHHHHHHHHH
T ss_pred CCCEEEecCCCCCCcCCCCCCCCeEEE-CCEEEEEEEEcCCCCCCCCCCCCEEEEchHHHHHHHHHH
Confidence 1245543 35789999999997 689999998764 111112223334444 455555554
No 75
>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor complex, serine proteinase, benzamidine phosphonate, serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens} SCOP: b.47.1.2 PDB: 3bn9_B* 3nps_A 3so3_A* 1eax_A 1eaw_A 2gv6_A* 2gv7_A* 3p8g_A* 3p8f_A*
Probab=99.35 E-value=1.6e-11 Score=119.26 Aligned_cols=186 Identities=16% Similarity=0.155 Sum_probs=111.0
Q ss_pred eeCCCCCCccccCCC---cceEEEEEEEeCCEEEecccccCCC--------CeEEEEEcC---------CCcEEEEEEEE
Q 009784 132 HTEPNFSLPWQRKRQ---YSSSSSGFAIGGRRVLTNAHSVEHY--------TQVKLKKRG---------SDTKYLATVLA 191 (526)
Q Consensus 132 ~~~~~~~~P~~~~~~---~~~~GSGfvI~~g~ILT~aHvV~~~--------~~i~V~~~~---------~g~~~~a~vv~ 191 (526)
......++||+.... ....|+|.+|++.+|||+|||+.+. ..+.|.+.. ..+.+..+-+.
T Consensus 5 ~~a~~~~~Pw~v~l~~~~~~~~CgGtLI~~~~VLTAAhC~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~v~~i~ 84 (241)
T 3ncl_A 5 TDADEGEWPWQVSLHALGQGHICGASLISPNWLVSAAHCYIDDRGFRYSDPTQWTAFLGLHDQSQRSAPGVQERRLKRII 84 (241)
T ss_dssp EECCTTSSTTEEEEEETTTEEEEEEEECSSSEEEECGGGGCCBTTBCTTCGGGEEEEESCSBTTCTTSTTCEEEEEEEEE
T ss_pred eECCCCCCCcEEEEEcCCCceEEEEEEeeCCEEEEcHHhcccCCCccccCCceEEEEEeccccccCCCCCceEEEEEEEE
Confidence 344556677766432 2357999999999999999999643 346666531 12345555566
Q ss_pred ecc-------CCCeEEEEecccc-cccCceeeecCCCC---cCCCcEEEEeeCCCCC-------ceeEEEEEEeceeeee
Q 009784 192 IGT-------ECDIAMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGD-------TISVTSGVVSRIEILS 253 (526)
Q Consensus 192 ~d~-------~~DlAlLkv~~~~-~~~~~~pl~l~~~~---~~g~~V~~iG~p~~~~-------~~sv~~GiVs~~~~~~ 253 (526)
.++ .+||||||++.+. +...+.|+.|.... ..++.+++.||..... ...+...+++...+..
T Consensus 85 ~hp~y~~~~~~~DIALl~L~~~~~~~~~v~piclp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~ 164 (241)
T 3ncl_A 85 SHPFFNDFTFDYDIALLELEKPAEYSSMVRPISLPDASHVFPAGKAIWVTGWGHTQYGGTGALILQKGEIRVINQTTCEN 164 (241)
T ss_dssp ECTTCCTTTCTTCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSSTTSCBCSBCEEEEEEECCHHHHHH
T ss_pred ECCCCCCCCCCCcEEEEEECCCCcccCccCceEcCCcccCCCCCCEEEEEEecccCCCCCcCceeeEEeEEEECHHHhhh
Confidence 665 4699999998763 44567888886432 3578999999864321 1122333333333322
Q ss_pred ccCCceeeeEEEEc-----ccCCCCCCCCeeec--CCCe--EEEEEeeccccCccccccccccHHHHHHHHHH
Q 009784 254 YVHGSTELLGLQID-----AAINSGNSGGPAFN--DKGK--CVGIAFQSLKHEDVENIGYVIPTPVIMHFIQD 317 (526)
Q Consensus 254 ~~~~~~~~~~i~~d-----a~i~~G~SGGPlvn--~~G~--VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~ 317 (526)
.........+++.. ...|.|+|||||+. .+|+ ++||++.+..-.....-+....+...++++++
T Consensus 165 ~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~g~~~l~Gi~S~g~~c~~~~~p~vyt~v~~y~~WI~~ 237 (241)
T 3ncl_A 165 LLPQQITPRMMCVGFLSGGVDSCQGDSGGPLSSVEADGRIFQAGVVSWGDGCAQRNKPGVYTRLPLFRDWIKE 237 (241)
T ss_dssp HSTTTCCTTEEEEECTTCSSBCCTTCTTCEEEEECTTSCEEEEEEEEECSSSSCTTCCEEEEESGGGHHHHHH
T ss_pred hcccCCCCCeEEeCCCCCCCccCCCcCCCCEEEEcCCCcEEEEEEEEECCCCCCCCCCeEEEEHHHHHHHHHH
Confidence 21111222345542 36789999999983 3554 89999876532221223334444445555544
No 76
>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease, catalytic intermediate, atomic resolution, hydrolase-hydrolase inhibitor complex; 0.94A {Sus scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B* 1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A* 1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A* 1esa_A 1esb_A* 1est_A* ...
Probab=99.35 E-value=1.8e-11 Score=119.21 Aligned_cols=161 Identities=17% Similarity=0.111 Sum_probs=101.4
Q ss_pred CCCCCCccccCCC---c---ceEEEEEEEeCCEEEecccccCCCCeEEEEEcCC--------CcEEEEEEEEecc-----
Q 009784 134 EPNFSLPWQRKRQ---Y---SSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGS--------DTKYLATVLAIGT----- 194 (526)
Q Consensus 134 ~~~~~~P~~~~~~---~---~~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~~--------g~~~~a~vv~~d~----- 194 (526)
....++||+.... . ...|+|.+|++.+|||+|||+.+...+.|.+... .+.+..+-+..++
T Consensus 7 a~~~~~Pw~v~l~~~~~~~~~~~CgGsLI~~~~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~ 86 (240)
T 1gvk_B 7 AQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCVDRELTFRVVVGEHNLNQNNGTEQYVGVQKIVVHPYWNTD 86 (240)
T ss_dssp CCTTSCTTEEEEEEEETTEEEEEEEEEEEETTEEEECGGGGCSCCCEEEEESCSBTTSCCSCCEEEEEEEEEECTTCCTT
T ss_pred CCCCCcCEEEEEEecCCCccCceEEEEEeeCCEEEECHHHCCCCcceEEEECCeecccCCCcceEEEEEEEEECCCCCCC
Confidence 3344556655322 1 3579999999999999999998877788887421 2344455455554
Q ss_pred ----CCCeEEEEecccc-cccCceeeecCCCC---cCCCcEEEEeeCCCCCc-------eeEEEEEEeceeeeec-cCC-
Q 009784 195 ----ECDIAMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGDT-------ISVTSGVVSRIEILSY-VHG- 257 (526)
Q Consensus 195 ----~~DlAlLkv~~~~-~~~~~~pl~l~~~~---~~g~~V~~iG~p~~~~~-------~sv~~GiVs~~~~~~~-~~~- 257 (526)
.+||||||++.+. +...+.|+.|.... ..++.+++.||...... ..+..-+++...+... ..+
T Consensus 87 ~~~~~~DIALl~L~~~v~~~~~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~ 166 (240)
T 1gvk_B 87 DVAAGYDIALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQAYLPTVDYAICSSSSYWGS 166 (240)
T ss_dssp CGGGCCCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCCEEEEESCBSSTTCCBCSBCEEEECCEECHHHHTSTTTTGG
T ss_pred CCCCCCcEEEEEECCccccCCCccceecCCCCCCCCCCCEEEEEecCcCCCCCCcchhccEEEEEEEcHHHhccccccCc
Confidence 5699999998763 34457788776532 35788999998653211 1222333433333221 011
Q ss_pred ceeeeEEEEc----ccCCCCCCCCeeecC-CC--eEEEEEeecc
Q 009784 258 STELLGLQID----AAINSGNSGGPAFND-KG--KCVGIAFQSL 294 (526)
Q Consensus 258 ~~~~~~i~~d----a~i~~G~SGGPlvn~-~G--~VVGI~~~~~ 294 (526)
.....+++.. ...|.|+|||||+.. +| .++||++.+.
T Consensus 167 ~~~~~~~Ca~~~~~~~~C~GDSGgPL~~~~~g~~~l~Gi~S~g~ 210 (240)
T 1gvk_B 167 TVKNSMVCAGGDGVRSGCQGDSGGPLHCLVNGQYAVHGVTSFVS 210 (240)
T ss_dssp GCCTTEEEECCSSSCBCCTTCTTCEEEEEETTEEEEEEEEEECB
T ss_pred cCCcceEeecCCCCCcccCCCCcCceEEEECCcEEEEEEEEEeC
Confidence 1112346653 357899999999864 56 8999998763
No 77
>1p3c_A Glutamyl-endopeptidase; serine protease, hydrolase; 1.50A {Bacillus intermedius} SCOP: b.47.1.1 PDB: 1p3e_A
Probab=99.34 E-value=4.9e-12 Score=121.11 Aligned_cols=157 Identities=20% Similarity=0.204 Sum_probs=101.0
Q ss_pred eEEEEEEEeCCEEEecccccCCC--CeE----EEEEcC-----CCcEEEEEEEEecc--------CCCeEEEEecccccc
Q 009784 149 SSSSGFAIGGRRVLTNAHSVEHY--TQV----KLKKRG-----SDTKYLATVLAIGT--------ECDIAMLTVEDDEFW 209 (526)
Q Consensus 149 ~~GSGfvI~~g~ILT~aHvV~~~--~~i----~V~~~~-----~g~~~~a~vv~~d~--------~~DlAlLkv~~~~~~ 209 (526)
..|+|++|++.+|||+|||+.+. ..+ .|.+.. .+..+..+-+..++ .+||||||++.+ +.
T Consensus 30 ~~CgGtLIs~~~VLTAAHCv~~~~~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DiAll~L~~~-~~ 108 (215)
T 1p3c_A 30 SSCTGTLIAPNKILTNGHCVYNTASRSYSAKGSVYPGMNDSTAVNGSANMTEFYVPSGYINTGASQYDFAVIKTDTN-IG 108 (215)
T ss_dssp CEEEEEEEETTEEEECHHHHEETTTTEECCCCEEEETCBTTBCTTCCEEEEEEECCHHHHHHCCGGGCCEEEEESSC-HH
T ss_pred ceEEEEEEeCCEEEECccEeccCCCCccccceEEEEcccCCCCCCCeEEEEEEEeCCccccCCCcccCEEEEEECCC-Cc
Confidence 68999999999999999999643 344 666632 12234555454443 469999999985 44
Q ss_pred cCceeeecCCCC-cCCCcEEEEeeCCCC------CceeEEEEEEeceeeeeccCCceeeeEEEEcccCCCCCCCCeeecC
Q 009784 210 EGVLPVEFGELP-ALQDAVTVVGYPIGG------DTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFND 282 (526)
Q Consensus 210 ~~~~pl~l~~~~-~~g~~V~~iG~p~~~------~~~sv~~GiVs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~ 282 (526)
..+.|+.|.... ..++.++++||+... ....+...+++...+.. ...+...+.|+|||||+..
T Consensus 109 ~~v~pi~l~~~~~~~g~~~~~~Gwg~~~~~~~~~~l~~~~~~~~~~~~c~~----------~~~~~~~C~GDSGgPl~~~ 178 (215)
T 1p3c_A 109 NTVGYRSIRQVTNLTGTTIKISGYPGDKMRSTGKVSQWEMSGSVTREDTNL----------AYYTIDTFSGNSGSAMLDQ 178 (215)
T ss_dssp HHHCCCCBCCCSCCTTCEEEEEECCHHHHHHHSSCCCEEEEEECCEECSSE----------EEECCCCCTTCTTCEEECT
T ss_pred ccceeeecCCCcccCCCeEEEecCCCCCcccccceechhccCccCcccchh----------eeeccccCCCCCCCeeEcc
Confidence 457888887543 568999999997321 01123334443332211 1125678999999999988
Q ss_pred CCeEEEEEeeccccCccccccccccHHHHHHHHHHH
Q 009784 283 KGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDY 318 (526)
Q Consensus 283 ~G~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l 318 (526)
+|.++||++.+.... ...+...-+....+++++.
T Consensus 179 ~g~lvGi~S~g~~c~--~~p~v~t~v~~~~~WI~~~ 212 (215)
T 1p3c_A 179 NQQIVGVHNAGYSNG--TINGGPKATAAFVEFINYA 212 (215)
T ss_dssp TSCEEEECCEEEGGG--TEEEEEBCCHHHHHHHHHH
T ss_pred CCeEEEEEecccCCC--ccCceeEechHHHHHHHHH
Confidence 899999998764211 2223334455566666554
No 78
>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation, pyroglutamation, eight-membered R peptide bond, hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida}
Probab=99.34 E-value=2.8e-11 Score=117.41 Aligned_cols=187 Identities=17% Similarity=0.127 Sum_probs=114.0
Q ss_pred eCCCCCCccccCCC----cceEEEEEEEeCCEEEecccccCCC--CeEEEEEcC--------CCcEEEEEEEEecc----
Q 009784 133 TEPNFSLPWQRKRQ----YSSSSSGFAIGGRRVLTNAHSVEHY--TQVKLKKRG--------SDTKYLATVLAIGT---- 194 (526)
Q Consensus 133 ~~~~~~~P~~~~~~----~~~~GSGfvI~~g~ILT~aHvV~~~--~~i~V~~~~--------~g~~~~a~vv~~d~---- 194 (526)
.....++||..... ....|+|.+|++.+|||+|||+.+. ..+.|.+.. ..+.+..+-+..++
T Consensus 6 ~a~~~~~Pw~v~l~~~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~ 85 (238)
T 1ym0_A 6 EARPYEFPWQVSVRRKSSDSHFCGGSIINDRWVVCAAHCMQGEAPALVSLVVGEHDSSAASTVRQTHDVDSIFVNENYDP 85 (238)
T ss_dssp ECCTTSSTTEEEEEEGGGTEEEEEEEEEETTEEEECHHHHTTCCGGGEEEEESCSBTTSCCSSCEEEEEEEEEECTTCCT
T ss_pred ECCCCccCCEEEEEeCCCCceEEEEEEeeCCEEEECHHhCCCCCCceEEEEEcccccCCCCCCceEEEEEEEEECCCCCC
Confidence 34445667765432 1357999999999999999999764 557777642 12344555455554
Q ss_pred ---CCCeEEEEecccc-cccCceeeecCCCC--cCCCcEEEEeeCCCCC--------ceeEEEEEEeceeeeeccCC-ce
Q 009784 195 ---ECDIAMLTVEDDE-FWEGVLPVEFGELP--ALQDAVTVVGYPIGGD--------TISVTSGVVSRIEILSYVHG-ST 259 (526)
Q Consensus 195 ---~~DlAlLkv~~~~-~~~~~~pl~l~~~~--~~g~~V~~iG~p~~~~--------~~sv~~GiVs~~~~~~~~~~-~~ 259 (526)
.+||||||++.+. +...+.|+.|.... ..++.+++.||..... ...+..-+++...+...... ..
T Consensus 86 ~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~ 165 (238)
T 1ym0_A 86 ATLENDVSVIKTAVAITFDINVGPICAPDPANDYVYRKSQCSGWGTINSGGVCCPAVLRYVTLNITTNAFCDAVYTSDTI 165 (238)
T ss_dssp TTCTTCCEEEEESSCCCCSSSCCCCBCCCTTCCCTTCEEEEEESCCSSTTCCSCCSBCEEEEEEECCHHHHHHHCTTSCC
T ss_pred CCCcccEEEEEeCCCccccCcccccCCCCCcCCCCCCceEEEeecCCCCCCCcCCccceEEEEEeeCHHHHhHhhccccc
Confidence 4699999998763 34567888887533 2578899999865321 11223333333333221111 11
Q ss_pred eeeEEEEc-------ccCCCCCCCCeeecC--CC--eEEEEEeeccccCccccccccccHHHHHHHHHHHHH
Q 009784 260 ELLGLQID-------AAINSGNSGGPAFND--KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEK 320 (526)
Q Consensus 260 ~~~~i~~d-------a~i~~G~SGGPlvn~--~G--~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 320 (526)
...+++.. ...|.|+|||||+.. +| .++||++.+..-. ....+....+....+++++..+
T Consensus 166 ~~~~~Ca~~~~~~~~~~~C~GDsGgPL~~~~~~~~~~l~Gi~S~g~~C~-~~~p~vyt~v~~~~~WI~~~i~ 236 (238)
T 1ym0_A 166 YDDMICATDNTGMTDRDSCQGDSGGPLSVKDGSGIFSLVGIVSWGIGCA-SGYPGVYSRVGFHAGWITDTIT 236 (238)
T ss_dssp CTTEEEEECSSCSSSCBCCTTTTTCEEEEECTTCCEEEEEEEEECSSSS-SSSCEEEEEHHHHHHHHHHHHH
T ss_pred CCCeEEecCCCCCCcCccCCCccCCeeEEECCCCCEEEEEEEeECCCCC-CCCCcEEEEHHHhHHHHHHHhc
Confidence 12245542 467899999999865 35 6999998764221 2223445556666677766543
No 79
>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation; 1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A
Probab=99.34 E-value=1.1e-11 Score=120.00 Aligned_cols=185 Identities=16% Similarity=0.100 Sum_probs=110.8
Q ss_pred CCCCCCccccCC------CcceEEEEEEEeCCEEEecccccCCCCeEEEEEcCC-----CcEEEEEEEEecc-------C
Q 009784 134 EPNFSLPWQRKR------QYSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGS-----DTKYLATVLAIGT-------E 195 (526)
Q Consensus 134 ~~~~~~P~~~~~------~~~~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~~-----g~~~~a~vv~~d~-------~ 195 (526)
....++||+... .....|+|.+|++.+|||+|||+.+...+.|.+... +..+..+-+..++ .
T Consensus 7 a~~~~~Pw~v~l~~~~~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~hp~y~~~~~~ 86 (230)
T 2hlc_A 7 AYTGLFPYQAGLDITLQDQRRVWCGGSLIDNKWILTAAHCVHDAVSVVVYLGSAVQYEGEAVVNSERIISHSMFNPDTYL 86 (230)
T ss_dssp CCTTTSTTEEEEEEEETTSCEEEEEEEEEETTEEEECHHHHTTEEEEEEEESCSBTTCCSEEEECSEEEECTTCBTTTTB
T ss_pred CCCCCCCcEEEEEEEecCCCCEEEEEEEeeCCEEEECHHHCCCCcceEEEEeeeecCCCCeEEEEEEEEECCCCCCCCcc
Confidence 334456665432 234579999999999999999999877788877421 1233333344443 4
Q ss_pred CCeEEEEecccccccCceeeecCCCC-----cCCCcEEEEeeCCCCCc----eeEEEEEEeceeeeeccCC-ceeeeEEE
Q 009784 196 CDIAMLTVEDDEFWEGVLPVEFGELP-----ALQDAVTVVGYPIGGDT----ISVTSGVVSRIEILSYVHG-STELLGLQ 265 (526)
Q Consensus 196 ~DlAlLkv~~~~~~~~~~pl~l~~~~-----~~g~~V~~iG~p~~~~~----~sv~~GiVs~~~~~~~~~~-~~~~~~i~ 265 (526)
+||||||+++..+.+.+.|+.|.... ..+..+++.||...... .....-+++...+...... .....+++
T Consensus 87 ~DiALl~L~~~~~~~~v~picLp~~~~~~~~~~~~~~~v~GwG~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~C 166 (230)
T 2hlc_A 87 NDVALIKIPHVEYTDNIQPIRLPSGEELNNKFENIWATVSGWGQSNTDTVILQYTYNLVIDNDRCAQEYPPGIIVESTIC 166 (230)
T ss_dssp TCCEEEECSCCCCCSSCCCCBCCCGGGGGCCCTTCEEEEEESSCCSSCCCBCEEEEEEEECHHHHHTTSCTTSSCTTEEE
T ss_pred ccEEEEEecCCCcCCcEeeeEcCCccccccccCCcEEEEEeeeecCCCCceeEEEEEEEeCHHHhhhhhCCCcccCCeEE
Confidence 79999999943455678888887533 24678999998754321 1233334443333221111 11123455
Q ss_pred Ec----ccCCCCCCCCeeecC-CCeEEEEEeeccccC-ccccccccccHHHHHHHHHHH
Q 009784 266 ID----AAINSGNSGGPAFND-KGKCVGIAFQSLKHE-DVENIGYVIPTPVIMHFIQDY 318 (526)
Q Consensus 266 ~d----a~i~~G~SGGPlvn~-~G~VVGI~~~~~~~~-~~~~~~~aIP~~~i~~~l~~l 318 (526)
.. ...+.|+|||||+.. ++.++||++.+.... .....+....+....+++++.
T Consensus 167 a~~~~~~~~C~GDSGgPl~~~~~~~l~Gi~S~g~~~~C~~~~p~vyt~V~~~~~WI~~~ 225 (230)
T 2hlc_A 167 GDTSDGKSPCFGDSGGPFVLSDKNLLIGVVSFVSGAGCESGKPVGFSRVTSYMDWIQQN 225 (230)
T ss_dssp ECCTTSCBCCTTCTTCEEEEGGGTEEEEEEEECCTTCTTSCCCEEEEEGGGGHHHHHHH
T ss_pred ecCCCCCCcCCCCCCCeeEECcCCEEEEEEEEeCCCCCCCCCCCEEEEhHHhHHHHHHh
Confidence 53 367899999999854 569999998754111 111223334444555555554
No 80
>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A* 2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D 2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B* 1lqd_B* 1nfu_A* 1nfw_A* ...
Probab=99.34 E-value=9.1e-12 Score=121.35 Aligned_cols=188 Identities=18% Similarity=0.151 Sum_probs=115.6
Q ss_pred eeCCCCCCccccCC---CcceEEEEEEEeCCEEEecccccCCCCeEEEEEcC--------CCcEEEEEEEEecc------
Q 009784 132 HTEPNFSLPWQRKR---QYSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRG--------SDTKYLATVLAIGT------ 194 (526)
Q Consensus 132 ~~~~~~~~P~~~~~---~~~~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~--------~g~~~~a~vv~~d~------ 194 (526)
......++||+... .....|+|.+|++.+|||+|||+.+...+.|.+.. ....+..+.+..++
T Consensus 5 ~~a~~~~~Pw~v~l~~~~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~ 84 (241)
T 2jkh_A 5 QECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRFTKET 84 (241)
T ss_dssp EECCTTSSTTEEEEECTTSCEEEEEEECSSSEEEECGGGGGSCSSCEEEESCSBTTCCCSCCEEECEEEEEECTTCBTTT
T ss_pred EECCCCCcCcEEEEEcCCCCcEEEEEEeeCCEEEEcHHHcCCCCcEEEEECCccCCCCCCCcEEEEeEEEEeCCCCCCCC
Confidence 34455667786633 23468999999999999999999877778887742 12234455555554
Q ss_pred -CCCeEEEEecccc-cccCceeeecCCCC------cCCCcEEEEeeCCCCC-------ceeEEEEEEeceeeeeccCCce
Q 009784 195 -ECDIAMLTVEDDE-FWEGVLPVEFGELP------ALQDAVTVVGYPIGGD-------TISVTSGVVSRIEILSYVHGST 259 (526)
Q Consensus 195 -~~DlAlLkv~~~~-~~~~~~pl~l~~~~------~~g~~V~~iG~p~~~~-------~~sv~~GiVs~~~~~~~~~~~~ 259 (526)
.+|||||+++.+. +...+.|+.|.... ..+..+++.||..... ...+..-+++...+........
T Consensus 85 ~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~ 164 (241)
T 2jkh_A 85 YDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGEQSTRLKMLEVPYVDRNSCKLSSSFII 164 (241)
T ss_dssp TBTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHTTTSSEEEEEESCBSSTTSCBCSBCEEEEEEEECHHHHHHHCSSCC
T ss_pred CCCcEEEEEECCcccCCCCEeeeEcCCCCcccccccCCCeEEEEecCCCCCCCCcCccccEeeeccccHHHhcccccCcC
Confidence 3699999998763 34567888887532 2468888999864321 1123333444333322111111
Q ss_pred eeeEEEEc-----ccCCCCCCCCeeecC-CC--eEEEEEeeccccCccccccccccHHHHHHHHHHHH
Q 009784 260 ELLGLQID-----AAINSGNSGGPAFND-KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYE 319 (526)
Q Consensus 260 ~~~~i~~d-----a~i~~G~SGGPlvn~-~G--~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l~ 319 (526)
...+++.. ...|.|+|||||+.. +| .++||++.+..-......+....+....+++++..
T Consensus 165 ~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~ 232 (241)
T 2jkh_A 165 TQNMFCAGYDTKQEDACQGDSGGPHVTRFKDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSM 232 (241)
T ss_dssp CTTEEEESCSSSSCBCCTTTTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHT
T ss_pred CCCeEEeeCCCCCCccCcCcCCCeeEEEECCEEEEEEEEEECCCCCCCCCceEEEEhHHHHHHHHHHh
Confidence 12345553 357899999999964 45 59999987653222222344455555666666654
No 81
>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens} PDB: 4fxg_H*
Probab=99.34 E-value=1.1e-11 Score=120.20 Aligned_cols=188 Identities=17% Similarity=0.172 Sum_probs=111.8
Q ss_pred eeeCCCCCCccccCCCcceEEEEEEEeCCEEEecccccCC----CCeEEEEEcCC------CcEEEEEEEEecc------
Q 009784 131 VHTEPNFSLPWQRKRQYSSSSSGFAIGGRRVLTNAHSVEH----YTQVKLKKRGS------DTKYLATVLAIGT------ 194 (526)
Q Consensus 131 ~~~~~~~~~P~~~~~~~~~~GSGfvI~~g~ILT~aHvV~~----~~~i~V~~~~~------g~~~~a~vv~~d~------ 194 (526)
.......++||.........|+|.+|++.+|||+|||+.+ ...+.|.+... ...+..+-+..++
T Consensus 4 G~~a~~~~~Pw~v~l~~~~~CgGtLI~~~~VLTAAhC~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~~~ 83 (242)
T 3tvj_B 4 GQKAKPGDFPWQVLILGGTTAAGALLYDNWVLTAAHAVYEQKHDASALDIRMGTLKRLSPHYTQAWSEAVFIHEGYTHDA 83 (242)
T ss_dssp CEECCTTSSTTEEEEESSEEEEEEEETTTEEEECHHHHSTTTTCSSCCEEEESCSBTTCSCCEEEEEEEEEECTTCCTTS
T ss_pred CeeCCCCCCCCEEEEecCCcEEEEEecCCEEEECHHHCCCCCCCcceEEEEeccccccCcccceeeEEEEEeCCCCCCCC
Confidence 3445566788887655567899999999999999999953 45567776421 1334444444443
Q ss_pred --CCCeEEEEecccc-cccCceeeecCCCC-----cCCCcEEEEeeCCCCCc------eeEEEEEEeceeeeecc-C---
Q 009784 195 --ECDIAMLTVEDDE-FWEGVLPVEFGELP-----ALQDAVTVVGYPIGGDT------ISVTSGVVSRIEILSYV-H--- 256 (526)
Q Consensus 195 --~~DlAlLkv~~~~-~~~~~~pl~l~~~~-----~~g~~V~~iG~p~~~~~------~sv~~GiVs~~~~~~~~-~--- 256 (526)
.+||||||++.+. +...+.|+.|.... ..++.+++.||...... ..+..-+++...+.... .
T Consensus 84 ~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~ 163 (242)
T 3tvj_B 84 GFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQRGFLARNLMYVDIPIVDHQKCTAAYEKPPY 163 (242)
T ss_dssp CSTTCCEEEEESSCCCCBTTBCCCBCCCTTGGGGSCTTCEEEEEESCCCTTSSCCSBCEEEEEEBCCHHHHHHHHHSTTS
T ss_pred CCcCcEEEEEECCccccCCCEecCCcCCCcccccccCCCEEEEEEeCCCCCCCcCccceEEeeeEEcHHHHHHhhccCCc
Confidence 4699999998763 44568888887533 35788999998653211 12223333332222111 0
Q ss_pred --CceeeeEEEEc-----ccCCCCCCCCeeecC---CC--eEEEEEeecc-ccCccccccccccHHHHHHHHHHH
Q 009784 257 --GSTELLGLQID-----AAINSGNSGGPAFND---KG--KCVGIAFQSL-KHEDVENIGYVIPTPVIMHFIQDY 318 (526)
Q Consensus 257 --~~~~~~~i~~d-----a~i~~G~SGGPlvn~---~G--~VVGI~~~~~-~~~~~~~~~~aIP~~~i~~~l~~l 318 (526)
......++++. ...|.|+|||||+.. +| .++||++.+. .-......+....+...++++++.
T Consensus 164 ~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPL~~~~~~~~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~ 238 (242)
T 3tvj_B 164 PRGSVTANMLCAGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWIENI 238 (242)
T ss_dssp CTTCCCTTEEEESCTTCCSBCCTTCTTCEEEEEETTTTEEEEEEEEEEEESSTTCTTCCEEEEEGGGGHHHHHHH
T ss_pred ccccccCCeEEECCCCCCCccccCCCCCeEEEEeCCCCcEEEEEEEEeCCCCCCCCCCCeEEEEHHHHHHHHHHH
Confidence 01122346653 467899999999853 34 4999998762 211112223344444444555443
No 82
>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG; 2.40A {Bos taurus} SCOP: b.47.1.2
Probab=99.34 E-value=1.9e-11 Score=118.14 Aligned_cols=158 Identities=19% Similarity=0.179 Sum_probs=97.8
Q ss_pred eCCCCCCccccCCC-----cceEEEEEEEeCCEEEecccccCCCCeEEEEEcC--------CCcEEEEEEEEecc-----
Q 009784 133 TEPNFSLPWQRKRQ-----YSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRG--------SDTKYLATVLAIGT----- 194 (526)
Q Consensus 133 ~~~~~~~P~~~~~~-----~~~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~--------~g~~~~a~vv~~d~----- 194 (526)
.....++||+.... ....|+|.+|++.||||+|||+.+ .+.|++.. ..+.+..+-+..++
T Consensus 6 ~a~~~~~Pw~v~l~~~~~~~~~~CgGsLI~~~~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~ 83 (227)
T 1euf_A 6 EAKPHSRPYMAFLLFKTSGKSHICGGFLVREDFVLTAAHCLGS--SINVTLGAHNIMERERTQQVIPVRRPIPHPDYNDE 83 (227)
T ss_dssp ECCTTSCTTEEEEEEESSSSEEEEEEEEEETTEEEECGGGCCE--EEEEEESCSBTTSCCTTCEEEEEEEEEECTTCCTT
T ss_pred ECCCCCcCCEEEEEEeCCCCceEEEEEEeeCCEEEECHHHCCC--CcEEEEcccccCCCCCccEEEEEEEEEeCCCCCCC
Confidence 34445566755331 146799999999999999999975 56666531 12344554455554
Q ss_pred --CCCeEEEEecccc-cccCceeeecCCCC---cCCCcEEEEeeCCCCC-------ceeEEEEEEeceeeeeccCCceee
Q 009784 195 --ECDIAMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGD-------TISVTSGVVSRIEILSYVHGSTEL 261 (526)
Q Consensus 195 --~~DlAlLkv~~~~-~~~~~~pl~l~~~~---~~g~~V~~iG~p~~~~-------~~sv~~GiVs~~~~~~~~~~~~~~ 261 (526)
.+||||||++.+. +...+.|+.|.... ..++.+++.||..... ...+..-+++...+..........
T Consensus 84 ~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~ 163 (227)
T 1euf_A 84 TLANDIMLLKLTRKADITDKVSPINLPRSLAEVKPGMMCSVAGWGRLGVNMPSTDKLQEVDLEVQSEEKCIARFKNYIPF 163 (227)
T ss_dssp TCTTCCEEEEESSCCCCCSSCCCCCCCCTTCCCCTTCEEEEEESCBSSTTCCBCSBCEEEEEEBCCTHHHHTTCTTCCTT
T ss_pred CCcCceEEEEECCcCcCCCceeccCCCCccccCCCCCEEEEEEEccCCCCCCCchhheEeEeccccHHHhhHhhcCcCCC
Confidence 3699999998763 34567888887532 4578899999864321 112222333332332211111111
Q ss_pred eEEEEc-----ccCCCCCCCCeeecCCCeEEEEEeec
Q 009784 262 LGLQID-----AAINSGNSGGPAFNDKGKCVGIAFQS 293 (526)
Q Consensus 262 ~~i~~d-----a~i~~G~SGGPlvn~~G~VVGI~~~~ 293 (526)
..++.. ...+.|+|||||+. +|.++||++.+
T Consensus 164 ~~~Ca~~~~~~~~~~~GDsGgPL~~-~~~l~Gi~S~g 199 (227)
T 1euf_A 164 TQICAGDPSKRKNSFSGDSGGPLVC-NGVAQGIVSYG 199 (227)
T ss_dssp TEEEESCTTSCCBCCTTCTTCEEEE-TTEEEEEEEEC
T ss_pred cEEEccCCCCCCcccccCCCCceEE-CCEEEEEEEEe
Confidence 246653 23448999999997 68999999876
No 83
>2asu_B Hepatocyte growth factor-like protein; serine proteinase, beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens}
Probab=99.34 E-value=2.2e-11 Score=118.23 Aligned_cols=181 Identities=13% Similarity=0.105 Sum_probs=108.7
Q ss_pred CCccccCCC---cceEEEEEEEeCCEEEecccccCC----CCeEEEEEcC----------CCcEEEEEEEEecc-CCCeE
Q 009784 138 SLPWQRKRQ---YSSSSSGFAIGGRRVLTNAHSVEH----YTQVKLKKRG----------SDTKYLATVLAIGT-ECDIA 199 (526)
Q Consensus 138 ~~P~~~~~~---~~~~GSGfvI~~g~ILT~aHvV~~----~~~i~V~~~~----------~g~~~~a~vv~~d~-~~DlA 199 (526)
++||..... ....|+|.+|++.+|||+|||+.+ ...+.|.+.. ..+.+..+-+..++ .+|||
T Consensus 8 ~~Pw~v~l~~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~v~~i~~hp~~~DiA 87 (234)
T 2asu_B 8 NSPWTVSLRNRQGQHFCGGSLVKEQWILTARQCFSSCHMPLTGYEVWLGTLFQNPQHGEPSLQRVPVAKMVCGPSGSQLV 87 (234)
T ss_dssp CCTTEEEEECTTSCEEEEEEEEETTEEEEEGGGSSCTTCCCTTCEEEESCSBSSCCTTCTTCEEEEEEEEEECSTTCCEE
T ss_pred CCcceEEeeccCCCEEEEEEEEeCCEEEECHHHcCCCCCCcccEEEEEeeeeccCCCCCCceEEEEEEEEecCCCCCCeE
Confidence 466765332 346899999999999999999964 3456776631 11234444444554 58999
Q ss_pred EEEecccc-cccCceeeecCCCC---cCCCcEEEEeeCCCCC------ceeEEEEEEeceeeeeccCCceeeeEEEEc--
Q 009784 200 MLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGD------TISVTSGVVSRIEILSYVHGSTELLGLQID-- 267 (526)
Q Consensus 200 lLkv~~~~-~~~~~~pl~l~~~~---~~g~~V~~iG~p~~~~------~~sv~~GiVs~~~~~~~~~~~~~~~~i~~d-- 267 (526)
|||++.+. +...+.|+.|.... ..++.+++.||..... ...+..-+++...+............++..
T Consensus 88 Ll~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~ 167 (234)
T 2asu_B 88 LLKLERSVTLNQRVALICLPPEWYVVPPGTKCEIAGWGETKGTGNDTVLNVALLNVISNQECNIKHRGRVRESEMCTEGL 167 (234)
T ss_dssp EEEESSCCCCSSSSCCCBCCCTTCCCCTTCEEEEEESSCCTTSSCTTBCEEEEEEEECHHHHHHHTTTCCCTTEEEECCC
T ss_pred EEEeCCcCcCCCcEeccCCCCccccCCCCCEEEEEeCCccCCCCCCccceEEEeeEEcHHHcccccCCccCcceEeecCC
Confidence 99999763 44568888887532 3578899999865321 122333444443332221111122345553
Q ss_pred ---ccCCCCCCCCeeecCC-C--eEEEEEeeccccCccccccccccHHHHHHHHHHH
Q 009784 268 ---AAINSGNSGGPAFNDK-G--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDY 318 (526)
Q Consensus 268 ---a~i~~G~SGGPlvn~~-G--~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l 318 (526)
...|.|+|||||+... | .++||++.+..-.....-+....+....+++++.
T Consensus 168 ~~~~~~C~GDSGgPL~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~~ 224 (234)
T 2asu_B 168 LAPVGACEGDYGGPLACFTHNSWVLEGIIIPNRVCARSRWPAVFTRVSVFVDWIHKV 224 (234)
T ss_dssp SSCCBCCTTCTTCEEEEEETTEEEEEEEECCCSSSSCTTCCEEEEEGGGSHHHHHHH
T ss_pred CCCCeeccCCCCCceEEEECCeEEEEEEEEcCCCCCCCCCCeEEEEHHHHHHHHHHH
Confidence 3578999999998653 3 7999998764221112233344444455555554
No 84
>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2
Probab=99.33 E-value=1.8e-11 Score=118.84 Aligned_cols=162 Identities=19% Similarity=0.180 Sum_probs=102.5
Q ss_pred eCCCCCCccccCCCc------ceEEEEEEEeCCEEEecccccCCCCeEEEEEcCC--------CcEEEEEEEEecc----
Q 009784 133 TEPNFSLPWQRKRQY------SSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGS--------DTKYLATVLAIGT---- 194 (526)
Q Consensus 133 ~~~~~~~P~~~~~~~------~~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~~--------g~~~~a~vv~~d~---- 194 (526)
.....++||...... ...|+|.+|++.+|||+|||+.+...+.|.+... .+.+..+-+..++
T Consensus 6 ~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~ 85 (236)
T 1elt_A 6 VAQPNSWPWQISLQYKSGSSYYHTCGGSLIRQGWVMTAAHCVDSARTWRVVLGEHNLNTNEGKEQIMTVNSVFIHSGWNS 85 (236)
T ss_dssp ECCTTSSTTEEEEEEEETTEEEEEEEEEEEETTEEEECHHHHSSCCCEEEEESCSBTTSCCSCCEEECEEEEEECTTCCT
T ss_pred ECCCCCCCCEEEEEEecCCceeeEEEEEEEeCCEEEECHHhhCCcCceEEEEccccCCCCCCCcEEEEEEEEEECCCCCC
Confidence 334455666553321 2579999999999999999998877888887421 2334455455544
Q ss_pred -----CCCeEEEEecccc-cccCceeeecCCCC---cCCCcEEEEeeCCCCC-------ceeEEEEEEeceeeeecc-CC
Q 009784 195 -----ECDIAMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGD-------TISVTSGVVSRIEILSYV-HG 257 (526)
Q Consensus 195 -----~~DlAlLkv~~~~-~~~~~~pl~l~~~~---~~g~~V~~iG~p~~~~-------~~sv~~GiVs~~~~~~~~-~~ 257 (526)
.+||||||++.+. +...+.|+.|.... ..++.+++.||..... ...+..-+++...+.... .+
T Consensus 86 ~~~~~~~DiALl~L~~~~~~~~~v~picL~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~ 165 (236)
T 1elt_A 86 DDVAGGYDIALLRLNTQASLNSAVQLAALPPSNQILPNNNPCYITGWGKTSTGGPLSDSLKQAWLPSVDHATCSSSGWWG 165 (236)
T ss_dssp TCGGGCCCCEEEEESSCCCCSSSCCCCCCCCTTCCCCTTCCEEEEESCCSSTTCCCCSBCEEEECCEECHHHHTSTTTTG
T ss_pred CCCCCCccEEEEECCCCCccCCcEEeccCCCccccCCCCCEEEEEeCCCcCCCCCcChhheEeEeeecCHHHhccccccC
Confidence 5699999998753 34567888887532 3578899999875321 112223334433332210 11
Q ss_pred -ceeeeEEEEc---ccCCCCCCCCeeecC-CC--eEEEEEeecc
Q 009784 258 -STELLGLQID---AAINSGNSGGPAFND-KG--KCVGIAFQSL 294 (526)
Q Consensus 258 -~~~~~~i~~d---a~i~~G~SGGPlvn~-~G--~VVGI~~~~~ 294 (526)
.....+++.. ...|.|+|||||+.. +| .++||++.+.
T Consensus 166 ~~~~~~~~Ca~~~~~~~C~GDSGgPL~~~~~g~~~l~Gi~S~g~ 209 (236)
T 1elt_A 166 STVKTTMVCAGGGANSGCNGDSGGPLNCQVNGSYYVHGVTSFVS 209 (236)
T ss_dssp GGSCTTEEEECCSSCBCCTTCTTCEEEEEETTEEEEEEEEEECC
T ss_pred CcCCcceEEecCCCCccCCCCCCCeeEEEECCEEEEEEEEEEeC
Confidence 1112245553 457899999999864 56 8999998753
No 85
>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor; mutagenically deglycosyalted human plasma kallikrein protease domain; HET: BAM; 1.40A {Homo sapiens} PDB: 2anw_A*
Probab=99.33 E-value=2.4e-11 Score=118.39 Aligned_cols=187 Identities=19% Similarity=0.195 Sum_probs=112.0
Q ss_pred eCCCCCCccccCC-----CcceEEEEEEEeCCEEEecccccCCC---CeEEEEEcC--------CCcEEEEEEEEecc--
Q 009784 133 TEPNFSLPWQRKR-----QYSSSSSGFAIGGRRVLTNAHSVEHY---TQVKLKKRG--------SDTKYLATVLAIGT-- 194 (526)
Q Consensus 133 ~~~~~~~P~~~~~-----~~~~~GSGfvI~~g~ILT~aHvV~~~---~~i~V~~~~--------~g~~~~a~vv~~d~-- 194 (526)
.....++||+... .....|+|.+|++.||||+|||+.+. ..+.|.+.. +...+..+-+..++
T Consensus 6 ~a~~~~~Pw~v~l~~~~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y 85 (241)
T 2any_A 6 ESSWGEWPWQVSLQVKLTAQRHLCGGSLIGHQWVLTAAHCFDGLPLQDVWRIYSGILELSDITKDTPFSQIKEIIIHQNY 85 (241)
T ss_dssp ECCTTSSTTEEEEEEESSSEEEEEEEEEEETTEEEECGGGGSSCCCSTTEEEECSCSBGGGCCTTSCCBCEEEEEECTTC
T ss_pred ECCCCCCCcEEEEEEEcCCCceEEEEEEecCCEEEECHHHcCCCCCCccEEEEeeeeeccccccCceEEeeEEEEECCCC
Confidence 3444566776543 23357999999999999999999754 346666421 12234444455554
Q ss_pred -----CCCeEEEEecccc-cccCceeeecCCC---CcCCCcEEEEeeCCCCCc-------eeEEEEEEeceeeeeccCC-
Q 009784 195 -----ECDIAMLTVEDDE-FWEGVLPVEFGEL---PALQDAVTVVGYPIGGDT-------ISVTSGVVSRIEILSYVHG- 257 (526)
Q Consensus 195 -----~~DlAlLkv~~~~-~~~~~~pl~l~~~---~~~g~~V~~iG~p~~~~~-------~sv~~GiVs~~~~~~~~~~- 257 (526)
.+||||||++.+. +...+.|+.|... ...++.+++.||...... ..+..-+++...+......
T Consensus 86 ~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~ 165 (241)
T 2any_A 86 KVSEGNHDIALIKLQAPLEYTEFQKPISLPSKGDTSTIYTNCWVTGWGFSKEKGEIQNILQKVNIPLVTNEECQKRYQDY 165 (241)
T ss_dssp CTTSSSSCCEEEEESSCCCCBTTBCCCCCCCSSCCSTTCSEEEEEESSCSSTTCCCCSBCEEEEEEEECHHHHHTTSCTT
T ss_pred CCCCCCCCeEEEEeCCcccCCCCcceeEcCCcccCCCCCCeEEEEecccCCCCCCcCchhheeEeEEeCHHHhhhHhccC
Confidence 4699999998763 3456788888653 245788999998653211 1233344444333221111
Q ss_pred ceeeeEEEEc-----ccCCCCCCCCeeecC-CC--eEEEEEeeccccCccccccccccHHHHHHHHHHHH
Q 009784 258 STELLGLQID-----AAINSGNSGGPAFND-KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYE 319 (526)
Q Consensus 258 ~~~~~~i~~d-----a~i~~G~SGGPlvn~-~G--~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l~ 319 (526)
.....++++. ...|.|+|||||+.. +| .++||++.+..-.....-+...-+...++++++..
T Consensus 166 ~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~l~GI~S~g~~c~~~~~p~vyt~V~~~~~WI~~~~ 235 (241)
T 2any_A 166 KITQRMVCAGYKEGGKDACKGDSGGPLVCKHNGMWRLVGITSWGEGCARREQPGVYTKVAEYMDWILEKT 235 (241)
T ss_dssp CSCTTEEEECCTTCCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHH
T ss_pred CCCcCcEeecCCCCCCccCCCCCCCcEEEEECCEEEEEEEEEecCCCCCCCCCeEEEEHHHhHHHHHHHh
Confidence 1112346552 357899999999865 45 69999987653222222344455555566666544
No 86
>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus} SCOP: b.47.1.2
Probab=99.33 E-value=4e-11 Score=115.12 Aligned_cols=165 Identities=18% Similarity=0.182 Sum_probs=104.1
Q ss_pred ceEEEEEEEeCCEEEecccccCCCCeEEEEEcC--------CCcEEEEEEEEeccC-------CCeEEEEecccc-cccC
Q 009784 148 SSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRG--------SDTKYLATVLAIGTE-------CDIAMLTVEDDE-FWEG 211 (526)
Q Consensus 148 ~~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~--------~g~~~~a~vv~~d~~-------~DlAlLkv~~~~-~~~~ 211 (526)
...|+|.+|++.+|||+|||+.. .+.|.+.. ....+..+-+..++. +||||||++.+. +...
T Consensus 27 ~~~CgGtLI~~~~VLTAAhC~~~--~~~v~~g~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~L~~~~~~~~~ 104 (224)
T 3rp2_A 27 RVICGGFLISRQFVLTAAHCKGR--EITVILGAHDVRKRESTQQKIKVEKQIIHESYNSVPNLHDIMLLKLEKKVELTPA 104 (224)
T ss_dssp EEEEEEEESSSSEEEECGGGCCS--EEEEEESCSBTTSCCTTCEEEEEEEEEECTTCCSSSCCSCCEEEEESSCCCCBTT
T ss_pred EEEEEeEEeeCCEEEEchhcCCC--CcEEEEeccccCcCCCCcEEEEEEEEEECCCccCCCCCccEEEEEcCCCcccCCc
Confidence 45799999999999999999853 56666531 123455555556654 699999998763 3456
Q ss_pred ceeeecCCCC---cCCCcEEEEeeCCCCC-------ceeEEEEEEeceeeeeccCCceeeeEEEEc-----ccCCCCCCC
Q 009784 212 VLPVEFGELP---ALQDAVTVVGYPIGGD-------TISVTSGVVSRIEILSYVHGSTELLGLQID-----AAINSGNSG 276 (526)
Q Consensus 212 ~~pl~l~~~~---~~g~~V~~iG~p~~~~-------~~sv~~GiVs~~~~~~~~~~~~~~~~i~~d-----a~i~~G~SG 276 (526)
+.|+.|.... ..+..+++.||..... ...+...+++...+..+.. ......++.. ...+.|+||
T Consensus 105 v~pi~l~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~-~~~~~~~Ca~~~~~~~~~C~GDsG 183 (224)
T 3rp2_A 105 VNVVPLPSPSDFIHPGAMCWAAGWGKTGVRDPTSYTLREVELRIMDEKACVDYRY-YEYKFQVCVGSPTTLRAAFMGDSG 183 (224)
T ss_dssp BCCCCCCCTTCCCCTTCEEEEEESSEEETTEEECSBCEEEEEEEECGGGTTTTTC-CCTTTEEEECCTTSCCBCCTTTTT
T ss_pred ccceecCCcccCCCCCCEEEEEeCCCCCCCCCCCceeeEeeeeecChHHhccccc-cCcCCEEEecCCCCCCeeccCCCC
Confidence 7788776433 4578899999854211 1223344444444322111 1111234442 357889999
Q ss_pred CeeecCCCeEEEEEeeccccCccccccccccHHHHHHHHHHH
Q 009784 277 GPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDY 318 (526)
Q Consensus 277 GPlvn~~G~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l 318 (526)
|||+. ++.++||++.+.... ..-+....+...++++++.
T Consensus 184 gPl~~-~~~l~Gi~S~g~~c~--~~p~vyt~v~~y~~WI~~~ 222 (224)
T 3rp2_A 184 GPLLC-AGVAHGIVSYGHPDA--KPPAIFTRVSTYVPWINAV 222 (224)
T ss_dssp CEEEE-TTEEEEEEEECCTTC--CSCEEEEEHHHHHHHHHHH
T ss_pred CeEEE-cceeeEEEEECCCCC--CCCcEEEEHHHhHHHHHHH
Confidence 99998 679999998765321 1244556666666666654
No 87
>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase, secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A 2zgj_A
Probab=99.33 E-value=3.5e-11 Score=117.44 Aligned_cols=187 Identities=18% Similarity=0.170 Sum_probs=111.3
Q ss_pred eCCCCCCccccCCC--cceEEEEEEEeCCEEEecccccCCCC-eEEEEEcC-----CCcEEEEEEEEec--------cCC
Q 009784 133 TEPNFSLPWQRKRQ--YSSSSSGFAIGGRRVLTNAHSVEHYT-QVKLKKRG-----SDTKYLATVLAIG--------TEC 196 (526)
Q Consensus 133 ~~~~~~~P~~~~~~--~~~~GSGfvI~~g~ILT~aHvV~~~~-~i~V~~~~-----~g~~~~a~vv~~d--------~~~ 196 (526)
.....++||+.... ....|+|.+|++.+|||+|||+.+.. .+.|.+.. .+..+..+-+..+ ..+
T Consensus 6 ~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~ 85 (240)
T 2zgc_A 6 EVIPHSRPYMASLQRNGSHLCGGVLVHPKWVLTAAHCLAQRMAQLRLVLGLHTLDSPGLTFHIKAAIQHPRYKPVPALEN 85 (240)
T ss_dssp ECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECGGGGCSCGGGEEEEESCSBSSSCCEEEEEEEEEECTTCBCTTSCBS
T ss_pred ECCCCCcCcEEEEEeCCCeEEEEEEEcCCEEEEcHHhcCCCCCCEEEEecccccCCCCeEEEEEEEEECCCCCCCCCCcc
Confidence 34445667765432 23689999999999999999997653 57777632 1234454444443 347
Q ss_pred CeEEEEecccc-cccCceeeecCCCC---cCCCcEEEEeeCCCCC-------ceeEEEEEEeceeeee--ccCCceeeeE
Q 009784 197 DIAMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGD-------TISVTSGVVSRIEILS--YVHGSTELLG 263 (526)
Q Consensus 197 DlAlLkv~~~~-~~~~~~pl~l~~~~---~~g~~V~~iG~p~~~~-------~~sv~~GiVs~~~~~~--~~~~~~~~~~ 263 (526)
||||||++.+. +...+.|+.|.... ..++.+++.||..... ...+..-+++...+.. ...+.....+
T Consensus 86 DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~ 165 (240)
T 2zgc_A 86 DLALLQLDGKVKPSRTIRPLALPSKRQVVAAGTRCSMAGWGLTHQGGRLSRVLRELDLQVLDTRMCNNSRFWNGSLSPSM 165 (240)
T ss_dssp CCEEEEESSCCCCCSSCCCCCCCCTTCCCCTTCEEEEEECCBSSTTCCBCSBCEEEEEEECCHHHHTSTTTTTTCCCTTE
T ss_pred cEEEEEeCCcccCCCceeeeEcCCCCCCCCCCCEEEEEECCcccCCCCcCceeeeeeeeecCHHHhCCccccCCCCCCce
Confidence 99999998763 34467888887533 4578999999864321 1122333343333322 1111111234
Q ss_pred EEEc-----ccCCCCCCCCeeecCC-CeEEEEEeecccc-CccccccccccHHHHHHHHHHHH
Q 009784 264 LQID-----AAINSGNSGGPAFNDK-GKCVGIAFQSLKH-EDVENIGYVIPTPVIMHFIQDYE 319 (526)
Q Consensus 264 i~~d-----a~i~~G~SGGPlvn~~-G~VVGI~~~~~~~-~~~~~~~~aIP~~~i~~~l~~l~ 319 (526)
+++. ...|.|+|||||+..+ ..++||++.+... .....-+....+...++++++..
T Consensus 166 ~Ca~~~~~~~~~C~GDSGgPL~~~~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~~ 228 (240)
T 2zgc_A 166 VCLAADSKDQAPCKGDSGGPLVCGKGRVLAGVLSFSSRVCTDIFKPPVATAVAPYVSWIRKVT 228 (240)
T ss_dssp EEEECSSTTCBCCTTCTTCEEEETTTTEEEEEECCCCSSTTCTTSCCEEEESGGGHHHHHHHH
T ss_pred EeeccCCCCCccCCCCccCeeEECCCCEEEEEEEECCCCCCCCCCCcEEEEHHHhHHHHHHHH
Confidence 5542 3578999999999742 3899999875311 11112334444455556666554
No 88
>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease (elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2
Probab=99.32 E-value=1.2e-11 Score=120.48 Aligned_cols=159 Identities=16% Similarity=0.223 Sum_probs=100.1
Q ss_pred CCCCCCccccCCC-----cceEEEEEEEeCCEEEecccccCC--CCeEEEEEcC-------CCcEEEEEEEEeccCC---
Q 009784 134 EPNFSLPWQRKRQ-----YSSSSSGFAIGGRRVLTNAHSVEH--YTQVKLKKRG-------SDTKYLATVLAIGTEC--- 196 (526)
Q Consensus 134 ~~~~~~P~~~~~~-----~~~~GSGfvI~~g~ILT~aHvV~~--~~~i~V~~~~-------~g~~~~a~vv~~d~~~--- 196 (526)
....++||..... ....|+|.+|++.+|||+|||+.+ ...+.|.+.. +++.+..+-+..++.+
T Consensus 7 a~~~~~Pw~v~l~~~~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~v~~i~~hp~y~~~ 86 (241)
T 1m9u_A 7 ASPGEFPWQLSQQRQSGSWSHSCGASLLSSTSALSASHCVDGVLPNNIRVIAGLWQQSDTSGTQTANVDSYTMHENYGAG 86 (241)
T ss_dssp CCTTSSTTEEEEEEESSSEEEEEEEEECSSSEEEECHHHHTTCCGGGEEEEESCSBTTCCTTCEEEEEEEEEECTTTTCS
T ss_pred CCCCCcCeEEEEEecCCceeeeeEEEEEeCCEEEecHHhCCCCCcceEEEEEEeecCCCCCCceEEEEEEEEeCCCcCCC
Confidence 3445566655321 236799999999999999999986 3567777631 2344556556666544
Q ss_pred ------CeEEEEecccc-cccCceeeecCCC-C--cCCCcEEEEeeCCCCCc-------eeEEEEEEeceeeee-ccC-C
Q 009784 197 ------DIAMLTVEDDE-FWEGVLPVEFGEL-P--ALQDAVTVVGYPIGGDT-------ISVTSGVVSRIEILS-YVH-G 257 (526)
Q Consensus 197 ------DlAlLkv~~~~-~~~~~~pl~l~~~-~--~~g~~V~~iG~p~~~~~-------~sv~~GiVs~~~~~~-~~~-~ 257 (526)
||||||++.+. +...+.|+.|... . ..++.+++.||...... ..+..-+++...+.. +.. .
T Consensus 87 ~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~ 166 (241)
T 1m9u_A 87 TASYSNDIAILHLATSISLGGNIQAAVLPANNNNDYAGTTCVISGWGRTDGTNNLPDILQKSSIPVITTAQCTAAMVGVG 166 (241)
T ss_dssp SSTTTTCCEEEEESSCCCCCSSCCCCCCCSCSSCCCTTCEEEEEESSCSSSSSCCCSBCEEEEEEBCCHHHHHHHHTTST
T ss_pred CCcccccEEEEEecCccccCCCccccCcCCCcCCCCCCCEEEEEeCcccCCCCCcccceeEeeEEEEcHHHhhhhhcccC
Confidence 99999998763 4456788888754 2 25788999998653211 122222333322322 111 1
Q ss_pred c--eeeeEEEEc-----ccCCCCCCCCeeecCCC--eEEEEEee
Q 009784 258 S--TELLGLQID-----AAINSGNSGGPAFNDKG--KCVGIAFQ 292 (526)
Q Consensus 258 ~--~~~~~i~~d-----a~i~~G~SGGPlvn~~G--~VVGI~~~ 292 (526)
. ....++++. ...|.|+|||||+..+| .++||++.
T Consensus 167 ~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~l~Gi~S~ 210 (241)
T 1m9u_A 167 GANIWDNHICVQDPAGNTGACNGDSGGPLNCPDGGTRVVGVTSW 210 (241)
T ss_dssp TCCCCTTEEEECCTTSCCBCCTTCTTCEEEEESSSEEEEEEEEE
T ss_pred CCcccCCcEEECcCCCCCeeecCcCCccEEEeCCCEEEEEEEEE
Confidence 1 112345553 35789999999997545 89999987
No 89
>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA inhibitor complex, covalent inhibitor, alternative splicing, blood coagulation; HET: INH; 1.60A {Homo sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A* 1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A* 1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A* 2fda_A* ...
Probab=99.32 E-value=2.8e-11 Score=117.70 Aligned_cols=186 Identities=18% Similarity=0.178 Sum_probs=110.8
Q ss_pred eCCCCCCccccCC-----CcceEEEEEEEeCCEEEecccccCCC---CeEEEEEcC--------CCcEEEEEEEEecc--
Q 009784 133 TEPNFSLPWQRKR-----QYSSSSSGFAIGGRRVLTNAHSVEHY---TQVKLKKRG--------SDTKYLATVLAIGT-- 194 (526)
Q Consensus 133 ~~~~~~~P~~~~~-----~~~~~GSGfvI~~g~ILT~aHvV~~~---~~i~V~~~~--------~g~~~~a~vv~~d~-- 194 (526)
.....++||+... .....|+|.+|++.+|||+|||+.+. ..+.|.+.. ++..+..+-+..++
T Consensus 6 ~a~~~~~Pw~v~l~~~~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y 85 (238)
T 3bg8_A 6 ASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYSGILNQSEIKEDTSFFGVQEIIIHDQY 85 (238)
T ss_dssp ECCTTSSTTEEEEEECSSSCEEEEEEEEEETTEEEECGGGGTTCCCGGGEEEECSCSBGGGCCTTSCCEEEEEEEECTTC
T ss_pred ECCCCCcCcEEEEEeecCCCcEEEEEEEeeCCEEEECHHHCCCCCCCceEEEEEeeccCCcCCCCceEEeeEEEEECCCC
Confidence 3445566776533 23457999999999999999999754 456776531 23445555555554
Q ss_pred -----CCCeEEEEecccc-cccCceeeecCCCC---cCCCcEEEEeeCCCCCc-------eeEEEEEEeceeeeeccCC-
Q 009784 195 -----ECDIAMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGDT-------ISVTSGVVSRIEILSYVHG- 257 (526)
Q Consensus 195 -----~~DlAlLkv~~~~-~~~~~~pl~l~~~~---~~g~~V~~iG~p~~~~~-------~sv~~GiVs~~~~~~~~~~- 257 (526)
.+||||||++.+. +...+.|+.|.... ..+..+++.||...... ..+..-+++...+......
T Consensus 86 ~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~ 165 (238)
T 3bg8_A 86 KMAESGYDIALLKLETTVNYTDSQRPISLPSKGERNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEECQKRYRGH 165 (238)
T ss_dssp CCGGGSCCCEEEEESSCCCCBTTBCCCBCCCGGGGSSCCCCEEEEESCCSSSSCCCCSBCEEEECCEECHHHHHHHCTTS
T ss_pred CCCCCCCcEEEEEECCccccCCCcccCCCCCCccCcCCCCeEEEEecCCCCCCCChhhhhcEeeEEEECHHHhhhhhcCC
Confidence 3699999998763 34567888887532 35788999998643211 1223334443333221111
Q ss_pred ceeeeEEEEc-----ccCCCCCCCCeeecC-CC--eEEEEEeeccccCccccccccccHHHHHHHHHHH
Q 009784 258 STELLGLQID-----AAINSGNSGGPAFND-KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDY 318 (526)
Q Consensus 258 ~~~~~~i~~d-----a~i~~G~SGGPlvn~-~G--~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l 318 (526)
.....+++.. ...|.|+|||||+.. +| .++||++.+..-.....-+...-+....+++++.
T Consensus 166 ~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI~~~ 234 (238)
T 3bg8_A 166 KITHKMICAGYREGGKDACKGDSGGPLSCKHNEVWHLVGITSWGEGCAQRERPGVYTNVVEYVDWILEK 234 (238)
T ss_dssp CCCTTEEEECCTTCCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHH
T ss_pred CCCCCeEeecCCCCCCCcCCCCCCcceEEEECCeEEEEEEEEECCCCCCCCCCcEEEeHHHHHHHHHHH
Confidence 1112346653 357899999999865 45 5999998764221112223344444455555543
No 90
>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B 1qrz_A
Probab=99.32 E-value=3.8e-11 Score=117.54 Aligned_cols=192 Identities=19% Similarity=0.186 Sum_probs=114.1
Q ss_pred EEeeeeCCCCCCccccCCC---cceEEEEEEEeCCEEEecccccCCC---CeEEEEEcCC--------CcEEEEEEEEec
Q 009784 128 VFCVHTEPNFSLPWQRKRQ---YSSSSSGFAIGGRRVLTNAHSVEHY---TQVKLKKRGS--------DTKYLATVLAIG 193 (526)
Q Consensus 128 I~~~~~~~~~~~P~~~~~~---~~~~GSGfvI~~g~ILT~aHvV~~~---~~i~V~~~~~--------g~~~~a~vv~~d 193 (526)
|.........++||+.... ....|+|.+|++.||||+|||+.+. ..+.|.+... .+.+...-++.+
T Consensus 18 IvgG~~a~~~~~Pw~v~l~~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~~~h 97 (247)
T 1ddj_A 18 VVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLEKSPRPSSYKVILGAHQEVNLEPHVQEIEVSRLFLE 97 (247)
T ss_dssp CTTCEECCTTSSTTEEEEECTTSCEEEEEEEEETTEEEECGGGGTTCSCGGGCEEEESCSBSSSCCTTCEEEEEEEEEEC
T ss_pred cCCCEECCCCCCCcEEEEEcCCCCeEEEEEEeeCCEEEEcHHHcCCCCCCccEEEEEcccccCccCCceEEEEeeeEEcC
Confidence 4444455556677765432 2358999999999999999999754 3466766311 123344334444
Q ss_pred c-CCCeEEEEecccc-cccCceeeecCCCC---cCCCcEEEEeeCCCCC------ceeEEEEEEeceeeeecc--CCcee
Q 009784 194 T-ECDIAMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGD------TISVTSGVVSRIEILSYV--HGSTE 260 (526)
Q Consensus 194 ~-~~DlAlLkv~~~~-~~~~~~pl~l~~~~---~~g~~V~~iG~p~~~~------~~sv~~GiVs~~~~~~~~--~~~~~ 260 (526)
+ .+||||||++.+. +.+.+.|+.|.... ..+..+++.||..... ...+..-+++...+.... .+...
T Consensus 98 p~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~ 177 (247)
T 1ddj_A 98 PTRKDIALLKLSSPAVITDKVIPACLPSPNYVVADRTECFITGWGETQGTFGAGLLKEAQLPVIENKVCNRYEFLNGRVQ 177 (247)
T ss_dssp TTSCSCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEECCCCSSSTTTTBCEEEEEEEECHHHHTSTTTTTTCCC
T ss_pred CCCCcEEEEEeCCceeeCCCEEeeecCCcccCCCCCCEEEEEEcccCCCCCCCccceEEeeeecCHHHhcchhccCCCCc
Confidence 4 5899999998763 44567888886432 3468899999865321 123344455544443221 11112
Q ss_pred eeEEEEc-----ccCCCCCCCCeeecC-CC--eEEEEEeeccccCccccccccccHHHHHHHHHHHH
Q 009784 261 LLGLQID-----AAINSGNSGGPAFND-KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYE 319 (526)
Q Consensus 261 ~~~i~~d-----a~i~~G~SGGPlvn~-~G--~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l~ 319 (526)
..+++.. ...|.|+|||||+.. +| .++||++.+..-.....-+...-+....+++++..
T Consensus 178 ~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI~~~~ 244 (247)
T 1ddj_A 178 STELCAGHLAGGTDSCQGDAGGPLVCFEKDKYILQGVTSWGLGCARPNKPGVYVRVSRFVTWIEGVM 244 (247)
T ss_dssp TTEEEESCSSSCCCBCCSCTTCEEEEECSSSEEEEEEECGGGCCBBTTBCEEEEEGGGSHHHHHHHH
T ss_pred CCeEeecCCCCCCccccCcCcCcEEEEECCcEEEEEEEEECCCCCCCCCCEEEEEhHHhHHHHHHHh
Confidence 2346553 357899999999864 33 69999987652211122233344444555555543
No 91
>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine proteinases, trypsin-like serine protease, tumor marker, hydrolase; 1.61A {Homo sapiens}
Probab=99.31 E-value=6.7e-11 Score=114.49 Aligned_cols=186 Identities=15% Similarity=0.145 Sum_probs=111.0
Q ss_pred eeCCCCCCccccCCC--cceEEEEEEEeCCEEEecccccCCC---CeEEEEEcC----CCcEEEEEEEEecc-------C
Q 009784 132 HTEPNFSLPWQRKRQ--YSSSSSGFAIGGRRVLTNAHSVEHY---TQVKLKKRG----SDTKYLATVLAIGT-------E 195 (526)
Q Consensus 132 ~~~~~~~~P~~~~~~--~~~~GSGfvI~~g~ILT~aHvV~~~---~~i~V~~~~----~g~~~~a~vv~~d~-------~ 195 (526)
......++||..... ....|+|.+|++.+|||+|||+.+. ..+.|.+.. ++..+..+-+..++ .
T Consensus 5 ~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~~v~~G~~~~~~~~~~~v~~i~~hp~y~~~~~~ 84 (232)
T 2oq5_A 5 TEVEEGEWPWQASLQWDGSHRCGATLINATWLVSAAHCFTTYKNPARWTASFGVTIKPSKMKRGLRRIIVHEKYKHPSHD 84 (232)
T ss_dssp EECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECGGGGSSCCCGGGEEEEESSBSTTCSEEEEEEEEEECTTCCTTCCT
T ss_pred EECCCCCCCeeEEEEeCCCeeEEEEEEcCCEEEECHHHcCCCCCCceEEEEEeeEECCCceEEeEEEEEeCCCCCCCCCC
Confidence 344455677766432 2367999999999999999999753 356777632 22344455455554 3
Q ss_pred CCeEEEEecccc-cccCceeeecCCCC---cCCCcEEEEeeCCCCC-------ceeEEEEEEeceeeeecc--CCceeee
Q 009784 196 CDIAMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGD-------TISVTSGVVSRIEILSYV--HGSTELL 262 (526)
Q Consensus 196 ~DlAlLkv~~~~-~~~~~~pl~l~~~~---~~g~~V~~iG~p~~~~-------~~sv~~GiVs~~~~~~~~--~~~~~~~ 262 (526)
+||||||++.+. +.+.+.|+.|.... ..++.+++.||..... ...+..-+++...+.... .......
T Consensus 85 ~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~ 164 (232)
T 2oq5_A 85 YDISLAELSSPVPYTNAVHRVCLPDASYEFQPGDVMFVTGFGALKNDGYSQNHLRQAQVTLIDATTCNEPQAYNDAITPR 164 (232)
T ss_dssp TCCEEEEESSCCCCCSSSCCCBCCCTTCCCCTTCEEEEEESCCSSTTCCCCSBCEEEEEEEECHHHHTSTTTTTTCCCTT
T ss_pred CCEEEEEecCCCccCCceeEeECCCccccCCCCCEEEEEECCccCCCCCCCceeeEeEEEEeCHHHcCCccccCCccCCC
Confidence 699999998763 44567888886532 3578899999864321 112333444443332211 1111123
Q ss_pred EEEEc-----ccCCCCCCCCeeecCC--C--eEEEEEeeccccCccccccccccHHHHHHHHHH
Q 009784 263 GLQID-----AAINSGNSGGPAFNDK--G--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQD 317 (526)
Q Consensus 263 ~i~~d-----a~i~~G~SGGPlvn~~--G--~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~ 317 (526)
+++.. ...|.|+|||||+..+ | .++||++.+..-.....-+...-+...++++++
T Consensus 165 ~~Ca~~~~~~~~~C~GDsGgPL~~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~ 228 (232)
T 2oq5_A 165 MLCAGSLEGKTDACQGDSGGPLVSSDARDIWYLAGIVSWGDECAKPNKPGVYTRVTALRDWITS 228 (232)
T ss_dssp EEEEECTTCSSBCCTTCTTCEEEEECTTSCEEEEEEEEECSSSSBTTBCEEEEETGGGHHHHHH
T ss_pred EEeecCCCCCCccCCCCCCCcEEEECCCCCEEEEEEEEeCCCCCCCCCCeEEEEhHHhHHHHHH
Confidence 46553 3678999999999643 3 699999876422111222333444445555544
No 92
>2qy0_B Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens} SCOP: b.47.1.2
Probab=99.31 E-value=8.4e-12 Score=121.47 Aligned_cols=187 Identities=16% Similarity=0.180 Sum_probs=112.4
Q ss_pred eeeCCCCCCccccCCCcceEEEEEEEeCCEEEecccccCC-------CCeEEEEEcCCC-------cEEEEEEEEeccC-
Q 009784 131 VHTEPNFSLPWQRKRQYSSSSSGFAIGGRRVLTNAHSVEH-------YTQVKLKKRGSD-------TKYLATVLAIGTE- 195 (526)
Q Consensus 131 ~~~~~~~~~P~~~~~~~~~~GSGfvI~~g~ILT~aHvV~~-------~~~i~V~~~~~g-------~~~~a~vv~~d~~- 195 (526)
.......++||+........|+|.+|++.||||+|||+.. ...+.|.+.... ..+..+-+..++.
T Consensus 4 G~~a~~~~~Pw~v~l~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~v~~i~~Hp~y 83 (242)
T 2qy0_B 4 GQKAKMGNFPWQVFTNIHGRGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVFLGHTNVEELMKLGNHPIRRVSVHPDY 83 (242)
T ss_dssp CEECCTTSSTTEEEEESSSEEEEEEETTTEEEECHHHHSCSSCCC----CCEEEESCSBHHHHHHHCCCCEEEEEECTTC
T ss_pred CEECCCCCCCcEEEEccCCCEEEEEEeCCEEEEcHHhccccccccCCCceEEEEEeeccccccccccceeEEEEEECCCC
Confidence 3445667789987655556899999999999999999973 234667664211 1233444444432
Q ss_pred ---------CCeEEEEecccc-cccCceeeecCCCC---cCCCcEEEEeeCCCCCc-----eeEEEEEEeceeeeeccC-
Q 009784 196 ---------CDIAMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGDT-----ISVTSGVVSRIEILSYVH- 256 (526)
Q Consensus 196 ---------~DlAlLkv~~~~-~~~~~~pl~l~~~~---~~g~~V~~iG~p~~~~~-----~sv~~GiVs~~~~~~~~~- 256 (526)
+||||||++.+. +...+.|+.|.... ..+..+++.||...... ..+..-+++...+.....
T Consensus 84 ~~~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~~~~~~~~~C~~~~~~ 163 (242)
T 2qy0_B 84 RQDESYNFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKIAHDLRFVRLPVANPQACENWLRG 163 (242)
T ss_dssp CTTCSSCCTTCCEEEEESSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECCCCSSSCCSBCEEEEEEBCCHHHHHHHHHH
T ss_pred ccCcCCCCCCcEEEEEECCCCcCCCCcceeecCCCccccCCCCeEEEEeeccCCCcCCccceEEEEEEeCHHHHHHHhcc
Confidence 499999998763 44568888887543 35788999998654321 122233333322221100
Q ss_pred ----CceeeeEEEEc-----ccCCCCCCCCeeecCC---C--eEEEEEeeccccCccccccccccHHHHHHHHHHHH
Q 009784 257 ----GSTELLGLQID-----AAINSGNSGGPAFNDK---G--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYE 319 (526)
Q Consensus 257 ----~~~~~~~i~~d-----a~i~~G~SGGPlvn~~---G--~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l~ 319 (526)
......++++. ...|.|+|||||+..+ | .++||++.+..-.. +.+...-+....+++++..
T Consensus 164 ~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPl~~~~~~~~~~~l~Gi~S~g~~C~~--~~~vyt~V~~y~~WI~~~~ 238 (242)
T 2qy0_B 164 KNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCSR--GYGFYTKVLNYVDWIKKEM 238 (242)
T ss_dssp TTCCCCCCTTEEEESCTTCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSS--SCEEEEEGGGGHHHHHHHT
T ss_pred ccccccCCCCEEeccCCCCCCccccCCCCCcEEEEECCCCeEEEEEEEEECCCcCC--CCcEEEEHHHHHHHHHHHh
Confidence 01112346653 3578999999998632 2 59999987653211 2344455555566665543
No 93
>2r0l_A Hepatocyte growth factor activator; serine protease, antibody, allosteric inhibitor, EGF-like DO glycoprotein, hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A*
Probab=99.31 E-value=4e-11 Score=117.13 Aligned_cols=188 Identities=17% Similarity=0.138 Sum_probs=112.9
Q ss_pred eeCCCCCCccccCCCc-ceEEEEEEEeCCEEEecccccCCC---CeEEEEEcCC--------CcEEEEEEEEecc-----
Q 009784 132 HTEPNFSLPWQRKRQY-SSSSSGFAIGGRRVLTNAHSVEHY---TQVKLKKRGS--------DTKYLATVLAIGT----- 194 (526)
Q Consensus 132 ~~~~~~~~P~~~~~~~-~~~GSGfvI~~g~ILT~aHvV~~~---~~i~V~~~~~--------g~~~~a~vv~~d~----- 194 (526)
......++||+..... ...|+|.+|++.||||+|||+.+. ..+.|.+... ...+..+-+..++
T Consensus 5 ~~a~~~~~Pw~v~l~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~ 84 (248)
T 2r0l_A 5 SSSLPGSHPWLAAIYIGDSFCAGSLVHTCWVVSAAHCFSHSPPRDSVSVVLGQHFFNRTTDVTQTFGIEKYIPYTLYSVF 84 (248)
T ss_dssp EECCTTSSTTEEEEEETTEEEEEEEEETTEEEECGGGGTTCCCGGGEEEEESCCBTTCCCSSCEEECEEEEEECTTCCTT
T ss_pred ccCCCCCCCeEEEEEcCCceEEEEEEcCCEEEECHHHcCCCCCcCcEEEEEEeEEcCCCCCccEEEeeeEEEeCCccCcC
Confidence 3445566777664322 368999999999999999999764 4577877421 2234444444332
Q ss_pred ---CCCeEEEEeccc-----ccccCceeeecCCC---CcCCCcEEEEeeCCCCCc--------eeEEEEEEeceeeeec-
Q 009784 195 ---ECDIAMLTVEDD-----EFWEGVLPVEFGEL---PALQDAVTVVGYPIGGDT--------ISVTSGVVSRIEILSY- 254 (526)
Q Consensus 195 ---~~DlAlLkv~~~-----~~~~~~~pl~l~~~---~~~g~~V~~iG~p~~~~~--------~sv~~GiVs~~~~~~~- 254 (526)
.+||||||++.+ .+...+.|+.|... ...++.+++.||...... ..+..-+++...+...
T Consensus 85 ~~~~~DiALl~L~~~~~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~ 164 (248)
T 2r0l_A 85 NPSDHDLVLIRLKKKGDRCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENVSGYSSSLREALVPLVADHKCSSPE 164 (248)
T ss_dssp STTTTCCEEEEECCSSSCSSCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSSSCCSCCSBCEEEEEEBCCHHHHTSTT
T ss_pred CCCCCCEEEEEeCCcccccccCCCcEEEEECCCCCCCCCCCCEEEEEEccccCCCCCCCCchheEEEEeeeCHHHhCCcc
Confidence 469999999876 34556888888753 235789999998643211 1122223333223211
Q ss_pred cCC-ceeeeEEEEc-----ccCCCCCCCCeeecC-CC--eEEEEEeeccccCccccccccccHHHHHHHHHHHH
Q 009784 255 VHG-STELLGLQID-----AAINSGNSGGPAFND-KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYE 319 (526)
Q Consensus 255 ~~~-~~~~~~i~~d-----a~i~~G~SGGPlvn~-~G--~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l~ 319 (526)
..+ .....+++.. ...|.|+|||||+.. +| .++||++.+..-.....-+....+....+++++..
T Consensus 165 ~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~ 238 (248)
T 2r0l_A 165 VYGADISPNMLCAGYFDCKSDACQGDSGGPLACEKNGVAYLYGIISWGDGCGRLHKPGVYTRVANYVDWINDRI 238 (248)
T ss_dssp TTGGGCCTTEEEESCSSSCCBCCTTCTTCEEEEEETTEEEEEEEEEECSTTTCTTCCEEEEEGGGGHHHHHHHH
T ss_pred ccCCcCCCCEEeECCCCCCCcCCCCccCCeEEEEECCcEEEEEEEEeCCCCCCCCCCcEEEEHHHHHHHHHHHh
Confidence 011 1112346653 357899999999965 45 59999987653211122344455555566666554
No 94
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=99.31 E-value=3.7e-12 Score=108.60 Aligned_cols=101 Identities=14% Similarity=0.187 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHHHcCceeeccccCceeeeccChhHHhhhcCCCCccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecC
Q 009784 308 TPVIMHFIQDYEKNGAYTGFPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAN 386 (526)
Q Consensus 308 ~~~i~~~l~~l~~~g~~~~~~~LGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~ 386 (526)
.+.+.++.+++.+++... +.++|+...... ....|++|..+.|+|||++ ||++||+|++|||++|.+
T Consensus 4 ~~~~~~~~~~l~~~~~~~-~~~~g~~~~~~~-----------~~~~G~~V~~~~pas~A~~aGl~~GDvI~~ing~~v~~ 71 (105)
T 2i4s_A 4 EDKVDAIREAIARNPQEI-FQYVRLSQVKRD-----------DKVLGYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTD 71 (105)
T ss_dssp HHHHHHHHHHHHHSGGGH-HHHEEEEEEEET-----------TEEEEEEEEECSCTHHHHHHTCCTTCEEEEETTEETTS
T ss_pred hHHHHHHHHHHHHCHHHH-HhhceeEEEecC-----------CcEEEEEEecCCCCCHHHHcCCCCCCEEEEECCEECCC
Confidence 356888899999999888 888988765331 1125788888888888899 999999999999999999
Q ss_pred CCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEEEEEEEEe
Q 009784 387 DGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITL 430 (526)
Q Consensus 387 ~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~~~~~v~l 430 (526)
+.++. .++....+|++++|+|+|+|+.+++++++
T Consensus 72 ~~d~~----------~~~~~~~~g~~v~l~v~R~g~~~~~~v~l 105 (105)
T 2i4s_A 72 PNVMN----------TLFQSMNEMTEMSLTVERDGQQHDVYIQF 105 (105)
T ss_dssp TTHHH----------HHHHHHTTCSEEEEEEEETTEEEEEEEEC
T ss_pred HHHHH----------HHHHhcCCCCeEEEEEEECCEEEEEEEeC
Confidence 99864 56666678999999999999998887764
No 95
>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S 3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C*
Probab=99.30 E-value=2.6e-11 Score=117.53 Aligned_cols=187 Identities=17% Similarity=0.163 Sum_probs=112.7
Q ss_pred eeCCCCCCccccCCC--cceEEEEEEEeCCEEEecccccCCCCeEEEEEcC--------CCcEEEEEEEEecc-------
Q 009784 132 HTEPNFSLPWQRKRQ--YSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRG--------SDTKYLATVLAIGT------- 194 (526)
Q Consensus 132 ~~~~~~~~P~~~~~~--~~~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~--------~g~~~~a~vv~~d~------- 194 (526)
......++||+.... ....|+|.+|++.+|||+|||+.....+.|.+.. ....+..+-+..++
T Consensus 5 ~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~ 84 (235)
T 2wph_S 5 EDAKPGQFPWQVVLNGKVDAFCGGSIVNEKWIVTAAHCVETGVKITVVAGEHNIEETEHTEQKRNVIRIIPHHNFNAAIN 84 (235)
T ss_dssp EECCTTSSTTEEEEESSSTTCEEEEEEETTEEEECGGGCCTTSCCEEEESCCBTTSCCSCCEEEEEEEEEECTTTTSSSS
T ss_pred EECCCCCCCeEEEEccCCCeeEEEEEEeCCEEEECHHHCcCCCCEEEEEcccccCCCCCCcEEeeeEEEEeCCCCcccCC
Confidence 344556677766432 2457999999999999999999877777787642 12234444444443
Q ss_pred --CCCeEEEEecccc-cccCceeeecCCCC-----cCCCcEEEEeeCCCCC-------ceeEEEEEEeceeeeeccCCce
Q 009784 195 --ECDIAMLTVEDDE-FWEGVLPVEFGELP-----ALQDAVTVVGYPIGGD-------TISVTSGVVSRIEILSYVHGST 259 (526)
Q Consensus 195 --~~DlAlLkv~~~~-~~~~~~pl~l~~~~-----~~g~~V~~iG~p~~~~-------~~sv~~GiVs~~~~~~~~~~~~ 259 (526)
.+||||||++.+. +...+.|+.|.... ..+..+++.||..... ...+..-+++...+........
T Consensus 85 ~~~~DIALl~L~~~~~~~~~v~picL~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~ 164 (235)
T 2wph_S 85 TYNHDIALLELDEPLVLNSYVTPICIADKEYTNIFLKFGSGYVSGWGRVFHKGRSALVLQYLRVPLVDRATCLRSTKFTI 164 (235)
T ss_dssp CCTTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHHHTCEEEEEESSBSSTTSCBCSBCEEEEEEEECHHHHHHTCSSCC
T ss_pred cCCCCEEEEEECCcCcCCCCccccCCCCCcccccccCCccEEEEeCCCccCCCCccchheEeeeeeeCHHHhcCcccCCC
Confidence 3699999998763 34467888886532 1367889999864321 1123334444433322111111
Q ss_pred eeeEEEEc-----ccCCCCCCCCeeecC-CC--eEEEEEeeccccCccccccccccHHHHHHHHHHH
Q 009784 260 ELLGLQID-----AAINSGNSGGPAFND-KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDY 318 (526)
Q Consensus 260 ~~~~i~~d-----a~i~~G~SGGPlvn~-~G--~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l 318 (526)
...+++.. ...|.|+|||||+.. +| .++||++.+..-......+....+....+++++.
T Consensus 165 ~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~ 231 (235)
T 2wph_S 165 TNNMFCAGFHEGGRDSCQGDSGGPHVTEVEGTSFLTGIISWGEECAMKGKYGIYTKVSRYVNWIKEK 231 (235)
T ss_dssp CTTEEEESCTTCSCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHH
T ss_pred CCCEEEeCCCCCCCccCCCCCCCceEEeECCeEEEEEEEEECCCCCCCCCCeEEEEHHHhHHHHHHH
Confidence 22346653 357899999999864 45 5999998765322122234444455555565553
No 96
>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin membrane, disulfide bond, glycoprotein, hydrolase, membrane protease, secreted; 1.30A {Homo sapiens} PDB: 3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A 3dfl_A*
Probab=99.30 E-value=3.4e-11 Score=118.31 Aligned_cols=163 Identities=18% Similarity=0.130 Sum_probs=103.2
Q ss_pred eeCCCCCCccccCCC--cceEEEEEEEeCCEEEecccccCC---CCeEEEEEcC--------CCcEEEEEEEEeccC---
Q 009784 132 HTEPNFSLPWQRKRQ--YSSSSSGFAIGGRRVLTNAHSVEH---YTQVKLKKRG--------SDTKYLATVLAIGTE--- 195 (526)
Q Consensus 132 ~~~~~~~~P~~~~~~--~~~~GSGfvI~~g~ILT~aHvV~~---~~~i~V~~~~--------~g~~~~a~vv~~d~~--- 195 (526)
......++||+.... ....|+|.+|++.||||+|||+.+ ...+.|.+.. +...+..+-+..++.
T Consensus 5 ~~a~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAhC~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i~~hp~y~~ 84 (261)
T 3gyl_B 5 SSAVAGQWPWQVSITYEGVHVCGGSLVSEQWVLSAAHCFPSEHHKEAYEVKLGAHQLDSYSEDAKVSTLKDIIPHPSYLQ 84 (261)
T ss_dssp EECCTTSSTTEEEEEETTEEEEEEEECSSSEEEECGGGSCTTSCGGGEEEEESCSBTTSCCSSCEEECEEEEEECTTCCS
T ss_pred cCCCCCCCCcEEEEeeCCceEEEEEEEcCCEEEECHHHCCCCCCcccEEEEeCceeccCCCCCceEEEEEEEEECCCcCC
Confidence 344556677766432 346799999999999999999963 2456777641 122444555556654
Q ss_pred ----CCeEEEEecccc-cccCceeeecCCCC---cCCCcEEEEeeCCCCC---------ceeEEEEEEeceeeeeccC--
Q 009784 196 ----CDIAMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGD---------TISVTSGVVSRIEILSYVH-- 256 (526)
Q Consensus 196 ----~DlAlLkv~~~~-~~~~~~pl~l~~~~---~~g~~V~~iG~p~~~~---------~~sv~~GiVs~~~~~~~~~-- 256 (526)
+||||||++.+. +...+.|+.|.... ..+..+++.||..... ...+...+++...+.....
T Consensus 85 ~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~ 164 (261)
T 3gyl_B 85 EGSQGDIALLQLSRPITFSRYIRPISLPAAQASFPNGLHCTVTGWGHVAPSVSLLTPKPLQQLEVPLISRETCNSLYNID 164 (261)
T ss_dssp TTCSCCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESSCSBTTBCCCTTCBCEEEEEEEECHHHHHHHHTTT
T ss_pred CCCCCcEEEEEECCCccCCCceeccCCCCcccCCCCCCEEEEEecCCCCCCCCccCCccceEEEEEEECHHHhhhhhccc
Confidence 599999998763 44568888886432 3578899999864321 1234444555443322111
Q ss_pred ------CceeeeEEEEc-----ccCCCCCCCCeeecC-CC--eEEEEEeecc
Q 009784 257 ------GSTELLGLQID-----AAINSGNSGGPAFND-KG--KCVGIAFQSL 294 (526)
Q Consensus 257 ------~~~~~~~i~~d-----a~i~~G~SGGPlvn~-~G--~VVGI~~~~~ 294 (526)
......++++. ...|.|+|||||+.. +| .++||++.+.
T Consensus 165 ~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~lvGI~S~g~ 216 (261)
T 3gyl_B 165 AKPEEPHFVQEDMVCAGYVEGGKDACQGDSGGPLSCPVEGLWYLTGIVSWGD 216 (261)
T ss_dssp CCTTCCCCCCTTEEEESCSSSSCBCCTTTTTCEEEEEETTEEEEEEEECCCC
T ss_pred ccccccccccCCeEeeCCCCCCCccCCCCCCCeeEEEeCCEEEEEEEEecCC
Confidence 11112246653 357899999999865 45 5999998764
No 97
>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease, zymogen; 2.50A {Mus musculus} SCOP: b.47.1.2 PDB: 3g01_A
Probab=99.29 E-value=5.4e-11 Score=114.45 Aligned_cols=167 Identities=16% Similarity=0.130 Sum_probs=101.8
Q ss_pred ceEEEEEEEeCCEEEecccccCCCCeEEEEEcC--------CCcEEEEEEEEeccC-------CCeEEEEecccc-cccC
Q 009784 148 SSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRG--------SDTKYLATVLAIGTE-------CDIAMLTVEDDE-FWEG 211 (526)
Q Consensus 148 ~~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~--------~g~~~~a~vv~~d~~-------~DlAlLkv~~~~-~~~~ 211 (526)
...|+|.+|++.||||+|||+. ..+.|.+.. ..+.+..+-+..++. +||||||++.+. +...
T Consensus 27 ~~~CgGtLI~~~~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~L~~~~~~~~~ 104 (227)
T 3fzz_A 27 KMFCGGFLVRDKFVLTAAHCKG--RSMTVTLGAHNIKAKEETQQIIPVAKAIPHPDYNPDDRSNDIMLLKLVRNAKRTRA 104 (227)
T ss_dssp EEEEEEEEEETTEEEECTTCCC--EEEEEEESCSBTTSCCTTCEEEEEEEEEECTTCBTTTTBTCCEEEEESSCCCCBTT
T ss_pred eeEEEEEEEeCCEEEECcccCC--CCcEEEEcccccCCCCCCceEEEEEEEEECcCCCCCCCcCCEEEEEECCcCCCCCc
Confidence 4679999999999999999985 456666531 123455555556654 699999998763 3456
Q ss_pred ceeeecCCCC---cCCCcEEEEeeCCCCCc-------eeEEEEEEeceeeee-ccCCceeeeEEEEc-----ccCCCCCC
Q 009784 212 VLPVEFGELP---ALQDAVTVVGYPIGGDT-------ISVTSGVVSRIEILS-YVHGSTELLGLQID-----AAINSGNS 275 (526)
Q Consensus 212 ~~pl~l~~~~---~~g~~V~~iG~p~~~~~-------~sv~~GiVs~~~~~~-~~~~~~~~~~i~~d-----a~i~~G~S 275 (526)
+.|+.|.... ..++.+++.||...... ..+..-+++...+.. +.........++.. ...+.|+|
T Consensus 105 v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDs 184 (227)
T 3fzz_A 105 VRPLNLPRRNAHVKPGDECYVAGWGKVTPDGEFPKTLHEVKLTVQKDQVCESQFQSSYNRANEICVGDSKIKGASFEEDS 184 (227)
T ss_dssp BCCCCCCCTTCCCCTTCEEEEEESSCSSTTSCCCSBCEEEEEEBCCHHHHHHHHTTTCCTTTEEEECCCSSCBCCTTTTT
T ss_pred ccccCCCCcccCCCCCCEEEEEECCcccCCCCCCCeeeEEEeeeecHHHhhhhhccccCCCceEEEeCCCCCCcccccCC
Confidence 7888886433 45789999999642211 122233333222221 11111111245542 35789999
Q ss_pred CCeeecCCCeEEEEEeeccccCccccccccccHHHHHHHHHHHH
Q 009784 276 GGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYE 319 (526)
Q Consensus 276 GGPlvn~~G~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l~ 319 (526)
||||+. ++.++||++.+.... ..-+....+...++++++..
T Consensus 185 GgPl~~-~~~l~Gi~S~g~~c~--~~p~vyt~V~~~~~WI~~~i 225 (227)
T 3fzz_A 185 GGPLVC-KRAAAGIVSYGQTDG--SAPQVFTRVLSFVSWIKKTM 225 (227)
T ss_dssp TCEEEE-TTEEEEEEEECCTTC--SSSEEEEEGGGTHHHHHHHH
T ss_pred ccceEE-ecCCcEEEEECCCCC--CCCeEEEEhHHhHHHHHHHH
Confidence 999997 579999998765321 12334444555555555543
No 98
>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation, fibrinolysis, plasminogen activation; HET: ABV; 1.45A {Homo sapiens} SCOP: b.47.1.2 PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U* 1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U* 2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U* 1vj9_U* 1sc8_U* ...
Probab=99.29 E-value=4.2e-11 Score=116.54 Aligned_cols=171 Identities=15% Similarity=0.191 Sum_probs=102.5
Q ss_pred ceEEEEEEEeCCEEEecccccCCC---CeEEEEEcC--------CCcEEEEEEEEeccC---------CCeEEEEeccc-
Q 009784 148 SSSSSGFAIGGRRVLTNAHSVEHY---TQVKLKKRG--------SDTKYLATVLAIGTE---------CDIAMLTVEDD- 206 (526)
Q Consensus 148 ~~~GSGfvI~~g~ILT~aHvV~~~---~~i~V~~~~--------~g~~~~a~vv~~d~~---------~DlAlLkv~~~- 206 (526)
...|+|.+|++.||||+|||+.+. ..+.|.+.. .+..+..+-+..++. +||||||++.+
T Consensus 28 ~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DIALl~L~~~~ 107 (247)
T 3mhw_U 28 TYVCGGSLISPCWVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKE 107 (247)
T ss_dssp EEEEEEEEEETTEEEECGGGTTTSCCGGGEEEEESCCBSSSCCTTCEEEEEEEEEECTTCEEC-CCEESCCEEEEEECTT
T ss_pred ceEEEEEEEeCCEEEEcHHhCcCCCCCccEEEEeccccccCCCCCCEEEEEEEEEECCCCCCCcCCCCCcEEEEEeCCcc
Confidence 357999999999999999999753 346776631 123455554555543 59999999875
Q ss_pred ----ccccCceeeecCCC---CcCCCcEEEEeeCCCCC--------ceeEEEEEEeceeeeecc-C-CceeeeEEEEc--
Q 009784 207 ----EFWEGVLPVEFGEL---PALQDAVTVVGYPIGGD--------TISVTSGVVSRIEILSYV-H-GSTELLGLQID-- 267 (526)
Q Consensus 207 ----~~~~~~~pl~l~~~---~~~g~~V~~iG~p~~~~--------~~sv~~GiVs~~~~~~~~-~-~~~~~~~i~~d-- 267 (526)
.+...+.|+.|... ...++.+++.||..... ...+..-+++...+.... . ......+++..
T Consensus 108 ~~~~~~~~~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~ 187 (247)
T 3mhw_U 108 GRCAQPSRTIQTISLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKLISHRECQQPHYYGSEVTTKMLCAADP 187 (247)
T ss_dssp SCCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSTTCSSCCSBCEEEEEEEECHHHHTSTTTTGGGCCTTEEEEECT
T ss_pred ccccccCCcccccccCCCcCCCCCCCEEEEEecCCcCCCCcccchhheeeEEEEEChHHhcCccccCCcCCCCeEecCCC
Confidence 23456788887642 34578899999865321 112333444433332210 1 11112245553
Q ss_pred ---ccCCCCCCCCeeecC-CC--eEEEEEeeccccCccccccccccHHHHHHHHHHH
Q 009784 268 ---AAINSGNSGGPAFND-KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDY 318 (526)
Q Consensus 268 ---a~i~~G~SGGPlvn~-~G--~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l 318 (526)
...|.|+|||||+.. +| .++||++.+..-.....-+....+...++++++.
T Consensus 188 ~~~~~~C~GDSGgPl~~~~~~~~~l~Gi~S~g~~c~~~~~p~vyt~V~~~~~WI~~~ 244 (247)
T 3mhw_U 188 QWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWIRSH 244 (247)
T ss_dssp TSCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSBTTBCEEEEEGGGCHHHHHHH
T ss_pred CCCCccCCCCCCCeEEEEECCCEEEEEEEEECCCCCCCCCCeEEEEHHHHHHHHHHH
Confidence 367899999999864 44 5999998764322122233444444455555543
No 99
>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood coagulation, BLOO clotting, convertion of fibrinogen to fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB: 1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H* 1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H* 1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ...
Probab=99.29 E-value=3.9e-11 Score=117.52 Aligned_cols=187 Identities=18% Similarity=0.130 Sum_probs=106.6
Q ss_pred eeCCCCCCccccCCC----cceEEEEEEEeCCEEEecccccC--------CCCeEEEEEcCC---------CcEEEEEEE
Q 009784 132 HTEPNFSLPWQRKRQ----YSSSSSGFAIGGRRVLTNAHSVE--------HYTQVKLKKRGS---------DTKYLATVL 190 (526)
Q Consensus 132 ~~~~~~~~P~~~~~~----~~~~GSGfvI~~g~ILT~aHvV~--------~~~~i~V~~~~~---------g~~~~a~vv 190 (526)
......++||+.... ....|+|.+|++.+|||+|||+. ....+.|.+... .+....+-+
T Consensus 5 ~~a~~~~~Pw~v~l~~~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~v~~i 84 (259)
T 3rm2_H 5 SDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKI 84 (259)
T ss_dssp EECCTTSSTTEEEEEEETTEEEEEEEEECSSSEEEECGGGTEEGGGTEECCGGGEEEEESCCBSSSCCTTTCEEEEEEEE
T ss_pred EECCCCCcCCEEEEEECCCCceEEEEEEEeCCEEEEcHHhCcccccccccCcccEEEEECcccccccccCcceeeEEEEE
Confidence 334455667765431 23579999999999999999994 234567776421 112223434
Q ss_pred Eecc--------CCCeEEEEecccc-cccCceeeecCCCC------cCCCcEEEEeeCCCCCc-------------eeEE
Q 009784 191 AIGT--------ECDIAMLTVEDDE-FWEGVLPVEFGELP------ALQDAVTVVGYPIGGDT-------------ISVT 242 (526)
Q Consensus 191 ~~d~--------~~DlAlLkv~~~~-~~~~~~pl~l~~~~------~~g~~V~~iG~p~~~~~-------------~sv~ 242 (526)
..++ .+||||||++.+. +...+.|+.|.... ..+..+.+.||...... ..+.
T Consensus 85 ~~hp~y~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~~~~~~l~~~~ 164 (259)
T 3rm2_H 85 YIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVN 164 (259)
T ss_dssp EECTTCBTTTTCBTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHCCTTCEEEEEESCCSSCC-------CCCSBCEEEE
T ss_pred EECCCCCCCCCCCCcEEEEEeCCceEcCCCcccccCCCccccccccCCCCEEEEeecCCCcCcCCccccccccccceEEE
Confidence 4443 3599999998763 44568888886532 34788999998753211 1122
Q ss_pred EEEEeceeeeeccCCceeeeEEEEc--------ccCCCCCCCCeeecC---CC--eEEEEEeeccccCccccccccccHH
Q 009784 243 SGVVSRIEILSYVHGSTELLGLQID--------AAINSGNSGGPAFND---KG--KCVGIAFQSLKHEDVENIGYVIPTP 309 (526)
Q Consensus 243 ~GiVs~~~~~~~~~~~~~~~~i~~d--------a~i~~G~SGGPlvn~---~G--~VVGI~~~~~~~~~~~~~~~aIP~~ 309 (526)
.-+++...+...........+++.. ...|.|+|||||+.. +| .++||++.+..-......+...-+.
T Consensus 165 ~~~~~~~~C~~~~~~~~~~~~~Cag~~~~~~~~~~~C~GDsGgPL~~~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~ 244 (259)
T 3rm2_H 165 LPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVF 244 (259)
T ss_dssp EEBCCHHHHHHTCSSCCCTTEEEECCCGGGSCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSCTTCCEEEEETG
T ss_pred EEEeCHHHhhhhhcccCCCceEeeeccCCCCCCCcccCCCCCCeeEEEECCCCCEEEEEEEEECCCCCCCCCCeEEEEHH
Confidence 2222222222111111122356653 268899999999864 23 6999998765322212223334444
Q ss_pred HHHHHHHHH
Q 009784 310 VIMHFIQDY 318 (526)
Q Consensus 310 ~i~~~l~~l 318 (526)
..++++++.
T Consensus 245 ~~~~WI~~~ 253 (259)
T 3rm2_H 245 RLKKWIQKV 253 (259)
T ss_dssp GGHHHHHHH
T ss_pred HhHHHHHHH
Confidence 444444443
No 100
>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease, fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens} SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A*
Probab=99.29 E-value=7.1e-11 Score=115.58 Aligned_cols=170 Identities=18% Similarity=0.158 Sum_probs=102.9
Q ss_pred ceEEEEEEEeCCEEEecccccCCC---CeEEEEEcC--------CCcEEEEEEEEecc-------CCCeEEEEeccc---
Q 009784 148 SSSSSGFAIGGRRVLTNAHSVEHY---TQVKLKKRG--------SDTKYLATVLAIGT-------ECDIAMLTVEDD--- 206 (526)
Q Consensus 148 ~~~GSGfvI~~g~ILT~aHvV~~~---~~i~V~~~~--------~g~~~~a~vv~~d~-------~~DlAlLkv~~~--- 206 (526)
...|+|.+|++.+|||+|||+.+. ..+.|.+.. +...+..+-+..++ .+||||||++.+
T Consensus 29 ~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~ 108 (252)
T 1rtf_B 29 RFLCGGILISSCWILSAAHCFQERFPPHHLTVILGRTYRVVPGEEEQKFEVEKYIVHKEFDDDTYDNDIALLQLKSDSSR 108 (252)
T ss_dssp EEEEEEEECSSSEEEECGGGGTTCCCGGGEEEEESCSBSSSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEECCSSSC
T ss_pred CEEEEEEEEeCCEEEECHHHCCCCCCcccEEEEeCcccccCCCCcceEEEEEEEEeCCCCCcCCCCCCEEEEEECCcccc
Confidence 358999999999999999999753 457777642 12345555455554 369999999876
Q ss_pred --ccccCceeeecCCCC---cCCCcEEEEeeCCCCC--------ceeEEEEEEeceeeeecc--CCceeeeEEEEc----
Q 009784 207 --EFWEGVLPVEFGELP---ALQDAVTVVGYPIGGD--------TISVTSGVVSRIEILSYV--HGSTELLGLQID---- 267 (526)
Q Consensus 207 --~~~~~~~pl~l~~~~---~~g~~V~~iG~p~~~~--------~~sv~~GiVs~~~~~~~~--~~~~~~~~i~~d---- 267 (526)
.+...+.|+.|.... ..+..+++.||..... ...+..-+++...+.... .......+++..
T Consensus 109 ~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~ 188 (252)
T 1rtf_B 109 CAQESSVVRTVCLPPADLQLPDWTECELSGYGKHEALSPFYSERLKEAHVRLYPSSRCTSQHLLNRTVTDNMLCAGDTRS 188 (252)
T ss_dssp CSCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSTTCSSCCSBCEEEEEEECCGGGSSTTTTTTCCCCTTEEEEECCC-
T ss_pred ccccCCceeceeCCCccccCCCCCEEEEEEcCCCCCCCccccchheEeeeEEecHHHhhhhhccCCCCCCCEEEecCCCC
Confidence 234567888886532 3468899999864321 112333444443332211 111112245542
Q ss_pred -------ccCCCCCCCCeeecC-CC--eEEEEEeeccccCccccccccccHHHHHHHHHH
Q 009784 268 -------AAINSGNSGGPAFND-KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQD 317 (526)
Q Consensus 268 -------a~i~~G~SGGPlvn~-~G--~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~ 317 (526)
...|.|+|||||+.. +| .++||++.+..-.....-+...-+...++++++
T Consensus 189 ~~~~~~~~~~C~GDsGgPL~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~y~~WI~~ 248 (252)
T 1rtf_B 189 GGPQANLHDACQGDSGGPLVCLNDGRMTLVGIISWGLGCGQKDVPGVYTKVTNYLDWIRD 248 (252)
T ss_dssp -----CCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHH
T ss_pred CCccCCCCccccCCCcCceEEEeCCcEEEEEEEEEcCCCCCCCCCeEEEEHHHHHHHHHH
Confidence 357899999999864 45 699999876532111222334444445555554
No 101
>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2 PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H 1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H* 1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H* ...
Probab=99.29 E-value=4e-11 Score=117.71 Aligned_cols=190 Identities=17% Similarity=0.184 Sum_probs=115.4
Q ss_pred eeeCCCCCCccccCCC--cceEEEEEEEeCCEEEecccccCCCC---eEEEEEcC--------CCcEEEEEEEEecc---
Q 009784 131 VHTEPNFSLPWQRKRQ--YSSSSSGFAIGGRRVLTNAHSVEHYT---QVKLKKRG--------SDTKYLATVLAIGT--- 194 (526)
Q Consensus 131 ~~~~~~~~~P~~~~~~--~~~~GSGfvI~~g~ILT~aHvV~~~~---~i~V~~~~--------~g~~~~a~vv~~d~--- 194 (526)
+......++||+.... ....|+|.+|++.||||+|||+.+.. .+.|.+.. +.+.+..+-+..++
T Consensus 4 G~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~ 83 (254)
T 2bz6_H 4 GKVCPKGECPWQVLLLVNGAQLCGGTLINTIWVVSAAHCFDKIKNWRNLIAVLGEHDLSEHDGDEQSRRVAQVIIPSTYV 83 (254)
T ss_dssp CEECCTTSSTTEEEEEETTEEEEEEEECSSSEEEECGGGGTTCSCGGGEEEEESCCBTTCCCSCCEEEEEEEEEEETTCC
T ss_pred CEECCCCCcCCEEEEEeCCCcEEEEEEecCCEEEECHHHcCCCCCcceEEEEECCcccCCCCCCcEEEEEEEEEECCCCC
Confidence 3344556677766432 23579999999999999999998654 37777642 12344554455554
Q ss_pred ----CCCeEEEEecccc-cccCceeeecCCCC------cCCCcEEEEeeCCCCC-------ceeEEEEEEeceeeeeccC
Q 009784 195 ----ECDIAMLTVEDDE-FWEGVLPVEFGELP------ALQDAVTVVGYPIGGD-------TISVTSGVVSRIEILSYVH 256 (526)
Q Consensus 195 ----~~DlAlLkv~~~~-~~~~~~pl~l~~~~------~~g~~V~~iG~p~~~~-------~~sv~~GiVs~~~~~~~~~ 256 (526)
.+||||||++.+. +.+.+.|+.|.... ..++.+++.||..... ...+..-+++...+.....
T Consensus 84 ~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~ 163 (254)
T 2bz6_H 84 PGTTNHDIALLRLHQPVVLTDHVVPLCLPERTFSERTLAFVRFSLVSGWGQLLDRGATALELMVLNVPRLMTQDCLQQSR 163 (254)
T ss_dssp TTSCSSCCEEEEESSCCCCBTTBCCCBCCCHHHHHHTGGGCCEEEEEESCBSSTTSCBCSBCEEEEEEEECHHHHHHHSC
T ss_pred CCCCcCcEEEEEECCccccCCCccceECCCCccccccccCCCcEEEEeCcccCCCCCCChhheeeeeeeecHHHHhhhhh
Confidence 3699999998763 44568888886532 2478889999864321 1123333444333321111
Q ss_pred C-----ceeeeEEEEc-----ccCCCCCCCCeeecC-CC--eEEEEEeeccccCccccccccccHHHHHHHHHHHHH
Q 009784 257 G-----STELLGLQID-----AAINSGNSGGPAFND-KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEK 320 (526)
Q Consensus 257 ~-----~~~~~~i~~d-----a~i~~G~SGGPlvn~-~G--~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 320 (526)
. .....++++. ...|.|+|||||+.. +| .++||++.+..-......+...-+....+++++..+
T Consensus 164 ~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPl~~~~~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~~ 240 (254)
T 2bz6_H 164 KVGDSPNITEYMFCAGYSDGSKDSCKGDSGGPHATHYRGTWYLTGIVSWGQGCATVGHFGVYTRVSQYIEWLQKLMR 240 (254)
T ss_dssp CCTTCCCCCTTEEEESCSSSSCBCCGGGTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHHT
T ss_pred ccccCCccCCCEEeecCCCCCCccccccCCCceEEeECCEEEEEEEEEECCCCCCCCCCeEEEEHHHHHHHHHHHHh
Confidence 1 1112356653 357899999999864 45 599999876532211223444555566677766654
No 102
>2bdy_A Thrombin; thrombin, complex structure, hydrolase, hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E* 1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A* 1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A* 1zgi_A* 1zgv_A* 1zrb_A* ...
Probab=99.28 E-value=4.7e-11 Score=119.76 Aligned_cols=193 Identities=17% Similarity=0.118 Sum_probs=115.0
Q ss_pred EEEeeeeCCCCCCccccCCC----cceEEEEEEEeCCEEEecccccCC--------CCeEEEEEcCC---------CcEE
Q 009784 127 KVFCVHTEPNFSLPWQRKRQ----YSSSSSGFAIGGRRVLTNAHSVEH--------YTQVKLKKRGS---------DTKY 185 (526)
Q Consensus 127 ~I~~~~~~~~~~~P~~~~~~----~~~~GSGfvI~~g~ILT~aHvV~~--------~~~i~V~~~~~---------g~~~ 185 (526)
+|..........+||+.... ....|+|.+|++.||||+|||+.. ...+.|++... .+.+
T Consensus 30 rIvgG~~a~~~~~Pw~v~l~~~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~ 109 (289)
T 2bdy_A 30 RIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKIS 109 (289)
T ss_dssp -CBSCEECCTTSCTTEEEEEETTTTEEEEEEEECSSSEEEECGGGTEEGGGTEECCGGGEEEEESCCBSSSCCTTTCEEE
T ss_pred eEECCEECCCCCCCCeEEEEECCCCCEEEEEEEecCCEEEEcHHhcccCccccccCcccEEEEEccccccccCCCcceee
Confidence 67777777888899987542 346899999999999999999942 34577776421 1223
Q ss_pred EEEEEEecc--------CCCeEEEEecccc-cccCceeeecCCCC------cCCCcEEEEeeCCCCCc------------
Q 009784 186 LATVLAIGT--------ECDIAMLTVEDDE-FWEGVLPVEFGELP------ALQDAVTVVGYPIGGDT------------ 238 (526)
Q Consensus 186 ~a~vv~~d~--------~~DlAlLkv~~~~-~~~~~~pl~l~~~~------~~g~~V~~iG~p~~~~~------------ 238 (526)
..+-+..++ .+||||||++.+. +.+.+.|+.|.... ..|..+++.||......
T Consensus 110 ~v~~i~~Hp~y~~~~~~~~DIALl~L~~pv~~~~~v~picLp~~~~~~~~~~~g~~~~v~GWG~~~~~~~~~~~~~~~~~ 189 (289)
T 2bdy_A 110 MLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSV 189 (289)
T ss_dssp EEEEEEECTTCBTTTTCBTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHCCTTCEEEEEESSCSSCC-------CCCSB
T ss_pred eeEEEEECCCCCCCCCCCCeEEEEEECCccccCCcccccCCCCccccccccCCCCEEEEECCCcCCCccccCcccccccc
Confidence 344344443 3699999999763 44568888887532 35788999998653211
Q ss_pred -eeEEEEEEeceeeeeccCCceeeeEEEEc--------ccCCCCCCCCeeecC---CC--eEEEEEeeccccCccccccc
Q 009784 239 -ISVTSGVVSRIEILSYVHGSTELLGLQID--------AAINSGNSGGPAFND---KG--KCVGIAFQSLKHEDVENIGY 304 (526)
Q Consensus 239 -~sv~~GiVs~~~~~~~~~~~~~~~~i~~d--------a~i~~G~SGGPlvn~---~G--~VVGI~~~~~~~~~~~~~~~ 304 (526)
..+..-+++...+...........+|+.. ...|.|+|||||+.. +| .++||++.+..-.....-+.
T Consensus 190 L~~~~v~i~~~~~C~~~~~~~i~~~~iCag~~~~~~~~~~~C~GDSGGPLv~~~~~~~~~~l~GIvS~g~~C~~~~~p~v 269 (289)
T 2bdy_A 190 LQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGF 269 (289)
T ss_dssp CEEEEEEBCCHHHHHHTCSSCCCTTEEEECCCGGGCCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSCTTCCEE
T ss_pred ceEEEEEEECHHHhhccccCcCCCCEEeccCCCCCCCCCccCCCCCccceEEEECCCCCEEEEEEEEECCCCCCCCCCEE
Confidence 11222233322222111111112356662 357899999999854 34 59999987653221122233
Q ss_pred cccHHHHHHHHHHHH
Q 009784 305 VIPTPVIMHFIQDYE 319 (526)
Q Consensus 305 aIP~~~i~~~l~~l~ 319 (526)
..-+....++|++..
T Consensus 270 yt~V~~y~~WI~~~i 284 (289)
T 2bdy_A 270 YTHVFRLKKWIQKVI 284 (289)
T ss_dssp EEETGGGHHHHHHHH
T ss_pred EEEHHHHHHHHHHHH
Confidence 444444555555543
No 103
>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase; HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP: b.47.1.2 PDB: 1fiz_A*
Probab=99.28 E-value=9.9e-11 Score=117.60 Aligned_cols=187 Identities=17% Similarity=0.167 Sum_probs=109.8
Q ss_pred eeCCCCCCccccCCC--------cceEEEEEEEeCCEEEecccccCCC---CeEEEEEcCC-------------CcEEEE
Q 009784 132 HTEPNFSLPWQRKRQ--------YSSSSSGFAIGGRRVLTNAHSVEHY---TQVKLKKRGS-------------DTKYLA 187 (526)
Q Consensus 132 ~~~~~~~~P~~~~~~--------~~~~GSGfvI~~g~ILT~aHvV~~~---~~i~V~~~~~-------------g~~~~a 187 (526)
......++||+.... ....|+|.+|++.||||+|||+.+. ..+.|.+... .+.+..
T Consensus 5 ~~a~~~~~Pw~v~l~~~~~~~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~~~~V 84 (290)
T 1fiw_A 5 QDAAHGAWPWMVSLQIFTYHNNRRYHVCGGSLLNSQWLLTAAHCFRIKKKVTDWRLIFGAKEVEWGTNKPVKPPLQERYV 84 (290)
T ss_dssp EECCTTSSTTEEEEEEEETTTTEEEEEEEEEEEETTEEEECGGGGSSCCSGGGEEEEESCSBCCTTCCSCCCTTCEEEEE
T ss_pred EECCCCCCCcEEEEEEeccCCCccceEEEEEEeeCCEEEECHHhCCCCCCCcceEEEecceEEeccCCCcCCCCceEEEE
Confidence 344455677765432 1357999999999999999999753 3466765310 123344
Q ss_pred EEEEecc-------CCCeEEEEecccc-cccCceeeecCCC----CcCCCcEEEEeeCCCCC--------ceeEEEEEEe
Q 009784 188 TVLAIGT-------ECDIAMLTVEDDE-FWEGVLPVEFGEL----PALQDAVTVVGYPIGGD--------TISVTSGVVS 247 (526)
Q Consensus 188 ~vv~~d~-------~~DlAlLkv~~~~-~~~~~~pl~l~~~----~~~g~~V~~iG~p~~~~--------~~sv~~GiVs 247 (526)
+-+..++ .+||||||++.+. +.+.+.|+.|... +..++.+++.||..... ...+..-+++
T Consensus 85 ~~i~~Hp~y~~~~~~nDIALl~L~~~v~~~~~v~PicLp~~~~~~~~~~~~~~v~GWG~~~~~~~~~~~~L~~~~v~i~~ 164 (290)
T 1fiw_A 85 EKIIIHEKYSASSEANDIALMKITPPVTCGHFIGPGCLPQFRAGPPRVPQTCWVAGWGFLQENARRTSPMLQEARVDLID 164 (290)
T ss_dssp EEEEECTTCBTTTTBTCCEEEEEESCCCCBTTBCCCBCCCTTCCSCCSSCEEEEEESCCSSTTCSSCCSBCEEEEEEEEC
T ss_pred EEEEECCCCCCCCCCCCEEEEEECCccccCCccccccCCCccccCcCCCCeEEEEEeccCCCCCCCCCceeeEEEEEEec
Confidence 4444554 3699999998763 4456888888642 23578899999864321 1233444555
Q ss_pred ceeeeec--cCCceeeeEEEEc-----ccCCCCCCCCeeecCC---C--eEEEEEeeccccCccccccccccHHHHHHHH
Q 009784 248 RIEILSY--VHGSTELLGLQID-----AAINSGNSGGPAFNDK---G--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFI 315 (526)
Q Consensus 248 ~~~~~~~--~~~~~~~~~i~~d-----a~i~~G~SGGPlvn~~---G--~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l 315 (526)
...+... ........+|+.. ...|.|+|||||+..+ | .++||++.+..-.....-+...-+...+++|
T Consensus 165 ~~~C~~~~~~~~~i~~~~iCag~~~~~~~~C~GDSGGPLv~~~~~~~~~~l~GIvS~g~~C~~~~~p~vyt~V~~y~~WI 244 (290)
T 1fiw_A 165 LGLCNSTRWYNGRIRSTNVCAGYPEGKIDTCQGDSGGPLMCKDSAENSYVVVGITSWGVGCARAKRPGVYTSTWSYLNWI 244 (290)
T ss_dssp HHHHTSTTTTTTCCCTTEEEEECTTCSSBCCTTCTTCEEEEECSSSSCEEEEEEEEECSSSSBTTBCEEEEESGGGHHHH
T ss_pred HHHhccccccCCcCCCCEEEEecCCCCCeeCCCCCchheEEEECCCCCEEEEEEEEECCCCCCCCCCeEEEEHHHhHHHH
Confidence 4434321 1111122346653 3678999999998643 3 6999998764321111223333333444555
Q ss_pred HHH
Q 009784 316 QDY 318 (526)
Q Consensus 316 ~~l 318 (526)
++.
T Consensus 245 ~~~ 247 (290)
T 1fiw_A 245 ASK 247 (290)
T ss_dssp HHH
T ss_pred HHH
Confidence 444
No 104
>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB: 1ybw_A 2r0k_A
Probab=99.27 E-value=5.9e-11 Score=118.60 Aligned_cols=193 Identities=17% Similarity=0.139 Sum_probs=116.4
Q ss_pred EEEeeeeCCCCCCccccCCCc-ceEEEEEEEeCCEEEecccccCCC---CeEEEEEcCC--------CcEEEEEEEEecc
Q 009784 127 KVFCVHTEPNFSLPWQRKRQY-SSSSSGFAIGGRRVLTNAHSVEHY---TQVKLKKRGS--------DTKYLATVLAIGT 194 (526)
Q Consensus 127 ~I~~~~~~~~~~~P~~~~~~~-~~~GSGfvI~~g~ILT~aHvV~~~---~~i~V~~~~~--------g~~~~a~vv~~d~ 194 (526)
+|..+......++||+..... ...|+|.+|++.||||+|||+.+. ..+.|.+... ...+..+-+..++
T Consensus 35 rIvgG~~a~~~~~Pw~v~l~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~hp 114 (283)
T 1yc0_A 35 RIIGGSSSLPGSHPWLAAIYIGDSFCAGSLVHTCWVVSAAHCFSHSPPRDSVSVVLGQHFFNRTTDVTQTFGIEKYIPYT 114 (283)
T ss_dssp -CBSCEECCTTSSTTEEEEEETTEEEEEEEEETTEEEECGGGGTTCCCGGGEEEEESCCBTTCCCSSCEEECEEEEEECT
T ss_pred ceECCeECCCCCCCeEEEEEcCCcEEEEEEeeCCEEEECHHHcCCCCCCceEEEEEeeeecccCCCceEEEeeEEEEecC
Confidence 455666666777888764422 367999999999999999999764 4577776421 2234444344333
Q ss_pred --------CCCeEEEEeccc-----ccccCceeeecCCC---CcCCCcEEEEeeCCCCC------c--eeEEEEEEecee
Q 009784 195 --------ECDIAMLTVEDD-----EFWEGVLPVEFGEL---PALQDAVTVVGYPIGGD------T--ISVTSGVVSRIE 250 (526)
Q Consensus 195 --------~~DlAlLkv~~~-----~~~~~~~pl~l~~~---~~~g~~V~~iG~p~~~~------~--~sv~~GiVs~~~ 250 (526)
.+||||||++.+ .+...+.|+.|... ...++.+++.||..... . ..+..-+++...
T Consensus 115 ~y~~~~~~~~DIALl~L~~~~~~~v~~~~~v~picLp~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~L~~~~v~i~~~~~ 194 (283)
T 1yc0_A 115 LYSVFNPSDHDLVLIRLKKKGDRCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENVSGYSSSLREALVPLVADHK 194 (283)
T ss_dssp TCCTTSTTTTCCEEEEECCBTTBSSCCBTTBCCCBCCCTTCCCCTTCEEEEEESSCSBTTBCSCCSBCEEEEEEBCCHHH
T ss_pred ccccCCCCCCceEEEEeCCCccccccccCceeeeECCCCcCCCCCCCEEEEEEeCccCCCCCccCchheEeEEEEECHHH
Confidence 469999999876 34556888888753 23578999999864321 1 112222333323
Q ss_pred eeec-cCC-ceeeeEEEEc-----ccCCCCCCCCeeecC-CC--eEEEEEeeccccCccccccccccHHHHHHHHHHHH
Q 009784 251 ILSY-VHG-STELLGLQID-----AAINSGNSGGPAFND-KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYE 319 (526)
Q Consensus 251 ~~~~-~~~-~~~~~~i~~d-----a~i~~G~SGGPlvn~-~G--~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l~ 319 (526)
+... ..+ .....+++.. ...|.|+|||||+.. +| .++||++.+..-.....-+....+....+++++..
T Consensus 195 C~~~~~~~~~~~~~~iCa~~~~~~~~~C~GDSGgPL~~~~~g~~~l~GIvS~g~~C~~~~~p~vyt~V~~y~~WI~~~i 273 (283)
T 1yc0_A 195 CSSPEVYGADISPNMLCAGYFDCKSDACQGDSGGPLACEKNGVAYLYGIISWGDGCGRLHKPGVYTRVANYVDWINDRI 273 (283)
T ss_dssp HTSTTTTGGGCCTTEEEESCSSSCCBCCTTCTTCEEEEEETTEEEEEEEEEECSTTTCTTCCEEEEEGGGGHHHHHHHC
T ss_pred hcCccccCCcCCCCEEeeCCCCCCCccCCCCCCCceEEEECCcEEEEEEEEECCCCCCCCCCeEEEEhhhHHHHHHHHh
Confidence 3211 011 1112356653 357899999999865 45 59999987653211122344445555566665543
No 105
>2jde_A Urokinase-type plasminogen activator; plasminogen activation, EGF-like domain, blood coagulation, inhibitor complex, UPA, kringle, zymogen; 2.2A {Homo sapiens} PDB: 2vnt_A*
Probab=99.27 E-value=6e-11 Score=117.81 Aligned_cols=192 Identities=15% Similarity=0.174 Sum_probs=114.7
Q ss_pred EEEeeeeCCCCCCccccCCC-----c--ceEEEEEEEeCCEEEecccccCCC---CeEEEEEcC--------CCcEEEEE
Q 009784 127 KVFCVHTEPNFSLPWQRKRQ-----Y--SSSSSGFAIGGRRVLTNAHSVEHY---TQVKLKKRG--------SDTKYLAT 188 (526)
Q Consensus 127 ~I~~~~~~~~~~~P~~~~~~-----~--~~~GSGfvI~~g~ILT~aHvV~~~---~~i~V~~~~--------~g~~~~a~ 188 (526)
+|.........++||+.... . ...|+|.+|++.||||+|||+.+. ..+.|.+.. .+..+..+
T Consensus 23 rIvgG~~a~~~~~Pw~v~l~~~~~~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~ 102 (276)
T 2jde_A 23 KIIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLMSPCWVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVE 102 (276)
T ss_dssp -CBSSEECCGGGSTTEEEEEEECCCCCEEEEEEEEEEETTEEEECGGGTTTSCCGGGEEEEESCCBSSSCCTTCEEEEEE
T ss_pred CeECCEECCCCCCCeEEEEEEecCCCccceeeeeEEeeCCEEEEcHHhccCCCCcccEEEEecccccCCCCCCcEEEEEE
Confidence 45555555666677765331 1 357999999999999999999753 346676632 12344555
Q ss_pred EEEeccC---------CCeEEEEeccc-----ccccCceeeecCCC---CcCCCcEEEEeeCCCCCc--------eeEEE
Q 009784 189 VLAIGTE---------CDIAMLTVEDD-----EFWEGVLPVEFGEL---PALQDAVTVVGYPIGGDT--------ISVTS 243 (526)
Q Consensus 189 vv~~d~~---------~DlAlLkv~~~-----~~~~~~~pl~l~~~---~~~g~~V~~iG~p~~~~~--------~sv~~ 243 (526)
-+..++. +||||||++.+ .+...+.|+.|... ...+..+++.||...... ..+..
T Consensus 103 ~i~~hp~y~~~~~~~~~DIALl~L~~~~~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~ 182 (276)
T 2jde_A 103 NLILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVV 182 (276)
T ss_dssp EEEECTTCEECSSCEESCCEEEEEECTTSCCCCCBTTBCCCBCCBTTBCCCTTCEEEEEESCCSSTTCSCCCSBCEEEEE
T ss_pred EEEECCCCCCCCCcCCCcEEEEEeCCccccccccCCceEccCCCCcccCCCCCCEEEEEECCccCCCCcccchhhhhcee
Confidence 4555543 59999999875 34456888888642 345788999998653211 12334
Q ss_pred EEEeceeeeecc-C-CceeeeEEEEc-----ccCCCCCCCCeeecC-CC--eEEEEEeeccccCccccccccccHHHHHH
Q 009784 244 GVVSRIEILSYV-H-GSTELLGLQID-----AAINSGNSGGPAFND-KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMH 313 (526)
Q Consensus 244 GiVs~~~~~~~~-~-~~~~~~~i~~d-----a~i~~G~SGGPlvn~-~G--~VVGI~~~~~~~~~~~~~~~aIP~~~i~~ 313 (526)
.+++...+.... . ......+++.. ...|.|+|||||+.. +| .++||++.+..-.....-+....+....+
T Consensus 183 ~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~ 262 (276)
T 2jde_A 183 KLISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLP 262 (276)
T ss_dssp EEECHHHHTSTTTTGGGSCTTEEEEECTTSCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHH
T ss_pred cccChHHhCcccccCccCCCCeEEecCCCCCCcccccccCcceEEEeCCcEEEEEEEEECCCCCCCCCCeEEEEHHHHHH
Confidence 444443332210 1 11112245553 367899999999864 44 49999987643221222344445555556
Q ss_pred HHHHH
Q 009784 314 FIQDY 318 (526)
Q Consensus 314 ~l~~l 318 (526)
+|++.
T Consensus 263 WI~~~ 267 (276)
T 2jde_A 263 WIRSH 267 (276)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 66554
No 106
>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine proteinase, C-terminal peptidase; 2.35A {Bos taurus} SCOP: b.47.1.2
Probab=99.27 E-value=4.4e-11 Score=117.31 Aligned_cols=147 Identities=15% Similarity=0.099 Sum_probs=93.8
Q ss_pred ceEEEEEEEeCCEEEecccccCCCCeEEEEEcCC---------CcEEEEEEEEecc-------CCCeEEEEecccc-ccc
Q 009784 148 SSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGS---------DTKYLATVLAIGT-------ECDIAMLTVEDDE-FWE 210 (526)
Q Consensus 148 ~~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~~---------g~~~~a~vv~~d~-------~~DlAlLkv~~~~-~~~ 210 (526)
...|+|.+|++.+|||+|||+.+...+.|.+... ...+..+-+..++ .+||||||++.+. +..
T Consensus 40 ~~~CgGtLIs~~~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~ 119 (251)
T 1pyt_D 40 RHTCGGTLITPNHVLTAAHCISNTLTYRVALGKNNLEVEDEAGSLYVGVDTIFVHEKWNSFLVRNDIALIKLAETVELGD 119 (251)
T ss_dssp EEEEEEEEEETTEEEECGGGCCTTCCEEEEESCSBTTCSCCSSCEEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCCCS
T ss_pred ceEEEeEEecCCEEEECHHHhCCCceEEEEEcccccccCCCCCcEEEEEEEEEECCCCCCCCCCCCEEEEEECCCcccCC
Confidence 3579999999999999999999877888887421 1234444455554 4699999998763 445
Q ss_pred CceeeecCCCC---cCCCcEEEEeeCCCCCc-------eeEEEEEEeceeeeecc--CCceeeeEEEEc----ccCCCCC
Q 009784 211 GVLPVEFGELP---ALQDAVTVVGYPIGGDT-------ISVTSGVVSRIEILSYV--HGSTELLGLQID----AAINSGN 274 (526)
Q Consensus 211 ~~~pl~l~~~~---~~g~~V~~iG~p~~~~~-------~sv~~GiVs~~~~~~~~--~~~~~~~~i~~d----a~i~~G~ 274 (526)
.+.|+.|.... ..+..+++.||...... ..+..-+++...+.... .......+++.. ...|.|+
T Consensus 120 ~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~C~GD 199 (251)
T 1pyt_D 120 TIQVACLPSEGSLLPQDYPCFVTGWGRLYTNGPIAAELQQGLQPVVDYATCSQRDWWGTTVKETMVCAGGDGVISACNGD 199 (251)
T ss_dssp SCCCCBCCCTTCCCCTTCEEEECBCCCSSCCSCCCSBCBCCEEECBCHHHHTSTTTTTTTCCTTEEEECCSCSSCCCCSC
T ss_pred CeeeeEcCCCcccCCCCCEEEEEecccCCCCCCcccchheeEeEeeCHHHcchhhccCCCcCCCeEEecCCCCCccCCCC
Confidence 67888886532 34688999998653211 11122222322222110 111112346653 2578999
Q ss_pred CCCeeecC-CC--eEEEEEeecc
Q 009784 275 SGGPAFND-KG--KCVGIAFQSL 294 (526)
Q Consensus 275 SGGPlvn~-~G--~VVGI~~~~~ 294 (526)
|||||+.. +| .++||++.+.
T Consensus 200 SGgPL~~~~~~~~~l~GI~S~g~ 222 (251)
T 1pyt_D 200 SGGPLNCQADGQWDVRGIVSFGS 222 (251)
T ss_dssp TTCEEEEESSSSEEEEEEEEECC
T ss_pred CCCceEEEECCCEEEEEEEEECC
Confidence 99999864 45 6999998764
No 107
>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating factor-I, PPAF-I, serine proteas hydrolase; HET: NAG; 1.70A {Holotrichia diomphalia}
Probab=99.26 E-value=5.1e-11 Score=118.61 Aligned_cols=165 Identities=18% Similarity=0.159 Sum_probs=100.1
Q ss_pred eeeeCCCCCCccccCCC-------cceEEEEEEEeCCEEEecccccCCC------CeEEEEEcC----------------
Q 009784 130 CVHTEPNFSLPWQRKRQ-------YSSSSSGFAIGGRRVLTNAHSVEHY------TQVKLKKRG---------------- 180 (526)
Q Consensus 130 ~~~~~~~~~~P~~~~~~-------~~~~GSGfvI~~g~ILT~aHvV~~~------~~i~V~~~~---------------- 180 (526)
........++||+.... ....|+|.+|++.||||+|||+.+. ..+.|++..
T Consensus 25 gG~~a~~~~~Pw~v~l~~~~~~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~~~ 104 (278)
T 2olg_A 25 NGDDTVPEEFPWTAMIGYKNSSNFEQFACGGSLINNRYIVTAAHCVAGRVLRVVGALNKVRLGEWNTATDPDCYGAVRVC 104 (278)
T ss_dssp CSSBCCTTSSTTEEEEEEECTTCCEEEEEEEEECSSSEEEECGGGTSTHHHHHTCEEEEEEESCSBTTCSSCEETTTTEE
T ss_pred CCEECCCCCCCceEEEEEecCCCCcceeEEEEEEeCCEEEEhHHhCCCcccccccceeEEEeCcccCCCCcccccccccc
Confidence 33344445556654321 2357999999999999999999752 356676631
Q ss_pred ---CCcEEEEEEEEecc---------CCCeEEEEecccc-cccCceeeecCCCC---cCCCcEEEEeeCCCCC------c
Q 009784 181 ---SDTKYLATVLAIGT---------ECDIAMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGD------T 238 (526)
Q Consensus 181 ---~g~~~~a~vv~~d~---------~~DlAlLkv~~~~-~~~~~~pl~l~~~~---~~g~~V~~iG~p~~~~------~ 238 (526)
....+..+-+..++ .+||||||++.+. +...+.|+.|.... ..++.+++.||..... .
T Consensus 105 ~~~~~~~~~v~~i~~Hp~y~~~~~~~~nDIALl~L~~~v~~~~~v~picLp~~~~~~~~g~~~~v~GWG~t~~~~~~~~l 184 (278)
T 2olg_A 105 VPDKPIDLGIEETIQHPDYVDGSKDRYHDIALIRLNRQVEFTNYIRPVCLPQPNEEVQVGQRLTVVGWGRTETGQYSTIK 184 (278)
T ss_dssp CSSCCEEECEEEEEECTTCCTTCSSCTTCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESCCSSSCCCCSBC
T ss_pred CCCCceEEeeEEEEECCCCcCCCCCCCCeEEEEEECCCCcCCCCcCccCcCCCCCCcCCCCEEEEEcCCcCCCCCccchh
Confidence 01233344344443 4699999998763 44568888886532 4578999999865321 1
Q ss_pred eeEEEEEEeceeeeeccCC---ceeeeEEEEc----ccCCCCCCCCeeecC--CC--eEEEEEeecc
Q 009784 239 ISVTSGVVSRIEILSYVHG---STELLGLQID----AAINSGNSGGPAFND--KG--KCVGIAFQSL 294 (526)
Q Consensus 239 ~sv~~GiVs~~~~~~~~~~---~~~~~~i~~d----a~i~~G~SGGPlvn~--~G--~VVGI~~~~~ 294 (526)
..+..-+++...+...... .....+++.. ...|.|+|||||+.. +| .++||++.+.
T Consensus 185 ~~~~~~i~~~~~C~~~~~~~~~~~~~~~~Ca~~~~~~~~C~GDSGGPL~~~~~~~~~~l~GIvS~g~ 251 (278)
T 2olg_A 185 QKLAVPVVHAEQCAKTFGAAGVRVRSSQLCAGGEKAKDSCGGDSGGPLLAERANQQFFLEGLVSFGA 251 (278)
T ss_dssp EEEEEEBCCGGGGGGGGSSTTCCCCTTEEEECCTTCTTCCCCCTTCEEEEEEGGGEEEEEEEEEECC
T ss_pred hcccccccCHHHHHHHhccccccCCCceEeeecCCCCeeCCCccCcceEEEcCCCcEEEEEEEEECC
Confidence 1233334444333221111 1112346653 357899999999864 34 6999998764
No 108
>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase; 1.90A {Homo sapiens} PDB: 1ekb_B
Probab=99.26 E-value=5.1e-11 Score=115.25 Aligned_cols=185 Identities=14% Similarity=0.102 Sum_probs=109.3
Q ss_pred eCCCCCCccccCCC--cceEEEEEEEeCCEEEecccccCCC----CeEEEEEcC---------CCcEEEEEEEEeccC--
Q 009784 133 TEPNFSLPWQRKRQ--YSSSSSGFAIGGRRVLTNAHSVEHY----TQVKLKKRG---------SDTKYLATVLAIGTE-- 195 (526)
Q Consensus 133 ~~~~~~~P~~~~~~--~~~~GSGfvI~~g~ILT~aHvV~~~----~~i~V~~~~---------~g~~~~a~vv~~d~~-- 195 (526)
.....++||..... ....|+|.+|++.+|||+|||+.+. ..+.|.+.. ....+..+-+..++.
T Consensus 6 ~a~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~v~~i~~hp~y~ 85 (235)
T 4dgj_A 6 DAKEGAWPWVVGLYYDDRLLCGASLVSSDWLVSAAHCVYGRNLEPSKWTAILGLHMKSNLTSPQTVPRLIDEIVINPHYN 85 (235)
T ss_dssp ECCTTSSTTEEEEEETTEEEEEEEECSSSEEEECHHHHTTSCSSGGGEEEEESCCBTTCCSCTTCEEEEEEEEEECTTCB
T ss_pred cCCCCCCCcEEEEeeCCCeEEEEEEeeCCEEEECHHhcCCCCCCCccEEEEEeeecccccCCCceeEEeEEEEEECCCCC
Confidence 34455667766432 3457999999999999999999542 346666531 112334444555554
Q ss_pred -----CCeEEEEecccc-cccCceeeecCCCC---cCCCcEEEEeeCCCCC-------ceeEEEEEEeceeeeeccCC-c
Q 009784 196 -----CDIAMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGD-------TISVTSGVVSRIEILSYVHG-S 258 (526)
Q Consensus 196 -----~DlAlLkv~~~~-~~~~~~pl~l~~~~---~~g~~V~~iG~p~~~~-------~~sv~~GiVs~~~~~~~~~~-~ 258 (526)
+||||||++.+. +...+.|+.|.... ..++.+++.||..... ...+...+++...+...... .
T Consensus 86 ~~~~~~DiALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~ 165 (235)
T 4dgj_A 86 RRRKDNDIAMMHLEFKVNYTDYIQPISLPEENQVFPPGRNCSIAGWGTVVYQGTTADILQEADVPLLSNERCQQQMPEYN 165 (235)
T ss_dssp TTTTBTCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESSBSSTTCCBCSBCEEEEEEEECHHHHHHHCTTSC
T ss_pred CCCCCCeEEEEEECCccccCCcccccCCCCcccCCCCCCEEEEEecccCCCCCccchhheEeEeeecCHHHhhhhccCcc
Confidence 699999998753 44567888887533 3578899999864211 12334444444433221111 1
Q ss_pred eeeeEEEEc-----ccCCCCCCCCeeecC-CC--eEEEEEeeccccCccccccccccHHHHHHHHHH
Q 009784 259 TELLGLQID-----AAINSGNSGGPAFND-KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQD 317 (526)
Q Consensus 259 ~~~~~i~~d-----a~i~~G~SGGPlvn~-~G--~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~ 317 (526)
....++++. ...|.|+|||||+.. +| .++||++.+..-.....-+....+...++++++
T Consensus 166 ~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~l~Gi~S~g~~c~~~~~p~vyt~V~~~~~WI~~ 232 (235)
T 4dgj_A 166 ITENMICAGYEEGGIDSCQGDSGGPLMCQENNRWFLAGVTSFGYECALPNRPGVYARVSRFTEWIQS 232 (235)
T ss_dssp CCTTEEEECCTTCCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGTHHHHHT
T ss_pred CCCCeEeecCCCCCCccCCCCCCCeEEEEECCcEEEEEEEEEcCCCCCCCCCEEEeeHHHHHHHHHH
Confidence 122346653 257899999999965 44 499999876532211222333444444444443
No 109
>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation, hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC; 1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A* 2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A* 3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A*
Probab=99.25 E-value=4.7e-11 Score=116.52 Aligned_cols=186 Identities=19% Similarity=0.179 Sum_probs=110.2
Q ss_pred eCCCCCCccccCCCc-----ceEEEEEEEeCCEEEecccccCC----CCeEEEEEcC-----CCcEEEEEEEEeccC---
Q 009784 133 TEPNFSLPWQRKRQY-----SSSSSGFAIGGRRVLTNAHSVEH----YTQVKLKKRG-----SDTKYLATVLAIGTE--- 195 (526)
Q Consensus 133 ~~~~~~~P~~~~~~~-----~~~GSGfvI~~g~ILT~aHvV~~----~~~i~V~~~~-----~g~~~~a~vv~~d~~--- 195 (526)
.....++||+..... ...|+|.+|++.+|||+|||+.. ...+.|.+.. .++.+..+-+..++.
T Consensus 6 ~a~~~~~Pw~v~l~~~~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~~v~~g~~~~~~~~~~~~v~~i~~Hp~y~~ 85 (245)
T 2f9n_A 6 EAPRSKWPWQVSLRVRDRYWMHFCGGSLIHPQWVLTAAHCVGPDVKDLATLRVQLREQHLYYQDQLLPVSRIIVHPQFYI 85 (245)
T ss_dssp ECCTTSCTTEEEEEEESSSEEEEEEEEEEETTEEEECGGGGCSSCCCGGGEEEECSCSBTTTTCCCBCEEEEEECTTCCS
T ss_pred ECCCCCCCcEEEEEEcCCCcceEEEEEEeeCCEEEECHHhCCCCCCCcceEEEEeCCcccccCceEEEEEEEEECCCccC
Confidence 344456677654322 35799999999999999999953 2456776531 123344444555543
Q ss_pred ----CCeEEEEecccc-cccCceeeecCCC---CcCCCcEEEEeeCCCCC---------ceeEEEEEEeceeeeec-cC-
Q 009784 196 ----CDIAMLTVEDDE-FWEGVLPVEFGEL---PALQDAVTVVGYPIGGD---------TISVTSGVVSRIEILSY-VH- 256 (526)
Q Consensus 196 ----~DlAlLkv~~~~-~~~~~~pl~l~~~---~~~g~~V~~iG~p~~~~---------~~sv~~GiVs~~~~~~~-~~- 256 (526)
+||||||++.+. +...+.|+.|... ...++.+++.||..... ...+..-+++...+... ..
T Consensus 86 ~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~ 165 (245)
T 2f9n_A 86 IQTGADIALLELEEPVNISSRVHTVMLPPASETFPPGMPCWVTGWGDVDNDEPLPPPFPLKQVKVPIMENHICDAKYHLG 165 (245)
T ss_dssp SCCTTCCEEEEESSCCCCCSSSCCCBCCCTTCCCCTTCCEEEEESCCSBTTBCCCTTCBCEEEECCEECHHHHHHHHHTT
T ss_pred CCCCCcEEEEEeCCCCcCCCCccccCCCCcccCCCCCCEEEEEEeCCCCCCCCCCccccceEEEEEEcCHHHhhhhhccc
Confidence 699999999763 4456788888643 23578899999864321 11223334443333211 10
Q ss_pred -------CceeeeEEEEc---ccCCCCCCCCeeecC-CC--eEEEEEeeccccCccccccccccHHHHHHHHHHH
Q 009784 257 -------GSTELLGLQID---AAINSGNSGGPAFND-KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDY 318 (526)
Q Consensus 257 -------~~~~~~~i~~d---a~i~~G~SGGPlvn~-~G--~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l 318 (526)
......+++.. ...|.|+|||||+.. +| .++||++.+..-.....-+...-+....+++++.
T Consensus 166 ~~~~~~~~~~~~~~~Ca~~~~~~~C~GDSGgPL~~~~~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI~~~ 240 (245)
T 2f9n_A 166 AYTGDDVRIIRDDMLCAGNSQRDSCQGDSGGPLVCKVNGTWLQAGVVSWGEGCAQPNRPGIYTRVTYYLDWIHHY 240 (245)
T ss_dssp CCSCTTSCCSCTTEEEECCSSSBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSBTTBCEEEEEGGGGHHHHHHH
T ss_pred ccccccccccccccEeecCCCCCcCCCCCCCceEEEECCEEEEEEEEEeCCCCCCCCCCeEEEEHHHHHHHHHHH
Confidence 00111245553 357899999999865 56 5999998765321112223444455555666554
No 110
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=99.25 E-value=9.6e-12 Score=105.07 Aligned_cols=73 Identities=22% Similarity=0.323 Sum_probs=65.4
Q ss_pred ccceEEEEeCCCCcccCCCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEEEEEEEEec
Q 009784 352 QKGVRIRRVDPTAPESEVLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLA 431 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~~~~~v~l~ 431 (526)
..|++|.+|.++|||++||++||+|++|||++|.++.++. ..+....+|+++.|+|.|+|+..++++++.
T Consensus 6 ~~Gv~V~~V~~~spA~~GL~~GD~I~~Ing~~v~~~~dl~----------~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~ 75 (100)
T 3i18_A 6 YDGVYVMSVKDDVPAADVLHAGDLITEIDGNAFKSSQEFI----------DYIHSKKVGDTVKINYKHGDKNEQADIKLT 75 (100)
T ss_dssp CCCEEEEEECTTSGGGGTCCTTCEEEEETTBCCSSHHHHH----------HHHHTSCTTCEEEEEEEETTEEEEEEEECE
T ss_pred CCCEEEEEeCCCCchHHCCCCCCEEEEECCEECCCHHHHH----------HHHHhCCCCCEEEEEEEECCEEEEEEEEEe
Confidence 5799999999999998899999999999999999988864 666666689999999999999999999887
Q ss_pred ccc
Q 009784 432 THR 434 (526)
Q Consensus 432 ~~~ 434 (526)
..+
T Consensus 76 ~~~ 78 (100)
T 3i18_A 76 AID 78 (100)
T ss_dssp ECS
T ss_pred cCC
Confidence 654
No 111
>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes scabiei type hominis} SCOP: b.47.1.0
Probab=99.24 E-value=2.6e-11 Score=116.71 Aligned_cols=168 Identities=21% Similarity=0.218 Sum_probs=102.2
Q ss_pred EEEEEEEeCCEEEecccccCC--CCeEEEEEcCC-------CcEEEEEEEEec------cCCCeEEEEecccc-ccc-Cc
Q 009784 150 SSSGFAIGGRRVLTNAHSVEH--YTQVKLKKRGS-------DTKYLATVLAIG------TECDIAMLTVEDDE-FWE-GV 212 (526)
Q Consensus 150 ~GSGfvI~~g~ILT~aHvV~~--~~~i~V~~~~~-------g~~~~a~vv~~d------~~~DlAlLkv~~~~-~~~-~~ 212 (526)
.|+|.+|++.+|||+|||+.+ ...+.|.+... +..+..+-+..+ ..+||||||++.+. +.. .+
T Consensus 27 ~CgGtLI~~~~VLTAAHC~~~~~~~~~~v~~g~~~~~~~~~~~~~~v~~i~~h~y~~~~~~~DIALl~L~~~v~~~~~~v 106 (228)
T 3h7o_A 27 TCGGAILSQWFVLTAAHCVFDQKPETIVIQYESTNLWEDPGKSDPYVSHVYLSFYRQETMENDIAILELSRPLKLDGLKS 106 (228)
T ss_dssp EEEEEESSSSEEEECHHHHTTSCGGGCEEEESCSBTTTBCCEEECCEEEEEESSCBTTTTBTCCEEEEESSCCCCCSSSS
T ss_pred EeeeEEeeCCEEEEcHHhcccCCCCcEEEEecccccccCCCceeeeEEEEEccccCCCCccCCEEEEEECCccccccccc
Confidence 899999999999999999953 34566665321 112223333332 24799999998764 333 57
Q ss_pred eeeecCCC---CcCCCcEEEEeeCCCCC-------ceeEEEEEEeceeeeeccCC-ceeeeEEEEc---ccCCCCCCCCe
Q 009784 213 LPVEFGEL---PALQDAVTVVGYPIGGD-------TISVTSGVVSRIEILSYVHG-STELLGLQID---AAINSGNSGGP 278 (526)
Q Consensus 213 ~pl~l~~~---~~~g~~V~~iG~p~~~~-------~~sv~~GiVs~~~~~~~~~~-~~~~~~i~~d---a~i~~G~SGGP 278 (526)
.|+.|... ...++.+++.||..... ...+...+++...+...... .....+++.. ...+.|+||||
T Consensus 107 ~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~C~GDsGgP 186 (228)
T 3h7o_A 107 KPAKLPDIEFRPKTGSDVLVSGYGDGQTMDPKDHDLKSAQLTVVDLDECRTKYGPIFLSLQVFCAQKVGVSLESGDAGDP 186 (228)
T ss_dssp CCCBCCCTTCCCCTTCEEEEEECCCSSCSCGGGGBCEEEEEEEECHHHHHHHHTTSCCCSSEEEEECTTCCCCGGGTTCE
T ss_pred ccccCCccccCCCCCCeeEEEEEecCCCCCCcccccccceeEEEcHHHHHHHhcCccCCceEEecCCCCCcCCCCCCCCc
Confidence 78888753 35678999999865321 12344444544333221111 1112245543 46789999999
Q ss_pred eecCCCeEEEEEeeccccCccccccccccHHHHHHHHHHHH
Q 009784 279 AFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYE 319 (526)
Q Consensus 279 lvn~~G~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l~ 319 (526)
|+. +++++||++.+..-.. ..-+...-+...++++++..
T Consensus 187 l~~-~~~l~Gi~S~g~~c~~-~~p~vyt~v~~~~~WI~~~i 225 (228)
T 3h7o_A 187 TVQ-QDTLVGVAAYFPKRPE-GAPEVFTKVGSYVSWIQDII 225 (228)
T ss_dssp EEE-TTEEEEEECCCTTCCT-TCCEEEEEGGGTHHHHHHHH
T ss_pred cee-cCeEEEEEeecCcCCC-CCCcEEEEHHHHHHHHHHHh
Confidence 997 6889999987643211 22334455555666666554
No 112
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=99.23 E-value=3.9e-12 Score=114.18 Aligned_cols=100 Identities=17% Similarity=0.178 Sum_probs=69.5
Q ss_pred cCceeeccccCceeeeccChh-HHhhhcCCCCccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecC--CCCccccccc
Q 009784 321 NGAYTGFPLLGVEWQKMENPD-LRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAN--DGTVPFRHGE 396 (526)
Q Consensus 321 ~g~~~~~~~LGi~~~~~~~~~-~~~~lgl~~~~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~--~~~l~~~~~~ 396 (526)
.+++. +++||+.+....+.+ ..+.+++.....|++|.+|.++|||++ ||++||+|++|||++|.+ ..++.
T Consensus 32 ~~~~~-~~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~----- 105 (139)
T 2vz5_A 32 LRQGE-NLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQAR----- 105 (139)
T ss_dssp EEETT-EEECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHH-----
T ss_pred cCCCC-cccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEEcCCCCHHHHH-----
Confidence 34444 789999986532221 123455544568999999999999999 999999999999999985 34432
Q ss_pred chhhhhhhhhcCCCCEEEEEEEECCEEEEEEEEecc
Q 009784 397 RIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLAT 432 (526)
Q Consensus 397 ~~~~~~~l~~~~~G~~v~l~v~R~G~~~~~~v~l~~ 432 (526)
.++.. .+|+++.|+|.|+|+..++++++..
T Consensus 106 -----~~l~~-~~g~~v~l~v~R~g~~~~v~~~~~~ 135 (139)
T 2vz5_A 106 -----KRLTK-RSEEVVRLLVTRQSLQKAVQQSMLS 135 (139)
T ss_dssp -----HHHCC-TTCSEEEEEEEECC-------CCCC
T ss_pred -----HHHHh-CCCCEEEEEEEECCEEEEEEEeece
Confidence 44544 6899999999999999888776654
No 113
>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C
Probab=99.23 E-value=2.6e-11 Score=118.01 Aligned_cols=170 Identities=13% Similarity=0.117 Sum_probs=99.7
Q ss_pred eEEEEEEEeCCEEEecccccCCCCeEEEEEcCCC-cEE--EE--E-----EEEecc-------C--CCeEEEEecccc-c
Q 009784 149 SSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGSD-TKY--LA--T-----VLAIGT-------E--CDIAMLTVEDDE-F 208 (526)
Q Consensus 149 ~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~~g-~~~--~a--~-----vv~~d~-------~--~DlAlLkv~~~~-~ 208 (526)
..|+|.+|++.+|||+|||+.+...+.|.+.... ... .. + -+..++ . +||||||++.+. +
T Consensus 26 ~~CgGtLIs~~~VLTAAhC~~~~~~~~v~~G~~~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~DIALl~L~~~v~~ 105 (240)
T 1fon_A 26 HTCGGSLIAPDWVVTAGHCISTSRTYQVVLGEYDRSVLEGSEQVIPINAGDLFVHPLWNSNCVACGNDIALVKLSRSAQL 105 (240)
T ss_dssp EEECCEEEETTEEEECGGGCCTTSCEEEEEEEEETTEEEEEEEEEEECTTSEEECTTCCTTCGGGCCCCEEEECSSCCCC
T ss_pred eEEEEEEeeCCEEEECHHHCCCCCceEEEeeeeeccccCCCceeEeeeeeEEEECCCCcCCCccCCCCEEEEEecCcccc
Confidence 6799999999999999999988777777763111 111 01 1 123333 3 899999998763 3
Q ss_pred ccCceeeecCCC---CcCCCcEEEEeeCCCCC-------ceeEEEEEEeceeeeec-cCC-ceeeeEEEEc---ccCCCC
Q 009784 209 WEGVLPVEFGEL---PALQDAVTVVGYPIGGD-------TISVTSGVVSRIEILSY-VHG-STELLGLQID---AAINSG 273 (526)
Q Consensus 209 ~~~~~pl~l~~~---~~~g~~V~~iG~p~~~~-------~~sv~~GiVs~~~~~~~-~~~-~~~~~~i~~d---a~i~~G 273 (526)
.+.+.|+.|... ...++.+++.||..... ...+..-+++...+... ..+ .....+++.. ...|.|
T Consensus 106 ~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~C~G 185 (240)
T 1fon_A 106 GDKVQLANLPPAGDILPNEAPCYISGWGRLYTGGPLPDKLQQALLPTVDYEHCSQWDWWGITVKKTMVCAGGDTRSGCNG 185 (240)
T ss_dssp TTSCCCCBCCCTTCCCCTTCCCEEEECTTCCCSSSCCSBCEEEECCEECHHHHTSTTTTGGGCCTTEEEECCSSSCSTTS
T ss_pred CCcccccCCCCcccCCCCCCeEEEEEEeEcCCCCCCChhheEEEEeeeCHHHhccceecCCccccceEeecCCCCcccCC
Confidence 456788888653 23578899999864321 11223334443333221 011 1112245553 357899
Q ss_pred CCCCeeecC--CC--eEEEEEeeccc--cCccccccccccHHHHHHHHHHH
Q 009784 274 NSGGPAFND--KG--KCVGIAFQSLK--HEDVENIGYVIPTPVIMHFIQDY 318 (526)
Q Consensus 274 ~SGGPlvn~--~G--~VVGI~~~~~~--~~~~~~~~~aIP~~~i~~~l~~l 318 (526)
+|||||+.. +| .++||++.+.. -.....-+....+....+++++.
T Consensus 186 DsGgPL~~~~~~~~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~ 236 (240)
T 1fon_A 186 DSGGPLNCPAADGSWQVHGVTSFVSAFGCNTIKKPTVFTRVSAFIDWIDET 236 (240)
T ss_dssp CTTCEEEEECSSSCEEEEEEEEECCTTCSSBTTBCEEEEEGGGSHHHHHHH
T ss_pred CCCCeEEeEcCCCCEEEEEEEEEcCCCCCCCCCCCcEEEEhHHHHHHHHHH
Confidence 999999853 56 89999987541 11112223334444445555543
No 114
>1z8g_A Serine protease hepsin; serine protease hepsin, protease, hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A {Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A 1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A*
Probab=99.22 E-value=1.7e-10 Score=120.04 Aligned_cols=194 Identities=15% Similarity=0.101 Sum_probs=117.4
Q ss_pred EEEEeeeeCCCCCCccccCCC--cceEEEEEEEeCCEEEecccccCC----CCeEEEEEcC------CCcEEEEEEEEec
Q 009784 126 VKVFCVHTEPNFSLPWQRKRQ--YSSSSSGFAIGGRRVLTNAHSVEH----YTQVKLKKRG------SDTKYLATVLAIG 193 (526)
Q Consensus 126 V~I~~~~~~~~~~~P~~~~~~--~~~~GSGfvI~~g~ILT~aHvV~~----~~~i~V~~~~------~g~~~~a~vv~~d 193 (526)
.+|..........+||+.... ....|+|.+|++.||||+|||+.. ...+.|.+.. .+..+..+-+..+
T Consensus 116 ~rIvgG~~a~~~~~Pw~v~l~~~~~~~CgGsLIs~~~VLTAAHCv~~~~~~~~~~~V~~G~~~~~~~~~~~~~V~~i~~H 195 (372)
T 1z8g_A 116 DRIVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAVVYH 195 (372)
T ss_dssp --CBSCEECCTTSSTTEEEEEETTEEEEEEEESSSSEEEECGGGCCGGGCCGGGEEEEESCSBTTCTTSEEECEEEEEEE
T ss_pred CceECCEECCCCCCCcEEEEEeCCceEEEEEEecCCEEEEChhhcCCCCCccceEEEEEeeEeccCCCCcEEEEEEEEEC
Confidence 356666777778889987543 346799999999999999999942 2457777642 1224444445444
Q ss_pred cC-------------CCeEEEEecccc-cccCceeeecCCCC---cCCCcEEEEeeCCCCC-------ceeEEEEEEece
Q 009784 194 TE-------------CDIAMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGD-------TISVTSGVVSRI 249 (526)
Q Consensus 194 ~~-------------~DlAlLkv~~~~-~~~~~~pl~l~~~~---~~g~~V~~iG~p~~~~-------~~sv~~GiVs~~ 249 (526)
+. +||||||++.+. +.+.+.|+.|.... ..++.+++.||..... ...+..-+++..
T Consensus 196 p~y~~~~~~~~~~~~nDIALlkL~~pv~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~~~~~~~L~~~~v~ii~~~ 275 (372)
T 1z8g_A 196 GGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISND 275 (372)
T ss_dssp TTCGGGTCTTCCCCTTCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSSTTSCBCSBCEEEEEEEECHH
T ss_pred CCccccccCCCCCCCccEEEEEECCCCCCCCceeccccCCcccCCCCCCEEEEEecCCCCCCCCCCceeeEEEEEecChH
Confidence 43 599999998763 44568888887532 3478899999864321 123344455544
Q ss_pred eeeec--cCCceeeeEEEEc-----ccCCCCCCCCeeecCC-----C--eEEEEEeeccccCccccccccccHHHHHHHH
Q 009784 250 EILSY--VHGSTELLGLQID-----AAINSGNSGGPAFNDK-----G--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFI 315 (526)
Q Consensus 250 ~~~~~--~~~~~~~~~i~~d-----a~i~~G~SGGPlvn~~-----G--~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l 315 (526)
.+... ........+|+.. ...+.|+|||||+..+ | .++||++.+..-.....-+...-+....++|
T Consensus 276 ~C~~~~~~~~~i~~~~iCag~~~~~~d~C~GDSGGPLv~~~~~~~~~~~~lvGIvS~G~~C~~~~~p~vyt~V~~y~~WI 355 (372)
T 1z8g_A 276 VCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWI 355 (372)
T ss_dssp HHTSTTTTTTCCCTTEEEESCTTCSCBCCTTCTTCEEEEEECTTSSCEEEEEEEEEEBSSSSCTTCCEEEEEGGGGHHHH
T ss_pred HhCcchhcCCcCCCCeEeeecCCCCCcCCCCCCccceEeccCcCCCCCEEEEEEEEeCCCCCCCCCCeEEEEHHHHHHHH
Confidence 43321 1111122356653 2578999999998543 3 6999998765321112223334444455555
Q ss_pred HHHH
Q 009784 316 QDYE 319 (526)
Q Consensus 316 ~~l~ 319 (526)
++..
T Consensus 356 ~~~i 359 (372)
T 1z8g_A 356 FQAI 359 (372)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5443
No 115
>1zyo_A Serine protease; beta-barrel, glutamyl endopeptidase, hydrolase; 2.40A {Sesbania mosaic virus}
Probab=99.20 E-value=2.1e-10 Score=107.93 Aligned_cols=149 Identities=16% Similarity=0.143 Sum_probs=97.3
Q ss_pred eEEEEEEEe-C--CEEEecccccCCCC-eEEEEEcCCCcEEE-----EEEEEeccCCCeEEEEeccccc-ccCceeeecC
Q 009784 149 SSSSGFAIG-G--RRVLTNAHSVEHYT-QVKLKKRGSDTKYL-----ATVLAIGTECDIAMLTVEDDEF-WEGVLPVEFG 218 (526)
Q Consensus 149 ~~GSGfvI~-~--g~ILT~aHvV~~~~-~i~V~~~~~g~~~~-----a~vv~~d~~~DlAlLkv~~~~~-~~~~~pl~l~ 218 (526)
..|.|+++. + ++|||++||+.+.. .+.... ++..++ ......|+..|+|||++++... .-...++.|.
T Consensus 27 h~G~g~~V~~~G~~~LlTA~Hv~~~~~~~~~~~k--~g~~ip~~~~~~~~~~~d~~~D~all~vp~~~~s~lg~~~a~~~ 104 (191)
T 1zyo_A 27 TIGFGCRTKIDGEDCLLTAHHVWCNSMRPTGLAK--AGKQVSVEDWEISMSSSDKMLDFAIVRVPTHVWSKLGVKSTPLV 104 (191)
T ss_dssp EEEEEEEEEC--CEEEEECHHHHTSSSCCCEEEE--TTEEEECCSCEEEEEECCTTTCEEEEECCHHHHHHHTCCCCCBC
T ss_pred EEEEEEEEEECCCcEEEEChhhCcCCcceeeecC--CCCEEEcccceeeEccCCCCCcEEEEEcCCChhhhcCcceeEee
Confidence 678999886 4 49999999998753 233332 555544 3333446789999999986421 0134555553
Q ss_pred CCCcCCCcEEEEeeCCCCCceeEEEEEEeceeeeeccCCceeeeEEEEcccCCCCCCCCeeecCCCeEEEEEeeccccCc
Q 009784 219 ELPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHED 298 (526)
Q Consensus 219 ~~~~~g~~V~~iG~p~~~~~~sv~~GiVs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VVGI~~~~~~~~~ 298 (526)
.. ..++.|.++|++..... ....|+.... .. . ..+++++...+|.||+|+||.+ .||||+.+.. +
T Consensus 105 ~~-~~~~~vt~yg~~~~~~~-~s~~g~~~~~------~~-~--~~~~~~~~T~~G~SGsP~~ng~-~IVGvh~G~~---~ 169 (191)
T 1zyo_A 105 CP-SSKDVITCYGGSSSDCL-MSGVGSSSTS------EF-T--WKLTHTCPTAAGWSGTPLYSSR-GVVGMHVGFE---E 169 (191)
T ss_dssp CC-CSCEEEEEEEESSTTSE-EEEEEEEEEC------SS-T--TEEEECCCCCTTCTTCEEECSS-CEEEEEEEEE---E
T ss_pred cC-CCCccEEEEeecCCCCE-eecccceeec------cC-C--cEEEEEcCCCCCCCCCcEEcCC-eEEEEEeCcc---c
Confidence 22 35789999999876443 4445533211 11 0 2478888889999999999974 7889998853 2
Q ss_pred cccccccccHHHHHHH
Q 009784 299 VENIGYVIPTPVIMHF 314 (526)
Q Consensus 299 ~~~~~~aIP~~~i~~~ 314 (526)
..+.+.++-+..++.+
T Consensus 170 ~~~~N~a~n~~~~~~~ 185 (191)
T 1zyo_A 170 IGKLNRGVNMFYVANY 185 (191)
T ss_dssp TTTEEEEECHHHHHHH
T ss_pred CCceeeeeehHHHhhh
Confidence 3456667776666654
No 116
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=99.20 E-value=3.9e-11 Score=114.95 Aligned_cols=130 Identities=14% Similarity=0.143 Sum_probs=95.4
Q ss_pred CccceEEEEeCCCCcccC-CCCCC-cEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEEEEEEE
Q 009784 351 DQKGVRIRRVDPTAPESE-VLKPS-DIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNI 428 (526)
Q Consensus 351 ~~~Gv~V~~V~~~spA~~-GL~~G-DvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~~~~~v 428 (526)
...|++|.+|.++|||++ ||++| |+|++|||++|.++.++. ..+....+|++++|+|+|+++..+.++
T Consensus 14 ~~~G~~V~~V~~~SpA~~AGL~~G~D~I~~ing~~v~~~~~~~----------~~~~~~~~g~~v~l~v~R~~~~~~~~v 83 (209)
T 3rle_A 14 GTEGYHVLRVQENSPGHRAGLEPFFDFIVSINGSRLNKDNDTL----------KDLLKANVEKPVKMLIYSSKTLELRET 83 (209)
T ss_dssp SSEEEEEEEECTTSHHHHTTCCTTTEEEEEETTEECCSSSSHH----------HHHHHHTTTSCEEEEEEETTTCCEEEE
T ss_pred CCCEEEEEEECCCCHHHHCCCCcCCeEEEEECCEECcCHHHHH----------HHHHhcCCCCEEEEEEEecCCceEEEE
Confidence 457999999999999999 99999 999999999999999864 455566789999999999875555555
Q ss_pred EecccccccCCCCCCCCCceEEEeeEEEEecccc---ceeeeeeeecc--hhhhccccc-cceeeeecccchhhhHHHH
Q 009784 429 TLATHRRLIPSHNKGRPPSYYIIAGFVFSRCLYL---ISVLSMERIMN--MKLRSSFWT-SSCIQCHNCQMSSLLWCLR 501 (526)
Q Consensus 429 ~l~~~~~~~p~~~~~~~p~~~i~gG~~f~~lt~~---~~~~~~~~i~~--~~~~sg~~~-~~~~~~~~~~~~~~~~~~~ 501 (526)
++.+... ..... ..|+.+..++.. ...+.+..+.+ .+.++||+. ||+|...|.+ ..+...|+
T Consensus 84 ~l~p~~~------~~~~~----~lGi~~~~~~~~~~~~~Gv~V~~V~~~spA~~aGl~~~GD~I~~ing~-v~~~~~l~ 151 (209)
T 3rle_A 84 SVTPSNL------WGGQG----LLGVSIRFCSFDGANENVWHVLEVESNSPAALAGLRPHSDYIIGADTV-MNESEDLF 151 (209)
T ss_dssp EECCCSS------SSSSS----SSCEEEEEEECTTGGGSCEEEEEECTTSHHHHHTCCTTTEEEEEESSC-CCSSSCHH
T ss_pred EEccccc------ccccC----ccceEEeecChhHccccceEEEEeCCCChHHHCCCCCCCCEEEECCCE-eCCHHHHH
Confidence 5532211 01111 347778776643 13445556655 456899999 9999999988 55555554
No 117
>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*
Probab=99.20 E-value=7.4e-11 Score=120.75 Aligned_cols=190 Identities=16% Similarity=0.192 Sum_probs=113.7
Q ss_pred EEEeeeeCCCCCCccccCCCcceEEEEEEEeCCEEEecccccCC-------CCeEEEEEcCCC-------cEEEEEEEEe
Q 009784 127 KVFCVHTEPNFSLPWQRKRQYSSSSSGFAIGGRRVLTNAHSVEH-------YTQVKLKKRGSD-------TKYLATVLAI 192 (526)
Q Consensus 127 ~I~~~~~~~~~~~P~~~~~~~~~~GSGfvI~~g~ILT~aHvV~~-------~~~i~V~~~~~g-------~~~~a~vv~~ 192 (526)
+|.........++||+........|+|.+|++.||||+|||+.. ...+.|.+.... ..+..+-+..
T Consensus 89 rIvgG~~a~~~~~Pw~v~l~~~~~CgGsLIs~~~VLTAAHCv~~~~~~~~~~~~~~V~~G~~~~~~~~~~~~~~V~~i~~ 168 (329)
T 1md8_A 89 RIIGGQKAKMGNFPWQVFTNIHGRGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVFLGHTNVEELMKLGNHPIRRVSV 168 (329)
T ss_dssp -CBSCCBCCTTSCTTEEEEESSSEEEEEEETTTEEEECGGGTSCTTC-----CCCCEEESCSBHHHHHHHCCCCEEEEEE
T ss_pred cccCCEECCCCCCCCeEeeccCCCcceEEecCCEEEecCCEEEeCCcccCCCceEEEEeccccccccccccceeeEEEEE
Confidence 56666677778889987655456799999999999999999973 234566664211 1223333444
Q ss_pred cc----------CCCeEEEEecccc-cccCceeeecCCCC---cCCCcEEEEeeCCCCCc-----eeEEEEEEeceeeee
Q 009784 193 GT----------ECDIAMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGDT-----ISVTSGVVSRIEILS 253 (526)
Q Consensus 193 d~----------~~DlAlLkv~~~~-~~~~~~pl~l~~~~---~~g~~V~~iG~p~~~~~-----~sv~~GiVs~~~~~~ 253 (526)
++ .+||||||++.+. +.+.+.|+.|.... ..+..+++.||...... ..+..-+++...+..
T Consensus 169 Hp~y~~~~~~~~~nDIALl~L~~~v~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~~~~~L~~~~v~i~~~~~C~~ 248 (329)
T 1md8_A 169 HPDYRQDESYNFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKIAHDLRFVRLPVANPQACEN 248 (329)
T ss_dssp CSSCCSSCTTCCTTCCEEEEESSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECCBCSSSBCSBCEEEEEEBCCHHHHHH
T ss_pred CCCcccccCCCCCccEEEEEECCcccCCCceEccccCCCccccCCCCEEEEEeCCCCCCCCCccceEEEEEEcCHHHHHH
Confidence 43 3599999998763 44568888887543 35788899998653221 122333333322221
Q ss_pred ccC-----CceeeeEEEEc-----ccCCCCCCCCeeecC---CC--eEEEEEeeccccCccccccccccHHHHHHHHHHH
Q 009784 254 YVH-----GSTELLGLQID-----AAINSGNSGGPAFND---KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDY 318 (526)
Q Consensus 254 ~~~-----~~~~~~~i~~d-----a~i~~G~SGGPlvn~---~G--~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l 318 (526)
... ......+|+.. ...+.|+|||||+.. +| .++||++.+..-. ...+...-+....++|++.
T Consensus 249 ~~~~~~~~~~~~~~~iCAg~~~~~~d~C~GDSGGPL~~~~~~~~~~~l~GIvS~G~~C~--~~~gvyT~V~~y~~WI~~~ 326 (329)
T 1md8_A 249 WLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCS--RGYGFYTKVLNYVDWIKKE 326 (329)
T ss_dssp HHHHTTCCCCCCTTEEEESCTTCSCBCCTTTTTCEEEEEETTTTEEEEEEEEEECSSSS--SSCEEEEEGGGTHHHHHHH
T ss_pred HhhcccccccCCCCeEeeecCCCCCcCCCCccccceEEEECCCCcEEEEEEEEECCCcC--CCCcEEEEHHHHHHHHHHH
Confidence 100 01112356653 357899999999853 33 4999998765321 1234444444455555543
No 118
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=99.19 E-value=2.4e-12 Score=107.00 Aligned_cols=72 Identities=24% Similarity=0.328 Sum_probs=63.4
Q ss_pred cceEEEEeCCCCcccCCCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEEEEEEEEecc
Q 009784 353 KGVRIRRVDPTAPESEVLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLAT 432 (526)
Q Consensus 353 ~Gv~V~~V~~~spA~~GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~~~~~v~l~~ 432 (526)
.|++|.+|.++|||++||++||+|++|||++|.++.++. ..+....+|++++|+|+|+|+.+++++++..
T Consensus 1 ~Gv~V~~V~~~spA~~GL~~GD~I~~InG~~v~~~~~l~----------~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~ 70 (91)
T 2kjp_A 1 NGIYASSVVENMPAKGKIEVGDKIISADGKNYQSAEKLI----------DYISSKKAGDKVTLKIEREEKEKRVTLTLKQ 70 (91)
T ss_dssp CCSSCCCCCCSSCCSSCCCSSCEEEEETTBCCSSHHHHH----------HHHSSCCSSCEECEEEESSSCEECCCEECCC
T ss_pred CceEEEEECCCChHHHcCCCCCEEEEECCEECCCHHHHH----------HHHHcCCCCCEEEEEEEECCEEEEEEEEEec
Confidence 378899999999999899999999999999999887754 6666666899999999999999999999877
Q ss_pred cc
Q 009784 433 HR 434 (526)
Q Consensus 433 ~~ 434 (526)
.+
T Consensus 71 ~~ 72 (91)
T 2kjp_A 71 FP 72 (91)
T ss_dssp CT
T ss_pred cC
Confidence 64
No 119
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=99.19 E-value=1.1e-11 Score=103.57 Aligned_cols=74 Identities=28% Similarity=0.409 Sum_probs=65.0
Q ss_pred CccceEEEEeCCCCcccCCCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEEEEEEEEe
Q 009784 351 DQKGVRIRRVDPTAPESEVLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITL 430 (526)
Q Consensus 351 ~~~Gv~V~~V~~~spA~~GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~~~~~v~l 430 (526)
...|++|.+|.++|||++||++||+|++|||+++.++.++. .++....+|++++|+|.|+|+.+++++++
T Consensus 3 ~~~Gv~V~~V~~~spA~~GL~~GD~Il~InG~~v~~~~~l~----------~~l~~~~~g~~v~l~v~R~g~~~~~~v~~ 72 (94)
T 2kl1_A 3 EAKGVYVMSVLPNMPAAGRLEAGDRIAAIDGQPINTSEQIV----------SYVREKQAGDRVRVTFIRDRKQHEAELVL 72 (94)
T ss_dssp CCCCEECCCCCTTSTTBTTBCTTCEEEEETTBCCCCHHHHH----------HHHHHSCTTCCEEEEEEETTEEEEEEECC
T ss_pred CCCcEEEEEECCCChHHhCCCCCCEEEEECCEECCCHHHHH----------HHHHhCCCCCEEEEEEEECCEEEEEEEEE
Confidence 35789999999999998899999999999999999887754 66666668999999999999999999888
Q ss_pred cccc
Q 009784 431 ATHR 434 (526)
Q Consensus 431 ~~~~ 434 (526)
...+
T Consensus 73 ~~~~ 76 (94)
T 2kl1_A 73 KPFP 76 (94)
T ss_dssp CBCS
T ss_pred eeCC
Confidence 7654
No 120
>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A
Probab=99.19 E-value=1.3e-10 Score=121.95 Aligned_cols=192 Identities=16% Similarity=0.180 Sum_probs=119.6
Q ss_pred EEEeeeeCCCCCCccccCCCcceEEEEEEEeCCEEEecccccCC----CCeEEEEEcC------CCcEEEEEEEEecc--
Q 009784 127 KVFCVHTEPNFSLPWQRKRQYSSSSSGFAIGGRRVLTNAHSVEH----YTQVKLKKRG------SDTKYLATVLAIGT-- 194 (526)
Q Consensus 127 ~I~~~~~~~~~~~P~~~~~~~~~~GSGfvI~~g~ILT~aHvV~~----~~~i~V~~~~------~g~~~~a~vv~~d~-- 194 (526)
+|.........++||+........|+|.+|++.||||+|||+.+ ...+.|.+.. +...+..+-+..++
T Consensus 161 rIvgG~~a~~~~~Pw~v~l~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~~V~~G~~~~~~~~~~~~~v~~i~~Hp~y 240 (403)
T 1zjk_A 161 QIYGGQKAKPGDFPWQVLILGGTTAAGALLYDNWVLTAAHAVYEQKHDASALDIRMGTLKRLSPHYTQAWSEAVFIHEGY 240 (403)
T ss_dssp CCSSCEECCTTSSTTEEEEEESCCEEEEEETTTEEEECHHHHGGGTTCSTTEEEEESCSBTTCSCCEEEEEEEEEECTTC
T ss_pred cccCCcCCCCCCcCCEeEeccCCceEEEEecCCEEEEcHHhCCCCCCCcceEEEEccccccCCCCceEEeEEEEEECCCC
Confidence 56677777788899988665456799999999999999999964 4567787742 12334444444443
Q ss_pred ------CCCeEEEEecccc-cccCceeeecCCCC-----cCCCcEEEEeeCCCCC------ceeEEEEEEeceeeeeccC
Q 009784 195 ------ECDIAMLTVEDDE-FWEGVLPVEFGELP-----ALQDAVTVVGYPIGGD------TISVTSGVVSRIEILSYVH 256 (526)
Q Consensus 195 ------~~DlAlLkv~~~~-~~~~~~pl~l~~~~-----~~g~~V~~iG~p~~~~------~~sv~~GiVs~~~~~~~~~ 256 (526)
.+||||||++.+. +...+.|+.|.... ..++.+++.||..... ...+..-+++...+.....
T Consensus 241 ~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~v~GWG~~~~~~~~~~L~~~~v~v~~~~~C~~~~~ 320 (403)
T 1zjk_A 241 THDAGFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQRGFLARNLMYVDIPIVDHQKCTAAYE 320 (403)
T ss_dssp CTTSCCTTCCEEEEESSCCCCBTTBCCCBCCCGGGGGGSSTTCEEEEEESCTTSSSCCCSBCEEEEEEEECHHHHHHHTT
T ss_pred CCCCCCcccEEEEEeCCcCcCCCceecccCCCcccccccCCCCeEEEEcCCcCCCCccCcccEEEEEeEeCHHHHhhhhh
Confidence 4699999999763 45568888887532 3478899999865322 1223444454433322111
Q ss_pred C------ceeeeEEEEc-----ccCCCCCCCCeeecC---CC--eEEEEEeec-cccCccccccccccHHHHHHHHHHH
Q 009784 257 G------STELLGLQID-----AAINSGNSGGPAFND---KG--KCVGIAFQS-LKHEDVENIGYVIPTPVIMHFIQDY 318 (526)
Q Consensus 257 ~------~~~~~~i~~d-----a~i~~G~SGGPlvn~---~G--~VVGI~~~~-~~~~~~~~~~~aIP~~~i~~~l~~l 318 (526)
. .....+|++. ...+.|+|||||+.. +| .++||++.+ ..-......+...-+....++|++.
T Consensus 321 ~~~~~~~~i~~~~~Cag~~~~~~~~C~GDSGGPL~~~~~~~~~~~l~GIvS~g~~~C~~~~~p~vyt~V~~y~~WI~~~ 399 (403)
T 1zjk_A 321 KPPYPRGSVTANMLCAGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWIENI 399 (403)
T ss_dssp SSSCCSSCSCTTEEEECCSSCCTTSCSCSTTCEEEEEETTTTEEEEEEEEEEECSCC--CCCCEEEEEGGGGHHHHHHH
T ss_pred ccccccCcCCCCeEeeccCCCCCCCCcCCCCccEEEEECCCCcEEEEEEEEECCCCCCCCCCCeEEEEHHHHHHHHHHH
Confidence 1 1122356653 357899999999853 34 599999876 2111112234444444455555554
No 121
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=99.18 E-value=1.4e-10 Score=116.12 Aligned_cols=184 Identities=16% Similarity=0.080 Sum_probs=110.3
Q ss_pred CCCCccccCC---CcceEEEEEEEeCCEEEecccccCCCCeEEEEEcC-----CCcEEEEEEEEecc-------CCCeEE
Q 009784 136 NFSLPWQRKR---QYSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRG-----SDTKYLATVLAIGT-------ECDIAM 200 (526)
Q Consensus 136 ~~~~P~~~~~---~~~~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~-----~g~~~~a~vv~~d~-------~~DlAl 200 (526)
..++||+... .....|+|.+|++.||||+|||+.+...+.|.+.. ....+..+-+..++ .+||||
T Consensus 61 ~~~~Pw~v~l~~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~v~~i~~Hp~y~~~~~~nDIAL 140 (283)
T 3f1s_B 61 LQDLPWQVKLTNSEGKDFCGGVIIRENFVLTTAKCSLLHRNITVKTYFNRTSQDPLMIKITHVHVHMRYDADAGENDLSL 140 (283)
T ss_dssp --CCTTEEEEECTTSCEEEEEEEEETTEEEECHHHHTSCSSCEEEECTTC-CCCCEEEEEEEEEECTTCBTTTTBTCCEE
T ss_pred ccccCCEEEEEecCCCeeeccEEecCCEEEEcHHhcCccCceEEEEeeeeCCCCcEEEEeEEEEECCCCCCCCCCCCEEE
Confidence 3456776543 23468999999999999999999887788888742 23345555555555 469999
Q ss_pred EEecccc-cccCceeeecCCCC------cCCCcEEEEeeCCCCC-----ceeEEEEEEeceeeeeccCCceeeeEEEEc-
Q 009784 201 LTVEDDE-FWEGVLPVEFGELP------ALQDAVTVVGYPIGGD-----TISVTSGVVSRIEILSYVHGSTELLGLQID- 267 (526)
Q Consensus 201 Lkv~~~~-~~~~~~pl~l~~~~------~~g~~V~~iG~p~~~~-----~~sv~~GiVs~~~~~~~~~~~~~~~~i~~d- 267 (526)
||++.+. +...+.|+.|.... ..+..+++.||..... ...+..-+++...+...........+|+..
T Consensus 141 l~L~~pv~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~v~~~~~~~C~~~~~~~~~~~~~Ca~~ 220 (283)
T 3f1s_B 141 LELEWPIQCPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWARNGTDLGNSLTTRPVTLVEGEECGQVLNVTVTTRTYCERS 220 (283)
T ss_dssp EEESSCCCTTTTCCCCBCCCHHHHHHTTTTTSCEEEEECBCC-------CEEEEEEEECHHHHHHHHTSCCCTTEEEEEC
T ss_pred EEeCCcccCCCCEEeEECCCCccccccccCCCEEEEEECCCCCCCCCceeeEEEEeEeCHHHHhhhhcCCCCCCeEcccC
Confidence 9998763 45568888887532 3578899999865211 112334444433332211111112245442
Q ss_pred -ccCCCCCCCCeeecC-CCe--EEEEEeeccccCccccccccccHHHHHHHHHHHHH
Q 009784 268 -AAINSGNSGGPAFND-KGK--CVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEK 320 (526)
Q Consensus 268 -a~i~~G~SGGPlvn~-~G~--VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 320 (526)
.....|+|||||+.. +|+ ++||++.+.. ......+...-+....++|++..+
T Consensus 221 ~~~~~~gDSGgPlv~~~~~~~~l~GIvS~g~c-~~~~~p~vyt~V~~y~~WI~~~~~ 276 (283)
T 3f1s_B 221 SVAAMHWMDGSVVTREHRGSWFLTGVLGSQPV-GGQAHMVLVTKVSRYSLWFKQIMN 276 (283)
T ss_dssp SSCGGGBCTTCEEEEECSSCEEEEEEECCCSG-GGCSSEEEEEEGGGGHHHHHHHHT
T ss_pred CCCCCCCCCCCcEEEEECCEEEEEEEEEeCCC-CCCCcceEEEEhHHhHHHHHHHhh
Confidence 234468999999864 555 9999976421 111122344455555566665543
No 122
>4f4o_C Haptoglobin; globin fold, serine protease fold, complement control protei haemoglobin scavenging, oxygen storage-transport complex; HET: HEM NAG FUC; 2.90A {Sus scrofa}
Probab=99.18 E-value=2.2e-10 Score=118.07 Aligned_cols=193 Identities=16% Similarity=0.187 Sum_probs=120.0
Q ss_pred EEEEeeeeCCCCCCccccCC--CcceEEEEEEEeCCEEEecccccCCCC-----------eEEEEEcCCCcEEEEEEEEe
Q 009784 126 VKVFCVHTEPNFSLPWQRKR--QYSSSSSGFAIGGRRVLTNAHSVEHYT-----------QVKLKKRGSDTKYLATVLAI 192 (526)
Q Consensus 126 V~I~~~~~~~~~~~P~~~~~--~~~~~GSGfvI~~g~ILT~aHvV~~~~-----------~i~V~~~~~g~~~~a~vv~~ 192 (526)
-+|.++......++||+... .....|.|.+|++.||||+|||+.... ...+... ..+.+..+-+..
T Consensus 101 ~RIvGG~~a~~g~~Pw~v~l~~~~~~~CGGsLIs~~~VLTAAHCv~~~~~~~~~~~~~~~~~~~~~~-~~~~~~V~~i~~ 179 (347)
T 4f4o_C 101 QRIMGGSLDAKGSFPWQAKMISHHNLTSGATLINEQWLLTTAKNLRLGHKNDTKAKDIAPTLRLYVG-KKQEVEIEKVIF 179 (347)
T ss_dssp --CCSCCBCCSCCCTTCEEEECTTCCEEECCBCSSSEEEECHHHHTTTSCTTCCHHHHGGGCEEEET-TTEEECEEEEEE
T ss_pred CeEECCEECCCCCCCcEEEEEeCCCEEEEEEEEcCCEEEeCcccccCCCCCcceEEeeeeeeeecCC-CeEEEEEEEEEE
Confidence 46777777888889998743 234589999999999999999996322 1333332 455566666666
Q ss_pred ccC---CCeEEEEeccc-ccccCceeeecCCC--CcCCCcEEEEeeCCCCC------ceeEEEEEEeceeeeeccCC---
Q 009784 193 GTE---CDIAMLTVEDD-EFWEGVLPVEFGEL--PALQDAVTVVGYPIGGD------TISVTSGVVSRIEILSYVHG--- 257 (526)
Q Consensus 193 d~~---~DlAlLkv~~~-~~~~~~~pl~l~~~--~~~g~~V~~iG~p~~~~------~~sv~~GiVs~~~~~~~~~~--- 257 (526)
++. +||||||++.+ .+.+.+.|+.|... ...|...++.|+..... ...+..-+++...+.....+
T Consensus 180 HP~y~~nDIALlkL~~~v~~~~~v~PicLp~~~~~~~g~~~~v~GWG~~~~~~~s~~L~~~~v~iv~~~~C~~~~~~~~~ 259 (347)
T 4f4o_C 180 HPDNSTVDIGLIKLKQKVPVNERVMPICLPSKDYVNVGLVGYVSGWGRNANLNFTEHLKYVMLPVADQEKCVQYYEGSTV 259 (347)
T ss_dssp CSCTTTCCCEEEEESSCCCCSSSCCCCBCCSSCCCCTTCEEEEEECSBCTTSSBCSSCEEEEEEEECHHHHHHHHSSCSS
T ss_pred CcCCCCCCEEEEEECCCccCCCceeeeecCccccCCCCcEEEEeccccCCCCCCCccceEEEEEEeCHHHHHHHhccccc
Confidence 664 69999999876 34567888888643 34578888888864321 12344555554333211100
Q ss_pred --------------ceeeeEEEEc-----ccCCCCCCCCeeec---CCCe--EEEEEeeccccCccccccccccHHHHHH
Q 009784 258 --------------STELLGLQID-----AAINSGNSGGPAFN---DKGK--CVGIAFQSLKHEDVENIGYVIPTPVIMH 313 (526)
Q Consensus 258 --------------~~~~~~i~~d-----a~i~~G~SGGPlvn---~~G~--VVGI~~~~~~~~~~~~~~~aIP~~~i~~ 313 (526)
.....+|+.. ...+.|+|||||+- .+|+ ++||++.+..- +....+...-+...++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~iCAG~~~~~~d~C~GDSGGPLv~~~~~~~~~~lvGIvS~G~~C-~~~~pgVYTrVs~y~~ 338 (347)
T 4f4o_C 260 PEKKTPKSPVGVQPILNEHTFCAGLSKYQEDTCYGDAGSAFAVHDKDDDTWYAAGILSFDKSC-RTAEYGVYVRVTSILD 338 (347)
T ss_dssp GGGCCCCCSSSSCCCCSTTEEEECCCTTCCCCCTTCTTCEEEEEETTTTEEEEEEEEEECCCT-TTSSCEEEEEHHHHHH
T ss_pred cccccccccccccccccCCeEEecCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEEEeCCCC-CCCCCeEEEEHHHHHH
Confidence 0111245552 24689999999873 2443 99999876422 2222344555666677
Q ss_pred HHHHHHH
Q 009784 314 FIQDYEK 320 (526)
Q Consensus 314 ~l~~l~~ 320 (526)
+|++..+
T Consensus 339 WI~~~i~ 345 (347)
T 4f4o_C 339 WIQTTIA 345 (347)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 7766543
No 123
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=99.17 E-value=1.2e-10 Score=107.38 Aligned_cols=124 Identities=18% Similarity=0.216 Sum_probs=91.3
Q ss_pred ccccCceeeeccChhHHhhhcCCCCccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCCCC-cccccccchhhhhhh
Q 009784 327 FPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGT-VPFRHGERIGFSYLV 404 (526)
Q Consensus 327 ~~~LGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~~~-l~~~~~~~~~~~~~l 404 (526)
+++||+.+... ..|++|.+|.++|||++ ||++||+|++|||+++.++.+ +. ..+
T Consensus 15 ~~~lG~~~~~~--------------~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~----------~~~ 70 (166)
T 1w9e_A 15 DGKIGLRLKSI--------------DNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKA----------HKV 70 (166)
T ss_dssp TSCCSEEEEEE--------------TTEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHH----------HHH
T ss_pred CCcEeEEEEeC--------------CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHH----------HHH
Confidence 67999998865 26899999999999999 999999999999999999887 43 345
Q ss_pred hhcCCCCEEEEEEEECCEEEEEEEEecccccccCCCCCCCCCceEEEeeEEEEeccccceeeeeeeecc--hhhhccccc
Q 009784 405 SQKYTGDSAAVKVLRDSKILNFNITLATHRRLIPSHNKGRPPSYYIIAGFVFSRCLYLISVLSMERIMN--MKLRSSFWT 482 (526)
Q Consensus 405 ~~~~~G~~v~l~v~R~G~~~~~~v~l~~~~~~~p~~~~~~~p~~~i~gG~~f~~lt~~~~~~~~~~i~~--~~~~sg~~~ 482 (526)
.....|++++|+|.|+++.++++++... . .. -|+.+. .+ .+..+.+ .+.++|++.
T Consensus 71 ~~~~~~~~v~l~vr~~~~~~~v~l~~~~------~------~~----lG~~~~-----~g--~v~~v~~~s~a~~aGl~~ 127 (166)
T 1w9e_A 71 LKQAFGEKITMTIRDRPFERTITMHKDS------T------GH----VGFIFK-----NG--KITSIVKDSSAARNGLLT 127 (166)
T ss_dssp HHHCCSSEEEEEEECCTTCEEEEEECCT------T------SC----CSEEEE-----TT--EEEEECTTSHHHHTTCCS
T ss_pred HhcCCCCEEEEEEEcCCCcEEEEEecCC------C------Cc----EeEEEe-----CC--EEEEEccCCHHHHcCCCC
Confidence 5556788999999444487777765311 0 01 144443 12 3444444 456899999
Q ss_pred cceeeeecccchhhh
Q 009784 483 SSCIQCHNCQMSSLL 497 (526)
Q Consensus 483 ~~~~~~~~~~~~~~~ 497 (526)
||.|...|.+-....
T Consensus 128 GD~I~~ing~~v~~~ 142 (166)
T 1w9e_A 128 EHNICEINGQNVIGL 142 (166)
T ss_dssp SEEEEEETTEECTTC
T ss_pred CCEEEEECCEECCCC
Confidence 999999998766553
No 124
>2vnt_A Urokinase-type plasminogen activator; UPA, inhibitor complex, hydrolase; HET: QGG; 2.2A {Homo sapiens}
Probab=99.16 E-value=6.1e-10 Score=110.28 Aligned_cols=194 Identities=16% Similarity=0.179 Sum_probs=109.4
Q ss_pred EEEeeeeCCCCCCccccCC-------CcceEEEEEEEeCCEEEecccccCCC---CeEEEEEcC--------CCcEEEEE
Q 009784 127 KVFCVHTEPNFSLPWQRKR-------QYSSSSSGFAIGGRRVLTNAHSVEHY---TQVKLKKRG--------SDTKYLAT 188 (526)
Q Consensus 127 ~I~~~~~~~~~~~P~~~~~-------~~~~~GSGfvI~~g~ILT~aHvV~~~---~~i~V~~~~--------~g~~~~a~ 188 (526)
+|.++......++||+... .....|+|.+|++.||||+|||+.+. ..+.|.+.. .+..+..+
T Consensus 23 rIvgG~~a~~~~~Pw~v~l~~~~~~~~~~~~CgGsLIs~~~VLTAAHCv~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~ 102 (276)
T 2vnt_A 23 KIIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLMSPCWVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVE 102 (276)
T ss_dssp -CCSSEECCGGGSTTEEEEEEECSSSCEEEEEEEEEEETTEEEECGGGTTTCCCGGGEEEEESCCBSSSCCTTCEEEEEE
T ss_pred cEECCEECCCCCCCcEEEEEEecCCCcceeEEEEEEeeCCEEEECcccccCCCCCccEEEEeeeeeccCCCCceEEEEEE
Confidence 4555555566667776532 12347999999999999999999753 335555431 12345555
Q ss_pred EEEecc---------CCCeEEEEecccc-----cccCceeeecCCC---CcCCCcEEEEeeCCCCCc--------eeEEE
Q 009784 189 VLAIGT---------ECDIAMLTVEDDE-----FWEGVLPVEFGEL---PALQDAVTVVGYPIGGDT--------ISVTS 243 (526)
Q Consensus 189 vv~~d~---------~~DlAlLkv~~~~-----~~~~~~pl~l~~~---~~~g~~V~~iG~p~~~~~--------~sv~~ 243 (526)
-+..++ ..|||||+++... +...+.|+.|... ...+..+.+.|+...... ..+..
T Consensus 103 ~i~~Hp~y~~~~~~~~~Diall~L~~~~~~~~~~~~~v~picL~~~~~~~~~~~~~~~~g~G~~~~~~~~~~~~l~~~~~ 182 (276)
T 2vnt_A 103 NLILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVV 182 (276)
T ss_dssp EEEECTTCEECSSCEESCCEEEEEECTTSCCCCCCSSCCCCBCCCSSCCCCTTCEEEEEESCCSSTTCSCCCSBCEEEEE
T ss_pred EEEEccccccccccccchhhhhhhhccccccccCcccccccccccccccccccceEEEEEeeccccCCCCcchhheeeee
Confidence 555544 3699999997542 3445778777643 345778888887543211 12333
Q ss_pred EEEeceeeeeccCC--ceeeeEEEE-----cccCCCCCCCCeeecC-CC--eEEEEEeeccccCccccccccccHHHHHH
Q 009784 244 GVVSRIEILSYVHG--STELLGLQI-----DAAINSGNSGGPAFND-KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMH 313 (526)
Q Consensus 244 GiVs~~~~~~~~~~--~~~~~~i~~-----da~i~~G~SGGPlvn~-~G--~VVGI~~~~~~~~~~~~~~~aIP~~~i~~ 313 (526)
-+++...+...... ......+.. ....|.|+|||||+.. +| .++||++.+..-.....-+...-+...++
T Consensus 183 ~i~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~C~GDSGGPLv~~~~~~~~lvGIvS~G~~C~~~~~P~vyt~V~~y~~ 262 (276)
T 2vnt_A 183 KLISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLP 262 (276)
T ss_dssp EEECHHHHTSTTTTGGGSCTTEEEEECTTSCCCCCTTCTTCEEEEEETTEEEEEEEEEECSSSSBTTBCEEEEEGGGGHH
T ss_pred eEecHHHhhhhhccCcccCccceeeccCCCCCCCCCCCCCCeEEEeeCCeEEEEEEEEECCCCCCCCCCEEEEEHHHHHH
Confidence 44444333221111 001112222 1257899999999854 44 49999987653211122233344455566
Q ss_pred HHHHHHH
Q 009784 314 FIQDYEK 320 (526)
Q Consensus 314 ~l~~l~~ 320 (526)
+|++..+
T Consensus 263 WI~~~~~ 269 (276)
T 2vnt_A 263 WIRSHTK 269 (276)
T ss_dssp HHHHHHS
T ss_pred HHHHHhh
Confidence 6666543
No 125
>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate immunity, melanin, immune system binding complex; HET: NAG FUC; 2.00A {Holotrichia diomphalia}
Probab=99.14 E-value=4.6e-10 Score=117.70 Aligned_cols=194 Identities=15% Similarity=0.141 Sum_probs=117.3
Q ss_pred EEEee-eeCCCCCCccccCCC----------cceEEEEEEEeCCEEEecccccCCC----CeEEEEEcCC----------
Q 009784 127 KVFCV-HTEPNFSLPWQRKRQ----------YSSSSSGFAIGGRRVLTNAHSVEHY----TQVKLKKRGS---------- 181 (526)
Q Consensus 127 ~I~~~-~~~~~~~~P~~~~~~----------~~~~GSGfvI~~g~ILT~aHvV~~~----~~i~V~~~~~---------- 181 (526)
+|... ......++||+.... ....|.|.+|++.||||+|||+.+. ..+.|++...
T Consensus 129 rIvgG~~~a~~~e~PW~v~l~~~~~~~~~~~~~~~CGGsLIs~~~VLTAAHCv~~~~~~~~~~~V~~G~~~~~~~~~~~~ 208 (394)
T 2b9l_A 129 KITGQTNEAEYGEFPWMVAVLKANVIPGSGEEQLVCGGSLIAPSVVLTGAHCVNSYQSNLDAIKIRAGEWDTLTEKERLP 208 (394)
T ss_dssp EEESCSSBCCTTSSTTEEEEEECC------CCSEEEEEEEEETTEEEECHHHHGGGTTCGGGEEEEESCCBTTCCCSSSC
T ss_pred eeeCCccccCCCCCCcEEEEeeccccccccccceEeeEEEEeCCEEEeccceecCCCCCcccEEEEeceeeccCCcCCCc
Confidence 67766 566777888876421 2467999999999999999999753 4578877420
Q ss_pred CcEEEEEEEEeccC-------CCeEEEEecccc-cccCceeeecCCCC--cCCCcEEEEeeCCCCC---------ceeEE
Q 009784 182 DTKYLATVLAIGTE-------CDIAMLTVEDDE-FWEGVLPVEFGELP--ALQDAVTVVGYPIGGD---------TISVT 242 (526)
Q Consensus 182 g~~~~a~vv~~d~~-------~DlAlLkv~~~~-~~~~~~pl~l~~~~--~~g~~V~~iG~p~~~~---------~~sv~ 242 (526)
...+..+-+..++. +||||||++.+. +.+.+.|+.|.... ..+..+++.||..... ...+.
T Consensus 209 ~~~~~V~~ii~Hp~y~~~~~~nDIALL~L~~pv~~~~~v~PicLp~~~~~~~~~~~~v~GWG~t~~~~~~~~s~~L~~~~ 288 (394)
T 2b9l_A 209 YQERKIRQVIIHSNFNPKTVVNDVALLLLDRPLVQADNIGTICLPQQSQIFDSTECFASGWGKKEFGSRHRYSNILKKIQ 288 (394)
T ss_dssp CEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCBCCTTCCCCBCCCTTCCCCCSCEEEEECCTTTTTCTTSSCCBCEEEE
T ss_pred cEEEEEEEEEECCCCCCCccccceEEEEecCccccCCceeeeEcCCcccCccCCEEEEEeccCccCCCCCcccccceEEE
Confidence 12344444555543 699999998763 44568888887533 2467899999864321 12234
Q ss_pred EEEEeceeeeecc-C---C---ceeeeEEEEc----ccCCCCCCCCeeecC----CC--eEEEEEeeccccCcccccccc
Q 009784 243 SGVVSRIEILSYV-H---G---STELLGLQID----AAINSGNSGGPAFND----KG--KCVGIAFQSLKHEDVENIGYV 305 (526)
Q Consensus 243 ~GiVs~~~~~~~~-~---~---~~~~~~i~~d----a~i~~G~SGGPlvn~----~G--~VVGI~~~~~~~~~~~~~~~a 305 (526)
.-+++...+.... . + .....+|+.. ...+.|+|||||+.. +| .++||++.+..-.....-+..
T Consensus 289 v~iv~~~~C~~~~~~~~~~~~~~i~~~~iCAg~~~g~d~C~GDSGGPLv~~~~~~~~~~~lvGIvS~G~~C~~~~~PgVY 368 (394)
T 2b9l_A 289 LPTVDRDKCQADLRNTRLGLKFVLDQTFVCAGGEQGKDTCTGDGGSPLFCPDPRNPSRYMQMGIVAWGIGCGDENVPGVY 368 (394)
T ss_dssp ECEECHHHHHHHHHTTTTCTTCCCCTTEEEECCBSSCSCCSSCTTCEEEEEETTEEEEEEEEEEESCTTCCCBSSSCEEE
T ss_pred EEEECHHHHHHHHhhcccccceecCCCEEEeeCCCCCcCCCCCcchhhEEEEcCCCCeEEEEEEEEECCCCCCCCCCeEE
Confidence 4455543332111 0 0 1111245553 367899999999853 23 699999876532111122333
Q ss_pred ccHHHHHHHHHHHHH
Q 009784 306 IPTPVIMHFIQDYEK 320 (526)
Q Consensus 306 IP~~~i~~~l~~l~~ 320 (526)
.-+...+++|++..+
T Consensus 369 T~V~~y~~WI~~~i~ 383 (394)
T 2b9l_A 369 ANVAHFRNWIDQEMQ 383 (394)
T ss_dssp EEGGGGHHHHHHHHH
T ss_pred EEHHHhHHHHHHHHH
Confidence 444445555555443
No 126
>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1
Probab=99.13 E-value=3e-10 Score=118.97 Aligned_cols=190 Identities=17% Similarity=0.186 Sum_probs=115.7
Q ss_pred EEEeeeeCCCCCCccccCCCcceEEEEEEEeCCEEEecccccCCC-------CeEEEEEcCC-------CcEEEEEEEEe
Q 009784 127 KVFCVHTEPNFSLPWQRKRQYSSSSSGFAIGGRRVLTNAHSVEHY-------TQVKLKKRGS-------DTKYLATVLAI 192 (526)
Q Consensus 127 ~I~~~~~~~~~~~P~~~~~~~~~~GSGfvI~~g~ILT~aHvV~~~-------~~i~V~~~~~-------g~~~~a~vv~~ 192 (526)
+|.........++||+........|.|.+|++.||||+|||+.+. ..+.|.+... ...+..+-+..
T Consensus 157 rIvgG~~a~~~~~Pw~v~l~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~v~~i~~ 236 (399)
T 1gpz_A 157 QIIGGQKAKMGNFPWQVFTNIHGRGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVFLGHTNVEELMKLGNHPIRRVSV 236 (399)
T ss_dssp CCCSCEECCTTSSTTEEEEESSSEEEEEEETTTEEEECGGGTSCTTC-----CCCEEEESCSBHHHHHHTCCCCEEEEEE
T ss_pred EEECCEECCCCCCCCEEEECCCCCeEEEEeCCCEEEeChhcccccccccCCcceEEEEeccccccccccccccceEEEEE
Confidence 677777788889999986555567999999999999999999743 2356666421 11233333444
Q ss_pred cc----------CCCeEEEEecccc-cccCceeeecCCCC---cCCCcEEEEeeCCCCC-----ceeEEEEEEeceeeee
Q 009784 193 GT----------ECDIAMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGD-----TISVTSGVVSRIEILS 253 (526)
Q Consensus 193 d~----------~~DlAlLkv~~~~-~~~~~~pl~l~~~~---~~g~~V~~iG~p~~~~-----~~sv~~GiVs~~~~~~ 253 (526)
++ .+||||||++.+. +...+.|+.|.... ..+..+++.||..... ...+..-+++...+..
T Consensus 237 Hp~y~~~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~~~i~~~~~C~~ 316 (399)
T 1gpz_A 237 HPDYRQDESYNFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKIAHDLRFVRLPVANPQACEN 316 (399)
T ss_dssp CSSCCSSSSSCCTTCCEEEEESSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECC-----CCSBCEEEEEEEECHHHHHC
T ss_pred CCCCCcCCCCCCCCcEEEEEECCcCcCCCceeeeecCCCccccCCCCEEEEEccCCCCCccCccceEEEEEEcCHHHhhh
Confidence 43 2599999998763 45568888887543 3578889999864321 1234444554433322
Q ss_pred ccCC-----ceeeeEEEEc-----ccCCCCCCCCeeecC---CC--eEEEEEeeccccCccccccccccHHHHHHHHHHH
Q 009784 254 YVHG-----STELLGLQID-----AAINSGNSGGPAFND---KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDY 318 (526)
Q Consensus 254 ~~~~-----~~~~~~i~~d-----a~i~~G~SGGPlvn~---~G--~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l 318 (526)
.... .....+|+.. ...+.|+|||||+.. +| .++||++.+..-. .+.+...-+....++|++.
T Consensus 317 ~~~~~~~~~~~~~~~~Cag~~~~~~d~C~GDSGGPl~~~~~~~~~~~l~GivS~g~~C~--~~~~vyt~V~~y~~WI~~~ 394 (399)
T 1gpz_A 317 WLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCS--RGYGFYTKVLNYVDWIKKE 394 (399)
T ss_dssp -----------CCSEEEEECGGGGGGGGCSCSSCEEEEEETTTTEEEEEEEECCCTTTT--TTEEEEEEGGGGHHHHHHH
T ss_pred hhhcccccCcCCCCeEecccCCCCCccCCCCCchHeEEEECCCCeEEEEEEEEeCCCcC--CCCeEEEEhHHhHHHHHHH
Confidence 1110 0111245552 357899999999843 34 5899998765221 1234444455555555554
No 127
>3cp7_A Alkaline serine protease Al20; trypsin-like, hydrolase; 1.39A {Nesterenkonia abyssinica}
Probab=99.13 E-value=9.6e-10 Score=105.84 Aligned_cols=162 Identities=15% Similarity=0.067 Sum_probs=92.8
Q ss_pred ceEEEEEEEe---CCEEEecccccCCC------CeEEEEEcCC-----CcEEEEEEEEec--------cCCCeEEEEecc
Q 009784 148 SSSSSGFAIG---GRRVLTNAHSVEHY------TQVKLKKRGS-----DTKYLATVLAIG--------TECDIAMLTVED 205 (526)
Q Consensus 148 ~~~GSGfvI~---~g~ILT~aHvV~~~------~~i~V~~~~~-----g~~~~a~vv~~d--------~~~DlAlLkv~~ 205 (526)
...|+|.+|+ +.+|||+|||+.+. ..+.|..... ...+..+-+..+ ..+||||||++.
T Consensus 20 ~~~CgGslI~s~s~~~VLTAAHC~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~v~~~~~hp~y~~~~~~~~DiAll~L~~ 99 (218)
T 3cp7_A 20 DFVCSANIVASANQSTVATAGHCLHDGNGGQFARNFVFAPAYDYGESEHGVWAAEELVTSAEWANRGDFEHDYAFAVLET 99 (218)
T ss_dssp EEEEEEEEBCCTTSCEEEECGGGTBCCTTCBBCEEEEEEETCSSSCCTTCCEEEEEEEECHHHHHHCCGGGCCEEEEECC
T ss_pred CeEEEEEEEecCCCCEEEEChHhcCcCCCCeeecCEEEECcccCCCCCccEEEEEEEEECcccccCCCCcCCEEEEEEeC
Confidence 3679999999 89999999999753 2455554311 113444434333 347999999998
Q ss_pred c---ccccCce-eeecCCCCcCCCcEEEEeeCCCCCceeEEEEEEeceeeee--ccC--CceeeeEEEEcccCCCCCCCC
Q 009784 206 D---EFWEGVL-PVEFGELPALQDAVTVVGYPIGGDTISVTSGVVSRIEILS--YVH--GSTELLGLQIDAAINSGNSGG 277 (526)
Q Consensus 206 ~---~~~~~~~-pl~l~~~~~~g~~V~~iG~p~~~~~~sv~~GiVs~~~~~~--~~~--~~~~~~~i~~da~i~~G~SGG 277 (526)
+ .+.+.+. ++.+......|..+.+.||+......... . ..+.. +.. ......++ |+.+.|+|||
T Consensus 100 ~~~~~~~~~v~~~~~l~~~~~~g~~~~v~GwG~~~~~~~~~---l--~~C~~~~~~~~~~~~~~~~~---Ca~~~GDSGG 171 (218)
T 3cp7_A 100 KGGTTVQQQVGTASPIAFNQPRGQYYSAYGYPAAAPFNGQE---L--HSCHGTATNDPMGSSTQGIP---CNMTGGSSGG 171 (218)
T ss_dssp BTTBCHHHHHSCCBCBCCSCCSSCEEEEEECCCSTTCCSSS---C--EEEEEECEECTTSSSCEEEE---CCCCTTCTTC
T ss_pred CCCcChhHhcCcccceeecCCCCCEEEEEeCCCCCCCCCce---e--eEeeeeEEcCCCCCceEEec---CCCCCCCcCC
Confidence 6 2333344 56665433467889999998643110000 0 01110 000 11111223 3346899999
Q ss_pred eeecC---CCeEEEEEeeccccCcccccccccc-HHHHHHHHHHHH
Q 009784 278 PAFND---KGKCVGIAFQSLKHEDVENIGYVIP-TPVIMHFIQDYE 319 (526)
Q Consensus 278 Plvn~---~G~VVGI~~~~~~~~~~~~~~~aIP-~~~i~~~l~~l~ 319 (526)
||+.. .++++||++.+... .....|.-. -+.++.++++..
T Consensus 172 Plv~~~~g~~~lvGIvS~G~gc--~~~~~~~p~~~~~~~~l~~~a~ 215 (218)
T 3cp7_A 172 PWFLGNGTGGAQNSTNSYGYTF--LPNVMFGPYFGSGAQQNYNYAS 215 (218)
T ss_dssp EEEESSSSSSCEEEECCEEETT--EEEEEEECCCCHHHHHHHHHHT
T ss_pred eeEEccCCCeEEEEEEccccCC--CCCcEEcCcCCHHHHHHHHHHH
Confidence 99975 37899999876522 122233322 255666666543
No 128
>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1
Probab=99.12 E-value=4.1e-10 Score=115.21 Aligned_cols=189 Identities=16% Similarity=0.092 Sum_probs=112.5
Q ss_pred EEEeeeeCCCCCCccccCCCcceEEEEEEEeCCEEEecccccCCCCeEEEEEcCC------CcEEEE---EEEEecc---
Q 009784 127 KVFCVHTEPNFSLPWQRKRQYSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGS------DTKYLA---TVLAIGT--- 194 (526)
Q Consensus 127 ~I~~~~~~~~~~~P~~~~~~~~~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~~------g~~~~a---~vv~~d~--- 194 (526)
+|.++......++||+.... ...|+|.+|++.||||+|||+.+.....|.+... ...+.. +-+..++
T Consensus 82 rIvgG~~a~~~~~Pw~v~l~-~~~CgGsLIs~~~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~~v~~v~~i~~Hp~y~ 160 (333)
T 1elv_A 82 RIIGGSDADIKNFPWQVFFD-NPWAGGALINEYWVLTAAHVVEGNREPTMYVGSTSVQTSRLAKSKMLTPEHVFIHPGWK 160 (333)
T ss_dssp -CBTCEECCGGGSTTEEEEE-TTEEEEEEEETTEEEECHHHHTTCSSCCEECSCSBCC-------CEECEEEEEECTTSC
T ss_pred eeecCcccCCCCcCeEEEec-CCceeEEEecCCEEEehhheeCCCCCCeEEEeeeecccCccceeeeeccceEEECCCCc
Confidence 46666667777889988653 2379999999999999999998655445554211 111222 3333332
Q ss_pred -----------CCCeEEEEecccc-cccCceeeecCCCC-----cCCCcEEEEeeCCCCC------ceeEEEEEEeceee
Q 009784 195 -----------ECDIAMLTVEDDE-FWEGVLPVEFGELP-----ALQDAVTVVGYPIGGD------TISVTSGVVSRIEI 251 (526)
Q Consensus 195 -----------~~DlAlLkv~~~~-~~~~~~pl~l~~~~-----~~g~~V~~iG~p~~~~------~~sv~~GiVs~~~~ 251 (526)
.+||||||++.+. +...+.|+.|.... ..++.+++.||..... ...+..-+++...+
T Consensus 161 ~~~~~~~~~~~~nDIALl~L~~~v~~~~~v~PicLp~~~~~~~~~~g~~~~v~GWG~t~~~~~~~~L~~~~v~v~~~~~C 240 (333)
T 1elv_A 161 LLAVPEGRTNFDNDIALVRLKDPVKMGPTVSPICLPGTSSDYNLMDGDLGLISGWGRTEKRDRAVRLKAARLPVAPLRKC 240 (333)
T ss_dssp CCSSCTTCCCCTTCCEEEEESSCCCCBTTBCCCBCCCSSGGGCCCTTCEEEEEESCCCSSCSSCSBCEEEEEEEECHHHH
T ss_pred ccccccccCCCcceEEEEEeCCCCcCCCcccceecCCCcccccccCCcEEEEEECcCcCCCCcCceeEEEEEEEEcHHHh
Confidence 3699999999763 44568888887533 2378899999865321 11233344443333
Q ss_pred eeccCC---------ceeeeEEEEc----ccCCCCCCCCeeecC---CC---eEEEEEeeccccCccccccccccHHHHH
Q 009784 252 LSYVHG---------STELLGLQID----AAINSGNSGGPAFND---KG---KCVGIAFQSLKHEDVENIGYVIPTPVIM 312 (526)
Q Consensus 252 ~~~~~~---------~~~~~~i~~d----a~i~~G~SGGPlvn~---~G---~VVGI~~~~~~~~~~~~~~~aIP~~~i~ 312 (526)
...... .....+|+.. ...+.|+|||||+.. +| .++||++.+..-. . .+...-+....
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~Cag~~~~~~~C~GDSGGPL~~~~~~~~~~~~l~GIvS~g~~C~-~--~~vyt~V~~y~ 317 (333)
T 1elv_A 241 KEVKVEKPTADAEAYVFTPNMICAGGEKGMDSCKGDSGGAFAVQDPNDKTKFYAAGLVSWGPQCG-T--YGLYTRVKNYV 317 (333)
T ss_dssp HTC----------CCCCCTTEEEEECSTTCBCCTTCTTCEEEEECSSCTTCEEEEEEEEECSSTT-S--EEEEEEGGGGH
T ss_pred hhhhhcccccccccccCCCCeECccCCCCCCcCcCcCCCceEEEECCCCcEEEEEEEEeeCCCCC-C--CcEEeEHHHHH
Confidence 211100 1111245553 357899999999863 24 4999998764221 1 34445555555
Q ss_pred HHHHHHH
Q 009784 313 HFIQDYE 319 (526)
Q Consensus 313 ~~l~~l~ 319 (526)
++|++..
T Consensus 318 ~WI~~~~ 324 (333)
T 1elv_A 318 DWIMKTM 324 (333)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6665544
No 129
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=99.12 E-value=4.5e-10 Score=114.03 Aligned_cols=182 Identities=16% Similarity=0.083 Sum_probs=109.2
Q ss_pred CCCCCccccCC---CcceEEEEEEEeCCEEEecccccCCCCeEEEEEcC-----CCcEEEEEEEEecc-------CCCeE
Q 009784 135 PNFSLPWQRKR---QYSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRG-----SDTKYLATVLAIGT-------ECDIA 199 (526)
Q Consensus 135 ~~~~~P~~~~~---~~~~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~-----~g~~~~a~vv~~d~-------~~DlA 199 (526)
...++||+... .....|+|.+|++.||||+|||+.+...+.|.+.. .+..+..+-+..++ .+|||
T Consensus 101 ~~~~~Pw~v~l~~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIA 180 (317)
T 3h5c_B 101 DLQDLPWQVKLTNSEGKDFCGGVIIRENFVLTTAKCSLLHRNITVKTYFNRTSQDPLMIKITHVHVHMRYDADAGENDLS 180 (317)
T ss_dssp CTTCCTTEEEEECSSSCEEEEEEEEETTEEEECHHHHHSCSSCEEEECTTSCTTSCEEEEEEEEEECTTCBTTTTBSCCE
T ss_pred ccCCCCcEEEEeccCCceeeeeEEeeCCEEEEChHhcCcCCceEEEEeeecCCCCcEEEEeeEEEECCCCCCCCCCCCeE
Confidence 34456776543 23467999999999999999999877778887742 23445555555655 36999
Q ss_pred EEEecccc-cccCceeeecCCCC------cCCCcEEEEeeCCCCC-----ceeEEEEEEeceeeeeccCCceeeeEEEEc
Q 009784 200 MLTVEDDE-FWEGVLPVEFGELP------ALQDAVTVVGYPIGGD-----TISVTSGVVSRIEILSYVHGSTELLGLQID 267 (526)
Q Consensus 200 lLkv~~~~-~~~~~~pl~l~~~~------~~g~~V~~iG~p~~~~-----~~sv~~GiVs~~~~~~~~~~~~~~~~i~~d 267 (526)
|||++.+. +...+.|+.|.... ..++.+++.||..... ...+..-+++...+...........++...
T Consensus 181 Ll~L~~pv~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~v~~~~~~~C~~~~~~~~~~~~~Ca~ 260 (317)
T 3h5c_B 181 LLELEWPIQCPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWARNGTDLGNSLTTRPVTLVEGEECGQVLNVTVTTRTYCER 260 (317)
T ss_dssp EEEESSCCCTTTSCCCCBCCCHHHHHHTTTTTSCEEEEBCCTTCCSSSCCCBCCEEEEECHHHHHHHHTCCCCTTEEEEE
T ss_pred EEEeCCcccCCCCccceeCCCcccccccccCCCeEEEEecCCCCCCCCccceEEEEEEECHHHHhhhhcCcCCCceeECC
Confidence 99998763 44567888887532 3578899999864211 112344445443332211111111234442
Q ss_pred --ccCCCCCCCCeeecC-CCe--EEEEEeeccccCccccccccccHHHHHHHHHH
Q 009784 268 --AAINSGNSGGPAFND-KGK--CVGIAFQSLKHEDVENIGYVIPTPVIMHFIQD 317 (526)
Q Consensus 268 --a~i~~G~SGGPlvn~-~G~--VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~ 317 (526)
.....|+|||||+.. +|+ ++||++.+.. ......+....+...+++|++
T Consensus 261 ~~~~~~~gDsGgPl~~~~~~~~~l~Gi~S~g~~-~~~~~p~vyt~V~~y~~WI~~ 314 (317)
T 3h5c_B 261 SSVAAMHWMDGSVVTREHRGSWFLTGVLGSQPV-GGQAHMVLVTKVSRYSLWFKQ 314 (317)
T ss_dssp CSCCCCCCCTTCEEEEEETTEEEEEEEECCCCS-SCCTTEEEEEEGGGCHHHHHH
T ss_pred CCCCCcCCCCCCCEEEecCCEEEEEEEEEECCC-CCCCcceEEEEhHHhHHHHHH
Confidence 345579999999864 555 9999975421 111122333444444455544
No 130
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=99.12 E-value=3.3e-11 Score=99.06 Aligned_cols=68 Identities=16% Similarity=0.248 Sum_probs=59.2
Q ss_pred cceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEEEEEEEEe
Q 009784 353 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITL 430 (526)
Q Consensus 353 ~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~~~~~v~l 430 (526)
.|+.|..+.|+|||++ ||++||+|++|||++|.++.++. ..+....+|++++|+|+|+|+..++++++
T Consensus 19 ~G~~V~~~~~~s~A~~aGl~~GD~I~~ing~~v~~~~d~~----------~~~~~~~~g~~v~l~v~R~g~~~~~~v~l 87 (87)
T 2i6v_A 19 LGYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDPNVMN----------TLFQSMNEMTEMSLTVERDGQQHDVYIQF 87 (87)
T ss_dssp EEEEEEECSCHHHHHHTTCCTTCEEEEETTEETTCHHHHH----------HHHHTGGGCSEEEEEEEETTEEEEEEEEC
T ss_pred EEEEEEeCCCCCHHHHCCCCCCCEEEEECCEECCCHHHHH----------HHHHhcCCCCEEEEEEEECCEEEEEEEEC
Confidence 5888999999999999 99999999999999999988864 56665567999999999999998887764
No 131
>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase, innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila melanogaster}
Probab=99.12 E-value=1.1e-09 Score=115.44 Aligned_cols=166 Identities=19% Similarity=0.172 Sum_probs=101.0
Q ss_pred EEeeeeCCCCCCccccCCC------cceEEEEEEEeCCEEEecccccCCC--CeEEEEEcCC------------------
Q 009784 128 VFCVHTEPNFSLPWQRKRQ------YSSSSSGFAIGGRRVLTNAHSVEHY--TQVKLKKRGS------------------ 181 (526)
Q Consensus 128 I~~~~~~~~~~~P~~~~~~------~~~~GSGfvI~~g~ILT~aHvV~~~--~~i~V~~~~~------------------ 181 (526)
|..+......++||+.... ....|.|.+|++.||||+|||+.+. ..+.|++...
T Consensus 119 IvgG~~a~~~e~Pw~v~L~~~~~g~~~~~CGGsLIs~~~VLTAAHCv~~~~~~~~~V~lG~~~~~~~~~~~~~~~~~~c~ 198 (408)
T 2xxl_A 119 VSNGYEVKLSSRPWMALLRYQQFGESRFLCGGAMISERYILTAAHCVHGLQNDLYEIRLGEHRISTEEDCRQQGRKKKCA 198 (408)
T ss_dssp CCSSCBCCTTSSTTEEEEEEECSSSEEEEEEEEEEETTEEEECGGGTTTCTTTEEEEEESCSBTTCSCCEEEETTEEEEC
T ss_pred eECCEECCCCCCCcEEEEEeecCCceeEEEEEEEEECCEEEEcHHhcCCCCCceEEEEeeeeECCCccchhhcccccccC
Confidence 3334444455566654321 2457999999999999999999754 4677776421
Q ss_pred --CcEEEEEEEEecc-------CCCeEEEEecccc-cccCceeeecCCCC------cCCCcEEEEeeCCCCC------ce
Q 009784 182 --DTKYLATVLAIGT-------ECDIAMLTVEDDE-FWEGVLPVEFGELP------ALQDAVTVVGYPIGGD------TI 239 (526)
Q Consensus 182 --g~~~~a~vv~~d~-------~~DlAlLkv~~~~-~~~~~~pl~l~~~~------~~g~~V~~iG~p~~~~------~~ 239 (526)
...+..+-+..++ .+||||||++.+. +.+.+.|+.|.... ..+..+++.||..... ..
T Consensus 199 ~~~~~~~V~~ii~Hp~y~~~~~~nDIALL~L~~~v~~~~~V~PICLp~~~~~~~~~~~~~~~~v~GWG~t~~~~~s~~L~ 278 (408)
T 2xxl_A 199 PPVVNVGIEKHLIHEKYDARHIMHDIALLKLNRSVPFQKHIKPICLPITDELKEKAEQISTYFVTGWGTTENGSSSDVLL 278 (408)
T ss_dssp CCCEEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCCBTTBCCCBCCCSHHHHHHTTTCSEEEEEECCCBTTBCSCSBCE
T ss_pred CceEEEeEEEEEeCCCCCccccccceEEEEECCccccccCccccCCCCcccccccccCCCEEEEEEeCcCCCCCCCchhe
Confidence 1123333344444 3699999998763 45568888887532 3578889999865321 12
Q ss_pred eEEEEEEeceeeeeccCCceeeeEEEEc----ccCCCCCCCCee------ecC-CC--eEEEEEeec
Q 009784 240 SVTSGVVSRIEILSYVHGSTELLGLQID----AAINSGNSGGPA------FND-KG--KCVGIAFQS 293 (526)
Q Consensus 240 sv~~GiVs~~~~~~~~~~~~~~~~i~~d----a~i~~G~SGGPl------vn~-~G--~VVGI~~~~ 293 (526)
.+..-+++...+............++.. ...+.|+||||| +.. +| .++||++.+
T Consensus 279 ~~~v~iv~~~~C~~~~~~~~~~~~iCAg~~~g~d~C~GDSGGPL~~~~~~~~~~~~~~~l~GIvS~G 345 (408)
T 2xxl_A 279 QANVPLQPRSACSQAYRRAVPLSQLCVGGGDLQDSCKGDSGGPLQAPAQYLGEYAPKMVEFGIVSQG 345 (408)
T ss_dssp EEEEEEECHHHHHHHHTSCCCTTEEEECCSCSSSGGGSCTTCEEEEEECCTTCSSCEEEEEEEEEEC
T ss_pred EeeeeecCHHHHHHHhcccCCCceEeecCCCCCccCCCcccChhhcCccceEEECCEEEEEEEEEEC
Confidence 2334444443332211111111345553 356789999999 543 34 689999876
No 132
>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine protease, zymogen; HET: NAG; 2.20A {Homo sapiens}
Probab=99.10 E-value=1.4e-10 Score=122.71 Aligned_cols=168 Identities=17% Similarity=0.106 Sum_probs=107.1
Q ss_pred EEEeeeeCCCCCCccccCCC----cceEEEEEEEeCCEEEecccccC--------CCCeEEEEEcCC---------CcEE
Q 009784 127 KVFCVHTEPNFSLPWQRKRQ----YSSSSSGFAIGGRRVLTNAHSVE--------HYTQVKLKKRGS---------DTKY 185 (526)
Q Consensus 127 ~I~~~~~~~~~~~P~~~~~~----~~~~GSGfvI~~g~ILT~aHvV~--------~~~~i~V~~~~~---------g~~~ 185 (526)
+|.++.......+||+.... ....|+|.+|++.||||+|||+. ....+.|.+... .+.+
T Consensus 165 RIvgG~~a~~g~~Pw~v~l~~~~~~~~~CGGsLIs~~~VLTAAHCv~~~~~~~~~~~~~~~V~lG~~~~~~~~~~~~~~~ 244 (424)
T 3nxp_A 165 RIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKIS 244 (424)
T ss_dssp CCCCCEECCTTSCTTEEEEEETTTTEEEEEEEESSSSEEEECHHHHEEGGGTEECCGGGEEEEESCCBSSSCCTTTCEEE
T ss_pred eeECCEECCCCCCCCEEEEeecCCCCccceeEEEcCCEEEEhHHhcCccccccccCcccEEEEeCcccccccCCCceeEE
Confidence 67788888888999987542 34579999999999999999984 234577776421 1122
Q ss_pred EEEEEEecc--------CCCeEEEEecccc-cccCceeeecCCCC------cCCCcEEEEeeCCC-------------CC
Q 009784 186 LATVLAIGT--------ECDIAMLTVEDDE-FWEGVLPVEFGELP------ALQDAVTVVGYPIG-------------GD 237 (526)
Q Consensus 186 ~a~vv~~d~--------~~DlAlLkv~~~~-~~~~~~pl~l~~~~------~~g~~V~~iG~p~~-------------~~ 237 (526)
..+-+..++ .+||||||++.+. +...+.|+.|.... ..|..+++.||... ..
T Consensus 245 ~V~~ii~Hp~y~~~~~~~nDIALLkL~~pv~~s~~v~PicLp~~~~~~~~~~~g~~~~v~GWG~t~~~~~~~~~~~~~~~ 324 (424)
T 3nxp_A 245 MLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSV 324 (424)
T ss_dssp CEEEEEECTTCBTTTTSBTCCEEEEESSCCCCCSSCCCCBCCCHHHHHHHHHHCSEEEEEESSHHHHHHHHC----CCSB
T ss_pred EEEEEEeCCCCCCCCCCcCCeEEEEecCccccCCcccccCCCCcccccccccCCCeEEEEecCCCCccCccccCCCCCcc
Confidence 333344443 3699999998763 45568888887532 24788999998631 01
Q ss_pred ceeEEEEEEeceeeeeccCCceeeeEEEEc--------ccCCCCCCCCeeecC---CC--eEEEEEeecc
Q 009784 238 TISVTSGVVSRIEILSYVHGSTELLGLQID--------AAINSGNSGGPAFND---KG--KCVGIAFQSL 294 (526)
Q Consensus 238 ~~sv~~GiVs~~~~~~~~~~~~~~~~i~~d--------a~i~~G~SGGPlvn~---~G--~VVGI~~~~~ 294 (526)
...+..-+++...+...........+|+.. ...+.|+|||||+.. +| .++||++.+.
T Consensus 325 L~~~~v~ii~~~~C~~~~~~~i~~~~iCAg~~~~~~~~~d~C~GDSGGPLv~~~~~~~~~~l~GIvS~G~ 394 (424)
T 3nxp_A 325 LQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGE 394 (424)
T ss_dssp CEEEEEEBCCHHHHHHTCSSCCCTTEEEESCCCBTTBCCCTTCSCTTCEEEEECTTTCCEEEEEEECCSS
T ss_pred ceEEEeeEEcHHHhhhhccCcCCCCeEecccCCCCCCCCccCCCcCCCceEEEECCCCcEEEEEEEEeCC
Confidence 112333344433332221111122356652 267899999999853 34 6999998765
No 133
>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A
Probab=99.03 E-value=1.8e-09 Score=122.22 Aligned_cols=193 Identities=19% Similarity=0.198 Sum_probs=119.4
Q ss_pred EEEeeeeCCCCCCccccCCC---cceEEEEEEEeCCEEEecccccCCC---CeEEEEEcC--------CCcEEEEEEEEe
Q 009784 127 KVFCVHTEPNFSLPWQRKRQ---YSSSSSGFAIGGRRVLTNAHSVEHY---TQVKLKKRG--------SDTKYLATVLAI 192 (526)
Q Consensus 127 ~I~~~~~~~~~~~P~~~~~~---~~~~GSGfvI~~g~ILT~aHvV~~~---~~i~V~~~~--------~g~~~~a~vv~~ 192 (526)
+|.++......++||+.... ....|+|.+|++.+|||+|||+.+. ..+.|.+.. ..+.+...-+..
T Consensus 561 RIvGG~~a~~~~~PW~VsL~~~~~~~~CGGSLIs~~wVLTAAHCv~~~~~~~~~~V~lG~~~~~~~~~~~q~~~V~~i~~ 640 (791)
T 4dur_A 561 RVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLEKSPRPSSYKVILGAHQEVNLEPHVQEIEVSRLFL 640 (791)
T ss_dssp TCTTCEECCTTSSTTEEEEECTTSCEEEEEEEEETTEEEECGGGGSSCCCGGGCEEEESCCBSSSCCTTCEEEEEEEEEE
T ss_pred ceECCEECCCCCCCeEEEEEecCCCeEEEEEEEeCCEEEECHHHcCCcCCCceEEEEeccccccCCCCccEEEEEEEEEC
Confidence 57777778888899987543 3467999999999999999999753 346676632 112344444444
Q ss_pred cc-CCCeEEEEecccc-cccCceeeecCCCC---cCCCcEEEEeeCCCCC------ceeEEEEEEeceeeeec--cCCce
Q 009784 193 GT-ECDIAMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGD------TISVTSGVVSRIEILSY--VHGST 259 (526)
Q Consensus 193 d~-~~DlAlLkv~~~~-~~~~~~pl~l~~~~---~~g~~V~~iG~p~~~~------~~sv~~GiVs~~~~~~~--~~~~~ 259 (526)
++ ..||||||++.+. +...+.|+.|.... ..+..+++.||..... ...+..-+++...+... ..+..
T Consensus 641 hp~~nDIALLkL~~pv~~s~~V~PIcLP~~~~~~~~g~~~~vsGWG~t~~~~~s~~L~~~~v~ii~~~~C~~~~~~~~~i 720 (791)
T 4dur_A 641 EPTRKDIALLKLSSPAVITDKVIPACLPSPNYVVADRTECFITGWGETQGTFGAGLLKEAQLPVIENKVCNRYEFLNGRV 720 (791)
T ss_dssp CTTCCSCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEECCCC---CCTTBCEEEEEEEECHHHHTSTTTTTTCC
T ss_pred CCCCCceEEEEecCccccCCceeeeeccCcccccCCCCEEEEEEeCCCCCCCCCCeeEEEEEEEeCHHHhhcccccCCCC
Confidence 44 4799999998763 45568888886432 3478899999865321 12344555554433221 11112
Q ss_pred eeeEEEEc-----ccCCCCCCCCeeecC-CC--eEEEEEeeccccCccccccccccHHHHHHHHHHHH
Q 009784 260 ELLGLQID-----AAINSGNSGGPAFND-KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYE 319 (526)
Q Consensus 260 ~~~~i~~d-----a~i~~G~SGGPlvn~-~G--~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l~ 319 (526)
...+|+.. ...+.|+|||||+.. +| .++||++.+..-.....-+...-+.....+|++..
T Consensus 721 ~~~~iCAg~~~gg~daC~GDSGGPLv~~~~~~~~LvGIvS~G~gC~~~~~PgVYTrVs~y~dWI~~~i 788 (791)
T 4dur_A 721 QSTELCAGHLAGGTDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCARPNKPGVYVRVSRFVTWIEGVM 788 (791)
T ss_dssp CTTEEEESCSSSCCCBCCSCTTCEEEEEETTEEEEEEECCTTTCCBBTTBCEEEEEGGGTHHHHHHHH
T ss_pred CCCeEEeccCCCCCCCCCCCcccceEEEeCCeEEEEEEEEeCCCCCCCCCCeEEEEHHHHHHHHHHHH
Confidence 22345552 356889999999864 33 59999987653211122344444555555555543
No 134
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.02 E-value=4.9e-11 Score=103.49 Aligned_cols=91 Identities=14% Similarity=0.202 Sum_probs=71.0
Q ss_pred HHcCceeecccc----CceeeeccChhHHhhhcCCC---CccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCCCCc
Q 009784 319 EKNGAYTGFPLL----GVEWQKMENPDLRVAMSMKA---DQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTV 390 (526)
Q Consensus 319 ~~~g~~~~~~~L----Gi~~~~~~~~~~~~~lgl~~---~~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~~~l 390 (526)
.++|++. ++|+ |+.+... + ..+|+.- ...|++|.+|.++|||++ ||++||+|++|||+++.++.++
T Consensus 7 ~~~g~v~-r~~l~~~~~v~l~~~-~----~~lG~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~ 80 (117)
T 1uit_A 7 GGERRKD-RPYVEEPRHVKVQKG-S----EPLGISIVSGEKGGIYVSKVTVGSIAHQAGLEYGDQLLEFNGINLRSATEQ 80 (117)
T ss_dssp CCCCCSC-CCCSCCCEEEEEECS-S----CCCCEEEEECTTSCEEEEEECTTSHHHHHTCCTTCEECEETTEETTTCCHH
T ss_pred cccCccc-cccCCCCEEEEEEeC-C----CCccEEEEccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHH
Confidence 3578887 8999 8888765 2 2233321 246899999999999999 9999999999999999998775
Q ss_pred ccccccchhhhhhhhhcCCCCEEEEEEEECCEEEE
Q 009784 391 PFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILN 425 (526)
Q Consensus 391 ~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~~~ 425 (526)
. ..+.....|+++.|+|.|+++..+
T Consensus 81 ~----------~~~~~~~~g~~v~l~v~r~~~~~~ 105 (117)
T 1uit_A 81 Q----------ARLIIGQQCDTITILAQYNPHVHQ 105 (117)
T ss_dssp H----------HHHHTTSCCSEEEEEECCCSCCCC
T ss_pred H----------HHHHHHcCCCeEEEEEEECCchhh
Confidence 3 333344679999999999987654
No 135
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=99.01 E-value=1.1e-10 Score=96.26 Aligned_cols=61 Identities=15% Similarity=0.201 Sum_probs=51.1
Q ss_pred ccceEEEEeCCCCcccC-CCCCCcEEEEECCEEe--cCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCE
Q 009784 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDI--ANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I--~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~ 422 (526)
..|++|.+|.++|||++ ||++||+|++|||+++ .++.++. .++....+|+++.|+|.|+|+
T Consensus 27 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~----------~~l~~~~~g~~v~l~v~R~g~ 90 (90)
T 2eaq_A 27 IPGIFVASVEAGSPAEFSQLQVDDEIIAINNTKFSYNDSKEWE----------EAMAKAQETGHLVMDVRRYGK 90 (90)
T ss_dssp TTEEEEEEECTTSHHHHTTCCTTCEEEEETTEECCTTCHHHHH----------HHHHHHHHHTEEEEEEEEEC-
T ss_pred CCCEEEEEECCCChHHHcCCCCCCEEEEECCEEccCCCHHHHH----------HHHHhcCCCCEEEEEEEeCCC
Confidence 36899999999999999 9999999999999999 6666643 555554568999999999874
No 136
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.00 E-value=2.4e-09 Score=100.38 Aligned_cols=120 Identities=15% Similarity=0.160 Sum_probs=86.0
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECC--EEEEEE
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDS--KILNFN 427 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G--~~~~~~ 427 (526)
..|++|.+|.++|||++ | |++||+|++|||+++.++.++. ........|+.+.|+|.|++ ....++
T Consensus 34 ~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~----------~~~~~~~~g~~v~l~v~r~~~~~~~~~~ 103 (196)
T 3gsl_A 34 DPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSA----------AVEALKEAGSIVRLYVMRRKPPAEKVME 103 (196)
T ss_dssp CCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHH----------HHHHHHTSCSEEEEEEEEECCCCEEEEE
T ss_pred CCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHH----------HHHHHHhCCCcEEEEEEecCCCccccEE
Confidence 46899999999999999 9 9999999999999999987753 22333456999999999988 455556
Q ss_pred EEecccccccCCCCCCCCCceEEEeeEEEEecccc-----ceeeeeeeecc--hhhhcc-ccccceeeeecccchhh
Q 009784 428 ITLATHRRLIPSHNKGRPPSYYIIAGFVFSRCLYL-----ISVLSMERIMN--MKLRSS-FWTSSCIQCHNCQMSSL 496 (526)
Q Consensus 428 v~l~~~~~~~p~~~~~~~p~~~i~gG~~f~~lt~~-----~~~~~~~~i~~--~~~~sg-~~~~~~~~~~~~~~~~~ 496 (526)
+++...+. . -|+.+...... ...+.+..+.+ .+.++| |+.||.|...|.+-...
T Consensus 104 v~l~~~~~-----------~----lG~~~~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~ 165 (196)
T 3gsl_A 104 IKLIKGPK-----------G----LGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLED 165 (196)
T ss_dssp EEEEEBTT-----------B----SCEEEEESBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSS
T ss_pred EEEecCCC-----------C----ceEEEEccCCCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCCcCCC
Confidence 66544321 0 13343332211 12345666665 456789 99999999999976654
No 137
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=98.96 E-value=6.4e-10 Score=92.79 Aligned_cols=82 Identities=18% Similarity=0.322 Sum_probs=61.8
Q ss_pred ccccCceeeeccChhHHhhhcCCCCccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCCCCcccccccchhhhhhhh
Q 009784 327 FPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVS 405 (526)
Q Consensus 327 ~~~LGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~ 405 (526)
..+||+.+..-.... .......|++|.+|.++|||++ ||++||+|++|||+++.+..++. ....
T Consensus 13 ~~glG~~i~~g~~~~-----~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~----------~~~~ 77 (97)
T 2w4f_A 13 TGGLGISIAGGKGST-----PYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHE----------AVEA 77 (97)
T ss_dssp TTBSSEEEEECTTSC-----CSBTTBCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHH----------HHHH
T ss_pred CCceeEEEECCccCC-----cccCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCcCHHH----------HHHH
Confidence 467888876431100 0112357999999999999999 99999999999999999987753 2222
Q ss_pred hcCCCCEEEEEEEECCEE
Q 009784 406 QKYTGDSAAVKVLRDSKI 423 (526)
Q Consensus 406 ~~~~G~~v~l~v~R~G~~ 423 (526)
...+|+++.|+|.|+|+.
T Consensus 78 ~~~~g~~v~l~v~R~g~~ 95 (97)
T 2w4f_A 78 LRGAGTAVQMRVWRERET 95 (97)
T ss_dssp HHTSCSEEEEEEECCSSC
T ss_pred HhCCCCeEEEEEEeCCcc
Confidence 334799999999999875
No 138
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=98.96 E-value=4.3e-10 Score=92.87 Aligned_cols=60 Identities=22% Similarity=0.256 Sum_probs=52.2
Q ss_pred cceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCCC--CcccccccchhhhhhhhhcCCCCEEEEEEEECCEEE
Q 009784 353 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDG--TVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKIL 424 (526)
Q Consensus 353 ~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~~--~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~~ 424 (526)
.|++|.+|.++|||++ ||++||+|++|||+++.++. ++. .++.. +|+++.|+|.|+|+.+
T Consensus 27 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~----------~~l~~--~g~~v~l~v~R~g~~~ 89 (91)
T 2pkt_A 27 QPLAISRVTPGSKAALANLCIGDVITAIDGENTSNMTHLEAQ----------NRIKG--CTDNLTLTVARSEHES 89 (91)
T ss_dssp EEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHH----------HHHHT--CSSEEEEEEEEECCCC
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HHHHc--CCCeEEEEEEECCccc
Confidence 6899999999999998 99999999999999999988 432 44444 7999999999998764
No 139
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.96 E-value=3.8e-10 Score=94.33 Aligned_cols=70 Identities=14% Similarity=0.212 Sum_probs=59.3
Q ss_pred eEEEEeCCCCcccC-CCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECC--EEEEEEEEec
Q 009784 355 VRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDS--KILNFNITLA 431 (526)
Q Consensus 355 v~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G--~~~~~~v~l~ 431 (526)
.+|.+|.++|||++ ||++||+|++|||++|.++.++. ..+.....++++.++|.|+| +..++++++.
T Consensus 4 p~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~d~~----------~~l~~~~~~~~v~l~v~R~g~~~~~~~~l~l~ 73 (95)
T 3id1_A 4 PVVGEIAANSIAAEAQIAPGTELKAVDGIETPDWDAVR----------LQLVDKIGDESTTITVAPFGSDQRRDVKLDLR 73 (95)
T ss_dssp CBEEEECTTSHHHHTTCCTTCEEEEETTEECSSHHHHH----------HHHHHTTTCSEEEEEEECTTCCCCEEEEEECT
T ss_pred CEEEeeCCCCHHHHcCCCCCCEEEEECCEECCCHHHHH----------HHHHHhcCCCcEEEEEEECCCCceEEEEEEcc
Confidence 46889999999999 99999999999999999998864 56666555689999999987 5677888887
Q ss_pred ccc
Q 009784 432 THR 434 (526)
Q Consensus 432 ~~~ 434 (526)
..+
T Consensus 74 ~~~ 76 (95)
T 3id1_A 74 HWA 76 (95)
T ss_dssp TCC
T ss_pred ccc
Confidence 753
No 140
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=98.94 E-value=2.6e-10 Score=94.18 Aligned_cols=78 Identities=10% Similarity=0.218 Sum_probs=53.6
Q ss_pred ChhHHhhhcCCCCccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEec--CCCCcccccccchhhhhhhhhcCCCCEEE
Q 009784 339 NPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYLVSQKYTGDSAA 414 (526)
Q Consensus 339 ~~~~~~~lgl~~~~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~--~~~~l~~~~~~~~~~~~~l~~~~~G~~v~ 414 (526)
+++.++.+|+... .|++|.+|.++|||++ | |++||+|++|||+++. ++.++. .++.. .++++.
T Consensus 10 ~~~~~~~~g~~~~-~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~----------~~l~~--~~~~v~ 76 (92)
T 3cyy_A 10 KSAKNEEYGLRLA-SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAK----------TLIER--SKGKLK 76 (92)
T ss_dssp CSSTTSCCCEEEE-EEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHH----------HHHHT--TTTEEE
T ss_pred eCCCCCCCCEEEe-CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHH----------HHHHc--CCCcEE
Confidence 4455566776532 7899999999999998 9 9999999999999998 655542 44443 356999
Q ss_pred EEEEECCEEEEEEEE
Q 009784 415 VKVLRDSKILNFNIT 429 (526)
Q Consensus 415 l~v~R~G~~~~~~v~ 429 (526)
|+|.|+|+..+++++
T Consensus 77 l~v~r~g~~~~~~v~ 91 (92)
T 3cyy_A 77 MVVQRDERATLLNVP 91 (92)
T ss_dssp EEEEC----------
T ss_pred EEEEeCCceeeeeCC
Confidence 999999988776654
No 141
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.93 E-value=1.1e-09 Score=92.23 Aligned_cols=75 Identities=15% Similarity=0.119 Sum_probs=59.7
Q ss_pred ccccCceeeeccChhHHhhhcCCCCccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCCCCcccccccchhhhhhhh
Q 009784 327 FPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVS 405 (526)
Q Consensus 327 ~~~LGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~ 405 (526)
.++||+.+.... +...|++|.+|.++|||++ ||++||+|++|||+++.+.. +. +++.
T Consensus 21 ~~~lG~~~~~~~-----------~~~~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~-~~----------~~~~ 78 (100)
T 2eeh_A 21 AGRLGFSVRGGS-----------EHGLGIFVSKVEEGSSAERAGLCVGDKITEVNGLSLESTT-MG----------SAVK 78 (100)
T ss_dssp SSSCSEEEECCT-----------TTTCCEEEEEECTTSHHHHHTCCSSCEEEEETTEECSSCC-HH----------HHHH
T ss_pred CCCccEEEEccc-----------cCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCC-HH----------HHHH
Confidence 567999888652 1236899999999999999 99999999999999999875 32 3333
Q ss_pred hcCCCCEEEEEEEECCEE
Q 009784 406 QKYTGDSAAVKVLRDSKI 423 (526)
Q Consensus 406 ~~~~G~~v~l~v~R~G~~ 423 (526)
..+.|+++.|+|+|+|+.
T Consensus 79 ~~~~~~~v~l~v~R~g~~ 96 (100)
T 2eeh_A 79 VLTSSSRLHMMVRRMGSG 96 (100)
T ss_dssp HHHSCSSEEEEEEECSCC
T ss_pred hhcCCCEEEEEEEECCcC
Confidence 333489999999999864
No 142
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.93 E-value=1.9e-09 Score=101.84 Aligned_cols=126 Identities=12% Similarity=0.091 Sum_probs=88.0
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecC--CCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEEE---
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKIL--- 424 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~--~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~~--- 424 (526)
..|++|.+|.++|||++ | |++||+|++|||+++.+ +.++. .++....+|++++|+|.|+|+..
T Consensus 35 ~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~----------~~l~~~~~g~~v~l~v~R~~~~~~~~ 104 (196)
T 1p1d_A 35 SSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEAN----------QLLRDSSITSKVTLEIEFDVAESVIP 104 (196)
T ss_dssp SCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHH----------HHHHTCCSSSEEEEEEEECSCSCCBC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHH----------HHHHhCCCCCeEEEEEEecCCCCCCC
Confidence 45799999999999999 9 99999999999999984 45543 56666656999999999999632
Q ss_pred ---EEEEEecccccccCCCCCCCCCceEEEeeEEEEecccc--ceeeeeeeecc--hhhhcc-ccccceeeeecccchhh
Q 009784 425 ---NFNITLATHRRLIPSHNKGRPPSYYIIAGFVFSRCLYL--ISVLSMERIMN--MKLRSS-FWTSSCIQCHNCQMSSL 496 (526)
Q Consensus 425 ---~~~v~l~~~~~~~p~~~~~~~p~~~i~gG~~f~~lt~~--~~~~~~~~i~~--~~~~sg-~~~~~~~~~~~~~~~~~ 496 (526)
..++++... .. . .-|+.+...+.. ...+.+..+.+ .+.++| |..||.|...|.+-...
T Consensus 105 ~~~~~~v~l~~~----------~~-~---~lG~~~~~~~~~~~~~gv~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~ 170 (196)
T 1p1d_A 105 SSGTFHVKLPKK----------HS-V---ELGITISSPSSRKPGDPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDS 170 (196)
T ss_dssp CSSCEEEEECCC----------SS-C---CCCCEEECSCSSSTTCCCEEEECCSSSHHHHTSCCCTTCEEEEETTEEGGG
T ss_pred CCCcEEEEecCC----------CC-C---CcCEEEECCCCCCCCCCEEEEEECCCCcHHhcCCCCCCCEEEEECCEECCC
Confidence 122333211 00 0 126666665322 23445555555 456799 99999999999977666
Q ss_pred --hHHHH
Q 009784 497 --LWCLR 501 (526)
Q Consensus 497 --~~~~~ 501 (526)
...+.
T Consensus 171 ~~~~~~~ 177 (196)
T 1p1d_A 171 CSMEDAV 177 (196)
T ss_dssp CCHHHHH
T ss_pred CCHHHHH
Confidence 44443
No 143
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.92 E-value=1.3e-09 Score=93.32 Aligned_cols=83 Identities=19% Similarity=0.300 Sum_probs=61.0
Q ss_pred ccccCceeeeccChhHHhhhcCCCCccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCCCCcccccccchhhhhhhh
Q 009784 327 FPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVS 405 (526)
Q Consensus 327 ~~~LGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~ 405 (526)
+..||+.+..-.+. ..+.....|++|.+|.++|||++ ||++||+|++|||++|.+..++. ....
T Consensus 25 ~~glG~~i~~g~~~-----~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~----------~~~~ 89 (110)
T 1x5q_A 25 TGGLGISIAGGKGS-----TPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHE----------AVEA 89 (110)
T ss_dssp SSSCSEEEEECTTS-----CCSSTTCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHH----------HHHH
T ss_pred CCeeeEEEEccccC-----CccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHH----------HHHH
Confidence 44677777643110 01112457999999999999999 99999999999999999876643 2222
Q ss_pred hcCCCCEEEEEEEECCEEE
Q 009784 406 QKYTGDSAAVKVLRDSKIL 424 (526)
Q Consensus 406 ~~~~G~~v~l~v~R~G~~~ 424 (526)
...+|+++.|+|+|+|+.+
T Consensus 90 ~~~~g~~v~l~v~R~g~~~ 108 (110)
T 1x5q_A 90 LRGAGTAVQMRVWRESGPS 108 (110)
T ss_dssp HHSCCSEEEEEEEECSSCC
T ss_pred hhCCCCeEEEEEEECCccC
Confidence 2347999999999998754
No 144
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.92 E-value=4.2e-10 Score=92.83 Aligned_cols=67 Identities=24% Similarity=0.328 Sum_probs=57.8
Q ss_pred eEEEEeCCCCcccC-CCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEEEEEEEEecc
Q 009784 355 VRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLAT 432 (526)
Q Consensus 355 v~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~~~~~v~l~~ 432 (526)
++|.+|.++|||++ ||++||+|++|||+++.++.++. ..+.. .+|+++.++|.|+|+.+++++++..
T Consensus 6 ~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~----------~~l~~-~~g~~v~l~v~R~g~~~~~~v~~~~ 73 (91)
T 2zpm_A 6 PVLENVQPNSAASXAGLQAGDRIVXVDGQPLTQWVTFV----------MLVRD-NPGXSLALEIERQGSPLSLTLIPES 73 (91)
T ss_dssp CBCSEECTTSHHHHTTCCTTCEEEEETTEECCCHHHHH----------HHHHH-CTTCCEEEEEEETTEEEEEEECCEE
T ss_pred eEEEEECCCChHHhcCCCCCCEEEEECCeEcCCHHHHH----------HHHhc-CCCCeEEEEEEECCeEEEEEEEEee
Confidence 56889999999998 99999999999999999988764 55555 4789999999999999888887644
No 145
>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A
Probab=98.91 E-value=2.1e-09 Score=119.22 Aligned_cols=168 Identities=18% Similarity=0.184 Sum_probs=98.4
Q ss_pred EEEeeeeCCCCCCccccCCC-----cceEEEEEEEeCCEEEecccccCCC---CeEEEEEcC--------CCcEEEEEEE
Q 009784 127 KVFCVHTEPNFSLPWQRKRQ-----YSSSSSGFAIGGRRVLTNAHSVEHY---TQVKLKKRG--------SDTKYLATVL 190 (526)
Q Consensus 127 ~I~~~~~~~~~~~P~~~~~~-----~~~~GSGfvI~~g~ILT~aHvV~~~---~~i~V~~~~--------~g~~~~a~vv 190 (526)
+|.++......++||+.... ....|+|.+|++.||||+|||+.+. ..+.|.+.. ++..+..+-+
T Consensus 387 rIvgG~~a~~~~~Pw~v~L~~~~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~V~~i 466 (625)
T 2f83_A 387 RIVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYSGILNQSEIKEDTSFFGVQEI 466 (625)
T ss_dssp CCCSSSSCCTTSSTTEEEEEECSSSSEEEEEEEECSSSEEEECGGGGSSCCCGGGEEEEESCSBGGGCCSSCCCEEEEEE
T ss_pred ceECCEECCCCCCCeEEEEEEecCCCcEEEEEEEECCCEEEEcHHhCCCCCCCceEEEEEEeccCCCCCCCceEEeEEEE
Confidence 45556666667788876432 3467999999999999999999753 346776631 1233455545
Q ss_pred Eecc-------CCCeEEEEecccc-cccCceeeecCCCC---cCCCcEEEEeeCCCCCc-------eeEEEEEEeceeee
Q 009784 191 AIGT-------ECDIAMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGDT-------ISVTSGVVSRIEIL 252 (526)
Q Consensus 191 ~~d~-------~~DlAlLkv~~~~-~~~~~~pl~l~~~~---~~g~~V~~iG~p~~~~~-------~sv~~GiVs~~~~~ 252 (526)
..++ .+||||||++.+. +.+.+.|+.|.... ..+..+++.||...... ..+..-+++...+.
T Consensus 467 i~Hp~y~~~~~~nDIALlkL~~pv~~~~~v~PicLp~~~~~~~~~~~~~v~GWG~~~~~~~~s~~L~~~~v~i~~~~~C~ 546 (625)
T 2f83_A 467 IIHDQYKMAESGYDIALLKLETTVNYTDSQRPICLPSKGDRNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEECQ 546 (625)
T ss_dssp EECTTCCBTTTBCCCEEEEESSCCCCBTTBCCCBCCCGGGTTCCCCCEEECBCC------CCCSBCBCCEECCCCHHHHH
T ss_pred EECCccCcCCccccEEEEEECCcccCCCceeeeEcCCccCCccCCCEEEEEEecCCCCCCcCCcccEEEEEEEcCHHHHH
Confidence 5554 3699999998763 44567888887532 35788899998643211 11122222222221
Q ss_pred eccCC-ceeeeEEEE-----cccCCCCCCCCeeecC-CC--eEEEEEeecc
Q 009784 253 SYVHG-STELLGLQI-----DAAINSGNSGGPAFND-KG--KCVGIAFQSL 294 (526)
Q Consensus 253 ~~~~~-~~~~~~i~~-----da~i~~G~SGGPlvn~-~G--~VVGI~~~~~ 294 (526)
....+ .....+|+. ....+.|+|||||+.. +| .++||++.+.
T Consensus 547 ~~~~~~~i~~~~iCag~~~~~~d~C~GDSGGPLv~~~~~~~~lvGIvS~G~ 597 (625)
T 2f83_A 547 KRYRGHKITHKMICAGYREGGKDACKGDSGGPLSCKHNEVWHLVGITSWGE 597 (625)
T ss_dssp TTCTTSCCCTTBCCC----------CCCTTCEEEEEETTEEEEEEEEEECC
T ss_pred HHhccCCCCCCeEEeecCCCCCcCCCCCcccceEEEECCeEEEEEEEEeCC
Confidence 11111 011112322 2357899999999854 45 5999998764
No 146
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=98.91 E-value=2e-09 Score=90.96 Aligned_cols=83 Identities=19% Similarity=0.224 Sum_probs=61.3
Q ss_pred ccccCceeeeccChhHH-hhhcCCCCccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCCC--Ccccccccchhhhh
Q 009784 327 FPLLGVEWQKMENPDLR-VAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDG--TVPFRHGERIGFSY 402 (526)
Q Consensus 327 ~~~LGi~~~~~~~~~~~-~~lgl~~~~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~~--~l~~~~~~~~~~~~ 402 (526)
+++||+.+..-.+.+.+ ..++......|++|.+|.++|||++ ||++||+|++|||+++.+.. ++. .
T Consensus 18 ~~~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~----------~ 87 (104)
T 3sfj_A 18 NLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQAR----------K 87 (104)
T ss_dssp EEECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHH----------H
T ss_pred CCcccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHH----------H
Confidence 55799998833222222 1233333568999999999999999 99999999999999998765 432 3
Q ss_pred hhhhcCCCCEEEEEEEEC
Q 009784 403 LVSQKYTGDSAAVKVLRD 420 (526)
Q Consensus 403 ~l~~~~~G~~v~l~v~R~ 420 (526)
.+.. ..|+++.|+|.|+
T Consensus 88 ~l~~-~~g~~v~l~v~R~ 104 (104)
T 3sfj_A 88 RLTK-RSEEVVRLLVTRQ 104 (104)
T ss_dssp HHTC-TTCSEEEEEEEEC
T ss_pred HHHh-CCCCEEEEEEEcC
Confidence 4433 5789999999985
No 147
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=98.90 E-value=1.1e-09 Score=93.87 Aligned_cols=84 Identities=14% Similarity=0.156 Sum_probs=66.2
Q ss_pred cccCceeeeccChhHHhhhcCCCCccceEEEEeCCCCcccC-CC-CCCcEEEEECCEEecC--CCCcccccccchhhhhh
Q 009784 328 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VL-KPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYL 403 (526)
Q Consensus 328 ~~LGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~~~spA~~-GL-~~GDvIl~vnG~~I~~--~~~l~~~~~~~~~~~~~ 403 (526)
..+|+.+... ....|++|.+|.++|||++ || ++||+|++|||+++.+ +.++. .+
T Consensus 13 ~glG~~~~~~------------~~~~~~~V~~v~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~----------~~ 70 (112)
T 1qau_A 13 GGLGFLVKER------------VSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSAL----------EV 70 (112)
T ss_dssp TBTSEEEEEC------------SSSSCEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTSCHHHHH----------HH
T ss_pred CceeEEEEec------------CCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHH----------HH
Confidence 3477776644 1246899999999999999 98 9999999999999988 45542 45
Q ss_pred hhhcCCCCEEEEEEEECCEEEEEEEEecccc
Q 009784 404 VSQKYTGDSAAVKVLRDSKILNFNITLATHR 434 (526)
Q Consensus 404 l~~~~~G~~v~l~v~R~G~~~~~~v~l~~~~ 434 (526)
+.. ..|+++.|+|.|+|+..++++++...+
T Consensus 71 l~~-~~g~~v~l~v~R~g~~~~~~~~~~~~~ 100 (112)
T 1qau_A 71 LRG-IASETHVVLILRGPEGFTTHLETTFTG 100 (112)
T ss_dssp HHH-SCSSSEEEEEEECCTTSEEEEEEEECT
T ss_pred HHh-CCCCcEEEEEEeCCcccceEeeeeccC
Confidence 544 578999999999999888887765543
No 148
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=98.88 E-value=4.7e-09 Score=99.59 Aligned_cols=120 Identities=20% Similarity=0.149 Sum_probs=81.2
Q ss_pred cceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecC--CCCcccccccchhhhhhhhhcCCCCE-EEEEEEECCEEEE--
Q 009784 353 KGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYLVSQKYTGDS-AAVKVLRDSKILN-- 425 (526)
Q Consensus 353 ~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~--~~~l~~~~~~~~~~~~~l~~~~~G~~-v~l~v~R~G~~~~-- 425 (526)
.|++|.+|.++|||++ | ||+||+|++|||+++.+ ..... +...+ ...++. +.|+|+|+++...
T Consensus 45 ~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~--------~~~~~--~~~~~~~v~l~v~R~~~~~~~~ 114 (206)
T 3r0h_A 45 TGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLK--------VHQLF--HTTYEKAVTLTVFRADPPELEK 114 (206)
T ss_dssp SCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCHHH--------HHHHH--HSCCSSEEEEEEECCSSCCEEE
T ss_pred CCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccCHHH--------HHHHH--HhcCCCceEEEEEecccCCCcE
Confidence 5899999999999998 8 99999999999999998 44321 11222 234555 9999999986543
Q ss_pred EEEEecccccccCCCCCCCCCceEEEeeEEEEeccccceeeeeeeecc--hhhhcc-ccccceeeeecccchhhhHH
Q 009784 426 FNITLATHRRLIPSHNKGRPPSYYIIAGFVFSRCLYLISVLSMERIMN--MKLRSS-FWTSSCIQCHNCQMSSLLWC 499 (526)
Q Consensus 426 ~~v~l~~~~~~~p~~~~~~~p~~~i~gG~~f~~lt~~~~~~~~~~i~~--~~~~sg-~~~~~~~~~~~~~~~~~~~~ 499 (526)
+++++..... . ..|+.+... ...+.+..+.+ .+.++| |+.||.|...|.+-....++
T Consensus 115 ~~v~l~~~~~--------~------~lG~~~~~~---~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~ 174 (206)
T 3r0h_A 115 FNVDLMKKAG--------K------ELGLSLSPN---EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPF 174 (206)
T ss_dssp EEEEEECCTT--------C------CCCEEEEEC---SSCEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCH
T ss_pred EEEEEecCCC--------C------ccCeEEEcC---CceEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 4444332110 0 114444422 12345556655 345789 99999999999977766543
No 149
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.87 E-value=1.9e-08 Score=95.10 Aligned_cols=125 Identities=14% Similarity=0.068 Sum_probs=84.4
Q ss_pred ccceEEEEeCCCCcccC--CCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEE------
Q 009784 352 QKGVRIRRVDPTAPESE--VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI------ 423 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~--GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~------ 423 (526)
..|++|.+|.++|||++ ||++||+|++|||+++.++.... +..++ ...|+++.|+|.|+++.
T Consensus 32 ~~~~~V~~v~~~spA~~aggl~~GD~I~~vng~~v~~~~~~~--------~~~~~--~~~g~~v~l~v~R~~~~~~~~g~ 101 (200)
T 2qt5_A 32 DGKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHDE--------IISLL--KNVGERVVLEVEYELPPVSIQGS 101 (200)
T ss_dssp SSCSEEEEECTTSHHHHTTSCCTTCEEEEETTEECTTSCHHH--------HHHHH--HTCCSEEEEEEEEECCCCCCCCS
T ss_pred CCCeEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHH--------HHHHH--HhCCCeEEEEEeccCCCcccCCC
Confidence 46799999999999985 89999999999999999884321 11333 24689999999998742
Q ss_pred ----EEEEEEecccccccCCCCCCCCCceEEEeeEEEEeccc----cceeeeeeeecc--hhhhcc-ccccceeeeeccc
Q 009784 424 ----LNFNITLATHRRLIPSHNKGRPPSYYIIAGFVFSRCLY----LISVLSMERIMN--MKLRSS-FWTSSCIQCHNCQ 492 (526)
Q Consensus 424 ----~~~~v~l~~~~~~~p~~~~~~~p~~~i~gG~~f~~lt~----~~~~~~~~~i~~--~~~~sg-~~~~~~~~~~~~~ 492 (526)
.++++++.... .. .|+.+..... ....+.+..+.+ .+.++| |+.||.|...|.+
T Consensus 102 ~~~~~~~~v~l~~~~---------~~------lG~~l~~g~~~~~~~~~g~~V~~v~~~s~A~~aG~l~~GD~I~~ing~ 166 (200)
T 2qt5_A 102 SVMFRTVEVTLHKEG---------NT------FGFVIRGGAHDDRNKSRPVVITCVRPGGPADREGTIKPGDRLLSVDGI 166 (200)
T ss_dssp SEEEEEEEEEEECBT---------TB------CSEEEEEECCSSTTTCEEEEEEEECTTSHHHHHCCCCTTCEEEEETTE
T ss_pred ccceeEEEEEEecCC---------CC------eEEEEECCCCCCccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCE
Confidence 55666654211 11 1444333221 123455566655 456789 9999999999997
Q ss_pred chh--hhHHHH
Q 009784 493 MSS--LLWCLR 501 (526)
Q Consensus 493 ~~~--~~~~~~ 501 (526)
-.. +..++.
T Consensus 167 ~v~~~~~~~~~ 177 (200)
T 2qt5_A 167 RLLGTTHAEAM 177 (200)
T ss_dssp ECTTCCHHHHH
T ss_pred ECCCCCHHHHH
Confidence 666 444443
No 150
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=98.87 E-value=1.1e-09 Score=92.39 Aligned_cols=82 Identities=20% Similarity=0.216 Sum_probs=56.2
Q ss_pred ccccCceeeeccChhHHhhhcCCCCccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecC--CCCcccccccchhhhh
Q 009784 327 FPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSY 402 (526)
Q Consensus 327 ~~~LGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~--~~~l~~~~~~~~~~~~ 402 (526)
++++|+.+... +....+.++++ ...|++|.+|.++|||++ | |++||+|++|||+++.+ ..++. .
T Consensus 15 ~~~lG~~~~~~-~~~~~~~~~~~-~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~----------~ 82 (103)
T 2fcf_A 15 SKSLGISIVGG-RGMGSRLSNGE-VMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAV----------E 82 (103)
T ss_dssp -CCCCEEEECC-CC--------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHH----------H
T ss_pred CCceeEEEEcc-CCCCcccccCC-CCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHH----------H
Confidence 57899999876 44444444443 357999999999999999 9 99999999999999988 44442 4
Q ss_pred hhhhcCCCCEEEEEEEECCE
Q 009784 403 LVSQKYTGDSAAVKVLRDSK 422 (526)
Q Consensus 403 ~l~~~~~G~~v~l~v~R~G~ 422 (526)
++... ++++.|+|.|.++
T Consensus 83 ~l~~~--~~~v~l~v~r~~~ 100 (103)
T 2fcf_A 83 AIRKA--GNPVVFMVQSIIS 100 (103)
T ss_dssp HHHTC--CSSEEEEEECCCC
T ss_pred HHHhC--CCcEEEEEEECCC
Confidence 45443 5589999999765
No 151
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=98.86 E-value=4.2e-09 Score=87.39 Aligned_cols=59 Identities=22% Similarity=0.311 Sum_probs=50.4
Q ss_pred cceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCE
Q 009784 353 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (526)
Q Consensus 353 ~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~ 422 (526)
.|++|..|.++|||++ ||++||+|++|||+++.+..+. +++...+.|++++|+|+|++.
T Consensus 29 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~-----------~~~~~~~~g~~v~l~v~R~~~ 88 (93)
T 2dls_A 29 RIVLVQSVRPGGAAMKAGVKEGDRIIKVNGTMVTNSSHL-----------EVVKLIKSGAYVALTLLGSSS 88 (93)
T ss_dssp SSCEEEEECSSSTTTTTTCCSSCEEEEETTEECSSSCHH-----------HHHHHHTSSSEEEEEEECCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHH-----------HHHHhhcCCCEEEEEEEECCC
Confidence 5899999999999999 9999999999999999987653 334444579999999999864
No 152
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=98.85 E-value=7.4e-10 Score=91.49 Aligned_cols=61 Identities=18% Similarity=0.261 Sum_probs=46.4
Q ss_pred ccceEEEEeCCCCcccC-CCCCCcEEEEECCEEec--CCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEEE
Q 009784 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKIL 424 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~--~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~~ 424 (526)
..|++|.+|.++|||++ ||++||+|++|||+++. +..++. .++... |+++.|+|.|+++..
T Consensus 26 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~----------~~l~~~--g~~v~l~v~r~~~~~ 89 (91)
T 2vsp_A 26 LPGSFIKEVQKGGPADLAGLEDEDVIIEVNGVNVLDEPYEKVV----------DRIQSS--GKNVTLLVCGKKAQD 89 (91)
T ss_dssp CSCCBC-CCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHH----------HHHTTS--CSEEEEEEEC-----
T ss_pred CCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HHHHcC--CCEEEEEEEeCCccc
Confidence 36899999999999999 99999999999999998 555542 444443 999999999988764
No 153
>1arb_A Achromobacter protease I; hydrolase(serine protease); 1.20A {Achromobacter lyticus} SCOP: b.47.1.1 PDB: 1arc_A*
Probab=98.85 E-value=4.3e-08 Score=97.35 Aligned_cols=142 Identities=12% Similarity=0.139 Sum_probs=73.2
Q ss_pred eEEEEEEEeC------CEEEecccccCCC----CeEEEEEcC---C---------C--------cE-EEEEEEEeccCCC
Q 009784 149 SSSSGFAIGG------RRVLTNAHSVEHY----TQVKLKKRG---S---------D--------TK-YLATVLAIGTECD 197 (526)
Q Consensus 149 ~~GSGfvI~~------g~ILT~aHvV~~~----~~i~V~~~~---~---------g--------~~-~~a~vv~~d~~~D 197 (526)
..|+|++|++ .||||+|||+.+. ..+.|.+.. + + .. ....+++....+|
T Consensus 34 ~~CGGSLI~~~~~~~~~~VLTAAHCv~~~~~~~~~~~v~~~~~~~~c~~~~~~~~~~~~~~~~~~~~v~~~i~h~~~~nD 113 (268)
T 1arb_A 34 LACTGSLVNNTANDRKMYFLTAHHCGMGTASTAASIVVYWNYQNSTCRAPNTPASGANGDGSMSQTQSGSTVKATYATSD 113 (268)
T ss_dssp EEEEEEEBCCTTCCCCCEEEEEGGGSCCSHHHHHTCEEEESCCCSSCCCTTSGGGGSCCCCCCCCEEECEEEEEEETTTT
T ss_pred cEEeEEEEcCCCCCCCCEEEEcHHhCCCccCcceEEEEEeCCCCCccccccccccccccCCcceEEeccceEecCCCCCc
Confidence 6899999996 6999999999752 245565521 0 0 11 2234445566799
Q ss_pred eEEEEecccccccCceee--ecCCCCcCCCcEEEEeeCCCCCceeEEEEEEeceeeeeccCCceeeeEEEEc-----ccC
Q 009784 198 IAMLTVEDDEFWEGVLPV--EFGELPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQID-----AAI 270 (526)
Q Consensus 198 lAlLkv~~~~~~~~~~pl--~l~~~~~~g~~V~~iG~p~~~~~~sv~~GiVs~~~~~~~~~~~~~~~~i~~d-----a~i 270 (526)
|||||++.+.. ...... -.+....-+.....+..|.+... .++...+.... ..+. ......+|+.. ...
T Consensus 114 IALLrL~~~v~-~~~~~~vsGWG~t~~~~~~~~~~~~~~~~l~-~i~~~~~~~~~-~~~~-~~~~~~~iCag~~~~~gdt 189 (268)
T 1arb_A 114 FTLLELNNAAN-PAFNLFWAGWDRRDQNYPGAIAIHHPNVAEK-RISNSTSPTSF-VAWG-GGAGTTHLNVQWQPSGGVT 189 (268)
T ss_dssp EEEEEESSCCC-GGGCCEEBCEECCSCCCSCEEEEECGGGCSC-EEEEECSCCEE-ECTT-SSSCSSEEEEECCTTSCCC
T ss_pred eEEEEecCCCC-CCCceEEeCcCccCCCCCcceeeccCCcccE-EEEeecccccc-cccc-ccccCCeEEEeeecCCCCC
Confidence 99999997520 000000 00110011111222222222111 12222211100 0111 11111244442 147
Q ss_pred CCCCCCCeeecCCCeEEEEEeecc
Q 009784 271 NSGNSGGPAFNDKGKCVGIAFQSL 294 (526)
Q Consensus 271 ~~G~SGGPlvn~~G~VVGI~~~~~ 294 (526)
+.|+|||||++.+++++||++.+.
T Consensus 190 C~gdsGgPl~~~~~~~~Gi~s~g~ 213 (268)
T 1arb_A 190 EPGSSGSPIYSPEKRVLGQLHGGP 213 (268)
T ss_dssp CTTCTTCEEECTTSCEEEEEEECS
T ss_pred ccCcccCCcEeeCCEEEEEEeecC
Confidence 899999999987889999998764
No 154
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=98.85 E-value=1e-09 Score=88.14 Aligned_cols=77 Identities=10% Similarity=0.208 Sum_probs=57.7
Q ss_pred CceeeeccChhHHhhhcCCCCccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEec--CCCCcccccccchhhhhhhhh
Q 009784 331 GVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYLVSQ 406 (526)
Q Consensus 331 Gi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~--~~~~l~~~~~~~~~~~~~l~~ 406 (526)
|+++..+ +++..+.+|+... .|++|.+|.++|||++ | |++||+|++|||+++. ++.++. .++..
T Consensus 1 G~~~~~~-~~~~~~~~g~~~~-~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~----------~~l~~ 68 (81)
T 2rcz_A 1 GSKVTLV-KSRKNEEYGLRLA-SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAK----------TLIER 68 (81)
T ss_dssp CEEEEEE-CCSTTCCCCEEEE-EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHH----------HHHHT
T ss_pred CeEEEEE-ECCCCCCCCEEEe-CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHH----------HHHHC
Confidence 4555555 5666667777532 7899999999999998 9 9999999999999999 555542 44443
Q ss_pred cCCCCEEEEEEEECC
Q 009784 407 KYTGDSAAVKVLRDS 421 (526)
Q Consensus 407 ~~~G~~v~l~v~R~G 421 (526)
.++++.++|.|+|
T Consensus 69 --~~~~v~l~v~R~g 81 (81)
T 2rcz_A 69 --SKGKLKMVVQRDE 81 (81)
T ss_dssp --STTEEEEEEEC--
T ss_pred --CCCeEEEEEEeCC
Confidence 3459999999975
No 155
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=98.84 E-value=4.9e-09 Score=85.87 Aligned_cols=60 Identities=20% Similarity=0.369 Sum_probs=47.5
Q ss_pred ccceEEEEeCCCCcccCCCCCCcEEEEECCEEecCC--CCcccccccchhhhhhhhhcCCCCEEEEEEEECCE
Q 009784 352 QKGVRIRRVDPTAPESEVLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~GL~~GDvIl~vnG~~I~~~--~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~ 422 (526)
..|++|..+ ++|||+.||++||+|++|||+++.++ .++. ..+....+|+++.|+|.|+|+
T Consensus 26 ~~~~~v~~v-~~spA~aGl~~GD~I~~vng~~v~~~~~~~~~----------~~l~~~~~g~~v~l~v~R~g~ 87 (88)
T 3bpu_A 26 GGGQRVKQI-VDSPRSRGLKEGDLIVEVNKKNVQALTHNQVV----------DMLVESPKGSEVTLLVQRQTR 87 (88)
T ss_dssp SSSEEEEEC-CC--CCTTCCTTCEEEEETTEECTTSCHHHHH----------HHHHTSCTTCEEEEEEEEECC
T ss_pred CCcEEEEEe-cCChhHhCCCCCCEEEEECCEEcCCCCHHHHH----------HHHHhCCCCCEEEEEEEeCCc
Confidence 368888887 99999889999999999999999987 3432 445545679999999999875
No 156
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.83 E-value=4.8e-10 Score=98.32 Aligned_cols=80 Identities=20% Similarity=0.319 Sum_probs=64.2
Q ss_pred cccCceeeeccChhHHhhhcCCCCccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCCCcccccccchhhhhhhh
Q 009784 328 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVS 405 (526)
Q Consensus 328 ~~LGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~ 405 (526)
..||+.+.... .. ....|++|.+|.+++||++ | |++||+|++|||++|.++.++. .++.
T Consensus 32 ~~lG~~~~~~~-~~--------~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~----------~~l~ 92 (124)
T 1wh1_A 32 DKLGLTVCYRT-DD--------EDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQNREEAV----------ALLT 92 (124)
T ss_dssp CCCCEEEECCC-CC--------SSCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCCSHHHHH----------HHHT
T ss_pred CcccEEEEecC-CC--------CCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCHHHHH----------HHHH
Confidence 46899888762 11 1247999999999999999 9 9999999999999999877653 5555
Q ss_pred hcCCCCEEEEEEEECCEEEEEE
Q 009784 406 QKYTGDSAAVKVLRDSKILNFN 427 (526)
Q Consensus 406 ~~~~G~~v~l~v~R~G~~~~~~ 427 (526)
. .+|+++.|+|.|+|+.++..
T Consensus 93 ~-~~g~~v~l~v~R~g~~~~~~ 113 (124)
T 1wh1_A 93 S-EENKNFSLLIARPELQLDEG 113 (124)
T ss_dssp C-SSCCSCCEEEEECSSCCCCC
T ss_pred h-CCCCEEEEEEEECCEEeecc
Confidence 4 57899999999999875544
No 157
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}
Probab=98.82 E-value=1.4e-08 Score=111.28 Aligned_cols=190 Identities=18% Similarity=0.152 Sum_probs=90.4
Q ss_pred EEEeeeeCCCCCCccccCCC--cceEEEEEEEeCCEEEecccccCCC--CeEEEEEcC---------CCcEEEEEEEEec
Q 009784 127 KVFCVHTEPNFSLPWQRKRQ--YSSSSSGFAIGGRRVLTNAHSVEHY--TQVKLKKRG---------SDTKYLATVLAIG 193 (526)
Q Consensus 127 ~I~~~~~~~~~~~P~~~~~~--~~~~GSGfvI~~g~ILT~aHvV~~~--~~i~V~~~~---------~g~~~~a~vv~~d 193 (526)
+|..........+||+.... ....|+|.+|++.||||+|||+.+. ..+.|.+.. ....+..+-+..+
T Consensus 321 rIvgG~~a~~g~~Pw~v~l~~~~~~~CGGsLIs~~~VLTAAHCv~~~~~~~~~V~~G~~~~~~~~~~~~~~~~V~~ii~H 400 (565)
T 2xrc_A 321 RIVGGKRAQLGDLPWQVAIKDASGITCGGIYIGGCWILTAAHCLRASKTHRYQIWTTVVDWIHPDLKRIVIEYVDRIIFH 400 (565)
T ss_dssp -----------CCTTBCEEEESSSCCCCCEEEETTEEEECHHHHTTCSSCCEEEEC-------------CEEEEEEEEEC
T ss_pred ceECCEECCCCCCCcEEEEecCCceeeeEEEEeCCEEEEChhhcccCCCcceEEEEEEeeccCCCCCccEEEEEEEEEeC
Confidence 67777777888899987543 2357999999999999999999753 345555421 1223344445555
Q ss_pred c-------CCCeEEEEeccccc-----ccCceeeecCCCC---cCCCcEEEEeeCCCCCc------eeEEEEEEeceeee
Q 009784 194 T-------ECDIAMLTVEDDEF-----WEGVLPVEFGELP---ALQDAVTVVGYPIGGDT------ISVTSGVVSRIEIL 252 (526)
Q Consensus 194 ~-------~~DlAlLkv~~~~~-----~~~~~pl~l~~~~---~~g~~V~~iG~p~~~~~------~sv~~GiVs~~~~~ 252 (526)
+ .+||||||++.+.. ...+.|+.|.... ..++.+++.||...... ..+..-+++. +.
T Consensus 401 p~Y~~~~~~nDIALlkL~~~v~~~~~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~~~~~~L~~~~v~i~~~--C~ 478 (565)
T 2xrc_A 401 ENYNAGTYQNDIALIEMKKDGNKKDCELPRSIPACVPWSPYLFQPNDTCIVSGWGREKDNERVFSLQWGEVKLISN--CS 478 (565)
T ss_dssp TTCCTTTCTTCCEEEEECCCSSSSCSCCTTCCCCBCCSCTTSSCTTCEEEEEC-------------CEEEEEECSC--TH
T ss_pred CCCCCCcccccceeeeeccccccccccccceeeeecCCcccccCCCCEEEEEeCccCCCCCccceeeEEeeeehHH--hH
Confidence 4 36999999987631 1235677775432 35788999998653221 0112222221 11
Q ss_pred e-ccCCceeeeEEEEc-----ccCCCCCCCCeeecC--CC--eEEEEEeeccccCccccccccccHHHHHHHHHHH
Q 009784 253 S-YVHGSTELLGLQID-----AAINSGNSGGPAFND--KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDY 318 (526)
Q Consensus 253 ~-~~~~~~~~~~i~~d-----a~i~~G~SGGPlvn~--~G--~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l 318 (526)
. +........+|.+. ...+.|+|||||+.. +| .++||++.+..-......+...-+....++|++.
T Consensus 479 ~~~~~~~~~~~~iCAg~~~g~~d~C~GDSGGPLv~~~~~~~~~lvGIvS~G~~C~~~~~PgVYTrVs~y~~WI~~~ 554 (565)
T 2xrc_A 479 KFYGNRFYEKEMECAGTYDGSIDACKGDSGGPLVCMDANNVTYVWGVVSWGENCGKPEFPGVYTKVANYFDWISYH 554 (565)
T ss_dssp HHHTTSCCTTTEEEEEEC----------CCCEEEEECTTCCEEEEEEECC------CCCCEEEEEGGGGHHHHHHH
T ss_pred HhhccCcCCCceEEeCCCCCCCccCCCccccceEEEeCCCcEEEEEEEeeCCCCCCCCCCEEEEEHHHHHHHHHHH
Confidence 1 11100111134432 356889999999853 45 4899998764211111223334444455555554
No 158
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=98.81 E-value=8.6e-09 Score=113.35 Aligned_cols=79 Identities=16% Similarity=0.341 Sum_probs=66.6
Q ss_pred hhcCC--CCccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECC
Q 009784 345 AMSMK--ADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDS 421 (526)
Q Consensus 345 ~lgl~--~~~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G 421 (526)
.+|+. .+..|++|.+|.++|||++ ||++||+|++|||++| +..++. ..+...++|++|+|+|.|+|
T Consensus 486 ~lG~~~~~~~~gv~V~~V~~~spA~~AGL~~GD~I~aInG~~v-~~~~l~----------~~l~~~~~g~~v~l~v~R~g 554 (597)
T 4fgm_A 486 NFGAKYKASPQGLDVLNVYHDESAYHAGLSAGDKIIAIDHLQA-TEQSVK----------RILERYIPGDTVTIHAFRRD 554 (597)
T ss_dssp CCSEEEEEETTEEEEEEECTTSHHHHHTCCTTCEEEEETTEEC-CTTTHH----------HHHTTCCTTCEEEEEEEETT
T ss_pred ccceEEeccCCeEEEEEeCCCChHHHCCCCCCCEEEEECCEEC-CHHHHH----------HHHHhcCCCCEEEEEEEECC
Confidence 45553 2345899999999999999 9999999999999999 577754 66766678999999999999
Q ss_pred EEEEEEEEecccc
Q 009784 422 KILNFNITLATHR 434 (526)
Q Consensus 422 ~~~~~~v~l~~~~ 434 (526)
+.+++++++...+
T Consensus 555 ~~~~~~v~l~~~~ 567 (597)
T 4fgm_A 555 ELMTLELTWQEPA 567 (597)
T ss_dssp EEEEEEEECCCCC
T ss_pred EEEEEEEEecCCC
Confidence 9999999987653
No 159
>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A
Probab=98.81 E-value=8.3e-09 Score=110.73 Aligned_cols=83 Identities=20% Similarity=0.312 Sum_probs=60.0
Q ss_pred CCCccccCCC------cceEEEEEEEeCCEEEecccccCCC---CeEEEEEcCCCcEEEEEEEEecc-------------
Q 009784 137 FSLPWQRKRQ------YSSSSSGFAIGGRRVLTNAHSVEHY---TQVKLKKRGSDTKYLATVLAIGT------------- 194 (526)
Q Consensus 137 ~~~P~~~~~~------~~~~GSGfvI~~g~ILT~aHvV~~~---~~i~V~~~~~g~~~~a~vv~~d~------------- 194 (526)
..+||+.... ....|.|.+|++.||||+|||+... ..+.|.+....+.+..+-+..++
T Consensus 224 ~~~Pw~v~l~~~~~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~v~~i~~Hp~y~~~~~~~~~~~ 303 (497)
T 1rrk_A 224 HKQPWQAKISVIRPSKGHESCMGAVVSEYFVLTAAHCFTVDDKEHSIKVSVGGEKRDLEIEVVLFHPNYNINGKKEAGIP 303 (497)
T ss_dssp HHSTTEEEEEECC--CCCEEEEEEECSSSEEEECGGGCCTTCCGGGEEEEETTCSSCEEEEEEEECTTCCTTTTGGGTCS
T ss_pred cccCcEEEEEEEcCCCCCceeEEEEecCCEEEECHHhCCCCCCceEEEEEeCCccceeeeEEEEeCCCcccccccccccc
Confidence 4577876432 3458999999999999999999753 46888886434556655555543
Q ss_pred ---CCCeEEEEecccc-cccCceeeecCC
Q 009784 195 ---ECDIAMLTVEDDE-FWEGVLPVEFGE 219 (526)
Q Consensus 195 ---~~DlAlLkv~~~~-~~~~~~pl~l~~ 219 (526)
.+||||||++.+. +...+.|+.|..
T Consensus 304 ~~~~nDIALl~L~~~v~~~~~v~picLp~ 332 (497)
T 1rrk_A 304 EFYDYDVALIKLKNKLKYGQTIRPICLPC 332 (497)
T ss_dssp SCCTTCCEEEEESSCCCCBTTBCCCBCTT
T ss_pred ccCCCcEEEEEECCCCcCCCCeeeeeCCC
Confidence 3599999998763 455688888874
No 160
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=98.80 E-value=3.7e-09 Score=86.95 Aligned_cols=60 Identities=25% Similarity=0.377 Sum_probs=50.2
Q ss_pred ccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCC--CCcccccccchhhhhhhhhcCCCCEEEEEEEECCEE
Q 009784 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~--~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~ 423 (526)
..|++|.+|.++|||++ ||++||+|++|||+++.+. .++. .++.. .|+++.|+|.|.+..
T Consensus 27 ~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~----------~~l~~--~~~~v~l~v~r~~~~ 89 (90)
T 2he4_A 27 RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVV----------ASIKA--REDEARLLVVGPSTR 89 (90)
T ss_dssp SSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTSCHHHHH----------HHHTT--SSSEEEEEEECCCCC
T ss_pred CCCEEEEEECCCChHHHCCCCCCCEEEEECCEECCCCCHHHHH----------HHHHc--CCCcEEEEEEccCCC
Confidence 46899999999999999 9999999999999999987 4432 44443 389999999998753
No 161
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=98.80 E-value=5.2e-09 Score=87.00 Aligned_cols=62 Identities=18% Similarity=0.265 Sum_probs=49.9
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEE
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~ 423 (526)
..|++|.+|.++|||++ | |++||+|++|||+++.+..... ....+ ...|+++.|+|.|+|+.
T Consensus 28 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~--------~~~~~--~~~g~~v~l~v~R~~~~ 91 (95)
T 2vwr_A 28 EPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPEL--------AAQII--QASGERVNLTIARPGKP 91 (95)
T ss_dssp SCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHH--------HHHHH--HHCCSEEEEEEEEESCS
T ss_pred CCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHH--HcCCCEEEEEEEcCCcC
Confidence 46899999999999999 9 9999999999999998765432 11222 23689999999998753
No 162
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*
Probab=98.79 E-value=1.9e-08 Score=113.20 Aligned_cols=192 Identities=14% Similarity=0.163 Sum_probs=105.8
Q ss_pred eeeeCCCCCCccccC------CCcceEEEEEEEeCCEEEecccccCC---CCeEEEEEcCCCcEEEEEEEEecc------
Q 009784 130 CVHTEPNFSLPWQRK------RQYSSSSSGFAIGGRRVLTNAHSVEH---YTQVKLKKRGSDTKYLATVLAIGT------ 194 (526)
Q Consensus 130 ~~~~~~~~~~P~~~~------~~~~~~GSGfvI~~g~ILT~aHvV~~---~~~i~V~~~~~g~~~~a~vv~~d~------ 194 (526)
.........+||... ......|+|.+|++.||||+|||+.. ...+.|.+......+..+-+..++
T Consensus 459 ~~~~~~~~~~Pw~~~v~~~~~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~v~~i~~Hp~y~~~~ 538 (741)
T 3hrz_D 459 HRKGTDYHKQPWQAKISVIRPSKGHESCMGAVVSEYFVLTAAHCFTVDDKEHSIKVSVGGEKRDLEIEVVLFHPNYNING 538 (741)
T ss_dssp C---CCTTTCTTEEEEEECCCC-----EEEEECSSSEEEECGGGCC-----CCEEEEETTCSCCEEEEEEEECTTCCTTT
T ss_pred cCCcccccCcCCeEEEEEEeCCCCCCEEEEEEecCCEEEEchhhccccCCcceEEEEeCCCceEEEEEEEEECCCCCccc
Confidence 344556677999432 12346799999999999999999974 456888886455666666565554
Q ss_pred ----------CCCeEEEEecccc-cccCceeeecCCCC--------cCCCcEEEEeeCCCCCc--------------eeE
Q 009784 195 ----------ECDIAMLTVEDDE-FWEGVLPVEFGELP--------ALQDAVTVVGYPIGGDT--------------ISV 241 (526)
Q Consensus 195 ----------~~DlAlLkv~~~~-~~~~~~pl~l~~~~--------~~g~~V~~iG~p~~~~~--------------~sv 241 (526)
.+||||||++.+. +...+.|+.|.... ..+..+.+.|+...... ...
T Consensus 539 ~~~~~~~~~~~nDIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~~~~~~~~gwg~~~~~~~~~~~~~~~~~~L~~~ 618 (741)
T 3hrz_D 539 KKEAGIPEFYDYDVALIKLKNKLKYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEELLPAQDIKALFVSEEEKKLTRK 618 (741)
T ss_dssp TGGGTCSCCCTTCCEEEEESSCCCCCSSCCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCSSEEEEEEEEESSSCEEEE
T ss_pred ccccccCCccCCcEEEEEECCcCcCCCCccccccCCcccccchhccCCCCccccccccccccccccceeccccccccccc
Confidence 3499999998763 44567888886321 22333434443221111 112
Q ss_pred EEEEEe---ceeeee-------cc-----CCceeeeEEEEc-------ccCCCCCCCCeeecC-CC--eEEEEEeecccc
Q 009784 242 TSGVVS---RIEILS-------YV-----HGSTELLGLQID-------AAINSGNSGGPAFND-KG--KCVGIAFQSLKH 296 (526)
Q Consensus 242 ~~GiVs---~~~~~~-------~~-----~~~~~~~~i~~d-------a~i~~G~SGGPlvn~-~G--~VVGI~~~~~~~ 296 (526)
..-+++ ...+.. +. .......+|++. ...+.|+|||||+.. +| .++||++.+...
T Consensus 619 ~v~i~~~~~~~~C~~~~~~~~~~~~~~~~~~~i~~~~lCag~~~~~~~~~~C~GDSGGPL~~~~~~~~~lvGIvS~G~~~ 698 (741)
T 3hrz_D 619 EVYIKNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVHKRSRFIQVGVISWGVVD 698 (741)
T ss_dssp EEEEECSTTHHHHHHGGGGSTTCTTCSSGGGTSCTTEEEEESSSSSCCCCCCGGGTTCEEEEEETTEEEEEEEEEEESSC
T ss_pred eeEeecCcccchhhhhhhhccccccccccccccCCCeEecCCcCCCCCCCcCcCcccCceEEeeCCeEEEEEEEeecCCc
Confidence 222222 001110 00 001112356652 347889999999864 34 399999887511
Q ss_pred C-cc----ccc-----cccccHHHHHHHHHHHHHc
Q 009784 297 E-DV----ENI-----GYVIPTPVIMHFIQDYEKN 321 (526)
Q Consensus 297 ~-~~----~~~-----~~aIP~~~i~~~l~~l~~~ 321 (526)
. +. ..- ++..-+...+++|++..+.
T Consensus 699 ~C~~~~~~~~p~~~~~~vyt~V~~~~~WI~~~i~~ 733 (741)
T 3hrz_D 699 VCKNQKRQKQVPAHARDFHINLFQVLPWLKEKLQD 733 (741)
T ss_dssp CCC------CCCTTCEEEEEEGGGSHHHHHHHTTT
T ss_pred ccCCcccccCCCCCccceEEEhHHhHHHHHHHhcC
Confidence 1 11 111 4555577777888776653
No 163
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=98.78 E-value=4e-09 Score=86.22 Aligned_cols=59 Identities=15% Similarity=0.274 Sum_probs=49.3
Q ss_pred ccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCC--CCcccccccchhhhhhhhhcCCCCEEEEEEEECCE
Q 009784 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~--~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~ 422 (526)
..|++|.+|.++|||++ ||++||+|++|||+++.+. .++. .++... . +++.|+|.|+|+
T Consensus 25 ~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~----------~~l~~~-~-~~v~l~v~R~~~ 86 (87)
T 2pa1_A 25 HTPIMVTKVAERGKAKDADLRPGDIIVAINGESAEGMLHAEAQ----------SKIRQS-P-SPLRLQLDRITS 86 (87)
T ss_dssp TEEEEEEEECSSSHHHHTTCCTTCEEEEETTEESTTCCHHHHH----------HHHHTC-C-SSEEEEEEECCC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HHHHcC-C-CeEEEEEEecCC
Confidence 36899999999999999 9999999999999999983 5542 455443 3 889999999985
No 164
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.78 E-value=6.6e-09 Score=99.37 Aligned_cols=84 Identities=20% Similarity=0.237 Sum_probs=66.7
Q ss_pred ccccCceeeeccChhHHhhhcCCCCccceEEEEeCCCCcccC-CCCC-CcEEEEECCEEecCCCCcccccccchhhhhhh
Q 009784 327 FPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKP-SDIILSFDGIDIANDGTVPFRHGERIGFSYLV 404 (526)
Q Consensus 327 ~~~LGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~~~spA~~-GL~~-GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l 404 (526)
+.++|+.+..+ +++.+ ...|++|.+|.++|||++ ||++ ||+|++|||+ +.++.++. ..+
T Consensus 94 ~~~lGi~~~~~-~~~~~-------~~~Gv~V~~V~~~spA~~aGl~~~GD~I~~ing~-v~~~~~l~----------~~l 154 (209)
T 3rle_A 94 QGLLGVSIRFC-SFDGA-------NENVWHVLEVESNSPAALAGLRPHSDYIIGADTV-MNESEDLF----------SLI 154 (209)
T ss_dssp SSSSCEEEEEE-ECTTG-------GGSCEEEEEECTTSHHHHHTCCTTTEEEEEESSC-CCSSSCHH----------HHH
T ss_pred cCccceEEeec-ChhHc-------cccceEEEEeCCCChHHHCCCCCCCCEEEECCCE-eCCHHHHH----------HHH
Confidence 56899988876 33322 126899999999999999 9999 9999999998 99999874 666
Q ss_pred hhcCCCCEEEEEEEECCE--EEEEEEEe
Q 009784 405 SQKYTGDSAAVKVLRDSK--ILNFNITL 430 (526)
Q Consensus 405 ~~~~~G~~v~l~v~R~G~--~~~~~v~l 430 (526)
... +|+++.|+|+|++. ..++++++
T Consensus 155 ~~~-~g~~v~l~v~r~~~~~~~~v~l~p 181 (209)
T 3rle_A 155 ETH-EAKPLKLYVYNTDTDNCREVIITP 181 (209)
T ss_dssp HHT-TTSCEEEEEEETTTTEEEEEEECC
T ss_pred HhC-CCCeEEEEEEECCceEEEEEEEEe
Confidence 655 89999999999764 45555544
No 165
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.77 E-value=3.8e-09 Score=88.94 Aligned_cols=73 Identities=18% Similarity=0.191 Sum_probs=58.4
Q ss_pred ccCceeeeccChhHHhhhcCCCCccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhc
Q 009784 329 LLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQK 407 (526)
Q Consensus 329 ~LGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~ 407 (526)
.+|+.+.... +...|++|.+|.++|||++ ||++||+|++|||+++.++.+. ..+...
T Consensus 22 ~lG~~~~~~~-----------~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~-----------~~~~~~ 79 (101)
T 1uez_A 22 GLGFSIRGGS-----------EHGVGIYVSLVEPGSLAEKEGLRVGDQILRVNDKSLARVTHA-----------EAVKAL 79 (101)
T ss_dssp CSSEEEEECT-----------TTTCCEEEEEECTTSHHHHHTCCSSCCEEEETTEECSSCCHH-----------HHHHHS
T ss_pred cccEEEeCCC-----------CCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHH-----------HHHHhh
Confidence 4677776441 1246899999999999999 9999999999999999998763 344444
Q ss_pred CCCCEEEEEEEECCEE
Q 009784 408 YTGDSAAVKVLRDSKI 423 (526)
Q Consensus 408 ~~G~~v~l~v~R~G~~ 423 (526)
+.++++.|+|+|+|+.
T Consensus 80 ~~~~~v~l~v~R~g~~ 95 (101)
T 1uez_A 80 KGSKKLVLSVYSAGRI 95 (101)
T ss_dssp SSSSSCCEEECCCCCC
T ss_pred cCCCeEEEEEEECCcc
Confidence 5678899999998863
No 166
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.77 E-value=2e-09 Score=89.45 Aligned_cols=61 Identities=18% Similarity=0.269 Sum_probs=50.7
Q ss_pred ccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCC--CCcccccccchhhhhhhhhcCCCCEEEEEEEECCEEE
Q 009784 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKIL 424 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~--~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~~ 424 (526)
..|++|.+|.++|||++ ||++||+|++|||+++.+. .++. ..+... ++++.|+|+|+|+..
T Consensus 29 ~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~----------~~l~~~--~~~v~l~v~R~g~~~ 92 (94)
T 1vb7_A 29 HTPIIVTKVTERGKAEAADLRPGDIIVAINGQSAENMLHAEAQ----------SKIRQS--ASPLRLQLDRSSGPS 92 (94)
T ss_dssp TEEEECCCBCTTSSHHHHTCCTTCEEEEETTEECTTCCHHHHH----------HHHHTC--CSSEEEEEECCCCCC
T ss_pred CCCeEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHH----------HHHHhC--CCcEEEEEEECCcCC
Confidence 46899999999999999 9999999999999999987 4432 444443 388999999998753
No 167
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=98.77 E-value=5.2e-09 Score=91.80 Aligned_cols=62 Identities=16% Similarity=0.287 Sum_probs=53.6
Q ss_pred ccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCC--CCcccccccchhhhhhhhhcCCCCEEEEEEEECCEE
Q 009784 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~--~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~ 423 (526)
..|++|.+|.++|||++ ||++||+|++|||++|.++ .++. ..+....+|++++|+|.|+++.
T Consensus 50 ~~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~~~----------~~l~~~~~g~~v~l~v~R~~~~ 114 (124)
T 3tsv_A 50 DVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAV----------LFLLDLPKGEEVTILAQKKKDV 114 (124)
T ss_dssp TSCEEEEEECTTCHHHHTTCCTTEEEEEETTEECSSCCHHHHH----------HHHHHSCTTCEEEEEEEECHHH
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HHHHhcCCCCEEEEEEEECCch
Confidence 36899999999999999 9999999999999999988 5543 5566657899999999998764
No 168
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=98.76 E-value=1.2e-09 Score=91.01 Aligned_cols=62 Identities=15% Similarity=0.243 Sum_probs=51.3
Q ss_pred ccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCC--CCcccccccchhhhhhhhhcCCCCEEEEEEEECCEEEE
Q 009784 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILN 425 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~--~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~~~ 425 (526)
..|++|.+|.++|||++ ||++||+|++|||+++.+. .++. ..+.. .|+++.|+|.|+|+...
T Consensus 29 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~----------~~l~~--~g~~v~l~v~r~~~~~~ 93 (96)
T 2v90_A 29 RPGQFLWEVDPGLPAKKAGMQAGDRLVAVAGESVEGLGHEETV----------SRIQG--QGSCVSLTVVDPEADRE 93 (96)
T ss_dssp CEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHH----------HHHHT--TTTEEEEEEECCCTTSC
T ss_pred CCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HHHHc--CCCEEEEEEECCCCccc
Confidence 46899999999999999 9999999999999999884 3432 44444 39999999999987543
No 169
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=98.76 E-value=5e-09 Score=91.77 Aligned_cols=82 Identities=20% Similarity=0.216 Sum_probs=58.7
Q ss_pred ccccCceeeeccChhHHhhhcCCCCccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecC--CCCcccccccchhhhh
Q 009784 327 FPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSY 402 (526)
Q Consensus 327 ~~~LGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~--~~~l~~~~~~~~~~~~ 402 (526)
++++|+.+... +....+.++++ ...|++|.+|.++|||++ | |++||+|++|||++|.+ ..++. .
T Consensus 35 ~~~lGi~v~~~-~~~~~~~~~~~-~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~----------~ 102 (123)
T 2iwq_A 35 SKSLGISIVGG-RGMGSRLSNGE-VMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAV----------E 102 (123)
T ss_dssp TSCCSEEEEEC-C---------C-CCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHH----------H
T ss_pred CCCccEEEEec-cCccccccccC-CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHH----------H
Confidence 56899999876 33333333443 357999999999999999 9 99999999999999988 44432 4
Q ss_pred hhhhcCCCCEEEEEEEECCE
Q 009784 403 LVSQKYTGDSAAVKVLRDSK 422 (526)
Q Consensus 403 ~l~~~~~G~~v~l~v~R~G~ 422 (526)
++... +++++|+|.|.+.
T Consensus 103 ~l~~~--~~~v~l~v~r~~~ 120 (123)
T 2iwq_A 103 AIRKA--GNPVVFMVQSIIS 120 (123)
T ss_dssp HHHHC--CSSEEEEEECCCC
T ss_pred HHHcC--CCeEEEEEEECCc
Confidence 45443 5689999999764
No 170
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=98.76 E-value=1.2e-08 Score=86.79 Aligned_cols=62 Identities=16% Similarity=0.231 Sum_probs=53.0
Q ss_pred ccceEEEEeCCCCcccCCCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEE
Q 009784 352 QKGVRIRRVDPTAPESEVLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~ 423 (526)
..|++|.+|.++|||+.||++||+|++|||+++.++.++. ..+.....|+++.|+|.|+|+.
T Consensus 38 ~~gv~V~~V~~~spA~agl~~GD~I~~vng~~v~~~~~~~----------~~~~~~~~g~~v~l~v~R~~~~ 99 (107)
T 2h2b_A 38 ETSIVISDVLKGGPAEGQLQENDRVAMVNGVSMDNVEHAF----------AVQQLRKSGKNAKITIRRKKGG 99 (107)
T ss_dssp CCCEEEEEECTTSTTBTTBCTTCEEEEETTEECTTCCHHH----------HHHHHHTCCSEEEEEEEEESCC
T ss_pred CCCEEEEEECCCCchhhCCCCCCEEEEECCEECCCccHHH----------HHHHhhCCCCEEEEEEEECCCC
Confidence 4689999999999998899999999999999999987753 3343446799999999998864
No 171
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=98.75 E-value=5.4e-10 Score=96.41 Aligned_cols=67 Identities=22% Similarity=0.326 Sum_probs=54.2
Q ss_pred ccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCC--CCcccccccchhhhhhhhhcCCCCEEEEEEEECCEEEEEEE
Q 009784 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNI 428 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~--~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~~~~~v 428 (526)
..|++|.+|.++|||++ ||++||+|++|||+++.+. .++ ...+.. .|+++.|+|.|+|+..++++
T Consensus 37 ~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~----------~~~l~~--~g~~v~l~v~R~~~~~~~~~ 104 (114)
T 2edz_A 37 TDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQV----------VELVRK--SGNSVTLLVLDGDSYEKAVK 104 (114)
T ss_dssp CCSCEEECCCTTCTTGGGTCCTTCEEEEESSSBCSSSCHHHH----------HHHHHH--TCSEEEEEEECHHHHHHHHH
T ss_pred CCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHH----------HHHHHc--CCCEEEEEEEECCcceehhh
Confidence 47899999999999999 9999999999999999885 332 234433 49999999999988765554
Q ss_pred Ee
Q 009784 429 TL 430 (526)
Q Consensus 429 ~l 430 (526)
++
T Consensus 105 ~~ 106 (114)
T 2edz_A 105 NQ 106 (114)
T ss_dssp HT
T ss_pred cC
Confidence 43
No 172
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.75 E-value=2.4e-09 Score=94.31 Aligned_cols=70 Identities=21% Similarity=0.177 Sum_probs=59.2
Q ss_pred cceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEEEEEEEEec
Q 009784 353 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLA 431 (526)
Q Consensus 353 ~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~~~~~v~l~ 431 (526)
.|++|.+|.++|||++ ||++||+|++|||+++.+..+ . +++...+.++.+.|+|.|+|+..++++++.
T Consensus 46 ~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~-~----------~~~~~~~~~~~v~l~v~R~g~~~~~~v~~~ 114 (128)
T 1uf1_A 46 LGIYITGVDPGSEAEGSGLKVGDQILEVNGRSFLNILH-D----------EAVRLLKSSRHLILTVKDVGRLPHARTTVD 114 (128)
T ss_dssp CCCEEEEECTTCHHHHHTCCTTCEEEEETTEECSSCCH-H----------HHHHHHTTCSEEEEEEECCSCCSSCSCCCC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCH-H----------HHHHHHhcCCeEEEEEEECCcccccccccc
Confidence 5899999999999999 999999999999999998765 2 344444567899999999999888777776
Q ss_pred cc
Q 009784 432 TH 433 (526)
Q Consensus 432 ~~ 433 (526)
+.
T Consensus 115 ~~ 116 (128)
T 1uf1_A 115 ET 116 (128)
T ss_dssp SS
T ss_pred cc
Confidence 54
No 173
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.75 E-value=1.4e-08 Score=83.53 Aligned_cols=59 Identities=22% Similarity=0.388 Sum_probs=48.2
Q ss_pred ccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEEC
Q 009784 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRD 420 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~ 420 (526)
..|++|.+|.++|||++ ||++||+|++|||+++.++.+.. ....+ ...|+++.|+|.|+
T Consensus 31 ~~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~--------~~~~~--~~~g~~v~l~v~R~ 90 (91)
T 1m5z_A 31 EKGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRDFDCCL--------VVPLI--AESGNKLDLVISRN 90 (91)
T ss_dssp SSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHH--------HHHHH--HTSTTEEEEEEEEC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHH--HcCCCEEEEEEEeC
Confidence 36899999999999999 99999999999999999876532 11222 24689999999996
No 174
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=98.75 E-value=6.5e-09 Score=86.86 Aligned_cols=61 Identities=25% Similarity=0.340 Sum_probs=49.3
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCE
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~ 422 (526)
..|++|.+|.++|||++ | |++||+|++|||+++.+..... +..++.. +|+++.|+|.|+|+
T Consensus 36 ~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~--------~~~~l~~--~g~~v~l~v~R~g~ 98 (98)
T 1ihj_A 36 TTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQA--------VIDLIKE--ADFKIELEIQTFDK 98 (98)
T ss_dssp EEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHH--------HHHHHHH--SCSEEEEEEEEC--
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHhc--CCCeEEEEEEeCCC
Confidence 46899999999999999 9 9999999999999999873321 2244443 79999999999985
No 175
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.75 E-value=1.5e-09 Score=91.72 Aligned_cols=69 Identities=16% Similarity=0.169 Sum_probs=54.7
Q ss_pred ccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEEEEEEEEe
Q 009784 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITL 430 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~~~~~v~l 430 (526)
..+++|.+|.++|||++ ||++||+|++|||+++.++.... +...+.. .|+++.|+|.|+|+..++++++
T Consensus 28 ~~~v~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~--------~~~~~~~--~g~~v~l~v~R~g~~~~~~v~p 97 (103)
T 1wf7_A 28 NMPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLE--------AQNKIKA--CTGSLNMTLQRASAAAKSEPVS 97 (103)
T ss_dssp TEEEEECCCCTTCHHHHTTCCTTCBEEEETTEECSSCCHHH--------HHHHHHH--CSSEEEEEECCCSCCCCCCCCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCeEEEEEEeCCCcCCCCCCC
Confidence 35689999999999999 99999999999999999874321 1122322 4889999999999887766554
No 176
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=98.75 E-value=1.8e-09 Score=90.41 Aligned_cols=61 Identities=25% Similarity=0.409 Sum_probs=50.9
Q ss_pred ccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecC--CCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEE
Q 009784 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~--~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~ 423 (526)
..|++|.+|.++|||++ ||++||+|++|||+++.+ ..++. .++... .|+.+.++|.|+|+.
T Consensus 32 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~----------~~l~~~-~~~~~~l~v~R~g~~ 95 (98)
T 2jxo_A 32 KPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVV----------SAIRAG-GDETKLLVVDRETDE 95 (98)
T ss_dssp SSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHH----------HHHHTT-TTEEEEEECCHHHHH
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HHHHhC-CCcEEEEEEECCchh
Confidence 35899999999999999 999999999999999998 55542 555554 788888999998753
No 177
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.74 E-value=1.8e-09 Score=93.90 Aligned_cols=63 Identities=17% Similarity=0.304 Sum_probs=53.8
Q ss_pred CccceEEEEeCC--CCcccC-CCCCCcEEEEECCEEecCC--CCcccccccchhhhhhhhhcCCCCEEEEEEEECCEEEE
Q 009784 351 DQKGVRIRRVDP--TAPESE-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILN 425 (526)
Q Consensus 351 ~~~Gv~V~~V~~--~spA~~-GL~~GDvIl~vnG~~I~~~--~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~~~ 425 (526)
...|++|..|.+ ++||++ ||++||+|++|||++|.++ .++. ..+... |+++.|+|.|+|+..+
T Consensus 42 ~~~gv~V~~V~~~~~spA~~aGL~~GD~Il~Vng~~v~~~~~~dl~----------~~l~~~--g~~v~l~v~R~g~~~~ 109 (118)
T 2yub_A 42 YATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEEVE----------DAIKQT--SQTLQLLIEHDPVPQR 109 (118)
T ss_dssp SCCEEEEEECCTTTSCTTHHHHCCTTCCEEEESSSBTTTSCHHHHH----------HHHHCC--SSCEEEEEEECSSCCC
T ss_pred CCCcEEEEEecCCCCChHHHcCCCCCCEEEEECCEECCCcCHHHHH----------HHHHhC--CCEEEEEEEECCEEEe
Confidence 357999999999 999999 9999999999999999998 6653 455443 8899999999998754
No 178
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.74 E-value=2.1e-09 Score=94.40 Aligned_cols=82 Identities=15% Similarity=0.157 Sum_probs=64.7
Q ss_pred cccCceeeeccChhHHhhhcCCCCccceEEEEeCCCCcccC-CC-CCCcEEEEECCEEecC--CCCcccccccchhhhhh
Q 009784 328 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VL-KPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYL 403 (526)
Q Consensus 328 ~~LGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~~~spA~~-GL-~~GDvIl~vnG~~I~~--~~~l~~~~~~~~~~~~~ 403 (526)
..+|+.+.... ...|++|.+|.++|||++ || ++||+|++|||+++.+ +.++. .+
T Consensus 20 ~glG~~~~~~~------------~~~~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~----------~~ 77 (127)
T 1b8q_A 20 GGLGFLVKERV------------SKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSAL----------EV 77 (127)
T ss_dssp SCCSCCEEECT------------TSSCEEECCCSSSSSHHHHSSCCTTTCCCEETTEECSSSCHHHHH----------HH
T ss_pred CcEeEEEEecC------------CCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHH----------HH
Confidence 35677766441 235899999999999999 98 9999999999999988 45542 44
Q ss_pred hhhcCCCCEEEEEEEECCEEEEEEEEecc
Q 009784 404 VSQKYTGDSAAVKVLRDSKILNFNITLAT 432 (526)
Q Consensus 404 l~~~~~G~~v~l~v~R~G~~~~~~v~l~~ 432 (526)
+.. ..|+++.|+|.|+|+..++++++..
T Consensus 78 l~~-~~g~~v~l~v~R~g~~~~~~~~~~~ 105 (127)
T 1b8q_A 78 LRG-IASETHVVLILRGPEGFTTHLETTF 105 (127)
T ss_dssp HHS-CCSSCEEEEEECCCCSEEECCCCCC
T ss_pred HHh-CCCCeEEEEEEeCCceEEEEEEEEe
Confidence 544 5789999999999998887776543
No 179
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=98.72 E-value=1.3e-08 Score=86.56 Aligned_cols=70 Identities=14% Similarity=0.161 Sum_probs=53.2
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCE-EEEEEE
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK-ILNFNI 428 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~-~~~~~v 428 (526)
..|++|.+|.++|||++ | |++||+|++|||+++.+..... ....+ ...|+++.|+|.|+++ ...+++
T Consensus 31 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~--------~~~~l--~~~~~~v~l~v~R~~~~~~~~~v 100 (106)
T 4amh_A 31 DNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEE--------AVTAL--KNTSDFVYLKVAKPGSGEKIMEI 100 (106)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHH--------HHHHH--HSCCSEEEEEEECCSSSCSEEEE
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHH--hCCCCeEEEEEEeCCCCCeEEEE
Confidence 46899999999999999 9 9999999999999997754321 11223 3468899999999885 334455
Q ss_pred Eec
Q 009784 429 TLA 431 (526)
Q Consensus 429 ~l~ 431 (526)
++.
T Consensus 101 ~l~ 103 (106)
T 4amh_A 101 KLI 103 (106)
T ss_dssp EEE
T ss_pred EEe
Confidence 554
No 180
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.72 E-value=3.3e-09 Score=89.69 Aligned_cols=74 Identities=18% Similarity=0.216 Sum_probs=57.8
Q ss_pred ccccCceeeeccChhHHhhhcCCCCccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecC--CCCcccccccchhhhhh
Q 009784 327 FPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYL 403 (526)
Q Consensus 327 ~~~LGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~--~~~l~~~~~~~~~~~~~ 403 (526)
...+|+.+..-. +...+++|.+|.++|||++ ||++||+|++|||++|.+ +.++. .+
T Consensus 14 ~~~lG~~l~~g~-----------~~~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~----------~~ 72 (103)
T 1v5l_A 14 PAPWGFRLSGGI-----------DFNQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQ----------DR 72 (103)
T ss_dssp SSCCSBCCEEET-----------TTTEEEECSCBCTTSTTGGGTCCTTCBEEEETTEECSSCCHHHHH----------HH
T ss_pred CCCcCEEEeccc-----------cCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HH
Confidence 456777776431 1235799999999999999 999999999999999998 55542 44
Q ss_pred hhhcCCCCEEEEEEEECCEE
Q 009784 404 VSQKYTGDSAAVKVLRDSKI 423 (526)
Q Consensus 404 l~~~~~G~~v~l~v~R~G~~ 423 (526)
+... |+++.|+|.|+|+.
T Consensus 73 l~~~--g~~v~l~v~R~g~~ 90 (103)
T 1v5l_A 73 IKAA--SYQLCLKIDRAETR 90 (103)
T ss_dssp HTTC--CSEEECEECCCTTT
T ss_pred HHhC--CCeEEEEEEECCeE
Confidence 4443 89999999999874
No 181
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=98.71 E-value=3.9e-09 Score=88.01 Aligned_cols=61 Identities=30% Similarity=0.427 Sum_probs=51.7
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecC--CCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEEE
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKIL 424 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~--~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~~ 424 (526)
..|++|.+|.++|||++ | |++||+|++|||+++.+ ..++. .++.. .|+++.|+|.|+++..
T Consensus 31 ~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~----------~~l~~--~g~~v~l~v~R~~~~~ 95 (97)
T 2jil_A 31 SRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAM----------SILKQ--CGQEAALLIEYDVSET 95 (97)
T ss_dssp CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHH----------HHHHH--SCSEEEEEEEEECCCC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHH----------HHHHc--CCCeEEEEEEeCCCcC
Confidence 46899999999999999 9 99999999999999998 44432 44444 7999999999988653
No 182
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=98.71 E-value=1.8e-08 Score=86.10 Aligned_cols=77 Identities=17% Similarity=0.290 Sum_probs=58.4
Q ss_pred ccCceeeeccChhHHhhhcCCCCccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCC--CCcccccccchhhhhhh
Q 009784 329 LLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLV 404 (526)
Q Consensus 329 ~LGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~--~~l~~~~~~~~~~~~~l 404 (526)
.+|+.+...... .....|++|.+|.++|||++ | |++||+|++|||+++.++ .++ ..++
T Consensus 23 glG~~~~~~~~~--------~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~----------~~~l 84 (111)
T 2koj_A 23 GLGFSITSRDVT--------IGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEV----------VSLL 84 (111)
T ss_dssp BTCEEEEECSCS--------SSSSSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHH----------HHHH
T ss_pred ccCEEEEeccCC--------CCCCcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHH----------HHHH
Confidence 467777654211 01236899999999999999 9 999999999999999775 333 2455
Q ss_pred hhcCCCCEEEEEEEECCEE
Q 009784 405 SQKYTGDSAAVKVLRDSKI 423 (526)
Q Consensus 405 ~~~~~G~~v~l~v~R~G~~ 423 (526)
....+|+.+.|+|.|+|+.
T Consensus 85 ~~~~~g~~v~l~v~R~~~~ 103 (111)
T 2koj_A 85 RSTKMEGTVSLLVFRQEEA 103 (111)
T ss_dssp HHCCCSSEEEEEEEECCCC
T ss_pred HhCCCCCeEEEEEEeCCCC
Confidence 5545699999999999864
No 183
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=98.71 E-value=1.3e-08 Score=89.42 Aligned_cols=68 Identities=25% Similarity=0.403 Sum_probs=57.1
Q ss_pred CccceEEEEeCCCCcccCCCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEEEEEEEEe
Q 009784 351 DQKGVRIRRVDPTAPESEVLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITL 430 (526)
Q Consensus 351 ~~~Gv~V~~V~~~spA~~GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~~~~~v~l 430 (526)
...|++|.+|.++|||++.|++||+|++|||++|.++.++. ..+....+|++++|+| |+|+ +++++
T Consensus 23 ~~~gv~V~~V~~~spA~~aL~~GD~Il~InG~~v~~~~dl~----------~~l~~~~~g~~v~l~V-R~g~---~~v~l 88 (125)
T 2hga_A 23 QPDGVQIDSVVPGSPASKVLTPGLVIESINGMPTSNLTTYS----------AALKTISVGEVINITT-DQGT---FHLKT 88 (125)
T ss_dssp CCCCEEEEEECSSSGGGGTSCTTCEEEEETTEECSSHHHHH----------HHHTTCCTTCEEEEEE-TTEE---EEEEC
T ss_pred CCCceEEEEECCCChHHHhcCCCCEEEEECCEEcCCHHHHH----------HHHHhcCCCCEEEEEE-ECCE---EEEEE
Confidence 35789999999999998779999999999999999988864 5565556899999999 9998 55555
Q ss_pred cc
Q 009784 431 AT 432 (526)
Q Consensus 431 ~~ 432 (526)
..
T Consensus 89 ~~ 90 (125)
T 2hga_A 89 GR 90 (125)
T ss_dssp CB
T ss_pred ec
Confidence 54
No 184
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=98.71 E-value=1.1e-08 Score=86.69 Aligned_cols=70 Identities=11% Similarity=0.121 Sum_probs=49.5
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEEEEEEEE
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNIT 429 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~~~~~v~ 429 (526)
..|++|.+|.++|||++ | |++||+|++|||+++.+..... ....+ ...|+.+.|+|.|+++...+.++
T Consensus 32 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~--------~~~~~--~~~~~~v~l~v~R~~~~~~~~~~ 101 (105)
T 2awx_A 32 DNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEE--------AVTAL--KNTSDFVYLKVAKPTSMYISRHH 101 (105)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHH--------HHHHH--HSCCSEEEEEEECCCC-------
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHH--HcCCCeEEEEEEcCCCCCCcccc
Confidence 46899999999999999 9 9999999999999998754321 11222 23589999999999988877765
Q ss_pred ec
Q 009784 430 LA 431 (526)
Q Consensus 430 l~ 431 (526)
+.
T Consensus 102 p~ 103 (105)
T 2awx_A 102 HH 103 (105)
T ss_dssp --
T ss_pred cc
Confidence 43
No 185
>1yph_C Chymotrypsin A, chain B; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1afq_B* 1ca0_B 1cbw_B 1cho_F 1gct_B 1ab9_B* 1ggd_B* 1gha_F 1ghb_F* 1gmc_F 1gmd_F 1gmh_F 1hja_B 1mtn_B 1n8o_B 1vgc_B* 1gg6_B 2cha_B* 2gch_F 2gct_B ...
Probab=98.70 E-value=1.1e-07 Score=83.64 Aligned_cols=102 Identities=21% Similarity=0.164 Sum_probs=70.0
Q ss_pred eeCCCCCCccccCCC---cceEEEEEEEeCCEEEecccccCCCCeEEEEEcC--------CCcEEEEEEEEecc------
Q 009784 132 HTEPNFSLPWQRKRQ---YSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRG--------SDTKYLATVLAIGT------ 194 (526)
Q Consensus 132 ~~~~~~~~P~~~~~~---~~~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~--------~g~~~~a~vv~~d~------ 194 (526)
......++||+.... ....|+|.+|++.+|||+|||+.+ ..+.|.+.. .++.+..+-+..++
T Consensus 5 ~~a~~~~~Pw~v~l~~~~~~~~CgGsLIs~~~VLTAAHC~~~-~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~ 83 (131)
T 1yph_C 5 EEAVPGSWPWQVSLQDKTGFHFCGGSLINENWVVTAAHCGVT-TSDVVVAGEFDQGSSSEKIQKLKIAKVFKNSKYNSLT 83 (131)
T ss_dssp EECCTTSSTTEEEEECTTSCEEEEEEEEETTEEEECGGGCCC-TTSEEEESCSBTTCSSSCCEEEEEEEEEECTTCCTTT
T ss_pred EECCCCCcCcEEEEEeCCCCEEEEEEEeeCCEEEECHHHCCC-CCeEEEEeEccCCCCCCceEEEEEEEEEeCCCCCCCC
Confidence 344556678876432 235799999999999999999976 445555531 12344444455554
Q ss_pred -CCCeEEEEecccc-cccCceeeecCCCC---cCCCcEEEEeeCC
Q 009784 195 -ECDIAMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPI 234 (526)
Q Consensus 195 -~~DlAlLkv~~~~-~~~~~~pl~l~~~~---~~g~~V~~iG~p~ 234 (526)
.+||||||++.+. +.+.+.|+.|.... ..|+.+++.||..
T Consensus 84 ~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~g~~~~v~GWG~ 128 (131)
T 1yph_C 84 INNDITLLKLSTAASFSQTVSAVCLPSASDDFAAGTTCVTTGWGL 128 (131)
T ss_dssp CCSCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCC
T ss_pred CCCCEEEEEECCcccCCCcCcceECCCcccCCCCCCEEEEEcCCc
Confidence 3699999998763 44568888887533 3578899999864
No 186
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=98.69 E-value=1.1e-08 Score=83.65 Aligned_cols=61 Identities=16% Similarity=0.253 Sum_probs=48.9
Q ss_pred ccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCE
Q 009784 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~ 422 (526)
..+++|.+|.++|||++ ||++||+|++|||+++.++.... +...+.. .|+++.|+|.|+|+
T Consensus 26 ~~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~--------~~~~~~~--~g~~v~l~v~R~g~ 87 (88)
T 2uzc_A 26 NMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQGMTHLE--------AQNKIKG--CTGSLNMTLQRESD 87 (88)
T ss_dssp TEEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHH--------HHHHHHT--CCSEEEEEEECCCC
T ss_pred CCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHHh--CCCeEEEEEEeCCC
Confidence 35899999999999999 99999999999999999884111 1133332 38999999999874
No 187
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.69 E-value=3e-09 Score=91.00 Aligned_cols=69 Identities=20% Similarity=0.239 Sum_probs=54.1
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEEEEEEEE
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNIT 429 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~~~~~v~ 429 (526)
..|++|.+|.++|||++ | |++||+|++|||+++.+..... +...+ ...|+++.|+|.|+++..+++++
T Consensus 35 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~--------~~~~~--~~~~~~v~l~v~R~~~~~~~~v~ 104 (110)
T 1um1_A 35 APGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLR--------AVDLI--RHGGKKMRFLVAKSDVETAKKIH 104 (110)
T ss_dssp CSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHH--------HHHHH--HTCCSEEEEEEECCCHHHHHHHS
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHH--HcCCCeEEEEEEeCCcceeEEEE
Confidence 46899999999999999 9 9999999999999998654432 11222 23589999999999987655544
Q ss_pred e
Q 009784 430 L 430 (526)
Q Consensus 430 l 430 (526)
+
T Consensus 105 ~ 105 (110)
T 1um1_A 105 S 105 (110)
T ss_dssp S
T ss_pred e
Confidence 3
No 188
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=98.68 E-value=7.2e-09 Score=87.91 Aligned_cols=61 Identities=25% Similarity=0.365 Sum_probs=51.5
Q ss_pred ccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCCC--CcccccccchhhhhhhhhcCCCCEEEEEEEECCEEE
Q 009784 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDG--TVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKIL 424 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~~--~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~~ 424 (526)
..|++|..|.++|||++ ||++||+|++|||+++.++. ++. ..+. ..|++++|+|.|+++..
T Consensus 25 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~----------~~l~--~~g~~v~l~v~r~~~~~ 88 (106)
T 3ngh_A 25 TDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVV----------ELVR--KSGNSVTLLVLDGDSYE 88 (106)
T ss_dssp CCSCEEECCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHH----------HHHH--HTTTEEEEEEECHHHHH
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HHHH--hCCCEEEEEEEECCeee
Confidence 46899999999999999 99999999999999999887 432 4444 36899999999987653
No 189
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=98.66 E-value=2.2e-08 Score=82.57 Aligned_cols=61 Identities=21% Similarity=0.217 Sum_probs=48.5
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCE
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~ 422 (526)
..|++|.+|.++|||++ | |++||+|++|||+++.+..... +...+. ..|+++.|+|.|.+.
T Consensus 28 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~--------~~~~~~--~~~~~v~l~v~R~~~ 90 (92)
T 2qg1_A 28 DTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEA--------VAALLK--CSLGTVTLEVGRIST 90 (92)
T ss_dssp SCSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHH--------HHHHHH--HCCSEEEEEEECCCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCeEEEEEEcccc
Confidence 46899999999999999 9 9999999999999998754221 112222 258899999999864
No 190
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=98.65 E-value=1.4e-08 Score=82.38 Aligned_cols=61 Identities=13% Similarity=0.313 Sum_probs=48.0
Q ss_pred ccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCE
Q 009784 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~ 422 (526)
..|++|.+|.++|||++ ||++||+|++|||+++.++.... +...+ ...++++.|+|.|+|+
T Consensus 24 ~~~v~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~--------~~~~~--~~~~~~v~l~v~R~~~ 85 (85)
T 1rgw_A 24 NMPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLE--------AQNKI--KSASYNLSLTLQKSKR 85 (85)
T ss_dssp TSCCBEEEECTTSHHHHSSCCCCSBEEEETTEECTTCCHHH--------HHHHH--TTCSSCEEEEEESCCC
T ss_pred CCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHH--------HHHHH--HcCCCeEEEEEEeCCC
Confidence 35799999999999998 99999999999999999873221 11222 2357789999999874
No 191
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=98.64 E-value=6.2e-09 Score=89.57 Aligned_cols=77 Identities=19% Similarity=0.280 Sum_probs=57.2
Q ss_pred ccCceeeeccChhHHhhhcCCCCccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhc
Q 009784 329 LLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQK 407 (526)
Q Consensus 329 ~LGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~ 407 (526)
-+|+.+.... +...|++|..|.+++||++ ||++||+|++|||+++.++.+.. +...+.
T Consensus 28 ~lG~~l~~~~-----------~~~~gv~V~~V~~~s~A~~aGL~~GD~Il~vng~~v~~~~~~~--------~~~~~~-- 86 (114)
T 1x5n_A 28 GLGCSISSGP-----------IQKPGIFISHVKPGSLSAEVGLEIGDQIVEVNGVDFSNLDHKE--------AVNVLK-- 86 (114)
T ss_dssp CCCEEEEECC-----------SSSCSEEEEEECTTSTTTTTTCCTTCEEEEETTEETTSCCTTH--------HHHHHH--
T ss_pred ceeEEEeecC-----------CCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHh--
Confidence 3677776441 1346899999999999999 99999999999999999987532 112232
Q ss_pred CCCCEEEEEEEEC-CEEEEEE
Q 009784 408 YTGDSAAVKVLRD-SKILNFN 427 (526)
Q Consensus 408 ~~G~~v~l~v~R~-G~~~~~~ 427 (526)
.++++.|+|+|+ |+.++++
T Consensus 87 -~~~~v~l~v~r~~g~~~~~~ 106 (114)
T 1x5n_A 87 -SSRSLTISIVAAAGRELFMT 106 (114)
T ss_dssp -HCSSEEEEECSSTTTHHHHS
T ss_pred -cCCeEEEEEEcCCCCceEEE
Confidence 246899999998 8654433
No 192
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.64 E-value=2.1e-08 Score=84.52 Aligned_cols=60 Identities=25% Similarity=0.454 Sum_probs=49.4
Q ss_pred ccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCCC--CcccccccchhhhhhhhhcCCCCEEEEEEEECCEE
Q 009784 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDG--TVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~~--~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~ 423 (526)
..|++|.+|.++|||++ ||++||+|++|||++|.+.. ++ ...+.. .|+++.|+|+|+++.
T Consensus 29 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~----------~~~l~~--~g~~v~l~v~r~~~~ 91 (102)
T 2d90_A 29 QKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGV----------VEMIRK--GGDQTTLLVLDKEAE 91 (102)
T ss_dssp SSSEEEECCCTTSTTTTTTCCTTCEEEEESSCBCTTSCHHHH----------HHHHHH--STTEEEEEECSTTCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHH----------HHHHHc--CCCEEEEEEEECCCc
Confidence 46899999999999999 99999999999999998863 32 133433 489999999997654
No 193
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=98.64 E-value=4.3e-08 Score=80.81 Aligned_cols=62 Identities=18% Similarity=0.213 Sum_probs=47.5
Q ss_pred cceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEEE
Q 009784 353 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKIL 424 (526)
Q Consensus 353 ~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~~ 424 (526)
.|++|.+|.++|||++ ||++||+|++|||+++.++.... +..++.. .++++.|+|.|++...
T Consensus 24 ~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~--------~~~~l~~--~~~~v~l~v~R~~~~~ 86 (91)
T 2f5y_A 24 SPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVE--------LAHEIRS--CPSEIILLVWRMVPQV 86 (91)
T ss_dssp SSCEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHH--------HHHHHHT--CSSEEEEEEEECC---
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCeEEEEEEeCCCCC
Confidence 5799999999999999 99999999999999999753211 1133332 5778999999988654
No 194
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=98.64 E-value=2.8e-08 Score=80.68 Aligned_cols=60 Identities=13% Similarity=0.209 Sum_probs=48.2
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEE
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLR 419 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R 419 (526)
..|++|.+|.++|||++ | |++||+|++|||+++.++..-. +..++....+|+++.|+|.|
T Consensus 24 ~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~--------~~~~l~~~~~g~~v~l~v~R 85 (85)
T 2i04_A 24 DEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQ--------VVKIFQSIPIGASVDLELCR 85 (85)
T ss_dssp TBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHH--------HHHHHHTSCTTCEEEEEEEC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHhCCCCCeEEEEEEC
Confidence 46799999999999999 9 9999999999999998653211 22555555568999999876
No 195
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=98.64 E-value=2.2e-08 Score=82.11 Aligned_cols=62 Identities=16% Similarity=0.227 Sum_probs=49.0
Q ss_pred ccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEE
Q 009784 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~ 423 (526)
..|++|.+|.++|||++ ||++||+|++|||+++.++.... +...+. ..|+++.|+|.|+++.
T Consensus 26 ~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~--------~~~~~~--~~g~~v~l~v~R~~~~ 88 (89)
T 2q3g_A 26 NVPLSISRLTPGGKAAQAGVAVGDWVLSIDGENAGSLTHIE--------AQNKIR--ACGERLSLGLSRAITS 88 (89)
T ss_dssp TEEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHH--------HHHHHH--TCTTEEEEEEEEECCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--hCCCEEEEEEEeCCCC
Confidence 46899999999999999 99999999999999999763211 112232 2488999999998753
No 196
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.64 E-value=6.9e-08 Score=90.73 Aligned_cols=73 Identities=22% Similarity=0.403 Sum_probs=59.3
Q ss_pred CccceEEEEeCCCCcccCCCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEE---CCEEEEEE
Q 009784 351 DQKGVRIRRVDPTAPESEVLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLR---DSKILNFN 427 (526)
Q Consensus 351 ~~~Gv~V~~V~~~spA~~GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R---~G~~~~~~ 427 (526)
...|++|.+|.++|||++||++||+|++|||+++.+..... ....+ ...|+.+.|+|+| +|+..+++
T Consensus 22 ~~~g~~V~~v~~~spA~~gl~~GD~I~~vng~~v~~~~~~~--------~~~~~--~~~~~~v~l~v~r~~~~G~~~~~~ 91 (195)
T 2qbw_A 22 DDDGIFVTRVQPEGPASKLLQPGDKIIQANGYSFINIEHGQ--------AVSLL--KTFQNTVELIIVREVGNGAKQEIR 91 (195)
T ss_dssp TCCSEEEEEECTTSTTTTTCCTTCEEEEETTEECTTCCHHH--------HHHHH--HHCCSEEEEEEEEECSSSCEEEEE
T ss_pred CCCCEEEEEECCCChHHhCCCCCCEEEEECCEECCCCCHHH--------HHHHH--HcCCCeEEEEEEEcCCCCCCceeE
Confidence 35799999999999999999999999999999999876432 11222 2357799999999 99999998
Q ss_pred EEeccc
Q 009784 428 ITLATH 433 (526)
Q Consensus 428 v~l~~~ 433 (526)
+++...
T Consensus 92 v~~~~~ 97 (195)
T 2qbw_A 92 VRVEKD 97 (195)
T ss_dssp EEEECC
T ss_pred eEeecc
Confidence 888743
No 197
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=98.63 E-value=4.5e-08 Score=81.60 Aligned_cols=61 Identities=11% Similarity=0.193 Sum_probs=49.6
Q ss_pred cceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEE
Q 009784 353 KGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (526)
Q Consensus 353 ~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~ 423 (526)
.|++|.+|.++|||++ | |++||+|++|||+++.++..-. +..++. ..|+++.|+|.|+|+.
T Consensus 30 ~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~--------~~~~l~--~~g~~v~l~v~R~~~~ 92 (97)
T 1n7e_A 30 DPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSE--------AIHLLQ--MAGETVTLKIKKQTDA 92 (97)
T ss_dssp SCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHH--------HHHHHH--TCCSEEEEEEECCCCC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCeEEEEEEeCCCC
Confidence 6899999999999999 9 9999999999999998653111 123343 4799999999998864
No 198
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=98.63 E-value=4.6e-08 Score=82.91 Aligned_cols=63 Identities=21% Similarity=0.271 Sum_probs=50.5
Q ss_pred CccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEE
Q 009784 351 DQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (526)
Q Consensus 351 ~~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~ 423 (526)
...|++|.+|.++|||++ | |++||+|++|||+++.+..... ....+ ...|+++.|+|.|+|+.
T Consensus 36 ~~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~--------~~~~~--~~~g~~v~l~v~R~~~~ 100 (106)
T 3axa_A 36 DKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQER--------AAELM--TRTSSVVTLEVAKQGAI 100 (106)
T ss_dssp SSEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHH--------HHHHH--HTCCSEEEEEEECCCSS
T ss_pred CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHH--HcCCCeEEEEEEeCCcc
Confidence 357999999999999999 9 9999999999999998654321 11222 23799999999998864
No 199
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=98.62 E-value=2.6e-08 Score=86.80 Aligned_cols=61 Identities=16% Similarity=0.341 Sum_probs=50.7
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCC--CCcccccccchhhhhhhhhcCCCCEEEEEEEECCE
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~--~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~ 422 (526)
..|++|.+|.++|||++ | |++||+|++|||+++.++ .++ ..++....+|+++.|+|.|+|+
T Consensus 57 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~----------~~~l~~~~~g~~v~l~v~R~g~ 121 (121)
T 2kom_A 57 SAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEV----------VSLLRSTKMEGTVSLLVFRQED 121 (121)
T ss_dssp SCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHH----------HHHHHHCCSSCEEEEEEEECCC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHH----------HHHHhcCCCCCEEEEEEEeCCC
Confidence 36899999999999999 9 999999999999999875 332 2445554569999999999874
No 200
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=98.62 E-value=5.8e-09 Score=91.92 Aligned_cols=80 Identities=16% Similarity=0.223 Sum_probs=58.4
Q ss_pred ccCceeeeccChhHHhhhcCCCCccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCC--CCcccccccchhhhhhh
Q 009784 329 LLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLV 404 (526)
Q Consensus 329 ~LGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~--~~l~~~~~~~~~~~~~l 404 (526)
.||+.+... ....++.+|+. ...|++|.+|.++|||++ | |++||+|++|||+++.+. .++. .++
T Consensus 43 ~lG~~i~~~-~~~~~~~~g~~-~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~----------~~l 110 (128)
T 1nf3_C 43 PLGFYIRDG-SSVRVTPHGLE-KVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVT----------DMM 110 (128)
T ss_dssp CCCEEEEEE-EEEEEETTEEE-EEEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHHHHH----------HHH
T ss_pred CccEEEEcc-ccccccccccC-CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHH----------HHH
Confidence 467776655 33333444543 346899999999999999 9 999999999999999543 3332 344
Q ss_pred hhcCCCCEEEEEEEECCE
Q 009784 405 SQKYTGDSAAVKVLRDSK 422 (526)
Q Consensus 405 ~~~~~G~~v~l~v~R~G~ 422 (526)
. ..|+++.|+|.|+|+
T Consensus 111 ~--~~~~~v~l~v~r~~~ 126 (128)
T 1nf3_C 111 I--ANSRNLIITVRPANQ 126 (128)
T ss_dssp H--HTTTSEEEEEECCCC
T ss_pred H--cCCCeEEEEEEECCc
Confidence 3 246789999999886
No 201
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.62 E-value=1.5e-08 Score=84.02 Aligned_cols=61 Identities=16% Similarity=0.168 Sum_probs=49.0
Q ss_pred ccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCE
Q 009784 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~ 422 (526)
..+++|.+|.++|||++ ||++||+|++|||+++.++.... +...+. ..|+++.|+|.|+|+
T Consensus 31 ~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~--------~~~~~~--~~g~~v~l~v~R~g~ 92 (94)
T 2eeg_A 31 SAPLTISRVHAGSKAALAALCPGDLIQAINGESTELMTHLE--------AQNRIK--GCHDHLTLSVSSGPS 92 (94)
T ss_dssp TSCCEECCCCSSSHHHHTTCCTTCEEEEETTEETTTCCHHH--------HHHHHH--TCCSCEEEEEECCSS
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCeEEEEEEeCCC
Confidence 36799999999999998 99999999999999999874321 112222 368899999999875
No 202
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=98.62 E-value=3.4e-08 Score=83.26 Aligned_cols=60 Identities=22% Similarity=0.335 Sum_probs=48.9
Q ss_pred cceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCE
Q 009784 353 KGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (526)
Q Consensus 353 ~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~ 422 (526)
.|++|.+|.++|||++ | |++||+|++|||+++.+..... ........|+++.|+|.|+++
T Consensus 35 ~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~----------~~~~~~~~~~~v~l~v~r~~~ 96 (104)
T 3i4w_A 35 EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQ----------AAIALKNAGQTVTIIAQYKPE 96 (104)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHH----------HHHHHHTSCSEEEEEEEECHH
T ss_pred CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHH----------HHHHHHcCCCeEEEEEEECcc
Confidence 5899999999999999 9 9999999999999998766532 112223468999999999864
No 203
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=98.62 E-value=3.5e-08 Score=81.79 Aligned_cols=60 Identities=23% Similarity=0.413 Sum_probs=47.7
Q ss_pred cceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCC--CCcccccccchhhhhhhhhcCCCCEEEEEEEECCEEE
Q 009784 353 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKIL 424 (526)
Q Consensus 353 ~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~--~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~~ 424 (526)
.|++|..|.++|||++ ||++||+|++|||+++.++ .++. .++.. .++.+.+.+.|.+...
T Consensus 29 ~~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~----------~~l~~--~~~~~~~~~~r~~~~~ 91 (95)
T 3r68_A 29 KGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVV----------EMIRK--GGDQTTLLVLDKELER 91 (95)
T ss_dssp CSEEEECCCTTSHHHHHTCCTTEEEEEETTEECTTCCHHHHH----------HHHHT--TTTEEEEEEEECC---
T ss_pred CCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHH----------HHHHh--CCCeEEEEEECCcccc
Confidence 4899999999999999 9999999999999999988 4432 44443 5778888888876543
No 204
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=98.62 E-value=2.9e-08 Score=82.81 Aligned_cols=63 Identities=19% Similarity=0.214 Sum_probs=50.1
Q ss_pred cceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEEEE
Q 009784 353 KGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILN 425 (526)
Q Consensus 353 ~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~~~ 425 (526)
.|++|.+|.++|||++ | |++||+|++|||+++.++.... +...+. ..++++.|+|.|+++..+
T Consensus 30 ~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~--------~~~~~~--~~~~~v~l~v~R~~~~~~ 94 (98)
T 2opg_A 30 GAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDE--------AINVLR--QTPQRVRLTLYRDEAPYK 94 (98)
T ss_dssp CSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHH--------HHHHHH--TCCSEEEEEEEECSSCCC
T ss_pred CCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--hCCCeEEEEEEcCCCCCc
Confidence 5899999999999999 9 9999999999999998865221 112222 346899999999987543
No 205
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.62 E-value=3.5e-08 Score=86.23 Aligned_cols=61 Identities=16% Similarity=0.296 Sum_probs=51.0
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCC--CCcccccccchhhhhhhhhcCCCCEEEEEEEECCE
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~--~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~ 422 (526)
..|++|.+|.+++||++ | |++||+|++|||++|.+. .++ ..++.....|+++.|+|.|++.
T Consensus 43 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~----------~~~l~~~~~g~~v~l~v~R~~~ 107 (123)
T 1ueq_A 43 DEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADV----------VKLFQSVPIGQSVNLVLCRGYP 107 (123)
T ss_dssp SCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHH----------HHHHHTSCTTCEEEEEEEESCC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHH----------HHHHHhCCCCCeEEEEEEeCCC
Confidence 46899999999999999 9 999999999999999854 333 2556555569999999999873
No 206
>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human complement system, glycoprotein, SP, VWFA,; HET: NAG; 1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A*
Probab=98.61 E-value=2.1e-08 Score=108.01 Aligned_cols=158 Identities=16% Similarity=0.141 Sum_probs=88.9
Q ss_pred CCCccccCCC--cceEEEEEEEeCCEEEecccccCCC---CeEEEEEcCC----CcEEEEEEEEecc-------------
Q 009784 137 FSLPWQRKRQ--YSSSSSGFAIGGRRVLTNAHSVEHY---TQVKLKKRGS----DTKYLATVLAIGT------------- 194 (526)
Q Consensus 137 ~~~P~~~~~~--~~~~GSGfvI~~g~ILT~aHvV~~~---~~i~V~~~~~----g~~~~a~vv~~d~------------- 194 (526)
.++||+.... ....|.|.+|++.||||+|||+.+. ..+.|.+... ++.+..+-+..++
T Consensus 233 ~~~Pw~v~l~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~~ 312 (509)
T 2odp_A 233 ERTPWHVTIKPKSQETCRGALISDQWVLTAAHCFRDGNDHSLWRVNVGDPKSQWGKEFLIEKAVISPGFDVFAKKNQGIL 312 (509)
T ss_dssp HHCTTEEEEEC----CEEEEECSSSEEEECGGGC--------CEEEECCTTCTTCEEECEEEEEECTTCCTTTTGGGTCC
T ss_pred CCCCcEEEEEeCCCcEEEEEEEcCCEEEEcHHHcCCCCCcceEEEEeCCcccCCCceeeeEEEEECCCCccccccccccc
Confidence 3578877542 2357999999999999999999753 4567776421 2445554454443
Q ss_pred ---CCCeEEEEecccc-cccCceeeecCCCC--------cCCCcEEEEeeCCCCCc-----------eeEEEEEEe---c
Q 009784 195 ---ECDIAMLTVEDDE-FWEGVLPVEFGELP--------ALQDAVTVVGYPIGGDT-----------ISVTSGVVS---R 248 (526)
Q Consensus 195 ---~~DlAlLkv~~~~-~~~~~~pl~l~~~~--------~~g~~V~~iG~p~~~~~-----------~sv~~GiVs---~ 248 (526)
.+||||||++.+. +...+.|+.|.... ..|..+.+.|+...... ..+...++. .
T Consensus 313 ~~~~nDIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~g~~~~~~g~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 392 (509)
T 2odp_A 313 EFYGDDIALLKLAQKVKMSTHARPICLPCTMEANLALRRPQGSTCRDHENELLNKQSVPAHFVALNGSKLNINLKMGVEW 392 (509)
T ss_dssp CCCTTCCEEEEESSCCCCBTTBCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCSSEEEEEEECTTSCEEEEEEECTHHH
T ss_pred cccCCCeEEEEECCcccCCCCcccccCCCCcccchhhccCCCCccccccccccccccceeeeecccCceeeEEEecCccH
Confidence 3699999998763 45568888887432 22444433333211110 012222322 1
Q ss_pred eeeee--------cc-----CCceeeeEEEEc----ccCCCCCCCCeeecC-CC--eEEEEEeecc
Q 009784 249 IEILS--------YV-----HGSTELLGLQID----AAINSGNSGGPAFND-KG--KCVGIAFQSL 294 (526)
Q Consensus 249 ~~~~~--------~~-----~~~~~~~~i~~d----a~i~~G~SGGPlvn~-~G--~VVGI~~~~~ 294 (526)
..|.. +. .......+|+.. ...|.|+|||||+.. +| .++||++.+.
T Consensus 393 ~~C~~~~~~~~~~~~~~~~~~~~~~~~~iCag~~~~~~~C~GDSGGPL~~~~~~~~~l~GIvS~G~ 458 (509)
T 2odp_A 393 TSCAEVVSQEKTMFPNLTDVREVVTDQFLCSGTQEDESPCKGESGGAVFLERRFRFFQVGLVSWGL 458 (509)
T ss_dssp HHHHHGGGGCTTTCTTCSSGGGTSCTTEEEECCTTCCCCCGGGTTCEEEEEETTEEEEEEEEEEES
T ss_pred HHHHHHhhcccccccccccccccccCCEEEeCCCCCCcccCCCccCceEEEECCeEEEEEEEEEcC
Confidence 12221 10 001122356664 257899999999865 33 4999998765
No 207
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=98.61 E-value=1.4e-08 Score=84.93 Aligned_cols=61 Identities=15% Similarity=0.199 Sum_probs=48.9
Q ss_pred cceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEE
Q 009784 353 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (526)
Q Consensus 353 ~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~ 423 (526)
.|++|.+|.++|||++ ||++||+|++|||+++.+..... +...+. .+|+++.|++.|+|+.
T Consensus 34 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~--------~~~~l~--~~g~~v~l~v~r~~~~ 95 (99)
T 3khf_A 34 VHHVVWSVEDGSPAQEAGLRAGDLITHINGESVLGLVHMD--------VVELLL--KSGNKISLRTTALENT 95 (99)
T ss_dssp EEEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHH--------HHHHHH--HSCSEEEEEEECSCSS
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHh--cCCCEEEEEEEECCCc
Confidence 4789999999999999 99999999999999998433211 113343 4799999999998753
No 208
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=98.61 E-value=4.5e-08 Score=81.62 Aligned_cols=59 Identities=19% Similarity=0.122 Sum_probs=47.6
Q ss_pred cceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECC
Q 009784 353 KGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDS 421 (526)
Q Consensus 353 ~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G 421 (526)
.|++|.+|.++|||++ | |++||+|++|||++|.+..+.. ........++++.|+|.|..
T Consensus 31 ~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~----------~~~~~~~~~~~v~l~v~R~~ 91 (96)
T 2qkv_A 31 IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQV----------SYALFKGANGKVSMEVTRPK 91 (96)
T ss_dssp SSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHH----------HHHHHHTCSSEEEEEEECCC
T ss_pred CcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHH----------HHHHHhcCCCcEEEEEEeCC
Confidence 6899999999999999 9 9999999999999998755432 12222346788999999953
No 209
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=98.61 E-value=4.4e-08 Score=84.08 Aligned_cols=62 Identities=16% Similarity=0.182 Sum_probs=49.6
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEE
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~ 423 (526)
..|++|.+|.++|||++ | |++||+|++|||++|.+..... +...+. ..|+++.|+|.|+|+.
T Consensus 48 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~--------~~~~l~--~~g~~v~l~v~R~~~~ 111 (112)
T 2r4h_A 48 NMDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSR--------AIELIK--NGGRRVRLFLKRGETS 111 (112)
T ss_dssp TCCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHH--------HHHHHH--TTTTEEEEEEECCEEE
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCeEEEEEEeCCcc
Confidence 46899999999999999 9 9999999999999998864321 112222 3689999999998764
No 210
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.61 E-value=2.4e-08 Score=84.46 Aligned_cols=71 Identities=20% Similarity=0.274 Sum_probs=55.1
Q ss_pred cccCceeeeccChhHHhhhcCCCCccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecC--CCCcccccccchhhhhhh
Q 009784 328 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYLV 404 (526)
Q Consensus 328 ~~LGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~--~~~l~~~~~~~~~~~~~l 404 (526)
..+|+.+..-. +...|++|.+|.++|||++ ||++||+|++|||+++.+ +.++. .++
T Consensus 27 ~~lG~~~~~~~-----------~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~----------~~l 85 (104)
T 1wi2_A 27 AQLGFNIRGGK-----------ASQLGIFISKVIPDSDAHRAGLQEGDQVLAVNDVDFQDIEHSKAV----------EIL 85 (104)
T ss_dssp CCCSEEEECCS-----------SSCCCCEEEEECTTSHHHHHTCCTTCEEEEETTEECSSCCHHHHH----------HHH
T ss_pred CCccEEEEccc-----------CCCCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HHH
Confidence 46788876531 1246899999999999999 999999999999999988 34332 334
Q ss_pred hhcCCCCEEEEEEEECCE
Q 009784 405 SQKYTGDSAAVKVLRDSK 422 (526)
Q Consensus 405 ~~~~~G~~v~l~v~R~G~ 422 (526)
.. |+++.|+|.|+..
T Consensus 86 ~~---~~~v~l~v~r~~~ 100 (104)
T 1wi2_A 86 KT---AREISMRVRFFSG 100 (104)
T ss_dssp HH---SSSEEEEEECCCC
T ss_pred hC---CCEEEEEEEECCC
Confidence 33 7889999999754
No 211
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=98.60 E-value=3.7e-08 Score=81.43 Aligned_cols=61 Identities=15% Similarity=0.178 Sum_probs=48.4
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCE
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~ 422 (526)
..|++|.+|.++|||++ | |++||+|++|||+++.++.... +...+ ...++++.|+|.|+|+
T Consensus 32 ~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~--------~~~~~--~~~~~~v~l~v~R~g~ 94 (94)
T 2fe5_A 32 DNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEE--------AVASL--KNTSDMVYLKVAKPGS 94 (94)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHH--------HHHHH--HTCCSEEEEEEECCCC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHH--HcCCCeEEEEEEcCCC
Confidence 46899999999999999 9 9999999999999998863321 11222 2356799999999874
No 212
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=98.60 E-value=4.2e-08 Score=84.98 Aligned_cols=60 Identities=22% Similarity=0.335 Sum_probs=50.2
Q ss_pred cceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCE
Q 009784 353 KGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (526)
Q Consensus 353 ~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~ 422 (526)
.|++|.+|.++|||++ | |++||+|++|||+++.++.+.. ........|+++.|+|.|+++
T Consensus 38 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~----------~~~~~~~~~~~v~l~v~r~~~ 99 (119)
T 1tp5_A 38 EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQ----------AAIALKNAGQTVTIIAQYKPE 99 (119)
T ss_dssp CCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHH----------HHHHHHTSCSEEEEEEEECHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH----------HHHHHHcCCCeEEEEEEECCc
Confidence 6899999999999999 9 9999999999999999886532 222233478999999999764
No 213
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=98.59 E-value=5.7e-08 Score=80.61 Aligned_cols=61 Identities=26% Similarity=0.459 Sum_probs=49.0
Q ss_pred CccceEEEEeCCCCcccCCCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECC
Q 009784 351 DQKGVRIRRVDPTAPESEVLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDS 421 (526)
Q Consensus 351 ~~~Gv~V~~V~~~spA~~GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G 421 (526)
...|++|.+|.++|||++||++||+|++|||+++.+..+.. ....+ ...|+++.|+|.|+.
T Consensus 33 ~~~gv~V~~V~~~spA~~gL~~GD~I~~vng~~v~~~~~~~--------~~~~~--~~~~~~v~l~v~R~~ 93 (95)
T 1mfg_A 33 DDDGIFVTRVQPEGPASKLLQPGDKIIQANGYSFINIEHGQ--------AVSLL--KTFQNTVELIIVREV 93 (95)
T ss_dssp TCCCEEEEEECTTSTTTTTCCTTCEEEEETTEECTTCBHHH--------HHHHH--HHCCSEEEEEEEEEC
T ss_pred CCCCEEEEEECCCCchhhCCCCCCEEEEECCEEcCCCCHHH--------HHHHh--hcCCCeEEEEEEeCC
Confidence 35699999999999999899999999999999998865432 11222 246899999999964
No 214
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=98.59 E-value=4.5e-08 Score=83.36 Aligned_cols=60 Identities=18% Similarity=0.137 Sum_probs=48.0
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECC
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDS 421 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G 421 (526)
..|++|.+|.++|||++ | |++||+|++|||++|.+..+.. ........++++.|+|.|..
T Consensus 24 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~----------~~~~~~~~~~~v~l~v~R~~ 85 (106)
T 2la8_A 24 EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQV----------CYALFKGANGKVSMEVTRPK 85 (106)
T ss_dssp SSSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHH----------HHHHHHSCBSCEEEEEEECC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH----------HHHHHhCCCCeEEEEEEeCC
Confidence 36899999999999999 9 9999999999999998755432 12222346778999999964
No 215
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=98.58 E-value=6.4e-09 Score=89.35 Aligned_cols=69 Identities=10% Similarity=0.177 Sum_probs=54.2
Q ss_pred CccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEEEEEEE
Q 009784 351 DQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNI 428 (526)
Q Consensus 351 ~~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~~~~~v 428 (526)
...|++|.+|.++|||++ | |++||+|++|||+++.+..... ....+.. .|+++.|+|.|+++..++++
T Consensus 33 ~~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~--------~~~~~~~--~g~~v~l~v~R~~~~~~~~v 102 (113)
T 2g5m_B 33 EKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSF--------AASVLRN--TKGRVRFMIGRERPGEQSEV 102 (113)
T ss_dssp CCEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHH--------HHHHHHH--SCSSCEEEEEECCCCTTSSC
T ss_pred CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHhc--CCCeEEEEEEeCCCCCcchh
Confidence 357999999999999999 9 9999999999999998765432 1122322 58999999999998765554
Q ss_pred E
Q 009784 429 T 429 (526)
Q Consensus 429 ~ 429 (526)
+
T Consensus 103 ~ 103 (113)
T 2g5m_B 103 A 103 (113)
T ss_dssp S
T ss_pred h
Confidence 3
No 216
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=98.58 E-value=7.1e-08 Score=79.99 Aligned_cols=80 Identities=13% Similarity=0.231 Sum_probs=57.1
Q ss_pred ccccCceeeeccChhHHhhhcCCCCccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCCCcccccccchhhhhhh
Q 009784 327 FPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLV 404 (526)
Q Consensus 327 ~~~LGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l 404 (526)
...||+.+........ ....|++|.+|.++|||++ | |++||+|++|||+++.++.... +...+
T Consensus 14 ~~~lG~~i~~~~~~~~-------~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~--------~~~~~ 78 (97)
T 2iwn_A 14 VQGLGITIAGYIGDKK-------LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQ--------AVEVL 78 (97)
T ss_dssp TTBSCEEEECCCCC-----------CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHH--------HHHHH
T ss_pred CCCCcEEEEccCCCCC-------CCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHH--------HHHHH
Confidence 3457877765421100 1346899999999999999 9 9999999999999998764321 11222
Q ss_pred hhcCCCCEEEEEEEECCEE
Q 009784 405 SQKYTGDSAAVKVLRDSKI 423 (526)
Q Consensus 405 ~~~~~G~~v~l~v~R~G~~ 423 (526)
. ..|+++.|+|.|+|+.
T Consensus 79 ~--~~~~~v~l~v~r~g~~ 95 (97)
T 2iwn_A 79 R--HTGQTVLLTLMRRGET 95 (97)
T ss_dssp H--TCCSEEEEEEEEEEEC
T ss_pred H--cCCCeEEEEEEeCCCC
Confidence 2 3799999999998753
No 217
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=98.58 E-value=2e-08 Score=84.54 Aligned_cols=63 Identities=16% Similarity=0.192 Sum_probs=50.8
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEEE
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKIL 424 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~~ 424 (526)
..|++|.+|.++|||++ | |++||+|++|||+++.+..... +...+.. .|+++.|+|.|+++..
T Consensus 33 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~--------~~~~~~~--~g~~v~l~v~R~~~~~ 97 (102)
T 2i1n_A 33 DPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSR--------AVEALKE--AGPVVRLVVRRRQPPP 97 (102)
T ss_dssp CCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHH--------HHHHHHH--SCSEEEEEEEEECCCC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCeEEEEEEeCCCCC
Confidence 46999999999999999 9 9999999999999998754321 1123333 6899999999988754
No 218
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=98.57 E-value=2.9e-08 Score=81.47 Aligned_cols=62 Identities=16% Similarity=0.224 Sum_probs=47.7
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECC
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDS 421 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G 421 (526)
..+++|.+|.++|||++ | |++||+|++|||+++.+..... +...+.....+++++|+|.|.+
T Consensus 26 ~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~--------~~~~l~~~~~~~~v~l~v~R~~ 89 (90)
T 2q9v_A 26 GEPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQL--------VVQLMQQAAKQGHVNLTVRQTR 89 (90)
T ss_dssp TSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHH--------HHHHHHHHHHHTEEEEEEEECC
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHhCCCCCeEEEEEEecc
Confidence 35799999999999999 9 9999999999999996533211 2244544434568999999964
No 219
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=98.57 E-value=1.7e-08 Score=85.96 Aligned_cols=62 Identities=15% Similarity=0.351 Sum_probs=50.2
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEE
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~ 423 (526)
..|++|.+|.++|||++ | |++||+|++|||++|.++..-. +..++.. .|+++.|+|.|+++.
T Consensus 43 ~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~--------~~~~l~~--~g~~v~l~v~R~~~~ 106 (108)
T 2jre_A 43 ATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSD--------VVEVLRN--AGNPVRLLLIRRLPL 106 (108)
T ss_dssp CCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHH--------HHHHHHH--HCSEEEEEEEECCCC
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCeEEEEEEeCCcC
Confidence 46899999999999999 9 9999999999999999853211 1233433 689999999999865
No 220
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=98.57 E-value=5.3e-09 Score=90.46 Aligned_cols=62 Identities=16% Similarity=0.263 Sum_probs=50.7
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEec---CCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEEEE
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIA---NDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILN 425 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~---~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~~~ 425 (526)
..|++|.+|.++|||++ | |++||+|++|||+++. ++.++. ..+.. .|+++.|+|.|+|+..+
T Consensus 48 ~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~----------~~l~~--~~~~v~l~v~R~~~~~~ 114 (117)
T 2o2t_A 48 ELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAI----------SILQK--AKDTVQLVIARGSLPQY 114 (117)
T ss_dssp CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHH----------HHHHH--CCSEEEEEEESSCCGGG
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHH----------HHHHc--CCCEEEEEEEeCCccee
Confidence 46899999999999999 9 9999999999999998 433332 33433 68999999999987543
No 221
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=98.56 E-value=5.8e-08 Score=81.50 Aligned_cols=61 Identities=21% Similarity=0.274 Sum_probs=49.2
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCE
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~ 422 (526)
..|++|.+|.++|||++ | |++||+|++|||+++.++.... +...+. ..|+++.|+|.|+++
T Consensus 36 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~--------~~~~~~--~~g~~v~l~v~R~~~ 98 (101)
T 2jik_A 36 DSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQD--------AVDLFR--NAGYAVSLRVQHRLE 98 (101)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHH--------HHHHHH--TCCSEEEEEEEEESC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--hCCCeEEEEEEeCCC
Confidence 46899999999999999 9 9999999999999998864321 112232 358899999999875
No 222
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=98.56 E-value=5.9e-08 Score=81.65 Aligned_cols=74 Identities=14% Similarity=0.110 Sum_probs=56.3
Q ss_pred cccCceeeeccChhHHhhhcCCCCccceEEEEeCCCCcccC--CCCCCcEEEEECCEEe--cCCCCcccccccchhhhhh
Q 009784 328 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE--VLKPSDIILSFDGIDI--ANDGTVPFRHGERIGFSYL 403 (526)
Q Consensus 328 ~~LGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~~~spA~~--GL~~GDvIl~vnG~~I--~~~~~l~~~~~~~~~~~~~ 403 (526)
..||+.+..-.. + ....+++|.+|.+++||++ ||++||+|++|||+++ .++.++. .+
T Consensus 21 ~~lG~~i~~~~~-------~--~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~----------~~ 81 (101)
T 2yt7_A 21 EGLGVALVESGW-------G--SLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQ----------AA 81 (101)
T ss_dssp CCCCEEEEECCC-------S--SSSCCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHH----------HH
T ss_pred CccCEEEEeCCC-------C--CCccCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHH----------HH
Confidence 367887763210 0 1234799999999999998 5999999999999999 6666653 56
Q ss_pred hhhcCCCCEEEEEEEEC
Q 009784 404 VSQKYTGDSAAVKVLRD 420 (526)
Q Consensus 404 l~~~~~G~~v~l~v~R~ 420 (526)
+.....|++|+|+|.|.
T Consensus 82 l~~~~~g~~v~l~v~R~ 98 (101)
T 2yt7_A 82 VRETKSQTSVTLSIVHC 98 (101)
T ss_dssp HHHTTTSSEEEEEECCC
T ss_pred HHhCCCCCeEEEEEEeC
Confidence 66655799999999884
No 223
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.56 E-value=2.6e-08 Score=87.60 Aligned_cols=58 Identities=16% Similarity=0.225 Sum_probs=50.4
Q ss_pred cceEEEEeCCCCcccC-C-CCCCcEEEEECCEEec--CCCCcccccccchhhhhhhhhcCCCCEEEEEEEEC
Q 009784 353 KGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRD 420 (526)
Q Consensus 353 ~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~--~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~ 420 (526)
.+++|.+|.+++||++ | |++||+|++|||++|. ++.++. .++....+|++|+|+|.|+
T Consensus 49 ~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~----------~~l~~~~~G~~v~l~V~R~ 110 (126)
T 1wif_A 49 PYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFL----------KLLQNITIGTVLQIKAYRG 110 (126)
T ss_dssp TEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHH----------HHHTSCCSSCEEEEEEESS
T ss_pred CcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHH----------HHHhcCCCCCEEEEEEEEC
Confidence 5789999999999999 9 9999999999999995 556653 6666666899999999998
No 224
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=98.55 E-value=1e-07 Score=79.12 Aligned_cols=61 Identities=13% Similarity=0.259 Sum_probs=48.7
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCE
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~ 422 (526)
..|++|.+|.++|||++ | |++||+|++|||+++.++.... +..++. ..|+++.|+|.|++.
T Consensus 32 ~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~--------~~~~l~--~~g~~v~l~v~R~~~ 94 (96)
T 1d5g_A 32 HGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQ--------AVETLR--NTGQVVHLLLEKGQS 94 (96)
T ss_dssp SSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHH--------HHHHHH--SCCSEEEEEEECCSC
T ss_pred cCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCeEEEEEEcCCC
Confidence 46899999999999998 9 9999999999999999653211 113333 268999999999874
No 225
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=98.55 E-value=4.5e-08 Score=82.06 Aligned_cols=57 Identities=18% Similarity=0.250 Sum_probs=47.5
Q ss_pred cceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecC--CCCcccccccchhhhhhhhhcCCCCEEEEEEEECC
Q 009784 353 KGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDS 421 (526)
Q Consensus 353 ~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~--~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G 421 (526)
.|++|.+|.++|||++ | |++||+|++|||++|.+ +.++. .++.. .+++++|+|.+..
T Consensus 36 ~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~----------~~l~~--~~~~v~L~V~~~~ 96 (97)
T 2ejy_A 36 QSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQ----------KAMKE--TKGMISLKVIPNQ 96 (97)
T ss_dssp CCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHH----------HHHHH--CCEEEEEEEECCC
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHH----------HHHHc--CCCeEEEEEEECC
Confidence 6899999999999999 9 99999999999999986 56643 55554 3678999988753
No 226
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.55 E-value=2e-08 Score=84.88 Aligned_cols=61 Identities=21% Similarity=0.241 Sum_probs=49.6
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCC--CCcccccccchhhhhhhhhcCCCCEEEEEEEECCE
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~--~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~ 422 (526)
..+++|.+|.++|||++ | |++||+|++|||++|.+. .++ ..++....+|++|+|+|.|+++
T Consensus 33 ~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~----------~~~l~~~~~g~~v~l~v~R~~~ 97 (103)
T 1uep_A 33 GQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYV----------IDLMHHAARNGQVNLTVRRKVL 97 (103)
T ss_dssp TSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHH----------HHHHHHHHHHTEEEEEEEEECC
T ss_pred CCCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHH----------HHHHHhCCCCCcEEEEEEeCCC
Confidence 46899999999999999 9 999999999999999764 332 2444444348899999999875
No 227
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=98.54 E-value=7.2e-08 Score=80.27 Aligned_cols=57 Identities=19% Similarity=0.341 Sum_probs=47.5
Q ss_pred ccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCC--CCcccccccchhhhhhhhhcCCCCEEEEEEEEC
Q 009784 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRD 420 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~--~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~ 420 (526)
..|++|.+|.++|||++ ||++||+|++|||+++.+. .++. .++... ++++.|+|+|+
T Consensus 36 ~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~----------~~l~~~--~~~v~l~v~~~ 95 (96)
T 2ego_A 36 EMVTFVARVHESSPAQLAGLTPGDTIASVNGLNVEGIRHREIV----------DIIKAS--GNVLRLETLYG 95 (96)
T ss_dssp CEEEEEEEECTTCHHHHTTCCTTCEEEEETTEECTTCCHHHHH----------HHHHHT--TTEEEEEEECC
T ss_pred CCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HHHHhC--CCeEEEEEEEC
Confidence 46899999999999999 9999999999999999985 4432 445443 56999999875
No 228
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=98.54 E-value=4.5e-08 Score=80.52 Aligned_cols=62 Identities=16% Similarity=0.244 Sum_probs=44.8
Q ss_pred ccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCE
Q 009784 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~ 422 (526)
..|++|..|.++|||++ ||++||+|++|||+++.+..... +..++.. ..++.+.+.+.|+++
T Consensus 26 ~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~--------~~~~l~~-~~~~~~~~~~~r~~~ 88 (91)
T 1g9o_A 26 KLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQ--------VVSRIRA-ALNAVRLLVVDPETD 88 (91)
T ss_dssp CSSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHH--------HHHHHHT-CSSEEEEEEECCCCS
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc-CCCcEEEEEEcCCcc
Confidence 36899999999999999 99999999999999998754321 1133333 345555555555554
No 229
>3mmg_A Nuclear inclusion protein A; 3C-type protease, TEV, TVMV, viral protein, hydrolase; 1.70A {Tobacco vein mottling virus} SCOP: b.47.1.0
Probab=98.53 E-value=4.4e-06 Score=80.18 Aligned_cols=172 Identities=18% Similarity=0.240 Sum_probs=107.9
Q ss_pred hcccCCCeEEEEeeeeCCCCCCccccCCCcceEEEEEEEe-CCEEEecccccCCC-CeEEEEEcCCCcEEEEE----EEE
Q 009784 118 VVPAMDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFAIG-GRRVLTNAHSVEHY-TQVKLKKRGSDTKYLAT----VLA 191 (526)
Q Consensus 118 ~~~~~~SVV~I~~~~~~~~~~~P~~~~~~~~~~GSGfvI~-~g~ILT~aHvV~~~-~~i~V~~~~~g~~~~a~----vv~ 191 (526)
-.+....|+++..... ....+-+-|. ..||+||+|.+... ..++|+.. .|...-.. -+.
T Consensus 11 yn~ia~~iC~l~n~sd--------------g~~~~l~gigyG~~iItn~HLf~rnng~L~I~s~-hG~f~v~nt~~lki~ 75 (241)
T 3mmg_A 11 FNPISACVCLLENSSD--------------GHSERLFGIGFGPYIIANQHLFRRNNGELTIKTM-HGEFAVANSTQLQMK 75 (241)
T ss_dssp CHHHHTTEEEEEEEET--------------TEEEEEEEEEETTEEEECGGGGSSTTCEEEEEET-TEEEEEEEGGGSCEE
T ss_pred CChhhheEEEEEEEeC--------------CCEEEEEEEeECCEEEEChhhcccCCCeEEEEEC-CceEEccCCCceeeE
Confidence 3445558888877551 1234445555 77999999999855 46888875 44332111 255
Q ss_pred eccCCCeEEEEecccccccCceeeecC---CCCcCCCcEEEEeeCCCCCceeEEEEEEeceeeeeccCCceeeeEEEEcc
Q 009784 192 IGTECDIAMLTVEDDEFWEGVLPVEFG---ELPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDA 268 (526)
Q Consensus 192 ~d~~~DlAlLkv~~~~~~~~~~pl~l~---~~~~~g~~V~~iG~p~~~~~~sv~~GiVs~~~~~~~~~~~~~~~~i~~da 268 (526)
.-+..||.++|++.+ ++|.+-. ..+..+++|..+|..+.....+ ..||.........+ . .+...-.
T Consensus 76 ~i~g~DiiiIrmPkD-----fpPf~~kl~FR~P~~~E~V~lVg~~fq~k~~~---s~vSesS~i~p~~~-~--~fWkHwI 144 (241)
T 3mmg_A 76 PVEGRDIIVIKMAKD-----FPPFPQKLKFRQPTIKDRVCMVSTNFQQKSVS---SLVSESSHIVHKED-T--SFWQHWI 144 (241)
T ss_dssp ECTBSSCEEEECCTT-----SCCCCSCCCBCCCCTTCCEEEEEEEECSSCEE---EEEEEEECCEECTT-S--SEEEECB
T ss_pred EeCCccEEEEeCCCC-----CCCcchhcccCCCCCCCeEEEEEeecccCCcc---EEECCcceeEEcCC-C--CEEEEEc
Confidence 567899999999754 3444322 4667899999999876644321 22333222111122 1 2455666
Q ss_pred cCCCCCCCCeeecC-CCeEEEEEeeccccCcccccccccc--HHHHHHHHHHH
Q 009784 269 AINSGNSGGPAFND-KGKCVGIAFQSLKHEDVENIGYVIP--TPVIMHFIQDY 318 (526)
Q Consensus 269 ~i~~G~SGGPlvn~-~G~VVGI~~~~~~~~~~~~~~~aIP--~~~i~~~l~~l 318 (526)
.+..|+-|+|+++. +|.+|||++.... ....+|+.| -+...++|+..
T Consensus 145 sT~~G~CGlPlVs~~Dg~IVGiHsl~~~---~~~~N~F~~f~~~f~~~~L~~~ 194 (241)
T 3mmg_A 145 TTKDGQAGSPLVSIIDGNILGIHSLTHT---TNGSNYFVEFPEKFVATYLDAA 194 (241)
T ss_dssp CCCTTCTTCEEEETTTCCEEEEEEEEET---TTCCEEEEECCTTHHHHHTTCS
T ss_pred CCCCCcCCCeEEEcCCCcEEEEEecccC---CCCcEEEEcCCHHHHHHHhhCc
Confidence 77799999999987 9999999988652 234566544 45555555544
No 230
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.53 E-value=2.8e-08 Score=86.69 Aligned_cols=61 Identities=13% Similarity=0.182 Sum_probs=52.3
Q ss_pred cceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecC--CCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEE
Q 009784 353 KGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (526)
Q Consensus 353 ~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~--~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~ 423 (526)
.+++|.+|.+++||++ | |++||+|++|||++|.+ +.++. .++....+|++++|+|.|+++.
T Consensus 45 ~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~----------~~l~~~~~g~~v~l~v~R~~~~ 109 (122)
T 1v5q_A 45 SPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEAN----------QLLRDSSITSKVTLEIEFDVAE 109 (122)
T ss_dssp SCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHH----------HHHHHHTTTTCEEEEEEEECCC
T ss_pred CCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHH----------HHHHhCCCCCeEEEEEEECCcc
Confidence 4689999999999999 9 99999999999999987 55543 6666665699999999998864
No 231
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=98.53 E-value=2.4e-08 Score=87.68 Aligned_cols=69 Identities=22% Similarity=0.361 Sum_probs=56.2
Q ss_pred ccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecC--CCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEEEE--E
Q 009784 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILN--F 426 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~--~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~~~--~ 426 (526)
..|++|..|.++|||++ ||++||+|++|||+++.+ +.++. .++... .|+.+.++|.|+|+..+ +
T Consensus 32 ~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~----------~~l~~~-~~~~~~l~v~R~g~~~~~~~ 100 (128)
T 2kjd_A 32 KPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVV----------SAIRAG-GDETKLLVVDRETDEFFKKC 100 (128)
T ss_dssp SCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHH----------HHHHTT-CSEEEEEEECHHHHHHHHHH
T ss_pred CCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HHHHhC-CCCEEEEEEEeCCcceEEEE
Confidence 35899999999999999 999999999999999988 55542 555544 78889999999998766 4
Q ss_pred EEEec
Q 009784 427 NITLA 431 (526)
Q Consensus 427 ~v~l~ 431 (526)
++++.
T Consensus 101 ~l~~~ 105 (128)
T 2kjd_A 101 RVIPS 105 (128)
T ss_dssp TCCCC
T ss_pred EEEec
Confidence 44443
No 232
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.52 E-value=1.5e-07 Score=78.48 Aligned_cols=59 Identities=17% Similarity=0.231 Sum_probs=47.3
Q ss_pred cceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCC--CCcccccccchhhhhhhhhcCCCCEEEEEEEECCEE
Q 009784 353 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (526)
Q Consensus 353 ~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~--~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~ 423 (526)
.|++|.+|.+. |++ ||++||+|++|||+++.+. .++. .++....+|+++.|+|.|+|+.
T Consensus 32 ~Gv~V~~v~~~--a~~aGL~~GD~I~~vng~~v~~~~~~~~~----------~~l~~~~~g~~v~l~v~R~g~~ 93 (96)
T 1ujv_A 32 TGQRVKQILDI--QGCPGLCEGDLIVEINQQNVQNLSHTEVV----------DILKDCPIGSETSLIIHRGSGP 93 (96)
T ss_dssp TEEEEEEESCG--GGSTTCCSSCEEEEETTEECSSCCHHHHH----------HHHHHSCTTSEEEEEEECCSSC
T ss_pred CCEEEEEEecc--cccCCCCCCCEEEEECCEECCCCCHHHHH----------HHHHcCCCCCEEEEEEEECCCC
Confidence 48999999983 556 9999999999999999876 3432 5555554699999999998863
No 233
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.51 E-value=9e-08 Score=81.41 Aligned_cols=62 Identities=13% Similarity=0.252 Sum_probs=49.9
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEE
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~ 423 (526)
..|++|.+|.++|||++ | |++||+|++|||+++.+..... +...+.. .|+++.|+|.|+++.
T Consensus 41 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~--------~~~~~~~--~g~~v~l~v~R~~~~ 104 (108)
T 1q7x_A 41 HGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQ--------AVETLRN--TGQVVHLLLEKGQSP 104 (108)
T ss_dssp SCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSH--------HHHHHHH--TTSEEEEEEECCCCS
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCeEEEEEEeCCcc
Confidence 46899999999999999 9 9999999999999998543321 1133333 589999999998864
No 234
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.51 E-value=3.7e-08 Score=86.62 Aligned_cols=80 Identities=16% Similarity=0.311 Sum_probs=59.6
Q ss_pred cccCceeeeccChhHHhhhcCCCCccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecC--CCCcccccccchhhhhh
Q 009784 328 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYL 403 (526)
Q Consensus 328 ~~LGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~--~~~l~~~~~~~~~~~~~ 403 (526)
..||+.+........ + ....|++|..|.++|||++ | |++||+|++|||+++.+ ..++. .+
T Consensus 27 ~~lG~~i~~~~~~~~---~---~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~----------~~ 90 (129)
T 2dmz_A 27 QSLGIRIVGYVGTSH---T---GEASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVV----------EV 90 (129)
T ss_dssp CCCCEEEEEECCCSS---S---CCCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHH----------HH
T ss_pred CCcCEEEEeecCCcc---c---CCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHH----------HH
Confidence 346777765421110 1 1347899999999999999 9 99999999999999988 44432 44
Q ss_pred hhhcCCCCEEEEEEEECCEEEE
Q 009784 404 VSQKYTGDSAAVKVLRDSKILN 425 (526)
Q Consensus 404 l~~~~~G~~v~l~v~R~G~~~~ 425 (526)
+.. .|+.+.|+|.|+|+..+
T Consensus 91 l~~--~~~~v~l~v~R~~~~~~ 110 (129)
T 2dmz_A 91 LRN--AGQVVHLTLVRRKTSSS 110 (129)
T ss_dssp HHH--CCSSEEEEEEEESSSSS
T ss_pred HHc--CCCeEEEEEEeCCcccc
Confidence 544 78999999999987543
No 235
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=98.51 E-value=5.6e-08 Score=84.23 Aligned_cols=62 Identities=18% Similarity=0.226 Sum_probs=48.4
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEE
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~ 423 (526)
..|++|.+|.++|||++ | |++||+|++|||+++.+..... +...+.. .+++++|+|.|+|+.
T Consensus 52 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~--------~~~~l~~--~~~~v~l~v~R~g~~ 115 (117)
T 2fne_A 52 DLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEE--------AVAILKR--TKGTVTLMVLSSDET 115 (117)
T ss_dssp EEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHH--------HHHHHHH--CCSSEEEEEEECSCE
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCeEEEEEEeCCcc
Confidence 36899999999999999 8 9999999999999998543211 1133333 456799999999875
No 236
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.51 E-value=5e-08 Score=80.59 Aligned_cols=68 Identities=21% Similarity=0.278 Sum_probs=54.5
Q ss_pred cccCceeeeccChhHHhhhcCCCCccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEe-cCCCCcccccccchhhhhhh
Q 009784 328 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDI-ANDGTVPFRHGERIGFSYLV 404 (526)
Q Consensus 328 ~~LGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I-~~~~~l~~~~~~~~~~~~~l 404 (526)
.+||+.+... ..|++|.+|.++|||++ | |++||+|++|||+++ .++.++. .++
T Consensus 18 ~~lG~~i~~~--------------~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v~~~~~~~~----------~~l 73 (91)
T 2e7k_A 18 EHLGVTFRVE--------------GGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPVGSDPRALQ----------ELL 73 (91)
T ss_dssp CCCCEEEEES--------------SSSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCHHHHH----------HHH
T ss_pred CcEeEEEEec--------------CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCHHHHH----------HHH
Confidence 4678877652 36899999999999998 7 999999999999999 6666643 455
Q ss_pred hhcCCCCEEEEEEEECC
Q 009784 405 SQKYTGDSAAVKVLRDS 421 (526)
Q Consensus 405 ~~~~~G~~v~l~v~R~G 421 (526)
.. .++++.|+|.|..
T Consensus 74 ~~--~~~~v~l~v~~~~ 88 (91)
T 2e7k_A 74 RN--ASGSVILKILSGP 88 (91)
T ss_dssp HT--CCSSBCEEEECCS
T ss_pred Hc--CCCeEEEEEEECC
Confidence 44 4778999998853
No 237
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.49 E-value=5.5e-08 Score=83.61 Aligned_cols=60 Identities=22% Similarity=0.264 Sum_probs=49.1
Q ss_pred ccceEEEEeCCCCcccC-CC-CCCcEEEEECCEEecCCC--CcccccccchhhhhhhhhcCCCCEEEEEEEECCEE
Q 009784 352 QKGVRIRRVDPTAPESE-VL-KPSDIILSFDGIDIANDG--TVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-GL-~~GDvIl~vnG~~I~~~~--~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~ 423 (526)
..|++|.+|.+++||++ || ++||+|++|||++|.+.. ++. .++.. .++++.|+|+|+++.
T Consensus 47 ~~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~~~~~----------~~l~~--~~~~v~l~v~r~~~~ 110 (113)
T 1va8_A 47 MDSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVF----------DLLSD--MHGTLTFVLIPSSGP 110 (113)
T ss_dssp SSSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHH----------HHHHH--CCEEEEEEEECCCCC
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHH----------HHHHc--CCCeEEEEEEECCcc
Confidence 36899999999999999 99 999999999999998543 432 44433 356899999999874
No 238
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.49 E-value=7.6e-08 Score=81.23 Aligned_cols=62 Identities=13% Similarity=0.141 Sum_probs=49.7
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEE
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~ 423 (526)
..+++|.+|.+++||++ | |++||+|++|||++|.++.... +...+.. .|+++.|+|.|+|+.
T Consensus 37 ~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~--------~~~~~~~--~g~~v~l~v~R~g~~ 100 (104)
T 2djt_A 37 DTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQ--------AVERIRA--GGPQLHLVIRRPLSG 100 (104)
T ss_dssp ECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHH--------HHHHHHH--TCSEEEEEECCCCCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCeEEEEEEECCCC
Confidence 46899999999999999 9 9999999999999998864211 1123333 689999999998864
No 239
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=98.49 E-value=8.3e-08 Score=78.73 Aligned_cols=58 Identities=17% Similarity=0.247 Sum_probs=48.1
Q ss_pred cceEEEEeCCCCcccC--CCCCCcEEEEECCEEec--CCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCE
Q 009784 353 KGVRIRRVDPTAPESE--VLKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (526)
Q Consensus 353 ~Gv~V~~V~~~spA~~--GL~~GDvIl~vnG~~I~--~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~ 422 (526)
.+++|.+|.++|||++ ||++||+|++|||+++. ++.++. .++... .+ +++|+|.|.++
T Consensus 25 ~~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~~~----------~~l~~~-~~-~v~l~v~r~~~ 86 (88)
T 1kwa_A 25 NHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQ----------KMLREM-RG-SITFKIVPSYR 86 (88)
T ss_dssp GGEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHHH----------HHHHHC-CE-EEEEEEECCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHH----------HHHhcC-CC-cEEEEEECCcC
Confidence 5799999999999997 69999999999999998 555543 555443 45 99999999875
No 240
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=98.49 E-value=8.6e-08 Score=84.76 Aligned_cols=61 Identities=16% Similarity=0.218 Sum_probs=51.3
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCC--CCcccccccchhhhhhhhhcCCCCEEEEEEEECCE
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~--~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~ 422 (526)
..|++|.+|.+++||++ | |++||+|++|||+++.+. .++ ..++....+|+.|+|+|.|+|.
T Consensus 64 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~----------~~~l~~~~~g~~v~l~v~R~g~ 128 (131)
T 1wfg_A 64 RLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEV----------YNIILESKPEPQVELVVSRSGP 128 (131)
T ss_dssp CEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHH----------HHHHHHTSSSSEEEEEEEEECS
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHH----------HHHHHhcCCCCEEEEEEEcCCC
Confidence 45899999999999999 9 999999999999999865 333 2556665578999999999764
No 241
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.48 E-value=4.4e-08 Score=82.41 Aligned_cols=62 Identities=13% Similarity=0.181 Sum_probs=49.6
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEE
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~ 423 (526)
..|++|.+|.++|||++ | |++||+|++|||+++.+..... +...+. ..|+++.|+|.|+|+.
T Consensus 35 ~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~--------~~~~~~--~~g~~v~l~v~R~~~~ 98 (103)
T 1wfv_A 35 KMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHAR--------AIELIK--SGGRRVRLLLKRGTGS 98 (103)
T ss_dssp TEEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHH--------HHHHHH--HHCSEECEEEECTTCS
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCeEEEEEEECCCC
Confidence 35899999999999999 9 9999999999999998864221 112332 3689999999998864
No 242
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=98.47 E-value=8.9e-08 Score=82.00 Aligned_cols=60 Identities=22% Similarity=0.209 Sum_probs=46.6
Q ss_pred cceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCC--CCcccccccchhhhhhhhhcCCCCEEEEEEEECCEE
Q 009784 353 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (526)
Q Consensus 353 ~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~--~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~ 423 (526)
.+++|.+|.++|||++ ||++||+|++|||++|.++ .++. .++.. ..+++++|+|.|....
T Consensus 44 ~~v~V~~V~~gspA~~AGL~~GD~Il~VnG~~v~~~~~~dv~----------~~i~~-~~~~~v~l~V~~~~~~ 106 (109)
T 2vsv_A 44 APVQVHFLDPYCSASVAGAREGDYIVSIQLVDCKWLTLSEVM----------KLLKS-FGEDEIEMKVVSLLDE 106 (109)
T ss_dssp SSCEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHH----------HHHHT-TTTSCEEEEEESCC--
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HHHHh-CCCCeEEEEEEECCCc
Confidence 4688999999999999 9999999999999999965 4542 44433 3455699999986543
No 243
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=98.47 E-value=2.7e-08 Score=86.65 Aligned_cols=64 Identities=16% Similarity=0.202 Sum_probs=50.1
Q ss_pred ccceEEEEeCCCCcccC--CCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEEEE
Q 009784 352 QKGVRIRRVDPTAPESE--VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILN 425 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~--GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~~~ 425 (526)
..|++|.+|.++|||++ ||++||+|++|||+++.+..... ...++. ..+++++|+|.|+|+..+
T Consensus 52 ~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~--------~~~~l~--~~~~~v~l~v~r~g~~~~ 117 (120)
T 2iwo_A 52 DVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQ--------AVNLLK--NASGSIEMQVVAGGDVSE 117 (120)
T ss_dssp EEEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHH--------HHHHHH--HCCSEEEEEEECCTTSSS
T ss_pred CCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCeEEEEEEECCccce
Confidence 35899999999999985 99999999999999998764321 112232 247889999999987644
No 244
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=98.46 E-value=6.6e-08 Score=78.13 Aligned_cols=57 Identities=16% Similarity=0.181 Sum_probs=46.6
Q ss_pred cceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCCC--CcccccccchhhhhhhhhcCCCCEEEEEEEECC
Q 009784 353 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDG--TVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDS 421 (526)
Q Consensus 353 ~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~~--~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G 421 (526)
.|++|.+|.++|||++ ||++||+|++|||+++.++. ++. ..+. ..+++++|+|.|+.
T Consensus 23 ~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~----------~~l~--~~~~~v~l~v~R~~ 82 (83)
T 2kv8_A 23 APCVLSCVMRGSPADFVGLRAGDQILAVNEINVKKASHEDVV----------KLIG--KCSGVLHMVIAEGV 82 (83)
T ss_dssp SSCBCCBCCTTSTTTTTTCCTTCEEEEETTEECSSCCHHHHH----------HHHT--TCSSCEEEEEECCC
T ss_pred CCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HHHH--hCCCeEEEEEEcCC
Confidence 4789999999999999 99999999999999999883 331 3332 24678999999963
No 245
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=98.46 E-value=1.4e-07 Score=81.61 Aligned_cols=61 Identities=10% Similarity=0.137 Sum_probs=48.7
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCE
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~ 422 (526)
..|++|.+|.++|||++ | |++||+|++|||+.+.+..... +...+. ..|++|+|+|.|+|+
T Consensus 53 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~--------~~~~l~--~~g~~v~l~v~R~~~ 115 (117)
T 2byg_A 53 DNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEE--------AVAILK--NTSEVVYLKVGKPTT 115 (117)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHH--------HHHHHH--TCCSEEEEEEEEEEE
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCeEEEEEEeCCc
Confidence 46899999999999999 9 9999999999999998543211 113333 358999999999875
No 246
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.46 E-value=8.7e-08 Score=81.42 Aligned_cols=61 Identities=15% Similarity=0.219 Sum_probs=49.4
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCE
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~ 422 (526)
..|++|.+|.++|||++ | |++||+|++|||+++.+..... ...++.. .|+++.|+|.|++.
T Consensus 39 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~--------~~~~~~~--~~~~v~l~v~R~~~ 101 (107)
T 1wf8_A 39 KLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNF--------AATVLRN--TKGNVRFVIGREKP 101 (107)
T ss_dssp EEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHH--------HHHHHHH--CCSEEEEEEEEECC
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHhc--CCCeEEEEEEeCCC
Confidence 57999999999999999 9 9999999999999998765432 1123322 58999999999764
No 247
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=98.45 E-value=1.2e-07 Score=79.89 Aligned_cols=61 Identities=25% Similarity=0.442 Sum_probs=48.9
Q ss_pred CccceEEEEeCCCCcccCCCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECC
Q 009784 351 DQKGVRIRRVDPTAPESEVLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDS 421 (526)
Q Consensus 351 ~~~Gv~V~~V~~~spA~~GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G 421 (526)
...|++|.+|.++|||++||++||+|++|||+++.+..... ....+. ..|+++.|+|.|+.
T Consensus 41 ~~~gv~V~~V~~~spA~~gL~~GD~I~~vng~~v~~~~~~~--------~~~~~~--~~g~~v~l~v~R~~ 101 (103)
T 1n7t_A 41 DDDGIFVTRVQPEGPASKLLQPGDKIIQANGYSFINIEHGQ--------AVSLLK--TFQNTVELIIVREV 101 (103)
T ss_dssp SCCSEECCCBSSSSTTSSSCCTTCEEEEETTEECSSCCHHH--------HHHHHH--HCCSEEEEEEECCC
T ss_pred CCCCEEEEEECCCCchHHCCCCCCEEEEECCEECCCCCHHH--------HHHHhh--cCCCeEEEEEEecC
Confidence 35789999999999999999999999999999998865432 112222 46899999999974
No 248
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.45 E-value=1.7e-07 Score=80.05 Aligned_cols=61 Identities=23% Similarity=0.345 Sum_probs=49.0
Q ss_pred cceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEE
Q 009784 353 KGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (526)
Q Consensus 353 ~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~ 423 (526)
.|++|.+|.+++||++ | |++||+|++|||+++.++.... +..++.. .|+.+.|+|.|+++.
T Consensus 38 ~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~--------~~~~l~~--~g~~v~l~v~R~~~~ 100 (111)
T 2dlu_A 38 SGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQ--------VAQVLRN--CGNSVRMLVARDPAG 100 (111)
T ss_dssp SSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHH--------HHHHHHH--HCSEEEEEEEESCTT
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHh--CCCeEEEEEEeCCCC
Confidence 6899999999999999 9 9999999999999998653211 1234433 488999999998764
No 249
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.43 E-value=1.1e-07 Score=82.13 Aligned_cols=62 Identities=18% Similarity=0.264 Sum_probs=49.6
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEE
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~ 423 (526)
..|++|.+|.++|||++ | |++||+|++|||+++.+..... +..++. ..++++.|+|.|+++.
T Consensus 48 ~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~--------~~~~l~--~~~~~v~l~v~R~~~~ 111 (117)
T 1ujd_A 48 EIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEE--------VQSIIS--QQSGEAEICVRLDLNM 111 (117)
T ss_dssp CEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHH--------HHHHHS--CCSSCEEEEEESSCCC
T ss_pred CcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHH--------HHHHHh--cCCCEEEEEEEECCcc
Confidence 35899999999999999 9 9999999999999998754321 113332 3688999999998864
No 250
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=98.42 E-value=2.2e-07 Score=81.85 Aligned_cols=61 Identities=15% Similarity=0.213 Sum_probs=51.1
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCC--CcccccccchhhhhhhhhcCCCCEEEEEEEECCE
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDG--TVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~--~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~ 422 (526)
..|++|.+|.++|||++ | |++||+|++|||++|.+.. ++ ..++.....|++|+|+|.|++.
T Consensus 42 ~~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~----------~~~l~~~~~g~~v~l~v~R~~~ 106 (129)
T 2kpk_A 42 DEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQV----------VKIFQSIPIGASVDLELCRGYP 106 (129)
T ss_dssp TEEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHH----------HHHHHHSCTTEEEEEEEEECSC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHH----------HHHHHhCCCCCeEEEEEEeCCC
Confidence 35799999999999999 9 9999999999999998653 33 2556665569999999999873
No 251
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.42 E-value=1.2e-07 Score=82.25 Aligned_cols=62 Identities=21% Similarity=0.299 Sum_probs=50.0
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEE
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~ 423 (526)
..|++|.+|.+++||++ | |++||+|++|||++|.+..... +...+.. .|+.+.|+|.|+++.
T Consensus 46 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~--------~~~~~~~--~g~~v~l~v~R~~~~ 109 (120)
T 2eno_A 46 DSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQD--------AVDLFRN--AGYAVSLRVQHRLQV 109 (120)
T ss_dssp CCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHH--------HHHHHHH--HCSEEEEEEEEEEEC
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCeEEEEEEeCCcC
Confidence 56899999999999998 9 9999999999999999876221 1133333 488999999998764
No 252
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=98.42 E-value=1.1e-07 Score=81.14 Aligned_cols=62 Identities=11% Similarity=0.209 Sum_probs=48.8
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCC--CCcccccccchhhhhhhhhc-CCCCEEEEEEEECCEE
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQK-YTGDSAAVKVLRDSKI 423 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~--~~l~~~~~~~~~~~~~l~~~-~~G~~v~l~v~R~G~~ 423 (526)
..|++|.+|.++|||++ | |++||+|++|||+++.+. .++ ..++... +.++.|+|+|.|.++.
T Consensus 32 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~----------~~~l~~~~~~~~~v~l~v~R~~~~ 98 (108)
T 3cbz_A 32 DGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDA----------VRVLRDIVHKPGPIVLTVAKSGGG 98 (108)
T ss_dssp CCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHH----------HHHHHHHHTSSSCEEEEEECCCC-
T ss_pred CCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHH----------HHHHHhcccCCCeEEEEEEeCCCC
Confidence 47899999999999999 9 999999999999999884 333 2445443 1244699999998754
No 253
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.42 E-value=8.9e-08 Score=81.09 Aligned_cols=62 Identities=13% Similarity=0.245 Sum_probs=48.6
Q ss_pred ccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEE
Q 009784 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~ 423 (526)
..|++|.+|.++|||++ ||++||+|++|||+++.+..... +...+.. .|+++.|+|.|++..
T Consensus 31 ~~g~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~--------~~~~~~~--~~~~v~l~v~r~~~~ 93 (106)
T 2eei_A 31 KKGVYMTDITPQGVAMRAGVLADDHLIEVNGENVEDASHEE--------VVEKVKK--SGSRVMFLLVDKETD 93 (106)
T ss_dssp CCSCEECCCCTTSHHHHHTCCSSEEEEEETTEECTTCCHHH--------HHHHHHH--HCSEEEEEECCTTTS
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHHh--CCCeEEEEEEcCchh
Confidence 46899999999999999 99999999999999998654321 1122322 478999999997754
No 254
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=98.42 E-value=3.3e-07 Score=75.12 Aligned_cols=59 Identities=20% Similarity=0.196 Sum_probs=46.3
Q ss_pred ccceEEEEeCCCCcccC--CCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEEC
Q 009784 352 QKGVRIRRVDPTAPESE--VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRD 420 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~--GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~ 420 (526)
..|++|.+|.++|||++ ||++||+|++|||+++.+..... ....+ ...|++++|+|.|-
T Consensus 29 ~~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~--------~~~~~--~~~~~~v~l~v~r~ 89 (90)
T 1qav_A 29 KMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDE--------AVQAL--KKTGKEVVLEVKYM 89 (90)
T ss_dssp TEEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHH--------HHHHH--HTCCSEEEEEEEEC
T ss_pred CCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHH--------HHHHH--HhCCCeEEEEEEEe
Confidence 36899999999999986 89999999999999998764321 11222 23588999999883
No 255
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.41 E-value=9.2e-08 Score=80.97 Aligned_cols=61 Identities=18% Similarity=0.314 Sum_probs=48.2
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCE
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~ 422 (526)
..|++|.+|.++|||++ | |++||+|++|||+++.+..... +..++.. .|+.+.|+|.|++.
T Consensus 37 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~--------~~~~l~~--~g~~v~l~v~R~~~ 99 (105)
T 1wha_A 37 DAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDH--------AVSLLTA--ASPTIALLLEREAG 99 (105)
T ss_dssp CCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHH--------HHHHHTS--CCSCEEEEEEECCC
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCeEEEEEEECCC
Confidence 46899999999999999 9 9999999999999998743211 1133322 48899999999764
No 256
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.41 E-value=7.5e-08 Score=80.28 Aligned_cols=59 Identities=17% Similarity=0.167 Sum_probs=47.1
Q ss_pred cceEEEEeCCCCcccCCCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECC
Q 009784 353 KGVRIRRVDPTAPESEVLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDS 421 (526)
Q Consensus 353 ~Gv~V~~V~~~spA~~GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G 421 (526)
.+++|.+|.++|||+.||++||+|++|||++|.+..... +...+.. .|+++.|+|+|++
T Consensus 31 ~~~~V~~V~~~spA~agL~~GD~Il~ing~~v~~~~~~~--------~~~~~~~--~g~~v~l~v~R~~ 89 (96)
T 2edv_A 31 LPLTVVAVTAGGSAHGKLFPGDQILQMNNEPAEDLSWER--------AVDILRE--AEDSLSITVVRCT 89 (96)
T ss_dssp SSCBCCCBCSSSSSTTTSCTTCBEEEESSCBSTTCCHHH--------HHHHHHH--CSSCEEEEEEECC
T ss_pred CCeEEEEECCCCchhhCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCeEEEEEEECC
Confidence 578999999999996699999999999999998764321 1122222 6999999999986
No 257
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=98.41 E-value=1.4e-07 Score=82.82 Aligned_cols=59 Identities=22% Similarity=0.293 Sum_probs=48.0
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEec---CCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCE
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIA---NDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~---~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~ 422 (526)
..|++|.+|.+++||++ | |++||+|++|||++|. +..++. .++.. .|+.|.|+|.|++.
T Consensus 53 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~----------~~l~~--~~~~v~l~v~r~~~ 116 (128)
T 2db5_A 53 KVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAI----------ALLQQ--TTGSLRLIVAREPV 116 (128)
T ss_dssp CEEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHH----------HHHHH--CCSEEEEEEEECCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHH----------HHHHc--CCCeEEEEEEcCCC
Confidence 45899999999999999 9 9999999999999997 333321 33433 68999999999854
No 258
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.41 E-value=1.8e-07 Score=77.13 Aligned_cols=61 Identities=21% Similarity=0.263 Sum_probs=47.3
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCE
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~ 422 (526)
..|++|.+|.++|||++ | |++||+|++|||+++.+..... +...+.. .++++.|+|.|+++
T Consensus 29 ~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~--------~~~~~~~--~~~~v~l~v~r~~~ 91 (93)
T 2dkr_A 29 NSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEK--------AVELLKA--AQGSVKLVVRSGPS 91 (93)
T ss_dssp SCCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHH--------HHHHHHH--CCSEEEEEECCCCS
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHh--CCCcEEEEEEeCCC
Confidence 46899999999999998 7 9999999999999998753211 1133332 46789999999763
No 259
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=98.40 E-value=8e-08 Score=100.44 Aligned_cols=113 Identities=13% Similarity=0.119 Sum_probs=52.5
Q ss_pred cceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEEEEEEEEe
Q 009784 353 KGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITL 430 (526)
Q Consensus 353 ~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~~~~~v~l 430 (526)
.|++|.+|.++|||++ | |++||+|++|||+++.++.... +..++.....+.+++|+|.|+++..++++..
T Consensus 232 ~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~--------~~~~l~~~~~~~~v~l~v~r~~~~~~v~l~~ 303 (388)
T 3suz_A 232 PTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLAT--------CQGIIKGLKNQTQVKLNIVSCPPVTTVLIKR 303 (388)
T ss_dssp CCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTT--------HHHHTTTCTTCSCEEEEEEECCSCC------
T ss_pred CCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHH--------HHHHHHhccCCCccccccccccccceeeEee
Confidence 4689999999999999 8 9999999999999999884321 1245555556788999999998876655532
Q ss_pred cccccccCCCCCCCCCceEEEeeEEEEeccccceeeeeeeecc--hhhhccccccceeeeecccchh
Q 009784 431 ATHRRLIPSHNKGRPPSYYIIAGFVFSRCLYLISVLSMERIMN--MKLRSSFWTSSCIQCHNCQMSS 495 (526)
Q Consensus 431 ~~~~~~~p~~~~~~~p~~~i~gG~~f~~lt~~~~~~~~~~i~~--~~~~sg~~~~~~~~~~~~~~~~ 495 (526)
..... --|+.+.. + .+..+.+ .+.++||+.||.|...|.+-..
T Consensus 304 ~~~~~---------------~lG~~i~~-----g--~I~~V~~gs~A~~aGL~~GD~Il~VNg~~v~ 348 (388)
T 3suz_A 304 PDLKY---------------QLGFSVQN-----G--IICSLMRGGIAERGGVRVGHRIIEINGQSVV 348 (388)
T ss_dssp -------------------------------------------------------------------
T ss_pred cCCCC---------------ccceEEec-----C--EEEEeecCCHHHHcCCCCCCEEEEECCEECC
Confidence 11100 01222111 1 2333333 4568999999999999997654
No 260
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.40 E-value=9.2e-08 Score=78.96 Aligned_cols=64 Identities=13% Similarity=0.196 Sum_probs=48.5
Q ss_pred HhhhcCCCCccceEEEEeCCCCcccC-CCCCCcEEEEECCEEec--CCCCcccccccchhhhhhhhhcCCCCEEEEEEEE
Q 009784 343 RVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLR 419 (526)
Q Consensus 343 ~~~lgl~~~~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~--~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R 419 (526)
...+|+.. ..| +|.+|.++|||++ ||++||+|++|||++|. ++.++. .++.. .|+++.|+|++
T Consensus 23 ~~~lG~~~-~~G-~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~----------~~l~~--~g~~v~l~v~p 88 (90)
T 1y7n_A 23 RYQLGFSV-QNG-IICSLMRGGIAERGGVRVGHRIIEINGQSVVATPHEKIV----------HILSN--AVGEIHMKTMP 88 (90)
T ss_dssp TSCCCEEE-ETT-EEEEECTTSHHHHHTCCSSCEEEEETTEECTTSCHHHHH----------HHHHH--CCEEEEEEEEC
T ss_pred ccccCeEe-cCC-EEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HHHHc--CCCeEEEEEEE
Confidence 34455532 235 8999999999999 99999999999999995 445542 45543 48899999987
Q ss_pred C
Q 009784 420 D 420 (526)
Q Consensus 420 ~ 420 (526)
.
T Consensus 89 ~ 89 (90)
T 1y7n_A 89 A 89 (90)
T ss_dssp C
T ss_pred C
Confidence 5
No 261
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=98.39 E-value=2.3e-07 Score=76.59 Aligned_cols=60 Identities=13% Similarity=0.235 Sum_probs=46.2
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEe--cCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEE
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDI--ANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I--~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~ 423 (526)
..+++|.+|.++|||++ | |++||+|++|||+++ .++.++. .++.. .++++.|+|.|..+.
T Consensus 27 ~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~----------~~l~~--~~~~v~l~v~~~~~~ 90 (93)
T 3o46_A 27 TGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEII----------QILAQ--SQGAITFKIIPGSKE 90 (93)
T ss_dssp TCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHH----------HHHHH--CCEEEEEEEECC---
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHH----------HHHHh--CCCeEEEEEEeCCCC
Confidence 46899999999999999 9 999999999999999 4444442 44433 345899999987654
No 262
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.38 E-value=1.7e-07 Score=81.82 Aligned_cols=62 Identities=10% Similarity=0.210 Sum_probs=49.5
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEE
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~ 423 (526)
..|++|.+|.++|||++ | |++||+|++|||++|.+..... ....+. ..++++.|+|.|+++.
T Consensus 50 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~--------~~~~~~--~~~~~v~l~v~R~~~~ 113 (124)
T 2daz_A 50 RMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQN--------ASAIIK--TAPSKVKLVFIRNEDA 113 (124)
T ss_dssp SCCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHH--------HHHHHH--HSCSEEEEEEEECTTH
T ss_pred cCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCeEEEEEEeCCCc
Confidence 36899999999999999 9 9999999999999998765432 112222 3477999999998865
No 263
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=98.38 E-value=2.5e-07 Score=78.75 Aligned_cols=58 Identities=19% Similarity=0.253 Sum_probs=47.8
Q ss_pred ccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCC--CCcccccccchhhhhhhhhcCCCCEEEEEEEECC
Q 009784 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDS 421 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~--~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G 421 (526)
..|++|..|.++|||++ ||++||+|++|||+++.++ .++. .++.. .|+++.|+|.|.+
T Consensus 44 ~~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~----------~~l~~--~~~~v~l~v~~~~ 104 (109)
T 1q3o_A 44 PALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVV----------NMIRQ--GGNTLMVKVVMVT 104 (109)
T ss_dssp CSSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHH----------HHHHH--TTTEEEEEEEEEE
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HHHHh--CCCEEEEEEEECC
Confidence 35899999999999999 9999999999999999988 4432 34433 4889999998853
No 264
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.37 E-value=8.5e-08 Score=83.00 Aligned_cols=59 Identities=22% Similarity=0.336 Sum_probs=48.9
Q ss_pred cceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecC--CCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEE
Q 009784 353 KGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (526)
Q Consensus 353 ~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~--~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~ 423 (526)
.+++|.+|.+++||++ | |++||+|++|||+++.+ +.++. .++. ..|+.++|+|.|+++.
T Consensus 42 ~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~----------~~l~--~~g~~v~l~v~r~~~~ 104 (117)
T 1v62_A 42 SVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEAT----------KLLA--SISEKVRLEILPVPQS 104 (117)
T ss_dssp CEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHH----------HHHH--SCSSEEEEEECCBTTB
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHH----------HHHH--hCCCeEEEEEEECCCC
Confidence 3599999999999999 9 99999999999999954 44432 4444 3799999999998764
No 265
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.37 E-value=1.5e-07 Score=78.99 Aligned_cols=57 Identities=16% Similarity=0.091 Sum_probs=47.0
Q ss_pred ccceEEEEeCCCCcccC-CCCCCcEEEEECCEEec--CCCCcccccccchhhhhhhhhc-CCCCEEEEEEE
Q 009784 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYLVSQK-YTGDSAAVKVL 418 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~--~~~~l~~~~~~~~~~~~~l~~~-~~G~~v~l~v~ 418 (526)
..+.+|.+|.++|||++ |||+||+|++|||++|. +++++. ..+... ..|+.+.|.|-
T Consensus 38 ~~~~~I~~V~~gSpA~~AGL~~GD~I~~Ing~~v~~~s~~dv~----------~~i~~~~~~g~~v~LLV~ 98 (101)
T 3qik_A 38 NKAVVVKSVQRGSLAEVAGLQVGRKIYSINEDLVFLRPFSEVE----------SILNQSFCSRRPLRLLVA 98 (101)
T ss_dssp TTEEEEEEECTTSHHHHHTCCTTCBEEEETTEESTTSCHHHHH----------HHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEEECCCCHHHHcCCCCCCEEEEECCEEcCcCCHHHHH----------HHHHHhhccCCeEEEEEe
Confidence 35789999999999999 99999999999999985 777764 555553 46888988774
No 266
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=98.36 E-value=1.5e-07 Score=82.71 Aligned_cols=62 Identities=13% Similarity=0.164 Sum_probs=50.5
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCC--Ccccccccchhhhhhhhhc-----CCCCEEEEEEEECCE
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDG--TVPFRHGERIGFSYLVSQK-----YTGDSAAVKVLRDSK 422 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~--~l~~~~~~~~~~~~~l~~~-----~~G~~v~l~v~R~G~ 422 (526)
..|++|.+|.+++||++ | |++||+|++|||+.+.+.. ++. .++... .+|++|+|+|.|+++
T Consensus 54 ~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~----------~~l~~~~~~~g~~~~~v~l~v~R~~~ 123 (127)
T 1wg6_A 54 DLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAM----------ETLRRSMSMEGNIRGMIQLVILRRSG 123 (127)
T ss_dssp EEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHH----------HHHHHHHHHHHHHTCEEEEEEEECSC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHH----------HHHHHhhccccCCCCEEEEEEEeCCC
Confidence 35899999999999999 9 9999999999999998755 332 444433 358899999999875
Q ss_pred E
Q 009784 423 I 423 (526)
Q Consensus 423 ~ 423 (526)
.
T Consensus 124 ~ 124 (127)
T 1wg6_A 124 P 124 (127)
T ss_dssp S
T ss_pred C
Confidence 3
No 267
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=98.36 E-value=4.8e-07 Score=95.95 Aligned_cols=69 Identities=17% Similarity=0.346 Sum_probs=59.5
Q ss_pred cceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEEEEEEEEec
Q 009784 353 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLA 431 (526)
Q Consensus 353 ~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~~~~~v~l~ 431 (526)
.|++|.+|.++|||++ ||++||+|++|||++|.++.++. .++.. .++.+.|+|.|+|+.+.++++..
T Consensus 363 ~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~----------~~l~~--~~~~v~l~v~R~g~~~~~~~~~~ 430 (436)
T 4a8c_A 363 KGIKIDEVVKGSPAAQAGLQKDDVIIGVNRDRVNSIAEMR----------KVLAA--KPAIIALQIVRGNESIYLLMRLE 430 (436)
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCHHHHH----------HHHHh--CCCeEEEEEEECCEEEEEEEEec
Confidence 5899999999999999 99999999999999999998864 55554 34589999999999988887766
Q ss_pred cc
Q 009784 432 TH 433 (526)
Q Consensus 432 ~~ 433 (526)
..
T Consensus 431 ~~ 432 (436)
T 4a8c_A 431 HH 432 (436)
T ss_pred cc
Confidence 54
No 268
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=98.34 E-value=1.5e-07 Score=79.72 Aligned_cols=59 Identities=17% Similarity=0.216 Sum_probs=47.8
Q ss_pred cceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCC--CCcccccccchhhhhhhhhcCCCCEEEEEEEECCEE
Q 009784 353 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (526)
Q Consensus 353 ~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~--~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~ 423 (526)
.+++|..|.++|||++ ||++||+|++|||+++.+. .++. ..+.. .|+.+.|+|.|.+.+
T Consensus 43 p~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~----------~~l~~--~g~~v~l~v~r~~~~ 104 (107)
T 3qe1_A 43 PLQHVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHKQVV----------DLIRA--GEKELILTVLSVESE 104 (107)
T ss_dssp CCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHH----------HHHHH--CSSEEEEEEECSSCC
T ss_pred CceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HHHHc--CCCEEEEEEEcCCCC
Confidence 4567999999999999 9999999999999999944 4432 44443 589999999997653
No 269
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.33 E-value=2.2e-07 Score=80.01 Aligned_cols=62 Identities=21% Similarity=0.239 Sum_probs=49.2
Q ss_pred cceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEEE
Q 009784 353 KGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKIL 424 (526)
Q Consensus 353 ~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~~ 424 (526)
.|++|.+|.++|||++ | |++||+|++|||+++.++.... +..++. ..++.+.|+|.|+++..
T Consensus 43 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~--------~~~~l~--~~~~~v~l~v~R~~~~~ 106 (116)
T 2dm8_A 43 NAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEE--------AITALR--QTPQKVRLVVYRDEAHY 106 (116)
T ss_dssp SSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHH--------HHHHHH--TCCSEEEEEEECCSSCC
T ss_pred CCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--hCCCeEEEEEEeCCccc
Confidence 5899999999999999 9 9999999999999998854211 113332 24689999999988753
No 270
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.33 E-value=2.2e-07 Score=80.23 Aligned_cols=62 Identities=21% Similarity=0.296 Sum_probs=49.1
Q ss_pred ccceEEEEeCCCCcccCCCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEE
Q 009784 352 QKGVRIRRVDPTAPESEVLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~ 423 (526)
..|++|.+|.+++||+.||++||+|++|||+++.+..... ....+.. .|+++.|+|.|+++.
T Consensus 45 ~~gv~V~~V~~~spA~~gL~~GD~I~~Vng~~v~~~~~~~--------~~~~l~~--~~~~v~l~v~R~~~~ 106 (117)
T 2csj_A 45 ETSIVISDVLPGGPADGLLQENDRVVMVNGTPMEDVLHSF--------AVQQLRK--SGKIAAIVVKRPRKV 106 (117)
T ss_dssp CCBCEEEEECTTSSHHHHBCTTCEEEEESSCBCBTCCHHH--------HHHHHHH--SCSEEEEEEEEEEEC
T ss_pred CCCEEEEEECCCCcccccCCCCCEEEEECCEECCCcCHHH--------HHHHHhc--CCCeEEEEEEECCcc
Confidence 4689999999999996699999999999999998865432 1122332 689999999997653
No 271
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.33 E-value=3.6e-07 Score=78.87 Aligned_cols=61 Identities=28% Similarity=0.368 Sum_probs=48.4
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCE
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~ 422 (526)
..|++|.+|.++|||++ | |++||+|++|||+++.+..... ....+ ...|+++.|+|.|.+.
T Consensus 49 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~--------~~~~~--~~~g~~v~l~v~r~~~ 111 (117)
T 2ehr_A 49 LKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSE--------AVEAI--KNAGNPVVFIVQSLSS 111 (117)
T ss_dssp CCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHHH--------HHHHH--HTSCSSEEEEECCBSC
T ss_pred cCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHH--HcCCCeEEEEEEECCC
Confidence 46899999999999999 9 9999999999999998765321 11222 2368999999988654
No 272
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.32 E-value=4.6e-08 Score=85.81 Aligned_cols=59 Identities=17% Similarity=0.275 Sum_probs=49.2
Q ss_pred ccceEEEEeCCCCcccC-CCCCCcEEEEECCEEec--CCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCE
Q 009784 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~--~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~ 422 (526)
..|++|..|.++|||++ ||++||+|++|||++|. +..++. .++.. .|+++.|+|.|+++
T Consensus 60 ~~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~----------~~l~~--~g~~v~l~v~r~~~ 121 (126)
T 2yuy_A 60 MDTIFVKQVKEGGPAFEAGLCTGDRIIKVNGESVIGKTYSQVI----------ALIQN--SDTTLELSVMPKDS 121 (126)
T ss_dssp CCCCCBCCCCSSSHHHHHTCCSSCCCCEETTEECSSCCHHHHH----------HHHHT--CTTEEEEECCCCCC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HHHHc--CCCEEEEEEEECCC
Confidence 46899999999999999 99999999999999998 444432 44443 49999999999876
No 273
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.32 E-value=2.1e-07 Score=78.11 Aligned_cols=58 Identities=19% Similarity=0.216 Sum_probs=46.7
Q ss_pred cceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCC--CCcccccccchhhhhhhhhcCCCCEEEEEEEECCE
Q 009784 353 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (526)
Q Consensus 353 ~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~--~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~ 422 (526)
.+++|..|.++|||++ ||++||+|++|||+++.++ .++ ..++.. .++++.|+|.|++.
T Consensus 36 ~~~~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~----------~~~l~~--~~~~v~l~v~R~~~ 96 (100)
T 1whd_A 36 SPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVEL----------AHEIRS--CPSEIILLVWRVSG 96 (100)
T ss_dssp SSCBCCBCCTTSHHHHHTCCSSCEEEEETTEECTTCCHHHH----------HHHHHH--CSSEEEEEEEECCS
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHH----------HHHHHc--CCCeEEEEEEECCC
Confidence 5788999999999999 9999999999999999865 332 234433 36679999999753
No 274
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=98.31 E-value=1.6e-06 Score=97.62 Aligned_cols=121 Identities=15% Similarity=0.145 Sum_probs=82.3
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEE--EEEE
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI--LNFN 427 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~--~~~~ 427 (526)
..|++|..|.+++||++ | |+.||+|++|||+.+.++.... ...++ ...|++|.|+|.|++.. ..++
T Consensus 88 ~~g~~V~~v~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~--------~~~~l--~~~g~~v~l~v~R~~~~~~~~~~ 157 (721)
T 2xkx_A 88 DPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSA--------AVEAL--KEAGSIVRLYVMRRKPPAEKVME 157 (721)
T ss_pred CCCeEEEEeCCCCHHHhcCCCCCCCEEEEECCEECCCCCHHH--------HHHHh--hccccccceEEEeccccccccee
Confidence 47899999999999999 9 9999999999999999876432 11222 24689999999999854 2345
Q ss_pred EEecccccccCCCCCCCCCceEEEeeEEEEeccc-----cceeeeeeeecc--hhhhcc-ccccceeeeecccchhhh
Q 009784 428 ITLATHRRLIPSHNKGRPPSYYIIAGFVFSRCLY-----LISVLSMERIMN--MKLRSS-FWTSSCIQCHNCQMSSLL 497 (526)
Q Consensus 428 v~l~~~~~~~p~~~~~~~p~~~i~gG~~f~~lt~-----~~~~~~~~~i~~--~~~~sg-~~~~~~~~~~~~~~~~~~ 497 (526)
+++.... . . .|+.+....- ......+..+.+ .+.++| |+.||.|...|.+-....
T Consensus 158 v~l~k~~----~-------~----lG~~i~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~ 220 (721)
T 2xkx_A 158 IKLIKGP----K-------G----LGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDV 220 (721)
T ss_pred eeeeeec----C-------C----CceeeccCCCccccCCCCceEEEEeCCCCchhhcCCCCCCCEEEEECCeeCCCC
Confidence 5554211 0 0 1333322210 122344555555 456789 999999999999766554
No 275
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.31 E-value=1.7e-07 Score=80.43 Aligned_cols=56 Identities=27% Similarity=0.416 Sum_probs=46.1
Q ss_pred cceEEEEeCCCCcccC-CCCCCcEEEEECCEEec--CCCCcccccccchhhhhhhhhcCCCCEEEEEEEE
Q 009784 353 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLR 419 (526)
Q Consensus 353 ~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~--~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R 419 (526)
.+++|..|.+++||++ ||++||+|++|||++|. ++.++. .++.. ..++++.|+|+|
T Consensus 36 ~~v~V~~V~~~spA~~aGL~~GD~Il~InG~~v~~~~~~d~~----------~~i~~-~~~~~v~l~V~~ 94 (111)
T 1vae_A 36 TPVQVHFLDPHCSASLAGAKEGDYIVSIQGVDCKWLTVSEVM----------KLLKS-FGGEEVEMKVVS 94 (111)
T ss_dssp SSCEECCCCTTSSHHHHHCCTTCEEEEETTEECSSCCHHHHH----------HHHHH-TTTSEECEEEEC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HHHHh-CCCceEEEEEEe
Confidence 4688999999999999 99999999999999999 666653 44443 356789999887
No 276
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.31 E-value=3.4e-07 Score=76.81 Aligned_cols=60 Identities=8% Similarity=0.119 Sum_probs=47.2
Q ss_pred cceEEEEeCCCCcccC--CCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEE
Q 009784 353 KGVRIRRVDPTAPESE--VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (526)
Q Consensus 353 ~Gv~V~~V~~~spA~~--GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~ 423 (526)
.+++|.+|.++|||++ ||++||+|++|||+++.+. ... ....+. ..++.+.|+|.|+++.
T Consensus 35 ~~v~V~~V~~~spA~~agGL~~GD~I~~ing~~v~~~-~~~--------~~~~~~--~~~~~v~l~v~R~~~~ 96 (100)
T 2edp_A 35 EPLTVSKIEDGGKAALSQKMRTGDELVNINGTPLYGS-RQE--------ALILIK--GSFRILKLIVRRRNSG 96 (100)
T ss_dssp EEEEECCCCTTSHHHHHTSCCTTCEEEEETTEECCSC-SHH--------HHHHHH--TCCSSCEEEEEECCCS
T ss_pred CCeEEEEECCCCHHHHcCCCCCCCEEEEECCEEccch-HHH--------HHHHHH--hCCCeEEEEEEeCCCC
Confidence 5799999999999987 8999999999999999885 211 112222 2478999999999863
No 277
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.31 E-value=9e-08 Score=82.91 Aligned_cols=65 Identities=18% Similarity=0.194 Sum_probs=49.6
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEEEE
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILN 425 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~~~ 425 (526)
..|++|.+|.+++||++ | |++||+|++|||+++.+..... +...+ ....+..+.+++.|+++.++
T Consensus 41 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~--------~~~~l-~~~~~~~~~l~v~R~~~~~~ 107 (119)
T 1x6d_A 41 NKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHD--------ALAIL-RQAREPRQAVIVTRKLTPEA 107 (119)
T ss_dssp CSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHH--------HHHHH-HHTTSSSEEEEEEECCCSSS
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHH-HhCCCCeEEEEEEcCCCccc
Confidence 46899999999999999 9 9999999999999998543321 11233 33356667799999987643
No 278
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=98.30 E-value=3.6e-07 Score=97.26 Aligned_cols=64 Identities=17% Similarity=0.288 Sum_probs=56.4
Q ss_pred cceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEEEEEEE
Q 009784 353 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNI 428 (526)
Q Consensus 353 ~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~~~~~v 428 (526)
.|++|.+|.++|||++ ||++||+|++|||++|.++.++. ..+.. .++.+.|+|.|+|+.+.+.+
T Consensus 386 ~Gv~V~~V~~gspA~~aGL~~GD~I~~Vng~~v~~~~~~~----------~~l~~--~~~~v~l~v~R~g~~~~v~l 450 (451)
T 3pv2_A 386 IGVQVVGASENSAGWRAGIRPGDIIISANKKPVTDVKSLQ----------TIAQE--KKKELLVQVLRGPGSMYLLV 450 (451)
T ss_dssp EEEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHHH----------HHTTS--SCSCEEEEEEETTEEEEEEE
T ss_pred CceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCHHHHH----------HHHhc--CCCeEEEEEEECCEEEEEEe
Confidence 6899999999999999 99999999999999999988764 55544 68899999999999987765
No 279
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=98.30 E-value=4.9e-07 Score=76.59 Aligned_cols=60 Identities=22% Similarity=0.305 Sum_probs=46.3
Q ss_pred cceEEEEeCCCCcccC-C--CCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCC--CCEEEEEEEEC
Q 009784 353 KGVRIRRVDPTAPESE-V--LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYT--GDSAAVKVLRD 420 (526)
Q Consensus 353 ~Gv~V~~V~~~spA~~-G--L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~--G~~v~l~v~R~ 420 (526)
.+++|.+|.++|||++ | |++||+|++|||+++.++.... ....+..... +..+.|+|.|+
T Consensus 43 ~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~--------~~~~i~~~~~~~~~~v~l~v~r~ 107 (107)
T 3nfk_A 43 MPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQ--------VVLFIKASCERHSGELMLLVRPN 107 (107)
T ss_dssp EEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHH--------HHHHHHCGGGSBTTBEEEEEECC
T ss_pred CCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHH--------HHHHHHhccccCCcEEEEEEEcC
Confidence 5799999999999999 9 9999999999999999875432 1133333211 35899999885
No 280
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.30 E-value=2e-07 Score=79.65 Aligned_cols=61 Identities=20% Similarity=0.282 Sum_probs=48.7
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCE
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~ 422 (526)
..|++|..|.+++||++ | |++||+|++|||+++.++.... ...++ ...++.+.|+|.|+++
T Consensus 38 ~~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~--------~~~~~--~~~~~~v~l~v~r~~~ 100 (113)
T 1um7_A 38 GEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQ--------AAAAL--KRAGQSVTIVAQYRPE 100 (113)
T ss_dssp TCCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHH--------HHHHH--HSCCSEEEEEEECCHH
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHH--HhCCCcEEEEEEECcc
Confidence 36899999999999999 9 9999999999999999875321 11222 2468999999999764
No 281
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.29 E-value=5.1e-07 Score=76.57 Aligned_cols=61 Identities=18% Similarity=0.305 Sum_probs=47.8
Q ss_pred ccceEEEEeCCCCcccC--CCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCE
Q 009784 352 QKGVRIRRVDPTAPESE--VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~--GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~ 422 (526)
..|++|.+|.++|||++ ||++||+|++|||+++.+..... ....+. ..++++.|+|+|++.
T Consensus 40 ~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~~~--------~~~~~~--~~~~~v~l~v~R~~~ 102 (107)
T 1uhp_A 40 SEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQ--------AVEAFK--TAKEPIVVQVLRRTS 102 (107)
T ss_dssp SCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCHHH--------HHHHHH--HCCSSEEEEEEECCS
T ss_pred CCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCcEEEEEEeCCC
Confidence 57899999999999986 79999999999999997654321 112232 268899999999753
No 282
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=98.29 E-value=6.3e-07 Score=77.20 Aligned_cols=69 Identities=14% Similarity=0.160 Sum_probs=50.7
Q ss_pred cccCceeeeccChhHHhhhcCCCCccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEe--cCCCCcccccccchhhhhh
Q 009784 328 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDI--ANDGTVPFRHGERIGFSYL 403 (526)
Q Consensus 328 ~~LGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I--~~~~~l~~~~~~~~~~~~~ 403 (526)
+.+|+.+..-. +...+++|.+|.++|||++ | |++||+|++|||+++ .++.++. .+
T Consensus 36 ~~lG~~l~~~~-----------~~~~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~----------~~ 94 (114)
T 2gzv_A 36 NLIGISIGGGA-----------QYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVA----------KM 94 (114)
T ss_dssp SCCSEEEEECC-----------C--CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHH----------HH
T ss_pred CcEeEEEEeCC-----------CCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHH----------HH
Confidence 45787776431 1235799999999999999 9 999999999999999 5555542 44
Q ss_pred hhhcCCCCEEEEEEEE
Q 009784 404 VSQKYTGDSAAVKVLR 419 (526)
Q Consensus 404 l~~~~~G~~v~l~v~R 419 (526)
+.. .+++++|+|.+
T Consensus 95 l~~--~~~~v~l~v~~ 108 (114)
T 2gzv_A 95 IQE--VKGEVTIHYNK 108 (114)
T ss_dssp HHH--CCSEEEEEEEC
T ss_pred HHc--CCCeEEEEEEe
Confidence 443 34568888865
No 283
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=98.28 E-value=8.5e-07 Score=73.75 Aligned_cols=50 Identities=20% Similarity=0.201 Sum_probs=40.9
Q ss_pred cccCceeeeccChhHHhhhcCCCCccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCC
Q 009784 328 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAND 387 (526)
Q Consensus 328 ~~LGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~ 387 (526)
..+|+.+.... . +...|++|.+|.++|||++ ||++||+|++|||++|.+.
T Consensus 20 ~~~Gf~v~~~~-~---------~~~~g~~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~ 70 (94)
T 3kzd_A 20 DTYGFSLSSVE-E---------DGIRRLYVNSVKETGLASKKGLKAGDEILEINNRAADAL 70 (94)
T ss_dssp -CCSEEEEEEC-S---------SSSCEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGC
T ss_pred CCcCEEEEecC-C---------CCcCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCC
Confidence 35788877652 1 1235899999999999999 9999999999999999864
No 284
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=98.28 E-value=5.5e-07 Score=79.66 Aligned_cols=62 Identities=18% Similarity=0.254 Sum_probs=48.8
Q ss_pred ccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEE
Q 009784 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~ 423 (526)
..|++|.+|.++|||++ ||++||+|++|||++|.+..... +..++.. .|+++.|+|.|.++.
T Consensus 64 ~~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~--------~~~~l~~--~g~~v~l~v~~~~~~ 126 (132)
T 3l4f_D 64 PALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQ--------VVNMIRQ--GGNTLMVKVVMVTRH 126 (132)
T ss_dssp CCSEEEEEECTTSGGGGGTCCTTCEEEEESSSBCTTSCHHH--------HHHHHHH--TTTEEEEEEECCCC-
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCEEEEEEEECCCC
Confidence 35899999999999999 99999999999999998654321 1133333 688999999997654
No 285
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.28 E-value=3.3e-07 Score=78.74 Aligned_cols=58 Identities=24% Similarity=0.400 Sum_probs=49.0
Q ss_pred ceEEEEeCCCCcccC--CCCCCcEEEEECCEEecCC--CCcccccccchhhhhhhhhcCCCCEEEEEEEECCEE
Q 009784 354 GVRIRRVDPTAPESE--VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (526)
Q Consensus 354 Gv~V~~V~~~spA~~--GL~~GDvIl~vnG~~I~~~--~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~ 423 (526)
+++|.+|.++|||++ ||++||+|++|||+++.+. .++. .++.. .|+.+.|+|.|+++.
T Consensus 44 ~~~V~~V~~~spA~~~agL~~GD~I~~ing~~v~~~~~~~~~----------~~l~~--~g~~v~l~v~r~~~~ 105 (114)
T 1uew_A 44 PHKIGRIIDGSPADRCAKLKVGDRILAVNGQSIINMPHADIV----------KLIKD--AGLSVTLRIIPQEEL 105 (114)
T ss_dssp SCEEEEECTTCTTGGGSSCCTTCBEEEETTBCTTTSCHHHHH----------HHHHH--TTTEEEEEECCCSCC
T ss_pred CeEEEEECCCChHHHhCCCCCCCEEEEECCEECCCCCHHHHH----------HHHHc--CCCeEEEEEEeCCcC
Confidence 579999999999987 9999999999999999884 4432 45544 799999999998865
No 286
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=98.28 E-value=4.4e-07 Score=85.43 Aligned_cols=59 Identities=22% Similarity=0.232 Sum_probs=48.9
Q ss_pred ccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCC--CCcccccccchhhhhhhhhcCCCCEEEEEEEECCEE
Q 009784 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~--~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~ 423 (526)
..|++|..|.++|||++ ||++||+|++|||++|.+. .++. ..+. .|+.+.|+|.|+|+.
T Consensus 109 ~~~~~V~~V~~gspA~~aGL~~GD~Il~vng~~v~~~~~~~~~----------~~l~---~~~~v~l~v~r~g~~ 170 (192)
T 3k1r_A 109 GCGLFISHLIKGGQADSVGLQVGDEIVRINGYSISSCTHEEVI----------NLIR---TEKTVSIKVRHIGLI 170 (192)
T ss_dssp TEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHH----------HHHT---SSSEEEEEEEECCEE
T ss_pred CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HHHc---CCCeEEEEEEECCcc
Confidence 35899999999999999 9999999999999999873 3321 3332 289999999999983
No 287
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.28 E-value=2.2e-07 Score=79.36 Aligned_cols=60 Identities=17% Similarity=0.213 Sum_probs=48.8
Q ss_pred cceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCC--CcccccccchhhhhhhhhcC--CCCEEEEEEEECCE
Q 009784 353 KGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDG--TVPFRHGERIGFSYLVSQKY--TGDSAAVKVLRDSK 422 (526)
Q Consensus 353 ~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~--~l~~~~~~~~~~~~~l~~~~--~G~~v~l~v~R~G~ 422 (526)
.+++|.+|.+++||++ | |++||+|++|||+.+.+.. ++ ..++.... .|.+++|++.|+++
T Consensus 41 ~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~----------~~~l~~~~~r~~~~~~l~v~R~~~ 106 (109)
T 1wi4_A 41 PLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEA----------KSIITRAKLRSESPWEIAFIRSGP 106 (109)
T ss_dssp SSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHH----------HHHHHHSCCSSSSCEEEEEECCCC
T ss_pred CCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHH----------HHHHHccccCCCceEEEEEEeCCC
Confidence 4799999999999999 9 9999999999999998743 32 24444432 48899999999875
No 288
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=98.27 E-value=3.1e-07 Score=85.81 Aligned_cols=62 Identities=15% Similarity=0.192 Sum_probs=51.1
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecC--CCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEEEE
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILN 425 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~--~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~~~ 425 (526)
..|++|.+|.++|||++ | |++||+|++|||++|.+ +.++. ..+. ..++.+.|+|.|+++...
T Consensus 129 ~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~----------~~l~--~~~~~v~l~v~R~~~~~~ 194 (196)
T 3gsl_A 129 DNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAV----------AALK--NTYDVVYLKVAKPSNAET 194 (196)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCBHHHHH----------HHHH--SCCEEEEEEEEEESCCCE
T ss_pred CCCEEEEEECCCChHHhcCCCCCCCEEEEECCCcCCCCCHHHHH----------HHHH--cCCCeEEEEEeCCCCccc
Confidence 36899999999999999 9 99999999999999988 44432 4443 358899999999887644
No 289
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=98.27 E-value=6.2e-07 Score=77.80 Aligned_cols=60 Identities=23% Similarity=0.320 Sum_probs=47.3
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECC
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDS 421 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G 421 (526)
..|++|.+|.++|||++ | |++||+|++|||+.+.+..... +..++. ..++++.|+|.|..
T Consensus 52 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~--------~~~~l~--~~~~~v~L~v~R~~ 113 (118)
T 3b76_A 52 DLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSE--------AVALLK--RTSSSIVLKALEVK 113 (118)
T ss_dssp CCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHH--------HHHHHH--SCCSEEEEEEEEEE
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCeEEEEEEECC
Confidence 46899999999999999 9 9999999999999999443221 113333 35889999999954
No 290
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=98.27 E-value=4.2e-07 Score=95.02 Aligned_cols=62 Identities=16% Similarity=0.287 Sum_probs=51.9
Q ss_pred ccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCC--CCcccccccchhhhhhhhhcCCCCEEEEEEEECCEE
Q 009784 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~--~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~ 423 (526)
..|++|.+|.++|||++ ||++||+|++|||+++.+. .++. ..+....+|++++|+|.|+|+.
T Consensus 30 ~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~e~~----------~~l~~~~~g~~v~l~v~r~~~~ 94 (391)
T 3tsz_A 30 DVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAV----------LFLLDLPKGEEVTILAQKKKDV 94 (391)
T ss_dssp TTEEEEEEECTTCHHHHTTCCTTEEEEEETTEECTTCCHHHHH----------HHHHHSCTTSEEEEEEEECHHH
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HHHHhhcCCCeEEEEEeeCCcc
Confidence 37999999999999999 9999999999999999873 3332 4555546899999999998754
No 291
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.26 E-value=5.3e-07 Score=77.75 Aligned_cols=68 Identities=21% Similarity=0.197 Sum_probs=51.4
Q ss_pred cCceeeeccChhHHhhhcCCCCccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCCC--Ccccccccchhhhhhhhh
Q 009784 330 LGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDG--TVPFRHGERIGFSYLVSQ 406 (526)
Q Consensus 330 LGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~~--~l~~~~~~~~~~~~~l~~ 406 (526)
+|+.+.... .. ...|++|.+|.++|||++ ||++||+|++|||++|.++. ++ ..++.
T Consensus 31 ~G~~v~~~~-~~---------~~~gv~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~----------~~~l~- 89 (114)
T 2d8i_A 31 YGFSLSSVE-ED---------GIRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSML----------KDFLS- 89 (114)
T ss_dssp CCCEEEEEE-ET---------TEEEEEEEECCTTSSHHHHTCCTTCCEEEESSCBGGGCCHHHH----------HHHHT-
T ss_pred cCEEEEecC-cC---------CcCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCcCHHHH----------HHHHh-
Confidence 577777651 11 125899999999999999 99999999999999999863 32 13332
Q ss_pred cCCCCEEEEEEEECC
Q 009784 407 KYTGDSAAVKVLRDS 421 (526)
Q Consensus 407 ~~~G~~v~l~v~R~G 421 (526)
+..+.|+|.|..
T Consensus 90 ---~~~v~l~v~R~p 101 (114)
T 2d8i_A 90 ---QPSLGLLVRTYP 101 (114)
T ss_dssp ---SSEEEEEEEECC
T ss_pred ---CCcEEEEEEECC
Confidence 348889988865
No 292
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.25 E-value=4e-07 Score=85.93 Aligned_cols=62 Identities=27% Similarity=0.465 Sum_probs=51.9
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEec--CCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEEEE
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILN 425 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~--~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~~~ 425 (526)
..|++|.+|.++|||++ | |++||+|++|||++|. ++.++. .++.. .|+.+.|+|.|+++.++
T Consensus 134 ~~g~~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~----------~~l~~--~~~~v~l~v~R~~~~~~ 199 (200)
T 2qt5_A 134 SRPVVITCVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAM----------SILKQ--CGQEATLLIEYDVSVMD 199 (200)
T ss_dssp CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHH----------HHHHT--TCSEEEEEEEEEEEC--
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHH----------HHHHc--CCCeEEEEEEECCccCC
Confidence 46899999999999999 9 9999999999999999 666653 45544 78999999999987653
No 293
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=98.23 E-value=1.6e-06 Score=90.55 Aligned_cols=69 Identities=20% Similarity=0.272 Sum_probs=55.9
Q ss_pred ccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCCC--CcccccccchhhhhhhhhcCCCCEEEEEEEECCE---EEE
Q 009784 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDG--TVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK---ILN 425 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~~--~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~---~~~ 425 (526)
..+++|.+|.++|||++ ||++||+|++|||++|.++. ++ ..++ ...+|++|+|+|.|+|+ .++
T Consensus 98 ~~~~~V~~v~~~spA~~aGl~~GD~I~~Ing~~v~~~~~~~~----------~~~l-~~~~g~~v~l~v~r~g~~~~~~~ 166 (388)
T 1fc6_A 98 GKDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGMSLYDV----------SDLL-QGEADSQVEVVLHAPGAPSNTRT 166 (388)
T ss_dssp SSCEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHH----------HHHH-CBSTTCEEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHH----------HHHH-hcCCCCEEEEEEEeCCCCcceEE
Confidence 46899999999999999 99999999999999999863 32 1334 34679999999999998 566
Q ss_pred EEEEec
Q 009784 426 FNITLA 431 (526)
Q Consensus 426 ~~v~l~ 431 (526)
++++..
T Consensus 167 ~~l~r~ 172 (388)
T 1fc6_A 167 LQLTRQ 172 (388)
T ss_dssp EEEECB
T ss_pred EEEEEc
Confidence 665543
No 294
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.22 E-value=3.9e-08 Score=94.54 Aligned_cols=68 Identities=25% Similarity=0.432 Sum_probs=55.1
Q ss_pred ccceEEEEeCCCCcccC-CCCCCcEEEEECCEEec--CCCCcccccccchhhhhhhhhcCCCCEE-EEEEEECCEEE--E
Q 009784 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYLVSQKYTGDSA-AVKVLRDSKIL--N 425 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~--~~~~l~~~~~~~~~~~~~l~~~~~G~~v-~l~v~R~G~~~--~ 425 (526)
..|++|..|.+++||++ ||++||+|++|||+.|. ++.++. .++... |+.+ .|+|.|+|+.. +
T Consensus 32 ~~gv~V~~V~~gSpA~~aGL~~GD~Il~VNG~~V~~~s~~dl~----------~~l~~~--g~~v~~l~V~R~g~~~~~~ 99 (216)
T 2krg_A 32 KPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVV----------SAIRAG--GDETKLLVVDRETDEFFKK 99 (216)
T ss_dssp SCSCBEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCTHHHH----------HHHHHH--CSEEEEEECCHHHHHHHHH
T ss_pred CCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HHHHhc--CCeEEEEEEEECCEEEEEE
Confidence 35899999999999999 99999999999999999 666643 455444 8899 99999999876 4
Q ss_pred EEEEec
Q 009784 426 FNITLA 431 (526)
Q Consensus 426 ~~v~l~ 431 (526)
+++++.
T Consensus 100 v~v~p~ 105 (216)
T 2krg_A 100 CRVIPS 105 (216)
T ss_dssp HTCCCC
T ss_pred EEEEEe
Confidence 555443
No 295
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.21 E-value=2.2e-07 Score=79.43 Aligned_cols=61 Identities=20% Similarity=0.227 Sum_probs=48.2
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCE
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~ 422 (526)
..|++|.+|.++|||++ | |++||+|++|||+++.+..... +..++ ...|+++.|+|.|+..
T Consensus 43 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~--------~~~~l--~~~g~~v~l~v~r~~~ 105 (111)
T 1uju_A 43 DEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGE--------AVQLL--RSVGDTLTVLVCDGFE 105 (111)
T ss_dssp CCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHH--------HHHHH--SSCSSEEEECCCCCCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHH--HcCCCeEEEEEEECCC
Confidence 56899999999999999 9 9999999999999998643221 11223 2368999999999754
No 296
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.20 E-value=5.7e-07 Score=76.51 Aligned_cols=58 Identities=12% Similarity=0.136 Sum_probs=46.8
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCC--CcccccccchhhhhhhhhcCCCCEEEEEEEEC
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDG--TVPFRHGERIGFSYLVSQKYTGDSAAVKVLRD 420 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~--~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~ 420 (526)
..|++|.+|.+++||++ | |++||+|++|||+++.+.. ++. .++.. ..++++.|+|.|.
T Consensus 43 ~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~----------~~l~~-~~~~~v~l~v~R~ 104 (108)
T 2d92_A 43 RSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAV----------EILKA-VPPGLVHLGICSG 104 (108)
T ss_dssp CEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHH----------HHHHH-SCSEEEEEEEECC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHH----------HHHHh-CCCCeEEEEEEcC
Confidence 57899999999999999 9 9999999999999997643 321 33433 3567899999985
No 297
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=98.20 E-value=3.2e-06 Score=72.64 Aligned_cols=61 Identities=18% Similarity=0.164 Sum_probs=47.9
Q ss_pred cceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCCC--CcccccccchhhhhhhhhcCCCCEEEEEEEECCEEEE
Q 009784 353 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDG--TVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILN 425 (526)
Q Consensus 353 ~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~~--~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~~~ 425 (526)
.|..|.+|.+ +++. ||++||+|++|||+++.+.. ++. .++.....|+++.|+|.|+|....
T Consensus 34 ~g~~V~~I~~--~~~~aGL~~GD~Il~VNG~~v~~~~h~evv----------~~lk~~~~G~~v~L~V~R~g~~~p 97 (113)
T 3soe_A 34 TGQKVKMILD--SQWCQGLQKGDIIKEIYHQNVQNLTHLQVV----------EVLKQFPVGADVPLLILRGGPPSP 97 (113)
T ss_dssp TEEEEEEESC--GGGSTTCCTTCEEEEETTEECTTSCHHHHH----------HHHHHSCTTCEEEEEEEESSCC--
T ss_pred CCcEEEEecC--hHHhCCCCCCCEEEEECCEECCCCCHHHHH----------HHHHcCCCCCEEEEEEEECCccCc
Confidence 3666888877 5666 99999999999999999764 443 566666679999999999986543
No 298
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=98.18 E-value=1.7e-06 Score=75.41 Aligned_cols=58 Identities=14% Similarity=0.175 Sum_probs=45.4
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEE
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLR 419 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R 419 (526)
..+++|.+|.++|||++ | |++||+|++|||+++.+..... +...+.. .+++++|+|.|
T Consensus 44 ~~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~--------~~~~l~~--~~~~v~l~v~r 103 (125)
T 3hpk_A 44 CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVE--------VAKMIQE--VKGEVTIHYNK 103 (125)
T ss_dssp CSSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHH--------HHHHHHH--SCSEEEEEEEE
T ss_pred CCCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCeEEEEEEE
Confidence 36799999999999999 9 9999999999999998543211 1133433 46679999998
No 299
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=98.18 E-value=1.9e-06 Score=72.60 Aligned_cols=61 Identities=18% Similarity=0.269 Sum_probs=46.1
Q ss_pred cceEEEEeCCCCcccC--CCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEE
Q 009784 353 KGVRIRRVDPTAPESE--VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (526)
Q Consensus 353 ~Gv~V~~V~~~spA~~--GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~ 423 (526)
.|++|.+|.++|||++ ||++||+|++|||+++.+..... ...++.. .+++++|++.|....
T Consensus 35 ~~~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~~v~~~~~~~--------~~~~l~~--~~~~v~l~v~~~~~~ 97 (103)
T 2dc2_A 35 VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKE--------AVTILSQ--QRGEIEFEVVYVALE 97 (103)
T ss_dssp EEEEEEEECTTSHHHHHTCCCSSEEEEEETTEESTTSCHHH--------HHHHHHH--CCSEEEEEEEECC--
T ss_pred CCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHh--CCCcEEEEEEecCCc
Confidence 5899999999999987 99999999999999997753211 1133332 467999999997643
No 300
>2pka_B Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_B 1hia_B
Probab=98.17 E-value=9.8e-06 Score=72.99 Aligned_cols=124 Identities=15% Similarity=0.121 Sum_probs=72.6
Q ss_pred cCCCeEEEEecccc-cccCceeeecCCCC-cCCCcEEEEeeCCCCC----------ceeEEEEEEeceeeeeccCCceee
Q 009784 194 TECDIAMLTVEDDE-FWEGVLPVEFGELP-ALQDAVTVVGYPIGGD----------TISVTSGVVSRIEILSYVHGSTEL 261 (526)
Q Consensus 194 ~~~DlAlLkv~~~~-~~~~~~pl~l~~~~-~~g~~V~~iG~p~~~~----------~~sv~~GiVs~~~~~~~~~~~~~~ 261 (526)
..+||||||++.+. +...+.|+.|.... ..++.+++.||..... ...+..-+++...+..........
T Consensus 6 ~~nDIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~v~GWG~~~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~ 85 (152)
T 2pka_B 6 YSHDLMLLRLQSPAKITDAVKVLELPTQEPELGSTCEASGWGSIEPGPDDFEFPDEIQCVQLTLLQNTFCADAHPDKVTE 85 (152)
T ss_dssp CTTCCEEEEESSCCCCCSSCCCCCCCSSCCCTTCEEEEEESSCSSCCSSCCCCCSBCEEEEEEEECHHHHHHHCSSBCCT
T ss_pred CCCCEEEEEECCCCcCCCCEEeEECCCCCCCCCCEEEEEecccccCCCCcCCCCccceEEEeEEcCHHHhhhhhcCCCCC
Confidence 35899999999763 44568888887533 4688999999864321 122334444443332211111112
Q ss_pred eEEEEc-----ccCCCCCCCCeeecCCCeEEEEEeec-cccCccccccccccHHHHHHHHHHH
Q 009784 262 LGLQID-----AAINSGNSGGPAFNDKGKCVGIAFQS-LKHEDVENIGYVIPTPVIMHFIQDY 318 (526)
Q Consensus 262 ~~i~~d-----a~i~~G~SGGPlvn~~G~VVGI~~~~-~~~~~~~~~~~aIP~~~i~~~l~~l 318 (526)
.+|++. ...|.|+|||||+.. |+++||++.+ ..-.....-+...-+....+++++.
T Consensus 86 ~~iCa~~~~~~~~~C~GDsGgPL~~~-g~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~ 147 (152)
T 2pka_B 86 SMLCAGYLPGGKDTCMGDSGGPLICN-GMWQGITSWGHTPCGSANKPSIYTKLIFYLDWIDDT 147 (152)
T ss_dssp TEEEEECTTSSCBCCTTCTTCEEEET-TEEEEEECCCCSSTTCTTCCEEEEEGGGGHHHHHHH
T ss_pred CEEeeccCCCCCcccCCccccceEEC-CEEEEEEecCCCCCCCCCCCeEEEEHHHHHHHHHHH
Confidence 346553 357899999999974 8999999876 2111111223334444445555544
No 301
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=98.17 E-value=8.4e-07 Score=72.63 Aligned_cols=56 Identities=23% Similarity=0.322 Sum_probs=44.3
Q ss_pred cceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecC--CCCcccccccchhhhhhhhhcCCCCEEEEEEEEC
Q 009784 353 KGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRD 420 (526)
Q Consensus 353 ~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~--~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~ 420 (526)
.|++|.+|.++|||++ | |++||+|++|||+++.+ +.++. .++.. .++++.|++.+.
T Consensus 21 ~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~----------~~i~~--~~~~v~L~v~~~ 80 (88)
T 3e17_A 21 SQIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDAR----------KLIEK--SRGKLQLVVLRD 80 (88)
T ss_dssp EEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHH----------HHHHH--TTTEEEEEECCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHH----------HHHHc--CCCeEEEEEeCC
Confidence 5899999999999999 9 99999999999999954 33332 44443 356888888764
No 302
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=98.16 E-value=9.4e-07 Score=94.01 Aligned_cols=62 Identities=16% Similarity=0.306 Sum_probs=52.6
Q ss_pred ccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecC--CCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEE
Q 009784 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~--~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~ 423 (526)
..|++|.+|.++|||++ ||++||+|++|||+.|.+ ..++. ..+....+|++++|+|.|+|+.
T Consensus 22 ~~Gi~V~~V~~gspA~~aGL~~GD~Il~VNG~~v~~~t~~e~~----------~~L~~~~~g~~v~L~V~r~g~~ 86 (468)
T 3shw_A 22 DVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAV----------LFLLDLPKGEEVTILAQKKKDV 86 (468)
T ss_dssp TTEEEEEEECSSSHHHHTTCCTTEEEEEETTEECTTCCHHHHH----------HHHHHSCTTSEEEEEEEECHHH
T ss_pred cCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HHHHhcCCCCEEEEEEEECCcc
Confidence 37899999999999999 999999999999999987 34432 5566656899999999998753
No 303
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=98.15 E-value=1.7e-06 Score=70.23 Aligned_cols=57 Identities=18% Similarity=0.300 Sum_probs=44.3
Q ss_pred cceEEEEeCCCCcccC--CCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEE
Q 009784 353 KGVRIRRVDPTAPESE--VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLR 419 (526)
Q Consensus 353 ~Gv~V~~V~~~spA~~--GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R 419 (526)
.|++|.+|.++|||++ ||++||+|++|||+++.+..... +...+. ..++++.|+|.+
T Consensus 28 ~~~~V~~V~~gspA~~~agl~~GD~I~~vng~~v~~~~~~~--------~~~~~~--~~~~~v~l~v~~ 86 (87)
T 4e34_A 28 VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKE--------AVTILS--QQRGEIEFEVVY 86 (87)
T ss_dssp EEEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHH--------HHHHHH--HCCSEEEEEEEE
T ss_pred CCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCeEEEEEEE
Confidence 5799999999999985 99999999999999998764321 113333 367889888864
No 304
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=98.11 E-value=2.2e-06 Score=79.20 Aligned_cols=59 Identities=12% Similarity=0.223 Sum_probs=47.6
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEEC
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRD 420 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~ 420 (526)
..|++|.+|.+++||++ | |++||+|++|||+.+.+..... ...++.. .|+.|.|+|.|+
T Consensus 110 ~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~--------~~~~l~~--~g~~v~L~V~R~ 170 (170)
T 3egg_C 110 KLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSF--------AASVLRN--TKGRVRFMIGRE 170 (170)
T ss_dssp SBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHH--------HHHHHHH--CCSEEEEEEEEC
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCEEEEEEEeC
Confidence 46899999999999999 9 9999999999999997654321 1133433 688999999995
No 305
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.11 E-value=1.7e-06 Score=76.16 Aligned_cols=63 Identities=17% Similarity=0.257 Sum_probs=47.8
Q ss_pred ccceEEEEeCCCCcccC--CCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEE
Q 009784 352 QKGVRIRRVDPTAPESE--VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~--GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~ 423 (526)
..+++|.+|.+++||++ ||++||+|++|||+.+.+...-. ...++ +...+..+.|+|.|++..
T Consensus 56 ~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~--------~~~~l-~~~~~~~v~l~v~r~~~~ 120 (130)
T 1i16_A 56 DKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFE--------AWNII-KALPDGPVTIVIRRKSLQ 120 (130)
T ss_dssp CCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHH--------HHHHH-HTSCSSEEEEEEEEESSC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHH-HhCCCceEEEEEEeCCCC
Confidence 45799999999999987 89999999999999998752211 11333 334567899999997543
No 306
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.10 E-value=5.6e-07 Score=77.96 Aligned_cols=57 Identities=14% Similarity=0.095 Sum_probs=45.6
Q ss_pred ceEEEEeCCCCcccC--CCCCCcEEEEECCEEecCCC--Ccccccccchhhhhhhhhc--CCCCEEEEEEEEC
Q 009784 354 GVRIRRVDPTAPESE--VLKPSDIILSFDGIDIANDG--TVPFRHGERIGFSYLVSQK--YTGDSAAVKVLRD 420 (526)
Q Consensus 354 Gv~V~~V~~~spA~~--GL~~GDvIl~vnG~~I~~~~--~l~~~~~~~~~~~~~l~~~--~~G~~v~l~v~R~ 420 (526)
.++|.+|.++|||++ ||++||+|++|||+++.++. ++. .++... ..|++|+|+|.|.
T Consensus 44 ~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~~~----------~~l~~~~~~~g~~v~l~v~r~ 106 (118)
T 1v6b_A 44 KVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAE----------AALQKAWNQGGDWIDLVVAVC 106 (118)
T ss_dssp SEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHH----------HHHHHHHHHTCSEEEEEEECC
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHH----------HHHHHhhhcCCCeEEEEEEeC
Confidence 489999999999987 89999999999999998754 321 334332 1489999999994
No 307
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=98.09 E-value=3.3e-06 Score=79.75 Aligned_cols=59 Identities=19% Similarity=0.146 Sum_probs=47.0
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEEC
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRD 420 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~ 420 (526)
..|++|.+|.++|||++ | |++||+|++|||++|.++.... +..++. ..++.+.|+|.|.
T Consensus 135 ~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~~--------~~~~l~--~~~~~v~L~V~R~ 195 (206)
T 3r0h_A 135 EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQV--------CYALFK--GANGKVSMEVTRP 195 (206)
T ss_dssp SSCEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHH--------HHHHHH--TCCSEEEEEEEEE
T ss_pred CceEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCeEEEEEEeC
Confidence 36899999999999999 8 9999999999999999764321 113332 3578999999994
No 308
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=98.07 E-value=8.6e-07 Score=74.75 Aligned_cols=54 Identities=15% Similarity=0.282 Sum_probs=43.6
Q ss_pred ccceEEEEeCCCCcccC-CCCCCcEEEEECCEEec--CCCCcccccccchhhhhhhhhcCCCCEEEEEE
Q 009784 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYLVSQKYTGDSAAVKV 417 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~--~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v 417 (526)
..|++|..|.+++||++ ||++||+|++|||++|. +..++. .++... +++++|+|
T Consensus 47 ~~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~----------~~l~~~--~~~v~l~v 103 (104)
T 2z17_A 47 EMFTLICKIQEDSPAHCAGLQAGDVLANINGVSTEGFTYKQVV----------DLIRSS--GNLLTIET 103 (104)
T ss_dssp SCCEEEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCHHHHH----------HHHHHT--TTEEEEEC
T ss_pred CCCeEEEEECCCChHHHcCCCCCCEEEEECCEEcCCCCHHHHH----------HHHHhC--CCcEEEEE
Confidence 46899999999999999 99999999999999998 445543 455543 44788765
No 309
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.07 E-value=9.6e-07 Score=76.37 Aligned_cols=63 Identities=19% Similarity=0.255 Sum_probs=47.2
Q ss_pred cceEEEEeCCCCcccC---CCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcC--CCCEEEEEEEECCEE
Q 009784 353 KGVRIRRVDPTAPESE---VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKY--TGDSAAVKVLRDSKI 423 (526)
Q Consensus 353 ~Gv~V~~V~~~spA~~---GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~--~G~~v~l~v~R~G~~ 423 (526)
.|++|.+|.++|||++ ||++||+|++|||+++.+..... +..++.... .++++.|+|.|++..
T Consensus 41 ~~v~V~~V~~~spA~~a~gGL~~GD~Il~ing~~v~~~~~~~--------~~~~~~~~~~~~~~~v~l~v~R~~~~ 108 (119)
T 2cs5_A 41 MPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQ--------VVLFIKASCERHSGELMLLVRPNAVY 108 (119)
T ss_dssp EEEEEEEECSSSTTTSSSSCCCTTCEEEEETTBCTTSSCHHH--------HHHHHHHHHHCCSSCEEEEEECCCCC
T ss_pred CCeEEEEECCCCHHHHhhcCCCCCCEEEEECCEECCCCCHHH--------HHHHHHhccccCCCEEEEEEEccccc
Confidence 5799999999999987 89999999999999998763321 112333221 135899999998654
No 310
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.07 E-value=1.3e-06 Score=82.22 Aligned_cols=58 Identities=17% Similarity=0.225 Sum_probs=49.8
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecC--CCCcccccccchhhhhhhhhcCCCCEEEEEEEECC
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDS 421 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~--~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G 421 (526)
..|++|.+|.++|||++ | |++||+|++|||+++.+ +.++. .++... |+.+.|+|+|++
T Consensus 134 ~~gv~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~----------~~l~~~--~~~v~l~v~R~~ 195 (196)
T 1p1d_A 134 GDPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDSCSMEDAV----------QILQQC--EDLVKLKIRKDE 195 (196)
T ss_dssp TCCCEEEECCSSSHHHHTSCCCTTCEEEEETTEEGGGCCHHHHH----------HHHHHC--TTCEEEEEECCC
T ss_pred CCCEEEEEECCCCcHHhcCCCCCCCEEEEECCEECCCCCHHHHH----------HHHHhC--CCEEEEEEEeCC
Confidence 36899999999999998 9 99999999999999998 55543 555553 899999999986
No 311
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=98.06 E-value=3.1e-06 Score=88.66 Aligned_cols=57 Identities=19% Similarity=0.208 Sum_probs=48.4
Q ss_pred ceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEE
Q 009784 354 GVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (526)
Q Consensus 354 Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~ 423 (526)
.++|..|.++|||++ |||+||+|++|||++|.++. +. .++.. +|++++|++.|+|+.
T Consensus 91 ~~~V~~V~~gsPA~~AGL~~GD~I~~InG~~v~~~~-~~----------~~l~~--~g~~v~l~v~R~g~~ 148 (403)
T 3k50_A 91 NALISYVVPGSPAEEAGLQRGHWIMMMNGDYITKKV-ES----------ELLQG--STRQLQIGVYKEVVG 148 (403)
T ss_dssp EEEEEEECTTSHHHHTTCCTTCEEEEETTBCBCTTT-GG----------GGTSC--SCEEEEEEEEEEEC-
T ss_pred eEEEEEeCCCChHHHcCCCCCCEEEEECCEEccchh-HH----------HHhhC--CCCEEEEEEEeCCcc
Confidence 478999999999999 99999999999999999874 42 44433 899999999998864
No 312
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=98.04 E-value=2.1e-05 Score=88.50 Aligned_cols=64 Identities=14% Similarity=0.128 Sum_probs=51.7
Q ss_pred ccceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEEEE
Q 009784 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILN 425 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~~~ 425 (526)
..|++|.+|.++|||++ | |++||+|++|||++|.++.... +...+. ..|+.|.|+|.|+|+...
T Consensus 183 ~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~--------~~~~l~--~~~~~v~l~V~R~g~~~~ 248 (721)
T 2xkx_A 183 DNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHED--------AVAALK--NTYDVVYLKVAKPSNAYL 248 (721)
T ss_pred CCceEEEEeCCCCchhhcCCCCCCCEEEEECCeeCCCCCHHH--------HHHHHH--cCCCeEEEEEEeCCcccc
Confidence 47999999999999999 9 9999999999999999875321 112332 358899999999997653
No 313
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.93 E-value=2.3e-06 Score=72.20 Aligned_cols=59 Identities=15% Similarity=0.198 Sum_probs=46.6
Q ss_pred ceEEEEeCCCCcccC-C-CCCCcEEEEECCEEecC--CCCcccccccchhhhhhhhh---cCCCCEEEEEEEECCE
Q 009784 354 GVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYLVSQ---KYTGDSAAVKVLRDSK 422 (526)
Q Consensus 354 Gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~I~~--~~~l~~~~~~~~~~~~~l~~---~~~G~~v~l~v~R~G~ 422 (526)
+++|.+|.+++||++ | |++||.|++|||+++.+ +.++. .++.. ...++.+++.|.|.++
T Consensus 33 ~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~----------~~l~~~~~~~~~~~i~l~v~r~~~ 98 (103)
T 1ufx_A 33 LPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAA----------RIIAEAFKTKDRDYIDFLVTEFNS 98 (103)
T ss_dssp SCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHH----------HHHHHHHHCSSCSEEEEEECCCCC
T ss_pred cEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHH----------HHHHHhcccCCCCeEEEEEEEccc
Confidence 458999999999999 9 99999999999999976 33332 33333 2358899999999764
No 314
>1lvm_A Catalytic domain of the nuclear inclusion protein A (NIA); beta barrel, chymotrypsin-type cystein protease, enzyme- peptide complex; 1.80A {Tobacco etch virus} SCOP: b.47.1.3 PDB: 1lvb_A 1q31_A
Probab=97.92 E-value=0.0006 Score=65.01 Aligned_cols=171 Identities=15% Similarity=0.196 Sum_probs=104.2
Q ss_pred hcccCCCeEEEEeeeeCCCCCCccccCCCcceEEEEEEEe-CCEEEecccccCCC-CeEEEEEcCCCcEEEEE-----EE
Q 009784 118 VVPAMDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFAIG-GRRVLTNAHSVEHY-TQVKLKKRGSDTKYLAT-----VL 190 (526)
Q Consensus 118 ~~~~~~SVV~I~~~~~~~~~~~P~~~~~~~~~~GSGfvI~-~g~ILT~aHvV~~~-~~i~V~~~~~g~~~~a~-----vv 190 (526)
-.+....|+++...... ...+=+-|. ..||+|++|..+.. ..++|+.. .|. |... -+
T Consensus 19 yn~Ia~~ic~l~n~sdg--------------~~~~l~gigyG~~iItn~HLf~~nnG~L~I~s~-hG~-f~v~nt~~lki 82 (229)
T 1lvm_A 19 YNPISSTICHLTNESDG--------------HTTSLYGIGFGPFIITNKHLFRRNNGTLLVQSL-HGV-FKVKNTTTLQQ 82 (229)
T ss_dssp CHHHHTTEEEEEEEETT--------------EEEEEEEEEETTEEEECGGGGGCCSSEEEEEET-TEE-EEESCGGGSEE
T ss_pred CChhheEEEEEEeccCC--------------ceEEEEEEeECCEEEeChhhhccCCCcEEEEeC-CCe-EEeCCCCceee
Confidence 34445588888876511 223333344 67999999999865 67888874 332 3211 13
Q ss_pred EeccCCCeEEEEecccccccCceeeecC---CCCcCCCcEEEEeeCCCCCceeEEEEEEeceeeeeccCCceeeeEEEEc
Q 009784 191 AIGTECDIAMLTVEDDEFWEGVLPVEFG---ELPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQID 267 (526)
Q Consensus 191 ~~d~~~DlAlLkv~~~~~~~~~~pl~l~---~~~~~g~~V~~iG~p~~~~~~sv~~GiVs~~~~~~~~~~~~~~~~i~~d 267 (526)
..=+..||.++|++.+ ++|.+-. ..+..+++|..+|..+..... ...||.........+.. +...=
T Consensus 83 ~~i~g~DiiiIrmPkD-----fpPf~~~l~FR~P~~~e~V~lVg~~fq~k~~---~s~vSesS~i~p~~~~~---fWkHw 151 (229)
T 1lvm_A 83 HLIDGRDMIIIRMPKD-----FPPFPQKLKFREPQREERICLVTTNFQTKSM---SSMVSDTSCTFPSSDGI---FWKHW 151 (229)
T ss_dssp EECTTSSCEEEECCTT-----SCCCCSCCCBCCCCTTCEEEEEEEECSSSSC---EEEECCCEECEEETTTT---EEEEC
T ss_pred EEeCCccEEEEeCCCc-----CCCcccccccCCCCCCCeEEEEEeEeecCCc---cEEECCcceeEecCCCC---EeEEE
Confidence 4446799999999875 3444321 467789999999987664431 12344332221111111 12222
Q ss_pred ccCCCCCCCCeeecC-CCeEEEEEeeccccCcccccccccc--HHHHHHHHHHHH
Q 009784 268 AAINSGNSGGPAFND-KGKCVGIAFQSLKHEDVENIGYVIP--TPVIMHFIQDYE 319 (526)
Q Consensus 268 a~i~~G~SGGPlvn~-~G~VVGI~~~~~~~~~~~~~~~aIP--~~~i~~~l~~l~ 319 (526)
..+..|+=|.|+++. +|.+|||++.... ....+|+.| -+.+ ++|+...
T Consensus 152 IsT~~G~CGlPlVs~~Dg~IVGiHsl~~~---~~~~NyF~~f~~~f~-~~L~~~~ 202 (229)
T 1lvm_A 152 IQTKDGQCGSPLVSTRDGFIVGIHSASNF---TNTNNYFTSVPKNFM-ELLTNQE 202 (229)
T ss_dssp BCCCTTCTTCEEEETTTCCEEEEEEEEET---TSCSEEEEECCTTHH-HHHHCGG
T ss_pred eeCCCCcCCCcEEECCCCcEEEEEccccc---CCCeEEEeCCCHHHH-HHHhccc
Confidence 345679999999986 8999999988652 233566654 4455 7777664
No 315
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=97.92 E-value=8.8e-06 Score=65.84 Aligned_cols=53 Identities=11% Similarity=0.204 Sum_probs=42.1
Q ss_pred EEEeCCCCcccC-CCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEE
Q 009784 357 IRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLR 419 (526)
Q Consensus 357 V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R 419 (526)
|.++.+++||++ ||++||+|++|||+.+.....-. ...++. ..|.+|+|+|..
T Consensus 27 I~~v~~gspA~~aGl~~GD~Il~VNG~~v~~~~~~e--------vv~llr--~~g~~V~L~v~p 80 (82)
T 1r6j_A 27 ITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQ--------IADILS--TSGTVVTITIMP 80 (82)
T ss_dssp EEEECTTSHHHHHTCCSSEEEEEETTEECTTCCHHH--------HHHHHH--HSCSEEEEEEEE
T ss_pred EEEecCCCHHHHcCCCCCCEEEEECCEEcCCCCHHH--------HHHHHh--cCCCEEEEEEEe
Confidence 789999999999 99999999999999997765211 113343 478999999864
No 316
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=97.89 E-value=1.6e-06 Score=92.21 Aligned_cols=65 Identities=17% Similarity=0.309 Sum_probs=0.0
Q ss_pred ccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEEEEEEE
Q 009784 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNI 428 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~~~~~v 428 (526)
..|++|.+|.++|||++ ||++||+|++|||+++.++.++. .++.. ..+ .+.|+|.|+|+.+++++
T Consensus 382 ~~gv~V~~V~~gspA~~aGL~~GDiI~~vng~~v~~~~~l~----------~~l~~-~~~-~v~l~v~R~g~~~~~~l 447 (448)
T 1ky9_A 382 DQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAELR----------KVLDS-KPS-VLALNIQRGDSTIYLLM 447 (448)
T ss_dssp ------------------------------------------------------------------------------
T ss_pred CCeEEEEEecCCCHHHHcCCCCCCEEEEECCEECCCHHHHH----------HHHHc-CCC-eEEEEEEECCEEEEEEe
Confidence 46899999999999999 99999999999999999998875 45544 334 89999999998877654
No 317
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=97.88 E-value=4.6e-06 Score=82.25 Aligned_cols=62 Identities=18% Similarity=0.213 Sum_probs=49.4
Q ss_pred ccceEEEEeCCCCcccC--CCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEECCEE
Q 009784 352 QKGVRIRRVDPTAPESE--VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (526)
Q Consensus 352 ~~Gv~V~~V~~~spA~~--GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~ 423 (526)
..|++|.+|.+++||++ ||++||+|++|||+++.+..... ...++.. .|++|+|+|.|.++.
T Consensus 102 ~~gi~V~~V~~gspA~~~aGL~~GD~Il~VNG~~v~~~t~~e--------~v~~l~~--~g~~V~L~V~R~~~~ 165 (263)
T 1z87_A 102 KMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDE--------AVQALKK--TGKEVVLEVKYMKEV 165 (263)
T ss_dssp TEEEEEEECCTTSHHHHCTTCCSSCEEEEESSCBCTTSCHHH--------HHHHHHH--CCSCCCEEEECCSSS
T ss_pred CCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCcCHHH--------HHHHHhc--CCCeEEEEEEeCccc
Confidence 46899999999999997 89999999999999998864321 1133333 488899999997754
No 318
>3qzr_A 3C protein; chymotrypsin-fold, beta-ribbon, hydrolysis, nucleus, hydrola hydrolase inhibitor complex; HET: AG7; 1.04A {Human enterovirus 71} SCOP: b.47.1.0 PDB: 3osy_A 3qzq_A* 3r0f_A* 3sjo_A* 3sjk_A 3sji_A* 3sj8_A* 3sj9_A
Probab=97.87 E-value=0.0015 Score=60.53 Aligned_cols=147 Identities=14% Similarity=0.148 Sum_probs=93.0
Q ss_pred eEEEEEEEeCCEEEecccccCCCCeEEEEEcCCCcEEEEEE--EEecc---CCCeEEEEecccccccCceeeecCCCCcC
Q 009784 149 SSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGSDTKYLATV--LAIGT---ECDIAMLTVEDDEFWEGVLPVEFGELPAL 223 (526)
Q Consensus 149 ~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~~g~~~~a~v--v~~d~---~~DlAlLkv~~~~~~~~~~pl~l~~~~~~ 223 (526)
+.-||+-|.+.+.|-+.|.-. .+. |.+ +|+.++..- .-.|. ..||++++++..+-+.++... +.+....
T Consensus 27 g~ft~LgI~dr~~vvP~Ha~~-~~~--i~i--~g~~~~v~d~~~L~~~~g~~~Elt~v~l~~~~kfRDIrkf-i~~~~~~ 100 (187)
T 3qzr_A 27 GHFTMLGVRDRLAVLPRHSQP-GKT--IWI--EHKLVNVLDAVELVDEQGVNLALTLITLDTNEKFRDITKF-IPENIST 100 (187)
T ss_dssp EEEEEEEEEBTEEEEEGGGCC-CSE--EEE--TTEEEEEEEEEECCCTTCCCCSEEEEEECSSCCBCCCGGG-SCSSCCC
T ss_pred CeEEEEEEeeeEEEEeCCCCC-CCE--EEE--CCEEEEeeeeEEEECCCCCEEEEEEEEcCCCccccchHHh-CccCcCC
Confidence 345999999999999999943 344 333 677766421 11122 469999999975422333331 2333332
Q ss_pred CCcEEEEeeCCCCCceeEEEEEEeceeeeeccCCceeeeEEEEcccCCCCCCCCeeecCCCeEEEEEeeccccCcccccc
Q 009784 224 QDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIG 303 (526)
Q Consensus 224 g~~V~~iG~p~~~~~~sv~~GiVs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VVGI~~~~~~~~~~~~~~ 303 (526)
...+..+-+........+..|-+...... ...+.....++..+++...|.=||+|+. .|+++||++++. +..|
T Consensus 101 ~~~~~L~~ns~~~~~~~~~vG~v~~~g~i-nlsg~~t~r~l~Y~~pTk~G~CGgvl~~-~gkIiGIHvaGn-----G~~G 173 (187)
T 3qzr_A 101 ASDATLVINTEHMPSMFVPVGDVVQYGFL-NLSGKPTHRTMMYNFPTKAGQCGGVVTS-VGKIIGIHIGGN-----GRQG 173 (187)
T ss_dssp EEEEEEEECCSSSCSEEEEEEEEEEEEEE-EETTEEEEEEEEESSCCCTTCTTCEEEE-TTEEEEEEEEEC-----SSCE
T ss_pred CCceEEEEEcCCCcceEEEeccEEEeceE-eCCCCccccEEEECCCCCCCccCCeEEe-cCcEEEEEECCC-----CCcE
Confidence 23455665555443434555666654433 2233344567899999999999999997 799999999863 4456
Q ss_pred ccccH
Q 009784 304 YVIPT 308 (526)
Q Consensus 304 ~aIP~ 308 (526)
|+.++
T Consensus 174 ~~a~L 178 (187)
T 3qzr_A 174 FCAGL 178 (187)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 66543
No 319
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=97.08 E-value=2e-06 Score=73.81 Aligned_cols=54 Identities=19% Similarity=0.355 Sum_probs=41.4
Q ss_pred cceEEEEeCCCCcccC--CCCCCcEEEEECCEEecC--CCCcccccccchhhhhhhhhcCCCCEEEEEEE
Q 009784 353 KGVRIRRVDPTAPESE--VLKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYLVSQKYTGDSAAVKVL 418 (526)
Q Consensus 353 ~Gv~V~~V~~~spA~~--GL~~GDvIl~vnG~~I~~--~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~ 418 (526)
.|++|.+|.++|||++ ||++||+|++|||+++.+ ..++. ..+. ..+++++|+|.
T Consensus 53 ~gv~V~~V~~~spA~~~aGL~~GD~Il~ING~~v~~~~~~~~~----------~~l~--~~~~~v~l~V~ 110 (112)
T 2lob_A 53 VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAV----------TILS--QQRGEIEFEVV 110 (112)
Confidence 5799999999999997 899999999999999954 45542 3332 24556777664
No 320
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.79 E-value=4.4e-05 Score=88.96 Aligned_cols=67 Identities=15% Similarity=0.194 Sum_probs=55.4
Q ss_pred ccceEEEEeCCC--------CcccC-C--CCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEEC
Q 009784 352 QKGVRIRRVDPT--------APESE-V--LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRD 420 (526)
Q Consensus 352 ~~Gv~V~~V~~~--------spA~~-G--L~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~ 420 (526)
..+++|.+|.++ |||++ | |+ ||+|++|||+++.+..++. .++. ..+|++|+|+|.|+
T Consensus 747 ~~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~~~~----------~~~~-~~~g~~v~l~v~r~ 814 (1045)
T 1k32_A 747 GDHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGSNIY----------RVLS-EKAGTSARIRLSGK 814 (1045)
T ss_dssp TTEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTBCHH----------HHHH-TTTTSEEEEEEECS
T ss_pred CCEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchhhHH----------Hhhc-CCCCCEEEEEEECC
Confidence 367999999987 99999 9 99 9999999999999887653 4444 46899999999998
Q ss_pred C-EEEEEEEEe
Q 009784 421 S-KILNFNITL 430 (526)
Q Consensus 421 G-~~~~~~v~l 430 (526)
| +.++++++.
T Consensus 815 ~~~~~~~~~~~ 825 (1045)
T 1k32_A 815 GGDKRDLMIDI 825 (1045)
T ss_dssp SSCEEEEEEEC
T ss_pred CCceEEEEEEE
Confidence 7 555666664
No 321
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=97.77 E-value=5.1e-05 Score=62.94 Aligned_cols=60 Identities=13% Similarity=0.088 Sum_probs=49.7
Q ss_pred cceEEEEeCCCCcccC--CCCCCcEEEEECCEEecCCCCcccccccchhhhhhhhhcCCCCEEEEEEEEC
Q 009784 353 KGVRIRRVDPTAPESE--VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRD 420 (526)
Q Consensus 353 ~Gv~V~~V~~~spA~~--GL~~GDvIl~vnG~~I~~~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~ 420 (526)
..++|.+|.++++|++ .|+.||.|++|||+.+..+.... ..+++.+...|.+++|++.+-
T Consensus 28 g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~e--------vv~lLk~~~~g~~~~L~lv~p 89 (95)
T 3gge_A 28 GYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYD--------VAKKLKELKKEELFTMKLIEP 89 (95)
T ss_dssp SCCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHH--------HHHHHHHSCTTCEEEEEEEEE
T ss_pred CcEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHH--------HHHHHHhCCCCCEEEEEEECc
Confidence 3478999999999998 59999999999999998775432 336777777899999998874
No 322
>3q3y_A HEVB EV93 3C protease; cysteine trypsin-like protease, 3C cysteine protease (picorn antiviral compound 1 (AG7404); HET: XNV; 1.32A {Human enterovirus B} SCOP: b.47.1.4 PDB: 3q3x_A* 3ruo_A* 3zyd_A 3zz5_A* 3zz6_A* 3zz7_A* 3zz8_A* 3zz9_A* 3zza_A* 3zzb_A* 2ztx_A 2vb0_A 2zty_A 2ztz_A 2zu3_A* 3zye_A 3zz3_A 2zu1_A 3zz4_A 3zzc_A* ...
Probab=97.74 E-value=0.0027 Score=58.84 Aligned_cols=146 Identities=13% Similarity=0.159 Sum_probs=92.2
Q ss_pred eEEEEEEEeCCEEEecccccCCCCeEEEEEcCCCcEEEEE--EEEecc---CCCeEEEEecccccccCceeeecCCCCcC
Q 009784 149 SSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGSDTKYLAT--VLAIGT---ECDIAMLTVEDDEFWEGVLPVEFGELPAL 223 (526)
Q Consensus 149 ~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~~g~~~~a~--vv~~d~---~~DlAlLkv~~~~~~~~~~pl~l~~~~~~ 223 (526)
+.-||+-|-+..+|-+.|.-. .+. |.+ +|+.++.. ..-.|. ..||++|+++..+-+.++.. -+.+....
T Consensus 25 G~ft~LgI~dr~~vvPtHa~~-~~~--i~i--~G~~~~v~d~~~L~~~~g~~lElt~v~l~~~~kFRDIrk-fi~~~~~~ 98 (191)
T 3q3y_A 25 GEFTMLGIYDRWAVLPRHAKP-GPT--ILM--NDQEVGVLDAKELVDKDGTNLELTLLKLNRNEKFRDIRG-FLAREEVE 98 (191)
T ss_dssp EEEEEEEEEBTEEEEEGGGCC-CSE--EEE--TTEEEEEEEEEEEECTTCCEEEEEEEEEECSSCBCCCGG-GBCSSCCC
T ss_pred CcEEEEEEeceEEEEECCCCC-CCE--EEE--CCEEEEeeeEEEEEcCCCCEEEEEEEECCCCccccchHH-hccccccc
Confidence 345899999999999999943 344 444 67777641 111232 35999999997653233333 13333333
Q ss_pred CCcEEEEeeCCCCCceeEEEEEEeceeeeeccCCceeeeEEEEcccCCCCCCCCeeecCCCeEEEEEeeccccCcccccc
Q 009784 224 QDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIG 303 (526)
Q Consensus 224 g~~V~~iG~p~~~~~~sv~~GiVs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VVGI~~~~~~~~~~~~~~ 303 (526)
......+.+........+..|-+....... ..+.....++..+++...|.=||+|+. .|+++||++++ ++..|
T Consensus 99 ~~~~~Lv~ns~~~p~~~~~vG~v~~~g~in-lsg~~t~r~l~Y~~pTk~G~CGgvL~~-~gkIiGIHvgG-----nG~~G 171 (191)
T 3q3y_A 99 VNEAVLAINTSKFPNMYIPVGQVTDYGFLN-LGGTPTKRMLVYNFPTRAGQCGGVLMS-TGKVLGIHVGG-----NGHQG 171 (191)
T ss_dssp EEEEEEEECSSSSTTEEEEEEEEEEEEEEE-ETTEEEEEEEEEESCCCTTCTTCEEEE-TTEEEEEEEEE-----ETTEE
T ss_pred CCceEEEEEcCCCcceEEEeccEEEcceEe-CCCCcccCEEEecCCCCCCccCCEEEe-CCCEEEEEECC-----CCcce
Confidence 334455555544443345556666544322 233344567899999999999999987 79999999985 34556
Q ss_pred cccc
Q 009784 304 YVIP 307 (526)
Q Consensus 304 ~aIP 307 (526)
|+.+
T Consensus 172 faa~ 175 (191)
T 3q3y_A 172 FSAA 175 (191)
T ss_dssp EEEE
T ss_pred EEee
Confidence 6654
No 323
>2b0f_A Picornain 3C (protease 3C) (P3C); beta barrel, hydrolase-hydrolase inhibitor complex; HET: CA1; NMR {Human rhinovirus 14} PDB: 2in2_A
Probab=97.70 E-value=0.0025 Score=59.03 Aligned_cols=144 Identities=16% Similarity=0.193 Sum_probs=89.1
Q ss_pred EEEEEEeCCEEEecccccCCCCeEEEEEcCCCcEEEE--EEEEec---cCCCeEEEEecccccccCceeeecCCCCcCCC
Q 009784 151 SSGFAIGGRRVLTNAHSVEHYTQVKLKKRGSDTKYLA--TVLAIG---TECDIAMLTVEDDEFWEGVLPVEFGELPALQD 225 (526)
Q Consensus 151 GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~~g~~~~a--~vv~~d---~~~DlAlLkv~~~~~~~~~~pl~l~~~~~~g~ 225 (526)
-||+-|.+.+.|..+|...+ + ++.+ +|+.+.. ...-.| -..||++|+++..+-+.++... +.+.....
T Consensus 25 ~t~LgI~d~~~vvP~Ha~~~-~--~i~i--~g~~~~v~d~~~l~~~~~~~~eltlv~l~~~~kfRDIrkf-i~~~~~~~- 97 (182)
T 2b0f_A 25 FTGLGIHDRVCVIPTHAQPG-D--DVLV--NGQKIRVKDKYKLVDPENINLELTVLTLDRNEKFRDIRGF-ISEDLEGV- 97 (182)
T ss_dssp EEEEEEEBTEEEEESTTCCC-S--EEEE--TTEEEEEEEEEEEEETTTEEEEEEEEEECCSSCBCCGGGT-BCSSCCCS-
T ss_pred EEEEEEeeeEEEEecCCCCc-c--EEEE--CCEEEEeeeeeEEEcCCCCeeEEEEEECCCcccccchHHh-cCCCCCCC-
Confidence 48899999999999999765 3 3344 4654321 222223 2589999999876533333331 22222212
Q ss_pred cEEEEeeCCCCCceeEEEEEEeceeeeeccCCceeeeEEEEcccCCCCCCCCeeecCCCeEEEEEeeccccCcccccccc
Q 009784 226 AVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYV 305 (526)
Q Consensus 226 ~V~~iG~p~~~~~~sv~~GiVs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VVGI~~~~~~~~~~~~~~~a 305 (526)
+...+-+........+..|-+....... ..+.....++..+++...|.=||||+. +|+++||++++ ++..||+
T Consensus 98 ~~~lv~n~~~~p~~~~~vg~~~~~g~i~-l~G~~t~~~~~Y~~pTk~G~CGgvl~~-~gkIlGIHvaG-----~G~~Gfa 170 (182)
T 2b0f_A 98 DATLVVHSNNFTNTILEVGPVTMAGLIN-LSSTPTNRMIRYDYATKTGQCGGVLCA-TGKIFGIHVGG-----NGRQGFS 170 (182)
T ss_dssp EEEEEEESSSCEEEEEEEEEEEEEEEEE-ETTEEEEEEEEEESCCCTTCTTCEEEE-TTEEEEEEEEE-----ETTEEEE
T ss_pred ceEEEEEcCCCceEEEEecceEEeceEc-CCCcEecceEEeccCCCCcccCCeEEe-CCCEEEEEeCC-----CCCceEe
Confidence 4333334433333234566665544332 334445567889999999999999997 78999999996 3556777
Q ss_pred ccH
Q 009784 306 IPT 308 (526)
Q Consensus 306 IP~ 308 (526)
.++
T Consensus 171 a~l 173 (182)
T 2b0f_A 171 AQL 173 (182)
T ss_dssp EEC
T ss_pred hhh
Confidence 554
No 324
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=97.59 E-value=6.5e-06 Score=75.31 Aligned_cols=32 Identities=13% Similarity=0.178 Sum_probs=30.4
Q ss_pred EEEEeCCCCcccC-CCCCCcEEEEECCEEecCC
Q 009784 356 RIRRVDPTAPESE-VLKPSDIILSFDGIDIAND 387 (526)
Q Consensus 356 ~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~ 387 (526)
+|..|.++|||++ ||++||+|++|||+++.++
T Consensus 110 ~v~~v~~~s~a~~aGl~~GD~I~~ing~~v~~~ 142 (166)
T 1w9e_A 110 KITSIVKDSSAARNGLLTEHNICEINGQNVIGL 142 (166)
T ss_dssp EEEEECTTSHHHHTTCCSSEEEEEETTEECTTC
T ss_pred EEEEEccCCHHHHcCCCCCCEEEEECCEECCCC
Confidence 7899999999999 9999999999999999876
No 325
>1cqq_A Type 2 rhinovirus 3C protease; viral protein, hydrolase; HET: AG7; 1.85A {Human rhinovirus 2} SCOP: b.47.1.4 PDB: 2xya_A*
Probab=97.55 E-value=0.0046 Score=57.22 Aligned_cols=146 Identities=13% Similarity=0.144 Sum_probs=87.8
Q ss_pred eEEEEEEEeCCEEEecccccCCCCeEEEEEcCCCcEEEEE--EEEecc---CCCeEEEEecccccccCceeeecCCCCcC
Q 009784 149 SSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGSDTKYLAT--VLAIGT---ECDIAMLTVEDDEFWEGVLPVEFGELPAL 223 (526)
Q Consensus 149 ~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~~g~~~~a~--vv~~d~---~~DlAlLkv~~~~~~~~~~pl~l~~~~~~ 223 (526)
+..++.-|.+.++|...|...+. .+.+ +|+.++-. ...+|+ ..||++++++..+-..++.. -+.+....
T Consensus 23 g~~t~Lgi~~~~~lvP~Ha~~~~---~i~i--~g~~v~i~d~~~l~d~~g~~~El~lv~l~~~~kfrDi~k-fip~~~~~ 96 (180)
T 1cqq_A 23 GKFTGLGVYDRFVVVPTHADPGK---EIQV--DGITTKVIDSYDLYNKNGIKLEITVLKLDRNEKFRDIRR-YIPNNEDD 96 (180)
T ss_dssp EEEEEEEEEBTEEEEEGGGCCCS---EEEE--TTEEEEEEEEEEEECTTSCEEEEEEEEECSSCCBCCGGG-GSCSSCCC
T ss_pred CcEEEEEEeeEEEEEccCcCccc---EEEE--CCEEEEeccceEEEcCCCCeEEEEEEEcCCccccCccHh-hcCCCcCC
Confidence 34788999999999999998874 3444 45554322 223343 36999999987642223332 12222221
Q ss_pred CCcEEEEeeCCCCCceeEEEEEEeceeeeeccCCceeeeEEEEcccCCCCCCCCeeecCCCeEEEEEeeccccCcccccc
Q 009784 224 QDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIG 303 (526)
Q Consensus 224 g~~V~~iG~p~~~~~~sv~~GiVs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VVGI~~~~~~~~~~~~~~ 303 (526)
....+.+-+-.......+..|-+....... ..+.....++..+++..+|+=||+|+. +|+++||++++. +..|
T Consensus 97 ~~~~~l~~n~~~~~~~~v~~g~~~~~g~i~-~~g~~~~r~l~Y~~pT~~G~CGsvl~~-~gkIiGIHvAG~-----G~~G 169 (180)
T 1cqq_A 97 YPNCNLALLANQPEPTIINVGDVVSYGNIL-LSGNQTARMLKYSYPTKSGYCGGVLYK-IGQVLGIHVGGN-----GRDG 169 (180)
T ss_dssp EEEEEEEECTTSSSCEEEEEEEEEECCCEE-ETTEEECSEEEECCCCCTTCTTCEEEE-TTEEEEEEEEEC-----SSCE
T ss_pred CCceEEEEEcCCCceEEEEccceeeeeeEe-cCCcEeccEEEecCCCCCCcCCCeEEE-CCCEEEEEECCC-----CCcE
Confidence 223444443333333235555555433222 123333457899999999999999997 479999999863 4566
Q ss_pred cccc
Q 009784 304 YVIP 307 (526)
Q Consensus 304 ~aIP 307 (526)
|+.+
T Consensus 170 ~aa~ 173 (180)
T 1cqq_A 170 FSAM 173 (180)
T ss_dssp EEEE
T ss_pred EEee
Confidence 6654
No 326
>4dcd_A Protease 3C, genome polyprotein; antiviral inhibitors, dipeptidyl inhib hydrolase-hydrolase inhibitor complex; HET: K36; 1.69A {Human poliovirus 1} PDB: 1l1n_A
Probab=97.54 E-value=0.0067 Score=56.35 Aligned_cols=146 Identities=12% Similarity=0.157 Sum_probs=87.9
Q ss_pred eEEEEEEEeCCEEEecccccCCCCeEEEEEcCCCcEEEEE--EEEecc---CCCeEEEEecccccccCceeeecCCCCcC
Q 009784 149 SSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGSDTKYLAT--VLAIGT---ECDIAMLTVEDDEFWEGVLPVEFGELPAL 223 (526)
Q Consensus 149 ~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~~g~~~~a~--vv~~d~---~~DlAlLkv~~~~~~~~~~pl~l~~~~~~ 223 (526)
+..||.-|.+.+.|-..|.-. .+.+ .+ +|+.++.. ..-.|. ..||++|+++..+-+.++... |.+...-
T Consensus 30 G~ft~LgI~d~~~viP~Ha~p-~~~i--~i--~G~~~~v~d~~~l~~~~gv~lElt~V~l~r~~kFRDIr~f-i~~~~~~ 103 (190)
T 4dcd_A 30 GEFTMLGVHDNVAILPTHASP-GESI--VI--DGKEVEILDAKALEDQAGTNLEITIITLKRNEKFRDIRPH-IPTQITE 103 (190)
T ss_dssp EEEEEEEEEBTEEEEEGGGCC-CSEE--EE--TTEEEEEEEEEEEECTTCCEEEEEEEEESSSCCBCCCGGG-SCSSCCC
T ss_pred eEEEEEEEECcEEEEeCCCCC-CcEE--EE--CCEEEEeeEEEEEecCCCCeEEEEEEEcCCCccccchhHh-ccccCCC
Confidence 457899999999999999543 3433 34 56665432 112333 369999999986532333321 2222222
Q ss_pred CCcEEEEeeCCCCCceeEEEEEEeceeeeeccCCceeeeEEEEcccCCCCCCCCeeecCCCeEEEEEeeccccCcccccc
Q 009784 224 QDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIG 303 (526)
Q Consensus 224 g~~V~~iG~p~~~~~~sv~~GiVs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VVGI~~~~~~~~~~~~~~ 303 (526)
..++..+=+........+..|.+....... ..+.....++..+++..+|.=||||+. +|+++||+.++. +..|
T Consensus 104 ~~~~~L~vn~~~~~~~~~~vg~v~~~g~i~-lsg~~t~r~l~Y~~pT~~G~CGg~l~~-~gkIlGIHvaG~-----G~~G 176 (190)
T 4dcd_A 104 TNDGVLIVNTSKYPNMYVPVGAVTEQGYLN-LGGRQTARTLMYNFPTRAGQCGGVITC-TGKVIGMHVGGN-----GSHG 176 (190)
T ss_dssp EEEEEEEECSSSSTTEEEEEEEEEEEEEEE-ETTEEEEEEEEESSCCCTTCTTCEEEE-TTEEEEEEEEEC-----SSCE
T ss_pred CCceEEEEecCCCccEEEEeeeeEEecccc-CCCCcccceEEEccCCCCCccCCEEEe-CCCEEEEEECCC-----CCce
Confidence 223333323223333234455555444332 234455568899999999999999996 789999999963 4456
Q ss_pred cccc
Q 009784 304 YVIP 307 (526)
Q Consensus 304 ~aIP 307 (526)
|+-+
T Consensus 177 ~aa~ 180 (190)
T 4dcd_A 177 FAAA 180 (190)
T ss_dssp EEEE
T ss_pred Eeee
Confidence 6644
No 327
>3zve_A 3C protease; hydrolase, michael inhibitor; HET: G84; 1.80A {Human enterovirus} PDB: 3zv8_A* 3zva_A* 3zvb_A* 3zv9_A* 3zvd_A* 3zvc_A* 3zvf_A* 3zvg_A*
Probab=97.53 E-value=0.005 Score=57.46 Aligned_cols=146 Identities=14% Similarity=0.194 Sum_probs=87.1
Q ss_pred eEEEEEEEeCCEEEecccccCCCCeEEEEEcCCCcEEEEE--EEEecc---CCCeEEEEecccccccCceeeecCCCC-c
Q 009784 149 SSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGSDTKYLAT--VLAIGT---ECDIAMLTVEDDEFWEGVLPVEFGELP-A 222 (526)
Q Consensus 149 ~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~~g~~~~a~--vv~~d~---~~DlAlLkv~~~~~~~~~~pl~l~~~~-~ 222 (526)
+.-||..|.+.++|.++|...+ + ++.. +|+.+... ....|. ..||++++++..+-+.++... |.+.. .
T Consensus 23 G~ft~LgI~dr~~lvP~Ha~~~-~--ti~i--~g~~~~v~d~~~l~~~~~~~~Dlt~v~l~~~~kFRDIr~~-~~~~~~~ 96 (190)
T 3zve_A 23 GEFTMLGVHDRVAVIPTHASVG-E--TIYI--NDVETKVLDACALRDLTDTNLEITIVKLDRNQKFRDIRHF-LPRYEDD 96 (190)
T ss_dssp EEEEEEEEEBTEEEEEGGGCCC-S--EEEE--TTEEEEEEEEEEEECTTCCEEEEEEEEECCSSCBCCCGGG-SCSSCCC
T ss_pred EEEEEEEEeCCEEEEecCCCCC-c--EEEE--CCEEEEeeEEEEEEcCCCCeEEEEEEEcCCCcccCchHHh-ccccCCC
Confidence 4568898999999999997643 2 3333 45544321 112233 359999999876422333221 33222 2
Q ss_pred CCCcEEEEeeCCCCCceeEEEEEEeceeeeeccCCceeeeEEEEcccCCCCCCCCeeecCCCeEEEEEeeccccCccccc
Q 009784 223 LQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENI 302 (526)
Q Consensus 223 ~g~~V~~iG~p~~~~~~sv~~GiVs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VVGI~~~~~~~~~~~~~ 302 (526)
..+.+.++-.+. .....+..|.+....... ..+.....++..+++..+|+=||||+. +|+++||+.++. +..
T Consensus 97 ~~~~~l~i~s~~-~~~~~~~v~~v~~~~~i~-l~g~~~~~~~~Y~~pT~~G~CG~~li~-~gkI~GiHvaG~-----G~~ 168 (190)
T 3zve_A 97 YNDAVLSVHTSK-FPNMYIPVGQVTNYGFLN-LGGTPTHRILMYNFPTRAGQCGGVVTT-TGKVIGIHVGGN-----GAQ 168 (190)
T ss_dssp EEEEEEEECSSS-CSSEEEEEEEEEEEEEEE-ETTEEEEEEEEESSCCCTTCTTCEEEE-TTEEEEEEEEEC-----SSC
T ss_pred CCCeEEEEECCC-CcceEEecccceEeceee-cCCCeeeeeEEEecCCCCCccCCeEEE-CCCEEEEEECcC-----CCc
Confidence 233344443332 233234555555444322 234444567889999999999999996 799999999863 345
Q ss_pred cccccH
Q 009784 303 GYVIPT 308 (526)
Q Consensus 303 ~~aIP~ 308 (526)
||+-++
T Consensus 169 g~~~~l 174 (190)
T 3zve_A 169 GFAAML 174 (190)
T ss_dssp EEEEEC
T ss_pred eEehhh
Confidence 676553
No 328
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=97.40 E-value=0.00024 Score=76.74 Aligned_cols=83 Identities=14% Similarity=0.142 Sum_probs=62.9
Q ss_pred cccCceeeeccChhHHhhhcCC-----------------CCccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecCCCC
Q 009784 328 PLLGVEWQKMENPDLRVAMSMK-----------------ADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGT 389 (526)
Q Consensus 328 ~~LGi~~~~~~~~~~~~~lgl~-----------------~~~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~~~~ 389 (526)
.+.|+.+.++ +..+.+.++.. ...+|++|.+|.+++++.. |+++||+|++|||++|.|..+
T Consensus 374 ~~~Gl~f~~L-t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gVvvs~V~~~s~a~~~g~~~gdiI~~vNg~~V~s~~~ 452 (539)
T 4fln_A 374 IVAGLVFTPL-SEPLIEEECEDTIGLKLLTKARYSVARFRGEQIVILSQVLANEVNIGYEDMNNQQVLKFNGIPIRNIHH 452 (539)
T ss_dssp CSTTEEEEEC-CHHHHTTSCSSSSCHHHHHHHHHCCCSSTTCCCEEEEEECCCGGGTTCSSCCSEEEEEETTEECCSHHH
T ss_pred cccceEEeeC-CHHHHHhhcccccCceeeehhhhhhhccCCceEEEEEEecCCchhhhcCCCCCCEEEeECCEEcCCHHH
Confidence 3578999888 66555443322 2356999999999999999 999999999999999999998
Q ss_pred cccccccchhhhhhhhhcCCCCEEEEEEEECCEE
Q 009784 390 VPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (526)
Q Consensus 390 l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G~~ 423 (526)
|. +++.. ..++.+.|++. +|+.
T Consensus 453 l~----------~~l~~-~k~~~l~~~~~-~~~~ 474 (539)
T 4fln_A 453 LA----------HLIDM-CKDKYLVFEFE-DNYV 474 (539)
T ss_dssp HH----------HHHHT-CCSSEEEEEET-TSCE
T ss_pred HH----------HHHHH-cCCCeEEEEEC-CCEE
Confidence 74 55554 45777777753 4544
No 329
>2pka_A Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_A 1hia_A
Probab=97.33 E-value=0.00041 Score=55.11 Aligned_cols=45 Identities=24% Similarity=0.235 Sum_probs=32.2
Q ss_pred eeCCCCCCccccCCC--cceEEEEEEEeCCEEEecccccCCCCeEEEEE
Q 009784 132 HTEPNFSLPWQRKRQ--YSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKK 178 (526)
Q Consensus 132 ~~~~~~~~P~~~~~~--~~~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~ 178 (526)
......++||+.... ....|.|.+|++.+|||+|||+.+.. .|.+
T Consensus 5 ~~a~~~~~Pw~v~l~~~~~~~CgGslIs~~~VLTAAHC~~~~~--~v~~ 51 (80)
T 2pka_A 5 RECEKNSHPWQVAIYHYSSFQCGGVLVNPKWVLTAAHCKNDNY--EVWL 51 (80)
T ss_dssp EECCTTSCTTEEEEEETTEEEEEEEEEETTEEEECGGGCCSCC--EEEE
T ss_pred EECCCCCCCcEEEEEECCceEEEEEEEcCCEEEECHHHCCCCc--EEEE
Confidence 344556678866432 23579999999999999999997643 3444
No 330
>2hal_A Hepatitis A protease 3C; 3C protease, inhibitor design; HET: BBL; 1.35A {Hepatitis a virus} SCOP: b.47.1.4 PDB: 2h6m_A* 2h9h_A* 2cxv_A* 2a4o_A* 1hav_A 1qa7_A*
Probab=97.30 E-value=0.0068 Score=57.64 Aligned_cols=164 Identities=13% Similarity=0.146 Sum_probs=92.2
Q ss_pred CeEEEEeeeeCCCCCCccccCCCcceEEEEEEEeCCEEEecccccCCCC-----eEEEEEcCCCcEEEEE-----EEEec
Q 009784 124 AVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFAIGGRRVLTNAHSVEHYT-----QVKLKKRGSDTKYLAT-----VLAIG 193 (526)
Q Consensus 124 SVV~I~~~~~~~~~~~P~~~~~~~~~~GSGfvI~~g~ILT~aHvV~~~~-----~i~V~~~~~g~~~~a~-----vv~~d 193 (526)
..|+|...... ......++|+.|.+.++|...|...... .-.+.. +|+.|... +...|
T Consensus 12 N~~~i~~~~~~----------~~~~~~~t~LgI~~r~~lvP~H~~~~~~~~~~~~~~i~i--~g~~~~~~~~~v~~~~~d 79 (212)
T 2hal_A 12 NLVQFGVGEKN----------GSVRWVMNALGVKDDWLLVPSHAYKFEKDYEMMEFYFNR--GGTYYSISAGNVVIQSLD 79 (212)
T ss_dssp HEEEEEEEETT----------SCCEEEEEEEEEEBTEEEEEGGGTTTSTTGGGEEEEEEE--TTEEEEEEGGGSEEECSS
T ss_pred cEEEEEEeCCC----------CCcceEEEEEEEcCCEEEEecccCcccccccccceEEEE--CCEEEeeccccceeEecc
Confidence 66777765411 1222468999999999999999975221 224444 56666543 33333
Q ss_pred -cCCCeEEEEecccccccCceeeecCC---CCcCCC-cEEEEeeCCCCCceeEEEE------EEeceeeeeccCCceee-
Q 009784 194 -TECDIAMLTVEDDEFWEGVLPVEFGE---LPALQD-AVTVVGYPIGGDTISVTSG------VVSRIEILSYVHGSTEL- 261 (526)
Q Consensus 194 -~~~DlAlLkv~~~~~~~~~~pl~l~~---~~~~g~-~V~~iG~p~~~~~~sv~~G------iVs~~~~~~~~~~~~~~- 261 (526)
...||++++++...-+.++... |.+ .+..++ .+.+++...+.. ..+..| .++... ....+....
T Consensus 80 ~~~~Dl~lv~Lp~~~~FrDIrk~-f~~~~~~~~~~~~~~lv~~~~~~~~-~~~~~~~~~~~~~~~~~~--i~~~G~~~~~ 155 (212)
T 2hal_A 80 VGFQDVVLMKVPTIPKFRDITQH-FIKKGDVPRALNRLATLVTTVNGTP-MLISEGPLKMEEKATYVH--KKNDGTTVDL 155 (212)
T ss_dssp SSCCSEEEEECTTSCCBCCCGGG-BCCGGGGGGTTTSCEEEEEEETTEE-EEEEECSCEEEEEEEEEE--ECTTSCEEEE
T ss_pred CCCceEEEEECCCCCccCChhHh-cCCcccccccccceEEEEeccCCCc-eEEecccccccceeeEEE--ecCCCccccc
Confidence 4689999999764322233321 211 122233 334443222211 111111 111000 011222222
Q ss_pred ---eEEEEcccCCCCCCCCeeecC----CCeEEEEEeeccccCccccccccccH
Q 009784 262 ---LGLQIDAAINSGNSGGPAFND----KGKCVGIAFQSLKHEDVENIGYVIPT 308 (526)
Q Consensus 262 ---~~i~~da~i~~G~SGGPlvn~----~G~VVGI~~~~~~~~~~~~~~~aIP~ 308 (526)
.++..+++..+|+=||||+.. .|+++||+.++. .+.|||.++
T Consensus 156 ~~~~~~~Y~~pT~~G~CGs~li~~~~~~~~kIiGiHvaG~-----g~~G~a~~l 204 (212)
T 2hal_A 156 TVDQAWRGKGEGLPGMCGGALVSSNQSIQNAILGIHVAGG-----NSILVAKLV 204 (212)
T ss_dssp EEEEEEEEECCCCTTCTTCEEEESCGGGTTCEEEEEEEEE-----TTEEEEEEC
T ss_pred ccceEEEEecCCCCCcCCCeEEEccCCCCceEEEEEeCcC-----CCcEEEEee
Confidence 468889999999999999874 799999999964 346777664
No 331
>2bhg_A Foot-and-mouth disease virus 3C protease; chymotrypsin-like cysteine protease, capsid protein, core protein; 1.9A {Foot-and-mouth disease virus} SCOP: b.47.1.4 PDB: 2j92_A 2wv4_A 2wv5_A
Probab=97.05 E-value=0.012 Score=55.88 Aligned_cols=156 Identities=15% Similarity=0.149 Sum_probs=90.3
Q ss_pred EEEEEEEeCCEEEecccccCCCCeEEEEEcCCCcEEE---EEEE----EeccC---CCeEEEEecccccccCceeeecCC
Q 009784 150 SSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGSDTKYL---ATVL----AIGTE---CDIAMLTVEDDEFWEGVLPVEFGE 219 (526)
Q Consensus 150 ~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~~g~~~~---a~vv----~~d~~---~DlAlLkv~~~~~~~~~~pl~l~~ 219 (526)
..+|..|.+.++|...|...+... .+.+ +++.+. .++. .+|.. .||++++++...-+.++... |.+
T Consensus 31 ~~~~LgI~~r~~l~P~H~~~~~~~-~i~i--~g~~~~~~~~~~~~~e~~v~~~~~~~Dl~~~~l~~~~kfrdi~k~-f~~ 106 (209)
T 2bhg_A 31 ICCATGVFGTAYLVPRHLFAEKYD-KIML--DGRAMTDSDYRVFEFEIKVKGQDMLSDAALMVLHRGNKVRDITKH-FRD 106 (209)
T ss_dssp EEEEEEEEBTEEEEEHHHHTSCCS-EEEE--TTEEECGGGEEEECCEECCSSSCEECSEEEEEESSSCCBCCCGGG-BCS
T ss_pred EEEEeeEcCCEEEEEcccCCCCCc-EEEE--cCEEEEeeeeEEeeceeeecCCCCceeEEEEECCCCcccCchhhh-ccc
Confidence 567788999999999999876322 3444 344442 2222 23433 89999999865422222221 233
Q ss_pred CCc-CC-CcEEEEeeCCCCCceeEEEEEEeceee-eeccCCceeeeEEEEcccCCCCCCCCeeecC---CCeEEEEEeec
Q 009784 220 LPA-LQ-DAVTVVGYPIGGDTISVTSGVVSRIEI-LSYVHGSTELLGLQIDAAINSGNSGGPAFND---KGKCVGIAFQS 293 (526)
Q Consensus 220 ~~~-~g-~~V~~iG~p~~~~~~sv~~GiVs~~~~-~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~---~G~VVGI~~~~ 293 (526)
... .. +.+..+-++..... ....|.+..... .....+.....++..+++..+|+=||+|+.. .|+++||++++
T Consensus 107 ~~~~~~~~~~~~~~n~~~~~~-~~~~g~~~~~~~~~~~~~G~~~~~~~~Y~~pT~~G~CGs~lv~~~~~~~kIvGIHvaG 185 (209)
T 2bhg_A 107 TARMKKGTPVVGVVNNADVGR-LIFSGEALTYKDIVVSMDGDTMPGLFAYKAATRAGYAGGAVLAKDGADTFIVGTHSAG 185 (209)
T ss_dssp SCEECTTCEEEEEEEETTTEE-EEEEEEESSCEECCC-----CCTTEEEEECCCCTTCTTCEEEEEETTEEEEEEEEEEE
T ss_pred ccccCCCCeEEEEeccCccCc-eeeeeeEEEccceeeecCCCccccEEEEcCCCCCCcCCCEEEEecCCCceEEEEEEcc
Confidence 222 23 44776777664322 333554443332 1112222233468899999999999998643 78999999996
Q ss_pred cccCcccccccc--ccHHHHHHHH
Q 009784 294 LKHEDVENIGYV--IPTPVIMHFI 315 (526)
Q Consensus 294 ~~~~~~~~~~~a--IP~~~i~~~l 315 (526)
. ++.||| |+=+.+..+.
T Consensus 186 ~-----g~~G~aa~l~r~~~~~~~ 204 (209)
T 2bhg_A 186 G-----NGVGYCSCVSRSMLQKMK 204 (209)
T ss_dssp E-----TTEEEEEECCHHHHHHHH
T ss_pred C-----CCceEEEEcCHHHHHHHH
Confidence 3 344555 5545554444
No 332
>2ijd_1 Picornain 3C, RNA-directed RNA polymerase; RNA-dependent RNA polymerase, picornavirus, protease, hydrolase, transferase; 3.40A {Human poliovirus 1} SCOP: b.47.1.4 e.8.1.4
Probab=96.68 E-value=0.04 Score=60.87 Aligned_cols=138 Identities=12% Similarity=0.164 Sum_probs=78.7
Q ss_pred eEEEEEEEeCCEEEecccccCCCCeEEEEEcCCCcEEEE--EEEEecc---CCCeEEEEecccccccCceeeecCCCCcC
Q 009784 149 SSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGSDTKYLA--TVLAIGT---ECDIAMLTVEDDEFWEGVLPVEFGELPAL 223 (526)
Q Consensus 149 ~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~~g~~~~a--~vv~~d~---~~DlAlLkv~~~~~~~~~~pl~l~~~~~~ 223 (526)
+.-+|..|.+.++|++.|...+. .+.+ +|..+.- ....+|. ..||++++++...-..++.. -+.+....
T Consensus 23 ~~~~~l~i~~~~~l~p~H~~~~~---~~~i--~g~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~frdi~~-~~~~~~~~ 96 (644)
T 2ijd_1 23 GEFTMLGVHDNVAILPTHASPGE---SIVI--DGKEVAILAAKALADQAGTNLEITIITLKRNEKFRDIRP-HIPTQITE 96 (644)
T ss_dssp EEEEEEEEEBTEEEEEGGGCCCS---EEEE--TTEEEEEEECCEEECTTSCEEEEEEEEECSSCCBCCCGG-GSCSSCCC
T ss_pred cEEEEEEEeceEEEEccccCCCc---eEEE--CCEEEEeccceeEEcCCCCceeEEEEECCCCCCcCChHH-hccCCccC
Confidence 34578888999999999988643 3333 2333321 1123344 36999999975431122222 12222222
Q ss_pred CCcEEEEeeCCCCCceeEEEEEEeceeeeeccCCceeeeEEEEcccCCCCCCCCeeecCCCeEEEEEeecc
Q 009784 224 QDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSL 294 (526)
Q Consensus 224 g~~V~~iG~p~~~~~~sv~~GiVs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VVGI~~~~~ 294 (526)
.....++-...+.....+..|.+....... ..+.....++..+++..+|+=||+|+. .|+||||++++.
T Consensus 97 ~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~-~~g~~~~~~~~y~~~T~~G~CG~~l~~-~gkIvGiHvaG~ 165 (644)
T 2ijd_1 97 TNDGVLIVNTSKYPNMYVPVGAVTEQGYLN-LGGRQTARTLMYNFPTRAGQAGGVITC-TGKVIGMHVGGN 165 (644)
T ss_dssp EEEEEEEECSSSSTTEEEEEEEEEEEEEEC-CTTSCEEEEEEECSCCCTTCTTCEEEE-TTEEEEEEEEEC
T ss_pred CCceEEEEcCCCCceEEEEeeeeeecccee-cCCCccccEEEEcCCCCCCCCCchhhh-CCcEEEEEEcCC
Confidence 222323222222232233456655433221 233344457889999999999999886 799999999873
No 333
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=96.48 E-value=0.00044 Score=71.99 Aligned_cols=63 Identities=8% Similarity=0.114 Sum_probs=0.0
Q ss_pred hhcCCCCccceEEEEeCCCCcccC-CCCCCcEEEEECCEEecC--CCCcccccccchhhhhhhhhcCCCCEEEEEEEECC
Q 009784 345 AMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDS 421 (526)
Q Consensus 345 ~lgl~~~~~Gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~I~~--~~~l~~~~~~~~~~~~~l~~~~~G~~v~l~v~R~G 421 (526)
.+|+.. .+.+|.+|.++|||++ ||++||+|++|||++|.+ ..++. ..+.. .++.+.|+|.+..
T Consensus 309 ~lG~~i--~~g~I~~V~~gs~A~~aGL~~GD~Il~VNg~~v~~~s~~~~~----------~~l~~--~~~~v~L~V~p~~ 374 (388)
T 3suz_A 309 QLGFSV--QNGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATAHEKIV----------QALSN--SVGEIHMKTMPAA 374 (388)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccceEE--ecCEEEEeecCCHHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HHHHh--CCCeEEEEEEecc
Confidence 455542 2347889999999999 999999999999999974 44442 33332 4677888877654
No 334
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=94.69 E-value=0.018 Score=49.76 Aligned_cols=75 Identities=12% Similarity=0.013 Sum_probs=52.4
Q ss_pred cCCCCEEEEEEEECCEEEEEEEEecccccccCCCCCCCCCceEEEeeEEEEeccccceeeeeeeecc--hhhhccccccc
Q 009784 407 KYTGDSAAVKVLRDSKILNFNITLATHRRLIPSHNKGRPPSYYIIAGFVFSRCLYLISVLSMERIMN--MKLRSSFWTSS 484 (526)
Q Consensus 407 ~~~G~~v~l~v~R~G~~~~~~v~l~~~~~~~p~~~~~~~p~~~i~gG~~f~~lt~~~~~~~~~~i~~--~~~~sg~~~~~ 484 (526)
..+|++++++|+|+|+.+++++++.... . .|+.+.........+.+..+.+ .+.++||+.||
T Consensus 5 ~~~g~~v~l~v~R~g~~~~v~v~~~~~~------------~----lG~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD 68 (128)
T 1uf1_A 5 SSGDRRSTLHLLQGGDEKKVNLVLGDGR------------S----LGLTIRGGAEYGLGIYITGVDPGSEAEGSGLKVGD 68 (128)
T ss_dssp CSTTTSCCSCCCCCSSEEEEEEECCSSC------------C----CCEEEECCTTTTCCCEEEEECTTCHHHHHTCCTTC
T ss_pred CCCCCEEEEEEEeCCcEEEEEEEECCCC------------c----cCEEEECcccCCCCEEEEEECCCCHHHHCCCCCCC
Confidence 4589999999999999999998875420 1 1555544322223455666655 45789999999
Q ss_pred eeeeecccchhhh
Q 009784 485 CIQCHNCQMSSLL 497 (526)
Q Consensus 485 ~~~~~~~~~~~~~ 497 (526)
+|...|.+-....
T Consensus 69 ~I~~vng~~v~~~ 81 (128)
T 1uf1_A 69 QILEVNGRSFLNI 81 (128)
T ss_dssp EEEEETTEECSSC
T ss_pred EEEEECCEECCCC
Confidence 9999999665553
No 335
>2ggv_B NS3, non-structural protein 3; beta barrel, serine protease, viral protease, flavivirus, hydrolase; 1.80A {West nile virus} PDB: 2ijo_B
Probab=92.77 E-value=0.17 Score=45.79 Aligned_cols=131 Identities=15% Similarity=0.137 Sum_probs=70.5
Q ss_pred CCeEEEEeeeeCCCCCCccccCCCcceEEEEEEEeCCEEEecccccCCCCeEEEEEcCCCcEEEEEEEEeccCCCeEEEE
Q 009784 123 DAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIGTECDIAMLT 202 (526)
Q Consensus 123 ~SVV~I~~~~~~~~~~~P~~~~~~~~~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~~g~~~~a~vv~~d~~~DlAlLk 202 (526)
..|-+|....-. .....|-|+. .+|.+=|=.||-.++.- .. +++.+. ...-|-..|++ .
T Consensus 19 dGvYRI~~~gl~-----------G~~Q~GVGv~-~~GVFHTmWHVTrGa~L---~~--~g~~l~--P~wasV~~Dli--s 77 (185)
T 2ggv_B 19 TGVYRIMTRGLL-----------GSYQAGAGVM-VEGVFHTLWATTKGAAL---MS--GEGRLD--PYWGSVKEDRL--C 77 (185)
T ss_dssp SEEEEEEEECSS-----------SEEEEEEEEE-ETTEEEECHHHHTTCCE---EE--TTEEEC--EEEEETTTTEE--E
T ss_pred CcEEEEEecccc-----------ccceeeeEEe-eCCEEEeeeeecCcceE---EE--CCcEec--ceeehhhccee--e
Confidence 377777664421 1223455643 38899999999887532 22 333322 12233444543 2
Q ss_pred ecccccccCceeeecCCCCcCCCcEEEEeeCCCCCc--eeEEEEEEeceeeeeccCCceeeeEEEEcccCCCCCCCCeee
Q 009784 203 VEDDEFWEGVLPVEFGELPALQDAVTVVGYPIGGDT--ISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAF 280 (526)
Q Consensus 203 v~~~~~~~~~~pl~l~~~~~~g~~V~~iG~p~~~~~--~sv~~GiVs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlv 280 (526)
+-. +-+|...-+-.++|.++-++-+... .....|++.-. . .+..+|.+| +.+|.||+|++
T Consensus 78 YGG--------~WkL~~kW~g~~eVql~av~Pgk~~~nvQt~Pg~f~~~------~--GeigAI~lD--~p~GTSGSPIi 139 (185)
T 2ggv_B 78 YGG--------PWQLQHKWNGQDEVQMIVVEPGRNVKNVQTKPGVFKTP------E--GEIGAVTLD--FPTGTSGSPIV 139 (185)
T ss_dssp ESS--------SCCCCCCCCSSSCEEEEECCTTSCCEEEEECCEEEEET------T--EEEEEECCC--CCGGGTTCEEE
T ss_pred cCC--------cccCccccCCCceEEEEEECCCCceEEEEccCceEecC------C--CeEEEEECC--CCCCCCCCceE
Confidence 221 1123222233577888887766443 11223333211 1 123345454 56899999999
Q ss_pred cCCCeEEEEEee
Q 009784 281 NDKGKCVGIAFQ 292 (526)
Q Consensus 281 n~~G~VVGI~~~ 292 (526)
|.+|+|||+--.
T Consensus 140 n~~G~vvGLYGN 151 (185)
T 2ggv_B 140 DKNGDVIGLYGN 151 (185)
T ss_dssp CTTSCEEEEEEE
T ss_pred cCCCcEEEEecc
Confidence 999999999643
No 336
>2fp7_B Serine protease NS3; flavivirus, NS3 protease, NS2B cofactor; HET: OAR; 1.68A {West nile virus} SCOP: b.47.1.3
Probab=92.73 E-value=0.18 Score=45.25 Aligned_cols=114 Identities=16% Similarity=0.186 Sum_probs=61.8
Q ss_pred eEEEEEEEeCCEEEecccccCCCCeEEEEEcCCCcEEEEEEEEeccCCCeEEEEecccccccCceeeecCCCCcCCCcEE
Q 009784 149 SSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIGTECDIAMLTVEDDEFWEGVLPVEFGELPALQDAVT 228 (526)
Q Consensus 149 ~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~~g~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~pl~l~~~~~~g~~V~ 228 (526)
..|-|+. .+|.+=|=.||-.++.- .. +++.+. ...-|-..|++ .+-. +-+|...-+-.++|.
T Consensus 20 Q~GVGv~-~~GVFHTmWHVTrGa~l---~~--~g~~~~--P~wa~V~~Dli--sYGG--------~WkL~~kW~g~~eVq 81 (172)
T 2fp7_B 20 QAGAGVM-VEGVFHTLWHTTKGAAL---MS--GEGRLD--PYWGSVKEDRL--CYGG--------PWKLQHKWNGHDEVQ 81 (172)
T ss_dssp EEEEEEE-ETTEEEEEHHHHTTCCE---EE--TTEEEC--EEEEETTTTEE--EESS--------SCCCCCCCCSSSCEE
T ss_pred eeeeEEe-eCCEEEeeeeecCCceE---EE--CCcEec--ceeehheecee--ecCC--------ccccCcccCCCceEE
Confidence 3455643 38899999999887532 22 333321 12233344543 2211 112322223347788
Q ss_pred EEeeCCCCCc--eeEEEEEEeceeeeeccCCceeeeEEEEcccCCCCCCCCeeecCCCeEEEEE
Q 009784 229 VVGYPIGGDT--ISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIA 290 (526)
Q Consensus 229 ~iG~p~~~~~--~sv~~GiVs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VVGI~ 290 (526)
++-.+.+... .....|++.-. . .+..+|.+| +.+|.||+|++|.+|+|||+-
T Consensus 82 l~a~~Pgk~~~n~qt~Pg~f~~~------~--GeigaI~lD--~p~GtSGSPIin~~G~vVGLY 135 (172)
T 2fp7_B 82 MIVVEPGKNVKNVQTKPGVFKTP------E--GEIGAVTLD--YPTGTSGSPIVDKNGDVIGLY 135 (172)
T ss_dssp EEECCTTSCCEEEEECCEEEEET------T--EEEEEECCC--CCGGGTTCEEECTTSCEEEES
T ss_pred EEEECCCCceEEEEccCceEecC------C--CeEEEEECC--CCCCCCCCceEccCCcEEEEe
Confidence 8887666443 11223333211 1 123344444 568999999999999999995
No 337
>1yph_E Chymotrypsin A, chain C; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1ca0_C 1cbw_C 1cho_G 1gct_C 1ab9_C* 1ggd_C* 1gha_G 1ghb_G* 1gmc_G 1gmd_G 1gmh_G 1hja_C 1mtn_C 1n8o_C 1vgc_C* 1gg6_C 2cha_C* 2gch_G 2gct_C 2gmt_C* ...
Probab=92.70 E-value=0.17 Score=41.30 Aligned_cols=50 Identities=22% Similarity=0.339 Sum_probs=30.9
Q ss_pred cCCCCCCCCeeecC-CC--eEEEEEeeccccCccccccccccHHHHHHHHHHH
Q 009784 269 AINSGNSGGPAFND-KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDY 318 (526)
Q Consensus 269 ~i~~G~SGGPlvn~-~G--~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l 318 (526)
..+.|+|||||+.. +| .++||++.+........-+...-+....+++++.
T Consensus 41 ~~C~GDSGGPL~~~~~~~~~l~GIvS~g~~c~~~~~p~vyt~V~~y~~WI~~~ 93 (97)
T 1yph_E 41 SSCMGDSGGPLVCKKNGAWTLVGIVSWGSSTCSTSTPGVYARVTALVNWVQQT 93 (97)
T ss_dssp BCCTTCTTCEEEEEETTEEEEEEEEEECCTTCCTTSEEEEEEHHHHHHHHHHH
T ss_pred CCCcCCCCCcEEEEeCCeEEEEEEEEeCCCCCCCCCCeEEEEHHHhHHHHHHH
Confidence 57899999999864 23 7999998765221112223344455556666554
No 338
>2fom_B Polyprotein; flavivirus, NS3 protease, NS2B cofactor, viral protein-prote complex; 1.50A {Dengue virus 2} SCOP: b.47.1.3 PDB: 1df9_A 2qid_A 1bef_A
Probab=92.57 E-value=0.2 Score=45.46 Aligned_cols=130 Identities=17% Similarity=0.194 Sum_probs=70.2
Q ss_pred CCCeEEEEeeeeCCCCCCccccCCCcceEEEEEEEeCCEEEecccccCCCCeEEEEEcCCCcEEEEEEEEeccCCCeEEE
Q 009784 122 MDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIGTECDIAML 201 (526)
Q Consensus 122 ~~SVV~I~~~~~~~~~~~P~~~~~~~~~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~~g~~~~a~vv~~d~~~DlAlL 201 (526)
...|-+|....-. .....|-|+. .+|.+=|=.||-.++.- .. +++.+. ...-|-..|++
T Consensus 19 ~dGvYRI~~~gl~-----------G~~Q~GVGv~-~~GVFHTmWHVTrGa~l---~~--~g~~l~--P~wa~V~~Dli-- 77 (185)
T 2fom_B 19 EDGAYRIKQKGIL-----------GYSQIGAGVY-KEGTFHTMWHVTRGAVL---MH--KGKRIE--PSWADVKKDLI-- 77 (185)
T ss_dssp CSEEEEEEEEETT-----------EEEEEEEEEE-ETTEEEEEHHHHTTCCE---EE--TTEEEC--EEEEETTTTEE--
T ss_pred CCcEEEEEecccc-----------ccceeeeEEe-eCCEEEeeeeecCcceE---EE--CCcEec--ceeehheecee--
Confidence 3477787765421 1123455543 38899999999887532 22 333321 12233344543
Q ss_pred EecccccccCceeeecCCCCcCCCcEEEEeeCCCCCc--eeEEEEEEeceeeeeccCCceeeeEEEEcccCCCCCCCCee
Q 009784 202 TVEDDEFWEGVLPVEFGELPALQDAVTVVGYPIGGDT--ISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPA 279 (526)
Q Consensus 202 kv~~~~~~~~~~pl~l~~~~~~g~~V~~iG~p~~~~~--~sv~~GiVs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPl 279 (526)
.+-. +-+|...-+-.++|.++-++-+... .....|++.- ..+ +..+|.+| +.+|.||+|+
T Consensus 78 sYGG--------~WkL~~kW~g~~eVql~av~Pgk~~~nvQt~Pg~f~~------~~G--eigaI~lD--~p~GTSGSPI 139 (185)
T 2fom_B 78 SYGG--------GWKLEGEWKEGEEVQVLALEPGKNPRAVQTKPGLFKT------NTG--TIGAVSLD--FSPGTSGSPI 139 (185)
T ss_dssp EESS--------SCCCCCCCCTTCCEEEEECCTTSCCEEEEECCEEEEC------SSC--EEEEECCC--SCGGGTTCEE
T ss_pred ecCC--------cccCccccCCCceEEEEEECCCCceEEEEcCCceeec------CCC--eEEEEECC--CCCCCCCCce
Confidence 2221 1123222233477888887766443 1122333321 112 23445554 5689999999
Q ss_pred ecCCCeEEEEE
Q 009784 280 FNDKGKCVGIA 290 (526)
Q Consensus 280 vn~~G~VVGI~ 290 (526)
+|.+|+|||+-
T Consensus 140 in~~G~vvGLY 150 (185)
T 2fom_B 140 VDKKGKVVGLY 150 (185)
T ss_dssp ECTTSCEEEET
T ss_pred EccCCcEEEEe
Confidence 99999999985
No 339
>3e90_B NS3 protease; trypsin-like serine protease, protease inhibitor, catalytic histidine, induced FIT, ATP-binding, capsid protein, helicase; HET: NKK; 2.45A {West nile virus} SCOP: b.47.1.3
Probab=92.43 E-value=0.27 Score=44.88 Aligned_cols=129 Identities=16% Similarity=0.154 Sum_probs=70.7
Q ss_pred CCeEEEEeeeeCCCCCCccccCCCcceEEEEEEEeCCEEEecccccCCCCeEEEEEcCCCcEEEEEEEEeccCCCeEEEE
Q 009784 123 DAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIGTECDIAMLT 202 (526)
Q Consensus 123 ~SVV~I~~~~~~~~~~~P~~~~~~~~~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~~g~~~~a~vv~~d~~~DlAlLk 202 (526)
..|-+|....-. .....|-|+. .+|.+=|=.||-.++.- .. +++.+. ...-|-..|++ .
T Consensus 24 dGVYRI~~~gl~-----------G~~Q~GVGv~-k~GVFHTMWHVTrGa~l---~~--~g~~l~--P~WasV~~Dli--s 82 (198)
T 3e90_B 24 TGVYRIMTRGLL-----------GSYQAGAGVM-VEGVFHTLWHTTKGAAL---MS--GEGRLD--PYWGSVKEDRL--C 82 (198)
T ss_dssp SEEEEEEEEETT-----------EEEEEEEEEE-ETTEEEECHHHHTTCCE---EE--TTEEEC--EEEEETTTTEE--E
T ss_pred CceEEEEecccc-----------ccceeeeEEe-eCCEEEeeeeecCcceE---EE--CCcEec--ceeehheecee--e
Confidence 477788775521 1123455543 38899999999887532 22 233221 12233444542 2
Q ss_pred ecccccccCceeeecCCCCcCCCcEEEEeeCCCCCce--eEEEEEEeceeeeeccCCceeeeEEEEcccCCCCCCCCeee
Q 009784 203 VEDDEFWEGVLPVEFGELPALQDAVTVVGYPIGGDTI--SVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAF 280 (526)
Q Consensus 203 v~~~~~~~~~~pl~l~~~~~~g~~V~~iG~p~~~~~~--sv~~GiVs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlv 280 (526)
+-. +-+|...-.-.++|.++-++-+.... ....|++.- .. .+..+|..| ..+|.||+|++
T Consensus 83 YGG--------~WkL~~~W~g~~eVQl~Av~Pgk~~~~~Qt~PG~f~~------~~--g~iGaV~lD--~p~GTSGSPIi 144 (198)
T 3e90_B 83 YGG--------PWKLQHKWNGQDEVQMIVVEPGKNVKNVRTKPGVFKT------PE--GEIGAVTLD--FPTGTSGSPIV 144 (198)
T ss_dssp ESS--------SCCCCCCCCSSSCEEEEECCTTSCCEEEEECCEEEEE------TT--EEEEEECCC--CCTTCTTCEEE
T ss_pred cCC--------cccCCcccCCCceEEEEEECCCCceEEEEeCCeEEEc------CC--CeEEEEECC--CCCCCCCCcee
Confidence 221 12232222223788888887765431 122344321 11 123345555 45899999999
Q ss_pred cCCCeEEEEE
Q 009784 281 NDKGKCVGIA 290 (526)
Q Consensus 281 n~~G~VVGI~ 290 (526)
|.+|+|||+-
T Consensus 145 n~~G~VVGLY 154 (198)
T 3e90_B 145 DKNGDVIGLY 154 (198)
T ss_dssp CTTCCEEEEC
T ss_pred cCCCcEEEEe
Confidence 9999999985
No 340
>3u1j_B Serine protease NS3; serine protease, ER MEM hydrolase-hydrolase inhibitor complex; 1.80A {Dengue virus 3} SCOP: b.47.1.3 PDB: 3u1i_B
Probab=92.32 E-value=0.3 Score=44.41 Aligned_cols=129 Identities=16% Similarity=0.183 Sum_probs=70.6
Q ss_pred CCeEEEEeeeeCCCCCCccccCCCcceEEEEEEEeCCEEEecccccCCCCeEEEEEcCCCcEEEEEEEEeccCCCeEEEE
Q 009784 123 DAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIGTECDIAMLT 202 (526)
Q Consensus 123 ~SVV~I~~~~~~~~~~~P~~~~~~~~~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~~g~~~~a~vv~~d~~~DlAlLk 202 (526)
..|-+|....-. .....|-|+. .+|.+=|=.||-.++.- .. +++.+. ...-|-..|++ .
T Consensus 29 dGVYRI~~~gl~-----------G~~Q~GVGv~-k~GVFHTMWHVTrGa~l---~~--~g~~l~--P~wasV~~Dli--s 87 (191)
T 3u1j_B 29 EGVYRIKQQGIF-----------GKTQVGVGVQ-KEGVFHTMWHVTRGAVL---TH--NGKRLE--PNWASVKKDLI--S 87 (191)
T ss_dssp SEEEEEEEEETT-----------EEEEEEEEEE-ETTEEEEEHHHHTTCCE---EE--TTEEEC--EEEEETTTTEE--E
T ss_pred CceEEEEecccc-----------ccceeeeEEe-eCCEEEeeeeecCcceE---EE--CCcEec--ceeecceecee--e
Confidence 377788775521 1123455543 38899999999887532 22 233221 12233444542 1
Q ss_pred ecccccccCceeeecCCCCcCCCcEEEEeeCCCCCce--eEEEEEEeceeeeeccCCceeeeEEEEcccCCCCCCCCeee
Q 009784 203 VEDDEFWEGVLPVEFGELPALQDAVTVVGYPIGGDTI--SVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAF 280 (526)
Q Consensus 203 v~~~~~~~~~~pl~l~~~~~~g~~V~~iG~p~~~~~~--sv~~GiVs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlv 280 (526)
+-. +-+|...-+-.++|.++-++-+.... ....|++.- ..+ +..+|..| ..+|.||+|++
T Consensus 88 YGG--------~WkL~~~W~g~~eVQl~Av~Pgk~~~~~Qt~PG~f~~------~~g--~iGaV~lD--~p~GTSGSPIi 149 (191)
T 3u1j_B 88 YGG--------GWRLSAQWQKGEEVQVIAVEPGKNPKNFQTMPGTFQT------TTG--EIGAIALD--FKPGTSGSPII 149 (191)
T ss_dssp ESS--------SCCCCCCCCTTCCEEEEECCTTSCCEEEEECCEEEEC------SSC--EEEEECCC--CCTTCTTCEEE
T ss_pred cCC--------cccCCcccCCCceEEEEEECCCCceEEEEeCCeEEEc------CCC--eEEEEECC--CCCCCCCCcee
Confidence 221 12232222234788888887765431 122344321 111 23445555 45899999999
Q ss_pred cCCCeEEEEE
Q 009784 281 NDKGKCVGIA 290 (526)
Q Consensus 281 n~~G~VVGI~ 290 (526)
|.+|+|||+-
T Consensus 150 n~~G~VVGLY 159 (191)
T 3u1j_B 150 NREGKVVGLY 159 (191)
T ss_dssp CTTSCEEEEC
T ss_pred cCCCcEEEEe
Confidence 9999999985
No 341
>3lkw_A Fusion protein of nonstructural protein 2B and nonstructural protein 3; viral protease, serine protease, NS3 protease, NS2B cofactor; 2.00A {Dengue virus 1} PDB: 3l6p_A
Probab=91.57 E-value=0.36 Score=45.24 Aligned_cols=113 Identities=17% Similarity=0.174 Sum_probs=62.3
Q ss_pred EEEEEEEeCCEEEecccccCCCCeEEEEEcCCCcEEEEEEEEeccCCCeEEEEecccccccCceeeecCCCCcCCCcEEE
Q 009784 150 SSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIGTECDIAMLTVEDDEFWEGVLPVEFGELPALQDAVTV 229 (526)
Q Consensus 150 ~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~~g~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~pl~l~~~~~~g~~V~~ 229 (526)
.|-|+. .+|.+=|=.||-.++.- .. +++.+. ...-|-..|++ .+-. +-+|...-.-.++|.+
T Consensus 86 ~GVGv~-~~GVFHTmWHVTrGa~l---~~--~g~~~~--P~wa~V~~Dli--sYGG--------~WkL~~~W~g~~eVqv 147 (236)
T 3lkw_A 86 VGVGVF-QEGVFHTMWHVTRGAVL---MY--QGKRLE--PSWASVKKDLI--SYGG--------GWRFQGSWNAGEEVQV 147 (236)
T ss_dssp EEEEEE-ETTEEEECHHHHTTCCE---EE--TTEEEC--EEEEETTTTEE--EESS--------SCCCCCCCCTTCCEEE
T ss_pred eeeEEe-eCCEEEEeeeecCcceE---EE--CCcEec--ceeehheecee--ecCC--------CccCCcccCCCceEEE
Confidence 455543 38899999999887532 22 233221 12233344442 2221 1223222223478888
Q ss_pred EeeCCCCCce--eEEEEEEeceeeeeccCCceeeeEEEEcccCCCCCCCCeeecCCCeEEEEE
Q 009784 230 VGYPIGGDTI--SVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIA 290 (526)
Q Consensus 230 iG~p~~~~~~--sv~~GiVs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VVGI~ 290 (526)
+-++.+.... ....|++.- .. .+..+|..| ..+|.||+|++|.+|+|||+-
T Consensus 148 ~A~~Pg~~~~~~qt~PG~~~~------~~--g~igav~lD--~p~GTSGSPIin~~G~VvGLY 200 (236)
T 3lkw_A 148 IAVEPGKNPKNVQTAPGTFKT------PE--GEVGAIALD--FKPGTAGSPIVNREGKIVGLY 200 (236)
T ss_dssp EECCTTSCCEEEEECCEEEEE------TT--EEEEEECCC--CCTTCTTCEEECTTSCEEEES
T ss_pred EEECCCCceEEEEeCCeEEEc------CC--CeEEEEECC--CCCCCCCCceecCCCcEEEEe
Confidence 8887765431 123444321 11 123345555 458999999999999999985
No 342
>3su6_A NS3 protease, NS4A protein; drug resistance, drug design, protease inhibitors, serine PR viral protein, hydrolase-inhibitor complex; HET: SU3; 1.10A {Hepatitis c virus} PDB: 3su2_A* 3sv9_A* 3m5l_A* 3m5m_A* 3m5n_A 3m5o_A 3rc4_A 3rc5_A 3rc6_A 3su3_A* 3su4_A* 3sv6_A* 3sv7_A* 3su1_A* 3su5_A* 3sv8_A* 3su0_A* 2p59_A* 2qv1_A 1a1q_A ...
Probab=89.67 E-value=0.28 Score=44.48 Aligned_cols=44 Identities=25% Similarity=0.399 Sum_probs=30.2
Q ss_pred cCCCCCCCCeeecCCCeEEEEEeeccccCccccccccccHHHHH
Q 009784 269 AINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIM 312 (526)
Q Consensus 269 ~i~~G~SGGPlvn~~G~VVGI~~~~~~~~~~~~~~~aIP~~~i~ 312 (526)
....|+||||++...|.+|||..+.....+...--.++|++.+.
T Consensus 154 S~lkGSSGgPvLC~~GHaVGmf~aav~trGvakai~fvPve~l~ 197 (203)
T 3su6_A 154 SYLKGSAGGPLLCPAGHAVGIFRTAVSTRGVAKAVDFIPVESLE 197 (203)
T ss_dssp GGTTTCTTCEEECTTSCEEEEEEEEEEETTEEEEEEEEEHHHHH
T ss_pred eeccCCCCCceecCCCCEEEEEEEEEEcCceeeeEEEEEccccc
Confidence 44589999999999999999985544332322223346876654
No 343
>2yew_A Capsid protein, coat protein; alphavirus, molecular dynamics; 5.00A {Barmah forest virus}
Probab=88.12 E-value=0.28 Score=45.84 Aligned_cols=26 Identities=35% Similarity=0.650 Sum_probs=23.2
Q ss_pred cCCCCCCCCeeecCCCeEEEEEeecc
Q 009784 269 AINSGNSGGPAFNDKGKCVGIAFQSL 294 (526)
Q Consensus 269 ~i~~G~SGGPlvn~~G~VVGI~~~~~ 294 (526)
.-.+|+||-|++|..|+||+|+.++.
T Consensus 199 ~G~~GDSGRpI~DN~GrVVaIVLGGa 224 (253)
T 2yew_A 199 SGKPGDSGRPIFDNTGKVVAIVLGGA 224 (253)
T ss_dssp SCCSSCTTCEEECSSCBEEEEEEEEE
T ss_pred CCCCCCCCCccccCCCcEEEEEecCC
Confidence 34589999999999999999998876
No 344
>4ash_A NS6 protease; hydrolase, trypsin-like, calicivirus; 1.58A {Murine norovirus 1}
Probab=87.80 E-value=3.1 Score=36.64 Aligned_cols=135 Identities=19% Similarity=0.203 Sum_probs=72.4
Q ss_pred eEEEEEEEeCCEEEecccccC-CCCeEEEEEcCCCcEEEEEEEEeccCCCeEEEEecccccccCceeeecCCCCcCCCcE
Q 009784 149 SSSSGFAIGGRRVLTNAHSVE-HYTQVKLKKRGSDTKYLATVLAIGTECDIAMLTVEDDEFWEGVLPVEFGELPALQDAV 227 (526)
Q Consensus 149 ~~GSGfvI~~g~ILT~aHvV~-~~~~i~V~~~~~g~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~pl~l~~~~~~g~~V 227 (526)
+.|=||-|+...++|+-||+. ++.++. | .+-+.+.++..-+++.+++....- .++.-..|.+....|.-+
T Consensus 15 gsgwgfwVS~~~fiTaTHV~p~~~~eif------G--~p~~~i~v~~~GEf~~~rfp~~~r-pdvsgmiLEeg~peGtV~ 85 (185)
T 4ash_A 15 GTGWGFWVSGHVFITAKHVAPPKGTEIF------G--RKPGDFTVTSSGDFLKYYFTSAVR-PDIPAMVLENGCQEGVVA 85 (185)
T ss_dssp TTEEEEESSSSEEEEEGGGSCCTTCCBT------T--BCTTSEEEEEETTEEEEEESSCSC-TTSCCCEECSSCCTTCEE
T ss_pred cCceEEEEcccEEEEEEeecCCCchhhc------C--CccceEEEeecCcEEEEEcCCCcC-CCCcceEEecCCCCCcEE
Confidence 457789999999999999995 333310 0 011112233445677777765421 234555555444445544
Q ss_pred EE-EeeCCCCC-ceeEEEEEEeceeeee-ccCCceeeeEE-------EEcccCCCCCCCCeeecCCC---eEEEEEeecc
Q 009784 228 TV-VGYPIGGD-TISVTSGVVSRIEILS-YVHGSTELLGL-------QIDAAINSGNSGGPAFNDKG---KCVGIAFQSL 294 (526)
Q Consensus 228 ~~-iG~p~~~~-~~sv~~GiVs~~~~~~-~~~~~~~~~~i-------~~da~i~~G~SGGPlvn~~G---~VVGI~~~~~ 294 (526)
.+ +-.+.+.. ...+..|.+....... ..++. ..++ ..|-...||+-|.|-+-..| -|+||+++..
T Consensus 86 svlikR~sgeliPlavRmgt~as~kIqGk~v~gq--tGmlltganaK~mdLGT~PGDCGcPYvykrgn~~vv~GVHtAat 163 (185)
T 4ash_A 86 SVLVKRASGEMLALAVRMGSQAAIKIGSAVVHGQ--TGMLLTGSNAKAQDLGTIPGDAGCPYVYKKGNTWVVIGVHVAAT 163 (185)
T ss_dssp EEEEECTTCCEEEEEEEEEEEEEEEETTEEEEEE--EEEECC-------CCSCCTTCTTCEEEEEETTEEEEEEEEEEEC
T ss_pred EEEEecCCCCcceeEEEecceeeeEEeeeEecce--eeeEEecCCcccCcCCCCCCCCCCceEEeeCCceEEEEEEEeec
Confidence 33 33443321 2345556665543210 01111 1122 22446779999999775533 5999998865
No 345
>1ep5_B Capsid protein C, coat protein C; beta barrel, hydrolase; 2.30A {Venezuelan equine encephalitis virus} SCOP: b.47.1.3 PDB: 1ep6_A 3j0c_C
Probab=87.67 E-value=0.31 Score=41.72 Aligned_cols=28 Identities=25% Similarity=0.574 Sum_probs=24.1
Q ss_pred cccCCCCCCCCeeecCCCeEEEEEeecc
Q 009784 267 DAAINSGNSGGPAFNDKGKCVGIAFQSL 294 (526)
Q Consensus 267 da~i~~G~SGGPlvn~~G~VVGI~~~~~ 294 (526)
...-.+|+||-|++|..|+||+|+.++.
T Consensus 100 ~G~g~~GdSGrpI~Dn~GrVVaIVlGGa 127 (157)
T 1ep5_B 100 KGVGAKGDSGRPILDNQGRVVAIVLGGV 127 (157)
T ss_dssp TTCCCTTCTTCEEECTTSCEEEEEEEEE
T ss_pred cCCCCCCCCCCccCcCCCcEEEEEecCC
Confidence 3445689999999999999999998865
No 346
>1vcp_A Semliki forest virus capsid protein; virus coat protein, polyprotein, transmembrane, glycoprotein, nucleocapsid protein, viral protein; 3.00A {Semliki forest virus} SCOP: b.47.1.3 PDB: 1dyl_A 1vcq_A
Probab=87.35 E-value=0.35 Score=40.98 Aligned_cols=27 Identities=37% Similarity=0.681 Sum_probs=23.6
Q ss_pred ccCCCCCCCCeeecCCCeEEEEEeecc
Q 009784 268 AAINSGNSGGPAFNDKGKCVGIAFQSL 294 (526)
Q Consensus 268 a~i~~G~SGGPlvn~~G~VVGI~~~~~ 294 (526)
..-.+|+||-|++|..|+||+|+.++.
T Consensus 94 G~g~~GdSGrpI~Dn~GrVVaIVlGG~ 120 (149)
T 1vcp_A 94 GAGKPGDSGRPIFDNKGRVVAIVLGGA 120 (149)
T ss_dssp TSCCTTCTTCEEECTTSCEEEEEEEEE
T ss_pred cCCCCCCCCCccCcCCCcEEEEEecCC
Confidence 345689999999999999999998865
No 347
>1wxr_A Haemoglobin protease; hemoglobine protease, autotransporter, beta helix, heme uptake, spate, hydrolase; 2.20A {Escherichia coli} PDB: 3ak5_A
Probab=87.25 E-value=1.4 Score=50.62 Aligned_cols=63 Identities=11% Similarity=0.079 Sum_probs=40.3
Q ss_pred eEEEEEEEeCCEEEecccccCCCCeEEEEEcCCC-cEEEEEEEEec--cCCCeEEEEecccccccCceeeecCC
Q 009784 149 SSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGSD-TKYLATVLAIG--TECDIAMLTVEDDEFWEGVLPVEFGE 219 (526)
Q Consensus 149 ~~GSGfvI~~g~ILT~aHvV~~~~~i~V~~~~~g-~~~~a~vv~~d--~~~DlAlLkv~~~~~~~~~~pl~l~~ 219 (526)
..|.+.+|++.||||.+|.... . .|.+. .+ ..|.. +... ...|+++.|++.-- ..+.|+++.+
T Consensus 56 ~~G~aTLI~pqYiVSvaHn~gy-~--~v~fG-~~~n~Y~i--V~rnn~~~~Dy~~pRL~K~V--TEvaP~~~t~ 121 (1048)
T 1wxr_A 56 EIGVATLINPQYIASVKHNGGY-T--NVSFG-DGENRYNI--VDRNNAPSLDFHAPRLDKLV--TEVAPTAVTA 121 (1048)
T ss_dssp TTCCCEEEETTEEEBCTTCCSC-C--EECCT-TSCCCEEE--EECCBCSSSSCBCCEESSCC--CSSCCCCBCS
T ss_pred CCceEEEEcCcEEEEeeecCCC-c--eEEeC-CCcceEEE--EeeCCCCCCCeeeeeccccc--ccccceeecc
Confidence 3478889999999999996543 3 34553 33 34543 3322 24599999998743 2456655543
No 348
>1svp_A Sindbis virus capsid protein; chymotrypsin-like serine, mutant, coat protein, viral protein; 2.00A {Sindbis virus} SCOP: b.47.1.3 PDB: 1kxb_A 1kxa_A 2snw_A 1kxc_A 1kxd_A 1kxe_A 2snv_A 1z8y_Q 1wyk_A
Probab=86.89 E-value=0.38 Score=41.40 Aligned_cols=26 Identities=23% Similarity=0.535 Sum_probs=23.0
Q ss_pred cCCCCCCCCeeecCCCeEEEEEeecc
Q 009784 269 AINSGNSGGPAFNDKGKCVGIAFQSL 294 (526)
Q Consensus 269 ~i~~G~SGGPlvn~~G~VVGI~~~~~ 294 (526)
.-.+|+||-|++|..|+||+|+.++.
T Consensus 104 vG~~GDSGRpI~DN~GrVVaivlgg~ 129 (161)
T 1svp_A 104 VGGRGDAGRPIMDNSGRVVAIVLGGA 129 (161)
T ss_dssp SCCTTCTTCEEECTTSCEEEEEEEEE
T ss_pred CCCCCCCCCccCcCCCcEEEEEecCC
Confidence 34589999999999999999998865
No 349
>1kxf_A Sindbis virus capsid protein; chymotrypsin-like serine proteinase, wild type, viral protein; 2.38A {Sindbis virus} SCOP: b.47.1.3 PDB: 1ld4_A 3j0f_A
Probab=86.85 E-value=0.34 Score=45.62 Aligned_cols=26 Identities=27% Similarity=0.549 Sum_probs=23.1
Q ss_pred cCCCCCCCCeeecCCCeEEEEEeecc
Q 009784 269 AINSGNSGGPAFNDKGKCVGIAFQSL 294 (526)
Q Consensus 269 ~i~~G~SGGPlvn~~G~VVGI~~~~~ 294 (526)
.-.+|+||-|++|..|+||+|+.++.
T Consensus 209 ~G~~GDSGRpI~DN~GrVVaIVLGGa 234 (264)
T 1kxf_A 209 VGGRGDSGRPIMDNSGRVVAIVLGGA 234 (264)
T ss_dssp SCCTTCTTCEEECTTSCEEEEEEEEE
T ss_pred CCCCCCCCCccccCCCcEEEEEecCC
Confidence 34589999999999999999998876
No 350
>4agk_A Capsid protein, coat protein, C; hydrolase, viral protein; 1.81A {Aura virus} PDB: 4agj_A 1kxa_A 2snw_A 1svp_A 1kxb_A 1kxc_A 1kxd_A 1kxe_A 2snv_A 1z8y_Q 1wyk_A
Probab=86.66 E-value=0.42 Score=40.99 Aligned_cols=28 Identities=32% Similarity=0.561 Sum_probs=24.2
Q ss_pred cccCCCCCCCCeeecCCCeEEEEEeecc
Q 009784 267 DAAINSGNSGGPAFNDKGKCVGIAFQSL 294 (526)
Q Consensus 267 da~i~~G~SGGPlvn~~G~VVGI~~~~~ 294 (526)
...-.+|+||-|++|..|+||+|+.++.
T Consensus 101 ~g~g~~GdSGrPi~Dn~GrVVaIVlGG~ 128 (158)
T 4agk_A 101 TGAGGPGDSGRPILDNSGKVVAIVLGGA 128 (158)
T ss_dssp TTSSCTTCTTCEEECTTSCEEEEEEEEE
T ss_pred cccCCCCCCCCccccCCCCEEEEEecCC
Confidence 3455689999999999999999998865
No 351
>2fyq_A Chymotrypsin-like cysteine proteinase; protease, norovirus, calicivirus, viral protein; 1.50A {Norwalk virus} PDB: 2fyr_A 2iph_A* 1wqs_A*
Probab=81.56 E-value=5.7 Score=35.12 Aligned_cols=136 Identities=18% Similarity=0.228 Sum_probs=71.9
Q ss_pred eEEEEEEEeCCEEEecccccC-CCCeEEEEEcCCCcEEEEEEEEeccCCCeEEEEecccccccCceeeecCCCCcCCCcE
Q 009784 149 SSSSGFAIGGRRVLTNAHSVE-HYTQVKLKKRGSDTKYLATVLAIGTECDIAMLTVEDDEFWEGVLPVEFGELPALQDAV 227 (526)
Q Consensus 149 ~~GSGfvI~~g~ILT~aHvV~-~~~~i~V~~~~~g~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~pl~l~~~~~~g~~V 227 (526)
+.|=||-|+...++|+-||+. ++.++. | .+-+.+.++..-++..+++..+.- .++.-..|.+....|.-+
T Consensus 26 gsgwgfwVS~~~fIT~tHV~p~~~~e~f------G--~p~~~i~v~~~GEf~~~rfpk~~r-pdvsgmiLEeg~peGtV~ 96 (194)
T 2fyq_A 26 GSGWGFWVSPTVFITTTHVVPTGVKEFF------G--EPLSSIAIHQAGEFTQFRFSKKMR-PDLTGMVLEEGCPEGTVC 96 (194)
T ss_dssp TTEEEEESSSSEEEEEGGGSCSSCSEET------T--EEGGGEEEEEETTEEEEEESSCSC-TTSCCCEECSSCCTTCEE
T ss_pred cCceeEEEcccEEEEEeeecCCCChhhc------C--ceeeeEEEeecCcEEEEEcCCCcC-CCCcceEEecCCCCCcEE
Confidence 457789999999999999995 444321 0 111123344445677777765421 234445554443345443
Q ss_pred EE-EeeCCCCC-ceeEEEEEEeceeeee-ccCCceeeeEEE-------EcccCCCCCCCCeeecCCC---eEEEEEeecc
Q 009784 228 TV-VGYPIGGD-TISVTSGVVSRIEILS-YVHGSTELLGLQ-------IDAAINSGNSGGPAFNDKG---KCVGIAFQSL 294 (526)
Q Consensus 228 ~~-iG~p~~~~-~~sv~~GiVs~~~~~~-~~~~~~~~~~i~-------~da~i~~G~SGGPlvn~~G---~VVGI~~~~~ 294 (526)
.+ +-.+.+.. ...+..|.+....... ...+. ..++. .|-...||+-|.|-+-..| -|+||+.+..
T Consensus 97 silikR~sgellPlaVRmgt~as~kIqGk~v~gq--tGmlltganaK~mdLGT~PGDCGcPYvykrgndwvv~GVH~Aat 174 (194)
T 2fyq_A 97 SVLIKRDSGELLPLAVRMGAIASMRIQGRLVHGQ--SGMLLTGANAKGMDLGTIPGDCGAPYVHKRGNDWVVCGVHAAAT 174 (194)
T ss_dssp EEEEECTTSCEEEEEEEEEEEEEEEETTEEEEEE--EEEECC-----------CGGGTTCEEEEEETTEEEEEEEEEEEC
T ss_pred EEEEecCCCCcceEEEEecceeeeEEeeeEecce--eeeEEecCCcccCcCCCCCCCCCCceEEeeCCceEEEEEEEeec
Confidence 33 34444321 2355666666543210 01111 11222 2345679999999875533 5999998865
Q ss_pred c
Q 009784 295 K 295 (526)
Q Consensus 295 ~ 295 (526)
.
T Consensus 175 r 175 (194)
T 2fyq_A 175 K 175 (194)
T ss_dssp S
T ss_pred c
Confidence 3
No 352
>3dor_A Protein CT_858, CPAF; mature CPAF, dimer, transferase; 2.20A {Chlamydia trachomatis} PDB: 3dpm_A* 3dpn_A 3dja_A
Probab=55.04 E-value=43 Score=36.09 Aligned_cols=77 Identities=12% Similarity=0.138 Sum_probs=44.1
Q ss_pred eEEEEeCCCCcccCCCCCCcEEEEECCEEecCCCCccc-ccc------cchhhhhhhhh-----cC-CCCEEEEEEEE-C
Q 009784 355 VRIRRVDPTAPESEVLKPSDIILSFDGIDIANDGTVPF-RHG------ERIGFSYLVSQ-----KY-TGDSAAVKVLR-D 420 (526)
Q Consensus 355 v~V~~V~~~spA~~GL~~GDvIl~vnG~~I~~~~~l~~-~~~------~~~~~~~~l~~-----~~-~G~~v~l~v~R-~ 420 (526)
++|..+.... + +++.||.|++|||+++..+-+-.. ..| +|.-+..+..+ .. +-+.++|++.| +
T Consensus 98 i~V~dv~~~~-s--~I~vGdEIlsING~pv~e~Lek~~~~~Gsn~~a~~~~Al~~Lt~R~~~l~~~~p~~~~tlk~~~~~ 174 (583)
T 3dor_A 98 FYFVDIMTFS-S--EIRVGDELLEVDGAPVQDVLATLYGSNHKGTAAEESAALRTLFSRMASLGHKVPSGRTTLKIRRPF 174 (583)
T ss_dssp EEEEEECSSC-C--SSCTTCEEEEETTEEHHHHHHTTSCTTCCCCHHHHHHHHHHHTEEEGGGTCCCCCSEEEEEEECTT
T ss_pred EEEEeccccc-c--CCCCCCEEEEECCccHHHHHHHHHHhcCCCcHHHHHHHHHHHhhhHHhhccCCCCCceEEEEECCC
Confidence 6666552221 1 699999999999999975432211 111 11111111111 12 34589999866 6
Q ss_pred CEEEEEEEEecccc
Q 009784 421 SKILNFNITLATHR 434 (526)
Q Consensus 421 G~~~~~~v~l~~~~ 434 (526)
|+..+++++-...+
T Consensus 175 G~~~~v~~pW~~~p 188 (583)
T 3dor_A 175 GTTREVRVKWRYVP 188 (583)
T ss_dssp SCEEEEEEECEEEC
T ss_pred CcEEEEEeeeEEcc
Confidence 88888877654443
No 353
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=48.00 E-value=21 Score=29.12 Aligned_cols=45 Identities=13% Similarity=-0.052 Sum_probs=29.1
Q ss_pred eEEEEeccccceeeeeeeecc--hhhhccccccceeeeecccchhhh
Q 009784 453 GFVFSRCLYLISVLSMERIMN--MKLRSSFWTSSCIQCHNCQMSSLL 497 (526)
Q Consensus 453 G~~f~~lt~~~~~~~~~~i~~--~~~~sg~~~~~~~~~~~~~~~~~~ 497 (526)
|+.+.........+.+..+.+ .+.++||..||.|...|.+-....
T Consensus 30 G~~l~~~~~~~~gv~V~~V~~~s~A~~aGL~~GD~Il~vng~~v~~~ 76 (114)
T 1x5n_A 30 GCSISSGPIQKPGIFISHVKPGSLSAEVGLEIGDQIVEVNGVDFSNL 76 (114)
T ss_dssp CEEEEECCSSSCSEEEEEECTTSTTTTTTCCTTCEEEEETTEETTSC
T ss_pred eEEEeecCCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCC
Confidence 555544432233455556655 456789999999999998665544
No 354
>4hcz_A PHD finger protein 1; protein-peptide complex, tudor, histone binding, H3K36ME3, N nucleus, transcription; HET: M3L; 1.85A {Homo sapiens}
Probab=46.22 E-value=60 Score=23.76 Aligned_cols=39 Identities=18% Similarity=0.285 Sum_probs=33.5
Q ss_pred cCCCCeEEEEEcCCCcEEEEEEEEeccCCCeEEEEecccc
Q 009784 168 VEHYTQVKLKKRGSDTKYLATVLAIGTECDIAMLTVEDDE 207 (526)
Q Consensus 168 V~~~~~i~V~~~~~g~~~~a~vv~~d~~~DlAlLkv~~~~ 207 (526)
+...+++.++.. ||.-|.++++.++....-++++++...
T Consensus 4 f~~GedVLarws-DG~fYlGtI~~V~~~~~~clV~F~D~s 42 (58)
T 4hcz_A 4 LWEGQDVLARWT-DGLLYLGTIKKVDSAREVCLVQFEDDS 42 (58)
T ss_dssp CCTTCEEEEECT-TSCEEEEEEEEEETTTTEEEEEETTSC
T ss_pred cccCCEEEEEec-CCCEEeEEEEEEecCCCEEEEEEcCCC
Confidence 445678888886 999999999999999999999998653
No 355
>2hrv_A 2A cysteine proteinase; hydrolase (cysteine proteinase); 1.95A {Human rhinovirus 2} SCOP: b.47.1.4
Probab=39.95 E-value=83 Score=27.32 Aligned_cols=30 Identities=20% Similarity=0.304 Sum_probs=24.3
Q ss_pred EEEEcccCCCCCCCCeeecCCCeEEEEEeec
Q 009784 263 GLQIDAAINSGNSGGPAFNDKGKCVGIAFQS 293 (526)
Q Consensus 263 ~i~~da~i~~G~SGGPlvn~~G~VVGI~~~~ 293 (526)
++.......||+=||.|... .-||||++++
T Consensus 94 ~l~g~G~~epGDCGG~L~C~-HGviGivTaG 123 (142)
T 2hrv_A 94 LLIGEGPCEPGDCGGKLLCK-HGVIGIVTAG 123 (142)
T ss_dssp EEEEECCCCTTCTTCEEEET-TEEEEEEEEE
T ss_pred EEEEEcCCCCCCCCceeeeC-CCceEEEecC
Confidence 44455678899999999985 5699999985
No 356
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=35.76 E-value=36 Score=26.86 Aligned_cols=37 Identities=11% Similarity=-0.040 Sum_probs=28.4
Q ss_pred eeeeeecc--hhhhcc-ccccceeeeecccchhhhHHHHH
Q 009784 466 LSMERIMN--MKLRSS-FWTSSCIQCHNCQMSSLLWCLRC 502 (526)
Q Consensus 466 ~~~~~i~~--~~~~sg-~~~~~~~~~~~~~~~~~~~~~~~ 502 (526)
+.+..+.+ .+.++| |+.||.|...|.+-....|....
T Consensus 33 v~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~ 72 (96)
T 2qkv_A 33 CTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVS 72 (96)
T ss_dssp EEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHH
T ss_pred EEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHH
Confidence 45666655 456899 99999999999988877665543
No 357
>2o8m_A Protease; NS3, NS4A, viral protein; 2.00A {Hepatitis c virus} PDB: 3lon_A* 2a4g_A* 2a4q_A* 2fm2_A* 2obo_A* 2obq_A 2a4r_A* 2oc1_A* 2oc7_A* 2oc8_A* 3eyd_A* 3kf2_A 3kn2_A* 3knx_A* 2oc0_A* 3lox_A* 2oin_A 1rtl_A* 1rgq_A* 2f9v_A* ...
Probab=34.84 E-value=41 Score=30.85 Aligned_cols=42 Identities=21% Similarity=0.463 Sum_probs=28.6
Q ss_pred CCCCCCCeeecCCCeEEEEEeeccccCc-cccccccccHHHHHH
Q 009784 271 NSGNSGGPAFNDKGKCVGIAFQSLKHED-VENIGYVIPTPVIMH 313 (526)
Q Consensus 271 ~~G~SGGPlvn~~G~VVGI~~~~~~~~~-~~~~~~aIP~~~i~~ 313 (526)
..|.||+||+...|++|||-....-..+ ....-| +|.+.+..
T Consensus 146 ykGssgaPllCe~gh~vGly~~~VC~rG~ik~~~f-~p~e~~~~ 188 (200)
T 2o8m_A 146 LKGSAGGPLLCPAGHAVGLFRAAVCTRGVAKAVDF-IPVENLET 188 (200)
T ss_dssp TTTCTTCEEECTTSCEEEEEEEEEEETTEEEEEEE-EEHHHHHH
T ss_pred EeCCCCCceeccCCceeeEEEEEEecCCceeeeEe-eecccccc
Confidence 5788999999999999998544221112 234455 78876654
No 358
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=34.11 E-value=1.7e+02 Score=24.39 Aligned_cols=85 Identities=8% Similarity=-0.033 Sum_probs=50.7
Q ss_pred CCCEEEEEEEECCEEEEEEEEecccccccCCCC-CCCCCceEEEeeEEEEeccccceeeeeeeecc--hhhhcc-ccccc
Q 009784 409 TGDSAAVKVLRDSKILNFNITLATHRRLIPSHN-KGRPPSYYIIAGFVFSRCLYLISVLSMERIMN--MKLRSS-FWTSS 484 (526)
Q Consensus 409 ~G~~v~l~v~R~G~~~~~~v~l~~~~~~~p~~~-~~~~p~~~i~gG~~f~~lt~~~~~~~~~~i~~--~~~~sg-~~~~~ 484 (526)
+-+++.+...++++.....+++........... .....-+.+.+|.... .....+.+..+.+ .+.++| |+.||
T Consensus 12 ~~~p~~~~~~~~~~~~i~~v~l~~~~~~~~i~k~~~~~lG~~i~gg~~~~---~~~~gv~V~~V~~gspA~~aG~L~~GD 88 (131)
T 1wfg_A 12 DKHPVTWQPSKDGDRLIGRILLNKRLKDGSVPRDSGAMLGLKVVGGKMTE---SGRLCAFITKVKKGSLADTVGHLRPGD 88 (131)
T ss_dssp CCCSCEEEECSSSSEEEEEEEEECSCTTSCCCSCSCTTTTEEEEEEEECS---SSCEEEEEEEECTTSHHHHTSCCCTTC
T ss_pred CCCCCcccCCCCCCceeeEEEEeccceeEEEecCCCCCCCEEEecCccCC---CCCCCEEEEEECCCChHHHcCCCCCCC
Confidence 455678888888888877877776532222111 1122233333333221 1123455666665 556899 99999
Q ss_pred eeeeecccchhh
Q 009784 485 CIQCHNCQMSSL 496 (526)
Q Consensus 485 ~~~~~~~~~~~~ 496 (526)
.|...|.+-...
T Consensus 89 ~Il~ing~~v~~ 100 (131)
T 1wfg_A 89 EVLEWNGRLLQG 100 (131)
T ss_dssp EEEEETTEECTT
T ss_pred EEEEECCEECCC
Confidence 999999976654
No 359
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=33.91 E-value=1.3e+02 Score=23.22 Aligned_cols=48 Identities=6% Similarity=-0.072 Sum_probs=30.0
Q ss_pred eEEEEeccccceeeeeeeecc--hhhhcc-ccccceeeeecccchhhhHHHH
Q 009784 453 GFVFSRCLYLISVLSMERIMN--MKLRSS-FWTSSCIQCHNCQMSSLLWCLR 501 (526)
Q Consensus 453 G~~f~~lt~~~~~~~~~~i~~--~~~~sg-~~~~~~~~~~~~~~~~~~~~~~ 501 (526)
|+.+...... ..+.+..+.+ .+.++| |..||.|...|.+-........
T Consensus 19 G~~~~~~~~~-~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~ 69 (95)
T 2vwr_A 19 GIKLVRRTDE-PGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPEL 69 (95)
T ss_dssp CEEEEECSSS-CSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHH
T ss_pred cEEEEeccCC-CCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHH
Confidence 4444433322 2345555555 456799 9999999999997665543333
No 360
>2eqj_A Metal-response element-binding transcription factor 2; structure genomics,tudor domain, zinc-regulated factor 1, ZIRF1; NMR {Mus musculus}
Probab=30.88 E-value=1.3e+02 Score=22.55 Aligned_cols=37 Identities=22% Similarity=0.199 Sum_probs=31.5
Q ss_pred CCCCeEEEEEcCCCcEEEEEEEEeccCCCeEEEEeccc
Q 009784 169 EHYTQVKLKKRGSDTKYLATVLAIGTECDIAMLTVEDD 206 (526)
Q Consensus 169 ~~~~~i~V~~~~~g~~~~a~vv~~d~~~DlAlLkv~~~ 206 (526)
...+.+..+.. ||..|+|+|+.++....-+++++...
T Consensus 15 ~vGddVLA~wt-DGl~Y~gtI~~V~~~~gtC~V~F~D~ 51 (66)
T 2eqj_A 15 EEGQDVLARWS-DGLFYLGTIKKINILKQSCFIIFEDS 51 (66)
T ss_dssp CTTCEEEEECT-TSCEEEEEEEEEETTTTEEEEEETTT
T ss_pred cCCCEEEEEEc-cCcEEEeEEEEEccCCcEEEEEEccC
Confidence 34566777775 99999999999999999999999865
No 361
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=30.03 E-value=45 Score=26.99 Aligned_cols=39 Identities=13% Similarity=0.031 Sum_probs=29.1
Q ss_pred eeeeeeecc--hhhhcc-ccccceeeeecccchhhhHHHHHH
Q 009784 465 VLSMERIMN--MKLRSS-FWTSSCIQCHNCQMSSLLWCLRCL 503 (526)
Q Consensus 465 ~~~~~~i~~--~~~~sg-~~~~~~~~~~~~~~~~~~~~~~~~ 503 (526)
.+.+..+.+ .+.++| |+.||.|...|.+-....|.....
T Consensus 26 gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~ 67 (106)
T 2la8_A 26 GCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCY 67 (106)
T ss_dssp SEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHH
T ss_pred CEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 345566655 456899 999999999999888776655443
No 362
>1i4k_A Putative snRNP SM-like protein; core snRNP domain, RNA binding protein; HET: CIT; 2.50A {Archaeoglobus fulgidus} SCOP: b.38.1.1 PDB: 1i5l_A*
Probab=29.88 E-value=1.4e+02 Score=22.50 Aligned_cols=33 Identities=12% Similarity=0.305 Sum_probs=29.1
Q ss_pred CeEEEEEcCCCcEEEEEEEEeccCCCeEEEEecc
Q 009784 172 TQVKLKKRGSDTKYLATVLAIGTECDIAMLTVED 205 (526)
Q Consensus 172 ~~i~V~~~~~g~~~~a~vv~~d~~~DlAlLkv~~ 205 (526)
..+.|.+. +|+.+.+++.++|...++.|=....
T Consensus 15 ~~V~V~L~-~g~~~~G~L~~~D~~mNlvL~d~~e 47 (77)
T 1i4k_A 15 SPVIVRLK-GGREFRGTLDGYDIHMNLVLLDAEE 47 (77)
T ss_dssp SEEEEEET-TSCEEEEEEEEECTTCCEEEEEEEE
T ss_pred CEEEEEEc-CCCEEEEEEEEEcCCCCeEEeeEEE
Confidence 57899997 8999999999999999998877654
No 363
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=29.82 E-value=57 Score=24.84 Aligned_cols=23 Identities=22% Similarity=0.495 Sum_probs=19.3
Q ss_pred EEEEEEEECCEEEEEEEEecccc
Q 009784 412 SAAVKVLRDSKILNFNITLATHR 434 (526)
Q Consensus 412 ~v~l~v~R~G~~~~~~v~l~~~~ 434 (526)
.+++++.|+|++.++.+.+....
T Consensus 7 ditikiqrdgqeieidirvstgk 29 (96)
T 2jvf_A 7 DITIKIQRDGQEIEIDIRVSTGK 29 (96)
T ss_dssp EEEEEEEETTEEEEEEEECCSSS
T ss_pred EEEEEEeeCCeEEEEEEEEcccH
Confidence 58899999999999998876543
No 364
>1z8r_A Coxsackievirus B4 polyprotein; beta barrel coordinated zinc ION, hydrolase; NMR {Human coxsackievirus B4}
Probab=29.82 E-value=61 Score=28.83 Aligned_cols=30 Identities=17% Similarity=0.227 Sum_probs=23.9
Q ss_pred EEEEcccCCCCCCCCeeecCCCeEEEEEeec
Q 009784 263 GLQIDAAINSGNSGGPAFNDKGKCVGIAFQS 293 (526)
Q Consensus 263 ~i~~da~i~~G~SGGPlvn~~G~VVGI~~~~ 293 (526)
++.......||+=||.|... .-||||++++
T Consensus 114 vl~~~G~~epGDCGG~L~C~-HGviGivTaG 143 (166)
T 1z8r_A 114 VLLATGFSEPGDAGGILRCE-HGVIGLVTMG 143 (166)
T ss_dssp EEEEECSSSCCCCBSEEECS-SSEEEEEEEE
T ss_pred EEEEecCCCCCCCCceeeeC-CCceEEEecC
Confidence 34455678899999999985 5599999985
No 365
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=29.18 E-value=79 Score=24.00 Aligned_cols=36 Identities=11% Similarity=-0.073 Sum_probs=25.4
Q ss_pred eeeeeecc--hhhh-ccccccceeeeecccchhhhHHHH
Q 009784 466 LSMERIMN--MKLR-SSFWTSSCIQCHNCQMSSLLWCLR 501 (526)
Q Consensus 466 ~~~~~i~~--~~~~-sg~~~~~~~~~~~~~~~~~~~~~~ 501 (526)
+.+..+.+ .+.+ +||+.||.|...|.+-.....+..
T Consensus 30 ~~V~~V~~gspA~~~agl~~GD~I~~vng~~v~~~~~~~ 68 (87)
T 4e34_A 30 ILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKE 68 (87)
T ss_dssp EEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHH
T ss_pred EEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHH
Confidence 45566665 4456 699999999999997665543333
No 366
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.81 E-value=58 Score=25.69 Aligned_cols=45 Identities=11% Similarity=-0.052 Sum_probs=31.6
Q ss_pred eEEEEeccccceeeeeeeecc--hhhhccccccceeeeecccchhhh
Q 009784 453 GFVFSRCLYLISVLSMERIMN--MKLRSSFWTSSCIQCHNCQMSSLL 497 (526)
Q Consensus 453 G~~f~~lt~~~~~~~~~~i~~--~~~~sg~~~~~~~~~~~~~~~~~~ 497 (526)
|+.+...+.....+.+..+.+ .+.++||+.||+|...|.+-....
T Consensus 25 G~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~ 71 (100)
T 2eeh_A 25 GFSVRGGSEHGLGIFVSKVEEGSSAERAGLCVGDKITEVNGLSLEST 71 (100)
T ss_dssp SEEEECCTTTTCCEEEEEECTTSHHHHHTCCSSCEEEEETTEECSSC
T ss_pred cEEEEccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCC
Confidence 666666544344556666655 456899999999999998665553
No 367
>1h64_1 SnRNP SM-like protein; SM fold, spliceosome, snRNP core; 1.9A {Pyrococcus abyssi} SCOP: b.38.1.1 PDB: 1m8v_A*
Probab=28.52 E-value=88 Score=23.59 Aligned_cols=33 Identities=6% Similarity=0.159 Sum_probs=28.9
Q ss_pred CeEEEEEcCCCcEEEEEEEEeccCCCeEEEEecc
Q 009784 172 TQVKLKKRGSDTKYLATVLAIGTECDIAMLTVED 205 (526)
Q Consensus 172 ~~i~V~~~~~g~~~~a~vv~~d~~~DlAlLkv~~ 205 (526)
..+.|.+. +|+.+.+++.++|...++.|=....
T Consensus 15 ~~V~V~l~-~g~~~~G~L~~~D~~mNlvL~d~~e 47 (75)
T 1h64_1 15 KDVLVILK-KGFEFRGRLIGYDIHLNVVLADAEM 47 (75)
T ss_dssp SEEEEEET-TSEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CEEEEEEC-CCCEEEEEEEEEeCCCCeEEeeEEE
Confidence 57889997 8999999999999999998877654
No 368
>1d3b_B Protein (small nuclear ribonucleoprotein associat B); snRNP, splicing, core snRNP domain, systemic lupus eryth SLE, RNA binding protein; HET: CIT; 2.00A {Homo sapiens} SCOP: b.38.1.1 PDB: 2y9a_A 2y9b_A 2y9c_A 2y9d_A
Probab=28.02 E-value=82 Score=24.78 Aligned_cols=33 Identities=6% Similarity=0.213 Sum_probs=29.1
Q ss_pred CeEEEEEcCCCcEEEEEEEEeccCCCeEEEEecc
Q 009784 172 TQVKLKKRGSDTKYLATVLAIGTECDIAMLTVED 205 (526)
Q Consensus 172 ~~i~V~~~~~g~~~~a~vv~~d~~~DlAlLkv~~ 205 (526)
..+.|.+. +|+.+.+++.++|...+|.|=....
T Consensus 15 k~V~V~l~-~gr~~~G~L~~~D~~mNlvL~d~~E 47 (91)
T 1d3b_B 15 YRMRCILQ-DGRIFIGTFKAFDKHMNLILCDCDE 47 (91)
T ss_dssp SEEEEEET-TCCEEEEEEEECCTTCCEEEEEEEE
T ss_pred CcEEEEEC-CCeEEEEEEEEECCCCeEEecCEEE
Confidence 56899997 9999999999999999999877654
No 369
>3s6n_G Small nuclear ribonucleoprotein G; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2y9b_G 2y9c_G 2y9d_G 3cw1_G 3pgw_G* 2y9a_G
Probab=27.99 E-value=97 Score=23.54 Aligned_cols=34 Identities=6% Similarity=0.049 Sum_probs=29.2
Q ss_pred CeEEEEEcCCCcEEEEEEEEeccCCCeEEEEeccc
Q 009784 172 TQVKLKKRGSDTKYLATVLAIGTECDIAMLTVEDD 206 (526)
Q Consensus 172 ~~i~V~~~~~g~~~~a~vv~~d~~~DlAlLkv~~~ 206 (526)
..+.|.+. +|+.+.+++.++|...++.|=.....
T Consensus 15 k~V~V~Lk-~gr~~~G~L~~~D~~mNlvL~~~~e~ 48 (76)
T 3s6n_G 15 KKLSLKLN-GGRHVQGILRGFDPFMNLVIDECVEM 48 (76)
T ss_dssp CEEEEEET-TTEEEEEEEEEECTTCCEEEEEEEEC
T ss_pred CeEEEEEC-CCcEEEEEEEEECCcceEEEeceEEE
Confidence 46889997 89999999999999999988776543
No 370
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=27.97 E-value=83 Score=24.98 Aligned_cols=38 Identities=5% Similarity=-0.184 Sum_probs=26.3
Q ss_pred eeeeeeecc--hhhhcc--ccccceeeeecccchhhhHHHHH
Q 009784 465 VLSMERIMN--MKLRSS--FWTSSCIQCHNCQMSSLLWCLRC 502 (526)
Q Consensus 465 ~~~~~~i~~--~~~~sg--~~~~~~~~~~~~~~~~~~~~~~~ 502 (526)
.+.+..+.+ .+.++| |..||.|...|.+-.....+...
T Consensus 44 ~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~ 85 (107)
T 3nfk_A 44 PVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQV 85 (107)
T ss_dssp EEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHH
T ss_pred CeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHH
Confidence 345666665 556899 99999999999876654433333
No 371
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=27.57 E-value=51 Score=26.05 Aligned_cols=48 Identities=8% Similarity=-0.074 Sum_probs=30.7
Q ss_pred eEEEEeccccceeeeeeeecc--hhhhccccccceeeeecccchhhhHHH
Q 009784 453 GFVFSRCLYLISVLSMERIMN--MKLRSSFWTSSCIQCHNCQMSSLLWCL 500 (526)
Q Consensus 453 G~~f~~lt~~~~~~~~~~i~~--~~~~sg~~~~~~~~~~~~~~~~~~~~~ 500 (526)
|+.+.........+.+..+.+ .+.++||+.||+|...|.+-.....++
T Consensus 24 G~~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~ 73 (101)
T 1uez_A 24 GFSIRGGSEHGVGIYVSLVEPGSLAEKEGLRVGDQILRVNDKSLARVTHA 73 (101)
T ss_dssp SEEEEECTTTTCCEEEEEECTTSHHHHHTCCSSCCEEEETTEECSSCCHH
T ss_pred cEEEeCCCCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHH
Confidence 555544432223455555555 456899999999999999766554443
No 372
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=27.42 E-value=85 Score=25.89 Aligned_cols=49 Identities=8% Similarity=-0.178 Sum_probs=32.5
Q ss_pred eEEEEecccc--ceeeeeeeecc--hhhhcc-ccccceeeeecccchhhhHHHH
Q 009784 453 GFVFSRCLYL--ISVLSMERIMN--MKLRSS-FWTSSCIQCHNCQMSSLLWCLR 501 (526)
Q Consensus 453 G~~f~~lt~~--~~~~~~~~i~~--~~~~sg-~~~~~~~~~~~~~~~~~~~~~~ 501 (526)
|+.+..++.. ...+.+..+.+ .+.++| |+.||+|...|.+-..+...|.
T Consensus 35 G~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~ 88 (124)
T 1wh1_A 35 GLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQNREEAV 88 (124)
T ss_dssp CEEEECCCCCSSCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCCSHHHHH
T ss_pred cEEEEecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCHHHHH
Confidence 6666655421 23445555654 556899 9999999999997776644443
No 373
>1th7_A SnRNP-2, small nuclear riboprotein protein; archaea, SM protein, SM fold, SS-SM1, RNA binding protein; 1.68A {Sulfolobus solfataricus} SCOP: b.38.1.1
Probab=27.24 E-value=95 Score=23.87 Aligned_cols=34 Identities=9% Similarity=0.132 Sum_probs=29.4
Q ss_pred CeEEEEEcCCCcEEEEEEEEeccCCCeEEEEeccc
Q 009784 172 TQVKLKKRGSDTKYLATVLAIGTECDIAMLTVEDD 206 (526)
Q Consensus 172 ~~i~V~~~~~g~~~~a~vv~~d~~~DlAlLkv~~~ 206 (526)
..+.|.+. +|+.+.+++.++|...++.|=.....
T Consensus 20 ~~V~V~l~-~g~~~~G~L~~~D~~mNlvL~d~~e~ 53 (81)
T 1th7_A 20 NLVLVKLK-GNKEVRGMLRSYDQHMNLVLSDSEEI 53 (81)
T ss_dssp SEEEEEET-TTEEEEEEEEEECTTCCEEEEEEEEE
T ss_pred CeEEEEEc-CCcEEEEEEEEEcCCCCEEEccEEEE
Confidence 56889997 99999999999999999988777643
No 374
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=25.99 E-value=1.2e+02 Score=22.92 Aligned_cols=32 Identities=6% Similarity=0.050 Sum_probs=24.1
Q ss_pred eeeeeeecc--hhhhccccccceeeeecccchhh
Q 009784 465 VLSMERIMN--MKLRSSFWTSSCIQCHNCQMSSL 496 (526)
Q Consensus 465 ~~~~~~i~~--~~~~sg~~~~~~~~~~~~~~~~~ 496 (526)
.+.+..+.+ .+.++||+.||.|...|.+-...
T Consensus 27 g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~ 60 (87)
T 2pa1_A 27 PIMVTKVAERGKAKDADLRPGDIIVAINGESAEG 60 (87)
T ss_dssp EEEEEEECSSSHHHHTTCCTTCEEEEETTEESTT
T ss_pred CEEEEEECCCChHHHcCCCCCCEEEEECCEECCC
Confidence 445556655 45689999999999999866655
No 375
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=25.82 E-value=96 Score=23.68 Aligned_cols=33 Identities=12% Similarity=0.149 Sum_probs=24.1
Q ss_pred eeeeeeecc--hhhhc-cccccceeeeecccchhhh
Q 009784 465 VLSMERIMN--MKLRS-SFWTSSCIQCHNCQMSSLL 497 (526)
Q Consensus 465 ~~~~~~i~~--~~~~s-g~~~~~~~~~~~~~~~~~~ 497 (526)
.+.+..+.+ .+.++ ||..||.|...|.+-....
T Consensus 31 g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~ 66 (90)
T 1qav_A 31 PILISKIFKGLAADQTEALFVGDAILSVNGEDLSSA 66 (90)
T ss_dssp EEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTC
T ss_pred CEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCC
Confidence 344555555 45677 9999999999999766554
No 376
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=25.76 E-value=80 Score=25.06 Aligned_cols=44 Identities=9% Similarity=-0.045 Sum_probs=28.1
Q ss_pred eEEEEeccccceeeeeeeecc--hhhhccccccceeeeecccchhh
Q 009784 453 GFVFSRCLYLISVLSMERIMN--MKLRSSFWTSSCIQCHNCQMSSL 496 (526)
Q Consensus 453 G~~f~~lt~~~~~~~~~~i~~--~~~~sg~~~~~~~~~~~~~~~~~ 496 (526)
|+.+..-......+.+..+.+ .+.++||+.||+|...|..-...
T Consensus 30 G~~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~ 75 (104)
T 1wi2_A 30 GFNIRGGKASQLGIFISKVIPDSDAHRAGLQEGDQVLAVNDVDFQD 75 (104)
T ss_dssp SEEEECCSSSCCCCEEEEECTTSHHHHHTCCTTCEEEEETTEECSS
T ss_pred cEEEEcccCCCCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCC
Confidence 444443222223445556655 45679999999999999865554
No 377
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=25.70 E-value=1.2e+02 Score=23.08 Aligned_cols=33 Identities=12% Similarity=0.123 Sum_probs=24.5
Q ss_pred eeeeeeecc--hhhhccccccceeeeecccchhhh
Q 009784 465 VLSMERIMN--MKLRSSFWTSSCIQCHNCQMSSLL 497 (526)
Q Consensus 465 ~~~~~~i~~--~~~~sg~~~~~~~~~~~~~~~~~~ 497 (526)
.+.+..+.+ .+.++||+.||.|...|.+-....
T Consensus 28 ~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~ 62 (89)
T 2q3g_A 28 PLSISRLTPGGKAAQAGVAVGDWVLSIDGENAGSL 62 (89)
T ss_dssp EEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGC
T ss_pred CEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCC
Confidence 345555555 456899999999999999776643
No 378
>1mgq_A SM-like protein; LSM, RNA-binding, archea, RNA binding protein; 1.70A {Methanothermobacterthermautotrophicus} SCOP: b.38.1.1 PDB: 1i81_A 1loj_A* 1jbm_A 1jri_A
Probab=25.59 E-value=1.1e+02 Score=23.79 Aligned_cols=33 Identities=12% Similarity=0.306 Sum_probs=29.0
Q ss_pred CeEEEEEcCCCcEEEEEEEEeccCCCeEEEEecc
Q 009784 172 TQVKLKKRGSDTKYLATVLAIGTECDIAMLTVED 205 (526)
Q Consensus 172 ~~i~V~~~~~g~~~~a~vv~~d~~~DlAlLkv~~ 205 (526)
..+.|.+. +|+.+.+++.++|...++.|=....
T Consensus 26 ~~V~V~Lk-~g~~~~G~L~~~D~~mNlvL~d~~e 58 (83)
T 1mgq_A 26 SPVIIKLK-GDREFRGVLKSFDLHMNLVLNDAEE 58 (83)
T ss_dssp SEEEEEET-TTEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CEEEEEEc-CCcEEEEEEEEECCCceeEEccEEE
Confidence 47899997 8999999999999999998877654
No 379
>1d3b_A Protein (small nuclear ribonucleoprotein SM D3); snRNP, splicing, core snRNP domain, systemic lupus eryth SLE, RNA binding protein; HET: CIT; 2.00A {Homo sapiens} SCOP: b.38.1.1
Probab=25.06 E-value=1.2e+02 Score=22.90 Aligned_cols=33 Identities=9% Similarity=0.144 Sum_probs=29.0
Q ss_pred CeEEEEEcCCCcEEEEEEEEeccCCCeEEEEecc
Q 009784 172 TQVKLKKRGSDTKYLATVLAIGTECDIAMLTVED 205 (526)
Q Consensus 172 ~~i~V~~~~~g~~~~a~vv~~d~~~DlAlLkv~~ 205 (526)
..+.|.+. +|+.|.+++..+|...++.|=.+..
T Consensus 16 ~~V~VeLk-~g~~~~G~L~~~D~~MNl~L~~~~e 48 (75)
T 1d3b_A 16 HIVTCETN-TGEVYRGKLIEAEDNMNCQMSNITV 48 (75)
T ss_dssp SEEEEEET-TSCEEEEEEEEECTTCCEEEEEEEE
T ss_pred CEEEEEEC-CCcEEEEEEEEEccceeEEEEeEEE
Confidence 57899997 8999999999999999998877654
No 380
>1y96_A Gemin6, SIP2, GEM-associated protein 6; SM fold, protein complex, RNA binding protein; 2.00A {Homo sapiens}
Probab=24.59 E-value=1.8e+02 Score=23.00 Aligned_cols=32 Identities=16% Similarity=0.328 Sum_probs=27.6
Q ss_pred CeEEEEEcCCCcEEEEEEEEecc-CCCeEEEEec
Q 009784 172 TQVKLKKRGSDTKYLATVLAIGT-ECDIAMLTVE 204 (526)
Q Consensus 172 ~~i~V~~~~~g~~~~a~vv~~d~-~~DlAlLkv~ 204 (526)
..+.|++. ||+.|.+.+..+|+ ...+.|+...
T Consensus 18 KeV~V~l~-dg~~y~G~l~tvDp~s~sIvL~n~~ 50 (86)
T 1y96_A 18 KEVRVTAS-EKNEYKGWVLTTDPVSANIVLVNFL 50 (86)
T ss_dssp CEEEEEET-TTEEEEEEEEEECTTTCCEEEEEEC
T ss_pred CEEEEEEc-CCCEEEEEEEEECCCceEEEEeecc
Confidence 57899997 99999999999995 5788888873
No 381
>1i8f_A Putative snRNP SM-like protein; beta barrel-like SMAP monomers form 35-stranded beta-sheet I heptamer, structural genomics; 1.75A {Pyrobaculum aerophilum} SCOP: b.38.1.1 PDB: 1lnx_A*
Probab=24.00 E-value=1.5e+02 Score=22.75 Aligned_cols=33 Identities=15% Similarity=0.234 Sum_probs=28.7
Q ss_pred CeEEEEEcCCCcEEEEEEEEeccCCCeEEEEecc
Q 009784 172 TQVKLKKRGSDTKYLATVLAIGTECDIAMLTVED 205 (526)
Q Consensus 172 ~~i~V~~~~~g~~~~a~vv~~d~~~DlAlLkv~~ 205 (526)
..+.|.+. +|+.+.+++.++|...++.|=....
T Consensus 22 ~~V~V~l~-~g~~~~G~L~~~D~~mNlvL~d~~e 54 (81)
T 1i8f_A 22 KQVLVKLR-DSHEIRGILRSFDQHVNLLLEDAEE 54 (81)
T ss_dssp SEEEEEEG-GGEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CeEEEEEc-CCcEEEEEEEEEcCCCeeEEccEEE
Confidence 47899997 8999999999999999998876654
No 382
>4emg_A Probable U6 snRNA-associated SM-like protein LSM3; SM fold, mRNA decay, LSM proteins, RNA binding protein; 2.70A {Schizosaccharomyces pombe}
Probab=23.76 E-value=1.2e+02 Score=24.24 Aligned_cols=33 Identities=18% Similarity=0.208 Sum_probs=29.0
Q ss_pred CeEEEEEcCCCcEEEEEEEEeccCCCeEEEEecc
Q 009784 172 TQVKLKKRGSDTKYLATVLAIGTECDIAMLTVED 205 (526)
Q Consensus 172 ~~i~V~~~~~g~~~~a~vv~~d~~~DlAlLkv~~ 205 (526)
..+.|.+. +|+.+.+++.++|...++.|=....
T Consensus 20 ~~V~V~l~-~gr~~~G~L~~~D~~mNlvL~d~~E 52 (93)
T 4emg_A 20 EIVYVKLR-GDRELNGRLHAYDEHLNMVLGDAEE 52 (93)
T ss_dssp SEEEEEET-TTEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CEEEEEEC-CCcEEEEEEEEECCcccEEeecEEE
Confidence 57899997 8999999999999999998877654
No 383
>1ljo_A Archaeal SM-like protein AF-SM2; snRNP, core snRNP domain, RNA binding protein, unknown F; 1.95A {Archaeoglobus fulgidus} SCOP: b.38.1.1
Probab=23.41 E-value=1.3e+02 Score=22.71 Aligned_cols=33 Identities=0% Similarity=0.209 Sum_probs=28.6
Q ss_pred CeEEEEEcCCC-cEEEEEEEEeccCCCeEEEEecc
Q 009784 172 TQVKLKKRGSD-TKYLATVLAIGTECDIAMLTVED 205 (526)
Q Consensus 172 ~~i~V~~~~~g-~~~~a~vv~~d~~~DlAlLkv~~ 205 (526)
..+.|.+. +| +.+.+++.++|...++.|=....
T Consensus 16 ~~v~V~lk-~g~~~~~G~L~~~D~~mNlvL~d~~e 49 (77)
T 1ljo_A 16 KIIRVEMK-GEENQLVGKLEGVDDYMNLYLTNAME 49 (77)
T ss_dssp SEEEEEET-TCSSEEEEEEEEECTTCCEEEEEEEE
T ss_pred CEEEEEEe-CCCEEEEEEEEEECCcceEEEeeEEE
Confidence 56888897 88 99999999999999998877654
No 384
>4emk_C U6 snRNA-associated SM-like protein LSM7; SM fold, mRNA decay and PRE-mRNA splicing, LSM proteins, RNA protein; 2.30A {Schizosaccharomyces pombe} PDB: 3swn_C
Probab=22.16 E-value=1.3e+02 Score=25.01 Aligned_cols=33 Identities=6% Similarity=0.127 Sum_probs=29.0
Q ss_pred CeEEEEEcCCCcEEEEEEEEeccCCCeEEEEecc
Q 009784 172 TQVKLKKRGSDTKYLATVLAIGTECDIAMLTVED 205 (526)
Q Consensus 172 ~~i~V~~~~~g~~~~a~vv~~d~~~DlAlLkv~~ 205 (526)
..+.|.+. +|+.+.+.+.++|...+|.|=....
T Consensus 34 k~V~V~L~-dGr~~~G~L~~fD~~mNLVL~d~~E 66 (113)
T 4emk_C 34 QRIQATFT-GGRQITGILKGFDQLMNLVLDDVEE 66 (113)
T ss_dssp SEEEEEET-TSCEEEEEEEEECTTCCEEEEEEEE
T ss_pred CcEEEEEe-CCeEEEEEEEEEcCcccEEEeeEEE
Confidence 57889997 8999999999999999998877654
No 385
>2m0o_A PHD finger protein 1; tudor domain, H3K36ME3 binding, peptide binding protein; HET: M3L; NMR {Homo sapiens}
Probab=22.14 E-value=90 Score=24.16 Aligned_cols=36 Identities=19% Similarity=0.328 Sum_probs=29.6
Q ss_pred CCeEEEEEcCCCcEEEEEEEEeccCCCeEEEEecccc
Q 009784 171 YTQVKLKKRGSDTKYLATVLAIGTECDIAMLTVEDDE 207 (526)
Q Consensus 171 ~~~i~V~~~~~g~~~~a~vv~~d~~~DlAlLkv~~~~ 207 (526)
.+++.++.. ||..|.++|+.++....-++++++...
T Consensus 30 GeDVLarws-DGlfYLGTI~kV~~~~e~ClV~F~D~S 65 (79)
T 2m0o_A 30 GQDVLARWT-DGLLYLGTIKKVDSAREVCLVQFEDDS 65 (79)
T ss_dssp TCEEEBCCT-TSCCCEEEEEEEETTTTEEEEEETTSC
T ss_pred CCEEEEEec-CCCEEeEEEEEeccCCCEEEEEEcCCC
Confidence 345666664 999999999999999999999998753
No 386
>1b34_B Protein (small nuclear ribonucleoprotein SM D2); snRNP, splicing, spliceosome, core snRNP domain, systemi erythematosus, SLE, RNA binding protein; 2.50A {Homo sapiens} SCOP: b.38.1.1 PDB: 2y9a_C 2y9b_C 2y9c_C 2y9d_C 3cw1_C 3pgw_Y* 3s6n_B
Probab=22.12 E-value=1.2e+02 Score=25.18 Aligned_cols=34 Identities=29% Similarity=0.495 Sum_probs=29.8
Q ss_pred CCeEEEEEcCCCcEEEEEEEEeccCCCeEEEEecc
Q 009784 171 YTQVKLKKRGSDTKYLATVLAIGTECDIAMLTVED 205 (526)
Q Consensus 171 ~~~i~V~~~~~g~~~~a~vv~~d~~~DlAlLkv~~ 205 (526)
...+.|.+. +|+.+.+++.++|...++.|=.+..
T Consensus 39 ~k~V~V~Lk-~gr~~~G~L~~fD~~mNlvL~d~~E 72 (118)
T 1b34_B 39 NTQVLINCR-NNKKLLGRVKAFDRHCNMVLENVKE 72 (118)
T ss_dssp TCEEEEEET-TSCEEEEEEEEECTTCCEEEEEEEE
T ss_pred CcEEEEEEC-CCcEEEEEEEEeCCceEEEEeCEEE
Confidence 367999997 8999999999999999999877764
No 387
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=22.08 E-value=1.3e+02 Score=22.97 Aligned_cols=34 Identities=12% Similarity=0.124 Sum_probs=25.1
Q ss_pred eeeeeeecc--hhhhccccccceeeeecccchhhhH
Q 009784 465 VLSMERIMN--MKLRSSFWTSSCIQCHNCQMSSLLW 498 (526)
Q Consensus 465 ~~~~~~i~~--~~~~sg~~~~~~~~~~~~~~~~~~~ 498 (526)
.+.+..+.+ .+.++||+.||+|...|.+-.....
T Consensus 28 g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~ 63 (91)
T 2pkt_A 28 PLAISRVTPGSKAALANLCIGDVITAIDGENTSNMT 63 (91)
T ss_dssp EEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCC
T ss_pred CeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCC
Confidence 445566655 4567999999999999987665544
No 388
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=22.07 E-value=38 Score=29.40 Aligned_cols=22 Identities=27% Similarity=0.413 Sum_probs=18.9
Q ss_pred CCCCCCeeecCCCeEEEEEeec
Q 009784 272 SGNSGGPAFNDKGKCVGIAFQS 293 (526)
Q Consensus 272 ~G~SGGPlvn~~G~VVGI~~~~ 293 (526)
.+-++-|++|.+|+++|+++..
T Consensus 47 ~~~~~~pVvd~~g~lvGiit~~ 68 (170)
T 4esy_A 47 HQIGCAPVVDQNGHLVGIITES 68 (170)
T ss_dssp TTCSEEEEECTTSCEEEEEEGG
T ss_pred cCCeEEEEEcCCccEEEEEEHH
Confidence 5678899999999999999753
No 389
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=21.95 E-value=55 Score=25.19 Aligned_cols=28 Identities=7% Similarity=-0.181 Sum_probs=24.0
Q ss_pred hhccccccceeeeecccchhhhHHHHHH
Q 009784 476 LRSSFWTSSCIQCHNCQMSSLLWCLRCL 503 (526)
Q Consensus 476 ~~sg~~~~~~~~~~~~~~~~~~~~~~~~ 503 (526)
.++||+.||+|...|.+-..+...++.+
T Consensus 33 ~~aGl~~GD~I~~ing~~v~~~~d~~~~ 60 (87)
T 2i6v_A 33 ESIGLQDGDMAVALNGLDLTDPNVMNTL 60 (87)
T ss_dssp HHTTCCTTCEEEEETTEETTCHHHHHHH
T ss_pred HHCCCCCCCEEEEECCEECCCHHHHHHH
Confidence 5799999999999999888887777644
No 390
>4emk_B U6 snRNA-associated SM-like protein LSM6; SM fold, mRNA decay and PRE-mRNA splicing, LSM proteins, RNA protein; 2.30A {Schizosaccharomyces pombe} PDB: 3swn_B
Probab=21.92 E-value=1e+02 Score=23.33 Aligned_cols=32 Identities=16% Similarity=0.249 Sum_probs=27.6
Q ss_pred CeEEEEEcCCCcEEEEEEEEeccCCCeEEEEec
Q 009784 172 TQVKLKKRGSDTKYLATVLAIGTECDIAMLTVE 204 (526)
Q Consensus 172 ~~i~V~~~~~g~~~~a~vv~~d~~~DlAlLkv~ 204 (526)
..+.|.+. +|+.+.+++.++|...++.|=...
T Consensus 15 k~V~V~Lk-~g~~~~G~L~~~D~~mNlvL~d~~ 46 (75)
T 4emk_B 15 KKVLIRLS-SGVDYKGILSCLDGYMNLALERTE 46 (75)
T ss_dssp SEEEEECT-TSCEEEEEEEEECTTCEEEEEEEE
T ss_pred CeEEEEEc-CCcEEEEEEEEEcCcceEEEccEE
Confidence 56888887 899999999999999988876654
No 391
>4emk_A U6 snRNA-associated SM-like protein LSM5; SM fold, mRNA decay and PRE-mRNA splicing, LSM proteins, RNA protein; 2.30A {Schizosaccharomyces pombe} PDB: 3swn_A
Probab=21.45 E-value=1.4e+02 Score=24.00 Aligned_cols=33 Identities=12% Similarity=0.303 Sum_probs=28.4
Q ss_pred CeEEEEEcCCCcEEEEEEEEeccCCCeEEEEecc
Q 009784 172 TQVKLKKRGSDTKYLATVLAIGTECDIAMLTVED 205 (526)
Q Consensus 172 ~~i~V~~~~~g~~~~a~vv~~d~~~DlAlLkv~~ 205 (526)
..+.|.+. +|+.+.+++.++|...++.|=.+..
T Consensus 31 k~V~V~Lk-~gr~~~G~L~gfD~~mNlvL~d~~E 63 (94)
T 4emk_A 31 SNLWVIMK-SEREFAGTLVGFDDYVNIVLKDVTE 63 (94)
T ss_dssp SEEEEEES-SSEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CeEEEEEC-CCcEEEEEEEEEcccCCeEeeeEEE
Confidence 46899997 8999999999999999998866654
No 392
>4a4f_A SurviVal of motor neuron-related-splicing factor; RNA binding protein; HET: 2MR; NMR {Homo sapiens} PDB: 4a4h_A*
Probab=21.44 E-value=2.4e+02 Score=20.53 Aligned_cols=35 Identities=17% Similarity=0.065 Sum_probs=27.3
Q ss_pred CCeEEEEEcCCCcEEEEEEEEeccCCCeEEEEecc
Q 009784 171 YTQVKLKKRGSDTKYLATVLAIGTECDIAMLTVED 205 (526)
Q Consensus 171 ~~~i~V~~~~~g~~~~a~vv~~d~~~DlAlLkv~~ 205 (526)
.+.+...+..||..|.|+|...+...+.+.+++..
T Consensus 12 Gd~c~A~~s~Dg~wYrA~I~~v~~~~~~~~V~fvd 46 (64)
T 4a4f_A 12 GDKCMAVWSEDGQCYEAEIEEIDEENGTAAITFAG 46 (64)
T ss_dssp TCEEEEECTTTSSEEEEEEEEEETTTTEEEEEETT
T ss_pred CCEEEEEECCCCCEEEEEEEEEcCCCCEEEEEEEe
Confidence 45566677669999999999998877777777764
No 393
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=21.35 E-value=1.6e+02 Score=23.46 Aligned_cols=44 Identities=16% Similarity=0.129 Sum_probs=29.4
Q ss_pred eEEEEecccc-ceeeeeeeecc--hhhhccccccceeeeecccchhh
Q 009784 453 GFVFSRCLYL-ISVLSMERIMN--MKLRSSFWTSSCIQCHNCQMSSL 496 (526)
Q Consensus 453 G~~f~~lt~~-~~~~~~~~i~~--~~~~sg~~~~~~~~~~~~~~~~~ 496 (526)
|+.+..++-. ...+.+..+.+ .+.++|++.||.|...|.+-...
T Consensus 23 Gf~v~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~ 69 (94)
T 3kzd_A 23 GFSLSSVEEDGIRRLYVNSVKETGLASKKGLKAGDEILEINNRAADA 69 (94)
T ss_dssp SEEEEEECSSSSCEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGG
T ss_pred CEEEEecCCCCcCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCC
Confidence 5555554321 12345555655 55789999999999999976664
No 394
>3bw1_A SMX4 protein, U6 snRNA-associated SM-like protein LSM3; RNA-binding protein, SM protein, ring, HOMO octamer, mRNA processing; 2.50A {Saccharomyces cerevisiae}
Probab=21.25 E-value=1.1e+02 Score=24.38 Aligned_cols=33 Identities=21% Similarity=0.416 Sum_probs=29.0
Q ss_pred CeEEEEEcCCCcEEEEEEEEeccCCCeEEEEecc
Q 009784 172 TQVKLKKRGSDTKYLATVLAIGTECDIAMLTVED 205 (526)
Q Consensus 172 ~~i~V~~~~~g~~~~a~vv~~d~~~DlAlLkv~~ 205 (526)
..+.|.+. +|+.+.+++.++|...++.|=....
T Consensus 21 k~V~V~Lk-~gr~~~G~L~~fD~~mNlVL~d~~E 53 (96)
T 3bw1_A 21 ERVYIKLR-GARTLVGTLQAFDSHCNIVLSDAVE 53 (96)
T ss_dssp SEEEEEEG-GGCEEEEEEEEECTTCCEEEEEEEE
T ss_pred CeEEEEEC-CCcEEEEEEEEECCCCcEEEcCEEE
Confidence 56899997 8999999999999999998877654
No 395
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=21.24 E-value=1.5e+02 Score=22.33 Aligned_cols=33 Identities=3% Similarity=0.046 Sum_probs=24.3
Q ss_pred eeeeeeecc--hhhhccccccceeeeecccchhhh
Q 009784 465 VLSMERIMN--MKLRSSFWTSSCIQCHNCQMSSLL 497 (526)
Q Consensus 465 ~~~~~~i~~--~~~~sg~~~~~~~~~~~~~~~~~~ 497 (526)
.+.+..+.+ .+.++||+.||.|...|.+-....
T Consensus 28 ~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~ 62 (88)
T 2uzc_A 28 PLTISSLKDGGKAAQANVRIGDVVLSIDGINAQGM 62 (88)
T ss_dssp EEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTC
T ss_pred CeEEEEECCCChHHHcCCCCCCEEEEECCEECCCC
Confidence 345555655 556899999999999998665543
No 396
>2e5p_A Protein PHF1, PHD finger protein 1; tudor domain, PHF1 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.82 E-value=2.5e+02 Score=21.11 Aligned_cols=37 Identities=19% Similarity=0.283 Sum_probs=31.8
Q ss_pred CCCCeEEEEEcCCCcEEEEEEEEeccCCCeEEEEeccc
Q 009784 169 EHYTQVKLKKRGSDTKYLATVLAIGTECDIAMLTVEDD 206 (526)
Q Consensus 169 ~~~~~i~V~~~~~g~~~~a~vv~~d~~~DlAlLkv~~~ 206 (526)
...+++..+.. ||..|.++|..++....-++++++..
T Consensus 11 ~eGqdVLarWs-DGlfYlGtV~kV~~~~~~ClV~FeD~ 47 (68)
T 2e5p_A 11 WEGQDVLARWT-DGLLYLGTIKKVDSAREVCLVQFEDD 47 (68)
T ss_dssp CTTCEEEEECT-TSSEEEEEEEEEETTTTEEEEEETTT
T ss_pred ccCCEEEEEec-CCcEEEeEEEEEecCCcEEEEEEccC
Confidence 44567777776 99999999999999999999999875
No 397
>3s6n_F Small nuclear ribonucleoprotein F; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2y9b_F 2y9c_F 2y9d_F 3cw1_F 3pgw_F* 2y9a_F
Probab=20.32 E-value=3.1e+02 Score=21.29 Aligned_cols=61 Identities=15% Similarity=0.181 Sum_probs=39.3
Q ss_pred CeEEEEEcCCCcEEEEEEEEeccCCCeEEEEecccccccCceeeecCCCCcCCCcEEEEeeCCC
Q 009784 172 TQVKLKKRGSDTKYLATVLAIGTECDIAMLTVEDDEFWEGVLPVEFGELPALQDAVTVVGYPIG 235 (526)
Q Consensus 172 ~~i~V~~~~~g~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~pl~l~~~~~~g~~V~~iG~p~~ 235 (526)
..+.|.+. +|+.+.+++.++|...++.|=.+.... .+-....++.-.--|+.|..++-|.+
T Consensus 17 k~V~V~Lk-~g~~~~G~L~~~D~~mNlvL~d~~e~~--~g~~~~~lg~v~IRG~nI~~i~~~d~ 77 (86)
T 3s6n_F 17 KPVMVKLK-WGMEYKGYLVSVDGYMNMQLANTEEYI--DGALSGHLGEVLIRCNNVLYIRGVEE 77 (86)
T ss_dssp SEEEEEET-TSCEEEEEEEEECTTCCEEEEEEEEEE--TTEEEEEESSEEECGGGEEEEEECC-
T ss_pred CeEEEEEc-CCeEEEEEEEEEcCceEEEEeeEEEEc--CCceeeEccEEEEeCCeEEEEEeCCc
Confidence 57899997 899999999999999999887766321 11122233322222566666665543
No 398
>1b34_A Protein (small nuclear ribonucleoprotein SM D1); snRNP, splicing, spliceosome, core snRNP domain, systemi erythematosus, SLE, RNA binding protein; 2.50A {Homo sapiens} SCOP: b.38.1.1 PDB: 2y9a_B 2y9b_B 2y9c_B 2y9d_B 3cw1_B 3pgw_X* 3s6n_A
Probab=20.26 E-value=2.5e+02 Score=23.30 Aligned_cols=61 Identities=13% Similarity=0.183 Sum_probs=40.0
Q ss_pred CeEEEEEcCCCcEEEEEEEEeccCCCeEEEEecccccccCceeeecCCCCcCCCcEEEEeeCCC
Q 009784 172 TQVKLKKRGSDTKYLATVLAIGTECDIAMLTVEDDEFWEGVLPVEFGELPALQDAVTVVGYPIG 235 (526)
Q Consensus 172 ~~i~V~~~~~g~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~pl~l~~~~~~g~~V~~iG~p~~ 235 (526)
..+.|.+. +|..|.+++..+|...++.|=.+.... ..-....++.-.--|+.|..+.-|..
T Consensus 13 k~V~V~Lk-~g~~~~G~L~~~D~~MNlvL~d~~e~~--~~~~~~~lg~v~IRG~nI~~I~~pd~ 73 (119)
T 1b34_A 13 ETVTIELK-NGTQVHGTITGVDVSMNTHLKAVKMTL--KNREPVQLETLSIRGNNIRYFILPDS 73 (119)
T ss_dssp CEEEEEET-TCCEEEEEEEEECTTCCEEEEEEEEEC--TTSCCEEEEEEEECGGGEEEEECCTT
T ss_pred CEEEEEEc-CCCEEEEEEEEEcccceEEeccEEEec--CCCceeEcceEEEcCCeEEEEEeccc
Confidence 57899997 899999999999999999887775432 11112222211112566666666655
Done!