Query 009785
Match_columns 526
No_of_seqs 477 out of 3013
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 12:57:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009785.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009785hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ihg_A RDME; flavoenzyme, anth 100.0 1.2E-47 4.1E-52 410.1 16.9 414 60-491 5-467 (535)
2 2qa1_A PGAE, polyketide oxygen 100.0 1.4E-45 4.9E-50 389.3 31.2 393 56-479 7-430 (500)
3 2qa2_A CABE, polyketide oxygen 100.0 1.4E-44 5E-49 381.6 31.9 390 59-479 11-431 (499)
4 2r0c_A REBC; flavin adenine di 100.0 1.2E-44 4E-49 387.2 21.1 399 60-479 26-482 (549)
5 1pn0_A Phenol 2-monooxygenase; 100.0 8.1E-44 2.8E-48 387.4 25.6 392 60-464 8-490 (665)
6 3rp8_A Flavoprotein monooxygen 100.0 4.2E-42 1.4E-46 354.9 33.3 357 56-432 19-386 (407)
7 2dkh_A 3-hydroxybenzoate hydro 100.0 1.3E-42 4.4E-47 377.4 24.7 394 59-464 31-478 (639)
8 3fmw_A Oxygenase; mithramycin, 100.0 1.6E-41 5.5E-46 363.0 25.7 399 59-479 48-482 (570)
9 2x3n_A Probable FAD-dependent 100.0 5.7E-41 1.9E-45 345.5 24.6 358 60-434 6-376 (399)
10 4hb9_A Similarities with proba 100.0 1.8E-39 6.3E-44 334.9 22.4 341 61-413 2-382 (412)
11 1k0i_A P-hydroxybenzoate hydro 100.0 8.9E-39 3.1E-43 328.5 23.2 375 60-451 2-388 (394)
12 3c96_A Flavin-containing monoo 100.0 8.1E-38 2.8E-42 323.0 29.4 361 59-435 3-396 (410)
13 2vou_A 2,6-dihydroxypyridine h 100.0 2.6E-37 8.9E-42 317.9 28.0 325 60-417 5-370 (397)
14 3oz2_A Digeranylgeranylglycero 100.0 5.4E-36 1.8E-40 307.1 31.3 331 59-406 3-341 (397)
15 3e1t_A Halogenase; flavoprotei 100.0 8.9E-36 3E-40 316.2 31.7 352 60-418 7-372 (512)
16 2xdo_A TETX2 protein; tetracyc 100.0 7.4E-36 2.5E-40 307.2 29.7 336 59-417 25-388 (398)
17 3atr_A Conserved archaeal prot 100.0 4.8E-36 1.6E-40 313.7 27.3 340 60-421 6-361 (453)
18 3alj_A 2-methyl-3-hydroxypyrid 100.0 1.3E-36 4.6E-41 310.6 21.7 322 60-408 11-343 (379)
19 3i3l_A Alkylhalidase CMLS; fla 100.0 5.7E-36 1.9E-40 320.6 25.3 360 56-422 19-390 (591)
20 3nix_A Flavoprotein/dehydrogen 100.0 6.4E-34 2.2E-38 294.8 30.4 337 60-406 5-350 (421)
21 3cgv_A Geranylgeranyl reductas 100.0 6.4E-34 2.2E-38 292.3 29.5 343 60-420 4-355 (397)
22 2pyx_A Tryptophan halogenase; 100.0 2.6E-31 8.9E-36 282.8 32.6 334 60-415 7-415 (526)
23 3c4a_A Probable tryptophan hyd 100.0 5.9E-33 2E-37 283.8 17.5 316 61-417 1-333 (381)
24 2gmh_A Electron transfer flavo 100.0 5.9E-31 2E-35 282.5 28.7 346 58-416 33-426 (584)
25 2weu_A Tryptophan 5-halogenase 100.0 3.4E-29 1.2E-33 265.8 31.6 340 60-427 2-419 (511)
26 2aqj_A Tryptophan halogenase, 100.0 3E-29 1E-33 267.8 28.4 325 60-414 5-398 (538)
27 2e4g_A Tryptophan halogenase; 100.0 6E-29 2E-33 265.8 30.3 330 60-416 25-431 (550)
28 3ihm_A Styrene monooxygenase A 99.9 6.1E-26 2.1E-30 235.3 22.8 321 59-411 21-374 (430)
29 2bry_A NEDD9 interacting prote 99.9 2.8E-25 9.7E-30 234.0 13.8 308 59-403 91-450 (497)
30 1yvv_A Amine oxidase, flavin-c 99.8 1.8E-17 6E-22 165.7 19.8 288 60-379 2-328 (336)
31 3ps9_A TRNA 5-methylaminomethy 99.6 1.7E-14 5.8E-19 157.7 15.0 159 59-229 271-480 (676)
32 1ryi_A Glycine oxidase; flavop 99.6 1.1E-14 3.9E-19 147.9 12.7 195 157-376 159-361 (382)
33 2qcu_A Aerobic glycerol-3-phos 99.5 1.1E-13 3.8E-18 145.8 17.2 213 158-376 145-371 (501)
34 1y56_B Sarcosine oxidase; dehy 99.5 6.7E-13 2.3E-17 134.9 19.5 198 158-376 145-354 (382)
35 3jsk_A Cypbp37 protein; octame 99.5 2.8E-13 9.5E-18 133.6 15.9 140 60-229 79-257 (344)
36 3da1_A Glycerol-3-phosphate de 99.5 7.7E-13 2.6E-17 141.1 20.6 172 60-232 18-242 (561)
37 3dme_A Conserved exported prot 99.5 1.9E-12 6.5E-17 130.5 20.9 72 158-232 146-220 (369)
38 2gag_B Heterotetrameric sarcos 99.5 3.2E-13 1.1E-17 138.3 14.8 116 158-282 170-287 (405)
39 1rp0_A ARA6, thiazole biosynth 99.5 7.4E-13 2.5E-17 129.0 16.5 140 60-229 39-197 (284)
40 3pvc_A TRNA 5-methylaminomethy 99.5 1.7E-13 5.8E-18 150.0 13.2 68 157-229 407-476 (689)
41 3kkj_A Amine oxidase, flavin-c 99.5 1.3E-12 4.5E-17 125.3 16.5 38 60-97 2-39 (336)
42 1qo8_A Flavocytochrome C3 fuma 99.4 2.4E-13 8.1E-18 145.5 11.3 165 58-229 119-318 (566)
43 3nyc_A D-arginine dehydrogenas 99.4 2.2E-12 7.5E-17 130.7 16.7 69 157-232 149-219 (381)
44 1y0p_A Fumarate reductase flav 99.4 1.5E-12 5.1E-17 139.5 15.5 165 59-229 125-323 (571)
45 2gf3_A MSOX, monomeric sarcosi 99.4 4.1E-12 1.4E-16 129.3 17.4 66 158-230 146-213 (389)
46 2oln_A NIKD protein; flavoprot 99.4 9.8E-12 3.3E-16 127.0 20.3 67 158-231 149-217 (397)
47 2cul_A Glucose-inhibited divis 99.4 6.7E-12 2.3E-16 118.3 14.8 131 60-231 3-133 (232)
48 2gjc_A Thiazole biosynthetic e 99.4 5.6E-12 1.9E-16 123.6 14.4 142 59-230 64-246 (326)
49 4at0_A 3-ketosteroid-delta4-5a 99.3 3.2E-12 1.1E-16 135.0 11.8 62 163-226 203-267 (510)
50 3v76_A Flavoprotein; structura 99.3 5E-12 1.7E-16 129.6 12.7 143 58-223 25-187 (417)
51 3dje_A Fructosyl amine: oxygen 99.3 2.1E-11 7.1E-16 126.2 16.0 62 158-224 157-222 (438)
52 2rgh_A Alpha-glycerophosphate 99.3 2.5E-10 8.4E-15 121.9 22.5 72 159-231 185-259 (571)
53 3ces_A MNMG, tRNA uridine 5-ca 99.3 3.9E-11 1.3E-15 127.5 15.8 155 60-230 28-188 (651)
54 3ka7_A Oxidoreductase; structu 99.3 2.3E-10 7.7E-15 117.8 20.8 58 162-225 196-254 (425)
55 1kf6_A Fumarate reductase flav 99.3 6.8E-11 2.3E-15 126.9 17.2 69 162-230 134-204 (602)
56 2i0z_A NAD(FAD)-utilizing dehy 99.3 2.9E-11 1E-15 125.5 13.8 153 59-232 25-211 (447)
57 1d4d_A Flavocytochrome C fumar 99.2 1.4E-11 4.8E-16 131.7 10.8 163 59-229 125-323 (572)
58 2zxi_A TRNA uridine 5-carboxym 99.2 7.6E-11 2.6E-15 124.9 15.9 152 60-229 27-186 (637)
59 4dgk_A Phytoene dehydrogenase; 99.2 3.6E-10 1.2E-14 118.9 21.1 64 163-231 222-286 (501)
60 3cp8_A TRNA uridine 5-carboxym 99.2 6E-11 2.1E-15 126.1 14.6 153 59-227 20-178 (641)
61 3nlc_A Uncharacterized protein 99.2 1E-10 3.4E-15 123.4 15.6 153 59-224 106-278 (549)
62 2gqf_A Hypothetical protein HI 99.2 4.7E-11 1.6E-15 121.9 12.5 139 59-223 3-168 (401)
63 1c0p_A D-amino acid oxidase; a 99.2 3E-10 1E-14 114.5 17.7 36 58-93 4-39 (363)
64 2ywl_A Thioredoxin reductase r 99.2 8.1E-11 2.8E-15 106.1 12.0 117 61-231 2-118 (180)
65 1chu_A Protein (L-aspartate ox 99.2 7.5E-11 2.6E-15 125.0 12.0 65 162-226 138-211 (540)
66 3nrn_A Uncharacterized protein 99.2 7.9E-10 2.7E-14 113.7 19.0 55 163-225 190-245 (421)
67 2h88_A Succinate dehydrogenase 99.2 3.3E-10 1.1E-14 121.6 16.4 62 163-225 156-219 (621)
68 2uzz_A N-methyl-L-tryptophan o 99.2 2.2E-10 7.4E-15 115.7 13.9 60 158-224 145-205 (372)
69 3c4n_A Uncharacterized protein 99.2 1E-10 3.4E-15 119.8 11.5 167 60-233 36-248 (405)
70 3i6d_A Protoporphyrinogen oxid 99.2 1.6E-10 5.5E-15 120.4 13.0 62 60-121 5-87 (470)
71 3axb_A Putative oxidoreductase 99.2 5.8E-10 2E-14 115.7 17.0 69 158-232 177-264 (448)
72 2wdq_A Succinate dehydrogenase 99.1 3.1E-10 1.1E-14 121.4 15.1 63 162-225 143-208 (588)
73 3ab1_A Ferredoxin--NADP reduct 99.1 2.9E-10 9.9E-15 114.4 12.5 127 58-231 12-139 (360)
74 3fbs_A Oxidoreductase; structu 99.1 6.2E-10 2.1E-14 108.4 14.2 113 60-225 2-114 (297)
75 2bs2_A Quinol-fumarate reducta 99.1 1.1E-09 3.7E-14 118.4 16.5 62 163-225 159-222 (660)
76 2zbw_A Thioredoxin reductase; 99.1 5.6E-10 1.9E-14 110.9 13.2 124 60-231 5-129 (335)
77 3qj4_A Renalase; FAD/NAD(P)-bi 99.1 2.5E-09 8.6E-14 106.7 17.9 36 61-96 2-40 (342)
78 4fk1_A Putative thioredoxin re 99.1 7.3E-10 2.5E-14 108.7 13.3 114 58-223 4-117 (304)
79 4a9w_A Monooxygenase; baeyer-v 99.1 6.3E-10 2.2E-14 111.2 12.8 129 60-224 3-133 (357)
80 3gyx_A Adenylylsulfate reducta 99.1 6E-10 2.1E-14 120.3 13.4 66 160-225 164-235 (662)
81 2e5v_A L-aspartate oxidase; ar 99.1 6.7E-10 2.3E-14 115.8 12.4 62 162-228 119-181 (472)
82 1jnr_A Adenylylsulfate reducta 99.0 1.5E-09 5E-14 117.6 14.7 65 161-225 150-220 (643)
83 2gv8_A Monooxygenase; FMO, FAD 99.0 2.2E-09 7.4E-14 111.4 13.2 157 60-225 6-179 (447)
84 2q0l_A TRXR, thioredoxin reduc 99.0 3.1E-09 1.1E-13 104.3 13.6 115 61-226 2-117 (311)
85 3itj_A Thioredoxin reductase 1 99.0 8E-10 2.7E-14 109.7 9.3 121 59-225 21-144 (338)
86 3g3e_A D-amino-acid oxidase; F 99.0 6.2E-09 2.1E-13 104.2 15.0 33 61-93 1-39 (351)
87 3cty_A Thioredoxin reductase; 99.0 3.2E-09 1.1E-13 104.7 12.7 115 57-224 13-127 (319)
88 1pj5_A N,N-dimethylglycine oxi 99.0 2.4E-09 8.2E-14 119.6 12.9 69 157-231 146-216 (830)
89 3lov_A Protoporphyrinogen oxid 99.0 3.4E-08 1.1E-12 103.1 20.7 62 60-121 4-82 (475)
90 3f8d_A Thioredoxin reductase ( 99.0 3.9E-09 1.3E-13 104.0 12.5 112 60-224 15-126 (323)
91 2q7v_A Thioredoxin reductase; 98.9 3.6E-09 1.2E-13 104.7 11.5 115 60-224 8-124 (325)
92 1vdc_A NTR, NADPH dependent th 98.9 1.5E-09 5.1E-14 107.8 8.7 119 60-225 8-126 (333)
93 3lzw_A Ferredoxin--NADP reduct 98.9 5.5E-09 1.9E-13 103.3 11.7 118 60-225 7-125 (332)
94 4a5l_A Thioredoxin reductase; 98.9 5E-09 1.7E-13 102.9 10.8 120 58-223 2-121 (314)
95 1w4x_A Phenylacetone monooxyge 98.9 7.8E-09 2.7E-13 109.8 12.7 140 59-225 15-156 (542)
96 3k7m_X 6-hydroxy-L-nicotine ox 98.9 2E-08 6.8E-13 103.4 14.8 36 61-96 2-37 (431)
97 2a87_A TRXR, TR, thioredoxin r 98.8 9E-09 3.1E-13 102.3 10.7 116 58-225 12-128 (335)
98 2xve_A Flavin-containing monoo 98.8 6.3E-09 2.1E-13 108.3 9.9 149 61-226 3-169 (464)
99 1trb_A Thioredoxin reductase; 98.8 7.3E-09 2.5E-13 102.1 9.4 114 60-225 5-118 (320)
100 3s5w_A L-ornithine 5-monooxyge 98.8 2.1E-08 7.1E-13 104.4 13.3 150 60-224 30-193 (463)
101 3gwf_A Cyclohexanone monooxyge 98.8 1.6E-08 5.6E-13 107.0 12.5 135 60-225 8-149 (540)
102 1fl2_A Alkyl hydroperoxide red 98.8 1.1E-08 3.7E-13 100.4 10.1 114 60-225 1-117 (310)
103 3d1c_A Flavin-containing putat 98.8 1.3E-08 4.6E-13 102.3 10.7 134 60-224 4-144 (369)
104 1ojt_A Surface protein; redox- 98.7 1.6E-08 5.6E-13 105.8 9.2 37 58-94 4-40 (482)
105 3nks_A Protoporphyrinogen oxid 98.7 4.3E-08 1.5E-12 102.3 12.3 62 61-122 3-85 (477)
106 2a8x_A Dihydrolipoyl dehydroge 98.7 6.7E-09 2.3E-13 108.2 5.6 143 60-226 3-149 (464)
107 4ap3_A Steroid monooxygenase; 98.7 3.5E-08 1.2E-12 104.6 11.0 135 59-224 20-160 (549)
108 3uox_A Otemo; baeyer-villiger 98.7 3.3E-08 1.1E-12 104.8 9.7 137 60-225 9-149 (545)
109 4gcm_A TRXR, thioredoxin reduc 98.7 7E-08 2.4E-12 94.7 11.0 33 60-92 6-38 (312)
110 1dxl_A Dihydrolipoamide dehydr 98.7 4.5E-08 1.5E-12 102.1 10.1 144 60-227 6-155 (470)
111 1v59_A Dihydrolipoamide dehydr 98.7 1.1E-08 3.9E-13 106.8 5.4 36 59-94 4-39 (478)
112 3l8k_A Dihydrolipoyl dehydroge 98.7 3.9E-08 1.3E-12 102.4 8.8 36 59-94 3-38 (466)
113 1hyu_A AHPF, alkyl hydroperoxi 98.6 7.3E-08 2.5E-12 101.8 10.7 115 58-224 210-327 (521)
114 2ivd_A PPO, PPOX, protoporphyr 98.6 8E-08 2.7E-12 100.3 10.8 63 60-122 16-93 (478)
115 3pl8_A Pyranose 2-oxidase; sub 98.6 1E-07 3.5E-12 102.5 11.7 52 176-227 273-328 (623)
116 1s3e_A Amine oxidase [flavin-c 98.6 3E-07 1E-11 97.0 15.1 61 59-119 3-79 (520)
117 2vvm_A Monoamine oxidase N; FA 98.6 3.9E-07 1.3E-11 95.6 15.8 62 60-121 39-115 (495)
118 3r9u_A Thioredoxin reductase; 98.6 1.6E-07 5.4E-12 92.0 11.7 112 60-223 4-118 (315)
119 3qfa_A Thioredoxin reductase 1 98.6 1.5E-07 5E-12 99.4 11.8 36 58-93 30-65 (519)
120 1zmd_A Dihydrolipoyl dehydroge 98.6 8.7E-08 3E-12 100.0 9.3 35 60-94 6-40 (474)
121 3h8l_A NADH oxidase; membrane 98.6 5.4E-08 1.8E-12 99.6 7.5 110 61-224 2-114 (409)
122 3urh_A Dihydrolipoyl dehydroge 98.6 6.1E-08 2.1E-12 101.7 7.0 36 59-94 24-59 (491)
123 3o0h_A Glutathione reductase; 98.6 3.6E-07 1.2E-11 95.6 12.6 56 163-224 233-289 (484)
124 3dgz_A Thioredoxin reductase 2 98.5 3.6E-07 1.2E-11 95.7 12.2 35 59-93 5-39 (488)
125 1ebd_A E3BD, dihydrolipoamide 98.5 3.7E-07 1.3E-11 94.7 11.9 33 60-92 3-35 (455)
126 2qae_A Lipoamide, dihydrolipoy 98.5 2.2E-07 7.5E-12 96.8 10.1 35 60-94 2-36 (468)
127 3g5s_A Methylenetetrahydrofola 98.5 2.7E-07 9.2E-12 91.5 10.0 115 61-189 2-125 (443)
128 1q1r_A Putidaredoxin reductase 98.5 1.7E-07 5.9E-12 96.5 9.1 36 59-94 3-40 (431)
129 3lad_A Dihydrolipoamide dehydr 98.5 2.7E-07 9.1E-12 96.4 10.2 35 60-94 3-37 (476)
130 3p1w_A Rabgdi protein; GDI RAB 98.5 1.7E-06 5.7E-11 89.3 15.7 41 56-96 16-56 (475)
131 1zk7_A HGII, reductase, mercur 98.5 5E-07 1.7E-11 94.0 11.5 34 59-92 3-36 (467)
132 3cgb_A Pyridine nucleotide-dis 98.5 1.3E-07 4.4E-12 98.8 7.0 113 61-224 37-153 (480)
133 3iwa_A FAD-dependent pyridine 98.5 3.4E-07 1.2E-11 95.4 10.1 35 60-94 3-39 (472)
134 3sx6_A Sulfide-quinone reducta 98.5 1E-07 3.5E-12 98.4 5.6 107 61-225 5-114 (437)
135 1nhp_A NADH peroxidase; oxidor 98.5 1.6E-07 5.4E-12 97.3 6.7 34 61-94 1-36 (447)
136 1xdi_A RV3303C-LPDA; reductase 98.4 5E-07 1.7E-11 94.9 9.7 34 60-93 2-38 (499)
137 3dgh_A TRXR-1, thioredoxin red 98.4 1.3E-06 4.6E-11 91.2 12.8 34 59-92 8-41 (483)
138 2cdu_A NADPH oxidase; flavoenz 98.4 2.7E-07 9.1E-12 95.7 7.1 34 61-94 1-36 (452)
139 3oc4_A Oxidoreductase, pyridin 98.4 5.7E-07 2E-11 93.2 9.5 34 61-94 3-38 (452)
140 3fpz_A Thiazole biosynthetic e 98.4 2.7E-07 9.3E-12 91.2 6.4 58 60-117 65-131 (326)
141 2hqm_A GR, grase, glutathione 98.4 7.5E-07 2.6E-11 93.0 10.1 35 59-93 10-44 (479)
142 2bc0_A NADH oxidase; flavoprot 98.4 2.6E-07 9E-12 96.8 5.9 35 60-94 35-72 (490)
143 4dna_A Probable glutathione re 98.4 1.2E-06 4E-11 91.1 10.8 33 60-92 5-37 (463)
144 3lxd_A FAD-dependent pyridine 98.3 9.4E-07 3.2E-11 90.5 9.1 36 59-94 8-45 (415)
145 3ics_A Coenzyme A-disulfide re 98.3 2E-06 7E-11 92.1 12.1 112 60-222 36-151 (588)
146 3qvp_A Glucose oxidase; oxidor 98.3 5.6E-07 1.9E-11 95.6 7.2 53 171-223 235-293 (583)
147 4b63_A L-ornithine N5 monooxyg 98.3 4.8E-06 1.6E-10 87.3 14.0 62 159-221 142-212 (501)
148 3kd9_A Coenzyme A disulfide re 98.3 1.3E-06 4.3E-11 90.5 9.2 35 60-94 3-39 (449)
149 2yqu_A 2-oxoglutarate dehydrog 98.3 5.8E-07 2E-11 93.2 6.6 34 61-94 2-35 (455)
150 3q9t_A Choline dehydrogenase a 98.3 2.7E-06 9.3E-11 90.3 11.4 52 173-224 216-271 (577)
151 2eq6_A Pyruvate dehydrogenase 98.3 4.7E-06 1.6E-10 86.6 12.7 101 61-225 170-273 (464)
152 3fg2_P Putative rubredoxin red 98.3 1.6E-06 5.4E-11 88.4 8.7 34 61-94 2-37 (404)
153 2x8g_A Thioredoxin glutathione 98.2 8.5E-06 2.9E-10 87.4 14.2 35 58-92 105-139 (598)
154 2v3a_A Rubredoxin reductase; a 98.2 8.6E-06 2.9E-10 82.3 13.1 100 60-225 145-245 (384)
155 3dk9_A Grase, GR, glutathione 98.2 2.5E-06 8.6E-11 89.0 9.3 34 59-92 19-52 (478)
156 3h28_A Sulfide-quinone reducta 98.2 3.6E-07 1.2E-11 94.1 2.7 34 61-94 3-38 (430)
157 1fec_A Trypanothione reductase 98.2 4.5E-06 1.5E-10 87.3 11.2 32 60-91 3-35 (490)
158 3t37_A Probable dehydrogenase; 98.2 7.1E-06 2.4E-10 86.6 12.7 60 163-223 211-271 (526)
159 3klj_A NAD(FAD)-dependent dehy 98.2 1.8E-06 6.1E-11 87.4 7.3 36 60-95 9-44 (385)
160 4gut_A Lysine-specific histone 98.2 5.4E-06 1.9E-10 91.0 11.2 38 60-97 336-373 (776)
161 4gde_A UDP-galactopyranose mut 98.2 7.7E-07 2.6E-11 93.6 4.1 39 60-98 10-49 (513)
162 3ntd_A FAD-dependent pyridine 98.2 5.5E-06 1.9E-10 88.3 10.7 35 61-95 2-38 (565)
163 1y56_A Hypothetical protein PH 98.2 3.3E-06 1.1E-10 88.4 8.8 111 60-223 108-219 (493)
164 2bcg_G Secretory pathway GDP d 98.2 1.6E-06 5.5E-11 89.8 6.1 41 58-98 9-49 (453)
165 1sez_A Protoporphyrinogen oxid 98.2 2.4E-06 8.1E-11 89.7 7.6 63 58-120 11-88 (504)
166 2wpf_A Trypanothione reductase 98.2 3.2E-06 1.1E-10 88.6 8.4 35 57-91 4-39 (495)
167 2yqu_A 2-oxoglutarate dehydrog 98.1 1.1E-05 3.8E-10 83.5 12.3 98 61-225 168-266 (455)
168 4g6h_A Rotenone-insensitive NA 98.1 3.1E-06 1E-10 88.7 8.0 35 59-93 41-75 (502)
169 4b1b_A TRXR, thioredoxin reduc 98.1 1.3E-06 4.4E-11 92.1 4.9 34 60-93 42-75 (542)
170 3hyw_A Sulfide-quinone reducta 98.1 1.9E-06 6.6E-11 88.6 6.1 103 62-222 4-108 (430)
171 3ef6_A Toluene 1,2-dioxygenase 98.1 2.6E-06 8.9E-11 87.0 6.6 34 61-94 3-38 (410)
172 2jbv_A Choline oxidase; alcoho 98.1 2E-05 6.8E-10 83.4 13.4 57 166-222 212-272 (546)
173 2gag_A Heterotetrameric sarcos 98.1 1.6E-05 5.3E-10 89.9 13.1 35 60-94 128-162 (965)
174 2e1m_A L-glutamate oxidase; L- 98.1 3.8E-06 1.3E-10 84.2 6.9 36 60-95 44-80 (376)
175 1trb_A Thioredoxin reductase; 98.1 3.7E-05 1.3E-09 75.2 13.9 99 61-223 146-247 (320)
176 4eqs_A Coenzyme A disulfide re 98.0 1.2E-05 4.1E-10 82.7 10.0 34 61-94 1-36 (437)
177 2yg5_A Putrescine oxidase; oxi 98.0 3.9E-06 1.3E-10 86.7 6.4 60 60-119 5-79 (453)
178 1lvl_A Dihydrolipoamide dehydr 98.0 1E-05 3.5E-10 83.8 9.4 33 60-92 5-37 (458)
179 3ab1_A Ferredoxin--NADP reduct 98.0 3.1E-05 1.1E-09 77.3 12.5 99 61-223 164-263 (360)
180 1fl2_A Alkyl hydroperoxide red 98.0 5.1E-05 1.7E-09 73.9 13.8 95 61-222 145-241 (310)
181 2gqw_A Ferredoxin reductase; f 98.0 1.2E-05 4E-10 82.1 9.3 35 60-94 7-43 (408)
182 2r9z_A Glutathione amide reduc 98.0 3.7E-05 1.3E-09 79.7 13.1 99 61-225 167-266 (463)
183 1ebd_A E3BD, dihydrolipoamide 98.0 4.4E-05 1.5E-09 78.9 13.7 101 61-225 171-272 (455)
184 1nhp_A NADH peroxidase; oxidor 98.0 3.3E-05 1.1E-09 79.7 12.6 99 60-225 149-248 (447)
185 1d5t_A Guanine nucleotide diss 98.0 8.5E-06 2.9E-10 83.8 7.7 41 57-97 3-43 (433)
186 2q0l_A TRXR, thioredoxin reduc 98.0 8.7E-05 3E-09 72.2 14.7 97 60-223 143-241 (311)
187 3itj_A Thioredoxin reductase 1 98.0 5.1E-05 1.7E-09 74.7 13.1 96 60-222 173-270 (338)
188 2b9w_A Putative aminooxidase; 98.0 5.8E-06 2E-10 84.7 6.4 38 59-96 5-43 (424)
189 1v0j_A UDP-galactopyranose mut 98.0 4.6E-06 1.6E-10 84.8 5.5 38 58-95 5-43 (399)
190 2jae_A L-amino acid oxidase; o 98.0 6.2E-06 2.1E-10 86.2 6.4 39 59-97 10-48 (489)
191 2qae_A Lipoamide, dihydrolipoy 98.0 4.7E-05 1.6E-09 79.0 13.0 102 61-225 175-278 (468)
192 1gpe_A Protein (glucose oxidas 98.0 3.7E-05 1.3E-09 82.1 12.4 58 167-224 235-298 (587)
193 3fim_B ARYL-alcohol oxidase; A 98.0 8.2E-06 2.8E-10 86.5 7.2 57 166-222 211-275 (566)
194 1xhc_A NADH oxidase /nitrite r 98.0 6.7E-06 2.3E-10 82.6 6.1 33 61-94 9-41 (367)
195 3vrd_B FCCB subunit, flavocyto 98.0 3E-05 1E-09 78.7 10.9 104 62-224 4-109 (401)
196 1ges_A Glutathione reductase; 97.9 3E-05 1E-09 80.1 10.7 99 61-225 168-267 (450)
197 1v59_A Dihydrolipoamide dehydr 97.9 7.3E-05 2.5E-09 77.8 13.6 103 61-225 184-289 (478)
198 1mo9_A ORF3; nucleotide bindin 97.9 7.7E-05 2.6E-09 78.6 13.6 102 61-225 215-318 (523)
199 1rsg_A FMS1 protein; FAD bindi 97.9 5.1E-06 1.7E-10 87.5 4.4 39 60-98 8-47 (516)
200 3hdq_A UDP-galactopyranose mut 97.9 8E-06 2.7E-10 82.5 5.7 37 59-95 28-64 (397)
201 3r9u_A Thioredoxin reductase; 97.9 9.6E-05 3.3E-09 71.9 13.3 95 61-222 148-243 (315)
202 3lxd_A FAD-dependent pyridine 97.9 0.00011 3.6E-09 75.1 13.8 101 60-225 152-253 (415)
203 3fg2_P Putative rubredoxin red 97.9 9.5E-05 3.2E-09 75.2 13.4 100 61-225 143-243 (404)
204 3ic9_A Dihydrolipoamide dehydr 97.9 0.0001 3.5E-09 77.0 13.8 101 61-225 175-276 (492)
205 3urh_A Dihydrolipoyl dehydroge 97.9 9.3E-05 3.2E-09 77.3 13.4 102 61-225 199-302 (491)
206 1lvl_A Dihydrolipoamide dehydr 97.9 3.3E-05 1.1E-09 79.9 9.6 98 61-225 172-270 (458)
207 2hqm_A GR, grase, glutathione 97.9 7.7E-05 2.6E-09 77.7 12.0 100 61-225 186-287 (479)
208 3s5w_A L-ornithine 5-monooxyge 97.8 7.8E-05 2.7E-09 77.2 11.9 143 60-223 227-377 (463)
209 3cty_A Thioredoxin reductase; 97.8 0.00012 3.9E-09 71.7 12.4 95 61-223 156-252 (319)
210 1dxl_A Dihydrolipoamide dehydr 97.8 5.1E-05 1.8E-09 78.8 10.3 102 61-225 178-281 (470)
211 2iid_A L-amino-acid oxidase; f 97.8 2E-05 6.8E-10 82.5 7.0 39 60-98 33-71 (498)
212 1i8t_A UDP-galactopyranose mut 97.8 1.1E-05 3.9E-10 80.9 4.7 36 61-96 2-37 (367)
213 2r9z_A Glutathione amide reduc 97.8 1.3E-05 4.4E-10 83.2 5.1 34 59-92 3-36 (463)
214 2a8x_A Dihydrolipoyl dehydroge 97.8 9.1E-05 3.1E-09 76.8 11.5 100 61-224 172-272 (464)
215 1vdc_A NTR, NADPH dependent th 97.8 0.00016 5.4E-09 71.1 12.7 97 60-223 159-259 (333)
216 2q7v_A Thioredoxin reductase; 97.8 0.00027 9.1E-09 69.3 14.1 95 61-223 153-249 (325)
217 2bi7_A UDP-galactopyranose mut 97.8 1.9E-05 6.3E-10 79.8 5.8 37 60-96 3-39 (384)
218 3lad_A Dihydrolipoamide dehydr 97.8 0.00023 7.8E-09 74.0 14.1 100 61-224 181-281 (476)
219 2zbw_A Thioredoxin reductase; 97.8 0.00021 7.1E-09 70.3 13.2 98 61-223 153-252 (335)
220 1ges_A Glutathione reductase; 97.8 1.3E-05 4.5E-10 82.8 4.6 34 59-92 3-36 (450)
221 1mo9_A ORF3; nucleotide bindin 97.8 2.1E-05 7.1E-10 82.9 6.1 37 58-94 41-77 (523)
222 1onf_A GR, grase, glutathione 97.8 0.00018 6.2E-09 75.2 13.1 100 61-225 177-277 (500)
223 1zmd_A Dihydrolipoyl dehydroge 97.8 0.00019 6.4E-09 74.6 13.1 104 61-225 179-284 (474)
224 1q1r_A Putidaredoxin reductase 97.7 0.00016 5.6E-09 74.1 12.2 99 61-224 150-251 (431)
225 3ic9_A Dihydrolipoamide dehydr 97.7 1.6E-05 5.3E-10 83.2 4.6 34 60-93 8-41 (492)
226 1onf_A GR, grase, glutathione 97.7 2.5E-05 8.6E-10 81.8 5.3 34 60-93 2-35 (500)
227 2cdu_A NADPH oxidase; flavoenz 97.7 0.00023 7.7E-09 73.5 12.4 99 61-225 150-249 (452)
228 4dsg_A UDP-galactopyranose mut 97.7 3.2E-05 1.1E-09 80.6 6.0 37 60-96 9-46 (484)
229 1xdi_A RV3303C-LPDA; reductase 97.7 0.00019 6.5E-09 75.1 11.9 98 61-225 183-281 (499)
230 2vdc_G Glutamate synthase [NAD 97.7 3.1E-05 1.1E-09 80.0 5.4 35 60-94 122-156 (456)
231 1fec_A Trypanothione reductase 97.7 0.00023 7.8E-09 74.3 12.0 98 61-224 188-289 (490)
232 3ef6_A Toluene 1,2-dioxygenase 97.7 0.00013 4.4E-09 74.3 9.9 100 60-225 143-243 (410)
233 3oc4_A Oxidoreductase, pyridin 97.7 0.00048 1.6E-08 71.0 14.2 98 61-225 148-246 (452)
234 1ojt_A Surface protein; redox- 97.7 0.00017 5.7E-09 75.2 10.7 100 61-225 186-288 (482)
235 2gqw_A Ferredoxin reductase; f 97.6 0.00035 1.2E-08 71.0 12.6 95 60-224 145-240 (408)
236 1hyu_A AHPF, alkyl hydroperoxi 97.6 0.00018 6.3E-09 75.6 10.8 95 61-222 356-452 (521)
237 2bc0_A NADH oxidase; flavoprot 97.6 0.00034 1.2E-08 72.9 12.6 98 60-224 194-292 (490)
238 2wpf_A Trypanothione reductase 97.6 0.00028 9.7E-09 73.7 11.8 99 61-225 192-294 (495)
239 3dgz_A Thioredoxin reductase 2 97.6 0.00057 2E-08 71.2 14.1 101 61-224 186-288 (488)
240 3dgh_A TRXR-1, thioredoxin red 97.6 0.00053 1.8E-08 71.4 13.5 101 61-224 188-290 (483)
241 3k30_A Histamine dehydrogenase 97.6 5.3E-05 1.8E-09 82.6 6.1 37 58-94 389-425 (690)
242 3f8d_A Thioredoxin reductase ( 97.6 0.00064 2.2E-08 66.1 13.4 96 60-223 154-251 (323)
243 2v3a_A Rubredoxin reductase; a 97.6 4.7E-05 1.6E-09 76.8 5.2 35 59-93 3-39 (384)
244 3ntd_A FAD-dependent pyridine 97.6 0.00044 1.5E-08 73.4 13.0 98 61-225 152-269 (565)
245 2eq6_A Pyruvate dehydrogenase 97.6 3.7E-05 1.3E-09 79.7 4.5 34 60-93 6-39 (464)
246 3cgb_A Pyridine nucleotide-dis 97.6 0.00031 1.1E-08 73.0 11.4 97 60-224 186-283 (480)
247 3iwa_A FAD-dependent pyridine 97.5 0.00034 1.2E-08 72.6 11.3 98 61-224 160-259 (472)
248 3dk9_A Grase, GR, glutathione 97.5 0.0007 2.4E-08 70.3 13.6 102 61-224 188-294 (478)
249 1kdg_A CDH, cellobiose dehydro 97.5 6.1E-05 2.1E-09 79.8 5.4 59 165-223 198-261 (546)
250 1b37_A Protein (polyamine oxid 97.5 6.3E-05 2.1E-09 78.1 5.4 38 60-97 4-42 (472)
251 1zk7_A HGII, reductase, mercur 97.5 0.00047 1.6E-08 71.4 12.0 96 61-225 177-273 (467)
252 3l8k_A Dihydrolipoyl dehydroge 97.5 0.00062 2.1E-08 70.5 12.1 100 61-225 173-274 (466)
253 1xhc_A NADH oxidase /nitrite r 97.5 0.00045 1.5E-08 69.2 10.7 92 61-225 144-236 (367)
254 1m6i_A Programmed cell death p 97.5 0.00079 2.7E-08 70.2 12.6 98 61-224 181-283 (493)
255 1o94_A Tmadh, trimethylamine d 97.4 0.00012 4.2E-09 80.2 6.4 36 59-94 388-423 (729)
256 2a87_A TRXR, TR, thioredoxin r 97.4 0.00051 1.8E-08 67.6 10.4 95 60-222 155-251 (335)
257 3qfa_A Thioredoxin reductase 1 97.4 0.0015 5.2E-08 68.5 14.1 99 61-223 211-315 (519)
258 4b1b_A TRXR, thioredoxin reduc 97.4 0.001 3.4E-08 70.0 12.6 97 61-225 224-321 (542)
259 1ju2_A HydroxynitrIle lyase; f 97.4 5.4E-05 1.8E-09 79.9 2.9 50 174-223 205-261 (536)
260 2x8g_A Thioredoxin glutathione 97.4 0.0019 6.7E-08 69.0 15.1 100 61-224 287-396 (598)
261 2z3y_A Lysine-specific histone 97.4 0.00013 4.4E-09 79.1 5.6 38 59-96 106-143 (662)
262 1ps9_A 2,4-dienoyl-COA reducta 97.4 0.00015 5.2E-09 78.7 6.0 36 59-94 372-407 (671)
263 2xag_A Lysine-specific histone 97.4 0.00015 5.3E-09 80.1 6.1 38 60-97 278-315 (852)
264 1m6i_A Programmed cell death p 97.3 0.00013 4.5E-09 76.1 4.8 38 58-95 9-48 (493)
265 1lqt_A FPRA; NADP+ derivative, 97.3 0.00012 4.1E-09 75.6 4.3 35 60-94 3-44 (456)
266 3ics_A Coenzyme A-disulfide re 97.3 0.0011 3.8E-08 70.7 11.8 96 61-225 188-284 (588)
267 3d1c_A Flavin-containing putat 97.3 0.0021 7.2E-08 63.9 12.6 105 61-223 167-272 (369)
268 3lzw_A Ferredoxin--NADP reduct 97.3 0.0013 4.6E-08 64.1 10.9 94 61-223 155-250 (332)
269 4a5l_A Thioredoxin reductase; 97.2 0.002 6.9E-08 62.5 11.5 33 61-93 153-185 (314)
270 1gte_A Dihydropyrimidine dehyd 97.2 0.00026 9.1E-09 80.5 5.8 35 60-94 187-222 (1025)
271 1coy_A Cholesterol oxidase; ox 97.2 0.00033 1.1E-08 73.3 5.6 59 166-224 230-294 (507)
272 1n4w_A CHOD, cholesterol oxida 97.2 0.00027 9.2E-09 74.0 4.9 58 167-224 226-289 (504)
273 1cjc_A Protein (adrenodoxin re 97.2 0.00026 9E-09 73.1 4.7 35 60-94 6-42 (460)
274 1cjc_A Protein (adrenodoxin re 97.1 0.0026 9E-08 65.5 12.2 48 177-224 271-334 (460)
275 3gwf_A Cyclohexanone monooxyge 97.0 0.0021 7.2E-08 67.7 10.4 35 60-94 178-212 (540)
276 3kd9_A Coenzyme A disulfide re 97.0 0.0042 1.4E-07 63.8 11.7 96 61-224 149-245 (449)
277 1lqt_A FPRA; NADP+ derivative, 97.0 0.0024 8.2E-08 65.8 9.7 59 164-223 248-326 (456)
278 4eqs_A Coenzyme A disulfide re 96.9 0.0026 8.9E-08 65.2 9.8 33 61-93 148-180 (437)
279 3ayj_A Pro-enzyme of L-phenyla 96.9 0.00033 1.1E-08 75.5 3.0 36 60-95 56-100 (721)
280 4g6h_A Rotenone-insensitive NA 96.9 0.0039 1.3E-07 65.0 11.0 96 62-222 219-331 (502)
281 1vg0_A RAB proteins geranylger 96.9 0.0011 3.7E-08 70.6 6.5 41 57-97 5-45 (650)
282 2gag_A Heterotetrameric sarcos 96.7 0.003 1E-07 71.3 9.1 93 61-224 285-384 (965)
283 4gcm_A TRXR, thioredoxin reduc 96.7 0.024 8.3E-07 54.7 14.4 32 62-93 147-178 (312)
284 3fbs_A Oxidoreductase; structu 96.7 0.003 1E-07 60.5 7.7 33 60-93 141-173 (297)
285 1gte_A Dihydropyrimidine dehyd 96.5 0.0095 3.3E-07 67.7 11.3 32 62-93 334-366 (1025)
286 3uox_A Otemo; baeyer-villiger 96.5 0.0046 1.6E-07 65.2 8.1 34 61-94 186-219 (545)
287 2vdc_G Glutamate synthase [NAD 96.5 0.0031 1E-07 65.0 6.5 34 61-94 265-299 (456)
288 3k30_A Histamine dehydrogenase 96.5 0.0096 3.3E-07 64.7 10.5 96 61-222 524-623 (690)
289 2gv8_A Monooxygenase; FMO, FAD 96.3 0.011 3.9E-07 60.5 9.6 33 61-93 213-246 (447)
290 4ap3_A Steroid monooxygenase; 96.3 0.018 6E-07 60.8 10.8 35 60-94 191-225 (549)
291 3klj_A NAD(FAD)-dependent dehy 96.2 0.0033 1.1E-07 63.2 4.7 37 61-97 147-183 (385)
292 2g1u_A Hypothetical protein TM 96.0 0.0068 2.3E-07 52.3 5.1 35 60-94 19-53 (155)
293 2xve_A Flavin-containing monoo 96.0 0.024 8.2E-07 58.4 10.2 34 61-94 198-231 (464)
294 1ps9_A 2,4-dienoyl-COA reducta 96.0 0.028 9.7E-07 60.8 10.9 50 167-223 578-628 (671)
295 3fwz_A Inner membrane protein 95.9 0.012 4E-07 49.8 6.1 33 61-93 8-40 (140)
296 1lss_A TRK system potassium up 95.8 0.0099 3.4E-07 49.8 5.1 33 61-93 5-37 (140)
297 1id1_A Putative potassium chan 95.5 0.016 5.6E-07 49.7 5.6 33 61-93 4-36 (153)
298 3llv_A Exopolyphosphatase-rela 95.5 0.015 5.2E-07 49.0 5.1 33 61-93 7-39 (141)
299 3ic5_A Putative saccharopine d 95.2 0.02 6.7E-07 46.3 4.8 33 61-93 6-39 (118)
300 1o94_A Tmadh, trimethylamine d 95.2 0.049 1.7E-06 59.5 9.3 33 61-93 529-563 (729)
301 3h28_A Sulfide-quinone reducta 94.8 0.11 3.7E-06 52.8 10.1 52 165-222 203-255 (430)
302 3sx6_A Sulfide-quinone reducta 94.8 0.18 6.1E-06 51.3 11.6 52 166-221 212-267 (437)
303 2hmt_A YUAA protein; RCK, KTN, 94.6 0.03 1E-06 47.0 4.5 32 62-93 8-39 (144)
304 3c85_A Putative glutathione-re 94.6 0.037 1.3E-06 48.9 5.3 34 60-93 39-73 (183)
305 4fk1_A Putative thioredoxin re 94.3 0.088 3E-06 50.6 7.6 32 61-92 147-179 (304)
306 3l4b_C TRKA K+ channel protien 94.2 0.037 1.3E-06 50.5 4.5 33 62-94 2-34 (218)
307 4e12_A Diketoreductase; oxidor 94.0 0.059 2E-06 51.4 5.5 33 61-93 5-37 (283)
308 2ewd_A Lactate dehydrogenase,; 93.9 0.053 1.8E-06 52.7 5.0 34 60-93 4-38 (317)
309 3ado_A Lambda-crystallin; L-gu 93.8 0.053 1.8E-06 52.5 4.8 33 61-93 7-39 (319)
310 3i83_A 2-dehydropantoate 2-red 93.8 0.058 2E-06 52.5 5.1 32 61-92 3-34 (320)
311 2raf_A Putative dinucleotide-b 93.3 0.088 3E-06 47.7 5.3 35 60-94 19-53 (209)
312 1ks9_A KPA reductase;, 2-dehyd 93.2 0.088 3E-06 50.1 5.3 33 62-94 2-34 (291)
313 3hn2_A 2-dehydropantoate 2-red 93.2 0.068 2.3E-06 51.8 4.5 32 61-92 3-34 (312)
314 1f0y_A HCDH, L-3-hydroxyacyl-C 93.1 0.08 2.7E-06 51.0 4.9 32 62-93 17-48 (302)
315 1t2d_A LDH-P, L-lactate dehydr 93.0 0.1 3.5E-06 50.7 5.6 33 61-93 5-38 (322)
316 4g65_A TRK system potassium up 93.0 0.048 1.6E-06 56.0 3.3 60 60-119 3-68 (461)
317 4dio_A NAD(P) transhydrogenase 93.0 0.1 3.5E-06 52.1 5.5 33 61-93 191-223 (405)
318 3k6j_A Protein F01G10.3, confi 93.0 0.18 6.1E-06 51.4 7.4 34 61-94 55-88 (460)
319 1bg6_A N-(1-D-carboxylethyl)-L 92.9 0.09 3.1E-06 51.8 5.1 33 61-93 5-37 (359)
320 3dfz_A SIRC, precorrin-2 dehyd 92.9 0.099 3.4E-06 47.8 4.9 33 60-92 31-63 (223)
321 1pzg_A LDH, lactate dehydrogen 92.9 0.089 3E-06 51.4 4.9 33 61-93 10-43 (331)
322 3ghy_A Ketopantoate reductase 92.9 0.097 3.3E-06 51.2 5.2 32 61-92 4-35 (335)
323 2x5o_A UDP-N-acetylmuramoylala 92.9 0.075 2.6E-06 54.2 4.6 35 61-95 6-40 (439)
324 2hjr_A Malate dehydrogenase; m 92.7 0.12 4.1E-06 50.4 5.5 33 61-93 15-48 (328)
325 3qha_A Putative oxidoreductase 92.7 0.086 2.9E-06 50.6 4.4 35 60-94 15-49 (296)
326 1lld_A L-lactate dehydrogenase 92.7 0.1 3.6E-06 50.5 5.1 33 61-93 8-42 (319)
327 3eag_A UDP-N-acetylmuramate:L- 92.7 0.16 5.5E-06 49.5 6.4 34 61-94 5-39 (326)
328 2y0c_A BCEC, UDP-glucose dehyd 92.6 0.11 3.6E-06 53.6 5.2 34 60-93 8-41 (478)
329 1jw9_B Molybdopterin biosynthe 92.5 0.091 3.1E-06 49.1 4.2 33 61-93 32-65 (249)
330 1kyq_A Met8P, siroheme biosynt 92.5 0.074 2.5E-06 50.3 3.5 34 60-93 13-46 (274)
331 2dpo_A L-gulonate 3-dehydrogen 92.5 0.11 3.7E-06 50.5 4.8 33 61-93 7-39 (319)
332 3lk7_A UDP-N-acetylmuramoylala 92.4 0.098 3.3E-06 53.5 4.7 49 61-118 10-58 (451)
333 2ew2_A 2-dehydropantoate 2-red 92.4 0.12 4E-06 49.9 5.0 33 61-93 4-36 (316)
334 3gg2_A Sugar dehydrogenase, UD 92.3 0.12 4.1E-06 52.8 5.1 33 61-93 3-35 (450)
335 3l9w_A Glutathione-regulated p 92.3 0.13 4.5E-06 51.8 5.3 34 61-94 5-38 (413)
336 4e21_A 6-phosphogluconate dehy 92.3 0.13 4.4E-06 50.9 5.1 37 57-93 19-55 (358)
337 3g17_A Similar to 2-dehydropan 92.2 0.088 3E-06 50.5 3.8 33 61-93 3-35 (294)
338 4a7p_A UDP-glucose dehydrogena 92.2 0.14 4.9E-06 52.0 5.5 35 60-94 8-42 (446)
339 3oj0_A Glutr, glutamyl-tRNA re 92.0 0.067 2.3E-06 45.2 2.4 33 61-93 22-54 (144)
340 3h8l_A NADH oxidase; membrane 91.9 0.71 2.4E-05 46.2 10.3 49 164-222 220-269 (409)
341 3p2y_A Alanine dehydrogenase/p 91.8 0.12 4.2E-06 51.1 4.3 33 61-93 185-217 (381)
342 3pid_A UDP-glucose 6-dehydroge 91.8 0.15 5E-06 51.6 5.0 34 60-94 36-69 (432)
343 3doj_A AT3G25530, dehydrogenas 91.8 0.16 5.6E-06 49.0 5.2 33 61-93 22-54 (310)
344 3g79_A NDP-N-acetyl-D-galactos 91.8 0.15 5.1E-06 52.4 5.0 34 61-94 19-54 (478)
345 1z82_A Glycerol-3-phosphate de 91.7 0.16 5.5E-06 49.7 5.1 35 59-93 13-47 (335)
346 3k96_A Glycerol-3-phosphate de 91.7 0.18 6.1E-06 49.8 5.4 34 60-93 29-62 (356)
347 2v6b_A L-LDH, L-lactate dehydr 91.7 0.16 5.6E-06 48.9 5.0 32 62-93 2-35 (304)
348 4dna_A Probable glutathione re 91.5 0.18 6.1E-06 51.7 5.5 35 60-94 170-204 (463)
349 3ego_A Probable 2-dehydropanto 91.5 0.17 5.8E-06 48.8 4.9 32 61-93 3-34 (307)
350 1pjc_A Protein (L-alanine dehy 91.4 0.18 6E-06 50.0 5.0 33 61-93 168-200 (361)
351 4gx0_A TRKA domain protein; me 91.4 0.23 8E-06 52.3 6.3 57 61-118 349-407 (565)
352 1l7d_A Nicotinamide nucleotide 91.3 0.18 6.3E-06 50.3 5.1 34 60-93 172-205 (384)
353 3tl2_A Malate dehydrogenase; c 91.2 0.22 7.4E-06 48.2 5.3 32 61-92 9-41 (315)
354 1x13_A NAD(P) transhydrogenase 91.2 0.17 5.7E-06 50.9 4.7 33 61-93 173-205 (401)
355 3gvi_A Malate dehydrogenase; N 91.2 0.23 7.8E-06 48.3 5.5 33 61-93 8-41 (324)
356 3pef_A 6-phosphogluconate dehy 91.2 0.18 6.2E-06 48.0 4.7 34 61-94 2-35 (287)
357 1zcj_A Peroxisomal bifunctiona 91.2 0.17 5.9E-06 51.9 4.8 33 61-93 38-70 (463)
358 3dtt_A NADP oxidoreductase; st 91.1 0.23 7.9E-06 46.1 5.2 35 60-94 19-53 (245)
359 1guz_A Malate dehydrogenase; o 91.0 0.22 7.5E-06 48.1 5.2 32 62-93 2-35 (310)
360 1ur5_A Malate dehydrogenase; o 90.9 0.24 8.3E-06 47.8 5.3 33 61-93 3-36 (309)
361 3g0o_A 3-hydroxyisobutyrate de 90.9 0.22 7.7E-06 47.8 5.1 33 61-93 8-40 (303)
362 3hwr_A 2-dehydropantoate 2-red 90.9 0.21 7.2E-06 48.4 4.9 32 60-92 19-50 (318)
363 4b63_A L-ornithine N5 monooxyg 90.8 1.1 3.8E-05 46.3 10.7 34 61-94 247-282 (501)
364 1zej_A HBD-9, 3-hydroxyacyl-CO 90.7 0.23 7.9E-06 47.5 4.9 33 60-93 12-44 (293)
365 3o0h_A Glutathione reductase; 90.6 0.24 8.3E-06 51.0 5.4 35 60-94 191-225 (484)
366 1mv8_A GMD, GDP-mannose 6-dehy 90.6 0.19 6.4E-06 51.2 4.4 32 62-93 2-33 (436)
367 3p7m_A Malate dehydrogenase; p 90.6 0.29 1E-05 47.4 5.6 33 61-93 6-39 (321)
368 2a9f_A Putative malic enzyme ( 90.5 0.22 7.7E-06 49.2 4.7 33 60-92 188-221 (398)
369 2vns_A Metalloreductase steap3 90.5 0.29 1E-05 44.4 5.2 33 61-93 29-61 (215)
370 4huj_A Uncharacterized protein 90.4 0.13 4.5E-06 46.9 2.8 33 61-93 24-57 (220)
371 1y6j_A L-lactate dehydrogenase 90.4 0.28 9.5E-06 47.6 5.3 34 60-93 7-42 (318)
372 2uyy_A N-PAC protein; long-cha 90.2 0.32 1.1E-05 47.0 5.6 33 61-93 31-63 (316)
373 3phh_A Shikimate dehydrogenase 90.2 0.3 1E-05 45.9 5.2 35 60-94 118-152 (269)
374 1vpd_A Tartronate semialdehyde 90.1 0.23 7.9E-06 47.5 4.4 33 61-93 6-38 (299)
375 2eez_A Alanine dehydrogenase; 90.1 0.27 9.4E-06 48.7 5.1 33 61-93 167-199 (369)
376 3l6d_A Putative oxidoreductase 90.1 0.37 1.3E-05 46.4 5.9 34 60-93 9-42 (306)
377 3cky_A 2-hydroxymethyl glutara 90.1 0.25 8.6E-06 47.3 4.6 34 60-93 4-37 (301)
378 2aef_A Calcium-gated potassium 90.0 0.11 3.9E-06 47.7 2.1 34 60-94 9-42 (234)
379 4dll_A 2-hydroxy-3-oxopropiona 90.0 0.27 9.3E-06 47.6 4.9 34 60-93 31-64 (320)
380 1txg_A Glycerol-3-phosphate de 89.9 0.22 7.5E-06 48.5 4.1 30 62-91 2-31 (335)
381 2izz_A Pyrroline-5-carboxylate 89.9 0.3 1E-05 47.4 5.0 34 60-93 22-59 (322)
382 1nyt_A Shikimate 5-dehydrogena 89.8 0.31 1.1E-05 46.0 5.0 33 61-93 120-152 (271)
383 4ffl_A PYLC; amino acid, biosy 89.7 0.39 1.3E-05 47.4 5.8 36 62-97 3-38 (363)
384 1evy_A Glycerol-3-phosphate de 89.7 0.22 7.7E-06 49.2 4.1 32 62-93 17-48 (366)
385 3h8v_A Ubiquitin-like modifier 89.6 0.26 9E-06 47.0 4.3 34 60-93 36-70 (292)
386 3mog_A Probable 3-hydroxybutyr 89.6 0.29 1E-05 50.3 5.0 33 61-93 6-38 (483)
387 3rui_A Ubiquitin-like modifier 89.6 0.34 1.2E-05 47.1 5.1 35 60-94 34-69 (340)
388 3pqe_A L-LDH, L-lactate dehydr 89.6 0.3 1E-05 47.4 4.8 32 61-92 6-39 (326)
389 1jay_A Coenzyme F420H2:NADP+ o 89.6 0.35 1.2E-05 43.5 5.0 32 62-93 2-34 (212)
390 2zyd_A 6-phosphogluconate dehy 89.6 0.31 1E-05 50.2 5.1 35 59-93 14-48 (480)
391 1vl6_A Malate oxidoreductase; 89.5 0.3 1E-05 48.2 4.6 33 60-92 192-225 (388)
392 4ezb_A Uncharacterized conserv 89.4 0.34 1.2E-05 46.9 5.0 34 61-94 25-59 (317)
393 2vhw_A Alanine dehydrogenase; 89.4 0.34 1.2E-05 48.2 5.1 33 61-93 169-201 (377)
394 3pdu_A 3-hydroxyisobutyrate de 89.4 0.21 7E-06 47.6 3.4 32 62-93 3-34 (287)
395 2p4q_A 6-phosphogluconate dehy 89.3 0.37 1.3E-05 49.8 5.5 34 60-93 10-43 (497)
396 1oju_A MDH, malate dehydrogena 89.2 0.29 9.9E-06 46.8 4.3 32 62-93 2-35 (294)
397 2q3e_A UDP-glucose 6-dehydroge 89.2 0.26 8.8E-06 50.6 4.2 33 61-93 6-40 (467)
398 1a5z_A L-lactate dehydrogenase 89.2 0.29 9.8E-06 47.5 4.3 32 62-93 2-35 (319)
399 3vtf_A UDP-glucose 6-dehydroge 89.2 0.36 1.2E-05 48.9 5.1 34 60-93 21-54 (444)
400 2rcy_A Pyrroline carboxylate r 89.2 0.34 1.2E-05 45.3 4.7 34 61-94 5-42 (262)
401 2f1k_A Prephenate dehydrogenas 89.1 0.37 1.3E-05 45.5 5.0 32 62-93 2-33 (279)
402 1zud_1 Adenylyltransferase THI 89.1 0.34 1.2E-05 45.2 4.5 33 61-93 29-62 (251)
403 1dlj_A UDP-glucose dehydrogena 89.0 0.29 1E-05 49.1 4.4 31 62-93 2-32 (402)
404 2egg_A AROE, shikimate 5-dehyd 88.9 0.37 1.3E-05 46.2 4.8 33 61-93 142-175 (297)
405 4gwg_A 6-phosphogluconate dehy 88.8 0.43 1.5E-05 49.0 5.4 34 61-94 5-38 (484)
406 2pv7_A T-protein [includes: ch 88.7 0.41 1.4E-05 45.9 5.0 33 61-93 22-55 (298)
407 3dfu_A Uncharacterized protein 88.7 0.14 4.7E-06 47.1 1.5 31 61-91 7-37 (232)
408 1ez4_A Lactate dehydrogenase; 88.6 0.37 1.3E-05 46.7 4.6 34 59-92 4-39 (318)
409 3nep_X Malate dehydrogenase; h 88.6 0.37 1.3E-05 46.6 4.6 32 62-93 2-35 (314)
410 3ggo_A Prephenate dehydrogenas 88.6 0.46 1.6E-05 45.9 5.3 33 61-93 34-68 (314)
411 3vku_A L-LDH, L-lactate dehydr 88.6 0.38 1.3E-05 46.7 4.7 32 61-92 10-43 (326)
412 3ond_A Adenosylhomocysteinase; 88.6 0.4 1.4E-05 48.9 5.0 33 61-93 266-298 (488)
413 2qyt_A 2-dehydropantoate 2-red 88.5 0.27 9.1E-06 47.4 3.6 31 61-91 9-45 (317)
414 2h78_A Hibadh, 3-hydroxyisobut 88.5 0.36 1.2E-05 46.2 4.5 33 61-93 4-36 (302)
415 3hyw_A Sulfide-quinone reducta 88.5 2.6 8.8E-05 42.5 11.1 53 165-223 203-256 (430)
416 3gpi_A NAD-dependent epimerase 88.3 0.56 1.9E-05 44.3 5.7 34 61-94 4-37 (286)
417 3tri_A Pyrroline-5-carboxylate 88.2 0.53 1.8E-05 44.6 5.4 33 61-93 4-39 (280)
418 2i6t_A Ubiquitin-conjugating e 88.2 0.39 1.3E-05 46.2 4.4 33 61-93 15-49 (303)
419 2pgd_A 6-phosphogluconate dehy 88.2 0.47 1.6E-05 48.9 5.3 33 61-93 3-35 (482)
420 1yqg_A Pyrroline-5-carboxylate 88.0 0.4 1.4E-05 44.8 4.3 32 62-93 2-34 (263)
421 3ldh_A Lactate dehydrogenase; 87.9 0.45 1.5E-05 46.2 4.7 33 61-93 22-56 (330)
422 1x0v_A GPD-C, GPDH-C, glycerol 87.9 0.26 8.8E-06 48.5 3.1 34 61-94 9-49 (354)
423 2gf2_A Hibadh, 3-hydroxyisobut 87.9 0.44 1.5E-05 45.4 4.7 32 62-93 2-33 (296)
424 3u62_A Shikimate dehydrogenase 87.9 0.59 2E-05 43.6 5.4 32 62-93 110-142 (253)
425 3ktd_A Prephenate dehydrogenas 87.8 0.58 2E-05 45.7 5.5 33 61-93 9-41 (341)
426 1ldn_A L-lactate dehydrogenase 87.8 0.49 1.7E-05 45.8 4.9 33 61-93 7-41 (316)
427 1p77_A Shikimate 5-dehydrogena 87.8 0.38 1.3E-05 45.5 4.0 33 61-93 120-152 (272)
428 3ius_A Uncharacterized conserv 87.7 0.46 1.6E-05 44.8 4.6 33 61-93 6-38 (286)
429 1hyh_A L-hicdh, L-2-hydroxyiso 87.7 0.4 1.4E-05 46.2 4.3 32 62-93 3-36 (309)
430 3qsg_A NAD-binding phosphogluc 87.7 0.41 1.4E-05 46.2 4.3 33 61-93 25-58 (312)
431 4gx0_A TRKA domain protein; me 87.7 0.92 3.1E-05 47.7 7.4 59 60-118 127-191 (565)
432 3don_A Shikimate dehydrogenase 87.7 0.38 1.3E-05 45.5 3.9 33 61-93 118-151 (277)
433 2g5c_A Prephenate dehydrogenas 87.6 0.5 1.7E-05 44.6 4.8 32 62-93 3-36 (281)
434 3d0o_A L-LDH 1, L-lactate dehy 87.6 0.47 1.6E-05 45.9 4.6 33 60-92 6-40 (317)
435 2wtb_A MFP2, fatty acid multif 87.6 0.44 1.5E-05 51.7 4.9 32 62-93 314-345 (725)
436 4a9w_A Monooxygenase; baeyer-v 87.6 0.41 1.4E-05 46.5 4.3 33 60-93 163-195 (357)
437 3h5n_A MCCB protein; ubiquitin 87.5 0.45 1.6E-05 46.8 4.5 34 60-93 118-152 (353)
438 3ew7_A LMO0794 protein; Q8Y8U8 87.5 0.63 2.1E-05 41.8 5.2 32 62-93 2-34 (221)
439 1yj8_A Glycerol-3-phosphate de 87.4 0.36 1.2E-05 47.9 3.8 33 62-94 23-62 (375)
440 4gbj_A 6-phosphogluconate dehy 87.4 0.4 1.4E-05 46.0 3.9 33 62-94 7-39 (297)
441 3e8x_A Putative NAD-dependent 87.4 0.56 1.9E-05 42.9 4.9 34 60-93 21-55 (236)
442 1pjq_A CYSG, siroheme synthase 87.3 0.5 1.7E-05 48.3 4.9 32 61-92 13-44 (457)
443 3orq_A N5-carboxyaminoimidazol 87.3 1.1 3.8E-05 44.4 7.3 37 60-96 12-48 (377)
444 3zwc_A Peroxisomal bifunctiona 87.2 0.78 2.7E-05 49.7 6.5 34 61-94 317-350 (742)
445 1pgj_A 6PGDH, 6-PGDH, 6-phosph 87.1 0.55 1.9E-05 48.3 5.1 33 61-93 2-34 (478)
446 3tnl_A Shikimate dehydrogenase 87.1 0.6 2.1E-05 45.0 5.0 33 61-93 155-188 (315)
447 3gt0_A Pyrroline-5-carboxylate 87.0 0.67 2.3E-05 42.9 5.2 33 61-93 3-39 (247)
448 2cvz_A Dehydrogenase, 3-hydrox 87.0 0.49 1.7E-05 44.8 4.4 31 62-93 3-33 (289)
449 3d4o_A Dipicolinate synthase s 87.0 0.61 2.1E-05 44.5 5.0 33 61-93 156-188 (293)
450 3c24_A Putative oxidoreductase 87.0 0.59 2E-05 44.4 4.9 33 61-93 12-45 (286)
451 2we8_A Xanthine dehydrogenase; 86.9 0.68 2.3E-05 46.0 5.4 36 59-94 203-238 (386)
452 4aj2_A L-lactate dehydrogenase 86.9 0.76 2.6E-05 44.6 5.6 33 60-92 19-53 (331)
453 1np3_A Ketol-acid reductoisome 86.9 0.7 2.4E-05 45.1 5.5 33 61-93 17-49 (338)
454 3o38_A Short chain dehydrogena 86.9 0.86 2.9E-05 42.5 5.9 33 61-93 23-57 (266)
455 2hk9_A Shikimate dehydrogenase 86.9 0.49 1.7E-05 44.7 4.2 33 61-93 130-162 (275)
456 1n4w_A CHOD, cholesterol oxida 86.8 1.2 4.3E-05 45.9 7.7 35 59-93 4-38 (504)
457 2iz1_A 6-phosphogluconate dehy 86.8 0.65 2.2E-05 47.7 5.4 33 61-93 6-38 (474)
458 3h2s_A Putative NADH-flavin re 86.8 0.69 2.4E-05 41.7 5.1 32 62-93 2-34 (224)
459 3gvp_A Adenosylhomocysteinase 86.8 0.51 1.7E-05 47.3 4.4 34 60-93 220-253 (435)
460 2rir_A Dipicolinate synthase, 86.6 0.74 2.5E-05 44.1 5.4 33 61-93 158-190 (300)
461 3jyo_A Quinate/shikimate dehyd 86.6 0.74 2.5E-05 43.7 5.3 33 61-93 128-161 (283)
462 4gsl_A Ubiquitin-like modifier 86.6 0.63 2.2E-05 48.7 5.1 35 60-94 326-361 (615)
463 2o3j_A UDP-glucose 6-dehydroge 86.5 0.46 1.6E-05 48.9 4.1 33 61-93 10-44 (481)
464 3c7a_A Octopine dehydrogenase; 86.5 0.4 1.4E-05 48.1 3.6 31 61-91 3-34 (404)
465 1hdo_A Biliverdin IX beta redu 86.5 0.8 2.7E-05 40.5 5.3 34 61-94 4-38 (206)
466 3ce6_A Adenosylhomocysteinase; 86.3 0.64 2.2E-05 47.8 5.0 33 61-93 275-307 (494)
467 1nvt_A Shikimate 5'-dehydrogen 86.3 0.54 1.9E-05 44.7 4.2 31 61-92 129-159 (287)
468 3dhn_A NAD-dependent epimerase 86.3 0.54 1.8E-05 42.6 4.1 34 61-94 5-39 (227)
469 2d5c_A AROE, shikimate 5-dehyd 86.1 0.8 2.7E-05 42.8 5.3 32 62-93 118-149 (263)
470 3q2o_A Phosphoribosylaminoimid 86.1 1.1 3.8E-05 44.6 6.6 35 61-95 15-49 (389)
471 2ahr_A Putative pyrroline carb 86.0 0.66 2.3E-05 43.2 4.6 33 61-93 4-36 (259)
472 3d1l_A Putative NADP oxidoredu 86.0 0.58 2E-05 43.8 4.2 33 61-93 11-44 (266)
473 3fbt_A Chorismate mutase and s 85.9 0.66 2.3E-05 44.0 4.5 34 60-93 122-156 (282)
474 3vh1_A Ubiquitin-like modifier 85.9 0.7 2.4E-05 48.3 5.0 34 60-93 327-361 (598)
475 3ojo_A CAP5O; rossmann fold, c 85.8 0.58 2E-05 47.2 4.3 34 61-94 12-45 (431)
476 1wdk_A Fatty oxidation complex 85.7 0.55 1.9E-05 50.9 4.3 33 61-93 315-347 (715)
477 1edz_A 5,10-methylenetetrahydr 85.4 0.66 2.3E-05 44.7 4.3 33 60-92 177-210 (320)
478 3t4e_A Quinate/shikimate dehyd 85.4 0.84 2.9E-05 43.9 5.0 33 61-93 149-182 (312)
479 2d4a_B Malate dehydrogenase; a 85.3 0.71 2.4E-05 44.4 4.5 32 62-93 1-33 (308)
480 1coy_A Cholesterol oxidase; ox 85.3 1.6 5.5E-05 45.1 7.6 36 59-94 10-45 (507)
481 4b4o_A Epimerase family protei 85.3 0.98 3.4E-05 42.9 5.5 33 62-94 2-35 (298)
482 3pwz_A Shikimate dehydrogenase 85.3 0.94 3.2E-05 42.7 5.3 34 60-93 120-154 (272)
483 3o8q_A Shikimate 5-dehydrogena 85.3 0.94 3.2E-05 42.9 5.3 34 60-93 126-160 (281)
484 3fi9_A Malate dehydrogenase; s 85.1 0.95 3.3E-05 44.2 5.3 33 60-92 8-43 (343)
485 3k5i_A Phosphoribosyl-aminoimi 85.0 0.91 3.1E-05 45.5 5.4 39 57-96 21-59 (403)
486 3two_A Mannitol dehydrogenase; 84.9 0.9 3.1E-05 44.4 5.2 33 61-93 178-210 (348)
487 1lu9_A Methylene tetrahydromet 84.8 0.94 3.2E-05 43.0 5.1 32 61-92 120-152 (287)
488 1i36_A Conserved hypothetical 84.6 0.74 2.5E-05 43.0 4.2 30 62-91 2-31 (264)
489 1e3i_A Alcohol dehydrogenase, 84.6 1.3 4.4E-05 43.8 6.2 33 61-93 197-230 (376)
490 1tt5_B Ubiquitin-activating en 84.5 0.93 3.2E-05 45.8 5.1 34 60-93 40-74 (434)
491 1y8q_A Ubiquitin-like 1 activa 84.5 0.76 2.6E-05 45.0 4.4 34 60-93 36-70 (346)
492 2zqz_A L-LDH, L-lactate dehydr 84.5 0.84 2.9E-05 44.3 4.7 33 60-92 9-43 (326)
493 1gpj_A Glutamyl-tRNA reductase 84.4 0.72 2.4E-05 46.3 4.2 34 60-93 167-201 (404)
494 1npy_A Hypothetical shikimate 84.2 0.86 2.9E-05 42.9 4.4 33 61-93 120-153 (271)
495 1mld_A Malate dehydrogenase; o 84.0 0.89 3E-05 43.9 4.5 32 62-93 2-36 (314)
496 1leh_A Leucine dehydrogenase; 84.0 1 3.4E-05 44.4 5.0 32 61-92 174-205 (364)
497 4id9_A Short-chain dehydrogena 84.0 1.1 3.8E-05 43.4 5.4 35 60-94 19-54 (347)
498 2qrj_A Saccharopine dehydrogen 84.0 0.85 2.9E-05 45.2 4.4 34 60-93 214-251 (394)
499 2pzm_A Putative nucleotide sug 83.9 1.3 4.4E-05 42.8 5.7 33 61-93 21-54 (330)
500 1piw_A Hypothetical zinc-type 83.8 0.91 3.1E-05 44.6 4.6 33 61-93 181-213 (360)
No 1
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=100.00 E-value=1.2e-47 Score=410.08 Aligned_cols=414 Identities=20% Similarity=0.179 Sum_probs=294.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeee--eE--EE
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFG--YA--LF 135 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~--~~--~~ 135 (526)
++||+||||||+||++|+.|+++|++|+|+||++......++..+++++++.|+++|+.+.+.+........ +. ..
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 84 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIRLA 84 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEEEE
T ss_pred cCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeeeEE
Confidence 589999999999999999999999999999999888788889999999999999999998877654321111 11 11
Q ss_pred E--CCeeee-e--cCCCc----CCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCC----eEEEEEEE
Q 009785 136 K--DGNRTQ-I--SYPLE----KFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKG----TIKGVQYK 201 (526)
Q Consensus 136 ~--~~~~~~-~--~~~~~----~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~----~v~gv~v~ 201 (526)
. .+.... . .++.. ..........++|..+++.|++.+.+. ++++++++ |++++++++ .+. +++.
T Consensus 85 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~-gv~i~~~~~v~~i~~~~~~~~~~v~-v~~~ 162 (535)
T 3ihg_A 85 ESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKH-GGAIRFGTRLLSFRQHDDDAGAGVT-ARLA 162 (535)
T ss_dssp SSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHT-TCEEESSCEEEEEEEECGGGCSEEE-EEEE
T ss_pred eccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhC-CCEEEeCCEEEEEEECCCCccccEE-EEEE
Confidence 1 121111 0 11100 000122356789999999999999998 79999885 999998876 554 6666
Q ss_pred eCCCcEEEEEcCeEEEeecCCccccccccCCCCCCcc--ceeEEEEeccCCCC----CCcc-EEEecCCCcEEEEecCC-
Q 009785 202 TKAGEELTAYAPLTIVCDGCFSNLRRSLCNPKVDVPS--CFVGLVLENCNLPF----ENHG-HVVLADPSPILFYPISS- 273 (526)
Q Consensus 202 ~~~G~~~~i~a~~vV~ADG~~S~vR~~l~~~~~~~~~--~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~p~~~- 273 (526)
+.+| ..+++||+||+|||.+|.+|++++++...... ....+.+. .+++. .... .++..+.++.+++|+.+
T Consensus 163 ~~~~-~~~i~a~~vV~AdG~~S~vR~~lgi~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~p~~~~ 240 (535)
T 3ihg_A 163 GPDG-EYDLRAGYLVGADGNRSLVRESLGIGRYGHGTLTHMVGVIFD-ADLSGIMEPGTTGWYYLHHPEFKGTFGPTDRP 240 (535)
T ss_dssp ETTE-EEEEEEEEEEECCCTTCHHHHHTTCCEEEEEEEEEEEEEEEE-CCGGGTSCTTCCEEEEEECSSCEEEEEECSST
T ss_pred cCCC-eEEEEeCEEEECCCCcchHHHHcCCCcCCCCccceEEEEEEe-ccChhhccCCceEEEEEECCCceEEEEEecCC
Confidence 6555 46789999999999999999999876544332 22222222 23322 1122 33345566788889987
Q ss_pred CcEEEEEEeCCCC---CCCCCchHHHHHHHHhcCC-CCChhhHHHHHhhhcCCCeEeccCCCCCCCCCCCCcEEEEccCC
Q 009785 274 NEVRCLVDIPGQK---VPSISNGEMANYLKTVVAP-QIPREIFHSFVAAVDGGNIKTMPNRSMPAAPYPTPGALLMGDAF 349 (526)
Q Consensus 274 ~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~-~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~grv~LiGDAA 349 (526)
+.+.+.+..+.+. .+..+.+++.+.+++.+.. ..+.+ ......|+.....+++|..|||+|+||||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~e~~~~~l~~~~~~~~~~~~----------~~~~~~~~~~~~~a~~~~~grv~LvGDAA 310 (535)
T 3ihg_A 241 DRHTLFVEYDPDEGERPEDFTPQRCVELIGLALDAPEVKPE----------LVDIQGWEMAARIAERWREGRVFLAGDAA 310 (535)
T ss_dssp TEEEEEEEECTTTTCCGGGCCHHHHHHHHHHHHTCSSCCCE----------EEEEEEEEEEEEEESCSEETTEEECTTTT
T ss_pred CEEEEEEeeCccccCccccCCHHHHHHHHHHHhCCCCCcee----------EEEeeEeeeeEEEECccccCCEEEEeccc
Confidence 4344444444322 2345566777777766542 22211 11345677777778899999999999999
Q ss_pred CcCCCCCchhHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhHccCCchHHHHHHHH
Q 009785 350 NMRHPLTGGGMTVALSDIVILRNLLRHLSNLNDAPALCNYLESFYTLRKPVASTINTLAGALYQVFSASPDEARKEMRQA 429 (526)
Q Consensus 350 h~~~P~~G~G~n~al~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~a~~~~~~~~~~~~~~~~~lr~~ 429 (526)
|.++|++|||+|+||+||.+|+|+|+.+.+ +.+.+.+|++|+++|+|++..++..|..+++.+... +......++.
T Consensus 311 H~~~P~~GqG~n~ai~DA~~La~~La~~l~---g~~~~~lL~~Ye~eR~p~a~~~~~~s~~~~~~~~~~-~~~~~~~~~~ 386 (535)
T 3ihg_A 311 KVTPPTGGMSGNAAVADGFDLAWKLAAVLQ---GQAGAGLLDTYEDERKVAAELVVAEALAIYAQRMAP-HMAEVWDKSV 386 (535)
T ss_dssp EECCSTTSCHHHHHHHHHHHHHHHHHHHHT---TSSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTCG-GGTTTSCCCC
T ss_pred ccCCCccCCccccccccHHHHHHHHHHHhc---CCCcHHHHHhhHHHHHHHHHHHHHHHHHhhHhhccc-ccCccccccc
Confidence 999999999999999999999999998643 223367999999999999999999999888776443 2111111233
Q ss_pred HHHHHhcCCCCcchhhhhhcC----------CCCCCchhHHHHHH---------HHHHHHhhhcccCCChHHHHHHHHHH
Q 009785 430 CFDYLSLGGIFSSGPVSLLSG----------LNPRPLILVFHFFA---------VAIYGVGRILLPFPSPYRFWIGARII 490 (526)
Q Consensus 430 ~~~~~~~g~~~~~~~~~~~~g----------~~~~p~~~~~h~~~---------~~l~~~~~~l~~~~~~~~~~~~~~~~ 490 (526)
+...+++|++|.++++...+. ..++||.|+||.|+ +|++|.+|+|++++.+..|..+..-.
T Consensus 387 ~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~pG~r~p~~~l~~~~~~~~~~dl~g~~f~ll~~~~~~~~~~~~~~~ 466 (535)
T 3ihg_A 387 GYPETLLGFRYRSSAVLATDDDPARVENPLTPSGRPGFRGPHVLVSRHGERLSTVDLFGDGWTLLAGELGADWVAAAEAV 466 (535)
T ss_dssp CHHHHHTSBCCCSTTCCCSCCCCCSBCCTTSCCCCTTSBCCCCEEEETTEEEEGGGGCSSSEEEEECTTCHHHHHHHHHH
T ss_pred ccceeeeCcccCCCceecCCCCCCcccccCCCCCCCCCcCCCceeecCCceeeHHHhcCCceEEEecCCccHHHHHHHHH
Confidence 445678999999999875442 24679999999987 89999999999987766665555433
Q ss_pred H
Q 009785 491 T 491 (526)
Q Consensus 491 ~ 491 (526)
.
T Consensus 467 ~ 467 (535)
T 3ihg_A 467 S 467 (535)
T ss_dssp H
T ss_pred H
Confidence 3
No 2
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=100.00 E-value=1.4e-45 Score=389.30 Aligned_cols=393 Identities=20% Similarity=0.197 Sum_probs=280.8
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEE
Q 009785 56 ECPFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALF 135 (526)
Q Consensus 56 ~~~~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~ 135 (526)
.+++++||+||||||+||++|+.|+++|++|+|+||.+......++..++++++++|+++|+.+.+... ...... .
T Consensus 7 ~~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~--~~~~~~--~ 82 (500)
T 2qa1_A 7 HHRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEV--ETSTQG--H 82 (500)
T ss_dssp -CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSC--CBCCEE--E
T ss_pred CccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhc--cccccc--c
Confidence 445679999999999999999999999999999999988777788899999999999999999877653 111111 1
Q ss_pred ECCeeeeecCCCcCCC-CCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcC
Q 009785 136 KDGNRTQISYPLEKFH-SDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAP 213 (526)
Q Consensus 136 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~ 213 (526)
..+.. ..+. ... ..+..+.++|..+++.|.+.+.+. ++++++++ |++++++++.+. |++.+.+| +.+++||
T Consensus 83 ~~~~~--~~~~--~~~~~~~~~~~i~~~~l~~~L~~~~~~~-gv~v~~~~~v~~i~~~~~~v~-v~~~~~~g-~~~~~a~ 155 (500)
T 2qa1_A 83 FGGLP--IDFG--VLEGAWQAAKTVPQSVTETHLEQWATGL-GADIRRGHEVLSLTDDGAGVT-VEVRGPEG-KHTLRAA 155 (500)
T ss_dssp ETTEE--EEGG--GSTTGGGCEEEEEHHHHHHHHHHHHHHT-TCEEEETCEEEEEEEETTEEE-EEEEETTE-EEEEEES
T ss_pred cccee--cccc--cCCCCCCceeecCHHHHHHHHHHHHHHC-CCEEECCcEEEEEEEcCCeEE-EEEEcCCC-CEEEEeC
Confidence 12211 1111 111 123457789999999999999987 68999884 999999888665 66666555 4578999
Q ss_pred eEEEeecCCccccccccCCCCCCccceeEEEEeccCCC-CCCccEEEecCCCcEEEEecCCCcEEEEEEeCCCC----CC
Q 009785 214 LTIVCDGCFSNLRRSLCNPKVDVPSCFVGLVLENCNLP-FENHGHVVLADPSPILFYPISSNEVRCLVDIPGQK----VP 288 (526)
Q Consensus 214 ~vV~ADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~----~~ 288 (526)
+||+|||.+|.||++++++.++......++... ...+ .+....+++.++++++++|++++..++.+..+... ..
T Consensus 156 ~vVgADG~~S~VR~~lg~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~p~~~g~~~~~~~~~~~~~~~~~~ 234 (500)
T 2qa1_A 156 YLVGCDGGRSSVRKAAGFDFPGTAATMEMYLAD-IKGVELQPRMIGETLPGGMVMVGPLPGGITRIIVCERGTPPQRRET 234 (500)
T ss_dssp EEEECCCTTCHHHHHTTCCCCEECCCCEEEEEE-EESCCCCCEEEEEEETTEEEEEEEETTTEEEEEEEETTCCC-----
T ss_pred EEEECCCcchHHHHHcCCCcCCCccceEEEEEE-EEeCCCCCceEEEECCCcEEEEEEcCCCEEEEEEEcCCCCCccccC
Confidence 999999999999999988765444333343332 1121 12223455667788999999988777776543221 12
Q ss_pred CCCchHHHHHHHHhcCCCCChhhHHHHHhhhcCCCeEeccCCCCCCCCCCCCcEEEEccCCCcCCCCCchhHHHHHHHHH
Q 009785 289 SISNGEMANYLKTVVAPQIPREIFHSFVAAVDGGNIKTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIV 368 (526)
Q Consensus 289 ~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~grv~LiGDAAh~~~P~~G~G~n~al~Da~ 368 (526)
..+.+++.+.+++.+.+.++.. +......|+.....+++|..|||+|+|||||.++|++|||||+||+||.
T Consensus 235 ~~~~~~~~~~l~~~~~~~~~~~---------~~~~~~~~~~~~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~ 305 (500)
T 2qa1_A 235 PPSWHEVADAWKRLTGDDIAHA---------EPVWVSAFGNATRQVTEYRRGRVILAGDSAHIHLPAGGQGMNTSIQDAV 305 (500)
T ss_dssp CCCHHHHHHHHHHHHSCCCTTS---------EEEEEEEEECCEEECSCSEETTEEECGGGTEECCCCSSCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhcCCCCCcc---------ceeEEEEeccCcEEccccccCCEEEEEccccCCCCccccchhhhHHHHH
Confidence 3456667777766554332210 1112335666666788999999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCCChHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhHccCCchHHHHHHHHHHHH--------------H
Q 009785 369 ILRNLLRHLSNLNDAPALCNYLESFYTLRKPVASTINTLAGALYQVFSASPDEARKEMRQACFDY--------------L 434 (526)
Q Consensus 369 ~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~a~~~~~~~~~~~~~~~~~lr~~~~~~--------------~ 434 (526)
+|+|+|+.+.. +.+.+.+|++|+++|++++..++..+..+..++.. ++....+|+...+. .
T Consensus 306 ~La~~La~~~~---g~~~~~~L~~Y~~eR~~~~~~~~~~s~~~~~l~~~--~~~~~~~R~~~~~~~~~~~~~~~~~~~~~ 380 (500)
T 2qa1_A 306 NLGWKLGAVVN---GTATEELLDSYHSERHAVGKRLLMNTQAQGLLFLS--GPEVQPLRDVLTELIQYGEVARHLAGMVS 380 (500)
T ss_dssp HHHHHHHHHHT---TSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--CGGGHHHHHHHHHHHTSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHc---CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CchHHHHHHHHHHhhcCHHHHHHHhhhhc
Confidence 99999998653 22347899999999999999999999888888864 34444555443221 2
Q ss_pred hcCCCCcchhhhhhcCCCCCCchhHHHHHH---------HHHHHH-hhhcccCCC
Q 009785 435 SLGGIFSSGPVSLLSGLNPRPLILVFHFFA---------VAIYGV-GRILLPFPS 479 (526)
Q Consensus 435 ~~g~~~~~~~~~~~~g~~~~p~~~~~h~~~---------~~l~~~-~~~l~~~~~ 479 (526)
..+..|..++ +..|.||.|+||+|+ .|+++. .|+|+.+..
T Consensus 381 g~~~~Y~~~~-----~~~~~~G~r~p~~~l~~~~~~~~l~d~~~~~~~~ll~~~~ 430 (500)
T 2qa1_A 381 GLEITYDVGT-----GSHPLLGKRMPALELTTATRETSSTELLHTARGVLLDLAD 430 (500)
T ss_dssp STTCCCCCCC-----CSCTTTTSBCCCCEEECSSCEEEHHHHTTTCCEEEEETTC
T ss_pred cCCCccCCCC-----CcCCcCCCCCCCCeeecCCCcEeHHHHhCCCeEEEEEeCC
Confidence 2455665432 235678999999865 788854 588887654
No 3
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=100.00 E-value=1.4e-44 Score=381.56 Aligned_cols=390 Identities=18% Similarity=0.179 Sum_probs=280.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECC
Q 009785 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDG 138 (526)
Q Consensus 59 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 138 (526)
+++||+||||||+||++|+.|+++|++|+|+||.+......++..++++++++|+++|+.+.+... ...... ...+
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~--~~~~~~--~~~~ 86 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPV--ETSTQG--HFGG 86 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSC--CEESEE--EETT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhc--cccccc--eecc
Confidence 468999999999999999999999999999999988777788999999999999999999887654 121111 1122
Q ss_pred eeeeecCCCcCCC-CCcccceeechHHHHHHHHHHHcCCCeEEEec-eEEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEE
Q 009785 139 NRTQISYPLEKFH-SDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTI 216 (526)
Q Consensus 139 ~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~-~v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV 216 (526)
.. ..+. ... ..+.++.++|..+++.|.+.+.+. +++++++ +|++++++++.+. |++.+.+| +.+++||+||
T Consensus 87 ~~--~~~~--~~~~~~~~~~~i~~~~l~~~L~~~~~~~-gv~v~~~~~v~~i~~~~~~v~-v~~~~~~g-~~~~~a~~vV 159 (499)
T 2qa2_A 87 RP--VDFG--VLEGAHYGVKAVPQSTTESVLEEWALGR-GAELLRGHTVRALTDEGDHVV-VEVEGPDG-PRSLTTRYVV 159 (499)
T ss_dssp EE--EEGG--GSTTCCCEEEEEEHHHHHHHHHHHHHHT-TCEEEESCEEEEEEECSSCEE-EEEECSSC-EEEEEEEEEE
T ss_pred ee--cccc--cCCCCCCceEecCHHHHHHHHHHHHHhC-CCEEEcCCEEEEEEEeCCEEE-EEEEcCCC-cEEEEeCEEE
Confidence 11 1111 111 123457889999999999999987 6899988 4999998877654 66655555 4578999999
Q ss_pred EeecCCccccccccCCCCCCccceeEEEEeccCCC-CCCccEEEecCCCcEEEEecCCCcEEEEEEeCCCC----CCCCC
Q 009785 217 VCDGCFSNLRRSLCNPKVDVPSCFVGLVLENCNLP-FENHGHVVLADPSPILFYPISSNEVRCLVDIPGQK----VPSIS 291 (526)
Q Consensus 217 ~ADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~----~~~~~ 291 (526)
+|||.+|.||++++++.++......++... ...+ .+....+++.++++++++|++++..++.+..+... ....+
T Consensus 160 gADG~~S~VR~~lg~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~g~~~~~P~~~g~~~~~~~~~~~~~~~~~~~~~ 238 (499)
T 2qa2_A 160 GCDGGRSTVRKAAGFDFPGTSASREMFLAD-IRGCEITPRPIGETVPLGMVMSAPLGDGVDRIIVCERGAPARRRTGPPP 238 (499)
T ss_dssp ECCCTTCHHHHHTTCCCCEECCCCCEEEEE-EESCCCCCEEEEEEETTEEEEEEECSSSCEEEEEEETTCCCCCCSSSCC
T ss_pred EccCcccHHHHHcCCCCCCCCCccEEEEEE-EEECCCCcceEEEECCCeEEEEEEcCCCEEEEEEEecCCCCccccCCCC
Confidence 999999999999988665443333333322 1121 12223456667788999999988777776653221 12345
Q ss_pred chHHHHHHHHhcCCCCChhhHHHHHhhhcCCCeEeccCCCCCCCCCCCCcEEEEccCCCcCCCCCchhHHHHHHHHHHHH
Q 009785 292 NGEMANYLKTVVAPQIPREIFHSFVAAVDGGNIKTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVILR 371 (526)
Q Consensus 292 ~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~grv~LiGDAAh~~~P~~G~G~n~al~Da~~La 371 (526)
.+++.+.+++.+.+.++.. +......|+.....+++|..|||+|+|||||.++|++|||||+||+||.+|+
T Consensus 239 ~~~~~~~l~~~~~~~~~~~---------~~~~~~~~~~~~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La 309 (499)
T 2qa2_A 239 YQEVAAAWQRLTGQDISHG---------EPVWVSAFGDPARQVSAYRRGRVLLAGDSAHVHLPAGGQGMNVSVQDSVNLG 309 (499)
T ss_dssp HHHHHHHHHHHHSCCCTTC---------EEEEEEEECCCEEECSCSEETTEEECGGGTEEECCCSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCcc---------ceeEEEEEeCCcEEcccccCCCEEEEecccccCCCccccchhhhHHHHHHHH
Confidence 6677777776654332210 1112345666666788999999999999999999999999999999999999
Q ss_pred HHHhhhcCCCChHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhHccCCchHHHHHHHHHHHH--------------HhcC
Q 009785 372 NLLRHLSNLNDAPALCNYLESFYTLRKPVASTINTLAGALYQVFSASPDEARKEMRQACFDY--------------LSLG 437 (526)
Q Consensus 372 ~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~a~~~~~~~~~~~~~~~~~lr~~~~~~--------------~~~g 437 (526)
|+|+.+.. +.+.+.+|++|+++|++++..++..+..+..++.. ++....+|+...+. ...+
T Consensus 310 ~~La~~l~---g~~~~~~L~~Ye~eR~~~~~~~~~~s~~~~~l~~~--~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~ 384 (499)
T 2qa2_A 310 WKLAAVVS---GRAPAGLLDTYHEERHPVGRRLLMNTQAQGMLFLS--GDEMQPLRDVLSELIRYDEVSRHLAGMVSGLD 384 (499)
T ss_dssp HHHHHHHT---TSSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CGGGHHHHHHHHHHHTSSHHHHHHHHHHHTTT
T ss_pred HHHHHHHc---CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CchHHHHHHHHHHhhcCHHHHHHHHHHHhCCC
Confidence 99997643 22346899999999999999999999888888864 44444555543322 2345
Q ss_pred CCCcchhhhhhcCCCCCCchhHHHHHH---------HHHHHH-hhhcccCCC
Q 009785 438 GIFSSGPVSLLSGLNPRPLILVFHFFA---------VAIYGV-GRILLPFPS 479 (526)
Q Consensus 438 ~~~~~~~~~~~~g~~~~p~~~~~h~~~---------~~l~~~-~~~l~~~~~ 479 (526)
..|..++ +..|.||.|+||+|+ .|+++. .|+|+.+..
T Consensus 385 ~~Y~~~~-----~~~~~~G~r~p~~~l~~~~~~~~l~d~~~~~~~~ll~~~~ 431 (499)
T 2qa2_A 385 IRYEVDG-----GDHPLLGMRMPHQELVRAHGKTSTTELLHPARGVLLDIAD 431 (499)
T ss_dssp CCCCCCS-----CSCTTTTSBCCCCEEECSSSEEETTGGGTTCSEEEEECSC
T ss_pred CccCCCC-----CCCCCCCCCCCCCeeecCCCceeHHHHhcCCeEEEEEecC
Confidence 5565431 235678999999975 677744 588887654
No 4
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=100.00 E-value=1.2e-44 Score=387.18 Aligned_cols=399 Identities=17% Similarity=0.149 Sum_probs=272.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceee--eeeEEEE-
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRV--FGYALFK- 136 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~--~~~~~~~- 136 (526)
++||+||||||+||++|+.|+++|++|+|+||++......++..+++++++.|+++|+.+.+.+...... .....+.
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 105 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWVTR 105 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEESS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEecc
Confidence 5899999999999999999999999999999998877778889999999999999999988766432211 0111111
Q ss_pred -CCee-eeecCCCc----CC-CCCcccceeechHHHHHHHHHHHcCCCeEEEec-eEEEEEeeCCeEEEEEEEe-CCCcE
Q 009785 137 -DGNR-TQISYPLE----KF-HSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKT-KAGEE 207 (526)
Q Consensus 137 -~~~~-~~~~~~~~----~~-~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~-~v~~l~~~~~~v~gv~v~~-~~G~~ 207 (526)
.+.. ....++.. .. .....++.++|..+++.|.+.+.+. ++++ +|+++++++++|. +++.+ .+|+.
T Consensus 106 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~----v~~~~~v~~~~~~~~~v~-v~~~~~~~G~~ 180 (549)
T 2r0c_A 106 VGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER----LRTRSRLDSFEQRDDHVR-ATITDLRTGAT 180 (549)
T ss_dssp BTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG----EECSEEEEEEEECSSCEE-EEEEETTTCCE
T ss_pred CCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh----cccCcEEEEEEEeCCEEE-EEEEECCCCCE
Confidence 1221 11222110 00 1122346788999999999999875 7777 4999998877665 55555 45766
Q ss_pred EEEEcCeEEEeecCCccccccccCCCCCCccceeEE--EEeccCCC-----CCCccEEEecCC-CcEEEEecCCCcEEEE
Q 009785 208 LTAYAPLTIVCDGCFSNLRRSLCNPKVDVPSCFVGL--VLENCNLP-----FENHGHVVLADP-SPILFYPISSNEVRCL 279 (526)
Q Consensus 208 ~~i~a~~vV~ADG~~S~vR~~l~~~~~~~~~~~~~~--~~~~~~~~-----~~~~~~~~~~~~-~~~~~~p~~~~~~~~~ 279 (526)
.+++||+||+|||.+|.||++++++..+.......+ .+...+++ .+...++++.++ ++++++|++++. .|.
T Consensus 181 ~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~p~~~~~-~~~ 259 (549)
T 2r0c_A 181 RAVHARYLVACDGASSPTRKALGIDAPPRHRTQVFRNILFRAPELRSLLGERAALFFFLMLSSSLRFPLRALDGRG-LYR 259 (549)
T ss_dssp EEEEEEEEEECCCTTCHHHHHHTCCCCBSSCCEEEEEEEEECTTHHHHHGGGCCSEEEEEEETTEEEEEEESSSSS-EEE
T ss_pred EEEEeCEEEECCCCCcHHHHHcCCCCCCCcccceEEEEEEECCchHHhcCCCCceEEEEECCCCcEEEEEEECCCc-EEE
Confidence 678999999999999999999988665443222222 22211110 111223444555 578889997643 344
Q ss_pred EEeCCCCCCCCCchHHHHHHHHhcCCCCChhhHHHHHhhhcCCCeEeccCCCCCCCCCCCCcEEEEccCCCcCCCCCchh
Q 009785 280 VDIPGQKVPSISNGEMANYLKTVVAPQIPREIFHSFVAAVDGGNIKTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGG 359 (526)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~grv~LiGDAAh~~~P~~G~G 359 (526)
+.++.+... .+.+++.+.+++.+.+.++.++ .....|+.....+++|..|||+|+|||||.++|++|||
T Consensus 260 ~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~----------~~~~~~~~~~~~a~~~~~grv~L~GDAAH~~~P~~GqG 328 (549)
T 2r0c_A 260 LTVGVDDAS-KSTMDSFELVRRAVAFDTEIEV----------LSDSEWHLTHRVADSFSAGRVFLTGDAAHTLSPSGGFG 328 (549)
T ss_dssp EEEECSTTC-CSCCCHHHHHHHHBCSCCCCEE----------EEEEEEEECCEECSCSEETTEEECGGGTEECCCGGGHH
T ss_pred EEecCCCCC-CCHHHHHHHHHHHhCCCCceeE----------EEEecchhHhhhHHhhcCCcEEEEccccccCCCccCCc
Confidence 444322112 5666778888877654332111 12345666667788999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhHccC--------CchHHHHHHHHHH
Q 009785 360 MTVALSDIVILRNLLRHLSNLNDAPALCNYLESFYTLRKPVASTINTLAGALYQVFSAS--------PDEARKEMRQACF 431 (526)
Q Consensus 360 ~n~al~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~a~~~~~~~~~~--------~~~~~~~lr~~~~ 431 (526)
||+||+||.+|+|+|+.+.+ +.+.+.+|++|+++|+|++..++..+..+...+... .++....+|+.+.
T Consensus 329 ~n~gi~DA~~La~~La~~l~---g~a~~~lL~~Y~~eR~~~a~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~ 405 (549)
T 2r0c_A 329 MNTGIGSAADLGWKLAATLR---GWAGPGLLATYEEERRPVAITSLEEANVNLRRTMDRELPPGLHDDGPRGERIRAAVA 405 (549)
T ss_dssp HHHHHHHHHHHHHHHHHHHH---TCSCTTTTHHHHHHHHHHHHHHHHC----------CCCCTTTTCCSHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccCcchHHHHHHHH
Confidence 99999999999999997642 122357999999999999999999999888877541 2455667777666
Q ss_pred HHH--------------hcCCCCcchhhhhhcC----------CCCCCchhHHHHHH------HHHHHHhhhcccCCC
Q 009785 432 DYL--------------SLGGIFSSGPVSLLSG----------LNPRPLILVFHFFA------VAIYGVGRILLPFPS 479 (526)
Q Consensus 432 ~~~--------------~~g~~~~~~~~~~~~g----------~~~~p~~~~~h~~~------~~l~~~~~~l~~~~~ 479 (526)
+++ .+|.+|..+++. .++ ..+.||.|+||+|+ .|+++.+|+|+.++.
T Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~-~~~~~~~~~~~~~~~~~~G~r~p~~~l~~g~~l~d~~~~~~~ll~~~~ 482 (549)
T 2r0c_A 406 EKLERSGARREFDAPGIHFGHTYRSSIVC-GEPETEVATGGWRPSARPGARAPHAWLTPTTSTLDLFGRGFVLLSFGT 482 (549)
T ss_dssp HHHHHTTGGGGGSCHHHHHCCCCCSTTSC-CC---------CCCCCCTTSBCCCCBSSSSCBGGGGCSSSEEEEEESC
T ss_pred HHHHhhcccccccccceEeccEeCCcccc-CCCCCCccccccCCCCCCCCcCCCcEeCCCcCHHHHcCCceEEEEcCC
Confidence 554 346778777765 222 13678999999875 678888888887543
No 5
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=100.00 E-value=8.1e-44 Score=387.42 Aligned_cols=392 Identities=19% Similarity=0.206 Sum_probs=270.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHh-----CCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEE
Q 009785 60 DADVIVVGAGVAGAALANTLAK-----DGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYAL 134 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~-----~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~ 134 (526)
++||+||||||+||++|+.|++ +|++|+||||++.+...+++..++++++++|+++|+++.+.... .+.....+
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gra~~l~~~tle~l~~lGl~~~l~~~~-~~~~~~~~ 86 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTLESLKNLGLADKILSEA-NDMSTIAL 86 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEECHHHHHHHHTTTCHHHHHTTC-BCCCEEEE
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCceeEEChHHHHHHHHCCCHHHHHHhc-cccceEEE
Confidence 5899999999999999999999 99999999999877777788899999999999999998886633 33445555
Q ss_pred EECCe--eee--ecCCCcC-CCCCcccceeechHHHHHHHHHHHcCC--CeEEEece-EEEEEeeC--------CeEEEE
Q 009785 135 FKDGN--RTQ--ISYPLEK-FHSDVAGRGFHNGRFVQRLREKAASLP--NVRLEQGT-VTSLLEEK--------GTIKGV 198 (526)
Q Consensus 135 ~~~~~--~~~--~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~a~~~~--~v~i~~~~-v~~l~~~~--------~~v~gv 198 (526)
|.... ... ..++... .........++|..+++.|.+.+.+.+ ++++++++ ++++.+++ ..| .|
T Consensus 87 ~~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~~~~~~~V-~v 165 (665)
T 1pn0_A 87 YNPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAYPV-TM 165 (665)
T ss_dssp EEECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTCTTCCCE-EE
T ss_pred EeCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCcccccCCCCCE-EE
Confidence 55321 111 0111100 011223457899999999999998874 58898885 99998764 233 35
Q ss_pred EEEe----------------------------------------CCCcEEEEEcCeEEEeecCCccccccccCCCCCCcc
Q 009785 199 QYKT----------------------------------------KAGEELTAYAPLTIVCDGCFSNLRRSLCNPKVDVPS 238 (526)
Q Consensus 199 ~v~~----------------------------------------~~G~~~~i~a~~vV~ADG~~S~vR~~l~~~~~~~~~ 238 (526)
++.+ .+|+..+++||+||+|||++|.||++++++..+...
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S~VR~~lg~~~~g~~~ 245 (665)
T 1pn0_A 166 TLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSWVRRTLGFEMIGEQT 245 (665)
T ss_dssp EEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCHHHHHHTCCCEEEEE
T ss_pred EEEecccccccccccccccccccccccccccccccccccccccCCCCceEEEEeCEEEeccCCCCHHHHhcCCCCCCCCc
Confidence 5554 356666799999999999999999999886544332
Q ss_pred ceeEEEEe---ccCCCCCCccE-EEecCCCcEEEEecCCCcEEEEEEeCCCC-------CCCCCchHHHHHHHHhcCCCC
Q 009785 239 CFVGLVLE---NCNLPFENHGH-VVLADPSPILFYPISSNEVRCLVDIPGQK-------VPSISNGEMANYLKTVVAPQI 307 (526)
Q Consensus 239 ~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~~~~~~~ 307 (526)
.....++. ..+.|...... ++..++++++++|.+++.+++++.++... ....+.+++.+.+++.+.+..
T Consensus 246 ~~~~~v~d~~~~~~~p~~~~~~~~~~~~~g~~~~~P~~~~~~r~~~~~~~~~~~~~~~~~~~~t~e~~~~~~~~~~~~~~ 325 (665)
T 1pn0_A 246 DYIWGVLDAVPASNFPDIRSRCAIHSAESGSIMIIPRENNLVRFYVQLQARAEKGGRVDRTKFTPEVVIANAKKIFHPYT 325 (665)
T ss_dssp EEEEEEEEEEEECCCTTTTSEEEEECSSSCEEEEEECSTTCEEEEEEECC----------CCCCHHHHHHHHHHHHTTSC
T ss_pred cEEEEEEEEEECCCCCCcceEEEEEeCCCceEEEEEcCCCEEEEEEEeCCccccccccCcCCCCHHHHHHHHHHHhCccc
Confidence 22211211 12333322222 22235688999999998888887765432 123455666666665544321
Q ss_pred ChhhHHHHHhhhcCCCeEeccCCCCCCCCCC-CCcEEEEccCCCcCCCCCchhHHHHHHHHHHHHHHHhhhcCCCChHHH
Q 009785 308 PREIFHSFVAAVDGGNIKTMPNRSMPAAPYP-TPGALLMGDAFNMRHPLTGGGMTVALSDIVILRNLLRHLSNLNDAPAL 386 (526)
Q Consensus 308 ~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~-~grv~LiGDAAh~~~P~~G~G~n~al~Da~~La~~L~~~~~~~~~~~~ 386 (526)
. .+ . .......++...+.+++|. .|||+|+|||||.++|++|||||+||+||.+|+|+|+.+.+ +.+.
T Consensus 326 ~-~~-----~--~~~~~~~~~~~~r~a~~~~~~gRV~L~GDAAH~~~P~~GqG~N~gi~DA~nLawkLa~vl~---g~a~ 394 (665)
T 1pn0_A 326 F-DV-----Q--QLDWFTAYHIGQRVTEKFSKDERVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKLGLVLT---GRAK 394 (665)
T ss_dssp C-EE-----E--EEEEEEEEEEEEEECSCSEETTTEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHHT---TCBC
T ss_pred C-ce-----e--eEEEEEeeeccceehhhcccCCCEEEEECccccCCCcccCCcchhHHHHHHHHHHHHHHHc---CCCc
Confidence 1 11 0 0112234455556688898 79999999999999999999999999999999999998653 2234
Q ss_pred HHHHHHHHHHhcchhHHHHHHHHHHHHhHccCCch--------HHHHHHHHH----HHHHhcCCCCcchhhhhhcC----
Q 009785 387 CNYLESFYTLRKPVASTINTLAGALYQVFSASPDE--------ARKEMRQAC----FDYLSLGGIFSSGPVSLLSG---- 450 (526)
Q Consensus 387 ~~~L~~Y~~~R~~~~~~~~~~a~~~~~~~~~~~~~--------~~~~lr~~~----~~~~~~g~~~~~~~~~~~~g---- 450 (526)
+.+|++|+++|++++..++..+..+.++|...+.. ....+.+.. ......+..|..+++...++
T Consensus 395 ~~lL~tYe~eR~p~a~~~i~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~Y~~s~l~~~~~~~~~ 474 (665)
T 1pn0_A 395 RDILKTYEEERQPFAQALIDFDHQFSRLFSGRPAKDVADEMGVSMDVFKEAFVKGNEFASGTAINYDENLVTDKKSSKQE 474 (665)
T ss_dssp GGGGHHHHHHHHHHHHHHHHHHHHHHHHHHSCBCSSTTCTTSBCHHHHHHHHHHHHHHHTTCCCCCCSBTTBCSTTCCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccchhHHHHHHHHHHhhccccccCcccCCCcccCCCccccc
Confidence 68999999999999999999999999988754210 122232222 11235778888877653211
Q ss_pred --CCCCCchhHHHHHH
Q 009785 451 --LNPRPLILVFHFFA 464 (526)
Q Consensus 451 --~~~~p~~~~~h~~~ 464 (526)
...+||.|+||+++
T Consensus 475 ~~~~~~~G~r~p~~~~ 490 (665)
T 1pn0_A 475 LAKNCVVGTRFKSQPV 490 (665)
T ss_dssp GBTTSCTTSBCCCCEE
T ss_pred cCCCCCCcCCCCCCeE
Confidence 23469999999875
No 6
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=100.00 E-value=4.2e-42 Score=354.89 Aligned_cols=357 Identities=17% Similarity=0.153 Sum_probs=256.3
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEE
Q 009785 56 ECPFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALF 135 (526)
Q Consensus 56 ~~~~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~ 135 (526)
..++++||+||||||+||++|+.|+++|++|+|+||++......++..+++++++.|+++|+++.+..... ......++
T Consensus 19 ~~~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~-~~~~~~~~ 97 (407)
T 3rp8_A 19 YFQGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGG-PLRRMAYR 97 (407)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSC-CCCEEEEE
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcC-CCcceEEE
Confidence 34457999999999999999999999999999999998777777889999999999999999988876432 33445555
Q ss_pred ECC-eeeeecCCCcCC--CCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEE
Q 009785 136 KDG-NRTQISYPLEKF--HSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAY 211 (526)
Q Consensus 136 ~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~ 211 (526)
... ......++.... .....++.++|..|.+.|.+.+.+ +++++++ |++++.+++. |++...+|+ +++
T Consensus 98 ~~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~---~~i~~~~~v~~i~~~~~~---v~v~~~~g~--~~~ 169 (407)
T 3rp8_A 98 DFRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR---DSVQFGKRVTRCEEDADG---VTVWFTDGS--SAS 169 (407)
T ss_dssp ETTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG---GGEEESCCEEEEEEETTE---EEEEETTSC--EEE
T ss_pred ECCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc---CEEEECCEEEEEEecCCc---EEEEEcCCC--EEe
Confidence 443 222222221110 012346788999999999999876 6677774 9999988874 556677887 477
Q ss_pred cCeEEEeecCCccccccc-cCCCCCCccceeEEEEe---ccCCCCCCccEEEecCCCcEEEEecCCCcEEEEEEeCCCCC
Q 009785 212 APLTIVCDGCFSNLRRSL-CNPKVDVPSCFVGLVLE---NCNLPFENHGHVVLADPSPILFYPISSNEVRCLVDIPGQKV 287 (526)
Q Consensus 212 a~~vV~ADG~~S~vR~~l-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 287 (526)
||+||+|||.+|.+|+.+ +.........+..+... ....+.......+++++++++++|++++...|.+.++....
T Consensus 170 a~~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 249 (407)
T 3rp8_A 170 GDLLIAADGSHSALRPWVLGFTPQRRYAGYVNWNGLVEIDEALAPGDQWTTFVGEGKQVSLMPVSAGRFYFFFDVPLPAG 249 (407)
T ss_dssp ESEEEECCCTTCSSHHHHHSSCCCCEEEEEEEEEEEEECCTTTCCTTEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT
T ss_pred eCEEEECCCcChHHHHHhcCCCCCCcccCcEEEEEEEecccccCCCCceEEEECCCcEEEEEEcCCCeEEEEEEeCCCcC
Confidence 999999999999999999 54322222112221111 11223334455677888899999999998888887754333
Q ss_pred CCCCchHHHHHHHHhcCCCCChhhHHHHHhhhcCCC---eEeccCCCCCCCCCCCCcEEEEccCCCcCCCCCchhHHHHH
Q 009785 288 PSISNGEMANYLKTVVAPQIPREIFHSFVAAVDGGN---IKTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVAL 364 (526)
Q Consensus 288 ~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~---i~~~~~~~~~~~~~~~grv~LiGDAAh~~~P~~G~G~n~al 364 (526)
...+.++..+.+.+.+. .+.+.+...+ ....... ...++... ..+|..+||+|+|||||.++|++|||+|+||
T Consensus 250 ~~~~~~~~~~~l~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~rv~LvGDAAh~~~P~~GqG~~~al 325 (407)
T 3rp8_A 250 LAEDRDTLRADLSRYFA-GWAPPVQKLI-AALDPQTTNRIEIHDIEP--FSRLVRGRVALLGDAGHSTTPDIGQGGCAAM 325 (407)
T ss_dssp CSCCTTTHHHHHHHHTT-TCCHHHHHHH-HHSCGGGCEEEEEEECCC--CSCCEETTEEECGGGTCCCCGGGSCHHHHHH
T ss_pred CCCCchhHHHHHHHHhc-CCChHHHHHH-HcCCccceeEEeeEecCC--CCceecCCEEEEEcccccCCcchhhhHHHHH
Confidence 33345566666666554 3444544433 3222222 23333332 3788899999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcCCCChHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhHccCCchHHHHHHHHHHH
Q 009785 365 SDIVILRNLLRHLSNLNDAPALCNYLESFYTLRKPVASTINTLAGALYQVFSASPDEARKEMRQACFD 432 (526)
Q Consensus 365 ~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~a~~~~~~~~~~~~~~~~~lr~~~~~ 432 (526)
+||.+|+++|... + ..+++|+.|+++|++++..++..+..+.+++... ++....+|+..++
T Consensus 326 ~da~~La~~L~~~-----~-~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~~-~~~~~~~R~~~l~ 386 (407)
T 3rp8_A 326 EDAVVLGAVFRQT-----R-DIAAALREYEAQRCDRVRDLVLKARKRCDITHGK-DMQLTEAWYQELR 386 (407)
T ss_dssp HHHHHHHHHHHSC-----C-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-THHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcC-----C-CHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcC-CHHHHHHHHHHHh
Confidence 9999999999853 1 4578999999999999999999999999999876 7778888887765
No 7
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=100.00 E-value=1.3e-42 Score=377.42 Aligned_cols=394 Identities=18% Similarity=0.182 Sum_probs=262.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHh-CCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEEC
Q 009785 59 FDADVIVVGAGVAGAALANTLAK-DGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKD 137 (526)
Q Consensus 59 ~~~dVvIVGaG~aGl~~A~~La~-~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 137 (526)
.++||+||||||+||++|+.|++ +|++|+|+||++......++..++++++++|+++|+.+.+.... .......++..
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~-~~~~~~~~~~~ 109 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEA-CWINDVTFWKP 109 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHS-EEECEEEEEEE
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhc-ccccceEEECC
Confidence 46899999999999999999999 99999999999887777788899999999999999998776543 23344445542
Q ss_pred -----Ceeee-ecCCCcC-CCCCcccceeechHHHHHHHHHHHcCC-CeEEEece-EEEEEeeCC---eEEEEEEEe---
Q 009785 138 -----GNRTQ-ISYPLEK-FHSDVAGRGFHNGRFVQRLREKAASLP-NVRLEQGT-VTSLLEEKG---TIKGVQYKT--- 202 (526)
Q Consensus 138 -----~~~~~-~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~a~~~~-~v~i~~~~-v~~l~~~~~---~v~gv~v~~--- 202 (526)
+.... ..++... .........++|..+++.|.+.+.+.+ ++++++++ |++++++++ ..+.|++.+
T Consensus 110 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~ 189 (639)
T 2dkh_A 110 DPGQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDA 189 (639)
T ss_dssp CTTSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSG
T ss_pred CCCCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccc
Confidence 21111 0111100 011223457889999999999999986 55888885 999987652 123366655
Q ss_pred -CCCcEEEEEcCeEEEeecCCccccccccCCCCCCcccee-EEEE--eccCCCCCCccEEEecCCCcEEEEecCCC-cEE
Q 009785 203 -KAGEELTAYAPLTIVCDGCFSNLRRSLCNPKVDVPSCFV-GLVL--ENCNLPFENHGHVVLADPSPILFYPISSN-EVR 277 (526)
Q Consensus 203 -~~G~~~~i~a~~vV~ADG~~S~vR~~l~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~ 277 (526)
.+|+..+++||+||+|||.+|.||++++++..+...... ++.- ...+.|.......+..++++++++|.+++ ..+
T Consensus 190 ~~~G~~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~P~~~~~~~r 269 (639)
T 2dkh_A 190 AHAGQIETVQARYVVGCDGARSNVRRAIGRQLVGDSANQAWGVMDVLAVTDFPDVRYKVAIQSEQGNVLIIPREGGHLVR 269 (639)
T ss_dssp GGTTCEEEEEEEEEEECCCTTCHHHHHTTCCCEECSCSCCEEEEEEEEEECCTTTTSEEEEEETTEEEEEEECTTSSCEE
T ss_pred cCCCCeEEEEeCEEEECCCcchHHHHHhCCCCCCCCccceEEEEEEEEccCCCccceeEEEEcCCceEEEEEcCCCcEEE
Confidence 367666789999999999999999999886543332211 2211 12234432222222236778899999887 677
Q ss_pred EEEEeCC--CC----CCCCCchHHHHHHHHhcCCCCChhhHHHHHhhhcCCCeEeccCCCCCCCCCC------------C
Q 009785 278 CLVDIPG--QK----VPSISNGEMANYLKTVVAPQIPREIFHSFVAAVDGGNIKTMPNRSMPAAPYP------------T 339 (526)
Q Consensus 278 ~~~~~~~--~~----~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~------------~ 339 (526)
+++.++. +. ....+.+++.+.+++.+.+... .+ ........++.....+.+|. .
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~-~~-------~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 341 (639)
T 2dkh_A 270 FYVEMDKLDADERVASRNITVEQLIATAQRVLHPYKL-EV-------KNVPWWSVYEIGQRICAKYDDVVDAVATPDSPL 341 (639)
T ss_dssp EEEECC-----------CCCHHHHHHHHHHHHTTSCE-EE-------EEEEEEEEECCCCEECSCSBSCCCSSCCTTSCC
T ss_pred EEEECCCcCcccccccCCCCHHHHHHHHHHHhCcccC-cc-------eeeeEEEecccccchhhhhhccccccccccCcc
Confidence 7776543 11 1224455666666554433110 11 00112234445555566776 8
Q ss_pred CcEEEEccCCCcCCCCCchhHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhHccCC
Q 009785 340 PGALLMGDAFNMRHPLTGGGMTVALSDIVILRNLLRHLSNLNDAPALCNYLESFYTLRKPVASTINTLAGALYQVFSASP 419 (526)
Q Consensus 340 grv~LiGDAAh~~~P~~G~G~n~al~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~a~~~~~~~~~~~ 419 (526)
|||+|+|||||.++|++|||||+||+||.+|+|+|+.+.+ +.+.+.+|++|+++|++++..++..+..+.+++...+
T Consensus 342 gRV~L~GDAAH~~~P~~GqG~n~ai~DA~nLawkLa~vl~---g~a~~~lL~~Ye~eR~~~a~~~~~~s~~~~~~~~~~~ 418 (639)
T 2dkh_A 342 PRVFIAGDACHTHSPKAGQGMNFSMQDSFNLGWKLAAVLR---KQCAPELLHTYSSERQVVAQQLIDFDREWAKMFSDPA 418 (639)
T ss_dssp CCEEECGGGTEECCGGGCCTTHHHHHHHHHHHHHHHHHHT---TSBCGGGGHHHHHHHHHHHHHHHHHHHHSCC------
T ss_pred CcEEEEecccccCCCcccccchhhHHHHHHHHHHHHHHHc---CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999999999998653 2234679999999999999999999988877776432
Q ss_pred ch------HHHHHHH----HHHHHHhcCCCCcchhhhhhcC-----CCCCCchhHHHHHH
Q 009785 420 DE------ARKEMRQ----ACFDYLSLGGIFSSGPVSLLSG-----LNPRPLILVFHFFA 464 (526)
Q Consensus 420 ~~------~~~~lr~----~~~~~~~~g~~~~~~~~~~~~g-----~~~~p~~~~~h~~~ 464 (526)
.. ....+.+ .......++.+|..+++...++ ...+||.|+||.|+
T Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~Y~~s~l~~~~~~~~~~~~~~~G~r~p~~~~ 478 (639)
T 2dkh_A 419 KEGGQGGVDPKEFQKYFEQHGRFTAGVGTHYAPSLLTGQAKHQALASGFTVGMRFHSAPV 478 (639)
T ss_dssp --------CHHHHHHHHHHHHHHHTTCCCCCCSSSSSCCCTTGGGBTTSCTTSBCCCCEE
T ss_pred cccccccccHHHHHHHHHHhccccccCCcccCCCCccCCCCccccCCCCCCcCCCCCCeE
Confidence 10 0112222 2212235788898877653211 12468999999875
No 8
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=100.00 E-value=1.6e-41 Score=363.01 Aligned_cols=399 Identities=18% Similarity=0.184 Sum_probs=271.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECC
Q 009785 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDG 138 (526)
Q Consensus 59 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 138 (526)
+++||+||||||+||++|+.|+++|++|+||||.+......++..+++++++.|+++|+++.+........ +. .+ .+
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~-~~-~~-~~ 124 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAK-GL-PF-AG 124 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCS-BC-CB-TT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccC-Cc-ee-CC
Confidence 46899999999999999999999999999999998877788899999999999999999988876543221 10 01 11
Q ss_pred eeeeecCCCcCC-CCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEE
Q 009785 139 NRTQISYPLEKF-HSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTI 216 (526)
Q Consensus 139 ~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV 216 (526)
.. ...+..... ...+.++.+++..+++.|.+.+.+. ++++++++ |++++++++.+. |++.+.+|+ .+++||+||
T Consensus 125 ~~-~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~-gv~i~~~~~v~~l~~~~~~v~-v~~~~~~G~-~~~~a~~vV 200 (570)
T 3fmw_A 125 IF-TQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREA-GAEIPRGHEVTRLRQDAEAVE-VTVAGPSGP-YPVRARYGV 200 (570)
T ss_dssp BC-TTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHH-TEECCBSCEEEECCBCSSCEE-EEEEETTEE-EEEEESEEE
T ss_pred cc-cccccccccCCCCCeeEEeCHHHHHHHHHHHHHhC-CCEEEeCCEEEEEEEcCCeEE-EEEEeCCCc-EEEEeCEEE
Confidence 10 001111111 1223456789999999999999886 79999884 999998877654 665557774 468899999
Q ss_pred EeecCCccccccccCCCCCCccceeEEEEeccCCCCCC-ccEEEecCCCcEEE-EecCCCcE-EEEEEeCCCC----CCC
Q 009785 217 VCDGCFSNLRRSLCNPKVDVPSCFVGLVLENCNLPFEN-HGHVVLADPSPILF-YPISSNEV-RCLVDIPGQK----VPS 289 (526)
Q Consensus 217 ~ADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~p~~~~~~-~~~~~~~~~~----~~~ 289 (526)
+|||.+|.+|+++++..+.......+++.. ...+.+. ...+...+.+++++ +|++++.. ++++..+... ...
T Consensus 201 ~ADG~~S~vR~~lGi~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~G~~~~~~P~~~g~~~~i~~~~~~~~~~~~~~~ 279 (570)
T 3fmw_A 201 GCDGGRSTVRRLAADRFPGTEATVRALIGY-VTTPEREVPRRWERTPDGILVLAFPPEGGLGPGWSSSSTGHSPAADEGP 279 (570)
T ss_dssp ECSCSSCHHHHHTTCCCCCCCCCEEEEEEE-CCCCSCSSCCCCCCCCSSCEEECCCC------CEEEEEESCC-----CC
T ss_pred EcCCCCchHHHHcCCCCccceeeeEEEEEE-EEecCCCcceEEEecCCEEEEEEeecCCCeEEEEEEEeCCCCccccccC
Confidence 999999999999998776666555555443 2222222 11123445567777 89988876 6776554221 123
Q ss_pred CCchHHHHHHHHhcCCCCChhhHHHHHhhhcCC-CeEeccCCCCCCCCCCCCcEEEEccCCCcCCCCCchhHHHHHHHHH
Q 009785 290 ISNGEMANYLKTVVAPQIPREIFHSFVAAVDGG-NIKTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIV 368 (526)
Q Consensus 290 ~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~-~i~~~~~~~~~~~~~~~grv~LiGDAAh~~~P~~G~G~n~al~Da~ 368 (526)
.+.+++.+.+++.+...+. ..+.. ....|+.....+.+|..|||+|+|||||.++|++|||+|+||+||.
T Consensus 280 ~~~~~~~~~l~~~~~~~~~---------~~~~~~~~~~~~~~~~~a~~~~~grv~LvGDAAH~~~P~~GqG~n~gl~DA~ 350 (570)
T 3fmw_A 280 VTLEDLGAAVARVRGTPLT---------LTEPVSWLSRFGDASRQAKRYRSGRVLLAGDAAHVHFPIGGQGLNTGLQDAV 350 (570)
T ss_dssp CCHHHHHHHTTSSSSCCCC---------CCSCCEEEEEECCCCEECSCSEETTEEECGGGTEECCCCSSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhcccc---------cceeeeeeEEeecccccccccccCCEEEEEecceecCCCcCcCHhHHHHHHH
Confidence 3445555555443322111 11222 4567888888889999999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCCChHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhHccCCchHHHHHHHHHHHHH--------------
Q 009785 369 ILRNLLRHLSNLNDAPALCNYLESFYTLRKPVASTINTLAGALYQVFSASPDEARKEMRQACFDYL-------------- 434 (526)
Q Consensus 369 ~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~a~~~~~~~~~~~~~~~~~lr~~~~~~~-------------- 434 (526)
+|+|+|+.+.. +.+.+.+|++|+++|++++..++..+..+.++|... ......+|+..+..+
T Consensus 351 ~La~~La~~~~---g~~~~~lL~~Ye~eR~~~~~~~~~~s~~~~~l~~~~-~~~~~~lR~~~~~l~~~~~~~~~~~~~~~ 426 (570)
T 3fmw_A 351 NLGWKLAARVR---GWGSEELLDTYHDERHPVAERVLLNTRAQLALMRPD-EQHTTPLRGFVEELLGTDEVNRYFTGMIT 426 (570)
T ss_dssp HHHHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSC-TTTHHHHHHHHHHHTTSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHc---CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-chHHHHHHHHHHHHhcCHHHHHHHHHHHh
Confidence 99999997642 123368999999999999999999999999998764 333667777655432
Q ss_pred hcCCCCcchhhhhhcC-CCCCCchhHHHHH----------HHHHHHHh-hhcccCCC
Q 009785 435 SLGGIFSSGPVSLLSG-LNPRPLILVFHFF----------AVAIYGVG-RILLPFPS 479 (526)
Q Consensus 435 ~~g~~~~~~~~~~~~g-~~~~p~~~~~h~~----------~~~l~~~~-~~l~~~~~ 479 (526)
.++.+|..+ ....+. -.|.+|.|+|++. +.+++..+ ++|+.+..
T Consensus 427 g~~~~Y~~~-~~~~~~~~~~~~G~r~pd~~l~~~~g~~~~l~~~l~~~~~~ll~~~~ 482 (570)
T 3fmw_A 427 GTDVRYATF-APAASARPHPWPGRFAGGLVLSRPSGEPVPVAELLRSARPLLLDLAG 482 (570)
T ss_dssp STTCCCCCS-CC----CCCSSTTCBCTTCEECCSTTCCEEHHHHSTTCCCEEECSSC
T ss_pred CCCcccCCC-CCCCCCCCCccccCcCCCceeecCCCcceeHHHHhcCCeEEEEEecC
Confidence 234455432 000001 2455677777663 45666543 77776543
No 9
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=100.00 E-value=5.7e-41 Score=345.45 Aligned_cols=358 Identities=21% Similarity=0.233 Sum_probs=250.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCe
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 139 (526)
++||+||||||+|+++|+.|+++|++|+|+||++......++..+.+++.+.|+++|+.+.+.... ....+..++....
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~-~~~~~~~~~~~~g 84 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRG-GRVRHELEVYHDG 84 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTT-CEEECEEEEEETT
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhC-CCcceeEEEeCCC
Confidence 489999999999999999999999999999999776666788899999999999999988776533 2334444444322
Q ss_pred eeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEe
Q 009785 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVC 218 (526)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~A 218 (526)
.....++.........++.++|..+.+.|.+.+.+.+++++++++ |++++.+++++.+ .++..+|+ +++||+||+|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g-~v~~~~g~--~~~ad~vV~A 161 (399)
T 2x3n_A 85 ELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAID-QVRLNDGR--VLRPRVVVGA 161 (399)
T ss_dssp EEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEE-EEEETTSC--EEEEEEEEEC
T ss_pred CEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEE-EEEECCCC--EEECCEEEEC
Confidence 111222222222223457789999999999999987789999885 9999987775420 45566776 4779999999
Q ss_pred ecCCccccccccCCCCCC--ccce--eEEEEe-ccCCCCCCccEEEecC-CCcEEEEecCCCcEEEEEEeCCCCCC----
Q 009785 219 DGCFSNLRRSLCNPKVDV--PSCF--VGLVLE-NCNLPFENHGHVVLAD-PSPILFYPISSNEVRCLVDIPGQKVP---- 288 (526)
Q Consensus 219 DG~~S~vR~~l~~~~~~~--~~~~--~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~---- 288 (526)
||.+|.+|+.++...... .... .++... ..+.+.. . .++.+ +++++++|++++...|.+.++.+...
T Consensus 162 dG~~s~vr~~lg~~~~~~~p~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 238 (399)
T 2x3n_A 162 DGIASYVRRRLLDIDVERRPYPSPMLVGTFALAPCVAERN--R-LYVDSQGGLAYFYPIGFDRARLVVSFPREEARELMA 238 (399)
T ss_dssp CCTTCHHHHHTSCCCCCCCCCSSCEEEEEEECCHHHHHCE--E-EEECTTSCEEEEEEETTTEEEEEEECCHHHHHHHHH
T ss_pred CCCChHHHHHhCCCccccCCCCCCceEEEEEEecCCCCCc--c-EEEcCCCcEEEEEEcCCCEEEEEEEeCccccccccc
Confidence 999999999998754333 2222 333221 1112221 3 56677 78999999988766666644422110
Q ss_pred CCCchHHHHHHHHhcCCCCChhhH-HHHHhhhcCCCeEeccCCC-CCCCCCCCCcEEEEccCCCcCCCCCchhHHHHHHH
Q 009785 289 SISNGEMANYLKTVVAPQIPREIF-HSFVAAVDGGNIKTMPNRS-MPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSD 366 (526)
Q Consensus 289 ~~~~~~~~~~l~~~~~~~~~~~l~-~~~~~~~~~~~i~~~~~~~-~~~~~~~~grv~LiGDAAh~~~P~~G~G~n~al~D 366 (526)
..+.+++.+.+.. +++.+. ..+ +......+..++... ....+|..+||+|+|||||.++|++|||+|+||+|
T Consensus 239 ~~~~~~~~~~~~~-----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~rv~lvGDAAh~~~P~~GqG~~~al~d 312 (399)
T 2x3n_A 239 DTRGESLRRRLQR-----FVGDESAEAI-AAVTGTSRFKGIPIGYLNLDRYWADNVAMLGDAIHNVHPITGQGMNLAIED 312 (399)
T ss_dssp STTSHHHHHHHHT-----TCCGGGHHHH-HTCCCSTTCEECCCCCEECSCSEETTEEECGGGTEECCGGGCCHHHHHHHH
T ss_pred cCCHHHHHHHHhh-----cCCcchhhHH-hcCCccceEEechhhcccccccccCcEEEEechhccCCCcccccHHHHHHH
Confidence 1234455555542 333442 223 222222445667666 56778999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcCCCChHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhHccCCchHHHHHHHHHHHHH
Q 009785 367 IVILRNLLRHLSNLNDAPALCNYLESFYTLRKPVASTINTLAGALYQVFSASPDEARKEMRQACFDYL 434 (526)
Q Consensus 367 a~~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~a~~~~~~~~~~~~~~~~~lr~~~~~~~ 434 (526)
|.+|+++|...... +.+.+++|++|+++|++++..++..+..+.+++... ++....+ +..+..+
T Consensus 313 a~~La~~L~~~~~~--~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~~-~~~~~~~-~~~~~~~ 376 (399)
T 2x3n_A 313 ASALADALDLALRD--ACALEDALAGYQAERFPVNQAIVSYGHALATSLEDR-QRFAGVF-DTALQGS 376 (399)
T ss_dssp HHHHHHHHHHHHTT--SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH-HHHHHHH-HC-----
T ss_pred HHHHHHHHHhhhcc--cchHHHHHHHHHHHhccHHHHHHHHHHHhhhhhccc-CchHHHH-HHHHhhh
Confidence 99999999976431 223578999999999999999999999999988765 5555666 6655544
No 10
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=100.00 E-value=1.8e-39 Score=334.94 Aligned_cols=341 Identities=16% Similarity=0.184 Sum_probs=213.3
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCccc--ceeeCcchHHHHHHcCCcchhhcccce--ee-eeeEEE
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIV--GELLQPGGYLKLIELGLEDCVEQIDAQ--RV-FGYALF 135 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~--g~~l~~~~~~~l~~lGl~~~l~~~~~~--~~-~~~~~~ 135 (526)
.+|+||||||+||++|+.|+++|++|+|+||++.+..+.. +..++++++++|+++|+.+.+..+... .. ....++
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~~ 81 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSRFY 81 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcceeEe
Confidence 5799999999999999999999999999999987765544 566789999999999998766543211 11 112222
Q ss_pred ECCeeeeec-CCCc---CCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEE
Q 009785 136 KDGNRTQIS-YPLE---KFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTA 210 (526)
Q Consensus 136 ~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i 210 (526)
......... .... ..........++|..|.+.|.+.+. ..+++++ ++++++.++. +|++..+||++ +
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~----~~v~~~~~v~~~~~~~~~--~v~v~~~dG~~--~ 153 (412)
T 4hb9_A 82 NERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGLA----NTIQWNKTFVRYEHIENG--GIKIFFADGSH--E 153 (412)
T ss_dssp CTTSCEEEC--------------CEEEEEHHHHHHHHHTTCT----TTEECSCCEEEEEECTTS--CEEEEETTSCE--E
T ss_pred cCCcceecccCCccccccccccccceEeeHHHHHHHHHhhcc----ceEEEEEEEEeeeEcCCC--eEEEEECCCCE--E
Confidence 221111110 0000 0011122356889999998877542 3467774 9999876543 35677888974 6
Q ss_pred EcCeEEEeecCCccccccccCCCCCCccceeEEEEecc-------CCCC---CCccEEEec-CCCcE------------E
Q 009785 211 YAPLTIVCDGCFSNLRRSLCNPKVDVPSCFVGLVLENC-------NLPF---ENHGHVVLA-DPSPI------------L 267 (526)
Q Consensus 211 ~a~~vV~ADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~-------~~~~---~~~~~~~~~-~~~~~------------~ 267 (526)
+||+||+|||.+|.||+++++...........+..... ..+. ......++. .+... .
T Consensus 154 ~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (412)
T 4hb9_A 154 NVDVLVGADGSNSKVRKQYLPFIERFDVGVSMIIGRARLTPALTALLPQNFRDGTPNSIVPKSPDWLFISMWRAPVNIHV 233 (412)
T ss_dssp EESEEEECCCTTCHHHHHHSTTCCCEEEEEEEEEEEEECCHHHHHHSCGGGTSSCCEEECCSSSEEEEEEEEEEESCTTS
T ss_pred EeeEEEECCCCCcchHHHhCCCccccccceeEEEEEEecchhhhcchhhhhccCCcceEeecCCCcceeeeeecCCceeE
Confidence 79999999999999999998755443322222221100 0000 000011111 11111 1
Q ss_pred EEecCCCc--EEEEEEeCCC----CCCCCCchHHHHHHHHhcCCCCChhhHHHHHhhhcCCCeEeccCCC-CCCCCCCCC
Q 009785 268 FYPISSNE--VRCLVDIPGQ----KVPSISNGEMANYLKTVVAPQIPREIFHSFVAAVDGGNIKTMPNRS-MPAAPYPTP 340 (526)
Q Consensus 268 ~~p~~~~~--~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~-~~~~~~~~g 340 (526)
.++..... ..|.+....+ .....+.+...+.+++.+. .+.+.+...+ ...+...+..+.... .+..+|..|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~li-~~~~~~~~~~~~~~~~~~~~~~~~g 311 (412)
T 4hb9_A 234 EASLAEIDNFIVWVYVAATDSLPDNITDFSAEALCDLVQSRMI-SWDPSLHTLV-QQSDMENISPLHLRSMPHLLPWKSS 311 (412)
T ss_dssp CGGGCCEEEEEEEEEEEEGGGSCTTGGGCCHHHHHHHHHHHTT-TSCHHHHHHH-HTSCTTCCEEEEEEECCCCCCCCCC
T ss_pred EEeccCCCceEEEEEecccccccccccccchHHHHHHHHHHhc-cCChHHHHHH-Hhcccceeccchhcccccccccccc
Confidence 11111111 1122222111 1223445566666666544 3455555443 333333444444333 245679999
Q ss_pred cEEEEccCCCcCCCCCchhHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHHHhcchhHHHHHHHHHHHH
Q 009785 341 GALLMGDAFNMRHPLTGGGMTVALSDIVILRNLLRHLSNLNDAPALCNYLESFYTLRKPVASTINTLAGALYQ 413 (526)
Q Consensus 341 rv~LiGDAAh~~~P~~G~G~n~al~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~a~~~~~ 413 (526)
||+|+|||||.++|++|||+|+||+||.+|+|+|+.+.. +..+++++|++|+++|+|++..++..|....+
T Consensus 312 rv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~~~--~~~~~~~aL~~Ye~~R~~~~~~~~~~s~~~~~ 382 (412)
T 4hb9_A 312 TVTLLGDAIHNMTPMTGSGANTALRDALLLTQKLASVAS--GHEELVKAISDYEQQMRAYANEIVGISLRSAQ 382 (412)
T ss_dssp SEEECTHHHHCSSCCSSSHHHHHHHHHHHHHHHHHHHHT--TSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEcccccCCCchhhHHHHHHHHHHHHHHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999997643 23446789999999999999999988876654
No 11
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=100.00 E-value=8.9e-39 Score=328.48 Aligned_cols=375 Identities=19% Similarity=0.204 Sum_probs=245.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCC--CCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEEC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSE--PDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKD 137 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~--~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 137 (526)
++||+||||||+|+++|+.|+++|++|+|+||.+.. ....++..+.+++++.|+++|+.+.+.... .+..+..++..
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~-~~~~~~~~~~~ 80 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDG-LVHEGVEIAFA 80 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHC-EEESCEEEEET
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcC-CccceEEEEEC
Confidence 479999999999999999999999999999998642 123344569999999999999998876533 34455555555
Q ss_pred CeeeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEE
Q 009785 138 GNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTI 216 (526)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV 216 (526)
+......++ .......++.+++..+.+.|.+.+.+. ++++++++ |+++.++++....|++. .+|++.+++||+||
T Consensus 81 ~~~~~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~-g~~i~~~~~v~~i~~~~~~~~~v~~~-~~g~~~~~~a~~vV 156 (394)
T 1k0i_A 81 GQRRRIDLK--RLSGGKTVTVYGQTEVTRDLMEAREAC-GATTVYQAAEVRLHDLQGERPYVTFE-RDGERLRLDCDYIA 156 (394)
T ss_dssp TEEEEECHH--HHHTSCCEEECCHHHHHHHHHHHHHHT-TCEEESSCEEEEEECTTSSSCEEEEE-ETTEEEEEECSEEE
T ss_pred CceEEeccc--cccCCCceEEechHHHHHHHHHHHHhc-CCeEEeceeEEEEEEecCCceEEEEe-cCCcEEEEEeCEEE
Confidence 543332221 111123455678888999999998887 78999885 99998764322235442 36765578899999
Q ss_pred EeecCCccccccccCCCCCCccce--eEEEEeccCCCC-CCccEEEecCCCcEEEEecCCCcEEEEEEeCCCC-CCCCCc
Q 009785 217 VCDGCFSNLRRSLCNPKVDVPSCF--VGLVLENCNLPF-ENHGHVVLADPSPILFYPISSNEVRCLVDIPGQK-VPSISN 292 (526)
Q Consensus 217 ~ADG~~S~vR~~l~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~ 292 (526)
+|||.+|.+|++++.......... ..+.......+. .....+...+++..++.+.+++..+|.+..+... ...++.
T Consensus 157 ~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (394)
T 1k0i_A 157 GCDGFHGISRQSIPAERLKVFERVYPFGWLGLLADTPPVSHELIYANHPRGFALCSQRSATRSQYYVQVPLSEKVEDWSD 236 (394)
T ss_dssp ECCCTTCSTGGGSCGGGCEEEEEEEEEEEEEEEESSCCSCSSCEEECCTTCCEEEEEEETTEEEEEEEECTTCCGGGCCH
T ss_pred ECCCCCcHHHHhcCccccccccccccceeEEEecCCCCCccceEEEEcCCceEEEEecCCCcEEEEEEeCCCCCccccCH
Confidence 999999999999875421110011 111111112221 1222222334456666666666677777665332 223344
Q ss_pred hHHHHHHHHhcCCCCChhhHHHHHhhhcCC---CeEeccCCCCCCCCCCCCcEEEEccCCCcCCCCCchhHHHHHHHHHH
Q 009785 293 GEMANYLKTVVAPQIPREIFHSFVAAVDGG---NIKTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVI 369 (526)
Q Consensus 293 ~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~---~i~~~~~~~~~~~~~~~grv~LiGDAAh~~~P~~G~G~n~al~Da~~ 369 (526)
++..+.+.+.+ ..... ..+... ....++.......+|..|||+|+|||||.++|++|||+|+||+||.+
T Consensus 237 ~~~~~~l~~~~----~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~~~ai~da~~ 308 (394)
T 1k0i_A 237 ERFWTELKARL----PSEVA----EKLVTGPSLEKSIAPLRSFVVEPMQHGRLFLAGDAAHIVPPTGAKGLNLAASDVST 308 (394)
T ss_dssp HHHHHHHHHTS----CHHHH----HHCCCCCEEEEEEEEEEEEEEECSEETTEEECGGGTEECCGGGTCHHHHHHHHHHH
T ss_pred HHHHHHHHHhh----Ccccc----cccccCcceeeEEEEhhhhhccccccCCEEEEechhhcCCCcccchHHHHHHHHHH
Confidence 44444454432 22111 111111 11233444444667889999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCChHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhHccC--CchHHHHHHHHHHHHHhcCCCCcchhhhh
Q 009785 370 LRNLLRHLSNLNDAPALCNYLESFYTLRKPVASTINTLAGALYQVFSAS--PDEARKEMRQACFDYLSLGGIFSSGPVSL 447 (526)
Q Consensus 370 La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~a~~~~~~~~~~--~~~~~~~lr~~~~~~~~~g~~~~~~~~~~ 447 (526)
|+++|...... ..+++|+.|+++|++++..++..+..+..++... .++....+|+.++..+.......+..+..
T Consensus 309 La~~L~~~~~~----~~~~~L~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~ 384 (394)
T 1k0i_A 309 LYRLLLKAYRE----GRGELLERYSAICLRRIWKAERFSWWMTSVLHRFPDTDAFSQRIQQTELEYYLGSEAGLATIAEN 384 (394)
T ss_dssp HHHHHHHHHHH----CCGGGGGGHHHHHHHHHHHHHHHHHHHHHHHSCCTTCCHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHhcc----CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcCCHHHHHHHHHH
Confidence 99999865311 1247899999999999999998888877776633 25677888998888776444333333344
Q ss_pred hcCC
Q 009785 448 LSGL 451 (526)
Q Consensus 448 ~~g~ 451 (526)
++|+
T Consensus 385 ~~g~ 388 (394)
T 1k0i_A 385 YVGL 388 (394)
T ss_dssp HSCC
T ss_pred hcCC
Confidence 4444
No 12
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=100.00 E-value=8.1e-38 Score=323.04 Aligned_cols=361 Identities=19% Similarity=0.198 Sum_probs=223.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCe-EEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEEC
Q 009785 59 FDADVIVVGAGVAGAALANTLAKDGRR-VHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKD 137 (526)
Q Consensus 59 ~~~dVvIVGaG~aGl~~A~~La~~G~~-V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 137 (526)
.++||+||||||+||++|+.|+++|++ |+|+||++.......+..+++++++.|+++|+.+.+..... +...+.++..
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~-~~~~~~~~~~ 81 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAI-PTHELRYIDQ 81 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSE-EECEEEEECT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCC-CcceEEEEcC
Confidence 468999999999999999999999999 99999998766677788899999999999999887766432 3333444432
Q ss_pred CeeeeecCCCc-CCCCCcccceeechHHHHHHHHHHHcC-CCeEEEec-eEEEEEeeCCeEEEEEEEe-CCCcEEEEEcC
Q 009785 138 GNRTQISYPLE-KFHSDVAGRGFHNGRFVQRLREKAASL-PNVRLEQG-TVTSLLEEKGTIKGVQYKT-KAGEELTAYAP 213 (526)
Q Consensus 138 ~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~a~~~-~~v~i~~~-~v~~l~~~~~~v~gv~v~~-~~G~~~~i~a~ 213 (526)
........+.. ..........++|..|.+.|.+.+.+. +.++++++ +|+++.+ ++++. |++.+ .+|+..+++||
T Consensus 82 ~g~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~v~-v~~~~~~~g~~~~~~ad 159 (410)
T 3c96_A 82 SGATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDGRV-LIGARDGHGKPQALGAD 159 (410)
T ss_dssp TSCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETTEE-EEEEEETTSCEEEEEES
T ss_pred CCCEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCccE-EEEecCCCCCceEEecC
Confidence 22111111110 001122346789999999999998763 45677777 4999988 55443 44443 24755578899
Q ss_pred eEEEeecCCccccccccCCCCCCccceeEEEEe----ccCCCCCCccEEEecC--CCcEEEEecCC-----C--cEEEEE
Q 009785 214 LTIVCDGCFSNLRRSLCNPKVDVPSCFVGLVLE----NCNLPFENHGHVVLAD--PSPILFYPISS-----N--EVRCLV 280 (526)
Q Consensus 214 ~vV~ADG~~S~vR~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~~~p~~~-----~--~~~~~~ 280 (526)
+||+|||.+|.+|+.++..... ..+.+...+ ...........++++. ++++++||+++ + ...|.+
T Consensus 160 ~vV~AdG~~S~vR~~l~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~w~~ 237 (410)
T 3c96_A 160 VLVGADGIHSAVRAHLHPDQRP--LSHGGITMWRGVTEFDRFLDGKTMIVANDEHWSRLVAYPISARHAAEGKSLVNWVC 237 (410)
T ss_dssp EEEECCCTTCHHHHHHCTTCCC--CEEEEEEEEEEEEEESCCTTSSEEEEEECTTCCEEEEEECCHHHHTTTCEEEEEEE
T ss_pred EEEECCCccchhHHHhcCCCCC--CCcCCeeEEEeecccccccCCCeEEEecCCCCcEEEEEecCCcccCCCCcEEEEEE
Confidence 9999999999999999754321 223332221 1111112233444443 56888999863 3 234444
Q ss_pred EeCCC------CCCCC----CchHHHHHHHHhcCCCCChhhHHHHHhhhcCCCeEeccCCCC-CCCCCCCCcEEEEccCC
Q 009785 281 DIPGQ------KVPSI----SNGEMANYLKTVVAPQIPREIFHSFVAAVDGGNIKTMPNRSM-PAAPYPTPGALLMGDAF 349 (526)
Q Consensus 281 ~~~~~------~~~~~----~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~-~~~~~~~grv~LiGDAA 349 (526)
..+.. ....+ ..+++.+.+..+..+. ..+...+ ... ..+..++.... +.++|..|||+|+||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~i-~~~--~~~~~~~~~~~~~~~~~~~grv~LvGDAA 312 (410)
T 3c96_A 238 MVPSAAVGQLDNEADWNRDGRLEDVLPFFADWDLGW--FDIRDLL-TRN--QLILQYPMVDRDPLPHWGRGRITLLGDAA 312 (410)
T ss_dssp EEEHHHHCCCCSSCCTTCBCCHHHHHHHHTTCCBTT--BCHHHHH-HTC--SEEEEEEEEECCCCSCCCBTTEEECTHHH
T ss_pred EecCcccccCCCccccCCCCCHHHHHHHhcCCCCch--hHHHHHH-hcC--cccceeecccCCCccccccCCEEEEeccc
Confidence 43211 11111 1223333222211110 0122222 111 23445554332 45789999999999999
Q ss_pred CcCCCCCchhHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHHHhcchhHHHHHHHH-HHHHh--HccCC-chHHHH
Q 009785 350 NMRHPLTGGGMTVALSDIVILRNLLRHLSNLNDAPALCNYLESFYTLRKPVASTINTLAG-ALYQV--FSASP-DEARKE 425 (526)
Q Consensus 350 h~~~P~~G~G~n~al~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~a~-~~~~~--~~~~~-~~~~~~ 425 (526)
|.++|++|||+|+||+||.+|+++|... .+.+++|++|+++|++++..++..++ .++.+ +.... +...+.
T Consensus 313 h~~~P~~GqG~n~ai~Da~~La~~L~~~------~~~~~~L~~Ye~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 386 (410)
T 3c96_A 313 HLMYPMGANGASQAILDGIELAAALARN------ADVAAALREYEEARRPTANKIILANREREKEEWAAASRPKTEKSAA 386 (410)
T ss_dssp HCCCSSTTCTHHHHHHHHHHHHHHHHHC------SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------
T ss_pred CCCCCccchhHHHHHHHHHHHHHHHhcc------CCHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhhhhccCCCCHHH
Confidence 9999999999999999999999999863 13578999999999999999888776 44555 22222 345566
Q ss_pred HHHHHHHHHh
Q 009785 426 MRQACFDYLS 435 (526)
Q Consensus 426 lr~~~~~~~~ 435 (526)
+++.+.+|..
T Consensus 387 ~~~~~~~~~~ 396 (410)
T 3c96_A 387 LEAITGSYRN 396 (410)
T ss_dssp ----------
T ss_pred HHHHHHHhhh
Confidence 7777766654
No 13
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=100.00 E-value=2.6e-37 Score=317.89 Aligned_cols=325 Identities=18% Similarity=0.134 Sum_probs=221.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCC-CCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEEC-
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSE-PDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKD- 137 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~-~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~- 137 (526)
++||+||||||+|+++|+.|+++|++|+|+||++.. .....|..+++++++.|+++|+.+ ... ..+.....++..
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~--~~~-~~~~~~~~~~~~~ 81 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVEL--DSI-SVPSSSMEYVDAL 81 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCG--GGT-CBCCCEEEEEETT
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCcc--ccc-cccccceEEEecC
Confidence 589999999999999999999999999999998764 334567778999999999999987 221 223334444443
Q ss_pred CeeeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEE
Q 009785 138 GNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTI 216 (526)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV 216 (526)
........+. ....+++..+.+.|++.+ +++++++++ |+++.+++++ +++...+|+ ++++|+||
T Consensus 82 ~g~~~~~~~~-------~~~~~~~~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~---v~v~~~~g~--~~~ad~vV 146 (397)
T 2vou_A 82 TGERVGSVPA-------DWRFTSYDSIYGGLYELF---GPERYHTSKCLVGLSQDSET---VQMRFSDGT--KAEANWVI 146 (397)
T ss_dssp TCCEEEEEEC-------CCCEEEHHHHHHHHHHHH---CSTTEETTCCEEEEEECSSC---EEEEETTSC--EEEESEEE
T ss_pred CCCccccccC-------cccccCHHHHHHHHHHhC---CCcEEEcCCEEEEEEecCCE---EEEEECCCC--EEECCEEE
Confidence 2221111110 112356788889998876 378888885 9999887774 445667776 47799999
Q ss_pred EeecCCccccccccCCCCCCccceeEEEEe-----ccCCCCC------CccEEEecCCCcEEEEecCCC------cEEEE
Q 009785 217 VCDGCFSNLRRSLCNPKVDVPSCFVGLVLE-----NCNLPFE------NHGHVVLADPSPILFYPISSN------EVRCL 279 (526)
Q Consensus 217 ~ADG~~S~vR~~l~~~~~~~~~~~~~~~~~-----~~~~~~~------~~~~~~~~~~~~~~~~p~~~~------~~~~~ 279 (526)
+|||.+|.+|+.++ +.. ..+.+.... ...++.. ....+++++++++.+||+.++ ...|.
T Consensus 147 ~AdG~~S~vr~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 222 (397)
T 2vou_A 147 GADGGASVVRKRLL-GIE---PTYAGYVTWRGVLQPGEVADDVWNYFNDKFTYGLLDDGHLIAYPIPGRENAESPRLNFQ 222 (397)
T ss_dssp ECCCTTCHHHHHHH-CCC---CEEEEEEEEEEEECTTSSCHHHHHHHTTEEEEEEETTEEEEEEEECCSSTTSCCEEEEE
T ss_pred ECCCcchhHHHHhc-cCC---CCccceEEEEEEeeccccChhhhhhhcCceeEEecCCCEEEEEECCCCCCccceeEEEE
Confidence 99999999999998 432 223332211 1122211 123445566677888888754 34555
Q ss_pred EEeCCCCC---CC------------------CCchHHHHHHHHhcCCCCChhhHHHHHhhhcCCCeEeccCCCCCCCCCC
Q 009785 280 VDIPGQKV---PS------------------ISNGEMANYLKTVVAPQIPREIFHSFVAAVDGGNIKTMPNRSMPAAPYP 338 (526)
Q Consensus 280 ~~~~~~~~---~~------------------~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~ 338 (526)
+..+.... .. ...+... .+.+.+...+++ +.+.+. ..+ ....++....++.+|.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~-~~~--~~~~~~~~~~~~~~~~ 297 (397)
T 2vou_A 223 WYWNVAEGPDLDELMTDVRGIRLPTSVHNNSLNPHNLR-QFHSKGESLFKP-FRDLVL-NAS--SPFVTVVADATVDRMV 297 (397)
T ss_dssp EEEECCTTHHHHHHTBCTTSCBCSSEECGGGCCHHHHH-HHHHHHTTSCHH-HHHHHH-HCS--SCEEEEEEEBCCSCSE
T ss_pred EEecCCCccchhhhccCCCCcccccccCcccCCHHHHH-HHHHHHHhhChH-HHHHHh-ccC--CcceeeeeeecCCcee
Confidence 55442210 00 0122222 222322334444 433332 221 2234555555677899
Q ss_pred CCcEEEEccCCCcCCCCCchhHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhHcc
Q 009785 339 TPGALLMGDAFNMRHPLTGGGMTVALSDIVILRNLLRHLSNLNDAPALCNYLESFYTLRKPVASTINTLAGALYQVFSA 417 (526)
Q Consensus 339 ~grv~LiGDAAh~~~P~~G~G~n~al~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~a~~~~~~~~~ 417 (526)
.|||+|+|||||.++|++|||+|+||+||..|+++|... .+.+++|++|+++|++++..++..+..+.+++..
T Consensus 298 ~grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~------~~~~~~L~~Ye~~R~~~~~~~~~~s~~~~~~~~~ 370 (397)
T 2vou_A 298 HGRVLLIGDAAVTPRPHAAAGGAKASDDARTLAEVFTKN------HDLRGSLQSWETRQLQQGHAYLNKVKKMASRLQH 370 (397)
T ss_dssp ETTEEECGGGTSBCCGGGSCHHHHHHHHHHHHHHHHHHC------SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cCcEEEEeccccccCCcchhhHHHHHHHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999841 2347899999999999999999999988888865
No 14
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=100.00 E-value=5.4e-36 Score=307.12 Aligned_cols=331 Identities=21% Similarity=0.212 Sum_probs=217.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCC-cccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEEC
Q 009785 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPD-RIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKD 137 (526)
Q Consensus 59 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~-~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 137 (526)
++|||+||||||+||++|+.|+++|++|+|+||++.... ..+|..+.++ .++++|+......+ .....+..++..
T Consensus 3 e~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~---~l~~l~~~~~~~~~-~~~~~~~~~~~~ 78 (397)
T 3oz2_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKG---ILNEADIKADRSFI-ANEVKGARIYGP 78 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETH---HHHHTTCCCCTTTE-EEEESEEEEECT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHH---HHHHcCCCchhhhh-hcccceEEEEeC
Confidence 369999999999999999999999999999999876543 3467777765 56677776443332 234455555544
Q ss_pred CeeeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEE
Q 009785 138 GNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTI 216 (526)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV 216 (526)
........... ......++.++|..|.+.|.+.+.+. +++++.++ |+++..+++.+.++.... +|+..+++||+||
T Consensus 79 ~~~~~~~~~~~-~~~~~~~~~i~R~~~~~~L~~~a~~~-G~~~~~~~~v~~~~~~~~~~~~v~~~~-~~~~~~~~a~~vI 155 (397)
T 3oz2_A 79 SEKRPIILQSE-KAGNEVGYVLERDKFDKHLAALAAKA-GADVWVKSPALGVIKENGKVAGAKIRH-NNEIVDVRAKMVI 155 (397)
T ss_dssp TCSSCEEEECS-SSSCCCEEEECHHHHHHHHHHHHHHH-TCEEESSCCEEEEEEETTEEEEEEEEE-TTEEEEEEEEEEE
T ss_pred CCceEeecccc-ccCCceeEEEEHHHHHHHHHHHHHhc-CcEEeeeeeeeeeeeccceeeeeeecc-cccceEEEEeEEE
Confidence 33222222211 12334567899999999999999887 78888885 999999999887666554 4555678999999
Q ss_pred EeecCCccccccccCCCCCCccceeEE--EEeccCC-CCCCccEEEec---CCCcEEEEecCCCcEEEEEEeCCCCCCCC
Q 009785 217 VCDGCFSNLRRSLCNPKVDVPSCFVGL--VLENCNL-PFENHGHVVLA---DPSPILFYPISSNEVRCLVDIPGQKVPSI 290 (526)
Q Consensus 217 ~ADG~~S~vR~~l~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~---~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 290 (526)
+|||.+|.+|++++............. ....... ..++...++++ ++++.+++|.+++..++.+....+.. .
T Consensus 156 gAdG~~S~vr~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~vg~~~~~~~~--~ 233 (397)
T 3oz2_A 156 AADGFESEFGRWAGLKSVILARNDIISALQYRMINVDVDPDYTDFYLGSIAPAGYIWVFPKGEGMANVGIGSSINWI--H 233 (397)
T ss_dssp ECCCTTCHHHHHHTCGGGCCCGGGEEEEEEEEEESCCCCTTEEEEECSTTSTTEEEEEEEEETTEEEEEEEEETTTS--C
T ss_pred eCCccccHHHHHcCCCcccccceeeeeeEEEEeeccccCcccceeeeeccCCCceEEEeecccceeEEEEeeccchh--h
Confidence 999999999999987543332221111 1111111 22344455544 34678899999887777665543321 1
Q ss_pred CchHHHHHHHHhcCCCCChhhHHHHHhhhcCCCeEeccCCCCCCCCCCCCcEEEEccCCCcCCCCCchhHHHHHHHHHHH
Q 009785 291 SNGEMANYLKTVVAPQIPREIFHSFVAAVDGGNIKTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVIL 370 (526)
Q Consensus 291 ~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~grv~LiGDAAh~~~P~~G~G~n~al~Da~~L 370 (526)
...+..+++.+.+.. . +. +....................++..+||+|+|||||.++|++|||+|+||+|+..|
T Consensus 234 ~~~~~~~~l~~~~~~-~-~~----l~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA~~~~P~~G~Gi~~A~~~g~~~ 307 (397)
T 3oz2_A 234 NRFELKNYLDRFIEN-H-PG----LKKGQDIQLVTGGVSVSKVKMPITMPGLMLVGDAARLIDPITGGGIANAIVSGMYA 307 (397)
T ss_dssp SHHHHHHHHHHHHHT-C-HH----HHTSEEEEEEEEEEECCCCCSCCEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHh-C-cc----ccccceeeeeeccccccCcccceeeeeEEEcccccccCCCCcchhHHHHHHHHHHH
Confidence 233445555543321 1 11 11111111111111122234567789999999999999999999999999999999
Q ss_pred HHHHhhhcCCCChHHHHHHHHHHHHHhcchhHHHHH
Q 009785 371 RNLLRHLSNLNDAPALCNYLESFYTLRKPVASTINT 406 (526)
Q Consensus 371 a~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~ 406 (526)
|+.|.+....++ ..+++|+.|+++++++......
T Consensus 308 A~~i~~~l~~~~--~~~~~L~~Ye~~~~~~~~~~~~ 341 (397)
T 3oz2_A 308 AQVTKEAIESND--YSPQMMQKYEKLIKERFERKHL 341 (397)
T ss_dssp HHHHHHHHHHTC--CSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCC--ccHHHHHHHHHHHHHHHHHHHH
Confidence 999987543222 2368999999998877654433
No 15
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=100.00 E-value=8.9e-36 Score=316.19 Aligned_cols=352 Identities=18% Similarity=0.172 Sum_probs=240.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHH-HHHHcCCcchhhcccceeeeeeEEEECC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYL-KLIELGLEDCVEQIDAQRVFGYALFKDG 138 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~-~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 138 (526)
++||+||||||+|+++|+.|+++|++|+|+||.+.+. ...|..+.+.+.. .++.+|+.+.+............+....
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~-~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~ 85 (512)
T 3e1t_A 7 VFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPR-HQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWGK 85 (512)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSC-CCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEECSS
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCC-CCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEecC
Confidence 5899999999999999999999999999999996433 3456677777664 8899999987766544333332222221
Q ss_pred ee--eeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEec-eEEEEEeeCCeEEEEEEEeCCCcEEEEEcCeE
Q 009785 139 NR--TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLT 215 (526)
Q Consensus 139 ~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~-~v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~v 215 (526)
.. ....+..........++.++|..+.+.|.+.+.+. +++++.+ +|+++..+++.+.+|++.+.+|+..+++||+|
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~-Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~V 164 (512)
T 3e1t_A 86 EPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERK-GVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFI 164 (512)
T ss_dssp CSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHT-TCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEEE
T ss_pred CccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhC-CCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCEE
Confidence 11 11222222222334567889999999999999886 7999988 59999999998888999888897677899999
Q ss_pred EEeecCCccccccccCCCCCCccceeEEEEe---ccCCCCC--CccEEEecCCCcEEEEecCCCcEEEEEEeCCCCCCCC
Q 009785 216 IVCDGCFSNLRRSLCNPKVDVPSCFVGLVLE---NCNLPFE--NHGHVVLADPSPILFYPISSNEVRCLVDIPGQKVPSI 290 (526)
Q Consensus 216 V~ADG~~S~vR~~l~~~~~~~~~~~~~~~~~---~~~~~~~--~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 290 (526)
|+|||.+|.+|++++...........++... ....+.+ ........++++++++|++++...+.+.++.+.....
T Consensus 165 I~AdG~~S~vr~~lg~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Pl~~~~~~vg~~~~~~~~~~~ 244 (512)
T 3e1t_A 165 VDASGNRTRVSQAVGERVYSRFFQNVALYGYFENGKRLPAPRQGNILSAAFQDGWFWYIPLSDTLTSVGAVVSREAAEAI 244 (512)
T ss_dssp EECCCTTCSSGGGTCCEEECSTTCEEEEEEEEESCCCCSTTCTTSEEEEEETTEEEEEEECSSSEEEEEEEEEHHHHTTT
T ss_pred EECCCcchHHHHHcCCCccCchhcceEEEEEecCCccCCCCCcCceEEEEeCCceEEEEEeCCCeEEEEEEecHHHhhhh
Confidence 9999999999999965322222222222211 1122222 2334455677899999999987777776653211111
Q ss_pred CchHHHHHHHHhcCCCCChhhHHHHHhhhcC-----CCeEeccCCCCCCCCCCCCcEEEEccCCCcCCCCCchhHHHHHH
Q 009785 291 SNGEMANYLKTVVAPQIPREIFHSFVAAVDG-----GNIKTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALS 365 (526)
Q Consensus 291 ~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~-----~~i~~~~~~~~~~~~~~~grv~LiGDAAh~~~P~~G~G~n~al~ 365 (526)
.. ...+.+++.+. ..+.+.+.+...... ..+...+.......+|..+||+|+|||||.++|++|||+|+|++
T Consensus 245 ~~-~~~~~~~~~l~--~~p~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~vvlvGDAAh~~~P~~GqG~~~Al~ 321 (512)
T 3e1t_A 245 KD-GHEAALLRYID--RCPIIKEYLAPATRVTTGDYGEIRIRKDYSYCNTSFWKNGMALVGDAACFVDPVFSSGVHLATY 321 (512)
T ss_dssp SS-CHHHHHHHHHH--TSHHHHHHHTTCEECCSSTTSSCEEEESCCEEESCSBCSSEEECGGGTEECCSTTCCHHHHHHH
T ss_pred cC-CHHHHHHHHHH--hCchHHHHHhcCccccccccccceeeccccccccccccCCEEEEechhhcCCCccccCHHHHHH
Confidence 10 11222222221 112333322221111 12222222222456778899999999999999999999999999
Q ss_pred HHHHHHHHHhhhcCCCChHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhHccC
Q 009785 366 DIVILRNLLRHLSNLNDAPALCNYLESFYTLRKPVASTINTLAGALYQVFSAS 418 (526)
Q Consensus 366 Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~a~~~~~~~~~~ 418 (526)
||..|++.|..... ...+.+.+|+.|+++|++....+..+...+|.+....
T Consensus 322 dA~~La~~L~~~l~--~~~~~~~aL~~Ye~~~~~~~~~~~~~~~~~y~~~~r~ 372 (512)
T 3e1t_A 322 SALLVARAINTCLA--GEMSEQRCFEEFERRYRREYGNFYQFLVAFYDMNQDT 372 (512)
T ss_dssp HHHHHHHHHHHHTT--TCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCT
T ss_pred HHHHHHHHHHHHHc--CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Confidence 99999999987643 2234578999999999999999999888888876544
No 16
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=100.00 E-value=7.4e-36 Score=307.16 Aligned_cols=336 Identities=14% Similarity=0.173 Sum_probs=219.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCccccee--eCc-chHHHHHHcCCcchhhcccceeeeeeEEE
Q 009785 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGEL--LQP-GGYLKLIELGLEDCVEQIDAQRVFGYALF 135 (526)
Q Consensus 59 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~--l~~-~~~~~l~~lGl~~~l~~~~~~~~~~~~~~ 135 (526)
+++||+||||||+|+++|+.|+++|++|+|+||++....+..|.. +.+ ++.+.|+++|+++.+....... .. .++
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~-~~-~~~ 102 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPM-GV-NIA 102 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCC-CE-EEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhccc-ce-EEE
Confidence 468999999999999999999999999999999976555444444 333 5789999999998876543222 12 333
Q ss_pred ECCeeeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEec-eEEEEEeeCCeEEEEEEEeCCCcEEEEEcCe
Q 009785 136 KDGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPL 214 (526)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~-~v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~ 214 (526)
............... .......++|..+.+.|.+.+.+ +.++++ +|+++.++++. ++++..+|+ +++||+
T Consensus 103 ~~~g~~~~~~~~~~~-~~~~~~~i~r~~l~~~L~~~~~~---~~i~~~~~v~~i~~~~~~---v~v~~~~g~--~~~ad~ 173 (398)
T 2xdo_A 103 DEKGNILSTKNVKPE-NRFDNPEINRNDLRAILLNSLEN---DTVIWDRKLVMLEPGKKK---WTLTFENKP--SETADL 173 (398)
T ss_dssp CSSSEEEEECCCGGG-TTSSCCEECHHHHHHHHHHTSCT---TSEEESCCEEEEEECSSS---EEEEETTSC--CEEESE
T ss_pred CCCCCchhhcccccc-CCCCCceECHHHHHHHHHhhcCC---CEEEECCEEEEEEECCCE---EEEEECCCc--EEecCE
Confidence 322222222100000 01122357899999999987643 456667 59999887764 455667776 467999
Q ss_pred EEEeecCCccccccccCCCCCCccceeEEEEeccCCC-----C-------CCccEEEecCCCcEEEEecCCCcEEEEEEe
Q 009785 215 TIVCDGCFSNLRRSLCNPKVDVPSCFVGLVLENCNLP-----F-------ENHGHVVLADPSPILFYPISSNEVRCLVDI 282 (526)
Q Consensus 215 vV~ADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~-----~-------~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 282 (526)
||+|||.+|.+|++++...+ .+.+.......++ . +....++++++..++.+|.+++..++.+.+
T Consensus 174 vV~AdG~~S~vR~~l~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~ 249 (398)
T 2xdo_A 174 VILANGGMSKVRKFVTDTEV----EETGTFNIQADIHQPEINCPGFFQLCNGNRLMASHQGNLLFANPNNNGALHFGISF 249 (398)
T ss_dssp EEECSCTTCSCCTTTCCCCC----EEEEEEEEEEEESSHHHHSHHHHHHHTTSEEEEEETTEEEEEEEEETTEEEEEEEE
T ss_pred EEECCCcchhHHhhccCCCc----eEcceEEEEEEeCchhccCchhHhhcCCceEEEecCCCeEEEEeCCCCcEEEEEEE
Confidence 99999999999999864322 2222221111111 0 111223445656677788888877777665
Q ss_pred CCC-CC------CCCCchHHHHHHHHhcCCCCChhhHHHHHhhhcCCCeEeccCCCCC-CCCCCC-C--cEEEEccCCCc
Q 009785 283 PGQ-KV------PSISNGEMANYLKTVVAPQIPREIFHSFVAAVDGGNIKTMPNRSMP-AAPYPT-P--GALLMGDAFNM 351 (526)
Q Consensus 283 ~~~-~~------~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~-~~~~~~-g--rv~LiGDAAh~ 351 (526)
... .. ...+.++..+.+.+.+. .+.+.+.+.+.. ...+..++....+ ..+|.. + ||+|+|||||.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~rv~LiGDAAh~ 325 (398)
T 2xdo_A 250 KTPDEWKNQTQVDFQNRNSVVDFLLKEFS-DWDERYKELIHT---TLSFVGLATRIFPLEKPWKSKRPLPITMIGDAAHL 325 (398)
T ss_dssp ECCTTC---CCSCTTCHHHHHHHHHHHTT-TSCHHHHHHHHH---CSCCEEEEEEECCCCSCCCSCCSSCEEECTHHHHC
T ss_pred ecCcccccccccCcCCHHHHHHHHHHHHc-CCChHHHHHHhC---cccceeeeeEeccCCCCcccCCCccEEEEeehhcc
Confidence 322 11 11234455566665443 345555544433 1233333333333 236654 5 99999999999
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHHHhcchhHHHHHHHHHHHH-hHcc
Q 009785 352 RHPLTGGGMTVALSDIVILRNLLRHLSNLNDAPALCNYLESFYTLRKPVASTINTLAGALYQ-VFSA 417 (526)
Q Consensus 352 ~~P~~G~G~n~al~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~a~~~~~-~~~~ 417 (526)
++|++|||+|+||+||.+|+++|.... .+ ..+++|++|+++|++++..++..+..... +|..
T Consensus 326 ~~P~~GqG~n~ai~Da~~La~~L~~~~--~~--~~~~~L~~Y~~~r~~~~~~~~~~s~~~~~~~~~~ 388 (398)
T 2xdo_A 326 MPPFAGQGVNSGLVDALILSDNLADGK--FN--SIEEAVKNYEQQMFIYGKEAQEESTQNEIEMFKP 388 (398)
T ss_dssp CCCTTSCSHHHHHHHHHHHHHHHHSCC--SS--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHST
T ss_pred CCCccCccHHHHHHHHHHHHHHHHhcc--Cc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999998641 11 15789999999999999999888876654 4443
No 17
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=100.00 E-value=4.8e-36 Score=313.69 Aligned_cols=340 Identities=17% Similarity=0.206 Sum_probs=228.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCC--CCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEEC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSE--PDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKD 137 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~--~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 137 (526)
++||+||||||+|+++|+.|+++|++|+|+||++.+ ....+|..+ +.+.++++|+.+...........+..++..
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l---~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~ 82 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAV---SKAHFDKLGMPYPKGEELENKINGIKLYSP 82 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEE---EHHHHHHTTCCCCCGGGEEEEEEEEEEECT
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccc---cHHHHHHhcCCCCchHHHHhhhcceEEECC
Confidence 589999999999999999999999999999998653 223355545 568889999876443322223344444433
Q ss_pred CeeeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeC-CCcEEEEEcCeE
Q 009785 138 GNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTK-AGEELTAYAPLT 215 (526)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~-~G~~~~i~a~~v 215 (526)
.......+ ...++.++|..|.+.|.+.+.+. +++++.++ |+++..+++.+.+|++.+. +|+..+++||+|
T Consensus 83 ~~~~~~~~-------~~~~~~i~r~~l~~~L~~~a~~~-gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~V 154 (453)
T 3atr_A 83 DMQTVWTV-------NGEGFELNAPLYNQRVLKEAQDR-GVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVV 154 (453)
T ss_dssp TSSCEEEE-------EEEEEEECHHHHHHHHHHHHHHT-TCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEE
T ss_pred CCceEEeE-------CCCcEEEcHHHHHHHHHHHHHHc-CCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEE
Confidence 22111111 12356789999999999999885 79999985 9999988888888888765 787667899999
Q ss_pred EEeecCCccccccccCCCCC----Cc-cceeEE---EEeccCCCCCCccEEEec----CCCcEEEEecCCCcEEEEEEeC
Q 009785 216 IVCDGCFSNLRRSLCNPKVD----VP-SCFVGL---VLENCNLPFENHGHVVLA----DPSPILFYPISSNEVRCLVDIP 283 (526)
Q Consensus 216 V~ADG~~S~vR~~l~~~~~~----~~-~~~~~~---~~~~~~~~~~~~~~~~~~----~~~~~~~~p~~~~~~~~~~~~~ 283 (526)
|+|||.+|.+|+.++...+. .. ....++ +........+....++++ +++++|++|.+++..++.+.++
T Consensus 155 V~AdG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~~ 234 (453)
T 3atr_A 155 VEATGYSRSFRSKLPPELPITEDLDDKDADVAYREVLLTKEDIEDHDYLRIFIDQETSPGGYWWYFPKGKNKVNVGLGIQ 234 (453)
T ss_dssp EECCGGGCTTGGGSCTTSGGGCCCCGGGEEEEEEEEEEESSCCTTTTEEEEECCTTTSTTSCEEEEEEETTEEEEEEEEE
T ss_pred EECcCCchhhHHhcCCCCCcccCCCcccceeeeEEEEecCCCccCCCeEEEEECCCCCCCcEEEEEECCCCeEEEEEEec
Confidence 99999999999999865321 11 111222 111112222334445654 4678999999998777777665
Q ss_pred CCCCCCCCchHHHHHHHHhcCCCCChhhHHHHHhhhcCCCeEeccCCCCCCCCCCCCcEEEEccCCCcCCCCCchhHHHH
Q 009785 284 GQKVPSISNGEMANYLKTVVAPQIPREIFHSFVAAVDGGNIKTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVA 363 (526)
Q Consensus 284 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~grv~LiGDAAh~~~P~~G~G~n~a 363 (526)
....+....+.+.+++.+. .+.+... ...+. .-...+. ..+..+|..+|++|+|||||.++|++|||+|+|
T Consensus 235 ~~~~~~~~~~~~~~~l~~~-~~~~~~~------~~~~~-~~~~~p~-~~~~~~~~~~~v~lvGDAAh~~~P~~G~G~~~A 305 (453)
T 3atr_A 235 GGMGYPSIHEYYKKYLDKY-APDVDKS------KLLVK-GGALVPT-RRPLYTMAWNGIIVIGDSGFTVNPVHGGGKGSA 305 (453)
T ss_dssp SSSCCCCHHHHHHHHHHHH-CTTEEEE------EEEEE-EEEEEEC-SSCCSCSEETTEEECGGGGTCSCTTTCCCHHHH
T ss_pred CCCCCCCHHHHHHHHHHhh-hhhcCCC------eEEec-cceeccC-CCCCCceecCCEEEEeCcccCCCCCccccHHHH
Confidence 3321111223334444332 2222110 00000 0011222 345677888999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcCCCChHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhHccCCch
Q 009785 364 LSDIVILRNLLRHLSNLNDAPALCNYLESFYTLRKPVASTINTLAGALYQVFSASPDE 421 (526)
Q Consensus 364 l~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~a~~~~~~~~~~~~~ 421 (526)
|+||..|+++|......++ ..+++|+.|+++|+++....+..+..+.+++..-.++
T Consensus 306 i~da~~la~~l~~~l~~~~--~~~~~L~~Y~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 361 (453)
T 3atr_A 306 MISGYCAAKAILSAFETGD--FSASGLWDMNICYVNEYGAKQASLDIFRRFLQKLSND 361 (453)
T ss_dssp HHHHHHHHHHHHHHHHHTC--CSTTTTTHHHHHHHHHTHHHHHHHHHHHHHHTTCCHH
T ss_pred HHHHHHHHHHHHHHHHcCC--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH
Confidence 9999999999986431111 1246899999999999999988888777776543344
No 18
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=100.00 E-value=1.3e-36 Score=310.64 Aligned_cols=322 Identities=19% Similarity=0.154 Sum_probs=221.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCe
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 139 (526)
.+||+||||||+|+++|+.|+++|++|+|+||++......++..+.+++++.|+++|+.+.+.... .......++..+.
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~-~~~~~~~~~~~g~ 89 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGS-HTPPTYETWMHNK 89 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTC-BCCSCEEEEETTE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhC-CCccceEEEeCCc
Confidence 589999999999999999999999999999999877666788899999999999999988776643 2334455555432
Q ss_pred eeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEe
Q 009785 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVC 218 (526)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~A 218 (526)
. ...++.. ....+.++|..+.+.|.+.+.+. ++++++++ |++++. ++ ++...+|+ +++||+||+|
T Consensus 90 ~-~~~~~~~----~~~~~~~~r~~l~~~L~~~~~~~-gv~i~~~~~v~~i~~-~~-----~v~~~~g~--~~~ad~vV~A 155 (379)
T 3alj_A 90 S-VSKETFN----GLPWRIMTRSHLHDALVNRARAL-GVDISVNSEAVAADP-VG-----RLTLQTGE--VLEADLIVGA 155 (379)
T ss_dssp E-EEEECGG----GCCEEEEEHHHHHHHHHHHHHHT-TCEEESSCCEEEEET-TT-----EEEETTSC--EEECSEEEEC
T ss_pred e-eeeccCC----CCceEEECHHHHHHHHHHHHHhc-CCEEEeCCEEEEEEe-CC-----EEEECCCC--EEEcCEEEEC
Confidence 2 1122211 12357889999999999999887 89999885 999987 33 23356676 4779999999
Q ss_pred ecCCccccccccCCCCCCccceeEEEEe-cc-----CCCCCC-ccEE--EecCCCcEEEEecCCCcEEEEEEeCCCCCCC
Q 009785 219 DGCFSNLRRSLCNPKVDVPSCFVGLVLE-NC-----NLPFEN-HGHV--VLADPSPILFYPISSNEVRCLVDIPGQKVPS 289 (526)
Q Consensus 219 DG~~S~vR~~l~~~~~~~~~~~~~~~~~-~~-----~~~~~~-~~~~--~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 289 (526)
||.+|.+|+.++.........+..+... .. ....+. .... +++++++++++|++++..+|.+.++... +.
T Consensus 156 dG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~ 234 (379)
T 3alj_A 156 DGVGSKVRDSIGFKQDRWVSKDGLIRLIVPRMKKELGHGEWDNTIDMWNFWPRVQRILYSPCNENELYLGLMAPAAD-PR 234 (379)
T ss_dssp CCTTCHHHHHHCCCEEEEEEEEEEEEEEEECCHHHHCSSCTTSEEEEECCSSSCCEEEEEECSSSEEEEEEEECTTC-TT
T ss_pred CCccHHHHHHhcCCCCcCcCCcEEEEEEechhhccCCcCCcccccccceEECCCCEEEEEECCCCcEEEEEEecCCC-CC
Confidence 9999999999986321111111111111 11 111122 2222 4677788999999999888877765321 11
Q ss_pred CCchHHHHHHHHhcCCCCChhhHHHHHhhhcCCCeEeccCCC-CCCCCCCCCcEEEEccCCCcCCCCCchhHHHHHHHHH
Q 009785 290 ISNGEMANYLKTVVAPQIPREIFHSFVAAVDGGNIKTMPNRS-MPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIV 368 (526)
Q Consensus 290 ~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~-~~~~~~~~grv~LiGDAAh~~~P~~G~G~n~al~Da~ 368 (526)
++++.+.+..+.. .++ .+.+.+. ..+...+..++... .+..+|..|||+|+|||||.++|++|||+|+||+||.
T Consensus 235 --~~~l~~~~~~~~~-~~~-~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~rv~lvGDAAh~~~P~~GqG~~~ai~da~ 309 (379)
T 3alj_A 235 --GSSVPIDLEVWVE-MFP-FLEPCLI-EAAKLKTARYDKYETTKLDSWTRGKVALVGDAAHAMCPALAQGAGCAMVNAF 309 (379)
T ss_dssp --TTCSSCCHHHHHH-HCG-GGHHHHH-HHHTCTTCCEEEEEEEEESCSEETTEEECTHHHHCCCGGGSCHHHHHHHHHH
T ss_pred --HHHHHHHHhcCCc-hhc-cHHHHHh-hCCccceEEecccccCCCCCcccCcEEEEEcccCCCCcchhhhHHHHHHHHH
Confidence 1222222222110 011 1112221 11112233344333 2357788899999999999999999999999999999
Q ss_pred HHHHHHhhhcCCCChHHHHHHHHHHHHHhcchhHHHHHHH
Q 009785 369 ILRNLLRHLSNLNDAPALCNYLESFYTLRKPVASTINTLA 408 (526)
Q Consensus 369 ~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~a 408 (526)
+|+++|... .+.+.+|+.|+++|++++..++..+
T Consensus 310 ~La~~L~~~------~~~~~~l~~Y~~~r~~~~~~~~~~s 343 (379)
T 3alj_A 310 SLSQDLEEG------SSVEDALVAWETRIRPITDRCQALS 343 (379)
T ss_dssp HHHHHTTSS------SCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccc------cCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999852 1347899999999999999988776
No 19
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=100.00 E-value=5.7e-36 Score=320.60 Aligned_cols=360 Identities=16% Similarity=0.168 Sum_probs=240.0
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEE
Q 009785 56 ECPFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALF 135 (526)
Q Consensus 56 ~~~~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~ 135 (526)
.+++++||+||||||+|+++|+.|+++|++|+|+|+.+.+. ...|..+.+.+.+.++.+|+++.+.........+..+.
T Consensus 19 ~~M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~-~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~ 97 (591)
T 3i3l_A 19 SHMTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPR-YRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFL 97 (591)
T ss_dssp -CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSC-CCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEE
T ss_pred CcCCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCC-CceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEE
Confidence 34457999999999999999999999999999999986443 34588899999999999999987776544433333332
Q ss_pred ECCee--eeecCCCcCC--CCCcccceeechHHHHHHHHHHHcCCCeEEEec-eEEEEEeeCCeEEEEEEEeCCCcEEEE
Q 009785 136 KDGNR--TQISYPLEKF--HSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTA 210 (526)
Q Consensus 136 ~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~-~v~~l~~~~~~v~gv~v~~~~G~~~~i 210 (526)
..... ....+..... ...+.++.+++..+.+.|.+.+.+. +++++++ +|+++..+++.+.+|++.+ +|+..++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~-Gv~i~~g~~V~~v~~~~g~~~~V~~~~-~G~~~~i 175 (591)
T 3i3l_A 98 WGQDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSR-GITVHEETPVTDVDLSDPDRVVLTVRR-GGESVTV 175 (591)
T ss_dssp CSSSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHT-TCEEETTCCEEEEECCSTTCEEEEEEE-TTEEEEE
T ss_pred ecCCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhC-CCEEEeCCEEEEEEEcCCCEEEEEEec-CCceEEE
Confidence 22211 1111211111 0123466789999999999999886 8999988 5999987655555666654 6765678
Q ss_pred EcCeEEEeecCCccccccccCCCCCCccceeEEEE--ec-cCCC--CCCccEEEecCCCcEEEEecCCCcEEEEEEeCCC
Q 009785 211 YAPLTIVCDGCFSNLRRSLCNPKVDVPSCFVGLVL--EN-CNLP--FENHGHVVLADPSPILFYPISSNEVRCLVDIPGQ 285 (526)
Q Consensus 211 ~a~~vV~ADG~~S~vR~~l~~~~~~~~~~~~~~~~--~~-~~~~--~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 285 (526)
+||+||+|||.+|.+|+.++............+.. .. ...+ ..........+.++++++|+.++...+.+..+.+
T Consensus 176 ~AdlVV~AdG~~S~lr~~lg~~~~~~~~~~~av~~~~~~~~~~~~~~~~~~~~~~~~~G~~w~iPl~~~~~sv~~~~~~~ 255 (591)
T 3i3l_A 176 ESDFVIDAGGSGGPISRKLGVRQYDEFYRNFAVWSYFKLKDPFEGDLKGTTYSITFEDGWVWMIPIKDDLYSVGLVVDRS 255 (591)
T ss_dssp EESEEEECCGGGCHHHHHHTCEEEEEEEEEEEEEEEEECCCSCCSTTTTCEEEEEETTEEEEEEECSSSEEEEEEEEEGG
T ss_pred EcCEEEECCCCcchhHHHcCCCCCCccccceEEEEEEecCccccCCCCCceEEEEcCCcEEEEEECCCCeEEEEEEcCHH
Confidence 99999999999999999997653321111112211 11 1222 2233445556778999999998877776665433
Q ss_pred CCCCCCchHHHHHHHHhcCCCCChhhHHHHHhhhcCCCeEeccCCCCCCCCCCCCcEEEEccCCCcCCCCCchhHHHHHH
Q 009785 286 KVPSISNGEMANYLKTVVAPQIPREIFHSFVAAVDGGNIKTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALS 365 (526)
Q Consensus 286 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~grv~LiGDAAh~~~P~~G~G~n~al~ 365 (526)
...........+++.+... .. +.+.+.+...........++.......+|..+|++++|||||.++|+.|||+|+|++
T Consensus 256 ~~~~l~~~~~~~~~~~l~~-~~-p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rvvLIGDAAh~~~Pl~GqGinlAl~ 333 (591)
T 3i3l_A 256 KSAEVREQGADAFYSSTLA-KC-AKAMDILGGAEQVDEVRIVQDWSYDTEVFSADRFFLCGDAACFTDPLFSQGVHLASQ 333 (591)
T ss_dssp GHHHHHHHCHHHHHHHHHT-TC-HHHHHHHTTCEECSCCEEEEEEEEEESCSEETTEEECGGGTCBCCGGGCCHHHHHHH
T ss_pred HHhhhccCCHHHHHHHHHH-hC-HHHHHHHhcCccccCceEecccccchhhcccCCEEEEccccccCCCcccccHHHHHH
Confidence 2111111112233333222 12 233333322221222222222233456788899999999999999999999999999
Q ss_pred HHHHHHHHHhhhcCCCChHHHHHHHHHHHHHhcchhHHHHHHHHHHH--HhHccCCchH
Q 009785 366 DIVILRNLLRHLSNLNDAPALCNYLESFYTLRKPVASTINTLAGALY--QVFSASPDEA 422 (526)
Q Consensus 366 Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~a~~~~--~~~~~~~~~~ 422 (526)
||..|+++|..... ++...+.+++.|+++|++....+..+....| ......+.+.
T Consensus 334 dA~~LA~~L~~~l~--~~~~~~~al~~Y~~~~~~~~~~i~~~~~~~Y~~~~~~r~ds~F 390 (591)
T 3i3l_A 334 SAVSAAAAIDRITR--HGDEKDAVHAWYNRTYREAYEQYHQFLASFYTFASFTEPDSEF 390 (591)
T ss_dssp HHHHHHHHHHHHHH--CGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCHH
T ss_pred HHHHHHHHHHHHHh--CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCChHH
Confidence 99999999986532 2344578999999999999999999999888 4444333333
No 20
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=100.00 E-value=6.4e-34 Score=294.80 Aligned_cols=337 Identities=18% Similarity=0.151 Sum_probs=232.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCe
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 139 (526)
++||+|||||++|+++|+.|+++|++|+|+||++.+. ...|..+.+++++.++++|+.+.+.........+..+.....
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~-~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 83 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPR-FVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVRGKE 83 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSC-CCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEETTE
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCC-CcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEeCCe
Confidence 5899999999999999999999999999999996443 367888999999999999999888776655555566555544
Q ss_pred eeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEec-eEEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEe
Q 009785 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVC 218 (526)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~-~v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~A 218 (526)
.....+..........++.++|..+.+.|.+.+.+. +++++++ +|+++..+++.+. +.+.+.+|+..+++||+||+|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~-gv~i~~~~~v~~i~~~~~~~~-v~v~~~~g~~~~~~a~~vV~A 161 (421)
T 3nix_A 84 IADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQ-GVDVEYEVGVTDIKFFGTDSV-TTIEDINGNKREIEARFIIDA 161 (421)
T ss_dssp EEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHH-TCEEECSEEEEEEEEETTEEE-EEEEETTSCEEEEEEEEEEEC
T ss_pred eEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhC-CCEEEcCCEEEEEEEeCCEEE-EEEEcCCCCEEEEEcCEEEEC
Confidence 444444322222234567889999999999999887 7999988 4999998877654 677788898777899999999
Q ss_pred ecCCccccccccCCCCCCccceeEEEEe-ccCCCC----CCccEEEec---CCCcEEEEecCCCcEEEEEEeCCCCCCCC
Q 009785 219 DGCFSNLRRSLCNPKVDVPSCFVGLVLE-NCNLPF----ENHGHVVLA---DPSPILFYPISSNEVRCLVDIPGQKVPSI 290 (526)
Q Consensus 219 DG~~S~vR~~l~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~---~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 290 (526)
||.+|.+|+.++.+.+........+... ....+. .+...+++. +.+++|++|.+++...+.+..+.+.....
T Consensus 162 ~G~~s~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~~~~~~~~~ 241 (421)
T 3nix_A 162 SGYGRVIPRMFGLDKPSGFESRRTLFTHIKDVKRPVAAEMEGNRITAVVHKPKVWIWVIPFSNGNTSVGFVGEPSYFDEY 241 (421)
T ss_dssp CGGGCHHHHHTTCEECCSSCCCEEEEEEEECTTCCC----CCSEEEEEEEETTEEEEEEECTTSEEEEEEEECHHHHTTS
T ss_pred CCCchhhHHhcCCCCCCcCCCcEEEEEEECCCcCCCccCCCCeEEEEEeCCCCEEEEEEEECCCCEEEEEEecHHHhhhc
Confidence 9999999999987544332222222221 111111 122233332 55688999999988777776653211111
Q ss_pred CchHHHHHHHHhcCCCCChhhHHHHHhhhcCCCeEeccCCCCCCCCCCCCcEEEEccCCCcCCCCCchhHHHHHHHHHHH
Q 009785 291 SNGEMANYLKTVVAPQIPREIFHSFVAAVDGGNIKTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVIL 370 (526)
Q Consensus 291 ~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~grv~LiGDAAh~~~P~~G~G~n~al~Da~~L 370 (526)
..+..+.+++.+. .. +.+.+.+........+..++.......++..+|++++|||||.++|++|+|+|.|++||..|
T Consensus 242 -~~~~~~~l~~~~~-~~-p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAa~~~~P~~G~G~~~A~~~a~~l 318 (421)
T 3nix_A 242 -TGTPEERMRAMIA-NE-GHIAERFKSEEFLFEPRTIEGYAISASKLYGDGFVLTGNATEFLDPIFSSGATFAMESGSKG 318 (421)
T ss_dssp -CSCHHHHHHHHHH-TC-TTTHHHHTTCCBSSCCEEEECCCBEESCSEETTEEECGGGTCBCCSTTCCHHHHHHHHHHHH
T ss_pred -CCCHHHHHHHHHH-hC-cHHHHHHhcCccccCceeecccceeeeeeccCCEEEecccccccCCcccccHHHHHHHHHHH
Confidence 1122233333221 11 22333332222223445555555556778889999999999999999999999999999999
Q ss_pred HHHHhhhcCCCChHHHHHHHHHHHHHhcchhHHHHH
Q 009785 371 RNLLRHLSNLNDAPALCNYLESFYTLRKPVASTINT 406 (526)
Q Consensus 371 a~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~ 406 (526)
++.|.......+ .+.++.|+++++........
T Consensus 319 a~~l~~~~~~~~----~~~~~~y~~~~~~~~~~~~~ 350 (421)
T 3nix_A 319 GKLAVQFLKGEE----VNWEKDFVEHMMQGIDTFRS 350 (421)
T ss_dssp HHHHHHHHTTCC----CCHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCc----hhHHHHHHHHHHHHHHHHHH
Confidence 999987643222 13667788888765554433
No 21
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=100.00 E-value=6.4e-34 Score=292.25 Aligned_cols=343 Identities=19% Similarity=0.194 Sum_probs=230.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCC-cccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPD-RIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDG 138 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~-~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 138 (526)
++||+||||||+|+++|+.|+++|++|+|+||++.... ..++..+. .+.++++|+++.... ......+..++...
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~---~~~~~~lg~~~~~~~-~~~~~~~~~~~~~~ 79 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLS---KGILNEADIKADRSF-IANEVKGARIYGPS 79 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEE---THHHHHTTCCCCTTT-EEEEESEEEEECTT
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccC---HHHHHHcCCCCChHH-hhhhcceEEEEcCC
Confidence 58999999999999999999999999999999975433 34444443 367788898655322 22344555555433
Q ss_pred eeeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEE
Q 009785 139 NRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIV 217 (526)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~ 217 (526)
......++.... ....++.+++..|.+.|.+.+.+. +++++.++ |+++..+++.+.+|++... ++..+++||+||+
T Consensus 80 ~~~~~~~~~~~~-~~~~~~~~~~~~l~~~L~~~~~~~-gv~i~~~~~v~~i~~~~~~v~gv~~~~~-~~~~~~~a~~vV~ 156 (397)
T 3cgv_A 80 EKRPIILQSEKA-GNEVGYVLERDKFDKHLAALAAKA-GADVWVKSPALGVIKENGKVAGAKIRHN-NEIVDVRAKMVIA 156 (397)
T ss_dssp CSSCEEEC------CCCEEEECHHHHHHHHHHHHHHH-TCEEESSCCEEEEEEETTEEEEEEEEET-TEEEEEEEEEEEE
T ss_pred CCEEEEEecccc-CCceeEEEeHHHHHHHHHHHHHhC-CCEEEECCEEEEEEEeCCEEEEEEEEEC-CeEEEEEcCEEEE
Confidence 222122221111 134577899999999999999886 79998884 9999988888877877653 3335688999999
Q ss_pred eecCCccccccccCCC-CCCcc-ceeEEE--EeccCCCCCCccEEEec---CCCcEEEEecCCCcEEEEEEeCCCCCCCC
Q 009785 218 CDGCFSNLRRSLCNPK-VDVPS-CFVGLV--LENCNLPFENHGHVVLA---DPSPILFYPISSNEVRCLVDIPGQKVPSI 290 (526)
Q Consensus 218 ADG~~S~vR~~l~~~~-~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~---~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 290 (526)
|||.+|.+|+.++.+. ..... ...++. ......+ ++...++++ +.+++|++|.+++..++.+....+.. .
T Consensus 157 A~G~~s~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~~~~~~--~ 233 (397)
T 3cgv_A 157 ADGFESEFGRWAGLKSVILARNDIISALQYRMINVDVD-PDYTDFYLGSIAPAGYIWVFPKGEGMANVGIGSSINWI--H 233 (397)
T ss_dssp CCCTTCHHHHHHTCCTTCCCGGGEEEEEEEEEESCCCC-TTEEEEECSTTSTTEEEEEEEEETTEEEEEEEEETTTC--S
T ss_pred CCCcchHhHHhcCCCccCCChhheeEEEEEEeccCCCC-CCcEEEEeCCcCCCceEEEEECCCCeEEEEEEeccccc--c
Confidence 9999999999998765 32221 222222 2222222 344455543 55789999999988777776654321 1
Q ss_pred CchHHHHHHHHhcCCCCChhhHHHHHhhhcCCCeEeccCCCCCCCCCCCCcEEEEccCCCcCCCCCchhHHHHHHHHHHH
Q 009785 291 SNGEMANYLKTVVAPQIPREIFHSFVAAVDGGNIKTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVIL 370 (526)
Q Consensus 291 ~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~grv~LiGDAAh~~~P~~G~G~n~al~Da~~L 370 (526)
...+..+.+++.+... +.+. ...........+|.. .+..+|..+|++++|||||.++|++|||+|.|++||..|
T Consensus 234 ~~~~~~~~l~~~~~~~--~~~~---~~~~~~~~~~~~p~~-~~~~~~~~~~v~liGDAa~~~~P~~G~G~~~a~~~a~~l 307 (397)
T 3cgv_A 234 NRFELKNYLDRFIENH--PGLK---KGQDIQLVTGGVSVS-KVKMPITMPGLMLVGDAARLIDPITGGGIANAIVSGMYA 307 (397)
T ss_dssp CHHHHHHHHHHHHHTC--HHHH---TSEEEEEEEEEEECC-CCCSCCEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhC--cCCC---CCeEEeeeeeeeecC-CCccceeeCCEEEEEccccCCCCCCCCCHHHHHHHHHHH
Confidence 2234444555443211 1110 000001112234443 246678889999999999999999999999999999999
Q ss_pred HHHHhhhcCCCChHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhHccCCc
Q 009785 371 RNLLRHLSNLNDAPALCNYLESFYTLRKPVASTINTLAGALYQVFSASPD 420 (526)
Q Consensus 371 a~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~a~~~~~~~~~~~~ 420 (526)
++.|...... ++..+.+|+.|+++|++.....+..+..+.+++...++
T Consensus 308 a~~l~~~~~~--~~~~~~~l~~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (397)
T 3cgv_A 308 AQVTKEAIES--NDYSPQMMQKYEKLIKERFERKHLRNWVAKEKLAMLSD 355 (397)
T ss_dssp HHHHHHHHHH--TCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCH
T ss_pred HHHHHHHHHc--CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH
Confidence 9999865311 11235789999999999988888888887777755433
No 22
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=100.00 E-value=2.6e-31 Score=282.79 Aligned_cols=334 Identities=16% Similarity=0.131 Sum_probs=218.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHh------------CCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcch--hhccc
Q 009785 60 DADVIVVGAGVAGAALANTLAK------------DGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDC--VEQID 125 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~------------~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~--l~~~~ 125 (526)
.+||+||||||+|+++|+.|++ .|++|+|||+...+. ...|+.+.|++++.|+++|+.+. +....
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~~~-~g~g~~~~p~~~~~l~~lGi~e~~~~~~~~ 85 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDVAT-IGVGEGTWPSMRSTLSKIGIDENDFIRQCD 85 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSCCC-CCSCEECCTHHHHHHHHHTCCHHHHHHHTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCCCC-cceeeechHhHHHHHHHcCCCHHHHHHHcC
Confidence 5799999999999999999999 999999999975433 34588999999999999999986 55544
Q ss_pred ceeeeeeEEEE--C------CeeeeecCC---------C-----------------------------------cCC-CC
Q 009785 126 AQRVFGYALFK--D------GNRTQISYP---------L-----------------------------------EKF-HS 152 (526)
Q Consensus 126 ~~~~~~~~~~~--~------~~~~~~~~~---------~-----------------------------------~~~-~~ 152 (526)
.....+..+.. . +......+. . ..+ ..
T Consensus 86 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~v~~q~~~~~~~~~~~~~~~~~~~~~ 165 (526)
T 2pyx_A 86 ASFKQGSRFINWCKDPQSNVADSYLHPFSLPHGHQELDLCPYWLPHAEQVSFAEAVCSQQVLTQLGLAPKSIVTAQYHFQ 165 (526)
T ss_dssp CEEECEEEEESCSSCCBTTBCCEEEEESSCCTTTTTCCCHHHHGGGTTTSCHHHHHCSHHHHHHTTBCSSCTTSCTTCCS
T ss_pred CEEECCCcccCCCccccCCCCCceecCCCCCCCCCCCChhHHHHhhhhccCchhhcccccchhhhccchhhhhccccCCC
Confidence 33333333221 1 000000000 0 000 11
Q ss_pred CcccceeechHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEeecCCccc-cccccC
Q 009785 153 DVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFSNL-RRSLCN 231 (526)
Q Consensus 153 ~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~ADG~~S~v-R~~l~~ 231 (526)
...++.++|..+.+.|++.+.+..+++++.++|+++..+++++. +.+...+|++ ++||+||+|||.+|.+ |+.++.
T Consensus 166 ~~~~~~~~r~~l~~~L~~~a~~~~Gv~i~~~~v~~i~~~~~g~~-~~v~~~~g~~--i~ad~vV~AdG~~S~~~~~~lg~ 242 (526)
T 2pyx_A 166 NNYGYHLNAAKFSQLLTEHCTQKLGVTHIRDHVSQIINNQHGDI-EKLITKQNGE--ISGQLFIDCTGAKSLLLGEHLQV 242 (526)
T ss_dssp SCCEEEECHHHHHHHHHHHHHHTSCCEEEECCEEEEEECTTSCE-EEEEESSSCE--EECSEEEECSGGGCCCCCCCTCC
T ss_pred CCeeEEEcHHHHHHHHHHHHHhcCCCEEEEeEEEEEEecCCCcE-EEEEECCCCE--EEcCEEEECCCcchHHHHHHhCC
Confidence 22356789999999999999883378998889999987644321 2344556653 7899999999999999 677765
Q ss_pred CCCCCcc---ceeEEEEe-ccC---CCCCCccEEEecCCCcEEEEecCCCcEEEEEEeCCCCCCCCCchHHHHHHHHhcC
Q 009785 232 PKVDVPS---CFVGLVLE-NCN---LPFENHGHVVLADPSPILFYPISSNEVRCLVDIPGQKVPSISNGEMANYLKTVVA 304 (526)
Q Consensus 232 ~~~~~~~---~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 304 (526)
+...... ...++... ... .+..........+.++++++|+.++. .+.+.+... ..+.++..+.+++.+.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~pl~~~~-~~~~v~~~~---~~~~~~~~~~l~~~l~ 318 (526)
T 2pyx_A 243 PFLSQKSVLFNDRALAIQVPYSDANSPIASCTHSTAQPNGWIWDIGLPTRK-GVGYVYSSS---HTNDIDAQKTLFNYLG 318 (526)
T ss_dssp CEEECHHHHCCCEEEEEEEECSSTTCCCCSSEEEEEETTEEEEEEECSSEE-EEEEEECTT---TCCHHHHHHHHHHHHT
T ss_pred CcccccccccCccEEEEEeeccCCCCCCCCceeEEecCCCeEEEeeCCCce-EEEEEecCC---CCChHHHHHHHHHHHH
Confidence 4322111 11222221 111 11122223334566788999998753 233333222 1233455556665543
Q ss_pred CCCChhhHHHHHhhhcCCCeEeccCCCCCCCCCCCCcEEEEccCCCcCCCCCchhHHHHHHHHHHHHHHHhhhcCCCChH
Q 009785 305 PQIPREIFHSFVAAVDGGNIKTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVILRNLLRHLSNLNDAP 384 (526)
Q Consensus 305 ~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~grv~LiGDAAh~~~P~~G~G~n~al~Da~~La~~L~~~~~~~~~~ 384 (526)
.. .+ .+. . .....++.......+|..|||+|+|||||.++|+.|||+|+|++||..|++.|.. ...
T Consensus 319 ~~-~~----~l~-~---~~~~~~~~~~~~~~~~~~grv~LiGDAAh~~~P~~GqGi~~ai~da~~La~~L~~-----~~~ 384 (526)
T 2pyx_A 319 VD-GA----AAD-K---LEPRQLAINPGYRAKCWQNNCIAIGMAAGFIEPLEASALALIEWTASTLAQQLPP-----NRM 384 (526)
T ss_dssp CC-HH----HHH-H---CCCEEEECCCEEESCSEETTEEECGGGTEECCCTTCHHHHHHHHHHHHHHHTCCS-----CHH
T ss_pred hc-Cc----ccc-c---CCceEEecccCccccccCCCEEEEEhhhcccCccccccHHHHHHHHHHHHHHhhh-----cCC
Confidence 22 11 111 1 1223344433345677789999999999999999999999999999999998863 134
Q ss_pred HHHHHHHHHHHHhcchhHHHHHHHHHHHHhH
Q 009785 385 ALCNYLESFYTLRKPVASTINTLAGALYQVF 415 (526)
Q Consensus 385 ~~~~~L~~Y~~~R~~~~~~~~~~a~~~~~~~ 415 (526)
..+.+++.|+++|+++...+.......|..-
T Consensus 385 ~~~~~l~~Y~~~~~~~~~~~~~~~~~~y~~~ 415 (526)
T 2pyx_A 385 VMDTISARVNERYQQHWQQIIDFLKLHYVIS 415 (526)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5678999999999999999888777766553
No 23
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=100.00 E-value=5.9e-33 Score=283.79 Aligned_cols=316 Identities=17% Similarity=0.152 Sum_probs=201.2
Q ss_pred CcEEEECCCHHHHHHHHHHHhC--CCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCc-ch-hhcccceeeeeeEEEE
Q 009785 61 ADVIVVGAGVAGAALANTLAKD--GRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLE-DC-VEQIDAQRVFGYALFK 136 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~--G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~-~~-l~~~~~~~~~~~~~~~ 136 (526)
.||+||||||+|+++|+.|+++ |++|+|+||++.......+..+++++++.+...++. +. +... ........++.
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 79 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLN-PQFLEDFKLVH 79 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGC-CEEECCEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHh-hccccceEEEe
Confidence 3899999999999999999999 999999999977665667777888877622222333 32 3221 12233344444
Q ss_pred CCeeeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeE
Q 009785 137 DGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLT 215 (526)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~v 215 (526)
.+.... . . .......++|..+.+.|.+.+.+. ++++++++ |+++++.. +++||+|
T Consensus 80 ~g~~~~--~---~--~~~~~~~~~r~~l~~~L~~~~~~~-gv~i~~~~~v~~i~~~~----------------~~~ad~v 135 (381)
T 3c4a_A 80 HNEPSL--M---S--TGVLLCGVERRGLVHALRDKCRSQ-GIAIRFESPLLEHGELP----------------LADYDLV 135 (381)
T ss_dssp SSSEEE--C---C--CCSCEEEEEHHHHHHHHHHHHHHT-TCEEETTCCCCSGGGCC----------------GGGCSEE
T ss_pred CCeeEE--e---c--CCCceeeecHHHHHHHHHHHHHHC-CCEEEeCCEeccchhcc----------------cccCCEE
Confidence 333221 1 0 112235789999999999999987 78999885 77765320 1459999
Q ss_pred EEeecCCccccccccCCC-CCCccceeEEEEe-ccCCCCCCccEEE--ecCCCcEE--EEecCCCcEEEEEEeCC-----
Q 009785 216 IVCDGCFSNLRRSLCNPK-VDVPSCFVGLVLE-NCNLPFENHGHVV--LADPSPIL--FYPISSNEVRCLVDIPG----- 284 (526)
Q Consensus 216 V~ADG~~S~vR~~l~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~--~~p~~~~~~~~~~~~~~----- 284 (526)
|+|||.+|. |+.+.... .... ...+...+ ......+. ...+ ....++++ ++|++++...+.+..+.
T Consensus 136 V~AdG~~S~-R~~l~~~~g~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~ 212 (381)
T 3c4a_A 136 VLANGVNHK-TAHFTEALVPQVD-YGRNKYIWYGTSQLFDQ-MNLVFRTHGKDIFIAHAYKYSDTMSTFIVECSEETYAR 212 (381)
T ss_dssp EECCGGGGG-TCCSSGGGCCCCE-EEEEEEEEEEESSCCSS-EEEEEEEETTEEEEEEEEECSSSCEEEEEEECHHHHHH
T ss_pred EECCCCCch-HHhhhhhcCCCcc-cCCccEEEEecCCCCCc-ceeeEeeCCCcEEEEEEEEecCCeEEEEEECCcccccc
Confidence 999999999 99883211 1111 11111111 11111111 1222 23445443 68998877555444321
Q ss_pred CCCCCCCchHHHHHHHHhcCCCCChhhHHHHHhhhcCCCeEeccCC-CCCCCCCCCCcEEEEccCCCcCCCCCchhHHHH
Q 009785 285 QKVPSISNGEMANYLKTVVAPQIPREIFHSFVAAVDGGNIKTMPNR-SMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVA 363 (526)
Q Consensus 285 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~-~~~~~~~~~grv~LiGDAAh~~~P~~G~G~n~a 363 (526)
...+..+.++..+.+.+.+....+. . ..+.... ..|+.. ..+..+|..|||+|+|||||.++|++|||+|+|
T Consensus 213 ~~~~~~~~~~~~~~l~~~~~~~~~~-~-----~l~~~~~-~~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~~~a 285 (381)
T 3c4a_A 213 ARLGEMSEEASAEYVAKVFQAELGG-H-----GLVSQPG-LGWRNFMTLSHDRCHDGKLVLLGDALQSGHFSIGHGTTMA 285 (381)
T ss_dssp TTSSSSCHHHHHHHHHHHTHHHHTT-C-----CCBCCTT-TCSEEEEECCCSCSEETTEEECGGGTCCCCGGGCCHHHHH
T ss_pred CCcccCChHHHHHHHHHHhcccCCC-c-----hhhcCCC-cceeeeccccCCCcccCCEEEEEccccccCCCccccHHHH
Confidence 1223334445555555433211110 0 0011111 123322 234678899999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcCCCChHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhHcc
Q 009785 364 LSDIVILRNLLRHLSNLNDAPALCNYLESFYTLRKPVASTINTLAGALYQVFSA 417 (526)
Q Consensus 364 l~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~a~~~~~~~~~ 417 (526)
|+||.+|+++|... .+.+++|+.|+++|++++..++..++.+.+++..
T Consensus 286 l~Da~~La~~L~~~------~~~~~aL~~Y~~~r~~~~~~~~~~s~~~~~~~~~ 333 (381)
T 3c4a_A 286 VVVAQLLVKALCTE------DGVPAALKRFEERALPLVQLFRGHADNSRVWFET 333 (381)
T ss_dssp HHHHHHHHHHHHHS------SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcc------ccHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhc
Confidence 99999999999863 1357899999999999999999999888766544
No 24
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.98 E-value=5.9e-31 Score=282.46 Aligned_cols=346 Identities=17% Similarity=0.140 Sum_probs=209.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhC------CCeEEEEecCCCCCCc-ccceeeCcchHHHHHHcCCcchhhcccceee-
Q 009785 58 PFDADVIVVGAGVAGAALANTLAKD------GRRVHVIERDLSEPDR-IVGELLQPGGYLKLIELGLEDCVEQIDAQRV- 129 (526)
Q Consensus 58 ~~~~dVvIVGaG~aGl~~A~~La~~------G~~V~l~Er~~~~~~~-~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~- 129 (526)
.+++||+||||||+|+++|+.|+++ |++|+|+||.+..... ..|..+.+++++.| ++-+...........
T Consensus 33 ~~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~l--l~~~~~~g~~~~~~~~ 110 (584)
T 2gmh_A 33 AEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEEL--FPDWKEKGAPLNTPVT 110 (584)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHH--CTTHHHHTCCCCEECC
T ss_pred ccCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHH--HHHHHhcCCceeeeec
Confidence 3469999999999999999999999 9999999999765543 35677888877665 221111000000011
Q ss_pred -eeeEEEECCeeeeecCCC-cC-CCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeC-CeEEEEEEEe--
Q 009785 130 -FGYALFKDGNRTQISYPL-EK-FHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEK-GTIKGVQYKT-- 202 (526)
Q Consensus 130 -~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~-~~v~gv~v~~-- 202 (526)
....++..... ..++. .. ......++.++|..+.+.|.+.+.+. ++++++++ |+++..++ +.+.+|++.+
T Consensus 111 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~-Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g 187 (584)
T 2gmh_A 111 EDRFGILTEKYR--IPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEAL-GVEVYPGYAAAEILFHEDGSVKGIATNDVG 187 (584)
T ss_dssp EEEEEEECSSCE--EECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHT-TCEEETTCCEEEEEECTTSSEEEEEECCEE
T ss_pred hhheeeeccCCC--ccccccCccccccCCCEEEeHHHHHHHHHHHHHHc-CCEEEcCCEEEEEEEcCCCCEEEEEeCCcc
Confidence 11222222211 12221 11 01123356789999999999999987 89999995 99998765 5576776643
Q ss_pred --CCCcE-------EEEEcCeEEEeecCCccccccc----cCCCCCCcc-ceeEEE-Eecc--CCCCCCccEEEec----
Q 009785 203 --KAGEE-------LTAYAPLTIVCDGCFSNLRRSL----CNPKVDVPS-CFVGLV-LENC--NLPFENHGHVVLA---- 261 (526)
Q Consensus 203 --~~G~~-------~~i~a~~vV~ADG~~S~vR~~l----~~~~~~~~~-~~~~~~-~~~~--~~~~~~~~~~~~~---- 261 (526)
.+|+. .+++||+||+|||.+|.+|+++ +......+. ...++. .... ....+.....+++
T Consensus 188 ~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~vr~~l~~~~gl~~~~~p~~~g~g~~~~~~v~~~~~~~~~~~~~~g~~~~ 267 (584)
T 2gmh_A 188 IQKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANCEPQTYGIGLKELWVIDEKKWKPGRVDHTVGWPLD 267 (584)
T ss_dssp ECTTSCEEEEEECCCEEECSEEEECCCTTCHHHHHHHHHTTTTTTSCCCCEEEEEEEEEECCGGGCCTTEEEEEEETTSC
T ss_pred ccCCCCcccccCCceEEECCEEEEeeCCCchHHHHHHHHhCCCCCCCchhHHhhhhhheecCcccccCCeEEEEEecccc
Confidence 35543 3688999999999999999987 433211111 111211 1111 1112222223332
Q ss_pred --CCCcEEEEecC--CCcEEEEEEeCCCCCC-CCCchHHHHHHHHhcCCCCChhhHHHHHhhhcCCCe---EeccCCCCC
Q 009785 262 --DPSPILFYPIS--SNEVRCLVDIPGQKVP-SISNGEMANYLKTVVAPQIPREIFHSFVAAVDGGNI---KTMPNRSMP 333 (526)
Q Consensus 262 --~~~~~~~~p~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~i---~~~~~~~~~ 333 (526)
..+..++||.. ++..++.+....+... ..+ ..+.++++.. .+.+.+.+... +.... ..++.....
T Consensus 268 ~~~~gg~~~~~~~~~~~~~~vg~~~~~~~~~~~~~---~~~~l~~~~~---~p~i~~~l~~~-~~~~~~~~~~~~~~~~~ 340 (584)
T 2gmh_A 268 RHTYGGSFLYHLNEGEPLLALGFVVGLDYQNPYLS---PFREFQRWKH---HPSIKPTLEGG-KRIAYGARALNEGGFQS 340 (584)
T ss_dssp TTSCEEEEEEECCSSSCEEEEEEEEETTCCCTTCC---HHHHHHHHTT---STTTHHHHTTC-EEEEEEEEEEECCGGGG
T ss_pred CCcCCceEEEEecCCCCeEEEEEEEecCcccccCC---hHHHHHHHHh---ChHHHHHhCCC-eEEEecceEccCCCccc
Confidence 12345778887 6777777765433211 112 1233333322 12333332111 00011 112233334
Q ss_pred CCCCCCCcEEEEccCCCcCCCCCchhHHHHHHHHHHHHHHHhhhcCCCChHHHHHH---HHHHHHHhcch-hHHHHHHHH
Q 009785 334 AAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVILRNLLRHLSNLNDAPALCNY---LESFYTLRKPV-ASTINTLAG 409 (526)
Q Consensus 334 ~~~~~~grv~LiGDAAh~~~P~~G~G~n~al~Da~~La~~L~~~~~~~~~~~~~~~---L~~Y~~~R~~~-~~~~~~~a~ 409 (526)
..+|..+|++|+|||||.++|++|||+|+||+||.+||++|..+...++. ..+++ |++|+++|++. +...+..++
T Consensus 341 ~~~~~~~rv~LvGDAAh~~~P~~GqG~~~Ai~da~~LA~~L~~~~~~g~~-~~~~a~~~L~~Ye~~r~~~~v~~~l~~~r 419 (584)
T 2gmh_A 341 IPKLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLTSENL-QSKTIGLHVTEYEDNLKNSWVWKELYSVR 419 (584)
T ss_dssp CCCCEETTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHHTCCCC-CCSSSSCCCTHHHHHHHTSHHHHHHHHTT
T ss_pred CCccccCCEEEEcccccccCccccccHHHHHHHHHHHHHHHHHHHHcCCc-chhhhhhhHHHHHHHHHHhHHHHHHHHHh
Confidence 67788999999999999999999999999999999999999876432210 11343 89999999987 566666666
Q ss_pred HHHHhHc
Q 009785 410 ALYQVFS 416 (526)
Q Consensus 410 ~~~~~~~ 416 (526)
.+..+|.
T Consensus 420 ~~~~~~~ 426 (584)
T 2gmh_A 420 NIRPSCH 426 (584)
T ss_dssp TTTGGGG
T ss_pred ChhHHHH
Confidence 6655553
No 25
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.97 E-value=3.4e-29 Score=265.82 Aligned_cols=340 Identities=16% Similarity=0.070 Sum_probs=213.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHh---CCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcch--hhcccceeeeeeEE
Q 009785 60 DADVIVVGAGVAGAALANTLAK---DGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDC--VEQIDAQRVFGYAL 134 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~---~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~--l~~~~~~~~~~~~~ 134 (526)
.+||+|||||++|+++|+.|++ .|++|+|+||... +....|+.+.+.....++.+|+.+. +.........+..+
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~-~~~~~g~~~~~~~~~~l~~lgi~~~~~~~~~~~~~~~~~~~ 80 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNV-RRIGVGEATFSTVRHFFDYLGLDEREWLPRCAGGYKLGIRF 80 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC--------CCEECCTTHHHHHHHHTCCHHHHHHHTTCEEECEEEE
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCC-CceeeccccCcchHHHHHHcCCCHHHHHHHcCCeEecccee
Confidence 3699999999999999999999 9999999999853 3344677888999999999999874 44433222122111
Q ss_pred -----------EECCe-------ee----------eec-------------CC-------CcCC----C-----------
Q 009785 135 -----------FKDGN-------RT----------QIS-------------YP-------LEKF----H----------- 151 (526)
Q Consensus 135 -----------~~~~~-------~~----------~~~-------------~~-------~~~~----~----------- 151 (526)
...+. .. ... +. ...+ .
T Consensus 81 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 160 (511)
T 2weu_A 81 ENWSEPGEYFYHPFERLRVVDGFNMAEWWLAVGDRRTSFSEACYLTHRLCEAKRAPRMLDGSLFASQVDESLGRSTLAEQ 160 (511)
T ss_dssp ESSSSTTCEEEEESCCCCEETTEEHHHHHHHHC----CHHHHHCHHHHHHHTTBCSBCTTSCBCC------CCSCCGGGC
T ss_pred cCCCCCCCceEcCCCCCCCCCCCchHHHHHhccccccCcccccccccCHHHhhhhHHhHhcCCccccccccccccccccC
Confidence 01010 00 000 00 0011 1
Q ss_pred C--CcccceeechHHHHHHHHHHHcCCCeEEEeceEEEEEeeCC-eEEEEEEEeCCCcEEEEEcCeEEEeecCCccccc-
Q 009785 152 S--DVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKG-TIKGVQYKTKAGEELTAYAPLTIVCDGCFSNLRR- 227 (526)
Q Consensus 152 ~--~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~v~~l~~~~~-~v~gv~v~~~~G~~~~i~a~~vV~ADG~~S~vR~- 227 (526)
. ...++.+++..+.+.|.+.+.+. +++++.++|+++..+++ .+.+ +...+|+ +++||+||+|||.+|.+|+
T Consensus 161 ~~~~~~~~~~~~~~l~~~L~~~a~~~-gv~~~~~~v~~i~~~~~~~~~~--v~~~~g~--~~~ad~vV~A~G~~S~~~~~ 235 (511)
T 2weu_A 161 RAQFPYAYHFDADEVARYLSEYAIAR-GVRHVVDDVQHVGQDERGWISG--VHTKQHG--EISGDLFVDCTGFRGLLINQ 235 (511)
T ss_dssp CSCCSCEEEECHHHHHHHHHHHHHHT-TCEEEECCEEEEEECTTSCEEE--EEESSSC--EEECSEEEECCGGGCCCCCC
T ss_pred cCCCCeeEEEcHHHHHHHHHHHHHHC-CCEEEECeEeEEEEcCCCCEEE--EEECCCC--EEEcCEEEECCCcchHHHHH
Confidence 1 23456789999999999999886 78888889999987543 3333 4456675 4789999999999999954
Q ss_pred cccCCCCC---CccceeEEEEe-ccCCC--CCCccEEEecCCCcEEEEecCCCcEEEEEEeCCCCCCCCCchHHHHHHHH
Q 009785 228 SLCNPKVD---VPSCFVGLVLE-NCNLP--FENHGHVVLADPSPILFYPISSNEVRCLVDIPGQKVPSISNGEMANYLKT 301 (526)
Q Consensus 228 ~l~~~~~~---~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 301 (526)
.++.+... ......++... ....+ ..........+.++++++|..+ ...+.+.+..+ ..+.++..+.+.+
T Consensus 236 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~-~~~~g~~~~~~---~~~~~~~~~~l~~ 311 (511)
T 2weu_A 236 TLGGRFQSFSDVLPNNRAVALRVPRENDEDMRPYTTATAMSAGWMWTIPLFK-RDGNGYVYSDE---FISPEEAERELRS 311 (511)
T ss_dssp CTCCCEEECTTTCCCCEEEEEEEECSSGGGCCSSEEEEEETTEEEEEEECSS-EEEEEEEECTT---TSCHHHHHHHHHH
T ss_pred HhCCCCccccccCcccceEEEEeccCCCCCCCcceeceecCCCcEEEEECCC-ceEEEEEECCC---CCCHHHHHHHHHH
Confidence 55554211 11111222211 11111 1222234455667889999987 34444333322 2234455555555
Q ss_pred hcCCCCChhhHHHHHhhhcCCCeEeccCCCCCCCCCCCCcEEEEccCCCcCCCCCchhHHHHHHHHHHHHHHHhhhcCCC
Q 009785 302 VVAPQIPREIFHSFVAAVDGGNIKTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVILRNLLRHLSNLN 381 (526)
Q Consensus 302 ~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~grv~LiGDAAh~~~P~~G~G~n~al~Da~~La~~L~~~~~~~ 381 (526)
.+.. .+ .+ . .....+.......++..+|++|+|||||.++|++|+|+|+|++||..|++.|..-
T Consensus 312 ~~~~-~~-~~--------~--~~~~~~~~~~~~~~~~~~rv~liGDAAh~~~P~~g~G~~~a~~da~~La~~l~~~---- 375 (511)
T 2weu_A 312 TVAP-GR-DD--------L--EANHIQMRIGRNERTWINNCVAVGLSAAFVEPLESTGIFFIQHAIEQLVKHFPGE---- 375 (511)
T ss_dssp HHCT-TC-TT--------S--CCEEEECCCEEESCSEETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHTCCCT----
T ss_pred HhCc-cc-cc--------c--cceeEEeeccccccccCCCEEEEechhhccCccccccHHHHHHHHHHHHHHhccC----
Confidence 4421 11 11 1 1111222222345566799999999999999999999999999999999998741
Q ss_pred ChHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhHccCCchHHHHHH
Q 009785 382 DAPALCNYLESFYTLRKPVASTINTLAGALYQVFSASPDEARKEMR 427 (526)
Q Consensus 382 ~~~~~~~~L~~Y~~~R~~~~~~~~~~a~~~~~~~~~~~~~~~~~lr 427 (526)
...+.+|+.|+++|+++...+.......+........+.....+
T Consensus 376 --~~~~~~l~~Y~~~~~~~~~~~~~~~~~~y~~~~r~~~~fw~~~~ 419 (511)
T 2weu_A 376 --RWDPVLISAYNERMAHMVDGVKEFLVLHYKGAQREDTPYWKAAK 419 (511)
T ss_dssp --TCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCSHHHHHHH
T ss_pred --CCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHhcc
Confidence 12357999999999999999888877777765443334444433
No 26
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.97 E-value=3e-29 Score=267.76 Aligned_cols=325 Identities=16% Similarity=0.102 Sum_probs=208.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHh---CCCeEEEEecCCCCCCcccceeeCcchHH-HHHHcCCcch--hhcccceeeeeeE
Q 009785 60 DADVIVVGAGVAGAALANTLAK---DGRRVHVIERDLSEPDRIVGELLQPGGYL-KLIELGLEDC--VEQIDAQRVFGYA 133 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~---~G~~V~l~Er~~~~~~~~~g~~l~~~~~~-~l~~lGl~~~--l~~~~~~~~~~~~ 133 (526)
.+||+|||||++|+++|+.|++ .|++|+|||+.... ....|+.+.+++.. .++.+|+.+. +.........+..
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~-~~~~g~~~~~~~~~~~l~~lG~~~~~~~~~~~~~~~~g~~ 83 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAIP-RIGVGEATIPSLQKVFFDFLGIPEREWMPQVNGAFKAAIK 83 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSSC-CCCSCEECCTHHHHHTHHHHTCCHHHHGGGGTCEEECEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCCC-CcCCCcccchhHHHHHHHHhCCCHHHHHHhcCchhhCCcc
Confidence 4799999999999999999999 99999999997543 33447888899999 9999999764 4432221111111
Q ss_pred E----------------EECCeee-----ee------------cCC---------------------CcCCCCCccccee
Q 009785 134 L----------------FKDGNRT-----QI------------SYP---------------------LEKFHSDVAGRGF 159 (526)
Q Consensus 134 ~----------------~~~~~~~-----~~------------~~~---------------------~~~~~~~~~~~~~ 159 (526)
+ ...+... .. ... ...+ ..+.++.+
T Consensus 84 ~~~w~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~i 162 (538)
T 2aqj_A 84 FVNWRKSPDPSRDDHFYHLFGNVPNCDGVPLTHYWLRKREQGFQQPMEYACYPQPGALDGKLAPCLSDGTR-QMSHAWHF 162 (538)
T ss_dssp EESCSSSCCTTSCCEEEEESSCCCEETTEEHHHHHHHHHHTTCCSCHHHHHCSCHHHHHTTBCSBCTTCCB-CSCCEEEE
T ss_pred ccCcCcccccCCCCceECCCCccCccccCchhHHHHHhcccccccCccccccccccHhhhccchHhhcCCc-CCCccEEE
Confidence 1 1111000 00 000 0000 12335678
Q ss_pred echHHHHHHHHHHHcCCCeEEEeceEEEEEeeCC-eEEEEEEEeCCCcEEEEEcCeEEEeecCCccccc-cccCCCCCCc
Q 009785 160 HNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKG-TIKGVQYKTKAGEELTAYAPLTIVCDGCFSNLRR-SLCNPKVDVP 237 (526)
Q Consensus 160 ~~~~l~~~L~~~a~~~~~v~i~~~~v~~l~~~~~-~v~gv~v~~~~G~~~~i~a~~vV~ADG~~S~vR~-~l~~~~~~~~ 237 (526)
++..+.+.|.+.+.+. +++++.++|+++..+++ .+.+ +...+|+ +++||+||+|||.+|.+|+ .++.+.....
T Consensus 163 ~~~~l~~~L~~~a~~~-gv~~~~~~v~~i~~~~~g~~~~--v~~~~g~--~i~ad~vV~A~G~~s~~~~~~lg~~~~~~~ 237 (538)
T 2aqj_A 163 DAHLVADFLKRWAVER-GVNRVVDEVVDVRLNNRGYISN--LLTKEGR--TLEADLFIDCSGMRGLLINQALKEPFIDMS 237 (538)
T ss_dssp CHHHHHHHHHHHHHHT-TCEEEECCEEEEEECTTSCEEE--EEETTSC--EECCSEEEECCGGGCCCCCCCTCCCEEECT
T ss_pred eHHHHHHHHHHHHHHC-CCEEEEeeEeEEEEcCCCcEEE--EEECCCc--EEEeCEEEECCCCchhhHHHHhCCCccccc
Confidence 9999999999999886 78888889999987544 3333 4456675 4789999999999999955 4444321111
Q ss_pred ---cceeEEEEe-ccCCC---CCCccEEEecCCCcEEEEecCCCcEEEEEEeCCCCCCCCCchHHHHHHHHhcCCCCChh
Q 009785 238 ---SCFVGLVLE-NCNLP---FENHGHVVLADPSPILFYPISSNEVRCLVDIPGQKVPSISNGEMANYLKTVVAPQIPRE 310 (526)
Q Consensus 238 ---~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 310 (526)
....++... ....+ ..........+.++++++|+.++ ..+.+.+... ..+.++..+.+.+.+.. ++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~-~~~g~v~~~~---~~~~~~~~~~l~~~~~~--~~- 310 (538)
T 2aqj_A 238 DYLLCDSAVASAVPNDDARDGVEPYTSSIAMNSGWTWKIPMLGR-FGSGYVFSSH---FTSRDQATADFLKLWGL--SD- 310 (538)
T ss_dssp TTCCCCEEEEEEEECCHHHHCCCSSEEEEECSSEEEEEEEETTE-EEEEEEECTT---TSCHHHHHHHHHHHHTC--CT-
T ss_pred cccccceEEEEecccCCcccCCCCceeeeecCCceEEEecCCCc-eEEEEEEcCC---CCChHHHHHHHHHHhcC--CC-
Confidence 111222221 11101 11122333456678899999874 3333333221 12344555555554432 11
Q ss_pred hHHHHHhhhcCCCeEeccCCCCCCCCCCCCcEEEEccCCCcCCCCCchhHHHHHHHHHHHHHHHhhhcCCCChHHHHHHH
Q 009785 311 IFHSFVAAVDGGNIKTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVILRNLLRHLSNLNDAPALCNYL 390 (526)
Q Consensus 311 l~~~~~~~~~~~~i~~~~~~~~~~~~~~~grv~LiGDAAh~~~P~~G~G~n~al~Da~~La~~L~~~~~~~~~~~~~~~L 390 (526)
+ .....++.......++..+||+|+|||||.++|++|||+|+|++||..|++.|..- ...+.+|
T Consensus 311 ~----------~~~~~~~~~~~~~~~~~~grvvliGDAAh~~~P~~gqG~~~a~~da~~La~~L~~~------~~~~~~l 374 (538)
T 2aqj_A 311 N----------QPLNQIKFRVGRNKRAWVNNCVSIGLSSCFLEPLESTGIYFIYAALYQLVKHFPDT------SFDPRLS 374 (538)
T ss_dssp T----------CCCEEEECCCEEESCSEETTEEECGGGTEECCGGGSCHHHHHHHHHHHHHHTCCBT------TCCHHHH
T ss_pred C----------CCceEEeeccccccccccCCEEEEcccccccCcchhccHHHHHHHHHHHHHHhhcc------CCCHHHH
Confidence 1 11122333333355677899999999999999999999999999999999988631 2235799
Q ss_pred HHHHHHhcchhHHHHHHHHHHHHh
Q 009785 391 ESFYTLRKPVASTINTLAGALYQV 414 (526)
Q Consensus 391 ~~Y~~~R~~~~~~~~~~a~~~~~~ 414 (526)
+.|+++|+++...+.......+..
T Consensus 375 ~~Y~~~~~~~~~~~~~~~~~~y~~ 398 (538)
T 2aqj_A 375 DAFNAEIVHMFDDCRDFVQAHYFT 398 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcc
Confidence 999999999988887766666654
No 27
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.97 E-value=6e-29 Score=265.79 Aligned_cols=330 Identities=14% Similarity=0.118 Sum_probs=212.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHh---CCCeEEEEecCCCCCCcccceeeCcchHH-HHHHcCCcch--hhcccceeeeeeE
Q 009785 60 DADVIVVGAGVAGAALANTLAK---DGRRVHVIERDLSEPDRIVGELLQPGGYL-KLIELGLEDC--VEQIDAQRVFGYA 133 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~---~G~~V~l~Er~~~~~~~~~g~~l~~~~~~-~l~~lGl~~~--l~~~~~~~~~~~~ 133 (526)
.+||+|||||++|+++|+.|++ .|++|+|||+.+.+ ....|+.+.|++.+ .++.+|+.+. +.........+..
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~-~~~~g~~~~p~~~~~~l~~lGi~~~~~~~~~~~~~~~g~~ 103 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDIP-TLGVGEATIPNLQTAFFDFLGIPEDEWMRECNASYKVAIK 103 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCCC-CCCCCEECCTHHHHHTHHHHTCCHHHHHHHTTCEEECEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCCC-ccceeeeechhHHHHHHHHhCCChHHHHHhcCCeEEEeee
Confidence 5899999999999999999999 99999999997543 33457888999999 9999999865 5433222112221
Q ss_pred E--EECC-------------e-eeeecCC------------------------------------CcCCC----------
Q 009785 134 L--FKDG-------------N-RTQISYP------------------------------------LEKFH---------- 151 (526)
Q Consensus 134 ~--~~~~-------------~-~~~~~~~------------------------------------~~~~~---------- 151 (526)
+ |... . .....+. ..+..
T Consensus 104 ~~~w~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (550)
T 2e4g_A 104 FINWRTAGEGTSEARELDGGPDHFYHSFGLLKYHEQIPLSHYWFDRSYRGKTVEPFDYACYKEPVILDANRSPRRLDGSK 183 (550)
T ss_dssp EESSSSCCCCCSSCCEETTEESEEEEESSCCCEETTEEHHHHHHHHHHTTSCCCCHHHHHCSHHHHHHTTBCSBCTTSCB
T ss_pred EeecccccccccccccccCCCCeeEecCCccCCCCcccHHHHHHhhcccccccccccccccchhhHHHhhhhhHhhcCCC
Confidence 1 1110 0 0000000 00000
Q ss_pred CCcccceeechHHHHHHHHHHHcCCCeEEEeceEEEEEeeC-CeEEEEEEEeCCCcEEEEEcCeEEEeecCCccc-cccc
Q 009785 152 SDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEK-GTIKGVQYKTKAGEELTAYAPLTIVCDGCFSNL-RRSL 229 (526)
Q Consensus 152 ~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~v~~l~~~~-~~v~gv~v~~~~G~~~~i~a~~vV~ADG~~S~v-R~~l 229 (526)
....++.+++..+.+.|.+.+.+.+++++++++|+++..++ +.+.+ +...+|+ +++||+||+|||.+|.+ ++.+
T Consensus 184 ~~~~~~~~~~~~l~~~L~~~~~~~~Gv~i~~~~V~~i~~~~~g~~~~--v~~~~G~--~i~ad~vI~A~G~~S~~~~~~l 259 (550)
T 2e4g_A 184 VTNYAWHFDAHLVADFLRRFATEKLGVRHVEDRVEHVQRDANGNIES--VRTATGR--VFDADLFVDCSGFRGLLINKAM 259 (550)
T ss_dssp CSCCEEEECHHHHHHHHHHHHHHHSCCEEEECCEEEEEECTTSCEEE--EEETTSC--EEECSEEEECCGGGCCCCCCCT
T ss_pred CCCcceEEcHHHHHHHHHHHHHhcCCcEEEECeEeEEEEcCCCCEEE--EEECCCC--EEECCEEEECCCCchhhHHHHh
Confidence 12235678999999999999988757888888999998754 33433 4456675 47799999999999999 5666
Q ss_pred cCCCCCC---ccceeEEEEe-ccCCC---CCCccEEEecCCCcEEEEecCCCcEEEEEEeCCCCCCCCCchHHHHHHHHh
Q 009785 230 CNPKVDV---PSCFVGLVLE-NCNLP---FENHGHVVLADPSPILFYPISSNEVRCLVDIPGQKVPSISNGEMANYLKTV 302 (526)
Q Consensus 230 ~~~~~~~---~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 302 (526)
+...... ......+... ....+ ..........+.++++++|+.+. ..+.+.+... ..+.++..+.+.+.
T Consensus 260 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ipl~~~-~~~g~v~~~~---~~~~~~~~~~l~~~ 335 (550)
T 2e4g_A 260 EEPFLDMSDHLLNDSAVATQVPHDDDANGVEPFTSAIAMKSGWTWKIPMLGR-FGTGYVYSSR---FATEDEAVREFCEM 335 (550)
T ss_dssp CCCEEECTTTCCCCEEEEEEEECCHHHHCCCSSEEEEECSSEEEEEEECSSE-EEEEEEECTT---TSCHHHHHHHHHHH
T ss_pred CCCcccccccccccceEEEeecccCCcccCCCceeeeecCCceEEEccCCCc-cceEEEEecC---CCChHHHHHHHHHh
Confidence 6542111 1111222211 11111 11222333446678889998763 3333333221 12345556666665
Q ss_pred cCCCCChhhHHHHHhhhcCCCeEeccCCCCCCCCCCCCcEEEEccCCCcCCCCCchhHHHHHHHHHHHHHHHhhhcCCCC
Q 009785 303 VAPQIPREIFHSFVAAVDGGNIKTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVILRNLLRHLSNLND 382 (526)
Q Consensus 303 ~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~grv~LiGDAAh~~~P~~G~G~n~al~Da~~La~~L~~~~~~~~ 382 (526)
+... + .+ . ....++.......++..+|++++|||||.++|++|||+|+|++||..|++.|..
T Consensus 336 ~~~~-p-~l--------~--~~~~i~~~~~~~~~~~~~rvvliGDAAh~~~P~~GqGi~~a~~da~~La~~L~~------ 397 (550)
T 2e4g_A 336 WHLD-P-ET--------Q--PLNRIRFRVGRNRRAWVGNCVSIGTSSCFVEPLESTGIYFVYAALYQLVKHFPD------ 397 (550)
T ss_dssp TTCC-T-TT--------S--CCEEEECCCEEESCSEETTEEECSTTTEECCGGGSCHHHHHHHHHHHHHHTCCC------
T ss_pred hCcC-c-cc--------C--CCceEEecCCCccccccCCEEEEehhhcccCccchhhHHHHHHHHHHHHHhccc------
Confidence 4321 1 11 1 111122222224456679999999999999999999999999999999998863
Q ss_pred hHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhHc
Q 009785 383 APALCNYLESFYTLRKPVASTINTLAGALYQVFS 416 (526)
Q Consensus 383 ~~~~~~~L~~Y~~~R~~~~~~~~~~a~~~~~~~~ 416 (526)
....+.+++.|+++|++....+.......|.+-.
T Consensus 398 ~~~~~~~l~~Y~~~~~~~~~~i~~~~~~~y~~~~ 431 (550)
T 2e4g_A 398 KSLNPVLTARFNREIETMFDDTRDFIQAHFYFSP 431 (550)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 1223689999999999999999888887777543
No 28
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.94 E-value=6.1e-26 Score=235.29 Aligned_cols=321 Identities=14% Similarity=0.124 Sum_probs=180.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCc---cc-ceeeCcchHHHHHHcCCcchhhcccceeeeeeEE
Q 009785 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDR---IV-GELLQPGGYLKLIELGLEDCVEQIDAQRVFGYAL 134 (526)
Q Consensus 59 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~---~~-g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~ 134 (526)
+++||+||||||+|+++|+.|+++|++|+|+||++.+... .. +..+...++..++.+|+...... .....+..+
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~~--~~~~~~~~~ 98 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRKPDEYSGLRLLNTVAHNAVTVQREVALDVNEWPSE--EFGYFGHYY 98 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCCGGGSTTSCCCCCCCBCHHHHHHHHHTTCCCSCHH--HHCEEEEEE
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCChHhhcccccccchhccchhhhhhhhcChhhhhhh--cccccceeE
Confidence 3479999999999999999999999999999998632211 11 12234456777778876421111 112333333
Q ss_pred EECCeeeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEeceE--EEEEeeCCeEEEEEEEeCCCcEEEEEc
Q 009785 135 FKDGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTV--TSLLEEKGTIKGVQYKTKAGEELTAYA 212 (526)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~v--~~l~~~~~~v~gv~v~~~~G~~~~i~a 212 (526)
...+.. ...+.. . ....+..+++..+...|.+.+.+. +++++..++ .++.+ ....+
T Consensus 99 ~~~~~~-~~~~~~-~--~~~~~~~v~~~~l~~~L~~~~~~~-Gv~v~~~~v~~~~l~~-----------------~~~~a 156 (430)
T 3ihm_A 99 YVGGPQ-PMRFYG-D--LKAPSRAVDYRLYQPMLMRALEAR-GGKFCYDAVSAEDLEG-----------------LSEQY 156 (430)
T ss_dssp EECSSS-CEEEEE-E--EEEEEBEECHHHHHHHHHHHHHHT-TCEEEECCCCGGGHHH-----------------HHTTS
T ss_pred EECCCC-ccccch-h--cCCcceeecHHHHHHHHHHHHHHc-CCEEEEEecchhhhhh-----------------hcccC
Confidence 332221 111100 0 012346788889999999999887 677665321 11100 01248
Q ss_pred CeEEEeecCCccccccccCC---CCCCccceeEEEE-eccCCCCCC-ccEEEecCCCcEEEEecCC--CcEEEEE--EeC
Q 009785 213 PLTIVCDGCFSNLRRSLCNP---KVDVPSCFVGLVL-ENCNLPFEN-HGHVVLADPSPILFYPISS--NEVRCLV--DIP 283 (526)
Q Consensus 213 ~~vV~ADG~~S~vR~~l~~~---~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~p~~~--~~~~~~~--~~~ 283 (526)
|+||+|||.+|.+|...... ....+........ .....+.+. ....+....+.++++|... +..++.+ ..+
T Consensus 157 d~VV~AdG~~S~~~~~~~~~~~~~~~~p~r~~~~~~~~g~~~~~~~~~~~~~~~~~G~~~~~p~~~~~g~~~~~~~~~~~ 236 (430)
T 3ihm_A 157 DLLVVCTGKYALGKVFEKQSENSPFEKPQRALCVGLFKGIKEAPIRAVTMSFSPGHGELIEIPTLSFNGMSTALVLENHI 236 (430)
T ss_dssp SEEEECCCCTTGGGGSCBCGGGCCCSSCSSEEEEEEEESBCCCSSCCEEEEEETTTEEEEEEEEEETTEEEEEEEEEECT
T ss_pred CEEEECCCCcchHHhccCCCCCCcccCCCeeEEEEEEccCCCCCcCeeeeeecCCCcceEEecccCCCcceEEEEEEecC
Confidence 99999999999887543221 1111112222221 121112221 2223344556777778532 3333333 223
Q ss_pred CCCCCC-------CCchHHHHHHHHhcCCCCChhhHHHHHhhhc------CCCe---EeccCCCCCCCCCCCCcEEE-Ec
Q 009785 284 GQKVPS-------ISNGEMANYLKTVVAPQIPREIFHSFVAAVD------GGNI---KTMPNRSMPAAPYPTPGALL-MG 346 (526)
Q Consensus 284 ~~~~~~-------~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~------~~~i---~~~~~~~~~~~~~~~grv~L-iG 346 (526)
...... .++++..+.+.+.+....| .+.+.+ .... ...+ ..++....+..+|..||++| +|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~G 314 (430)
T 3ihm_A 237 GSDLEVLAHTKYDDDPRAFLDLMLEKLGKHHP-SVAERI-DPAEFDLANSSLDILQGGVVPAFRDGHATLNNGKTIIGLG 314 (430)
T ss_dssp TSSSGGGGTSCTTTCHHHHHHHHHHHHHHHCH-HHHTTB-CTTTCEESSSTTSEEEECCCCEEBCSEEECTTSCEEEECG
T ss_pred CCcHHHhccccCCCCHHHHHHHHHHHHHHhCc-cHHHHH-hhchhccccCccceeecceeecccccccccCCCCEEEEec
Confidence 221111 1333333333333221111 111111 1111 1111 23444444567788999988 99
Q ss_pred cCCCcCCCCCchhHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHHHhc-chhHHHHHHHHHH
Q 009785 347 DAFNMRHPLTGGGMTVALSDIVILRNLLRHLSNLNDAPALCNYLESFYTLRK-PVASTINTLAGAL 411 (526)
Q Consensus 347 DAAh~~~P~~G~G~n~al~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~-~~~~~~~~~a~~~ 411 (526)
||||.++|++|||+|+||+||.+|+++|.... + .+++|++|+.+|+ +++......++.+
T Consensus 315 DAah~~~p~~g~G~~~a~~da~~l~~~l~~~~---~---~~~~~~~~~~~r~~~~~~~~~~~~~~~ 374 (430)
T 3ihm_A 315 DIQATVDPVLGQGANMASYAAWILGEEILAHS---V---YDLRFSEHLERRRQDRVLCATRWTNFT 374 (430)
T ss_dssp GGTEECCGGGCCHHHHHHHHHHHHHHHHHHCS---C---CSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccccCCCchhhhHHHHHHHHHHHHHHHHhcC---C---HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999752 1 4689999999998 5555555555444
No 29
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.92 E-value=2.8e-25 Score=234.03 Aligned_cols=308 Identities=14% Similarity=0.055 Sum_probs=180.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECC
Q 009785 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDG 138 (526)
Q Consensus 59 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 138 (526)
..+||+||||||+|+++|+.|+++|++|+|+|+.+... +.....+.+.+++.|+.+|+.+.....
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g-~~~~~~~~~~~~~~l~~~g~~~~~~~~-------------- 155 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFS-RHNVLHLWPFTIHDLRALGAKKFYGRF-------------- 155 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCC-CCCEEECCHHHHHHHHTTTHHHHCTTT--------------
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccC-CCCcccCChhHHHHHHHcCCccccccc--------------
Confidence 46899999999999999999999999999999986543 223455678888889888875432110
Q ss_pred eeeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEee--CCeEEEEEEEeC-CCcEEEEEcCe
Q 009785 139 NRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEE--KGTIKGVQYKTK-AGEELTAYAPL 214 (526)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~--~~~v~gv~v~~~-~G~~~~i~a~~ 214 (526)
. . .....+++..+.+.|.+.+.+. +++++.++ |+++..+ ++....|++.+. +|+..+++||+
T Consensus 156 -------~-----~-~~~~~~~~~~l~~~L~~~~~~~-gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~ 221 (497)
T 2bry_A 156 -------C-----T-GTLDHISIRQLQLLLLKVALLL-GVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDV 221 (497)
T ss_dssp -------T-----C-TTCCEEEHHHHHHHHHHHHHHT-TCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSE
T ss_pred -------c-----c-cccccCCHHHHHHHHHHHHHhC-CCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCE
Confidence 0 0 0112467788999999999885 79998885 9999864 233334665545 66433578999
Q ss_pred EEEeecCCccccccccCCCCCCcc-ceeEEEEec-----cCCCCCCccEEEecC----------CC-cE-EEEecCCCcE
Q 009785 215 TIVCDGCFSNLRRSLCNPKVDVPS-CFVGLVLEN-----CNLPFENHGHVVLAD----------PS-PI-LFYPISSNEV 276 (526)
Q Consensus 215 vV~ADG~~S~vR~~l~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~~~~~~~----------~~-~~-~~~p~~~~~~ 276 (526)
||+|||.+|.+|+..+....+... .....+... ..... ..+..+..+ .+ +. -++|+.++..
T Consensus 222 VV~A~G~~S~~r~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~-~~G~~~~~~~~~f~~~~~~~Gi~~~~~~~~~~~~~ 300 (497)
T 2bry_A 222 LISAAGGKFVPEGFTIREMRGKLAIGITANFVNGRTVEETQVPE-ISGVARIYNQKFFQSLLKATGIDLENIVYYKDETH 300 (497)
T ss_dssp EEECCCTTCCCTTCEEEEEECSCCEEEEEEEECCCCHHHHTSCC-BCC----CCSSHHHHHHHHHCCCEEEEEEEESSEE
T ss_pred EEECCCCCcccccccchhhcCceeEeeeeeeeeeccccccchhh-cCceEEecChhhhHhHHhhcCCCcccccccCCCeE
Confidence 999999999999877654333221 111111110 00000 011111100 01 11 1334444433
Q ss_pred EEEEEeCC-----CC-----CC---------CCCchHHHHHH---HHhcCCCCChhhH---HHHHh---hh-cCCCeEec
Q 009785 277 RCLVDIPG-----QK-----VP---------SISNGEMANYL---KTVVAPQIPREIF---HSFVA---AV-DGGNIKTM 327 (526)
Q Consensus 277 ~~~~~~~~-----~~-----~~---------~~~~~~~~~~l---~~~~~~~~~~~l~---~~~~~---~~-~~~~i~~~ 327 (526)
.+...... .. .+ ..+.+++...- .+...+...+.+. ..+.. .+ +......|
T Consensus 301 ~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 380 (497)
T 2bry_A 301 YFVMTAKKQCLLRLGVLRQDLSETDQLLGKANVVPEALQRFARAAADFATHGKLGKLEFAQDARGRPDVAAFDFTSMMRA 380 (497)
T ss_dssp EEEEEECHHHHHHTTSBSSCCSSHHHHTSTTTBCHHHHHHHHHHHHHHHTTTTTCSCCBCBCTTSSBCEEEEECSEEEEE
T ss_pred EEEeccccccccccceeeccccchHhhhhhccCCHHHHHHhhccccccchhhccccchhhhhccCCCCCceeeeEEEEec
Confidence 33332110 00 00 01111111110 0111100000000 00000 01 22344567
Q ss_pred cCCCCCCCCCCCCc-EEEEccCCCcCCCCCchhHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHHHhcchhHH
Q 009785 328 PNRSMPAAPYPTPG-ALLMGDAFNMRHPLTGGGMTVALSDIVILRNLLRHLSNLNDAPALCNYLESFYTLRKPVAST 403 (526)
Q Consensus 328 ~~~~~~~~~~~~gr-v~LiGDAAh~~~P~~G~G~n~al~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~ 403 (526)
+...+.+++|..|| ++|+|||+|..+|..|||+|+||+||.+|+|+|+.+.. +.+..++| .+|++++..
T Consensus 381 ~~~~r~a~~~~~gRr~~l~Gda~~~~~~p~g~G~n~g~~~a~~l~~~l~~~~~---g~~~~~~l----~~r~~~~~~ 450 (497)
T 2bry_A 381 ESSARVQEKHGARLLLGLVGDCLVEPFWPLGTGVARGFLAAFDAAWMVKRWAE---GAGPLEVL----AERESLYQL 450 (497)
T ss_dssp SCSEEEEEETTEEEEEEECGGGTBCCCGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCHHHHH----HHHHHHHTT
T ss_pred chhhHHHHhcCCcccceEeccccccCcCccccchhhHHHHHHHHHHHHHHHhC---CCCccchh----hhHHHHhhh
Confidence 77778889999998 99999999944433999999999999999999998743 22334555 788876654
No 30
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.76 E-value=1.8e-17 Score=165.67 Aligned_cols=288 Identities=11% Similarity=0.091 Sum_probs=143.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccce------------eeCc---chHHHHHHcCCcchhhcc
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGE------------LLQP---GGYLKLIELGLEDCVEQI 124 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~------------~l~~---~~~~~l~~lGl~~~l~~~ 124 (526)
++||+|||||++|+++|+.|+++|++|+|+||.+....+.... .+.. ...+.++.+.....+
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 78 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHV--- 78 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSE---
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCe---
Confidence 4799999999999999999999999999999986543322111 1111 122222222111100
Q ss_pred cceeeeeeEEEECCeeeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeC
Q 009785 125 DAQRVFGYALFKDGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTK 203 (526)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~ 203 (526)
.............. +.... ... .....+..+. .|.+.+.+ +++++.++ |+++..++++ +++.+.
T Consensus 79 --~~~~~~~~~~~~~~----~~~~~--~~~-~~~~~~~~~~-~l~~~l~~--g~~i~~~~~v~~i~~~~~~---~~v~~~ 143 (336)
T 1yvv_A 79 --AEWTPLLYNFHAGR----LSPSP--DEQ-VRWVGKPGMS-AITRAMRG--DMPVSFSCRITEVFRGEEH---WNLLDA 143 (336)
T ss_dssp --EEECCCEEEESSSB----CCCCC--TTS-CEEEESSCTH-HHHHHHHT--TCCEECSCCEEEEEECSSC---EEEEET
T ss_pred --eeccccceeccCcc----cccCC--CCC-ccEEcCccHH-HHHHHHHc--cCcEEecCEEEEEEEeCCE---EEEEeC
Confidence 01111111111111 00000 000 1111222222 23333333 57888885 9999887774 556677
Q ss_pred CCcEEEEEcCeEEEeecCCccccccccCC-------CCCCccceeEEEEeccCCCCCCccEEEecCCCcEEEE------e
Q 009785 204 AGEELTAYAPLTIVCDGCFSNLRRSLCNP-------KVDVPSCFVGLVLENCNLPFENHGHVVLADPSPILFY------P 270 (526)
Q Consensus 204 ~G~~~~i~a~~vV~ADG~~S~vR~~l~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------p 270 (526)
+|+. ..++|+||+|||.+|.+|.....+ ...........+........+.. .++. ..+++.++ |
T Consensus 144 ~g~~-~~~a~~vV~a~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~l~~~~~~p 220 (336)
T 1yvv_A 144 EGQN-HGPFSHVIIATPAPQASTLLAAAPKLASVVAGVKMDPTWAVALAFETPLQTPMQ-GCFV-QDSPLDWLARNRSKP 220 (336)
T ss_dssp TSCE-EEEESEEEECSCHHHHGGGGTTCHHHHHHHTTCCEEEEEEEEEEESSCCSCCCC-EEEE-CSSSEEEEEEGGGST
T ss_pred CCcC-ccccCEEEEcCCHHHHHHhhccCHHHHHHHhhcCccceeEEEEEecCCCCCCCC-eEEe-CCCceeEEEecCcCC
Confidence 7863 345899999999999988653321 11111112111222222222212 2233 33444333 3
Q ss_pred cCCCc-EEEEEEeCC---CCCCCCCchHHHHHHHHhcCCCCChhhHHHHHhhhcCCCeEec----cCCCCCCCCC--CCC
Q 009785 271 ISSNE-VRCLVDIPG---QKVPSISNGEMANYLKTVVAPQIPREIFHSFVAAVDGGNIKTM----PNRSMPAAPY--PTP 340 (526)
Q Consensus 271 ~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~i~~~----~~~~~~~~~~--~~g 340 (526)
...+. ..+++.... ......+.++..+.+.+.+...+...... ........| +......... ..+
T Consensus 221 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~~~~~-----p~~~~~~rw~~a~~~~~~~~~~~~~~~~ 295 (336)
T 1yvv_A 221 ERDDTLDTWILHATSQWSRQNLDASREQVIEHLHGAFAELIDCTMPA-----PVFSLAHRWLYARPAGAHEWGALSDADL 295 (336)
T ss_dssp TCCCSSEEEEEEECHHHHHHTTTSCHHHHHHHHHHHHHTTCSSCCCC-----CSEEEEEEEEEEEESSCCCCSCEEETTT
T ss_pred CCCCCCcEEEEEeCHHHHHHHHhCCHHHHHHHHHHHHHHHhCCCCCC-----CcEEEccccCccCCCCCCCCCeeecCCC
Confidence 33332 345555431 11223445555554444333222211000 000011222 3332222222 348
Q ss_pred cEEEEccCCCcCCCCCchhHHHHHHHHHHHHHHHhhhcC
Q 009785 341 GALLMGDAFNMRHPLTGGGMTVALSDIVILRNLLRHLSN 379 (526)
Q Consensus 341 rv~LiGDAAh~~~P~~G~G~n~al~Da~~La~~L~~~~~ 379 (526)
|++|+|||+|. .|++.|+.|+..||+.|.+..+
T Consensus 296 rl~laGDa~~g------~gv~~a~~sg~~lA~~l~~~~~ 328 (336)
T 1yvv_A 296 GIYVCGDWCLS------GRVEGAWLSGQEAARRLLEHLQ 328 (336)
T ss_dssp TEEECCGGGTT------SSHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEEecCCCC------CCHHHHHHHHHHHHHHHHHHhh
Confidence 99999999963 4999999999999999987543
No 31
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.56 E-value=1.7e-14 Score=157.75 Aligned_cols=159 Identities=12% Similarity=0.083 Sum_probs=95.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCC---cccceeeCcc------------------hHHHHHHcCC
Q 009785 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPD---RIVGELLQPG------------------GYLKLIELGL 117 (526)
Q Consensus 59 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~---~~~g~~l~~~------------------~~~~l~~lGl 117 (526)
..+||+|||||++|+++|+.|+++|++|+|+||+..... ...+..+.+. +.+.+++++.
T Consensus 271 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 350 (676)
T 3ps9_A 271 SKREAAIIGGGIASALLSLALLRRGWQVTLYCADEAPALGASGNRQGALYPLLSKHDEALNRFFSNAFTFARRFYDQLPV 350 (676)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSCSTTCCSCEEECCCCCSSCHHHHHHHHHHHHHHHHHHHHCCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCcccccCccCCCceecCcCCCCccHHHHHHHHHHHHHHHHHHHCCC
Confidence 458999999999999999999999999999999754321 1112222221 2233344432
Q ss_pred cchhhcccceeeeeeEEEECC-------------------------eeeeecCCCcCCC---CCcccceeechHHHHHHH
Q 009785 118 EDCVEQIDAQRVFGYALFKDG-------------------------NRTQISYPLEKFH---SDVAGRGFHNGRFVQRLR 169 (526)
Q Consensus 118 ~~~l~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~L~ 169 (526)
..... ..+....... .......+..... ..+.+..++...+...|.
T Consensus 351 ~~~~~------~~g~l~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~~~l~~~~gg~~~p~~g~v~p~~l~~aL~ 424 (676)
T 3ps9_A 351 KFDHD------WCGVTQLGWDEKSQHKIAQMLSMDLPAELAVAVEANAVEQITGVATNCSGITYPQGGWLCPAELTRNVL 424 (676)
T ss_dssp CCCEE------CCCEEEECCSHHHHHHHHHHHTSCCCTTTCEEECHHHHHHHHSSCCSSCEEEETTCEEECHHHHHHHHH
T ss_pred CcCcC------cCCeeeecCCHHHHHHHHHHHhcCCcHHHhhhCCHHHHHHhhCCCccCCcEEecCCeeeCHHHHHHHHH
Confidence 11100 0111110000 0000000000000 011233456678999999
Q ss_pred HHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEeecCCcc-ccccc
Q 009785 170 EKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFSN-LRRSL 229 (526)
Q Consensus 170 ~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~ADG~~S~-vR~~l 229 (526)
+.+++. ++++++++ |+++..++++ |.+.+.+|.+ ++||.||.|+|.+|. +.+..
T Consensus 425 ~~a~~~-Gv~i~~~t~V~~l~~~~~~---v~V~t~~G~~--i~Ad~VVlAtG~~s~~l~~~~ 480 (676)
T 3ps9_A 425 ELAQQQ-GLQIYYQYQLQNFSRKDDC---WLLNFAGDQQ--ATHSVVVLANGHQISRFSQTS 480 (676)
T ss_dssp HHHHHT-TCEEEESCCEEEEEEETTE---EEEEETTSCE--EEESEEEECCGGGGGCSTTTT
T ss_pred HHHHhC-CCEEEeCCeeeEEEEeCCe---EEEEECCCCE--EECCEEEECCCcchhcccccc
Confidence 999887 68898885 9999988885 4566667653 779999999999985 44433
No 32
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.56 E-value=1.1e-14 Score=147.92 Aligned_cols=195 Identities=13% Similarity=0.057 Sum_probs=107.0
Q ss_pred ceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEeecCCcc-ccccccCCCC
Q 009785 157 RGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFSN-LRRSLCNPKV 234 (526)
Q Consensus 157 ~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~ADG~~S~-vR~~l~~~~~ 234 (526)
..++...+.+.|.+.+.+. +++++.++ |+++..+++.+ + +.+.+| +++||.||.|+|.+|. +.+.++...+
T Consensus 159 ~~~~~~~~~~~l~~~~~~~-g~~i~~~~~v~~i~~~~~~~-~--v~~~~g---~~~a~~vV~A~G~~s~~l~~~~~~~~~ 231 (382)
T 1ryi_A 159 VHVEPYFVCKAYVKAAKML-GAEIFEHTPVLHVERDGEAL-F--IKTPSG---DVWANHVVVASGVWSGMFFKQLGLNNA 231 (382)
T ss_dssp CBCCHHHHHHHHHHHHHHT-TCEEETTCCCCEEECSSSSE-E--EEETTE---EEEEEEEEECCGGGTHHHHHHTTCCCC
T ss_pred eEEcHHHHHHHHHHHHHHC-CCEEEcCCcEEEEEEECCEE-E--EEcCCc---eEEcCEEEECCChhHHHHHHhcCCCCc
Confidence 3456678999999999887 78998884 99998777755 3 345555 4789999999999996 7777654322
Q ss_pred CCccceeEEEEe-ccCCCCCCccEEEecCCCcEEEEecCCCcEEEEEEeCCCCCCCCCchHHHHHHHHhcCCCCChhhHH
Q 009785 235 DVPSCFVGLVLE-NCNLPFENHGHVVLADPSPILFYPISSNEVRCLVDIPGQKVPSISNGEMANYLKTVVAPQIPREIFH 313 (526)
Q Consensus 235 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~ 313 (526)
-. ...+..+. ....+.. ...++.+ ..+++|..++...+...............+..+.+.+.+...+|. +..
T Consensus 232 ~~--~~~g~~~~~~~~~~~~--~~~~~~~--~~~~~p~~~g~~~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~-l~~ 304 (382)
T 1ryi_A 232 FL--PVKGECLSVWNDDIPL--TKTLYHD--HCYIVPRKSGRLVVGATMKPGDWSETPDLGGLESVMKKAKTMLPA-IQN 304 (382)
T ss_dssp CE--EEEEEEEEEECCSSCC--CSEEEET--TEEEEECTTSEEEEECCCEETCCCCSCCHHHHHHHHHHHHHHCGG-GGG
T ss_pred ee--ccceEEEEECCCCCCc--cceEEcC--CEEEEEcCCCeEEEeecccccCCCCCCCHHHHHHHHHHHHHhCCC-cCC
Confidence 22 22333322 1111111 1123332 567778766643333221111111111222222333222211221 110
Q ss_pred HHHhhhcCCCeEeccCCCCCCCCCCCCcEEEEccCC-----CcCCCCCchhHHHHHHHHHHHHHHHhh
Q 009785 314 SFVAAVDGGNIKTMPNRSMPAAPYPTPGALLMGDAF-----NMRHPLTGGGMTVALSDIVILRNLLRH 376 (526)
Q Consensus 314 ~~~~~~~~~~i~~~~~~~~~~~~~~~grv~LiGDAA-----h~~~P~~G~G~n~al~Da~~La~~L~~ 376 (526)
......|.-. ..+..++..++|++. ....+++|.|+..|..-+..+++.+..
T Consensus 305 -------~~~~~~w~g~----~~~t~d~~p~ig~~~~~~~l~~~~G~~g~G~~~a~~~g~~la~~i~~ 361 (382)
T 1ryi_A 305 -------MKVDRFWAGL----RPGTKDGKPYIGRHPEDSRILFAAGHFRNGILLAPATGALISDLIMN 361 (382)
T ss_dssp -------SEEEEEEEEE----EEECSSSCCEEEEETTEEEEEEEECCSSCTTTTHHHHHHHHHHHHTT
T ss_pred -------CceeeEEEEe----cccCCCCCcEeccCCCcCCEEEEEcCCcchHHHhHHHHHHHHHHHhC
Confidence 0011122110 112335566778763 345678999999999999999998874
No 33
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.53 E-value=1.1e-13 Score=145.85 Aligned_cols=213 Identities=13% Similarity=0.055 Sum_probs=110.3
Q ss_pred eeechHHHHHHHHHHHcCCCeEEEec-eEEEEEeeCCeEEEEEEEe-CCCcEEEEEcCeEEEeecCCcc-cccc-ccCCC
Q 009785 158 GFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKT-KAGEELTAYAPLTIVCDGCFSN-LRRS-LCNPK 233 (526)
Q Consensus 158 ~~~~~~l~~~L~~~a~~~~~v~i~~~-~v~~l~~~~~~v~gv~v~~-~~G~~~~i~a~~vV~ADG~~S~-vR~~-l~~~~ 233 (526)
.++...+...|.+.+.+. |++++.+ +|+++..++ ++.+|++.+ .+|+..+++||.||.|+|.+|. +++. ++...
T Consensus 145 ~v~~~~l~~~l~~~a~~~-Gv~i~~~~~V~~l~~~~-~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~l~~~~l~~~~ 222 (501)
T 2qcu_A 145 WVDDARLVLANAQMVVRK-GGEVLTRTRATSARREN-GLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDGMHLPS 222 (501)
T ss_dssp EECHHHHHHHHHHHHHHT-TCEEECSEEEEEEEEET-TEEEEEEEETTTCCEEEEEESCEEECCGGGHHHHHHHHTCCCC
T ss_pred EEcHHHHHHHHHHHHHHc-CCEEEcCcEEEEEEEeC-CEEEEEEEECCCCCEEEEECCEEEECCChhHHHHHHHhccCCc
Confidence 356778999999999887 7888877 599998776 455677665 4676667899999999999995 4553 44321
Q ss_pred CCCccceeEEEEe-ccCCCCCCccEEEec-CCCcEEEEecCCCcEEEEEE---eCCC-CCCCCCchHHHHHHHHhcCCCC
Q 009785 234 VDVPSCFVGLVLE-NCNLPFENHGHVVLA-DPSPILFYPISSNEVRCLVD---IPGQ-KVPSISNGEMANYLKTVVAPQI 307 (526)
Q Consensus 234 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~l~~~~~~~~ 307 (526)
........|..+. +...+. ....++-. ++..++++|..++...+... ...+ ..+..+.++. +++.+.+...+
T Consensus 223 ~~~i~p~rG~~~~~~~~~~~-~~~~~~~~~dg~~~~~~P~~~g~~~iG~t~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~ 300 (501)
T 2qcu_A 223 PYGIRLIKGSHIVVPRVHTQ-KQAYILQNEDKRIVFVIPWMDEFSIIGTTDVEYKGDPKAVKIEESEI-NYLLNVYNTHF 300 (501)
T ss_dssp SSCBCCEEEEEEEEECSSSC-SCEEEEECTTSCEEEEEEETTTEEEEECCCEECCSCGGGCCCCHHHH-HHHHHHHHHHB
T ss_pred ccccccceeEEEEECCCCCC-ceEEEeecCCCCEEEEEEcCCCcEEEcCCCCCCCCCcCCCCCCHHHH-HHHHHHHHHhc
Confidence 1111122232222 222221 22222222 34467788987663322221 1101 1112233332 23322222112
Q ss_pred ChhhHHHHHhhh-cCCCeEeccCCCCC-CCCCCCCcEEE--EccCCCcCCCCCchhHHHHHHHHHHHHHHHhh
Q 009785 308 PREIFHSFVAAV-DGGNIKTMPNRSMP-AAPYPTPGALL--MGDAFNMRHPLTGGGMTVALSDIVILRNLLRH 376 (526)
Q Consensus 308 ~~~l~~~~~~~~-~~~~i~~~~~~~~~-~~~~~~grv~L--iGDAAh~~~P~~G~G~n~al~Da~~La~~L~~ 376 (526)
|..+... +.. ....++.......+ ......+.++. .+|..|.+...+|.|++++-.=|..+++.+..
T Consensus 301 p~~l~~~--~v~~~~aG~Rp~~~d~~p~~~~~~~~~~i~~~~~~~~~gl~~i~Gg~~t~~~~~Ae~~~~~~~~ 371 (501)
T 2qcu_A 301 KKQLSRD--DIVWTYSGVRPLCDDESDSPQAITRDYTLDIHDENGKAPLLSVFGGKLTTYRKLAEHALEKLTP 371 (501)
T ss_dssp SSCCCGG--GCCEEEEEEECCBCCCCSSGGGSCCCCEEEEEEETTEEEEEEEECCCGGGHHHHHHHHHHHHGG
T ss_pred CCCCCcc--cEEEEEEEEeeecCCCCCccccCcCceEEEecccCCCCCeEEEeCccccchHHHHHHHHHHHHH
Confidence 2111100 000 00011211111111 11223355666 57777777778888888887777777776654
No 34
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.50 E-value=6.7e-13 Score=134.87 Aligned_cols=198 Identities=12% Similarity=0.032 Sum_probs=103.9
Q ss_pred eeechHHHHHHHHHHHcCCCeEEEec-eEEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEeecCCc-cccccccCC--C
Q 009785 158 GFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFS-NLRRSLCNP--K 233 (526)
Q Consensus 158 ~~~~~~l~~~L~~~a~~~~~v~i~~~-~v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~ADG~~S-~vR~~l~~~--~ 233 (526)
.++...+.+.|.+.+++. +++++.+ +|+++..+++.+.+|+ +.+| +++||.||.|+|.+| .+.+.++.. .
T Consensus 145 ~~~~~~l~~~l~~~~~~~-Gv~i~~~~~v~~i~~~~~~v~gv~--~~~g---~i~a~~VV~A~G~~s~~l~~~~g~~~~~ 218 (382)
T 1y56_B 145 KADPFEATTAFAVKAKEY-GAKLLEYTEVKGFLIENNEIKGVK--TNKG---IIKTGIVVNATNAWANLINAMAGIKTKI 218 (382)
T ss_dssp EECHHHHHHHHHHHHHHT-TCEEECSCCEEEEEESSSBEEEEE--ETTE---EEECSEEEECCGGGHHHHHHHHTCCSCC
T ss_pred eECHHHHHHHHHHHHHHC-CCEEECCceEEEEEEECCEEEEEE--ECCc---EEECCEEEECcchhHHHHHHHcCCCcCc
Confidence 456778899999999887 7899887 4999998777665554 4556 478999999999998 566666544 2
Q ss_pred CCCccceeEEEEeccCCCCCCccEEEecCC-CcEEEEecCCCcEEEEE-EeC-CCCCCCCCchHHHHHHHHhcCCCCChh
Q 009785 234 VDVPSCFVGLVLENCNLPFENHGHVVLADP-SPILFYPISSNEVRCLV-DIP-GQKVPSISNGEMANYLKTVVAPQIPRE 310 (526)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~ 310 (526)
+.. ...+.+......+.......++... ..+++.|..++ ..+.. ... ..........+..+.+.+.+...+| .
T Consensus 219 ~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~y~~p~~~g-~~iG~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p-~ 294 (382)
T 1y56_B 219 PIE--PYKHQAVITQPIKRGTINPMVISFKYGHAYLTQTFHG-GIIGGIGYEIGPTYDLTPTYEFLREVSYYFTKIIP-A 294 (382)
T ss_dssp CCE--EEEEEEEEECCCSTTSSCSEEEESTTTTEEEECCSSS-CCEEECSCCBSSCCCCCCCHHHHHHHHHHHHHHCG-G
T ss_pred CCC--eeEeEEEEEccCCcccCCCeEEecCCCeEEEEEeCCe-EEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHhCC-C
Confidence 222 2223322211111111112333333 46677787665 33332 111 1111111122222222222211122 1
Q ss_pred hHHHHHhhhcCCCeEeccCCCCCCCCCCCCcEEEEccCC-----CcCCCCCchhHHHHHHHHHHHHHHHhh
Q 009785 311 IFHSFVAAVDGGNIKTMPNRSMPAAPYPTPGALLMGDAF-----NMRHPLTGGGMTVALSDIVILRNLLRH 376 (526)
Q Consensus 311 l~~~~~~~~~~~~i~~~~~~~~~~~~~~~grv~LiGDAA-----h~~~P~~G~G~n~al~Da~~La~~L~~ 376 (526)
+.. ......|.-. + ....++..++|... ....-++|.|+..+..-+..+++.+..
T Consensus 295 l~~-------~~~~~~~~g~-r---~~t~d~~p~ig~~~~~~~~~~~~G~~g~G~~~a~~~g~~la~~i~~ 354 (382)
T 1y56_B 295 LKN-------LLILRTWAGY-Y---AKTPDSNPAIGRIEELNDYYIAAGFSGHGFMMAPAVGEMVAELITK 354 (382)
T ss_dssp GGG-------SEEEEEEEEE-E---EECTTSCCEEEEESSSBTEEEEECCTTCHHHHHHHHHHHHHHHHHH
T ss_pred cCC-------CCceEEEEec-c---ccCCCCCcEeccCCCCCCEEEEEecCcchHhhhHHHHHHHHHHHhC
Confidence 110 0011112110 0 01123445566543 222456788999999999999988874
No 35
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.50 E-value=2.8e-13 Score=133.57 Aligned_cols=140 Identities=24% Similarity=0.267 Sum_probs=99.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhC--CCeEEEEecCCCCCCcc-------cceeeCcchHHHHHHcCCcchhhcccceeee
Q 009785 60 DADVIVVGAGVAGAALANTLAKD--GRRVHVIERDLSEPDRI-------VGELLQPGGYLKLIELGLEDCVEQIDAQRVF 130 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~--G~~V~l~Er~~~~~~~~-------~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~ 130 (526)
++||+|||||++|+++|+.|+++ |++|+|+|+.+...... ....+.+...+.|+++|+.-.. ..
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~-------~G 151 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYED-------EG 151 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCEE-------CS
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCcccc-------cC
Confidence 58999999999999999999997 99999999986543211 1122345566777777764110 00
Q ss_pred eeEEEECCeeeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeC-----------------
Q 009785 131 GYALFKDGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEK----------------- 192 (526)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~----------------- 192 (526)
++. ...+...+.+.|.+.+.+.+++++++++ ++++..++
T Consensus 152 ~~~-----------------------~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~ 208 (344)
T 3jsk_A 152 DYV-----------------------VVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDE 208 (344)
T ss_dssp SEE-----------------------EESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------
T ss_pred CeE-----------------------EEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccC
Confidence 000 0113456778999999887799999985 89988655
Q ss_pred C--eEEEEEEEe----CCC------cEEEEEcCeEEEeecCCccccccc
Q 009785 193 G--TIKGVQYKT----KAG------EELTAYAPLTIVCDGCFSNLRRSL 229 (526)
Q Consensus 193 ~--~v~gv~v~~----~~G------~~~~i~a~~vV~ADG~~S~vR~~l 229 (526)
+ .+.||.+.. .+| +..+++|++||+|||..|++++.+
T Consensus 209 g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~Ak~VV~ATG~~s~v~~~~ 257 (344)
T 3jsk_A 209 AKVRIAGVVTNWTLVSMHHDDQSAMDPNTINAPVIISTTGHDGPFGAFS 257 (344)
T ss_dssp CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEECSEEEECCCSSSSSSCHH
T ss_pred CCceEeEEEeeeeeeeccCCcccccCceEEEcCEEEECCCCCchhhHHH
Confidence 3 778887752 233 346789999999999999977655
No 36
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.50 E-value=7.7e-13 Score=141.05 Aligned_cols=172 Identities=19% Similarity=0.243 Sum_probs=100.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcc-cceeeCcchHHHHHHcCCc---chhhcc------c----
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRI-VGELLQPGGYLKLIELGLE---DCVEQI------D---- 125 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~-~g~~l~~~~~~~l~~lGl~---~~l~~~------~---- 125 (526)
++||+|||||++|+++|+.|+++|++|+|+||+....... ....+-..+.+.++...+. +.+.+. .
T Consensus 18 ~~DVvVIGgGi~Gl~~A~~La~~G~~V~LlEk~d~~~GtS~~ss~lihgG~ryl~~~~~~l~~e~~~e~~~l~~~ap~l~ 97 (561)
T 3da1_A 18 QLDLLVIGGGITGAGIALDAQVRGIQTGLVEMNDFASGTSSRSTKLVHGGLRYLKQFEIKLVAEVGKERAIVYENAPHVT 97 (561)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSSTTCSGGGSSCCEECC---------------CHHHHHHHHHHCTTTC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEECCCCCCCcccCCcCccccchHHHHhcCHHHHHHHHHHHHHHHHhCchhc
Confidence 5999999999999999999999999999999985432211 1222333344444332211 000000 0
Q ss_pred c-----eeee------------eeEEEEC--Ce------------eeeecCCCcCCCCC-----cccceeechHHHHHHH
Q 009785 126 A-----QRVF------------GYALFKD--GN------------RTQISYPLEKFHSD-----VAGRGFHNGRFVQRLR 169 (526)
Q Consensus 126 ~-----~~~~------------~~~~~~~--~~------------~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~L~ 169 (526)
. .+.. +..++.. +. ......|.-..... .....++...+...|.
T Consensus 98 ~~~~~~~p~~~~~~~~~~~~~~g~~~~d~l~~~~~~~~~~~l~~~~~~~~~P~l~~~~~~gg~~~~dg~vd~~~l~~~L~ 177 (561)
T 3da1_A 98 TPEWMLLPIFKDGTFGKFSTSLGLKVYDYLADVRKDERRYMLNEKQTLEKEPLLRKENLKGGGIYVEYRTDDARLTLEIM 177 (561)
T ss_dssp EEEEEEEEECC---------------------------CEEECHHHHHHHCTTSCCTTCCEEEEEEEEECCHHHHHHHHH
T ss_pred cccceeEeecCCccHHHHHHHhHHHHHHHhhcccCCCCcEEECHHHHHHhCccCChhhceeEEEecCceEcHHHHHHHHH
Confidence 0 0000 0000000 00 00000110000000 0112456678999999
Q ss_pred HHHHcCCCeEEEec-eEEEEEeeCCeEEEEEEEe-CCCcEEEEEcCeEEEeecCCc-cccccccCC
Q 009785 170 EKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKT-KAGEELTAYAPLTIVCDGCFS-NLRRSLCNP 232 (526)
Q Consensus 170 ~~a~~~~~v~i~~~-~v~~l~~~~~~v~gv~v~~-~~G~~~~i~a~~vV~ADG~~S-~vR~~l~~~ 232 (526)
+.+.+. |++++.+ +|+++..+++++.+|++.+ .+|+..+++||.||.|+|.+| .+++.++..
T Consensus 178 ~~a~~~-G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~l~~~~g~~ 242 (561)
T 3da1_A 178 KEAVAR-GAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLREKDRSK 242 (561)
T ss_dssp HHHHHT-TCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGHHHHHHTTTCC
T ss_pred HHHHHc-CCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcchHHHHHhcCCC
Confidence 999887 7888877 5999999888888888876 356667799999999999999 678877654
No 37
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.48 E-value=1.9e-12 Score=130.46 Aligned_cols=72 Identities=14% Similarity=0.062 Sum_probs=55.4
Q ss_pred eeechHHHHHHHHHHHcCCCeEEEec-eEEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEeecCCc-cccccc-cCC
Q 009785 158 GFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFS-NLRRSL-CNP 232 (526)
Q Consensus 158 ~~~~~~l~~~L~~~a~~~~~v~i~~~-~v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~ADG~~S-~vR~~l-~~~ 232 (526)
.++...+.+.|.+.+++. +++++.+ +|+++..+++++ +.+...+|+..+++||.||.|+|.+| .+.+.+ +.+
T Consensus 146 ~~~~~~~~~~l~~~~~~~-Gv~i~~~~~v~~i~~~~~~~--~~v~~~~g~~~~~~a~~VV~A~G~~s~~l~~~~~g~~ 220 (369)
T 3dme_A 146 IVDSHALMLAYQGDAESD-GAQLVFHTPLIAGRVRPEGG--FELDFGGAEPMTLSCRVLINAAGLHAPGLARRIEGIP 220 (369)
T ss_dssp EECHHHHHHHHHHHHHHT-TCEEECSCCEEEEEECTTSS--EEEEECTTSCEEEEEEEEEECCGGGHHHHHHTEETSC
T ss_pred EECHHHHHHHHHHHHHHC-CCEEECCCEEEEEEEcCCce--EEEEECCCceeEEEeCEEEECCCcchHHHHHHhcCCC
Confidence 456678999999999887 7899877 599999876642 23456677555688999999999999 566666 653
No 38
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.47 E-value=3.2e-13 Score=138.29 Aligned_cols=116 Identities=17% Similarity=0.093 Sum_probs=72.4
Q ss_pred eeechHHHHHHHHHHHcCCCeEEEec-eEEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEeecCCc-cccccccCCCCC
Q 009785 158 GFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFS-NLRRSLCNPKVD 235 (526)
Q Consensus 158 ~~~~~~l~~~L~~~a~~~~~v~i~~~-~v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~ADG~~S-~vR~~l~~~~~~ 235 (526)
.++...+.+.|.+.+++. +++++.+ +|+++..+++++.+|+ ..+| +++||.||.|+|.+| .+++.++...+.
T Consensus 170 ~~~~~~~~~~l~~~~~~~-g~~i~~~~~v~~i~~~~~~~~~v~--~~~g---~~~a~~vV~a~G~~s~~l~~~~g~~~~~ 243 (405)
T 2gag_B 170 IAKHDHVAWAFARKANEM-GVDIIQNCEVTGFIKDGEKVTGVK--TTRG---TIHAGKVALAGAGHSSVLAEMAGFELPI 243 (405)
T ss_dssp BCCHHHHHHHHHHHHHHT-TCEEECSCCEEEEEESSSBEEEEE--ETTC---CEEEEEEEECCGGGHHHHHHHHTCCCCE
T ss_pred cCCHHHHHHHHHHHHHHC-CCEEEcCCeEEEEEEeCCEEEEEE--eCCc---eEECCEEEECCchhHHHHHHHcCCCCCc
Confidence 345567889999999887 7899887 4999988777665554 4556 377999999999998 688877765432
Q ss_pred CccceeEEEEeccCCCCCCccEEEecCCCcEEEEecCCCcEEEEEEe
Q 009785 236 VPSCFVGLVLENCNLPFENHGHVVLADPSPILFYPISSNEVRCLVDI 282 (526)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 282 (526)
.+ ..+.+......+.. ...++......+++.|..++...+....
T Consensus 244 ~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~y~~p~~~g~~~ig~~~ 287 (405)
T 2gag_B 244 QS--HPLQALVSELFEPV-HPTVVMSNHIHVYVSQAHKGELVMGAGI 287 (405)
T ss_dssp EE--EEEEEEEEEEBCSC-CCSEEEETTTTEEEEECTTSEEEEEEEE
T ss_pred cc--cceeEEEecCCccc-cCceEEeCCCcEEEEEcCCCcEEEEecc
Confidence 22 22222211111111 1122333445677778777655554443
No 39
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.47 E-value=7.4e-13 Score=128.96 Aligned_cols=140 Identities=23% Similarity=0.250 Sum_probs=97.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHhC-CCeEEEEecCCCCCCcc--cc-----eeeCcchHHHHHHcCCcchhhcccceeeee
Q 009785 60 DADVIVVGAGVAGAALANTLAKD-GRRVHVIERDLSEPDRI--VG-----ELLQPGGYLKLIELGLEDCVEQIDAQRVFG 131 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~-G~~V~l~Er~~~~~~~~--~g-----~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~ 131 (526)
++||+|||||++|+++|+.|+++ |.+|+|+||.+...... .+ ..+.....+.|+++|+.-..
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~---------- 108 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDE---------- 108 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEE----------
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCccc----------
Confidence 58999999999999999999997 99999999986543211 11 11223344555555542100
Q ss_pred eEEEECCeeeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeC-------
Q 009785 132 YALFKDGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTK------- 203 (526)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~------- 203 (526)
.+. .....+...+...|.+.+.+..+++++.++ |+++..+++++.+|.+...
T Consensus 109 -----~~~---------------~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~ 168 (284)
T 1rp0_A 109 -----QDT---------------YVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHH 168 (284)
T ss_dssp -----CSS---------------EEEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTT
T ss_pred -----CCC---------------EEEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccC
Confidence 000 000114566788888888776689999985 9999988888878877531
Q ss_pred C---CcEEEEEcCeEEEeecCCccccccc
Q 009785 204 A---GEELTAYAPLTIVCDGCFSNLRRSL 229 (526)
Q Consensus 204 ~---G~~~~i~a~~vV~ADG~~S~vR~~l 229 (526)
+ |+..+++||.||.|+|.+|.++...
T Consensus 169 ~g~~g~~~~i~ad~VV~AtG~~s~~~~~~ 197 (284)
T 1rp0_A 169 TQSCMDPNVMEAKIVVSSCGHDGPFGATG 197 (284)
T ss_dssp TSSCCCCEEEEEEEEEECCCSSSTTTTHH
T ss_pred ccccCceEEEECCEEEECCCCchHHHHHH
Confidence 2 3445789999999999999887654
No 40
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.47 E-value=1.7e-13 Score=150.04 Aligned_cols=68 Identities=9% Similarity=-0.022 Sum_probs=50.2
Q ss_pred ceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEeecCCcc-ccccc
Q 009785 157 RGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFSN-LRRSL 229 (526)
Q Consensus 157 ~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~ADG~~S~-vR~~l 229 (526)
..++...+.+.|.+.+++. |++++.++ |++++.++++ +.+.+.+|. .+++||.||.|+|.+|. +.+.+
T Consensus 407 g~v~p~~l~~aL~~~a~~~-Gv~i~~~t~V~~l~~~~~~---v~V~t~~G~-~~i~Ad~VVlAtG~~s~~l~~~~ 476 (689)
T 3pvc_A 407 GWLCPSDLTHALMMLAQQN-GMTCHYQHELQRLKRIDSQ---WQLTFGQSQ-AAKHHATVILATGHRLPEWEQTH 476 (689)
T ss_dssp EEECHHHHHHHHHHHHHHT-TCEEEESCCEEEEEECSSS---EEEEEC-CC-CCEEESEEEECCGGGTTCSTTTT
T ss_pred eEECHHHHHHHHHHHHHhC-CCEEEeCCeEeEEEEeCCe---EEEEeCCCc-EEEECCEEEECCCcchhcccccc
Confidence 3456678999999999887 68888885 9999987775 345566664 13679999999999985 33333
No 41
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.45 E-value=1.3e-12 Score=125.34 Aligned_cols=38 Identities=24% Similarity=0.560 Sum_probs=35.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPD 97 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~ 97 (526)
++||+||||||+||++|+.|+++|++|+|+||++.+..
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG 39 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGG 39 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCC
Confidence 58999999999999999999999999999999876543
No 42
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.44 E-value=2.4e-13 Score=145.53 Aligned_cols=165 Identities=18% Similarity=0.185 Sum_probs=107.2
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcc--cceeeCcchHHHHHHcCCcchhhccccee-------
Q 009785 58 PFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRI--VGELLQPGGYLKLIELGLEDCVEQIDAQR------- 128 (526)
Q Consensus 58 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~--~g~~l~~~~~~~l~~lGl~~~l~~~~~~~------- 128 (526)
+.++||||||||++|+++|+.|+++|.+|+|+||.+...... .+..++.......+++|+.+.........
T Consensus 119 ~~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~ 198 (566)
T 1qo8_A 119 SETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQ 198 (566)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCC
Confidence 356899999999999999999999999999999987654322 23334444444555555543322110000
Q ss_pred ---------------------eeeeEEEECCeeeeecC-CCcCCCC--CcccceeechHHHHHHHHHHHcCCCeEEEece
Q 009785 129 ---------------------VFGYALFKDGNRTQISY-PLEKFHS--DVAGRGFHNGRFVQRLREKAASLPNVRLEQGT 184 (526)
Q Consensus 129 ---------------------~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~ 184 (526)
..+..+. .... ....... .+.+..+....+.+.|.+.+.+. +++++.++
T Consensus 199 ~~~~~~~~~~~~~~~~i~~l~~~Gv~~~------~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~-gv~i~~~~ 271 (566)
T 1qo8_A 199 NDIKLVTILAEQSADGVQWLESLGANLD------DLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQ-GIDTRLNS 271 (566)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTCCCC------EEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHT-TCCEECSE
T ss_pred CCHHHHHHHHhccHHHHHHHHhcCCccc------cccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhc-CCEEEeCC
Confidence 0000000 0000 0000000 00011133567889999999887 79999885
Q ss_pred -EEEEEeeC-CeEEEEEEEeCCCcEEEEEcCeEEEeecCCccccccc
Q 009785 185 -VTSLLEEK-GTIKGVQYKTKAGEELTAYAPLTIVCDGCFSNLRRSL 229 (526)
Q Consensus 185 -v~~l~~~~-~~v~gv~v~~~~G~~~~i~a~~vV~ADG~~S~vR~~l 229 (526)
|++++.++ ++|.+|++.+.+|+..+++||.||.|+|.+|..|+.+
T Consensus 272 ~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~~~~~~ 318 (566)
T 1qo8_A 272 RVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGMNKEMI 318 (566)
T ss_dssp EEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTTCHHHH
T ss_pred EEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcccCHHHH
Confidence 99999877 8888999887788767789999999999999886655
No 43
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.42 E-value=2.2e-12 Score=130.75 Aligned_cols=69 Identities=9% Similarity=0.057 Sum_probs=54.0
Q ss_pred ceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEeecCCc-cccccccCC
Q 009785 157 RGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFS-NLRRSLCNP 232 (526)
Q Consensus 157 ~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~ADG~~S-~vR~~l~~~ 232 (526)
..++...+...|.+.+++. +++++.++ |+++..+++. +.+.+.+| +++||.||.|+|.+| .+.+.++..
T Consensus 149 ~~~~~~~~~~~l~~~a~~~-Gv~i~~~~~V~~i~~~~~~---~~V~t~~g---~i~a~~VV~A~G~~s~~l~~~~g~~ 219 (381)
T 3nyc_A 149 ADIDTDALHQGYLRGIRRN-QGQVLCNHEALEIRRVDGA---WEVRCDAG---SYRAAVLVNAAGAWCDAIAGLAGVR 219 (381)
T ss_dssp EEECHHHHHHHHHHHHHHT-TCEEESSCCCCEEEEETTE---EEEECSSE---EEEESEEEECCGGGHHHHHHHHTCC
T ss_pred ceECHHHHHHHHHHHHHHC-CCEEEcCCEEEEEEEeCCe---EEEEeCCC---EEEcCEEEECCChhHHHHHHHhCCC
Confidence 3456678999999999988 78998874 9999988774 44556666 478999999999999 466666653
No 44
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.42 E-value=1.5e-12 Score=139.50 Aligned_cols=165 Identities=21% Similarity=0.200 Sum_probs=103.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcc--cceeeCcchHHHHHHcCCcchhhccccee--------
Q 009785 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRI--VGELLQPGGYLKLIELGLEDCVEQIDAQR-------- 128 (526)
Q Consensus 59 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~--~g~~l~~~~~~~l~~lGl~~~l~~~~~~~-------- 128 (526)
.++||||||||++|+++|+.|+++|.+|+|+||.+...... .+..++.......+++|+.+.........
T Consensus 125 ~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~ 204 (571)
T 1y0p_A 125 DTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNIN 204 (571)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCCC
Confidence 36899999999999999999999999999999987654321 22233333334455566543322110000
Q ss_pred --------------------eeeeEEEECCeeeeecCCCcCCCC--CcccceeechHHHHHHHHHHHcCCCeEEEece-E
Q 009785 129 --------------------VFGYALFKDGNRTQISYPLEKFHS--DVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-V 185 (526)
Q Consensus 129 --------------------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v 185 (526)
..+..+. . . .......... .+.+.......+.+.|.+.+.+. +++++.++ |
T Consensus 205 ~~~~~~~~~~~~~~~~~~l~~~Gv~~~---~-~-~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~-gv~i~~~~~v 278 (571)
T 1y0p_A 205 DPALVKVLSSHSKDSVDWMTAMGADLT---D-V-GMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKR-NIDLRMNTRG 278 (571)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCC---E-E-ECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHT-TCEEESSEEE
T ss_pred CHHHHHHHHHccHHHHHHHHhcCCCCc---c-C-cccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhc-CCEEEeCCEe
Confidence 0000000 0 0 0000000000 00000022357888999999887 79999885 9
Q ss_pred EEEEeeC-CeEEEEEEEeCCCcEEEEEcCeEEEeecCCccccccc
Q 009785 186 TSLLEEK-GTIKGVQYKTKAGEELTAYAPLTIVCDGCFSNLRRSL 229 (526)
Q Consensus 186 ~~l~~~~-~~v~gv~v~~~~G~~~~i~a~~vV~ADG~~S~vR~~l 229 (526)
+++..++ ++|.+|++.+.+|+..+++||.||.|+|.+|..++.+
T Consensus 279 ~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~n~~~~ 323 (571)
T 1y0p_A 279 IEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFAKNNERV 323 (571)
T ss_dssp EEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCTTCHHHH
T ss_pred eEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCcccCHHHH
Confidence 9999876 8888898887678767789999999999999865433
No 45
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.41 E-value=4.1e-12 Score=129.27 Aligned_cols=66 Identities=20% Similarity=0.209 Sum_probs=50.2
Q ss_pred eeechHHHHHHHHHHHcCCCeEEEec-eEEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEeecCCcc-cccccc
Q 009785 158 GFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFSN-LRRSLC 230 (526)
Q Consensus 158 ~~~~~~l~~~L~~~a~~~~~v~i~~~-~v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~ADG~~S~-vR~~l~ 230 (526)
.++...+.+.|.+.+++. +++++.+ +|+++..+++. +.+.+.+| +++||.||.|+|.+|. +.+.++
T Consensus 146 ~~~~~~~~~~l~~~~~~~-Gv~i~~~~~v~~i~~~~~~---~~v~~~~g---~~~a~~vV~A~G~~~~~l~~~~g 213 (389)
T 2gf3_A 146 VLFSENCIRAYRELAEAR-GAKVLTHTRVEDFDISPDS---VKIETANG---SYTADKLIVSMGAWNSKLLSKLN 213 (389)
T ss_dssp EEEHHHHHHHHHHHHHHT-TCEEECSCCEEEEEECSSC---EEEEETTE---EEEEEEEEECCGGGHHHHGGGGT
T ss_pred EEeHHHHHHHHHHHHHHC-CCEEEcCcEEEEEEecCCe---EEEEeCCC---EEEeCEEEEecCccHHHHhhhhc
Confidence 456678899999999888 7899887 59999877664 34455555 4789999999999984 445554
No 46
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.41 E-value=9.8e-12 Score=126.96 Aligned_cols=67 Identities=22% Similarity=0.235 Sum_probs=51.9
Q ss_pred eeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEeecCCc-cccccccC
Q 009785 158 GFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFS-NLRRSLCN 231 (526)
Q Consensus 158 ~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~ADG~~S-~vR~~l~~ 231 (526)
.++...+.+.|.+.+.+. +++++.++ |+++..+++. |++.+.+| +++||.||.|+|.+| .+++.++.
T Consensus 149 ~~~~~~~~~~l~~~a~~~-Gv~i~~~~~V~~i~~~~~~---v~v~t~~g---~i~a~~VV~A~G~~s~~l~~~~g~ 217 (397)
T 2oln_A 149 TIDVRGTLAALFTLAQAA-GATLRAGETVTELVPDADG---VSVTTDRG---TYRAGKVVLACGPYTNDLLEPLGA 217 (397)
T ss_dssp EEEHHHHHHHHHHHHHHT-TCEEEESCCEEEEEEETTE---EEEEESSC---EEEEEEEEECCGGGHHHHHGGGTC
T ss_pred EEcHHHHHHHHHHHHHHc-CCEEECCCEEEEEEEcCCe---EEEEECCC---EEEcCEEEEcCCcChHHHhhhcCC
Confidence 456678889999988887 78888874 9999987774 44555555 377999999999994 67777765
No 47
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.37 E-value=6.7e-12 Score=118.32 Aligned_cols=131 Identities=27% Similarity=0.287 Sum_probs=89.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCe
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 139 (526)
++||+|||||++|+.+|+.|+++|.+|+|+|+.... .|...++.. ..+.....+..++
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~----~G~~~~~~~----~~~~~~~~~~~~~-------------- 60 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDA----VMMPFLPPK----PPFPPGSLLERAY-------------- 60 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGG----TTCCSSCCC----SCCCTTCHHHHHC--------------
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCc----CCcccCccc----cccchhhHHhhhc--------------
Confidence 589999999999999999999999999999998321 111111100 0000000000000
Q ss_pred eeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEee
Q 009785 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCD 219 (526)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~AD 219 (526)
+ .. +. ++..+.+.|.+.+++.++++++.++|+++..+++.+.+|. ..+|+ +++||+||.|+
T Consensus 61 ---------d-~~---g~--~~~~~~~~l~~~~~~~~gv~i~~~~v~~i~~~~~~v~~v~--~~~g~--~i~a~~VV~A~ 121 (232)
T 2cul_A 61 ---------D-PK---DE--RVWAFHARAKYLLEGLRPLHLFQATATGLLLEGNRVVGVR--TWEGP--PARGEKVVLAV 121 (232)
T ss_dssp ---------C-TT---CC--CHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEE--ETTSC--CEECSEEEECC
T ss_pred ---------c-CC---CC--CHHHHHHHHHHHHHcCCCcEEEEeEEEEEEEeCCEEEEEE--ECCCC--EEECCEEEECC
Confidence 0 00 01 5667889999999887789998767999988877665454 45675 47799999999
Q ss_pred cCCccccccccC
Q 009785 220 GCFSNLRRSLCN 231 (526)
Q Consensus 220 G~~S~vR~~l~~ 231 (526)
|.+|..+..++.
T Consensus 122 G~~s~~~~~~G~ 133 (232)
T 2cul_A 122 GSFLGARLFLGG 133 (232)
T ss_dssp TTCSSCEEEETT
T ss_pred CCChhhceecCC
Confidence 999998877654
No 48
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.36 E-value=5.6e-12 Score=123.60 Aligned_cols=142 Identities=25% Similarity=0.289 Sum_probs=95.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhC--CCeEEEEecCCCCCCcc-------cceeeCcchHHHHHHcCCcchhhcccceee
Q 009785 59 FDADVIVVGAGVAGAALANTLAKD--GRRVHVIERDLSEPDRI-------VGELLQPGGYLKLIELGLEDCVEQIDAQRV 129 (526)
Q Consensus 59 ~~~dVvIVGaG~aGl~~A~~La~~--G~~V~l~Er~~~~~~~~-------~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~ 129 (526)
.++||+||||||+|+++|+.|+++ |.+|+|+|+++...... ....+.+...+.|+++|+.-.-
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~-------- 135 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYED-------- 135 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCEE--------
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCccccc--------
Confidence 357999999999999999999998 99999999986543211 1122334445566666643110
Q ss_pred eeeEEEECCeeeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEee---C-C--eEEEEEEEe
Q 009785 130 FGYALFKDGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEE---K-G--TIKGVQYKT 202 (526)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~---~-~--~v~gv~v~~ 202 (526)
.+. .....+...+...|++.+.+.++++++.++ |+++..+ + + +|.||.+..
T Consensus 136 -------~g~---------------~~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~ 193 (326)
T 2gjc_A 136 -------EGD---------------YVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNW 193 (326)
T ss_dssp -------CSS---------------EEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEE
T ss_pred -------CCC---------------eEEEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecc
Confidence 000 000113456788999999887899999885 9999876 3 4 788888752
Q ss_pred ----CCC------cEEEEEc---------------CeEEEeecCCcccccccc
Q 009785 203 ----KAG------EELTAYA---------------PLTIVCDGCFSNLRRSLC 230 (526)
Q Consensus 203 ----~~G------~~~~i~a---------------~~vV~ADG~~S~vR~~l~ 230 (526)
.+| +..++.| ++||.|+|..|++.+.+.
T Consensus 194 ~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~~~~~~~~ 246 (326)
T 2gjc_A 194 TLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFCA 246 (326)
T ss_dssp HHHHTC---CCCCCCEEEEESCCCSSSCCCSSTTCCEEEECCCCC--CCSHHH
T ss_pred eeecccccceeccCceEEEEeeccccccccccccCCEEEECcCCCchHHHHHH
Confidence 233 3356788 999999999888877664
No 49
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.34 E-value=3.2e-12 Score=135.03 Aligned_cols=62 Identities=27% Similarity=0.411 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHcCCCeEEEece-EEEEEee-CCeEEEEEEEeCCCcEEEEEcC-eEEEeecCCcccc
Q 009785 163 RFVQRLREKAASLPNVRLEQGT-VTSLLEE-KGTIKGVQYKTKAGEELTAYAP-LTIVCDGCFSNLR 226 (526)
Q Consensus 163 ~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~-~~~v~gv~v~~~~G~~~~i~a~-~vV~ADG~~S~vR 226 (526)
.+...|.+.+++. ++++++++ |++++.+ +++|+||++.. +|+..+++|+ .||.|+|.+|.-+
T Consensus 203 ~l~~~L~~~~~~~-Gv~i~~~t~v~~L~~~~~g~v~GV~~~~-~g~~~~i~A~k~VVlAtGG~~~n~ 267 (510)
T 4at0_A 203 MLMKPLVETAEKL-GVRAEYDMRVQTLVTDDTGRVVGIVAKQ-YGKEVAVRARRGVVLATGSFAYND 267 (510)
T ss_dssp HHHHHHHHHHHHT-TCEEECSEEEEEEEECTTCCEEEEEEEE-TTEEEEEEEEEEEEECCCCCTTCH
T ss_pred HHHHHHHHHHHHc-CCEEEecCEeEEEEECCCCcEEEEEEEE-CCcEEEEEeCCeEEEeCCChhhCH
Confidence 7889999999887 79999885 9999987 68899998876 4555679995 9999999999543
No 50
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.34 E-value=5e-12 Score=129.64 Aligned_cols=143 Identities=24% Similarity=0.283 Sum_probs=85.9
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcc----cce------------ee--Cc-chHHHHHHcCCc
Q 009785 58 PFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRI----VGE------------LL--QP-GGYLKLIELGLE 118 (526)
Q Consensus 58 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~----~g~------------~l--~~-~~~~~l~~lGl~ 118 (526)
+.++||+|||||++|+++|+.|+++|.+|+|+||.+...... .|. .+ .+ .....+..+...
T Consensus 25 ~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~ 104 (417)
T 3v76_A 25 AEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQ 104 (417)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHH
Confidence 346899999999999999999999999999999997643211 000 00 00 001122222221
Q ss_pred chhhcccceeeeeeEEEECCeeeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEE
Q 009785 119 DCVEQIDAQRVFGYALFKDGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKG 197 (526)
Q Consensus 119 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~g 197 (526)
+.+.-... .+....... ....-.......+.+.|.+.+.+. +++++.++ |+++..+++.
T Consensus 105 ~~~~~~~~---~Gi~~~~~~-------------~g~~~~~~~~~~l~~~L~~~l~~~-Gv~i~~~~~V~~i~~~~~~--- 164 (417)
T 3v76_A 105 DFVALVER---HGIGWHEKT-------------LGQLFCDHSAKDIIRMLMAEMKEA-GVQLRLETSIGEVERTASG--- 164 (417)
T ss_dssp HHHHHHHH---TTCCEEECS-------------TTEEEESSCHHHHHHHHHHHHHHH-TCEEECSCCEEEEEEETTE---
T ss_pred HHHHHHHH---cCCCcEEee-------------CCEEeeCCCHHHHHHHHHHHHHHC-CCEEEECCEEEEEEEeCCE---
Confidence 11111000 000000000 000000123457888899888887 78999885 9999887774
Q ss_pred EEEEeCCCcEEEEEcCeEEEeecCCc
Q 009785 198 VQYKTKAGEELTAYAPLTIVCDGCFS 223 (526)
Q Consensus 198 v~v~~~~G~~~~i~a~~vV~ADG~~S 223 (526)
+.+.+.+| +++||.||.|+|.+|
T Consensus 165 ~~V~~~~g---~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 165 FRVTTSAG---TVDAASLVVASGGKS 187 (417)
T ss_dssp EEEEETTE---EEEESEEEECCCCSS
T ss_pred EEEEECCc---EEEeeEEEECCCCcc
Confidence 55666766 478999999999999
No 51
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.31 E-value=2.1e-11 Score=126.25 Aligned_cols=62 Identities=24% Similarity=0.342 Sum_probs=49.5
Q ss_pred eeechHHHHHHHHHHHcCCCeEEEec----eEEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEeecCCcc
Q 009785 158 GFHNGRFVQRLREKAASLPNVRLEQG----TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFSN 224 (526)
Q Consensus 158 ~~~~~~l~~~L~~~a~~~~~v~i~~~----~v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~ADG~~S~ 224 (526)
.++...+.+.|.+.+++. +++++.+ +|+++..+++++.+|+ +.+|+ +++||.||.|+|.+|.
T Consensus 157 ~~~~~~~~~~L~~~a~~~-Gv~i~~~t~~~~V~~i~~~~~~v~gV~--t~~G~--~i~Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 157 WAHARNALVAAAREAQRM-GVKFVTGTPQGRVVTLIFENNDVKGAV--TADGK--IWRAERTFLCAGASAG 222 (438)
T ss_dssp EECHHHHHHHHHHHHHHT-TCEEEESTTTTCEEEEEEETTEEEEEE--ETTTE--EEECSEEEECCGGGGG
T ss_pred EecHHHHHHHHHHHHHhc-CCEEEeCCcCceEEEEEecCCeEEEEE--ECCCC--EEECCEEEECCCCChh
Confidence 445568889999999887 6888876 6999998888766554 56674 4779999999999985
No 52
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.28 E-value=2.5e-10 Score=121.95 Aligned_cols=72 Identities=24% Similarity=0.212 Sum_probs=56.6
Q ss_pred eechHHHHHHHHHHHcCCCeEEEec-eEEEEEeeCCeEEEEEEEeC-CCcEEEEEcCeEEEeecCCc-cccccccC
Q 009785 159 FHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTK-AGEELTAYAPLTIVCDGCFS-NLRRSLCN 231 (526)
Q Consensus 159 ~~~~~l~~~L~~~a~~~~~v~i~~~-~v~~l~~~~~~v~gv~v~~~-~G~~~~i~a~~vV~ADG~~S-~vR~~l~~ 231 (526)
++...+...|.+.+.+. |++++.+ +|+++..+++++.+|++.+. +|+..+++||.||.|+|.+| .+++..+.
T Consensus 185 v~~~~l~~~l~~~a~~~-Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~~l~~~~g~ 259 (571)
T 2rgh_A 185 NNDARLVIDNIKKAAED-GAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVDKVRNLNFT 259 (571)
T ss_dssp CCHHHHHHHHHHHHHHT-TCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGHHHHHTTCCS
T ss_pred EchHHHHHHHHHHHHHc-CCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhHHHHHHhhcc
Confidence 45567888888888887 7888887 59999988888888888763 56555789999999999998 56665554
No 53
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.28 E-value=3.9e-11 Score=127.55 Aligned_cols=155 Identities=17% Similarity=0.198 Sum_probs=96.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC-CCCcccceee---C-cchHHHHHHcCC-cchhhcccceeeeeeE
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS-EPDRIVGELL---Q-PGGYLKLIELGL-EDCVEQIDAQRVFGYA 133 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~-~~~~~~g~~l---~-~~~~~~l~~lGl-~~~l~~~~~~~~~~~~ 133 (526)
++||+|||||++|+++|+.|++.|.+|+|+|++.. .....+...+ . ....+.++.+|- ...... . ....+.
T Consensus 28 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d--~-~gi~f~ 104 (651)
T 3ces_A 28 PFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAID--Q-AGIQFR 104 (651)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHH--H-HEEEEE
T ss_pred cCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhh--h-cccchh
Confidence 69999999999999999999999999999999742 2221221111 1 112233333332 111100 0 000011
Q ss_pred EEECCeeeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEEcC
Q 009785 134 LFKDGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAYAP 213 (526)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~v~~l~~~~~~v~gv~v~~~~G~~~~i~a~ 213 (526)
....... + ........+++..+...|.+.+.+.++++++.++|+++..+++.+.+|.. .+|. +++||
T Consensus 105 ~l~~~kg-----p----av~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~~~~V~~L~~e~g~V~GV~t--~dG~--~I~Ad 171 (651)
T 3ces_A 105 ILNASKG-----P----AVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVT--QMGL--KFRAK 171 (651)
T ss_dssp EESTTSC-----G----GGCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEESSSBEEEEEE--TTSE--EEEEE
T ss_pred hhhcccC-----c----ccccchhhCCHHHHHHHHHHHHHhCCCCEEEEEEEEEEEecCCEEEEEEE--CCCC--EEECC
Confidence 1110000 0 00011124677788899999988866899977789999887787766653 5664 57899
Q ss_pred eEEEeecCCcccccccc
Q 009785 214 LTIVCDGCFSNLRRSLC 230 (526)
Q Consensus 214 ~vV~ADG~~S~vR~~l~ 230 (526)
.||.|||.+|..+...+
T Consensus 172 ~VVLATGt~s~~~~i~G 188 (651)
T 3ces_A 172 AVVLTVGTFLDGKIHIG 188 (651)
T ss_dssp EEEECCSTTTCCEEECC
T ss_pred EEEEcCCCCccCccccC
Confidence 99999999998776554
No 54
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.27 E-value=2.3e-10 Score=117.83 Aligned_cols=58 Identities=19% Similarity=0.235 Sum_probs=44.9
Q ss_pred hHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEeecCCccc
Q 009785 162 GRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFSNL 225 (526)
Q Consensus 162 ~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~ADG~~S~v 225 (526)
..+.+.|.+.+.+. |++++.++ |+++..+++++.+|+. + |+ +++||.||.|.|.+...
T Consensus 196 ~~l~~~l~~~~~~~-G~~i~~~~~V~~i~~~~~~~~gv~~--~-g~--~~~ad~VV~a~~~~~~~ 254 (425)
T 3ka7_A 196 KGIIDALETVISAN-GGKIHTGQEVSKILIENGKAAGIIA--D-DR--IHDADLVISNLGHAATA 254 (425)
T ss_dssp HHHHHHHHHHHHHT-TCEEECSCCEEEEEEETTEEEEEEE--T-TE--EEECSEEEECSCHHHHH
T ss_pred HHHHHHHHHHHHHc-CCEEEECCceeEEEEECCEEEEEEE--C-CE--EEECCEEEECCCHHHHH
Confidence 34667788888887 68888885 9999988887776654 2 54 47799999999988754
No 55
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.27 E-value=6.8e-11 Score=126.86 Aligned_cols=69 Identities=14% Similarity=0.229 Sum_probs=58.0
Q ss_pred hHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEEcCeEEEeecCCcccccccc
Q 009785 162 GRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKT-KAGEELTAYAPLTIVCDGCFSNLRRSLC 230 (526)
Q Consensus 162 ~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~-~~G~~~~i~a~~vV~ADG~~S~vR~~l~ 230 (526)
..+...|.+.+.+.++++++.++ |+++..+++.+.||.+.+ .+|+..+++|+.||.|||.+|.++....
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~~~~~~ 204 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYNT 204 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCCCGGGSSSBS
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCcccccCcC
Confidence 36888999999888669999885 999998888888887765 6787677899999999999999876554
No 56
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.26 E-value=2.9e-11 Score=125.46 Aligned_cols=153 Identities=20% Similarity=0.254 Sum_probs=92.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcc--cc----eeeCcchH-HHHHHcCCcchhh-----cccc
Q 009785 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRI--VG----ELLQPGGY-LKLIELGLEDCVE-----QIDA 126 (526)
Q Consensus 59 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~--~g----~~l~~~~~-~~l~~lGl~~~l~-----~~~~ 126 (526)
+++||+|||||++|+++|+.|+++|.+|+|+||.+...... .+ ...+.... ..++.++....+. ....
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNN 104 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCH
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCH
Confidence 35899999999999999999999999999999986542210 00 00000001 1122221110000 0000
Q ss_pred e------eeeeeEEEECCeeeeecCCCcCCCCCccccee----echHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeE
Q 009785 127 Q------RVFGYALFKDGNRTQISYPLEKFHSDVAGRGF----HNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTI 195 (526)
Q Consensus 127 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v 195 (526)
. ...+..+. ....+..+ ....+.+.|.+.+++. +++++.++ |+++..+++++
T Consensus 105 ~~~~~~~~~~G~~~~----------------~~~~g~~~p~~~~~~~l~~~L~~~~~~~-GV~i~~~~~V~~i~~~~~~v 167 (447)
T 2i0z_A 105 EDIITFFENLGVKLK----------------EEDHGRMFPVSNKAQSVVDALLTRLKDL-GVKIRTNTPVETIEYENGQT 167 (447)
T ss_dssp HHHHHHHHHTTCCEE----------------ECGGGEEEETTCCHHHHHHHHHHHHHHT-TCEEECSCCEEEEEEETTEE
T ss_pred HHHHHHHHhcCCceE----------------EeeCCEEECCCCCHHHHHHHHHHHHHHC-CCEEEeCcEEEEEEecCCcE
Confidence 0 00000000 00112222 2356888899988886 79998885 99999877765
Q ss_pred EEEEEEeCCCcEEEEEcCeEEEeecCCc-----------cccccccCC
Q 009785 196 KGVQYKTKAGEELTAYAPLTIVCDGCFS-----------NLRRSLCNP 232 (526)
Q Consensus 196 ~gv~v~~~~G~~~~i~a~~vV~ADG~~S-----------~vR~~l~~~ 232 (526)
.+|+ ..+|+ +++||.||.|+|.+| .+++.++..
T Consensus 168 ~~V~--~~~G~--~i~Ad~VVlAtGg~s~~~~g~tG~g~~la~~~G~~ 211 (447)
T 2i0z_A 168 KAVI--LQTGE--VLETNHVVIAVGGKSVPQTGSTGDGYAWAEKAGHT 211 (447)
T ss_dssp EEEE--ETTCC--EEECSCEEECCCCSSSGGGSCSSHHHHHHHHTTCC
T ss_pred EEEE--ECCCC--EEECCEEEECCCCCcCCCCCCCcHHHHHHHHCCCC
Confidence 5555 45665 478999999999999 777777754
No 57
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.25 E-value=1.4e-11 Score=131.74 Aligned_cols=163 Identities=19% Similarity=0.263 Sum_probs=97.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcc--cceeeCcchHHHHHHcCCcchhhcc------------
Q 009785 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRI--VGELLQPGGYLKLIELGLEDCVEQI------------ 124 (526)
Q Consensus 59 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~--~g~~l~~~~~~~l~~lGl~~~l~~~------------ 124 (526)
.++||+|||||++|+++|+.|+++|.+|+|+|+.+...... .+..++.......++.|+.+.....
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~ 204 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNIN 204 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCC
Confidence 36899999999999999999999999999999987554321 1111111100111111211110000
Q ss_pred --------cc--------eeeeeeEE--E--ECCeeeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece
Q 009785 125 --------DA--------QRVFGYAL--F--KDGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT 184 (526)
Q Consensus 125 --------~~--------~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~ 184 (526)
.. ....+..+ . ..+.. ++ .. ..+.+.......+...|.+.+.+. +++++.++
T Consensus 205 ~~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg~~----~~--r~-~~~~~~~~~g~~l~~~L~~~~~~~-gv~i~~~t 276 (572)
T 1d4d_A 205 DPELVKVLANNSSDSIDWLTSMGADMTDVGRMGGAS----VN--RS-HRPTGGAGVGAHVAQVLWDNAVKR-GTDIRLNS 276 (572)
T ss_dssp CHHHHHHHHHTHHHHHHHHHHHTCCCCEEECCTTCS----SC--CE-EESTTTCCHHHHHHHHHHHHHHHT-TCEEESSE
T ss_pred CHHHHHHHHHccHHHHHHHHhcCCccccccccCCCc----CC--ee-EecCCCCCCHHHHHHHHHHHHHHc-CCeEEecC
Confidence 00 00000000 0 00000 00 00 000001122456888999999887 79999885
Q ss_pred -EEEEEeeC-CeEEEEEEEeCCCcEEEEEcCeEEEeecCCccccccc
Q 009785 185 -VTSLLEEK-GTIKGVQYKTKAGEELTAYAPLTIVCDGCFSNLRRSL 229 (526)
Q Consensus 185 -v~~l~~~~-~~v~gv~v~~~~G~~~~i~a~~vV~ADG~~S~vR~~l 229 (526)
|+++..++ ++|.+|++.+.+|+..+++||.||.|+|.+|..++.+
T Consensus 277 ~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~~~~~~ 323 (572)
T 1d4d_A 277 RVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAKNNERV 323 (572)
T ss_dssp EEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCTTCHHHH
T ss_pred EEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCccCHHHH
Confidence 99998776 8888999887778777799999999999999865443
No 58
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.25 E-value=7.6e-11 Score=124.88 Aligned_cols=152 Identities=16% Similarity=0.190 Sum_probs=96.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC-CCCccccee---eC-cchHHHHHHcCC-cchhhcccceeeeeeE
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS-EPDRIVGEL---LQ-PGGYLKLIELGL-EDCVEQIDAQRVFGYA 133 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~-~~~~~~g~~---l~-~~~~~~l~~lGl-~~~l~~~~~~~~~~~~ 133 (526)
++||+|||||++|+++|+.|++.|.+|+|+|++.. .....+... +. ....+.++.+|- ...... . .+..
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d--~---~gi~ 101 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAID--Q---TGIQ 101 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHH--H---HEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhh--h---cccc
Confidence 59999999999999999999999999999999742 221111111 11 112233344432 111110 0 0111
Q ss_pred E--EECCeeeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEE
Q 009785 134 L--FKDGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAY 211 (526)
Q Consensus 134 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~v~~l~~~~~~v~gv~v~~~~G~~~~i~ 211 (526)
+ ...... + ........+++..+...|.+.+.+.++++++.++|+++..+++.+.+|. ..+|. +++
T Consensus 102 f~~l~~~kG-----p----av~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~~~~Vt~L~~e~g~V~GV~--t~dG~--~i~ 168 (637)
T 2zxi_A 102 FKMLNTRKG-----K----AVQSPRAQADKKRYREYMKKVCENQENLYIKQEEVVDIIVKNNQVVGVR--TNLGV--EYK 168 (637)
T ss_dssp EEEESTTSC-----G----GGCEEEEEECHHHHHHHHHHHHHTCTTEEEEESCEEEEEESSSBEEEEE--ETTSC--EEE
T ss_pred eeecccccC-----c----cccchhhhCCHHHHHHHHHHHHHhCCCCEEEEeEEEEEEecCCEEEEEE--ECCCc--EEE
Confidence 1 110000 0 0001112456778899999999886789997778999988888777665 45675 477
Q ss_pred cCeEEEeecCCccccccc
Q 009785 212 APLTIVCDGCFSNLRRSL 229 (526)
Q Consensus 212 a~~vV~ADG~~S~vR~~l 229 (526)
||.||.|+|.++..+...
T Consensus 169 AdaVVLATG~~s~~~~~~ 186 (637)
T 2zxi_A 169 TKAVVVTTGTFLNGVIYI 186 (637)
T ss_dssp CSEEEECCTTCBTCEEEE
T ss_pred eCEEEEccCCCccCceec
Confidence 999999999998876554
No 59
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.24 E-value=3.6e-10 Score=118.95 Aligned_cols=64 Identities=14% Similarity=0.141 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEeecCCccccccccC
Q 009785 163 RFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFSNLRRSLCN 231 (526)
Q Consensus 163 ~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~ADG~~S~vR~~l~~ 231 (526)
.+.+.|.+.+++. |++++.++ |++++.+++++++|+ ..+|++ +.||.||.+.+.....++.+..
T Consensus 222 ~l~~aL~~~~~~~-Gg~I~~~~~V~~I~~~~~~~~gV~--~~~g~~--~~ad~VV~~a~~~~~~~~Ll~~ 286 (501)
T 4dgk_A 222 ALVQGMIKLFQDL-GGEVVLNARVSHMETTGNKIEAVH--LEDGRR--FLTQAVASNADVVHTYRDLLSQ 286 (501)
T ss_dssp HHHHHHHHHHHHT-TCEEECSCCEEEEEEETTEEEEEE--ETTSCE--EECSCEEECCC-----------
T ss_pred chHHHHHHHHHHh-CCceeeecceeEEEeeCCeEEEEE--ecCCcE--EEcCEEEECCCHHHHHHHhccc
Confidence 4667788888887 68888885 999999999887765 567874 6799999988888777766643
No 60
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.24 E-value=6e-11 Score=126.09 Aligned_cols=153 Identities=24% Similarity=0.264 Sum_probs=94.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC-CCCcccceeeCc-chHHHHHH---cC-Ccchhhcccceeeeee
Q 009785 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS-EPDRIVGELLQP-GGYLKLIE---LG-LEDCVEQIDAQRVFGY 132 (526)
Q Consensus 59 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~-~~~~~~g~~l~~-~~~~~l~~---lG-l~~~l~~~~~~~~~~~ 132 (526)
.++||+|||||++|+++|+.|++.|.+|+|+|++.. .....+...... ....++++ ++ +...... ... ..+
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d--~~g-i~f 96 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAID--ATG-IQF 96 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHH--HHE-EEE
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHH--hcC-Cch
Confidence 469999999999999999999999999999999842 222111111110 11123333 22 1111100 000 001
Q ss_pred EEEECCeeeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEEc
Q 009785 133 ALFKDGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAYA 212 (526)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~v~~l~~~~~~v~gv~v~~~~G~~~~i~a 212 (526)
........ + ........+++..+...|.+.+.+.++++++.++|+++..+++.+.+|. ..+|. +++|
T Consensus 97 ~~l~~~kg-----p----av~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~~V~~L~~d~g~V~GV~--t~~G~--~i~A 163 (641)
T 3cp8_A 97 RMLNRSKG-----P----AMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQDTVIGVSANSGKFSSVT--VRSGR--AIQA 163 (641)
T ss_dssp EEECSSSC-----T----TTCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEE--ETTSC--EEEE
T ss_pred hhcccccC-----c----cccchhhhcCHHHHHHHHHHHHHhCCCCEEEeeEEEEEEecCCEEEEEE--ECCCc--EEEe
Confidence 11111100 0 0001123567788999999999887799998878999988888777665 45675 4779
Q ss_pred CeEEEeecCCccccc
Q 009785 213 PLTIVCDGCFSNLRR 227 (526)
Q Consensus 213 ~~vV~ADG~~S~vR~ 227 (526)
|.||.|||.++..+.
T Consensus 164 d~VVLATG~~s~~~i 178 (641)
T 3cp8_A 164 KAAILACGTFLNGLI 178 (641)
T ss_dssp EEEEECCTTCBTCEE
T ss_pred CEEEECcCCCCCccc
Confidence 999999999986544
No 61
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.23 E-value=1e-10 Score=123.42 Aligned_cols=153 Identities=20% Similarity=0.213 Sum_probs=85.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECC
Q 009785 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDG 138 (526)
Q Consensus 59 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 138 (526)
.++||+||||||+|+++|+.|++.|++|+|+||.+....+.+.. ........+.. ..... ....+...+.++
T Consensus 106 ~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~------~g~w~~~~~~~-~~~i~-~g~gGag~~sdg 177 (549)
T 3nlc_A 106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDT------FGFWRKRTLNP-ESNVQ-FGEGGAGTFSDG 177 (549)
T ss_dssp CCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHH------HHHHHHCCCCT-TSSSS-SSTTGGGTTSCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccch------hcccccccccc-cccce-eccCCcccccCC
Confidence 45899999999999999999999999999999985421111000 00000000000 00000 000000000000
Q ss_pred eee----------------eecCCCc---CCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEE
Q 009785 139 NRT----------------QISYPLE---KFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGV 198 (526)
Q Consensus 139 ~~~----------------~~~~~~~---~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv 198 (526)
... ...+... .....+.........+.+.|++.+.+. ++++++++ |+++..+++++.+|
T Consensus 178 kl~~~i~~~~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~-Gv~I~~~t~V~~I~~~~~~v~gV 256 (549)
T 3nlc_A 178 KLYSQVKDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIEL-GGEIRFSTRVDDLHMEDGQITGV 256 (549)
T ss_dssp CCCCCSCCTTCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHT-TCEEESSCCEEEEEESSSBEEEE
T ss_pred ceEEEeccccccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhc-CCEEEeCCEEEEEEEeCCEEEEE
Confidence 000 0000000 000001111223456888899888887 79999885 99998887776655
Q ss_pred EEEeCCCcEEEEEcCeEEEeecCCcc
Q 009785 199 QYKTKAGEELTAYAPLTIVCDGCFSN 224 (526)
Q Consensus 199 ~v~~~~G~~~~i~a~~vV~ADG~~S~ 224 (526)
+ ..+|+ +++||+||.|+|.+|.
T Consensus 257 ~--l~~G~--~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 257 T--LSNGE--EIKSRHVVLAVGHSAR 278 (549)
T ss_dssp E--ETTSC--EEECSCEEECCCTTCH
T ss_pred E--ECCCC--EEECCEEEECCCCChh
Confidence 5 45676 4779999999999995
No 62
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.22 E-value=4.7e-11 Score=121.87 Aligned_cols=139 Identities=21% Similarity=0.222 Sum_probs=82.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCccc----cee--e----Cc--------c-hHHHHHHcCCcc
Q 009785 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIV----GEL--L----QP--------G-GYLKLIELGLED 119 (526)
Q Consensus 59 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~----g~~--l----~~--------~-~~~~l~~lGl~~ 119 (526)
+++||+|||||++|+++|+.|+++|.+|+|+||++....... |.. . .+ . ....+..+...+
T Consensus 3 ~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (401)
T 2gqf_A 3 QYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWD 82 (401)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHH
Confidence 368999999999999999999999999999999865422110 000 0 00 0 000111111100
Q ss_pred hhhcccceeeeeeEEEECCeeeeecCCCcCCCCCccccee---echHHHHHHHHHHHcCCCeEEEece-EEEEEee----
Q 009785 120 CVEQIDAQRVFGYALFKDGNRTQISYPLEKFHSDVAGRGF---HNGRFVQRLREKAASLPNVRLEQGT-VTSLLEE---- 191 (526)
Q Consensus 120 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~---- 191 (526)
.+.... ..+..+.. ...+..+ ....+.+.|.+.+++. +++++.++ |+++..+
T Consensus 83 ~~~~~~---~~Gi~~~~----------------~~~g~~~p~~~~~~l~~~L~~~~~~~-Gv~i~~~~~v~~i~~~~~g~ 142 (401)
T 2gqf_A 83 FISLVA---EQGITYHE----------------KELGQLFCDEGAEQIVEMLKSECDKY-GAKILLRSEVSQVERIQNDE 142 (401)
T ss_dssp HHHHHH---HTTCCEEE----------------CSTTEEEETTCTHHHHHHHHHHHHHH-TCEEECSCCEEEEEECCSCS
T ss_pred HHHHHH---hCCCceEE----------------CcCCEEccCCCHHHHHHHHHHHHHHC-CCEEEeCCEEEEEEcccCcC
Confidence 000000 00000000 0011111 4567888888888876 79999885 9999865
Q ss_pred CCeEEEEEEEeCCCcEEEEEcCeEEEeecCCc
Q 009785 192 KGTIKGVQYKTKAGEELTAYAPLTIVCDGCFS 223 (526)
Q Consensus 192 ~~~v~gv~v~~~~G~~~~i~a~~vV~ADG~~S 223 (526)
++. +.+..++| +++||.||.|+|.+|
T Consensus 143 ~~~---~~v~~~~g---~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 143 KVR---FVLQVNST---QWQCKNLIVATGGLS 168 (401)
T ss_dssp SCC---EEEEETTE---EEEESEEEECCCCSS
T ss_pred CCe---EEEEECCC---EEECCEEEECCCCcc
Confidence 443 34555555 478999999999999
No 63
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=99.21 E-value=3e-10 Score=114.46 Aligned_cols=36 Identities=42% Similarity=0.658 Sum_probs=33.5
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 58 PFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 58 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
+.++||+|||||++|+++|+.|+++|.+|+|+||..
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 346899999999999999999999999999999975
No 64
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.21 E-value=8.1e-11 Score=106.11 Aligned_cols=117 Identities=26% Similarity=0.349 Sum_probs=83.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCee
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 140 (526)
+||+|||||++|+.+|..|++.|.+|+|+|+.+....+. ..+.
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~-------------------~~~~------------------ 44 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGV-------------------SRVP------------------ 44 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTC-------------------SCCC------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCc-------------------hhhh------------------
Confidence 699999999999999999999999999999985211100 0000
Q ss_pred eeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEeec
Q 009785 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDG 220 (526)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~ADG 220 (526)
.++ .++ ..+....+.+.+.+.+++. +++++.++|+++..+++. +.+..++| ++.+|+||.|+|
T Consensus 45 ---~~~--~~~-----~~~~~~~~~~~l~~~~~~~-gv~v~~~~v~~i~~~~~~---~~v~~~~g---~i~ad~vI~A~G 107 (180)
T 2ywl_A 45 ---NYP--GLL-----DEPSGEELLRRLEAHARRY-GAEVRPGVVKGVRDMGGV---FEVETEEG---VEKAERLLLCTH 107 (180)
T ss_dssp ---CST--TCT-----TCCCHHHHHHHHHHHHHHT-TCEEEECCCCEEEECSSS---EEEECSSC---EEEEEEEEECCT
T ss_pred ---ccC--CCc-----CCCCHHHHHHHHHHHHHHc-CCEEEeCEEEEEEEcCCE---EEEEECCC---EEEECEEEECCC
Confidence 000 000 0123456788888888887 688888888888876554 44556666 477999999999
Q ss_pred CCccccccccC
Q 009785 221 CFSNLRRSLCN 231 (526)
Q Consensus 221 ~~S~vR~~l~~ 231 (526)
.++.+++.++.
T Consensus 108 ~~~~~~~~~g~ 118 (180)
T 2ywl_A 108 KDPTLPSLLGL 118 (180)
T ss_dssp TCCHHHHHHTC
T ss_pred CCCCccccCCC
Confidence 99987776654
No 65
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.18 E-value=7.5e-11 Score=125.03 Aligned_cols=65 Identities=22% Similarity=0.203 Sum_probs=50.2
Q ss_pred hHHHHHHHHHHHcCCCeEEEece-EEEEEe-eCC------eEEEEEEEe-CCCcEEEEEcCeEEEeecCCcccc
Q 009785 162 GRFVQRLREKAASLPNVRLEQGT-VTSLLE-EKG------TIKGVQYKT-KAGEELTAYAPLTIVCDGCFSNLR 226 (526)
Q Consensus 162 ~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~-~~~------~v~gv~v~~-~~G~~~~i~a~~vV~ADG~~S~vR 226 (526)
..+...|.+.+.+.+++++++++ |+++.. +++ ++.||.+.+ .+|+..+++|+.||.|+|.+|.+-
T Consensus 138 ~~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~ 211 (540)
T 1chu_A 138 REVETTLVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASKVY 211 (540)
T ss_dssp ----CCCHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCGGGS
T ss_pred HHHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCccccc
Confidence 35667788888875689999985 999987 445 788888876 567767789999999999999763
No 66
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.17 E-value=7.9e-10 Score=113.71 Aligned_cols=55 Identities=15% Similarity=0.155 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEeecCCccc
Q 009785 163 RFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFSNL 225 (526)
Q Consensus 163 ~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~ADG~~S~v 225 (526)
.+.+.|.+.+.+. |++++.++ |+++..+++++ + ..+|+ +++||.||.|.|.+...
T Consensus 190 ~l~~~l~~~~~~~-G~~i~~~~~V~~i~~~~~~v----V-~~~g~--~~~ad~Vv~a~~~~~~~ 245 (421)
T 3nrn_A 190 AVIDELERIIMEN-KGKILTRKEVVEINIEEKKV----Y-TRDNE--EYSFDVAISNVGVRETV 245 (421)
T ss_dssp HHHHHHHHHHHTT-TCEEESSCCEEEEETTTTEE----E-ETTCC--EEECSEEEECSCHHHHH
T ss_pred HHHHHHHHHHHHC-CCEEEcCCeEEEEEEECCEE----E-EeCCc--EEEeCEEEECCCHHHHH
Confidence 5666777778777 78999885 99999877754 3 34565 46799999999987654
No 67
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.17 E-value=3.3e-10 Score=121.58 Aligned_cols=62 Identities=18% Similarity=0.212 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEEcCeEEEeecCCccc
Q 009785 163 RFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKT-KAGEELTAYAPLTIVCDGCFSNL 225 (526)
Q Consensus 163 ~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~-~~G~~~~i~a~~vV~ADG~~S~v 225 (526)
.+...|.+.+.+. +++++.++ |+++..+++++.||.+.+ .+|+..+++|+.||.|+|++|.+
T Consensus 156 ~l~~~L~~~~~~~-gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 219 (621)
T 2h88_A 156 SLLHTLYGRSLRY-DTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYGRT 219 (621)
T ss_dssp HHHHHHHHHHTTS-CCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred HHHHHHHHHHHhC-CCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccccc
Confidence 6788899888875 89999885 999998888899998876 67877789999999999999975
No 68
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.16 E-value=2.2e-10 Score=115.72 Aligned_cols=60 Identities=20% Similarity=0.217 Sum_probs=47.3
Q ss_pred eeechHHHHHHHHHHHcCCCeEEEec-eEEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEeecCCcc
Q 009785 158 GFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFSN 224 (526)
Q Consensus 158 ~~~~~~l~~~L~~~a~~~~~v~i~~~-~v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~ADG~~S~ 224 (526)
.++...+.+.|.+.+.+. +++++.+ +|+++..+++. +.+.+.+|+ ++||.||.|+|.+|.
T Consensus 145 ~~~~~~l~~~l~~~~~~~-G~~i~~~~~V~~i~~~~~~---~~v~~~~g~---~~a~~vV~a~G~~s~ 205 (372)
T 2uzz_A 145 FLRSELAIKTWIQLAKEA-GCAQLFNCPVTAIRHDDDG---VTIETADGE---YQAKKAIVCAGTWVK 205 (372)
T ss_dssp EEEHHHHHHHHHHHHHHT-TCEEECSCCEEEEEECSSS---EEEEESSCE---EEEEEEEECCGGGGG
T ss_pred EEcHHHHHHHHHHHHHHC-CCEEEcCCEEEEEEEcCCE---EEEEECCCe---EEcCEEEEcCCccHH
Confidence 456678899999999887 7888887 59999877664 345566663 779999999999884
No 69
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.16 E-value=1e-10 Score=119.84 Aligned_cols=167 Identities=16% Similarity=0.066 Sum_probs=90.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHhC--CCeEEEEecCCCCCCcc--cce-ee-Ccch----H--HHHHHcCCcchhhcc---
Q 009785 60 DADVIVVGAGVAGAALANTLAKD--GRRVHVIERDLSEPDRI--VGE-LL-QPGG----Y--LKLIELGLEDCVEQI--- 124 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~--G~~V~l~Er~~~~~~~~--~g~-~l-~~~~----~--~~l~~lGl~~~l~~~--- 124 (526)
++||+|||||++|+++|+.|+++ |++|+|+|+........ .+. .+ .+.. . ...+.+.++......
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~~s~~~~g~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 115 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNEEGATILAPGVWTAQDIPAGQEAQAEWTREQLLGALGSGKT 115 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCTTSHHHHCCCEECGGGCCTTCHHHHHHHHHHHHTGGGSSCC
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCcchhccCCcceeecccCCchHHHHHHHHHHHHHHHhCCCCC
Confidence 48999999999999999999999 99999999985332221 122 23 1111 0 111111111110000
Q ss_pred cceeeeeeEEEEC-----C----eeeeecCCC-------cCCC---CCcccceeechHHHHHHHHHHHcCCCeEEEece-
Q 009785 125 DAQRVFGYALFKD-----G----NRTQISYPL-------EKFH---SDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT- 184 (526)
Q Consensus 125 ~~~~~~~~~~~~~-----~----~~~~~~~~~-------~~~~---~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~- 184 (526)
......+...... + ......++. .... ..+....++...+.+.|.+.+++. ++++++++
T Consensus 116 ~~~~~~g~l~~~~~~~~~g~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~v~~~~l~~~L~~~~~~~-Gv~i~~~~~ 194 (405)
T 3c4n_A 116 LEVEDRPLLHLLPAGEGSGLTPTLDALADFPEALALLDPARLPVARVDPRALTYRPGSLALLAAQQAIGQ-GAGLLLNTR 194 (405)
T ss_dssp CCEEECCEEEEESSCCSSSCEEHHHHTTTCHHHHTTSCTTTSCEEEEETTCEEECHHHHHHHHHHHHHTT-TCEEECSCE
T ss_pred CcEEeeCeEEehhhHhHCCCCCHHHHHHhCCCccccccCCcceEEEEcCCCEEEcHHHHHHHHHHHHHHC-CCEEEcCCE
Confidence 0001111111000 0 000000000 0000 011223456678999999999887 78888774
Q ss_pred EE---------EEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEeecCCc-cccc-cccCCC
Q 009785 185 VT---------SLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFS-NLRR-SLCNPK 233 (526)
Q Consensus 185 v~---------~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~ADG~~S-~vR~-~l~~~~ 233 (526)
|+ ++..+++.+ .+.+.+| +++||.||.|+|.+| .+++ .++...
T Consensus 195 v~~~~g~~~~~~i~~~~~~v---~v~~~~g---~i~a~~VV~A~G~~s~~l~~~~~g~~~ 248 (405)
T 3c4n_A 195 AELVPGGVRLHRLTVTNTHQ---IVVHETR---QIRAGVIIVAAGAAGPALVEQGLGLHT 248 (405)
T ss_dssp EEEETTEEEEECBCC----------CBCCE---EEEEEEEEECCGGGHHHHHHHHHCCCC
T ss_pred EEeccccccccceEeeCCeE---EEEECCc---EEECCEEEECCCccHHHHHHHhcCCCC
Confidence 88 777666644 3344555 478999999999999 6777 776543
No 70
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.16 E-value=1.6e-10 Score=120.42 Aligned_cols=62 Identities=21% Similarity=0.306 Sum_probs=48.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCC------CeEEEEecCCCCCCcccc-----------e-e---eCcchHHHHHHcCCc
Q 009785 60 DADVIVVGAGVAGAALANTLAKDG------RRVHVIERDLSEPDRIVG-----------E-L---LQPGGYLKLIELGLE 118 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G------~~V~l~Er~~~~~~~~~g-----------~-~---l~~~~~~~l~~lGl~ 118 (526)
.+||+|||||++||++|+.|+++| ++|+|+|+++....+..+ . . ..+...+.++++|+.
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~ 84 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTVKKDGYIIERGPDSFLERKKSAPQLVKDLGLE 84 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCEECCTTCCEESSCCCEETTCTHHHHHHHHTTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEEeccCCEEeccChhhhhhCCHHHHHHHHHcCCc
Confidence 479999999999999999999999 999999998655432211 0 1 145566888999997
Q ss_pred chh
Q 009785 119 DCV 121 (526)
Q Consensus 119 ~~l 121 (526)
+.+
T Consensus 85 ~~~ 87 (470)
T 3i6d_A 85 HLL 87 (470)
T ss_dssp TTE
T ss_pred cee
Confidence 654
No 71
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.15 E-value=5.8e-10 Score=115.68 Aligned_cols=69 Identities=17% Similarity=0.185 Sum_probs=51.5
Q ss_pred eeechHHHHHHHHHHHcCCCeEEEec-eEEEEEe---------------eCCeEEEEEEEeCCCcEEEE--EcCeEEEee
Q 009785 158 GFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLE---------------EKGTIKGVQYKTKAGEELTA--YAPLTIVCD 219 (526)
Q Consensus 158 ~~~~~~l~~~L~~~a~~~~~v~i~~~-~v~~l~~---------------~~~~v~gv~v~~~~G~~~~i--~a~~vV~AD 219 (526)
.++...+.+.|.+.+++. +++++.+ +|+++.. +++++.+| .+.+|+ + +||.||.|+
T Consensus 177 ~~~~~~l~~~L~~~~~~~-Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V--~t~~g~---i~~~Ad~VV~At 250 (448)
T 3axb_A 177 FLDAEKVVDYYYRRASGA-GVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAA--VLSDGT---RVEVGEKLVVAA 250 (448)
T ss_dssp ECCHHHHHHHHHHHHHHT-TCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEE--EETTSC---EEEEEEEEEECC
T ss_pred EEcHHHHHHHHHHHHHhC-CCEEEcCCeEEEEEecccccccccccccccCCCceEEE--EeCCCE---EeecCCEEEECC
Confidence 345568889999999887 7888887 5999987 45544444 456663 6 799999999
Q ss_pred cCCcc-ccccccCC
Q 009785 220 GCFSN-LRRSLCNP 232 (526)
Q Consensus 220 G~~S~-vR~~l~~~ 232 (526)
|.+|. +.+.++..
T Consensus 251 G~~s~~l~~~~g~~ 264 (448)
T 3axb_A 251 GVWSNRLLNPLGID 264 (448)
T ss_dssp GGGHHHHHGGGTCC
T ss_pred CcCHHHHHHHcCCC
Confidence 99986 66666543
No 72
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.15 E-value=3.1e-10 Score=121.44 Aligned_cols=63 Identities=14% Similarity=0.199 Sum_probs=53.0
Q ss_pred hHHHHHHHHHHHcCCCeEEEece-EEEEEee-CCeEEEEEEEe-CCCcEEEEEcCeEEEeecCCccc
Q 009785 162 GRFVQRLREKAASLPNVRLEQGT-VTSLLEE-KGTIKGVQYKT-KAGEELTAYAPLTIVCDGCFSNL 225 (526)
Q Consensus 162 ~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~-~~~v~gv~v~~-~~G~~~~i~a~~vV~ADG~~S~v 225 (526)
..+...|.+.+.+. +++++.++ |+++..+ ++++.||.+.+ .+|+..+++|+.||.|+|.+|.+
T Consensus 143 ~~l~~~L~~~~~~~-gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~~ 208 (588)
T 2wdq_A 143 HALLHTLYQQNLKN-HTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRI 208 (588)
T ss_dssp HHHHHHHHHHHHHT-TCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHhC-CCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCccc
Confidence 46788899988887 89999885 9999875 67888898876 67877778999999999999864
No 73
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.12 E-value=2.9e-10 Score=114.36 Aligned_cols=127 Identities=18% Similarity=0.184 Sum_probs=84.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEEC
Q 009785 58 PFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKD 137 (526)
Q Consensus 58 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 137 (526)
+..+||+||||||+|+++|+.|++.|++|+|+|+.+... +.-. .+ . .. . ..+
T Consensus 12 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~g-----------g~~~--~~-~----~~---~-----~~~-- 63 (360)
T 3ab1_A 12 HDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLG-----------GQLA--AL-Y----PE---K-----HIY-- 63 (360)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC-----------HHHH--HT-C----TT---S-----EEC--
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCC-----------Cccc--cc-C----CC---c-----ccc--
Confidence 346899999999999999999999999999999985421 1000 00 0 00 0 000
Q ss_pred CeeeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEec-eEEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEE
Q 009785 138 GNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTI 216 (526)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~-~v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV 216 (526)
..+ .+ ..+.+..+.+.|.+.+.+. +++++.+ +|+++..+++. .+++...+|+ ++++|+||
T Consensus 64 ------~~~--~~------~~~~~~~~~~~l~~~~~~~-~~~~~~~~~v~~i~~~~~~--~~~v~~~~g~--~~~~~~li 124 (360)
T 3ab1_A 64 ------DVA--GF------PEVPAIDLVESLWAQAERY-NPDVVLNETVTKYTKLDDG--TFETRTNTGN--VYRSRAVL 124 (360)
T ss_dssp ------CST--TC------SSEEHHHHHHHHHHHHHTT-CCEEECSCCEEEEEECTTS--CEEEEETTSC--EEEEEEEE
T ss_pred ------cCC--CC------CCCCHHHHHHHHHHHHHHh-CCEEEcCCEEEEEEECCCc--eEEEEECCCc--EEEeeEEE
Confidence 000 00 1245667888888888876 6888877 59998876542 2345566775 46799999
Q ss_pred EeecCCccccccccC
Q 009785 217 VCDGCFSNLRRSLCN 231 (526)
Q Consensus 217 ~ADG~~S~vR~~l~~ 231 (526)
.|+|.+|..++.+.+
T Consensus 125 ~AtG~~~~~~~~~~i 139 (360)
T 3ab1_A 125 IAAGLGAFEPRKLPQ 139 (360)
T ss_dssp ECCTTCSCCBCCCGG
T ss_pred EccCCCcCCCCCCCC
Confidence 999998876665543
No 74
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.11 E-value=6.2e-10 Score=108.40 Aligned_cols=113 Identities=19% Similarity=0.296 Sum_probs=81.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCe
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 139 (526)
.+||+|||||++|+++|..|+++|++|+|+|+++.. +. .. ..
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~-----~~-~~-----------------~~--------------- 43 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERR-----NR-FA-----------------SH--------------- 43 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCG-----GG-GC-----------------SC---------------
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcc-----cc-cc-----------------hh---------------
Confidence 479999999999999999999999999999997410 00 00 00
Q ss_pred eeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEee
Q 009785 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCD 219 (526)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~AD 219 (526)
...++ .........+...+.+.+.+.+++++..++|+++..+++. +.+...+|+ ++.+|.||.|+
T Consensus 44 --~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~---~~v~~~~g~--~~~~d~vviAt 108 (297)
T 3fbs_A 44 --SHGFL--------GQDGKAPGEIIAEARRQIERYPTIHWVEGRVTDAKGSFGE---FIVEIDGGR--RETAGRLILAM 108 (297)
T ss_dssp --CCSST--------TCTTCCHHHHHHHHHHHHTTCTTEEEEESCEEEEEEETTE---EEEEETTSC--EEEEEEEEECC
T ss_pred --hcCCc--------CCCCCCHHHHHHHHHHHHHhcCCeEEEEeEEEEEEEcCCe---EEEEECCCC--EEEcCEEEECC
Confidence 00011 0012345678888888888887899988889999887764 455667776 46799999999
Q ss_pred cCCccc
Q 009785 220 GCFSNL 225 (526)
Q Consensus 220 G~~S~v 225 (526)
|..+..
T Consensus 109 G~~~~~ 114 (297)
T 3fbs_A 109 GVTDEL 114 (297)
T ss_dssp CCEEEC
T ss_pred CCCCCC
Confidence 997654
No 75
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.10 E-value=1.1e-09 Score=118.37 Aligned_cols=62 Identities=15% Similarity=0.325 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEEcCeEEEeecCCccc
Q 009785 163 RFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKT-KAGEELTAYAPLTIVCDGCFSNL 225 (526)
Q Consensus 163 ~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~-~~G~~~~i~a~~vV~ADG~~S~v 225 (526)
.+...|.+.+.+. +++++.++ |+++..+++++.||.+.+ .+|+...++|+.||.|+|+++.+
T Consensus 159 ~l~~~L~~~a~~~-gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 222 (660)
T 2bs2_A 159 TMLFAVANECLKL-GVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRI 222 (660)
T ss_dssp HHHHHHHHHHHHH-TCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCCCGGG
T ss_pred HHHHHHHHHHHhC-CCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCcchhh
Confidence 5778888888876 79999885 999988888888988765 67877778999999999999965
No 76
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.10 E-value=5.6e-10 Score=110.92 Aligned_cols=124 Identities=21% Similarity=0.249 Sum_probs=83.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCe
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 139 (526)
++||+|||||++|+++|+.|++.|++|+|+|+++... +... .. . .... ++
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~g-----------g~~~--~~-~-------~~~~-----~~---- 54 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPG-----------GQLT--AL-Y-------PEKY-----IY---- 54 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSC-----------HHHH--HT-C-------TTSE-----EC----
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCC-----------Ceee--cc-C-------CCce-----ee----
Confidence 5899999999999999999999999999999985321 1000 00 0 0000 00
Q ss_pred eeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEec-eEEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEe
Q 009785 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVC 218 (526)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~-~v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~A 218 (526)
..+ .+ ..+.+..+.+.|.+.+.+. +++++.+ +|+++..+++ .+++...+|+ ++++|.||.|
T Consensus 55 ----~~~--~~------~~~~~~~~~~~l~~~~~~~-~~~~~~~~~v~~i~~~~~---~~~v~~~~g~--~~~~~~lv~A 116 (335)
T 2zbw_A 55 ----DVA--GF------PKVYAKDLVKGLVEQVAPF-NPVYSLGERAETLEREGD---LFKVTTSQGN--AYTAKAVIIA 116 (335)
T ss_dssp ----CST--TC------SSEEHHHHHHHHHHHHGGG-CCEEEESCCEEEEEEETT---EEEEEETTSC--EEEEEEEEEC
T ss_pred ----ccC--CC------CCCCHHHHHHHHHHHHHHc-CCEEEeCCEEEEEEECCC---EEEEEECCCC--EEEeCEEEEC
Confidence 000 00 0234567788888888776 5777766 5999887766 3455666675 3679999999
Q ss_pred ecCCccccccccC
Q 009785 219 DGCFSNLRRSLCN 231 (526)
Q Consensus 219 DG~~S~vR~~l~~ 231 (526)
+|.+|...+...+
T Consensus 117 tG~~~~~p~~~~i 129 (335)
T 2zbw_A 117 AGVGAFEPRRIGA 129 (335)
T ss_dssp CTTSEEEECCCCC
T ss_pred CCCCCCCCCCCCC
Confidence 9998866655543
No 77
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.09 E-value=2.5e-09 Score=106.69 Aligned_cols=36 Identities=28% Similarity=0.399 Sum_probs=32.9
Q ss_pred CcEEEECCCHHHHHHHHHHHh---CCCeEEEEecCCCCC
Q 009785 61 ADVIVVGAGVAGAALANTLAK---DGRRVHVIERDLSEP 96 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~---~G~~V~l~Er~~~~~ 96 (526)
+||+|||||++|+++|+.|++ .|++|+|+||+....
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~g 40 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSG 40 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSC
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCc
Confidence 589999999999999999999 999999999986543
No 78
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.09 E-value=7.3e-10 Score=108.73 Aligned_cols=114 Identities=16% Similarity=0.239 Sum_probs=75.5
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEEC
Q 009785 58 PFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKD 137 (526)
Q Consensus 58 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 137 (526)
+++|||+||||||+|++||+.|+|.|++|+|+|++.. .|. +. ... .
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~-----gg~-~~----------------~~~-----~------- 49 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTN-----RNR-VT----------------QNS-----H------- 49 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCC-----GGG-GS----------------SCB-----C-------
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC-----CCe-ee----------------eec-----C-------
Confidence 4569999999999999999999999999999998731 110 00 000 0
Q ss_pred CeeeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEE
Q 009785 138 GNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIV 217 (526)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~ 217 (526)
.++ .. . .+....+.+..++.+.+.+++.+...+++.+...++.. .++...+|++ +++|.||.
T Consensus 50 ------~~~-----~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~g~~--~~a~~lii 111 (304)
T 4fk1_A 50 ------GFI-----TR-D--GIKPEEFKEIGLNEVMKYPSVHYYEKTVVMITKQSTGL--FEIVTKDHTK--YLAERVLL 111 (304)
T ss_dssp ------CST-----TC-T--TBCHHHHHHHHHHHHTTSTTEEEEECCEEEEEECTTSC--EEEEETTCCE--EEEEEEEE
T ss_pred ------Ccc-----CC-C--CCCHHHHHHHHHHHHHhcCCEEEEeeEEEEeeecCCCc--EEEEECCCCE--EEeCEEEE
Confidence 000 00 0 12334566667777777778888888877776544322 3455677764 66999999
Q ss_pred eecCCc
Q 009785 218 CDGCFS 223 (526)
Q Consensus 218 ADG~~S 223 (526)
|+|...
T Consensus 112 ATGs~p 117 (304)
T 4fk1_A 112 ATGMQE 117 (304)
T ss_dssp CCCCEE
T ss_pred ccCCcc
Confidence 999753
No 79
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.08 E-value=6.3e-10 Score=111.24 Aligned_cols=129 Identities=13% Similarity=0.130 Sum_probs=82.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCe
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 139 (526)
++||+|||||++|+++|+.|+++|++|+|+|+++....... + .++.+.-... .
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~----~-----------~~~~~~~~~~------------~ 55 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQ----H-----------AWHSLHLFSP------------A 55 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGG----G-----------SCTTCBCSSC------------G
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCccc----C-----------CCCCcEecCc------------h
Confidence 48999999999999999999999999999999864321100 0 0000000000 0
Q ss_pred eeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEec-eEEEEEeeCCeEEEEE-EEeCCCcEEEEEcCeEEE
Q 009785 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQ-YKTKAGEELTAYAPLTIV 217 (526)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~-~v~~l~~~~~~v~gv~-v~~~~G~~~~i~a~~vV~ 217 (526)
....++..... .......++..+.+.|.+.+++. +++++.+ +|+++..+++. +. +.+++| ++++|.||.
T Consensus 56 -~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~v~~i~~~~~~---~~~v~~~~g---~~~~d~vV~ 126 (357)
T 4a9w_A 56 -GWSSIPGWPMP-ASQGPYPARAEVLAYLAQYEQKY-ALPVLRPIRVQRVSHFGER---LRVVARDGR---QWLARAVIS 126 (357)
T ss_dssp -GGSCCSSSCCC-CCSSSSCBHHHHHHHHHHHHHHT-TCCEECSCCEEEEEEETTE---EEEEETTSC---EEEEEEEEE
T ss_pred -hhhhCCCCCCC-CCccCCCCHHHHHHHHHHHHHHc-CCEEEcCCEEEEEEECCCc---EEEEEeCCC---EEEeCEEEE
Confidence 00000000000 01111235677888888888887 7888887 59999888774 44 556666 477999999
Q ss_pred eecCCcc
Q 009785 218 CDGCFSN 224 (526)
Q Consensus 218 ADG~~S~ 224 (526)
|+|.+|.
T Consensus 127 AtG~~~~ 133 (357)
T 4a9w_A 127 ATGTWGE 133 (357)
T ss_dssp CCCSGGG
T ss_pred CCCCCCC
Confidence 9999874
No 80
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.08 E-value=6e-10 Score=120.29 Aligned_cols=66 Identities=21% Similarity=0.176 Sum_probs=53.0
Q ss_pred echHHHHHHHHHHHcC-CCeEEEece-EEEEEeeCC---eEEEEEEEe-CCCcEEEEEcCeEEEeecCCccc
Q 009785 160 HNGRFVQRLREKAASL-PNVRLEQGT-VTSLLEEKG---TIKGVQYKT-KAGEELTAYAPLTIVCDGCFSNL 225 (526)
Q Consensus 160 ~~~~l~~~L~~~a~~~-~~v~i~~~~-v~~l~~~~~---~v~gv~v~~-~~G~~~~i~a~~vV~ADG~~S~v 225 (526)
....+...|.+.+.+. ++++++.++ ++++..+++ ++.||.+.+ .+|+...++|+.||.|+|+.+.+
T Consensus 164 ~G~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g~~ 235 (662)
T 3gyx_A 164 NGESYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAVNV 235 (662)
T ss_dssp EETSHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSS
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCccccc
Confidence 3456778888888775 378898885 899887766 899998765 67877789999999999999964
No 81
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.06 E-value=6.7e-10 Score=115.84 Aligned_cols=62 Identities=13% Similarity=0.150 Sum_probs=49.0
Q ss_pred hHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEeecCCcccccc
Q 009785 162 GRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFSNLRRS 228 (526)
Q Consensus 162 ~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~ADG~~S~vR~~ 228 (526)
..+.+.|.+.+++. +++++.++ | ++..+++.+.+|.+.+.+|+ +++|.||.|+|.+|.++..
T Consensus 119 ~~l~~~L~~~~~~~-gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g~---~~a~~VVlAtGg~~~~~~~ 181 (472)
T 2e5v_A 119 REIFNFLLKLAREE-GIPIIEDRLV-EIRVKDGKVTGFVTEKRGLV---EDVDKLVLATGGYSYLYEY 181 (472)
T ss_dssp HHHHHHHHHHHHHT-TCCEECCCEE-EEEEETTEEEEEEETTTEEE---CCCSEEEECCCCCGGGSSS
T ss_pred HHHHHHHHHHHHhC-CCEEEECcEE-EEEEeCCEEEEEEEEeCCCe---EEeeeEEECCCCCcccCcc
Confidence 46778888888654 89999886 8 99888888888877554443 5699999999999988654
No 82
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.04 E-value=1.5e-09 Score=117.56 Aligned_cols=65 Identities=14% Similarity=0.132 Sum_probs=51.2
Q ss_pred chHHHHHHHHHHHcCCCe-EEEece-EEEEEeeCC---eEEEEEEEe-CCCcEEEEEcCeEEEeecCCccc
Q 009785 161 NGRFVQRLREKAASLPNV-RLEQGT-VTSLLEEKG---TIKGVQYKT-KAGEELTAYAPLTIVCDGCFSNL 225 (526)
Q Consensus 161 ~~~l~~~L~~~a~~~~~v-~i~~~~-v~~l~~~~~---~v~gv~v~~-~~G~~~~i~a~~vV~ADG~~S~v 225 (526)
...+...|.+.+++.+++ +++.++ |+++..+++ +|.||.+.+ .+|+..+++|+.||.|+|++|..
T Consensus 150 g~~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~~~ 220 (643)
T 1jnr_A 150 GESYKPIIAEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGATLL 220 (643)
T ss_dssp ETTHHHHHHHHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSS
T ss_pred cHHHHHHHHHHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCccccc
Confidence 345677777777765468 888875 999988766 899998755 67776678999999999999964
No 83
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.00 E-value=2.2e-09 Score=111.37 Aligned_cols=157 Identities=18% Similarity=0.220 Sum_probs=84.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCC--eEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeee------
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGR--RVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFG------ 131 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~--~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~------ 131 (526)
.+||+||||||+|+++|..|++.|. +|+|+||++...... ....... ..+++..........+...
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~----~~~~~~~--~~~~ip~~~~~~~~~~~~~g~~~~~ 79 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVW----NYTSTLS--NKLPVPSTNPILTTEPIVGPAALPV 79 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTC----SCCSCCC--SCCCSSBCCTTCCCCCBCCSSSCCB
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCee----cCCCCCC--cccccccccccccccccccccccCC
Confidence 5899999999999999999999999 999999985432110 0000000 0000000000000000000
Q ss_pred --eEEEE----CCeeeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEec-eEEEEEeeCCeEEEEEEEe-C
Q 009785 132 --YALFK----DGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKT-K 203 (526)
Q Consensus 132 --~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~-~v~~l~~~~~~v~gv~v~~-~ 203 (526)
..++. +.......+....+... .....++..+.+.|.+.+.+. +..++++ +|+++..+++.+. |++.+ .
T Consensus 80 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~~~-~~~i~~~t~V~~v~~~~~~~~-V~~~~~~ 156 (447)
T 2gv8_A 80 YPSPLYRDLQTNTPIELMGYCDQSFKPQ-TLQFPHRHTIQEYQRIYAQPL-LPFIKLATDVLDIEKKDGSWV-VTYKGTK 156 (447)
T ss_dssp CCCCCCTTCBCSSCHHHHSCTTCCCCTT-CCSSCBHHHHHHHHHHHHGGG-GGGEECSEEEEEEEEETTEEE-EEEEESS
T ss_pred ccCchhhhhccCCCHHHhccCCCCCCCC-CCCCCCHHHHHHHHHHHHHHh-hCeEEeCCEEEEEEeCCCeEE-EEEeecC
Confidence 00000 00000001110000011 112346778888888888776 5566666 4999987776543 55544 2
Q ss_pred CCc-EEEEEcCeEEEeecCCccc
Q 009785 204 AGE-ELTAYAPLTIVCDGCFSNL 225 (526)
Q Consensus 204 ~G~-~~~i~a~~vV~ADG~~S~v 225 (526)
+|+ ..++.+|.||.|+|.+|.-
T Consensus 157 ~G~~~~~~~~d~VVvAtG~~s~p 179 (447)
T 2gv8_A 157 AGSPISKDIFDAVSICNGHYEVP 179 (447)
T ss_dssp TTCCEEEEEESEEEECCCSSSSB
T ss_pred CCCeeEEEEeCEEEECCCCCCCC
Confidence 365 4467899999999998853
No 84
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.00 E-value=3.1e-09 Score=104.34 Aligned_cols=115 Identities=17% Similarity=0.267 Sum_probs=79.9
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCC-eEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCe
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGR-RVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~-~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 139 (526)
+||+||||||+|+++|+.|++.|+ +|+|+|++. .. |..... ..+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~-~g----g~~~~~------------~~~------------------ 46 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGM-PG----GQITGS------------SEI------------------ 46 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSSS-TT----CGGGGC------------SCB------------------
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCCC-CC----cccccc------------ccc------------------
Confidence 799999999999999999999999 999999962 11 110000 000
Q ss_pred eeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEee
Q 009785 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCD 219 (526)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~AD 219 (526)
..++ .+ ...+++..+.+.|.+.+.+. +++++.++|+++..+++. +++...+|+ ++++|+||.|+
T Consensus 47 ---~~~~--~~-----~~~~~~~~~~~~l~~~~~~~-~v~~~~~~v~~i~~~~~~---~~v~~~~g~--~~~~~~vv~At 110 (311)
T 2q0l_A 47 ---ENYP--GV-----KEVVSGLDFMQPWQEQCFRF-GLKHEMTAVQRVSKKDSH---FVILAEDGK--TFEAKSVIIAT 110 (311)
T ss_dssp ---CCST--TC-----CSCBCHHHHHHHHHHHHHTT-SCEEECSCEEEEEEETTE---EEEEETTSC--EEEEEEEEECC
T ss_pred ---ccCC--CC-----cccCCHHHHHHHHHHHHHHc-CCEEEEEEEEEEEEcCCE---EEEEEcCCC--EEECCEEEECC
Confidence 0001 00 01245667888888888876 788888779999877663 344456665 46799999999
Q ss_pred cCCcccc
Q 009785 220 GCFSNLR 226 (526)
Q Consensus 220 G~~S~vR 226 (526)
|.++...
T Consensus 111 G~~~~~~ 117 (311)
T 2q0l_A 111 GGSPKRT 117 (311)
T ss_dssp CEEECCC
T ss_pred CCCCCCC
Confidence 9877543
No 85
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.99 E-value=8e-10 Score=109.73 Aligned_cols=121 Identities=18% Similarity=0.266 Sum_probs=81.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECC
Q 009785 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDG 138 (526)
Q Consensus 59 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 138 (526)
+.+||+|||||++|+++|+.|+++|++|+|+|+.+.......|. +... . .
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~-~~~~--------------~-----~---------- 70 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQ-LTTT--------------T-----E---------- 70 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCG-GGGS--------------S-----E----------
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcc-cccc--------------h-----h----------
Confidence 46899999999999999999999999999999975211111110 0000 0 0
Q ss_pred eeeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEe---CCCcEEEEEcCeE
Q 009785 139 NRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKT---KAGEELTAYAPLT 215 (526)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~v~~l~~~~~~v~gv~v~~---~~G~~~~i~a~~v 215 (526)
...++ .+ ...+.+..+...|.+.+.+. +++++.++|+++..+++.+ ++.. .++. ++.+|.|
T Consensus 71 ---~~~~~--~~-----~~~~~~~~~~~~~~~~~~~~-gv~i~~~~v~~i~~~~~~~---~v~~~~~~~~~--~~~~d~v 134 (338)
T 3itj_A 71 ---IENFP--GF-----PDGLTGSELMDRMREQSTKF-GTEIITETVSKVDLSSKPF---KLWTEFNEDAE--PVTTDAI 134 (338)
T ss_dssp ---ECCST--TC-----TTCEEHHHHHHHHHHHHHHT-TCEEECSCEEEEECSSSSE---EEEETTCSSSC--CEEEEEE
T ss_pred ---hcccC--CC-----cccCCHHHHHHHHHHHHHHc-CCEEEEeEEEEEEEcCCEE---EEEEEecCCCc--EEEeCEE
Confidence 00011 00 11245677888888888887 7899988888888776644 3433 2444 4679999
Q ss_pred EEeecCCccc
Q 009785 216 IVCDGCFSNL 225 (526)
Q Consensus 216 V~ADG~~S~v 225 (526)
|.|+|..+..
T Consensus 135 vlAtG~~~~~ 144 (338)
T 3itj_A 135 ILATGASAKR 144 (338)
T ss_dssp EECCCEEECC
T ss_pred EECcCCCcCC
Confidence 9999986543
No 86
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.97 E-value=6.2e-09 Score=104.20 Aligned_cols=33 Identities=27% Similarity=0.390 Sum_probs=31.2
Q ss_pred CcEEEECCCHHHHHHHHHHHhCC------CeEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDG------RRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G------~~V~l~Er~~ 93 (526)
+||+|||||++|+++|+.|+++| .+|+|+|+..
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 38999999999999999999998 9999999985
No 87
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.97 E-value=3.2e-09 Score=104.72 Aligned_cols=115 Identities=24% Similarity=0.315 Sum_probs=77.4
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEE
Q 009785 57 CPFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFK 136 (526)
Q Consensus 57 ~~~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~ 136 (526)
|+.++||+||||||+|+++|+.|+++|++|+|+|+.. . .|..... ..+
T Consensus 13 m~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~----gg~~~~~------------~~~--------------- 60 (319)
T 3cty_A 13 KERDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAV-A----GGLTAEA------------PLV--------------- 60 (319)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-T----TGGGGGC------------SCB---------------
T ss_pred ccCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC-C----Ccccccc------------chh---------------
Confidence 4456899999999999999999999999999999952 1 1110000 000
Q ss_pred CCeeeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEE
Q 009785 137 DGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTI 216 (526)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV 216 (526)
..++ .+ ..+.+..+.+.+.+.+.+. +++++.++|+++..+++.+ ++.. ++. ++.+|+||
T Consensus 61 ------~~~~--~~------~~~~~~~~~~~~~~~~~~~-~v~~~~~~v~~i~~~~~~~---~v~~-~~~--~~~~~~li 119 (319)
T 3cty_A 61 ------ENYL--GF------KSIVGSELAKLFADHAANY-AKIREGVEVRSIKKTQGGF---DIET-NDD--TYHAKYVI 119 (319)
T ss_dssp ------CCBT--TB------SSBCHHHHHHHHHHHHHTT-SEEEETCCEEEEEEETTEE---EEEE-SSS--EEEEEEEE
T ss_pred ------hhcC--CC------cccCHHHHHHHHHHHHHHc-CCEEEEeeEEEEEEeCCEE---EEEE-CCC--EEEeCEEE
Confidence 0001 00 1234456777888888776 7888887799988776643 3334 344 36799999
Q ss_pred EeecCCcc
Q 009785 217 VCDGCFSN 224 (526)
Q Consensus 217 ~ADG~~S~ 224 (526)
.|+|.++.
T Consensus 120 ~AtG~~~~ 127 (319)
T 3cty_A 120 ITTGTTHK 127 (319)
T ss_dssp ECCCEEEC
T ss_pred ECCCCCcc
Confidence 99998654
No 88
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.97 E-value=2.4e-09 Score=119.65 Aligned_cols=69 Identities=26% Similarity=0.322 Sum_probs=52.5
Q ss_pred ceeechHHHHHHHHHHHcCCCeEEEec-eEEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEeecCCccc-cccccC
Q 009785 157 RGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFSNL-RRSLCN 231 (526)
Q Consensus 157 ~~~~~~~l~~~L~~~a~~~~~v~i~~~-~v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~ADG~~S~v-R~~l~~ 231 (526)
..++...+...|.+.+++. +++++.+ +|+++..+++++.+|+ +.+| +++||.||.|+|.+|.. .+.++.
T Consensus 146 g~v~p~~l~~~L~~~a~~~-Gv~i~~~t~V~~i~~~~~~v~~V~--t~~G---~i~Ad~VV~AaG~~s~~l~~~~g~ 216 (830)
T 1pj5_A 146 GLASAARAVQLLIKRTESA-GVTYRGSTTVTGIEQSGGRVTGVQ--TADG---VIPADIVVSCAGFWGAKIGAMIGM 216 (830)
T ss_dssp EEECHHHHHHHHHHHHHHT-TCEEECSCCEEEEEEETTEEEEEE--ETTE---EEECSEEEECCGGGHHHHHHTTTC
T ss_pred ceEcHHHHHHHHHHHHHHc-CCEEECCceEEEEEEeCCEEEEEE--ECCc---EEECCEEEECCccchHHHHHHhCC
Confidence 3456778999999999987 7888877 4999998877665444 4556 47899999999999953 344444
No 89
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.96 E-value=3.4e-08 Score=103.13 Aligned_cols=62 Identities=16% Similarity=0.188 Sum_probs=47.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCC--CeEEEEecCCCCCCccc-----ce----------eeCcchHHHHHHcCCcchh
Q 009785 60 DADVIVVGAGVAGAALANTLAKDG--RRVHVIERDLSEPDRIV-----GE----------LLQPGGYLKLIELGLEDCV 121 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G--~~V~l~Er~~~~~~~~~-----g~----------~l~~~~~~~l~~lGl~~~l 121 (526)
.+||+|||||++||++|+.|+++| .+|+|+|++.....+.. |. ...+...+.++++|+.+.+
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~l~~~lg~~~~~ 82 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYREDGFTIERGPDSYVARKHILTDLIEAIGLGEKL 82 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEECSTTCCEESSCCCEETTSTHHHHHHHHTTCGGGE
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEeeCCEEEecCchhhhcccHHHHHHHHHcCCcceE
Confidence 479999999999999999999999 99999999765433211 10 1234566888999987654
No 90
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.95 E-value=3.9e-09 Score=103.97 Aligned_cols=112 Identities=21% Similarity=0.163 Sum_probs=77.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCe
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 139 (526)
.+||+|||||++|+++|+.|+++|++|+|+|++ . |..+.. . .
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~-----gg~~~~------------------~------------~- 56 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--P-----GGQLTE------------------A------------G- 56 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--T-----TGGGGG------------------C------------C-
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--C-----CCeecc------------------c------------c-
Confidence 589999999999999999999999999999997 1 111110 0 0
Q ss_pred eeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEee
Q 009785 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCD 219 (526)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~AD 219 (526)
....++ .+ ..+....+.+.+.+.+.+. +++++.++|+++..+++. +.+...+|. ++.+|.||.|+
T Consensus 57 -~~~~~~--~~------~~~~~~~~~~~~~~~~~~~-~v~~~~~~v~~i~~~~~~---~~v~~~~g~--~~~~d~lvlAt 121 (323)
T 3f8d_A 57 -IVDDYL--GL------IEIQASDMIKVFNKHIEKY-EVPVLLDIVEKIENRGDE---FVVKTKRKG--EFKADSVILGI 121 (323)
T ss_dssp -EECCST--TS------TTEEHHHHHHHHHHHHHTT-TCCEEESCEEEEEEC--C---EEEEESSSC--EEEEEEEEECC
T ss_pred -cccccC--CC------CCCCHHHHHHHHHHHHHHc-CCEEEEEEEEEEEecCCE---EEEEECCCC--EEEcCEEEECc
Confidence 000011 00 0145567888888888877 778877779999876653 445566665 46799999999
Q ss_pred cCCcc
Q 009785 220 GCFSN 224 (526)
Q Consensus 220 G~~S~ 224 (526)
|....
T Consensus 122 G~~~~ 126 (323)
T 3f8d_A 122 GVKRR 126 (323)
T ss_dssp CCEEC
T ss_pred CCCCc
Confidence 98753
No 91
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.94 E-value=3.6e-09 Score=104.69 Aligned_cols=115 Identities=18% Similarity=0.277 Sum_probs=76.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCe
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 139 (526)
.+||+||||||+|+++|+.|+++|++|+|+|+.. .. |. +... ..+
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~g----g~-~~~~-----------~~~------------------ 52 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGM-PG----GQ-IAWS-----------EEV------------------ 52 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TT----GG-GGGC-----------SCB------------------
T ss_pred cCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCC-CC----cc-cccc-----------ccc------------------
Confidence 5899999999999999999999999999999982 11 11 0000 000
Q ss_pred eeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEeceEEEEEee--CCeEEEEEEEeCCCcEEEEEcCeEEE
Q 009785 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEE--KGTIKGVQYKTKAGEELTAYAPLTIV 217 (526)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~v~~l~~~--~~~v~gv~v~~~~G~~~~i~a~~vV~ 217 (526)
..++ .+. ..+.+..+.+.+.+.+.+. +++++.++|+++..+ ++.. +++...+|+ ++++|+||.
T Consensus 53 ---~~~~--~~~-----~~~~~~~~~~~l~~~~~~~-gv~~~~~~v~~i~~~~~~~~~--~~v~~~~g~--~~~~~~vv~ 117 (325)
T 2q7v_A 53 ---ENFP--GFP-----EPIAGMELAQRMHQQAEKF-GAKVEMDEVQGVQHDATSHPY--PFTVRGYNG--EYRAKAVIL 117 (325)
T ss_dssp ---CCST--TCS-----SCBCHHHHHHHHHHHHHHT-TCEEEECCEEEEEECTTSSSC--CEEEEESSC--EEEEEEEEE
T ss_pred ---ccCC--CCC-----CCCCHHHHHHHHHHHHHHc-CCEEEeeeEEEEEeccCCCce--EEEEECCCC--EEEeCEEEE
Confidence 0001 000 0234567788888888877 788888789888765 3320 223344565 467999999
Q ss_pred eecCCcc
Q 009785 218 CDGCFSN 224 (526)
Q Consensus 218 ADG~~S~ 224 (526)
|+|.++.
T Consensus 118 AtG~~~~ 124 (325)
T 2q7v_A 118 ATGADPR 124 (325)
T ss_dssp CCCEEEC
T ss_pred CcCCCcC
Confidence 9998654
No 92
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.93 E-value=1.5e-09 Score=107.76 Aligned_cols=119 Identities=17% Similarity=0.223 Sum_probs=78.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCe
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 139 (526)
++||+||||||+|+++|+.|++.|++|+|+|+.........|. +. . .. . .
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~-~~-----------------~-~~-~-----~----- 57 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQ-LT-----------------T-TT-D-----V----- 57 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCG-GG-----------------G-CS-E-----E-----
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCce-ee-----------------e-cc-c-----c-----
Confidence 5899999999999999999999999999999831110011110 00 0 00 0 0
Q ss_pred eeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEee
Q 009785 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCD 219 (526)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~AD 219 (526)
..++ .+ ...+.+..+...|.+.+.+. +++++.++|+++..+++.+ ++.. +|. ++++|+||.|+
T Consensus 58 ---~~~~--~~-----~~~~~~~~~~~~l~~~~~~~-gv~~~~~~v~~i~~~~~~~---~v~~-~~~--~~~~~~vv~A~ 120 (333)
T 1vdc_A 58 ---ENFP--GF-----PEGILGVELTDKFRKQSERF-GTTIFTETVTKVDFSSKPF---KLFT-DSK--AILADAVILAI 120 (333)
T ss_dssp ---CCST--TC-----TTCEEHHHHHHHHHHHHHHT-TCEEECCCCCEEECSSSSE---EEEC-SSE--EEEEEEEEECC
T ss_pred ---ccCC--CC-----ccCCCHHHHHHHHHHHHHHC-CCEEEEeEEEEEEEcCCEE---EEEE-CCc--EEEcCEEEECC
Confidence 0011 00 11245667888888888776 7899888888887665543 3334 554 47799999999
Q ss_pred cCCccc
Q 009785 220 GCFSNL 225 (526)
Q Consensus 220 G~~S~v 225 (526)
|.++..
T Consensus 121 G~~~~~ 126 (333)
T 1vdc_A 121 GAVAKR 126 (333)
T ss_dssp CEEECC
T ss_pred CCCcCC
Confidence 998754
No 93
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.91 E-value=5.5e-09 Score=103.35 Aligned_cols=118 Identities=17% Similarity=0.179 Sum_probs=79.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCe
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 139 (526)
.+||+|||||++|+++|+.|+++|++|+|+|+.+... +.-. . .... . ..
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~g-----------G~~~--~-----~~~~---~-----~~----- 55 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLG-----------GQLS--A-----LYPE---K-----YI----- 55 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC-----------HHHH--H-----HCTT---S-----EE-----
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCC-----------ceeh--h-----cCCC---c-----eE-----
Confidence 4799999999999999999999999999999986421 1000 0 0000 0 00
Q ss_pred eeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEec-eEEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEe
Q 009785 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVC 218 (526)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~-~v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~A 218 (526)
..++ .+ ..+.+..+...|.+.+.+. +++++.+ +|+++..+++. .+.+...+|+ +.+|.||.|
T Consensus 56 ---~~~~--~~------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~i~~~~~~--~~~v~~~~g~---~~~d~vVlA 118 (332)
T 3lzw_A 56 ---YDVA--GF------PKIRAQELINNLKEQMAKF-DQTICLEQAVESVEKQADG--VFKLVTNEET---HYSKTVIIT 118 (332)
T ss_dssp ---CCST--TC------SSEEHHHHHHHHHHHHTTS-CCEEECSCCEEEEEECTTS--CEEEEESSEE---EEEEEEEEC
T ss_pred ---eccC--CC------CCCCHHHHHHHHHHHHHHh-CCcEEccCEEEEEEECCCC--cEEEEECCCE---EEeCEEEEC
Confidence 0011 00 0135567888888888877 7888876 59999876552 2345566664 679999999
Q ss_pred ecCCccc
Q 009785 219 DGCFSNL 225 (526)
Q Consensus 219 DG~~S~v 225 (526)
+|.+|..
T Consensus 119 tG~~~~~ 125 (332)
T 3lzw_A 119 AGNGAFK 125 (332)
T ss_dssp CTTSCCE
T ss_pred CCCCcCC
Confidence 9997643
No 94
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.89 E-value=5e-09 Score=102.93 Aligned_cols=120 Identities=17% Similarity=0.293 Sum_probs=75.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEEC
Q 009785 58 PFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKD 137 (526)
Q Consensus 58 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 137 (526)
+..|||+||||||||+++|+.|+++|++|+|+|+.... |. .+++. +... .. +
T Consensus 2 ~~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~g-----g~--~~~G~-----------~~~~--~~-----i--- 53 (314)
T 4a5l_A 2 SNIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAG-----GV--AAGGQ-----------LTTT--TI-----I--- 53 (314)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGG-----GC--CTTCG-----------GGGS--SE-----E---
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCC-----Cc--ccCCC-----------cCCh--HH-----h---
Confidence 34599999999999999999999999999999987421 11 01110 0000 00 0
Q ss_pred CeeeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEE
Q 009785 138 GNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIV 217 (526)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~ 217 (526)
..++ .+. ..+...++...+.+.+.+. ++++...++.....+.+.. .+...++. ++.+|.+|.
T Consensus 54 -----~~~~--g~~-----~~i~~~~l~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~---~~~~~~~~--~~~~~~lii 115 (314)
T 4a5l_A 54 -----ENFP--GFP-----NGIDGNELMMNMRTQSEKY-GTTIITETIDHVDFSTQPF---KLFTEEGK--EVLTKSVII 115 (314)
T ss_dssp -----CCST--TCT-----TCEEHHHHHHHHHHHHHHT-TCEEECCCEEEEECSSSSE---EEEETTCC--EEEEEEEEE
T ss_pred -----hhcc--CCc-----ccCCHHHHHHHHHHHHhhc-CcEEEEeEEEEeecCCCce---EEEECCCe--EEEEeEEEE
Confidence 0011 000 1234456777788888777 6778777777766555432 23345554 467999999
Q ss_pred eecCCc
Q 009785 218 CDGCFS 223 (526)
Q Consensus 218 ADG~~S 223 (526)
|+|...
T Consensus 116 ATG~~~ 121 (314)
T 4a5l_A 116 ATGATA 121 (314)
T ss_dssp CCCEEE
T ss_pred cccccc
Confidence 999743
No 95
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.89 E-value=7.8e-09 Score=109.80 Aligned_cols=140 Identities=23% Similarity=0.202 Sum_probs=80.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECC
Q 009785 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDG 138 (526)
Q Consensus 59 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 138 (526)
.++||+|||||++|+++|+.|++.|++|+|+|+++.....-. ..-.| |+.-.... ....+.+ .
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~-~~~~p---------g~~~d~~~----~~~~~~f--~- 77 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWY-WNRYP---------GARCDIES----IEYCYSF--S- 77 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHH-HCCCT---------TCBCSSCT----TTSSCCS--C-
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccc-ccCCC---------ceeecccc----ccccccc--C-
Confidence 368999999999999999999999999999999864321100 00000 00000000 0000000 0
Q ss_pred eeeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCC-CeEEEec-eEEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEE
Q 009785 139 NRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLP-NVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTI 216 (526)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~-~v~i~~~-~v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV 216 (526)
......+. .......+.++.+.|.+.+.+.+ ++.++++ +|+++..+++.. .+++...+|+ +++||+||
T Consensus 78 ~~~~~~~~-------~~~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~-~w~V~~~~G~--~~~ad~vV 147 (542)
T 1w4x_A 78 EEVLQEWN-------WTERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATN-TWTVDTNHGD--RIRARYLI 147 (542)
T ss_dssp HHHHHHCC-------CCBSSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTT-EEEEEETTCC--EEEEEEEE
T ss_pred hhhhhccC-------cccccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCC-eEEEEECCCC--EEEeCEEE
Confidence 00000000 00112356677777777776653 3566777 499988654311 2445566776 46799999
Q ss_pred EeecCCccc
Q 009785 217 VCDGCFSNL 225 (526)
Q Consensus 217 ~ADG~~S~v 225 (526)
.|+|.+|.-
T Consensus 148 ~AtG~~s~p 156 (542)
T 1w4x_A 148 MASGQLSVP 156 (542)
T ss_dssp ECCCSCCCC
T ss_pred ECcCCCCCC
Confidence 999998854
No 96
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.87 E-value=2e-08 Score=103.42 Aligned_cols=36 Identities=33% Similarity=0.494 Sum_probs=33.2
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEP 96 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~ 96 (526)
+||+|||||++|+++|+.|+++|.+|+|+|++....
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~G 37 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLG 37 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSB
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCcc
Confidence 799999999999999999999999999999976543
No 97
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.84 E-value=9e-09 Score=102.32 Aligned_cols=116 Identities=27% Similarity=0.347 Sum_probs=76.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEEC
Q 009785 58 PFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKD 137 (526)
Q Consensus 58 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 137 (526)
+..+||+||||||+|+++|+.|++.|++|+|+|+.. ..|..... . ..
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-----~gg~~~~~------------~---~~------------- 58 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTS-----FGGALMTT------------T---DV------------- 58 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSS-----CSCGGGSC------------S---CB-------------
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-----CCCceecc------------c---hh-------------
Confidence 346899999999999999999999999999999752 11110000 0 00
Q ss_pred CeeeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEE-EeCCCcEEEEEcCeEE
Q 009785 138 GNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQY-KTKAGEELTAYAPLTI 216 (526)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~v~~l~~~~~~v~gv~v-~~~~G~~~~i~a~~vV 216 (526)
..++ .+ ...+.+..+...|.+.+.+. +++++.++++++.. ++. +++ ...+|+ ++.+|.||
T Consensus 59 -----~~~~--~~-----~~~~~~~~~~~~l~~~~~~~-~v~~~~~~v~~i~~-~~~---~~v~~~~~g~--~~~~d~lv 119 (335)
T 2a87_A 59 -----ENYP--GF-----RNGITGPELMDEMREQALRF-GADLRMEDVESVSL-HGP---LKSVVTADGQ--THRARAVI 119 (335)
T ss_dssp -----CCST--TC-----TTCBCHHHHHHHHHHHHHHT-TCEEECCCEEEEEC-SSS---SEEEEETTSC--EEEEEEEE
T ss_pred -----hhcC--CC-----CCCCCHHHHHHHHHHHHHHc-CCEEEEeeEEEEEe-CCc---EEEEEeCCCC--EEEeCEEE
Confidence 0001 00 01234556777888877776 78998888888876 332 223 345665 46799999
Q ss_pred EeecCCccc
Q 009785 217 VCDGCFSNL 225 (526)
Q Consensus 217 ~ADG~~S~v 225 (526)
.|+|.++..
T Consensus 120 iAtG~~~~~ 128 (335)
T 2a87_A 120 LAMGAAARY 128 (335)
T ss_dssp ECCCEEECC
T ss_pred ECCCCCccC
Confidence 999987643
No 98
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.84 E-value=6.3e-09 Score=108.31 Aligned_cols=149 Identities=15% Similarity=0.229 Sum_probs=83.2
Q ss_pred CcEEEECCCHHHHHHHHHHHh---CCCe---EEEEecCCCCCCcccceeeCc-chHHHHHHcCCcchhhcccceeeeeeE
Q 009785 61 ADVIVVGAGVAGAALANTLAK---DGRR---VHVIERDLSEPDRIVGELLQP-GGYLKLIELGLEDCVEQIDAQRVFGYA 133 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~---~G~~---V~l~Er~~~~~~~~~g~~l~~-~~~~~l~~lGl~~~l~~~~~~~~~~~~ 133 (526)
+||+||||||+|+++|..|++ .|.+ |+|+|+.+....... ..+ .+. ...|+... . .....
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~---~~~~~g~---~~~g~~~~-----~-~~y~~- 69 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWN---YTWRTGL---DENGEPVH-----S-SMYRY- 69 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGS---CCSCCSB---CTTSSBCC-----C-CCCTT-
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEee---cCCCCCc---cccCCCCc-----C-ccccc-
Confidence 699999999999999999999 9999 999999864321100 000 000 00111000 0 00000
Q ss_pred EEECCeeeeecCCCcCCCC-----CcccceeechHHHHHHHHHHHcCCCeE--EEec-eEEEEEeeCC--eEEEEEEEe-
Q 009785 134 LFKDGNRTQISYPLEKFHS-----DVAGRGFHNGRFVQRLREKAASLPNVR--LEQG-TVTSLLEEKG--TIKGVQYKT- 202 (526)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~L~~~a~~~~~v~--i~~~-~v~~l~~~~~--~v~gv~v~~- 202 (526)
...+.......++ ++.. .......++..+.+.|.+.+.+. ++. ++++ +|+++..+++ .+ .|++.+
T Consensus 70 l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-gv~~~i~~~~~V~~v~~~~~~~~~-~V~~~~~ 145 (464)
T 2xve_A 70 LWSNGPKECLEFA--DYTFDEHFGKPIASYPPREVLWDYIKGRVEKA-GVRKYIRFNTAVRHVEFNEDSQTF-TVTVQDH 145 (464)
T ss_dssp CBCSSCGGGTCBT--TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHH-TCGGGEECSEEEEEEEEETTTTEE-EEEEEET
T ss_pred hhhcCChhhcccC--CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHc-CCcceEEeCCEEEEEEEcCCCCcE-EEEEEEc
Confidence 0000000000010 0000 00012346677888888888776 565 6666 5999987654 33 355554
Q ss_pred CCCcEEEEEcCeEEEeecCCcccc
Q 009785 203 KAGEELTAYAPLTIVCDGCFSNLR 226 (526)
Q Consensus 203 ~~G~~~~i~a~~vV~ADG~~S~vR 226 (526)
.+|+..++.+|.||.|+|.+|.-+
T Consensus 146 ~~g~~~~~~~d~VVvAtG~~s~p~ 169 (464)
T 2xve_A 146 TTDTIYSEEFDYVVCCTGHFSTPY 169 (464)
T ss_dssp TTTEEEEEEESEEEECCCSSSSBC
T ss_pred CCCceEEEEcCEEEECCCCCCCCc
Confidence 346555688999999999877544
No 99
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.83 E-value=7.3e-09 Score=102.05 Aligned_cols=114 Identities=13% Similarity=0.204 Sum_probs=76.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCe
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 139 (526)
.+||+||||||+|+++|+.|++.|++|+|+|+.. ..|.... .. ..
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-----~gg~~~~------------~~---~~--------------- 49 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARANLQPVLITGME-----KGGQLTT------------TT---EV--------------- 49 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCCEEECCSS-----TTGGGGG------------CS---BC---------------
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEccCC-----CCceEec------------ch---hh---------------
Confidence 5899999999999999999999999999999652 1111000 00 00
Q ss_pred eeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEee
Q 009785 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCD 219 (526)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~AD 219 (526)
..++ .+ ...+.+..+.+.+.+.+.+. +++++.++++++..+++.+. + ..+|. ++.+|+||.|+
T Consensus 50 ---~~~~--~~-----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~i~~~~~~~~---v-~~~~~--~~~~~~lv~At 112 (320)
T 1trb_A 50 ---ENWP--GD-----PNDLTGPLLMERMHEHATKF-ETEIIFDHINKVDLQNRPFR---L-NGDNG--EYTCDALIIAT 112 (320)
T ss_dssp ---CCST--TC-----CSSCBHHHHHHHHHHHHHHT-TCEEECCCEEEEECSSSSEE---E-EESSC--EEEEEEEEECC
T ss_pred ---hhCC--CC-----CCCCCHHHHHHHHHHHHHHC-CCEEEEeeeeEEEecCCEEE---E-EeCCC--EEEcCEEEECC
Confidence 0001 00 01134556777777777776 78998888888876655433 3 33454 36799999999
Q ss_pred cCCccc
Q 009785 220 GCFSNL 225 (526)
Q Consensus 220 G~~S~v 225 (526)
|..+..
T Consensus 113 G~~~~~ 118 (320)
T 1trb_A 113 GASARY 118 (320)
T ss_dssp CEEECC
T ss_pred CCCcCC
Confidence 987643
No 100
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.83 E-value=2.1e-08 Score=104.37 Aligned_cols=150 Identities=17% Similarity=0.171 Sum_probs=81.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCC-----CeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEE
Q 009785 60 DADVIVVGAGVAGAALANTLAKDG-----RRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYAL 134 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G-----~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~ 134 (526)
.+||+||||||+|+++|..|+++| .+|+|+|+.+...... +..+....+. ......+..... +...+.+
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~-~~~~~~~~~~----~~~~~~l~~~~~-p~~~~~~ 103 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHG-NTLVSQSELQ----ISFLKDLVSLRN-PTSPYSF 103 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSG-GGCCSSCBCS----SCTTSSSSTTTC-TTCTTSH
T ss_pred cCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcC-CCCCCCCcCC----cchhhccccccC-CCCCCCh
Confidence 589999999999999999999999 9999999997543211 1100000000 000000000000 0000000
Q ss_pred E----ECCeeeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEee--CCeEEEEEEE--eCCC
Q 009785 135 F----KDGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEE--KGTIKGVQYK--TKAG 205 (526)
Q Consensus 135 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~--~~~v~gv~v~--~~~G 205 (526)
. ..+.. ..++ ........+..+.+.|...+.+. ++.+++++ |+++..+ +++...+++. +.+|
T Consensus 104 ~~~l~~~~~~--~~~~------~~~~~~~~~~~~~~~l~~~~~~~-~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g 174 (463)
T 3s5w_A 104 VNYLHKHDRL--VDFI------NLGTFYPCRMEFNDYLRWVASHF-QEQSRYGEEVLRIEPMLSAGQVEALRVISRNADG 174 (463)
T ss_dssp HHHHHHTTCH--HHHH------HHCCSCCBHHHHHHHHHHHHTTC-TTTEEESEEEEEEEEEEETTEEEEEEEEEEETTS
T ss_pred hHhhhhcCce--eecc------cccCCCCCHHHHHHHHHHHHHHc-CCeEEeCCEEEEEEEecCCCceEEEEEEEecCCC
Confidence 0 00000 0000 00011235667888888877776 57777775 9888765 2443333444 4445
Q ss_pred cEEEEEcCeEEEeecCCcc
Q 009785 206 EELTAYAPLTIVCDGCFSN 224 (526)
Q Consensus 206 ~~~~i~a~~vV~ADG~~S~ 224 (526)
+..++++|.||.|+|....
T Consensus 175 ~~~~~~~d~lVlAtG~~p~ 193 (463)
T 3s5w_A 175 EELVRTTRALVVSPGGTPR 193 (463)
T ss_dssp CEEEEEESEEEECCCCEEC
T ss_pred ceEEEEeCEEEECCCCCCC
Confidence 5557889999999998544
No 101
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.82 E-value=1.6e-08 Score=106.99 Aligned_cols=135 Identities=16% Similarity=0.146 Sum_probs=82.6
Q ss_pred CCcEEEECCCHHHHHHHHHHH-hCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECC
Q 009785 60 DADVIVVGAGVAGAALANTLA-KDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDG 138 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La-~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 138 (526)
++||+|||||++|+++|+.|+ +.|++|+|+|+++......... ..-|....+ +...
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~----------~ypg~~~d~------~s~~------- 64 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWN----------RYPGALSDT------ESHL------- 64 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHC----------CCTTCEEEE------EGGG-------
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCccccc----------CCCCceecC------Ccce-------
Confidence 589999999999999999999 9999999999986432110000 000100000 0000
Q ss_pred eeeeecCCCcC---CCCCcccceeechHHHHHHHHHHHcCCCe--EEEec-eEEEEEeeCCeEEEEEEEeCCCcEEEEEc
Q 009785 139 NRTQISYPLEK---FHSDVAGRGFHNGRFVQRLREKAASLPNV--RLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYA 212 (526)
Q Consensus 139 ~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~L~~~a~~~~~v--~i~~~-~v~~l~~~~~~v~gv~v~~~~G~~~~i~a 212 (526)
..+.... ...........+.++.+.|.+.+.+. ++ .++++ +|+++..+++.. .+++...+|+ ++++
T Consensus 65 ----~~~~~~~~~~~~~~~~~~~~~~~ei~~~l~~~~~~~-g~~~~i~~~~~V~~i~~~~~~~-~~~V~~~~G~--~i~a 136 (540)
T 3gwf_A 65 ----YRFSFDRDLLQESTWKTTYITQPEILEYLEDVVDRF-DLRRHFKFGTEVTSALYLDDEN-LWEVTTDHGE--VYRA 136 (540)
T ss_dssp ----SSCCSCHHHHHHCCCSBSEEEHHHHHHHHHHHHHHT-TCGGGEEESCCEEEEEEETTTT-EEEEEETTSC--EEEE
T ss_pred ----eeeccccccccCCCCcccCCCHHHHHHHHHHHHHHc-CCcceeEeccEEEEEEEeCCCC-EEEEEEcCCC--EEEe
Confidence 0000000 00001112356778888888888887 45 66666 599988665411 2455667786 4679
Q ss_pred CeEEEeecCCccc
Q 009785 213 PLTIVCDGCFSNL 225 (526)
Q Consensus 213 ~~vV~ADG~~S~v 225 (526)
|+||.|+|.+|.-
T Consensus 137 d~lV~AtG~~s~p 149 (540)
T 3gwf_A 137 KYVVNAVGLLSAI 149 (540)
T ss_dssp EEEEECCCSCCSB
T ss_pred CEEEECCcccccC
Confidence 9999999998753
No 102
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.82 E-value=1.1e-08 Score=100.39 Aligned_cols=114 Identities=25% Similarity=0.326 Sum_probs=76.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCe
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 139 (526)
++||+||||||+|+++|+.|++.|++|+|+|+... |.... .. .+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~g------G~~~~-----------------~~--------~~----- 44 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGERFG------GQILD-----------------TV--------DI----- 44 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSTT------GGGGG-----------------CC--------EE-----
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCC------ceecc-----------------cc--------cc-----
Confidence 37999999999999999999999999999986421 11000 00 00
Q ss_pred eeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEec-eEEEEEeeC--CeEEEEEEEeCCCcEEEEEcCeEE
Q 009785 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEK--GTIKGVQYKTKAGEELTAYAPLTI 216 (526)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~-~v~~l~~~~--~~v~gv~v~~~~G~~~~i~a~~vV 216 (526)
..+. . .....+..+.+.+.+.+.+. +++++.+ +|+.+..+. +. .+.+..++|+ ++.+|.+|
T Consensus 45 ---~~~~-----~---~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~v~~i~~~~~~~~--~~~v~~~~g~--~~~~~~lv 108 (310)
T 1fl2_A 45 ---ENYI-----S---VPKTEGQKLAGALKVHVDEY-DVDVIDSQSASKLIPAAVEGG--LHQIETASGA--VLKARSII 108 (310)
T ss_dssp ---CCBT-----T---BSSEEHHHHHHHHHHHHHTS-CEEEECSCCEEEEECCSSTTC--CEEEEETTSC--EEEEEEEE
T ss_pred ---cccc-----C---cCCCCHHHHHHHHHHHHHHc-CCeEEccCEEEEEEecccCCc--eEEEEECCCC--EEEeCEEE
Confidence 0000 0 00124556778888888776 7999998 699887542 11 1344556675 36799999
Q ss_pred EeecCCccc
Q 009785 217 VCDGCFSNL 225 (526)
Q Consensus 217 ~ADG~~S~v 225 (526)
.|+|.++..
T Consensus 109 ~AtG~~~~~ 117 (310)
T 1fl2_A 109 VATGAKWRN 117 (310)
T ss_dssp ECCCEEECC
T ss_pred ECcCCCcCC
Confidence 999987643
No 103
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.81 E-value=1.3e-08 Score=102.29 Aligned_cols=134 Identities=18% Similarity=0.210 Sum_probs=77.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCC-eEEEEecCCCCCCcccceee-CcchHHHHHHcCCcchhhcccceeeeeeEEEEC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGR-RVHVIERDLSEPDRIVGELL-QPGGYLKLIELGLEDCVEQIDAQRVFGYALFKD 137 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~-~V~l~Er~~~~~~~~~g~~l-~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 137 (526)
++||+|||||++|+++|..|++.|. +|+|+|+++ .. |... .+.... + +.........+.
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~G----g~~~~~~~~~~------~---~~~~~~~~~~g~----- 64 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VG----HSFKHWPKSTR------T---ITPSFTSNGFGM----- 64 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TT----HHHHTSCTTCB------C---SSCCCCCGGGTC-----
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CC----CccccCccccc------c---cCcchhcccCCc-----
Confidence 5899999999999999999999999 999999985 11 1000 000000 0 000000000000
Q ss_pred CeeeeecCCCcCCCCC----cccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEc
Q 009785 138 GNRTQISYPLEKFHSD----VAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYA 212 (526)
Q Consensus 138 ~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a 212 (526)
..+........ .....+.+..+...|.+.+.+. +++++.++ |+++..+++. +++...+|+ +.+
T Consensus 65 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-gv~i~~~~~v~~i~~~~~~---~~v~~~~g~---~~~ 132 (369)
T 3d1c_A 65 -----PDMNAISMDTSPAFTFNEEHISGETYAEYLQVVANHY-ELNIFENTVVTNISADDAY---YTIATTTET---YHA 132 (369)
T ss_dssp -----CCTTCSSTTCCHHHHHCCSSCBHHHHHHHHHHHHHHT-TCEEECSCCEEEEEECSSS---EEEEESSCC---EEE
T ss_pred -----hhhhhccccccccccccccCCCHHHHHHHHHHHHHHc-CCeEEeCCEEEEEEECCCe---EEEEeCCCE---EEe
Confidence 00000000000 0011234456777777777776 78888885 9998876553 344555553 679
Q ss_pred CeEEEeecCCcc
Q 009785 213 PLTIVCDGCFSN 224 (526)
Q Consensus 213 ~~vV~ADG~~S~ 224 (526)
|.||.|+|.++.
T Consensus 133 d~vVlAtG~~~~ 144 (369)
T 3d1c_A 133 DYIFVATGDYNF 144 (369)
T ss_dssp EEEEECCCSTTS
T ss_pred CEEEECCCCCCc
Confidence 999999999864
No 104
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.74 E-value=1.6e-08 Score=105.75 Aligned_cols=37 Identities=32% Similarity=0.503 Sum_probs=33.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC
Q 009785 58 PFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (526)
Q Consensus 58 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~ 94 (526)
+.++||+|||||++|+++|+.|++.|.+|+|+|+++.
T Consensus 4 ~~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~ 40 (482)
T 1ojt_A 4 DAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKT 40 (482)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 3468999999999999999999999999999999754
No 105
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.74 E-value=4.3e-08 Score=102.31 Aligned_cols=62 Identities=27% Similarity=0.385 Sum_probs=46.1
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCC--eEEEEecCCCCCCcccc------e-------eeCc------chHHHHHHcCCcc
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGR--RVHVIERDLSEPDRIVG------E-------LLQP------GGYLKLIELGLED 119 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~--~V~l~Er~~~~~~~~~g------~-------~l~~------~~~~~l~~lGl~~ 119 (526)
+||+|||||++||++|+.|+++|. +|+|+|++.....+..+ . .+.+ ...+.++++|+.+
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t~~~~~g~~~d~G~~~~~~~~~~~~~~~~l~~~lgl~~ 82 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPRGIRPAGALGARTLLLVSELGLDS 82 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCEEECTTSCEEESSCCCBCCCHHHHHHHHHHHHHTTCGG
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEEEeccCCeEEEeCCCcccCCCcccHHHHHHHHHcCCcc
Confidence 699999999999999999999999 99999998655433211 1 1111 1347788999876
Q ss_pred hhh
Q 009785 120 CVE 122 (526)
Q Consensus 120 ~l~ 122 (526)
.+.
T Consensus 83 ~~~ 85 (477)
T 3nks_A 83 EVL 85 (477)
T ss_dssp GEE
T ss_pred eee
Confidence 544
No 106
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.73 E-value=6.7e-09 Score=108.19 Aligned_cols=143 Identities=19% Similarity=0.154 Sum_probs=79.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcc---hHHHHHHcCCcchhh-cccceeeeeeEEE
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPG---GYLKLIELGLEDCVE-QIDAQRVFGYALF 135 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~---~~~~l~~lGl~~~l~-~~~~~~~~~~~~~ 135 (526)
++||+||||||+|+++|+.|++.|++|+|+|++. .. |..++.+ ....+...++.+.+. .... .+..
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~~-~g----G~~~~~g~~psk~ll~~~~~~~~~~~~~~~---~g~~-- 72 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKY-WG----GVCLNVGCIPSKALLRNAELVHIFTKDAKA---FGIS-- 72 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC-TT----HHHHHHSHHHHHHHHHHHHHHHHHHHHTTT---TTEE--
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC-CC----CcccccCchhhHHHHHHHHHHHHHHHHHHh---cCCC--
Confidence 4899999999999999999999999999999972 11 2112111 222333333333322 1100 1111
Q ss_pred ECCeeeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEEcCeE
Q 009785 136 KDGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAYAPLT 215 (526)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~v 215 (526)
... ...+. .... .... ....+.+.+.+.+.+. +++++.++... .+++ .+++...+|+..++++|.+
T Consensus 73 ~~~---~~~~~--~~~~-~~~~--~~~~l~~~l~~~~~~~-gv~~~~g~~~~--id~~---~v~V~~~~G~~~~~~~d~l 138 (464)
T 2a8x_A 73 GEV---TFDYG--IAYD-RSRK--VAEGRVAGVHFLMKKN-KITEIHGYGTF--ADAN---TLLVDLNDGGTESVTFDNA 138 (464)
T ss_dssp ECC---EECHH--HHHH-HHHH--HHHHHHHHHHHHHHHT-TCEEECEEEEE--SSSS---EEEEEETTSCCEEEEEEEE
T ss_pred CCC---ccCHH--HHHH-HHHH--HHHHHHHHHHHHHHhC-CCEEEEeEEEE--ecCC---eEEEEeCCCceEEEEcCEE
Confidence 000 00000 0000 0000 0123445566666664 89999887433 2334 3556666774346789999
Q ss_pred EEeecCCcccc
Q 009785 216 IVCDGCFSNLR 226 (526)
Q Consensus 216 V~ADG~~S~vR 226 (526)
|.|+|.++.+.
T Consensus 139 ViAtG~~~~~~ 149 (464)
T 2a8x_A 139 IIATGSSTRLV 149 (464)
T ss_dssp EECCCEEECCC
T ss_pred EECCCCCCCCC
Confidence 99999987543
No 107
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.72 E-value=3.5e-08 Score=104.62 Aligned_cols=135 Identities=21% Similarity=0.219 Sum_probs=81.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECC
Q 009785 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDG 138 (526)
Q Consensus 59 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 138 (526)
.++||+|||||++|+++|+.|++.|++|+|+|+++.....-. .-+.-|....+.. ..
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~----------~~~ypg~~~dv~s------~~------- 76 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWY----------WNRYPGARCDVES------ID------- 76 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHH----------HCCCTTCBCSSCT------TT-------
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccc----------cCCCCCceeCCCc------hh-------
Confidence 368999999999999999999999999999999864321100 0000011000000 00
Q ss_pred eeeeecCCCcC---CCCCcccceeechHHHHHHHHHHHcCCCe--EEEec-eEEEEEeeCCeEEEEEEEeCCCcEEEEEc
Q 009785 139 NRTQISYPLEK---FHSDVAGRGFHNGRFVQRLREKAASLPNV--RLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYA 212 (526)
Q Consensus 139 ~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~L~~~a~~~~~v--~i~~~-~v~~l~~~~~~v~gv~v~~~~G~~~~i~a 212 (526)
..+.... ...........+.++.+.|.+.+.+. ++ .++.+ +|+++..+++.. .+++...+|+ ++++
T Consensus 77 ----y~~~f~~~~~~~~~~~~~~~~~~ei~~yl~~~~~~~-g~~~~i~~~~~V~~i~~~~~~~-~w~V~~~~G~--~i~a 148 (549)
T 4ap3_A 77 ----YSYSFSPELEQEWNWSEKYATQPEILAYLEHVADRF-DLRRDIRFDTRVTSAVLDEEGL-RWTVRTDRGD--EVSA 148 (549)
T ss_dssp ----SSCCSCHHHHHHCCCSSSSCBHHHHHHHHHHHHHHT-TCGGGEECSCCEEEEEEETTTT-EEEEEETTCC--EEEE
T ss_pred ----cccccccccccCCCCccCCCCHHHHHHHHHHHHHHc-CCCccEEECCEEEEEEEcCCCC-EEEEEECCCC--EEEe
Confidence 0000000 00000112235667888888888877 44 66777 599988665421 2455667786 4679
Q ss_pred CeEEEeecCCcc
Q 009785 213 PLTIVCDGCFSN 224 (526)
Q Consensus 213 ~~vV~ADG~~S~ 224 (526)
|+||.|+|..|.
T Consensus 149 d~lV~AtG~~s~ 160 (549)
T 4ap3_A 149 RFLVVAAGPLSN 160 (549)
T ss_dssp EEEEECCCSEEE
T ss_pred CEEEECcCCCCC
Confidence 999999998764
No 108
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.69 E-value=3.3e-08 Score=104.77 Aligned_cols=137 Identities=17% Similarity=0.105 Sum_probs=78.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCe
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 139 (526)
++||+|||||++|+++|+.|++.|++|+|+|+++.....-. ..-.| |..-.. +...+.
T Consensus 9 ~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~-~~~yP---------g~~~d~------~~~~y~------ 66 (545)
T 3uox_A 9 ALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWY-WNRYP---------GCRLDT------ESYAYG------ 66 (545)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHH-HCCCT---------TCBCSS------CHHHHC------
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccc-cCCCC---------ceeecC------chhhcc------
Confidence 58999999999999999999999999999999864321100 00000 000000 000000
Q ss_pred eeeecCCCcCC-CCCcccceeechHHHHHHHHHHHcCCCe--EEEec-eEEEEEeeCCeEEEEEEEeCCCcEEEEEcCeE
Q 009785 140 RTQISYPLEKF-HSDVAGRGFHNGRFVQRLREKAASLPNV--RLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLT 215 (526)
Q Consensus 140 ~~~~~~~~~~~-~~~~~~~~~~~~~l~~~L~~~a~~~~~v--~i~~~-~v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~v 215 (526)
..+..... ..........+.++...+.+.+.+. ++ .++++ +|+++..+++.. .+++...+|+ ++++|+|
T Consensus 67 ---~~f~~~~~~~~~~~~~~~~~~ei~~yl~~~~~~~-~l~~~i~~~~~V~~~~~~~~~~-~w~V~~~~G~--~~~ad~l 139 (545)
T 3uox_A 67 ---YFALKGIIPEWEWSENFASQPEMLRYVNRAADAM-DVRKHYRFNTRVTAARYVENDR-LWEVTLDNEE--VVTCRFL 139 (545)
T ss_dssp ---HHHHTTSSTTCCCSBSSCBHHHHHHHHHHHHHHH-TCGGGEECSCCEEEEEEEGGGT-EEEEEETTTE--EEEEEEE
T ss_pred ---cccCcccccCCCccccCCCHHHHHHHHHHHHHHc-CCcCcEEECCEEEEEEEeCCCC-EEEEEECCCC--EEEeCEE
Confidence 00000000 0001112235667777787777765 33 56666 588887654311 2455667786 4679999
Q ss_pred EEeecCCccc
Q 009785 216 IVCDGCFSNL 225 (526)
Q Consensus 216 V~ADG~~S~v 225 (526)
|.|+|..|.-
T Consensus 140 V~AtG~~s~p 149 (545)
T 3uox_A 140 ISATGPLSAS 149 (545)
T ss_dssp EECCCSCBC-
T ss_pred EECcCCCCCC
Confidence 9999987743
No 109
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.68 E-value=7e-08 Score=94.73 Aligned_cols=33 Identities=33% Similarity=0.512 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERD 92 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~ 92 (526)
+|||+||||||||+++|+.|++.|++|+|+||+
T Consensus 6 ~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~ 38 (312)
T 4gcm_A 6 DFDIAIIGAGPAGMTAAVYASRANLKTVMIERG 38 (312)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEecC
Confidence 699999999999999999999999999999986
No 110
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.68 E-value=4.5e-08 Score=102.06 Aligned_cols=144 Identities=15% Similarity=0.114 Sum_probs=76.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhc-ccceeeeeeEEEECC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQ-IDAQRVFGYALFKDG 138 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~-~~~~~~~~~~~~~~~ 138 (526)
++||+||||||+|+++|..|++.|.+|+|+|+++............| ....+....+.+.+.. .. ..+.. ...
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p-~k~l~~~~~~~~~~~~~~~---~~g~~--~~~ 79 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIP-SKALLHSSHMYHEAKHSFA---NHGVK--VSN 79 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHH-HHHHHHHHHHHHHHHHTHH---HHTEE--ESC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccc-hHHHHHHHHHHHHHHHHHH---hcCcc--cCC
Confidence 58999999999999999999999999999999864322211000011 1111111111111110 00 00110 000
Q ss_pred eeeeecCCCcCCCCCcccceee-----chHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEEcC
Q 009785 139 NRTQISYPLEKFHSDVAGRGFH-----NGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAYAP 213 (526)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~-----~~~l~~~L~~~a~~~~~v~i~~~~v~~l~~~~~~v~gv~v~~~~G~~~~i~a~ 213 (526)
.. ..+ ...+. ...+...+.+.+.+. +++++.++++.+ +.+ .+++.+.+|+..++++|
T Consensus 80 ~~--~~~----------~~~~~~~~~~~~~l~~~~~~~~~~~-gv~~~~g~~~~~--~~~---~~~v~~~~G~~~~i~~d 141 (470)
T 1dxl_A 80 VE--IDL----------AAMMGQKDKAVSNLTRGIEGLFKKN-KVTYVKGYGKFV--SPS---EISVDTIEGENTVVKGK 141 (470)
T ss_dssp EE--ECH----------HHHHHHHHHHHHHHHHHHHHHHHHH-TCEEEESCEEEE--ETT---EEEECCSSSCCEEEECS
T ss_pred Cc--cCH----------HHHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEeEEEEe--cCC---EEEEEeCCCceEEEEcC
Confidence 00 000 00001 112333445555554 789998875443 344 35555666743468899
Q ss_pred eEEEeecCCccccc
Q 009785 214 LTIVCDGCFSNLRR 227 (526)
Q Consensus 214 ~vV~ADG~~S~vR~ 227 (526)
.+|.|+|.++.+-.
T Consensus 142 ~lIiAtGs~p~~p~ 155 (470)
T 1dxl_A 142 HIIIATGSDVKSLP 155 (470)
T ss_dssp EEEECCCEEECCBT
T ss_pred EEEECCCCCCCCCC
Confidence 99999998776543
No 111
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.67 E-value=1.1e-08 Score=106.84 Aligned_cols=36 Identities=28% Similarity=0.349 Sum_probs=33.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC
Q 009785 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (526)
Q Consensus 59 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~ 94 (526)
.++||+||||||+|+++|+.|+++|++|+|+|+++.
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~ 39 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGK 39 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 358999999999999999999999999999999643
No 112
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.66 E-value=3.9e-08 Score=102.42 Aligned_cols=36 Identities=36% Similarity=0.354 Sum_probs=33.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC
Q 009785 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (526)
Q Consensus 59 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~ 94 (526)
.++||+||||||+|+++|..|++.|.+|+|+||+..
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~ 38 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGE 38 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSS
T ss_pred ccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCC
Confidence 368999999999999999999999999999998753
No 113
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.65 E-value=7.3e-08 Score=101.75 Aligned_cols=115 Identities=24% Similarity=0.327 Sum_probs=76.9
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEEC
Q 009785 58 PFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKD 137 (526)
Q Consensus 58 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 137 (526)
+..+||+||||||+|+++|+.|++.|++|+|+|+.. .|.... ..++.
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~------GG~~~~--------~~~~~------------------- 256 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERF------GGQVLD--------TVDIE------------------- 256 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSST------TGGGTT--------CSCBC-------------------
T ss_pred cCcccEEEECCcHHHHHHHHHHHhCCCeEEEEECCC------CCcccc--------ccccc-------------------
Confidence 346899999999999999999999999999998642 111000 00000
Q ss_pred CeeeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEec-eEEEEEeeC--CeEEEEEEEeCCCcEEEEEcCe
Q 009785 138 GNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEK--GTIKGVQYKTKAGEELTAYAPL 214 (526)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~-~v~~l~~~~--~~v~gv~v~~~~G~~~~i~a~~ 214 (526)
.+. .. ....+..+...|.+.+.+. +++++.+ +|+++..+. +. .+++...+|. ++++|.
T Consensus 257 ------~~~-----~~---~~~~~~~l~~~l~~~~~~~-gv~v~~~~~v~~i~~~~~~~~--~~~V~~~~g~--~~~~d~ 317 (521)
T 1hyu_A 257 ------NYI-----SV---PKTEGQKLAGALKAHVSDY-DVDVIDSQSASKLVPAATEGG--LHQIETASGA--VLKARS 317 (521)
T ss_dssp ------CBT-----TB---SSBCHHHHHHHHHHHHHTS-CEEEECSCCEEEEECCSSTTS--CEEEEETTSC--EEEEEE
T ss_pred ------ccC-----CC---CCCCHHHHHHHHHHHHHHc-CCEEEcCCEEEEEEeccCCCc--eEEEEECCCC--EEEcCE
Confidence 000 00 0123456778888888776 7999998 599986431 21 1344556775 467999
Q ss_pred EEEeecCCcc
Q 009785 215 TIVCDGCFSN 224 (526)
Q Consensus 215 vV~ADG~~S~ 224 (526)
||.|+|.++.
T Consensus 318 vVlAtG~~~~ 327 (521)
T 1hyu_A 318 IIIATGAKWR 327 (521)
T ss_dssp EEECCCEEEC
T ss_pred EEECCCCCcC
Confidence 9999998654
No 114
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.64 E-value=8e-08 Score=100.29 Aligned_cols=63 Identities=24% Similarity=0.347 Sum_probs=48.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccce------------ee---CcchHHHHHHcCCcchhh
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGE------------LL---QPGGYLKLIELGLEDCVE 122 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~------------~l---~~~~~~~l~~lGl~~~l~ 122 (526)
++||+|||||++||++|+.|+++|++|+|+|++.....+.... .+ .+...+.++++|+.+.+.
T Consensus 16 ~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~~~g~~~~~~~~~~~~~~~~~~gl~~~~~ 93 (478)
T 2ivd_A 16 GMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHALAGYLVEQGPNSFLDREPATRALAAALNLEGRIR 93 (478)
T ss_dssp -CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEEETTEEEESSCCCEETTCHHHHHHHHHTTCGGGEE
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeeccCCeeeecChhhhhhhhHHHHHHHHHcCCcceee
Confidence 5899999999999999999999999999999997655432211 01 345668899999875443
No 115
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.64 E-value=1e-07 Score=102.52 Aligned_cols=52 Identities=12% Similarity=0.231 Sum_probs=41.9
Q ss_pred CCeEEEece-EEEEEeeC--CeEEEEEEEe-CCCcEEEEEcCeEEEeecCCccccc
Q 009785 176 PNVRLEQGT-VTSLLEEK--GTIKGVQYKT-KAGEELTAYAPLTIVCDGCFSNLRR 227 (526)
Q Consensus 176 ~~v~i~~~~-v~~l~~~~--~~v~gv~v~~-~~G~~~~i~a~~vV~ADG~~S~vR~ 227 (526)
++++++.++ |+++..++ +++.+|++.+ .+|+..++.||.||.|.|.....+-
T Consensus 273 ~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~l 328 (623)
T 3pl8_A 273 ERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQL 328 (623)
T ss_dssp EEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHH
T ss_pred CCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHH
Confidence 368888885 89998764 3788999987 5788788999999999998776543
No 116
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.64 E-value=3e-07 Score=97.05 Aligned_cols=61 Identities=33% Similarity=0.345 Sum_probs=46.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCccc------c-------eeeC---cchHHHHHHcCCcc
Q 009785 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIV------G-------ELLQ---PGGYLKLIELGLED 119 (526)
Q Consensus 59 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~------g-------~~l~---~~~~~~l~~lGl~~ 119 (526)
.++||+|||||++||++|..|+++|++|+|+|+++....+.. | ..+. +...+.++++|+..
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~~ 79 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPTQNRILRLAKELGLET 79 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCTTTSCEESSCCEECTTCHHHHHHHHHTTCCE
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccCCCcccccCceEecCCcHHHHHHHHHcCCcc
Confidence 357999999999999999999999999999999876543321 1 1122 33456778888764
No 117
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.64 E-value=3.9e-07 Score=95.56 Aligned_cols=62 Identities=19% Similarity=0.259 Sum_probs=47.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccce------------e---eCcchHHHHHHcCCcchh
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGE------------L---LQPGGYLKLIELGLEDCV 121 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~------------~---l~~~~~~~l~~lGl~~~l 121 (526)
++||+|||||++||++|+.|+++|++|+|+|+++....+.... . ..+...+.++++|+.+.+
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~d~G~~~~~~~~~~~~~~l~~lgl~~~~ 115 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSNIDGYPYEMGGTWVHWHQSHVWREITRYKMHNAL 115 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCEEEETTEEEECSCCCBCTTSHHHHHHHHHTTCTTCE
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcceecccCCeeecCCCeEecCccHHHHHHHHHcCCccee
Confidence 4899999999999999999999999999999997655432211 1 234566778888985443
No 118
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.62 E-value=1.6e-07 Score=91.97 Aligned_cols=112 Identities=21% Similarity=0.381 Sum_probs=73.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEE-EecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHV-IERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDG 138 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l-~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 138 (526)
.+||+|||||++|+++|..|+++|++|+| +||.. . .|...... .
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~~-~----gG~~~~~~---------------~--------------- 48 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGM-P----GGQITSSS---------------E--------------- 48 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSSS-T----TGGGGGCS---------------C---------------
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCC-C----Cceeeeec---------------e---------------
Confidence 47999999999999999999999999999 99942 1 11100000 0
Q ss_pred eeeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEeceEEEEEeeC--CeEEEEEEEeCCCcEEEEEcCeEE
Q 009785 139 NRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEK--GTIKGVQYKTKAGEELTAYAPLTI 216 (526)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~v~~l~~~~--~~v~gv~v~~~~G~~~~i~a~~vV 216 (526)
...++ .. ...+....+...+.+.+.+. +++++.++|+++ .++ +.+. +.+.+ +. ++.+|.||
T Consensus 49 ---~~~~~--~~-----~~~~~~~~~~~~~~~~~~~~-~v~~~~~~v~~i-~~~~~~~~~-v~~~~--~~--~~~~d~lv 111 (315)
T 3r9u_A 49 ---IENYP--GV-----AQVMDGISFMAPWSEQCMRF-GLKHEMVGVEQI-LKNSDGSFT-IKLEG--GK--TELAKAVI 111 (315)
T ss_dssp ---BCCST--TC-----CSCBCHHHHHHHHHHHHTTT-CCEEECCCEEEE-EECTTSCEE-EEETT--SC--EEEEEEEE
T ss_pred ---eccCC--CC-----CCCCCHHHHHHHHHHHHHHc-CcEEEEEEEEEE-ecCCCCcEE-EEEec--CC--EEEeCEEE
Confidence 00011 00 01234567778888888777 788988888888 655 4332 22322 22 57799999
Q ss_pred EeecCCc
Q 009785 217 VCDGCFS 223 (526)
Q Consensus 217 ~ADG~~S 223 (526)
.|+|...
T Consensus 112 lAtG~~~ 118 (315)
T 3r9u_A 112 VCTGSAP 118 (315)
T ss_dssp ECCCEEE
T ss_pred EeeCCCC
Confidence 9999743
No 119
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.61 E-value=1.5e-07 Score=99.37 Aligned_cols=36 Identities=33% Similarity=0.585 Sum_probs=33.5
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 58 PFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 58 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
+.+|||+||||||+|+++|+.|++.|.+|+|+|+.+
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 446999999999999999999999999999999964
No 120
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.59 E-value=8.7e-08 Score=100.00 Aligned_cols=35 Identities=37% Similarity=0.488 Sum_probs=33.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~ 94 (526)
++||+||||||+|+++|..|++.|.+|+|+|+++.
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~ 40 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNET 40 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 58999999999999999999999999999999854
No 121
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.59 E-value=5.4e-08 Score=99.55 Aligned_cols=110 Identities=20% Similarity=0.264 Sum_probs=69.9
Q ss_pred CcEEEECCCHHHHHHHHHHHh---CCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEEC
Q 009785 61 ADVIVVGAGVAGAALANTLAK---DGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKD 137 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~---~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 137 (526)
.+|+|||||++|+++|..|++ .|.+|+|+|+++... ..+. +. .
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~-------~~~~---------~~----~-------------- 47 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSY-------FRPA---------LP----H-------------- 47 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEE-------ECCS---------SC----C--------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCce-------eccc---------hh----h--------------
Confidence 379999999999999999999 899999999985210 0000 00 0
Q ss_pred CeeeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEE
Q 009785 138 GNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIV 217 (526)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~ 217 (526)
..... . ...++...+.+.+.+. +++++.++|+++..++.. |++.+.+++..++.+|.||.
T Consensus 48 -------~~~~~--~-------~~~~~~~~~~~~~~~~-gv~~~~~~v~~i~~~~~~---V~~~~g~~~~~~~~~d~lVi 107 (409)
T 3h8l_A 48 -------VAIGV--R-------DVDELKVDLSEALPEK-GIQFQEGTVEKIDAKSSM---VYYTKPDGSMAEEEYDYVIV 107 (409)
T ss_dssp -------CCSSC--C-------CCCCEEEEHHHHTGGG-TCEEEECEEEEEETTTTE---EEEECTTSCEEEEECSEEEE
T ss_pred -------cccCC--c-------CHHHHHHHHHHHHhhC-CeEEEEeeEEEEeCCCCE---EEEccCCcccceeeCCEEEE
Confidence 00000 0 0000111223333333 788888889998776653 55556555556788999999
Q ss_pred eecCCcc
Q 009785 218 CDGCFSN 224 (526)
Q Consensus 218 ADG~~S~ 224 (526)
|+|....
T Consensus 108 AtG~~~~ 114 (409)
T 3h8l_A 108 GIGAHLA 114 (409)
T ss_dssp CCCCEEC
T ss_pred CCCCCcC
Confidence 9998543
No 122
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.56 E-value=6.1e-08 Score=101.67 Aligned_cols=36 Identities=33% Similarity=0.488 Sum_probs=32.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC
Q 009785 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (526)
Q Consensus 59 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~ 94 (526)
+++||+||||||+|+++|+.|++.|.+|+|+||++.
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~ 59 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRST 59 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 469999999999999999999999999999998753
No 123
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.55 E-value=3.6e-07 Score=95.56 Aligned_cols=56 Identities=14% Similarity=0.189 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEeecCCcc
Q 009785 163 RFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFSN 224 (526)
Q Consensus 163 ~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~ADG~~S~ 224 (526)
.+.+.+.+.+++. +++++.++ |+++..+++.+ .+...+|+ ++.+|.||.|.|..+.
T Consensus 233 ~~~~~l~~~l~~~-Gv~i~~~~~V~~i~~~~~~v---~v~~~~g~--~i~aD~Vi~A~G~~p~ 289 (484)
T 3o0h_A 233 DLRQLLNDAMVAK-GISIIYEATVSQVQSTENCY---NVVLTNGQ--TICADRVMLATGRVPN 289 (484)
T ss_dssp HHHHHHHHHHHHH-TCEEESSCCEEEEEECSSSE---EEEETTSC--EEEESEEEECCCEEEC
T ss_pred HHHHHHHHHHHHC-CCEEEeCCEEEEEEeeCCEE---EEEECCCc--EEEcCEEEEeeCCCcC
Confidence 4556677777666 79999874 99998776643 45566775 4679999999997654
No 124
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.54 E-value=3.6e-07 Score=95.67 Aligned_cols=35 Identities=31% Similarity=0.431 Sum_probs=32.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 59 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
.+|||+||||||+|+++|+.|++.|.+|+|+||.+
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~ 39 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVE 39 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecc
Confidence 36999999999999999999999999999999853
No 125
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.53 E-value=3.7e-07 Score=94.70 Aligned_cols=33 Identities=33% Similarity=0.584 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERD 92 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~ 92 (526)
++||+|||||++|+++|..|++.|.+|+|+|++
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 35 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG 35 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 489999999999999999999999999999997
No 126
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.53 E-value=2.2e-07 Score=96.78 Aligned_cols=35 Identities=26% Similarity=0.384 Sum_probs=32.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~ 94 (526)
++||+|||||++|+++|+.|++.|.+|+|+|+++.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~ 36 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGA 36 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 48999999999999999999999999999999854
No 127
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.52 E-value=2.7e-07 Score=91.47 Aligned_cols=115 Identities=21% Similarity=0.257 Sum_probs=68.3
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCc-----ccceee---CcchHHHHHHcCC-cchhhcccceeeee
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDR-----IVGELL---QPGGYLKLIELGL-EDCVEQIDAQRVFG 131 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~-----~~g~~l---~~~~~~~l~~lGl-~~~l~~~~~~~~~~ 131 (526)
+||+|||||++|+.+|+.|++.|.+|+|+|+++..... ..++.. +.+|...+...|+ .++++..+..-...
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~tp~h~~d~i~eL~CnpSigG~~~~~akGlL~~EIdaLGg~m~~~ 81 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRMTPAHGTDRFAEIVCSNSLGGEGETNAKGLLQAEMRRAGSLVMEA 81 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSCCSSCCSSCTTCCCSCCEEEECSTTCHHHHHHHHHHHHTCHHHHH
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcCCccccCCCccccccCcCCCccccccchhHHHHHHHHcCChHhhh
Confidence 58999999999999999999999999999998632111 122221 1112111111121 12222211100000
Q ss_pred eEEEECCeeeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEeceEEEEE
Q 009785 132 YALFKDGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLL 189 (526)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~v~~l~ 189 (526)
.....+ | . .....++|..+.+.+.+.+.+.|+++++.++|+++.
T Consensus 82 ------aD~~~i--p-----A-g~al~vDR~~f~~~~~~~le~~pni~l~q~eV~~l~ 125 (443)
T 3g5s_A 82 ------ADLARV--P-----A-GGALAVDREEFSGYITERLTGHPLLEVVREEVREIP 125 (443)
T ss_dssp ------HHHSEE--C-----C-TTEEEECHHHHHHHHHHHHHTCTTEEEECSCCCSCC
T ss_pred ------hhhcCC--C-----C-CccccCCcHHHHHHHHHHHHcCCCeEEEhhhhhhhc
Confidence 000000 1 0 111358999999999999999999999988877774
No 128
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.52 E-value=1.7e-07 Score=96.47 Aligned_cols=36 Identities=25% Similarity=0.494 Sum_probs=32.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCC--eEEEEecCCC
Q 009785 59 FDADVIVVGAGVAGAALANTLAKDGR--RVHVIERDLS 94 (526)
Q Consensus 59 ~~~dVvIVGaG~aGl~~A~~La~~G~--~V~l~Er~~~ 94 (526)
+++||+|||||++|+++|..|++.|. +|+|+|+.+.
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~ 40 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATV 40 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCS
T ss_pred CCCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCC
Confidence 35899999999999999999999998 7999998753
No 129
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.51 E-value=2.7e-07 Score=96.36 Aligned_cols=35 Identities=37% Similarity=0.437 Sum_probs=33.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~ 94 (526)
+|||+||||||+|+++|+.|++.|.+|+|+||++.
T Consensus 3 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~ 37 (476)
T 3lad_A 3 KFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKG 37 (476)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCc
Confidence 69999999999999999999999999999999863
No 130
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.50 E-value=1.7e-06 Score=89.32 Aligned_cols=41 Identities=24% Similarity=0.368 Sum_probs=36.2
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCC
Q 009785 56 ECPFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEP 96 (526)
Q Consensus 56 ~~~~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~ 96 (526)
.++.++||+|||+|++|+++|..|++.|.+|+|+||++...
T Consensus 16 ~~~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~G 56 (475)
T 3p1w_A 16 FQGEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYG 56 (475)
T ss_dssp -CCCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred cccccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCC
Confidence 34557999999999999999999999999999999997543
No 131
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.49 E-value=5e-07 Score=94.01 Aligned_cols=34 Identities=35% Similarity=0.445 Sum_probs=32.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecC
Q 009785 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERD 92 (526)
Q Consensus 59 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~ 92 (526)
.++||+|||||++|+++|+.|++.|.+|+|+|++
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 36 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG 36 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4689999999999999999999999999999997
No 132
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.48 E-value=1.3e-07 Score=98.83 Aligned_cols=113 Identities=12% Similarity=0.112 Sum_probs=69.3
Q ss_pred CcEEEECCCHHHHHHHHHHHhC--CCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECC
Q 009785 61 ADVIVVGAGVAGAALANTLAKD--GRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDG 138 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~--G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 138 (526)
+||+|||||++|+++|..|++. |.+|+|+|+.+......+ ++..+ +..
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~-------~~~~~--------~~~--------------- 86 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQC-------GLPYV--------ISG--------------- 86 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGG-------GHHHH--------HTT---------------
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCC-------Ccchh--------hcC---------------
Confidence 6999999999999999999996 899999999864321111 11100 000
Q ss_pred eeeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEec-eEEEEEeeCCeEEEEEEEe-CCCcEEEEEcCeEE
Q 009785 139 NRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKT-KAGEELTAYAPLTI 216 (526)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~-~v~~l~~~~~~v~gv~v~~-~~G~~~~i~a~~vV 216 (526)
. .. .. ...+.+ ..+.+.+..+++++.+ +|+.+..+++. |++.+ .+|+..++.+|.+|
T Consensus 87 ~-----~~------~~-~~l~~~------~~~~~~~~~gv~~~~~~~v~~i~~~~~~---v~v~~~~~g~~~~~~~d~lv 145 (480)
T 3cgb_A 87 A-----IA------ST-EKLIAR------NVKTFRDKYGIDAKVRHEVTKVDTEKKI---VYAEHTKTKDVFEFSYDRLL 145 (480)
T ss_dssp S-----SS------CG-GGGBSS------CHHHHHHTTCCEEESSEEEEEEETTTTE---EEEEETTTCCEEEEECSEEE
T ss_pred C-----cC------CH-HHhhhc------CHHHHHhhcCCEEEeCCEEEEEECCCCE---EEEEEcCCCceEEEEcCEEE
Confidence 0 00 00 000000 0112222337898887 58888766663 45555 45664568899999
Q ss_pred EeecCCcc
Q 009785 217 VCDGCFSN 224 (526)
Q Consensus 217 ~ADG~~S~ 224 (526)
.|+|....
T Consensus 146 iAtG~~p~ 153 (480)
T 3cgb_A 146 IATGVRPV 153 (480)
T ss_dssp ECCCEEEC
T ss_pred ECCCCccc
Confidence 99997543
No 133
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.48 E-value=3.4e-07 Score=95.40 Aligned_cols=35 Identities=23% Similarity=0.279 Sum_probs=31.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHhC--CCeEEEEecCCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKD--GRRVHVIERDLS 94 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~--G~~V~l~Er~~~ 94 (526)
..||+|||||++|+++|..|+++ |.+|+|+|+++.
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~ 39 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASR 39 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC--
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCc
Confidence 36899999999999999999998 999999999865
No 134
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.47 E-value=1e-07 Score=98.41 Aligned_cols=107 Identities=16% Similarity=0.208 Sum_probs=69.3
Q ss_pred CcEEEECCCHHHHHHHHHHHh---CCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEEC
Q 009785 61 ADVIVVGAGVAGAALANTLAK---DGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKD 137 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~---~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 137 (526)
.||+|||||++|+++|..|++ .|++|+|+|+++... ..+...... .|.
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~-------~~~~~~~~~--~g~-------------------- 55 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQ-------FVPSNPWVG--VGW-------------------- 55 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEE-------CGGGHHHHH--HTS--------------------
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCc-------ccCCccccc--cCc--------------------
Confidence 589999999999999999999 899999999985210 111100000 000
Q ss_pred CeeeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEE
Q 009785 138 GNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIV 217 (526)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~ 217 (526)
.....+...+.+.+.+. +++++.++|+++..++.. +..++|+ ++.+|+||.
T Consensus 56 ---------------------~~~~~~~~~l~~~~~~~-gv~~~~~~v~~id~~~~~-----V~~~~g~--~i~~d~lvi 106 (437)
T 3sx6_A 56 ---------------------KERDDIAFPIRHYVERK-GIHFIAQSAEQIDAEAQN-----ITLADGN--TVHYDYLMI 106 (437)
T ss_dssp ---------------------SCHHHHEEECHHHHHTT-TCEEECSCEEEEETTTTE-----EEETTSC--EEECSEEEE
T ss_pred ---------------------cCHHHHHHHHHHHHHHC-CCEEEEeEEEEEEcCCCE-----EEECCCC--EEECCEEEE
Confidence 01111222233344444 788888889999766553 2345665 467999999
Q ss_pred eecCCccc
Q 009785 218 CDGCFSNL 225 (526)
Q Consensus 218 ADG~~S~v 225 (526)
|+|..+..
T Consensus 107 AtG~~~~~ 114 (437)
T 3sx6_A 107 ATGPKLAF 114 (437)
T ss_dssp CCCCEECG
T ss_pred CCCCCcCc
Confidence 99986643
No 135
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.46 E-value=1.6e-07 Score=97.29 Aligned_cols=34 Identities=21% Similarity=0.229 Sum_probs=31.5
Q ss_pred CcEEEECCCHHHHHHHHHHHhC--CCeEEEEecCCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKD--GRRVHVIERDLS 94 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~--G~~V~l~Er~~~ 94 (526)
+||+|||||++|+++|..|++. |.+|+|+|+++.
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~ 36 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDF 36 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCc
Confidence 3899999999999999999998 999999999864
No 136
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.42 E-value=5e-07 Score=94.89 Aligned_cols=34 Identities=29% Similarity=0.381 Sum_probs=32.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHhC---CCeEEEEecCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKD---GRRVHVIERDL 93 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~---G~~V~l~Er~~ 93 (526)
++||+|||||++|+++|+.|++. |.+|+|+|++.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC
Confidence 48999999999999999999999 99999999985
No 137
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.42 E-value=1.3e-06 Score=91.18 Aligned_cols=34 Identities=38% Similarity=0.597 Sum_probs=31.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecC
Q 009785 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERD 92 (526)
Q Consensus 59 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~ 92 (526)
.+|||+||||||+|+++|+.|++.|.+|+|+||.
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~ 41 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFV 41 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEec
Confidence 3699999999999999999999999999999964
No 138
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.41 E-value=2.7e-07 Score=95.69 Aligned_cols=34 Identities=29% Similarity=0.295 Sum_probs=31.8
Q ss_pred CcEEEECCCHHHHHHHHHHHhC--CCeEEEEecCCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKD--GRRVHVIERDLS 94 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~--G~~V~l~Er~~~ 94 (526)
+||+|||||++|+++|..|++. |.+|+|+|+++.
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~ 36 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDN 36 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCC
Confidence 5899999999999999999998 999999999864
No 139
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.41 E-value=5.7e-07 Score=93.18 Aligned_cols=34 Identities=21% Similarity=0.438 Sum_probs=32.0
Q ss_pred CcEEEECCCHHHHHHHHHHHhC--CCeEEEEecCCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKD--GRRVHVIERDLS 94 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~--G~~V~l~Er~~~ 94 (526)
.||+|||||++|+++|..|+++ |.+|+|+|+++.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~ 38 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQAT 38 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCC
Confidence 5899999999999999999998 899999999864
No 140
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.39 E-value=2.7e-07 Score=91.23 Aligned_cols=58 Identities=31% Similarity=0.397 Sum_probs=41.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHh--CCCeEEEEecCCCCCCccc-------ceeeCcchHHHHHHcCC
Q 009785 60 DADVIVVGAGVAGAALANTLAK--DGRRVHVIERDLSEPDRIV-------GELLQPGGYLKLIELGL 117 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~--~G~~V~l~Er~~~~~~~~~-------g~~l~~~~~~~l~~lGl 117 (526)
++||+||||||+||++|+.|++ .|++|+|+||.+.+..... ...+.......++++|+
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~~~~~~~l~~~~~~~~~e~Gv 131 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEI 131 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCSTTCCCEEEETTTHHHHHHTTC
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCccCCHHHHHHHHHHHHHHcCC
Confidence 5899999999999999999974 5999999999865543211 12334444455566554
No 141
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.39 E-value=7.5e-07 Score=92.98 Aligned_cols=35 Identities=29% Similarity=0.411 Sum_probs=32.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 59 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
.++||+|||||++|+++|..|++.|.+|+|+||+.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 36899999999999999999999999999999973
No 142
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.37 E-value=2.6e-07 Score=96.77 Aligned_cols=35 Identities=26% Similarity=0.443 Sum_probs=32.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCC---CeEEEEecCCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDG---RRVHVIERDLS 94 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G---~~V~l~Er~~~ 94 (526)
++||+|||||++|+++|..|++.| .+|+|+|+++.
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~ 72 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSN 72 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCC
Confidence 589999999999999999999988 99999999864
No 143
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.37 E-value=1.2e-06 Score=91.12 Aligned_cols=33 Identities=30% Similarity=0.470 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERD 92 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~ 92 (526)
++||+||||||+|+++|+.|+++|++|+|+||.
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk~ 37 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAALGKKVAIAEEF 37 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 589999999999999999999999999999994
No 144
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.34 E-value=9.4e-07 Score=90.45 Aligned_cols=36 Identities=44% Similarity=0.576 Sum_probs=33.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCe--EEEEecCCC
Q 009785 59 FDADVIVVGAGVAGAALANTLAKDGRR--VHVIERDLS 94 (526)
Q Consensus 59 ~~~dVvIVGaG~aGl~~A~~La~~G~~--V~l~Er~~~ 94 (526)
+++||+|||||++|+++|..|+++|.+ |+|+|+.+.
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~ 45 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPE 45 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSS
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCC
Confidence 358999999999999999999999987 999999864
No 145
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.34 E-value=2e-06 Score=92.13 Aligned_cols=112 Identities=19% Similarity=0.239 Sum_probs=70.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHhC--CCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEEC
Q 009785 60 DADVIVVGAGVAGAALANTLAKD--GRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKD 137 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~--G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 137 (526)
..+|+|||||++|+++|..|++. |.+|+|+|+++... ..+.++... -.|..
T Consensus 36 ~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~-------~~~~~lp~~-~~g~~------------------- 88 (588)
T 3ics_A 36 SRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYIS-------FANCGLPYY-IGGVI------------------- 88 (588)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSS-------BCGGGHHHH-HTTSS-------------------
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCcc-------ccCCCCchh-hcCcC-------------------
Confidence 47999999999999999999998 89999999986532 111111100 00000
Q ss_pred CeeeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEec-eEEEEEeeCCeEEEEEEEe-CCCcEEEEEcCeE
Q 009785 138 GNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKT-KAGEELTAYAPLT 215 (526)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~-~v~~l~~~~~~v~gv~v~~-~~G~~~~i~a~~v 215 (526)
... ...+...+...+.+. ++.++.+ +|+++..++.. +.+.+ .+|+..++.+|.+
T Consensus 89 --------------~~~------~~~~~~~~~~~~~~~-gi~v~~~~~V~~id~~~~~---v~v~~~~~g~~~~~~~d~l 144 (588)
T 3ics_A 89 --------------TER------QKLLVQTVERMSKRF-NLDIRVLSEVVKINKEEKT---ITIKNVTTNETYNEAYDVL 144 (588)
T ss_dssp --------------CCG------GGGBSSCHHHHHHHT-TCEEECSEEEEEEETTTTE---EEEEETTTCCEEEEECSEE
T ss_pred --------------CCh------HHhhccCHHHHHHhc-CcEEEECCEEEEEECCCCE---EEEeecCCCCEEEEeCCEE
Confidence 000 000111122222233 7888776 59998877664 44544 4566667889999
Q ss_pred EEeecCC
Q 009785 216 IVCDGCF 222 (526)
Q Consensus 216 V~ADG~~ 222 (526)
|.|+|..
T Consensus 145 viAtG~~ 151 (588)
T 3ics_A 145 ILSPGAK 151 (588)
T ss_dssp EECCCEE
T ss_pred EECCCCC
Confidence 9999974
No 146
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=98.33 E-value=5.6e-07 Score=95.59 Aligned_cols=53 Identities=23% Similarity=0.354 Sum_probs=43.0
Q ss_pred HHHcCCCeEEEece-EEEEEee----CCeEEEEEEEeCCCcEEEEEcC-eEEEeecCCc
Q 009785 171 KAASLPNVRLEQGT-VTSLLEE----KGTIKGVQYKTKAGEELTAYAP-LTIVCDGCFS 223 (526)
Q Consensus 171 ~a~~~~~v~i~~~~-v~~l~~~----~~~v~gv~v~~~~G~~~~i~a~-~vV~ADG~~S 223 (526)
.+.+++|+++..++ |+++..+ +++++||++...+|..++++|+ -||.|.|+..
T Consensus 235 p~~~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~ 293 (583)
T 3qvp_A 235 PNYQRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAV 293 (583)
T ss_dssp TTTTCTTEEEECSCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTT
T ss_pred HhhcCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccC
Confidence 34456799999885 9999977 6789999998778888889996 6888888774
No 147
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.31 E-value=4.8e-06 Score=87.30 Aligned_cols=62 Identities=16% Similarity=0.148 Sum_probs=45.4
Q ss_pred eechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCC-------eEEEEEEEe-CCCcEEEEEcCeEEEeecC
Q 009785 159 FHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKG-------TIKGVQYKT-KAGEELTAYAPLTIVCDGC 221 (526)
Q Consensus 159 ~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~-------~v~gv~v~~-~~G~~~~i~a~~vV~ADG~ 221 (526)
..|.++.+.|...+.+. +..+++++ |+++..++. ....|+..+ .+|+..+++|+.||.|+|.
T Consensus 142 p~r~E~~~Yl~~~A~~~-~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~ 212 (501)
T 4b63_A 142 PARLEFEDYMRWCAQQF-SDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGG 212 (501)
T ss_dssp CBHHHHHHHHHHHHHTT-GGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred CCHHHHHHHHHHHHHHc-CCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCC
Confidence 46788999999998887 45677775 999875432 123355554 4577778899999999994
No 148
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.31 E-value=1.3e-06 Score=90.48 Aligned_cols=35 Identities=26% Similarity=0.350 Sum_probs=32.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHhC--CCeEEEEecCCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKD--GRRVHVIERDLS 94 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~--G~~V~l~Er~~~ 94 (526)
.+||+|||||++|+++|..|++. |.+|+|+|+.+.
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~ 39 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEW 39 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSC
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCc
Confidence 47999999999999999999998 889999999864
No 149
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.30 E-value=5.8e-07 Score=93.21 Aligned_cols=34 Identities=35% Similarity=0.524 Sum_probs=32.3
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~ 94 (526)
+||+||||||+|+++|..|++.|.+|+|+|+++.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~ 35 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKA 35 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCC
Confidence 7999999999999999999999999999999854
No 150
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=98.29 E-value=2.7e-06 Score=90.34 Aligned_cols=52 Identities=31% Similarity=0.453 Sum_probs=42.9
Q ss_pred HcCCCeEEEece-EEEEEee--CCeEEEEEEEeCCCcEEEEEc-CeEEEeecCCcc
Q 009785 173 ASLPNVRLEQGT-VTSLLEE--KGTIKGVQYKTKAGEELTAYA-PLTIVCDGCFSN 224 (526)
Q Consensus 173 ~~~~~v~i~~~~-v~~l~~~--~~~v~gv~v~~~~G~~~~i~a-~~vV~ADG~~S~ 224 (526)
.+++|++++.++ |+++..+ +++++||++...+|...+++| +-||.|.|+...
T Consensus 216 ~~r~Nl~v~~~a~v~ri~~~~~~~~a~GV~~~~~~g~~~~v~A~keVILsaGa~~s 271 (577)
T 3q9t_A 216 KNKPNITIVPEVHSKRLIINEADRTCKGVTVVTAAGNELNFFADREVILSQGVFET 271 (577)
T ss_dssp SSCTTEEEECSEEEEEEEEETTTTEEEEEEEEETTSCEEEEEEEEEEEECSHHHHH
T ss_pred hcCCCeEEEcCcEEEEEEEeCCCCEEEEEEEEeCCCcEEEEEeeeEEEEcccccCC
Confidence 345789999885 9999987 788999999887788888888 679999997643
No 151
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.28 E-value=4.7e-06 Score=86.56 Aligned_cols=101 Identities=20% Similarity=0.246 Sum_probs=74.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCee
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 140 (526)
-+|+|||||++|+-+|..|++.|.+|+|+|+.+.....
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 207 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQ------------------------------------------ 207 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccc------------------------------------------
Confidence 47999999999999999999999999999998531100
Q ss_pred eeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCC--CcEEEEEcCeEEE
Q 009785 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKA--GEELTAYAPLTIV 217 (526)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~--G~~~~i~a~~vV~ 217 (526)
....+.+.+.+.+++. +++++.++ |+++..+++.+. +++.. + |+..++.+|.||.
T Consensus 208 -------------------~~~~~~~~l~~~l~~~-gV~i~~~~~v~~i~~~~~~~~-v~~~~-~~~g~~~~i~~D~vv~ 265 (464)
T 2eq6_A 208 -------------------GDPETAALLRRALEKE-GIRVRTKTKAVGYEKKKDGLH-VRLEP-AEGGEGEEVVVDKVLV 265 (464)
T ss_dssp -------------------SCHHHHHHHHHHHHHT-TCEEECSEEEEEEEEETTEEE-EEEEE-TTCCSCEEEEESEEEE
T ss_pred -------------------cCHHHHHHHHHHHHhc-CCEEEcCCEEEEEEEeCCEEE-EEEee-cCCCceeEEEcCEEEE
Confidence 0113455566666666 79999884 999987766432 44432 4 6645688999999
Q ss_pred eecCCccc
Q 009785 218 CDGCFSNL 225 (526)
Q Consensus 218 ADG~~S~v 225 (526)
|+|..+..
T Consensus 266 a~G~~p~~ 273 (464)
T 2eq6_A 266 AVGRKPRT 273 (464)
T ss_dssp CSCEEESC
T ss_pred CCCcccCC
Confidence 99987655
No 152
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.27 E-value=1.6e-06 Score=88.44 Aligned_cols=34 Identities=29% Similarity=0.473 Sum_probs=31.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCC--eEEEEecCCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGR--RVHVIERDLS 94 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~--~V~l~Er~~~ 94 (526)
.+|+|||||++|+++|..|+++|. +|+|+|+.+.
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~ 37 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKH 37 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSS
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCC
Confidence 489999999999999999999998 8999999863
No 153
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.24 E-value=8.5e-06 Score=87.45 Aligned_cols=35 Identities=34% Similarity=0.560 Sum_probs=32.4
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecC
Q 009785 58 PFDADVIVVGAGVAGAALANTLAKDGRRVHVIERD 92 (526)
Q Consensus 58 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~ 92 (526)
...+||+||||||+|+++|..|++.|.+|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 34689999999999999999999999999999984
No 154
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.23 E-value=8.6e-06 Score=82.32 Aligned_cols=100 Identities=20% Similarity=0.283 Sum_probs=75.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCe
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 139 (526)
.-+|+|||||+.|+.+|..|++.|.+|+++|+.+.....
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~----------------------------------------- 183 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPG----------------------------------------- 183 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhc-----------------------------------------
Confidence 357999999999999999999999999999998531110
Q ss_pred eeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEe
Q 009785 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVC 218 (526)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~A 218 (526)
.....+.+.+.+.+++. +++++.++ |+++..+++. +.+...+|+ ++.+|.||.|
T Consensus 184 -------------------~~~~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~~~~---~~v~~~~g~--~i~~d~vv~a 238 (384)
T 2v3a_A 184 -------------------LLHPAAAKAVQAGLEGL-GVRFHLGPVLASLKKAGEG---LEAHLSDGE--VIPCDLVVSA 238 (384)
T ss_dssp -------------------TSCHHHHHHHHHHHHTT-TCEEEESCCEEEEEEETTE---EEEEETTSC--EEEESEEEEC
T ss_pred -------------------ccCHHHHHHHHHHHHHc-CCEEEeCCEEEEEEecCCE---EEEEECCCC--EEECCEEEEC
Confidence 00123556667777766 79999885 9999877663 445566775 4679999999
Q ss_pred ecCCccc
Q 009785 219 DGCFSNL 225 (526)
Q Consensus 219 DG~~S~v 225 (526)
+|..+..
T Consensus 239 ~G~~p~~ 245 (384)
T 2v3a_A 239 VGLRPRT 245 (384)
T ss_dssp SCEEECC
T ss_pred cCCCcCH
Confidence 9988764
No 155
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.22 E-value=2.5e-06 Score=88.98 Aligned_cols=34 Identities=35% Similarity=0.481 Sum_probs=32.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecC
Q 009785 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERD 92 (526)
Q Consensus 59 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~ 92 (526)
.++||+||||||+|+++|+.|++.|.+|+|+||+
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~ 52 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGARAAVVESH 52 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC
Confidence 4699999999999999999999999999999976
No 156
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.22 E-value=3.6e-07 Score=94.08 Aligned_cols=34 Identities=29% Similarity=0.463 Sum_probs=31.7
Q ss_pred CcEEEECCCHHHHHHHHHHHh--CCCeEEEEecCCC
Q 009785 61 ADVIVVGAGVAGAALANTLAK--DGRRVHVIERDLS 94 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~--~G~~V~l~Er~~~ 94 (526)
.||+|||||++|+++|..|++ .|++|+|+|+++.
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~ 38 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPY 38 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCC
Confidence 589999999999999999999 8999999999853
No 157
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.22 E-value=4.5e-06 Score=87.31 Aligned_cols=32 Identities=34% Similarity=0.509 Sum_probs=30.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHh-CCCeEEEEec
Q 009785 60 DADVIVVGAGVAGAALANTLAK-DGRRVHVIER 91 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~-~G~~V~l~Er 91 (526)
++||+||||||+|+++|+.|++ .|.+|+|+|+
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 35 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDL 35 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEec
Confidence 5899999999999999999999 9999999994
No 158
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.21 E-value=7.1e-06 Score=86.59 Aligned_cols=60 Identities=17% Similarity=0.315 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEeecCCc
Q 009785 163 RFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFS 223 (526)
Q Consensus 163 ~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~ADG~~S 223 (526)
.....+...++..++.++..+. |+++..+++++++|.+...++. .++.|+-||.|.|+..
T Consensus 211 ~~~~~~~~~~~~r~nl~v~~~~~v~~i~~~~~~a~gv~~~~~~~~-~~~~a~~VILsAGai~ 271 (526)
T 3t37_A 211 AADAWLTKAVRGRKNLTILTGSRVRRLKLEGNQVRSLEVVGRQGS-AEVFADQIVLCAGALE 271 (526)
T ss_dssp HHHHHSCHHHHTCTTEEEECSCEEEEEEEETTEEEEEEEEETTEE-EEEEEEEEEECSHHHH
T ss_pred cccccccccccCCCCeEEEeCCEEEEEEecCCeEEEEEEEecCce-EEEeecceEEcccccC
Confidence 3444555566667799999885 9999999999999999876554 5688999999999753
No 159
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.20 E-value=1.8e-06 Score=87.37 Aligned_cols=36 Identities=19% Similarity=0.335 Sum_probs=33.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSE 95 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~ 95 (526)
++.|+|||||++|+++|..|.+.+.+|+|+|+.+..
T Consensus 9 ~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~ 44 (385)
T 3klj_A 9 STKILILGAGPAGFSAAKAALGKCDDITMINSEKYL 44 (385)
T ss_dssp BCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSC
T ss_pred CCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCC
Confidence 578999999999999999998889999999998653
No 160
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.18 E-value=5.4e-06 Score=91.00 Aligned_cols=38 Identities=37% Similarity=0.459 Sum_probs=34.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPD 97 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~ 97 (526)
.+||+|||||++|+++|+.|++.|++|+|+|+......
T Consensus 336 ~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 336 NKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGG 373 (776)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceec
Confidence 58999999999999999999999999999999865543
No 161
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.17 E-value=7.7e-07 Score=93.60 Aligned_cols=39 Identities=28% Similarity=0.488 Sum_probs=35.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHh-CCCeEEEEecCCCCCCc
Q 009785 60 DADVIVVGAGVAGAALANTLAK-DGRRVHVIERDLSEPDR 98 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~-~G~~V~l~Er~~~~~~~ 98 (526)
++||+|||||++||++|+.|++ .|++|+|+|+++....+
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~ 49 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGL 49 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGG
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCC
Confidence 5899999999999999999998 59999999999876543
No 162
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.17 E-value=5.5e-06 Score=88.26 Aligned_cols=35 Identities=17% Similarity=0.271 Sum_probs=31.9
Q ss_pred CcEEEECCCHHHHHHHHHHHhC--CCeEEEEecCCCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKD--GRRVHVIERDLSE 95 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~--G~~V~l~Er~~~~ 95 (526)
.+|+|||||++|+++|..|+++ |.+|+|+|+.+..
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~ 38 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYV 38 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCc
Confidence 3799999999999999999998 8999999999653
No 163
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.17 E-value=3.3e-06 Score=88.36 Aligned_cols=111 Identities=17% Similarity=0.197 Sum_probs=69.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCe
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 139 (526)
.+||+|||||++|+++|+.|++. .+|+|+|+++....... . . . ...
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~----~-----------------~-~-~~~---------- 153 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMW----L-----------------K-G-IKQ---------- 153 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGG----G-----------------T-C-SEE----------
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeee----c-----------------c-c-ccc----------
Confidence 57999999999999999999999 99999999864321100 0 0 0 000
Q ss_pred eeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEe
Q 009785 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVC 218 (526)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~A 218 (526)
..++ + ...++...+.+.+ ..+++++.++ |.++..++..+. +. ...+++..++.+|.+|.|
T Consensus 154 ---~g~~---------~---~~~~~~~~l~~~l--~~~v~~~~~~~v~~i~~~~~~~~-~~-~~~~~~~~~~~~d~lvlA 214 (493)
T 1y56_A 154 ---EGFN---------K---DSRKVVEELVGKL--NENTKIYLETSALGVFDKGEYFL-VP-VVRGDKLIEILAKRVVLA 214 (493)
T ss_dssp ---TTTT---------E---EHHHHHHHHHHTC--CTTEEEETTEEECCCEECSSSEE-EE-EEETTEEEEEEESCEEEC
T ss_pred ---CCCC---------C---CHHHHHHHHHHHH--hcCCEEEcCCEEEEEEcCCcEEE-EE-EecCCeEEEEECCEEEEC
Confidence 0000 0 1223444444444 3478888774 887776655433 21 123455456889999999
Q ss_pred ecCCc
Q 009785 219 DGCFS 223 (526)
Q Consensus 219 DG~~S 223 (526)
+|...
T Consensus 215 tGa~~ 219 (493)
T 1y56_A 215 TGAID 219 (493)
T ss_dssp CCEEE
T ss_pred CCCCc
Confidence 99754
No 164
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.16 E-value=1.6e-06 Score=89.81 Aligned_cols=41 Identities=32% Similarity=0.484 Sum_probs=36.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCc
Q 009785 58 PFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDR 98 (526)
Q Consensus 58 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~ 98 (526)
+.++||+|||||++||++|+.|++.|++|+|+|+++....+
T Consensus 9 ~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~ 49 (453)
T 2bcg_G 9 DTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGE 49 (453)
T ss_dssp CCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGG
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCcc
Confidence 34689999999999999999999999999999999776544
No 165
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.16 E-value=2.4e-06 Score=89.72 Aligned_cols=63 Identities=29% Similarity=0.366 Sum_probs=48.1
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCccc-----c-------eee---CcchHHHHHHcCCcch
Q 009785 58 PFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIV-----G-------ELL---QPGGYLKLIELGLEDC 120 (526)
Q Consensus 58 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~-----g-------~~l---~~~~~~~l~~lGl~~~ 120 (526)
.+.+||+|||||++||++|+.|+++|++|+|+|+++....+.. | ..+ ++...+.++++|+.+.
T Consensus 11 ~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~lgl~~~ 88 (504)
T 1sez_A 11 SSAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDGLIWDEGANTMTESEGDVTFLIDSLGLREK 88 (504)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEETTEEEESSCCCBCCCSHHHHHHHHHTTCGGG
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeeccCCeEEecCCcccccCcHHHHHHHHHcCCccc
Confidence 3468999999999999999999999999999999976654321 1 112 2456788999998754
No 166
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.16 E-value=3.2e-06 Score=88.58 Aligned_cols=35 Identities=31% Similarity=0.465 Sum_probs=31.9
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHh-CCCeEEEEec
Q 009785 57 CPFDADVIVVGAGVAGAALANTLAK-DGRRVHVIER 91 (526)
Q Consensus 57 ~~~~~dVvIVGaG~aGl~~A~~La~-~G~~V~l~Er 91 (526)
|+.++||+||||||+|+++|+.|++ .|++|+|+|+
T Consensus 4 M~~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 39 (495)
T 2wpf_A 4 MSKAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDV 39 (495)
T ss_dssp CCEEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred cccccCEEEECCChhHHHHHHHHHHhcCCeEEEEec
Confidence 3346899999999999999999999 9999999994
No 167
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.15 E-value=1.1e-05 Score=83.45 Aligned_cols=98 Identities=21% Similarity=0.204 Sum_probs=72.8
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCee
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 140 (526)
-+|+|||||++|+.+|..|++.|.+|+|+|+.+...+.
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~------------------------------------------ 205 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPT------------------------------------------ 205 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccccc------------------------------------------
Confidence 47999999999999999999999999999998531100
Q ss_pred eeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEec-eEEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEee
Q 009785 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCD 219 (526)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~-~v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~AD 219 (526)
....+.+.|.+.+++. +++++.+ +|+++..+++. +.+...+|+ ++.+|.||.|+
T Consensus 206 -------------------~~~~~~~~l~~~l~~~-Gv~i~~~~~V~~i~~~~~~---v~v~~~~g~--~i~~D~vv~A~ 260 (455)
T 2yqu_A 206 -------------------MDLEVSRAAERVFKKQ-GLTIRTGVRVTAVVPEAKG---ARVELEGGE--VLEADRVLVAV 260 (455)
T ss_dssp -------------------SCHHHHHHHHHHHHHH-TCEEECSCCEEEEEEETTE---EEEEETTSC--EEEESEEEECS
T ss_pred -------------------cCHHHHHHHHHHHHHC-CCEEEECCEEEEEEEeCCE---EEEEECCCe--EEEcCEEEECc
Confidence 0012444555555555 7999988 49999877664 445555665 46799999999
Q ss_pred cCCccc
Q 009785 220 GCFSNL 225 (526)
Q Consensus 220 G~~S~v 225 (526)
|..+..
T Consensus 261 G~~p~~ 266 (455)
T 2yqu_A 261 GRRPYT 266 (455)
T ss_dssp CEEECC
T ss_pred CCCcCC
Confidence 987754
No 168
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.15 E-value=3.1e-06 Score=88.71 Aligned_cols=35 Identities=14% Similarity=0.302 Sum_probs=32.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 59 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
++.+|||||||++|+++|..|++.+++|+|||+++
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSS
T ss_pred CCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCC
Confidence 35789999999999999999999999999999984
No 169
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.14 E-value=1.3e-06 Score=92.13 Aligned_cols=34 Identities=35% Similarity=0.486 Sum_probs=32.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
+|||+||||||+|+++|..+++.|.+|+|+|+..
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~ 75 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVK 75 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccc
Confidence 6999999999999999999999999999999875
No 170
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.14 E-value=1.9e-06 Score=88.58 Aligned_cols=103 Identities=21% Similarity=0.249 Sum_probs=65.4
Q ss_pred cEEEECCCHHHHHHHHHHHhCC--CeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCe
Q 009785 62 DVIVVGAGVAGAALANTLAKDG--RRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (526)
Q Consensus 62 dVvIVGaG~aGl~~A~~La~~G--~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 139 (526)
+|+|||||++|+++|..|++.+ ++|+|+|+++.. ..+|...... .|..+. +
T Consensus 4 ~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~-------~~~p~l~~v~--~g~~~~-~----------------- 56 (430)
T 3hyw_A 4 HVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYF-------GFTPAFPHLA--MGWRKF-E----------------- 56 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEE-------ECGGGHHHHH--HTCSCG-G-----------------
T ss_pred cEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCC-------ccCccHHHHh--cCCCCH-H-----------------
Confidence 6999999999999999999865 899999998531 1223221111 111100 0
Q ss_pred eeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEee
Q 009785 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCD 219 (526)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~AD 219 (526)
. +.++ . .+.+.+. ++++..++|+++..+...| ..++|+ ++.+|++|.|+
T Consensus 57 ~--i~~~--------------~-------~~~~~~~-gv~~i~~~v~~Id~~~~~V-----~~~~g~--~i~YD~LViAt 105 (430)
T 3hyw_A 57 D--ISVP--------------L-------APLLPKF-NIEFINEKAESIDPDANTV-----TTQSGK--KIEYDYLVIAT 105 (430)
T ss_dssp G--SEEE--------------S-------TTTGGGG-TEEEECSCEEEEETTTTEE-----EETTCC--EEECSEEEECC
T ss_pred H--hhhc--------------H-------HHHHHHC-CcEEEEeEEEEEECCCCEE-----EECCCC--EEECCEEEEeC
Confidence 0 0000 0 0011222 7999999999998766632 356776 46799999999
Q ss_pred cCC
Q 009785 220 GCF 222 (526)
Q Consensus 220 G~~ 222 (526)
|..
T Consensus 106 G~~ 108 (430)
T 3hyw_A 106 GPK 108 (430)
T ss_dssp CCE
T ss_pred CCC
Confidence 974
No 171
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.12 E-value=2.6e-06 Score=86.99 Aligned_cols=34 Identities=26% Similarity=0.503 Sum_probs=31.6
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCe--EEEEecCCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRR--VHVIERDLS 94 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~--V~l~Er~~~ 94 (526)
.+|+|||||++|+++|..|+++|.+ |+|+|+.+.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~ 38 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPH 38 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSS
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCC
Confidence 4899999999999999999999987 999999864
No 172
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=98.11 E-value=2e-05 Score=83.44 Aligned_cols=57 Identities=16% Similarity=0.149 Sum_probs=44.0
Q ss_pred HHHHHHHHcCCCeEEEece-EEEEEeeC-CeEEEEEEEeC-CCcEEEEEcC-eEEEeecCC
Q 009785 166 QRLREKAASLPNVRLEQGT-VTSLLEEK-GTIKGVQYKTK-AGEELTAYAP-LTIVCDGCF 222 (526)
Q Consensus 166 ~~L~~~a~~~~~v~i~~~~-v~~l~~~~-~~v~gv~v~~~-~G~~~~i~a~-~vV~ADG~~ 222 (526)
..+++.+.+.++++++.++ |+++..++ +++.||++.+. +|+..+++|+ .||.|.|+.
T Consensus 212 ~a~l~~a~~~~~~~i~~~~~V~~i~~~~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~ 272 (546)
T 2jbv_A 212 VSYIHPIVEQENFTLLTGLRARQLVFDADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAI 272 (546)
T ss_dssp HHHTGGGTTCTTEEEECSCEEEEEEECTTSBEEEEEEESSTTSCEEEEEEEEEEEECSHHH
T ss_pred HHHHHHHhcCCCcEEEeCCEEEEEEECCCCeEEEEEEEECCCCcEEEEEeCccEEEecCcc
Confidence 4444445545689999885 99999876 78889998763 2777789998 999999984
No 173
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.10 E-value=1.6e-05 Score=89.92 Aligned_cols=35 Identities=40% Similarity=0.633 Sum_probs=32.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~ 94 (526)
++||+||||||+|+++|..|++.|++|+|+|+.+.
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~ 162 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAE 162 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCC
Confidence 57999999999999999999999999999999854
No 174
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.09 E-value=3.8e-06 Score=84.19 Aligned_cols=36 Identities=28% Similarity=0.564 Sum_probs=33.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERD-LSE 95 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~-~~~ 95 (526)
.+||+|||||++||++|+.|+++|++|+|+|++ ...
T Consensus 44 ~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~v 80 (376)
T 2e1m_A 44 PKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRV 80 (376)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCC
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCcEEEEecccccc
Confidence 579999999999999999999999999999998 543
No 175
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.08 E-value=3.7e-05 Score=75.22 Aligned_cols=99 Identities=20% Similarity=0.225 Sum_probs=74.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCee
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 140 (526)
-+|+|||+|+.|+-+|..|++.|.+|+++++.+....
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~------------------------------------------- 182 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRA------------------------------------------- 182 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCC-------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCcccc-------------------------------------------
Confidence 4799999999999999999999999999998742100
Q ss_pred eeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEec-eEEEEEeeCCeEEEEEEEeC-C-CcEEEEEcCeEEE
Q 009785 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTK-A-GEELTAYAPLTIV 217 (526)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~-~v~~l~~~~~~v~gv~v~~~-~-G~~~~i~a~~vV~ 217 (526)
...+.+.+.+.+++. +++++.+ +++++..+++++.+|++.+. + |+..++.+|.||.
T Consensus 183 --------------------~~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~ 241 (320)
T 1trb_A 183 --------------------EKILIKRLMDKVENG-NIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFV 241 (320)
T ss_dssp --------------------CHHHHHHHHHHHHTS-SEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEE
T ss_pred --------------------CHHHHHHHHHhcccC-CeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEE
Confidence 012344555666665 8999988 49999877667777877652 2 5445688999999
Q ss_pred eecCCc
Q 009785 218 CDGCFS 223 (526)
Q Consensus 218 ADG~~S 223 (526)
|.|...
T Consensus 242 a~G~~p 247 (320)
T 1trb_A 242 AIGHSP 247 (320)
T ss_dssp CSCEEE
T ss_pred EeCCCC
Confidence 999654
No 176
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.05 E-value=1.2e-05 Score=82.75 Aligned_cols=34 Identities=26% Similarity=0.455 Sum_probs=30.4
Q ss_pred CcEEEECCCHHHHHHHHHHHhCC--CeEEEEecCCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDG--RRVHVIERDLS 94 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G--~~V~l~Er~~~ 94 (526)
++|+||||||+|+++|..|++.| .+|+|+|+++.
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~ 36 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRD 36 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCC
Confidence 36999999999999999999988 57999999853
No 177
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.05 E-value=3.9e-06 Score=86.72 Aligned_cols=60 Identities=40% Similarity=0.432 Sum_probs=45.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCccc-----ce-------ee---CcchHHHHHHcCCcc
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIV-----GE-------LL---QPGGYLKLIELGLED 119 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~-----g~-------~l---~~~~~~~l~~lGl~~ 119 (526)
++||+|||||++||++|+.|++.|++|+|+|++.....+.. |. .+ .+...+.++++|+..
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~~g~~~ 79 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTIDGAVLEIGGQWVSPDQTALISLLDELGLKT 79 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEEETTEEEECSCCCBCTTCHHHHHHHHHTTCCE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceeccccCCceeccCCeEecCccHHHHHHHHHcCCcc
Confidence 57999999999999999999999999999999876554332 11 12 234456778888763
No 178
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.04 E-value=1e-05 Score=83.81 Aligned_cols=33 Identities=18% Similarity=0.344 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERD 92 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~ 92 (526)
++||+||||||+|+++|..|++.|.+|+|+|++
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 37 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ 37 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEccC
Confidence 589999999999999999999999999999994
No 179
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.03 E-value=3.1e-05 Score=77.28 Aligned_cols=99 Identities=20% Similarity=0.284 Sum_probs=74.3
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCee
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 140 (526)
-+|+|||+|+.|+-+|..|++.|.+|+++++.+.....
T Consensus 164 ~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~------------------------------------------ 201 (360)
T 3ab1_A 164 KRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQGH------------------------------------------ 201 (360)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSSC------------------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCCC------------------------------------------
Confidence 47999999999999999999999999999988531000
Q ss_pred eeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEec-eEEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEee
Q 009785 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCD 219 (526)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~-~v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~AD 219 (526)
..+.+.|.+..++. +++++.+ +++++..+++++.+|++...+|+..++.+|.||.|.
T Consensus 202 ---------------------~~~~~~l~~~~~~~-gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~ 259 (360)
T 3ab1_A 202 ---------------------GKTAHEVERARANG-TIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILI 259 (360)
T ss_dssp ---------------------SHHHHSSHHHHHHT-SEEEESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEEECC
T ss_pred ---------------------HHHHHHHHHHhhcC-ceEEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEEECC
Confidence 01122233334444 7999998 599998877777777776567766678899999999
Q ss_pred cCCc
Q 009785 220 GCFS 223 (526)
Q Consensus 220 G~~S 223 (526)
|...
T Consensus 260 G~~p 263 (360)
T 3ab1_A 260 GFKS 263 (360)
T ss_dssp CBCC
T ss_pred CCCC
Confidence 9654
No 180
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.03 E-value=5.1e-05 Score=73.89 Aligned_cols=95 Identities=25% Similarity=0.284 Sum_probs=72.2
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCee
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 140 (526)
-+|+|||+|+.|+-+|..|++.|.+|+++++.+... . +
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~--------------------~-~--------------------- 182 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK--------------------A-D--------------------- 182 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC--------------------S-C---------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC--------------------c-c---------------------
Confidence 479999999999999999999999999999885310 0 0
Q ss_pred eeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEEcCeEEEe
Q 009785 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKT-KAGEELTAYAPLTIVC 218 (526)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~-~~G~~~~i~a~~vV~A 218 (526)
+.+.+.+.+..+++++.++ ++++..+++++.+|++.+ .+|++.++.+|.||.|
T Consensus 183 -------------------------~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a 237 (310)
T 1fl2_A 183 -------------------------QVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQ 237 (310)
T ss_dssp -------------------------HHHHHHHHTCTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEEC
T ss_pred -------------------------HHHHHHHhhCCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEe
Confidence 1123334443489999884 999987767776788776 4576667899999999
Q ss_pred ecCC
Q 009785 219 DGCF 222 (526)
Q Consensus 219 DG~~ 222 (526)
.|..
T Consensus 238 ~G~~ 241 (310)
T 1fl2_A 238 IGLL 241 (310)
T ss_dssp SCEE
T ss_pred eCCc
Confidence 9854
No 181
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.03 E-value=1.2e-05 Score=82.09 Aligned_cols=35 Identities=29% Similarity=0.516 Sum_probs=32.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCC--eEEEEecCCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGR--RVHVIERDLS 94 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~--~V~l~Er~~~ 94 (526)
++||+|||||++|+++|..|++.|. +|+|+|+.+.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~ 43 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAE 43 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCS
T ss_pred CCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCC
Confidence 5899999999999999999999998 4999999864
No 182
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.02 E-value=3.7e-05 Score=79.73 Aligned_cols=99 Identities=19% Similarity=0.168 Sum_probs=72.8
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCee
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 140 (526)
-+|+|||||..|+-+|..|++.|.+|+|+|+.+..... +
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~~------------------~----------------------- 205 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQ------------------F----------------------- 205 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT------------------S-----------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccccc------------------c-----------------------
Confidence 47999999999999999999999999999988421000 0
Q ss_pred eeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEee
Q 009785 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCD 219 (526)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~AD 219 (526)
...+.+.+.+.+++. +++++.++ |+++..++++ +.+...+|+. ++.+|.||.|+
T Consensus 206 --------------------~~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~~~~---~~v~~~~G~~-~i~~D~vv~a~ 260 (463)
T 2r9z_A 206 --------------------DPLLSATLAENMHAQ-GIETHLEFAVAALERDAQG---TTLVAQDGTR-LEGFDSVIWAV 260 (463)
T ss_dssp --------------------CHHHHHHHHHHHHHT-TCEEESSCCEEEEEEETTE---EEEEETTCCE-EEEESEEEECS
T ss_pred --------------------CHHHHHHHHHHHHHC-CCEEEeCCEEEEEEEeCCe---EEEEEeCCcE-EEEcCEEEECC
Confidence 012334455556665 79999885 9999876664 4455667863 57799999999
Q ss_pred cCCccc
Q 009785 220 GCFSNL 225 (526)
Q Consensus 220 G~~S~v 225 (526)
|..+..
T Consensus 261 G~~p~~ 266 (463)
T 2r9z_A 261 GRAPNT 266 (463)
T ss_dssp CEEESC
T ss_pred CCCcCC
Confidence 987654
No 183
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.02 E-value=4.4e-05 Score=78.92 Aligned_cols=101 Identities=20% Similarity=0.290 Sum_probs=72.8
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCee
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 140 (526)
-+|+|||||+.|+-+|..|++.|.+|+|+|+.+.....
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 208 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSG------------------------------------------ 208 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc------------------------------------------
Confidence 57999999999999999999999999999998531100
Q ss_pred eeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEee
Q 009785 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCD 219 (526)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~AD 219 (526)
....+.+.+.+.+++. +++++.++ |+++..+++.+. +++.. +|+..++.+|.||.|.
T Consensus 209 -------------------~~~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~~~~~~-v~~~~-~g~~~~~~~D~vv~a~ 266 (455)
T 1ebd_A 209 -------------------FEKQMAAIIKKRLKKK-GVEVVTNALAKGAEEREDGVT-VTYEA-NGETKTIDADYVLVTV 266 (455)
T ss_dssp -------------------SCHHHHHHHHHHHHHT-TCEEEESEEEEEEEEETTEEE-EEEEE-TTEEEEEEESEEEECS
T ss_pred -------------------cCHHHHHHHHHHHHHC-CCEEEeCCEEEEEEEeCCeEE-EEEEe-CCceeEEEcCEEEECc
Confidence 0012445566666666 79999884 999987766432 44432 3444468899999999
Q ss_pred cCCccc
Q 009785 220 GCFSNL 225 (526)
Q Consensus 220 G~~S~v 225 (526)
|.....
T Consensus 267 G~~p~~ 272 (455)
T 1ebd_A 267 GRRPNT 272 (455)
T ss_dssp CEEESC
T ss_pred CCCccc
Confidence 976543
No 184
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.02 E-value=3.3e-05 Score=79.74 Aligned_cols=99 Identities=26% Similarity=0.354 Sum_probs=72.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCe
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 139 (526)
..+|+|||||++|+.+|..|++.|.+|+|+|+.+....+.
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~---------------------------------------- 188 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVY---------------------------------------- 188 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCccccccc----------------------------------------
Confidence 4689999999999999999999999999999985321100
Q ss_pred eeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEe
Q 009785 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVC 218 (526)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~A 218 (526)
....+.+.+.+.+++. +++++.++ |+++..+ +++..+. . +|+ ++.+|.||.|
T Consensus 189 --------------------~~~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~-~~v~~v~--~-~~~--~i~~d~vi~a 241 (447)
T 1nhp_A 189 --------------------LDKEFTDVLTEEMEAN-NITIATGETVERYEGD-GRVQKVV--T-DKN--AYDADLVVVA 241 (447)
T ss_dssp --------------------CCHHHHHHHHHHHHTT-TEEEEESCCEEEEECS-SBCCEEE--E-SSC--EEECSEEEEC
T ss_pred --------------------CCHHHHHHHHHHHHhC-CCEEEcCCEEEEEEcc-CcEEEEE--E-CCC--EEECCEEEEC
Confidence 0123556677777776 79999885 9998765 4433333 3 343 4779999999
Q ss_pred ecCCccc
Q 009785 219 DGCFSNL 225 (526)
Q Consensus 219 DG~~S~v 225 (526)
+|.....
T Consensus 242 ~G~~p~~ 248 (447)
T 1nhp_A 242 VGVRPNT 248 (447)
T ss_dssp SCEEESC
T ss_pred cCCCCCh
Confidence 9977653
No 185
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.00 E-value=8.5e-06 Score=83.78 Aligned_cols=41 Identities=24% Similarity=0.423 Sum_probs=36.1
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCC
Q 009785 57 CPFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPD 97 (526)
Q Consensus 57 ~~~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~ 97 (526)
|+.++||+|||||++|+++|..|++.|.+|+|+|++.....
T Consensus 3 ~~~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg 43 (433)
T 1d5t_A 3 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGG 43 (433)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccc
Confidence 34468999999999999999999999999999999865543
No 186
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.00 E-value=8.7e-05 Score=72.23 Aligned_cols=97 Identities=18% Similarity=0.139 Sum_probs=71.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCe
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 139 (526)
.-.|+|||+|+.|+-+|..|++.|.+|+++++.+.... .
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-------~---------------------------------- 181 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFRC-------A---------------------------------- 181 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCCS-------C----------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccCC-------C----------------------------------
Confidence 35799999999999999999999999999998742100 0
Q ss_pred eeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEEcCeEEE
Q 009785 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKT-KAGEELTAYAPLTIV 217 (526)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~-~~G~~~~i~a~~vV~ 217 (526)
..+.+.+.+..+++++.++ ++++..+++++.+|++.+ .+|++.++.+|.||.
T Consensus 182 --------------------------~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~ 235 (311)
T 2q0l_A 182 --------------------------PITLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFI 235 (311)
T ss_dssp --------------------------HHHHHHHHTCTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEE
T ss_pred --------------------------HHHHHHHhhCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEE
Confidence 0122333333489999885 899887767666677764 367666788999999
Q ss_pred eecCCc
Q 009785 218 CDGCFS 223 (526)
Q Consensus 218 ADG~~S 223 (526)
|.|...
T Consensus 236 a~G~~p 241 (311)
T 2q0l_A 236 FVGYDV 241 (311)
T ss_dssp CSCEEE
T ss_pred EecCcc
Confidence 999643
No 187
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.99 E-value=5.1e-05 Score=74.69 Aligned_cols=96 Identities=17% Similarity=0.174 Sum_probs=72.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCe
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 139 (526)
.-.|+|||+|+.|+-+|..|++.|.+|+++++.+....
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~------------------------------------------ 210 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA------------------------------------------ 210 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS------------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC------------------------------------------
Confidence 35799999999999999999999999999998853110
Q ss_pred eeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEEcCeEEE
Q 009785 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKT-KAGEELTAYAPLTIV 217 (526)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~-~~G~~~~i~a~~vV~ 217 (526)
...+.+.+.+..+++++.++ ++++..+++++.+|++.+ .+|+..++.+|.||.
T Consensus 211 -------------------------~~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~ 265 (338)
T 3itj_A 211 -------------------------STIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFY 265 (338)
T ss_dssp -------------------------CHHHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEE
T ss_pred -------------------------CHHHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEE
Confidence 01122333333489999885 999988777777788876 456556788999999
Q ss_pred eecCC
Q 009785 218 CDGCF 222 (526)
Q Consensus 218 ADG~~ 222 (526)
|.|..
T Consensus 266 a~G~~ 270 (338)
T 3itj_A 266 AIGHT 270 (338)
T ss_dssp CSCEE
T ss_pred EeCCC
Confidence 99964
No 188
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.99 E-value=5.8e-06 Score=84.65 Aligned_cols=38 Identities=29% Similarity=0.414 Sum_probs=34.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCC-CeEEEEecCCCCC
Q 009785 59 FDADVIVVGAGVAGAALANTLAKDG-RRVHVIERDLSEP 96 (526)
Q Consensus 59 ~~~dVvIVGaG~aGl~~A~~La~~G-~~V~l~Er~~~~~ 96 (526)
+++||+|||||++||++|+.|+++| .+|+|+|+++...
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~G 43 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVG 43 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCC
Confidence 3579999999999999999999999 9999999987654
No 189
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.99 E-value=4.6e-06 Score=84.79 Aligned_cols=38 Identities=34% Similarity=0.498 Sum_probs=34.5
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhC-CCeEEEEecCCCC
Q 009785 58 PFDADVIVVGAGVAGAALANTLAKD-GRRVHVIERDLSE 95 (526)
Q Consensus 58 ~~~~dVvIVGaG~aGl~~A~~La~~-G~~V~l~Er~~~~ 95 (526)
+.++||+|||||++||++|+.|+++ |.+|+|+|+++..
T Consensus 5 ~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~ 43 (399)
T 1v0j_A 5 TARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHI 43 (399)
T ss_dssp CCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSS
T ss_pred cccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 3468999999999999999999999 9999999998654
No 190
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.98 E-value=6.2e-06 Score=86.17 Aligned_cols=39 Identities=33% Similarity=0.400 Sum_probs=35.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCC
Q 009785 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPD 97 (526)
Q Consensus 59 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~ 97 (526)
+++||+|||||++||++|+.|+++|++|+|+|+++....
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG 48 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGG 48 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCC
Confidence 357999999999999999999999999999999876544
No 191
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.98 E-value=4.7e-05 Score=79.03 Aligned_cols=102 Identities=18% Similarity=0.211 Sum_probs=72.4
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCee
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 140 (526)
-.|+|||||..|+-+|..|++.|.+|+++|+.+.....
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 212 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPT------------------------------------------ 212 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT------------------------------------------
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccccc------------------------------------------
Confidence 47999999999999999999999999999998531100
Q ss_pred eeecCCCcCCCCCcccceeechHHHHHHHHHH-HcCCCeEEEec-eEEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEe
Q 009785 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKA-ASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVC 218 (526)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a-~~~~~v~i~~~-~v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~A 218 (526)
....+.+.+.+.+ ++. +++++.+ +|+++..+++.+ .+++.+.+|+..++.+|.||.|
T Consensus 213 -------------------~d~~~~~~l~~~l~~~~-gv~i~~~~~v~~i~~~~~~~-~v~~~~~~g~~~~i~~D~vv~a 271 (468)
T 2qae_A 213 -------------------LDEDVTNALVGALAKNE-KMKFMTSTKVVGGTNNGDSV-SLEVEGKNGKRETVTCEALLVS 271 (468)
T ss_dssp -------------------SCHHHHHHHHHHHHHHT-CCEEECSCEEEEEEECSSSE-EEEEECC---EEEEEESEEEEC
T ss_pred -------------------CCHHHHHHHHHHHhhcC-CcEEEeCCEEEEEEEcCCeE-EEEEEcCCCceEEEECCEEEEC
Confidence 0012445566666 555 8999988 599988765543 2444433665456889999999
Q ss_pred ecCCccc
Q 009785 219 DGCFSNL 225 (526)
Q Consensus 219 DG~~S~v 225 (526)
.|..+..
T Consensus 272 ~G~~p~~ 278 (468)
T 2qae_A 272 VGRRPFT 278 (468)
T ss_dssp SCEEECC
T ss_pred CCcccCC
Confidence 9987654
No 192
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.98 E-value=3.7e-05 Score=82.06 Aligned_cols=58 Identities=16% Similarity=0.206 Sum_probs=44.3
Q ss_pred HHHHHHHcCCCeEEEece-EEEEEeeC----CeEEEEEEEeCCCcEEEEEc-CeEEEeecCCcc
Q 009785 167 RLREKAASLPNVRLEQGT-VTSLLEEK----GTIKGVQYKTKAGEELTAYA-PLTIVCDGCFSN 224 (526)
Q Consensus 167 ~L~~~a~~~~~v~i~~~~-v~~l~~~~----~~v~gv~v~~~~G~~~~i~a-~~vV~ADG~~S~ 224 (526)
.++..+.+.++++++.++ |+++..++ ++++||++.+.+|+..+++| +-||.|.|+...
T Consensus 235 ~~l~~~~~~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~~~g~~~~v~A~k~VILaaG~~~s 298 (587)
T 1gpe_A 235 AWLLPNYQRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAIS 298 (587)
T ss_dssp HHTTTTTTCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTH
T ss_pred HHHHHhhcCCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEeCCCcEEEEEecccEEEccCCCCC
Confidence 333334445699999885 99998653 47899998866788788999 899999998754
No 193
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=97.98 E-value=8.2e-06 Score=86.47 Aligned_cols=57 Identities=23% Similarity=0.317 Sum_probs=43.3
Q ss_pred HHHHHHHHcCCCeEEEece-EEEEEee----C-CeEEEEEEEeCCC-cEEEEEc-CeEEEeecCC
Q 009785 166 QRLREKAASLPNVRLEQGT-VTSLLEE----K-GTIKGVQYKTKAG-EELTAYA-PLTIVCDGCF 222 (526)
Q Consensus 166 ~~L~~~a~~~~~v~i~~~~-v~~l~~~----~-~~v~gv~v~~~~G-~~~~i~a-~~vV~ADG~~ 222 (526)
...+..+.+++|++++.++ |+++..+ + ++++||++...+| +.++++| +-||.|.|+.
T Consensus 211 ~ayL~p~~~r~NL~Vlt~a~V~rIl~~~~~~g~~rA~GVe~~~~~g~~~~~v~A~kEVILsAGai 275 (566)
T 3fim_B 211 TAYLRPAQSRPNLSVLINAQVTKLVNSGTTNGLPAFRCVEYAEQEGAPTTTVCAKKEVVLSAGSV 275 (566)
T ss_dssp HHTHHHHTTCTTEEEESSCEEEEEECCEEETTEEECCEEEEESSTTSCCEEEEEEEEEEECCHHH
T ss_pred HHHhhhhccCCCeEEECCCEEEEEEeecCCCCCCEEEEEEEEECCCceEEEEEeeeEEEEecCCc
Confidence 3334445566799999885 9999876 3 5788999987766 7778888 7899999965
No 194
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.96 E-value=6.7e-06 Score=82.58 Aligned_cols=33 Identities=33% Similarity=0.566 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~ 94 (526)
-||+|||||++|+++|..|++.| +|+|+|+.+.
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~ 41 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPV 41 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSS
T ss_pred CcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCC
Confidence 59999999999999999999999 9999999864
No 195
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=97.96 E-value=3e-05 Score=78.73 Aligned_cols=104 Identities=18% Similarity=0.147 Sum_probs=65.0
Q ss_pred cEEEECCCHHHHHHHHHHHhCC--CeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCe
Q 009785 62 DVIVVGAGVAGAALANTLAKDG--RRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (526)
Q Consensus 62 dVvIVGaG~aGl~~A~~La~~G--~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 139 (526)
+|+|||||++|+++|..|++.| .+|+|+|+++.. ..+|.....+. |..+
T Consensus 4 kVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~-------~~~p~~~~v~~--g~~~-------------------- 54 (401)
T 3vrd_B 4 KVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETY-------YTCYMSNEVIG--GDRE-------------------- 54 (401)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSE-------ECSTTHHHHHH--TSSC--------------------
T ss_pred EEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCC-------CCccCHHHHhc--CCCC--------------------
Confidence 6999999999999999998866 689999987531 11222111110 1100
Q ss_pred eeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEee
Q 009785 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCD 219 (526)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~AD 219 (526)
......... . +.+. ++++..++|+++..+...+ ...+|. ++.+|++|.|+
T Consensus 55 --------------~~~~~~~~~----~----~~~~-gv~~i~~~v~~id~~~~~v-----~~~~g~--~i~yd~LviAt 104 (401)
T 3vrd_B 55 --------------LASLRVGYD----G----LRAH-GIQVVHDSALGIDPDKKLV-----KTAGGA--EFAYDRCVVAP 104 (401)
T ss_dssp --------------GGGGEECSH----H----HHHT-TCEEECSCEEEEETTTTEE-----EETTSC--EEECSEEEECC
T ss_pred --------------HHHHhhCHH----H----HHHC-CCEEEEeEEEEEEccCcEE-----Eecccc--eeecceeeecc
Confidence 000000111 1 1223 7999999999998766532 356676 46799999999
Q ss_pred cCCcc
Q 009785 220 GCFSN 224 (526)
Q Consensus 220 G~~S~ 224 (526)
|....
T Consensus 105 G~~~~ 109 (401)
T 3vrd_B 105 GIDLL 109 (401)
T ss_dssp CEEEC
T ss_pred CCccc
Confidence 97543
No 196
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.94 E-value=3e-05 Score=80.14 Aligned_cols=99 Identities=17% Similarity=0.181 Sum_probs=71.6
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCee
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 140 (526)
-+|+|||||+.|+-+|..|++.|.+|+|+|+.+..... +
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------~----------------------- 206 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLPS------------------F----------------------- 206 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT------------------S-----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhhh------------------h-----------------------
Confidence 47999999999999999999999999999998521000 0
Q ss_pred eeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEee
Q 009785 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCD 219 (526)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~AD 219 (526)
...+.+.|.+.+++. +++++.++ |+++..++++. +.+...+|+ ++.+|.||.|+
T Consensus 207 --------------------~~~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~~~~~--~~v~~~~g~--~i~~D~vv~a~ 261 (450)
T 1ges_A 207 --------------------DPMISETLVEVMNAE-GPQLHTNAIPKAVVKNTDGS--LTLELEDGR--SETVDCLIWAI 261 (450)
T ss_dssp --------------------CHHHHHHHHHHHHHH-SCEEECSCCEEEEEECTTSC--EEEEETTSC--EEEESEEEECS
T ss_pred --------------------hHHHHHHHHHHHHHC-CCEEEeCCEEEEEEEeCCcE--EEEEECCCc--EEEcCEEEECC
Confidence 012344555555555 79999885 99998765432 334456776 47799999999
Q ss_pred cCCccc
Q 009785 220 GCFSNL 225 (526)
Q Consensus 220 G~~S~v 225 (526)
|..+..
T Consensus 262 G~~p~~ 267 (450)
T 1ges_A 262 GREPAN 267 (450)
T ss_dssp CEEESC
T ss_pred CCCcCC
Confidence 987654
No 197
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.94 E-value=7.3e-05 Score=77.79 Aligned_cols=103 Identities=15% Similarity=0.244 Sum_probs=73.4
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCee
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 140 (526)
-+|+|||||+.|+-+|..|++.|.+|+|+|+.+..... +
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-----~------------------------------------ 222 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGAS-----M------------------------------------ 222 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSS-----S------------------------------------
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccc-----c------------------------------------
Confidence 47999999999999999999999999999998531100 0
Q ss_pred eeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEee-CCeEEEEEEEe-CCCcEEEEEcCeEEE
Q 009785 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEE-KGTIKGVQYKT-KAGEELTAYAPLTIV 217 (526)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~-~~~v~gv~v~~-~~G~~~~i~a~~vV~ 217 (526)
...+.+.+.+.+++. +++++.++ |+++..+ ++....+++.+ .+|+..++.+|.||.
T Consensus 223 --------------------~~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~ 281 (478)
T 1v59_A 223 --------------------DGEVAKATQKFLKKQ-GLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLV 281 (478)
T ss_dssp --------------------CHHHHHHHHHHHHHT-TCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEE
T ss_pred --------------------CHHHHHHHHHHHHHC-CCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEE
Confidence 013455666666666 89999885 8898762 33333455542 234445688999999
Q ss_pred eecCCccc
Q 009785 218 CDGCFSNL 225 (526)
Q Consensus 218 ADG~~S~v 225 (526)
|.|.....
T Consensus 282 a~G~~p~~ 289 (478)
T 1v59_A 282 AVGRRPYI 289 (478)
T ss_dssp CSCEEECC
T ss_pred CCCCCcCC
Confidence 99977654
No 198
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.92 E-value=7.7e-05 Score=78.55 Aligned_cols=102 Identities=18% Similarity=0.229 Sum_probs=76.5
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCee
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 140 (526)
-+|+|||||..|+-+|..|++.|.+|+++|+.+.....
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~------------------------------------------ 252 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLI------------------------------------------ 252 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTC------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccccc------------------------------------------
Confidence 57999999999999999999999999999998531100
Q ss_pred eeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeC-CeEEEEEEEeCCCcEEEEEcCeEEEe
Q 009785 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEK-GTIKGVQYKTKAGEELTAYAPLTIVC 218 (526)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~-~~v~gv~v~~~~G~~~~i~a~~vV~A 218 (526)
....+.+.|.+.+++. +++++.++ |+++..++ +.+.++.+...+|+ .++.+|.||.|
T Consensus 253 -------------------~~~~~~~~l~~~l~~~-GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~-~~i~aD~Vv~A 311 (523)
T 1mo9_A 253 -------------------KDNETRAYVLDRMKEQ-GMEIISGSNVTRIEEDANGRVQAVVAMTPNGE-MRIETDFVFLG 311 (523)
T ss_dssp -------------------CSHHHHHHHHHHHHHT-TCEEESSCEEEEEEECTTSBEEEEEEEETTEE-EEEECSCEEEC
T ss_pred -------------------ccHHHHHHHHHHHHhC-CcEEEECCEEEEEEEcCCCceEEEEEEECCCc-EEEEcCEEEEC
Confidence 0112455666666666 79999884 99998643 44544566677775 35789999999
Q ss_pred ecCCccc
Q 009785 219 DGCFSNL 225 (526)
Q Consensus 219 DG~~S~v 225 (526)
.|..+..
T Consensus 312 ~G~~p~~ 318 (523)
T 1mo9_A 312 LGEQPRS 318 (523)
T ss_dssp CCCEECC
T ss_pred cCCccCC
Confidence 9988765
No 199
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.92 E-value=5.1e-06 Score=87.54 Aligned_cols=39 Identities=36% Similarity=0.545 Sum_probs=35.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCC-CeEEEEecCCCCCCc
Q 009785 60 DADVIVVGAGVAGAALANTLAKDG-RRVHVIERDLSEPDR 98 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G-~~V~l~Er~~~~~~~ 98 (526)
++||+|||||++||++|..|++.| .+|+|+|++.....+
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr 47 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGR 47 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTT
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCc
Confidence 579999999999999999999999 999999999766544
No 200
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.92 E-value=8e-06 Score=82.49 Aligned_cols=37 Identities=41% Similarity=0.629 Sum_probs=34.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCC
Q 009785 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSE 95 (526)
Q Consensus 59 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~ 95 (526)
.++||+|||||++|+++|+.|+++|.+|+|+|+++..
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~ 64 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHI 64 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCC
Confidence 4689999999999999999999999999999998654
No 201
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.92 E-value=9.6e-05 Score=71.89 Aligned_cols=95 Identities=21% Similarity=0.196 Sum_probs=72.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCee
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 140 (526)
-.|+|||+|+.|+-+|..|++.|.+|+++++.+.... .
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~~---------~--------------------------------- 185 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFRA---------A--------------------------------- 185 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCBS---------C---------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCCC---------C---------------------------------
Confidence 5799999999999999999999999999998743100 0
Q ss_pred eeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEec-eEEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEee
Q 009785 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCD 219 (526)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~-~v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~AD 219 (526)
..+.+ +.+++ .+++++.+ +++++..+++++.+|++...+|+..++.+|.||.|.
T Consensus 186 ---------------------~~~~~---~~~~~-~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~ 240 (315)
T 3r9u_A 186 ---------------------PSTVE---KVKKN-EKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFV 240 (315)
T ss_dssp ---------------------HHHHH---HHHHC-TTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCEEECS
T ss_pred ---------------------HHHHH---HHHhc-CCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeEEEEE
Confidence 01111 11223 48999977 499998888788788887778877778999999999
Q ss_pred cCC
Q 009785 220 GCF 222 (526)
Q Consensus 220 G~~ 222 (526)
|..
T Consensus 241 G~~ 243 (315)
T 3r9u_A 241 GLN 243 (315)
T ss_dssp CEE
T ss_pred cCC
Confidence 954
No 202
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=97.90 E-value=0.00011 Score=75.06 Aligned_cols=101 Identities=21% Similarity=0.299 Sum_probs=75.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCe
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 139 (526)
.-+|+|||+|..|+-+|..|++.|.+|+++|+.+....+.
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~---------------------------------------- 191 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARV---------------------------------------- 191 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhh----------------------------------------
Confidence 3479999999999999999999999999999985321100
Q ss_pred eeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEe
Q 009785 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVC 218 (526)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~A 218 (526)
....+.+.+.+.+++. +++++.++ |+++..+++++.+|+ ..+|+ ++.+|.||.|
T Consensus 192 --------------------~~~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~v~~v~--l~dG~--~i~aD~Vv~a 246 (415)
T 3lxd_A 192 --------------------AGEALSEFYQAEHRAH-GVDLRTGAAMDCIEGDGTKVTGVR--MQDGS--VIPADIVIVG 246 (415)
T ss_dssp --------------------SCHHHHHHHHHHHHHT-TCEEEETCCEEEEEESSSBEEEEE--ESSSC--EEECSEEEEC
T ss_pred --------------------cCHHHHHHHHHHHHhC-CCEEEECCEEEEEEecCCcEEEEE--eCCCC--EEEcCEEEEC
Confidence 0123455666666666 89999885 999987777665554 46676 4679999999
Q ss_pred ecCCccc
Q 009785 219 DGCFSNL 225 (526)
Q Consensus 219 DG~~S~v 225 (526)
.|.....
T Consensus 247 ~G~~p~~ 253 (415)
T 3lxd_A 247 IGIVPCV 253 (415)
T ss_dssp SCCEESC
T ss_pred CCCccCh
Confidence 9987653
No 203
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.90 E-value=9.5e-05 Score=75.15 Aligned_cols=100 Identities=25% Similarity=0.389 Sum_probs=75.3
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCee
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 140 (526)
-+|+|||+|..|+-+|..|++.|.+|+++|+.+....+.
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~----------------------------------------- 181 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARV----------------------------------------- 181 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTT-----------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhc-----------------------------------------
Confidence 479999999999999999999999999999985321000
Q ss_pred eeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEee
Q 009785 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCD 219 (526)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~AD 219 (526)
....+.+.+.+.+++. +++++.++ |+++..+++++.+|+ ..+|+ ++.+|.||.|.
T Consensus 182 -------------------~~~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~v~~V~--~~dG~--~i~aD~Vv~a~ 237 (404)
T 3fg2_P 182 -------------------VTPEISSYFHDRHSGA-GIRMHYGVRATEIAAEGDRVTGVV--LSDGN--TLPCDLVVVGV 237 (404)
T ss_dssp -------------------SCHHHHHHHHHHHHHT-TCEEECSCCEEEEEEETTEEEEEE--ETTSC--EEECSEEEECC
T ss_pred -------------------cCHHHHHHHHHHHHhC-CcEEEECCEEEEEEecCCcEEEEE--eCCCC--EEEcCEEEECc
Confidence 0123455666666666 89999884 999988777665554 56776 46799999999
Q ss_pred cCCccc
Q 009785 220 GCFSNL 225 (526)
Q Consensus 220 G~~S~v 225 (526)
|.....
T Consensus 238 G~~p~~ 243 (404)
T 3fg2_P 238 GVIPNV 243 (404)
T ss_dssp CEEECC
T ss_pred CCccCH
Confidence 986543
No 204
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.89 E-value=0.0001 Score=77.00 Aligned_cols=101 Identities=23% Similarity=0.312 Sum_probs=74.1
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCee
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 140 (526)
-+|+|||||..|+-+|..|++.|.+|+++|+.+.....
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 212 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANL------------------------------------------ 212 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTC------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc------------------------------------------
Confidence 47999999999999999999999999999998531100
Q ss_pred eeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEee
Q 009785 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCD 219 (526)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~AD 219 (526)
....+.+.+.+.+++. ++++.++ ++++..+++.+. +++.+.+|+..++.+|.||.|.
T Consensus 213 -------------------~d~~~~~~l~~~l~~~--V~i~~~~~v~~i~~~~~~v~-v~~~~~~G~~~~i~~D~Vi~a~ 270 (492)
T 3ic9_A 213 -------------------QDEEMKRYAEKTFNEE--FYFDAKARVISTIEKEDAVE-VIYFDKSGQKTTESFQYVLAAT 270 (492)
T ss_dssp -------------------CCHHHHHHHHHHHHTT--SEEETTCEEEEEEECSSSEE-EEEECTTCCEEEEEESEEEECS
T ss_pred -------------------CCHHHHHHHHHHHhhC--cEEEECCEEEEEEEcCCEEE-EEEEeCCCceEEEECCEEEEee
Confidence 0013445555655553 8888885 888887766543 5544457765678899999999
Q ss_pred cCCccc
Q 009785 220 GCFSNL 225 (526)
Q Consensus 220 G~~S~v 225 (526)
|.....
T Consensus 271 G~~p~~ 276 (492)
T 3ic9_A 271 GRKANV 276 (492)
T ss_dssp CCEESC
T ss_pred CCccCC
Confidence 986543
No 205
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.89 E-value=9.3e-05 Score=77.30 Aligned_cols=102 Identities=25% Similarity=0.362 Sum_probs=75.1
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCee
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 140 (526)
-+|+|||||..|+-+|..|++.|.+|+++|+.+.....
T Consensus 199 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 236 (491)
T 3urh_A 199 ASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGG------------------------------------------ 236 (491)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSS------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccccc------------------------------------------
Confidence 47999999999999999999999999999987521000
Q ss_pred eeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeC-CCcEEEEEcCeEEEe
Q 009785 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTK-AGEELTAYAPLTIVC 218 (526)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~-~G~~~~i~a~~vV~A 218 (526)
....+.+.+.+.+++. +++++.++ ++++..+++.+. +++.+. +|+..++.+|.||.|
T Consensus 237 -------------------~d~~~~~~l~~~l~~~-gV~v~~~~~v~~i~~~~~~~~-v~~~~~~~g~~~~i~~D~Vi~a 295 (491)
T 3urh_A 237 -------------------MDGEVAKQLQRMLTKQ-GIDFKLGAKVTGAVKSGDGAK-VTFEPVKGGEATTLDAEVVLIA 295 (491)
T ss_dssp -------------------SCHHHHHHHHHHHHHT-TCEEECSEEEEEEEEETTEEE-EEEEETTSCCCEEEEESEEEEC
T ss_pred -------------------CCHHHHHHHHHHHHhC-CCEEEECCeEEEEEEeCCEEE-EEEEecCCCceEEEEcCEEEEe
Confidence 0013455566666665 89999885 999988776543 556553 365456889999999
Q ss_pred ecCCccc
Q 009785 219 DGCFSNL 225 (526)
Q Consensus 219 DG~~S~v 225 (526)
.|.....
T Consensus 296 ~G~~p~~ 302 (491)
T 3urh_A 296 TGRKPST 302 (491)
T ss_dssp CCCEECC
T ss_pred eCCccCC
Confidence 9976543
No 206
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.87 E-value=3.3e-05 Score=79.94 Aligned_cols=98 Identities=22% Similarity=0.275 Sum_probs=70.1
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCee
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 140 (526)
-+|+|||||++|+-+|..|++.|.+|+|+|+.+.....
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 209 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPT------------------------------------------ 209 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT------------------------------------------
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccccc------------------------------------------
Confidence 47999999999999999999999999999998531100
Q ss_pred eeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEec-eEEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEee
Q 009785 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCD 219 (526)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~-~v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~AD 219 (526)
....+.+.+.+.+++. +++++.+ +|+++.. ++ +.+...+|+..++.+|.||.|.
T Consensus 210 -------------------~~~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~--~~---v~v~~~~G~~~~i~~D~vv~a~ 264 (458)
T 1lvl_A 210 -------------------YDSELTAPVAESLKKL-GIALHLGHSVEGYEN--GC---LLANDGKGGQLRLEADRVLVAV 264 (458)
T ss_dssp -------------------SCHHHHHHHHHHHHHH-TCEEETTCEEEEEET--TE---EEEECSSSCCCEECCSCEEECC
T ss_pred -------------------cCHHHHHHHHHHHHHC-CCEEEECCEEEEEEe--CC---EEEEECCCceEEEECCEEEECc
Confidence 0012334455555555 7999988 4888876 33 3344455643467899999999
Q ss_pred cCCccc
Q 009785 220 GCFSNL 225 (526)
Q Consensus 220 G~~S~v 225 (526)
|.....
T Consensus 265 G~~p~~ 270 (458)
T 1lvl_A 265 GRRPRT 270 (458)
T ss_dssp CEEECC
T ss_pred CCCcCC
Confidence 976654
No 207
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.85 E-value=7.7e-05 Score=77.68 Aligned_cols=100 Identities=17% Similarity=0.207 Sum_probs=71.0
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCee
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 140 (526)
-+|+|||||..|+-+|..|++.|.+|+++|+.+..-.. +
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------~----------------------- 224 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRK------------------F----------------------- 224 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCTT------------------S-----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccccc------------------c-----------------------
Confidence 47999999999999999999999999999998531000 0
Q ss_pred eeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCe-EEEEEEEeCCCcEEEEEcCeEEEe
Q 009785 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGT-IKGVQYKTKAGEELTAYAPLTIVC 218 (526)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~-v~gv~v~~~~G~~~~i~a~~vV~A 218 (526)
...+.+.+.+.+++. +++++.++ |+++..++++ + +.+...+|+ .++.+|.||.|
T Consensus 225 --------------------d~~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~~~~~~--~~v~~~~G~-~~i~~D~vv~a 280 (479)
T 2hqm_A 225 --------------------DECIQNTITDHYVKE-GINVHKLSKIVKVEKNVETDK--LKIHMNDSK-SIDDVDELIWT 280 (479)
T ss_dssp --------------------CHHHHHHHHHHHHHH-TCEEECSCCEEEEEECC-CCC--EEEEETTSC-EEEEESEEEEC
T ss_pred --------------------CHHHHHHHHHHHHhC-CeEEEeCCEEEEEEEcCCCcE--EEEEECCCc-EEEEcCEEEEC
Confidence 012334455555555 79999885 9999865432 2 334456773 35789999999
Q ss_pred ecCCccc
Q 009785 219 DGCFSNL 225 (526)
Q Consensus 219 DG~~S~v 225 (526)
.|.....
T Consensus 281 ~G~~p~~ 287 (479)
T 2hqm_A 281 IGRKSHL 287 (479)
T ss_dssp SCEEECC
T ss_pred CCCCCcc
Confidence 9987665
No 208
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.85 E-value=7.8e-05 Score=77.16 Aligned_cols=143 Identities=15% Similarity=0.147 Sum_probs=80.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhC--CCeEEEEecCCCCCCcc----cceeeCcchHHHHHHcCCcchhhcccceeeeeeE
Q 009785 60 DADVIVVGAGVAGAALANTLAKD--GRRVHVIERDLSEPDRI----VGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYA 133 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~--G~~V~l~Er~~~~~~~~----~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~ 133 (526)
.-+|+|||||.+|+-+|..|++. |.+|++++|.+...+.. ......|...+.+..+.-.....-.....
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~----- 301 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPADDSPFVNEVFAPKFTDLIYSREHAERERLLREYH----- 301 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTG-----
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCccCCccchhccChhHHHHHhcCCHHHHHHHHHHhh-----
Confidence 45799999999999999999998 89999999986432211 11122333333333322110000000000
Q ss_pred EEECCeeeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeC-CCcEEEEE
Q 009785 134 LFKDGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTK-AGEELTAY 211 (526)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~-~G~~~~i~ 211 (526)
...+. .....+-.......+.+.+....+++++.++ |+++..+++.+. +++.+. +|+..++.
T Consensus 302 --------~~~~~-------~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~~~-v~~~~~~~g~~~~~~ 365 (463)
T 3s5w_A 302 --------NTNYS-------VVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQGIE-LALRDAGSGELSVET 365 (463)
T ss_dssp --------GGTSS-------CBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEETTEEE-EEEEETTTCCEEEEE
T ss_pred --------ccCCC-------cCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCCEEE-EEEEEcCCCCeEEEE
Confidence 00000 0000001111223334444444589999986 889887776543 555543 78777789
Q ss_pred cCeEEEeecCCc
Q 009785 212 APLTIVCDGCFS 223 (526)
Q Consensus 212 a~~vV~ADG~~S 223 (526)
+|.||.|+|...
T Consensus 366 ~D~Vv~AtG~~p 377 (463)
T 3s5w_A 366 YDAVILATGYER 377 (463)
T ss_dssp ESEEEECCCEEC
T ss_pred CCEEEEeeCCCC
Confidence 999999999653
No 209
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.84 E-value=0.00012 Score=71.72 Aligned_cols=95 Identities=21% Similarity=0.277 Sum_probs=70.1
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCee
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 140 (526)
-+|+|||+|+.|+-+|..|++.|.+|+++++.+....
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~~------------------------------------------- 192 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMC------------------------------------------- 192 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCCS-------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccCC-------------------------------------------
Confidence 4799999999999999999999999999998742100
Q ss_pred eeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEEcCeEEEe
Q 009785 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKT-KAGEELTAYAPLTIVC 218 (526)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~-~~G~~~~i~a~~vV~A 218 (526)
. ..+.+.+.+. +++++.++ ++++..+++++.+|++.+ .+|+..++.+|.||.|
T Consensus 193 --------------------~----~~l~~~l~~~-gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a 247 (319)
T 3cty_A 193 --------------------E----NAYVQEIKKR-NIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIY 247 (319)
T ss_dssp --------------------C----HHHHHHHHHT-TCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEEC
T ss_pred --------------------C----HHHHHHHhcC-CcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEe
Confidence 0 0122223333 78888884 899887666566777765 4676667899999999
Q ss_pred ecCCc
Q 009785 219 DGCFS 223 (526)
Q Consensus 219 DG~~S 223 (526)
.|...
T Consensus 248 ~G~~p 252 (319)
T 3cty_A 248 VGLIP 252 (319)
T ss_dssp CCEEE
T ss_pred eCCcc
Confidence 98643
No 210
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.84 E-value=5.1e-05 Score=78.76 Aligned_cols=102 Identities=16% Similarity=0.243 Sum_probs=73.3
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCee
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 140 (526)
-+|+|||||+.|+-+|..|++.|.+|+|+|+.+.....
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~------------------------------------------ 215 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPT------------------------------------------ 215 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc------------------------------------------
Confidence 47999999999999999999999999999998531100
Q ss_pred eeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeC-CCcEEEEEcCeEEEe
Q 009785 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTK-AGEELTAYAPLTIVC 218 (526)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~-~G~~~~i~a~~vV~A 218 (526)
....+.+.+.+.+++. +++++.++ |+++..+++.+ .+++.+. +|+..++.+|.||.|
T Consensus 216 -------------------~~~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~~~~~-~v~~~~~~~g~~~~~~~D~vv~a 274 (470)
T 1dxl_A 216 -------------------MDAEIRKQFQRSLEKQ-GMKFKLKTKVVGVDTSGDGV-KLTVEPSAGGEQTIIEADVVLVS 274 (470)
T ss_dssp -------------------SCHHHHHHHHHHHHHS-SCCEECSEEEEEEECSSSSE-EEEEEESSSCCCEEEEESEEECC
T ss_pred -------------------ccHHHHHHHHHHHHHc-CCEEEeCCEEEEEEEcCCeE-EEEEEecCCCcceEEECCEEEEC
Confidence 0012445566666666 79999885 99988665543 3554432 454346889999999
Q ss_pred ecCCccc
Q 009785 219 DGCFSNL 225 (526)
Q Consensus 219 DG~~S~v 225 (526)
.|.....
T Consensus 275 ~G~~p~~ 281 (470)
T 1dxl_A 275 AGRTPFT 281 (470)
T ss_dssp CCEEECC
T ss_pred CCCCcCC
Confidence 9987643
No 211
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.83 E-value=2e-05 Score=82.50 Aligned_cols=39 Identities=38% Similarity=0.551 Sum_probs=35.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCc
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDR 98 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~ 98 (526)
.+||+|||||++||++|..|+++|++|+|+|+++....+
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~ 71 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGR 71 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTT
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCc
Confidence 579999999999999999999999999999998765443
No 212
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.81 E-value=1.1e-05 Score=80.87 Aligned_cols=36 Identities=42% Similarity=0.514 Sum_probs=33.3
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEP 96 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~ 96 (526)
+||+|||||++|+++|..|+++|.+|+|+|+++...
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~G 37 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIG 37 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCC
Confidence 699999999999999999999999999999986543
No 213
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.81 E-value=1.3e-05 Score=83.16 Aligned_cols=34 Identities=38% Similarity=0.569 Sum_probs=32.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecC
Q 009785 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERD 92 (526)
Q Consensus 59 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~ 92 (526)
.++||+|||||++|+++|..|++.|.+|+|+|++
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~ 36 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK 36 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC
Confidence 3689999999999999999999999999999997
No 214
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.81 E-value=9.1e-05 Score=76.77 Aligned_cols=100 Identities=20% Similarity=0.263 Sum_probs=71.1
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCee
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 140 (526)
-+|+|||||..|+-+|..|++.|.+|+|+|+.+..-+.
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 209 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALPN------------------------------------------ 209 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT------------------------------------------
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccccc------------------------------------------
Confidence 47999999999999999999999999999998531000
Q ss_pred eeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEee
Q 009785 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCD 219 (526)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~AD 219 (526)
....+.+.+.+.+++. +++++.++ ++++..+++.+. +++. .+|+..++.+|.||.|.
T Consensus 210 -------------------~~~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~~~~~~-v~~~-~~g~~~~~~~D~vv~a~ 267 (464)
T 2a8x_A 210 -------------------EDADVSKEIEKQFKKL-GVTILTATKVESIADGGSQVT-VTVT-KDGVAQELKAEKVLQAI 267 (464)
T ss_dssp -------------------SCHHHHHHHHHHHHHH-TCEEECSCEEEEEEECSSCEE-EEEE-SSSCEEEEEESEEEECS
T ss_pred -------------------cCHHHHHHHHHHHHHc-CCEEEeCcEEEEEEEcCCeEE-EEEE-cCCceEEEEcCEEEECC
Confidence 0012334455555555 79999884 899887655432 4433 25654568899999999
Q ss_pred cCCcc
Q 009785 220 GCFSN 224 (526)
Q Consensus 220 G~~S~ 224 (526)
|....
T Consensus 268 G~~p~ 272 (464)
T 2a8x_A 268 GFAPN 272 (464)
T ss_dssp CEEEC
T ss_pred CCCcc
Confidence 97654
No 215
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.80 E-value=0.00016 Score=71.11 Aligned_cols=97 Identities=20% Similarity=0.246 Sum_probs=70.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCe
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 139 (526)
.-+|+|||+|..|+-+|..|++.|.+|+++++.+....
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~------------------------------------------ 196 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRA------------------------------------------ 196 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCCS------------------------------------------
T ss_pred CCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCCc------------------------------------------
Confidence 34799999999999999999999999999999853100
Q ss_pred eeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCC--eEEEEEEEe-CCCcEEEEEcCeE
Q 009785 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKG--TIKGVQYKT-KAGEELTAYAPLT 215 (526)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~--~v~gv~v~~-~~G~~~~i~a~~v 215 (526)
. +.+.+.+.+..+++++.++ ++++..+++ ++.+|++.+ .+|+..++.+|.|
T Consensus 197 ---------------------~----~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~v 251 (333)
T 1vdc_A 197 ---------------------S----KIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGL 251 (333)
T ss_dssp ---------------------C----HHHHHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEE
T ss_pred ---------------------c----HHHHHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEE
Confidence 0 1112222233489999874 888886654 666677765 3676667899999
Q ss_pred EEeecCCc
Q 009785 216 IVCDGCFS 223 (526)
Q Consensus 216 V~ADG~~S 223 (526)
|.|.|...
T Consensus 252 i~a~G~~p 259 (333)
T 1vdc_A 252 FFAIGHEP 259 (333)
T ss_dssp EECSCEEE
T ss_pred EEEeCCcc
Confidence 99999643
No 216
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.79 E-value=0.00027 Score=69.30 Aligned_cols=95 Identities=22% Similarity=0.270 Sum_probs=70.0
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCee
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 140 (526)
-+|+|||+|..|+-+|..|++.|.+|+++++.+.... .
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~---------~--------------------------------- 190 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRA---------N--------------------------------- 190 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCS---------C---------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCCc---------c---------------------------------
Confidence 4799999999999999999999999999998742100 0
Q ss_pred eeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEEcCeEEEe
Q 009785 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKT-KAGEELTAYAPLTIVC 218 (526)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~-~~G~~~~i~a~~vV~A 218 (526)
..+.+.+.+..+++++.++ ++++..+ +++.+|++.+ .+|+..++.+|.||.|
T Consensus 191 -------------------------~~~~~~l~~~~gv~i~~~~~v~~i~~~-~~v~~v~~~~~~~g~~~~i~~D~vi~a 244 (325)
T 2q7v_A 191 -------------------------KVAQARAFANPKMKFIWDTAVEEIQGA-DSVSGVKLRNLKTGEVSELATDGVFIF 244 (325)
T ss_dssp -------------------------HHHHHHHHTCTTEEEECSEEEEEEEES-SSEEEEEEEETTTCCEEEEECSEEEEC
T ss_pred -------------------------hHHHHHHHhcCCceEecCCceEEEccC-CcEEEEEEEECCCCcEEEEEcCEEEEc
Confidence 0122233343489999885 8888764 5566677765 4677667899999999
Q ss_pred ecCCc
Q 009785 219 DGCFS 223 (526)
Q Consensus 219 DG~~S 223 (526)
.|...
T Consensus 245 ~G~~p 249 (325)
T 2q7v_A 245 IGHVP 249 (325)
T ss_dssp SCEEE
T ss_pred cCCCC
Confidence 98543
No 217
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.79 E-value=1.9e-05 Score=79.85 Aligned_cols=37 Identities=32% Similarity=0.642 Sum_probs=33.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEP 96 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~ 96 (526)
++||+|||||++|+++|..|+++|.+|+|+|+++...
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~G 39 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIG 39 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcC
Confidence 4799999999999999999999999999999986543
No 218
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.78 E-value=0.00023 Score=73.98 Aligned_cols=100 Identities=21% Similarity=0.224 Sum_probs=73.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCee
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 140 (526)
-+|+|||||+.|+-+|..|++.|.+|+++|+.+.....
T Consensus 181 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 218 (476)
T 3lad_A 181 GKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPA------------------------------------------ 218 (476)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCcc------------------------------------------
Confidence 47999999999999999999999999999997521000
Q ss_pred eeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEee
Q 009785 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCD 219 (526)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~AD 219 (526)
....+.+.+.+.+++. +++++.++ ++++..+++.+. +++.+.+| ..++.+|.||.|.
T Consensus 219 -------------------~~~~~~~~l~~~l~~~-Gv~v~~~~~v~~i~~~~~~~~-v~~~~~~g-~~~~~~D~vi~a~ 276 (476)
T 3lad_A 219 -------------------VDEQVAKEAQKILTKQ-GLKILLGARVTGTEVKNKQVT-VKFVDAEG-EKSQAFDKLIVAV 276 (476)
T ss_dssp -------------------SCHHHHHHHHHHHHHT-TEEEEETCEEEEEEECSSCEE-EEEESSSE-EEEEEESEEEECS
T ss_pred -------------------cCHHHHHHHHHHHHhC-CCEEEECCEEEEEEEcCCEEE-EEEEeCCC-cEEEECCEEEEee
Confidence 0112455566666665 89999884 999887666543 55555555 3568899999999
Q ss_pred cCCcc
Q 009785 220 GCFSN 224 (526)
Q Consensus 220 G~~S~ 224 (526)
|....
T Consensus 277 G~~p~ 281 (476)
T 3lad_A 277 GRRPV 281 (476)
T ss_dssp CEEEC
T ss_pred CCccc
Confidence 97543
No 219
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.78 E-value=0.00021 Score=70.33 Aligned_cols=98 Identities=16% Similarity=0.203 Sum_probs=72.3
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCee
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 140 (526)
-+|+|||+|..|+-+|..|++.|.+|+++++.+....
T Consensus 153 ~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~------------------------------------------- 189 (335)
T 2zbw_A 153 KRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRA------------------------------------------- 189 (335)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCS-------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCc-------------------------------------------
Confidence 4799999999999999999999999999999852100
Q ss_pred eeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEec-eEEEEEeeCCeEEEEEEEeC-CCcEEEEEcCeEEEe
Q 009785 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTK-AGEELTAYAPLTIVC 218 (526)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~-~v~~l~~~~~~v~gv~v~~~-~G~~~~i~a~~vV~A 218 (526)
...+.+.|.+.+++. +++++.+ +++++..+ +++.+|++... +|+..++.+|.||.|
T Consensus 190 --------------------~~~~~~~l~~~l~~~-gv~v~~~~~v~~i~~~-~~~~~v~~~~~~~g~~~~i~~D~vi~a 247 (335)
T 2zbw_A 190 --------------------HEASVKELMKAHEEG-RLEVLTPYELRRVEGD-ERVRWAVVFHNQTQEELALEVDAVLIL 247 (335)
T ss_dssp --------------------CHHHHHHHHHHHHTT-SSEEETTEEEEEEEES-SSEEEEEEEETTTCCEEEEECSEEEEC
T ss_pred --------------------cHHHHHHHHhccccC-CeEEecCCcceeEccC-CCeeEEEEEECCCCceEEEecCEEEEe
Confidence 001223455555555 8999988 48888774 55556776643 676567889999999
Q ss_pred ecCCc
Q 009785 219 DGCFS 223 (526)
Q Consensus 219 DG~~S 223 (526)
.|...
T Consensus 248 ~G~~p 252 (335)
T 2zbw_A 248 AGYIT 252 (335)
T ss_dssp CCEEE
T ss_pred ecCCC
Confidence 99654
No 220
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.78 E-value=1.3e-05 Score=82.78 Aligned_cols=34 Identities=32% Similarity=0.433 Sum_probs=32.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecC
Q 009785 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERD 92 (526)
Q Consensus 59 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~ 92 (526)
.++||+|||||++|+++|..|++.|.+|+|+|++
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~ 36 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAK 36 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC
Confidence 3689999999999999999999999999999997
No 221
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.77 E-value=2.1e-05 Score=82.93 Aligned_cols=37 Identities=30% Similarity=0.375 Sum_probs=34.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC
Q 009785 58 PFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (526)
Q Consensus 58 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~ 94 (526)
+.++||+|||||++|+++|+.|++.|.+|+|+|+++.
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~ 77 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPF 77 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 3468999999999999999999999999999999853
No 222
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.76 E-value=0.00018 Score=75.25 Aligned_cols=100 Identities=14% Similarity=0.167 Sum_probs=72.8
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCee
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 140 (526)
-+|+|||||+.|+-+|..|++.|.+|+++|+.+..-..
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 214 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRK------------------------------------------ 214 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCTT------------------------------------------
T ss_pred CeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCcc------------------------------------------
Confidence 47999999999999999999999999999997531000
Q ss_pred eeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEee
Q 009785 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCD 219 (526)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~AD 219 (526)
....+.+.+.+.+++. +++++.++ ++++..++++. +.+...+|++ ++.+|.||.|.
T Consensus 215 -------------------~d~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~~~~~--~~v~~~~g~~-~~~~D~vi~a~ 271 (500)
T 1onf_A 215 -------------------FDESVINVLENDMKKN-NINIVTFADVVEIKKVSDKN--LSIHLSDGRI-YEHFDHVIYCV 271 (500)
T ss_dssp -------------------SCHHHHHHHHHHHHHT-TCEEECSCCEEEEEESSTTC--EEEEETTSCE-EEEESEEEECC
T ss_pred -------------------cchhhHHHHHHHHHhC-CCEEEECCEEEEEEEcCCce--EEEEECCCcE-EEECCEEEECC
Confidence 0012344556666666 89999885 99998654321 3344567764 47899999999
Q ss_pred cCCccc
Q 009785 220 GCFSNL 225 (526)
Q Consensus 220 G~~S~v 225 (526)
|.....
T Consensus 272 G~~p~~ 277 (500)
T 1onf_A 272 GRSPDT 277 (500)
T ss_dssp CBCCTT
T ss_pred CCCcCC
Confidence 987654
No 223
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.76 E-value=0.00019 Score=74.60 Aligned_cols=104 Identities=17% Similarity=0.192 Sum_probs=72.5
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCee
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 140 (526)
-+|+|||||+.|+-+|..|++.|.+|+|+|+.+....+.
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~----------------------------------------- 217 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVG----------------------------------------- 217 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCSS-----------------------------------------
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCcc-----------------------------------------
Confidence 479999999999999999999999999999985321100
Q ss_pred eeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEEcCeEEEe
Q 009785 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKT-KAGEELTAYAPLTIVC 218 (526)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~-~~G~~~~i~a~~vV~A 218 (526)
....+.+.+.+.+++. +++++.++ |+++..+++....+++.. .+++..++.+|.||.|
T Consensus 218 -------------------~~~~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a 277 (474)
T 1zmd_A 218 -------------------IDMEISKNFQRILQKQ-GFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVC 277 (474)
T ss_dssp -------------------CCHHHHHHHHHHHHHT-TCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEEC
T ss_pred -------------------cCHHHHHHHHHHHHHC-CCEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEEC
Confidence 0112445566666666 79999885 999987665412344432 1222235789999999
Q ss_pred ecCCccc
Q 009785 219 DGCFSNL 225 (526)
Q Consensus 219 DG~~S~v 225 (526)
.|.....
T Consensus 278 ~G~~p~~ 284 (474)
T 1zmd_A 278 IGRRPFT 284 (474)
T ss_dssp SCEEECC
T ss_pred cCCCcCC
Confidence 9977543
No 224
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.75 E-value=0.00016 Score=74.08 Aligned_cols=99 Identities=20% Similarity=0.271 Sum_probs=71.4
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCee
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 140 (526)
-+|+|||||..|+-+|..|++.|.+|+++|+.+....+.
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~----------------------------------------- 188 (431)
T 1q1r_A 150 NRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERV----------------------------------------- 188 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTT-----------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccch-----------------------------------------
Confidence 479999999999999999999999999999975311000
Q ss_pred eeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEe--eCCeEEEEEEEeCCCcEEEEEcCeEEE
Q 009785 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLE--EKGTIKGVQYKTKAGEELTAYAPLTIV 217 (526)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~--~~~~v~gv~v~~~~G~~~~i~a~~vV~ 217 (526)
....+.+.+.+.+++. +++++.++ ++++.. +++++.+|+ ..+|+ ++.+|.||.
T Consensus 189 -------------------~~~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~~~v~~v~--~~~G~--~i~~D~Vv~ 244 (431)
T 1q1r_A 189 -------------------TAPPVSAFYEHLHREA-GVDIRTGTQVCGFEMSTDQQKVTAVL--CEDGT--RLPADLVIA 244 (431)
T ss_dssp -------------------SCHHHHHHHHHHHHHH-TCEEECSCCEEEEEECTTTCCEEEEE--ETTSC--EEECSEEEE
T ss_pred -------------------hhHHHHHHHHHHHHhC-CeEEEeCCEEEEEEeccCCCcEEEEE--eCCCC--EEEcCEEEE
Confidence 0012344455555555 79999884 999886 455554444 46675 467999999
Q ss_pred eecCCcc
Q 009785 218 CDGCFSN 224 (526)
Q Consensus 218 ADG~~S~ 224 (526)
|.|....
T Consensus 245 a~G~~p~ 251 (431)
T 1q1r_A 245 GIGLIPN 251 (431)
T ss_dssp CCCEEEC
T ss_pred CCCCCcC
Confidence 9997654
No 225
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.75 E-value=1.6e-05 Score=83.23 Aligned_cols=34 Identities=29% Similarity=0.471 Sum_probs=32.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
+|||+||||||+|+++|..|++.|.+|+|+||++
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~ 41 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA 41 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 4899999999999999999999999999999974
No 226
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.70 E-value=2.5e-05 Score=81.81 Aligned_cols=34 Identities=32% Similarity=0.526 Sum_probs=32.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
++||+|||||++|+++|..|++.|.+|+|+|++.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4899999999999999999999999999999984
No 227
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.70 E-value=0.00023 Score=73.49 Aligned_cols=99 Identities=21% Similarity=0.328 Sum_probs=72.3
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCee
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 140 (526)
-+|+|||||..|+-+|..|++.|.+|+++|+.+....+.
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~----------------------------------------- 188 (452)
T 2cdu_A 150 KTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYKY----------------------------------------- 188 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTTT-----------------------------------------
T ss_pred CeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhhh-----------------------------------------
Confidence 479999999999999999999999999999985311100
Q ss_pred eeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEee
Q 009785 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCD 219 (526)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~AD 219 (526)
....+.+.+.+.+++. +++++.++ |+++..+++++..+. . +|+ ++.+|.||.|.
T Consensus 189 -------------------~~~~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~~~~v~~v~--~-~g~--~i~~D~vv~a~ 243 (452)
T 2cdu_A 189 -------------------FDKEFTDILAKDYEAH-GVNLVLGSKVAAFEEVDDEIITKT--L-DGK--EIKSDIAILCI 243 (452)
T ss_dssp -------------------SCHHHHHHHHHHHHHT-TCEEEESSCEEEEEEETTEEEEEE--T-TSC--EEEESEEEECC
T ss_pred -------------------hhhhHHHHHHHHHHHC-CCEEEcCCeeEEEEcCCCeEEEEE--e-CCC--EEECCEEEECc
Confidence 0012445566666666 79999885 999987666554333 3 565 46799999999
Q ss_pred cCCccc
Q 009785 220 GCFSNL 225 (526)
Q Consensus 220 G~~S~v 225 (526)
|.....
T Consensus 244 G~~p~~ 249 (452)
T 2cdu_A 244 GFRPNT 249 (452)
T ss_dssp CEEECC
T ss_pred CCCCCH
Confidence 987654
No 228
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.69 E-value=3.2e-05 Score=80.65 Aligned_cols=37 Identities=24% Similarity=0.426 Sum_probs=33.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCC-CeEEEEecCCCCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDG-RRVHVIERDLSEP 96 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G-~~V~l~Er~~~~~ 96 (526)
.+||+|||||++||++|+.|+++| .+|+|+|+++...
T Consensus 9 ~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~G 46 (484)
T 4dsg_A 9 TPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPG 46 (484)
T ss_dssp SCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence 589999999999999999999999 7999999987553
No 229
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.69 E-value=0.00019 Score=75.10 Aligned_cols=98 Identities=23% Similarity=0.268 Sum_probs=73.5
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCee
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 140 (526)
-.|+|||||..|+-+|..|++.|.+|+++|+.+.....
T Consensus 183 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 220 (499)
T 1xdi_A 183 DHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPY------------------------------------------ 220 (499)
T ss_dssp SSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCC------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc------------------------------------------
Confidence 47999999999999999999999999999998531100
Q ss_pred eeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEee
Q 009785 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCD 219 (526)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~AD 219 (526)
....+.+.+.+.+++. +++++.++ |+++..++++ +.+...+|+ ++.+|.||.|.
T Consensus 221 -------------------~d~~~~~~l~~~l~~~-GV~i~~~~~V~~i~~~~~~---v~v~~~~g~--~i~aD~Vv~a~ 275 (499)
T 1xdi_A 221 -------------------EDADAALVLEESFAER-GVRLFKNARAASVTRTGAG---VLVTMTDGR--TVEGSHALMTI 275 (499)
T ss_dssp -------------------SSHHHHHHHHHHHHHT-TCEEETTCCEEEEEECSSS---EEEEETTSC--EEEESEEEECC
T ss_pred -------------------cCHHHHHHHHHHHHHC-CCEEEeCCEEEEEEEeCCE---EEEEECCCc--EEEcCEEEECC
Confidence 0012455566666666 89999885 9999876654 345566775 46799999999
Q ss_pred cCCccc
Q 009785 220 GCFSNL 225 (526)
Q Consensus 220 G~~S~v 225 (526)
|..+..
T Consensus 276 G~~p~~ 281 (499)
T 1xdi_A 276 GSVPNT 281 (499)
T ss_dssp CEEECC
T ss_pred CCCcCC
Confidence 987654
No 230
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.67 E-value=3.1e-05 Score=80.00 Aligned_cols=35 Identities=43% Similarity=0.496 Sum_probs=32.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~ 94 (526)
.+||+||||||+|+++|..|++.|++|+|+|+.+.
T Consensus 122 ~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~ 156 (456)
T 2vdc_G 122 GLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDR 156 (456)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCC
Confidence 57999999999999999999999999999999854
No 231
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.67 E-value=0.00023 Score=74.30 Aligned_cols=98 Identities=12% Similarity=0.162 Sum_probs=72.1
Q ss_pred CcEEEECCCHHHHHHHHHHHhC---CCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEEC
Q 009785 61 ADVIVVGAGVAGAALANTLAKD---GRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKD 137 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~---G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 137 (526)
-+|+|||||..|+-+|..|++. |.+|+++|+.+..... +
T Consensus 188 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~------------------~-------------------- 229 (490)
T 1fec_A 188 KRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRG------------------F-------------------- 229 (490)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTT------------------S--------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcccc------------------c--------------------
Confidence 4799999999999999999999 9999999998531000 0
Q ss_pred CeeeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEE
Q 009785 138 GNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTI 216 (526)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV 216 (526)
...+.+.+.+.+++. +++++.++ |+++..++++. +.+...+|+ ++.+|.||
T Consensus 230 -----------------------d~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~~--~~v~~~~G~--~i~~D~vv 281 (490)
T 1fec_A 230 -----------------------DSELRKQLTEQLRAN-GINVRTHENPAKVTKNADGT--RHVVFESGA--EADYDVVM 281 (490)
T ss_dssp -----------------------CHHHHHHHHHHHHHT-TEEEEETCCEEEEEECTTSC--EEEEETTSC--EEEESEEE
T ss_pred -----------------------CHHHHHHHHHHHHhC-CCEEEeCCEEEEEEEcCCCE--EEEEECCCc--EEEcCEEE
Confidence 012445666666666 89999885 99998765432 334456776 47799999
Q ss_pred EeecCCcc
Q 009785 217 VCDGCFSN 224 (526)
Q Consensus 217 ~ADG~~S~ 224 (526)
.|.|....
T Consensus 282 ~a~G~~p~ 289 (490)
T 1fec_A 282 LAIGRVPR 289 (490)
T ss_dssp ECSCEEES
T ss_pred EccCCCcC
Confidence 99997654
No 232
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.66 E-value=0.00013 Score=74.31 Aligned_cols=100 Identities=24% Similarity=0.298 Sum_probs=71.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCe
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 139 (526)
.-+|+|||||..|+-+|..|++.|.+|+++|+.+.... +.
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~---------~~------------------------------- 182 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLV---------RV------------------------------- 182 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSH---------HH-------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccch---------hh-------------------------------
Confidence 35799999999999999999999999999999853110 00
Q ss_pred eeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEe
Q 009785 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVC 218 (526)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~A 218 (526)
....+.+.+.+.+++. +++++.++ |+++..++ .+.+ +...+|+ ++.+|.||.|
T Consensus 183 --------------------~~~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~-~~~~--v~~~dg~--~i~aD~Vv~a 236 (410)
T 3ef6_A 183 --------------------LGRRIGAWLRGLLTEL-GVQVELGTGVVGFSGEG-QLEQ--VMASDGR--SFVADSALIC 236 (410)
T ss_dssp --------------------HCHHHHHHHHHHHHHH-TCEEECSCCEEEEECSS-SCCE--EEETTSC--EEECSEEEEC
T ss_pred --------------------cCHHHHHHHHHHHHHC-CCEEEeCCEEEEEeccC-cEEE--EEECCCC--EEEcCEEEEe
Confidence 0012445555555555 89999885 88887654 3333 4456776 4679999999
Q ss_pred ecCCccc
Q 009785 219 DGCFSNL 225 (526)
Q Consensus 219 DG~~S~v 225 (526)
.|.....
T Consensus 237 ~G~~p~~ 243 (410)
T 3ef6_A 237 VGAEPAD 243 (410)
T ss_dssp SCEEECC
T ss_pred eCCeecH
Confidence 9987653
No 233
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.66 E-value=0.00048 Score=71.04 Aligned_cols=98 Identities=20% Similarity=0.191 Sum_probs=72.6
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCee
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 140 (526)
-+|+|||||..|+-+|..|++.|.+|+++|+.+....+.
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~----------------------------------------- 186 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPKY----------------------------------------- 186 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT-----------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCcccccc-----------------------------------------
Confidence 479999999999999999999999999999985310000
Q ss_pred eeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEee
Q 009785 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCD 219 (526)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~AD 219 (526)
....+.+.+.+.+++. +++++.++ |+++..+++++ .+..++| ++.+|.||.|.
T Consensus 187 -------------------~d~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~v---~v~~~~g---~i~aD~Vv~A~ 240 (452)
T 3oc4_A 187 -------------------FDKEMVAEVQKSLEKQ-AVIFHFEETVLGIEETANGI---VLETSEQ---EISCDSGIFAL 240 (452)
T ss_dssp -------------------CCHHHHHHHHHHHHTT-TEEEEETCCEEEEEECSSCE---EEEESSC---EEEESEEEECS
T ss_pred -------------------CCHHHHHHHHHHHHHc-CCEEEeCCEEEEEEccCCeE---EEEECCC---EEEeCEEEECc
Confidence 0113556666677766 89999885 99998666654 3344555 47799999999
Q ss_pred cCCccc
Q 009785 220 GCFSNL 225 (526)
Q Consensus 220 G~~S~v 225 (526)
|.....
T Consensus 241 G~~p~~ 246 (452)
T 3oc4_A 241 NLHPQL 246 (452)
T ss_dssp CCBCCC
T ss_pred CCCCCh
Confidence 986543
No 234
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.65 E-value=0.00017 Score=75.18 Aligned_cols=100 Identities=14% Similarity=0.198 Sum_probs=71.5
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCee
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 140 (526)
-+|+|||||..|+-+|..|++.|.+|+|+|+.+..-..
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~~------------------------------------------ 223 (482)
T 1ojt_A 186 GKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQG------------------------------------------ 223 (482)
T ss_dssp SEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc------------------------------------------
Confidence 47999999999999999999999999999998531100
Q ss_pred eeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEec-eEEEEEeeCCeEEEEEEEe-CC-CcEEEEEcCeEEE
Q 009785 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKT-KA-GEELTAYAPLTIV 217 (526)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~-~v~~l~~~~~~v~gv~v~~-~~-G~~~~i~a~~vV~ 217 (526)
....+.+.+.+.+++. +++++.+ +|+++..+++.+ .|++.+ .+ |+ ++.+|.||.
T Consensus 224 -------------------~~~~~~~~l~~~l~~~-gV~i~~~~~v~~i~~~~~~~-~v~~~~~~~~g~--~~~~D~vv~ 280 (482)
T 1ojt_A 224 -------------------ADRDLVKVWQKQNEYR-FDNIMVNTKTVAVEPKEDGV-YVTFEGANAPKE--PQRYDAVLV 280 (482)
T ss_dssp -------------------SCHHHHHHHHHHHGGG-EEEEECSCEEEEEEEETTEE-EEEEESSSCCSS--CEEESCEEE
T ss_pred -------------------cCHHHHHHHHHHHHhc-CCEEEECCEEEEEEEcCCeE-EEEEeccCCCce--EEEcCEEEE
Confidence 0012445566666665 7999988 499988766543 344443 11 54 356999999
Q ss_pred eecCCccc
Q 009785 218 CDGCFSNL 225 (526)
Q Consensus 218 ADG~~S~v 225 (526)
|.|.....
T Consensus 281 a~G~~p~~ 288 (482)
T 1ojt_A 281 AAGRAPNG 288 (482)
T ss_dssp CCCEEECG
T ss_pred CcCCCcCC
Confidence 99987654
No 235
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.64 E-value=0.00035 Score=71.04 Aligned_cols=95 Identities=25% Similarity=0.322 Sum_probs=69.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCe
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 139 (526)
.-+|+|||||..|+-+|..|++.|.+|+++|+.+....+.
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~---------------------------------------- 184 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRA---------------------------------------- 184 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccccc----------------------------------------
Confidence 3579999999999999999999999999999985311000
Q ss_pred eeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEe
Q 009785 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVC 218 (526)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~A 218 (526)
....+.+.+.+.+++. +++++.++ ++++. ++ .|+ ..+|+ ++.+|.||.|
T Consensus 185 --------------------~~~~~~~~l~~~l~~~-GV~i~~~~~v~~i~--~~---~v~--~~~g~--~i~~D~vi~a 234 (408)
T 2gqw_A 185 --------------------APATLADFVARYHAAQ-GVDLRFERSVTGSV--DG---VVL--LDDGT--RIAADMVVVG 234 (408)
T ss_dssp --------------------SCHHHHHHHHHHHHHT-TCEEEESCCEEEEE--TT---EEE--ETTSC--EEECSEEEEC
T ss_pred --------------------cCHHHHHHHHHHHHHc-CcEEEeCCEEEEEE--CC---EEE--ECCCC--EEEcCEEEEC
Confidence 0012445556666666 79999884 98887 33 233 45675 4679999999
Q ss_pred ecCCcc
Q 009785 219 DGCFSN 224 (526)
Q Consensus 219 DG~~S~ 224 (526)
.|....
T Consensus 235 ~G~~p~ 240 (408)
T 2gqw_A 235 IGVLAN 240 (408)
T ss_dssp SCEEEC
T ss_pred cCCCcc
Confidence 997754
No 236
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.63 E-value=0.00018 Score=75.58 Aligned_cols=95 Identities=24% Similarity=0.275 Sum_probs=72.8
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCee
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 140 (526)
-+|+|||||..|+-+|..|++.|.+|+++++.+... .
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~---------~---------------------------------- 392 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK---------A---------------------------------- 392 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCC---------S----------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccC---------c----------------------------------
Confidence 479999999999999999999999999999874210 0
Q ss_pred eeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEEcCeEEEe
Q 009785 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKT-KAGEELTAYAPLTIVC 218 (526)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~-~~G~~~~i~a~~vV~A 218 (526)
...+.+.+.+.++++++.++ ++++..+++++.++++.+ .+|++.++.+|.||.|
T Consensus 393 ------------------------~~~l~~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a 448 (521)
T 1hyu_A 393 ------------------------DQVLQDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQ 448 (521)
T ss_dssp ------------------------CHHHHHHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEEEECSEEEEC
T ss_pred ------------------------CHHHHHHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEcCEEEEC
Confidence 01233344444589999885 888887767777788876 4677677899999999
Q ss_pred ecCC
Q 009785 219 DGCF 222 (526)
Q Consensus 219 DG~~ 222 (526)
.|..
T Consensus 449 ~G~~ 452 (521)
T 1hyu_A 449 IGLL 452 (521)
T ss_dssp CCEE
T ss_pred cCCC
Confidence 9953
No 237
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.63 E-value=0.00034 Score=72.95 Aligned_cols=98 Identities=19% Similarity=0.265 Sum_probs=70.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCe
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 139 (526)
.-+|+|||||..|+-+|..|++.|.+|+|+|+.+....+.
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~---------------------------------------- 233 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGY---------------------------------------- 233 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT----------------------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhhH----------------------------------------
Confidence 3479999999999999999999999999999985311100
Q ss_pred eeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEe
Q 009785 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVC 218 (526)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~A 218 (526)
....+.+.+.+.+++. +++++.++ ++++.. ++++..+.. +|+ ++.+|.||.|
T Consensus 234 --------------------~~~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~-~~~v~~v~~---~g~--~i~~D~Vi~a 286 (490)
T 2bc0_A 234 --------------------YDRDLTDLMAKNMEEH-GIQLAFGETVKEVAG-NGKVEKIIT---DKN--EYDVDMVILA 286 (490)
T ss_dssp --------------------SCHHHHHHHHHHHHTT-TCEEEETCCEEEEEC-SSSCCEEEE---SSC--EEECSEEEEC
T ss_pred --------------------HHHHHHHHHHHHHHhC-CeEEEeCCEEEEEEc-CCcEEEEEE---CCc--EEECCEEEEC
Confidence 0013455666667766 89999885 998876 343433432 454 4779999999
Q ss_pred ecCCcc
Q 009785 219 DGCFSN 224 (526)
Q Consensus 219 DG~~S~ 224 (526)
.|....
T Consensus 287 ~G~~p~ 292 (490)
T 2bc0_A 287 VGFRPN 292 (490)
T ss_dssp CCEEEC
T ss_pred CCCCcC
Confidence 997654
No 238
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.61 E-value=0.00028 Score=73.66 Aligned_cols=99 Identities=11% Similarity=0.159 Sum_probs=71.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhC---CCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEEC
Q 009785 61 ADVIVVGAGVAGAALANTLAKD---GRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKD 137 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~---G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 137 (526)
-.|+|||||..|+-+|..|++. |.+|+|+|+.+..-.. +
T Consensus 192 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~------------------~-------------------- 233 (495)
T 2wpf_A 192 RRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRG------------------F-------------------- 233 (495)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTT------------------S--------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccccc------------------c--------------------
Confidence 4799999999999999999999 9999999988531100 0
Q ss_pred CeeeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEE
Q 009785 138 GNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTI 216 (526)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV 216 (526)
...+.+.+.+.+++. +++++.++ |+++..++++. +.+...+|+ ++.+|.||
T Consensus 234 -----------------------d~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~~--~~v~~~~G~--~i~~D~vv 285 (495)
T 2wpf_A 234 -----------------------DETIREEVTKQLTAN-GIEIMTNENPAKVSLNTDGS--KHVTFESGK--TLDVDVVM 285 (495)
T ss_dssp -----------------------CHHHHHHHHHHHHHT-TCEEEESCCEEEEEECTTSC--EEEEETTSC--EEEESEEE
T ss_pred -----------------------CHHHHHHHHHHHHhC-CCEEEeCCEEEEEEEcCCce--EEEEECCCc--EEEcCEEE
Confidence 012345556666666 79999884 99998765432 334456776 47799999
Q ss_pred EeecCCccc
Q 009785 217 VCDGCFSNL 225 (526)
Q Consensus 217 ~ADG~~S~v 225 (526)
.|.|.....
T Consensus 286 ~a~G~~p~~ 294 (495)
T 2wpf_A 286 MAIGRIPRT 294 (495)
T ss_dssp ECSCEEECC
T ss_pred ECCCCcccc
Confidence 999976543
No 239
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.61 E-value=0.00057 Score=71.18 Aligned_cols=101 Identities=17% Similarity=0.190 Sum_probs=71.8
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCee
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 140 (526)
-+|+|||||..|+-+|..|++.|.+|+++++.... . ..
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l---------~-----------------~~---------------- 223 (488)
T 3dgz_A 186 GKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPL---------R-----------------GF---------------- 223 (488)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSS---------T-----------------TS----------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEcCccc---------c-----------------cC----------------
Confidence 46999999999999999999999999999986210 0 00
Q ss_pred eeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeC-CCcEEEEEcCeEEEe
Q 009785 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTK-AGEELTAYAPLTIVC 218 (526)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~-~G~~~~i~a~~vV~A 218 (526)
...+.+.+.+.+++. +++++.++ +.++...++....+++.+. +|+..++.+|.||.|
T Consensus 224 --------------------d~~~~~~l~~~l~~~-gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a 282 (488)
T 3dgz_A 224 --------------------DQQMSSLVTEHMESH-GTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWA 282 (488)
T ss_dssp --------------------CHHHHHHHHHHHHHT-TCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEEC
T ss_pred --------------------CHHHHHHHHHHHHHC-CCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEc
Confidence 012445556666665 79999885 8888764433233555553 366566889999999
Q ss_pred ecCCcc
Q 009785 219 DGCFSN 224 (526)
Q Consensus 219 DG~~S~ 224 (526)
.|....
T Consensus 283 ~G~~p~ 288 (488)
T 3dgz_A 283 IGRVPE 288 (488)
T ss_dssp SCEEES
T ss_pred ccCCcc
Confidence 996543
No 240
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.60 E-value=0.00053 Score=71.37 Aligned_cols=101 Identities=20% Similarity=0.186 Sum_probs=72.0
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCee
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 140 (526)
-+|+|||||..|+-+|..|++.|.+|+++++.... . ..
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l---------~-----------------~~---------------- 225 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVL---------R-----------------GF---------------- 225 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSS---------T-----------------TS----------------
T ss_pred CcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCC---------c-----------------cc----------------
Confidence 46999999999999999999999999999985210 0 00
Q ss_pred eeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeC-CCcEEEEEcCeEEEe
Q 009785 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTK-AGEELTAYAPLTIVC 218 (526)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~-~G~~~~i~a~~vV~A 218 (526)
...+.+.+.+.+++. +++++.++ ++++..++++...|++.+. +|+..++.+|.||.|
T Consensus 226 --------------------d~~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a 284 (483)
T 3dgh_A 226 --------------------DQQMAELVAASMEER-GIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWA 284 (483)
T ss_dssp --------------------CHHHHHHHHHHHHHT-TCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEEC
T ss_pred --------------------CHHHHHHHHHHHHhC-CCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEEC
Confidence 012445556666666 79998885 8888875443223665553 355567889999999
Q ss_pred ecCCcc
Q 009785 219 DGCFSN 224 (526)
Q Consensus 219 DG~~S~ 224 (526)
.|....
T Consensus 285 ~G~~p~ 290 (483)
T 3dgh_A 285 IGRKGL 290 (483)
T ss_dssp SCEEEC
T ss_pred cccccC
Confidence 997543
No 241
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.59 E-value=5.3e-05 Score=82.59 Aligned_cols=37 Identities=38% Similarity=0.449 Sum_probs=33.9
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC
Q 009785 58 PFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (526)
Q Consensus 58 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~ 94 (526)
..++||+|||||++|+++|+.|+++|++|+|+|+++.
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~ 425 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRD 425 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred cccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 3468999999999999999999999999999999853
No 242
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.59 E-value=0.00064 Score=66.12 Aligned_cols=96 Identities=21% Similarity=0.188 Sum_probs=70.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCe
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 139 (526)
.-+|+|||+|+.|+-+|..|++.|.+|+++++.+....
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~------------------------------------------ 191 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA------------------------------------------ 191 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS------------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc------------------------------------------
Confidence 35799999999999999999999999999998842110
Q ss_pred eeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEEcCeEEE
Q 009785 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKT-KAGEELTAYAPLTIV 217 (526)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~-~~G~~~~i~a~~vV~ 217 (526)
. ..+.+.+.+..+++++.++ ++++..+ +++.+|++.+ .+|+..++.+|.||.
T Consensus 192 ---------------------~----~~~~~~~~~~~gv~~~~~~~v~~i~~~-~~~~~v~~~~~~~g~~~~~~~D~vv~ 245 (323)
T 3f8d_A 192 ---------------------Q----PIYVETVKKKPNVEFVLNSVVKEIKGD-KVVKQVVVENLKTGEIKELNVNGVFI 245 (323)
T ss_dssp ---------------------C----HHHHHHHHTCTTEEEECSEEEEEEEES-SSEEEEEEEETTTCCEEEEECSEEEE
T ss_pred ---------------------C----HHHHHHHHhCCCcEEEeCCEEEEEecc-CceeEEEEEECCCCceEEEEcCEEEE
Confidence 0 0112233334489999886 8888766 4555677765 457766788999999
Q ss_pred eecCCc
Q 009785 218 CDGCFS 223 (526)
Q Consensus 218 ADG~~S 223 (526)
|.|...
T Consensus 246 a~G~~p 251 (323)
T 3f8d_A 246 EIGFDP 251 (323)
T ss_dssp CCCEEC
T ss_pred EECCCC
Confidence 999644
No 243
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.59 E-value=4.7e-05 Score=76.84 Aligned_cols=35 Identities=29% Similarity=0.379 Sum_probs=31.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCC--CeEEEEecCC
Q 009785 59 FDADVIVVGAGVAGAALANTLAKDG--RRVHVIERDL 93 (526)
Q Consensus 59 ~~~dVvIVGaG~aGl~~A~~La~~G--~~V~l~Er~~ 93 (526)
.++||+|||||++|+++|..|++.| .+|+|+|++.
T Consensus 3 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 3 ERAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD 39 (384)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC
T ss_pred CCCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 3589999999999999999999999 5699999874
No 244
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.58 E-value=0.00044 Score=73.44 Aligned_cols=98 Identities=19% Similarity=0.236 Sum_probs=70.8
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCee
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 140 (526)
-+|+|||||..|+-+|..|++.|.+|+++|+.+.....
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 189 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMTP------------------------------------------ 189 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCTT------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccchh------------------------------------------
Confidence 37999999999999999999999999999997521100
Q ss_pred eeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEee-------------------CCeEEEEEE
Q 009785 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEE-------------------KGTIKGVQY 200 (526)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~-------------------~~~v~gv~v 200 (526)
....+.+.+.+.+++. +++++.++ ++++..+ ++. +.+
T Consensus 190 -------------------~~~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~---~~v 246 (565)
T 3ntd_A 190 -------------------VDREMAGFAHQAIRDQ-GVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGH---LSL 246 (565)
T ss_dssp -------------------SCHHHHHHHHHHHHHT-TCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCE---EEE
T ss_pred -------------------cCHHHHHHHHHHHHHC-CCEEEeCCeEEEEeccccccccccccccccccccCCCc---EEE
Confidence 0012344555556655 78998874 8888763 443 344
Q ss_pred EeCCCcEEEEEcCeEEEeecCCccc
Q 009785 201 KTKAGEELTAYAPLTIVCDGCFSNL 225 (526)
Q Consensus 201 ~~~~G~~~~i~a~~vV~ADG~~S~v 225 (526)
...+|+ ++.+|.||.|.|.....
T Consensus 247 ~~~~g~--~i~~D~vi~a~G~~p~~ 269 (565)
T 3ntd_A 247 TLSNGE--LLETDLLIMAIGVRPET 269 (565)
T ss_dssp EETTSC--EEEESEEEECSCEEECC
T ss_pred EEcCCC--EEEcCEEEECcCCccch
Confidence 456776 47799999999987653
No 245
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.58 E-value=3.7e-05 Score=79.71 Aligned_cols=34 Identities=32% Similarity=0.392 Sum_probs=32.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
++||+||||||+|+++|..|++.|.+|+|+|+++
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~ 39 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 5899999999999999999999999999999985
No 246
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.57 E-value=0.00031 Score=73.03 Aligned_cols=97 Identities=24% Similarity=0.361 Sum_probs=69.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCe
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 139 (526)
.-+|+|||||+.|+-+|..|++.|.+|+++|+.+.... .
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-------------------------~---------------- 224 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGT-------------------------I---------------- 224 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTS-------------------------S----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhh-------------------------c----------------
Confidence 45899999999999999999999999999998742100 0
Q ss_pred eeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEe
Q 009785 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVC 218 (526)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~A 218 (526)
....+.+.+.+.+++. +++++.++ |+++..+ +++..+. .+ +. ++.+|.||.|
T Consensus 225 --------------------~~~~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~-~~v~~v~--~~-~~--~i~~D~vi~a 277 (480)
T 3cgb_A 225 --------------------YDGDMAEYIYKEADKH-HIEILTNENVKAFKGN-ERVEAVE--TD-KG--TYKADLVLVS 277 (480)
T ss_dssp --------------------SCHHHHHHHHHHHHHT-TCEEECSCCEEEEEES-SBEEEEE--ET-TE--EEECSEEEEC
T ss_pred --------------------CCHHHHHHHHHHHHHc-CcEEEcCCEEEEEEcC-CcEEEEE--EC-CC--EEEcCEEEEC
Confidence 0013455666666666 79999884 8888765 4443333 33 32 4789999999
Q ss_pred ecCCcc
Q 009785 219 DGCFSN 224 (526)
Q Consensus 219 DG~~S~ 224 (526)
.|....
T Consensus 278 ~G~~p~ 283 (480)
T 3cgb_A 278 VGVKPN 283 (480)
T ss_dssp SCEEES
T ss_pred cCCCcC
Confidence 997654
No 247
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.55 E-value=0.00034 Score=72.56 Aligned_cols=98 Identities=26% Similarity=0.306 Sum_probs=73.0
Q ss_pred CcEEEECCCHHHHHHHHHHHhC-CCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCe
Q 009785 61 ADVIVVGAGVAGAALANTLAKD-GRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~-G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 139 (526)
-+|+|||||..|+-+|..|++. |.+|+++|+.+....+.
T Consensus 160 ~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~---------------------------------------- 199 (472)
T 3iwa_A 160 SKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGF---------------------------------------- 199 (472)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTT----------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccccc----------------------------------------
Confidence 4799999999999999999999 99999999974211000
Q ss_pred eeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEec-eEEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEe
Q 009785 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVC 218 (526)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~-~v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~A 218 (526)
....+.+.|.+.+++. +++++.+ +|+++..+++.+. +...+|+ ++.+|.||.|
T Consensus 200 --------------------~~~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~v~---v~~~~g~--~i~aD~Vv~a 253 (472)
T 3iwa_A 200 --------------------TSKSLSQMLRHDLEKN-DVVVHTGEKVVRLEGENGKVA---RVITDKR--TLDADLVILA 253 (472)
T ss_dssp --------------------SCHHHHHHHHHHHHHT-TCEEECSCCEEEEEESSSBEE---EEEESSC--EEECSEEEEC
T ss_pred --------------------cCHHHHHHHHHHHHhc-CCEEEeCCEEEEEEccCCeEE---EEEeCCC--EEEcCEEEEC
Confidence 0113556666666666 8999988 4999987666543 3445675 4779999999
Q ss_pred ecCCcc
Q 009785 219 DGCFSN 224 (526)
Q Consensus 219 DG~~S~ 224 (526)
.|....
T Consensus 254 ~G~~p~ 259 (472)
T 3iwa_A 254 AGVSPN 259 (472)
T ss_dssp SCEEEC
T ss_pred CCCCcC
Confidence 998754
No 248
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.54 E-value=0.0007 Score=70.29 Aligned_cols=102 Identities=13% Similarity=0.097 Sum_probs=70.6
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCee
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 140 (526)
-.|+|||||..|+-+|..|++.|.+|+++++.+..-..
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 225 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRS------------------------------------------ 225 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT------------------------------------------
T ss_pred ccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccccc------------------------------------------
Confidence 47999999999999999999999999999987431000
Q ss_pred eeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCe-EEEEEEEeC-CCcE--EEEEcCeE
Q 009785 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGT-IKGVQYKTK-AGEE--LTAYAPLT 215 (526)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~-v~gv~v~~~-~G~~--~~i~a~~v 215 (526)
....+.+.+.+.+++. +++++.++ ++++..++++ ...+++.+. +|+. .++.+|.|
T Consensus 226 -------------------~d~~~~~~~~~~l~~~-gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~v 285 (478)
T 3dk9_A 226 -------------------FDSMISTNCTEELENA-GVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCL 285 (478)
T ss_dssp -------------------SCHHHHHHHHHHHHHT-TCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEE
T ss_pred -------------------cCHHHHHHHHHHHHHC-CCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEE
Confidence 0012345555666665 89999885 8888865443 222433322 1332 46889999
Q ss_pred EEeecCCcc
Q 009785 216 IVCDGCFSN 224 (526)
Q Consensus 216 V~ADG~~S~ 224 (526)
|.|.|....
T Consensus 286 i~a~G~~p~ 294 (478)
T 3dk9_A 286 LWAIGRVPN 294 (478)
T ss_dssp EECSCEEES
T ss_pred EEeeccccC
Confidence 999996543
No 249
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.53 E-value=6.1e-05 Score=79.81 Aligned_cols=59 Identities=22% Similarity=0.352 Sum_probs=44.3
Q ss_pred HHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeC-CCcE--EEE-EcCeEEEeecCCc
Q 009785 165 VQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTK-AGEE--LTA-YAPLTIVCDGCFS 223 (526)
Q Consensus 165 ~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~-~G~~--~~i-~a~~vV~ADG~~S 223 (526)
...+.+.+.+.++++++.++ |+++..+++++.||++.+. +|+. .++ .++-||.|.|+..
T Consensus 198 ~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~ 261 (546)
T 1kdg_A 198 VATYLQTALARPNFTFKTNVMVSNVVRNGSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFG 261 (546)
T ss_dssp HHTHHHHHHTCTTEEEECSCCEEEEEEETTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHH
T ss_pred HHHHHHHHhhCCCcEEEeCCEEEEEEEeCCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhc
Confidence 34456666666799999885 9999988888999988653 4652 223 6899999999864
No 250
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.53 E-value=6.3e-05 Score=78.15 Aligned_cols=38 Identities=32% Similarity=0.454 Sum_probs=33.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCC-eEEEEecCCCCCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGR-RVHVIERDLSEPD 97 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~-~V~l~Er~~~~~~ 97 (526)
++||+|||||++|+++|+.|++.|+ +|+|+|+++....
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg 42 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGG 42 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBT
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCC
Confidence 5799999999999999999999999 8999999865443
No 251
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.53 E-value=0.00047 Score=71.41 Aligned_cols=96 Identities=18% Similarity=0.196 Sum_probs=70.9
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCee
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 140 (526)
-+|+|||||+.|+-+|..|++.|.+|+++|+.+..-. +
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------~------------------------------------ 214 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR------E------------------------------------ 214 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT------S------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC------C------------------------------------
Confidence 4799999999999999999999999999999852100 0
Q ss_pred eeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEee
Q 009785 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCD 219 (526)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~AD 219 (526)
...+.+.+.+.+++. +++++.++ |+++..+++.+ .+..+ +. ++.+|.||.|.
T Consensus 215 --------------------~~~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~~~~~---~v~~~-~~--~i~aD~Vv~a~ 267 (467)
T 1zk7_A 215 --------------------DPAIGEAVTAAFRAE-GIEVLEHTQASQVAHMDGEF---VLTTT-HG--ELRADKLLVAT 267 (467)
T ss_dssp --------------------CHHHHHHHHHHHHHT-TCEEETTCCEEEEEEETTEE---EEEET-TE--EEEESEEEECS
T ss_pred --------------------CHHHHHHHHHHHHhC-CCEEEcCCEEEEEEEeCCEE---EEEEC-Cc--EEEcCEEEECC
Confidence 012455666666666 79999884 99998766532 23344 32 47899999999
Q ss_pred cCCccc
Q 009785 220 GCFSNL 225 (526)
Q Consensus 220 G~~S~v 225 (526)
|..+..
T Consensus 268 G~~p~~ 273 (467)
T 1zk7_A 268 GRTPNT 273 (467)
T ss_dssp CEEESC
T ss_pred CCCcCC
Confidence 987664
No 252
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.48 E-value=0.00062 Score=70.49 Aligned_cols=100 Identities=21% Similarity=0.313 Sum_probs=69.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCee
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 140 (526)
-.|+|||||+.|+-+|..|++.|.+|+++|+.+......
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~----------------------------------------- 211 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALITL----------------------------------------- 211 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTS-----------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCCC-----------------------------------------
Confidence 479999999999999999999999999999985311000
Q ss_pred eeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEec-eEEEEEeeC-CeEEEEEEEeCCCcEEEEEcCeEEEe
Q 009785 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQG-TVTSLLEEK-GTIKGVQYKTKAGEELTAYAPLTIVC 218 (526)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~-~v~~l~~~~-~~v~gv~v~~~~G~~~~i~a~~vV~A 218 (526)
....+.+.+.+.+. ++++.+ +++++..++ +.+. +++.+.+|+..++.+|.||.|
T Consensus 212 -------------------~d~~~~~~l~~~l~----v~i~~~~~v~~i~~~~~~~v~-v~~~~~~G~~~~i~~D~vi~a 267 (466)
T 3l8k_A 212 -------------------EDQDIVNTLLSILK----LNIKFNSPVTEVKKIKDDEYE-VIYSTKDGSKKSIFTNSVVLA 267 (466)
T ss_dssp -------------------CCHHHHHHHHHHHC----CCEECSCCEEEEEEEETTEEE-EEECCTTSCCEEEEESCEEEC
T ss_pred -------------------CCHHHHHHHHhcCE----EEEEECCEEEEEEEcCCCcEE-EEEEecCCceEEEEcCEEEEC
Confidence 00123344444432 778877 488888765 6443 443322676567889999999
Q ss_pred ecCCccc
Q 009785 219 DGCFSNL 225 (526)
Q Consensus 219 DG~~S~v 225 (526)
.|.....
T Consensus 268 ~G~~p~~ 274 (466)
T 3l8k_A 268 AGRRPVI 274 (466)
T ss_dssp CCEEECC
T ss_pred cCCCccc
Confidence 9987654
No 253
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.48 E-value=0.00045 Score=69.15 Aligned_cols=92 Identities=23% Similarity=0.346 Sum_probs=67.6
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCee
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 140 (526)
-+|+|||||+.|+-+|..|++.|.+|+++|+.+.... +.
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------~~----------------------------------- 182 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG------LD----------------------------------- 182 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT------CC-----------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc------CC-----------------------------------
Confidence 4799999999999999999999999999999853110 00
Q ss_pred eeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEee
Q 009785 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCD 219 (526)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~AD 219 (526)
..+.+.+.+.+++. +++++.++ ++++. .+ +|+ .++|+ +.+|.||.|.
T Consensus 183 ---------------------~~~~~~l~~~l~~~-gV~i~~~~~v~~i~--~~---~v~--~~~g~---i~~D~vi~a~ 230 (367)
T 1xhc_A 183 ---------------------EELSNMIKDMLEET-GVKFFLNSELLEAN--EE---GVL--TNSGF---IEGKVKICAI 230 (367)
T ss_dssp ---------------------HHHHHHHHHHHHHT-TEEEECSCCEEEEC--SS---EEE--ETTEE---EECSCEEEEC
T ss_pred ---------------------HHHHHHHHHHHHHC-CCEEEcCCEEEEEE--ee---EEE--ECCCE---EEcCEEEECc
Confidence 12345555666666 89999884 88886 22 233 35664 7799999999
Q ss_pred cCCccc
Q 009785 220 GCFSNL 225 (526)
Q Consensus 220 G~~S~v 225 (526)
|.....
T Consensus 231 G~~p~~ 236 (367)
T 1xhc_A 231 GIVPNV 236 (367)
T ss_dssp CEEECC
T ss_pred CCCcCH
Confidence 977654
No 254
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.46 E-value=0.00079 Score=70.22 Aligned_cols=98 Identities=20% Similarity=0.246 Sum_probs=70.6
Q ss_pred CcEEEECCCHHHHHHHHHHHh----CCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEE
Q 009785 61 ADVIVVGAGVAGAALANTLAK----DGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFK 136 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~----~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~ 136 (526)
-.|+|||||..|+-+|..|++ .|.+|+++++.+....+.
T Consensus 181 ~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~~------------------------------------- 223 (493)
T 1m6i_A 181 KSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKI------------------------------------- 223 (493)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTT-------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccccccc-------------------------------------
Confidence 479999999999999999987 478999998874210000
Q ss_pred CCeeeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeE
Q 009785 137 DGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLT 215 (526)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~v 215 (526)
-...+.+.+.+.+++. +++++.++ |+++..+++.+ .+...+|+ ++.+|.|
T Consensus 224 -----------------------l~~~~~~~~~~~l~~~-GV~v~~~~~V~~i~~~~~~~---~v~l~dG~--~i~aD~V 274 (493)
T 1m6i_A 224 -----------------------LPEYLSNWTMEKVRRE-GVKVMPNAIVQSVGVSSGKL---LIKLKDGR--KVETDHI 274 (493)
T ss_dssp -----------------------SCHHHHHHHHHHHHTT-TCEEECSCCEEEEEEETTEE---EEEETTSC--EEEESEE
T ss_pred -----------------------CCHHHHHHHHHHHHhc-CCEEEeCCEEEEEEecCCeE---EEEECCCC--EEECCEE
Confidence 0012445566666666 89999885 99988766643 44566786 4779999
Q ss_pred EEeecCCcc
Q 009785 216 IVCDGCFSN 224 (526)
Q Consensus 216 V~ADG~~S~ 224 (526)
|.|.|....
T Consensus 275 v~a~G~~pn 283 (493)
T 1m6i_A 275 VAAVGLEPN 283 (493)
T ss_dssp EECCCEEEC
T ss_pred EECCCCCcc
Confidence 999998764
No 255
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.44 E-value=0.00012 Score=80.16 Aligned_cols=36 Identities=31% Similarity=0.502 Sum_probs=33.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC
Q 009785 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (526)
Q Consensus 59 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~ 94 (526)
..+||+||||||+|+++|..|+++|++|+|+|+.+.
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~ 423 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEK 423 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 357999999999999999999999999999999864
No 256
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.43 E-value=0.00051 Score=67.61 Aligned_cols=95 Identities=21% Similarity=0.282 Sum_probs=66.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCe
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGN 139 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 139 (526)
.-+|+|||+|..|+-+|..|++.|.+|+++++.+... . .
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~---------~-----------~--------------------- 193 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFR---------A-----------S--------------------- 193 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCS---------S-----------C---------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCC---------c-----------c---------------------
Confidence 3579999999999999999999999999999874210 0 0
Q ss_pred eeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEEcCeEEE
Q 009785 140 RTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKT-KAGEELTAYAPLTIV 217 (526)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~-~~G~~~~i~a~~vV~ 217 (526)
. .+.+ .+.+..+++++.++ ++++..++ ++.+|++.+ .+|+..++.+|.||.
T Consensus 194 ------------~----------~~~~----~~~~~~gV~v~~~~~v~~i~~~~-~~~~v~~~~~~~g~~~~i~~D~vi~ 246 (335)
T 2a87_A 194 ------------K----------IMLD----RARNNDKIRFLTNHTVVAVDGDT-TVTGLRVRDTNTGAETTLPVTGVFV 246 (335)
T ss_dssp ------------T----------THHH----HHHHCTTEEEECSEEEEEEECSS-SCCEEEEEEETTSCCEEECCSCEEE
T ss_pred ------------H----------HHHH----HHhccCCcEEEeCceeEEEecCC-cEeEEEEEEcCCCceEEeecCEEEE
Confidence 0 0111 12122489999885 88887654 344566654 356555788999999
Q ss_pred eecCC
Q 009785 218 CDGCF 222 (526)
Q Consensus 218 ADG~~ 222 (526)
|.|..
T Consensus 247 a~G~~ 251 (335)
T 2a87_A 247 AIGHE 251 (335)
T ss_dssp CSCEE
T ss_pred ccCCc
Confidence 99964
No 257
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.41 E-value=0.0015 Score=68.52 Aligned_cols=99 Identities=16% Similarity=0.187 Sum_probs=68.8
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCee
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 140 (526)
-.|+|||||..|+-+|..|++.|.+|+++++.... . ..
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~l---------~-----------------~~---------------- 248 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIGLDVTVMVRSILL---------R-----------------GF---------------- 248 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSS---------T-----------------TS----------------
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEeccccc---------c-----------------cC----------------
Confidence 36999999999999999999999999999985210 0 00
Q ss_pred eeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeC----CeEEEEEEEeCCCc-EEEEEcCe
Q 009785 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEK----GTIKGVQYKTKAGE-ELTAYAPL 214 (526)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~----~~v~gv~v~~~~G~-~~~i~a~~ 214 (526)
...+.+.+.+.+++. +++++.++ ++++...+ +.+ .+++...+|. ..++.+|.
T Consensus 249 --------------------d~~~~~~~~~~l~~~-GV~v~~~~~v~~v~~~~~~~~~~~-~v~~~~~~g~~~~~~~~D~ 306 (519)
T 3qfa_A 249 --------------------DQDMANKIGEHMEEH-GIKFIRQFVPIKVEQIEAGTPGRL-RVVAQSTNSEEIIEGEYNT 306 (519)
T ss_dssp --------------------CHHHHHHHHHHHHHT-TCEEEESEEEEEEEEEECCTTCEE-EEEEEESSSSCEEEEEESE
T ss_pred --------------------CHHHHHHHHHHHHHC-CCEEEeCCeEEEEEEccCCCCceE-EEEEEECCCcEEEEEECCE
Confidence 012445555566665 79998884 77776432 333 3555555553 35678999
Q ss_pred EEEeecCCc
Q 009785 215 TIVCDGCFS 223 (526)
Q Consensus 215 vV~ADG~~S 223 (526)
||.|.|...
T Consensus 307 vi~a~G~~p 315 (519)
T 3qfa_A 307 VMLAIGRDA 315 (519)
T ss_dssp EEECSCEEE
T ss_pred EEEecCCcc
Confidence 999999654
No 258
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.40 E-value=0.001 Score=70.03 Aligned_cols=97 Identities=13% Similarity=0.136 Sum_probs=72.2
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCee
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 140 (526)
-.++|||||..|+-+|..+++.|.+|+|++++...+ .
T Consensus 224 ~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~--------------------------~----------------- 260 (542)
T 4b1b_A 224 GKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLR--------------------------G----------------- 260 (542)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSST--------------------------T-----------------
T ss_pred ceEEEECCCHHHHHHHHHHHhcCCeEEEeccccccc--------------------------c-----------------
Confidence 469999999999999999999999999998752100 0
Q ss_pred eeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEee
Q 009785 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCD 219 (526)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~AD 219 (526)
...++.+.+.+.+++. ++.++.+. +.++...++. +.+...++.. +.+|.|+.|.
T Consensus 261 -------------------~D~ei~~~l~~~l~~~-gi~~~~~~~v~~~~~~~~~---~~v~~~~~~~--~~~D~vLvAv 315 (542)
T 4b1b_A 261 -------------------FDQQCAVKVKLYMEEQ-GVMFKNGILPKKLTKMDDK---ILVEFSDKTS--ELYDTVLYAI 315 (542)
T ss_dssp -------------------SCHHHHHHHHHHHHHT-TCEEEETCCEEEEEEETTE---EEEEETTSCE--EEESEEEECS
T ss_pred -------------------cchhHHHHHHHHHHhh-cceeecceEEEEEEecCCe---EEEEEcCCCe--EEEEEEEEcc
Confidence 0113455666666666 78998885 8898888774 4455666654 4589999999
Q ss_pred cCCccc
Q 009785 220 GCFSNL 225 (526)
Q Consensus 220 G~~S~v 225 (526)
|..-.+
T Consensus 316 GR~Pnt 321 (542)
T 4b1b_A 316 GRKGDI 321 (542)
T ss_dssp CEEESC
T ss_pred cccCCc
Confidence 976654
No 259
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.40 E-value=5.4e-05 Score=79.91 Aligned_cols=50 Identities=24% Similarity=0.323 Sum_probs=39.2
Q ss_pred cCCCeEEEece-EEEEEeeCC---eEEEEEEEeCCCcEEEE---EcCeEEEeecCCc
Q 009785 174 SLPNVRLEQGT-VTSLLEEKG---TIKGVQYKTKAGEELTA---YAPLTIVCDGCFS 223 (526)
Q Consensus 174 ~~~~v~i~~~~-v~~l~~~~~---~v~gv~v~~~~G~~~~i---~a~~vV~ADG~~S 223 (526)
+.++++++.++ |+++..+++ +++||++.+.+|+.+++ .++-||.|.|+..
T Consensus 205 ~~~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa~~ 261 (536)
T 1ju2_A 205 NSNNLRVGVHASVEKIIFSNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIG 261 (536)
T ss_dssp CTTTEEEEESCEEEEEEECCSSSCBEEEEEEECTTSCEEEEEEEEEEEEEECCHHHH
T ss_pred cCCCcEEEeCCEEEEEEECCCCCCEEEEEEEEeCCCceEEEEeccCCEEEEcCcccC
Confidence 34589999885 999987653 78999998767776666 5789999999863
No 260
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.40 E-value=0.0019 Score=68.97 Aligned_cols=100 Identities=17% Similarity=0.222 Sum_probs=68.1
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCee
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 140 (526)
-+|+|||||..|+-+|..|++.|.+|+++++... . + ++
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~-l---------~---------~~----------------------- 324 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRSIL-L---------R---------GF----------------------- 324 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCS-S---------T---------TS-----------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECCcC-c---------C---------cC-----------------------
Confidence 3699999999999999999999999999998721 0 0 00
Q ss_pred eeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEee------C---CeEEEEEEEeCCCcEEEE
Q 009785 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEE------K---GTIKGVQYKTKAGEELTA 210 (526)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~------~---~~v~gv~v~~~~G~~~~i 210 (526)
...+.+.+.+.+++. +++++.++ ++++... + +.+ .+.+...+|++.++
T Consensus 325 --------------------d~~~~~~~~~~l~~~-gv~i~~~~~v~~v~~~~~~~~~~~~~~~~-~v~~~~~~g~~~~~ 382 (598)
T 2x8g_A 325 --------------------DQQMAEKVGDYMENH-GVKFAKLCVPDEIKQLKVVDTENNKPGLL-LVKGHYTDGKKFEE 382 (598)
T ss_dssp --------------------CHHHHHHHHHHHHHT-TCEEEETEEEEEEEEEECCBTTTTBCCEE-EEEEEETTSCEEEE
T ss_pred --------------------CHHHHHHHHHHHHhC-CCEEEECCeEEEEEeccccccccCCCceE-EEEEEeCCCcEEec
Confidence 001233444455555 79998884 7776532 2 333 24444567876666
Q ss_pred EcCeEEEeecCCcc
Q 009785 211 YAPLTIVCDGCFSN 224 (526)
Q Consensus 211 ~a~~vV~ADG~~S~ 224 (526)
.+|.||.|.|....
T Consensus 383 ~~D~vi~a~G~~p~ 396 (598)
T 2x8g_A 383 EFETVIFAVGREPQ 396 (598)
T ss_dssp EESEEEECSCEEEC
T ss_pred cCCEEEEEeCCccc
Confidence 79999999997543
No 261
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.38 E-value=0.00013 Score=79.13 Aligned_cols=38 Identities=32% Similarity=0.406 Sum_probs=34.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCC
Q 009785 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEP 96 (526)
Q Consensus 59 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~ 96 (526)
..+||+|||||++|+++|+.|++.|++|+|+|++....
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~g 143 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVG 143 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSB
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCC
Confidence 35799999999999999999999999999999986544
No 262
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.37 E-value=0.00015 Score=78.71 Aligned_cols=36 Identities=33% Similarity=0.458 Sum_probs=33.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC
Q 009785 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (526)
Q Consensus 59 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~ 94 (526)
..+||+|||||++|+++|..|++.|++|+|+|+.+.
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~ 407 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSE 407 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 357999999999999999999999999999999854
No 263
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.36 E-value=0.00015 Score=80.12 Aligned_cols=38 Identities=32% Similarity=0.435 Sum_probs=34.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPD 97 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~ 97 (526)
..+|+|||||++||++|+.|+++|++|+|+|+......
T Consensus 278 ~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG 315 (852)
T 2xag_A 278 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGG 315 (852)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCC
Confidence 57999999999999999999999999999999876543
No 264
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.33 E-value=0.00013 Score=76.13 Aligned_cols=38 Identities=26% Similarity=0.461 Sum_probs=33.3
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhC--CCeEEEEecCCCC
Q 009785 58 PFDADVIVVGAGVAGAALANTLAKD--GRRVHVIERDLSE 95 (526)
Q Consensus 58 ~~~~dVvIVGaG~aGl~~A~~La~~--G~~V~l~Er~~~~ 95 (526)
+.++||+|||||++|+++|..|++. |.+|+|+|+.+..
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~ 48 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPEL 48 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSC
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCC
Confidence 3468999999999999999999877 8999999998643
No 265
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.32 E-value=0.00012 Score=75.64 Aligned_cols=35 Identities=23% Similarity=0.228 Sum_probs=32.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHh-C------CCeEEEEecCCC
Q 009785 60 DADVIVVGAGVAGAALANTLAK-D------GRRVHVIERDLS 94 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~-~------G~~V~l~Er~~~ 94 (526)
.+||+||||||+|+++|..|++ + |++|+|+|+.+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~ 44 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPT 44 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCC
Confidence 4799999999999999999999 7 999999999854
No 266
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.30 E-value=0.0011 Score=70.68 Aligned_cols=96 Identities=20% Similarity=0.258 Sum_probs=70.3
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCee
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 140 (526)
-+|+|||||..|+-+|..|++.|.+|+++|+.+.....
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 225 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP------------------------------------------ 225 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccccc------------------------------------------
Confidence 47999999999999999999999999999987421100
Q ss_pred eeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEee
Q 009785 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCD 219 (526)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~AD 219 (526)
....+.+.+.+.+++. +++++.++ |+++..+++. |+ ..+|+ ++.+|.||.|.
T Consensus 226 -------------------~~~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~---v~--~~~g~--~i~~D~Vi~a~ 278 (588)
T 3ics_A 226 -------------------IDYEMAAYVHEHMKNH-DVELVFEDGVDALEENGAV---VR--LKSGS--VIQTDMLILAI 278 (588)
T ss_dssp -------------------SCHHHHHHHHHHHHHT-TCEEECSCCEEEEEGGGTE---EE--ETTSC--EEECSEEEECS
T ss_pred -------------------CCHHHHHHHHHHHHHc-CCEEEECCeEEEEecCCCE---EE--ECCCC--EEEcCEEEEcc
Confidence 0112445566666665 89999875 9998765552 33 45675 46799999999
Q ss_pred cCCccc
Q 009785 220 GCFSNL 225 (526)
Q Consensus 220 G~~S~v 225 (526)
|.....
T Consensus 279 G~~p~~ 284 (588)
T 3ics_A 279 GVQPES 284 (588)
T ss_dssp CEEECC
T ss_pred CCCCCh
Confidence 986643
No 267
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.26 E-value=0.0021 Score=63.88 Aligned_cols=105 Identities=19% Similarity=0.223 Sum_probs=67.1
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCee
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 140 (526)
-+|+|||+|.+|+-+|..|++.|.+|+++++.+.... +. . + .
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~--------~~-------~---------d-----------~--- 208 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLND--------PD-------A---------D-----------P--- 208 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECC---------------------------------------------C---
T ss_pred CEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCC--------CC-------C---------C-----------C---
Confidence 3799999999999999999999999999999843110 00 0 0 0
Q ss_pred eeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEee
Q 009785 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCD 219 (526)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~AD 219 (526)
... ....+.+.+.+.+++.++++++.++ ++++..+++. +.+...+|+.. ..+|.||.|.
T Consensus 209 ---~~~-------------~~~~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~~~---~~v~~~~g~~~-~~~d~vi~a~ 268 (369)
T 3d1c_A 209 ---SVR-------------LSPYTRQRLGNVIKQGARIEMNVHYTVKDIDFNNGQ---YHISFDSGQSV-HTPHEPILAT 268 (369)
T ss_dssp ---TTS-------------CCHHHHHHHHHHHHTTCCEEEECSCCEEEEEEETTE---EEEEESSSCCE-EESSCCEECC
T ss_pred ---Ccc-------------CCHHHHHHHHHHHhhCCcEEEecCcEEEEEEecCCc---eEEEecCCeEe-ccCCceEEee
Confidence 000 0112445555555655239999884 8888766553 34445677642 3469999999
Q ss_pred cCCc
Q 009785 220 GCFS 223 (526)
Q Consensus 220 G~~S 223 (526)
|...
T Consensus 269 G~~~ 272 (369)
T 3d1c_A 269 GFDA 272 (369)
T ss_dssp CBCG
T ss_pred ccCC
Confidence 9754
No 268
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.25 E-value=0.0013 Score=64.14 Aligned_cols=94 Identities=20% Similarity=0.158 Sum_probs=68.2
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCee
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 140 (526)
-+|+|||+|..|+-+|..|++.|.+|+++++.+.....
T Consensus 155 ~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~~------------------------------------------ 192 (332)
T 3lzw_A 155 RRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRAH------------------------------------------ 192 (332)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSSC------------------------------------------
T ss_pred CEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCcc------------------------------------------
Confidence 47999999999999999999999999999987421000
Q ss_pred eeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEEcCeEEEe
Q 009785 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKT-KAGEELTAYAPLTIVC 218 (526)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~-~~G~~~~i~a~~vV~A 218 (526)
.... +.+.+. +++++.++ ++++..+++ +.+|++.+ .+|+..++.+|.||.|
T Consensus 193 ---------------------~~~~----~~l~~~-gv~~~~~~~v~~i~~~~~-~~~v~~~~~~~g~~~~~~~D~vv~a 245 (332)
T 3lzw_A 193 ---------------------EHSV----ENLHAS-KVNVLTPFVPAELIGEDK-IEQLVLEEVKGDRKEILEIDDLIVN 245 (332)
T ss_dssp ---------------------HHHH----HHHHHS-SCEEETTEEEEEEECSSS-CCEEEEEETTSCCEEEEECSEEEEC
T ss_pred ---------------------HHHH----HHHhcC-CeEEEeCceeeEEecCCc-eEEEEEEecCCCceEEEECCEEEEe
Confidence 0001 113334 79999874 888887655 44577766 4566667889999999
Q ss_pred ecCCc
Q 009785 219 DGCFS 223 (526)
Q Consensus 219 DG~~S 223 (526)
.|...
T Consensus 246 ~G~~p 250 (332)
T 3lzw_A 246 YGFVS 250 (332)
T ss_dssp CCEEC
T ss_pred eccCC
Confidence 99543
No 269
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.20 E-value=0.002 Score=62.46 Aligned_cols=33 Identities=33% Similarity=0.396 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
-+|+|||||..|+-+|..|++.|.+|+|+||..
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~ 185 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRD 185 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CeEEEECCChHHHHHHHHHHHhCCeeeeecccc
Confidence 479999999999999999999999999999864
No 270
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.20 E-value=0.00026 Score=80.46 Aligned_cols=35 Identities=29% Similarity=0.428 Sum_probs=32.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCC-eEEEEecCCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGR-RVHVIERDLS 94 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~-~V~l~Er~~~ 94 (526)
.+||+||||||+|+++|..|++.|+ +|+|+|+.+.
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~ 222 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEY 222 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCC
Confidence 5799999999999999999999999 7999999754
No 271
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.16 E-value=0.00033 Score=73.35 Aligned_cols=59 Identities=12% Similarity=0.091 Sum_probs=44.8
Q ss_pred HHHHHHHHcCCCeEEEece-EEEEEeeC-C-eEEEEEEEeCCC---cEEEEEcCeEEEeecCCcc
Q 009785 166 QRLREKAASLPNVRLEQGT-VTSLLEEK-G-TIKGVQYKTKAG---EELTAYAPLTIVCDGCFSN 224 (526)
Q Consensus 166 ~~L~~~a~~~~~v~i~~~~-v~~l~~~~-~-~v~gv~v~~~~G---~~~~i~a~~vV~ADG~~S~ 224 (526)
..++..+.+.++++++.++ |+++..++ + .+++|++.+.+| +..+++|+.||.|.|+...
T Consensus 230 ~~~l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~s 294 (507)
T 1coy_A 230 KTYLAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGT 294 (507)
T ss_dssp TTHHHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHH
T ss_pred HHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCccCC
Confidence 3444555666789999885 99998765 4 688999876566 3567899999999998743
No 272
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.16 E-value=0.00027 Score=74.01 Aligned_cols=58 Identities=16% Similarity=0.161 Sum_probs=44.7
Q ss_pred HHHHHHHcCCCeEEEece-EEEEEeeC-C-eEEEEEEEeCCC---cEEEEEcCeEEEeecCCcc
Q 009785 167 RLREKAASLPNVRLEQGT-VTSLLEEK-G-TIKGVQYKTKAG---EELTAYAPLTIVCDGCFSN 224 (526)
Q Consensus 167 ~L~~~a~~~~~v~i~~~~-v~~l~~~~-~-~v~gv~v~~~~G---~~~~i~a~~vV~ADG~~S~ 224 (526)
.+++.+.+.++++++.++ |+++..++ + .+++|++.+.+| +..+++|+-||.|.|+...
T Consensus 226 ~~l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~~s 289 (504)
T 1n4w_A 226 TYLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGS 289 (504)
T ss_dssp THHHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHH
T ss_pred HHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCCCC
Confidence 344556667789999885 99998764 3 788999876667 5567899999999998743
No 273
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.15 E-value=0.00026 Score=73.11 Aligned_cols=35 Identities=34% Similarity=0.476 Sum_probs=32.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCC--CeEEEEecCCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDG--RRVHVIERDLS 94 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G--~~V~l~Er~~~ 94 (526)
.+||+||||||+|+.+|..|++.| .+|+|+|+.+.
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~ 42 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLV 42 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSS
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCc
Confidence 479999999999999999999998 99999999864
No 274
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.14 E-value=0.0026 Score=65.55 Aligned_cols=48 Identities=17% Similarity=0.135 Sum_probs=34.4
Q ss_pred CeEEEece-EEEEEeeC-C-eEEEEEEEeC-------------CCcEEEEEcCeEEEeecCCcc
Q 009785 177 NVRLEQGT-VTSLLEEK-G-TIKGVQYKTK-------------AGEELTAYAPLTIVCDGCFSN 224 (526)
Q Consensus 177 ~v~i~~~~-v~~l~~~~-~-~v~gv~v~~~-------------~G~~~~i~a~~vV~ADG~~S~ 224 (526)
++.+++++ ++++..++ + .+.+|++... +|+..++.+|+||.|.|..+.
T Consensus 271 gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~ 334 (460)
T 1cjc_A 271 AWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSR 334 (460)
T ss_dssp EEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEECC
T ss_pred eEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCCC
Confidence 78999885 88887553 4 5666766431 455567899999999997653
No 275
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.04 E-value=0.0021 Score=67.71 Aligned_cols=35 Identities=26% Similarity=0.382 Sum_probs=32.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~ 94 (526)
.-+|+|||+|.+|+-+|..|++.|.+|++++|.+.
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred cceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 35799999999999999999999999999999865
No 276
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=96.96 E-value=0.0042 Score=63.79 Aligned_cols=96 Identities=24% Similarity=0.340 Sum_probs=67.4
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCee
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 140 (526)
-+|+|||||..|+-+|..|++.|.+|+++|+.+......
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~----------------------------------------- 187 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRRS----------------------------------------- 187 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT-----------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhh-----------------------------------------
Confidence 389999999999999999999999999999985211000
Q ss_pred eeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEee
Q 009785 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCD 219 (526)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~AD 219 (526)
....+.+.+.+.+++. ++++.++ +.++..++ ++..+ ..+|+ ++.+|.||.|.
T Consensus 188 -------------------~~~~~~~~l~~~l~~~--v~i~~~~~v~~i~~~~-~v~~v---~~~g~--~i~~D~Vv~a~ 240 (449)
T 3kd9_A 188 -------------------FDKEVTDILEEKLKKH--VNLRLQEITMKIEGEE-RVEKV---VTDAG--EYKAELVILAT 240 (449)
T ss_dssp -------------------SCHHHHHHHHHHHTTT--SEEEESCCEEEEECSS-SCCEE---EETTE--EEECSEEEECS
T ss_pred -------------------cCHHHHHHHHHHHHhC--cEEEeCCeEEEEeccC-cEEEE---EeCCC--EEECCEEEEee
Confidence 0013455666666554 8888875 88887554 33222 23454 47799999999
Q ss_pred cCCcc
Q 009785 220 GCFSN 224 (526)
Q Consensus 220 G~~S~ 224 (526)
|....
T Consensus 241 G~~p~ 245 (449)
T 3kd9_A 241 GIKPN 245 (449)
T ss_dssp CEEEC
T ss_pred CCccC
Confidence 97643
No 277
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.96 E-value=0.0024 Score=65.80 Aligned_cols=59 Identities=15% Similarity=0.088 Sum_probs=39.0
Q ss_pred HHHHHHHHHHcC-----CCeEEEece-EEEEEeeCCeEEEEEEEe--------------CCCcEEEEEcCeEEEeecCCc
Q 009785 164 FVQRLREKAASL-----PNVRLEQGT-VTSLLEEKGTIKGVQYKT--------------KAGEELTAYAPLTIVCDGCFS 223 (526)
Q Consensus 164 l~~~L~~~a~~~-----~~v~i~~~~-v~~l~~~~~~v~gv~v~~--------------~~G~~~~i~a~~vV~ADG~~S 223 (526)
+.+.|.+.+.+. .++.+++++ ++++..+ +++.+|++.. .+|+..++.+|+||.|.|..+
T Consensus 248 ~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~-~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p 326 (456)
T 1lqt_A 248 NIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGK-RKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRG 326 (456)
T ss_dssp HHHHHHHHHTCC-CTTSEEEEEECSEEEEEEECS-SSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEEC
T ss_pred HHHHHHHHhhcCCCCCCceEEEEeCCCCeEEecC-CcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEcccccc
Confidence 345566655552 379999885 8888754 4444555542 245556788999999999654
No 278
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=96.94 E-value=0.0026 Score=65.16 Aligned_cols=33 Identities=30% Similarity=0.425 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
-+|+|||||+.|+-+|..+++.|.+|+|+|+.+
T Consensus 148 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 180 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLYERGLHPTLIHRSD 180 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESSS
T ss_pred cEEEEECCccchhhhHHHHHhcCCcceeeeeec
Confidence 379999999999999999999999999999985
No 279
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=96.92 E-value=0.00033 Score=75.52 Aligned_cols=36 Identities=28% Similarity=0.361 Sum_probs=33.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCC--------CeEEEEecCC-CC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDG--------RRVHVIERDL-SE 95 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G--------~~V~l~Er~~-~~ 95 (526)
..+|+|||||++||++|+.|++.| ++|+|+|+++ ..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 468999999999999999999999 9999999987 54
No 280
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=96.91 E-value=0.0039 Score=65.02 Aligned_cols=96 Identities=18% Similarity=0.201 Sum_probs=65.1
Q ss_pred cEEEECCCHHHHHHHHHHHhC--------------CCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccce
Q 009785 62 DVIVVGAGVAGAALANTLAKD--------------GRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQ 127 (526)
Q Consensus 62 dVvIVGaG~aGl~~A~~La~~--------------G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~ 127 (526)
.++|||||++|+-+|..|+.. ..+|+|+|..+...+.
T Consensus 219 ~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~----------------------------- 269 (502)
T 4g6h_A 219 SIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNM----------------------------- 269 (502)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTT-----------------------------
T ss_pred ceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccccC-----------------------------
Confidence 599999999999999988753 2578888877421000
Q ss_pred eeeeeEEEECCeeeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCc
Q 009785 128 RVFGYALFKDGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGE 206 (526)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~ 206 (526)
-...+.+.+.+.+++. +|+++.++ |+++.. +.+. +.....||+
T Consensus 270 --------------------------------~~~~~~~~~~~~L~~~-GV~v~~~~~v~~v~~--~~~~-~~~~~~dg~ 313 (502)
T 4g6h_A 270 --------------------------------FEKKLSSYAQSHLENT-SIKVHLRTAVAKVEE--KQLL-AKTKHEDGK 313 (502)
T ss_dssp --------------------------------SCHHHHHHHHHHHHHT-TCEEETTEEEEEECS--SEEE-EEEECTTSC
T ss_pred --------------------------------CCHHHHHHHHHHHHhc-ceeeecCceEEEEeC--CceE-EEEEecCcc
Confidence 0123455566666666 89999885 888753 3222 344456665
Q ss_pred E--EEEEcCeEEEeecCC
Q 009785 207 E--LTAYAPLTIVCDGCF 222 (526)
Q Consensus 207 ~--~~i~a~~vV~ADG~~ 222 (526)
. .++.+|+||-|.|..
T Consensus 314 ~~~~~i~ad~viwa~Gv~ 331 (502)
T 4g6h_A 314 ITEETIPYGTLIWATGNK 331 (502)
T ss_dssp EEEEEEECSEEEECCCEE
T ss_pred cceeeeccCEEEEccCCc
Confidence 3 468899999999953
No 281
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=96.88 E-value=0.0011 Score=70.65 Aligned_cols=41 Identities=29% Similarity=0.468 Sum_probs=36.4
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCC
Q 009785 57 CPFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPD 97 (526)
Q Consensus 57 ~~~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~ 97 (526)
++++|||+|||+|..|+.+|..|++.|.+|+++||++.-..
T Consensus 5 ~~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg 45 (650)
T 1vg0_A 5 LPSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGG 45 (650)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCG
T ss_pred CCCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccC
Confidence 34579999999999999999999999999999999975443
No 282
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=96.74 E-value=0.003 Score=71.30 Aligned_cols=93 Identities=20% Similarity=0.214 Sum_probs=69.8
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECCee
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNR 140 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 140 (526)
-.|+|||+|+.|+-+|..|++.|.+|+|+|+.+... +
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~---------~---------------------------------- 321 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSIS---------A---------------------------------- 321 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCC---------H----------------------------------
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccc---------h----------------------------------
Confidence 479999999999999999999999999999985210 0
Q ss_pred eeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEee-CCeEEEEEEEe--C---CCcEEEEEcC
Q 009785 141 TQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEE-KGTIKGVQYKT--K---AGEELTAYAP 213 (526)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~-~~~v~gv~v~~--~---~G~~~~i~a~ 213 (526)
. .+.+++. +++++.++ ++++..+ ++++.+|++.+ . +|+..++.+|
T Consensus 322 ----------------------~-----~~~l~~~-GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D 373 (965)
T 2gag_A 322 ----------------------A-----AAQAVAD-GVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEAD 373 (965)
T ss_dssp ----------------------H-----HHHHHHT-TCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECS
T ss_pred ----------------------h-----HHHHHhC-CeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcC
Confidence 0 1223344 78898885 8888764 56676777765 2 3545678999
Q ss_pred eEEEeecCCcc
Q 009785 214 LTIVCDGCFSN 224 (526)
Q Consensus 214 ~vV~ADG~~S~ 224 (526)
.||.|.|....
T Consensus 374 ~Vv~a~G~~P~ 384 (965)
T 2gag_A 374 VLAVAGGFNPV 384 (965)
T ss_dssp EEEEECCEEEC
T ss_pred EEEECCCcCcC
Confidence 99999997554
No 283
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=96.71 E-value=0.024 Score=54.73 Aligned_cols=32 Identities=22% Similarity=0.353 Sum_probs=30.7
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 62 DVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 62 dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
+|+|||||..|+-+|..|++.|.+|+|+|+.+
T Consensus 147 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 178 (312)
T 4gcm_A 147 RLFVIGGGDSAVEEGTFLTKFADKVTIVHRRD 178 (312)
T ss_dssp EEEEECCSHHHHHHHHHHTTTCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhcCCEEEEEeccc
Confidence 79999999999999999999999999999875
No 284
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=96.71 E-value=0.003 Score=60.52 Aligned_cols=33 Identities=15% Similarity=0.145 Sum_probs=30.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
.-+|+|||+|+.|+-+|..|++.| +|+++++.+
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~ 173 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGI 173 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTT
T ss_pred CCEEEEEecCccHHHHHHHhhhcC-cEEEEECCC
Confidence 357999999999999999999999 999998764
No 285
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.53 E-value=0.0095 Score=67.69 Aligned_cols=32 Identities=34% Similarity=0.410 Sum_probs=30.2
Q ss_pred cEEEECCCHHHHHHHHHHHhCCC-eEEEEecCC
Q 009785 62 DVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (526)
Q Consensus 62 dVvIVGaG~aGl~~A~~La~~G~-~V~l~Er~~ 93 (526)
+|+|||||..|+-+|..+++.|. +|+|++|++
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred cEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 89999999999999999999996 899999974
No 286
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=96.51 E-value=0.0046 Score=65.20 Aligned_cols=34 Identities=24% Similarity=0.405 Sum_probs=32.1
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~ 94 (526)
-+|+|||+|.+|+-+|..|++.|.+|+|++|.+.
T Consensus 186 krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 186 KRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred CeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 4799999999999999999999999999999875
No 287
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=96.50 E-value=0.0031 Score=64.96 Aligned_cols=34 Identities=24% Similarity=0.351 Sum_probs=30.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCC-eEEEEecCCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGR-RVHVIERDLS 94 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~-~V~l~Er~~~ 94 (526)
-+|+|||||.+|+-+|..+.+.|. +|++++|++.
T Consensus 265 k~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~ 299 (456)
T 2vdc_G 265 KHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDR 299 (456)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCS
T ss_pred CEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCc
Confidence 479999999999999999999998 5999998853
No 288
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=96.47 E-value=0.0096 Score=64.73 Aligned_cols=96 Identities=16% Similarity=0.136 Sum_probs=65.4
Q ss_pred CcEEEEC--CCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCcchhhcccceeeeeeEEEECC
Q 009785 61 ADVIVVG--AGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDG 138 (526)
Q Consensus 61 ~dVvIVG--aG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 138 (526)
-+|+||| +|..|+-+|..|++.|.+|+++++.+...... ..
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~----------------------~~--------------- 566 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWT----------------------NN--------------- 566 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGG----------------------GG---------------
T ss_pred CEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccccccccc----------------------cc---------------
Confidence 4699999 99999999999999999999999875311000 00
Q ss_pred eeeeecCCCcCCCCCcccceeechHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEEcCeEE
Q 009785 139 NRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKT-KAGEELTAYAPLTI 216 (526)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~-~~G~~~~i~a~~vV 216 (526)
..+...+.+.+++. +++++.++ |+++..++ +.+.. .+++..++.+|.||
T Consensus 567 -----------------------~~~~~~l~~~l~~~-GV~i~~~~~V~~i~~~~-----~~v~~~~~~~~~~i~aD~VV 617 (690)
T 3k30_A 567 -----------------------TFEVNRIQRRLIEN-GVARVTDHAVVAVGAGG-----VTVRDTYASIERELECDAVV 617 (690)
T ss_dssp -----------------------GTCHHHHHHHHHHT-TCEEEESEEEEEEETTE-----EEEEETTTCCEEEEECSEEE
T ss_pred -----------------------chhHHHHHHHHHHC-CCEEEcCcEEEEEECCe-----EEEEEccCCeEEEEECCEEE
Confidence 00123445555555 89999885 88886432 23332 23444568899999
Q ss_pred EeecCC
Q 009785 217 VCDGCF 222 (526)
Q Consensus 217 ~ADG~~ 222 (526)
.|.|..
T Consensus 618 ~A~G~~ 623 (690)
T 3k30_A 618 MVTARL 623 (690)
T ss_dssp EESCEE
T ss_pred ECCCCC
Confidence 999954
No 289
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=96.33 E-value=0.011 Score=60.51 Aligned_cols=33 Identities=18% Similarity=0.188 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCe-EEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRR-VHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~-V~l~Er~~ 93 (526)
-+|+|||||.+|+-+|..|++.|.+ |++++|.+
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~ 246 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGG 246 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred CEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCC
Confidence 4799999999999999999999999 99999975
No 290
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=96.26 E-value=0.018 Score=60.75 Aligned_cols=35 Identities=23% Similarity=0.404 Sum_probs=32.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~ 94 (526)
.-+|+|||+|.+|+-+|..|++.|.+|++++|.+.
T Consensus 191 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 191 GKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 35799999999999999999999999999999874
No 291
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=96.21 E-value=0.0033 Score=63.18 Aligned_cols=37 Identities=16% Similarity=0.276 Sum_probs=33.3
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPD 97 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~ 97 (526)
-+|+|||||..|+-+|..|++.|.+|+|+|+.+....
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~ 183 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLE 183 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccch
Confidence 4799999999999999999999999999999875433
No 292
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.01 E-value=0.0068 Score=52.27 Aligned_cols=35 Identities=23% Similarity=0.474 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~ 94 (526)
...|+|+|+|..|..+|..|.+.|.+|+++|+++.
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 35799999999999999999999999999999753
No 293
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=96.01 E-value=0.024 Score=58.38 Aligned_cols=34 Identities=15% Similarity=0.211 Sum_probs=31.5
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~ 94 (526)
-+|+|||||.+|+-+|..|++.|.+|+++++++.
T Consensus 198 k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~ 231 (464)
T 2xve_A 198 KTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTA 231 (464)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCC
Confidence 4799999999999999999999999999998753
No 294
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=95.95 E-value=0.028 Score=60.76 Aligned_cols=50 Identities=16% Similarity=0.188 Sum_probs=34.3
Q ss_pred HHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEeecCCc
Q 009785 167 RLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFS 223 (526)
Q Consensus 167 ~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~ADG~~S 223 (526)
.+.+.+++. +++++.++ ++++.. ++ +++. .+|+..++.+|.||.|.|...
T Consensus 578 ~~~~~l~~~-GV~v~~~~~v~~i~~--~~---v~~~-~~G~~~~i~~D~Vi~a~G~~p 628 (671)
T 1ps9_A 578 IHRTTLLSR-GVKMIPGVSYQKIDD--DG---LHVV-INGETQVLAVDNVVICAGQEP 628 (671)
T ss_dssp HHHHHHHHT-TCEEECSCEEEEEET--TE---EEEE-ETTEEEEECCSEEEECCCEEE
T ss_pred HHHHHHHhc-CCEEEeCcEEEEEeC--Ce---EEEe-cCCeEEEEeCCEEEECCCccc
Confidence 344555555 89999885 888763 32 3443 467656789999999999643
No 295
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.93 E-value=0.012 Score=49.82 Aligned_cols=33 Identities=27% Similarity=0.384 Sum_probs=31.3
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
-.|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 479999999999999999999999999999985
No 296
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.79 E-value=0.0099 Score=49.80 Aligned_cols=33 Identities=30% Similarity=0.551 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
..|+|+|+|..|..+|..|.+.|.+|+++|+++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 579999999999999999999999999999874
No 297
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.54 E-value=0.016 Score=49.66 Aligned_cols=33 Identities=24% Similarity=0.284 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
-.|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 479999999999999999999999999999974
No 298
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.47 E-value=0.015 Score=48.99 Aligned_cols=33 Identities=27% Similarity=0.558 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
..|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 369999999999999999999999999999974
No 299
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.23 E-value=0.02 Score=46.30 Aligned_cols=33 Identities=36% Similarity=0.507 Sum_probs=30.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhCC-CeEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDG-RRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G-~~V~l~Er~~ 93 (526)
..|+|+|+|..|..++..|.+.| .+|++++|++
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 47999999999999999999999 8999999974
No 300
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=95.21 E-value=0.049 Score=59.48 Aligned_cols=33 Identities=21% Similarity=0.344 Sum_probs=30.9
Q ss_pred CcEEEEC--CCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVG--AGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVG--aG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
-+|+||| ||..|+-+|..|++.|.+|+|+++.+
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 4799998 99999999999999999999999984
No 301
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=94.80 E-value=0.11 Score=52.76 Aligned_cols=52 Identities=15% Similarity=0.146 Sum_probs=35.3
Q ss_pred HHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEeecCC
Q 009785 165 VQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCF 222 (526)
Q Consensus 165 ~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~ADG~~ 222 (526)
.+.+.+.+++. +|+++.++ |++++.+ ++++.+.+++..++.+|+||.|.|..
T Consensus 203 ~~~l~~~l~~~-GV~i~~~~~v~~v~~~-----~v~~~~~~~~g~~i~~D~vv~a~G~~ 255 (430)
T 3h28_A 203 KRLVEDLFAER-NIDWIANVAVKAIEPD-----KVIYEDLNGNTHEVPAKFTMFMPSFQ 255 (430)
T ss_dssp HHHHHHHHHHT-TCEEECSCEEEEECSS-----EEEEECTTSCEEEEECSEEEEECEEE
T ss_pred HHHHHHHHHHC-CCEEEeCCEEEEEeCC-----eEEEEecCCCceEEeeeEEEECCCCc
Confidence 34555555665 89999885 8888542 24555544444578899999999854
No 302
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=94.75 E-value=0.18 Score=51.28 Aligned_cols=52 Identities=13% Similarity=0.132 Sum_probs=32.7
Q ss_pred HHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCc---EEEEEcCeEEEeecC
Q 009785 166 QRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGE---ELTAYAPLTIVCDGC 221 (526)
Q Consensus 166 ~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~---~~~i~a~~vV~ADG~ 221 (526)
..+.+.+++. +|+++.++ |+++.. +++. ++..+.+|+ ..++.+|++|.|.|.
T Consensus 212 ~~~~~~l~~~-gI~~~~~~~v~~v~~--~~v~-~~~~~~~g~~~~~~~i~~D~vv~~~g~ 267 (437)
T 3sx6_A 212 GILTKGLKEE-GIEAYTNCKVTKVED--NKMY-VTQVDEKGETIKEMVLPVKFGMMIPAF 267 (437)
T ss_dssp HHHHHHHHHT-TCEEECSEEEEEEET--TEEE-EEEECTTSCEEEEEEEECSEEEEECCE
T ss_pred HHHHHHHHHC-CCEEEcCCEEEEEEC--CeEE-EEecccCCccccceEEEEeEEEEcCCC
Confidence 4444555555 89999885 888754 3322 222234553 356889999999884
No 303
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=94.63 E-value=0.03 Score=46.99 Aligned_cols=32 Identities=22% Similarity=0.429 Sum_probs=30.2
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 62 DVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 62 dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
.|+|+|+|..|..+|..|.+.|.+|+++|+++
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred cEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 59999999999999999999999999999874
No 304
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.62 E-value=0.037 Score=48.94 Aligned_cols=34 Identities=26% Similarity=0.358 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHhC-CCeEEEEecCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKD-GRRVHVIERDL 93 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~-G~~V~l~Er~~ 93 (526)
.-.|+|+|+|..|..+|..|.+. |++|+++|+++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 34799999999999999999999 99999999984
No 305
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=94.31 E-value=0.088 Score=50.56 Aligned_cols=32 Identities=3% Similarity=0.070 Sum_probs=25.9
Q ss_pred CcEEEECCCH-HHHHHHHHHHhCCCeEEEEecC
Q 009785 61 ADVIVVGAGV-AGAALANTLAKDGRRVHVIERD 92 (526)
Q Consensus 61 ~dVvIVGaG~-aGl~~A~~La~~G~~V~l~Er~ 92 (526)
-+++|||||. +++.+|..+++.|.+|+++++.
T Consensus 147 ~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~ 179 (304)
T 4fk1_A 147 QPLIIISENEDHTLHMTKLVYNWSTDLVIATNG 179 (304)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTTCSCEEEECSS
T ss_pred CceeeecCCCchhhhHHHHHHhCCceEEEEecc
Confidence 4678888875 5678888888899999998775
No 306
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.22 E-value=0.037 Score=50.49 Aligned_cols=33 Identities=24% Similarity=0.381 Sum_probs=30.9
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC
Q 009785 62 DVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (526)
Q Consensus 62 dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~ 94 (526)
.|+|+|+|..|..+|..|.+.|++|+++|+++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 34 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDRE 34 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 599999999999999999999999999998853
No 307
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=93.95 E-value=0.059 Score=51.44 Aligned_cols=33 Identities=30% Similarity=0.416 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
..|.|||+|..|...|..|++.|++|+++|+++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 369999999999999999999999999999884
No 308
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=93.85 E-value=0.053 Score=52.71 Aligned_cols=34 Identities=24% Similarity=0.392 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCC-eEEEEecCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~-~V~l~Er~~ 93 (526)
...|.|||+|-.|.++|..|++.|+ +|+++|+++
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 4579999999999999999999998 999999974
No 309
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=93.78 E-value=0.053 Score=52.54 Aligned_cols=33 Identities=33% Similarity=0.585 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
-.|.|||||..|...|..++..|++|+|+|.++
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 469999999999999999999999999999874
No 310
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=93.76 E-value=0.058 Score=52.51 Aligned_cols=32 Identities=34% Similarity=0.631 Sum_probs=30.5
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERD 92 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~ 92 (526)
.+|.|||+|..|.+.|..|++.|.+|++++|+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRS 34 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 57999999999999999999999999999987
No 311
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=93.34 E-value=0.088 Score=47.70 Aligned_cols=35 Identities=17% Similarity=0.341 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~ 94 (526)
...|.|||+|-.|.+.|..|++.|.+|++++|++.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 35799999999999999999999999999998753
No 312
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=93.19 E-value=0.088 Score=50.10 Aligned_cols=33 Identities=27% Similarity=0.383 Sum_probs=30.8
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC
Q 009785 62 DVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (526)
Q Consensus 62 dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~ 94 (526)
.|.|||+|..|...|..|++.|++|++++|++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 589999999999999999999999999999853
No 313
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=93.18 E-value=0.068 Score=51.77 Aligned_cols=32 Identities=31% Similarity=0.537 Sum_probs=29.9
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERD 92 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~ 92 (526)
.+|.|||+|-.|.+.|..|++.|.+|++++|+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcC
Confidence 47999999999999999999999999999986
No 314
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=93.10 E-value=0.08 Score=50.99 Aligned_cols=32 Identities=31% Similarity=0.578 Sum_probs=30.4
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 62 DVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 62 dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
.|.|||+|..|...|..|++.|++|+++|+++
T Consensus 17 ~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 59999999999999999999999999999984
No 315
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=93.05 E-value=0.1 Score=50.72 Aligned_cols=33 Identities=21% Similarity=0.438 Sum_probs=30.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCC-eEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~-~V~l~Er~~ 93 (526)
..|.|||||-.|.++|..|+..|+ +|+++|.+.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 579999999999999999999998 999999874
No 316
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=93.04 E-value=0.048 Score=55.99 Aligned_cols=60 Identities=22% Similarity=0.379 Sum_probs=42.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcc----cceee--CcchHHHHHHcCCcc
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRI----VGELL--QPGGYLKLIELGLED 119 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~----~g~~l--~~~~~~~l~~lGl~~ 119 (526)
.+.|+|+|+|-.|..+|..|...|++|+|+|+++..-.+. -...+ ...-.+.|++.|+.+
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ 68 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQD 68 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTT
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCc
Confidence 3679999999999999999999999999999985321110 01112 223346788888763
No 317
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=93.01 E-value=0.1 Score=52.10 Aligned_cols=33 Identities=33% Similarity=0.410 Sum_probs=31.3
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
..|+|+|+|++|+.+|..|...|.+|+++|+++
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 579999999999999999999999999999985
No 318
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=92.97 E-value=0.18 Score=51.38 Aligned_cols=34 Identities=24% Similarity=0.436 Sum_probs=31.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~ 94 (526)
..|.|||+|..|...|..|++.|++|+++|++++
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 4699999999999999999999999999999854
No 319
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=92.95 E-value=0.09 Score=51.84 Aligned_cols=33 Identities=33% Similarity=0.404 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
..|.|||+|-.|...|..|++.|++|++++|++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 579999999999999999999999999999873
No 320
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=92.92 E-value=0.099 Score=47.79 Aligned_cols=33 Identities=21% Similarity=0.424 Sum_probs=30.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERD 92 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~ 92 (526)
.-.|+|||||.+|...|..|.+.|.+|+|+++.
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 357999999999999999999999999999875
No 321
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=92.91 E-value=0.089 Score=51.43 Aligned_cols=33 Identities=18% Similarity=0.246 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCC-eEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~-~V~l~Er~~ 93 (526)
..|.|||||-.|.++|..|++.|+ +|+++|++.
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 579999999999999999999998 999999984
No 322
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=92.90 E-value=0.097 Score=51.24 Aligned_cols=32 Identities=34% Similarity=0.617 Sum_probs=30.3
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERD 92 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~ 92 (526)
..|.|||+|-.|.+.|..|++.|.+|++++|+
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 57999999999999999999999999999985
No 323
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=92.90 E-value=0.075 Score=54.20 Aligned_cols=35 Identities=17% Similarity=0.469 Sum_probs=31.9
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSE 95 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~ 95 (526)
..|+|||.|++|+++|..|+++|++|++.|.+...
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTP 40 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSC
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCc
Confidence 36999999999999999999999999999998643
No 324
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=92.73 E-value=0.12 Score=50.44 Aligned_cols=33 Identities=21% Similarity=0.322 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCC-eEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~-~V~l~Er~~ 93 (526)
..|.|||||..|.++|..|++.|+ +|+++|++.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 479999999999999999999998 999999984
No 325
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=92.71 E-value=0.086 Score=50.65 Aligned_cols=35 Identities=20% Similarity=0.268 Sum_probs=32.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~ 94 (526)
...|.|||.|..|...|..|++.|++|++++|++.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 46899999999999999999999999999999864
No 326
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=92.71 E-value=0.1 Score=50.53 Aligned_cols=33 Identities=27% Similarity=0.422 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCC--eEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGR--RVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~--~V~l~Er~~ 93 (526)
..|+|||+|-.|.++|..|++.|. +|+++|++.
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 579999999999999999999998 999999873
No 327
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=92.70 E-value=0.16 Score=49.46 Aligned_cols=34 Identities=18% Similarity=0.220 Sum_probs=30.6
Q ss_pred CcEEEECCCHHHHH-HHHHHHhCCCeEEEEecCCC
Q 009785 61 ADVIVVGAGVAGAA-LANTLAKDGRRVHVIERDLS 94 (526)
Q Consensus 61 ~dVvIVGaG~aGl~-~A~~La~~G~~V~l~Er~~~ 94 (526)
..|.|||.|.+|++ +|..|.++|++|.+.|++..
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 36999999999996 89999999999999999853
No 328
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=92.64 E-value=0.11 Score=53.65 Aligned_cols=34 Identities=24% Similarity=0.458 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
.+.|.|||+|-.|+.+|..|++.|++|+++|+++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4789999999999999999999999999999874
No 329
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=92.50 E-value=0.091 Score=49.09 Aligned_cols=33 Identities=30% Similarity=0.499 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCC-eEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~-~V~l~Er~~ 93 (526)
..|+|||+|-.|..+|..|++.|+ +++|+|++.
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 579999999999999999999998 899999985
No 330
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=92.48 E-value=0.074 Score=50.26 Aligned_cols=34 Identities=24% Similarity=0.513 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
...|+|||||.+|+..|..|.+.|.+|+|++.+.
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 3579999999999999999999999999999763
No 331
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=92.46 E-value=0.11 Score=50.50 Aligned_cols=33 Identities=33% Similarity=0.585 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
..|.|||+|..|...|..|++.|++|+++|+++
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999999985
No 332
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=92.43 E-value=0.098 Score=53.55 Aligned_cols=49 Identities=31% Similarity=0.348 Sum_probs=38.9
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceeeCcchHHHHHHcCCc
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLE 118 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~ 118 (526)
-.|.|||.|.+|+++|..|.++|++|++.|++... .+...+.|++.|+.
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~---------~~~~~~~L~~~gi~ 58 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFD---------ENPTAQSLLEEGIK 58 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGG---------GCHHHHHHHHTTCE
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCccc---------CChHHHHHHhCCCE
Confidence 47999999999999999999999999999997521 12334567777763
No 333
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=92.42 E-value=0.12 Score=49.90 Aligned_cols=33 Identities=27% Similarity=0.461 Sum_probs=30.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
..|.|||+|..|...|..|++.|++|++++|++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 469999999999999999999999999999873
No 334
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=92.30 E-value=0.12 Score=52.79 Aligned_cols=33 Identities=36% Similarity=0.513 Sum_probs=31.2
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
..|.|||+|-.|+.+|..|++.|++|+++|+++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 479999999999999999999999999999984
No 335
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=92.27 E-value=0.13 Score=51.81 Aligned_cols=34 Identities=26% Similarity=0.420 Sum_probs=31.8
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~ 94 (526)
..|+|||.|..|..+|..|.+.|++|+++|+++.
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 4799999999999999999999999999999854
No 336
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=92.26 E-value=0.13 Score=50.85 Aligned_cols=37 Identities=22% Similarity=0.340 Sum_probs=32.0
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 57 CPFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 57 ~~~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
|....+|.|||.|..|...|..|++.|++|++++|++
T Consensus 19 Mm~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 19 YFQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred hhcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4445789999999999999999999999999999874
No 337
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=92.24 E-value=0.088 Score=50.51 Aligned_cols=33 Identities=24% Similarity=0.435 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
.+|.|||+|-.|.+.|..|++.|.+|++++|+.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 479999999999999999999999999999984
No 338
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=92.17 E-value=0.14 Score=52.04 Aligned_cols=35 Identities=17% Similarity=0.412 Sum_probs=32.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~ 94 (526)
...+.|||.|-.|+.+|..|++.|++|+++++++.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 47899999999999999999999999999999865
No 339
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=91.99 E-value=0.067 Score=45.20 Aligned_cols=33 Identities=21% Similarity=0.439 Sum_probs=30.4
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
..|+|||+|..|...|..|.+.|.+|++++|++
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 369999999999999999999999999999874
No 340
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=91.88 E-value=0.71 Score=46.19 Aligned_cols=49 Identities=16% Similarity=0.188 Sum_probs=33.2
Q ss_pred HHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEeecCC
Q 009785 164 FVQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCF 222 (526)
Q Consensus 164 l~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~ADG~~ 222 (526)
+.+.+.+.+++. +++++.++ |+++..+ . | ...+|+ ++.+|.||.|.|..
T Consensus 220 ~~~~~~~~l~~~-gV~~~~~~~v~~i~~~--~---v--~~~~g~--~~~~D~vi~a~G~~ 269 (409)
T 3h8l_A 220 SRKAVASIYNQL-GIKLVHNFKIKEIREH--E---I--VDEKGN--TIPADITILLPPYT 269 (409)
T ss_dssp HHHHHHHHHHHH-TCEEECSCCEEEECSS--E---E--EETTSC--EEECSEEEEECCEE
T ss_pred HHHHHHHHHHHC-CCEEEcCCceEEECCC--e---E--EECCCC--EEeeeEEEECCCCC
Confidence 444555555555 89999875 8888643 2 3 346676 46799999999854
No 341
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=91.81 E-value=0.12 Score=51.06 Aligned_cols=33 Identities=27% Similarity=0.352 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
-.|+|+|+|.+|+.+|..|...|.+|+++|+++
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 579999999999999999999999999999984
No 342
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=91.80 E-value=0.15 Score=51.61 Aligned_cols=34 Identities=15% Similarity=0.222 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~ 94 (526)
...|.|||+|-.|+.+|..|++ |++|+++|+++.
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~ 69 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQA 69 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHH
T ss_pred CCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHH
Confidence 4689999999999999999998 999999999853
No 343
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=91.80 E-value=0.16 Score=49.01 Aligned_cols=33 Identities=36% Similarity=0.572 Sum_probs=31.2
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
..|.|||.|..|...|..|++.|++|++++|++
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 579999999999999999999999999999985
No 344
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=91.77 E-value=0.15 Score=52.37 Aligned_cols=34 Identities=24% Similarity=0.267 Sum_probs=32.1
Q ss_pred CcEEEECCCHHHHHHHHHHHhC-CC-eEEEEecCCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKD-GR-RVHVIERDLS 94 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~-G~-~V~l~Er~~~ 94 (526)
..|.|||+|-.|+.+|..|++. |+ +|+++|+++.
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 5799999999999999999999 99 9999999865
No 345
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=91.75 E-value=0.16 Score=49.65 Aligned_cols=35 Identities=29% Similarity=0.476 Sum_probs=31.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 59 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
+++.|.|||+|-.|.+.|..|++.|.+|++++|++
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 35789999999999999999999999999999873
No 346
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=91.67 E-value=0.18 Score=49.80 Aligned_cols=34 Identities=32% Similarity=0.526 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
...|.|||+|-.|.++|..|++.|.+|++++|++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3579999999999999999999999999999974
No 347
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=91.66 E-value=0.16 Score=48.86 Aligned_cols=32 Identities=34% Similarity=0.519 Sum_probs=30.0
Q ss_pred cEEEECCCHHHHHHHHHHHhCCC--eEEEEecCC
Q 009785 62 DVIVVGAGVAGAALANTLAKDGR--RVHVIERDL 93 (526)
Q Consensus 62 dVvIVGaG~aGl~~A~~La~~G~--~V~l~Er~~ 93 (526)
.|.|||+|-.|.++|..|+..|+ +|+++|++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 59999999999999999999998 999999873
No 348
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=91.54 E-value=0.18 Score=51.70 Aligned_cols=35 Identities=20% Similarity=0.363 Sum_probs=32.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~ 94 (526)
.-+|+|||||+.|+-+|..|++.|.+|+++|+.+.
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~ 204 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKE 204 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCc
Confidence 35799999999999999999999999999999864
No 349
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=91.51 E-value=0.17 Score=48.84 Aligned_cols=32 Identities=25% Similarity=0.297 Sum_probs=29.9
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
.+|.|||+|-.|.+.|..|+ .|.+|++++|+.
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 57999999999999999999 999999999873
No 350
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=91.40 E-value=0.18 Score=49.98 Aligned_cols=33 Identities=24% Similarity=0.531 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
-.|+|+|+|.+|+.++..|+..|.+|+++++++
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 479999999999999999999999999999873
No 351
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=91.37 E-value=0.23 Score=52.30 Aligned_cols=57 Identities=19% Similarity=0.201 Sum_probs=42.3
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCCcccceee--CcchHHHHHHcCCc
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPDRIVGELL--QPGGYLKLIELGLE 118 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~~~~g~~l--~~~~~~~l~~lGl~ 118 (526)
-.|+|+|+|..|..+|..|.+.|++|+++|+++..-.... ..+ .+.-.+.|++.|+.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~-~~i~gD~t~~~~L~~agi~ 407 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPVCNDH-VVVYGDATVGQTLRQAGID 407 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSSCCSS-CEEESCSSSSTHHHHHTTT
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHHhhcC-CEEEeCCCCHHHHHhcCcc
Confidence 5799999999999999999999999999999976433221 222 12233566777765
No 352
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=91.32 E-value=0.18 Score=50.31 Aligned_cols=34 Identities=32% Similarity=0.369 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
.-.|+|+|+|.+|+.+|..+...|.+|+++|+++
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999874
No 353
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=91.23 E-value=0.22 Score=48.21 Aligned_cols=32 Identities=34% Similarity=0.437 Sum_probs=30.4
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCC-eEEEEecC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGR-RVHVIERD 92 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~-~V~l~Er~ 92 (526)
..|.|||+|..|.++|..|++.|+ +|+++|++
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 479999999999999999999999 99999987
No 354
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=91.21 E-value=0.17 Score=50.86 Aligned_cols=33 Identities=36% Similarity=0.473 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
-.|+|+|+|.+|+.+|..|...|.+|+++|+++
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 579999999999999999999999999999874
No 355
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=91.20 E-value=0.23 Score=48.25 Aligned_cols=33 Identities=18% Similarity=0.328 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCC-eEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~-~V~l~Er~~ 93 (526)
..|.|||+|..|.++|..|+..|+ +++++|.+.
T Consensus 8 ~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 8 NKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 579999999999999999999999 999999975
No 356
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=91.19 E-value=0.18 Score=48.02 Aligned_cols=34 Identities=29% Similarity=0.488 Sum_probs=31.3
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~ 94 (526)
..|.|||.|..|...|..|++.|++|++++|++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 3699999999999999999999999999999853
No 357
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=91.15 E-value=0.17 Score=51.88 Aligned_cols=33 Identities=33% Similarity=0.466 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
..|.|||+|..|...|..|++.|++|+++|+++
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 369999999999999999999999999999874
No 358
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=91.07 E-value=0.23 Score=46.11 Aligned_cols=35 Identities=31% Similarity=0.509 Sum_probs=32.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~ 94 (526)
...|.|||+|-.|.++|..|++.|++|++++|++.
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~ 53 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPK 53 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 46799999999999999999999999999999853
No 359
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=91.02 E-value=0.22 Score=48.12 Aligned_cols=32 Identities=31% Similarity=0.454 Sum_probs=29.4
Q ss_pred cEEEECCCHHHHHHHHHHHhC--CCeEEEEecCC
Q 009785 62 DVIVVGAGVAGAALANTLAKD--GRRVHVIERDL 93 (526)
Q Consensus 62 dVvIVGaG~aGl~~A~~La~~--G~~V~l~Er~~ 93 (526)
.|.|||+|-.|.++|..|++. |.+|+++|+++
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 589999999999999999985 78999999984
No 360
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=90.88 E-value=0.24 Score=47.79 Aligned_cols=33 Identities=21% Similarity=0.345 Sum_probs=30.3
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCC-eEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~-~V~l~Er~~ 93 (526)
..|.|||||-.|..+|..|+..|+ +|+++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 479999999999999999999997 999999874
No 361
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=90.87 E-value=0.22 Score=47.81 Aligned_cols=33 Identities=21% Similarity=0.230 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
..|.|||.|-.|...|..|++.|++|++++|++
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 579999999999999999999999999999874
No 362
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=90.86 E-value=0.21 Score=48.41 Aligned_cols=32 Identities=31% Similarity=0.529 Sum_probs=29.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERD 92 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~ 92 (526)
..+|.|||+|-.|.+.|..|++.|.+|+++ ++
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 467999999999999999999999999999 66
No 363
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=90.78 E-value=1.1 Score=46.26 Aligned_cols=34 Identities=29% Similarity=0.486 Sum_probs=29.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhC--CCeEEEEecCCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKD--GRRVHVIERDLS 94 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~--G~~V~l~Er~~~ 94 (526)
.+|+|||+|-+|.-.+..|+++ +.+|+++=|.+.
T Consensus 247 KrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~~ 282 (501)
T 4b63_A 247 YNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDSA 282 (501)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSSS
T ss_pred cEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCCc
Confidence 3699999999999999999875 689999998853
No 364
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=90.73 E-value=0.23 Score=47.46 Aligned_cols=33 Identities=27% Similarity=0.431 Sum_probs=30.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
+..|.|||+|..|...|..|+ .|++|+++|+++
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 457999999999999999999 999999999984
No 365
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=90.60 E-value=0.24 Score=51.03 Aligned_cols=35 Identities=23% Similarity=0.430 Sum_probs=32.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~ 94 (526)
.-+|+|||+|+.|+-+|..|++.|.+|+++|+.+.
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~ 225 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDL 225 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCc
Confidence 35799999999999999999999999999999864
No 366
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=90.59 E-value=0.19 Score=51.17 Aligned_cols=32 Identities=25% Similarity=0.389 Sum_probs=30.2
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 62 DVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 62 dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
.|.|||+|-.|+.+|..|++.|++|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 58999999999999999999999999999874
No 367
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=90.58 E-value=0.29 Score=47.44 Aligned_cols=33 Identities=24% Similarity=0.300 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCC-eEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~-~V~l~Er~~ 93 (526)
..|.|||+|..|.++|..|+..|+ +++++|.++
T Consensus 6 ~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 6 KKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 579999999999999999999998 999999985
No 368
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=90.51 E-value=0.22 Score=49.17 Aligned_cols=33 Identities=27% Similarity=0.580 Sum_probs=31.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCC-eEEEEecC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGR-RVHVIERD 92 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~-~V~l~Er~ 92 (526)
+..|+|+|||.+|..+|..|...|. +|.++|++
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~ 221 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKF 221 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred ccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECC
Confidence 4689999999999999999999999 99999997
No 369
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=90.47 E-value=0.29 Score=44.38 Aligned_cols=33 Identities=30% Similarity=0.366 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
..|.|||+|-.|...|..|++.|++|.+++|++
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999999874
No 370
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=90.45 E-value=0.13 Score=46.95 Aligned_cols=33 Identities=24% Similarity=0.360 Sum_probs=30.5
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEE-EecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHV-IERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l-~Er~~ 93 (526)
..|.|||+|-.|.+.|..|++.|++|++ ++|++
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 5799999999999999999999999998 88874
No 371
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=90.41 E-value=0.28 Score=47.57 Aligned_cols=34 Identities=29% Similarity=0.377 Sum_probs=30.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCC--eEEEEecCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGR--RVHVIERDL 93 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~--~V~l~Er~~ 93 (526)
...|.|||+|-+|.++|+.|+..|. .++++|.+.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 3689999999999999999999998 899999874
No 372
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=90.23 E-value=0.32 Score=47.00 Aligned_cols=33 Identities=27% Similarity=0.459 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
..|.|||+|..|...|..|++.|++|++++|++
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 579999999999999999999999999999874
No 373
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=90.20 E-value=0.3 Score=45.92 Aligned_cols=35 Identities=34% Similarity=0.517 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~ 94 (526)
.-.|+|+|+|-+|.++|..|++.|.+|+|+.|..+
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ 152 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSR 152 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 35799999999999999999999999999999853
No 374
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=90.14 E-value=0.23 Score=47.49 Aligned_cols=33 Identities=27% Similarity=0.476 Sum_probs=30.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
..|.|||+|..|...|..|++.|++|.++++++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 479999999999999999999999999999874
No 375
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=90.13 E-value=0.27 Score=48.71 Aligned_cols=33 Identities=24% Similarity=0.480 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
..|+|+|+|..|+.+|..|+..|.+|+++++++
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 479999999999999999999999999999873
No 376
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=90.13 E-value=0.37 Score=46.36 Aligned_cols=34 Identities=38% Similarity=0.643 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
...|.|||.|..|...|..|++.|++|++++|++
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999884
No 377
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=90.06 E-value=0.25 Score=47.28 Aligned_cols=34 Identities=24% Similarity=0.324 Sum_probs=31.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
...|.|||+|-.|...|..|++.|++|++++|++
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3579999999999999999999999999999874
No 378
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=90.04 E-value=0.11 Score=47.73 Aligned_cols=34 Identities=12% Similarity=0.089 Sum_probs=30.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~ 94 (526)
+..|+|+|+|..|..+|..|.+.|+ |+++|+++.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~ 42 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENV 42 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGG
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHH
Confidence 3479999999999999999999999 999999853
No 379
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=90.00 E-value=0.27 Score=47.65 Aligned_cols=34 Identities=24% Similarity=0.438 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
...|.|||.|..|...|..|++.|++|++++|++
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 3579999999999999999999999999999884
No 380
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=89.87 E-value=0.22 Score=48.46 Aligned_cols=30 Identities=33% Similarity=0.547 Sum_probs=28.9
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCeEEEEec
Q 009785 62 DVIVVGAGVAGAALANTLAKDGRRVHVIER 91 (526)
Q Consensus 62 dVvIVGaG~aGl~~A~~La~~G~~V~l~Er 91 (526)
.|.|||+|..|.+.|..|++.|++|++++|
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 589999999999999999999999999998
No 381
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=89.86 E-value=0.3 Score=47.45 Aligned_cols=34 Identities=26% Similarity=0.400 Sum_probs=31.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCC----CeEEEEecCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDG----RRVHVIERDL 93 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G----~~V~l~Er~~ 93 (526)
...|.|||+|-.|.+.|..|.+.| .+|++++|++
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 457999999999999999999999 7999999874
No 382
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=89.83 E-value=0.31 Score=46.02 Aligned_cols=33 Identities=21% Similarity=0.317 Sum_probs=30.5
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
-.|+|+|+|.+|.++|..|++.|.+|+++.|+.
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 469999999999999999999999999998873
No 383
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=89.71 E-value=0.39 Score=47.35 Aligned_cols=36 Identities=19% Similarity=0.291 Sum_probs=32.4
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCC
Q 009785 62 DVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPD 97 (526)
Q Consensus 62 dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~ 97 (526)
.|+|+|||..|..+|..+++.|++|+++|.++..+.
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~~~~ 38 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQALI 38 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTCTT
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCChh
Confidence 499999999999999999999999999998875443
No 384
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=89.69 E-value=0.22 Score=49.22 Aligned_cols=32 Identities=38% Similarity=0.488 Sum_probs=30.3
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 62 DVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 62 dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
.|.|||+|..|.+.|..|++.|++|++++|++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 79999999999999999999999999999873
No 385
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=89.64 E-value=0.26 Score=46.95 Aligned_cols=34 Identities=26% Similarity=0.423 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCC-eEEEEecCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~-~V~l~Er~~ 93 (526)
+..|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 4689999999999999999999997 799999884
No 386
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=89.62 E-value=0.29 Score=50.33 Aligned_cols=33 Identities=30% Similarity=0.513 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
..|.|||+|..|...|..|++.|++|+++|+++
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 369999999999999999999999999999884
No 387
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=89.62 E-value=0.34 Score=47.14 Aligned_cols=35 Identities=20% Similarity=0.457 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCC-eEEEEecCCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGR-RVHVIERDLS 94 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~-~V~l~Er~~~ 94 (526)
+..|+|||+|-.|..+|..|++.|+ +++|+|.+.-
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~V 69 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTV 69 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEe
Confidence 3579999999999999999999997 6899998853
No 388
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=89.60 E-value=0.3 Score=47.43 Aligned_cols=32 Identities=31% Similarity=0.540 Sum_probs=29.8
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCC--eEEEEecC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGR--RVHVIERD 92 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~--~V~l~Er~ 92 (526)
..|.|||+|..|.++|..|+..|+ +++++|.+
T Consensus 6 ~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 6 NKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 579999999999999999999997 89999986
No 389
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=89.58 E-value=0.35 Score=43.50 Aligned_cols=32 Identities=34% Similarity=0.398 Sum_probs=29.9
Q ss_pred cEEEEC-CCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 62 DVIVVG-AGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 62 dVvIVG-aG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
.|+|+| +|-.|...|..|++.|++|.+++|++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 589999 99999999999999999999999874
No 390
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=89.57 E-value=0.31 Score=50.20 Aligned_cols=35 Identities=29% Similarity=0.391 Sum_probs=31.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 59 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
++.+|.|||+|..|.++|..|++.|++|++++|++
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 35689999999999999999999999999999874
No 391
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=89.46 E-value=0.3 Score=48.16 Aligned_cols=33 Identities=30% Similarity=0.488 Sum_probs=30.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCC-eEEEEecC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGR-RVHVIERD 92 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~-~V~l~Er~ 92 (526)
+..|+|+|||-+|..+|..|...|. +|+++||.
T Consensus 192 ~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 192 EVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 4689999999999999999999998 89999997
No 392
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=89.39 E-value=0.34 Score=46.95 Aligned_cols=34 Identities=18% Similarity=0.340 Sum_probs=31.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhCC-CeEEEEecCCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDG-RRVHVIERDLS 94 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G-~~V~l~Er~~~ 94 (526)
..|.|||.|-.|..+|..|++.| ++|+++++++.
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~ 59 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFN 59 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 47999999999999999999999 99999999853
No 393
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=89.38 E-value=0.34 Score=48.18 Aligned_cols=33 Identities=39% Similarity=0.585 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
-.|+|+|+|..|+.+|..++..|.+|+++++++
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 579999999999999999999999999999873
No 394
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=89.36 E-value=0.21 Score=47.64 Aligned_cols=32 Identities=28% Similarity=0.452 Sum_probs=30.4
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 62 DVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 62 dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
.|.|||.|..|...|..|++.|++|++++|++
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 69999999999999999999999999999985
No 395
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=89.27 E-value=0.37 Score=49.76 Aligned_cols=34 Identities=29% Similarity=0.338 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
...|.|||.|..|..+|..|+++|++|++++|++
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999985
No 396
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=89.24 E-value=0.29 Score=46.81 Aligned_cols=32 Identities=22% Similarity=0.215 Sum_probs=29.8
Q ss_pred cEEEECCCHHHHHHHHHHHhCCC--eEEEEecCC
Q 009785 62 DVIVVGAGVAGAALANTLAKDGR--RVHVIERDL 93 (526)
Q Consensus 62 dVvIVGaG~aGl~~A~~La~~G~--~V~l~Er~~ 93 (526)
.|.|||+|..|.++|..|++.|. +++++|+++
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 59999999999999999999998 899999874
No 397
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=89.24 E-value=0.26 Score=50.62 Aligned_cols=33 Identities=24% Similarity=0.418 Sum_probs=30.6
Q ss_pred CcEEEECCCHHHHHHHHHHHhC--CCeEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKD--GRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~--G~~V~l~Er~~ 93 (526)
..|.|||+|-.|+.+|..|++. |++|+++++++
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 4799999999999999999998 89999999874
No 398
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=89.18 E-value=0.29 Score=47.49 Aligned_cols=32 Identities=28% Similarity=0.392 Sum_probs=29.8
Q ss_pred cEEEECCCHHHHHHHHHHHhCCC--eEEEEecCC
Q 009785 62 DVIVVGAGVAGAALANTLAKDGR--RVHVIERDL 93 (526)
Q Consensus 62 dVvIVGaG~aGl~~A~~La~~G~--~V~l~Er~~ 93 (526)
.|.|||+|-.|.++|..|++.|+ +|+++|+++
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 58999999999999999999999 999999873
No 399
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=89.15 E-value=0.36 Score=48.86 Aligned_cols=34 Identities=29% Similarity=0.279 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
...|.|||.|-+||.+|..|++.|++|+.+|-++
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 3579999999999999999999999999999874
No 400
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=89.15 E-value=0.34 Score=45.29 Aligned_cols=34 Identities=21% Similarity=0.282 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHHhCC----CeEEEEecCCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDG----RRVHVIERDLS 94 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G----~~V~l~Er~~~ 94 (526)
..|.|||+|-.|.+.|..|++.| .+|.+++|++.
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 47999999999999999999999 69999999864
No 401
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=89.12 E-value=0.37 Score=45.51 Aligned_cols=32 Identities=34% Similarity=0.528 Sum_probs=29.8
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 62 DVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 62 dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
.|.|||+|..|.+.|..|.+.|++|+++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 58999999999999999999999999998873
No 402
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=89.05 E-value=0.34 Score=45.18 Aligned_cols=33 Identities=27% Similarity=0.395 Sum_probs=30.5
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCC-eEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~-~V~l~Er~~ 93 (526)
..|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 29 ~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 29 SQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred CcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 579999999999999999999998 789999884
No 403
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=89.03 E-value=0.29 Score=49.12 Aligned_cols=31 Identities=23% Similarity=0.357 Sum_probs=29.1
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 62 DVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 62 dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
.|.|||+|-.|+.+|..|++ |++|+++++++
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 58999999999999999999 99999999874
No 404
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=88.92 E-value=0.37 Score=46.20 Aligned_cols=33 Identities=21% Similarity=0.436 Sum_probs=30.4
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCC-eEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~-~V~l~Er~~ 93 (526)
..|+|+|+|.+|.++|..|++.|. +|+|+.|+.
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 469999999999999999999998 999999873
No 405
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=88.83 E-value=0.43 Score=49.03 Aligned_cols=34 Identities=29% Similarity=0.465 Sum_probs=31.8
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~ 94 (526)
.+|.|||.|..|..+|..|+++|++|++++|++.
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~ 38 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVS 38 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTH
T ss_pred CEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 5799999999999999999999999999999853
No 406
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=88.70 E-value=0.41 Score=45.87 Aligned_cols=33 Identities=24% Similarity=0.521 Sum_probs=30.7
Q ss_pred CcEEEEC-CCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVG-AGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVG-aG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
..|.||| +|-.|.+.|..|++.|++|.++++++
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 3699999 99999999999999999999999874
No 407
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=88.67 E-value=0.14 Score=47.13 Aligned_cols=31 Identities=23% Similarity=0.296 Sum_probs=29.6
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEec
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIER 91 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er 91 (526)
..|.|||+|..|.++|..|++.|++|+++++
T Consensus 7 mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 7 LRVGIFDDGSSTVNMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CEEEEECCSCCCSCHHHHHHHTTCEEEECSS
T ss_pred cEEEEEeeCHHHHHHHHHHHHCCCEEEEecC
Confidence 5799999999999999999999999999988
No 408
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=88.64 E-value=0.37 Score=46.67 Aligned_cols=34 Identities=24% Similarity=0.446 Sum_probs=30.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCC--eEEEEecC
Q 009785 59 FDADVIVVGAGVAGAALANTLAKDGR--RVHVIERD 92 (526)
Q Consensus 59 ~~~dVvIVGaG~aGl~~A~~La~~G~--~V~l~Er~ 92 (526)
++..|.|||||-+|.++|+.|+..+. .+.|+|.+
T Consensus 4 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~ 39 (318)
T 1ez4_A 4 NHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVV 39 (318)
T ss_dssp TBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 34689999999999999999999886 79999986
No 409
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=88.64 E-value=0.37 Score=46.56 Aligned_cols=32 Identities=31% Similarity=0.487 Sum_probs=29.7
Q ss_pred cEEEECCCHHHHHHHHHHHhCCC--eEEEEecCC
Q 009785 62 DVIVVGAGVAGAALANTLAKDGR--RVHVIERDL 93 (526)
Q Consensus 62 dVvIVGaG~aGl~~A~~La~~G~--~V~l~Er~~ 93 (526)
.|.|||+|..|.++|..|++.|+ +++++|.++
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 58999999999999999999987 899999975
No 410
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=88.58 E-value=0.46 Score=45.90 Aligned_cols=33 Identities=24% Similarity=0.527 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCC--eEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGR--RVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~--~V~l~Er~~ 93 (526)
..|.|||.|..|.+.|..|++.|+ +|+++++++
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 579999999999999999999999 999999874
No 411
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=88.57 E-value=0.38 Score=46.66 Aligned_cols=32 Identities=25% Similarity=0.484 Sum_probs=29.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCC--eEEEEecC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGR--RVHVIERD 92 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~--~V~l~Er~ 92 (526)
..|.|||+|..|.++|..|+..|+ +++++|.+
T Consensus 10 ~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 10 QKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 579999999999999999999987 89999986
No 412
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=88.56 E-value=0.4 Score=48.93 Aligned_cols=33 Identities=36% Similarity=0.431 Sum_probs=30.6
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
-.|+|+|+|..|..+|..|+..|.+|+++|+++
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 469999999999999999999999999999873
No 413
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=88.55 E-value=0.27 Score=47.39 Aligned_cols=31 Identities=32% Similarity=0.398 Sum_probs=29.2
Q ss_pred CcEEEECCCHHHHHHHHHHHhC-----C-CeEEEEec
Q 009785 61 ADVIVVGAGVAGAALANTLAKD-----G-RRVHVIER 91 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~-----G-~~V~l~Er 91 (526)
.+|.|||+|..|.+.|..|++. | .+|++++|
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 4799999999999999999999 9 99999987
No 414
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=88.49 E-value=0.36 Score=46.23 Aligned_cols=33 Identities=27% Similarity=0.430 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
..|.|||+|..|...|..|++.|++|++++|++
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 469999999999999999999999999999874
No 415
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=88.48 E-value=2.6 Score=42.48 Aligned_cols=53 Identities=15% Similarity=0.129 Sum_probs=38.1
Q ss_pred HHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEEcCeEEEeecCCc
Q 009785 165 VQRLREKAASLPNVRLEQGT-VTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFS 223 (526)
Q Consensus 165 ~~~L~~~a~~~~~v~i~~~~-v~~l~~~~~~v~gv~v~~~~G~~~~i~a~~vV~ADG~~S 223 (526)
.+.+.+.+++. +|+++.++ |++++. + .+.+.+.+|+..++.+|++|.|.|...
T Consensus 203 ~~~l~~~l~~~-GV~~~~~~~v~~v~~--~---~~~~~~~~g~~~~i~~d~vi~~~G~~~ 256 (430)
T 3hyw_A 203 KRLVEDLFAER-NIDWIANVAVKAIEP--D---KVIYEDLNGNTHEVPAKFTMFMPSFQG 256 (430)
T ss_dssp HHHHHHHHHHT-TCEEECSCEEEEECS--S---EEEEECTTSCEEEEECSEEEEECEEEC
T ss_pred HHHHHHHHHhC-CeEEEeCceEEEEeC--C---ceEEEeeCCCceEeecceEEEeccCCC
Confidence 34455555555 89999885 888753 3 355677778777899999999999543
No 416
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=88.34 E-value=0.56 Score=44.26 Aligned_cols=34 Identities=26% Similarity=0.512 Sum_probs=31.5
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~ 94 (526)
..|+|.|+|-.|..++..|.++|++|+++.|+..
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 4699999999999999999999999999999854
No 417
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=88.22 E-value=0.53 Score=44.62 Aligned_cols=33 Identities=24% Similarity=0.488 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCC---eEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGR---RVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~---~V~l~Er~~ 93 (526)
..|.|||+|-.|.+.|..|.+.|+ +|.+++|++
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 579999999999999999999999 999999985
No 418
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=88.18 E-value=0.39 Score=46.16 Aligned_cols=33 Identities=24% Similarity=0.410 Sum_probs=30.0
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCC--eEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGR--RVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~--~V~l~Er~~ 93 (526)
..|.|||||..|...|+.|+..|+ .++|+|.+.
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 579999999999999999999998 999999975
No 419
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=88.17 E-value=0.47 Score=48.90 Aligned_cols=33 Identities=27% Similarity=0.457 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
.+|.|||+|..|..+|..|++.|++|.+++|++
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 479999999999999999999999999999874
No 420
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=87.99 E-value=0.4 Score=44.80 Aligned_cols=32 Identities=34% Similarity=0.540 Sum_probs=29.8
Q ss_pred cEEEECCCHHHHHHHHHHHhCC-CeEEEEecCC
Q 009785 62 DVIVVGAGVAGAALANTLAKDG-RRVHVIERDL 93 (526)
Q Consensus 62 dVvIVGaG~aGl~~A~~La~~G-~~V~l~Er~~ 93 (526)
.|.|||+|-.|.+.|..|++.| .+|.+++|++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 5899999999999999999999 9999999873
No 421
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=87.95 E-value=0.45 Score=46.19 Aligned_cols=33 Identities=21% Similarity=0.231 Sum_probs=30.3
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCC--eEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGR--RVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~--~V~l~Er~~ 93 (526)
..|.|||+|..|.++|..|+..|+ .++++|.+.
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMKDLADEVALVDVME 56 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH
Confidence 579999999999999999999997 899999863
No 422
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=87.93 E-value=0.26 Score=48.45 Aligned_cols=34 Identities=26% Similarity=0.382 Sum_probs=31.2
Q ss_pred CcEEEECCCHHHHHHHHHHHhCC-------CeEEEEecCCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDG-------RRVHVIERDLS 94 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G-------~~V~l~Er~~~ 94 (526)
..|.|||+|-.|.+.|..|++.| .+|++++|++.
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 47999999999999999999999 89999999854
No 423
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=87.92 E-value=0.44 Score=45.37 Aligned_cols=32 Identities=25% Similarity=0.317 Sum_probs=30.0
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 62 DVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 62 dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
.|.|||+|-.|...|..|++.|++|++++|++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 58999999999999999999999999999874
No 424
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=87.91 E-value=0.59 Score=43.55 Aligned_cols=32 Identities=38% Similarity=0.549 Sum_probs=30.3
Q ss_pred cEEEECCCHHHHHHHHHHHhCCC-eEEEEecCC
Q 009785 62 DVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (526)
Q Consensus 62 dVvIVGaG~aGl~~A~~La~~G~-~V~l~Er~~ 93 (526)
.|+|+|+|-+|.+++..|.+.|. +|+|+.|+.
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 79999999999999999999998 899999974
No 425
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=87.84 E-value=0.58 Score=45.70 Aligned_cols=33 Identities=24% Similarity=0.372 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
..|.|||.|..|.+.|..|++.|++|.++++++
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999999874
No 426
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=87.82 E-value=0.49 Score=45.75 Aligned_cols=33 Identities=33% Similarity=0.572 Sum_probs=29.8
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCC--eEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGR--RVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~--~V~l~Er~~ 93 (526)
..|.|||+|..|.++|+.|+..|. .++++|.+.
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 579999999999999999998885 799999873
No 427
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=87.79 E-value=0.38 Score=45.47 Aligned_cols=33 Identities=21% Similarity=0.377 Sum_probs=30.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
-.|+|+|+|-+|.++|..|++.|.+|+|+.|+.
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 469999999999999999999999999999883
No 428
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=87.72 E-value=0.46 Score=44.82 Aligned_cols=33 Identities=24% Similarity=0.408 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
..|+|.|||-.|..++..|.++|++|+++.|++
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 479999999999999999999999999999874
No 429
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=87.71 E-value=0.4 Score=46.17 Aligned_cols=32 Identities=28% Similarity=0.450 Sum_probs=29.7
Q ss_pred cEEEECCCHHHHHHHHHHHhCC--CeEEEEecCC
Q 009785 62 DVIVVGAGVAGAALANTLAKDG--RRVHVIERDL 93 (526)
Q Consensus 62 dVvIVGaG~aGl~~A~~La~~G--~~V~l~Er~~ 93 (526)
.|.|||+|-.|.++|..|++.| .+|+++|++.
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 6999999999999999999999 6899999873
No 430
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=87.71 E-value=0.41 Score=46.22 Aligned_cols=33 Identities=21% Similarity=0.314 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCC-eEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~-~V~l~Er~~ 93 (526)
..|.|||.|..|...|..|++.|+ +|++++|++
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~ 58 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQAGAIDMAAYDAAS 58 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSC
T ss_pred CEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCC
Confidence 579999999999999999999999 999999973
No 431
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=87.70 E-value=0.92 Score=47.69 Aligned_cols=59 Identities=12% Similarity=0.129 Sum_probs=41.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCC----c--ccceeeCcchHHHHHHcCCc
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEPD----R--IVGELLQPGGYLKLIELGLE 118 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~~----~--~~g~~l~~~~~~~l~~lGl~ 118 (526)
+-.|+|+|.|..|..+|..|.+.|++|+++|+++..-. . .....-.+...+.|+++|+.
T Consensus 127 ~~hviI~G~g~~g~~la~~L~~~~~~vvvid~~~~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~ 191 (565)
T 4gx0_A 127 RGHILIFGIDPITRTLIRKLESRNHLFVVVTDNYDQALHLEEQEGFKVVYGSPTDAHVLAGLRVA 191 (565)
T ss_dssp CSCEEEESCCHHHHHHHHHTTTTTCCEEEEESCHHHHHHHHHSCSSEEEESCTTCHHHHHHTTGG
T ss_pred CCeEEEECCChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCCeEEEeCCCCHHHHHhcCcc
Confidence 35799999999999999999999999999999853210 0 00111133445667777765
No 432
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=87.69 E-value=0.38 Score=45.54 Aligned_cols=33 Identities=36% Similarity=0.500 Sum_probs=30.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCC-eEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~-~V~l~Er~~ 93 (526)
-.|+|+|+|-+|.++|..|++.|. +|+|+.|+.
T Consensus 118 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 118 AYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 479999999999999999999998 899999885
No 433
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=87.60 E-value=0.5 Score=44.63 Aligned_cols=32 Identities=25% Similarity=0.545 Sum_probs=29.6
Q ss_pred cEEEECCCHHHHHHHHHHHhCCC--eEEEEecCC
Q 009785 62 DVIVVGAGVAGAALANTLAKDGR--RVHVIERDL 93 (526)
Q Consensus 62 dVvIVGaG~aGl~~A~~La~~G~--~V~l~Er~~ 93 (526)
.|.|||+|..|.+.|..|++.|+ +|+++++++
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 59999999999999999999998 899999873
No 434
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=87.59 E-value=0.47 Score=45.91 Aligned_cols=33 Identities=24% Similarity=0.513 Sum_probs=29.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCC--eEEEEecC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGR--RVHVIERD 92 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~--~V~l~Er~ 92 (526)
...|.|||||-+|.++|..|+..|. .+.++|.+
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 3689999999999999999999885 89999976
No 435
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=87.58 E-value=0.44 Score=51.68 Aligned_cols=32 Identities=25% Similarity=0.416 Sum_probs=30.7
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 62 DVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 62 dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
.|.|||+|..|...|..|++.|++|+++|+++
T Consensus 314 kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 314 KVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred EEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 69999999999999999999999999999985
No 436
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=87.58 E-value=0.41 Score=46.51 Aligned_cols=33 Identities=18% Similarity=0.321 Sum_probs=29.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
.-+|+|||+|..|+-+|..|++.| +|+++++..
T Consensus 163 ~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 163 GMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 357999999999999999999999 799999874
No 437
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=87.51 E-value=0.45 Score=46.76 Aligned_cols=34 Identities=29% Similarity=0.551 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCC-eEEEEecCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~-~V~l~Er~~ 93 (526)
...|+|||+|..|..+|..|++.|+ +++|+|.+.
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 4689999999999999999999998 799999884
No 438
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=87.45 E-value=0.63 Score=41.79 Aligned_cols=32 Identities=28% Similarity=0.504 Sum_probs=29.8
Q ss_pred cEEEECC-CHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 62 DVIVVGA-GVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 62 dVvIVGa-G~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
.|+|.|| |-.|..++..|.++|++|+++.|++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 4999996 9999999999999999999999984
No 439
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=87.42 E-value=0.36 Score=47.90 Aligned_cols=33 Identities=18% Similarity=0.351 Sum_probs=30.8
Q ss_pred cEEEECCCHHHHHHHHHHHhCC-------CeEEEEecCCC
Q 009785 62 DVIVVGAGVAGAALANTLAKDG-------RRVHVIERDLS 94 (526)
Q Consensus 62 dVvIVGaG~aGl~~A~~La~~G-------~~V~l~Er~~~ 94 (526)
.|.|||+|-.|.+.|..|++.| .+|++++|++.
T Consensus 23 kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 23 KISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp CEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred EEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 6999999999999999999999 99999999854
No 440
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=87.38 E-value=0.4 Score=45.97 Aligned_cols=33 Identities=27% Similarity=0.437 Sum_probs=27.4
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC
Q 009785 62 DVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (526)
Q Consensus 62 dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~ 94 (526)
.|-+||-|..|...|..|.+.|++|++++|+++
T Consensus 7 kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~ 39 (297)
T 4gbj_A 7 KIAFLGLGNLGTPIAEILLEAGYELVVWNRTAS 39 (297)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEC-----
T ss_pred cEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 699999999999999999999999999999864
No 441
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=87.36 E-value=0.56 Score=42.85 Aligned_cols=34 Identities=29% Similarity=0.402 Sum_probs=31.3
Q ss_pred CCcEEEECC-CHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 60 DADVIVVGA-GVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 60 ~~dVvIVGa-G~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
...|+|.|| |-.|..++..|.++|++|+++.|++
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 357999998 9999999999999999999999985
No 442
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=87.34 E-value=0.5 Score=48.28 Aligned_cols=32 Identities=28% Similarity=0.395 Sum_probs=30.3
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERD 92 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~ 92 (526)
..|+|||||.+|...+..|.+.|.+|+|++.+
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 47999999999999999999999999999976
No 443
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=87.33 E-value=1.1 Score=44.37 Aligned_cols=37 Identities=27% Similarity=0.449 Sum_probs=32.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEP 96 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~ 96 (526)
...|+|+|+|..|..++..+.+.|++|++++..+..+
T Consensus 12 ~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~~p 48 (377)
T 3orq_A 12 GATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSEDCP 48 (377)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCh
Confidence 3579999999999999999999999999999876544
No 444
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=87.24 E-value=0.78 Score=49.70 Aligned_cols=34 Identities=32% Similarity=0.453 Sum_probs=31.4
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~ 94 (526)
-.|.|||||..|...|..+++.|++|+++|.+++
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~ 350 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISVVAVESDPK 350 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHH
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCchhcccchHh
Confidence 3699999999999999999999999999998853
No 445
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=87.13 E-value=0.55 Score=48.30 Aligned_cols=33 Identities=48% Similarity=0.633 Sum_probs=30.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
.+|.|||+|..|..+|..|++.|++|++++|++
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 369999999999999999999999999999874
No 446
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=87.13 E-value=0.6 Score=45.01 Aligned_cols=33 Identities=27% Similarity=0.413 Sum_probs=30.4
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCC-eEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~-~V~l~Er~~ 93 (526)
-.|+|+|+|-+|.++|..|++.|. +|+|+.|+.
T Consensus 155 k~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~ 188 (315)
T 3tnl_A 155 KKMTICGAGGAATAICIQAALDGVKEISIFNRKD 188 (315)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS
T ss_pred CEEEEECCChHHHHHHHHHHHCCCCEEEEEECCC
Confidence 479999999999999999999998 899999883
No 447
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=87.04 E-value=0.67 Score=42.89 Aligned_cols=33 Identities=12% Similarity=0.264 Sum_probs=30.6
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCC----eEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGR----RVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~----~V~l~Er~~ 93 (526)
..|.|||+|-.|.+.|..|.+.|+ +|.+++|++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 469999999999999999999998 999999874
No 448
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=87.04 E-value=0.49 Score=44.82 Aligned_cols=31 Identities=29% Similarity=0.421 Sum_probs=29.0
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 62 DVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 62 dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
.|.|||+|..|...|..|++ |++|++++|++
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 59999999999999999999 99999999874
No 449
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=87.00 E-value=0.61 Score=44.50 Aligned_cols=33 Identities=36% Similarity=0.516 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
..|.|||+|..|..+|..|...|.+|++++|..
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 469999999999999999999999999999874
No 450
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=86.98 E-value=0.59 Score=44.37 Aligned_cols=33 Identities=24% Similarity=0.414 Sum_probs=30.6
Q ss_pred CcEEEECC-CHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVGA-GVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGa-G~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
..|.|||+ |-.|...|..|++.|++|++++|++
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 37999999 9999999999999999999999873
No 451
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=86.94 E-value=0.68 Score=45.99 Aligned_cols=36 Identities=31% Similarity=0.163 Sum_probs=33.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC
Q 009785 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (526)
Q Consensus 59 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~ 94 (526)
....++|+|||..|.++|..++..|++|+|+|.++.
T Consensus 203 P~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~ 238 (386)
T 2we8_A 203 PRPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPV 238 (386)
T ss_dssp CCCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchh
Confidence 357899999999999999999999999999998865
No 452
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=86.88 E-value=0.76 Score=44.65 Aligned_cols=33 Identities=21% Similarity=0.341 Sum_probs=30.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCC--eEEEEecC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGR--RVHVIERD 92 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~--~V~l~Er~ 92 (526)
...|.|||+|-.|.++|+.|+..|. .++|+|.+
T Consensus 19 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 19 QNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 3579999999999999999999997 89999986
No 453
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=86.88 E-value=0.7 Score=45.12 Aligned_cols=33 Identities=33% Similarity=0.355 Sum_probs=30.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
..|.|||+|..|.+.|..|++.|++|+++++++
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 469999999999999999999999999999874
No 454
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=86.87 E-value=0.86 Score=42.52 Aligned_cols=33 Identities=24% Similarity=0.267 Sum_probs=29.7
Q ss_pred CcEEEECC-C-HHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVGA-G-VAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGa-G-~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
-.|+|.|| | -.|..+|..|+++|.+|++++|+.
T Consensus 23 k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~ 57 (266)
T 3o38_A 23 KVVLVTAAAGTGIGSTTARRALLEGADVVISDYHE 57 (266)
T ss_dssp CEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCH
Confidence 46999999 7 599999999999999999999873
No 455
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=86.85 E-value=0.49 Score=44.75 Aligned_cols=33 Identities=33% Similarity=0.544 Sum_probs=30.6
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
..|+|||+|.+|.+.|..|.+.|.+|++++|+.
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 479999999999999999999999999999873
No 456
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=86.83 E-value=1.2 Score=45.93 Aligned_cols=35 Identities=23% Similarity=0.276 Sum_probs=33.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 59 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
.++|++|||+|++|+++|..|++.|.+|+|+|+..
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~ 38 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQ 38 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 36899999999999999999999999999999986
No 457
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=86.79 E-value=0.65 Score=47.69 Aligned_cols=33 Identities=33% Similarity=0.419 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
.+|.|||+|..|...|..|++.|++|.+++|++
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 38 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRTT 38 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 579999999999999999999999999999874
No 458
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=86.79 E-value=0.69 Score=41.68 Aligned_cols=32 Identities=34% Similarity=0.570 Sum_probs=29.9
Q ss_pred cEEEECC-CHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 62 DVIVVGA-GVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 62 dVvIVGa-G~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
.|+|.|| |-.|..++..|.++|++|+++.|++
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 4999998 9999999999999999999999974
No 459
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=86.78 E-value=0.51 Score=47.30 Aligned_cols=34 Identities=32% Similarity=0.369 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
.-.|+|+|.|..|..+|..|...|.+|+++|+++
T Consensus 220 GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 220 GKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 3579999999999999999999999999999874
No 460
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=86.62 E-value=0.74 Score=44.08 Aligned_cols=33 Identities=36% Similarity=0.478 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
..|.|||+|..|..+|..|...|.+|++++|..
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 479999999999999999999999999999874
No 461
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=86.58 E-value=0.74 Score=43.68 Aligned_cols=33 Identities=36% Similarity=0.551 Sum_probs=30.1
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCC-eEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~-~V~l~Er~~ 93 (526)
-.|+|+|+|-+|.+++..|++.|. +|+|+.|+.
T Consensus 128 k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 128 DSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 479999999999999999999998 699998873
No 462
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=86.55 E-value=0.63 Score=48.74 Aligned_cols=35 Identities=20% Similarity=0.457 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCC-eEEEEecCCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGR-RVHVIERDLS 94 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~-~V~l~Er~~~ 94 (526)
+..|+|||+|-.|..+|..|++.|+ +++|+|.+.-
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~V 361 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTV 361 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCC
Confidence 4679999999999999999999998 7899998853
No 463
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=86.49 E-value=0.46 Score=48.92 Aligned_cols=33 Identities=27% Similarity=0.462 Sum_probs=30.4
Q ss_pred CcEEEECCCHHHHHHHHHHHhC--CCeEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKD--GRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~--G~~V~l~Er~~ 93 (526)
..|.|||+|-.|+.+|..|++. |++|+++|+++
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 4799999999999999999998 79999999874
No 464
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=86.49 E-value=0.4 Score=48.07 Aligned_cols=31 Identities=32% Similarity=0.449 Sum_probs=28.4
Q ss_pred CcEEEECCCHHHHHHHHHHHh-CCCeEEEEec
Q 009785 61 ADVIVVGAGVAGAALANTLAK-DGRRVHVIER 91 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~-~G~~V~l~Er 91 (526)
..|.|||+|..|.+.|..|++ .|.+|+++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~ 34 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLTL 34 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEECC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEeC
Confidence 469999999999999999998 5999999993
No 465
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=86.47 E-value=0.8 Score=40.49 Aligned_cols=34 Identities=29% Similarity=0.449 Sum_probs=31.1
Q ss_pred CcEEEECC-CHHHHHHHHHHHhCCCeEEEEecCCC
Q 009785 61 ADVIVVGA-GVAGAALANTLAKDGRRVHVIERDLS 94 (526)
Q Consensus 61 ~dVvIVGa-G~aGl~~A~~La~~G~~V~l~Er~~~ 94 (526)
..|+|.|| |-.|..++..|.++|.+|+++.|++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~ 38 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSS 38 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChh
Confidence 46999999 99999999999999999999999754
No 466
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=86.33 E-value=0.64 Score=47.78 Aligned_cols=33 Identities=33% Similarity=0.498 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
-.|+|||+|..|..+|..|+..|.+|+++|+++
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999999874
No 467
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=86.29 E-value=0.54 Score=44.71 Aligned_cols=31 Identities=35% Similarity=0.558 Sum_probs=29.0
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERD 92 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~ 92 (526)
-.|+|+|+|-+|.++|..|++.| +|+++.|+
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~ 159 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKDN-NIIIANRT 159 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSSS-EEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEEEEECC
Confidence 36999999999999999999999 99999887
No 468
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=86.26 E-value=0.54 Score=42.56 Aligned_cols=34 Identities=29% Similarity=0.519 Sum_probs=31.1
Q ss_pred CcEEEECC-CHHHHHHHHHHHhCCCeEEEEecCCC
Q 009785 61 ADVIVVGA-GVAGAALANTLAKDGRRVHVIERDLS 94 (526)
Q Consensus 61 ~dVvIVGa-G~aGl~~A~~La~~G~~V~l~Er~~~ 94 (526)
..|+|.|| |-.|..++..|.++|++|+++.|++.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPE 39 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGG
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcc
Confidence 46999996 99999999999999999999999854
No 469
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=86.12 E-value=0.8 Score=42.85 Aligned_cols=32 Identities=41% Similarity=0.509 Sum_probs=30.1
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 62 DVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 62 dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
.|+|||+|-+|.+.|..|.+.|.+|++++|+.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 79999999999999999999999999999873
No 470
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=86.08 E-value=1.1 Score=44.55 Aligned_cols=35 Identities=17% Similarity=0.353 Sum_probs=31.8
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSE 95 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~ 95 (526)
..|+|+|+|..|..+|..+.+.|++|++++..+..
T Consensus 15 k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~~ 49 (389)
T 3q2o_A 15 KTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKNS 49 (389)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTTC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCC
Confidence 47999999999999999999999999999987543
No 471
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=86.02 E-value=0.66 Score=43.18 Aligned_cols=33 Identities=15% Similarity=0.306 Sum_probs=30.5
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
..|.|||+|-.|...|..|.+.|.+|.+++|++
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~ 36 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSL 36 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCH
Confidence 479999999999999999999999999999874
No 472
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=85.96 E-value=0.58 Score=43.81 Aligned_cols=33 Identities=33% Similarity=0.549 Sum_probs=30.3
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCe-EEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRR-VHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~-V~l~Er~~ 93 (526)
..|.|||+|-.|...|..|++.|++ |.+++|++
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 4799999999999999999999998 89999873
No 473
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=85.87 E-value=0.66 Score=43.96 Aligned_cols=34 Identities=24% Similarity=0.331 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCC-eEEEEecCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~-~V~l~Er~~ 93 (526)
.-.|+|+|+|-+|.+++..|.+.|. +|+|+.|..
T Consensus 122 ~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~ 156 (282)
T 3fbt_A 122 NNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNP 156 (282)
T ss_dssp TSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCH
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 3579999999999999999999998 899999874
No 474
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=85.87 E-value=0.7 Score=48.34 Aligned_cols=34 Identities=21% Similarity=0.480 Sum_probs=31.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCC-eEEEEecCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~-~V~l~Er~~ 93 (526)
...|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~ 361 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 361 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSB
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 4679999999999999999999998 799999884
No 475
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=85.83 E-value=0.58 Score=47.23 Aligned_cols=34 Identities=26% Similarity=0.359 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~ 94 (526)
-..-|||.|-.|+.+|..|++.|++|+++|++++
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~ 45 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQ 45 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 3578999999999999999999999999999853
No 476
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=85.66 E-value=0.55 Score=50.88 Aligned_cols=33 Identities=24% Similarity=0.417 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
..|.|||+|..|...|..|++.|++|+++|+++
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 369999999999999999999999999999985
No 477
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=85.40 E-value=0.66 Score=44.67 Aligned_cols=33 Identities=30% Similarity=0.497 Sum_probs=30.2
Q ss_pred CCcEEEECCC-HHHHHHHHHHHhCCCeEEEEecC
Q 009785 60 DADVIVVGAG-VAGAALANTLAKDGRRVHVIERD 92 (526)
Q Consensus 60 ~~dVvIVGaG-~aGl~~A~~La~~G~~V~l~Er~ 92 (526)
.-.|+|||+| .+|..+|..|...|.+|++++|+
T Consensus 177 gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 177 GKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 4589999999 67999999999999999999987
No 478
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=85.37 E-value=0.84 Score=43.91 Aligned_cols=33 Identities=24% Similarity=0.447 Sum_probs=30.4
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCC-eEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~-~V~l~Er~~ 93 (526)
-.|+|+|+|-+|.++|..|++.|. +|+|+.|..
T Consensus 149 k~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~ 182 (312)
T 3t4e_A 149 KTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKD 182 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCC
Confidence 479999999999999999999998 799999883
No 479
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=85.35 E-value=0.71 Score=44.43 Aligned_cols=32 Identities=31% Similarity=0.409 Sum_probs=29.0
Q ss_pred cEEEECCCHHHHHHHHHHHhCCC-eEEEEecCC
Q 009785 62 DVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (526)
Q Consensus 62 dVvIVGaG~aGl~~A~~La~~G~-~V~l~Er~~ 93 (526)
.|.|||||..|.++|+.|+..|+ .+.|+|.+.
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~ 33 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTP 33 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSST
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCCh
Confidence 48999999999999999999888 599999874
No 480
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=85.31 E-value=1.6 Score=45.15 Aligned_cols=36 Identities=28% Similarity=0.402 Sum_probs=33.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC
Q 009785 59 FDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLS 94 (526)
Q Consensus 59 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~ 94 (526)
.++|++|||+|++|+.+|..|++.|.+|+|+|+...
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 45 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRS 45 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 469999999999999999999999999999999853
No 481
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=85.30 E-value=0.98 Score=42.86 Aligned_cols=33 Identities=33% Similarity=0.553 Sum_probs=30.7
Q ss_pred cEEEECC-CHHHHHHHHHHHhCCCeEEEEecCCC
Q 009785 62 DVIVVGA-GVAGAALANTLAKDGRRVHVIERDLS 94 (526)
Q Consensus 62 dVvIVGa-G~aGl~~A~~La~~G~~V~l~Er~~~ 94 (526)
.|+|.|| |-.|..++..|.++|++|+++-|++.
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~ 35 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPG 35 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 5999999 99999999999999999999998754
No 482
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=85.30 E-value=0.94 Score=42.68 Aligned_cols=34 Identities=24% Similarity=0.397 Sum_probs=30.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCC-eEEEEecCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~-~V~l~Er~~ 93 (526)
.-.++|+|+|-+|.++|..|++.|. +|+|+.|..
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~ 154 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDM 154 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 3479999999999999999999996 899998873
No 483
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=85.29 E-value=0.94 Score=42.89 Aligned_cols=34 Identities=24% Similarity=0.444 Sum_probs=30.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCC-eEEEEecCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~-~V~l~Er~~ 93 (526)
.-.|+|+|+|-+|.+.|..|++.|. +|+|+.|+.
T Consensus 126 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 160 (281)
T 3o8q_A 126 GATILLIGAGGAARGVLKPLLDQQPASITVTNRTF 160 (281)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSH
T ss_pred CCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCH
Confidence 3479999999999999999999996 899999873
No 484
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=85.06 E-value=0.95 Score=44.19 Aligned_cols=33 Identities=24% Similarity=0.364 Sum_probs=29.6
Q ss_pred CCcEEEECC-CHHHHHHHHHHHhCCC--eEEEEecC
Q 009785 60 DADVIVVGA-GVAGAALANTLAKDGR--RVHVIERD 92 (526)
Q Consensus 60 ~~dVvIVGa-G~aGl~~A~~La~~G~--~V~l~Er~ 92 (526)
...|.|||+ |-+|.++|+.+...|. +++++|.+
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~ 43 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF 43 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 357999998 9999999999999995 89999986
No 485
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=85.04 E-value=0.91 Score=45.48 Aligned_cols=39 Identities=23% Similarity=0.283 Sum_probs=33.0
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCC
Q 009785 57 CPFDADVIVVGAGVAGAALANTLAKDGRRVHVIERDLSEP 96 (526)
Q Consensus 57 ~~~~~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~~~~ 96 (526)
|++...|+|+|||..|..++..+.+.|++|.+++ .+..+
T Consensus 21 mm~~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d-~~~~p 59 (403)
T 3k5i_A 21 MWNSRKVGVLGGGQLGRMLVESANRLNIQVNVLD-ADNSP 59 (403)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEE-STTCT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEE-CCCCc
Confidence 3335689999999999999999999999999999 65433
No 486
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=84.90 E-value=0.9 Score=44.43 Aligned_cols=33 Identities=27% Similarity=0.287 Sum_probs=29.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
-.|+|+|+|+.|++++..+...|.+|+.+++++
T Consensus 178 ~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~ 210 (348)
T 3two_A 178 TKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNE 210 (348)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 369999999999999999989999999998774
No 487
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=84.82 E-value=0.94 Score=42.98 Aligned_cols=32 Identities=28% Similarity=0.412 Sum_probs=30.0
Q ss_pred CcEEEEC-CCHHHHHHHHHHHhCCCeEEEEecC
Q 009785 61 ADVIVVG-AGVAGAALANTLAKDGRRVHVIERD 92 (526)
Q Consensus 61 ~dVvIVG-aG~aGl~~A~~La~~G~~V~l~Er~ 92 (526)
-.|+|+| +|.+|.++|..|++.|.+|+++.|+
T Consensus 120 k~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~ 152 (287)
T 1lu9_A 120 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRK 152 (287)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence 4699999 8999999999999999999999987
No 488
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=84.60 E-value=0.74 Score=42.96 Aligned_cols=30 Identities=27% Similarity=0.272 Sum_probs=27.9
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCeEEEEec
Q 009785 62 DVIVVGAGVAGAALANTLAKDGRRVHVIER 91 (526)
Q Consensus 62 dVvIVGaG~aGl~~A~~La~~G~~V~l~Er 91 (526)
.|.|||+|-.|...|..|++.|++|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 589999999999999999999999999766
No 489
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=84.58 E-value=1.3 Score=43.80 Aligned_cols=33 Identities=21% Similarity=0.264 Sum_probs=29.0
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCC-eEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~-~V~l~Er~~ 93 (526)
-.|+|+|+|+.|+.++..++..|. +|+.+++++
T Consensus 197 ~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~ 230 (376)
T 1e3i_A 197 STCAVFGLGCVGLSAIIGCKIAGASRIIAIDING 230 (376)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCG
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCH
Confidence 369999999999999988888998 799998763
No 490
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=84.54 E-value=0.93 Score=45.79 Aligned_cols=34 Identities=41% Similarity=0.653 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCC-eEEEEecCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~-~V~l~Er~~ 93 (526)
+..|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 40 ~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D~ 74 (434)
T 1tt5_B 40 TCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDT 74 (434)
T ss_dssp TCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECCB
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 4689999999999999999999998 799999874
No 491
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=84.51 E-value=0.76 Score=44.99 Aligned_cols=34 Identities=24% Similarity=0.412 Sum_probs=31.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCC-eEEEEecCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~-~V~l~Er~~ 93 (526)
+..|+|||+|..|..+|..|++.|+ +++|+|.+.
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~ 70 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQ 70 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCC
Confidence 3589999999999999999999998 799999874
No 492
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=84.50 E-value=0.84 Score=44.27 Aligned_cols=33 Identities=24% Similarity=0.474 Sum_probs=29.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCC--eEEEEecC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGR--RVHVIERD 92 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~--~V~l~Er~ 92 (526)
+..|.|||||-+|.++|+.|+..+. .+.|+|.+
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~ 43 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 3689999999999999999998886 79999986
No 493
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=84.37 E-value=0.72 Score=46.29 Aligned_cols=34 Identities=41% Similarity=0.604 Sum_probs=30.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCC-eEEEEecCC
Q 009785 60 DADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (526)
Q Consensus 60 ~~dVvIVGaG~aGl~~A~~La~~G~-~V~l~Er~~ 93 (526)
.-.|+|||+|..|..+|..|...|. +|++++|..
T Consensus 167 g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~ 201 (404)
T 1gpj_A 167 DKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTY 201 (404)
T ss_dssp TCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSH
T ss_pred CCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 3479999999999999999999998 899999873
No 494
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=84.20 E-value=0.86 Score=42.93 Aligned_cols=33 Identities=27% Similarity=0.498 Sum_probs=30.2
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCC-eEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGR-RVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~-~V~l~Er~~ 93 (526)
-.|+|+|+|-+|.+++..|.+.|. +|+|+.|..
T Consensus 120 ~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~ 153 (271)
T 1npy_A 120 AKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNV 153 (271)
T ss_dssp SCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 479999999999999999999997 799998873
No 495
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=84.00 E-value=0.89 Score=43.87 Aligned_cols=32 Identities=28% Similarity=0.374 Sum_probs=29.3
Q ss_pred cEEEECC-CHHHHHHHHHHHhCC--CeEEEEecCC
Q 009785 62 DVIVVGA-GVAGAALANTLAKDG--RRVHVIERDL 93 (526)
Q Consensus 62 dVvIVGa-G~aGl~~A~~La~~G--~~V~l~Er~~ 93 (526)
.|+|||| |-+|.++|..|+..| ..+.++|.+.
T Consensus 2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~ 36 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH 36 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc
Confidence 6999998 999999999999998 6899999874
No 496
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=83.97 E-value=1 Score=44.40 Aligned_cols=32 Identities=28% Similarity=0.423 Sum_probs=29.6
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERD 92 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~ 92 (526)
..|+|+|+|..|..+|..|.+.|.+|++.|++
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~ 205 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTEGAKLVVTDVN 205 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEcCC
Confidence 46999999999999999999999999999864
No 497
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=83.96 E-value=1.1 Score=43.42 Aligned_cols=35 Identities=29% Similarity=0.442 Sum_probs=31.0
Q ss_pred CCcEEEECC-CHHHHHHHHHHHhCCCeEEEEecCCC
Q 009785 60 DADVIVVGA-GVAGAALANTLAKDGRRVHVIERDLS 94 (526)
Q Consensus 60 ~~dVvIVGa-G~aGl~~A~~La~~G~~V~l~Er~~~ 94 (526)
...|+|.|| |-.|..++..|.++|++|+++.|.+.
T Consensus 19 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 19 SHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 357999999 99999999999999999999999864
No 498
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=83.95 E-value=0.85 Score=45.18 Aligned_cols=34 Identities=24% Similarity=0.375 Sum_probs=31.7
Q ss_pred CCcEEEECC-CHHHHHHHHHHHhCCC---eEEEEecCC
Q 009785 60 DADVIVVGA-GVAGAALANTLAKDGR---RVHVIERDL 93 (526)
Q Consensus 60 ~~dVvIVGa-G~aGl~~A~~La~~G~---~V~l~Er~~ 93 (526)
...|+|+|| |.+|+.++-.+...|. +|+++|++.
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~ 251 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKE 251 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHH
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccc
Confidence 578999999 9999999999999998 999999975
No 499
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=83.89 E-value=1.3 Score=42.78 Aligned_cols=33 Identities=21% Similarity=0.441 Sum_probs=30.5
Q ss_pred CcEEEECC-CHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVGA-GVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGa-G~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
..|+|.|| |-.|..++..|.++|++|+++.|..
T Consensus 21 ~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~ 54 (330)
T 2pzm_A 21 MRILITGGAGCLGSNLIEHWLPQGHEILVIDNFA 54 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 46999998 9999999999999999999999964
No 500
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=83.75 E-value=0.91 Score=44.63 Aligned_cols=33 Identities=27% Similarity=0.224 Sum_probs=29.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Q 009785 61 ADVIVVGAGVAGAALANTLAKDGRRVHVIERDL 93 (526)
Q Consensus 61 ~dVvIVGaG~aGl~~A~~La~~G~~V~l~Er~~ 93 (526)
-.|+|+|+|+.|+.++..++..|.+|+.+++++
T Consensus 181 ~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~ 213 (360)
T 1piw_A 181 KKVGIVGLGGIGSMGTLISKAMGAETYVISRSS 213 (360)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 369999999999999988888999999999874
Done!