BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009788
(525 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ATB4|TAD2B_ARATH Transcriptional adapter ADA2b OS=Arabidopsis thaliana GN=ADA2B PE=1
SV=1
Length = 487
Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/526 (65%), Positives = 407/526 (77%), Gaps = 44/526 (8%)
Query: 1 MGRSRGNFHANDEDPTQRSRRKKN---VSSDNSDTAAPGQGAGEGKRALYHCNYCNKDIT 57
MGRSRGNF N EDPTQR+R+KKN V + S + PG G GK Y+C+YC KDIT
Sbjct: 1 MGRSRGNFQ-NFEDPTQRTRKKKNAANVENFESTSLVPGAEGG-GK---YNCDYCQKDIT 55
Query: 58 GKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSFPLICPDWNADDEILLLE 117
GKIRIKCAVCPDFDLCIEC SVG E+ PHK +HPYRVM NL+FPLICPDW+ADDE+LLLE
Sbjct: 56 GKIRIKCAVCPDFDLCIECMSVGAEITPHKCDHPYRVMGNLTFPLICPDWSADDEMLLLE 115
Query: 118 GIEMYGLGNWAEIAEHVGTKTKELCIEHYTNVYMNSPFFPLPDMSHVVGKNRKELLAMAK 177
G+E+YGLGNWAE+AEHVGTK+KE C+EHY N+Y+NSPFFPLPDMSHV GKNRKEL AMAK
Sbjct: 116 GLEIYGLGNWAEVAEHVGTKSKEQCLEHYRNIYLNSPFFPLPDMSHVAGKNRKELQAMAK 175
Query: 178 GHIDDKKVAVAGPSKPGEATVKEESPFSPSRVKIEEMHKVGPSGRGLNADPQTERSSKGK 237
G IDDKK E +KEE PFSP +VK+E+ K + +RS GK
Sbjct: 176 GRIDDKK---------AEQNMKEEYPFSPPKVKVEDTQK----------ESFVDRSFGGK 216
Query: 238 KPVTSGNDGPSLVELSGYNSKRQEFDPEYDNDAEQLLAEMEFKDADSEEERDIKLRVLRI 297
KPV++ + SLVELS YN KR+EFDPEYDNDAEQLLAEMEFK+ D+ EE ++KLRVLRI
Sbjct: 217 KPVSTSVNN-SLVELSNYNQKREEFDPEYDNDAEQLLAEMEFKENDTPEEHELKLRVLRI 275
Query: 298 YSKRLDERKRRKDFILERNLLYPNPFEKDLSPEERELCRRYDVFMRFHSKEDHEDLLQTV 357
YSKRLDERKRRK+FI+ERNLLYPNPFEKDLS EE+ CRR DVFMRFHSKE+H++LL+ V
Sbjct: 276 YSKRLDERKRRKEFIIERNLLYPNPFEKDLSQEEKVQCRRLDVFMRFHSKEEHDELLRNV 335
Query: 358 ISEHRTLKRIQDLKEARAAGCRTSAEADRYLELKRGREAEEASRRAKEGGHAGASSQGGA 417
+SE+R +KR++DLKEA+ AGCR++AEA+RYL KR RE EE R KE G G
Sbjct: 336 VSEYRMVKRLKDLKEAQVAGCRSTAEAERYLGRKRKRENEEGMNRGKESGQFGQ------ 389
Query: 418 NVFMASESLRKDSNSNSRPSGQASSSHVNDLYIMGFNETQLLSEAEKRLCCEIRLAPPLY 477
+A E SRP QASSS+VNDL ++GF E+QLLSE+EKRLC E++L PP+Y
Sbjct: 390 ---IAGE-------MGSRPPVQASSSYVNDLDLIGFTESQLLSESEKRLCSEVKLVPPVY 439
Query: 478 LRMQEVMSREIFSGNVNNKADAHHLFKIEPSKIDRVYDMLVKKGLA 523
L+MQ+VMS EIF GNV K+DA+ LFKI+P+K+DRVYDMLVKKG+A
Sbjct: 440 LQMQQVMSHEIFKGNVTKKSDAYSLFKIDPTKVDRVYDMLVKKGIA 485
>sp|Q75LL6|TADA2_ORYSJ Transcriptional adapter ADA2 OS=Oryza sativa subsp. japonica
GN=ADA2 PE=2 SV=2
Length = 567
Score = 607 bits (1565), Expect = e-173, Method: Compositional matrix adjust.
Identities = 321/563 (57%), Positives = 394/563 (69%), Gaps = 49/563 (8%)
Query: 1 MGRSRGNFHANDEDPTQRSRRKKNVSS----DNSDTAAPGQGAGEGKRALYHCNYCNKDI 56
MGRSRG ++ D++ RS+R++ SS D+ A G G G GK+ALYHCNYCNKDI
Sbjct: 1 MGRSRGVPNSGDDETNHRSKRRRVASSGDAPDSLSAACGGAGEGGGKKALYHCNYCNKDI 60
Query: 57 TGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSFPLICPDWNADDEILLL 116
+GKIRIKC+ CPDFDLC+ECFSVG EV PH+SNHPYRVMDNLSFPLICPDWNAD+EILLL
Sbjct: 61 SGKIRIKCSKCPDFDLCVECFSVGAEVTPHRSNHPYRVMDNLSFPLICPDWNADEEILLL 120
Query: 117 EGIEMYGLGNWAEIAEHVGTKTKELCIEHYTNVYMNSPFFPLPDMSHVVGKNRKELLAMA 176
EGIEMYGLGNWAE+AEHVGTKTK CI+HYT YMNSP +PLPDMSHV GKNRKELLAMA
Sbjct: 121 EGIEMYGLGNWAEVAEHVGTKTKAQCIDHYTTAYMNSPCYPLPDMSHVNGKNRKELLAMA 180
Query: 177 KGHIDDKKVAVAGPSKPGEATVKEESPFSPSRVKIEEMHKVGPSGR-------------- 222
K + KKV PG+ T K+ESPFSP RVK+E+ G +GR
Sbjct: 181 KVQGESKKVL------PGDLTPKDESPFSPPRVKVEDALGEGLAGRSPSHIAGGANKKAS 234
Query: 223 -------GLNA----DPQTERSSKGKKPVTSGNDGPSLVELSGYNSKRQEFDPEYDNDAE 271
G N D +RS KKP S ++GPSL ELSGYNSKR EFDPEYDNDAE
Sbjct: 235 NVGQFKDGANVAKVEDGHVDRSIGVKKPRYSADEGPSLTELSGYNSKRHEFDPEYDNDAE 294
Query: 272 QLLAEMEFKDADSEEERDIKLRVLRIYSKRLDERKRRKDFILERNLLYPNPFEKDLSPEE 331
Q LAEMEFK+ DSE +R++KLRVLRIY RLDERKRRK+FILERNLL+PNP EKDL+ E+
Sbjct: 295 QALAEMEFKETDSETDRELKLRVLRIYLSRLDERKRRKEFILERNLLFPNPLEKDLTNED 354
Query: 332 RELCRRYDVFMRFHSKEDHEDLLQTVISEHRTLKRIQDLKEARAAGCRTSAEADRYLELK 391
+E+ RY VFMRF SKE+HE L+++V+ E + +RIQ+L+E R+AGCRT AEA ++E K
Sbjct: 355 KEVYHRYKVFMRFLSKEEHEALVRSVLEERKIRRRIQELQECRSAGCRTLAEAKIHIEQK 414
Query: 392 RGREAEEASRRAKEGGHAGAS--------------SQGGANVFMASESLRKDSNSNSRPS 437
R +E E +++AKE G ++ S G + SL + + +
Sbjct: 415 RKKEHEVNAQKAKESGQLLSNTKVVHKTNRPMKIESDGNLDQKKGGASLDSTGRDSPKTT 474
Query: 438 GQASSSHVNDLYIMGFNETQLLSEAEKRLCCEIRLAPPLYLRMQEVMSREIFSGNVNNKA 497
G A + H +D I+GF +LLS +EK LCC+ RL P YL+MQEV+ +EIF G+V K
Sbjct: 475 GHAGTKHWDDWDIVGFPGAELLSTSEKNLCCQNRLLPNHYLKMQEVLMQEIFKGSVAKKE 534
Query: 498 DAHHLFKIEPSKIDRVYDMLVKK 520
DAH LFK++P+K+D VYDM+ KK
Sbjct: 535 DAHVLFKVDPAKVDNVYDMVTKK 557
>sp|Q9SFD5|TAD2A_ARATH Transcriptional adapter ADA2a OS=Arabidopsis thaliana GN=ADA2A PE=1
SV=1
Length = 548
Score = 467 bits (1202), Expect = e-131, Method: Compositional matrix adjust.
Identities = 262/551 (47%), Positives = 355/551 (64%), Gaps = 34/551 (6%)
Query: 1 MGRSRGNFHANDED--PTQRSRRKKNVSSDNSDTA-APGQGAG-EGKRALYHCNYCNKDI 56
MGRS+ +ED P + R+K ++ +N+ + + G AG E K LY CNYC+KD+
Sbjct: 1 MGRSKLASRPAEEDLNPGKSKRKKISLGPENAAASISTGIEAGNERKPGLYCCNYCDKDL 60
Query: 57 TGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSFPLICPDWNADDEILLL 116
+G +R KCAVC DFDLC+ECFSVGVE++ HK++HPYRVMDNLSF L+ DWNAD+EILLL
Sbjct: 61 SGLVRFKCAVCMDFDLCVECFSVGVELNRHKNSHPYRVMDNLSFSLVTSDWNADEEILLL 120
Query: 117 EGIEMYGLGNWAEIAEHVGTKTKELCIEHYTNVYMNSPFFPLPDMSHVVGKNRKELLAMA 176
E I YG GNW E+A+HVG+KT CI+H+ + YM SP FPLPD+SH +GK++ ELLAM+
Sbjct: 121 EAIATYGFGNWKEVADHVGSKTTTECIKHFNSAYMQSPCFPLPDLSHTIGKSKDELLAMS 180
Query: 177 KGHIDDKKVAVAGPS---------KPGEATVKEESP-----FSPSRVKIEEMHKVG--PS 220
K D V P+ P A +K E+ P + + K G P
Sbjct: 181 K----DSAVKTEIPAFVRLSPKEELPVSAEIKHEASGKVNEIDPPLSALAGVKKKGNVPQ 236
Query: 221 GRGL----NADPQTERSSKGKKPVTSGNDGPSLVELSGYNSKRQEFDPEYDNDAEQLLAE 276
+ + A Q++RS KK G P + EL GYN KR+EF+ E+DNDAEQLLA+
Sbjct: 237 AKDIIKLEAAKQQSDRSVGEKKLRLPGEKVPLVTELYGYNLKREEFEIEHDNDAEQLLAD 296
Query: 277 MEFKDADSEEERDIKLRVLRIYSKRLDERKRRKDFILERNLLYPNPFEKDLSPEERELCR 336
MEFKD+D++ ER+ KL+VLRIYSKRLDERKRRK+F+LERNLLYP+ +E LS EER++ +
Sbjct: 297 MEFKDSDTDAEREQKLQVLRIYSKRLDERKRRKEFVLERNLLYPDQYEMSLSAEERKIYK 356
Query: 337 RYDVFMRFHSKEDHEDLLQTVISEHRTLKRIQDLKEARAAGCRTSAEADRYLELKRGREA 396
VF RF SKE+H++L++ VI EH+ L+RI+DL+EAR AGCRT+++A+R++E KR +EA
Sbjct: 357 SCKVFARFQSKEEHKELIKKVIEEHQILRRIEDLQEARTAGCRTTSDANRFIEEKRKKEA 416
Query: 397 EEAS----RRAKEGGHAGASSQGGANVFMASESLRKDSNSNSRPSGQASSSHVNDLYIMG 452
EE+ G AG + + + DS P S D + G
Sbjct: 417 EESMLLRLNHGAPGSIAGKTLKSPRGLPRNLHPFGSDSLPKVTPPRIYSGLDTWD--VDG 474
Query: 453 FNETQLLSEAEKRLCCEIRLAPPLYLRMQEVMSREIFSGNVNNKADAHHLFKIEPSKIDR 512
LLSE EK++C E R+ P YL+M ++++REI G + K+DA+ FK+EPSK+DR
Sbjct: 475 LLGADLLSETEKKMCNETRILPVHYLKMLDILTREIKKGQIKKKSDAYSFFKVEPSKVDR 534
Query: 513 VYDMLVKKGLA 523
VYDMLV KG+
Sbjct: 535 VYDMLVHKGIG 545
>sp|Q02336|ADA2_YEAST Transcriptional adapter 2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=ADA2 PE=1 SV=1
Length = 434
Score = 233 bits (595), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 142/478 (29%), Positives = 238/478 (49%), Gaps = 61/478 (12%)
Query: 47 YHCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSFPLICPD 106
+HC+ C+ D T ++R+ CA+CP++DLC+ CFS G H+ H YR+++ S+P++CPD
Sbjct: 5 FHCDVCSADCTNRVRVSCAICPEYDLCVPCFSQGSYTGKHRPYHDYRIIETNSYPILCPD 64
Query: 107 WNADDEILLLEGIEMYGLGNWAEIAEHVGTKTKELCIEHYTNVYMNSPFFPLPDMSHVVG 166
W AD+E+ L++G + GLGNW +IA+H+G++ KE EHY Y+ S ++P+PD++ +
Sbjct: 65 WGADEELQLIKGAQTLGLGNWQDIADHIGSRGKEEVKEHYLKYYLESKYYPIPDITQNIH 124
Query: 167 KNRKELLAMAKGHIDDKKVAVAGPSKPGEATVKEESPFSPSRVKIEEMHKVGPSGRGLNA 226
+ E L + I+ + E P P R
Sbjct: 125 VPQDEFLEQRRHRIESFR----------------ERPLEPPR------------------ 150
Query: 227 DPQTERSSKGKKPVTSGNDGPSLVELSGYNSKRQEFDPEYDNDAEQLLAEMEFKDADSEE 286
KP+ S PS E+ G+ R EF+ E++N+AE + +M F+ D
Sbjct: 151 -----------KPMAS---VPSCHEVQGFMPGRLEFETEFENEAEGPVKDMVFEPDDQPL 196
Query: 287 ERDIKLRVLRIYSKRLDERKRRKDFILERNLL---YPNPFEKDLSPEERELCRRYDVFMR 343
+ ++K +L IY+ RL R +K + E +L+ +K S E +EL R F R
Sbjct: 197 DIELKFAILDIYNSRLTTRAEKKRLLFENHLMDYRKLQAIDKKRSKEAKELYNRIKPFAR 256
Query: 344 FHSKEDHEDLLQTVISEHRTLKRIQDLKEARAAGCRTSAEADRYLELKRGREAEEASRRA 403
+ +D E+ + ++ E RIQ L+E R+ G T +Y K+ R S
Sbjct: 257 VMTAQDFEEFSKDILEELHCRARIQQLQEWRSNGLTTLEAGLKYERDKQAR----ISSFE 312
Query: 404 KEGGHAGASSQGGANVFMASESLRKD---SNSNSRPSGQASSSHVNDLYIMGFNETQLLS 460
K G AS G + + ++ + R + S + S G+ + ++D I + LLS
Sbjct: 313 KFGASTAASLSEGNSRYRSNSAHRSNAEYSQNYSENGGRKKNMTISD--IQHAPDYALLS 370
Query: 461 EAEKRLCCEIRLAPPLYLRMQEVMSREIF-SGNVNNKADAHHLFKIEPSKIDRVYDML 517
E++LC ++++ P YL ++EVM RE+ +G +K+ L I+P K +R+YD
Sbjct: 371 NDEQQLCIQLKILPKPYLVLKEVMFRELLKTGGNLSKSACRELLNIDPIKANRIYDFF 428
>sp|Q9P7J7|ADA2_SCHPO Transcriptional adapter 2 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=ada2 PE=1 SV=1
Length = 437
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 143/483 (29%), Positives = 228/483 (47%), Gaps = 73/483 (15%)
Query: 47 YHCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSFPLICPD 106
YHCN C +DIT I I+C C DFDLCI CF+ G + H +HPYR+++ S+P+ +
Sbjct: 6 YHCNVCAQDITRSIHIRCVECVDFDLCIPCFTSGASLGTHHPSHPYRIIETNSYPIFDEN 65
Query: 107 WNADDEILLLEGIEMYGLGNWAEIAEHVG-TKTKELCIEHYTNVYMNSPFFPLPDMSHVV 165
W AD+E+LL++ E GLGNWA+IA++VG +TKE C +HY Y+ S +PL +
Sbjct: 66 WGADEELLLIDACETLGLGNWADIADYVGNARTKEECRDHYLKTYIESDCYPLASVE--- 122
Query: 166 GKNRKELLAMAKGHIDDKKVAVAGPSKPGEATVKEESPFSPSRVKIEEM-HKVGPSGRGL 224
G +D ++A A R +IE + L
Sbjct: 123 ----------LPGPVD--RIAFAA----------------RKRARIEAFQPPPIIPQKPL 154
Query: 225 NADPQTERSSKGKKPVTSGNDGPSLVELSGYNSKRQEFDPEYDNDAEQLLAEMEFKD--- 281
+ PQ E+ GY R EFD EY N+AE + +M F D
Sbjct: 155 ASTPQCH-------------------EIQGYMPGRLEFDQEYMNEAELPIKDMNFDDDLH 195
Query: 282 ADSEEERDIKLRVLRIYSKRLDERKRRKDFILERNLLYPNPF---EKDLSPEERELCRRY 338
++ E +KL +L IY+ RL R RK I NLL EK +S EER L +
Sbjct: 196 ESAKHEMQLKLTMLNIYNSRLTRRAVRKQTIFNHNLLDYRRLQANEKRMSKEERNLLNKT 255
Query: 339 DVFMRFHSKEDHEDLLQTVISEHRTLKRIQDLKEARAAGCRTSAEADRYLELKRGR--EA 396
F R + D++ + + + K+I DL+E R G T + +Y K + +
Sbjct: 256 KAFARLLTGPDYQKFVNSYHEQITLKKQISDLQEWRQMGLTTLEQGHKYERDKTQKFLLS 315
Query: 397 EEASRRAKEGGHAGASSQGGANVFMASESLRKDSNSNSRPSGQASSSHVNDLYIMGFNET 456
+ ++ K+ H + +Q + F + + + P+ ++S+ +
Sbjct: 316 KASASYDKQLRHVKSFNQTTSAPFQVRDIQKIVPRKPATPTMFSASA-----------DR 364
Query: 457 QLLSEAEKRLCCEIRLAPPLYLRMQ-EVMSREIFSGNVNNKADAHHLFK-IEPSKIDRVY 514
QLLSE E+ LC ++++ P +L ++ ++S + S K DA +LFK ++ +K+++VY
Sbjct: 365 QLLSEDEQALCSKLQIFPKPFLALKFALISASLTSKKPFQKTDAVNLFKHLDANKVEQVY 424
Query: 515 DML 517
D
Sbjct: 425 DFF 427
>sp|O75478|TAD2A_HUMAN Transcriptional adapter 2-alpha OS=Homo sapiens GN=TADA2A PE=1 SV=3
Length = 443
Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 130/469 (27%), Positives = 201/469 (42%), Gaps = 68/469 (14%)
Query: 62 IKCAVC--PDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSFPLICPDWNADDEILLLEGI 119
IKCA C P F LC++CF+ G E H+S+H Y +M + FP++ P W A +E+ LLE +
Sbjct: 29 IKCAECGPPPFFLCLQCFTRGFEYKKHQSDHTYEIMTS-DFPVLDPSWTAQEEMALLEAV 87
Query: 120 EMYGLGNWAEIAEHVGTKTKELCIEHYTNVYMNSPFFPLPDMSHVVGKNRKELLAMAKGH 179
G GNW ++A + TKTKE C +HY ++N+P F LL + +
Sbjct: 88 MDCGFGNWQDVANQMCTKTKEECEKHYMKHFINNPLFA------------STLLNLKQ-- 133
Query: 180 IDDKKVAVAGPSKPGEATVKEESPFSPSRVKIEEMHKVGPSGRGLNADPQTERSSKGKKP 239
A +K + + S P R + + R G P
Sbjct: 134 --------AEEAKTADTAIPFHSTDDPPRPTFDSL---------------LSRDMAGYMP 170
Query: 240 VTSGNDGPSLVELSGYNSKRQEFDPEYDNDAEQLLAEMEFKDADSEEERDIKLRVLRIYS 299
R +F E+DN AE L +++F + DS+ +K+ V+ IY
Sbjct: 171 A------------------RADFIEEFDNYAEWDLRDIDFVEDDSDILHALKMAVVDIYH 212
Query: 300 KRLDERKRRKDFILERNLLYPNPF---EKDLSPEERELCRRYDVFMRFHSKEDHEDLLQT 356
RL ER+RRK I + L+ F E+ E ++L F R +H+ +++
Sbjct: 213 SRLKERQRRKKIIRDHGLINLRKFQLMERRYPKEVQDLYETMRRFARIVGPVEHDKFIES 272
Query: 357 VISEHRTLKRIQDLKEARAAGCRTSAEADRYLELKRGREAEEASRRAKEGGHAGASSQGG 416
E + I+ L+E R AG A Y LK+ RE E R
Sbjct: 273 HALEFELRREIKRLQEYRTAGITNFCSARTYDHLKKTREEERLKRTMLSEVLQYIQDSSA 332
Query: 417 ANVFMASESLRKDSNSNSRP----SGQASSSHVNDLYIMGFNETQLLSEAEKRLCCEIRL 472
++ ++ S S P SG+ S+ +N + G T+ L+E EK LC +RL
Sbjct: 333 CQQWLRRQADIDSGLSPSIPMASNSGRRSAPPLN---LTGLPGTEKLNEKEKELCQMVRL 389
Query: 473 APPLYLRMQEVMSREIFSGNVNNKADAHHLFKIEPSKIDRVYDMLVKKG 521
P YL + + E A A L KI+ +K ++YD L+++G
Sbjct: 390 VPGAYLEYKSALLNECNKQGGLRLAQARALIKIDVNKTRKIYDFLIREG 438
>sp|Q3SZP8|TAD2A_BOVIN Transcriptional adapter 2-alpha OS=Bos taurus GN=TADA2A PE=2 SV=1
Length = 443
Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 130/469 (27%), Positives = 201/469 (42%), Gaps = 68/469 (14%)
Query: 62 IKCAVC--PDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSFPLICPDWNADDEILLLEGI 119
IKCA C P F LC++CF+ G E H+S+H Y +M + FP++ P W A +E+ LLE +
Sbjct: 29 IKCAECGPPPFFLCLQCFTRGFEYKKHQSDHTYEIMTS-DFPVLDPSWTAQEEMALLEAV 87
Query: 120 EMYGLGNWAEIAEHVGTKTKELCIEHYTNVYMNSPFFPLPDMSHVVGKNRKELLAMAKGH 179
G GNW ++A + TKTKE C +HY ++N+P F LL + +
Sbjct: 88 MDCGFGNWQDVANQMCTKTKEECEKHYMKHFINNPLFA------------STLLNLKQ-- 133
Query: 180 IDDKKVAVAGPSKPGEATVKEESPFSPSRVKIEEMHKVGPSGRGLNADPQTERSSKGKKP 239
A +K + + S P R + + R G P
Sbjct: 134 --------AEEAKTADTAIPFHSADDPPRPTFDSL---------------LSRDMAGYMP 170
Query: 240 VTSGNDGPSLVELSGYNSKRQEFDPEYDNDAEQLLAEMEFKDADSEEERDIKLRVLRIYS 299
R +F E+DN AE L +++F + DS+ +K+ V+ IY
Sbjct: 171 A------------------RADFIEEFDNYAEWDLRDIDFVEDDSDILHALKMAVVDIYH 212
Query: 300 KRLDERKRRKDFILERNLLYPNPF---EKDLSPEERELCRRYDVFMRFHSKEDHEDLLQT 356
RL ER+RRK I + L+ F E+ E ++L F R +H+ +++
Sbjct: 213 SRLKERQRRKKIIRDHGLINLRKFQLMERRYPKEVQDLYETMRRFARIVGPVEHDKFIES 272
Query: 357 VISEHRTLKRIQDLKEARAAGCRTSAEADRYLELKRGREAEEASRRAKEGGHAGASSQGG 416
E + I+ L+E R AG A Y LK+ RE E R
Sbjct: 273 HALEFELRREIKRLQEYRTAGITNFCSARTYDHLKKTREEERLKRTMLSEVLQYIQDSSA 332
Query: 417 ANVFMASESLRKDSNSNSRP----SGQASSSHVNDLYIMGFNETQLLSEAEKRLCCEIRL 472
++ ++ S S P SG+ S+ +N + G T+ L+E EK LC +RL
Sbjct: 333 CQQWLRRQADIDSGLSPSVPMTSNSGRRSAPPLN---LTGLPGTEKLNEKEKELCQMVRL 389
Query: 473 APPLYLRMQEVMSREIFSGNVNNKADAHHLFKIEPSKIDRVYDMLVKKG 521
P YL + + E A A L KI+ +K ++YD L+++G
Sbjct: 390 VPGAYLEYKSALLNECNKQGGLRLAQARALIKIDVNKTRKIYDFLIREG 438
>sp|Q6AYE3|TAD2A_RAT Transcriptional adapter 2-alpha OS=Rattus norvegicus GN=Tada2a PE=2
SV=1
Length = 443
Score = 159 bits (403), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 129/469 (27%), Positives = 200/469 (42%), Gaps = 68/469 (14%)
Query: 62 IKCAVC--PDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSFPLICPDWNADDEILLLEGI 119
IKCA C P F LC++CF+ G E H+S+H Y +M + FP++ P W A +E+ LLE +
Sbjct: 29 IKCAECGPPPFFLCLQCFTRGFEYKKHQSDHTYEIMTS-DFPVLDPSWTAQEEMALLEAV 87
Query: 120 EMYGLGNWAEIAEHVGTKTKELCIEHYTNVYMNSPFFPLPDMSHVVGKNRKELLAMAKGH 179
G GNW ++A + TKTKE C +HY ++N+P F LL + +
Sbjct: 88 MDCGFGNWQDVANQMCTKTKEECEKHYMKHFINNPLFA------------STLLNLKQ-- 133
Query: 180 IDDKKVAVAGPSKPGEATVKEESPFSPSRVKIEEMHKVGPSGRGLNADPQTERSSKGKKP 239
A +K + + S P R + + R G P
Sbjct: 134 --------AEAAKTADTAIPFHSADDPPRPAFDSL---------------LSRDMAGYMP 170
Query: 240 VTSGNDGPSLVELSGYNSKRQEFDPEYDNDAEQLLAEMEFKDADSEEERDIKLRVLRIYS 299
R +F E+DN AE L +++F + DS+ +K+ V+ IY
Sbjct: 171 A------------------RADFIEEFDNYAEWDLRDIDFVEDDSDILHALKMAVVDIYH 212
Query: 300 KRLDERKRRKDFILERNLLYPNPF---EKDLSPEERELCRRYDVFMRFHSKEDHEDLLQT 356
RL ER+RRK I + L+ F E+ E ++L F R +H+ +++
Sbjct: 213 SRLKERQRRKKIIRDHGLVNLRKFRLMERRYPKEVQDLYETMRRFARIVGPVEHDKFIES 272
Query: 357 VISEHRTLKRIQDLKEARAAGCRTSAEADRYLELKRGREAEEASRRAKEGGHAGASSQGG 416
E + I+ L+E R AG A Y LK+ RE E R
Sbjct: 273 HALEFELRREIKRLQEYRTAGITNFCSARTYDHLKKTREEERLKRTMLSEVLQYIQDSSA 332
Query: 417 ANVFMASESLRKDSNSNSRPSGQASSS----HVNDLYIMGFNETQLLSEAEKRLCCEIRL 472
++ ++ D +S PS +S+ L + G T+ L+E EK LC +RL
Sbjct: 333 CQQWLRRQA---DIDSGLSPSVLMASNSGRRSAPPLNLTGLPGTEKLNEKEKELCQVVRL 389
Query: 473 APPLYLRMQEVMSREIFSGNVNNKADAHHLFKIEPSKIDRVYDMLVKKG 521
P YL + + E A A L KI+ +K ++YD L+++G
Sbjct: 390 VPGAYLEYKSALLNECHKQGGLRLAQARALIKIDVNKTRKIYDFLIREG 438
>sp|Q6NRB5|TAD2B_XENLA Transcriptional adapter 2-beta OS=Xenopus laevis GN=tada2b PE=2
SV=1
Length = 420
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 114/458 (24%), Positives = 199/458 (43%), Gaps = 104/458 (22%)
Query: 48 HCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSFPLICPD- 106
+C YC D+T +R++C C D +LC +CFS G E+ H+ H Y+++D F L P+
Sbjct: 8 YCVYCLADVTS-LRLRCTECQDIELCTDCFSAGAEIGNHRRWHGYQLVDGGRFTLWGPEA 66
Query: 107 ---WNADDEILLLEGIEMYGLGNWAEIAEHVG-TKTKELCIEHYTNVYMNSPFFPLPDMS 162
W + +E LLL+ IE +G GNW ++A HVG ++T +EHY +Y++
Sbjct: 67 EGGWTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPTEVMEHYVTMYIH---------- 116
Query: 163 HVVGKNRKELLAMAKGHIDDKKVAVAGPSKPGEATVKEESPFSPSRVKIEEMHKVGPSGR 222
G++ + + P++ + T P SPS + P+
Sbjct: 117 ---------------GNLGKACIPDSIPNRVTDHTCPTGGPLSPS------LTTPLPTLD 155
Query: 223 GLNADPQTERSSKGKKPVTSGNDGPSLVELSGYNSKRQEFDPEYDNDAEQLLAEMEFKDA 282
AD Q GY R +++ E+D +AE L++ +
Sbjct: 156 LTVADQQQ----------------------LGYMPLRDDYEIEFDQEAETLISGLSVNYD 193
Query: 283 DSEEERDIKLRVLRIYSKRLDERKRRKDFILERNLL----------YPNPFEKDLSPEER 332
D + E ++K + +Y ++L ER+RRK + NL+ P ++ +S EE+
Sbjct: 194 DDDVEVELKEAYVDMYVRKLKERQRRKSLARDYNLVPAFLGKDKKEKEKPAKRKISKEEK 253
Query: 333 ELCRRYDVFMRFHSKEDHEDLLQTVISEHRTLKRIQDLKEARAAGCRTSAEADRYLELKR 392
EL + +F S ++ ED + + E +I++L+ R G + E+ Y +
Sbjct: 254 ELRLKLRPLYQFMSNKEIEDCFENMHKERMLRAKIRELQRYRRNGITKTEESAEYEAARH 313
Query: 393 GREAEEASR---RAKEGGHAGASSQGGANVFMASESLRKDSNSNSRPSGQASSSHVNDLY 449
RE + ++ +K G G S+ F A E+L
Sbjct: 314 KREKRKENKNIANSKRGREDGKESE-----FAAIENL----------------------- 345
Query: 450 IMGFNETQLLSEAEKRLCCEIRLAPPLYLRMQEVMSRE 487
GF +LLS+ EK LC + L+P YL ++ ++ ++
Sbjct: 346 -AGF---ELLSDREKVLCSSLNLSPTRYLTVKTIIIKD 379
>sp|Q5RBN9|TAD2B_PONAB Transcriptional adapter 2-beta OS=Pongo abelii GN=TADA2B PE=2 SV=1
Length = 420
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/458 (24%), Positives = 194/458 (42%), Gaps = 104/458 (22%)
Query: 48 HCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSFPLICPD- 106
+C YC +++ +R +C C D +LC ECFS G E+ H+ H Y+++D F L P+
Sbjct: 8 YCVYCLAEVS-PLRFRCTECQDIELCPECFSAGAEIGHHRRYHGYQLVDGGRFTLWGPEA 66
Query: 107 ---WNADDEILLLEGIEMYGLGNWAEIAEHVG-TKTKELCIEHYTNVYMNSPFFP--LPD 160
W + +E LLL+ IE +G GNW ++A HVG ++T + +EHY ++Y++ +PD
Sbjct: 67 EGGWTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEHYVSMYIHGNLGKACIPD 126
Query: 161 MSHVVGKNRKELLAMAKGHIDDKKVAVAGPSKPGEATVKEESPFSPSRVKIEEMHKVGPS 220
+ D GP P T P P + + E ++
Sbjct: 127 --------------TIPNRVTDHTCPSGGPLSPSLTT-----PLPPLDISVAEQQQL--- 164
Query: 221 GRGLNADPQTERSSKGKKPVTSGNDGPSLVELSGYNSKRQEFDPEYDNDAEQLLAEMEFK 280
GY R +++ EYD DAE L++ +
Sbjct: 165 ---------------------------------GYMPLRDDYEIEYDQDAETLISGLSVN 191
Query: 281 DADSEEERDIKLRVLRIYSKRLDERKRRKDFILERNLLYPNPFEKD-----------LSP 329
D + E ++K + +Y ++L ER+RRK+ + NL+ P KD ++
Sbjct: 192 YDDDDVEIELKRAHVDMYVRKLKERQRRKNIARDYNLV-PAFLGKDKKEKEKALKRKITK 250
Query: 330 EERELCRRYDVFMRFHSKEDHEDLLQTVISEHRTLKRIQDLKEARAAGCRTSAEADRYLE 389
EE+EL + +F S ++ +DL + + E +I++L+ R G E+ Y
Sbjct: 251 EEKELRLKLRPLYQFMSCKEFDDLFENMHKEKMLRAKIRELQRYRRNGITKMEESAEYEA 310
Query: 390 LKRGREAEEASRRAKEGGHAGASSQGGANVFMASESLRKDSNSNSRPSGQASSSHVNDLY 449
+ RE + ++ G G + F A E+L
Sbjct: 311 ARHKREKRKENKNL--AGSKRGKEDGKDSEFAAIENL----------------------- 345
Query: 450 IMGFNETQLLSEAEKRLCCEIRLAPPLYLRMQEVMSRE 487
GF +LLS+ EK LC + L+P Y+ ++ ++ ++
Sbjct: 346 -PGF---ELLSDREKVLCSSLNLSPARYVTVKTIIIKD 379
>sp|Q86TJ2|TAD2B_HUMAN Transcriptional adapter 2-beta OS=Homo sapiens GN=TADA2B PE=1 SV=2
Length = 420
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/458 (24%), Positives = 194/458 (42%), Gaps = 104/458 (22%)
Query: 48 HCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSFPLICPD- 106
+C YC +++ +R +C C D +LC ECFS G E+ H+ H Y+++D F L P+
Sbjct: 8 YCVYCLAEVS-PLRFRCTECQDIELCPECFSAGAEIGHHRRYHGYQLVDGGRFTLWGPEA 66
Query: 107 ---WNADDEILLLEGIEMYGLGNWAEIAEHVG-TKTKELCIEHYTNVYMNSPFFP--LPD 160
W + +E LLL+ IE +G GNW ++A HVG ++T + +EHY ++Y++ +PD
Sbjct: 67 EGGWTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEHYVSMYIHGNLGKACIPD 126
Query: 161 MSHVVGKNRKELLAMAKGHIDDKKVAVAGPSKPGEATVKEESPFSPSRVKIEEMHKVGPS 220
+ D GP P T P P + + E ++
Sbjct: 127 --------------TIPNRVTDHTCPSGGPLSPSLTT-----PLPPLDISVAEQQQL--- 164
Query: 221 GRGLNADPQTERSSKGKKPVTSGNDGPSLVELSGYNSKRQEFDPEYDNDAEQLLAEMEFK 280
GY R +++ EYD DAE L++ +
Sbjct: 165 ---------------------------------GYMPLRDDYEIEYDQDAETLISGLSVN 191
Query: 281 DADSEEERDIKLRVLRIYSKRLDERKRRKDFILERNLLYPNPFEKD-----------LSP 329
D + E ++K + +Y ++L ER+RRK+ + NL+ P KD ++
Sbjct: 192 YDDDDVEIELKRAHVDMYVRKLKERQRRKNIARDYNLV-PAFLGKDKKEKEKALKRKITK 250
Query: 330 EERELCRRYDVFMRFHSKEDHEDLLQTVISEHRTLKRIQDLKEARAAGCRTSAEADRYLE 389
EE+EL + +F S ++ +DL + + E +I++L+ R G E+ Y
Sbjct: 251 EEKELRLKLRPLYQFMSCKEFDDLFENMHKEKMLRAKIRELQRYRRNGITKMEESAEYEA 310
Query: 390 LKRGREAEEASRRAKEGGHAGASSQGGANVFMASESLRKDSNSNSRPSGQASSSHVNDLY 449
+ RE + ++ G G + F A E+L
Sbjct: 311 ARHKREKRKENKNL--AGSKRGKEDGKDSEFAAIENL----------------------- 345
Query: 450 IMGFNETQLLSEAEKRLCCEIRLAPPLYLRMQEVMSRE 487
GF +LLS+ EK LC + L+P Y+ ++ ++ ++
Sbjct: 346 -PGF---ELLSDREKVLCSSLNLSPARYVTVKTIIIKD 379
>sp|Q8I8V0|TAD2B_DROME Transcriptional adapter 2B OS=Drosophila melanogaster GN=Ada2b PE=1
SV=1
Length = 555
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 154/351 (43%), Gaps = 61/351 (17%)
Query: 47 YHCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSFPLIC-- 104
Y+C C DI G IR+ CA C +FDLC++CF+ G E+ H++NH Y+ MD + L
Sbjct: 11 YNCTNCQDDIQG-IRVHCAECENFDLCLQCFAAGAEIGAHQNNHSYQFMDTGTSILSVFR 69
Query: 105 --PDWNADDEILLLEGIEMYGLGNWAEIAEHVGTKTKELCIEHYTNVYMNSPFFPLPDMS 162
W A +EI LL+ IE YG GNW +I++H+ TK+ E E Y N ++N
Sbjct: 70 GKGAWTAREEIRLLDAIEQYGFGNWEDISKHIETKSAEDAKEEYVNKFVNG--------- 120
Query: 163 HVVGKNRKELLAMAKGHIDDKKVAVAGPSKPGEATVKEESPFSPSRVKIEEMHKVGPSGR 222
+G+ + + D G G S P + +E ++G
Sbjct: 121 -TIGRATWTPAQSQRPRLIDH----TGDDDAGPLGTNALSTLPPLEINSDEAMQLG---- 171
Query: 223 GLNADPQTERSSKGKKPVTSGNDGPSLVELSGYNSKRQEFDPEYDNDAEQLLAEMEFKDA 282
Y R F+ EYD AEQL++ +
Sbjct: 172 --------------------------------YMPNRDSFEREYDPTAEQLISNISLSSE 199
Query: 283 DSEEERDIKLRVLRIYSKRLDERKRR----KDFILERNLLYPNPF--EKDLSPEERELCR 336
D+E + +KL + IY++RL ER RR +D+ L N + ++ L+ E+RE
Sbjct: 200 DTEVDVMLKLAHVDIYTRRLRERARRKRMVRDYQLVSNFFRNRNYAQQQGLTKEQREFRD 259
Query: 337 RYDVFMRFHSKEDHEDLLQTVISEHRTLKRIQDLKEARAAGCRTSAEADRY 387
R+ V+ +F++ ++E LL ++ E R +L R G AE +
Sbjct: 260 RFRVYAQFYTCNEYERLLGSLEREKELRIRQSELYRYRYNGLTKIAECTHF 310
>sp|Q503N9|TAD2B_DANRE Transcriptional adapter 2-beta OS=Danio rerio GN=tada2b PE=2 SV=1
Length = 486
Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 131/293 (44%), Gaps = 64/293 (21%)
Query: 48 HCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSFPLICPD- 106
+C C D+T +RI+CA C D +LC ECFS G E+ H+ H Y+ +D F L P+
Sbjct: 8 YCVNCLADVTN-LRIRCAECQDIELCPECFSAGAEIGNHRRWHGYQQVDGGRFSLWGPEA 66
Query: 107 ---WNADDEILLLEGIEMYGLGNWAEIAEHVG-TKTKELCIEHYTNVYMNSPFFP--LPD 160
W + +E LL+ IE YG GNW ++A HVG ++T + ++HY ++Y++ +PD
Sbjct: 67 EGGWTSREEQSLLDAIEQYGFGNWEDMAAHVGASRTPQEVMDHYVSMYIHGNLGKACIPD 126
Query: 161 MSHVVGKNRKELLAMAKGHIDDKKVAVAGPSKPGEATVKEESPFSPSRVKIEEMHKVGPS 220
+ D GP P T P P + + E ++
Sbjct: 127 --------------SIPNRVTDHTCPSGGPLSPSLTT-----PLPPLDITVVEQQQL--- 164
Query: 221 GRGLNADPQTERSSKGKKPVTSGNDGPSLVELSGYNSKRQEFDPEYDNDAEQLLAEMEFK 280
GY R +++ EYD +AE+L++ +
Sbjct: 165 ---------------------------------GYMPLRDDYEIEYDQEAEKLISGLSVN 191
Query: 281 DADSEEERDIKLRVLRIYSKRLDERKRRKDFILERNLLYPNPFEKDLSPEERE 333
D + E ++K + +Y ++L ER+RRK+ + NL+ P +D +ERE
Sbjct: 192 YDDEDIEIEMKRAHVDMYVRKLRERQRRKNIARDYNLV-PAFLGRDKKDKERE 243
>sp|Q7KSD8|TAD2A_DROME Transcriptional adapter 2A OS=Drosophila melanogaster GN=Rpb4 PE=1
SV=1
Length = 562
Score = 109 bits (273), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 123/513 (23%), Positives = 202/513 (39%), Gaps = 95/513 (18%)
Query: 49 CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVM-DNLSFPLICPDW 107
C C +T IKC+ C D LC++CFS G E H++NH Y ++ DN+ P W
Sbjct: 96 CATCRCSLTEPY-IKCSECLDTLLCLQCFSRGKEAFSHRNNHAYIIVRDNIQVFADEPHW 154
Query: 108 NADDEILLLEGIEMYGLGNWAEIAEHVGTKTKELCI-EHYTNVYMNSPFFPLPDMSHVVG 166
A DE +LL+ + +G GNW +++ + + + + HY + Y F L ++ H
Sbjct: 155 TARDERILLKTLRTHGYGNWEAVSQALDQRHEPAEVRRHYHDCYFGGIFERLLNLKHA-- 212
Query: 167 KNRKELLAMAKGHIDDKKVAVAGPSKPGEATVKEESPFSPSRVKIEEMHKVGPSGRGLNA 226
++ V E P+ + +M + P A
Sbjct: 213 ---------------------------RDSYVPERMPY------VFKMRSLDPPRHDDIA 239
Query: 227 DPQTERSSKGKKPVTSGNDGPSLVELSGYNSKRQEFDPEYDNDAEQLLAEM--------E 278
Q S +GY R +FD YD AE LL+ M +
Sbjct: 240 SMQFRLS-------------------AGYRCARGDFDTPYDTSAESLLSIMVDHRGRDDD 280
Query: 279 FKDADSEEERDI----KLRVLRIYSKRLDERKRRKDFILERNLLYPNPFEKDLSPEEREL 334
+ ++SE ER++ +L ++R Y+ RL ER+RR + + L+ PN +S
Sbjct: 281 NEASESEFEREVTEELQLGLVRAYNNRLRERQRRYKIMRQHGLIMPNRTVSWISKYVHAF 340
Query: 335 -----CRRYDVFMRFHSKEDHEDLLQTVISEHRTL-KRIQDLKEARAAGCRTSAEADRYL 388
C R+ FM+ D+L + +R L ++ L + R G RT + A Y
Sbjct: 341 GSDASCMRFLGFMQICPDPIKFDMLLESLRYYRELHSQLHKLYDLREHGVRTLSGAKLYA 400
Query: 389 ELKRGR-EAEEASRRAK--------------EGGHAGASSQGGANVFMASESLRKDSNSN 433
L + R +A+ R K E +G N + + R+ ++
Sbjct: 401 RLSKERQQAQRDYSRLKQTDAFDWQQLVQHYESNRSGDPGPLAINSKLYVMNTRRKASPI 460
Query: 434 SRPSGQ-----ASSSHVNDLYIMGFNETQLLSEAEKRLCCEIRLAPPLYLRMQEVMSREI 488
G+ + + N I L + E++LC RL P YL + + E
Sbjct: 461 EIGGGKHFTHCLTPTEYNFSLIPDLPGYSKLDDGERKLCSVARLVPQSYLDYKNQLVTEQ 520
Query: 489 FSGNVNNKADAHHLFKIEPSKIDRVYDMLVKKG 521
ADA L KI+ +K ++YD L++ G
Sbjct: 521 AKLGYLRLADARRLIKIDVNKTRQIYDFLLEHG 553
>sp|Q8CHV6|TAD2A_MOUSE Transcriptional adapter 2-alpha OS=Mus musculus GN=Tada2a PE=1 SV=1
Length = 443
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 67/110 (60%), Gaps = 4/110 (3%)
Query: 49 CNYCNKDITGKIRIKCAVC--PDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSFPLICPD 106
C C+ +T IKCA C P F LC++CF+ G E H+S+H Y +M + FP++ P
Sbjct: 17 CRGCSSYLTEPY-IKCAECGPPPFFLCLQCFTRGFEYKKHQSDHTYEIMTS-DFPVLDPS 74
Query: 107 WNADDEILLLEGIEMYGLGNWAEIAEHVGTKTKELCIEHYTNVYMNSPFF 156
W A +E+ LLE + G GNW ++A + TKTKE C +HY ++N+P F
Sbjct: 75 WTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYMKHFINNPLF 124
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 134/297 (45%), Gaps = 17/297 (5%)
Query: 239 PVTSGNDGP-----SLV--ELSGYNSKRQEFDPEYDNDAEQLLAEMEFKDADSEEERDIK 291
P S +D P SL+ +++GY R +F E+DN AE L +++F + DS+ +K
Sbjct: 145 PFHSADDPPRPAFDSLLSRDMAGYMPARADFIEEFDNYAEWDLRDIDFVEDDSDILHALK 204
Query: 292 LRVLRIYSKRLDERKRRKDFILERNLLYPNPF---EKDLSPEERELCRRYDVFMRFHSKE 348
+ V+ IY RL ER+RRK I + L+ F E+ E ++L F R
Sbjct: 205 MAVVDIYHSRLKERQRRKKIIRDHGLVNLRKFRLMERRYPKEVQDLYETMRRFARIVGPV 264
Query: 349 DHEDLLQTVISEHRTLKRIQDLKEARAAGCRTSAEADRYLELKRGREAEEASRRAKEGGH 408
+H+ +++ E + I+ L+E R AG A Y LK+ RE E R
Sbjct: 265 EHDKFIESHALEFELRREIKRLQEYRTAGITNFCSARTYDHLKKTREEERLKRTMLSEVL 324
Query: 409 AGASSQGGANVFMASESLRKDSNSNSRPSGQASSS----HVNDLYIMGFNETQLLSEAEK 464
++ ++ D +S PS +S+ L + G T+ L+E EK
Sbjct: 325 QYIQDSSACQQWLRRQA---DIDSGLSPSVLMASNSGRRSAPPLNLTGLPGTEKLNEKEK 381
Query: 465 RLCCEIRLAPPLYLRMQEVMSREIFSGNVNNKADAHHLFKIEPSKIDRVYDMLVKKG 521
LC +RL P YL + + E A A L KI+ +K ++YD L+++G
Sbjct: 382 ELCQVVRLVPGAYLEYKSALLNECHKQGGLRLAQARALIKIDVNKTRKIYDFLIREG 438
>sp|Q5ZJF3|TAD2A_CHICK Transcriptional adapter 2-alpha OS=Gallus gallus GN=TADA2A PE=2
SV=1
Length = 446
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 68/110 (61%), Gaps = 4/110 (3%)
Query: 49 CNYCNKDITGKIRIKCAVC--PDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSFPLICPD 106
C C+ +T +KCA C P F LC++CF+ G E H+S+H Y +M + FP++ P+
Sbjct: 17 CRGCSSYLTEPY-VKCAECGPPPFLLCLQCFTRGFEYKKHQSDHTYEIMTS-DFPVLDPN 74
Query: 107 WNADDEILLLEGIEMYGLGNWAEIAEHVGTKTKELCIEHYTNVYMNSPFF 156
W A +E+ LLE + G GNW ++A + TK+KE C +HY ++N+P F
Sbjct: 75 WTAQEEMALLEAVMDCGFGNWQDVANQMCTKSKEECEKHYMKHFINNPLF 124
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 123/284 (43%), Gaps = 19/284 (6%)
Query: 251 ELSGYNSKRQEFDP-EYDNDAEQLLAEMEFKDADSEEERDIKLRVLRIYSKRLDERKR-- 307
+++GY R +DN AE L +++F + DS+ +K+ V+ IY R K
Sbjct: 164 DMAGYMPARARLSSRSFDNYAEWDLRDIDFVEDDSDILHALKIAVVDIYHSRFKREKTAG 223
Query: 308 RKDFILERNLLYPNPF---EKDLSPEERELCRRYDVFMRFHSKEDHEDLLQTVISEHRTL 364
RK I + L+ F E+ E ++L F R +H+ +++ E
Sbjct: 224 RKKIIRDHGLINLRKFQILERRYPKEVQDLYETMRRFARILGPVEHDKFIESHALEFELR 283
Query: 365 KRIQDLKEARAAGCRTSAEADRYLELKRGREAEEASRRAKEGGHAGASSQGGANVFMASE 424
+ I+ L+E RAAG A Y LK+ R+ E R +++ +
Sbjct: 284 REIKRLQEYRAAGITNFCSARTYDHLKKTRDEERLKRTMLSEVLQYIQDSSACQQWLSRQ 343
Query: 425 SLRKDSNSNSRP-------SGQASSSHVNDLYIMGFNETQLLSEAEKRLCCEIRLAPPLY 477
+ D +S P SG+ S+ +N + G T+ L+E EK LC +RL P Y
Sbjct: 344 A---DIDSGPTPAAPIPSNSGRRSAPPLN---LTGLPGTEKLNEKEKELCQMVRLVPGAY 397
Query: 478 LRMQEVMSREIFSGNVNNKADAHHLFKIEPSKIDRVYDMLVKKG 521
L + + E A A L KI+ +K ++YD L+++G
Sbjct: 398 LEYKAALVNECNKQGGLRLAQARALIKIDVNKTRKIYDFLIREG 441
>sp|Q8VY05|SWI3D_ARATH SWI/SNF complex subunit SWI3D OS=Arabidopsis thaliana GN=SWI3D PE=1
SV=3
Length = 985
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 68/150 (45%), Gaps = 6/150 (4%)
Query: 41 EGKRALYHCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSF 100
EG YHCN C+ D + K R C DFDLC ECF+ G S+ +M+
Sbjct: 302 EGPAVEYHCNSCSADCSRK-RYHCPKQADFDLCTECFNSGKFSSDMSSSDFI-LMEPAEA 359
Query: 101 PLICPDWNADDEILLLEGIEMYGLGNWAEIAEHVGTKTKELCIEHYTNVYMNSPFFPLPD 160
P + D E LLL NW EIAEHV TKTK C+ H+ + + F D
Sbjct: 360 PGVGSGKWTDQETLLLLEALEIFKENWNEIAEHVATKTKAQCMLHFLQMPIEDAFLDQID 419
Query: 161 MSHVVGKNRKELLAMAKGHIDDKKVAVAGP 190
+ K+ + LA++K DD V P
Sbjct: 420 YKDPISKDTTD-LAVSK---DDNSVLKDAP 445
>sp|Q9XI07|SWI3C_ARATH SWI/SNF complex subunit SWI3C OS=Arabidopsis thaliana GN=SWI3C PE=1
SV=1
Length = 807
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 48 HCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSF--PLICP 105
HCN+C++ + + + D LC +CF G V H RV D + F
Sbjct: 344 HCNHCSRPLP-TVYFQSQKKGDILLCCDCFHHGRFVVGHSCLDFVRV-DPMKFYGDQDGD 401
Query: 106 DWNADDEILLLEGIEMYGLGNWAEIAEHVGTKTKELCIEHY 146
+W + +LLLE +E+Y NW +IA+HVG+K+K CI H+
Sbjct: 402 NWTDQETLLLLEAVELYN-ENWVQIADHVGSKSKAQCILHF 441
>sp|O14470|SSR2_SCHPO SWI/SNF and RSC complexes subunit ssr2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ssr2 PE=1 SV=3
Length = 503
Score = 52.4 bits (124), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 107 WNADDEILLLEGIEMYGLGNWAEIAEHVGTKTKELCIEHYTNVYMNSPF 155
W+ + +LLLE IE YG +W +IA HVG++TKE C+ H+ + + P+
Sbjct: 250 WSNQETLLLLEAIETYG-DDWNQIALHVGSRTKEQCLIHFLQIPIEDPY 297
>sp|Q54J55|MYBX_DICDI Myb-like protein X OS=Dictyostelium discoideum GN=mybX PE=3 SV=1
Length = 1620
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 24/152 (15%)
Query: 43 KRALYHCNYCNKD--------ITGKIRIKCAVCPDF----DLCIECFSVGVEVHPHKSNH 90
K+ L+ C C D + + + P++ +C+ CFS G + +S+
Sbjct: 857 KKPLFECKKCKADCSNVRYQLVNNSTALDGNILPEYFYPMIICVNCFSSGNYENFIQSSS 916
Query: 91 PYRVMDNLSFPLICPDWNADDEILLLEGIEMYGLGNWAEIAEHVG-TKTKELCIEHYTNV 149
R+ + W + +LLLEGIE++ NW EI++++G +KT E C+ H+ +
Sbjct: 917 FQRIEQHQPEEF---GWTDIETLLLLEGIEIFR-DNWQEISDYIGGSKTPEQCLTHFIRL 972
Query: 150 YMNSPFFPLPDMSHVVGKNRKELLAMAKGHID 181
+ F S VG +++K ID
Sbjct: 973 PIEDEFLERKISSFPVG-------SLSKKEID 997
>sp|O13788|SSR1_SCHPO SWI/SNF and RSC complexes subunit ssr1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ssr1 PE=1 SV=1
Length = 527
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 13/107 (12%)
Query: 48 HCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSFPL---IC 104
HC YC + + + +++CI C+ ++ P + D + I
Sbjct: 236 HC-YCCGNKFNESYYQSQTAQKYNVCISCY------QQNRFPSPTTIADYKEVAIQNKIE 288
Query: 105 PD--WNADDEILLLEGIEMYGLGNWAEIAEHVGTKTKELCIEHYTNV 149
D W A + +LL EG+EMY +WA++A HV TK+ E CI + N+
Sbjct: 289 DDDTWTAQELVLLSEGVEMYS-DDWAKVASHVNTKSVEECILKFLNL 334
>sp|Q9C5X9|HAC1_ARATH Histone acetyltransferase HAC1 OS=Arabidopsis thaliana GN=HAC1 PE=1
SV=2
Length = 1697
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 49 CNYCNKDITGKIRIKCAVCPDFDLCIECFSV-GVEVHPHK-SNHP 91
CN C+ DI +C VCPD+D+C CFS G HPHK +NHP
Sbjct: 1524 CNACHLDIETGQGWRCEVCPDYDVCNACFSRDGGVNHPHKLTNHP 1568
>sp|P43609|RSC8_YEAST Chromatin structure-remodeling complex protein RSC8
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=RSC8 PE=1 SV=1
Length = 557
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 46 LYHCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSFPLICP 105
+Y C+ C + + +R D +LC CF G +S+ R+ +N + +
Sbjct: 257 VYICHTCGNE-SINVRYHNLRARDTNLCSRCFQEGHFGANFQSSDFIRLENNGNS--VKK 313
Query: 106 DWNADDEILLLEGIEMYGLGNWAEIAEHVGT-KTKELCIEHYTNV 149
+W+ + +LLLEGIEMY W +IA+HVG K E CIE + ++
Sbjct: 314 NWSDQEMLLLLEGIEMYE-DQWEKIADHVGGHKRVEDCIEKFLSL 357
>sp|Q9FWQ5|HAC12_ARATH Histone acetyltransferase HAC12 OS=Arabidopsis thaliana GN=HAC12 PE=2
SV=2
Length = 1706
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 49 CNYCNKDITGKIRIKCAVCPDFDLCIECFSV-GVEVHPHK-SNHP 91
CN C+ DI + +C VCPD+D+C C+ G HPHK + HP
Sbjct: 1533 CNVCHLDIESGLGWRCEVCPDYDVCNACYKKEGCINHPHKLTTHP 1577
>sp|Q869R9|MYBJ_DICDI Myb-like protein J OS=Dictyostelium discoideum GN=mybJ PE=3 SV=1
Length = 734
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 107 WNADDEILLLEGIEMYGLGNWAEIAEHVGTKTKELCIEHYTNVYM 151
W ++ I L GI+++G G W EIA+ VGT+T H Y+
Sbjct: 379 WTKEEHIRFLNGIQIHGKGAWKEIAQFVGTRTPTQIQSHAQKYYL 423
>sp|Q54QG5|Y3893_DICDI Probable E3 ubiquitin-protein ligase DDB_G0283893 OS=Dictyostelium
discoideum GN=DDB_G0283893 PE=3 SV=2
Length = 5875
Score = 42.7 bits (99), Expect = 0.007, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 10 ANDEDPTQRSRRKKNVSSDNSDTAAPG--QGAGEGKRALYHCNYCNKD-ITGKIRIKCAV 66
AN P S + V +DN++ G Q E L+ C+ CN + ITGK R C+
Sbjct: 3193 ANLLPPPSSSSNENVVDNDNTNKENEGDIQMVDE---VLFSCDLCNINPITGK-RWNCSN 3248
Query: 67 CPDFDLCIECFSVGVEVHP 85
C DFDLC +C+ + HP
Sbjct: 3249 CGDFDLCNQCYQNPEKDHP 3267
>sp|Q84JG2|SWI3B_ARATH SWI/SNF complex subunit SWI3B OS=Arabidopsis thaliana GN=SWI3B PE=1
SV=1
Length = 469
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 24/117 (20%)
Query: 48 HCNYCNKDITGKIRIKCAVCPDFDL--CIECFSVGVEVHPHKSNHPYRVMDNLS-FPLI- 103
+CN C I C C +DL C C+ +SN YRV N S F +
Sbjct: 174 NCNGCK----AICSIACFACDKYDLTLCARCYV--------RSN--YRVGINSSEFKRVE 219
Query: 104 -----CPDWNADDEILLLEGIEMYGLGNWAEIAEHVGTKTKELCIEHYTNVYMNSPF 155
P+W+ + +LLLE + YG +W ++A HV +T++ C+ + + F
Sbjct: 220 ISEESKPEWSDKEILLLLEAVMHYG-DDWKKVASHVIGRTEKDCVSQFVKLPFGEQF 275
>sp|Q9P0J7|KCMF1_HUMAN E3 ubiquitin-protein ligase KCMF1 OS=Homo sapiens GN=KCMF1 PE=1
SV=2
Length = 381
Score = 42.4 bits (98), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 49 CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYR-VMDNLSFPL 102
C+ C K R KC +C D+DLC C+ G H ++HP + ++ + F L
Sbjct: 9 CDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPMQCILTRVDFDL 63
>sp|Q1LZE1|KCMF1_BOVIN E3 ubiquitin-protein ligase KCMF1 OS=Bos taurus GN=KCMF1 PE=2 SV=1
Length = 381
Score = 42.4 bits (98), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 49 CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYR-VMDNLSFPL 102
C+ C K R KC +C D+DLC C+ G H ++HP + ++ + F L
Sbjct: 9 CDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPMQCILTRVDFDL 63
>sp|Q80UY2|KCMF1_MOUSE E3 ubiquitin-protein ligase KCMF1 OS=Mus musculus GN=Kcmf1 PE=2
SV=1
Length = 381
Score = 42.4 bits (98), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 49 CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYR-VMDNLSFPL 102
C+ C K R KC +C D+DLC C+ G H ++HP + ++ + F L
Sbjct: 9 CDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPMQCILTRVDFDL 63
>sp|Q5RBA5|SQSTM_PONAB Sequestosome-1 OS=Pongo abelii GN=SQSTM1 PE=2 SV=1
Length = 440
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 15/67 (22%)
Query: 39 AGEGKRALYH----CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRV 94
A E R + H C+ CN + G R KC+VCPD+DLC C G+ +R
Sbjct: 114 AQEAPRNMVHPNVICDGCNGPVVG-TRYKCSVCPDYDLCSVCEGKGL----------HRG 162
Query: 95 MDNLSFP 101
L+FP
Sbjct: 163 HTKLAFP 169
>sp|Q64337|SQSTM_MOUSE Sequestosome-1 OS=Mus musculus GN=Sqstm1 PE=1 SV=1
Length = 442
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
Query: 39 AGEGKRALYH----CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGV 81
A E R + H C+ CN + G R KC+VCPD+DLC C G+
Sbjct: 114 AQEAPRNMVHPNVICDGCNGPVVG-TRYKCSVCPDYDLCSVCEGKGL 159
>sp|Q13501|SQSTM_HUMAN Sequestosome-1 OS=Homo sapiens GN=SQSTM1 PE=1 SV=1
Length = 440
Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 15/67 (22%)
Query: 39 AGEGKRALYH----CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRV 94
A E R + H C+ CN + G R KC+VCPD+DLC C G+ +R
Sbjct: 114 AQEAPRNMVHPNVICDGCNGPVVG-TRYKCSVCPDYDLCSVCEGKGL----------HRG 162
Query: 95 MDNLSFP 101
L+FP
Sbjct: 163 HTKLAFP 169
>sp|Q6GPB6|KCMF1_XENLA E3 ubiquitin-protein ligase KCMF1 OS=Xenopus laevis GN=kcmf1 PE=2
SV=1
Length = 381
Score = 42.0 bits (97), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 49 CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYR-VMDNLSFPL 102
C+ C K R KC +C D+DLC C+ G H ++HP + ++ + F L
Sbjct: 9 CDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPMQCILTRVDFDL 63
>sp|Q9VDW3|DMDB_DROME Dystrophin, isoform B OS=Drosophila melanogaster GN=Dys PE=1 SV=3
Length = 1669
Score = 42.0 bits (97), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 49 CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHP 91
CN C + R +C C +FD+C +CF G HK HP
Sbjct: 1284 CNICKEYPIVGFRYRCLKCFNFDMCQKCFFFGRNAKNHKLTHP 1326
>sp|Q8BP86|SNPC4_MOUSE snRNA-activating protein complex subunit 4 OS=Mus musculus
GN=Snapc4 PE=2 SV=2
Length = 1333
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 93 RVMDNLSFPLICPDWNADDEILLLEGIEMYGLGNWAEIAEHVGTKTKELCIEHY 146
R + L F L WNA +E L++ IE YG+G+WA IA + ++ C+ +
Sbjct: 442 RYIRRLHFSLKKGRWNAKEEQQLIQLIEKYGVGHWARIASELPHRSGSQCLSKW 495
>sp|Q9LE42|HAC5_ARATH Histone acetyltransferase HAC5 OS=Arabidopsis thaliana GN=HAC5 PE=2
SV=1
Length = 1670
Score = 41.6 bits (96), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 49 CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPH 86
C C +++ +C VCPD+D+C C+S G+ HPH
Sbjct: 1504 CAICQQELETAQGWRCEVCPDYDVCNACYSKGIN-HPH 1540
>sp|Q9VDW6|DMDA_DROME Dystrophin, isoforms A/C/F/G/H OS=Drosophila melanogaster GN=Dys PE=1
SV=3
Length = 3598
Score = 41.6 bits (96), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 49 CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHP 91
CN C + R +C C +FD+C +CF G HK HP
Sbjct: 3112 CNICKEYPIVGFRYRCLKCFNFDMCQKCFFFGRNAKNHKLTHP 3154
>sp|Q0KI50|DMDD_DROME Dystrophin, isoform D OS=Drosophila melanogaster GN=Dys PE=1 SV=1
Length = 1854
Score = 41.6 bits (96), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 49 CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHP 91
CN C + R +C C +FD+C +CF G HK HP
Sbjct: 1469 CNICKEYPIVGFRYRCLKCFNFDMCQKCFFFGRNAKNHKLTHP 1511
>sp|O08623|SQSTM_RAT Sequestosome-1 OS=Rattus norvegicus GN=Sqstm1 PE=1 SV=1
Length = 439
Score = 41.2 bits (95), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 5/42 (11%)
Query: 44 RALYH----CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGV 81
R++ H C+ CN + G R KC+VCPD+DLC C G+
Sbjct: 116 RSMVHPNVICDGCNGPVVG-TRYKCSVCPDYDLCSVCEGKGL 156
>sp|Q7T321|KCMF1_DANRE E3 ubiquitin-protein ligase KCMF1 OS=Danio rerio GN=kcmf1 PE=2
SV=1
Length = 383
Score = 40.8 bits (94), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 49 CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVM 95
C+ C K R KC +C D+DLC C+ G H + HP + +
Sbjct: 9 CDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTEHPMQCI 55
>sp|Q7YU29|DMDE_DROME Dystrophin, isoform E OS=Drosophila melanogaster GN=Dys PE=1 SV=1
Length = 1051
Score = 40.8 bits (94), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 49 CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHP 91
CN C + R +C C +FD+C +CF G HK HP
Sbjct: 666 CNICKEYPIVGFRYRCLKCFNFDMCQKCFFFGRNAKNHKLTHP 708
>sp|Q9TW65|DMD_CAEEL Dystrophin-1 OS=Caenorhabditis elegans GN=dys-1 PE=1 SV=2
Length = 3674
Score = 40.4 bits (93), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 21/45 (46%)
Query: 49 CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYR 93
CN C IR +C C + DLC CF H++NHP +
Sbjct: 3306 CNVCKMFPIIGIRYRCLTCFNCDLCQNCFFSQRTAKSHRTNHPMQ 3350
>sp|Q5SSH7|ZZEF1_MOUSE Zinc finger ZZ-type and EF-hand domain-containing protein 1 OS=Mus
musculus GN=Zzef1 PE=1 SV=2
Length = 2924
Score = 40.0 bits (92), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 47 YHCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNH 90
+ C++C I G+ R+ C VC DFDLC C++ + H H
Sbjct: 1828 FTCDHCQGLIIGR-RMNCNVCDDFDLCYGCYTAKKYSYGHLPTH 1870
Score = 34.3 bits (77), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 49 CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSF 100
C+ C+ +I R +C C D DLC CF GV+ H +H M N+ F
Sbjct: 1781 CDGCD-EIAPWHRYRCLQCSDMDLCKTCFLGGVKPEGHGDDHE---MVNMEF 1828
>sp|O43149|ZZEF1_HUMAN Zinc finger ZZ-type and EF-hand domain-containing protein 1 OS=Homo
sapiens GN=ZZEF1 PE=1 SV=6
Length = 2961
Score = 39.7 bits (91), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 47 YHCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNH 90
+ C++C I G+ R+ C VC DFDLC C++ + H H
Sbjct: 1830 FTCDHCQGLIIGR-RMNCNVCDDFDLCYGCYAAKKYSYGHLPTH 1872
Score = 33.9 bits (76), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 49 CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSF 100
C+ C+ +I R +C C D DLC CF GV+ H +H M N+ F
Sbjct: 1783 CDGCD-EIAPWHRYRCLQCSDMDLCKTCFLGGVKPEGHGDDHE---MVNMEF 1830
>sp|Q9SRU2|BIG_ARATH Auxin transport protein BIG OS=Arabidopsis thaliana GN=BIG PE=1 SV=2
Length = 5098
Score = 39.7 bits (91), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Query: 47 YHCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVH----PHKSNHP 91
Y C+ C+ + R C VCPDFDLC C+ V ++ PH +HP
Sbjct: 2616 YCCDGCSTVPILRRRWHCTVCPDFDLCEACYEV-LDADRLPPPHTRDHP 2663
>sp|A2CJ06|DYTN_HUMAN Dystrotelin OS=Homo sapiens GN=DYTN PE=2 SV=1
Length = 578
Score = 39.7 bits (91), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 49 CNYCNK-DITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHP 91
C C ITG +R +C C +FD+C CF G+ H+ +HP
Sbjct: 228 CTLCRTFPITG-LRYRCLKCLNFDICQMCFLSGLHSKSHQKSHP 270
>sp|Q92793|CBP_HUMAN CREB-binding protein OS=Homo sapiens GN=CREBBP PE=1 SV=3
Length = 2442
Score = 38.9 bits (89), Expect = 0.090, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Query: 44 RALYHCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHK 87
R +Y CN C + + R C VC D+DLCI C++ + H HK
Sbjct: 1702 RFVYTCNECKHHV--ETRWHCTVCEDYDLCINCYN--TKSHAHK 1741
>sp|P45481|CBP_MOUSE CREB-binding protein OS=Mus musculus GN=Crebbp PE=1 SV=3
Length = 2441
Score = 38.9 bits (89), Expect = 0.096, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Query: 44 RALYHCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHK 87
R +Y CN C + + R C VC D+DLCI C++ + H HK
Sbjct: 1703 RFVYTCNECKHHV--ETRWHCTVCEDYDLCINCYN--TKSHTHK 1742
>sp|B9G2A8|BIG_ORYSJ Auxin transport protein BIG OS=Oryza sativa subsp. japonica
GN=Os09g0247700 PE=2 SV=1
Length = 4965
Score = 38.9 bits (89), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
Query: 10 ANDEDPTQRSRRKKNVSSDNSDTAAPGQGAGEGKRALYHCNYCNKDITGKIRIKCAVCPD 69
AND+ P ++ +S + + Y C+ C+ + R C +CPD
Sbjct: 2435 ANDDAPDNHAKASAASNSTTGNAQVMIEEDPATSSVQYCCDGCSTVPILRRRWHCNICPD 2494
Query: 70 FDLCIECFSVGVEV----HPHKSNHP 91
FDLC C+ + ++ PH +HP
Sbjct: 2495 FDLCETCYEI-LDADRLPAPHSRDHP 2519
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.133 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 204,789,418
Number of Sequences: 539616
Number of extensions: 9154949
Number of successful extensions: 25423
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 161
Number of HSP's that attempted gapping in prelim test: 24936
Number of HSP's gapped (non-prelim): 576
length of query: 525
length of database: 191,569,459
effective HSP length: 122
effective length of query: 403
effective length of database: 125,736,307
effective search space: 50671731721
effective search space used: 50671731721
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 64 (29.3 bits)