Your job contains 1 sequence.
>009791
MLSTENIPSASTLFATYASMTASLMLFRSMANDFLPEPVRNYACFAFRYFFKPRSKELTL
VIEDSNGIARNQIFEAAEAYLSAKIGPSIERLKICKTPNEKVITIRLEKNEQIIDSFRGV
QLRWRFALVEAADGKGNSHSMRPEKRLFELTFHQTHKDMVLNSYLPHVIELAKDMKDKTR
VLKMYTLHRVPDYDAIRWDSVKLEHPATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVG
RAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLGNVTRDSDLRTLLLSTGNRSILV
IEDIDCSVDLPDRRNGNENNADAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGL
WSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYCGPYGFRLLAANYLGITDCEHK
LVAEIETLLKTINITPAQVAEQFMKSEDADVALAALIKLLKEKERNGSGDVDGDEDEINL
DEVAILESKKLKTQDQIQDKGKETAAGPIRRRRKRSSGRVRKSKN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 009791
(525 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:1005716649 - symbol:AT2G18193 species:3702 "Ar... 852 4.0e-123 2
TAIR|locus:2175986 - symbol:AT5G17760 species:3702 "Arabi... 824 4.0e-123 2
TAIR|locus:2053109 - symbol:AT2G18190 species:3702 "Arabi... 816 9.5e-120 2
TAIR|locus:2078007 - symbol:AT3G50940 species:3702 "Arabi... 778 2.0e-115 2
TAIR|locus:2175946 - symbol:AT5G17730 species:3702 "Arabi... 742 6.2e-112 2
TAIR|locus:2175956 - symbol:AT5G17740 species:3702 "Arabi... 1099 2.6e-111 1
TAIR|locus:2077997 - symbol:BCS1 "cytochrome BC1 synthesi... 1046 1.1e-105 1
TAIR|locus:2175976 - symbol:AT5G17750 species:3702 "Arabi... 664 1.0e-103 3
TAIR|locus:2037186 - symbol:AT1G43910 species:3702 "Arabi... 929 2.7e-93 1
TAIR|locus:2174502 - symbol:AT5G57480 species:3702 "Arabi... 879 5.6e-90 2
TAIR|locus:2098648 - symbol:AT3G28540 species:3702 "Arabi... 866 1.3e-86 1
TAIR|locus:505006520 - symbol:AT4G25835 species:3702 "Ara... 859 6.9e-86 1
TAIR|locus:2098658 - symbol:AT3G28510 species:3702 "Arabi... 845 2.1e-84 1
TAIR|locus:2128916 - symbol:AT4G30250 species:3702 "Arabi... 811 8.5e-81 1
TAIR|locus:2178067 - symbol:AATP1 "AAA-ATPase 1" species:... 809 1.4e-80 1
TAIR|locus:2095512 - symbol:AT3G28580 species:3702 "Arabi... 806 2.9e-80 1
TAIR|locus:2095537 - symbol:AT3G28610 species:3702 "Arabi... 790 1.4e-78 1
TAIR|locus:2095502 - symbol:AT3G28570 species:3702 "Arabi... 481 3.6e-78 2
TAIR|locus:2178057 - symbol:AT5G40000 species:3702 "Arabi... 785 4.8e-78 1
TAIR|locus:2098638 - symbol:AT3G28520 species:3702 "Arabi... 783 7.9e-78 1
TAIR|locus:2095532 - symbol:AT3G28600 species:3702 "Arabi... 764 8.1e-76 1
TAIR|locus:2039981 - symbol:AT2G46620 species:3702 "Arabi... 423 2.0e-63 2
TAIR|locus:2115954 - symbol:AT4G05380 species:3702 "Arabi... 640 1.1e-62 1
TAIR|locus:2086591 - symbol:AT3G29800 species:3702 "Arabi... 405 1.1e-58 2
DICTYBASE|DDB_G0291910 - symbol:bcs1lB "mitochondrial cha... 350 6.0e-32 1
DICTYBASE|DDB_G0286765 - symbol:DDB_G0286765 "BCS1-like p... 214 6.3e-29 3
ASPGD|ASPL0000063397 - symbol:AN7549 species:162425 "Emer... 327 5.4e-27 1
UNIPROTKB|G4MXF6 - symbol:MGG_15496 "Uncharacterized prot... 307 1.3e-24 1
SGD|S000002783 - symbol:BCS1 "Protein translocase and cha... 178 2.2e-24 2
GENEDB_PFALCIPARUM|PFF0155w - symbol:PFF0155w "bcs1-like ... 288 5.7e-23 1
UNIPROTKB|C6KSN2 - symbol:PFF0155w "Bcs1 protein, putativ... 288 5.7e-23 1
ASPGD|ASPL0000041452 - symbol:AN3131 species:162425 "Emer... 185 7.8e-23 2
POMBASE|SPAC644.07 - symbol:SPAC644.07 "mitochondrial Rie... 174 1.1e-22 2
RGD|1359658 - symbol:Bcs1l "BC1 (ubiquinol-cytochrome c r... 173 1.4e-22 3
ASPGD|ASPL0000007908 - symbol:AN6397 species:162425 "Emer... 286 1.5e-22 1
UNIPROTKB|Q9Y276 - symbol:BCS1L "Mitochondrial chaperone ... 173 2.4e-22 3
UNIPROTKB|I3LFK0 - symbol:BCS1L "Uncharacterized protein"... 168 5.8e-22 3
MGI|MGI:1914071 - symbol:Bcs1l "BCS1-like (yeast)" specie... 167 8.0e-22 2
UNIPROTKB|Q5E9H5 - symbol:BCS1L "Mitochondrial chaperone ... 169 1.1e-21 3
UNIPROTKB|E2RE50 - symbol:BCS1L "Uncharacterized protein"... 172 1.6e-21 3
FB|FBgn0032195 - symbol:CG4908 species:7227 "Drosophila m... 167 3.9e-21 2
UNIPROTKB|G4MN83 - symbol:MGG_02058 "Mitochondrial chaper... 272 8.4e-21 1
UNIPROTKB|F1P1Q6 - symbol:BCS1L "Uncharacterized protein"... 168 1.8e-20 2
UNIPROTKB|G4MYI1 - symbol:MGG_10383 "Mitochondrial chaper... 173 2.5e-20 2
ZFIN|ZDB-GENE-040426-938 - symbol:bcs1l "BCS1-like (yeast... 163 3.3e-20 2
CGD|CAL0005742 - symbol:orf19.458 species:5476 "Candida a... 179 3.7e-20 2
WB|WBGene00010042 - symbol:bcs-1 species:6239 "Caenorhabd... 173 4.1e-20 2
UNIPROTKB|E1BWG5 - symbol:BCS1L "Uncharacterized protein"... 164 5.2e-20 2
TAIR|locus:2115914 - symbol:AT4G05340 species:3702 "Arabi... 238 2.3e-19 1
TAIR|locus:2095467 - symbol:AT3G28560 "AT3G28560" species... 219 2.7e-17 1
UNIPROTKB|G4NGV5 - symbol:MGG_04018 "Mitochondrial chaper... 150 3.0e-17 2
UNIPROTKB|H7C492 - symbol:BCS1L "Mitochondrial chaperone ... 173 5.6e-15 2
UNIPROTKB|H7BZF6 - symbol:BCS1L "Mitochondrial chaperone ... 131 7.0e-14 2
DICTYBASE|DDB_G0289135 - symbol:bcs1lA "mitochondrial cha... 198 8.0e-13 1
TAIR|locus:2115944 - symbol:AT4G05370 "AT4G05370" species... 154 3.1e-10 1
DICTYBASE|DDB_G0292382 - symbol:psmC5 "HIV TAT binding-pr... 123 3.8e-10 2
SGD|S000003016 - symbol:RPT6 "ATPase of the 19S regulator... 114 3.1e-09 2
TIGR_CMR|GSU_1180 - symbol:GSU_1180 "cell division protei... 117 3.7e-09 2
UNIPROTKB|B4DR63 - symbol:PSMC1 "cDNA FLJ58247, highly si... 112 4.7e-09 2
UNIPROTKB|F1NTZ4 - symbol:PSMC1 "26S protease regulatory ... 112 8.2e-09 2
FB|FBgn0015282 - symbol:Rpt2 "Regulatory particle triple-... 112 8.3e-09 2
UNIPROTKB|F1NSP7 - symbol:PSMC1 "26S protease regulatory ... 112 8.3e-09 2
UNIPROTKB|Q90732 - symbol:PSMC1 "26S protease regulatory ... 112 8.3e-09 2
UNIPROTKB|A4FUZ3 - symbol:PSMC1 "Proteasome (Prosome, mac... 112 8.3e-09 2
UNIPROTKB|F1PQ40 - symbol:PSMC1 "Uncharacterized protein"... 112 8.3e-09 2
UNIPROTKB|P62191 - symbol:PSMC1 "26S protease regulatory ... 112 8.3e-09 2
UNIPROTKB|F2Z5J1 - symbol:PSMC1 "Uncharacterized protein"... 112 8.3e-09 2
MGI|MGI:106054 - symbol:Psmc1 "protease (prosome, macropa... 112 8.3e-09 2
RGD|621097 - symbol:Psmc1 "proteasome (prosome, macropain... 112 8.3e-09 2
CGD|CAL0006022 - symbol:RPT6 species:5476 "Candida albica... 105 9.0e-09 2
GENEDB_PFALCIPARUM|PF10_0081 - symbol:PF10_0081 "26S prot... 111 1.4e-08 2
UNIPROTKB|Q8IJW0 - symbol:PF10_0081 "26S proteasome regul... 111 1.4e-08 2
UNIPROTKB|Q5LNU8 - symbol:ftsH "ATP-dependent zinc metall... 107 3.1e-08 2
TIGR_CMR|SPO_3105 - symbol:SPO_3105 "ATP-dependent metall... 107 3.1e-08 2
WB|WBGene00015688 - symbol:C10G11.8 species:6239 "Caenorh... 108 4.6e-08 2
TAIR|locus:2052806 - symbol:VAR2 "VARIEGATED 2" species:3... 104 5.1e-08 2
TAIR|locus:2119926 - symbol:RPT2a "regulatory particle AA... 115 5.4e-08 2
ZFIN|ZDB-GENE-030131-8730 - symbol:psmc1a "proteasome (pr... 112 5.5e-08 2
ZFIN|ZDB-GENE-040625-69 - symbol:psmc1b "proteasome (pros... 112 5.5e-08 2
ASPGD|ASPL0000064945 - symbol:AN6988 species:162425 "Emer... 104 5.6e-08 2
UNIPROTKB|G4MMM3 - symbol:MGG_16395 "ATP-dependent Zn pro... 125 5.7e-08 2
TIGR_CMR|NSE_0423 - symbol:NSE_0423 "ATP-dependent metall... 109 6.1e-08 2
GENEDB_PFALCIPARUM|PF13_0033 - symbol:PF13_0033 "26S prot... 100 6.2e-08 2
UNIPROTKB|Q8IEQ1 - symbol:PF13_0033 "26S proteasome regul... 100 6.2e-08 2
WB|WBGene00004504 - symbol:rpt-4 species:6239 "Caenorhabd... 104 6.4e-08 2
UNIPROTKB|O17071 - symbol:rpt-4 "Probable 26S protease re... 104 6.4e-08 2
POMBASE|SPBC23G7.12c - symbol:rpt6 "19S proteasome regula... 101 6.5e-08 2
TAIR|locus:2061639 - symbol:RPT2b "regulatory particle AA... 114 6.9e-08 2
UNIPROTKB|C9J1S9 - symbol:BCS1L "Mitochondrial chaperone ... 132 7.2e-08 1
WB|WBGene00021425 - symbol:ppgn-1 species:6239 "Caenorhab... 157 7.7e-08 1
POMBASE|SPBC543.09 - symbol:yta12 "mitochondrial m-AAA pr... 104 8.3e-08 2
TAIR|locus:2009235 - symbol:FTSH8 "FTSH protease 8" speci... 104 1.1e-07 3
ZFIN|ZDB-GENE-060929-204 - symbol:spata5l1 "spermatogenes... 155 1.3e-07 1
ASPGD|ASPL0000032311 - symbol:AN5747 species:162425 "Emer... 104 1.5e-07 2
TAIR|locus:2161258 - symbol:RPT3 "regulatory particle tri... 109 1.5e-07 2
CGD|CAL0004443 - symbol:orf19.2057 species:5476 "Candida ... 104 1.8e-07 3
DICTYBASE|DDB_G0293388 - symbol:DDB_G0293388 "ATP-depende... 104 2.1e-07 2
UNIPROTKB|Q9FXT8 - symbol:OsRPT4 "Os02g0199900 protein" s... 99 2.1e-07 2
SGD|S000005785 - symbol:RPT4 "ATPase of the 19S regulator... 100 2.2e-07 2
WB|WBGene00004502 - symbol:rpt-2 species:6239 "Caenorhabd... 110 2.4e-07 2
WARNING: Descriptions of 247 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:1005716649 [details] [associations]
symbol:AT2G18193 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005783
GO:GO:0005524 EMBL:CP002685 GO:GO:0017111 HSSP:Q9LCZ4
InterPro:IPR025753 Pfam:PF14363 EMBL:BT026385 EMBL:AK118992
EMBL:AK175187 EMBL:AK175325 EMBL:AK176580 IPI:IPI00520678
RefSeq:NP_849972.1 UniGene:At.40029 ProteinModelPortal:Q8GW96
SMR:Q8GW96 PRIDE:Q8GW96 EnsemblPlants:AT2G18193.1 GeneID:816333
KEGG:ath:AT2G18193 TAIR:At2g18193 InParanoid:Q8GW96 OMA:IRSMANE
PhylomeDB:Q8GW96 ProtClustDB:CLSN2690765 Genevestigator:Q8GW96
Uniprot:Q8GW96
Length = 495
Score = 852 (305.0 bits), Expect = 4.0e-123, Sum P(2) = 4.0e-123
Identities = 168/323 (52%), Positives = 236/323 (73%)
Query: 9 SASTLFATYASMTASLMLFRSMANDFLPEPVRNYACFAFRYFFKPRSKELTLVIEDSNGI 68
S S+LF+ YAS+T LMLFRSM +DF+PE +R+Y FF P+SK LT++I+++ G+
Sbjct: 10 SPSSLFSAYASLTGFLMLFRSMLHDFVPEKLRSYFSSLLDRFFTPKSKYLTVIIDENFGL 69
Query: 69 ARNQIFEAAEAYLSAKIGPSIERLKICKTPNEKVITIRLEKNEQIIDSFRGVQLRWRFAL 128
RNQ+F+AAE YL +KIGP ERL++ K P +K TI +E+ E+I+D+F +++W +
Sbjct: 70 NRNQVFDAAEMYLRSKIGPETERLRVGKIPKQKHFTISIERGEEILDTFEESEVKWSY-- 127
Query: 129 VEAADGKGNSHSMRPEKRLFELTFHQTHKDMVLNSYLPHVIELAKDMKDKTRVLKMYT-- 186
V++ + KG+ KR +ELTF + +D VLNSYL HV+ ++++K RV+K+Y+
Sbjct: 128 VQSENEKGDK-----VKRYYELTFEKKLRDKVLNSYLTHVVAESEEIKRNLRVVKLYSRD 182
Query: 187 LHRVPDYDAI---RWDSVKLEHPATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAW 243
++ D D + W + LEHP+TFDTLAM+P+ K I++DL+RF++RKEFYKRVG+AW
Sbjct: 183 VYASDDDDGMAGGNWGCINLEHPSTFDTLAMDPNAKKKIIDDLERFLKRKEFYKRVGKAW 242
Query: 244 KRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLGNVTRDSDLRTLLLSTGNRSILVIED 303
KRGYLLYGPPGTGKSSL+AAMANYLKFDVFDL+L ++ + +L+ +LLST NRSILVIED
Sbjct: 243 KRGYLLYGPPGTGKSSLIAAMANYLKFDVFDLELSSIYDNGELKRVLLSTTNRSILVIED 302
Query: 304 IDCSVDLPDRRNGNENNADAQSK 326
IDC+ ++ DR EN D Q K
Sbjct: 303 IDCNAEVRDREA--ENQEDEQIK 323
Score = 379 (138.5 bits), Expect = 4.0e-123, Sum P(2) = 4.0e-123
Identities = 72/109 (66%), Positives = 87/109 (79%)
Query: 343 KGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYCGPY 402
KG+ +TLSG+LNFIDGLWSS GDERIIVFTTNHKERLDPALLRPGRMD+HI+MSYC
Sbjct: 323 KGK--VTLSGILNFIDGLWSSFGDERIIVFTTNHKERLDPALLRPGRMDVHINMSYCTGL 380
Query: 403 GFRLLAANYLGITDCEHKLVAEIETLLKTINITPAQVAEQFMKSEDADV 451
GFR L +NYLG+ H L EIE L+ + +TPA++AE+ M+ +D DV
Sbjct: 381 GFRTLVSNYLGLDGLNHPLCEEIEALVDSTEVTPAELAEELMQDDDTDV 429
Score = 38 (18.4 bits), Expect = 3.9e-87, Sum P(2) = 3.9e-87
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 479 NLDEVAILESKKLKTQDQIQDKGKETAAG 507
++D A + ++ + Q+ Q KGK T +G
Sbjct: 302 DIDCNAEVRDREAENQEDEQIKGKVTLSG 330
>TAIR|locus:2175986 [details] [associations]
symbol:AT5G17760 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM;IDA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 EMBL:CP002688 HSSP:Q01853 GO:GO:0017111
EMBL:AB006706 InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
IPI:IPI00548078 RefSeq:NP_850841.1 UniGene:At.23914
ProteinModelPortal:Q9FN75 SMR:Q9FN75 PRIDE:Q9FN75
EnsemblPlants:AT5G17760.1 GeneID:831644 KEGG:ath:AT5G17760
TAIR:At5g17760 InParanoid:Q9FN75 OMA:KQHDVQL PhylomeDB:Q9FN75
ProtClustDB:CLSN2686349 Genevestigator:Q9FN75 Uniprot:Q9FN75
Length = 505
Score = 824 (295.1 bits), Expect = 4.0e-123, Sum P(2) = 4.0e-123
Identities = 167/329 (50%), Positives = 229/329 (69%)
Query: 1 MLSTENIPSASTLFATYASMTASLMLFRSMANDFLPEPVRNYACFAFR-YFFKPRSKELT 59
M ++++PS +++F YASM +M+ RSMA++ +P P++++ R FF+ S LT
Sbjct: 1 MFFSKDLPSPTSVFTAYASMAGYMMMIRSMAHELIPAPLQDFIYRTLRSLFFRSSSSTLT 60
Query: 60 LVIEDSNGIARNQIFEAAEAYLSAKIGPSIERLKICKTPNEKVITIRLEKNEQIIDSFRG 119
L I+D N N+I+ AA+ YLS KI P RL+I K +K + + L E + D +
Sbjct: 61 LTIDDDNMGMNNEIYRAAQTYLSTKISPDAVRLRISKGHKDKHVNLYLSDGEIVNDVYED 120
Query: 120 VQLRWRFALVEAAD---------GKGNSHSMRP------EKRLFELTFHQTHKDMVLNSY 164
VQL WRF + + D G+G R + FEL+F + HKD++LNSY
Sbjct: 121 VQLVWRF-VTDGGDKKGGGGGVGGRGGGGGRRGGMDDDGKSEYFELSFDKKHKDLILNSY 179
Query: 165 LPHVIELAKDMKDKTRVLKMYTLHRVPDYDAIRWDSVKLEHPATFDTLAMEPDLKATIME 224
+P++ AK+++D+ R+L +++L+ ++RW+SV LEHP+TF+T+AME DLK ++E
Sbjct: 180 VPYIESKAKEIRDERRILMLHSLN------SLRWESVILEHPSTFETMAMEDDLKRDVIE 233
Query: 225 DLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLGNVTRDS 284
DLDRF+RRKEFYKRVG+AWKRGYLLYGPPGTGKSSLVAAMANYLKFDV+DLQL +V RDS
Sbjct: 234 DLDRFIRRKEFYKRVGKAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVYDLQLASVMRDS 293
Query: 285 DLRTLLLSTGNRSILVIEDIDCSVDLPDR 313
DLR LLL+T NRSILVIEDIDC+VDLP+R
Sbjct: 294 DLRRLLLATRNRSILVIEDIDCAVDLPNR 322
Score = 407 (148.3 bits), Expect = 4.0e-123, Sum P(2) = 4.0e-123
Identities = 79/112 (70%), Positives = 92/112 (82%)
Query: 342 GKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYCGP 401
G+ Q LTLSGLLNFIDGLWSSCGDERII+FTTNHK+RLDPALLRPGRMDMHI+M +C
Sbjct: 333 GESQGPLTLSGLLNFIDGLWSSCGDERIIIFTTNHKDRLDPALLRPGRMDMHIYMGHCSF 392
Query: 402 YGFRLLAANYLGITDCE--HKLVAEIETLLKTINITPAQVAEQFMKSEDADV 451
GF+ LA+NYLG++D H+L EIE L+ +TPAQVAE+ MKSEDADV
Sbjct: 393 QGFKTLASNYLGLSDAAMPHRLFPEIERLIDGEVMTPAQVAEELMKSEDADV 444
>TAIR|locus:2053109 [details] [associations]
symbol:AT2G18190 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002685 GO:GO:0017111 InterPro:IPR025753
Pfam:PF14363 IPI:IPI01020552 RefSeq:NP_179411.2 UniGene:At.66217
ProteinModelPortal:F4IQG2 SMR:F4IQG2 EnsemblPlants:AT2G18190.1
GeneID:816332 KEGG:ath:AT2G18190 OMA:TRINTDM ArrayExpress:F4IQG2
Uniprot:F4IQG2
Length = 494
Score = 816 (292.3 bits), Expect = 9.5e-120, Sum P(2) = 9.5e-120
Identities = 166/318 (52%), Positives = 225/318 (70%)
Query: 3 STENIP-SASTLFATYASMTASLMLFRSMANDFLPEPVRNYACFAFRYFFKPRSKELTLV 61
S NI S S+LF YAS+T LMLFRS+ ND +PE +R+Y FF P+SK LT+V
Sbjct: 4 SISNISLSPSSLFTAYASLTGFLMLFRSLFNDEVPERLRSYITDLLNRFFTPKSKNLTMV 63
Query: 62 IEDSNGIARNQIFEAAEAYLSAKIGPSIERLKICKTPNEKVITIRLEKNEQIIDSFRGVQ 121
I++ G RNQ+F+AAE YL KIGP RL++ K P +K TI +EK E+I+D+F +
Sbjct: 64 IDEIIGFKRNQVFDAAEVYLRNKIGPETARLRVGKLPKQKHFTIYIEKGEEILDTFENSE 123
Query: 122 LRWRFALVEAADGKGNSHSMRPEKRLFELTFHQTHKDMVLNSYLPHVIELAKDMKDKTRV 181
LRW + VE+ N S + EKR +ELTF + +D V+NSYL HV+ +++ K R
Sbjct: 124 LRWTY--VESE----NEASQK-EKRYYELTFEKKLRDKVMNSYLSHVVAESEETKRDLRA 176
Query: 182 LKMYT--LHRVPDYDAIR---WDSVKLEHPATFDTLAMEPDLKATIMEDLDRFVRRKEFY 236
+K+Y+ + D D + W + LEHP+TF+TLAM+P K I++D++RF++R+EFY
Sbjct: 177 VKLYSRDVRASKDDDGMAGAGWGCINLEHPSTFETLAMDPGAKKKIIDDMERFLKRREFY 236
Query: 237 KRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLGNVTRDSDLRTLLLSTGNR 296
KRVG+AWKRGYLLYGPPGTGKSSL+AAMANYLKFDVFDL+L ++ ++ L+++LLST NR
Sbjct: 237 KRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVFDLELSSIYENAQLKSILLSTTNR 296
Query: 297 SILVIEDIDCS-VDLPDR 313
SILVIEDIDCS ++ DR
Sbjct: 297 SILVIEDIDCSSAEVVDR 314
Score = 383 (139.9 bits), Expect = 9.5e-120, Sum P(2) = 9.5e-120
Identities = 71/104 (68%), Positives = 84/104 (80%)
Query: 348 LTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYCGPYGFRLL 407
+TLSGLLNF+DGLWSS GDERIIVFTTNHKERLDPALLRPGRMDMHI+MSYC GFR L
Sbjct: 330 VTLSGLLNFVDGLWSSFGDERIIVFTTNHKERLDPALLRPGRMDMHINMSYCTGLGFRTL 389
Query: 408 AANYLGITDCEHKLVAEIETLLKTINITPAQVAEQFMKSEDADV 451
+NYLG+ H L EIE L+ + +TPA++AE+ M+ +D DV
Sbjct: 390 VSNYLGLGGLNHPLCEEIEALIDSTEVTPAELAEELMQEDDTDV 433
>TAIR|locus:2078007 [details] [associations]
symbol:AT3G50940 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG0465
GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363 EMBL:BT026134
IPI:IPI00532009 RefSeq:NP_190663.2 UniGene:At.35440
ProteinModelPortal:Q147F9 SMR:Q147F9 PaxDb:Q147F9 PRIDE:Q147F9
EnsemblPlants:AT3G50940.1 GeneID:824258 KEGG:ath:AT3G50940
TAIR:At3g50940 HOGENOM:HOG000237995 InParanoid:Q147F9 OMA:DCSIELK
PhylomeDB:Q147F9 ProtClustDB:CLSN2680378 Genevestigator:Q147F9
Uniprot:Q147F9
Length = 451
Score = 778 (278.9 bits), Expect = 2.0e-115, Sum P(2) = 2.0e-115
Identities = 155/324 (47%), Positives = 220/324 (67%)
Query: 3 STENIPSASTLFATYASMTASLMLFRSMANDFLPEPVRNYACFAFRYFFKPRSKELTLVI 62
S ++ +A T AS+ A+ +L RS+ D++P V Y FR FF S ++T VI
Sbjct: 5 SESHLATAKTALTAVASVAAAAILARSVVQDYMPNEVHEYISHGFRRFFSYFSYQMTAVI 64
Query: 63 EDSNGIARNQIFEAAEAYLSAKIGPSIERLKICKTPNEKVITIRLEKNEQIIDSFRGVQL 122
E+ G NQ+FEAAEAYLS KI S R+K+ K + ++ +E++E+++D F GV+L
Sbjct: 65 EEFGGFEHNQVFEAAEAYLSTKISNSTRRIKVNKLEKQSNYSVTVERDEEVVDIFDGVKL 124
Query: 123 RWRFAL--VEAADGKG----NSHSMRPEKRLFELTFHQTHKDMVLNSYLPHVIELAKDMK 176
W V+ D + NS +++ E R +EL+F + K+MVL SYLP V+E A +K
Sbjct: 125 SWILVCRHVDKKDFRNPRDLNS-TLKSEVRSYELSFRKKFKNMVLESYLPFVVEQAASIK 183
Query: 177 DKTRVLKMYTLHRVPDYDAIRWDSVKLEHPATFDTLAMEPDLKATIMEDLDRFVRRKEFY 236
K + LK++T V Y ++ W SV L+HP+TF TLA++P++K ++EDLDRFV+RK FY
Sbjct: 184 QKFKTLKIFT---VDSY-SVEWTSVTLDHPSTFRTLALDPEVKKNLVEDLDRFVQRKGFY 239
Query: 237 KRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLGNVTRDSDLRTLLLSTGNR 296
RVG+AWKRGYLLYGPPGTGKSSL+AA+AN+L FD++DL L ++ +++LR LL+ST NR
Sbjct: 240 GRVGKAWKRGYLLYGPPGTGKSSLIAAIANHLNFDIYDLDLTSLNNNAELRRLLMSTANR 299
Query: 297 SILVIEDIDCSVDLPDRRNGNENN 320
SILV+EDIDCS++L DR ENN
Sbjct: 300 SILVVEDIDCSIELKDRSTDQENN 323
Score = 380 (138.8 bits), Expect = 2.0e-115, Sum P(2) = 2.0e-115
Identities = 73/120 (60%), Positives = 91/120 (75%)
Query: 332 VRKNKTDFAGGKGQHM-LTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRM 390
++ TD H +TLSGLLNF+DGLWSSCG+ERIIVFTTN++E+LDPALLRPGRM
Sbjct: 313 LKDRSTDQENNDPLHKTVTLSGLLNFVDGLWSSCGNERIIVFTTNYREKLDPALLRPGRM 372
Query: 391 DMHIHMSYCGPYGFRLLAANYLGITDCEHKLVAEIETLLKTINITPAQVAEQFMKSEDAD 450
DMHIHMSYC P F++LA+NYL I D H L +IE ++ I +TPA+VAEQ M+S+ D
Sbjct: 373 DMHIHMSYCTPAAFKVLASNYLEIQD--HILFEQIEEFIREIEVTPAEVAEQLMRSDSVD 430
>TAIR|locus:2175946 [details] [associations]
symbol:AT5G17730 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
eggNOG:COG0465 GO:GO:0017111 EMBL:AB006706 HSSP:Q9LCZ4
InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
ProtClustDB:CLSN2686349 IPI:IPI00546054 RefSeq:NP_197275.1
UniGene:At.54888 ProteinModelPortal:Q9FN78 SMR:Q9FN78 PRIDE:Q9FN78
EnsemblPlants:AT5G17730.1 GeneID:831641 KEGG:ath:AT5G17730
TAIR:At5g17730 InParanoid:Q9FN78 OMA:DINCTIE PhylomeDB:Q9FN78
Genevestigator:Q9FN78 Uniprot:Q9FN78
Length = 470
Score = 742 (266.3 bits), Expect = 6.2e-112, Sum P(2) = 6.2e-112
Identities = 144/319 (45%), Positives = 211/319 (66%)
Query: 1 MLSTENIPSASTLFATYASMTASLMLFRSMANDFLPEPVRNYACFAFRYFFKPRSKELTL 60
M S N+PS + + YAS+T +M+ + +P P++NY F LTL
Sbjct: 1 MFSLRNLPSLAPFVSAYASLTGYVMMIKPFLEMTIPPPLQNYMISYLNSFLHSTPSTLTL 60
Query: 61 VIED--SNGIARNQIFEAAEAYLSAKIGPSIERLKICKTPNEKVITIRLEKNEQIIDSFR 118
+I+D NG+ N+++ AA+ Y+S K+ + ERL+I + +EK + I E + D ++
Sbjct: 61 IIDDHIKNGMY-NELYGAAQVYISTKVNHNAERLRISRDRSEKNVNIHFSVGEVVSDIYQ 119
Query: 119 GVQLRWRFALVEAADGK----GNSHSMRPEKRLFELTFHQTHKDMVLNSYLPHVIELAKD 174
G++++WRF + G + P++ EL+F + H ++VLNSY+P+V AK
Sbjct: 120 GIEVKWRFCVDSNKSNMVHYFGEHFKLNPDRECVELSFEKKHTELVLNSYIPYVESKAKV 179
Query: 175 MKDKTRVLKMYTLHRVPDYDAIRWDSVKLEHPATFDTLAMEPDLKATIMEDLDRFVRRKE 234
+ ++ ++LKMY+ + Y ++W SV LEHP+TFDT+AM +LK ++M DLDRF+RRK+
Sbjct: 180 INNERKILKMYSYCCM--Y--LKWQSVNLEHPSTFDTMAMNEELKRSVMGDLDRFIRRKD 235
Query: 235 FYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLGNVTRDSDLRTLLLSTG 294
FYKRVG+ WKRGYLLYGPPGTGK+SLVAA+ANYLKFD++DLQL +V D+DLR LLL T
Sbjct: 236 FYKRVGKPWKRGYLLYGPPGTGKTSLVAAIANYLKFDIYDLQLASVREDADLRRLLLGTT 295
Query: 295 NRSILVIEDIDCSVDLPDR 313
N SIL++EDIDC+VDL R
Sbjct: 296 NSSILLVEDIDCAVDLHTR 314
Score = 383 (139.9 bits), Expect = 6.2e-112, Sum P(2) = 6.2e-112
Identities = 76/110 (69%), Positives = 87/110 (79%)
Query: 343 KGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYCGPY 402
KG MLTLSGLL IDGLWSSCGDERI++FTT HKERLDPALLRPGRMDMHIHM +C
Sbjct: 324 KGSSMLTLSGLLTCIDGLWSSCGDERIVIFTTTHKERLDPALLRPGRMDMHIHMGHCCFD 383
Query: 403 GFRLLAANYLGIT-DCEHKLVAEIETLLKTINITPAQVAEQFMKSEDADV 451
F+ LA+NYLG++ D H L EIE L+K +TPAQVAE+ MK+ED DV
Sbjct: 384 VFKTLASNYLGLSHDDPHHLYPEIERLIKGEVLTPAQVAEELMKNEDPDV 433
>TAIR|locus:2175956 [details] [associations]
symbol:AT5G17740 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR HSSP:Q01853 eggNOG:COG0465
GO:GO:0017111 EMBL:AB006706 InterPro:IPR025753 Pfam:PF14363
HOGENOM:HOG000237995 ProtClustDB:CLSN2686349 IPI:IPI00523930
RefSeq:NP_197276.1 UniGene:At.65521 ProteinModelPortal:Q9FN77
SMR:Q9FN77 EnsemblPlants:AT5G17740.1 GeneID:831642
KEGG:ath:AT5G17740 TAIR:At5g17740 InParanoid:Q9FN77 OMA:MINTIIP
PhylomeDB:Q9FN77 Genevestigator:Q9FN77 Uniprot:Q9FN77
Length = 533
Score = 1099 (391.9 bits), Expect = 2.6e-111, P = 2.6e-111
Identities = 229/458 (50%), Positives = 311/458 (67%)
Query: 1 MLSTENIPSASTLFATYASMTASLMLFRSMANDFLPEPVRNYACFAFRYFFKPRSKELTL 60
M+ + +IPS +++F+TYASM +M+ + M N +P PV+N+ + F RS LTL
Sbjct: 1 MVFSRDIPSPASMFSTYASMMGYVMIIKPMINTIIPRPVQNFVFSYLKSFAGSRSSTLTL 60
Query: 61 VIEDSNGI-ARNQIFEAAEAYLSAKIGPSIERLKICKTPNEKVITIRLEKNEQIIDSFRG 119
I+ + + ++++ AA+AYLS KI P+ RL + + P EK + + L E + D + G
Sbjct: 61 TIDQMSSMYIPDELYAAAQAYLSTKISPNSVRLIMARDPAEKKVKLYLSDGEVVSDVYNG 120
Query: 120 VQLRWRFALVEA----ADGKGNSHSMRPEKRLFELTFHQTHKDMVLNSYLPHVIELAKDM 175
++L+WRF + G S+ ++ EL+F + H+D+V+NSY+P+V AK++
Sbjct: 121 IKLKWRFLARNKNNTMVEEYGQSYQGNIQRESLELSFDKKHRDLVVNSYIPYVESKAKEV 180
Query: 176 KDKTRVLKMYTLHRVPDYDAIRWDSVKLEHPATFDTLAMEPDLKATIMEDLDRFVRRKEF 235
+K R+LKM+ + A W SV +HP+TFDT+AM DLK +++EDLDRFV RK+F
Sbjct: 181 NNKRRILKMHCYSHM----AQTWQSVNFKHPSTFDTMAMNDDLKRSMIEDLDRFVGRKDF 236
Query: 236 YKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLGNVTRDSDLRTLLLSTGN 295
YKRVG+AWKRGYLLYGPPGTGKSSLVAAMANYLKFD++DLQL +V D+ LR+LLL+T N
Sbjct: 237 YKRVGKAWKRGYLLYGPPGTGKSSLVAAMANYLKFDIYDLQLASVQGDAHLRSLLLATNN 296
Query: 296 RSILVIEDIDCSVDLPDRRNGNENNADAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLN 355
SIL+IEDIDCSVDLP R S+ GA V+ +K LTLSGLLN
Sbjct: 297 SSILLIEDIDCSVDLPTRLQPPTET----SQPLGA-VQVSKP----------LTLSGLLN 341
Query: 356 FIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYCGPYGFRLLAANYLGIT 415
IDGLWSSCG+ERII+FTTN+KE+LDPALLRPGRMDMHI+M +C GF+ LA+NYLG++
Sbjct: 342 CIDGLWSSCGNERIIIFTTNNKEKLDPALLRPGRMDMHIYMGHCSFQGFKTLASNYLGLS 401
Query: 416 DCE---HKLVAEIETLLKTINITPAQVAEQFMKSEDAD 450
D H L +I+ L+ +TPAQVAE+ MK EDAD
Sbjct: 402 DENDDTHPLCPDIKHLIDGHVLTPAQVAEELMKDEDAD 439
>TAIR|locus:2077997 [details] [associations]
symbol:BCS1 "cytochrome BC1 synthesis" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0009611 "response to wounding" evidence=RCA] [GO:0009612
"response to mechanical stimulus" evidence=RCA] [GO:0009627
"systemic acquired resistance" evidence=RCA] [GO:0009697 "salicylic
acid biosynthetic process" evidence=RCA] [GO:0010200 "response to
chitin" evidence=RCA] [GO:0052542 "defense response by callose
deposition" evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 EMBL:CP002686 GO:GO:0017111
InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
ProtClustDB:CLSN2680378 EMBL:AY064981 EMBL:BT002611 IPI:IPI00548437
RefSeq:NP_190662.2 UniGene:At.23776 ProteinModelPortal:Q8VZG2
SMR:Q8VZG2 STRING:Q8VZG2 PRIDE:Q8VZG2 EnsemblPlants:AT3G50930.1
GeneID:824257 KEGG:ath:AT3G50930 TAIR:At3g50930 InParanoid:Q8VZG2
OMA:QLMRSDE PhylomeDB:Q8VZG2 Genevestigator:Q8VZG2 Uniprot:Q8VZG2
Length = 576
Score = 1046 (373.3 bits), Expect = 1.1e-105, P = 1.1e-105
Identities = 210/422 (49%), Positives = 293/422 (69%)
Query: 3 STEN-IPSASTLFATYASMTASLMLFRSMANDFLPEPVRNYACFAFRYFFKPRSKELTLV 61
S E+ + +A T+ T AS+ A+ ML RS+ D+LP+ V +Y + FR F S ++T++
Sbjct: 50 SAESRLATAKTVLTTAASVAATAMLARSLVQDYLPDEVHHYISYGFRSIFGYFSSQMTII 109
Query: 62 IEDSNGIARNQIFEAAEAYLSAKIGPSIERLKICKTPNEKVITIRLEKNEQIIDSFRGVQ 121
IE+ G A N++FEAAEAYL+ KI PS +R+K+ K E + +E++E+++D++ GV+
Sbjct: 110 IEEFEGFAHNEVFEAAEAYLATKISPSNKRIKVSKHEKENNYNVTVERDEEVVDTYNGVK 169
Query: 122 LRWRFAL--VEAA---DGKGNSHSMRPEKRLFELTFHQTHKDMVLNSYLPHVIELAKDMK 176
+W VE+ + + + ++R E R FEL FH+ KD+ L SYLP +++ A MK
Sbjct: 170 FQWILHCRHVESKHFHNPRDLNSTLRSEVRSFELNFHKKFKDVALESYLPFMVKRATLMK 229
Query: 177 DKTRVLKMYTLHRVPDYD--AIRWDSVKLEHPATFDTLAMEPDLKATIMEDLDRFVRRKE 234
+ + LK++TL Y + W SV L+HP+TF TLAM+ D+K ++MEDLD+FV+R++
Sbjct: 230 QEKKTLKIFTLSPENMYGNYSDAWTSVTLDHPSTFKTLAMDSDVKTSVMEDLDKFVKRRD 289
Query: 235 FYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLGNVTRDSDLRTLLLSTG 294
FYKRVG+AWKRGYLLYGPPGTGKSSL+AAMAN+L FD++DL+L V +S+LR LL++T
Sbjct: 290 FYKRVGKAWKRGYLLYGPPGTGKSSLIAAMANHLNFDIYDLELTAVNNNSELRRLLIATA 349
Query: 295 NRSILVIEDIDCSVDLPDRRNGNENNADAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLL 354
NRSIL++EDIDCS++L DR +D + ++D +TLSGLL
Sbjct: 350 NRSILIVEDIDCSLELKDR------TSDEPPR---------ESDDIEDPRYKKVTLSGLL 394
Query: 355 NFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYCGPYGFRLLAANYLGI 414
NFIDGLWSSCGDERII+FTTN+KE+LD ALLRPGRMDMHIHMSYC P F+ LA NYL I
Sbjct: 395 NFIDGLWSSCGDERIIIFTTNYKEKLDAALLRPGRMDMHIHMSYCTPSTFKALALNYLEI 454
Query: 415 TD 416
+
Sbjct: 455 KE 456
Score = 365 (133.5 bits), Expect = 7.5e-33, P = 7.5e-33
Identities = 69/103 (66%), Positives = 84/103 (81%)
Query: 348 LTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYCGPYGFRLL 407
+TLSGLLNFIDGLWSSCGDERII+FTTN+KE+LD ALLRPGRMDMHIHMSYC P F+ L
Sbjct: 388 VTLSGLLNFIDGLWSSCGDERIIIFTTNYKEKLDAALLRPGRMDMHIHMSYCTPSTFKAL 447
Query: 408 AANYLGITDCEHKLVAEIETLLKTINITPAQVAEQFMKSEDAD 450
A NYL I EH+L ++IE ++ +TPA+VAEQ M+++ D
Sbjct: 448 ALNYLEIK--EHRLFSKIEEGIEATEVTPAEVAEQLMRNDSVD 488
>TAIR|locus:2175976 [details] [associations]
symbol:AT5G17750 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002688 GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363
IPI:IPI00522104 RefSeq:NP_197277.1 UniGene:At.54890
ProteinModelPortal:F4KID5 SMR:F4KID5 EnsemblPlants:AT5G17750.1
GeneID:831643 KEGG:ath:AT5G17750 OMA:YIAYVER Uniprot:F4KID5
Length = 392
Score = 664 (238.8 bits), Expect = 1.0e-103, Sum P(3) = 1.0e-103
Identities = 126/241 (52%), Positives = 175/241 (72%)
Query: 78 EAYLSAKIGPSIERLKICKTPNEKVITIRLEKNEQIIDSFRGVQLRWRFALVEAADGKGN 137
+AYLS+KI P +L++ + PN K + + L + E + D ++G++L+WR+ +E + K
Sbjct: 55 QAYLSSKISPDASKLRMTRDPNNKNVNLHLSQGEVVSDVYKGIELKWRY--LEGRNKKTT 112
Query: 138 SHSMRPEKRL-----FELTFHQTHKDMVLNSYLPHVIELAKDMKDKTRVLKMYTLHRVPD 192
E+ + FEL+F + HKD+V+ SY+ +V AK +K++ R++KM H
Sbjct: 113 VVGEETEEAIVNWQCFELSFDKKHKDLVVKSYIAYVERKAKVIKEERRIIKM---HSYSS 169
Query: 193 YDAIRWDSVKLEHPATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGP 252
Y +RW SVK EHP+TF T+AM P LK+++MEDLDRF++RK++YKRVG+AWKR Y LYGP
Sbjct: 170 Y-TLRWQSVKFEHPSTFHTMAMTPKLKSSVMEDLDRFIKRKDYYKRVGKAWKRSYFLYGP 228
Query: 253 PGTGKSSLVAAMANYLKFDVFDLQLGNVTRDSDLRTLLLSTGNRSILVIEDIDCSVDLPD 312
PGTGKSSLVAAMANYLKFD++DLQL NV D+ LR+LLL+T N SIL++EDIDCSVDLP
Sbjct: 229 PGTGKSSLVAAMANYLKFDIYDLQLANVQGDAQLRSLLLATNNSSILLVEDIDCSVDLPT 288
Query: 313 R 313
R
Sbjct: 289 R 289
Score = 298 (110.0 bits), Expect = 1.0e-103, Sum P(3) = 1.0e-103
Identities = 58/96 (60%), Positives = 73/96 (76%)
Query: 337 TDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHM 396
T KG LTLSGLLN IDGLWSSCGDERI++FTTN+KE LDPALLRPG MDMHI++
Sbjct: 295 TTLGAPKGSTPLTLSGLLNCIDGLWSSCGDERIVIFTTNNKEVLDPALLRPGCMDMHIYL 354
Query: 397 SYCGPYGFRLLAANYLGI---TDCEHKLVAEIETLL 429
+C GF++LA+NYLG+ +D H+L +I+ L+
Sbjct: 355 GHCSFEGFKILASNYLGMPHDSDDPHRLYPDIKRLI 390
Score = 99 (39.9 bits), Expect = 1.0e-103, Sum P(3) = 1.0e-103
Identities = 17/49 (34%), Positives = 33/49 (67%)
Query: 1 MLSTENIPSASTLFATYASMTASLMLFRSMANDFLPEPVRNYACFAFRY 49
M+ ++++PS +T+F+TYAS+ +M+ + M + +P P++N F F Y
Sbjct: 1 MVFSKDLPSPATMFSTYASLAGYIMMIKPMIHTIIPRPIQN---FVFSY 46
>TAIR|locus:2037186 [details] [associations]
symbol:AT1G43910 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=IDA] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004
SMART:SM00382 GO:GO:0005783 EMBL:CP002684 GO:GO:0009506
GO:GO:0005524 GO:GO:0009737 GO:GO:0005794 HSSP:Q01853 GO:GO:0017111
EMBL:AC022314 UniGene:At.28764 UniGene:At.48277 InterPro:IPR025753
Pfam:PF14363 IPI:IPI00548009 PIR:C96503 RefSeq:NP_175058.1
ProteinModelPortal:Q9LP11 SMR:Q9LP11 STRING:Q9LP11 PRIDE:Q9LP11
EnsemblPlants:AT1G43910.1 GeneID:840990 KEGG:ath:AT1G43910
InParanoid:Q9LP11 OMA:MWESTVF ProtClustDB:CLSN2679597
Genevestigator:Q9LP11 Uniprot:Q9LP11
Length = 475
Score = 929 (332.1 bits), Expect = 2.7e-93, P = 2.7e-93
Identities = 202/451 (44%), Positives = 278/451 (61%)
Query: 7 IPSASTLFATYASMTASLMLFRSMANDFLPEPVRNY-ACFAFRYFFKPRSKELTLVIEDS 65
+PS S +F+ Y S +A MLFR++ N+ +P+ +R Y A A +F + T VIE
Sbjct: 8 VPSVSAVFSLYTSFSAITMLFRTILNEIVPKRIREYIAMKAVDFFSSYFQSDFTFVIEQR 67
Query: 66 NGIARNQIFEAAEAYLSAKI-GPSIERLKI----CKTPNEKVITIRLEKNEQIIDSFRGV 120
NQ F AAE YL + G S +L + K P + + + N +IID+F G+
Sbjct: 68 WEFVENQTFRAAEVYLPTCLAGLSTGKLLVGSSNLKNPAAEP-KLGIPVNTKIIDNFEGI 126
Query: 121 QLRWRFALVEAADGKGNSHSMRPEKRLFELTFHQTHKDMVLNSYLPHVIELAKDMKDKTR 180
L W VE + PEKR F LT + ++ ++ Y ++ + A+ +
Sbjct: 127 HLEWTLHSVE-------TKKYLPEKRYFHLTCKKEFREKIMTDYFTYLAKSAEKIMSHRE 179
Query: 181 VLKMYTLHRVPDYDAIRWDSVKLEHPATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVG 240
LK+YT ++ D +W+S EH TF+TLA+EPDLK T+++DLD F + K+F+K VG
Sbjct: 180 NLKIYTYNQ----DRSKWESAIFEHHTTFETLAVEPDLKKTLIDDLDAFSKGKDFFKSVG 235
Query: 241 RAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLGNVTRDSDLRTLLLSTGNRSILV 300
RAWKRGYLLYGPPGTGKSS+VAA+AN++K+ ++DLQ+ +V D +LR +L ST NRSIL+
Sbjct: 236 RAWKRGYLLYGPPGTGKSSMVAAIANHMKYHIYDLQIQSVRDDGELREILTSTKNRSILL 295
Query: 301 IEDIDCSVDLPDRRNGNENNADAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGL 360
IEDIDC D RR + D RK K F G ++LSGLLNF+DGL
Sbjct: 296 IEDIDCGADASRRRQSKKKEEDGGEDDGEPQKRKKK--FEVG-----ISLSGLLNFVDGL 348
Query: 361 WSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYCGPYGFRLLAANYLGITDCEHK 420
WSSCG+E+II+FTTNHKE+LDPALLRPGRMD+HI M C P+ F+ L A YL TD EH
Sbjct: 349 WSSCGEEKIIIFTTNHKEKLDPALLRPGRMDVHILMDNCTPFVFKKLVALYLK-TD-EHV 406
Query: 421 LVAEIETLLKTINITPAQVAEQFMKSEDADV 451
L IE L+ ++ TPA+V +Q M S++AD+
Sbjct: 407 LFDPIEKLILEVSSTPAEVTQQLMASKNADI 437
>TAIR|locus:2174502 [details] [associations]
symbol:AT5G57480 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0009407
"toxin catabolic process" evidence=RCA] [GO:0010583 "response to
cyclopentenone" evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG0465 GO:GO:0017111
EMBL:AB011482 InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
ProtClustDB:CLSN2687417 IPI:IPI00541799 RefSeq:NP_200556.1
UniGene:At.49428 ProteinModelPortal:Q9FKM3 SMR:Q9FKM3
EnsemblPlants:AT5G57480.1 GeneID:835852 KEGG:ath:AT5G57480
TAIR:At5g57480 InParanoid:Q9FKM3 OMA:HNNSELR PhylomeDB:Q9FKM3
Genevestigator:Q9FKM3 Uniprot:Q9FKM3
Length = 520
Score = 879 (314.5 bits), Expect = 5.6e-90, Sum P(2) = 5.6e-90
Identities = 192/503 (38%), Positives = 287/503 (57%)
Query: 14 FATYASMTASLMLFRSMANDFLPEPVRNYACFAFRYFFKPRSKELTLVIEDSNGIARNQI 73
+ + AS+ L +S+ P +R F F S I + +G+ N++
Sbjct: 5 WTSLASLLGVLAFCQSLMQSIFPPELRFAFLKFFNRIFHVFSSYCYFDITEIDGVNTNEL 64
Query: 74 FEAAEAYLSAKIGPSIERLKICKTPNEKVITIRLEKNEQIIDSFRGVQLRWRFALVEAAD 133
+ A + YLS+ + + RL + + N IT L N+ I+D+F GV + W + +
Sbjct: 65 YNAVQLYLSSSVSIAGNRLSLTRAVNSSSITFGLSNNDSIVDTFNGVTVLWEHVVTQRQT 124
Query: 134 GKGNSHSMRPEKRLFELTFHQTHKDMVLNSYLPHVIELAKDMKDKTRVLKMYTLHRVPDY 193
+ EKR F L + K ++LNSYL +++E A +++ K + +YT R
Sbjct: 125 QTFAWRPLPEEKRGFTLRIKKKDKTLILNSYLDYIMERANEIRRKNQDRLLYTNSRGGSL 184
Query: 194 DAIR--WDSVKLEHPATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYG 251
D+ W+SV +HP+TF+TLAM+P K IM+DL F + FY++ GRAWKRGYLLYG
Sbjct: 185 DSRGHPWESVPFKHPSTFETLAMDPRKKQQIMDDLKDFAEGQVFYQKTGRAWKRGYLLYG 244
Query: 252 PPGTGKSSLVAAMANYLKFDVFDLQLGNVTRDSDLRTLLLSTGNRSILVIEDIDCSVDLP 311
PPGTGKSS++AAMANYL +D++DL+L V +S+LR LL+ T ++SI+VIEDIDCS++L
Sbjct: 245 PPGTGKSSMIAAMANYLGYDIYDLELTEVHSNSELRKLLMKTSSKSIIVIEDIDCSINLT 304
Query: 312 DRRNGNENNADAQSKAAGAAVRKNKTDFAGGKGQ-----HMLTLSGLLNFIDGLWSSCGD 366
+R+ N +N +Q A R +GG G+ + +TLSGLLNF DGLWS CG
Sbjct: 305 NRKK-NSSNVSSQRSYYDAETRNGSGSGSGGSGEEGGNGNTITLSGLLNFTDGLWSCCGS 363
Query: 367 ERIIVFTTNHKERLDPALLRPGRMDMHIHMSYCGPYGFRLLAANYLG--ITDCEHKLVAE 424
ERI VFTTNH E+LDPALLR GRMDMHI+MS+C ++L NYLG + D ++ E
Sbjct: 364 ERIFVFTTNHIEKLDPALLRSGRMDMHIYMSFCNFPSLKILLKNYLGYGVEDINGDVLKE 423
Query: 425 IETLLKTINITPAQVAEQFMKSE-DAD-VXXXXXXXXXXXXXRN-GSGDVDGDEDEIN-L 480
+E +++ +TPA V+E +K+ D + RN G + G + L
Sbjct: 424 MEMVVEKAEMTPADVSEALIKNRRDKEKAIRELLEDLKSRGERNVKDGKLRGGSGNLTEL 483
Query: 481 DEVAILESKKLKTQDQIQDKGKE 503
+ V E + + +Q++ +D +E
Sbjct: 484 EVVEEQEKRAIDSQNEDEDHDEE 506
Score = 38 (18.4 bits), Expect = 5.6e-90, Sum P(2) = 5.6e-90
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 470 DVDGDEDEINLDE 482
D D DE+EI L++
Sbjct: 500 DEDHDEEEIELED 512
>TAIR|locus:2098648 [details] [associations]
symbol:AT3G28540 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0017111
EMBL:AP002059 InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
IPI:IPI00530975 RefSeq:NP_189495.1 UniGene:At.42777
ProteinModelPortal:Q9LH82 SMR:Q9LH82 PRIDE:Q9LH82
EnsemblPlants:AT3G28540.1 GeneID:822484 KEGG:ath:AT3G28540
TAIR:At3g28540 InParanoid:Q9LH82 OMA:IITEAYL PhylomeDB:Q9LH82
ProtClustDB:CLSN2685225 ArrayExpress:Q9LH82 Genevestigator:Q9LH82
Uniprot:Q9LH82
Length = 510
Score = 866 (309.9 bits), Expect = 1.3e-86, P = 1.3e-86
Identities = 186/450 (41%), Positives = 277/450 (61%)
Query: 10 ASTLFATYASMTASLMLFRSMANDFLPEPVRNYA--CFAFRYFFKPRSKEL--TLVIEDS 65
A LF + ASLM F S+ F+P +R+Y CF + S + T ED
Sbjct: 4 AGGLFGFTGTTMASLMFFWSVYRQFVPYQIRDYLEKCFYKMFGLVSNSVHIKFTEYTEDK 63
Query: 66 NGIARNQIFEAAEAYLSAKIGPSIERLKICKTPNEKVITIRLEKNEQIIDSFRGVQLRWR 125
G+ ++Q ++ YLS+K +RLK ++ N K + + L+ +E + D F+GV++ W
Sbjct: 64 -GLKKSQAYDLIRNYLSSKSTARAQRLKANESKNSKSLVLSLDNHEAVEDVFQGVKVVWS 122
Query: 126 FALVEAADGKGNSHSMRPEKRLFELTFHQTHKDMVLNSYLPHVIELAKDMKDKTRVLKMY 185
++ K N + EKR L+FH +++M+ +YL HV+ K++ K R K+Y
Sbjct: 123 LSV-----WKSNDQADSSEKRYLTLSFHNRYREMITTTYLDHVLREGKEIGLKNRERKLY 177
Query: 186 TLHRVPDYDAIR---WDSVKLEHPATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRA 242
T + DY A R W +V +HPATF+TLAM+ + K + +DL +F + K++Y++VG+
Sbjct: 178 TNNSSQDYSAWREGRWSNVPFDHPATFETLAMDLEKKEGMKKDLIKFTKGKDYYRKVGKP 237
Query: 243 WKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLGNVTRDSDLRTLLLSTGNRSILVIE 302
WKRGYLL+GPPGTGKS++++AMAN+L++DV+DL+L V +S+L+ L+L T +SI+VIE
Sbjct: 238 WKRGYLLFGPPGTGKSTMISAMANFLEYDVYDLELTTVKDNSELKKLMLDTKGKSIVVIE 297
Query: 303 DIDCSVDLP-DRRNGNENNADAQSKAAGAAVRKN-KTDFAGGKGQHMLTLSGLLNFIDGL 360
DIDCS+DL R+ E + D + + K K + G+ + +TLSGLLN IDGL
Sbjct: 298 DIDCSLDLTGQRKKKKEEDEDEEEEEKKKEAEKLLKRE--RGERESKVTLSGLLNAIDGL 355
Query: 361 WSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYCGPYGFRLLAANYLGITDCEHK 420
WS+C E+IIVFTTN+ ++LDPAL+R GRMD HI MSYC F++LA NYL I H
Sbjct: 356 WSACSGEKIIVFTTNYLDKLDPALIRRGRMDNHIEMSYCRFEAFKVLAKNYLEIES--HD 413
Query: 421 LVAEIETLLKTINITPAQVAEQFMKSEDAD 450
L EI+ L++ +++PA VAE M D D
Sbjct: 414 LFGEIKRLVEETDMSPADVAENLMPKSDED 443
>TAIR|locus:505006520 [details] [associations]
symbol:AT4G25835 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002687 GO:GO:0017111 InterPro:IPR025753
Pfam:PF14363 HOGENOM:HOG000237995 EMBL:AY075607 IPI:IPI00532146
RefSeq:NP_567730.1 UniGene:At.32228 ProteinModelPortal:Q8RY66
SMR:Q8RY66 PRIDE:Q8RY66 EnsemblPlants:AT4G25835.1 GeneID:828689
KEGG:ath:AT4G25835 TAIR:At4g25835 InParanoid:Q8RY66 OMA:IMEKANE
PhylomeDB:Q8RY66 ProtClustDB:CLSN2687417 Genevestigator:Q8RY66
Uniprot:Q8RY66
Length = 506
Score = 859 (307.4 bits), Expect = 6.9e-86, P = 6.9e-86
Identities = 181/438 (41%), Positives = 260/438 (59%)
Query: 14 FATYASMTASLMLFRSMANDFLPEPVRNYACFAFRYFFKPRSKELTLVIEDSNGIARNQI 73
+ + AS+ L +S+ N P +R F FFK S I + +G+ N++
Sbjct: 5 WTSLASLLGVLAFCQSLMNSVFPPELRFAISKLFNKFFKLFSTFCYFDITEIDGVNTNEL 64
Query: 74 FEAAEAYLSAKIGPSIERLKICKTPNEKVITIRLEKNEQIIDSFRGVQLRWRFALVEAAD 133
+ A + YLS+ + + RL + + N +T L N+ I+D+F V + W + +
Sbjct: 65 YNAVQLYLSSSVSIAGNRLSLTRAVNSSSVTFGLSNNDSIVDTFNSVTVVWEHIVTQRQT 124
Query: 134 GKGNSHSMRPEKRLFELTFHQTHKDMVLNSYLPHVIELAKDMKDKTRVLKMYTLHRVPDY 193
M EKR F L + K+++L+SYL +++E A +++ + +YT R
Sbjct: 125 QTFAWRPMPEEKRGFTLRIKKKDKNLILDSYLDYIMEKANEIRRLNQDRLLYTNSRGGSL 184
Query: 194 DA--IRWDSVKLEHPATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYG 251
D+ + W+SV +HP+TFDTLAM+P K IMEDL F + FY+R GRAWKRGYLLYG
Sbjct: 185 DSRGLPWESVPFKHPSTFDTLAMDPVKKQQIMEDLKDFAECQSFYERTGRAWKRGYLLYG 244
Query: 252 PPGTGKSSLVAAMANYLKFDVFDLQLGNVTRDSDLRTLLLSTGNRSILVIEDIDCSVDLP 311
PPGTGKSS++AAMANYL++D++DL+L V +S+LR LL+ T ++SI+VIEDIDCS++L
Sbjct: 245 PPGTGKSSMIAAMANYLRYDIYDLELTEVKSNSELRKLLMKTSSKSIIVIEDIDCSINLT 304
Query: 312 DRRNGNENNA-DAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERII 370
+R + + G+ + D G + +TLSGLLNF DGLWS CG ERI
Sbjct: 305 NRNKKQSTGSYNEPEMLTGSGLGD---DLGDG---NTITLSGLLNFTDGLWSCCGSERIF 358
Query: 371 VFTTNHKERLDPALLRPGRMDMHIHMSYCGPYGFRLLAANYLGIT--DCEHKLVAEIETL 428
VFTTNH E+LDPALLR GRMDMHIHMSYC ++L NYLG D ++ E+ +
Sbjct: 359 VFTTNHIEKLDPALLRSGRMDMHIHMSYCTFSSVKILLRNYLGFEEGDLNDVVLKELAEV 418
Query: 429 LKTINITPAQVAEQFMKS 446
+ ITPA V+E +K+
Sbjct: 419 VDRAEITPADVSEALIKN 436
>TAIR|locus:2098658 [details] [associations]
symbol:AT3G28510 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0001666
"response to hypoxia" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 GO:GO:0005783 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG0465
GO:GO:0017111 EMBL:AP002059 InterPro:IPR025753 Pfam:PF14363
HOGENOM:HOG000237995 ProtClustDB:CLSN2685225 EMBL:AY099692
IPI:IPI00532130 RefSeq:NP_189492.1 UniGene:At.42784
ProteinModelPortal:Q9LH84 SMR:Q9LH84 PaxDb:Q9LH84
EnsemblPlants:AT3G28510.1 GeneID:822481 KEGG:ath:AT3G28510
TAIR:At3g28510 InParanoid:Q9LH84 OMA:YLEIETH PhylomeDB:Q9LH84
ArrayExpress:Q9LH84 Genevestigator:Q9LH84 Uniprot:Q9LH84
Length = 530
Score = 845 (302.5 bits), Expect = 2.1e-84, P = 2.1e-84
Identities = 194/495 (39%), Positives = 289/495 (58%)
Query: 23 SLMLFRSMANDFLPEPVRNYACFAFRYFFKPRS-----KELTLVIEDSNGIARNQIFEAA 77
S M F ++ ++P R Y RYF K ++ G+ R+Q +++
Sbjct: 17 SFMFFWAIYKQYVPAHFRAYV---ERYFHKMIGWISYYVDIKFTEYTDEGLKRSQAYDSI 73
Query: 78 EAYLSAKIGPSIERLKICKTPNEKVITIRLEKNEQIIDSFRGVQLRWRFALVEAADGKGN 137
YL++K +RLK +T N K + ++ +E+I D F GV+++W ++ V+ + N
Sbjct: 74 RNYLASKSTALAKRLKANETKNSKSLVFSMDDHEEIEDEFEGVKVKW-YSNVKVIQPQSN 132
Query: 138 -SHSMRPEKRLFELTFHQTHKDMVLNSYLPHVIELAKDMKDKTRVLKMYTLHRVPDYDAI 196
E+R F L+FH+ H+ M++ +YL HV+ K + R K+YT + ++
Sbjct: 133 YGQRSSEERRHFTLSFHRRHRGMIIETYLDHVLREGKAIGLMNRERKLYTNNSSQEWYPW 192
Query: 197 R---WDSVKLEHPATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPP 253
R W +V HPATF+TLAM+P+ K I +DL +F + K++YK+VG+ WKRGYLL+GPP
Sbjct: 193 RSGKWSNVPFHHPATFETLAMDPEKKEGIKKDLIKFSKGKDYYKKVGKPWKRGYLLFGPP 252
Query: 254 GTGKSSLVAAMANYLKFDVFDLQLGNVTRDSDLRTLLLSTGNRSILVIEDIDCSVDLPDR 313
GTGKS+++AA+AN+L +DV+DL+L V +S+L+ LLL T ++SI+VIEDIDCS+DL +
Sbjct: 253 GTGKSTMIAAIANFLDYDVYDLELTTVKDNSELKKLLLDTTSKSIIVIEDIDCSLDLTGQ 312
Query: 314 RNGN---ENNADAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERII 370
R + D + K G +K K D K Q +TLSGLLN IDGLWS+C E+II
Sbjct: 313 RKKKKEEDEEEDGEEKKEGE--KKPKVD---DK-QSKVTLSGLLNSIDGLWSACSGEKII 366
Query: 371 VFTTNHKERLDPALLRPGRMDMHIHMSYCGPYGFRLLAANYLGITDCEHKLVAEIETLLK 430
VFTTN ++LDPAL+R GRMD HI MSYC F++LA NYL I H L EIE L+
Sbjct: 367 VFTTNFVDKLDPALIRRGRMDNHIEMSYCKFEAFKVLAKNYLEIET--HDLYGEIERKLE 424
Query: 431 TINITPAQVAEQFM-KSEDADVXXXXXXXXXXXXXRNGSGDVDGDEDEINLDEVAILESK 489
+++PA VAE M KS++ D +E+E + A E+K
Sbjct: 425 ETDMSPADVAETLMPKSDEEDADICIKRLVKTLEEEKEKARKLAEEEE---KKKAEKEAK 481
Query: 490 KLKTQDQIQDKGKET 504
K+K ++ ++K K+T
Sbjct: 482 KMKKAEEAEEKKKKT 496
>TAIR|locus:2128916 [details] [associations]
symbol:AT4G30250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002687 GO:GO:0017111 InterPro:IPR025753
Pfam:PF14363 IPI:IPI00517260 RefSeq:NP_194754.2 UniGene:At.65015
ProteinModelPortal:F4JPK8 SMR:F4JPK8 EnsemblPlants:AT4G30250.1
GeneID:829148 KEGG:ath:AT4G30250 Uniprot:F4JPK8
Length = 519
Score = 811 (290.5 bits), Expect = 8.5e-81, P = 8.5e-81
Identities = 179/457 (39%), Positives = 266/457 (58%)
Query: 11 STLFATYASMTASLMLFRSMANDFLPEPVRNYACFAFRYFF-KPR---SKELTLVIEDSN 66
S + T AS+ L +++ P +R AF +F + R S + I + +
Sbjct: 2 SDYWTTMASLLGMLAFCQTIVQLVFPPELR----LAFLHFLTRIRHVFSSHIYFDITEID 57
Query: 67 GIARNQIFEAAEAYLSAKI--GPSIE------RLKICKTPNEKVITIRLEKNEQIIDSFR 118
G+ N+++ A + YLS+ + ++ RL + + PN +T L N++I D F
Sbjct: 58 GVNTNELYNAVQLYLSSSVTVNDAVSSSNNNTRLSLTRVPNSSSVTFGLSNNDRITDVFN 117
Query: 119 GVQLRWRFALVEAADGKGNSHSMRPEKRLFELTFHQTHKDMVLNSYLPHVIELAKDMKDK 178
GV + W +V+ + M EKR F L ++ K +VL+SYL +++ +++++ +
Sbjct: 118 GVTILWEHVVVQRQVQSFSWRPMPEEKRGFTLQINKRDKALVLDSYLDYIVGKSEEIRRR 177
Query: 179 TRVLKMYTLHRVPDYDAIR--WDSVKLEHPATFDTLAMEPDLKATIMEDLDRFVRRKEFY 236
+YT R DA WDSV+ +HP+TFDTLAM+P+ K IMEDL F + FY
Sbjct: 178 NEERLLYTNSRGVSLDARSHPWDSVRFKHPSTFDTLAMDPEKKKRIMEDLREFANGQGFY 237
Query: 237 KRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLGNVTRDSDLRTLLLSTGNR 296
++ GRAWKRGYLLYGPPGTGKSSL+AAMANYL +D++DL+L V +S+LR LL+ T ++
Sbjct: 238 QKTGRAWKRGYLLYGPPGTGKSSLIAAMANYLGYDIYDLELTEVQNNSELRKLLMKTSSK 297
Query: 297 SILVIEDIDCSVDLPDRRNGNENNADAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNF 356
SI+VIEDIDCS+ L R + N + + + G +TLSGLLNF
Sbjct: 298 SIIVIEDIDCSISLTKRGKNKKKNGSYEYDPG--LTNGSGLEEPGSS----VTLSGLLNF 351
Query: 357 IDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYCGPYGFRLLAANYLGIT- 415
DGLWS CG E+I VFTTNH E+LD AL+R GRMDMH+HM +C ++L NYL +
Sbjct: 352 TDGLWSCCGSEKIFVFTTNHIEKLDSALMRSGRMDMHVHMGFCKFPALKILLKNYLRLEE 411
Query: 416 -DCEHKLVAEIETLLKTINITPAQVAEQFMKSE-DAD 450
D + ++ E+E ++ ITPA V+E +++ DA+
Sbjct: 412 EDMDSVVLKEMEECVEEAEITPADVSEVLIRNRSDAE 448
>TAIR|locus:2178067 [details] [associations]
symbol:AATP1 "AAA-ATPase 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0010154
"fruit development" evidence=IMP] [GO:0010431 "seed maturation"
evidence=IMP] [GO:0001666 "response to hypoxia" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010310 "regulation of
hydrogen peroxide metabolic process" evidence=RCA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005783 GO:GO:0005739 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016887
eggNOG:COG0465 GO:GO:0010431 EMBL:AB010077 InterPro:IPR025753
Pfam:PF14363 HOGENOM:HOG000237995 IPI:IPI00538441
RefSeq:NP_198817.1 UniGene:At.65609 ProteinModelPortal:Q9FLD5
SMR:Q9FLD5 PRIDE:Q9FLD5 EnsemblPlants:AT5G40010.1 GeneID:833998
KEGG:ath:AT5G40010 TAIR:At5g40010 InParanoid:Q9FLD5 OMA:HEEITDE
PhylomeDB:Q9FLD5 ProtClustDB:CLSN2685235 Genevestigator:Q9FLD5
Uniprot:Q9FLD5
Length = 514
Score = 809 (289.8 bits), Expect = 1.4e-80, P = 1.4e-80
Identities = 185/502 (36%), Positives = 285/502 (56%)
Query: 19 SMTASLMLFRSMANDFLPEPVRNY---ACFAFRYFFKPRSKELTLVIEDSNGIARNQIFE 75
S ASL+ ++ F P +R + + F P ++T R+ +++
Sbjct: 13 SALASLVFIYTIFERFFPYRLREHFEPLAQSLIGFIYPYI-QITFHEYSGERFKRSDVYD 71
Query: 76 AAEAYLSAKIGPSIERLKICKTPNEKVITIRLEKNEQIIDSFRGVQLRWRFALVEAADGK 135
A ++YLS ++L K I + ++ +E+I D F+GV++ W+ ++
Sbjct: 72 AIQSYLSKDSSSRAKKLTANTIKGNKSIILSMDDHEEITDEFQGVKVWWQSKKHQSESRA 131
Query: 136 GNSHSMRPEKRLFELTFHQTHKDMVLNSYLPHVIELAKDMKDKTRVLKMYTLHRVPD--- 192
+ + E R + L FH+ ++++ YL HVI K ++ K R K+Y+ + +
Sbjct: 132 ISFYPKADESRFYMLKFHRRDREVITKKYLNHVISEGKTIEVKNRERKLYSNNPSQNWSG 191
Query: 193 YDAIRWDSVKLEHPATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGP 252
Y +W V EHPATFDTLAME K I DL +F K++YK++G+AWKRGYLL+GP
Sbjct: 192 YKQTKWSHVTFEHPATFDTLAMEYKKKEEIKNDLIKFSNSKDYYKKIGKAWKRGYLLFGP 251
Query: 253 PGTGKSSLVAAMANYLKFDVFDLQLGNVTRDSDLRTLLLSTGNRSILVIEDIDCSVDLPD 312
PGTGKS+++AAMAN L++DV+DL+L V +++LR LL+ T +SI+VIEDIDCS+DL
Sbjct: 252 PGTGKSTMIAAMANLLEYDVYDLELTTVKDNTELRRLLIETSGKSIIVIEDIDCSLDLTG 311
Query: 313 RRNGNENNADAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVF 372
+R ++ + + + + ++ K D KG + TLSGLLNFIDGLWS+CG ERIIVF
Sbjct: 312 QRKQKKDEEEDEDETSPIE-KQMKKDQGENKGSKV-TLSGLLNFIDGLWSACGGERIIVF 369
Query: 373 TTNHKERLDPALLRPGRMDMHIHMSYCGPYGFRLLAANYLGITD-CEHKLVAEIETLLKT 431
TTN ++LDPAL+R GRMD HI MSYCG F++LA NYL + +++L EI+ LL+
Sbjct: 370 TTNFIDKLDPALIRKGRMDKHIEMSYCGFEAFKVLANNYLDAKEEDDNELFDEIKRLLEV 429
Query: 432 --INITPAQVAEQFMKS---EDADVXXXXXXXXXXXXXRNGSGDVDGDEDEINLDEVAIL 486
I +TPA V E +K E ++ ++ DE++ +E I
Sbjct: 430 EEIKMTPADVGENLLKKSEVETKEICLKRLIEALKEEKEEAKRRIE-DEEKKKKEEEEIK 488
Query: 487 ----ESKKLKTQDQIQDKGKET 504
E KK+K +++ + + ET
Sbjct: 489 RKKREEKKIKKEEKEEKEENET 510
>TAIR|locus:2095512 [details] [associations]
symbol:AT3G28580 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IEP;RCA]
[GO:0005783 "endoplasmic reticulum" evidence=IDA] [GO:0009723
"response to ethylene stimulus" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005783 GO:GO:0005524 GO:GO:0009737
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG0465
GO:GO:0017111 EMBL:AP000420 HSSP:Q9LCZ4 InterPro:IPR025753
Pfam:PF14363 HOGENOM:HOG000237995 ProtClustDB:CLSN2685235
EMBL:AY072076 IPI:IPI00523143 RefSeq:NP_189499.1 UniGene:At.42770
ProteinModelPortal:Q9LJJ7 SMR:Q9LJJ7 STRING:Q9LJJ7
EnsemblPlants:AT3G28580.1 GeneID:822488 KEGG:ath:AT3G28580
TAIR:At3g28580 InParanoid:Q9LJJ7 OMA:PRSKTKD PhylomeDB:Q9LJJ7
ArrayExpress:Q9LJJ7 Genevestigator:Q9LJJ7 Uniprot:Q9LJJ7
Length = 500
Score = 806 (288.8 bits), Expect = 2.9e-80, P = 2.9e-80
Identities = 178/442 (40%), Positives = 258/442 (58%)
Query: 13 LFATYASMTASLMLFRSMANDFLPEPVRNYACFAFRYF--FKPRSKELTLVIEDSNGIAR 70
L+ S A+LM ++ F P F +R F F P ++T R
Sbjct: 7 LWTNTGSALATLMFVYTIFKQFFPLFGPQLEPFLYRLFGRFYPYI-QITFHEYSGEHFKR 65
Query: 71 NQIFEAAEAYLSAKIGPSIERLKICKTPNEKVITIRLEKNEQIIDSFRGVQLRWRFALVE 130
++ + ++YLS ++LK T K I + ++ E+I D F G+++ W+
Sbjct: 66 SEAYLGIQSYLSKDSSARAKKLKANTTKGSKSIVLSMDDKEEITDDFEGIRVWWQSKKEG 125
Query: 131 AADGKGNSHSMRPEKRLFELTFHQTHKDMVLNSYLPHVIELAKDMKDKTRVLKMYTLHRV 190
A + + EKR + L FH+ +++++ YL HV+ K ++ K R K+Y+
Sbjct: 126 ATRQSFSFYPEANEKRYYMLRFHRRDREVIIERYLEHVMREGKTIEQKNRERKLYSNTPG 185
Query: 191 PDY-DAIRWDSVKLEHPATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLL 249
+ + +W V EHPATFDTLAME + K I DL +F + K++YK++G+AWKRGYLL
Sbjct: 186 QSHGNNSKWSHVTFEHPATFDTLAMEENKKEEIKSDLIKFSKSKDYYKKIGKAWKRGYLL 245
Query: 250 YGPPGTGKSSLVAAMANYLKFDVFDLQLGNVTRDSDLRTLLLSTGNRSILVIEDIDCSVD 309
+GPPGTGKS+++AAMAN+L++DV+DL+L V ++ LR LL+ T +SI+VIEDIDCS++
Sbjct: 246 FGPPGTGKSTMIAAMANFLEYDVYDLELTTVKDNTHLRRLLIETSAKSIIVIEDIDCSLN 305
Query: 310 LP-DRRNGNENNADAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDER 368
L R+ E D K +K G + +TLSGLLNFIDGLWS+CG ER
Sbjct: 306 LTGQRKKKEEEEEDGDDK--NTIEKKMMMKNEGENKESKVTLSGLLNFIDGLWSACGGER 363
Query: 369 IIVFTTNHKERLDPALLRPGRMDMHIHMSYCGPYGFRLLAANYLGITDCEHKLVAEIETL 428
IIVFTTN ++LDPAL+R GRMD HI MSYC F++LA NYL + + E + EI+ L
Sbjct: 364 IIVFTTNFVDKLDPALIRKGRMDKHIEMSYCCFEAFKVLAKNYLDVEESE--MFEEIKRL 421
Query: 429 LKT--INITPAQVAEQFM-KSE 447
L+ I +TPA V E + KSE
Sbjct: 422 LEVEEIKMTPADVGENLLPKSE 443
>TAIR|locus:2095537 [details] [associations]
symbol:AT3G28610 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042991 "transcription factor import into nucleus"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
eggNOG:COG0465 GO:GO:0017111 EMBL:AP000420 InterPro:IPR025753
Pfam:PF14363 HOGENOM:HOG000237995 IPI:IPI00535388
RefSeq:NP_189502.2 UniGene:At.50994 ProteinModelPortal:Q9LJJ5
SMR:Q9LJJ5 DNASU:822491 EnsemblPlants:AT3G28610.1 GeneID:822491
KEGG:ath:AT3G28610 TAIR:At3g28610 InParanoid:Q9LJJ5 OMA:KETNIAP
PhylomeDB:Q9LJJ5 ProtClustDB:CLSN2685234 Genevestigator:Q9LJJ5
Uniprot:Q9LJJ5
Length = 474
Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
Identities = 167/386 (43%), Positives = 238/386 (61%)
Query: 71 NQIFEAAEAYLSAKIGPSIERLKICKTPNEKVITIRLEKNEQIIDSFRGVQLRWRFALVE 130
N F+ E YL AK + L+ + K + ++ ++ + + D + G+++ W
Sbjct: 74 NHAFDPIETYLGAKATDKAKHLRASQVRESKGLVLKRDETK-VRDEYEGIRVWWEME--- 129
Query: 131 AADGKGNSHSMRPEKRLFELTFHQTHKDMVLNSYLPHVIELAKDMKDKTRVLKMYTLHRV 190
D G K L +LTFH+ +D+V NSY+ +V+E K + K + +K++T +
Sbjct: 130 -TDSAGY-------KTL-KLTFHRRSRDIVTNSYIKYVVEEGKSIDAKNKKMKLFTNNPS 180
Query: 191 PDYDAIR---WDSVKLEHPATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGY 247
+ + + W + EHPATF+TLAM+P K I+ DL F K++YK++G+AWKRGY
Sbjct: 181 SHWGSSKTSFWRYIDFEHPATFETLAMDPKKKEQILNDLAAFNNGKDYYKKIGKAWKRGY 240
Query: 248 LLYGPPGTGKSSLVAAMANYLKFDVFDLQLGNVTRDSDLRTLLLSTGNRSILVIEDIDCS 307
LLYGPPGTGKS+++AAMAN L + ++DL+L + +S+LR +L +T N+SI+VIEDIDCS
Sbjct: 241 LLYGPPGTGKSTMIAAMANLLNYSIYDLELTAIQNNSELRKILTATSNKSIIVIEDIDCS 300
Query: 308 VDLPDRRNGNENNADAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDE 367
+DL +R E+N K +NK+ +TLSGLLNFIDG+WS+CG E
Sbjct: 301 LDLTGKRKKKESNLMIWRKDGDQDNEENKS---------FVTLSGLLNFIDGIWSACGQE 351
Query: 368 RIIVFTTNHKERLDPALLRPGRMDMHIHMSYCGPYGFRLLAANYLGITDCEHKLVAEIET 427
RIIVFTTNH +LDPAL+R GRMDMHI +SYC F+ LA NYL + H L ++IE+
Sbjct: 352 RIIVFTTNHLAKLDPALIRRGRMDMHIELSYCTFEAFKTLAKNYLDLDS--HPLFSKIES 409
Query: 428 LLKTINITPAQVAEQFMKSE---DAD 450
L+K NI PA VAE MK DAD
Sbjct: 410 LMKETNIAPADVAENLMKKNRETDAD 435
>TAIR|locus:2095502 [details] [associations]
symbol:AT3G28570 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002686 GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363
IPI:IPI00542062 RefSeq:NP_189498.1 UniGene:At.53543
ProteinModelPortal:F4J0B7 SMR:F4J0B7 EnsemblPlants:AT3G28570.1
GeneID:822487 KEGG:ath:AT3G28570 OMA:IHAMELE Uniprot:F4J0B7
Length = 451
Score = 481 (174.4 bits), Expect = 3.6e-78, Sum P(2) = 3.6e-78
Identities = 110/299 (36%), Positives = 172/299 (57%)
Query: 50 FFKPRSKELTLVIEDSNGIARNQIFEAAEAYLSAKIGPSIERLKICKTPNEKVITIRLEK 109
FF P + + + G N F A + YL AK+ ++ LK + + ++ +
Sbjct: 55 FFSPYAY---IRFREIEGYRYNYAFAAVKTYLGAKVNSEVKNLKGNQVKENMSLDLKRD- 110
Query: 110 NEQIIDSFRGVQLRWR-FALVEAADGKGNSHSMRPEKRLFELTFHQTHKDMVLNSYLPHV 168
+ +I + + GV++ W F V KG K++ LTFH+++ D+V SYL +V
Sbjct: 111 DVKIEEEYEGVKMWWEIFRCV-----KG--------KKICRLTFHRSNWDVVTGSYLRYV 157
Query: 169 IELAKDMKDKTRVLKMYTLHRVPDYD---AIR--WDSVKLEHPATFDTLAMEPDLKATIM 223
+E K +K + + K+ L P + +++ W + EHPATFDTLAM+ D K I
Sbjct: 158 VEEGKSIKARKK--KVMVLMNNPSLNWKTSMKGLWTCTEFEHPATFDTLAMDIDKKDEIF 215
Query: 224 EDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLGNVTRD 283
DL F KE+Y R+G+AWKRGYLLYGPPGTGKS+++AAMAN +K++++DL+L ++ +
Sbjct: 216 RDLVAFRDGKEYYDRIGKAWKRGYLLYGPPGTGKSTMIAAMANLMKYNIYDLELTSIGNN 275
Query: 284 SDLRTLLLSTGNRSILVIEDIDCSVDLPDRRNGNENNADAQSKAAGAAVRKNKTDFAGG 342
+L+ LL++T N+SI+VIEDIDCS+DL R + D + K + A +F G
Sbjct: 276 WELKKLLIATTNKSIIVIEDIDCSLDLTGEREVKDLKGDKEGKKSNAVTLSGLLNFIDG 334
Score = 324 (119.1 bits), Expect = 3.6e-78, Sum P(2) = 3.6e-78
Identities = 65/106 (61%), Positives = 76/106 (71%)
Query: 342 GKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYCGP 401
GK + +TLSGLLNFIDG+WS+CG ERI+VFTTNH +LD AL+R GRMDMHI +SYC
Sbjct: 317 GKKSNAVTLSGLLNFIDGIWSACGQERILVFTTNHVGKLDQALIRRGRMDMHIELSYCTF 376
Query: 402 YGFRLLAANYLGITDCEHKLVAEIETLLKTINITPAQVAEQFMKSE 447
F++LA NYL I H L EIE+LLK ITPA VAE M E
Sbjct: 377 GAFKILAKNYLNIDS--HHLFGEIESLLKETKITPADVAEHMMAKE 420
>TAIR|locus:2178057 [details] [associations]
symbol:AT5G40000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005886
GO:GO:0005524 EMBL:CP002688 GO:GO:0017111 InterPro:IPR025753
Pfam:PF14363 IPI:IPI00516295 RefSeq:NP_198816.1 UniGene:At.51146
ProteinModelPortal:F4KFX5 SMR:F4KFX5 EnsemblPlants:AT5G40000.1
GeneID:833997 KEGG:ath:AT5G40000 OMA:ISAMANY Uniprot:F4KFX5
Length = 470
Score = 785 (281.4 bits), Expect = 4.8e-78, P = 4.8e-78
Identities = 172/416 (41%), Positives = 252/416 (60%)
Query: 44 CFAFR---YFFKPRSKELTLVIEDSNGIARNQIFEAAEAYLSAKIGPSIERLKICKTPNE 100
CFA R +F S + + +S+ + NQ F A + YL +K + L+ +
Sbjct: 49 CFAQRVSDHFTNLFSPYVEIHFPESDEYSFNQAFSAIDTYLDSKATDKTKHLRGSQVKES 108
Query: 101 KVITIRLEKNE-QIIDSFRGVQLRWRFALVEAADGKGNSHSMRPEKRLFELTFHQTHKDM 159
K + L++NE ++ D ++G + W D GN R ++LTFH + +
Sbjct: 109 KGLV--LKRNEAKVRDEYKGANVWWE----RVVDNDGN--------RYYKLTFHNRARTL 154
Query: 160 VLNSYLPHVIELAKDMKDKTRVLKMYTLHRVPD--YDAIRWDSVKLEHPATFDTLAMEPD 217
+ NSY+ +V+E K + K + +++T + + W S++ EHPA+F TLAM+P
Sbjct: 155 ITNSYIKYVVEEGKSIIVKNKQTRLFTNNLSTQWVFGQNMWRSIEFEHPASFQTLAMDPK 214
Query: 218 LKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQL 277
K I+ DL F KE+YK++G+AWKRGYLLYGPPGTGKS++++AMAN L ++++DL+L
Sbjct: 215 KKEEIVNDLIAFSNGKEYYKKIGKAWKRGYLLYGPPGTGKSTMISAMANLLNYNIYDLEL 274
Query: 278 GNVTRDSDLRTLLLSTGNRSILVIEDIDCSVDLPDRRNGNENNADAQSKAAGAAVRKNKT 337
V +S+L+ LL +T ++SI+VIEDIDCS D R E+N+ R K
Sbjct: 275 TAVKNNSELKKLLTATSSKSIIVIEDIDCSADFTSNRIKKESNSRE---------RYGKE 325
Query: 338 DFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMS 397
D K ++ +TLSGLLNFIDG+WS+CG ERI+VFTTNH E+LDPAL+R GRMDMHI +S
Sbjct: 326 D----KDENSVTLSGLLNFIDGIWSACGQERIVVFTTNHLEKLDPALIRRGRMDMHIELS 381
Query: 398 YCGPYGFRLLAANYLGIT-DCEHKLVAEIETLLKTINITPAQVAEQFM-KSEDADV 451
YC F++LA NYL + D H L +EI+ LL+ I+PA VAE M +++ DV
Sbjct: 382 YCTYEAFKILAKNYLDLDGDDAHPLFSEIKALLEETKISPADVAENLMARNQQIDV 437
>TAIR|locus:2098638 [details] [associations]
symbol:AT3G28520 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004
SMART:SM00382 GO:GO:0005739 GO:GO:0009506 GO:GO:0005524
EMBL:CP002686 GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363
IPI:IPI00524283 RefSeq:NP_189493.1 UniGene:At.53541
ProteinModelPortal:F4J0B1 SMR:F4J0B1 PRIDE:F4J0B1
EnsemblPlants:AT3G28520.1 GeneID:822482 KEGG:ath:AT3G28520
OMA:YLENESH ArrayExpress:F4J0B1 Uniprot:F4J0B1
Length = 478
Score = 783 (280.7 bits), Expect = 7.9e-78, P = 7.9e-78
Identities = 168/439 (38%), Positives = 263/439 (59%)
Query: 22 ASLMLFRSMANDFLPEPVRNYACFAFRYF----FKPRSKELTLVIED--SNGIARNQIFE 75
AS+M M F+P +R Y + + F+ S + + + G+++++ ++
Sbjct: 2 ASIMFLWPMYKQFVPYQLREYLENTIQKYLDKLFRRDSNFVYIRFPEYTGEGLSKSRAYD 61
Query: 76 AAEAYLSAKIGPSIERLKICKTPNEKVITIRLEKNEQIIDSFRGVQLRWRFALVEAADGK 135
YLS+ +RLK ++ N K + + L+ +E ++ F+GV + W +V+ D K
Sbjct: 62 EIGNYLSSISTARAKRLKAKESENSKSLVLCLDDDEAVVVVFQGVNVVWSSTVVDKED-K 120
Query: 136 GNSHSMRPEKRLFELTFHQTHKDMVLNSYLPHVIELAKDMKDKTRVLKMYTLHRVPDYDA 195
NS E R LTF H+D++ N+Y+ HV+ K++ K R K+YT + Y +
Sbjct: 121 HNSK----EGRYLTLTFENHHRDIITNTYIDHVLREGKEIALKNRERKLYTNNDSSSYSS 176
Query: 196 I---RWDSVKLEHPATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGP 252
W +V H A+F+TL M+ D K I +DL +F + K++Y++V + WKRGYLL+GP
Sbjct: 177 WWEGLWSNVPFNHHASFETLGMDLDKKEEIKKDLIKFTKGKDYYRKVAKPWKRGYLLFGP 236
Query: 253 PGTGKSSLVAAMANYLKFDVFDLQLGNVTRDSDLRTLLLSTGNRSILVIEDIDCSVDLPD 312
PGTGKS++++A+AN+L++DV+DL+L V +++L+ L+L T +SI+VIEDIDCS++L +
Sbjct: 237 PGTGKSTMISAIANFLEYDVYDLELTTVKDNAELKKLMLDTKGKSIVVIEDIDCSLELTE 296
Query: 313 -RRNGNENNADAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIV 371
R+ E + D + K +++ G + +TLSGLLN IDGLWS+C DE+II+
Sbjct: 297 HRKKKKEEDEDKEEKKEAENLKR-----VSGNNESNVTLSGLLNAIDGLWSACSDEKIII 351
Query: 372 FTTNHKERLDPALLRPGRMDMHIHMSYCGPYGFRLLAANYLGITDCEHKLVAEIETLLKT 431
FTTN + LDPAL+R GRMD HI MSYC F++LA NYL + H L EI LL+
Sbjct: 352 FTTNFVDNLDPALIRRGRMDYHIEMSYCRFEAFKVLAKNYL--ENESHDLYGEIGRLLEE 409
Query: 432 INITPAQVAEQFMKSEDAD 450
++++PA VAE M D D
Sbjct: 410 VDVSPADVAENLMPKSDED 428
>TAIR|locus:2095532 [details] [associations]
symbol:AT3G28600 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002686 GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363
IPI:IPI00518678 RefSeq:NP_189501.2 UniGene:At.42766
ProteinModelPortal:F4J0C0 SMR:F4J0C0 DNASU:822490
EnsemblPlants:AT3G28600.1 GeneID:822490 KEGG:ath:AT3G28600
OMA:TISHRVA ArrayExpress:F4J0C0 Uniprot:F4J0C0
Length = 477
Score = 764 (274.0 bits), Expect = 8.1e-76, P = 8.1e-76
Identities = 163/386 (42%), Positives = 234/386 (60%)
Query: 71 NQIFEAAEAYLSAKIGPSIERLKICKTPNEKVITIRLEKNEQIIDSFRGVQLRWRFALVE 130
N F A E YL AK + L+ + K + ++ ++ + + D + G + W
Sbjct: 75 NHAFAAIETYLGAKATDKAKHLRASQVKESKGLVLKRDETK-VRDEYEGGTVWWEME--- 130
Query: 131 AADGKGNSHSMRPEKRLFELTFHQTHKDMVLNSYLPHVIELAKDMKDKTRVLKMYTLHRV 190
D G R F+LTFH+ +D+V +SY+ +V E K ++ K++ +K++T +
Sbjct: 131 -TDSTGY--------RTFKLTFHRRSRDIVTDSYIKYVFEEGKSIQAKSKQMKLFTNNPS 181
Query: 191 PDYDAIR---WDSVKLEHPATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGY 247
+ + W + EHPA+F TLAM+ K I+ DL F KE+YK++G+AWKRGY
Sbjct: 182 SHWGTSKKSFWRYIDFEHPASFHTLAMDTKKKEEILNDLAAFSNGKEYYKKIGKAWKRGY 241
Query: 248 LLYGPPGTGKSSLVAAMANYLKFDVFDLQLGNVTRDSDLRTLLLSTGNRSILVIEDIDCS 307
LL+GPPGTGKS+++AAMAN+L + ++DL+L + +S+LR LL +T ++SI+VIEDIDCS
Sbjct: 242 LLHGPPGTGKSTMIAAMANHLNYSIYDLELTAIRNNSELRKLLTATSSKSIIVIEDIDCS 301
Query: 308 VDLPDRRNGNENNADAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDE 367
+DL +R E N + ++K+ +TLSGLLNFIDG+WS+CG E
Sbjct: 302 LDLTGKRK-KEKNLMTSREDGEQGTEEDKS---------FVTLSGLLNFIDGIWSACGQE 351
Query: 368 RIIVFTTNHKERLDPALLRPGRMDMHIHMSYCGPYGFRLLAANYLGITDCEHKLVAEIET 427
RII+FTTNH E+LDPAL+R GRMDMHI +SYC F++LA NYL + H L +IE+
Sbjct: 352 RIIIFTTNHFEKLDPALIRRGRMDMHIELSYCSFEAFKILAKNYLDLDT--HPLFKKIES 409
Query: 428 LLKTINITPAQVAEQFMKSE---DAD 450
LLK I PA VAE MK DAD
Sbjct: 410 LLKETKIAPADVAENLMKKNTEIDAD 435
>TAIR|locus:2039981 [details] [associations]
symbol:AT2G46620 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009693 "ethylene biosynthetic process" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002685 GO:GO:0017111 IPI:IPI00525526
RefSeq:NP_182185.2 UniGene:At.19721 ProteinModelPortal:F4IJ77
SMR:F4IJ77 EnsemblPlants:AT2G46620.1 GeneID:819274
KEGG:ath:AT2G46620 OMA:CDDLRAL InterPro:IPR025753 Pfam:PF14363
Uniprot:F4IJ77
Length = 491
Score = 423 (154.0 bits), Expect = 2.0e-63, Sum P(2) = 2.0e-63
Identities = 96/254 (37%), Positives = 144/254 (56%)
Query: 61 VIEDSNGIARNQIFEAAEAYLSA--KIGPS-IERLKICKTPNEKVITIRLEKNEQIIDSF 117
V E ++ + N +++ YL++ I S L K NE I +RL++N+ + D F
Sbjct: 53 VPEFNDNVQENHLYQKVYMYLNSLSSIENSDFTNLFTGKKSNE--IILRLDRNQVVGDEF 110
Query: 118 RGVQLRWRFALVEAADGKGNSHSMRPEKRLFELTFHQTHKDMVLNSYLPHVIELAKDMKD 177
G ++ W + D G R F L + K +L SYL H+ ++ +++
Sbjct: 111 LGARVCW----INGEDEDG--------ARNFVLKIRKADKRRILGSYLQHIHTVSDELEQ 158
Query: 178 KTRVLKMYTLHRVPDY------DAIRWDSVKLEHPATFDTLAMEPDLKATIMEDLDRFVR 231
+ LK++ + D+ RW S+ +HP TFD +AME DLK + DL+ F++
Sbjct: 159 RNTELKLFINVGIDDHLNKKKKKNGRWRSIPFDHPCTFDNIAMETDLKNKVKSDLESFLK 218
Query: 232 RKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLGNVTRDSDLRTLLL 291
K++Y R+GR WKR YLLYGP GTGKSS VAAMAN+L +DV+D+ L V DSDL+ LLL
Sbjct: 219 GKQYYNRLGRVWKRSYLLYGPSGTGKSSFVAAMANFLDYDVYDIDLSKVVDDSDLKMLLL 278
Query: 292 STGNRSILVIEDID 305
T +S++VIED+D
Sbjct: 279 QTRGKSVIVIEDLD 292
Score = 242 (90.2 bits), Expect = 2.0e-63, Sum P(2) = 2.0e-63
Identities = 47/104 (45%), Positives = 72/104 (69%)
Query: 348 LTLSGLLNFIDGLWSSC-GDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYCGPYGFRL 406
+ LSG+LNF D + SSC DERI+VFT KE++DPA+LRPGR+D+HIH C F+
Sbjct: 302 VNLSGILNFTDSILSSCTADERIMVFTMTGKEQIDPAMLRPGRVDVHIHFPLCDFTAFKT 361
Query: 407 LAANYLGITDCEHKLVAEIETLLKT-INITPAQVAEQFMKSEDA 449
LA NYLG+ EHKL +++E + + +++PA++ E + + ++
Sbjct: 362 LANNYLGVK--EHKLFSQVEGIFQNGASLSPAEIGELMIANRNS 403
>TAIR|locus:2115954 [details] [associations]
symbol:AT4G05380 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002687 GenomeReviews:CT486007_GR HSSP:Q01853 eggNOG:COG0465
GO:GO:0017111 EMBL:AL161503 HOGENOM:HOG000237995 IPI:IPI00526918
PIR:F85067 RefSeq:NP_192447.1 UniGene:At.54165
ProteinModelPortal:Q9M0V7 SMR:Q9M0V7 STRING:Q9M0V7 PaxDb:Q9M0V7
PRIDE:Q9M0V7 EnsemblPlants:AT4G05380.1 GeneID:825886
KEGG:ath:AT4G05380 TAIR:At4g05380 InParanoid:Q9M0V7 OMA:DETEYGE
PhylomeDB:Q9M0V7 ProtClustDB:CLSN2916038 Genevestigator:Q9M0V7
Uniprot:Q9M0V7
Length = 248
Score = 640 (230.4 bits), Expect = 1.1e-62, P = 1.1e-62
Identities = 134/239 (56%), Positives = 168/239 (70%)
Query: 214 MEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVF 273
MEP+LK T++ DLD F K+F+K VGRAWKRGYLLYGPPGTGKSSLVAA+AN++ + ++
Sbjct: 1 MEPELKNTLIRDLDAFSNGKDFFKTVGRAWKRGYLLYGPPGTGKSSLVAAIANFMNYSIY 60
Query: 274 DLQLGNVTRDSDLRTLLLSTGNRSILVIEDIDCS-VDLPDRRNGNENNADAQSKAAGAAV 332
DLQ+ +V D+ LR +L ST NRSIL+IED+DCS D R+ EN + + G
Sbjct: 61 DLQIQSVKDDAMLRQILTSTENRSILLIEDLDCSGADTTCRK---ENKDETEY---GENQ 114
Query: 333 RKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDM 392
K K K +TLSGLLNF+DGLWSSC +ERII+FTTNHKE+LDPALLRPGRMD+
Sbjct: 115 NKKK------KKDPKVTLSGLLNFVDGLWSSCVEERIIIFTTNHKEKLDPALLRPGRMDV 168
Query: 393 HIHMSYCGPYGFRLLAANYLGITDCEHKLVAEIETLLKTINITPAQVAEQFMKSEDADV 451
HI M YC P F+ LAA YL I EH+L IE + + TPA++ E+ M S+D DV
Sbjct: 169 HILMDYCTPIVFKKLAALYLEIE--EHELFDPIEKMFLEVKATPAEITEKLMVSKDPDV 225
>TAIR|locus:2086591 [details] [associations]
symbol:AT3G29800 species:3702 "Arabidopsis thaliana"
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524 EMBL:CP002686
EMBL:AP000736 HOGENOM:HOG000237995 IPI:IPI00525495
RefSeq:NP_189629.1 UniGene:At.53586 ProteinModelPortal:Q9LJ50
SMR:Q9LJ50 IntAct:Q9LJ50 PRIDE:Q9LJ50 EnsemblPlants:AT3G29800.1
GeneID:822695 KEGG:ath:AT3G29800 TAIR:At3g29800 InParanoid:Q9LJ50
PhylomeDB:Q9LJ50 ArrayExpress:Q9LJ50 Genevestigator:Q9LJ50
Uniprot:Q9LJ50
Length = 440
Score = 405 (147.6 bits), Expect = 1.1e-58, Sum P(2) = 1.1e-58
Identities = 85/207 (41%), Positives = 134/207 (64%)
Query: 103 ITIRLEKNEQIIDSFRGVQLRWRFALVEAADGKGNSHSMRPEKRLFELTFHQTHKDMVLN 162
I + + + D ++G +L+WR V+ K N ++ P K+ FEL F + H+D+V +
Sbjct: 69 INLDFVEEREFDDIYQGAKLKWRI-FVD----KNNIGNI-P-KQCFELRFDEKHRDLVFD 121
Query: 163 SYLPHVIELAKDMKDKTRVLKMYTLHRVPDYDAIRWDSVKLEHPATFDTLAMEPDLKATI 222
SY+P V AK++K K R+L+M+T D W++ L+H ++F+T+ M+ DLK +
Sbjct: 122 SYIPFVESKAKEIKSKKRILEMHTYSHCCD----TWETKILDHHSSFETIVMKEDLKRRL 177
Query: 223 MEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLGNVTR 282
++D+D F+ +++FYKRVGR W R YLL+G PG GK+SLVAA+A YL FDV+++ G V
Sbjct: 178 IDDIDLFISKEDFYKRVGRHWMRYYLLHGLPGAGKTSLVAAIAKYLNFDVYNITQG-VKT 236
Query: 283 DSDLRTLLLSTGNRSILVIEDIDCSVD 309
D D R L+ + SIL++EDID S++
Sbjct: 237 DFDTRRLIRRVEDSSILLVEDIDTSLE 263
Score = 215 (80.7 bits), Expect = 1.1e-58, Sum P(2) = 1.1e-58
Identities = 48/107 (44%), Positives = 69/107 (64%)
Query: 348 LTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYCGPYGFRLL 407
+ LS LL+ + WS+ G R+++FTTN+KER D LL RM+M I+M +C F+ L
Sbjct: 267 VALSQLLSSLTWPWSN-GKARVVIFTTNNKERFDQTLLC--RMEMKIYMGHCCFEDFKTL 323
Query: 408 AANYLGIT---DCEHKLVAEIETLLKTINITPAQVAEQFMKSEDADV 451
A+NYLGI+ D H+L +I+ L+ +TP QV E+ MKS+D DV
Sbjct: 324 ASNYLGISHDNDAPHRLYPDIKRLIDGQAVTPGQVVEELMKSQDVDV 370
>DICTYBASE|DDB_G0291910 [details] [associations]
symbol:bcs1lB "mitochondrial chaperone BCS1"
species:44689 "Dictyostelium discoideum" [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0051131 "chaperone-mediated protein complex
assembly" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IEA;ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0291910
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GenomeReviews:CM000155_GR
GO:GO:0005743 GO:GO:0016887 EMBL:AAFI02000186 eggNOG:COG0465
GO:GO:0051131 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 RefSeq:XP_629907.1 STRING:Q54DY9
EnsemblProtists:DDB0266726 GeneID:8628408 KEGG:ddi:DDB_G0291910
KO:K08900 OMA:RDKSYQW Uniprot:Q54DY9
Length = 458
Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
Identities = 95/287 (33%), Positives = 155/287 (54%)
Query: 167 HVIELAKDM---KDKTRVLKMYTLHRVPDYDAIRWDSVKLEHPATFDTLAMEPDLKATIM 223
++IE AK+M K++ + L +YT D R+ + + P + ++ ++ I+
Sbjct: 167 NLIEEAKEMALEKEEGKTL-IYTSMGT---DWRRFGHPRRKRPIS--SVILDKGKSELII 220
Query: 224 EDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQL-GNVTR 282
+D+ +F+ ++Y G ++RGYLLYGPPGTGKSS + A+A L+ + L L G
Sbjct: 221 QDVKKFLNNSDWYNDRGIPYRRGYLLYGPPGTGKSSFITALAGELQLSICILNLAGKSVS 280
Query: 283 DSDLRTLLLSTGNRSILVIEDIDCSVDLPDRR-NGNENNADAQSKAAGAAVRK----NKT 337
D+ L LL + RSI+++EDID ++ + + N+A+A S ++G + N +
Sbjct: 281 DTSLNQLLATAPQRSIILLEDIDSAIQTGNHDLSAKSNSANAPSISSGGLQYQGYYGNPS 340
Query: 338 DFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMS 397
+GG LT SGLLN +DG+ +S G RI+ TTNH E+LD L+RPGR+D+ I +
Sbjct: 341 VSSGGSA---LTFSGLLNALDGVAASEG--RILFMTTNHLEKLDKVLIRPGRVDLQIEIG 395
Query: 398 YCGPYGFRLLAANYLGITDCEHKLVAEIETLLKTINITPAQVAEQFM 444
C Y + + TD + L + L+ +PAQ+ FM
Sbjct: 396 LCSSYQMEQMFLKFYP-TDFD--LAKQFVEKLENYKFSPAQLQAYFM 439
>DICTYBASE|DDB_G0286765 [details] [associations]
symbol:DDB_G0286765 "BCS1-like protein" species:44689
"Dictyostelium discoideum" [GO:0034551 "mitochondrial respiratory
chain complex III assembly" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR027243 Pfam:PF00004 SMART:SM00382
dictyBase:DDB_G0286765 GO:GO:0005524 EMBL:AAFI02000089
eggNOG:COG0465 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 RefSeq:XP_637666.1
ProteinModelPortal:Q54L95 EnsemblProtists:DDB0229898 GeneID:8625806
KEGG:ddi:DDB_G0286765 InParanoid:Q54L95 OMA:SISIMNM Uniprot:Q54L95
Length = 574
Score = 214 (80.4 bits), Expect = 6.3e-29, Sum P(3) = 6.3e-29
Identities = 48/173 (27%), Positives = 95/173 (54%)
Query: 149 ELTFHQTHKDMVLNSYLPHVIELAKDM-KDKTRVLKMYTLHRVPDYDAIRWDSVKLEHPA 207
++T + +K+ ++NS L +E + + KDKT K+Y+L D + W+ + ++
Sbjct: 194 DVTVYGGNKN-IINSILETAVEYSVTLNKDKT---KIYSL----DQSSTFWECIACQNKR 245
Query: 208 TFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANY 267
D++ ++ ++ ++ DL F+ K++Y G ++RGYLLYGPPG+GK+S + +MA
Sbjct: 246 LVDSVFLDENISEKVVNDLTNFIHGKKWYTDTGVPYRRGYLLYGPPGSGKTSFILSMAGN 305
Query: 268 LKFDVFDLQLGNVTRDSDLRTLLLSTGNRSILVIEDIDCSVDLPDRRNGNENN 320
+ + + D ++ +++ +ILV+EDID +V + + N N
Sbjct: 306 FGKSISIMNMSKGIHDGNIHSIIQKCNKDTILVLEDID-AVFVKRKNNSAAGN 357
Score = 181 (68.8 bits), Expect = 6.3e-29, Sum P(3) = 6.3e-29
Identities = 45/111 (40%), Positives = 62/111 (55%)
Query: 334 KNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMH 393
K K + A G +LT SGLLN IDGL SS D RI++ TTNH ERL PAL+RPGR+D+
Sbjct: 348 KRKNNSAAGND--VLTFSGLLNAIDGLASS--DGRILMMTTNHLERLSPALIRPGRIDLK 403
Query: 394 IHMSYCGPYGFRLLAANYLGITDCEHKLVAEIETLLKTINITPAQVAEQFM 444
+ Y + L+ + H L+ I + L+ I+ AQ+ F+
Sbjct: 404 VKFDYASNHQIELMFKRFFD--QKYHYLIDSINSKLENHQISTAQLQGWFI 452
Score = 43 (20.2 bits), Expect = 6.3e-29, Sum P(3) = 6.3e-29
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 109 KNEQIIDSFRGVQLRWRFALVEAADG 134
K + I RGV + R+ VE+ DG
Sbjct: 126 KQDSTIIGTRGVSVMTRYQNVESEDG 151
>ASPGD|ASPL0000063397 [details] [associations]
symbol:AN7549 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 EMBL:AACD01000129 EMBL:BN001304
eggNOG:COG0465 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
RefSeq:XP_680818.1 ProteinModelPortal:Q5AVY1
EnsemblFungi:CADANIAT00000655 GeneID:2869406 KEGG:ani:AN7549.2
HOGENOM:HOG000165936 OMA:RPLAFIR OrthoDB:EOG4BK8C9 Uniprot:Q5AVY1
Length = 650
Score = 327 (120.2 bits), Expect = 5.4e-27, P = 5.4e-27
Identities = 80/229 (34%), Positives = 127/229 (55%)
Query: 176 KDKTRVLKMYTLHRVPDYDAIRWDSVKLEHPATFDTLAMEPDLKATIMEDLDRFV--RRK 233
KDK + +Y H+ Y W P T+ ++ K ++D+ ++ R +
Sbjct: 243 KDKNNTV-IYRGHKSGSYT--EWSRCMARAPRALSTVVLDKAQKDAFIDDIKDYLHPRTR 299
Query: 234 EFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLGNVTRDSD-LRTLLLS 292
+Y G ++RGYLL+GPPGTGK+SL A A L +++ L L + + D D L L
Sbjct: 300 RWYNNRGIPYRRGYLLHGPPGTGKTSLCFAAAGLLGLELYLLNLSSKSLDEDELMALFTD 359
Query: 293 TGNRSILVIEDIDCSVDLPDRRNGNENNADAQSKAAGAAVRKNKTDFAG----GKG---Q 345
R I+++ED+DC+ R G+ +N D + A+ + + + +G G G +
Sbjct: 360 LPTRCIVLLEDVDCAGMSQKRTPGSSSNDDNGNSASPELQEQGEGNSSGTTTGGTGVFEK 419
Query: 346 HMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
++LSGLLN IDG+ ++C + RI+V TTNH E+LDPAL+RPGR+D+ I
Sbjct: 420 QGVSLSGLLNVIDGV-AAC-EGRILVMTTNHPEKLDPALVRPGRIDLSI 466
>UNIPROTKB|G4MXF6 [details] [associations]
symbol:MGG_15496 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:CM001232 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
RefSeq:XP_003713293.1 EnsemblFungi:MGG_15496T0 GeneID:12986165
KEGG:mgr:MGG_15496 Uniprot:G4MXF6
Length = 676
Score = 307 (113.1 bits), Expect = 1.3e-24, P = 1.3e-24
Identities = 74/220 (33%), Positives = 123/220 (55%)
Query: 193 YDAIRWDSVKLEHPATFDTLAMEPDLKATIMEDLDRFV--RRKEFYKRVGRAWKRGYLLY 250
Y+ WDS L T+ + +K ++ D+ ++ ++FY + G ++RGYLL+
Sbjct: 237 YNGAHWDSTILRPTRPIQTVHFDEQVKKDLIADIINYLDPHTRDFYHQRGIPYRRGYLLH 296
Query: 251 GPPGTGKSSLVAAMANYLKFDVFDLQLGNVTRDSDLRTLLLSTGNRSILVIEDIDCSVDL 310
GPPGTGK+SL A+A+ K +++ L + ++ D +L ++ R I+++EDID +V +
Sbjct: 297 GPPGTGKTSLSLALASMFKLELYLLHVPSLANDGELESMFDELPPRCIILLEDID-AVGI 355
Query: 311 PDRRNGNENNADAQSKAAGAAVR---KNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDE 367
P RRN + ++ G + ++ D G G+ TLSGLLN +DG+ S G
Sbjct: 356 P-RRN------ELAARMTGLDDKDDDEDDEDEENGSGRGRSTLSGLLNVLDGVASQEG-- 406
Query: 368 RIIVFTTNHKERLDPALLRPGRMDMHIHMSYCGPYGFRLL 407
RI+ T+N ++LDPAL+RPGR+D I + RL+
Sbjct: 407 RIVFMTSNLADKLDPALVRPGRIDRKIFLGNINQESARLM 446
>SGD|S000002783 [details] [associations]
symbol:BCS1 "Protein translocase and chaperone required for
Complex III assembly" species:4932 "Saccharomyces cerevisiae"
[GO:0034551 "mitochondrial respiratory chain complex III assembly"
evidence=IEA;IMP] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA;IDA]
[GO:0005739 "mitochondrion" evidence=IEA;IDA] [GO:0008320 "protein
transmembrane transporter activity" evidence=IMP] [GO:0032979
"protein insertion into mitochondrial membrane from inner side"
evidence=IMP;IPI] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0051131 "chaperone-mediated protein complex assembly"
evidence=IMP;IPI] Reactome:REACT_85873 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000002783
GO:GO:0016021 GO:GO:0005829 GO:GO:0005524 GO:GO:0005743
GO:GO:0005758 EMBL:BK006938 GO:GO:0016887 Reactome:REACT_118590
EMBL:U28373 eggNOG:COG0465 GO:GO:0051131 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
OMA:RDKSYQW GeneTree:ENSGT00390000005415 HOGENOM:HOG000198799
GO:GO:0034551 OrthoDB:EOG4XWK6J EMBL:S47190 PIR:S61170
RefSeq:NP_010663.1 ProteinModelPortal:P32839 SMR:P32839
IntAct:P32839 STRING:P32839 PaxDb:P32839 EnsemblFungi:YDR375C
GeneID:851981 KEGG:sce:YDR375C CYGD:YDR375c NextBio:970127
Genevestigator:P32839 GermOnline:YDR375C GO:GO:0008320
GO:GO:0032979 Uniprot:P32839
Length = 456
Score = 178 (67.7 bits), Expect = 2.2e-24, Sum P(2) = 2.2e-24
Identities = 45/117 (38%), Positives = 66/117 (56%)
Query: 335 NKTDFAGGKGQHM-LTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMH 393
NK G +G H +T SGLLN +DG+ SS +E I TTNH E+LD A++RPGR+D
Sbjct: 326 NKRSQTGEQGFHSSVTFSGLLNALDGVTSS--EETITFMTTNHPEKLDAAIMRPGRIDYK 383
Query: 394 IHMSYCGPYGF-RLLAANYLGITDCEHKLVAEIETLLKTINITPAQVAEQFMKSEDA 449
+ + PY ++ Y G TD K V ++ L I ++ AQ+ F+ ++DA
Sbjct: 384 VFVGNATPYQVEKMFMKFYPGETDICKKFVNSVKEL--DITVSTAQLQGLFVMNKDA 438
Score = 176 (67.0 bits), Expect = 2.2e-24, Sum P(2) = 2.2e-24
Identities = 47/143 (32%), Positives = 78/143 (54%)
Query: 168 VIELAKDMKDKTRVLK--MYTLHRVPDYDAIRWDSVKLEHPATFDTLAMEPDLKATIMED 225
++ AKD+ KT K +YT P++ K P+ ++ +K I++D
Sbjct: 187 ILNEAKDIALKTTEGKTVIYTSFG-PEWRKFGQPKAKRMLPSVI----LDSGIKEGILDD 241
Query: 226 LDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLG-NVTRDS 284
+ F++ ++Y G ++RGYLLYGPPG+GK+S + A+A L +++ L L N D
Sbjct: 242 VYDFMKNGKWYSDRGIPYRRGYLLYGPPGSGKTSFIQALAGELDYNICILNLSENNLTDD 301
Query: 285 DLRTLLLSTGNRSILVIEDIDCS 307
L L+ + RSIL++EDID +
Sbjct: 302 RLNHLMNNMPERSILLLEDIDAA 324
>GENEDB_PFALCIPARUM|PFF0155w [details] [associations]
symbol:PFF0155w "bcs1-like protein, putative"
species:5833 "Plasmodium falciparum" [GO:0005743 "mitochondrial
inner membrane" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0006461 "protein complex assembly" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0006461
GO:GO:0016887 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 OMA:RDKSYQW HOGENOM:HOG000198799 EMBL:AL844505
RefSeq:XP_966022.1 ProteinModelPortal:C6KSN2
EnsemblProtists:PFF0155w:mRNA GeneID:3885965 KEGG:pfa:PFF0155w
EuPathDB:PlasmoDB:PF3D7_0603200 ProtClustDB:CLSZ2429496
Uniprot:C6KSN2
Length = 471
Score = 288 (106.4 bits), Expect = 5.7e-23, P = 5.7e-23
Identities = 71/240 (29%), Positives = 131/240 (54%)
Query: 210 DTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLK 269
+++ + +L I+ D+ F+ ++Y G ++R YLL+GPPG GKSSL+ A+A Y
Sbjct: 217 NSVILPENLNEYIINDIQTFLNSSKWYIDKGIPYRRCYLLHGPPGCGKSSLITALAGYFD 276
Query: 270 FDVFDLQLGNVTRDSDLRTLLLST-GNRSILVIEDID-CSVDLPDRRNGNENNADAQSKA 327
F++ + + ++ D LL+T ++IL++EDID ++ P + N + + + +
Sbjct: 277 FNICTININDIYLTDDRFIHLLATIPPKTILILEDIDFIFINDPIMKYTNNDQNSSSNSS 336
Query: 328 AGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRP 387
+ T G ++ SGLLN +DG+ ++ +ERII TTN+ E+L P L+RP
Sbjct: 337 IFTGTNNHSTIKTLG-----VSYSGLLNALDGIVAT--EERIIFMTTNNIEKLPPTLIRP 389
Query: 388 GRMDMHIHMSYCGPYGFRLLAANYLGITDCEHKLVAEIETLLKTINITPAQVAEQFMKSE 447
GR+DM I + Y Y ++ + +L H+L + + + N++ A++ F+ S+
Sbjct: 390 GRVDMKILIPYANIYQYKKM---FLRFFPEHHELSNKFAKIFQDFNLSMAEIQSFFLFSK 446
>UNIPROTKB|C6KSN2 [details] [associations]
symbol:PFF0155w "Bcs1 protein, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006461 "protein complex assembly" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR027243 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0006461 GO:GO:0016887 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 OMA:RDKSYQW
HOGENOM:HOG000198799 EMBL:AL844505 RefSeq:XP_966022.1
ProteinModelPortal:C6KSN2 EnsemblProtists:PFF0155w:mRNA
GeneID:3885965 KEGG:pfa:PFF0155w EuPathDB:PlasmoDB:PF3D7_0603200
ProtClustDB:CLSZ2429496 Uniprot:C6KSN2
Length = 471
Score = 288 (106.4 bits), Expect = 5.7e-23, P = 5.7e-23
Identities = 71/240 (29%), Positives = 131/240 (54%)
Query: 210 DTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLK 269
+++ + +L I+ D+ F+ ++Y G ++R YLL+GPPG GKSSL+ A+A Y
Sbjct: 217 NSVILPENLNEYIINDIQTFLNSSKWYIDKGIPYRRCYLLHGPPGCGKSSLITALAGYFD 276
Query: 270 FDVFDLQLGNVTRDSDLRTLLLST-GNRSILVIEDID-CSVDLPDRRNGNENNADAQSKA 327
F++ + + ++ D LL+T ++IL++EDID ++ P + N + + + +
Sbjct: 277 FNICTININDIYLTDDRFIHLLATIPPKTILILEDIDFIFINDPIMKYTNNDQNSSSNSS 336
Query: 328 AGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRP 387
+ T G ++ SGLLN +DG+ ++ +ERII TTN+ E+L P L+RP
Sbjct: 337 IFTGTNNHSTIKTLG-----VSYSGLLNALDGIVAT--EERIIFMTTNNIEKLPPTLIRP 389
Query: 388 GRMDMHIHMSYCGPYGFRLLAANYLGITDCEHKLVAEIETLLKTINITPAQVAEQFMKSE 447
GR+DM I + Y Y ++ + +L H+L + + + N++ A++ F+ S+
Sbjct: 390 GRVDMKILIPYANIYQYKKM---FLRFFPEHHELSNKFAKIFQDFNLSMAEIQSFFLFSK 446
>ASPGD|ASPL0000041452 [details] [associations]
symbol:AN3131 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:BN001306 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 OMA:RDKSYQW
HOGENOM:HOG000198799 EnsemblFungi:CADANIAT00009943 Uniprot:C8VII7
Length = 497
Score = 185 (70.2 bits), Expect = 7.8e-23, Sum P(2) = 7.8e-23
Identities = 38/101 (37%), Positives = 61/101 (60%)
Query: 208 TFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANY 267
T D++ ++ +K I+ED+ F+ + +Y G ++RGYLLYGPPGTGKSS + A+A
Sbjct: 248 TLDSVILDKGVKERIVEDVKDFLATESWYHDRGIPYRRGYLLYGPPGTGKSSFIQAVAGE 307
Query: 268 LKFDVFDLQLGNVTRDSD-LRTLLLSTGNRSILVIEDIDCS 307
L +D+ L L D L LL R+++++ED+D +
Sbjct: 308 LDYDIAILNLSERGMTDDRLNRLLTIVPKRTLVLLEDVDAA 348
Score = 155 (59.6 bits), Expect = 7.8e-23, Sum P(2) = 7.8e-23
Identities = 33/64 (51%), Positives = 47/64 (73%)
Query: 333 RKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDM 392
R+ +TD G +G ++ T SGLLN +DG+ S+ +ERI+ TTNH ERLD AL+RPGR+DM
Sbjct: 352 RRTQTDEDGYRGANV-TFSGLLNALDGVASA--EERIVFLTTNHVERLDEALVRPGRVDM 408
Query: 393 HIHM 396
+ +
Sbjct: 409 TVRI 412
>POMBASE|SPAC644.07 [details] [associations]
symbol:SPAC644.07 "mitochondrial Rieske ISP assembly
ATPase (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISS] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0034551 "mitochondrial respiratory chain complex III assembly"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=ISS]
[GO:0043623 "cellular protein complex assembly" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPAC644.07 GO:GO:0016021 GO:GO:0005524 EMBL:CU329670
GO:GO:0005743 GO:GO:0016226 eggNOG:COG0465 GO:GO:0043623
InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
KO:K08900 OMA:RDKSYQW HOGENOM:HOG000198799 EMBL:D89136 PIR:T42406
RefSeq:NP_593875.1 ProteinModelPortal:Q9P6Q3 STRING:Q9P6Q3
EnsemblFungi:SPAC644.07.1 GeneID:2543663 KEGG:spo:SPAC644.07
OrthoDB:EOG4XWK6J NextBio:20804669 GO:GO:0042623 Uniprot:Q9P6Q3
Length = 449
Score = 174 (66.3 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 36/105 (34%), Positives = 63/105 (60%)
Query: 205 HPAT---FDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLV 261
HP + ++ +E ++K I +D+ F+R ++Y G ++RGYLLYGPPG+GK+S +
Sbjct: 200 HPRSKRMLSSVVLESNVKKMITDDVHDFLRNSQWYDTRGIPYRRGYLLYGPPGSGKTSFL 259
Query: 262 AAMANYLKFDVFDLQLGNV-TRDSDLRTLLLSTGNRSILVIEDID 305
A+A L +D+ L L D L LL + ++++++ED+D
Sbjct: 260 YALAGELDYDICVLNLAEKGLTDDRLNHLLSNVPPKAVVLLEDVD 304
Score = 164 (62.8 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 43/114 (37%), Positives = 65/114 (57%)
Query: 340 AGGKGQHM-LTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSY 398
+G G H +T SGLLN +DG+ SS DERII TTNH E+LDPAL+RPGR+D+ ++
Sbjct: 313 SGEVGFHANVTFSGLLNALDGVTSS--DERIIFMTTNHPEKLDPALVRPGRVDVKAYLGN 370
Query: 399 CGPYGFRLLAANYLGITDCEHKLVAEIETLLKTINITPAQVAEQFM--KSEDAD 450
P R + + G + ++ ++ ++ N + A + F+ KS AD
Sbjct: 371 ATPEQVREMFTRFYGHSP---EMADDLSDIVCPKNTSMASLQGLFVMNKSSPAD 421
>RGD|1359658 [details] [associations]
symbol:Bcs1l "BC1 (ubiquinol-cytochrome c reductase)
synthesis-like" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0007005
"mitochondrion organization" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0032981
"mitochondrial respiratory chain complex I assembly"
evidence=IEA;ISO] [GO:0033617 "mitochondrial respiratory chain
complex IV assembly" evidence=IEA;ISO] [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA;ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1359658 GO:GO:0005739 GO:GO:0005524 eggNOG:COG0465
GO:GO:0017111 GO:GO:0032981 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
OMA:RDKSYQW CTD:617 GeneTree:ENSGT00390000005415
HOGENOM:HOG000198799 HOVERGEN:HBG048759 OrthoDB:EOG4TTGJ0
GO:GO:0034551 GO:GO:0033617 EMBL:CH474004 EMBL:BC083660
IPI:IPI00213929 RefSeq:NP_001007667.1 UniGene:Rn.15293
IntAct:Q5XIM0 STRING:Q5XIM0 Ensembl:ENSRNOT00000022632
GeneID:301514 KEGG:rno:301514 UCSC:RGD:1359658 InParanoid:Q5XIM0
NextBio:648873 Genevestigator:Q5XIM0 Uniprot:Q5XIM0
Length = 418
Score = 173 (66.0 bits), Expect = 1.4e-22, Sum P(3) = 1.4e-22
Identities = 43/103 (41%), Positives = 60/103 (58%)
Query: 343 KGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYCGPY 402
+G LT SGLLN +DG+ S+ + RI+ TTNH +RLDPAL+RPGR+D+ ++ YC +
Sbjct: 302 QGLGRLTFSGLLNALDGVAST--EARIVFMTTNHIDRLDPALIRPGRVDLKEYVGYCSHW 359
Query: 403 GF-RLLAANYLGITDCEHKLVAEIETLLKTINITPAQVAEQFM 444
++ Y G + AE L T I+PAQV FM
Sbjct: 360 QLTQMFQRFYPGQAPSLAENFAE-HVLKATSQISPAQVQGYFM 401
Score = 162 (62.1 bits), Expect = 1.4e-22, Sum P(3) = 1.4e-22
Identities = 34/99 (34%), Positives = 59/99 (59%)
Query: 210 DTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLK 269
D++ ++ L I++D+ F+ ++Y G ++RGYLLYGPPG GKSS + A+A L+
Sbjct: 189 DSVVLQQGLADRIVKDIREFIDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITALAGELE 248
Query: 270 FDVFDLQLGNVTRDSDLRTLLLSTG-NRSILVIEDIDCS 307
+ L L + + D LLS +S++++ED+D +
Sbjct: 249 HSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAA 287
Score = 39 (18.8 bits), Expect = 1.4e-22, Sum P(3) = 1.4e-22
Identities = 6/29 (20%), Positives = 17/29 (58%)
Query: 33 DFLPEPVRNYACFAFRYFFKPRSKELTLV 61
+F+P P ++ + ++ R++E+ +V
Sbjct: 96 EFIPSPGNHFIWYQGKWIRVERNREMQMV 124
>ASPGD|ASPL0000007908 [details] [associations]
symbol:AN6397 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:BN001301 eggNOG:COG0465 GO:GO:0017111
InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
EMBL:AACD01000108 OrthoDB:EOG4BK8C9 RefSeq:XP_664001.1
ProteinModelPortal:Q5AZ83 EnsemblFungi:CADANIAT00006582
GeneID:2871293 KEGG:ani:AN6397.2 HOGENOM:HOG000201600 OMA:EEANAYS
Uniprot:Q5AZ83
Length = 518
Score = 286 (105.7 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 73/220 (33%), Positives = 117/220 (53%)
Query: 194 DAIRWDSVKLEHPATFDTLAMEPDLKATIMEDLDRFVRR--KEFYKRVGRAWKRGYLLYG 251
D +RW+ + T+ ++ K +++D+ ++R +++Y G ++RGYL G
Sbjct: 200 DLVRWNRITTRPSRAISTVILDSCKKKAVLDDMREYLREDTRQWYANHGIPYRRGYLFSG 259
Query: 252 PPGTGKSSLVAAMANYLKFDVFDLQL--GNVTRDSDLRTLLLSTGNRSILVIEDIDCSVD 309
PPGTGK+SL +A+A D++ L L N++ LR L + ++++EDID +
Sbjct: 260 PPGTGKTSLSSALAGVFGLDIYVLSLLDPNISESHFLR-LFSEVPTQCVVLLEDIDAA-G 317
Query: 310 LPDRRNGNENNADAQSKAAGAAVRKNKTDFAG--GKGQHMLTLSGLLNFIDGLWSSCGDE 367
+ +R NE A + A+ ++K A ++LS LLN IDG+ S G
Sbjct: 318 MTLKR-ANEEPVTADTTASFDVMKKRARPGAPVPTSPPTPISLSALLNAIDGVSSQEG-- 374
Query: 368 RIIVFTTNHKERLDPALLRPGRMDMHIHMSYCGPYGFRLL 407
RI++ TTN + LDPAL+RPGR+DMHI FR L
Sbjct: 375 RILIMTTNAPQDLDPALIRPGRVDMHIRFELPSRVEFREL 414
>UNIPROTKB|Q9Y276 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9606
"Homo sapiens" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0032981 "mitochondrial
respiratory chain complex I assembly" evidence=IMP] [GO:0007005
"mitochondrion organization" evidence=IMP] [GO:0033617
"mitochondrial respiratory chain complex IV assembly" evidence=IMP]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0034551 "mitochondrial respiratory chain
complex III assembly" evidence=IMP] [GO:0005750 "mitochondrial
respiratory chain complex III" evidence=TAS] Reactome:REACT_17015
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005524 EMBL:CH471063 eggNOG:COG0465
GO:GO:0017111 GO:GO:0032981 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
OMA:RDKSYQW CTD:617 HOGENOM:HOG000198799 HOVERGEN:HBG048759
OrthoDB:EOG4TTGJ0 GO:GO:0034551 GO:GO:0033617 EMBL:AF026849
EMBL:AF346835 EMBL:AF516670 EMBL:AF038195 EMBL:AK096210
EMBL:BX571752 EMBL:BC000416 EMBL:BC007500 IPI:IPI00003985
RefSeq:NP_001073335.1 RefSeq:NP_001244271.1 RefSeq:NP_001244272.1
RefSeq:NP_001244273.1 RefSeq:NP_004319.1 UniGene:Hs.471401
ProteinModelPortal:Q9Y276 SMR:Q9Y276 IntAct:Q9Y276
MINT:MINT-1433080 STRING:Q9Y276 PhosphoSite:Q9Y276 DMDM:46397351
PaxDb:Q9Y276 PeptideAtlas:Q9Y276 PRIDE:Q9Y276 DNASU:617
Ensembl:ENST00000359273 Ensembl:ENST00000392109
Ensembl:ENST00000392110 Ensembl:ENST00000392111
Ensembl:ENST00000412366 Ensembl:ENST00000431802
Ensembl:ENST00000439945 GeneID:617 KEGG:hsa:617 UCSC:uc002vip.3
GeneCards:GC02P219523 HGNC:HGNC:1020 HPA:HPA037700 HPA:HPA037701
MIM:124000 MIM:262000 MIM:603358 MIM:603647 neXtProt:NX_Q9Y276
Orphanet:123 Orphanet:53693 Orphanet:1460 Orphanet:255249
Orphanet:254902 PharmGKB:PA25327 InParanoid:Q9Y276 PhylomeDB:Q9Y276
GenomeRNAi:617 NextBio:2497 ArrayExpress:Q9Y276 Bgee:Q9Y276
CleanEx:HS_BCS1L Genevestigator:Q9Y276 GermOnline:ENSG00000074582
GO:GO:0005750 Uniprot:Q9Y276
Length = 419
Score = 173 (66.0 bits), Expect = 2.4e-22, Sum P(3) = 2.4e-22
Identities = 43/103 (41%), Positives = 60/103 (58%)
Query: 343 KGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYCGPY 402
+G LT SGLLN +DG+ S+ + RI+ TTNH +RLDPAL+RPGR+D+ ++ YC +
Sbjct: 302 QGLGRLTFSGLLNALDGVAST--EARIVFMTTNHVDRLDPALIRPGRVDLKEYVGYCSHW 359
Query: 403 GF-RLLAANYLGITDCEHKLVAEIETLLKTINITPAQVAEQFM 444
++ Y G + AE L T I+PAQV FM
Sbjct: 360 QLTQMFQRFYPGQAPSLAENFAE-HVLRATNQISPAQVQGYFM 401
Score = 159 (61.0 bits), Expect = 2.4e-22, Sum P(3) = 2.4e-22
Identities = 33/99 (33%), Positives = 58/99 (58%)
Query: 210 DTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLK 269
+++ ++ L I+ D+ F+ ++Y G ++RGYLLYGPPG GKSS + A+A L+
Sbjct: 189 NSVVLQQGLADRIVRDVQEFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELE 248
Query: 270 FDVFDLQLGNVTRDSDLRTLLLSTG-NRSILVIEDIDCS 307
+ L L + + D LLS +S++++ED+D +
Sbjct: 249 HSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAA 287
Score = 40 (19.1 bits), Expect = 2.4e-22, Sum P(3) = 2.4e-22
Identities = 6/29 (20%), Positives = 17/29 (58%)
Query: 33 DFLPEPVRNYACFAFRYFFKPRSKELTLV 61
+F+P P ++ + ++ RS+E+ ++
Sbjct: 96 EFVPSPGNHFIWYRGKWIRVERSREMQMI 124
>UNIPROTKB|I3LFK0 [details] [associations]
symbol:BCS1L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0034551 "mitochondrial respiratory chain complex III
assembly" evidence=IEA] [GO:0033617 "mitochondrial respiratory
chain complex IV assembly" evidence=IEA] [GO:0032981 "mitochondrial
respiratory chain complex I assembly" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0017111
GO:GO:0032981 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 OMA:RDKSYQW GeneTree:ENSGT00390000005415
GO:GO:0034551 GO:GO:0033617 Ensembl:ENSSSCT00000027544
Uniprot:I3LFK0
Length = 419
Score = 168 (64.2 bits), Expect = 5.8e-22, Sum P(3) = 5.8e-22
Identities = 41/103 (39%), Positives = 60/103 (58%)
Query: 343 KGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYCGPY 402
+G LT SGLLN +DG+ S+ + RI+ TTNH +RLDPAL+RPGR+D+ ++ +C +
Sbjct: 302 QGLGRLTFSGLLNALDGVAST--EARIVFMTTNHVDRLDPALIRPGRVDLKEYVGHCSRW 359
Query: 403 GF-RLLAANYLGITDCEHKLVAEIETLLKTINITPAQVAEQFM 444
++ Y G + A+ L T I+PAQV FM
Sbjct: 360 QLTQMFQRFYPGQAPSLAESFAD-RALQATTQISPAQVQGYFM 401
Score = 161 (61.7 bits), Expect = 5.8e-22, Sum P(3) = 5.8e-22
Identities = 34/99 (34%), Positives = 58/99 (58%)
Query: 210 DTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLK 269
+++ +E L I+ D+ F+ ++Y G ++RGYLLYGPPG GKSS + A+A L+
Sbjct: 189 NSVVLEQGLADRIVRDIREFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELQ 248
Query: 270 FDVFDLQLGNVTRDSDLRTLLLSTG-NRSILVIEDIDCS 307
+ L L + + D LLS +S++++ED+D +
Sbjct: 249 HSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAA 287
Score = 40 (19.1 bits), Expect = 5.8e-22, Sum P(3) = 5.8e-22
Identities = 6/29 (20%), Positives = 17/29 (58%)
Query: 33 DFLPEPVRNYACFAFRYFFKPRSKELTLV 61
+F+P P ++ + ++ RS+E+ ++
Sbjct: 96 EFVPSPGNHFIWYQGKWIRVERSREMQMI 124
>MGI|MGI:1914071 [details] [associations]
symbol:Bcs1l "BCS1-like (yeast)" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISO;IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0032981
"mitochondrial respiratory chain complex I assembly" evidence=ISO]
[GO:0033617 "mitochondrial respiratory chain complex IV assembly"
evidence=ISO] [GO:0034551 "mitochondrial respiratory chain complex
III assembly" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1914071 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0005743 eggNOG:COG0465 GO:GO:0017111
GO:GO:0032981 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 OMA:RDKSYQW CTD:617
GeneTree:ENSGT00390000005415 HOGENOM:HOG000198799
HOVERGEN:HBG048759 OrthoDB:EOG4TTGJ0 GO:GO:0034551 GO:GO:0033617
EMBL:AK012324 EMBL:AK078925 EMBL:AK079385 EMBL:BC019781
IPI:IPI00112986 RefSeq:NP_080060.1 UniGene:Mm.358700
ProteinModelPortal:Q9CZP5 SMR:Q9CZP5 STRING:Q9CZP5
PhosphoSite:Q9CZP5 PaxDb:Q9CZP5 PRIDE:Q9CZP5 DNASU:66821
Ensembl:ENSMUST00000027358 Ensembl:ENSMUST00000113732
Ensembl:ENSMUST00000113733 GeneID:66821 KEGG:mmu:66821
UCSC:uc007bmq.1 InParanoid:Q9CZP5 NextBio:322735 Bgee:Q9CZP5
CleanEx:MM_BCS1L Genevestigator:Q9CZP5
GermOnline:ENSMUSG00000026172 Uniprot:Q9CZP5
Length = 418
Score = 167 (63.8 bits), Expect = 8.0e-22, Sum P(2) = 8.0e-22
Identities = 42/103 (40%), Positives = 60/103 (58%)
Query: 343 KGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYCGPY 402
+G LT SGLLN +DG+ S+ + RI+ TTN+ +RLDPAL+RPGR+D+ ++ YC +
Sbjct: 302 QGLGRLTFSGLLNALDGVAST--EARIVFMTTNYIDRLDPALIRPGRVDLKEYVGYCSHW 359
Query: 403 GF-RLLAANYLGITDCEHKLVAEIETLLKTINITPAQVAEQFM 444
++ Y G + AE L T I+PAQV FM
Sbjct: 360 QLTQMFQRFYPGQAPSLAENFAE-HVLKATSEISPAQVQGYFM 401
Score = 162 (62.1 bits), Expect = 8.0e-22, Sum P(2) = 8.0e-22
Identities = 34/99 (34%), Positives = 59/99 (59%)
Query: 210 DTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLK 269
D++ ++ L I++D+ F+ ++Y G ++RGYLLYGPPG GKSS + A+A L+
Sbjct: 189 DSVVLQQGLADRIVKDIREFIDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITALAGELE 248
Query: 270 FDVFDLQLGNVTRDSDLRTLLLSTG-NRSILVIEDIDCS 307
+ L L + + D LLS +S++++ED+D +
Sbjct: 249 HSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAA 287
>UNIPROTKB|Q5E9H5 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9913
"Bos taurus" [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0034551 "mitochondrial respiratory chain complex
III assembly" evidence=IEA] [GO:0033617 "mitochondrial respiratory
chain complex IV assembly" evidence=IEA] [GO:0032981 "mitochondrial
respiratory chain complex I assembly" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
eggNOG:COG0465 GO:GO:0017111 GO:GO:0032981 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
OMA:RDKSYQW EMBL:BT020945 EMBL:BC103135 IPI:IPI00713658
RefSeq:NP_001015671.1 UniGene:Bt.5278 ProteinModelPortal:Q5E9H5
STRING:Q5E9H5 Ensembl:ENSBTAT00000004967 GeneID:539713
KEGG:bta:539713 CTD:617 GeneTree:ENSGT00390000005415
HOGENOM:HOG000198799 HOVERGEN:HBG048759 InParanoid:Q5E9H5
OrthoDB:EOG4TTGJ0 NextBio:20878172 GO:GO:0034551 GO:GO:0033617
Uniprot:Q5E9H5
Length = 419
Score = 169 (64.5 bits), Expect = 1.1e-21, Sum P(3) = 1.1e-21
Identities = 42/103 (40%), Positives = 60/103 (58%)
Query: 343 KGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYCGPY 402
+G LT SGLLN +DG+ S+ + RI+ TTNH +RLDPAL+RPGR+DM ++ +C +
Sbjct: 302 QGLGRLTFSGLLNALDGVAST--EARIVFMTTNHIDRLDPALIRPGRVDMKEYVGHCSRW 359
Query: 403 GF-RLLAANYLGITDCEHKLVAEIETLLKTINITPAQVAEQFM 444
++ Y G + A+ L T I+PAQV FM
Sbjct: 360 QLTQMFQRFYPGQATSLAENFAD-RVLQATTQISPAQVQGYFM 401
Score = 157 (60.3 bits), Expect = 1.1e-21, Sum P(3) = 1.1e-21
Identities = 33/99 (33%), Positives = 58/99 (58%)
Query: 210 DTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLK 269
+++ +E + I+ D+ F+ ++Y G ++RGYLLYGPPG GKSS + A+A L+
Sbjct: 189 NSVVLEQGVTERIVRDIREFIDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITALAGELQ 248
Query: 270 FDVFDLQLGNVTRDSDLRTLLLSTG-NRSILVIEDIDCS 307
+ L L + + D LLS +S++++ED+D +
Sbjct: 249 HSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAA 287
Score = 40 (19.1 bits), Expect = 1.1e-21, Sum P(3) = 1.1e-21
Identities = 6/29 (20%), Positives = 17/29 (58%)
Query: 33 DFLPEPVRNYACFAFRYFFKPRSKELTLV 61
+F+P P ++ + ++ RS+E+ ++
Sbjct: 96 EFVPSPGNHFIWYQGKWIRVERSREMQMI 124
>UNIPROTKB|E2RE50 [details] [associations]
symbol:BCS1L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0034551 "mitochondrial respiratory chain
complex III assembly" evidence=IEA] [GO:0033617 "mitochondrial
respiratory chain complex IV assembly" evidence=IEA] [GO:0032981
"mitochondrial respiratory chain complex I assembly" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0017111
GO:GO:0032981 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 OMA:RDKSYQW CTD:617
GeneTree:ENSGT00390000005415 GO:GO:0034551 GO:GO:0033617
EMBL:AAEX03018156 RefSeq:XP_536070.1 Ensembl:ENSCAFT00000023625
GeneID:478911 KEGG:cfa:478911 NextBio:20854180 Uniprot:E2RE50
Length = 419
Score = 172 (65.6 bits), Expect = 1.6e-21, Sum P(3) = 1.6e-21
Identities = 43/103 (41%), Positives = 59/103 (57%)
Query: 343 KGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYCGPY 402
+G LT SGLLN +DG+ S+ + RI+ TTNH +RLDPAL+RPGR+DM ++ YC +
Sbjct: 302 QGLGRLTFSGLLNALDGVAST--EARIVFMTTNHVDRLDPALIRPGRVDMKEYVGYCSHW 359
Query: 403 GF-RLLAANYLGITDCEHKLVAEIETLLKTINITPAQVAEQFM 444
++ Y G + A L T I+PAQV FM
Sbjct: 360 QLTQMFQRFYPGQAPSLAEAFAG-RVLQVTTQISPAQVQGYFM 401
Score = 152 (58.6 bits), Expect = 1.6e-21, Sum P(3) = 1.6e-21
Identities = 32/87 (36%), Positives = 52/87 (59%)
Query: 222 IMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLGNVT 281
I+ D+ F+ ++Y G ++RGYLLYGPPG GKSS + A+A L+ + L L + +
Sbjct: 201 IVRDVREFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSS 260
Query: 282 RDSDLRTLLLSTG-NRSILVIEDIDCS 307
D LLS +S++++ED+D +
Sbjct: 261 LSDDRLNHLLSVAPQQSLVLLEDVDAA 287
Score = 40 (19.1 bits), Expect = 1.6e-21, Sum P(3) = 1.6e-21
Identities = 6/29 (20%), Positives = 17/29 (58%)
Query: 33 DFLPEPVRNYACFAFRYFFKPRSKELTLV 61
+F+P P ++ + ++ RS+E+ ++
Sbjct: 96 EFVPSPGNHFIWYQGKWIRVERSREMQMI 124
>FB|FBgn0032195 [details] [associations]
symbol:CG4908 species:7227 "Drosophila melanogaster"
[GO:0006461 "protein complex assembly" evidence=ISS] [GO:0005743
"mitochondrial inner membrane" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0034551 "mitochondrial respiratory chain complex III assembly"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 EMBL:AE014134 GO:GO:0006200
GO:GO:0016887 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 OMA:RDKSYQW GeneTree:ENSGT00390000005415
EMBL:AY089691 RefSeq:NP_609358.1 RefSeq:NP_723532.1 UniGene:Dm.383
SMR:Q9VL22 STRING:Q9VL22 EnsemblMetazoa:FBtr0079949
EnsemblMetazoa:FBtr0079950 GeneID:34360 KEGG:dme:Dmel_CG4908
UCSC:CG4908-RA FlyBase:FBgn0032195 InParanoid:Q9VL22
OrthoDB:EOG40CFZ9 GenomeRNAi:34360 NextBio:788111 Uniprot:Q9VL22
Length = 431
Score = 167 (63.8 bits), Expect = 3.9e-21, Sum P(2) = 3.9e-21
Identities = 40/107 (37%), Positives = 61/107 (57%)
Query: 344 GQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYCGPYG 403
G + +T SGLLN +DG+ S+ + RI+ TTN+ +RLDPAL+RPGR+D+ ++ YC Y
Sbjct: 304 GLNRITFSGLLNCLDGVGST--EARIVFMTTNYIDRLDPALVRPGRIDLKEYIGYCTQYQ 361
Query: 404 FRLLAANYLGITDCEHKLVAEIETLLKTIN-----ITPAQVAEQFMK 445
+ N+ +D + E K +N +PAQ+ FMK
Sbjct: 362 LEEMFKNFFASSD-----TTKAEEFGKRVNSFGRSASPAQIQGFFMK 403
Score = 156 (60.0 bits), Expect = 3.9e-21, Sum P(2) = 3.9e-21
Identities = 35/87 (40%), Positives = 51/87 (58%)
Query: 222 IMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLGNV- 280
I+ D F++ +Y + G ++RGYLLYGPPG GKSS + A+A L++ V L L
Sbjct: 202 IIADCQDFIKSSLWYTQRGIPYRRGYLLYGPPGCGKSSFITALAGELEYSVCLLNLSERG 261
Query: 281 TRDSDLRTLLLSTGNRSILVIEDIDCS 307
D L LL +SI+++EDID +
Sbjct: 262 LTDDRLNHLLNVAPEQSIILLEDIDAA 288
>UNIPROTKB|G4MN83 [details] [associations]
symbol:MGG_02058 "Mitochondrial chaperone BCS1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
EMBL:CM001231 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 RefSeq:XP_003708818.1
EnsemblFungi:MGG_02058T0 GeneID:2681213 KEGG:mgr:MGG_02058
Uniprot:G4MN83
Length = 566
Score = 272 (100.8 bits), Expect = 8.4e-21, P = 8.4e-21
Identities = 74/228 (32%), Positives = 117/228 (51%)
Query: 173 KDMKDKTRVLKMYTLHRVPDYDAIRWDSVKLEHPATFDTLAMEPDLKATIMEDLDRFVRR 232
KD DKT +++ +L + +D W V T+ ++ + K ++ D++ +++
Sbjct: 234 KDHGDKTLIMRPNSLPQRRFHDRA-WREVAKRPVRPISTVVLDQEQKTAVLSDMNEYLQP 292
Query: 233 KE--FYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLGNVT-RDSDLRTL 289
K +Y G +RGYL +GPPGTGK+SL A+A +++ + L D DL TL
Sbjct: 293 KTECWYSNRGIPLRRGYLFHGPPGTGKTSLSFALAGVFGLEIYVISLIEPQLSDEDLSTL 352
Query: 290 LLSTGNRSILVIEDIDCS-VDLPDRRNGNENNADAQS--KAAGAAVRKNKTDFAGGKGQH 346
R I+++EDID + + + E + S K A A R K G Q
Sbjct: 353 FNGLPRRCIVLLEDIDTAGMSRAEGEIRTETKTEGPSEWKVADLA-RALKVGRGHGDDQK 411
Query: 347 MLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
+++SGLLN IDG+ + G RI + TTN E LD AL+R GR+D+ +
Sbjct: 412 GISMSGLLNVIDGVAAHEG--RIFIMTTNKPEILDEALIRSGRVDLQV 457
>UNIPROTKB|F1P1Q6 [details] [associations]
symbol:BCS1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0034551 "mitochondrial respiratory chain complex III
assembly" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
GeneTree:ENSGT00390000005415 EMBL:AADN02016784 IPI:IPI00819859
PRIDE:F1P1Q6 Ensembl:ENSGALT00000038219 Uniprot:F1P1Q6
Length = 419
Score = 168 (64.2 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
Identities = 34/98 (34%), Positives = 58/98 (59%)
Query: 211 TLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKF 270
++ +E + ++ED+ F+ ++Y G ++RGYLLYGPPG GKSS + A+A L+
Sbjct: 190 SVVLEKGVSERLVEDVKEFIDNPKWYIERGIPYRRGYLLYGPPGCGKSSFITALAGELQH 249
Query: 271 DVFDLQLGNVTRDSDLRTLLLSTG-NRSILVIEDIDCS 307
+ L L + + D LLS +SI+++ED+D +
Sbjct: 250 SICLLSLSDRSLSDDRLNYLLSVAPQQSIILLEDVDAA 287
Score = 148 (57.2 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
Identities = 39/103 (37%), Positives = 58/103 (56%)
Query: 343 KGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYCGPY 402
+G LT SGLLN +DG+ S+ + RI+ TTN+ +RLDPAL+RPGR+D+ ++ +C
Sbjct: 302 QGMGRLTFSGLLNALDGVAST--EARIVFMTTNYVDRLDPALVRPGRVDLKQYVGHCSRG 359
Query: 403 GF-RLLAANYLGITDCEHKLVAEIETLLKTINITPAQVAEQFM 444
R+ Y + AE + L + I+ AQV FM
Sbjct: 360 QLARMFQRFYPEQPPAAAERFAE-QALAVSKQISAAQVQGHFM 401
>UNIPROTKB|G4MYI1 [details] [associations]
symbol:MGG_10383 "Mitochondrial chaperone BCS1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR027243 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:CM001232 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
RefSeq:XP_003713408.1 ProteinModelPortal:G4MYI1
EnsemblFungi:MGG_10383T0 GeneID:2681994 KEGG:mgr:MGG_10383
Uniprot:G4MYI1
Length = 494
Score = 173 (66.0 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
Identities = 48/161 (29%), Positives = 80/161 (49%)
Query: 153 HQT---HKDMVLNSYLPHVIELAKDMKDKTRVLKMYTLHRVPDYD--AIRWDSVKL-EHP 206
HQT H+ + L + H + + K + P Y+ + W + L
Sbjct: 175 HQTGEPHETVTLTTLWSHRHVFEHVFSEAHALAKSAQAGKTPVYNIQGMSWAQLGLPRRK 234
Query: 207 ATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
++ E LK I+ED+ F+ R ++Y G ++R YLL+GPPG+GKSS + A+A
Sbjct: 235 RPLASVVFEKGLKEAIVEDVQDFLSRHQWYADRGIPYRRTYLLHGPPGSGKSSFIHALAG 294
Query: 267 YLKFD--VFDLQLGNVTRDSDLRTLLLSTGNRSILVIEDID 305
L ++ + +L +T D L +L+ RSIL++ED+D
Sbjct: 295 ELDYNLAIVNLVERGLT-DDKLANMLMRLPPRSILLLEDVD 334
Score = 144 (55.7 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
Identities = 30/69 (43%), Positives = 44/69 (63%)
Query: 348 LTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYCGPYGFRLL 407
+T SGLLN +DG+ + G++RI TTN+ ERLDPAL+RPGR+D+ + + P L
Sbjct: 353 VTYSGLLNVLDGM--AAGEDRIAFLTTNYVERLDPALIRPGRVDVKVRVGEATPEQAAEL 410
Query: 408 AANYLGITD 416
+ + G D
Sbjct: 411 WSRFYGDVD 419
>ZFIN|ZDB-GENE-040426-938 [details] [associations]
symbol:bcs1l "BCS1-like (yeast)" species:7955
"Danio rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-040426-938
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 eggNOG:COG0465
GO:GO:0017111 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 OMA:RDKSYQW CTD:617
GeneTree:ENSGT00390000005415 HOGENOM:HOG000198799
HOVERGEN:HBG048759 OrthoDB:EOG4TTGJ0 EMBL:AY394959 EMBL:BC045990
IPI:IPI00495335 RefSeq:NP_957476.2 UniGene:Dr.80335
ProteinModelPortal:Q7ZV60 STRING:Q7ZV60 PRIDE:Q7ZV60
Ensembl:ENSDART00000022246 GeneID:394157 KEGG:dre:394157
InParanoid:Q7ZV60 NextBio:20815107 ArrayExpress:Q7ZV60 Bgee:Q7ZV60
Uniprot:Q7ZV60
Length = 420
Score = 163 (62.4 bits), Expect = 3.3e-20, Sum P(2) = 3.3e-20
Identities = 33/98 (33%), Positives = 58/98 (59%)
Query: 211 TLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKF 270
++ +E + I++D+ F+ ++Y G ++RGYLLYGPPG GKSS + A+A L +
Sbjct: 190 SVVLESGVAERIVDDVKEFIGNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELGY 249
Query: 271 DVFDLQLGNVTRDSDLRTLLLSTG-NRSILVIEDIDCS 307
+ + L + + D LLS +SI+++ED+D +
Sbjct: 250 SICLMSLSDRSLSDDRLNHLLSVAPQQSIILLEDVDAA 287
Score = 151 (58.2 bits), Expect = 3.3e-20, Sum P(2) = 3.3e-20
Identities = 39/103 (37%), Positives = 59/103 (57%)
Query: 343 KGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYCGPY 402
+G LT SGLLN +DG+ SS + RI+ TTN ERLDPAL+RPGR+D+ ++ +C +
Sbjct: 303 QGMGRLTFSGLLNALDGVASS--EARIVFMTTNFIERLDPALVRPGRVDLKQYVGHCSHW 360
Query: 403 GF-RLLAANYLGITDCEHKLVAEIETLLKTINITPAQVAEQFM 444
++ Y + E +E + L +++ AQV FM
Sbjct: 361 QLTQMFRRFYPQESAAEADHFSE-QALAAHTDLSAAQVQGHFM 402
>CGD|CAL0005742 [details] [associations]
symbol:orf19.458 species:5476 "Candida albicans" [GO:0008320
"protein transmembrane transporter activity" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0032979 "protein insertion into mitochondrial membrane from
inner side" evidence=IEA] [GO:0051131 "chaperone-mediated protein
complex assembly" evidence=IEA] [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 SMART:SM00382 CGD:CAL0005742 GO:GO:0005524
eggNOG:COG0465 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
HOGENOM:HOG000198799 EMBL:AACQ01000078 EMBL:AACQ01000077
RefSeq:XP_715892.1 RefSeq:XP_715943.1 ProteinModelPortal:Q5A283
STRING:Q5A283 GeneID:3642454 GeneID:3642502 KEGG:cal:CaO19.458
KEGG:cal:CaO19.8089 Uniprot:Q5A283
Length = 444
Score = 179 (68.1 bits), Expect = 3.7e-20, Sum P(2) = 3.7e-20
Identities = 37/106 (34%), Positives = 64/106 (60%)
Query: 211 TLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKF 270
++ ++ + I+ D+ F+ E+Y + G ++RGYLLYGPPG+GK+S + A+A L +
Sbjct: 214 SVILDEGIAENIVNDVKDFLTSGEWYHKRGIPYRRGYLLYGPPGSGKTSFIQALAGELDY 273
Query: 271 DVFDLQLG-NVTRDSDLRTLLLSTGNRSILVIEDIDCSVDLPDRRN 315
++ L L N D L L+ NRSIL++ED+D + + ++ N
Sbjct: 274 NICILNLSENNLTDDRLNHLMNHIPNRSILLLEDVDAAFNKREQTN 319
Score = 134 (52.2 bits), Expect = 3.7e-20, Sum P(2) = 3.7e-20
Identities = 30/61 (49%), Positives = 41/61 (67%)
Query: 335 NKTDFAGGKG-QHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMH 393
NK + +G + +T SGLLN +DG+ S+ +E I TTNH E+LDPALLRPGR+D
Sbjct: 313 NKREQTNDQGFNNGVTFSGLLNALDGVASA--EECITFMTTNHPEKLDPALLRPGRVDYK 370
Query: 394 I 394
+
Sbjct: 371 V 371
Score = 43 (20.2 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 47 FRYFFKPRSKELT-LVIEDSNGIARNQIFEAAEAYLSAK 84
+R F +PRSK L VI D GIA N + + + S +
Sbjct: 200 WRPFGQPRSKRLLGSVILDE-GIAENIVNDVKDFLTSGE 237
>WB|WBGene00010042 [details] [associations]
symbol:bcs-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0040010 "positive regulation of growth
rate" evidence=IMP] [GO:0009792 "embryo development ending in birth
or egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 eggNOG:COG0465 GO:GO:0017111 EMBL:Z49967
InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
OMA:RDKSYQW GeneTree:ENSGT00390000005415 HOGENOM:HOG000198799
PIR:T22632 RefSeq:NP_001022191.1 ProteinModelPortal:Q20755
SMR:Q20755 STRING:Q20755 PaxDb:Q20755 PRIDE:Q20755
EnsemblMetazoa:F54C9.6a.1 EnsemblMetazoa:F54C9.6a.2
EnsemblMetazoa:F54C9.6a.3 GeneID:174372 KEGG:cel:CELE_F54C9.6
UCSC:F54C9.6a.2 CTD:174372 WormBase:F54C9.6a InParanoid:Q20755
NextBio:883750 ArrayExpress:Q20755 Uniprot:Q20755
Length = 442
Score = 173 (66.0 bits), Expect = 4.1e-20, Sum P(2) = 4.1e-20
Identities = 35/87 (40%), Positives = 53/87 (60%)
Query: 222 IMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLGNVT 281
++ED F+ +Y G ++RGYL YGPPGTGKSS ++A+A++ + V L L T
Sbjct: 221 LVEDFQEFISSATWYADRGVPYRRGYLFYGPPGTGKSSFISALASHFGYSVCLLSLSERT 280
Query: 282 RDSDLRTLLLSTGN-RSILVIEDIDCS 307
D D LL+T S++++EDID +
Sbjct: 281 LDDDRLNHLLNTAPPNSVVILEDIDAA 307
Score = 140 (54.3 bits), Expect = 4.1e-20, Sum P(2) = 4.1e-20
Identities = 27/49 (55%), Positives = 37/49 (75%)
Query: 343 KGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMD 391
+G +T SGLLN +DG+ +C +ER+ TTN+ ERLDPAL+RPGR+D
Sbjct: 322 QGLSRVTFSGLLNALDGV--ACAEERLTFMTTNYVERLDPALIRPGRVD 368
>UNIPROTKB|E1BWG5 [details] [associations]
symbol:BCS1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0032981 "mitochondrial
respiratory chain complex I assembly" evidence=IEA] [GO:0033617
"mitochondrial respiratory chain complex IV assembly" evidence=IEA]
[GO:0034551 "mitochondrial respiratory chain complex III assembly"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0017111
GO:GO:0032981 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 OMA:RDKSYQW GeneTree:ENSGT00390000005415
GO:GO:0034551 GO:GO:0033617 EMBL:AADN02016784 IPI:IPI00579056
Ensembl:ENSGALT00000018571 Uniprot:E1BWG5
Length = 420
Score = 164 (62.8 bits), Expect = 5.2e-20, Sum P(2) = 5.2e-20
Identities = 35/99 (35%), Positives = 59/99 (59%)
Query: 211 TLAMEPDLKATIMEDLDRFVRRKEFYKRVGRA-WKRGYLLYGPPGTGKSSLVAAMANYLK 269
++ +E + ++ED+ F+ ++Y G+A +RGYLLYGPPG GKSS + A+A L+
Sbjct: 190 SVVLEKGVSERLVEDVKEFIDNPKWYIERGKAPVRRGYLLYGPPGCGKSSFITALAGELQ 249
Query: 270 FDVFDLQLGNVTRDSDLRTLLLSTG-NRSILVIEDIDCS 307
+ L L + + D LLS +SI+++ED+D +
Sbjct: 250 HSICLLSLSDRSLSDDRLNYLLSVAPQQSIILLEDVDAA 288
Score = 148 (57.2 bits), Expect = 5.2e-20, Sum P(2) = 5.2e-20
Identities = 39/103 (37%), Positives = 58/103 (56%)
Query: 343 KGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYCGPY 402
+G LT SGLLN +DG+ S+ + RI+ TTN+ +RLDPAL+RPGR+D+ ++ +C
Sbjct: 303 QGMGRLTFSGLLNALDGVAST--EARIVFMTTNYVDRLDPALVRPGRVDLKQYVGHCSRG 360
Query: 403 GF-RLLAANYLGITDCEHKLVAEIETLLKTINITPAQVAEQFM 444
R+ Y + AE + L + I+ AQV FM
Sbjct: 361 QLARMFQRFYPEQPPAAAERFAE-QALAVSKQISAAQVQGHFM 402
>TAIR|locus:2115914 [details] [associations]
symbol:AT4G05340 species:3702 "Arabidopsis thaliana"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004
PROSITE:PS00674 GO:GO:0005524 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016787 eggNOG:COG0465
EMBL:AL161503 HSSP:P28691 IPI:IPI00522068 PIR:B85067
RefSeq:NP_192443.1 UniGene:At.54163 ProteinModelPortal:Q9M0W1
SMR:Q9M0W1 EnsemblPlants:AT4G05340.1 GeneID:825882
KEGG:ath:AT4G05340 TAIR:At4g05340 InParanoid:Q9M0W1
PhylomeDB:Q9M0W1 ArrayExpress:Q9M0W1 Genevestigator:Q9M0W1
Uniprot:Q9M0W1
Length = 96
Score = 238 (88.8 bits), Expect = 2.3e-19, P = 2.3e-19
Identities = 45/72 (62%), Positives = 55/72 (76%)
Query: 343 KGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYCGPY 402
K ++LSGLL F+DGLWS+ +ERII+FTTNHKE+LDPA LRPG+MD+HI M YC P
Sbjct: 22 KNDPQVSLSGLLYFVDGLWSNSVEERIIIFTTNHKEKLDPAFLRPGKMDVHILMDYCTPV 81
Query: 403 GFRLLAANYLGI 414
F+ L A YL I
Sbjct: 82 VFKKLDALYLDI 93
>TAIR|locus:2095467 [details] [associations]
symbol:AT3G28560 "AT3G28560" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0048451 "petal formation" evidence=RCA]
[GO:0048453 "sepal formation" evidence=RCA] EMBL:CP002686
GenomeReviews:BA000014_GR eggNOG:COG0465 EMBL:AP000420
InterPro:IPR025753 Pfam:PF14363 EMBL:AY924779 EMBL:DQ132691
IPI:IPI00534445 RefSeq:NP_189497.1 UniGene:At.53542
UniGene:At.73270 EnsemblPlants:AT3G28560.1 GeneID:822486
KEGG:ath:AT3G28560 TAIR:At3g28560 PhylomeDB:Q9LJJ9
Genevestigator:Q9LJJ9 Uniprot:Q9LJJ9
Length = 257
Score = 219 (82.2 bits), Expect = 2.7e-17, P = 2.7e-17
Identities = 46/156 (29%), Positives = 85/156 (54%)
Query: 67 GIARNQIFEAAEAYLSAKIGPSIERLKICKTPNEKVITIRLEKNEQIIDSFRGVQLRWRF 126
G+ +++ F+ YLS K RLK ++ K + + L+ +E + D F+GV+++W
Sbjct: 56 GLEKSEAFDTIHNYLSTKSTALGNRLKANESKKSKSLVLSLDDHETVEDVFQGVKVKWSS 115
Query: 127 ALVEAADGKGNSHSMR-PEKRLFELTFHQTHKDMVLNSYLPHVIELAKDMKDKTRVLKMY 185
++ E + + E+R L+FH H++M+ +YL HV+ K++ K R K+Y
Sbjct: 116 SVRENQNQSSTNRDKGFAERRYLTLSFHSRHREMITTTYLDHVLREGKEIGLKKRERKLY 175
Query: 186 TLHRVPDYDAIR----WDSVKLEHPATFDTLAMEPD 217
T + ++ + R W +V +HPAT +T AM+P+
Sbjct: 176 TNNSSHEWISWRLGTNWSNVSFDHPATLETFAMDPE 211
>UNIPROTKB|G4NGV5 [details] [associations]
symbol:MGG_04018 "Mitochondrial chaperone BCS1, variant"
species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:CM001236 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
RefSeq:XP_003719831.1 EnsemblFungi:MGG_04018T1 GeneID:2677451
KEGG:mgr:MGG_04018 Uniprot:G4NGV5
Length = 610
Score = 150 (57.9 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 41/149 (27%), Positives = 71/149 (47%)
Query: 161 LNSYLPHVIE-LAKDMKDKTRVLKMYTLHRVPDYDAIRWDSVKLEHPATFDTLAMEPDLK 219
+ L H E KD KT ++K + + W SV +T+ ++ K
Sbjct: 234 IKELLAHAREHYYKDHYAKT-LIKRPNSSLIRRHGRHSWTSVANRPVRPMNTVVLDQKQK 292
Query: 220 ATIMEDLDRFVRRK--EFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQL 277
++ D++ +++ + +Y G +RGYL +GPPGTGK+SL A+A D++ + L
Sbjct: 293 TAVLSDMNEYLQPETPRWYANRGIPLRRGYLFHGPPGTGKTSLSFALAGVFGLDIYVVSL 352
Query: 278 GNVT-RDSDLRTLLLSTGNRSILVIEDID 305
+ DL L R ++++EDID
Sbjct: 353 LEPQLSEEDLSNLFNCLPRRCVVLLEDID 381
Score = 142 (55.0 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 45/133 (33%), Positives = 69/133 (51%)
Query: 283 DSDLRTLLLSTGNRSILVIEDIDCS-VDLPDRRNGNENNADAQ------SKAAGAAVRKN 335
+ DL L R ++++EDID + + + + G+ + + S A N
Sbjct: 359 EEDLSNLFNCLPRRCVVLLEDIDTAGLTRTEEKIGHSVRTNTKTTTTTGSNATSPPSGPN 418
Query: 336 K---TDFA----GGKG----QHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPAL 384
+ TD A GG+G Q ++LSGLLN IDG+ S G R+++ TTN E LD AL
Sbjct: 419 EWKVTDLARALKGGRGSDGEQKGISLSGLLNAIDGVASHEG--RVLIMTTNRPESLDDAL 476
Query: 385 LRPGRMDMHIHMS 397
+RPGR+D+ + S
Sbjct: 477 IRPGRVDLQVAFS 489
Score = 39 (18.8 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 36 PEPVRNYACFAFRYFFKPRSKELTLVIEDSNGIAR 70
PEP++ A +++K + TL+ ++ + R
Sbjct: 231 PEPIKELLAHAREHYYKDHYAK-TLIKRPNSSLIR 264
>UNIPROTKB|H7C492 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0034551
"mitochondrial respiratory chain complex III assembly"
evidence=IEA] InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 GO:GO:0005524
PANTHER:PTHR23070:SF2 HGNC:HGNC:1020 EMBL:AC009974 EMBL:AC079810
ProteinModelPortal:H7C492 Ensembl:ENST00000426649 Uniprot:H7C492
Length = 201
Score = 173 (66.0 bits), Expect = 5.6e-15, Sum P(2) = 5.6e-15
Identities = 43/103 (41%), Positives = 60/103 (58%)
Query: 343 KGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYCGPY 402
+G LT SGLLN +DG+ S+ + RI+ TTNH +RLDPAL+RPGR+D+ ++ YC +
Sbjct: 84 QGLGRLTFSGLLNALDGVAST--EARIVFMTTNHVDRLDPALIRPGRVDLKEYVGYCSHW 141
Query: 403 GF-RLLAANYLGITDCEHKLVAEIETLLKTINITPAQVAEQFM 444
++ Y G + AE L T I+PAQV FM
Sbjct: 142 QLTQMFQRFYPGQAPSLAENFAE-HVLRATNQISPAQVQGYFM 183
Score = 47 (21.6 bits), Expect = 5.6e-15, Sum P(2) = 5.6e-15
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 261 VAAMANYLKFDVFDLQLGNVTRDSDLRTLLLSTG-NRSILVIEDIDCS 307
V ++A L+ + L L + + D LLS +S++++ED+D +
Sbjct: 22 VLSLAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAA 69
>UNIPROTKB|H7BZF6 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9606
"Homo sapiens" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0034551 "mitochondrial respiratory chain complex
III assembly" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
PANTHER:PTHR23070:SF2 HGNC:HGNC:1020 EMBL:AC009974 EMBL:AC079810
ProteinModelPortal:H7BZF6 Ensembl:ENST00000436603 Uniprot:H7BZF6
Length = 121
Score = 131 (51.2 bits), Expect = 7.0e-14, Sum P(2) = 7.0e-14
Identities = 27/66 (40%), Positives = 42/66 (63%)
Query: 243 WKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLGNVTRDSDLRTLLLSTG-NRSILVI 301
++RGYLLYGPPG GKSS + A+A L+ + L L + + D LLS +S++++
Sbjct: 4 YRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLL 63
Query: 302 EDIDCS 307
ED+D +
Sbjct: 64 EDVDAA 69
Score = 80 (33.2 bits), Expect = 7.0e-14, Sum P(2) = 7.0e-14
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 343 KGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKER 379
+G LT SGLLN +DG+ S+ + RI+ TTNH +R
Sbjct: 84 QGLGRLTFSGLLNALDGVAST--EARIVFMTTNHVDR 118
>DICTYBASE|DDB_G0289135 [details] [associations]
symbol:bcs1lA "mitochondrial chaperone BCS1"
species:44689 "Dictyostelium discoideum" [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0051131 "chaperone-mediated protein complex
assembly" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IEA;ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0289135 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0005743 GenomeReviews:CM000154_GR GO:GO:0016887
eggNOG:COG0465 GO:GO:0051131 EMBL:AAFI02000130 RefSeq:XP_636375.1
EnsemblProtists:DDB0266725 GeneID:8626976 KEGG:ddi:DDB_G0289135
OMA:FITNESW InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 Uniprot:Q54HY8
Length = 421
Score = 198 (74.8 bits), Expect = 8.0e-13, P = 8.0e-13
Identities = 44/118 (37%), Positives = 68/118 (57%)
Query: 208 TFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANY 267
+ ++ + DLK+ ++ED+ F+ + +Y+ G ++RGYLLYG PG GKSSL+ A+A
Sbjct: 185 SLSSVILADDLKSKLIEDIKSFITNESWYRNRGIPYRRGYLLYGEPGNGKSSLINAIAGE 244
Query: 268 LKFDVFDLQLGNVT-RDSDLRTLLLSTGNRSILVIEDIDCSV----DLPDRRNGNENN 320
L D+ + L + D + LL + +SIL+IEDID + D D N N NN
Sbjct: 245 LNLDICIVSLSSKDIDDKQINHLLNNAPPKSILLIEDIDAAFKSHRDNVDSNNNNSNN 302
>TAIR|locus:2115944 [details] [associations]
symbol:AT4G05370 "AT4G05370" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161503
InterPro:IPR025753 Pfam:PF14363 EMBL:BT029322 IPI:IPI00544016
PIR:E85067 RefSeq:NP_192446.1 UniGene:At.51016 PRIDE:Q9M0V8
DNASU:825885 EnsemblPlants:AT4G05370.1 GeneID:825885
KEGG:ath:AT4G05370 TAIR:At4g05370 eggNOG:NOG243159
HOGENOM:HOG000153210 OMA:IIDEFEG PhylomeDB:Q9M0V8
ProtClustDB:CLSN2915942 ArrayExpress:Q9M0V8 Genevestigator:Q9M0V8
Uniprot:Q9M0V8
Length = 149
Score = 154 (59.3 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 43/146 (29%), Positives = 71/146 (48%)
Query: 7 IPSASTLFATYASMTASLMLFRSMANDFLPEPVRNYACFAFR-YFFKPRSKELTLVIEDS 65
IPS S +F+ Y S++A +LF+++ +F+P +R++ F YF + T +IE+
Sbjct: 9 IPSLSAIFSVYTSLSAFTILFKTILYEFIPVNIRDFIISKFTDYFSFYLNSNFTFIIEEQ 68
Query: 66 NGIARNQIFEAAEAYLSAKIGPSIERLKIC-----KTPNEKVITIRLEKNEQIIDSFRGV 120
+ NQ F AA+ YL + R + K P K + +IID F G+
Sbjct: 69 SDYVMNQTFRAAQVYLPTLLSRITTRSLLVSSSDLKNPMAKP-KFGIPVKAKIIDEFEGI 127
Query: 121 QLRWRFALVEAADGKGNSHSMRPEKR 146
+L W L+ A D N + + +KR
Sbjct: 128 RLEW--TLLSAKDND-NPYQSK-QKR 149
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 123 (48.4 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 37/106 (34%), Positives = 63/106 (59%)
Query: 169 IELAKDMKDKTRV-LK--MYTLHRV-PDYDAIRWDSVKLEH-P-ATFDTLA-MEPDLKAT 221
+++AK + TR LK YTLHR+ P+ +K+E P +T+D + ++ +K
Sbjct: 99 VDIAK-LTPSTRAALKHESYTLHRILPNKIDPLVSLMKVEKIPDSTYDMVGGLDKQIKE- 156
Query: 222 IMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANY 267
I E ++ ++ E ++ +G A +G LLYGPPGTGK+ L A+A++
Sbjct: 157 IKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHH 202
Score = 97 (39.2 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 25/70 (35%), Positives = 37/70 (52%)
Query: 334 KNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMH 393
+ ++ GG + T+ LLN +DG S+ + ++ TN + LDPALLRPGR+D
Sbjct: 254 RGESGSGGGDSEVQRTMLELLNQLDGFESTKNIK--VLMCTNRIDILDPALLRPGRIDRK 311
Query: 394 IHMSYCGPYG 403
I G G
Sbjct: 312 IEFPNPGDAG 321
Score = 45 (20.9 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 22/75 (29%), Positives = 25/75 (33%)
Query: 403 GFRLLAANYLGITDCEHKLVAEIETLLKTINITPAQVAEQF-MKSEDADVXXXXXXXXXX 461
G LLA TDC V+ E + K I V E F M E A
Sbjct: 191 GKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSI 250
Query: 462 XXXRNGSGDVDGDED 476
R SG GD +
Sbjct: 251 GSSRGESGSGGGDSE 265
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 114 (45.2 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 35/102 (34%), Positives = 58/102 (56%)
Query: 173 KDMKDKTRV-LKM--YTLHRVPDYDAIRWDSVKLEH--P-ATFDTLA-MEPDLKATIMED 225
KD+K RV L+ Y LH+V + A S+ + P +T+D + + +K I E
Sbjct: 105 KDLKASQRVCLRSDSYMLHKVLENKADPLVSLMMVEKVPDSTYDMVGGLTKQIKE-IKEV 163
Query: 226 LDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANY 267
++ V+ E ++ +G A +G +LYGPPGTGK+ L A+A++
Sbjct: 164 IELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHH 205
Score = 98 (39.6 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 24/54 (44%), Positives = 32/54 (59%)
Query: 341 GGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
GG + T+ LLN +DG +S + I+ TN + LDPALLRPGR+D I
Sbjct: 263 GGDSEVQRTMLELLNQLDGFETSKNIK--IIMATNRLDILDPALLRPGRIDRKI 314
>TIGR_CMR|GSU_1180 [details] [associations]
symbol:GSU_1180 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952233.1 ProteinModelPortal:Q74DY5 SMR:Q74DY5
GeneID:2686793 KEGG:gsu:GSU1180 PATRIC:22025134 OMA:VCQWGMS
ProtClustDB:CLSK828230 BioCyc:GSUL243231:GH27-1166-MONOMER
Uniprot:Q74DY5
Length = 617
Score = 117 (46.2 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 28/65 (43%), Positives = 36/65 (55%)
Query: 330 AAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGR 389
A R GG + TL+ LL+ +DG S DE I++ TN + LDPALLRPGR
Sbjct: 278 AVGRSRGAGLGGGHDEREQTLNQLLSEMDGFDSH--DEVIVMAATNRPDVLDPALLRPGR 335
Query: 390 MDMHI 394
D H+
Sbjct: 336 FDRHV 340
Score = 99 (39.9 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 208 TFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMA 265
TFD +A + K + E +D ++R + ++R+G +G LL GPPGTGK+ L A+A
Sbjct: 173 TFDDVAGMENPKMELKEIVD-YLRDPKKFQRIGGKVPKGVLLVGPPGTGKTLLARAVA 229
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 112 (44.5 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 340 AGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
+GG+ + T+ LLN +DG + S GD ++I+ TN E LDPAL+RPGR+D I
Sbjct: 226 SGGEREIQRTMLELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRIDRKI 278
Score = 97 (39.2 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 222 IMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
I E ++ + E+Y+ +G +G +LYGPPGTGK+ L A+AN
Sbjct: 124 IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 168
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 112 (44.5 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 340 AGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
+GG+ + T+ LLN +DG + S GD ++I+ TN E LDPAL+RPGR+D I
Sbjct: 297 SGGEREIQRTMLELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRIDRKI 349
Score = 97 (39.2 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 222 IMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
I E ++ + E+Y+ +G +G +LYGPPGTGK+ L A+AN
Sbjct: 195 IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 239
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 112 (44.5 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 340 AGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
+GG+ + T+ LLN +DG + S GD ++I+ TN E LDPAL+RPGR+D I
Sbjct: 298 SGGEREIQRTMLELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRIDRKI 350
Score = 97 (39.2 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 222 IMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
I E ++ + E+Y+ +G +G +LYGPPGTGK+ L A+AN
Sbjct: 196 IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 240
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 112 (44.5 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 340 AGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
+GG+ + T+ LLN +DG + S GD ++I+ TN E LDPAL+RPGR+D I
Sbjct: 298 SGGEREIQRTMLELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRIDRKI 350
Score = 97 (39.2 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 222 IMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
I E ++ + E+Y+ +G +G +LYGPPGTGK+ L A+AN
Sbjct: 196 IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 240
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 112 (44.5 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 340 AGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
+GG+ + T+ LLN +DG + S GD ++I+ TN E LDPAL+RPGR+D I
Sbjct: 299 SGGEREIQRTMLELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRIDRKI 351
Score = 97 (39.2 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 222 IMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
I E ++ + E+Y+ +G +G +LYGPPGTGK+ L A+AN
Sbjct: 197 IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 241
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 112 (44.5 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 340 AGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
+GG+ + T+ LLN +DG + S GD ++I+ TN E LDPAL+RPGR+D I
Sbjct: 299 SGGEREIQRTMLELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRIDRKI 351
Score = 97 (39.2 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 222 IMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
I E ++ + E+Y+ +G +G +LYGPPGTGK+ L A+AN
Sbjct: 197 IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 241
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 112 (44.5 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 340 AGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
+GG+ + T+ LLN +DG + S GD ++I+ TN E LDPAL+RPGR+D I
Sbjct: 299 SGGEREIQRTMLELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRIDRKI 351
Score = 97 (39.2 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 222 IMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
I E ++ + E+Y+ +G +G +LYGPPGTGK+ L A+AN
Sbjct: 197 IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 241
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 112 (44.5 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 340 AGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
+GG+ + T+ LLN +DG + S GD ++I+ TN E LDPAL+RPGR+D I
Sbjct: 299 SGGEREIQRTMLELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRIDRKI 351
Score = 97 (39.2 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 222 IMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
I E ++ + E+Y+ +G +G +LYGPPGTGK+ L A+AN
Sbjct: 197 IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 241
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 112 (44.5 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 340 AGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
+GG+ + T+ LLN +DG + S GD ++I+ TN E LDPAL+RPGR+D I
Sbjct: 299 SGGEREIQRTMLELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRIDRKI 351
Score = 97 (39.2 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 222 IMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
I E ++ + E+Y+ +G +G +LYGPPGTGK+ L A+AN
Sbjct: 197 IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 241
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 112 (44.5 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 340 AGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
+GG+ + T+ LLN +DG + S GD ++I+ TN E LDPAL+RPGR+D I
Sbjct: 299 SGGEREIQRTMLELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRIDRKI 351
Score = 97 (39.2 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 222 IMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
I E ++ + E+Y+ +G +G +LYGPPGTGK+ L A+AN
Sbjct: 197 IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 241
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 112 (44.5 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 340 AGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
+GG+ + T+ LLN +DG + S GD ++I+ TN E LDPAL+RPGR+D I
Sbjct: 299 SGGEREIQRTMLELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRIDRKI 351
Score = 97 (39.2 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 222 IMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
I E ++ + E+Y+ +G +G +LYGPPGTGK+ L A+AN
Sbjct: 197 IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 241
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 105 (42.0 bits), Expect = 9.0e-09, Sum P(2) = 9.0e-09
Identities = 27/55 (49%), Positives = 35/55 (63%)
Query: 340 AGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
+GG + T+ LLN +DG SS D +II+ TN + LDPALLRPGR+D I
Sbjct: 258 SGGDSEVQRTMLELLNQLDGFESS-KDIKIIM-ATNRLDILDPALLRPGRIDRKI 310
Score = 103 (41.3 bits), Expect = 9.0e-09, Sum P(2) = 9.0e-09
Identities = 22/62 (35%), Positives = 40/62 (64%)
Query: 207 ATFDTLA-MEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMA 265
+T+D + ++ +K I E ++ V+ E ++ +G A +G +LYGPPGTGK+ L A+A
Sbjct: 141 STYDMVGGLDKQIKE-IKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVA 199
Query: 266 NY 267
++
Sbjct: 200 HH 201
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 111 (44.1 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 25/57 (43%), Positives = 38/57 (66%)
Query: 340 AGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHM 396
+GG+ + T+ LLN +DG + S GD ++I+ TN + LDPAL+RPGR+D I +
Sbjct: 307 SGGEREIQRTMLELLNQLDG-FDSRGDVKVIM-ATNRIDSLDPALIRPGRIDRKIQL 361
Score = 96 (38.9 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 29/93 (31%), Positives = 47/93 (50%)
Query: 175 MKDKTRVLKMYTLHRV-PDYDAIRWDSVKLEHPATFDTLAMEPDLKATIMEDLDRFVRRK 233
+ +KT + L V P ++ + LE A D +E ++ I E ++ +
Sbjct: 160 LNNKTNSVVGILLDEVDPLVSVMKVEKAPLESYA--DIGGLESQIQE-IKEAVELPLTHP 216
Query: 234 EFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
E Y+ +G +G +LYGPPGTGK+ L A+AN
Sbjct: 217 ELYEDIGIKPPKGVILYGPPGTGKTLLAKAVAN 249
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 111 (44.1 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 25/57 (43%), Positives = 38/57 (66%)
Query: 340 AGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHM 396
+GG+ + T+ LLN +DG + S GD ++I+ TN + LDPAL+RPGR+D I +
Sbjct: 307 SGGEREIQRTMLELLNQLDG-FDSRGDVKVIM-ATNRIDSLDPALIRPGRIDRKIQL 361
Score = 96 (38.9 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 29/93 (31%), Positives = 47/93 (50%)
Query: 175 MKDKTRVLKMYTLHRV-PDYDAIRWDSVKLEHPATFDTLAMEPDLKATIMEDLDRFVRRK 233
+ +KT + L V P ++ + LE A D +E ++ I E ++ +
Sbjct: 160 LNNKTNSVVGILLDEVDPLVSVMKVEKAPLESYA--DIGGLESQIQE-IKEAVELPLTHP 216
Query: 234 EFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
E Y+ +G +G +LYGPPGTGK+ L A+AN
Sbjct: 217 ELYEDIGIKPPKGVILYGPPGTGKTLLAKAVAN 249
>UNIPROTKB|Q5LNU8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 107 (42.7 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 27/65 (41%), Positives = 37/65 (56%)
Query: 330 AAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGR 389
A R + GG + TL+ LL +DG ++ G II+ TN K+ LDPALLRPGR
Sbjct: 259 AVGRHRGAGYGGGNDEREQTLNQLLVEMDGFEANEGV--IILAATNRKDVLDPALLRPGR 316
Query: 390 MDMHI 394
D ++
Sbjct: 317 FDRNV 321
Score = 101 (40.6 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 208 TFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMA 265
TFD +A + K + E++ F+R + + R+G +G LL GPPGTGK+ L A+A
Sbjct: 154 TFDDVAGIDEAKEEL-EEIVEFLRNPQKFSRLGGKIPKGALLVGPPGTGKTLLARAIA 210
>TIGR_CMR|SPO_3105 [details] [associations]
symbol:SPO_3105 "ATP-dependent metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 107 (42.7 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 27/65 (41%), Positives = 37/65 (56%)
Query: 330 AAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGR 389
A R + GG + TL+ LL +DG ++ G II+ TN K+ LDPALLRPGR
Sbjct: 259 AVGRHRGAGYGGGNDEREQTLNQLLVEMDGFEANEGV--IILAATNRKDVLDPALLRPGR 316
Query: 390 MDMHI 394
D ++
Sbjct: 317 FDRNV 321
Score = 101 (40.6 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 208 TFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMA 265
TFD +A + K + E++ F+R + + R+G +G LL GPPGTGK+ L A+A
Sbjct: 154 TFDDVAGIDEAKEEL-EEIVEFLRNPQKFSRLGGKIPKGALLVGPPGTGKTLLARAIA 210
>WB|WBGene00015688 [details] [associations]
symbol:C10G11.8 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 HSSP:Q9LCZ4 EMBL:FO080499 PIR:D87802
RefSeq:NP_491811.1 ProteinModelPortal:P91025 SMR:P91025
STRING:P91025 PaxDb:P91025 EnsemblMetazoa:C10G11.8 GeneID:172324
KEGG:cel:CELE_C10G11.8 UCSC:C10G11.8 CTD:172324 WormBase:C10G11.8
InParanoid:P91025 OMA:RGIENAN NextBio:875027 Uniprot:P91025
Length = 438
Score = 108 (43.1 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 29/67 (43%), Positives = 41/67 (61%)
Query: 331 AVRKNKTDFAG-GKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGR 389
AV + D + G+ + TL LLN +DG + S GD +II+ TN + LDPAL+RPGR
Sbjct: 287 AVGTKRFDTSSRGEQEVQRTLLELLNQLDG-FESRGDVKIIM-ATNRIDSLDPALIRPGR 344
Query: 390 MDMHIHM 396
+D I +
Sbjct: 345 IDRKIEL 351
Score = 94 (38.1 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 208 TFDTLA-MEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
TFD + E ++ + E ++ + E+Y+ +G +G +LYG PGTGK+ L A+AN
Sbjct: 181 TFDDIGGCESQIQE-LKESVELPLTHPEYYEEMGITAPKGVILYGEPGTGKTLLAKAVAN 239
>TAIR|locus:2052806 [details] [associations]
symbol:VAR2 "VARIEGATED 2" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0008237 "metallopeptidase activity"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010027
"thylakoid membrane organization" evidence=RCA;IMP] [GO:0009507
"chloroplast" evidence=IDA] [GO:0010205 "photoinhibition"
evidence=IMP] [GO:0031977 "thylakoid lumen" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA;TAS]
[GO:0016020 "membrane" evidence=IDA] [GO:0030163 "protein catabolic
process" evidence=IDA] [GO:0072593 "reactive oxygen species
metabolic process" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009902 "chloroplast relocation" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0034660 "ncRNA
metabolic process" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=RCA] [GO:0042793 "transcription from
plastid promoter" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0010206
"photosystem II repair" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0008237 GO:GO:0004222 EMBL:AC004669
GO:GO:0010027 GO:GO:0072593 GO:GO:0010205 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0031977
GO:GO:0004176 GO:GO:0010206 HOGENOM:HOG000217276 KO:K03798
GO:GO:0010304 EMBL:AF135189 EMBL:AY045599 EMBL:AY093791
EMBL:AK221155 IPI:IPI00546467 PIR:F84714 RefSeq:NP_850156.1
UniGene:At.22024 UniGene:At.71129 UniGene:At.75189
ProteinModelPortal:O80860 SMR:O80860 IntAct:O80860 STRING:O80860
MEROPS:M41.005 World-2DPAGE:0003:O80860 PaxDb:O80860 PRIDE:O80860
ProMEX:O80860 EnsemblPlants:AT2G30950.1 GeneID:817646
KEGG:ath:AT2G30950 GeneFarm:2504 TAIR:At2g30950 InParanoid:O80860
OMA:LEIIAMR PhylomeDB:O80860 ProtClustDB:CLSN2679937
Genevestigator:O80860 Uniprot:O80860
Length = 695
Score = 104 (41.7 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 24/58 (41%), Positives = 35/58 (60%)
Query: 208 TFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMA 265
TFD +A + K ME ++ F+++ E + VG +G LL GPPGTGK+ L A+A
Sbjct: 225 TFDDVAGVDEAKQDFMEVVE-FLKKPERFTAVGAKIPKGVLLIGPPGTGKTLLAKAIA 281
Score = 103 (41.3 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 26/65 (40%), Positives = 34/65 (52%)
Query: 330 AAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGR 389
A R+ T GG + TL+ LL +DG + G I+V TN + LD ALLRPGR
Sbjct: 330 AVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGV--IVVAATNRADILDSALLRPGR 387
Query: 390 MDMHI 394
D +
Sbjct: 388 FDRQV 392
>TAIR|locus:2119926 [details] [associations]
symbol:RPT2a "regulatory particle AAA-ATPase 2A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0010078 "maintenance of root
meristem identity" evidence=IMP] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0035266 "meristem growth"
evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
[GO:0048827 "phyllome development" evidence=IMP] [GO:0048829 "root
cap development" evidence=IMP] [GO:0046686 "response to cadmium
ion" evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA;IMP] [GO:0043248 "proteasome assembly"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0051788 "response to misfolded protein" evidence=RCA;IMP]
[GO:0080129 "proteasome core complex assembly" evidence=RCA;IMP]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0007292 "female gamete generation"
evidence=IGI] [GO:0048232 "male gamete generation" evidence=IGI]
[GO:0090351 "seedling development" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0060968 "regulation
of gene silencing" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046686 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043161 GO:GO:0016020 EMBL:AL078470
EMBL:AL161574 GO:GO:0009408 GO:GO:0010311 GO:GO:0048829
GO:GO:0000502 GO:GO:0043248 GO:GO:0017111 GO:GO:0009965
GO:GO:0009933 EMBL:AL078469 GO:GO:0007292 GO:GO:0060968
GO:GO:0010078 HSSP:P43773 GO:GO:0051788 GO:GO:0090351 GO:GO:0048232
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123391 EMBL:AB161192 EMBL:AY034975 IPI:IPI00538666
PIR:T08959 RefSeq:NP_194633.1 UniGene:At.24596
ProteinModelPortal:Q9SZD4 SMR:Q9SZD4 IntAct:Q9SZD4 STRING:Q9SZD4
PaxDb:Q9SZD4 PRIDE:Q9SZD4 EnsemblPlants:AT4G29040.1 GeneID:829025
KEGG:ath:AT4G29040 GeneFarm:1494 TAIR:At4g29040 InParanoid:Q9SZD4
KO:K03062 OMA:SAIVMEA PhylomeDB:Q9SZD4 ProtClustDB:CLSN2683303
GO:GO:0035266 Uniprot:Q9SZD4
Length = 443
Score = 115 (45.5 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 30/65 (46%), Positives = 41/65 (63%)
Query: 331 AVRKNKTD-FAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGR 389
AV + D +GG+ + T+ LLN +DG + S GD ++I+ TN E LDPALLRPGR
Sbjct: 292 AVGTKRYDAHSGGEREIQRTMLELLNQLDG-FDSRGDVKVIL-ATNRIESLDPALLRPGR 349
Query: 390 MDMHI 394
+D I
Sbjct: 350 IDRKI 354
Score = 86 (35.3 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 24/76 (31%), Positives = 39/76 (51%)
Query: 191 PDYDAIRWDSVKLEHPATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLY 250
P ++ + LE A D +E ++ I E ++ + E Y+ +G +G +LY
Sbjct: 172 PMVSVMKVEKAPLESYA--DIGGLEAQIQE-IKEAVELPLTHPELYEDIGIKPPKGVILY 228
Query: 251 GPPGTGKSSLVAAMAN 266
G PGTGK+ L A+AN
Sbjct: 229 GEPGTGKTLLAKAVAN 244
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 112 (44.5 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 340 AGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
+GG+ + T+ LLN +DG + S GD ++I+ TN E LDPAL+RPGR+D I
Sbjct: 299 SGGEREIQRTMLELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRIDRKI 351
Score = 89 (36.4 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 222 IMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
I E ++ + E+Y+ +G +G +LYG PGTGK+ L A+AN
Sbjct: 197 IKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVAN 241
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 112 (44.5 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 340 AGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
+GG+ + T+ LLN +DG + S GD ++I+ TN E LDPAL+RPGR+D I
Sbjct: 299 SGGEREIQRTMLELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRIDRKI 351
Score = 89 (36.4 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 222 IMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
I E ++ + E+Y+ +G +G +LYG PGTGK+ L A+AN
Sbjct: 197 IKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVAN 241
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 104 (41.7 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 22/62 (35%), Positives = 40/62 (64%)
Query: 207 ATFDTLA-MEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMA 265
+T+D + ++ +K I E ++ ++ E ++ +G A +G LLYGPPGTGK+ L A+A
Sbjct: 129 STYDMIGGLDQQIKE-IKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 187
Query: 266 NY 267
++
Sbjct: 188 HH 189
Score = 96 (38.9 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 25/65 (38%), Positives = 37/65 (56%)
Query: 331 AVRKNKTDFAG-GKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGR 389
++ ++ D AG G + T+ LLN +DG + + I+ TN + LDPALLRPGR
Sbjct: 236 SIGSSRIDSAGSGDSEVQRTMLELLNQLDGFEPTKNIK--IIMATNRLDILDPALLRPGR 293
Query: 390 MDMHI 394
+D I
Sbjct: 294 IDRKI 298
>UNIPROTKB|G4MMM3 [details] [associations]
symbol:MGG_16395 "ATP-dependent Zn protease" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524
GO:GO:0006508 GO:GO:0008233 EMBL:CM001231 RefSeq:XP_003710407.1
ProteinModelPortal:G4MMM3 EnsemblFungi:MGG_16395T0 GeneID:12986318
KEGG:mgr:MGG_16395 Uniprot:G4MMM3
Length = 477
Score = 125 (49.1 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 33/112 (29%), Positives = 61/112 (54%)
Query: 207 ATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
A++D + ++P +K +++D F + + Y+++ WKRG + YGPPG GK+ + A N
Sbjct: 190 ASWDNVILDPSMKQALIDDHMSFFKSRGQYEKLKVPWKRGIIYYGPPGNGKTVSIKATMN 249
Query: 267 --Y-LKFDVFDLQLGNVTR--DSDLRTLLLSTGNRSI----LVIEDIDCSVD 309
Y LK V L + ++ + ++ +G R++ LV ED+D V+
Sbjct: 250 MLYKLKDPVPTLYVRSLVSWMGPEAALSMIFSGARAMAPCYLVFEDLDSIVN 301
Score = 76 (31.8 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 351 SGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALL-RPGRMD 391
S LN +DGL ++ D ++ +TNH ERLDP + RP R D
Sbjct: 306 SYFLNEVDGLKNN--DGIFMIGSTNHLERLDPGISKRPSRFD 345
>TIGR_CMR|NSE_0423 [details] [associations]
symbol:NSE_0423 "ATP-dependent metalloprotease FtsH"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 EMBL:CP000237 GenomeReviews:CP000237_GR
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001 RefSeq:YP_506309.1
ProteinModelPortal:Q2GDY7 SMR:Q2GDY7 STRING:Q2GDY7 GeneID:3931660
KEGG:nse:NSE_0423 PATRIC:22680905 OMA:ENIESLH
ProtClustDB:CLSK749654 BioCyc:NSEN222891:GHFU-445-MONOMER
Uniprot:Q2GDY7
Length = 636
Score = 109 (43.4 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 29/68 (42%), Positives = 37/68 (54%)
Query: 330 AAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGR 389
A R F GG + TL+ LL +DG ++ G II+ TN + LDPALLRPGR
Sbjct: 260 AVGRHRGVGFGGGNDEREQTLNQLLVEMDGFEANEGV--IIIAATNRPDVLDPALLRPGR 317
Query: 390 MDMHIHMS 397
D I +S
Sbjct: 318 FDRQITIS 325
Score = 96 (38.9 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 23/68 (33%), Positives = 38/68 (55%)
Query: 208 TFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANY 267
TF +A + K + E ++ F+R + ++++G +G LL GPPGTGK+ L A+A
Sbjct: 155 TFHDVAGIDEAKEELAEIVE-FLREPKKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIAGE 213
Query: 268 LKFDVFDL 275
K F +
Sbjct: 214 AKVPFFSI 221
>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 100 (40.3 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 20/31 (64%), Positives = 23/31 (74%)
Query: 236 YKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
YKRVG +G LLYGPPGTGK+ L AMA+
Sbjct: 163 YKRVGIKTPKGVLLYGPPGTGKTLLARAMAS 193
Score = 100 (40.3 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 349 TLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHM 396
TL LLN +DG + G+ +II+ TN + LDPAL+RPGR+D I +
Sbjct: 260 TLMELLNHLDG-FEELGNVKIIM-ATNRPDVLDPALVRPGRLDRKIEI 305
>UNIPROTKB|Q8IEQ1 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
OMA:EHKEVES ProtClustDB:CLSZ2429012 GO:GO:0005838
RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1 PRIDE:Q8IEQ1
EnsemblProtists:PF13_0033:mRNA GeneID:814012 KEGG:pfa:PF13_0033
EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 100 (40.3 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 20/31 (64%), Positives = 23/31 (74%)
Query: 236 YKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
YKRVG +G LLYGPPGTGK+ L AMA+
Sbjct: 163 YKRVGIKTPKGVLLYGPPGTGKTLLARAMAS 193
Score = 100 (40.3 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 349 TLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHM 396
TL LLN +DG + G+ +II+ TN + LDPAL+RPGR+D I +
Sbjct: 260 TLMELLNHLDG-FEELGNVKIIM-ATNRPDVLDPALVRPGRLDRKIEI 305
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 104 (41.7 bits), Expect = 6.4e-08, Sum P(2) = 6.4e-08
Identities = 24/48 (50%), Positives = 32/48 (66%)
Query: 349 TLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHM 396
TL LLN +DG + S G ++I+ TN + LDPALLRPGR+D I +
Sbjct: 273 TLMELLNQLDG-FDSLGKVKVIM-ATNRPDTLDPALLRPGRLDRKIEI 318
Score = 96 (38.9 bits), Expect = 6.4e-08, Sum P(2) = 6.4e-08
Identities = 33/104 (31%), Positives = 55/104 (52%)
Query: 173 KDMKDKTRV-LKMYTL---HRVP-DYDAIRWDSVKLEHPATF---DTLAMEPDLKATIME 224
+++K TRV L M TL ++P + D + + + E P D + ++ + E
Sbjct: 107 EELKQGTRVSLDMTTLTIMRQLPREVDPLVY-KMSHEDPGNISYSDVGGLAEQIRE-LRE 164
Query: 225 DLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYL 268
++ + E +KRVG +G LL+GPPGTGK+ L A+A+ L
Sbjct: 165 VVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQL 208
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 104 (41.7 bits), Expect = 6.4e-08, Sum P(2) = 6.4e-08
Identities = 24/48 (50%), Positives = 32/48 (66%)
Query: 349 TLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHM 396
TL LLN +DG + S G ++I+ TN + LDPALLRPGR+D I +
Sbjct: 273 TLMELLNQLDG-FDSLGKVKVIM-ATNRPDTLDPALLRPGRLDRKIEI 318
Score = 96 (38.9 bits), Expect = 6.4e-08, Sum P(2) = 6.4e-08
Identities = 33/104 (31%), Positives = 55/104 (52%)
Query: 173 KDMKDKTRV-LKMYTL---HRVP-DYDAIRWDSVKLEHPATF---DTLAMEPDLKATIME 224
+++K TRV L M TL ++P + D + + + E P D + ++ + E
Sbjct: 107 EELKQGTRVSLDMTTLTIMRQLPREVDPLVY-KMSHEDPGNISYSDVGGLAEQIRE-LRE 164
Query: 225 DLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYL 268
++ + E +KRVG +G LL+GPPGTGK+ L A+A+ L
Sbjct: 165 VVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQL 208
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 101 (40.6 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 24/66 (36%), Positives = 40/66 (60%)
Query: 331 AVRKNKTDFAGGKGQHML--TLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPG 388
++ +++D +GG G + T+ LLN +DG ++ + ++ TN + LDPALLRPG
Sbjct: 249 SIGSSRSDSSGGSGDSEVQRTMLELLNQLDGFEATKNIK--VIMATNRIDILDPALLRPG 306
Query: 389 RMDMHI 394
R+D I
Sbjct: 307 RIDRKI 312
Score = 99 (39.9 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 22/62 (35%), Positives = 39/62 (62%)
Query: 207 ATFDTLA-MEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMA 265
+T++ + +E +K I E ++ V+ E ++ +G +G LLYGPPGTGK+ L A+A
Sbjct: 142 STYEMVGGLEKQIKE-IKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVA 200
Query: 266 NY 267
++
Sbjct: 201 HH 202
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 114 (45.2 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 27/55 (49%), Positives = 37/55 (67%)
Query: 340 AGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
+GG+ + T+ LLN +DG + S GD ++I+ TN E LDPALLRPGR+D I
Sbjct: 302 SGGEREIQRTMLELLNQLDG-FDSRGDVKVIL-ATNRIESLDPALLRPGRIDRKI 354
Score = 86 (35.3 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 24/76 (31%), Positives = 39/76 (51%)
Query: 191 PDYDAIRWDSVKLEHPATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLY 250
P ++ + LE A D +E ++ I E ++ + E Y+ +G +G +LY
Sbjct: 172 PMVSVMKVEKAPLESYA--DIGGLEAQIQE-IKEAVELPLTHPELYEDIGIKPPKGVILY 228
Query: 251 GPPGTGKSSLVAAMAN 266
G PGTGK+ L A+AN
Sbjct: 229 GEPGTGKTLLAKAVAN 244
>UNIPROTKB|C9J1S9 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0034551
"mitochondrial respiratory chain complex III assembly"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR003959 InterPro:IPR027243 Pfam:PF00004 GO:GO:0005739
GO:GO:0005524 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 HGNC:HGNC:1020 EMBL:AC009974 EMBL:AC079810
IPI:IPI00927724 ProteinModelPortal:C9J1S9 SMR:C9J1S9 STRING:C9J1S9
Ensembl:ENST00000443791 ArrayExpress:C9J1S9 Bgee:C9J1S9
Uniprot:C9J1S9
Length = 150
Score = 132 (51.5 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 29/82 (35%), Positives = 47/82 (57%)
Query: 210 DTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLK 269
+++ ++ L I+ D+ F+ ++Y G ++RGYLLYGPPG GKSS + A+A L+
Sbjct: 69 NSVVLQQGLADRIVRDVQEFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELE 128
Query: 270 FDVFDLQLGNVTRDSD-LRTLL 290
+ L L + + D L LL
Sbjct: 129 HSICLLSLTDSSLSDDRLNHLL 150
>WB|WBGene00021425 [details] [associations]
symbol:ppgn-1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
KO:K09552 EMBL:FO080872 EMBL:AB257343 RefSeq:NP_500191.3
UniGene:Cel.12073 ProteinModelPortal:G5EDB6 SMR:G5EDB6
MEROPS:M41.A12 EnsemblMetazoa:Y38F2AR.7.1
EnsemblMetazoa:Y38F2AR.7.2 GeneID:177021 KEGG:cel:CELE_Y38F2AR.7
CTD:177021 WormBase:Y38F2AR.7 OMA:DKISWSE NextBio:895012
Uniprot:G5EDB6
Length = 747
Score = 157 (60.3 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 62/193 (32%), Positives = 95/193 (49%)
Query: 209 FDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMA--N 266
F +A + K I E +D +++ + ++G RG LL GPPG GK+ L A+A +
Sbjct: 284 FKDVAGCSEAKVEIREFVD-YLKNPGRFTKLGAKLPRGALLTGPPGCGKTLLAKALAAES 342
Query: 267 YLKF-----DVFDLQLGNVTRDSDLRTLLLSTGNRSILVIEDIDCSVDLPDRRNGNENNA 321
+ F F +G + S +R L +R+ +I ID +D R+
Sbjct: 343 TVPFISMNGSEFVEVIGGLGA-SRIRGLFKEARSRAPCIIY-ID-EIDAIGRK------- 392
Query: 322 DAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLD 381
+S+ AGA F GG G+ TL+ LL +DG+ S G+ +++ +TN + LD
Sbjct: 393 --RSEGAGAG-----GGFGGGSGEEEQTLNQLLVEMDGMGS--GNGVVVLASTNRADVLD 443
Query: 382 PALLRPGRMDMHI 394
ALLRPGR D HI
Sbjct: 444 KALLRPGRFDRHI 456
>POMBASE|SPBC543.09 [details] [associations]
symbol:yta12 "mitochondrial m-AAA protease Yta12
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005745 "m-AAA complex" evidence=ISO] [GO:0006091 "generation
of precursor metabolites and energy" evidence=NAS] [GO:0006465
"signal peptide processing" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0008237 "metallopeptidase activity" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0033108 "mitochondrial respiratory chain complex
assembly" evidence=ISO] [GO:0045041 "protein import into
mitochondrial intermembrane space" evidence=ISO] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC543.09
GO:GO:0005524 GO:GO:0046872 EMBL:CU329671 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0004222 GO:GO:0006091
GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
KO:K08956 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 OMA:LYRFVTT
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0045041 GO:GO:0006465
GO:GO:0033108 RefSeq:NP_596797.1 ProteinModelPortal:Q9HGM3
SMR:Q9HGM3 STRING:Q9HGM3 MEROPS:M41.A14 EnsemblFungi:SPBC543.09.1
GeneID:2541079 KEGG:spo:SPBC543.09 NextBio:20802192 Uniprot:Q9HGM3
Length = 773
Score = 104 (41.7 bits), Expect = 8.3e-08, Sum P(2) = 8.3e-08
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 209 FDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMA 265
F +A + K IME + +F++ +FY+R+G RG +L GPPGTGK+ L A A
Sbjct: 295 FADVAGVDEAKEEIMEFV-KFLKNPKFYERLGAKIPRGAILSGPPGTGKTLLAKATA 350
Score = 102 (41.0 bits), Expect = 8.3e-08, Sum P(2) = 8.3e-08
Identities = 27/55 (49%), Positives = 32/55 (58%)
Query: 341 GGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFT-TNHKERLDPALLRPGRMDMHI 394
G + TL+ LL +DG SS E I+VF TN + LDPALLRPGR D I
Sbjct: 411 GSNDERESTLNQLLVEMDGFTSS---EHIVVFAGTNRPDVLDPALLRPGRFDRQI 462
>TAIR|locus:2009235 [details] [associations]
symbol:FTSH8 "FTSH protease 8" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA;IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=TAS] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AC007592
eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798 GO:GO:0010304
ProtClustDB:CLSN2679937 EMBL:AF419565 EMBL:BT002649 EMBL:BT003813
EMBL:AY045951 IPI:IPI00539195 RefSeq:NP_563766.3 UniGene:At.17054
ProteinModelPortal:Q8W585 SMR:Q8W585 STRING:Q8W585 MEROPS:M41.025
PaxDb:Q8W585 PRIDE:Q8W585 ProMEX:Q8W585 EnsemblPlants:AT1G06430.1
GeneID:837154 KEGG:ath:AT1G06430 GeneFarm:2474 TAIR:At1g06430
InParanoid:Q8W585 OMA:NANADEQ PhylomeDB:Q8W585
Genevestigator:Q8W585 Uniprot:Q8W585
Length = 685
Score = 104 (41.7 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 24/58 (41%), Positives = 35/58 (60%)
Query: 208 TFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMA 265
TFD +A + K ME ++ F+++ E + VG +G LL GPPGTGK+ L A+A
Sbjct: 218 TFDDVAGVDEAKQDFMEVVE-FLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIA 274
Score = 103 (41.3 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 26/65 (40%), Positives = 34/65 (52%)
Query: 330 AAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGR 389
A R+ T GG + TL+ LL +DG + G I+V TN + LD ALLRPGR
Sbjct: 323 AVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGV--IVVAATNRADILDSALLRPGR 380
Query: 390 MDMHI 394
D +
Sbjct: 381 FDRQV 385
Score = 38 (18.4 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 12/46 (26%), Positives = 24/46 (52%)
Query: 405 RLLAANYLGITDCEHKLVAEIETLLKTINITPAQVA-EQFMKSEDA 449
R++A N + KL +I+T +KT++ ++A Q + +A
Sbjct: 596 RMMARNSMS-----EKLANDIDTAVKTLSDKAYEIALSQIRNNREA 636
>ZFIN|ZDB-GENE-060929-204 [details] [associations]
symbol:spata5l1 "spermatogenesis associated 5-like
1" species:7955 "Danio rerio" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-060929-204 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 CTD:79029 EMBL:CU929075
EMBL:CU595864 IPI:IPI00804177 RefSeq:NP_001070056.2
UniGene:Dr.80583 Ensembl:ENSDART00000101660
Ensembl:ENSDART00000129459 GeneID:767648 KEGG:dre:767648
NextBio:20918042 Uniprot:F1Q8W3
Length = 748
Score = 155 (59.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 57/211 (27%), Positives = 96/211 (45%)
Query: 206 PATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMA 265
P ++ + D+K + + ++ +R E + R+G + RG LLYGPPG K++LV A A
Sbjct: 448 PIGWEQIGGLEDVKLKLKQSIEWPMRFPEAFVRLGVSRPRGVLLYGPPGCAKTTLVKAAA 507
Query: 266 NYLKFDVFDLQLGNV----TRDSDLRTLLLSTGNR----SILVIEDIDCSVDLPDRRNGN 317
+ F L + DS+ L R SI+ ++++D V R +G+
Sbjct: 508 SSSHCSFFSLSGAELFSPYVGDSEKTLAQLFAQARACAPSIVFLDEVDSMVG--SREDGS 565
Query: 318 ENNADAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDG------------LWSSCG 365
++ QS+ +V + D G + + + ++G L C
Sbjct: 566 SSSHSVQSQVL--SVLLTELDGVGVRTLERRSTCRKIALLEGGDQEDVRLHQMELQEVCN 623
Query: 366 DERIIVFTTNHKERLDPALLRPGRMDMHIHM 396
+ +IV TN E LD ALLRPGR+D I++
Sbjct: 624 KDVLIVAATNRPEALDSALLRPGRLDQIIYV 654
>ASPGD|ASPL0000032311 [details] [associations]
symbol:AN5747 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
EnsemblFungi:CADANIAT00003315 Uniprot:C8VFJ3
Length = 393
Score = 104 (41.7 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 34/102 (33%), Positives = 55/102 (53%)
Query: 175 MKDKTRV-LKMYTL---HRVP-DYDAIRWDSVKLEHPA--TFDTLAMEPDLKATIMEDLD 227
+K TRV L M TL +P + D + ++ + LE P F + D + E ++
Sbjct: 96 LKQGTRVALDMTTLTIMRMLPREVDPLVYN-MSLEDPGQINFAGIGGLNDQIRELREVIE 154
Query: 228 RFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLK 269
++ E ++RVG +G LLYGPPGTGK+ L A+A+ ++
Sbjct: 155 LPLKNPELFQRVGIKPPKGVLLYGPPGTGKTLLARAVASSME 196
Score = 92 (37.4 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 23/48 (47%), Positives = 30/48 (62%)
Query: 349 TLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHM 396
TL LLN +DG + G +II+ TN + LDPALLR GR+D I +
Sbjct: 260 TLMELLNQLDG-FDYLGKTKIIM-ATNRPDTLDPALLRAGRLDRKIEI 305
>TAIR|locus:2161258 [details] [associations]
symbol:RPT3 "regulatory particle triple-A ATPase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IGI;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009735 "response to cytokinin
stimulus" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0016020 EMBL:AB019228 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:AF123392 EMBL:AY070466 EMBL:BT020373
IPI:IPI00537564 RefSeq:NP_200637.1 UniGene:At.45955
ProteinModelPortal:Q9SEI4 SMR:Q9SEI4 IntAct:Q9SEI4 STRING:Q9SEI4
PaxDb:Q9SEI4 PRIDE:Q9SEI4 EnsemblPlants:AT5G58290.1 GeneID:835941
KEGG:ath:AT5G58290 GeneFarm:1500 TAIR:At5g58290 InParanoid:Q9SEI4
KO:K03063 OMA:DQTTNVK ProtClustDB:CLSN2686094 Genevestigator:Q9SEI4
GermOnline:AT5G58290 Uniprot:Q9SEI4
Length = 408
Score = 109 (43.4 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 219 KATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANY 267
K I E ++ + E YK++G RG LLYGPPGTGK+ L A+AN+
Sbjct: 164 KQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANH 212
Score = 87 (35.7 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 350 LSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
L LLN +DG + + ++ TN + LDPALLRPGR+D I
Sbjct: 279 LMELLNQMDGFDQTVNVK--VIMATNRADTLDPALLRPGRLDRKI 321
>CGD|CAL0004443 [details] [associations]
symbol:orf19.2057 species:5476 "Candida albicans" [GO:0005745
"m-AAA complex" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 CGD:CAL0004443 GO:GO:0016021
GO:GO:0005524 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 EMBL:AACQ01000031 EMBL:AACQ01000030
MEROPS:M41.003 RefSeq:XP_719505.1 RefSeq:XP_719629.1
ProteinModelPortal:Q5AD10 SMR:Q5AD10 GeneID:3638753 GeneID:3638884
KEGG:cal:CaO19.2057 KEGG:cal:CaO19.9604 Uniprot:Q5AD10
Length = 846
Score = 104 (41.7 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 333 RKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDM 392
+++K + G + TL+ LL +DG +S D +++ TN + LD AL+RPGR D
Sbjct: 480 QRSKGNATGANDERETTLNQLLVEMDGFDTS--DHVVVLAGTNRPDILDRALMRPGRFDR 537
Query: 393 HIHM 396
H+H+
Sbjct: 538 HVHI 541
Score = 95 (38.5 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 209 FDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMA 265
F +A + K +ME + +F++ E Y+++G RG +L GPPGTGK+ L A A
Sbjct: 372 FKDVAGMAEAKQEVMEFV-KFLQNPEKYEKLGAKIPRGAILSGPPGTGKTLLAKATA 427
Score = 47 (21.6 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 15/60 (25%), Positives = 27/60 (45%)
Query: 2 LSTENIPSASTLFATYASMTASLMLFRSMANDFLPEPVRNYACFAFRYFFKPRSKELTLV 61
+S E P ++ S+ SL+L +ND + N+ F Y K K++T++
Sbjct: 200 ISIELTPKNIFIYTLVFSLATSLILGMGSSND---DTEINFQSFVTDYLTKNLVKKVTVI 256
>DICTYBASE|DDB_G0293388 [details] [associations]
symbol:DDB_G0293388 "ATP-dependent metalloprotease"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0293388 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 EMBL:AAFI02000204
RefSeq:XP_629167.2 ProteinModelPortal:Q54BW7 STRING:Q54BW7
MEROPS:M41.A16 EnsemblProtists:DDB0304811 GeneID:8629188
KEGG:ddi:DDB_G0293388 InParanoid:Q54BW7 OMA:ICLAGRA Uniprot:Q54BW7
Length = 767
Score = 104 (41.7 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 29/102 (28%), Positives = 51/102 (50%)
Query: 164 YLPHVIELAKDMKDKTRVLKMYTLHRVPDYDAIRWDSVKLEHPATFDTLAMEPDLKATIM 223
+LP ++ L + +T +K ++ P Y A +D + P +FD + ++K +
Sbjct: 256 WLPVLLFLVYSLTSETSTVKEANGNK-PQYFAKEYDETN-QTPTSFDDVKGIQEVKEELE 313
Query: 224 EDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMA 265
E +D + + Y +G +G LL G PGTGK+ L A+A
Sbjct: 314 EIVDYLLHPTK-YNSIGAKLPKGVLLSGEPGTGKTLLARAIA 354
Score = 98 (39.6 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 31/96 (32%), Positives = 47/96 (48%)
Query: 346 HMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYCGPYGFR 405
H TL LL +DG + + +I+ TN LDPALLRPGR D HI + G
Sbjct: 413 HNETLLQLLTEMDGFEGN--SQIMIIGATNAPNSLDPALLRPGRFDRHISVPIPDMKGRS 470
Query: 406 LLAANYLGITDCEHKLVAEIETLLK-TINITPAQVA 440
+ +YL +H + + +T+ + T T A ++
Sbjct: 471 EIIDHYL--KKVKHTVEVKADTIARATPGFTGADLS 504
>UNIPROTKB|Q9FXT8 [details] [associations]
symbol:OsRPT4 "Os02g0199900 protein" species:39947 "Oryza
sativa Japonica Group" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0005618
GO:GO:0005730 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:AP008208
EMBL:CM000139 KO:K03064 EMBL:AP004869 TIGRFAMs:TIGR01242
OMA:EHKEVES GO:GO:0008540 ProtClustDB:CLSN2679874 EMBL:AP004812
EMBL:AB033536 RefSeq:NP_001046218.1 UniGene:Os.292 IntAct:Q9FXT8
STRING:Q9FXT8 EnsemblPlants:LOC_Os02g10640.1 GeneID:4328642
KEGG:osa:4328642 Uniprot:Q9FXT8
Length = 400
Score = 99 (39.9 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 35/116 (30%), Positives = 55/116 (47%)
Query: 177 DKTRVLKMYTLHRVPDYDAIRWDSVKLEHPA--TFDTLAMEPDLKATIMEDLDRFVRRKE 234
D T + M TL R + D + ++ + E P ++ + D + E ++ + E
Sbjct: 108 DMTTLTIMRTLPR--EVDPVVYNMLH-EDPGNVSYSAVGGLSDQIRELRESIELPLMNPE 164
Query: 235 FYKRVGRAWKRGYLLYGPPGTGKSSLVAAMA-----NYLKF---DVFDLQLGNVTR 282
+ RVG +G LLYGPPGTGK+ L A+A N+LK + D +G R
Sbjct: 165 LFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKIVSSAIIDKYIGESAR 220
Score = 96 (38.9 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 349 TLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHM 396
TL LLN +DG + G ++I+ TN + LDPALLRPGR+D I +
Sbjct: 263 TLMELLNQLDG-FDELGKVKMIM-ATNRPDVLDPALLRPGRLDRKIEI 308
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 100 (40.3 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 27/83 (32%), Positives = 45/83 (54%)
Query: 186 TLHRV-P-DYDAIRWDSVKLEH-PATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRA 242
T+ R+ P + D + ++ E TFD + + + E ++ ++ E ++RVG
Sbjct: 154 TIMRILPRETDPLVYNMTSFEQGEITFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIK 213
Query: 243 WKRGYLLYGPPGTGKSSLVAAMA 265
+G LLYGPPGTGK+ L A+A
Sbjct: 214 PPKGVLLYGPPGTGKTLLAKAVA 236
Score = 96 (38.9 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 22/48 (45%), Positives = 31/48 (64%)
Query: 349 TLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHM 396
TL LL +DG + + G +II+ TN + LDPALLRPGR+D + +
Sbjct: 304 TLMELLTQMDG-FDNLGQTKIIM-ATNRPDTLDPALLRPGRLDRKVEI 349
>WB|WBGene00004502 [details] [associations]
symbol:rpt-2 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0000003 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER EMBL:FO080494 PIR:T31800
RefSeq:NP_504558.1 ProteinModelPortal:O16368 SMR:O16368
IntAct:O16368 MINT:MINT-210699 STRING:O16368 PaxDb:O16368
PRIDE:O16368 EnsemblMetazoa:F29G9.5.1 EnsemblMetazoa:F29G9.5.2
GeneID:178988 KEGG:cel:CELE_F29G9.5 UCSC:F29G9.5 CTD:178988
WormBase:F29G9.5 GeneTree:ENSGT00550000074818 InParanoid:O16368
NextBio:903424 Uniprot:O16368
Length = 443
Score = 110 (43.8 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 25/55 (45%), Positives = 37/55 (67%)
Query: 340 AGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
+GG+ + T+ LLN +DG + S GD ++++ TN E LDPAL+RPGR+D I
Sbjct: 302 SGGEREIQRTMLELLNQLDG-FDSRGDVKVLM-ATNRIESLDPALIRPGRIDRKI 354
Score = 85 (35.0 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 222 IMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
I E ++ + E+Y+ +G +G +LYG PGTGK+ L A+AN
Sbjct: 200 IKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAKAVAN 244
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 100 (40.3 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 24/48 (50%), Positives = 31/48 (64%)
Query: 349 TLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHM 396
TL LLN +DG + G +II+ TN + LDPALLRPGR+D I +
Sbjct: 255 TLMELLNQMDG-FDYLGQTKIIM-ATNRPDTLDPALLRPGRLDRKIEI 300
Score = 94 (38.1 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 32/110 (29%), Positives = 56/110 (50%)
Query: 167 HVIELAKDMKDKTRVLKMYTLHRVPDYDAIRWDSVKLEHPA--TFDTLAMEPDLKATIME 224
H+++ + D T + M L R + D + ++ + +E P +F + + + E
Sbjct: 90 HLVQGVRVSLDMTTLTIMRILPR--EVDPLVYN-MSIEDPGDISFAGVGGLNEQIRELRE 146
Query: 225 DLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMA-----NYLK 269
++ ++ E + RVG +G LLYGPPGTGK+ L A+A N+LK
Sbjct: 147 VIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLK 196
>ASPGD|ASPL0000036562 [details] [associations]
symbol:AN2904 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 TIGRFAMs:TIGR01242 EnsemblFungi:CADANIAT00010185
OMA:EDAYSAQ Uniprot:C8VJ79
Length = 422
Score = 106 (42.4 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 219 KATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
K I E ++ + + YK++G RG LLYGPPGTGK+ LV A+AN
Sbjct: 175 KQEIREAVELPLTHFDLYKQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 222
Score = 88 (36.0 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 353 LLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
LLN +DG + + ++I+ TN + LDPALLRPGR+D I
Sbjct: 293 LLNQMDG-FEQTSNVKVIM-ATNRADTLDPALLRPGRLDRKI 332
>FB|FBgn0016983 [details] [associations]
symbol:smid "smallminded" species:7227 "Drosophila
melanogaster" [GO:0016887 "ATPase activity" evidence=ISS;NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0022008 GO:GO:0016887 HSSP:Q01853
KO:K14571 GeneTree:ENSGT00570000079239 UniGene:Dm.875 GeneID:38824
KEGG:dme:Dmel_CG8571 CTD:38824 FlyBase:FBgn0016983 GenomeRNAi:38824
NextBio:810567 RefSeq:NP_523959.2 ProteinModelPortal:Q9VS62
SMR:Q9VS62 IntAct:Q9VS62 MINT:MINT-754496 STRING:Q9VS62
PRIDE:Q9VS62 EnsemblMetazoa:FBtr0076851 UCSC:CG8571-RA
InParanoid:Q9VS62 OMA:EFDSLCP PhylomeDB:Q9VS62 ArrayExpress:Q9VS62
Bgee:Q9VS62 Uniprot:Q9VS62
Length = 944
Score = 120 (47.3 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 43/143 (30%), Positives = 76/143 (53%)
Query: 176 KDKTRVLKMYT-LHRVPDYDAIRW--DSVKLEHPA-TF-DTLAMEPDLKATIMEDLDRFV 230
KD V +Y LH+ D +R ++++HP +F D M+ LK + E L +
Sbjct: 213 KDHRNVPGLYQQLHQNQSRDRLRKFKRDLEVQHPTESFRDIGGMDSTLKE-LCEMLIH-I 270
Query: 231 RRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQ----LGNVTRDSD- 285
+ EFY ++G RG LL+GPPG GK+ L A++ LK + ++ +G ++ +S+
Sbjct: 271 KSPEFYFQLGLLPSRGLLLHGPPGCGKTFLARAISGQLKMPLMEIPATELIGGISGESEE 330
Query: 286 -LRTLL-LSTG-NRSILVIEDID 305
+R + + G + +L I++ID
Sbjct: 331 RIREVFDQAIGYSPCVLFIDEID 353
Score = 82 (33.9 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 341 GGKGQHMLT--LSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSY 398
GG G + T ++ LL +DG+ G I+ TN + +DPA+LRPGR+D +++ +
Sbjct: 774 GGDGNNSGTRIVNQLLTEMDGVEERKGV--YILAATNRPDIIDPAILRPGRLDTILYVGF 831
Score = 61 (26.5 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 350 LSGLLNFIDGLWSS-CGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
+S L++ +D L ++ G +++ T + LDP L R GR D I
Sbjct: 371 VSQLISSLDNLKANEFGQSVVVIAATTRPDVLDPGLRRIGRFDHEI 416
>TIGR_CMR|CBU_1352 [details] [associations]
symbol:CBU_1352 "ATP-dependent metalloprotease FtsH"
species:227377 "Coxiella burnetii RSA 493" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HSSP:P28691 HOGENOM:HOG000217276 KO:K03798
MEROPS:M41.001 OMA:RSIIDQC RefSeq:NP_820341.1
ProteinModelPortal:Q83BY5 SMR:Q83BY5 PRIDE:Q83BY5 GeneID:1209258
KEGG:cbu:CBU_1352 PATRIC:17931447 ProtClustDB:CLSK914722
BioCyc:CBUR227377:GJ7S-1342-MONOMER Uniprot:Q83BY5
Length = 647
Score = 102 (41.0 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 29/77 (37%), Positives = 40/77 (51%)
Query: 199 DSVKLEHPATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKS 258
D VK+ TFD +A + K + E L F+R ++R+G G LL GPPGTGK+
Sbjct: 149 DQVKV----TFDDVAGVDEAKEEVKE-LVEFLRDPGKFQRLGGKMPCGVLLVGPPGTGKT 203
Query: 259 SLVAAMANYLKFDVFDL 275
L A+A K F +
Sbjct: 204 LLAKAVAGEAKVPFFTI 220
Score = 97 (39.2 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 28/66 (42%), Positives = 33/66 (50%)
Query: 330 AAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFT-TNHKERLDPALLRPG 388
A R GG + TL+ LL +DG G E IIV TN + LDPALLRPG
Sbjct: 259 AVGRHRGAGLGGGHDEREQTLNQLLVEMDGFE---GKEGIIVMAATNRPDVLDPALLRPG 315
Query: 389 RMDMHI 394
R D +
Sbjct: 316 RFDRQV 321
>UNIPROTKB|Q2GIT4 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 103 (41.3 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 27/68 (39%), Positives = 36/68 (52%)
Query: 330 AAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGR 389
A R GG + TL+ LL +DG S+ G +I+ TN + LDPALLRPGR
Sbjct: 261 AVGRHRGIGLGGGNDEREQTLNQLLVEMDGFESNEGV--VIIAATNRPDVLDPALLRPGR 318
Query: 390 MDMHIHMS 397
D + +S
Sbjct: 319 FDRQVTIS 326
Score = 95 (38.5 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 22/68 (32%), Positives = 38/68 (55%)
Query: 208 TFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANY 267
TFD +A + K ++E +D F++ ++ + ++G +G LL G PGTGK+ L A+A
Sbjct: 156 TFDDVAGIEEAKEELIEIVD-FLKHRQKFTKLGGKIPKGCLLIGSPGTGKTLLARAIAGE 214
Query: 268 LKFDVFDL 275
F +
Sbjct: 215 ANVPFFSI 222
>TIGR_CMR|APH_1179 [details] [associations]
symbol:APH_1179 "ATP-dependent metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0000910 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 103 (41.3 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 27/68 (39%), Positives = 36/68 (52%)
Query: 330 AAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGR 389
A R GG + TL+ LL +DG S+ G +I+ TN + LDPALLRPGR
Sbjct: 261 AVGRHRGIGLGGGNDEREQTLNQLLVEMDGFESNEGV--VIIAATNRPDVLDPALLRPGR 318
Query: 390 MDMHIHMS 397
D + +S
Sbjct: 319 FDRQVTIS 326
Score = 95 (38.5 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 22/68 (32%), Positives = 38/68 (55%)
Query: 208 TFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANY 267
TFD +A + K ++E +D F++ ++ + ++G +G LL G PGTGK+ L A+A
Sbjct: 156 TFDDVAGIEEAKEELIEIVD-FLKHRQKFTKLGGKIPKGCLLIGSPGTGKTLLARAIAGE 214
Query: 268 LKFDVFDL 275
F +
Sbjct: 215 ANVPFFSI 222
>SGD|S000004389 [details] [associations]
symbol:AFG2 "ATPase of the CDC48/PAS1/SEC18 (AAA) family,
forms a hexameric complex" species:4932 "Saccharomyces cerevisiae"
[GO:0030687 "preribosome, large subunit precursor"
evidence=IDA;IMP] [GO:0042493 "response to drug" evidence=IMP]
[GO:0005622 "intracellular" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0042273 "ribosomal
large subunit biogenesis" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000004389 GO:GO:0005524 GO:GO:0042493
EMBL:BK006945 GO:GO:0016887 eggNOG:COG0464 HOGENOM:HOG000223225
KO:K14575 OrthoDB:EOG49CTH0 GO:GO:0042273 EMBL:L14615 EMBL:U19729
EMBL:AY693116 PIR:S39110 RefSeq:NP_013501.1
ProteinModelPortal:P32794 SMR:P32794 DIP:DIP-4470N IntAct:P32794
MINT:MINT-566202 STRING:P32794 PaxDb:P32794 PeptideAtlas:P32794
EnsemblFungi:YLR397C GeneID:851113 KEGG:sce:YLR397C CYGD:YLR397c
GeneTree:ENSGT00700000104502 OMA:MLLRCVA NextBio:967827
Genevestigator:P32794 GermOnline:YLR397C GO:GO:0030687
Uniprot:P32794
Length = 780
Score = 107 (42.7 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 28/56 (50%), Positives = 34/56 (60%)
Query: 346 HMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYCGP 401
H+LT LLN IDG+ G +IV TN + +D ALLRPGR+D HI Y GP
Sbjct: 635 HVLT--SLLNEIDGVEELKGV--VIVAATNRPDEIDAALLRPGRLDRHI---YVGP 683
Score = 93 (37.8 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 35/130 (26%), Positives = 62/130 (47%)
Query: 203 LEHPATF-DTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLV 261
LE P + + + +LK + E + + E + R+G + +G LLYGPPG K+
Sbjct: 508 LEMPKVYWSDIGGQEELKTKMKEMIQLPLEASETFARLGISAPKGVLLYGPPGCSKTLTA 567
Query: 262 AAMA-----NYLKF---DVFDLQLGNVTRDSDLRTLLLSTGNR--SILVIEDIDCSVDLP 311
A+A N+L ++F+ +G R +R + + SI+ ++ID P
Sbjct: 568 KALATESGINFLAVKGPEIFNKYVGESERA--IREIFRKARSAAPSIIFFDEIDALS--P 623
Query: 312 DRRNGNENNA 321
DR +G+ +A
Sbjct: 624 DR-DGSSTSA 632
>SGD|S000002165 [details] [associations]
symbol:RPT2 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IDA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IDA] [GO:0043171 "peptide
catabolic process" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002165 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0016887 GO:GO:0043171 GO:GO:0006511
GO:GO:0045732 EMBL:Z48432 GO:GO:0070682 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T
PDBsum:4B4T KO:K03062 OMA:FIRNQER GeneTree:ENSGT00550000074818
OrthoDB:EOG4FN7S6 EMBL:X81070 EMBL:L17040 EMBL:Z74055 PIR:S46613
RefSeq:NP_010277.1 ProteinModelPortal:P40327 SMR:P40327
DIP:DIP-6282N IntAct:P40327 MINT:MINT-632695 STRING:P40327
PaxDb:P40327 PeptideAtlas:P40327 PRIDE:P40327 EnsemblFungi:YDL007W
GeneID:851557 KEGG:sce:YDL007W NextBio:968983 Genevestigator:P40327
GermOnline:YDL007W Uniprot:P40327
Length = 437
Score = 107 (42.7 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 25/55 (45%), Positives = 36/55 (65%)
Query: 340 AGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
+GG+ + T+ LLN +DG + GD ++I+ TN E LDPAL+RPGR+D I
Sbjct: 296 SGGEREIQRTMLELLNQLDG-FDDRGDVKVIM-ATNKIETLDPALIRPGRIDRKI 348
Score = 86 (35.3 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 222 IMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
I E ++ + E Y+ +G +G +LYG PGTGK+ L A+AN
Sbjct: 194 IKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVAN 238
>DICTYBASE|DDB_G0284517 [details] [associations]
symbol:psmC6 "26S protease regulatory subunit S10B"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0284517
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000153_GR
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
EMBL:AAFI02000066 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
RefSeq:XP_638541.1 ProteinModelPortal:Q54PJ1 STRING:Q54PJ1
EnsemblProtists:DDB0232968 GeneID:8624634 KEGG:ddi:DDB_G0284517
OMA:HAANITK ProtClustDB:CLSZ2429012 Uniprot:Q54PJ1
Length = 393
Score = 101 (40.6 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 29/81 (35%), Positives = 45/81 (55%)
Query: 349 TLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYCGPYG----F 404
TL LLN +DG + + +II+ TN + LDPALLRPGR+D I + G
Sbjct: 260 TLMELLNQMDG-FDTLSKVKIIM-ATNRPDVLDPALLRPGRLDRKIEIPLPNEAGRVDVL 317
Query: 405 RLLAANYLGITDCEHKLVAEI 425
++ AAN D +++ +A++
Sbjct: 318 KIHAANITKHGDVDYEAIAKL 338
Score = 91 (37.1 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 234 EFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLK 269
E + RVG +G LLYGPPGTGK+ L A+A+ L+
Sbjct: 161 ELFIRVGIKAPKGVLLYGPPGTGKTLLARAIASNLE 196
>CGD|CAL0002187 [details] [associations]
symbol:orf19.6432 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
CGD:CAL0002187 GO:GO:0005524 EMBL:AACQ01000073 EMBL:AACQ01000072
eggNOG:COG0464 KO:K14575 GO:GO:0017111 InterPro:IPR009010
SUPFAM:SSF50692 SMART:SM01073 RefSeq:XP_716187.1 RefSeq:XP_716270.1
ProteinModelPortal:Q5A331 GeneID:3642106 GeneID:3642160
KEGG:cal:CaO19.13790 KEGG:cal:CaO19.6432 Uniprot:Q5A331
Length = 766
Score = 106 (42.4 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 24/48 (50%), Positives = 32/48 (66%)
Query: 350 LSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMS 397
L+ LLN IDG+ G +IV TN +DPALLRPGR+D HI+++
Sbjct: 621 LTSLLNEIDGVEELKGV--VIVGATNKPTEIDPALLRPGRLDRHIYVA 666
Score = 93 (37.8 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 34/149 (22%), Positives = 68/149 (45%)
Query: 188 HRVPDYDAIRWDSVKLEHPAT-FDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRG 246
H +P+ + LE P + + + +LK ++E + + + +K +G + +G
Sbjct: 476 HALPEIRPSAMREIFLEMPKVHWSDIGGQEELKRKLIEVVQLPLEASDSFKNLGVSSPKG 535
Query: 247 YLLYGPPGTGKSSLVAAMA-----NYLKF---DVFDLQLGNVTRDSDLRTLLLST--GNR 296
LLYGPPG K+ A+A N+L ++F+ +G R +R + +
Sbjct: 536 VLLYGPPGCSKTLTAKALATESGLNFLAVKGPEIFNKYVGESERA--IREIFRKARAASP 593
Query: 297 SILVIEDIDCSVDLPDRRNGNENNADAQS 325
SI+ ++ID + R+G+ + A +
Sbjct: 594 SIIFFDEIDA---IAGDRDGDSSTTAASN 619
Score = 78 (32.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 218 LKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
LK+TI L+ +F G + RG LL+GPPGTGK+ L+ +AN
Sbjct: 241 LKSTIELPLNNPTLFSDF----GISPPRGILLHGPPGTGKTMLLRCVAN 285
>ASPGD|ASPL0000049719 [details] [associations]
symbol:AN2213 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0043171 "peptide catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001307
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER
OrthoDB:EOG4FN7S6 EMBL:AACD01000035 RefSeq:XP_659817.1
ProteinModelPortal:Q5BB67 STRING:Q5BB67
EnsemblFungi:CADANIAT00008897 GeneID:2875757 KEGG:ani:AN2213.2
Uniprot:Q5BB67
Length = 460
Score = 107 (42.7 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 25/55 (45%), Positives = 36/55 (65%)
Query: 340 AGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
+GG+ + T+ LLN +DG + GD ++I+ TN E LDPAL+RPGR+D I
Sbjct: 318 SGGEREIQRTMLELLNQLDG-FDDRGDVKVIM-ATNKIETLDPALIRPGRIDRKI 370
Score = 86 (35.3 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 25/86 (29%), Positives = 42/86 (48%)
Query: 181 VLKMYTLHRVPDYDAIRWDSVKLEHPATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVG 240
V+ + T P ++ D E A D +E ++ + E ++ + E Y+ +G
Sbjct: 178 VVGVLTEESDPLVSVMKLDKAPTESYA--DIGGLESQIQE-VRESVELPLLHPELYEEMG 234
Query: 241 RAWKRGYLLYGPPGTGKSSLVAAMAN 266
+G +LYG PGTGK+ L A+AN
Sbjct: 235 IKPPKGVILYGAPGTGKTLLAKAVAN 260
>UNIPROTKB|Q3AFJ8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 RefSeq:YP_359086.1
ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8 STRING:Q3AFJ8 MEROPS:M41.021
GeneID:3726212 KEGG:chy:CHY_0214 PATRIC:21273609 OMA:TGKADDE
BioCyc:CHYD246194:GJCN-215-MONOMER Uniprot:Q3AFJ8
Length = 619
Score = 111 (44.1 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 29/65 (44%), Positives = 36/65 (55%)
Query: 330 AAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGR 389
A R+ GG + TL+ LL +DG S+ G II+ TN + LDPALLRPGR
Sbjct: 261 AVGRQRGAGLGGGHDEREQTLNQLLVEMDGFNSNEGI--IIIAATNRPDILDPALLRPGR 318
Query: 390 MDMHI 394
D HI
Sbjct: 319 FDRHI 323
Score = 85 (35.0 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 208 TFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMA 265
TF +A ++K + E ++ F++ Y +G +G LL+G PGTGK+ L A+A
Sbjct: 156 TFADVAGIDEVKEELAEIVE-FLKNPRKYNELGARIPKGVLLFGQPGTGKTLLARAIA 212
>TIGR_CMR|CHY_0214 [details] [associations]
symbol:CHY_0214 "cell division protein FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
RefSeq:YP_359086.1 ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8
STRING:Q3AFJ8 MEROPS:M41.021 GeneID:3726212 KEGG:chy:CHY_0214
PATRIC:21273609 OMA:TGKADDE BioCyc:CHYD246194:GJCN-215-MONOMER
Uniprot:Q3AFJ8
Length = 619
Score = 111 (44.1 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 29/65 (44%), Positives = 36/65 (55%)
Query: 330 AAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGR 389
A R+ GG + TL+ LL +DG S+ G II+ TN + LDPALLRPGR
Sbjct: 261 AVGRQRGAGLGGGHDEREQTLNQLLVEMDGFNSNEGI--IIIAATNRPDILDPALLRPGR 318
Query: 390 MDMHI 394
D HI
Sbjct: 319 FDRHI 323
Score = 85 (35.0 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 208 TFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMA 265
TF +A ++K + E ++ F++ Y +G +G LL+G PGTGK+ L A+A
Sbjct: 156 TFADVAGIDEVKEELAEIVE-FLKNPRKYNELGARIPKGVLLFGQPGTGKTLLARAIA 212
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 96 (38.9 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 27/87 (31%), Positives = 50/87 (57%)
Query: 185 YTLHRV-PD-YDA-IRWDSVKLEHPATFDTLA-MEPDLKATIMEDLDRFVRRKEFYKRVG 240
Y LH++ P+ D + V+ +T++ + ++ +K I E ++ V+ E + +G
Sbjct: 131 YALHKLLPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKE-IKEVIELPVKHPELFDALG 189
Query: 241 RAWKRGYLLYGPPGTGKSSLVAAMANY 267
A +G LL+GPPGTGK+ L A+A++
Sbjct: 190 IAQPKGVLLFGPPGTGKTLLARAVAHH 216
Score = 96 (38.9 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 36/112 (32%), Positives = 56/112 (50%)
Query: 340 AGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYC 399
+GG + T+ LLN +DG ++ + ++ TN + LDPALLRPGR+D I
Sbjct: 273 SGGDSEVQRTMLELLNQLDGFEATKNIK--VIMATNRIDILDPALLRPGRIDRKIEF--- 327
Query: 400 GPYGFRLLAANYLGITDCEHKLVAEIETLLKTINITPAQVAEQFMKSEDADV 451
P A+ L I K+ L++ IN+ A++AEQ + A+V
Sbjct: 328 -PAPDEKARADILKIHS--RKM-----NLMRGINM--AKIAEQIPGASGAEV 369
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 101 (40.6 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 28/67 (41%), Positives = 38/67 (56%)
Query: 331 AVRKNKTD-FAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGR 389
A+ +TD GG + TL LL +DG + + GD +II TN + LDPA+LRPGR
Sbjct: 274 AIAAKRTDALTGGDREVQRTLMQLLAEMDG-FDARGDVKIIG-ATNRPDILDPAILRPGR 331
Query: 390 MDMHIHM 396
D I +
Sbjct: 332 FDRIIEV 338
Score = 91 (37.1 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 222 IMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMA 265
I E ++ ++ E +++VG +G LLYGPPGTGK+ L A+A
Sbjct: 182 IREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVA 225
>CGD|CAL0005257 [details] [associations]
symbol:RPT2 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045732 "positive regulation
of protein catabolic process" evidence=IEA] [GO:0043171 "peptide
catabolic process" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005257 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000051 EMBL:AACQ01000050
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03062 RefSeq:XP_717718.1
RefSeq:XP_717812.1 ProteinModelPortal:Q5A7M6 STRING:Q5A7M6
GeneID:3640525 GeneID:3640683 KEGG:cal:CaO19.12895
KEGG:cal:CaO19.5440 Uniprot:Q5A7M6
Length = 465
Score = 106 (42.4 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 25/55 (45%), Positives = 36/55 (65%)
Query: 340 AGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
+GG+ + T+ LLN +DG + GD ++I+ TN E LDPAL+RPGR+D I
Sbjct: 300 SGGEREIQRTMLELLNQLDG-FDDRGDIKVIM-ATNKIESLDPALIRPGRIDRKI 352
Score = 86 (35.3 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 222 IMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
I E ++ + E Y+ +G +G +LYG PGTGK+ L A+AN
Sbjct: 198 IKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVAN 242
>UNIPROTKB|Q8NB90 [details] [associations]
symbol:SPATA5 "Spermatogenesis-associated protein 5"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
GO:GO:0007275 GO:GO:0005739 GO:GO:0005524 GO:GO:0005737
GO:GO:0030154 GO:GO:0007283 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 KO:K14575 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 EMBL:AC021205
EMBL:AF361489 EMBL:AF479656 EMBL:AK091384 EMBL:AC026402
EMBL:AC097492 EMBL:AC109357 EMBL:BC048217 IPI:IPI00329583
IPI:IPI00890715 IPI:IPI00890727 RefSeq:NP_660208.2
UniGene:Hs.709648 ProteinModelPortal:Q8NB90 SMR:Q8NB90
IntAct:Q8NB90 STRING:Q8NB90 PhosphoSite:Q8NB90 DMDM:308153554
PaxDb:Q8NB90 PRIDE:Q8NB90 DNASU:166378 Ensembl:ENST00000274008
GeneID:166378 KEGG:hsa:166378 UCSC:uc003iey.3 UCSC:uc003iez.4
CTD:166378 GeneCards:GC04P123844 H-InvDB:HIX0022056 HGNC:HGNC:18119
HPA:HPA036451 MIM:613940 neXtProt:NX_Q8NB90 PharmGKB:PA38294
HOVERGEN:HBG108504 InParanoid:Q8NB90 OMA:NDIRPSA OrthoDB:EOG43FGWF
PhylomeDB:Q8NB90 GenomeRNAi:166378 NextBio:88589 Bgee:Q8NB90
CleanEx:HS_SPATA5 Genevestigator:Q8NB90 Uniprot:Q8NB90
Length = 893
Score = 114 (45.2 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 39/132 (29%), Positives = 66/132 (50%)
Query: 208 TFDTLA-MEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
T+D + + LKA I E ++ +++ E +K G RG LLYGPPGTGK+ + A+AN
Sbjct: 351 TYDMIGGLSSQLKA-IREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVAN 409
Query: 267 ----YLKF----DVFDLQLGNVTRDSDLRTLLLSTGNR--SILVIEDIDCSVDLPDRRNG 316
Y+ ++ G ++ LR + R SI+ I+++D L +R G
Sbjct: 410 EVGAYVSVINGPEIISKFYGET--EAKLRQIFAEATLRHPSIIFIDELDA---LCPKREG 464
Query: 317 NENNADAQSKAA 328
+N + + A+
Sbjct: 465 AQNEVEKRVVAS 476
Score = 84 (34.6 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 350 LSGLLNFIDGLWSSCGDERIIVF-TTNHKERLDPALLRPGRMDMHIHM 396
++ LL +DG+ S + +++V TN LD AL RPGR D I +
Sbjct: 474 VASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEI 521
Score = 80 (33.2 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 23/66 (34%), Positives = 36/66 (54%)
Query: 331 AVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRM 390
AV + + AG +L + LL +DG+ D I+ TN +R+D AL+RPGR+
Sbjct: 733 AVERGSSLGAGNVADRVL--AQLLTEMDGI-EQLKDVTILA-ATNRPDRIDKALMRPGRI 788
Query: 391 DMHIHM 396
D I++
Sbjct: 789 DRIIYV 794
>ASPGD|ASPL0000072959 [details] [associations]
symbol:AN4557 species:162425 "Emericella nidulans"
[GO:0097002 "mitochondrial inner boundary membrane" evidence=IEA]
[GO:0005745 "m-AAA complex" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0006461 "protein
complex assembly" evidence=IEA] [GO:0006465 "signal peptide
processing" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 HOGENOM:HOG000217277 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:LYRFVTT MEROPS:M41.002 OrthoDB:EOG4J14HG
EMBL:BN001303 EMBL:AACD01000078 RefSeq:XP_662161.1
ProteinModelPortal:Q5B4H3 SMR:Q5B4H3 STRING:Q5B4H3
EnsemblFungi:CADANIAT00005881 GeneID:2872358 KEGG:ani:AN4557.2
Uniprot:Q5B4H3
Length = 883
Score = 110 (43.8 bits), Expect = 7.6e-07, Sum P(3) = 7.6e-07
Identities = 25/66 (37%), Positives = 42/66 (63%)
Query: 331 AVRKNKT--DFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPG 388
A+ K+++ +F+GG + TL+ +L +DG +S D+ +++ TN + LD AL+RPG
Sbjct: 505 AIGKSRSAKNFSGGNDERESTLNQILTEMDGFNTS--DQVVVLAGTNRPDVLDKALMRPG 562
Query: 389 RMDMHI 394
R D HI
Sbjct: 563 RFDRHI 568
Score = 92 (37.4 bits), Expect = 7.6e-07, Sum P(3) = 7.6e-07
Identities = 22/57 (38%), Positives = 33/57 (57%)
Query: 209 FDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMA 265
F +A + K IME + F++ E ++++G RG +L GPPGTGK+ L A A
Sbjct: 401 FSDVAGMDEAKVEIMEFVS-FLKSPERFQKLGAKIPRGAILSGPPGTGKTLLAKATA 456
Score = 38 (18.4 bits), Expect = 7.6e-07, Sum P(3) = 7.6e-07
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 178 KTRVLKMYTLHRVPDYDAIR 197
++R+ +YT HRV + + R
Sbjct: 34 QSRLSSLYTAHRVRTFTSQR 53
>CGD|CAL0001552 [details] [associations]
symbol:PR26 species:5476 "Candida albicans" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0001552 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 103 (41.3 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 22/48 (45%), Positives = 31/48 (64%)
Query: 219 KATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
K I E ++ + + + Y ++G RG LLYGPPGTGK+ LV A+AN
Sbjct: 164 KQEIKEAVELPLTQGDLYSQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 211
Score = 86 (35.3 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 353 LLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
LLN +DG + ++I+ TN + LDPALLRPGR+D I
Sbjct: 282 LLNQMDG-FDQTSTVKVIM-ATNRADTLDPALLRPGRLDRKI 321
>UNIPROTKB|Q5A0L8 [details] [associations]
symbol:PR26 "Likely 26S proteasome regulatory particle
ATPase Rpt3p" species:237561 "Candida albicans SC5314" [GO:0005838
"proteasome regulatory particle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0001552
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 103 (41.3 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 22/48 (45%), Positives = 31/48 (64%)
Query: 219 KATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
K I E ++ + + + Y ++G RG LLYGPPGTGK+ LV A+AN
Sbjct: 164 KQEIKEAVELPLTQGDLYSQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 211
Score = 86 (35.3 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 353 LLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
LLN +DG + ++I+ TN + LDPALLRPGR+D I
Sbjct: 282 LLNQMDG-FDQTSTVKVIM-ATNRADTLDPALLRPGRLDRKI 321
>TAIR|locus:2028200 [details] [associations]
symbol:AT1G45000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 GO:GO:0005618 GO:GO:0005730 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AC007915 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
ProtClustDB:CLSN2679874 EMBL:AY062709 EMBL:AY114673 IPI:IPI00531336
RefSeq:NP_175120.1 UniGene:At.27257 ProteinModelPortal:Q9MAK9
SMR:Q9MAK9 IntAct:Q9MAK9 STRING:Q9MAK9 PaxDb:Q9MAK9 PRIDE:Q9MAK9
EnsemblPlants:AT1G45000.1 GeneID:841065 KEGG:ath:AT1G45000
GeneFarm:2760 TAIR:At1g45000 InParanoid:Q9MAK9 PhylomeDB:Q9MAK9
Uniprot:Q9MAK9
Length = 399
Score = 96 (38.9 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 349 TLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHM 396
TL LLN +DG + G ++I+ TN + LDPALLRPGR+D I +
Sbjct: 262 TLMELLNQLDG-FDQLGKVKMIM-ATNRPDVLDPALLRPGRLDRKIEI 307
Score = 92 (37.4 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 25/69 (36%), Positives = 36/69 (52%)
Query: 222 IMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMA-----NYLKF---DVF 273
+ E ++ + E + RVG +G LLYGPPGTGK+ L A+A N+LK +
Sbjct: 151 LRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAII 210
Query: 274 DLQLGNVTR 282
D +G R
Sbjct: 211 DKYIGESAR 219
>POMBASE|SPCC576.10c [details] [associations]
symbol:rpt3 "19S proteasome regulatory subunit Rpt3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005524
"ATP binding" evidence=IC] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0004175 "endopeptidase activity" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC576.10c GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0016887 GO:GO:0006511
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03063 OMA:DQTTNVK PIR:T41420 RefSeq:NP_588437.1
ProteinModelPortal:O74894 SMR:O74894 STRING:O74894 PRIDE:O74894
EnsemblFungi:SPCC576.10c.1 GeneID:2539539 KEGG:spo:SPCC576.10c
OrthoDB:EOG46HKKC NextBio:20800700 Uniprot:O74894
Length = 389
Score = 104 (41.7 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 219 KATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
K + E ++ + + + Y+++G RG LLYGPPGTGK+ LV A+AN
Sbjct: 143 KQEVREAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 190
Score = 83 (34.3 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 21/47 (44%), Positives = 26/47 (55%)
Query: 353 LLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHM-SY 398
LL +DG G ++ TN + LDPALLRPGR+D I SY
Sbjct: 261 LLTQMDGF--DQGANVKVIMATNRADTLDPALLRPGRLDRKIEFPSY 305
>SGD|S000002802 [details] [associations]
symbol:RPT3 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002802 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0006511 GO:GO:0017111 GO:GO:0045899 EMBL:U32274
KO:K07101 RefSeq:NP_010687.3 GeneID:852008 KEGG:sce:YDR399W
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 OrthoDB:EOG46HKKC
EMBL:X73570 EMBL:U06229 PIR:S69678 RefSeq:NP_010682.3 PDB:2DZN
PDB:2DZO PDBsum:2DZN PDBsum:2DZO ProteinModelPortal:P33298
SMR:P33298 DIP:DIP-1587N IntAct:P33298 MINT:MINT-383865
STRING:P33298 PaxDb:P33298 PeptideAtlas:P33298 EnsemblFungi:YDR394W
GeneID:852003 KEGG:sce:YDR394W EvolutionaryTrace:P33298
NextBio:970192 Genevestigator:P33298 GermOnline:YDR394W
Uniprot:P33298
Length = 428
Score = 105 (42.0 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 219 KATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLK 269
K I E ++ + + + Y+++G RG LLYGPPGTGK+ LV A+AN K
Sbjct: 181 KQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTK 231
Score = 83 (34.3 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 353 LLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
LL +DG S + ++ TN + LDPALLRPGR+D I
Sbjct: 299 LLTQMDGFDQSTNVK--VIMATNRADTLDPALLRPGRLDRKI 338
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 102 (41.0 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 32/105 (30%), Positives = 50/105 (47%)
Query: 220 ATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLGN 279
A I E ++ +R + +K +G RG LLYGPPGTGK+ + A+AN F +
Sbjct: 232 AQIREMVELPLRHPQLFKSIGIKPPRGVLLYGPPGTGKTLMARAVANETGAFFFLINGPE 291
Query: 280 VTR------DSDLRTLLLSTGNRS--ILVIEDIDCSVDLPDRRNG 316
+ +S+LR S I+ I++ID ++ NG
Sbjct: 292 IMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTNG 336
Score = 94 (38.1 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 217 DLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
++K + E + V E + + G + RG L YGPPGTGK+ L A+AN
Sbjct: 503 EVKQDLREQVQYPVDHPEKFLKFGLSPSRGVLFYGPPGTGKTMLAKAVAN 552
Score = 93 (37.8 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 27/75 (36%), Positives = 41/75 (54%)
Query: 322 DAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLD 381
D+ +KA G +V AGG ++ + LL +DG+ S ++ TN E+LD
Sbjct: 599 DSIAKARGGSVGD-----AGGASDRVV--NQLLTEMDGMTSK--KNVFVIGATNRPEQLD 649
Query: 382 PALLRPGRMDMHIHM 396
PAL RPGR+D I++
Sbjct: 650 PALCRPGRLDSLIYV 664
Score = 72 (30.4 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 21/73 (28%), Positives = 36/73 (49%)
Query: 331 AVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRM 390
A ++ KT+ G+ + + +S LL +DG+ +++ TN +DPAL R GR
Sbjct: 328 APKREKTN---GEVERRV-VSQLLTLMDGM--KARSNVVVMAATNRPNSIDPALRRFGRF 381
Query: 391 DMHIHMSYCGPYG 403
D + + P G
Sbjct: 382 DREVDIGIPDPTG 394
>UNIPROTKB|P0C5C0 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:1773 "Mycobacterium tuberculosis" [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP;IDA] [GO:0006979 "response
to oxidative stress" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0040007
"growth" evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0040007 GO:GO:0006979 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0046872
EMBL:BX842583 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0010468
HOGENOM:HOG000217276 KO:K03798 PIR:C70956 RefSeq:NP_218127.1
RefSeq:NP_338259.1 RefSeq:YP_006517099.1 ProteinModelPortal:P0C5C0
SMR:P0C5C0 PRIDE:P0C5C0 EnsemblBacteria:EBMYCT00000001212
EnsemblBacteria:EBMYCT00000069111 GeneID:13317218 GeneID:885732
GeneID:926520 KEGG:mtc:MT3714 KEGG:mtu:Rv3610c KEGG:mtv:RVBD_3610c
PATRIC:18129921 TubercuList:Rv3610c OMA:RSEMIAR
ProtClustDB:CLSK792593 Uniprot:P0C5C0
Length = 760
Score = 105 (42.0 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 38/113 (33%), Positives = 54/113 (47%)
Query: 330 AAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGR 389
A R+ GG + TL+ LL +DG G I++ TN + LDPALLRPGR
Sbjct: 266 AVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRAGV--ILIAATNRPDILDPALLRPGR 323
Query: 390 MDMHIHMSYCGPYGFR-LLAANYLGITDCEHKLVAEIETLLK-TINITPAQVA 440
D I +S G R +L + G A+++ L K T+ +T A +A
Sbjct: 324 FDRQIPVSNPDLAGRRAVLRVHSKGKPMAAD---ADLDGLAKRTVGMTGADLA 373
Score = 89 (36.4 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 208 TFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMA 265
TF +A + + E D F++ Y+ +G +G LLYGPPGTGK+ L A+A
Sbjct: 161 TFADVAGVDEAVEELYEIKD-FLQNPSRYQALGAKIPKGVLLYGPPGTGKTLLARAVA 217
>DICTYBASE|DDB_G0272120 [details] [associations]
symbol:rcaA "peptidase M41, FtsH domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0272120 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GenomeReviews:CM000151_GR GO:GO:0004222
EMBL:AAFI02000008 GO:GO:0030163 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 ProtClustDB:CLSZ2846729 RefSeq:XP_645267.1
ProteinModelPortal:Q75JS8 SMR:Q75JS8 STRING:Q75JS8
EnsemblProtists:DDB0185211 GeneID:8618433 KEGG:ddi:DDB_G0272120
InParanoid:Q75JS8 OMA:ERTIVAH Uniprot:Q75JS8
Length = 844
Score = 100 (40.3 bits), Expect = 1.4e-06, Sum P(4) = 1.4e-06
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 200 SVKLEHPATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSS 259
+VK TF +A + K IME + F++ YK++G +G +L GPPGTGK+
Sbjct: 344 AVKATSTTTFKDVAGMDEAKEEIMEFVS-FLKDPSRYKKLGARIPKGAILSGPPGTGKTL 402
Query: 260 LVAAMA 265
L A A
Sbjct: 403 LAKATA 408
Score = 98 (39.6 bits), Expect = 1.4e-06, Sum P(4) = 1.4e-06
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 349 TLSGLLNFIDGLWSSCGDERIIVFT-TNHKERLDPALLRPGRMDMHIHM 396
TL+ LL +DG S+ G ++VF TN + LDPALLRPGR D I++
Sbjct: 475 TLNQLLVEMDGFSSTSG---VVVFAGTNRSDVLDPALLRPGRFDRQIYV 520
Score = 40 (19.1 bits), Expect = 1.4e-06, Sum P(4) = 1.4e-06
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 96 KTPNEKVITIRLEKNEQIIDS 116
K NEK T++ +KN+ +++
Sbjct: 110 KFENEKETTVKQDKNKNDVEN 130
Score = 38 (18.4 bits), Expect = 1.4e-06, Sum P(4) = 1.4e-06
Identities = 15/45 (33%), Positives = 22/45 (48%)
Query: 401 PYGFRLLAANYLGITDCEHKLVAEI--ETLLKTIN-ITPAQVAEQ 442
PYG + A G T+ E AE+ E+ K ++ I P Q E+
Sbjct: 792 PYGEQTTWAELTGETENEKIKEAELSTESQQKEVDSIEPQQPKEE 836
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 95 (38.5 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 349 TLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHM 396
TL LLN +DG + + G +II+ TN + LDPALLR GR+D I +
Sbjct: 295 TLMELLNQMDG-FDTLGQTKIIM-ATNRPDTLDPALLRAGRLDRKIEI 340
Score = 92 (37.4 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 31/99 (31%), Positives = 53/99 (53%)
Query: 173 KDMKDKTRV-LKMYTLH--RV-P-DYDAIRWDSVKLEH-PATFDTLAMEPDLKATIMEDL 226
+++K+ RV L M TL R+ P + D + ++ E +F+ + + + E +
Sbjct: 129 ENLKNGVRVSLDMTTLTIMRILPREVDPLVYNMTTFEPGEISFNGIGGLTEQIRELREVI 188
Query: 227 DRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMA 265
+ ++ E + RVG +G LLYGPPGTGK+ L A+A
Sbjct: 189 ELPLKNPELFTRVGIKPPKGVLLYGPPGTGKTLLAKAVA 227
>DICTYBASE|DDB_G0289003 [details] [associations]
symbol:psmC4 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0006972 "hyperosmotic response"
evidence=IEP] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=ISS] [GO:0005838 "proteasome regulatory
particle" evidence=ISS] [GO:0004175 "endopeptidase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0289003 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GO:GO:0006508 GenomeReviews:CM000154_GR GO:GO:0006972
GO:GO:0004175 EMBL:AAFI02000129 GO:GO:0030163 GO:GO:0017111
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03063 OMA:DQTTNVK EMBL:L16578
PIR:JN0611 RefSeq:XP_636422.1 ProteinModelPortal:P34123 SMR:P34123
STRING:P34123 PRIDE:P34123 EnsemblProtists:DDB0191435
GeneID:8626913 KEGG:ddi:DDB_G0289003 ProtClustDB:PTZ00454
GO:GO:0005838 Uniprot:P34123
Length = 403
Score = 96 (38.9 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 219 KATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANY 267
K + E ++ + YK++G RG LLYGPPGTGK+ L A+A++
Sbjct: 159 KQEMREAVELPLTHHNLYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHH 207
Score = 90 (36.7 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 350 LSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
L LLN +DG S + ++ TN ++ LDPALLRPGR+D I
Sbjct: 274 LMELLNQMDGFDVSVNVK--VIMATNRQDTLDPALLRPGRLDRKI 316
>TIGR_CMR|CJE_1259 [details] [associations]
symbol:CJE_1259 "cell division protein FtsH"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
OMA:RARASMP RefSeq:YP_179247.1 ProteinModelPortal:Q5HTY8 SMR:Q5HTY8
STRING:Q5HTY8 GeneID:3231766 KEGG:cjr:CJE1259 PATRIC:20044314
ProtClustDB:CLSK872348 BioCyc:CJEJ195099:GJC0-1285-MONOMER
Uniprot:Q5HTY8
Length = 645
Score = 149 (57.5 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 57/195 (29%), Positives = 91/195 (46%)
Query: 201 VKLEHPAT-FDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSS 259
V E P F +A + K + E +D F++ E Y ++G +G LL GPPGTGK+
Sbjct: 168 VNSEKPKVKFSDVAGVEEAKEEVKEIVD-FLKYPERYIKLGAKIPKGLLLVGPPGTGKTL 226
Query: 260 LVAAMANYLKFDVFDLQLGNVTRDSDLRTLLLSTGNRSILVIEDIDCSVDLPDRRNGNEN 319
L A+A D+ +V+ S + + + G + + + + + P +E
Sbjct: 227 LAKAVAGEA-----DVPFFSVSGSSFIE-MFVGVGASRVRDLFE-NAKKEAPAIVFIDEI 279
Query: 320 NADAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKER 379
+A +S+AA + GG + TL+ LL +DG + I++ TN E
Sbjct: 280 DAIGKSRAASGMM--------GGNDEREQTLNQLLAEMDGFGTESSPV-IVLAATNRPEV 330
Query: 380 LDPALLRPGRMDMHI 394
LD ALLRPGR D +
Sbjct: 331 LDAALLRPGRFDRQV 345
Score = 39 (18.8 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 6/12 (50%), Positives = 11/12 (91%)
Query: 418 EHKLVAEIETLL 429
+H+L+AE++ LL
Sbjct: 488 KHELIAEVDVLL 499
>TIGR_CMR|BA_0064 [details] [associations]
symbol:BA_0064 "cell division protein FtsH" species:198094
"Bacillus anthracis str. Ames" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0051301 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0030163 HOGENOM:HOG000217277 TIGRFAMs:TIGR01241 KO:K03798
ProtClustDB:CLSK886567 HSSP:Q9LCZ4 OMA:QINMEEV RefSeq:NP_842633.1
RefSeq:YP_016667.1 RefSeq:YP_026351.1 ProteinModelPortal:Q81VX5
SMR:Q81VX5 IntAct:Q81VX5 DNASU:1086600
EnsemblBacteria:EBBACT00000009752 EnsemblBacteria:EBBACT00000016661
EnsemblBacteria:EBBACT00000022411 GeneID:1086600 GeneID:2819677
GeneID:2851579 KEGG:ban:BA_0064 KEGG:bar:GBAA_0064 KEGG:bat:BAS0064
BioCyc:BANT260799:GJAJ-73-MONOMER BioCyc:BANT261594:GJ7F-75-MONOMER
Uniprot:Q81VX5
Length = 633
Score = 102 (41.0 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 27/65 (41%), Positives = 35/65 (53%)
Query: 330 AAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGR 389
A R+ GG + TL+ LL +DG ++ G II+ TN + LDPALLRPGR
Sbjct: 265 AVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGANEGI--IIIAATNRPDILDPALLRPGR 322
Query: 390 MDMHI 394
D I
Sbjct: 323 FDRQI 327
Score = 80 (33.2 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 209 FDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMA 265
F +A + K ++E ++ F++ + VG +G LL GPPGTGK+ L A+A
Sbjct: 161 FRDVAGADEEKQELVEVVE-FLKDPRKFAEVGARIPKGVLLVGPPGTGKTLLARAVA 216
Score = 49 (22.3 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 12/49 (24%), Positives = 26/49 (53%)
Query: 134 GKGNSHSMRPEKRLFELT--FHQTHKDMVLNSYLPHVIELAKDMKDKTR 180
G+ + ++P+ +FE+ F+ + + +Y P+ EL K + DK +
Sbjct: 47 GEVRNVQLQPKNGVFEVKGQFNNSSQGEQFVTYAPNTEELQKKINDKAQ 95
>GENEDB_PFALCIPARUM|PFD0665c [details] [associations]
symbol:PFD0665c "26s proteasome aaa-ATPase
subunit Rpt3, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
EMBL:AL844503 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK ProtClustDB:PTZ00454 GO:GO:0005838
RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1 IntAct:Q8I1V1
MINT:MINT-1573247 PRIDE:Q8I1V1 EnsemblProtists:PFD0665c:mRNA
GeneID:812570 KEGG:pfa:PFD0665c EuPathDB:PlasmoDB:PF3D7_0413600
Uniprot:Q8I1V1
Length = 392
Score = 96 (38.9 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 234 EFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
E Y+++G G L+YGPPGTGK+ LV A+AN
Sbjct: 162 ELYEKIGIEPPMGILIYGPPGTGKTMLVKAVAN 194
Score = 89 (36.4 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 353 LLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
LLN +DG S + ++ TN + LDPALLRPGR+D I
Sbjct: 265 LLNQMDGFDKSTNVK--VIMATNRADTLDPALLRPGRLDRKI 304
>UNIPROTKB|Q8I1V1 [details] [associations]
symbol:PFD0665c "26S proteasome AAA-ATPase subunit RPT3,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 HSSP:Q01853 EMBL:AL844503 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK ProtClustDB:PTZ00454
GO:GO:0005838 RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1
IntAct:Q8I1V1 MINT:MINT-1573247 PRIDE:Q8I1V1
EnsemblProtists:PFD0665c:mRNA GeneID:812570 KEGG:pfa:PFD0665c
EuPathDB:PlasmoDB:PF3D7_0413600 Uniprot:Q8I1V1
Length = 392
Score = 96 (38.9 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 234 EFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
E Y+++G G L+YGPPGTGK+ LV A+AN
Sbjct: 162 ELYEKIGIEPPMGILIYGPPGTGKTMLVKAVAN 194
Score = 89 (36.4 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 353 LLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
LLN +DG S + ++ TN + LDPALLRPGR+D I
Sbjct: 265 LLNQMDGFDKSTNVK--VIMATNRADTLDPALLRPGRLDRKI 304
>UNIPROTKB|B7Z5E2 [details] [associations]
symbol:PSMC2 "cDNA FLJ52353, highly similar to 26S protease
regulatory subunit 7" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0030163 GO:GO:0017111 GO:GO:0008233 EMBL:AC004668
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 UniGene:Hs.437366
HGNC:HGNC:9548 ChiTaRS:PSMC2 EMBL:AC093701 EMBL:AK298821
IPI:IPI01015219 SMR:B7Z5E2 STRING:B7Z5E2 Ensembl:ENST00000544811
Uniprot:B7Z5E2
Length = 296
Score = 107 (42.7 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 338 DFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMS 397
D AGG + T+ L+N +DG + G+ ++++ TN + LDPAL+RPGR+D I S
Sbjct: 150 DGAGGDNEVQRTMLELINQLDG-FDPRGNIKVLM-ATNRPDTLDPALMRPGRLDRKIEFS 207
Score = 73 (30.8 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 234 EFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
E + +G +G LL+GPPGTGK+ A+AN
Sbjct: 62 ERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 94
>DICTYBASE|DDB_G0282241 [details] [associations]
symbol:DDB_G0282241 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0282241 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 EMBL:AAFI02000046 RefSeq:XP_640304.1
ProteinModelPortal:Q54ST1 EnsemblProtists:DDB0205288 GeneID:8623480
KEGG:ddi:DDB_G0282241 InParanoid:Q54ST1 OMA:IEMISID Uniprot:Q54ST1
Length = 825
Score = 103 (41.3 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 35/129 (27%), Positives = 66/129 (51%)
Query: 208 TFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANY 267
++D + D+K + + ++ KE +++ G + +G +LYGPPG K++LV A+A+
Sbjct: 568 SWDDIGGLDDIKEELRQAIEWPNLYKESFEKFGLSPPKGIILYGPPGCSKTTLVKAVASS 627
Query: 268 LKFDVFDLQLGNVTR----DSD--LRTLLLSTGNR--SILVIEDIDCSVDLPDRRNGNEN 319
K L + DS+ +R + SIL ++ID V +RN ++N
Sbjct: 628 SKLSFLSLSGATIFSPYLGDSEQTIRDIFKKARQTTPSILFFDEIDAIVS---KRNLSDN 684
Query: 320 NA--DAQSK 326
++ +AQS+
Sbjct: 685 SSGDNAQSR 693
Score = 89 (36.4 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 22/59 (37%), Positives = 32/59 (54%)
Query: 333 RKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMD 391
++N +D + G LS LN +DG+ G I++ TN + +D ALLRPGR D
Sbjct: 678 KRNLSDNSSGDNAQSRVLSTFLNEMDGVEQLNGV--IVIGATNRLDMIDNALLRPGRFD 734
>TIGR_CMR|GSU_1809 [details] [associations]
symbol:GSU_1809 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952859.2 GeneID:2688702 KEGG:gsu:GSU1809 PATRIC:22026473
ProtClustDB:CLSK828573 BioCyc:GSUL243231:GH27-1860-MONOMER
Uniprot:Q74C66
Length = 610
Score = 99 (39.9 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 26/65 (40%), Positives = 34/65 (52%)
Query: 330 AAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGR 389
A R GG + TL+ LL +DG S+ G I++ TN + LDPALLRPGR
Sbjct: 256 AVGRHRGAGLGGGHDEREQTLNQLLVEMDGFESNEGV--ILIAATNRPDVLDPALLRPGR 313
Query: 390 MDMHI 394
D +
Sbjct: 314 FDRQV 318
Score = 90 (36.7 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 20/58 (34%), Positives = 36/58 (62%)
Query: 208 TFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMA 265
TF+ +A + K + E++ +F++ + + ++G +G LL GPPGTGK+ L A+A
Sbjct: 151 TFEDVAGVDEAKEEL-EEIIQFLKDPKKFTKLGGRIPKGVLLVGPPGTGKTLLARAVA 207
>TIGR_CMR|DET_0391 [details] [associations]
symbol:DET_0391 "ATP-dependent metalloprotease FtsH"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:LEIIAMR MEROPS:M41.021
RefSeq:YP_181136.1 ProteinModelPortal:Q3Z9G3 SMR:Q3Z9G3
STRING:Q3Z9G3 GeneID:3230280 KEGG:det:DET0391 PATRIC:21607849
ProtClustDB:CLSK837509 BioCyc:DETH243164:GJNF-391-MONOMER
Uniprot:Q3Z9G3
Length = 608
Score = 97 (39.2 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 44/181 (24%), Positives = 76/181 (41%)
Query: 330 AAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGR 389
A R+ GG + TL+ +L +DG I++ TN + LDPALLRPGR
Sbjct: 262 AVGRQRGAGLGGGHDEREQTLNQILVEMDGF--DTDTSVIVIAATNRPDILDPALLRPGR 319
Query: 390 MDMHIHMSYCGPYGFRLLAANYLGITDCEHKLVAEIETLLKTINITPAQVAEQFMKSEDA 449
D + + G + K+ A+ + L T+N+ +A+Q + A
Sbjct: 320 FDRRVVLDKPDITGREAIL-----------KIHAKGKPLADTVNLE--NLAKQTVGFSGA 366
Query: 450 DVXXXXXXXXXXXXXRNGSGDVDGDEDEINLDEVAI---LESKKLKTQDQIQDKGKETAA 506
D+ +N V+ ++ E ++D V +S+++ TQ++ ET
Sbjct: 367 DLANLLNEAAILAARKNRKV-VETEDLEESIDRVIAGPERKSRRISTQEKEVTAYHETGH 425
Query: 507 G 507
G
Sbjct: 426 G 426
Score = 92 (37.4 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 203 LEHPA-TFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLV 261
++ P TF +A + K + E ++ F++ +E ++ +G +G LL GPPGTGK+ L
Sbjct: 151 MDKPTITFANVAGVDEAKQEVGEVVE-FLKSREKFQALGARIPKGILLIGPPGTGKTLLA 209
Query: 262 AAMA 265
A+A
Sbjct: 210 KAIA 213
>DICTYBASE|DDB_G0270784 [details] [associations]
symbol:psmC1 "TAT binding protein alpha"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0270784 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0030587 GO:GO:0000910 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 HSSP:Q9WZ49 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03062 OMA:FIRNQER RefSeq:XP_646726.1 ProteinModelPortal:Q55BV5
STRING:Q55BV5 PRIDE:Q55BV5 EnsemblProtists:DDB0232964
GeneID:8617698 KEGG:ddi:DDB_G0270784 ProtClustDB:PTZ00361
Uniprot:Q55BV5
Length = 439
Score = 101 (40.6 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 340 AGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
+GG+ + T+ LLN +DG + + D ++I+ TN E LDPAL+RPGR+D I
Sbjct: 298 SGGEREIQRTMLELLNQLDG-FDARTDVKVIM-ATNRIETLDPALIRPGRIDRKI 350
Score = 84 (34.6 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 234 EFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
E Y+ +G +G +LYG PGTGK+ L A+AN
Sbjct: 208 ELYEEIGIKPPKGVILYGEPGTGKTLLAKAVAN 240
>FB|FBgn0036224 [details] [associations]
symbol:Rpt4R "Regulatory particle triple-A ATPase 4-related"
species:7227 "Drosophila melanogaster" [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014296
GO:GO:0006200 GO:GO:0006974 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 EMBL:AY089267 RefSeq:NP_648525.1
UniGene:Dm.5141 SMR:Q9VTQ9 IntAct:Q9VTQ9 MINT:MINT-869141
STRING:Q9VTQ9 EnsemblMetazoa:FBtr0076040 GeneID:39351
KEGG:dme:Dmel_CG7257 UCSC:CG7257-RA CTD:39351 FlyBase:FBgn0036224
InParanoid:Q9VTQ9 OMA:CAIWTEA OrthoDB:EOG4VT4CM GenomeRNAi:39351
NextBio:813228 Uniprot:Q9VTQ9
Length = 398
Score = 97 (39.2 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 349 TLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHM 396
TL LLN +DG + + G ++I+ TN + LDPALLRPGR+D + +
Sbjct: 265 TLMELLNQMDG-FDALGQVKMIM-ATNRPDTLDPALLRPGRLDRKLEI 310
Score = 87 (35.7 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 234 EFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYL 268
+ + RVG + +G LLYGPPGTGK+ L A+A+ +
Sbjct: 166 DIFLRVGISPPKGCLLYGPPGTGKTLLARAIASQM 200
>POMBASE|SPCC965.04c [details] [associations]
symbol:SPCC965.04c "mitochondrial inner membrane i-AAA
protease complex subunit Yme1 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0004176 "ATP-dependent peptidase
activity" evidence=ISO] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO] [GO:0007005
"mitochondrion organization" evidence=ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0031942 "i-AAA complex" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC965.04c GO:GO:0016021 GO:GO:0005524 EMBL:CU329672
GO:GO:0046872 GO:GO:0004222 GO:GO:0006515 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0007005 GO:GO:0004176
HOGENOM:HOG000217276 MEROPS:M41.004 GO:GO:0031942 PIR:T41657
RefSeq:NP_588514.1 ProteinModelPortal:O59824 SMR:O59824
STRING:O59824 EnsemblFungi:SPCC965.04c.1 GeneID:2538746
KEGG:spo:SPCC965.04c KO:K08955 OMA:LANANMS OrthoDB:EOG4FR40W
NextBio:20799930 Uniprot:O59824
Length = 709
Score = 99 (39.9 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 26/54 (48%), Positives = 31/54 (57%)
Query: 346 HML-TLSGLLNFIDGLWSSCGDERIIVF--TTNHKERLDPALLRPGRMDMHIHM 396
HM TL+ LL +DG + +VF TN E LDPAL RPGR D HIH+
Sbjct: 382 HMRQTLNQLLVDLDGFSKNEDLAHPVVFIGATNFPESLDPALTRPGRFDRHIHV 435
Score = 91 (37.1 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 223 MEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMA 265
+E++ F+R + R+G RG LL GPPGTGK+ L A+A
Sbjct: 279 LEEIVDFLRDPTHFTRLGGKLPRGVLLTGPPGTGKTMLARAVA 321
>UNIPROTKB|P0AAI3 [details] [associations]
symbol:ftsH species:83333 "Escherichia coli K-12"
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0006508
"proteolysis" evidence=IEA;IDA] [GO:0043273 "CTPase activity"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA;IDA]
[GO:0030145 "manganese ion binding" evidence=IDA] [GO:0016021
"integral to membrane" evidence=IEA;IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0008270 GO:GO:0006508 EMBL:U18997
GO:GO:0004222 GO:GO:0016887 GO:GO:0030145 GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0043273 EMBL:U01376
HOGENOM:HOG000217276 KO:K03798 EMBL:M83138 PIR:S35109
RefSeq:NP_417645.1 RefSeq:YP_491363.1 PDB:1LV7 PDBsum:1LV7
ProteinModelPortal:P0AAI3 SMR:P0AAI3 DIP:DIP-35828N IntAct:P0AAI3
MINT:MINT-1226643 MEROPS:M41.001 PaxDb:P0AAI3 PRIDE:P0AAI3
EnsemblBacteria:EBESCT00000000369 EnsemblBacteria:EBESCT00000000370
EnsemblBacteria:EBESCT00000017485 GeneID:12933986 GeneID:947690
KEGG:ecj:Y75_p3098 KEGG:eco:b3178 PATRIC:32121774 EchoBASE:EB1469
EcoGene:EG11506 OMA:RSIIDQC ProtClustDB:PRK10733
BioCyc:EcoCyc:EG11506-MONOMER BioCyc:ECOL316407:JW3145-MONOMER
BioCyc:MetaCyc:EG11506-MONOMER SABIO-RK:P0AAI3
EvolutionaryTrace:P0AAI3 Genevestigator:P0AAI3 Uniprot:P0AAI3
Length = 644
Score = 99 (39.9 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 27/66 (40%), Positives = 35/66 (53%)
Query: 330 AAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFT-TNHKERLDPALLRPG 388
A R+ GG + TL+ +L +DG G+E IIV TN + LDPALLRPG
Sbjct: 255 AVGRQRGAGLGGGHDEREQTLNQMLVEMDGFE---GNEGIIVIAATNRPDVLDPALLRPG 311
Query: 389 RMDMHI 394
R D +
Sbjct: 312 RFDRQV 317
Score = 90 (36.7 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 208 TFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANY 267
TF +A + K + E L ++R ++++G +G L+ GPPGTGK+ L A+A
Sbjct: 150 TFADVAGCDEAKEEVAE-LVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGE 208
Query: 268 LKFDVFDL 275
K F +
Sbjct: 209 AKVPFFTI 216
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 104 (41.7 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 32/101 (31%), Positives = 48/101 (47%)
Query: 173 KDMKDKTRVL---KMYTLHRVPDYDAIRWDSVKLEHPATFDTLAMEPDLKATIMED---L 226
KD+ +RV + YTLH++ S+ L T M L I E +
Sbjct: 100 KDVTPSSRVALRNESYTLHKILPNKVDPLVSLMLVEKVPDSTYEMVGGLDKQIQEIKEVI 159
Query: 227 DRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANY 267
+ V+ E + +G +G LLYGPPGTGK+ L A+A++
Sbjct: 160 ELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLARAVAHH 200
Score = 79 (32.9 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 342 GKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
G + T+ LLN +DG ++ + ++ TN + LD ALLRPGR+D I
Sbjct: 258 GDSEVQRTMLELLNQLDGFEATKNIK--VIMATNRIDVLDQALLRPGRIDRKI 308
>SGD|S000004695 [details] [associations]
symbol:YTA12 "Component of the mitochondrial inner membrane
m-AAA protease" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS;IDA;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0006508 "proteolysis" evidence=IEA;IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;IDA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA;IMP] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006461 "protein complex assembly" evidence=IMP]
[GO:0006465 "signal peptide processing" evidence=IMP] [GO:0005745
"m-AAA complex" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0031966 "mitochondrial membrane" evidence=IEA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 SGD:S000004695 EMBL:U09358 GO:GO:0005524
GO:GO:0006461 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0008237 GO:GO:0004222 GO:GO:0016887 EMBL:BK006946
GO:GO:0030163 EMBL:Z49259 eggNOG:COG0465
GeneTree:ENSGT00530000063070 KO:K08956 TIGRFAMs:TIGR01241
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0097002 GO:GO:0045041
GO:GO:0006465 EMBL:X81068 EMBL:AY693099 PIR:S54465
RefSeq:NP_013807.1 ProteinModelPortal:P40341 SMR:P40341
DIP:DIP-889N IntAct:P40341 MINT:MINT-596896 STRING:P40341
MEROPS:M41.003 PaxDb:P40341 PeptideAtlas:P40341
EnsemblFungi:YMR089C GeneID:855114 KEGG:sce:YMR089C CYGD:YMR089c
OMA:NFSGAND NextBio:978455 Genevestigator:P40341 GermOnline:YMR089C
Uniprot:P40341
Length = 825
Score = 103 (41.3 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 37/112 (33%), Positives = 56/112 (50%)
Query: 327 AAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLR 386
A G A + K +F+G + TL+ +L +DG + D +++ TN + LD ALLR
Sbjct: 451 AIGKA--RQKGNFSGANDERENTLNQMLVEMDGFTPA--DHVVVLAGTNRPDILDKALLR 506
Query: 387 PGRMDMHIHMSYCGPYGFRLLAANYLGITDCEH-KLVAEIETLLKTIN-ITP 436
PGR D HI++ G + + A +L H KL EI L + +TP
Sbjct: 507 PGRFDRHINIDKPELEGRKAIFAVHL-----HHLKLAGEIFDLKNRLAALTP 553
Score = 88 (36.0 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 22/57 (38%), Positives = 32/57 (56%)
Query: 209 FDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMA 265
F +A + K IME + F++ Y+++G RG +L GPPGTGK+ L A A
Sbjct: 347 FKDVAGCDEAKEEIMEFVS-FLKEPSRYEKMGAKIPRGAILSGPPGTGKTLLAKATA 402
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 99 (39.9 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 22/62 (35%), Positives = 39/62 (62%)
Query: 207 ATFDTLA-MEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMA 265
+T++ + ++ +K I E ++ V+ E + +G A +G LLYGPPGTGK+ L A+A
Sbjct: 172 STYEMVGGLDTQIKE-IKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVA 230
Query: 266 NY 267
++
Sbjct: 231 HH 232
Score = 85 (35.0 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 341 GGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
GG + T+ LLN +DG ++ + ++ TN + LD ALLRPGR+D I
Sbjct: 290 GGDSEVQRTMLELLNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRIDRKI 341
>UNIPROTKB|Q2GFA1 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST
MEROPS:M41.001 ProtClustDB:CLSK749654 RefSeq:YP_507882.1
ProteinModelPortal:Q2GFA1 SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708
KEGG:ech:ECH_1098 PATRIC:20577534
BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 96 (38.9 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 27/68 (39%), Positives = 35/68 (51%)
Query: 330 AAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGR 389
A R GG + TL+ LL +DG S+ G II+ TN + LD ALLRPGR
Sbjct: 259 AVGRHRGIGLGGGNDEREQTLNQLLVEMDGFESNEGV--IIIAATNRPDVLDSALLRPGR 316
Query: 390 MDMHIHMS 397
D + +S
Sbjct: 317 FDRQVTIS 324
Score = 92 (37.4 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 21/68 (30%), Positives = 39/68 (57%)
Query: 208 TFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANY 267
TF+ +A + K ++E +D F++ ++ ++++G +G LL G PGTGK+ L A+A
Sbjct: 154 TFNDVAGIDEAKEELIEIVD-FLKHRQRFQKLGGKIPKGCLLIGSPGTGKTLLARAIAGE 212
Query: 268 LKFDVFDL 275
F +
Sbjct: 213 ANVPFFSI 220
>TIGR_CMR|ECH_1098 [details] [associations]
symbol:ECH_1098 "ATP-dependent metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 GO:GO:0000910
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_507882.1 ProteinModelPortal:Q2GFA1
SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708 KEGG:ech:ECH_1098
PATRIC:20577534 BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 96 (38.9 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 27/68 (39%), Positives = 35/68 (51%)
Query: 330 AAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGR 389
A R GG + TL+ LL +DG S+ G II+ TN + LD ALLRPGR
Sbjct: 259 AVGRHRGIGLGGGNDEREQTLNQLLVEMDGFESNEGV--IIIAATNRPDVLDSALLRPGR 316
Query: 390 MDMHIHMS 397
D + +S
Sbjct: 317 FDRQVTIS 324
Score = 92 (37.4 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 21/68 (30%), Positives = 39/68 (57%)
Query: 208 TFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANY 267
TF+ +A + K ++E +D F++ ++ ++++G +G LL G PGTGK+ L A+A
Sbjct: 154 TFNDVAGIDEAKEELIEIVD-FLKHRQRFQKLGGKIPKGCLLIGSPGTGKTLLARAIAGE 212
Query: 268 LKFDVFDL 275
F +
Sbjct: 213 ANVPFFSI 220
>SGD|S000000819 [details] [associations]
symbol:AFG3 "Component, with Yta12p, of the mitochondrial
inner membrane m-AAA pro" species:4932 "Saccharomyces cerevisiae"
[GO:0016887 "ATPase activity" evidence=ISS;IMP;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0031966 "mitochondrial
membrane" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA;IMP] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA;IMP]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IDA] [GO:0001302 "replicative cell
aging" evidence=IMP] [GO:0002181 "cytoplasmic translation"
evidence=IMP] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006461 "protein complex assembly"
evidence=IMP] [GO:0006465 "signal peptide processing" evidence=IMP]
[GO:0005745 "m-AAA complex" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 SGD:S000000819
GO:GO:0005524 GO:GO:0006461 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0001302 GO:GO:0004222
GO:GO:0016887 EMBL:BK006939 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277 KO:K08956
TIGRFAMs:TIGR01241 OMA:LYRFVTT EMBL:X81066 EMBL:X76643 EMBL:U18778
PIR:S46611 RefSeq:NP_010933.1 ProteinModelPortal:P39925 SMR:P39925
DIP:DIP-802N IntAct:P39925 MINT:MINT-563722 STRING:P39925
MEROPS:M41.002 PaxDb:P39925 PeptideAtlas:P39925
EnsemblFungi:YER017C GeneID:856737 KEGG:sce:YER017C CYGD:YER017c
OrthoDB:EOG4J14HG NextBio:982861 Genevestigator:P39925
GermOnline:YER017C GO:GO:0005745 GO:GO:0097002 GO:GO:0002181
GO:GO:0045041 GO:GO:0006465 Uniprot:P39925
Length = 761
Score = 141 (54.7 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 67/239 (28%), Positives = 107/239 (44%)
Query: 208 TFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN- 266
+F +A + K IME + F++ Y ++G RG +L GPPGTGK+ L A A
Sbjct: 286 SFKNVAGCDEAKQEIMEFV-HFLKNPGKYTKLGAKIPRGAILSGPPGTGKTLLAKATAGE 344
Query: 267 ----YLKF---DVFDLQLG-NVTRDSDLRTLLLSTGNRSILVIEDIDCSVDLPDRRNGNE 318
+L + ++ +G +R DL T S SI+ I++ID G E
Sbjct: 345 ANVPFLSVSGSEFVEMFVGVGASRVRDLFTQARSMAP-SIIFIDEIDAI--------GKE 395
Query: 319 NNADAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKE 378
+ G A+ G + TL+ LL +DG +S D+ +++ TN +
Sbjct: 396 -------RGKGGAL-------GGANDEREATLNQLLVEMDGFTTS--DQVVVLAGTNRPD 439
Query: 379 RLDPALLRPGRMDMHIHMSYCGPYGFRLLAANYLGITDCEHKLVAEIETLL-KTINITP 436
LD AL+RPGR D HI + G + + +L + + L ++ L K +TP
Sbjct: 440 VLDNALMRPGRFDRHIQIDSPDVNGRQQIYLVHLKRLNLDPLLTDDMNNLSGKLATLTP 498
>UNIPROTKB|Q55700 [details] [associations]
symbol:ftsH2 "ATP-dependent zinc metalloprotease FtsH 2"
species:1111708 "Synechocystis sp. PCC 6803 substr. Kazusa"
[GO:0010206 "photosystem II repair" evidence=IMP] [GO:0042651
"thylakoid membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009523 "photosystem II" evidence=IDA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:BA000022 GenomeReviews:BA000022_GR GO:GO:0042651 GO:GO:0010206
HOGENOM:HOG000217276 KO:K03798 PIR:S76378 RefSeq:NP_442160.1
RefSeq:YP_005652219.1 ProteinModelPortal:Q55700 SMR:Q55700
IntAct:Q55700 STRING:Q55700 MEROPS:M41.017 GeneID:12253438
GeneID:952628 KEGG:syn:slr0228 KEGG:syy:SYNGTS_2266 PATRIC:23841938
OMA:NTASTRM Uniprot:Q55700
Length = 627
Score = 96 (38.9 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 24/65 (36%), Positives = 33/65 (50%)
Query: 330 AAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGR 389
A R+ GG + TL+ LL +DG + G II+ TN + LD AL+RPGR
Sbjct: 275 AVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGI--IIIAATNRPDVLDSALMRPGR 332
Query: 390 MDMHI 394
D +
Sbjct: 333 FDRQV 337
Score = 91 (37.1 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 22/57 (38%), Positives = 33/57 (57%)
Query: 209 FDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMA 265
FD +A + K + E + F+++ E + VG +G LL GPPGTGK+ L A+A
Sbjct: 171 FDDVAGIDEAKEELQEVVT-FLKQPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIA 226
>UNIPROTKB|Q9KU86 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241 HSSP:P28691
KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299 RefSeq:NP_230286.1
ProteinModelPortal:Q9KU86 SMR:Q9KU86 DNASU:2615425 GeneID:2615425
KEGG:vch:VC0637 PATRIC:20080383 ProtClustDB:CLSK874054
Uniprot:Q9KU86
Length = 651
Score = 98 (39.6 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 27/66 (40%), Positives = 35/66 (53%)
Query: 330 AAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFT-TNHKERLDPALLRPG 388
A R+ GG + TL+ +L +DG G+E IIV TN + LDPALLRPG
Sbjct: 259 AVGRQRGAGVGGGHDEREQTLNQMLVEMDGFE---GNEGIIVIAATNRPDVLDPALLRPG 315
Query: 389 RMDMHI 394
R D +
Sbjct: 316 RFDRQV 321
Score = 89 (36.4 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 208 TFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANY 267
TF +A + K + E +D ++R ++++G G L+ GPPGTGK+ L A+A
Sbjct: 154 TFSDVAGCDEAKEDVKELVD-YLRDPSRFQKLGGKIPTGVLMVGPPGTGKTLLAKAIAGE 212
Query: 268 LKFDVFDL 275
K F +
Sbjct: 213 AKVPFFTI 220
>TIGR_CMR|VC_0637 [details] [associations]
symbol:VC_0637 "cell division protein FtsH" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0000910 "cytokinesis"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299
RefSeq:NP_230286.1 ProteinModelPortal:Q9KU86 SMR:Q9KU86
DNASU:2615425 GeneID:2615425 KEGG:vch:VC0637 PATRIC:20080383
ProtClustDB:CLSK874054 Uniprot:Q9KU86
Length = 651
Score = 98 (39.6 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 27/66 (40%), Positives = 35/66 (53%)
Query: 330 AAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFT-TNHKERLDPALLRPG 388
A R+ GG + TL+ +L +DG G+E IIV TN + LDPALLRPG
Sbjct: 259 AVGRQRGAGVGGGHDEREQTLNQMLVEMDGFE---GNEGIIVIAATNRPDVLDPALLRPG 315
Query: 389 RMDMHI 394
R D +
Sbjct: 316 RFDRQV 321
Score = 89 (36.4 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 208 TFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANY 267
TF +A + K + E +D ++R ++++G G L+ GPPGTGK+ L A+A
Sbjct: 154 TFSDVAGCDEAKEDVKELVD-YLRDPSRFQKLGGKIPTGVLMVGPPGTGKTLLAKAIAGE 212
Query: 268 LKFDVFDL 275
K F +
Sbjct: 213 AKVPFFTI 220
>POMBASE|SPBC4.07c [details] [associations]
symbol:rpt2 "19S proteasome regulatory subunit Rpt2"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC4.07c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0007346
GO:GO:0043161 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016887
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03062 OMA:FIRNQER EMBL:Z29366 PIR:S39348
RefSeq:NP_595480.1 ProteinModelPortal:P36612 IntAct:P36612
STRING:P36612 PRIDE:P36612 EnsemblFungi:SPBC4.07c.1 GeneID:2540939
KEGG:spo:SPBC4.07c OrthoDB:EOG4FN7S6 NextBio:20802054
Uniprot:P36612
Length = 448
Score = 96 (38.9 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 340 AGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
+G + + T+ LLN +DG +S D ++I+ TN LDPAL+RPGR+D I
Sbjct: 305 SGAEREIQRTMLELLNQLDGFDTSQRDIKVIM-ATNRISDLDPALIRPGRIDRKI 358
Score = 87 (35.7 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 24/76 (31%), Positives = 39/76 (51%)
Query: 191 PDYDAIRWDSVKLEHPATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLY 250
P + ++ D E A D +E ++ I E ++ + E Y+ +G +G +LY
Sbjct: 175 PMINVMKLDKAPTESYA--DIGGLESQIQE-IKEAVELPLTHPELYEEMGIKPPKGVILY 231
Query: 251 GPPGTGKSSLVAAMAN 266
G PGTGK+ L A+AN
Sbjct: 232 GAPGTGKTLLAKAVAN 247
>GENEDB_PFALCIPARUM|PFL1925w [details] [associations]
symbol:PFL1925w "cell division protein FtsH,
putative" species:5833 "Plasmodium falciparum" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 141 (54.7 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 52/191 (27%), Positives = 90/191 (47%)
Query: 206 PATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMA 265
P F+ +A + K ++E +D F++ +E Y +G +G LL GPPG+GK+ L A+A
Sbjct: 145 PIRFEEIAGIDESKLELLEVVD-FIKNREKYHEMGARMPKGVLLVGPPGSGKTMLARAVA 203
Query: 266 NYLKFDVFDLQLGNVTRDSDLRTLLLSTGNRSILVIEDIDCSVDLPDRRNGNENNADAQS 325
T + + + G + I + SV P +E +A
Sbjct: 204 TEANVPYI------YTSGPEFIEIYVGQGAKRIRQLFAHARSV-APSIVFIDEIDAIGGK 256
Query: 326 KAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALL 385
+++G+ N G+ +H TL+ LL +DG ++ +++ TN + LD ALL
Sbjct: 257 RSSGSV---N----GAGQREHDQTLNQLLVEMDGFSNTV--HIMVIGATNRIDTLDSALL 307
Query: 386 RPGRMDMHIHM 396
RPGR D +++
Sbjct: 308 RPGRFDRIVYV 318
>UNIPROTKB|Q8I526 [details] [associations]
symbol:PFL1925w "Cell division protein FtsH, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 141 (54.7 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 52/191 (27%), Positives = 90/191 (47%)
Query: 206 PATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMA 265
P F+ +A + K ++E +D F++ +E Y +G +G LL GPPG+GK+ L A+A
Sbjct: 145 PIRFEEIAGIDESKLELLEVVD-FIKNREKYHEMGARMPKGVLLVGPPGSGKTMLARAVA 203
Query: 266 NYLKFDVFDLQLGNVTRDSDLRTLLLSTGNRSILVIEDIDCSVDLPDRRNGNENNADAQS 325
T + + + G + I + SV P +E +A
Sbjct: 204 TEANVPYI------YTSGPEFIEIYVGQGAKRIRQLFAHARSV-APSIVFIDEIDAIGGK 256
Query: 326 KAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALL 385
+++G+ N G+ +H TL+ LL +DG ++ +++ TN + LD ALL
Sbjct: 257 RSSGSV---N----GAGQREHDQTLNQLLVEMDGFSNTV--HIMVIGATNRIDTLDSALL 307
Query: 386 RPGRMDMHIHM 396
RPGR D +++
Sbjct: 308 RPGRFDRIVYV 318
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 100 (40.3 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 27/87 (31%), Positives = 51/87 (58%)
Query: 185 YTLHRV-PDYDAIRWDSVKLEH-P-ATFDTLA-MEPDLKATIMEDLDRFVRRKEFYKRVG 240
Y LH++ P +K+E P +T++ + ++ +K + E ++ V+ E ++ +G
Sbjct: 151 YKLHKILPSKVDPLVSLMKVEKVPDSTYEMVGGLDQQVKE-VKEVIELPVKHPEIFESLG 209
Query: 241 RAWKRGYLLYGPPGTGKSSLVAAMANY 267
+ +G LLYGPPGTGK+ L A+A++
Sbjct: 210 ISQPKGVLLYGPPGTGKTLLARAVAHH 236
Score = 82 (33.9 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 342 GKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
G + T+ LLN +DG S+ + ++ TN + LD ALLRPGR+D I
Sbjct: 294 GDSEVQRTMMELLNQLDGFESTQNIK--VIMCTNRIDILDEALLRPGRIDRKI 344
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 100 (40.3 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 27/87 (31%), Positives = 51/87 (58%)
Query: 185 YTLHRV-PDYDAIRWDSVKLEH-P-ATFDTLA-MEPDLKATIMEDLDRFVRRKEFYKRVG 240
Y LH++ P +K+E P +T++ + ++ +K + E ++ V+ E ++ +G
Sbjct: 151 YKLHKILPSKVDPLVSLMKVEKVPDSTYEMVGGLDQQVKE-VKEVIELPVKHPEIFESLG 209
Query: 241 RAWKRGYLLYGPPGTGKSSLVAAMANY 267
+ +G LLYGPPGTGK+ L A+A++
Sbjct: 210 ISQPKGVLLYGPPGTGKTLLARAVAHH 236
Score = 82 (33.9 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 342 GKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
G + T+ LLN +DG S+ + ++ TN + LD ALLRPGR+D I
Sbjct: 294 GDSEVQRTMMELLNQLDGFESTQNIK--VIMCTNRIDILDEALLRPGRIDRKI 344
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 102 (41.0 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 32/105 (30%), Positives = 50/105 (47%)
Query: 220 ATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLGN 279
A I E ++ +R + +K +G RG L+YGPPGTGK+ + A+AN F +
Sbjct: 224 AQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVANETGAFFFLINGPE 283
Query: 280 VTR------DSDLRTLLLSTGNRS--ILVIEDIDCSVDLPDRRNG 316
V +S+LR + I+ I++ID D+ NG
Sbjct: 284 VMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKRDKTNG 328
Score = 93 (37.8 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 208 TFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMA 265
T+D + ++K + E ++ V + Y + G + +G L YGPPGTGK+ L A+A
Sbjct: 485 TWDDVGGLDEIKEELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKAVA 542
Score = 86 (35.3 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 21/67 (31%), Positives = 36/67 (53%)
Query: 330 AAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGR 389
A R AGG ++ + LL +DG+ + ++ TN +++DPA+LRPGR
Sbjct: 593 AKARGGSLGDAGGASDRVV--NQLLTEMDGM--NAKKNVFVIGATNRPDQIDPAILRPGR 648
Query: 390 MDMHIHM 396
+D I++
Sbjct: 649 LDQLIYV 655
Score = 71 (30.1 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 18/59 (30%), Positives = 29/59 (49%)
Query: 336 KTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
K D G+ + + +S LL +DG+ +++ TN +DPAL R GR D +
Sbjct: 322 KRDKTNGEVERRV-VSQLLTLMDGM--KARSNVVVIAATNRPNSIDPALRRFGRFDREV 377
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 95 (38.5 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 197 RWDSVKLEHPATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTG 256
R D +L+ D + + A I E ++ +R + +K +G +G LLYGPPG+G
Sbjct: 196 REDEERLDEVGYDDVGGVRKQM-AQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSG 254
Query: 257 KSSLVAAMAN 266
K+ + A+AN
Sbjct: 255 KTLIARAVAN 264
Score = 93 (37.8 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 25/67 (37%), Positives = 36/67 (53%)
Query: 330 AAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGR 389
A R N AGG +L + LL +DG+ + I+ TN + +DPALLRPGR
Sbjct: 587 ATQRGNSVGDAGGAADRVL--NQLLTEMDGM--NAKKTVFIIGATNRPDIIDPALLRPGR 642
Query: 390 MDMHIHM 396
+D I++
Sbjct: 643 LDQLIYI 649
Score = 93 (37.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 23/72 (31%), Positives = 40/72 (55%)
Query: 195 AIRWDSVKLEHPATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPG 254
A+R V++ + + D +E ++K + E + V E +++ G + +G L YGPPG
Sbjct: 467 ALRETVVEVPNVSWEDIGGLE-NVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPG 525
Query: 255 TGKSSLVAAMAN 266
GK+ L A+AN
Sbjct: 526 CGKTLLAKAIAN 537
>CGD|CAL0005689 [details] [associations]
symbol:RPT1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005689 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000078 EMBL:AACQ01000077
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
RefSeq:XP_715876.1 RefSeq:XP_715926.1 ProteinModelPortal:Q5A2A0
STRING:Q5A2A0 GeneID:3642412 GeneID:3642461 KEGG:cal:CaO19.441
KEGG:cal:CaO19.8071 Uniprot:Q5A2A0
Length = 444
Score = 103 (41.3 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 338 DFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMS 397
D AGG + T+ L+ +DG + G+ +++ F TN LDPALLRPGR+D + S
Sbjct: 298 DGAGGDNEVQRTMLELITQLDG-FDPRGNIKVM-FATNRPNTLDPALLRPGRIDRKVEFS 355
Score = 78 (32.5 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 234 EFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
E + ++G +G LLYGPPGTGK+ A+AN
Sbjct: 210 ERFVKLGIDPPKGILLYGPPGTGKTLCARAVAN 242
>UNIPROTKB|E1C4V5 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
EMBL:AADN02036894 EMBL:AADN02036895 IPI:IPI00602342
Ensembl:ENSGALT00000013403 ArrayExpress:E1C4V5 Uniprot:E1C4V5
Length = 424
Score = 107 (42.7 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 338 DFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMS 397
D AGG + T+ L+N +DG + G+ ++++ TN + LDPAL+RPGR+D I S
Sbjct: 278 DGAGGDNEVQRTMLELINQLDG-FDPRGNIKVLM-ATNRPDTLDPALMRPGRLDRKIEFS 335
Score = 73 (30.8 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 234 EFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
E + +G +G LL+GPPGTGK+ A+AN
Sbjct: 190 ERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 222
>UNIPROTKB|F1NFL8 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 OMA:DIRWELI
GeneTree:ENSGT00550000074978 EMBL:AADN02036894 EMBL:AADN02036895
IPI:IPI00821647 Ensembl:ENSGALT00000039595 ArrayExpress:F1NFL8
Uniprot:F1NFL8
Length = 432
Score = 107 (42.7 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 338 DFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMS 397
D AGG + T+ L+N +DG + G+ ++++ TN + LDPAL+RPGR+D I S
Sbjct: 286 DGAGGDNEVQRTMLELINQLDG-FDPRGNIKVLM-ATNRPDTLDPALMRPGRLDRKIEFS 343
Score = 73 (30.8 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 234 EFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
E + +G +G LL+GPPGTGK+ A+AN
Sbjct: 198 ERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 230
>UNIPROTKB|Q5E9F9 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9913 "Bos taurus" [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 HSSP:Q9WZ49 GO:GO:0000932 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 KO:K03061 OMA:DIRWELI
EMBL:BT020961 EMBL:BC102391 IPI:IPI00693210 RefSeq:NP_001015639.1
UniGene:Bt.24017 ProteinModelPortal:Q5E9F9 SMR:Q5E9F9 PRIDE:Q5E9F9
Ensembl:ENSBTAT00000065774 GeneID:530186 KEGG:bta:530186 CTD:5701
GeneTree:ENSGT00550000074978 OrthoDB:EOG4RXZ05 NextBio:20875201
Uniprot:Q5E9F9
Length = 433
Score = 107 (42.7 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 338 DFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMS 397
D AGG + T+ L+N +DG + G+ ++++ TN + LDPAL+RPGR+D I S
Sbjct: 287 DGAGGDNEVQRTMLELINQLDG-FDPRGNIKVLM-ATNRPDTLDPALMRPGRLDRKIEFS 344
Score = 73 (30.8 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 234 EFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
E + +G +G LL+GPPGTGK+ A+AN
Sbjct: 199 ERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 231
>UNIPROTKB|F1PPH7 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 KO:K03061
OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978 EMBL:AAEX03011248
RefSeq:XP_533103.3 ProteinModelPortal:F1PPH7
Ensembl:ENSCAFT00000006754 GeneID:475896 KEGG:cfa:475896
Uniprot:F1PPH7
Length = 433
Score = 107 (42.7 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 338 DFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMS 397
D AGG + T+ L+N +DG + G+ ++++ TN + LDPAL+RPGR+D I S
Sbjct: 287 DGAGGDNEVQRTMLELINQLDG-FDPRGNIKVLM-ATNRPDTLDPALMRPGRLDRKIEFS 344
Score = 73 (30.8 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 234 EFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
E + +G +G LL+GPPGTGK+ A+AN
Sbjct: 199 ERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 231
>UNIPROTKB|P35998 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0016887
GO:GO:0051436 GO:GO:0000932 EMBL:CH471070 GO:GO:0000216
GO:GO:0000209 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
EMBL:CH236947 GO:GO:0006521 Reactome:REACT_383 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI CTD:5701 EMBL:D11094
EMBL:AB075520 EMBL:BC002589 IPI:IPI00021435 PIR:S24353
RefSeq:NP_001191382.1 RefSeq:NP_002794.1 UniGene:Hs.437366
ProteinModelPortal:P35998 SMR:P35998 DIP:DIP-27554N IntAct:P35998
MINT:MINT-1163662 STRING:P35998 PhosphoSite:P35998 DMDM:547930
OGP:P35998 REPRODUCTION-2DPAGE:IPI00021435
REPRODUCTION-2DPAGE:P35998 PaxDb:P35998 PeptideAtlas:P35998
PRIDE:P35998 DNASU:5701 Ensembl:ENST00000292644
Ensembl:ENST00000435765 GeneID:5701 KEGG:hsa:5701 UCSC:uc003vbs.3
GeneCards:GC07P102984 HGNC:HGNC:9548 HPA:HPA019238 MIM:154365
neXtProt:NX_P35998 PharmGKB:PA33893 InParanoid:P35998
PhylomeDB:P35998 ChiTaRS:PSMC2 GenomeRNAi:5701 NextBio:22150
ArrayExpress:P35998 Bgee:P35998 CleanEx:HS_PSMC2
Genevestigator:P35998 GermOnline:ENSG00000161057 Uniprot:P35998
Length = 433
Score = 107 (42.7 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 338 DFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMS 397
D AGG + T+ L+N +DG + G+ ++++ TN + LDPAL+RPGR+D I S
Sbjct: 287 DGAGGDNEVQRTMLELINQLDG-FDPRGNIKVLM-ATNRPDTLDPALMRPGRLDRKIEFS 344
Score = 73 (30.8 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 234 EFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
E + +G +G LL+GPPGTGK+ A+AN
Sbjct: 199 ERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 231
>UNIPROTKB|P46472 [details] [associations]
symbol:psmc2 "26S protease regulatory subunit 7"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:X80157 EMBL:BC054143 PIR:S53709
RefSeq:NP_001084136.1 UniGene:Xl.57157 ProteinModelPortal:P46472
GeneID:399327 KEGG:xla:399327 Xenbase:XB-GENE-1000023
Uniprot:P46472
Length = 433
Score = 107 (42.7 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 338 DFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMS 397
D AGG + T+ L+N +DG + G+ ++++ TN + LDPAL+RPGR+D I S
Sbjct: 287 DGAGGDNEVQRTMLELINQLDG-FDPRGNIKVLM-ATNRPDTLDPALMRPGRLDRKIEFS 344
Score = 73 (30.8 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 234 EFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
E + +G +G LL+GPPGTGK+ A+AN
Sbjct: 199 ERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 231
>UNIPROTKB|Q4R4R0 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9541 "Macaca fascicularis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q9WZ49
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
EMBL:AB169834 ProteinModelPortal:Q4R4R0 SMR:Q4R4R0 PRIDE:Q4R4R0
Uniprot:Q4R4R0
Length = 433
Score = 107 (42.7 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 338 DFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMS 397
D AGG + T+ L+N +DG + G+ ++++ TN + LDPAL+RPGR+D I S
Sbjct: 287 DGAGGDNEVQRTMLELINQLDG-FDPRGNIKVLM-ATNRPDTLDPALMRPGRLDRKIEFS 344
Score = 73 (30.8 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 234 EFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
E + +G +G LL+GPPGTGK+ A+AN
Sbjct: 199 ERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 231
>UNIPROTKB|Q5R8D7 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9601 "Pongo abelii" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:CR859816 RefSeq:NP_001126144.1
UniGene:Pab.13078 ProteinModelPortal:Q5R8D7 PRIDE:Q5R8D7
GeneID:100173102 KEGG:pon:100173102 InParanoid:Q5R8D7
Uniprot:Q5R8D7
Length = 433
Score = 107 (42.7 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 338 DFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMS 397
D AGG + T+ L+N +DG + G+ ++++ TN + LDPAL+RPGR+D I S
Sbjct: 287 DGAGGDNEVQRTMLELINQLDG-FDPRGNIKVLM-ATNRPDTLDPALMRPGRLDRKIEFS 344
Score = 73 (30.8 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 234 EFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
E + +G +G LL+GPPGTGK+ A+AN
Sbjct: 199 ERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 231
>MGI|MGI:109555 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit,
ATPase 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0017025 "TBP-class protein binding"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:109555 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
OrthoDB:EOG4RXZ05 ChiTaRS:PSMC2 EMBL:AK005083 EMBL:AK168548
EMBL:BC005462 EMBL:U61283 IPI:IPI00270326 PIR:S39349
UniGene:Mm.2462 ProteinModelPortal:P46471 SMR:P46471 IntAct:P46471
STRING:P46471 PhosphoSite:P46471 REPRODUCTION-2DPAGE:P46471
SWISS-2DPAGE:P46471 PaxDb:P46471 PRIDE:P46471 InParanoid:P46471
Bgee:P46471 Genevestigator:P46471 GermOnline:ENSMUSG00000028932
Uniprot:P46471
Length = 433
Score = 107 (42.7 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 338 DFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMS 397
D AGG + T+ L+N +DG + G+ ++++ TN + LDPAL+RPGR+D I S
Sbjct: 287 DGAGGDNEVQRTMLELINQLDG-FDPRGNIKVLM-ATNRPDTLDPALMRPGRLDRKIEFS 344
Score = 73 (30.8 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 234 EFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
E + +G +G LL+GPPGTGK+ A+AN
Sbjct: 199 ERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 231
>RGD|3428 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit, ATPase
2" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA;ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03061
CTD:5701 OrthoDB:EOG4RXZ05 EMBL:D50694 EMBL:BC061542 EMBL:U13895
IPI:IPI00421600 RefSeq:NP_150239.1 UniGene:Rn.1202
ProteinModelPortal:Q63347 IntAct:Q63347 MINT:MINT-1794034
STRING:Q63347 PhosphoSite:Q63347 PRIDE:Q63347 GeneID:25581
KEGG:rno:25581 InParanoid:Q63347 NextBio:607227 Genevestigator:Q63347
GermOnline:ENSRNOG00000012026 Uniprot:Q63347
Length = 433
Score = 107 (42.7 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 338 DFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMS 397
D AGG + T+ L+N +DG + G+ ++++ TN + LDPAL+RPGR+D I S
Sbjct: 287 DGAGGDNEVQRTMLELINQLDG-FDPRGNIKVLM-ATNRPDTLDPALMRPGRLDRKIEFS 344
Score = 73 (30.8 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 234 EFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
E + +G +G LL+GPPGTGK+ A+AN
Sbjct: 199 ERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 231
>UNIPROTKB|Q63347 [details] [associations]
symbol:Psmc2 "26S protease regulatory subunit 7"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 CTD:5701 OrthoDB:EOG4RXZ05
EMBL:D50694 EMBL:BC061542 EMBL:U13895 IPI:IPI00421600
RefSeq:NP_150239.1 UniGene:Rn.1202 ProteinModelPortal:Q63347
IntAct:Q63347 MINT:MINT-1794034 STRING:Q63347 PhosphoSite:Q63347
PRIDE:Q63347 GeneID:25581 KEGG:rno:25581 InParanoid:Q63347
NextBio:607227 Genevestigator:Q63347 GermOnline:ENSRNOG00000012026
Uniprot:Q63347
Length = 433
Score = 107 (42.7 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 338 DFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMS 397
D AGG + T+ L+N +DG + G+ ++++ TN + LDPAL+RPGR+D I S
Sbjct: 287 DGAGGDNEVQRTMLELINQLDG-FDPRGNIKVLM-ATNRPDTLDPALMRPGRLDRKIEFS 344
Score = 73 (30.8 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 234 EFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
E + +G +G LL+GPPGTGK+ A+AN
Sbjct: 199 ERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 231
>ZFIN|ZDB-GENE-040426-1327 [details] [associations]
symbol:psmc2 "proteasome (prosome, macropain) 26S
subunit, ATPase 2" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040426-1327 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03061 OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978
OrthoDB:EOG4RXZ05 HSSP:Q9LCZ4 EMBL:BX571796 EMBL:BC053187
IPI:IPI00491385 RefSeq:NP_957260.1 UniGene:Dr.75589 STRING:Q7T3B1
Ensembl:ENSDART00000019647 GeneID:393941 KEGG:dre:393941
InParanoid:Q7T3B1 NextBio:20814913 Uniprot:Q7T3B1
Length = 433
Score = 107 (42.7 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 338 DFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMS 397
D AGG + T+ L+N +DG + G+ ++++ TN + LDPAL+RPGR+D I S
Sbjct: 287 DGAGGDNEVQRTMLELINQLDG-FDPRGNIKVLM-ATNRPDTLDPALMRPGRLDRKIEFS 344
Score = 73 (30.8 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 234 EFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
E + +G +G LL+GPPGTGK+ A+AN
Sbjct: 199 ERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 231
>UNIPROTKB|I3LJ30 [details] [associations]
symbol:I3LJ30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
Ensembl:ENSSSCT00000030050 OMA:WDLAYEN Uniprot:I3LJ30
Length = 434
Score = 107 (42.7 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 338 DFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMS 397
D AGG + T+ L+N +DG + G+ ++++ TN + LDPAL+RPGR+D I S
Sbjct: 288 DGAGGDNEVQRTMLELINQLDG-FDPRGNIKVLM-ATNRPDTLDPALMRPGRLDRKIEFS 345
Score = 73 (30.8 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 234 EFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
E + +G +G LL+GPPGTGK+ A+AN
Sbjct: 200 ERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 232
>TAIR|locus:2157637 [details] [associations]
symbol:VAR1 "VARIEGATED 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA;IDA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=RCA;TAS] [GO:0009579 "thylakoid" evidence=IDA] [GO:0010205
"photoinhibition" evidence=IMP] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
[GO:0009773 "photosynthetic electron transport in photosystem I"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0007275 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0006508 GO:GO:0009941
GO:GO:0004222 GO:GO:0016887 EMBL:AB023032 GO:GO:0010205
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0009535
HOGENOM:HOG000217276 KO:K03798 ProtClustDB:CLSN2688633
GO:GO:0010304 EMBL:AY126987 IPI:IPI00517420 RefSeq:NP_568604.1
UniGene:At.21670 UniGene:At.66720 ProteinModelPortal:Q9FH02
SMR:Q9FH02 STRING:Q9FH02 MEROPS:M41.024 PaxDb:Q9FH02 PRIDE:Q9FH02
EnsemblPlants:AT5G42270.1 GeneID:834232 KEGG:ath:AT5G42270
GeneFarm:4746 TAIR:At5g42270 InParanoid:Q9FH02 OMA:RARASMP
PhylomeDB:Q9FH02 Genevestigator:Q9FH02 GermOnline:AT5G42270
Uniprot:Q9FH02
Length = 704
Score = 93 (37.8 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 23/62 (37%), Positives = 33/62 (53%)
Query: 204 EHPATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAA 263
E TF +A K + E +D F++ + Y +G +G LL GPPGTGK+ L A
Sbjct: 244 ETGVTFGDVAGADQAKLELQEVVD-FLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARA 302
Query: 264 MA 265
+A
Sbjct: 303 VA 304
Score = 93 (37.8 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 23/65 (35%), Positives = 33/65 (50%)
Query: 330 AAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGR 389
A R+ GG + T++ LL +DG + G I++ TN + LD ALLRPGR
Sbjct: 353 AVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGV--IVLAATNRPDVLDSALLRPGR 410
Query: 390 MDMHI 394
D +
Sbjct: 411 FDRQV 415
>ZFIN|ZDB-GENE-060312-22 [details] [associations]
symbol:zgc:136908 "zgc:136908" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
Length = 805
Score = 97 (39.2 bits), Expect = 8.5e-06, Sum P(3) = 8.5e-06
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 220 ATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
A I E ++ +R +K +G RG LLYGPPGTGK+ + A+AN
Sbjct: 216 AQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLVARAVAN 262
Score = 87 (35.7 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 22/72 (30%), Positives = 37/72 (51%)
Query: 195 AIRWDSVKLEHPATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPG 254
A+R V++ H ++ + ++K + E + V + + + G RG L YGPPG
Sbjct: 465 ALRETVVEVPH-VNWEDIGGLDEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPG 523
Query: 255 TGKSSLVAAMAN 266
GK+ L A+AN
Sbjct: 524 CGKTLLAKAIAN 535
Score = 81 (33.6 bits), Expect = 8.5e-06, Sum P(3) = 8.5e-06
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 340 AGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHM 396
AGG ++ + +L +DG+ + I+ TN + +DPA+LRPGR+D I++
Sbjct: 595 AGGAADRVI--NQILTEMDGMTNK--KNVFIIGATNRPDIIDPAILRPGRLDQLIYI 647
Score = 51 (23.0 bits), Expect = 8.5e-06, Sum P(3) = 8.5e-06
Identities = 21/81 (25%), Positives = 40/81 (49%)
Query: 258 SSLVAAMANYLKFDVFDLQLGNVTRDSDLRTLLLSTGNRSILVIEDIDCS-VDLPDRRNG 316
+S+ AA+ + +FD ++ +G DS R +L +++ + ED+D + +
Sbjct: 353 NSVDAALRRFGRFDR-EIDIG--IPDSTGRLEILQIHTKNMKLSEDVDLEQISAETHGHV 409
Query: 317 NENNADAQSKAAGAAVRKNKT 337
+ A S+AA A+RK T
Sbjct: 410 GADLAALCSEAALQAIRKKMT 430
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 99 (39.9 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 31/105 (29%), Positives = 50/105 (47%)
Query: 220 ATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLGN 279
A I E ++ +R + +K +G RG L+YGPPGTGK+ + A+AN F +
Sbjct: 234 AQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPE 293
Query: 280 VTR------DSDLRTLLLSTGNRS--ILVIEDIDCSVDLPDRRNG 316
+ +S+LR S I+ I++ID ++ NG
Sbjct: 294 IMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTNG 338
Score = 88 (36.0 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 21/66 (31%), Positives = 37/66 (56%)
Query: 331 AVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRM 390
++ K + AG G ++ LL +DG+ S ++ TN +++DPAL+RPGR+
Sbjct: 601 SIAKARGASAGDSGGGDRVVNQLLTEMDGVNSK--KNVFVIGATNRPDQIDPALMRPGRL 658
Query: 391 DMHIHM 396
D I++
Sbjct: 659 DQLIYV 664
Score = 88 (36.0 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 195 AIRWDSVKLEHPATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPG 254
A+R V++ + D +E ++K + E + V E + R G +G L +GPPG
Sbjct: 483 ALRETVVEVPNVRWEDIGGLE-EVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPG 541
Query: 255 TGKSSLVAAMAN 266
TGK+ L A+AN
Sbjct: 542 TGKTLLAKAIAN 553
Score = 72 (30.4 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 21/73 (28%), Positives = 36/73 (49%)
Query: 331 AVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRM 390
A ++ KT+ G+ + + +S LL +DG+ +++ TN +DPAL R GR
Sbjct: 330 APKREKTN---GEVERRV-VSQLLTLMDGM--KARSNVVVMAATNRPNSIDPALRRFGRF 383
Query: 391 DMHIHMSYCGPYG 403
D + + P G
Sbjct: 384 DREVDVGIPDPTG 396
>FB|FBgn0028686 [details] [associations]
symbol:Rpt3 "Regulatory particle triple-A ATPase 3"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0005838 "proteasome regulatory particle"
evidence=ISS;IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:AE014298 GO:GO:0006508
GO:GO:0006974 GO:GO:0016887 GO:GO:0004175 GO:GO:0001673
GO:GO:0030163 HSSP:Q01853 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0008540 BRENDA:3.4.25.1 KO:K03063 OMA:DQTTNVK
GeneTree:ENSGT00550000074962 EMBL:AF145306 EMBL:BT046144
EMBL:FN544098 EMBL:FN544099 EMBL:FN544100 EMBL:FN544101
EMBL:FN544102 EMBL:FN544103 EMBL:FN544104 EMBL:FN544105
EMBL:FN544106 EMBL:FN544108 RefSeq:NP_572686.1 UniGene:Dm.8238
SMR:Q9V405 STRING:Q9V405 EnsemblMetazoa:FBtr0073436 GeneID:32047
KEGG:dme:Dmel_CG16916 UCSC:CG16916-RA CTD:32047 FlyBase:FBgn0028686
InParanoid:Q9V405 OrthoDB:EOG4P5HRH GenomeRNAi:32047 NextBio:776548
Uniprot:Q9V405
Length = 413
Score = 94 (38.1 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 219 KATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANY 267
K I E ++ + E YK++G RG L+YGPPG GK+ L A+A++
Sbjct: 169 KQEIREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHH 217
Score = 86 (35.3 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 353 LLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
LLN +DG + + ++ TN + LDPALLRPGR+D I
Sbjct: 287 LLNQMDGFDQTTNVK--VIMATNRADTLDPALLRPGRLDRKI 326
>WB|WBGene00010842 [details] [associations]
symbol:ymel-1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 EMBL:Z49128 PIR:T23690
RefSeq:NP_499298.2 ProteinModelPortal:P54813 SMR:P54813
MEROPS:M41.A11 PaxDb:P54813 EnsemblMetazoa:M03C11.5.1
EnsemblMetazoa:M03C11.5.2 GeneID:176460 KEGG:cel:CELE_M03C11.5
UCSC:M03C11.5.1 CTD:176460 WormBase:M03C11.5
GeneTree:ENSGT00550000074836 InParanoid:P54813 OMA:KWNQYES
NextBio:892672 Uniprot:P54813
Length = 723
Score = 103 (41.3 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 29/91 (31%), Positives = 45/91 (49%)
Query: 208 TFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANY 267
TFD + + K + E +D +++ E Y R+G +G LL GPPGTGK+ L A+A
Sbjct: 246 TFDDVRGMDEAKLEVEEIVD-YLKDPEKYSRLGGRLPKGVLLVGPPGTGKTLLARAIAGE 304
Query: 268 LKFDVFDLQLGNVTRDSDLRTLLLSTGNRSI 298
+ F T S+ +L+ G R +
Sbjct: 305 AQVPFFH------TAGSEFDEVLVGQGARRV 329
Score = 82 (33.9 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 19/46 (41%), Positives = 29/46 (63%)
Query: 349 TLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
T++ LL+ +DG + G I++ TN + LD ALLRPGR D+ +
Sbjct: 368 TINQLLSEMDGFTRNEGI--IVIAATNRVDDLDKALLRPGRFDVRV 411
>UNIPROTKB|F1SB53 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
OMA:HIFTIHA EMBL:CU570825 Ensembl:ENSSSCT00000016802 Uniprot:F1SB53
Length = 475
Score = 107 (42.7 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 338 DFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMS 397
D AGG + T+ L+N +DG + G+ ++++ TN + LDPAL+RPGR+D I S
Sbjct: 329 DGAGGDNEVQRTMLELINQLDG-FDPRGNIKVLM-ATNRPDTLDPALMRPGRLDRKIEFS 386
Score = 73 (30.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 234 EFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
E + +G +G LL+GPPGTGK+ A+AN
Sbjct: 241 ERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 273
>CGD|CAL0005974 [details] [associations]
symbol:PEX6 species:5476 "Candida albicans" [GO:0006631
"fatty acid metabolic process" evidence=ISO] [GO:0006625 "protein
targeting to peroxisome" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0046982 "protein heterodimerization
activity" evidence=IEA;ISO] [GO:0016562 "protein import into
peroxisome matrix, receptor recycling" evidence=IEA;ISO]
[GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0005777 "peroxisome"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0001302
"replicative cell aging" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005974 GO:GO:0005829 GO:GO:0005524
GO:GO:0005777 GO:GO:0016887 GO:GO:0046982 eggNOG:COG0464
EMBL:AACQ01000094 EMBL:AACQ01000093 GO:GO:0016562 KO:K13339
RefSeq:XP_714932.1 RefSeq:XP_714995.1 ProteinModelPortal:Q59ZE6
STRING:Q59ZE6 GeneID:3643407 GeneID:3643436 KEGG:cal:CaO19.11057
KEGG:cal:CaO19.3573 Uniprot:Q59ZE6
Length = 1157
Score = 99 (39.9 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 40/115 (34%), Positives = 55/115 (47%)
Query: 330 AAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGR 389
A R N+ D +GG ++ S LL +DG+ S GD +V TN + LD ALLRPGR
Sbjct: 920 APKRGNQGD-SGGVMDRIV--SQLLAELDGMSSEGGDGVFVVGATNRPDLLDEALLRPGR 976
Query: 390 MDMHIHMSYCGPYGFRLLAANYLGITDCEHKLVAEIETLLKTI----NITPAQVA 440
D ++L YLGI+D + K +E L + N+ QVA
Sbjct: 977 FD-------------KML---YLGISDTDEKQTKILEALTRKFKLDDNVNLEQVA 1015
Score = 90 (36.7 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 19/59 (32%), Positives = 32/59 (54%)
Query: 218 LKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQ 276
+K I++ +D ++ E + G + G L YGPPGTGK+ L A+A + F ++
Sbjct: 823 VKDEILDTIDMPLKHPELFNN-GLKKRSGILFYGPPGTGKTLLAKAIATNFSLNFFSVK 880
Score = 44 (20.5 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 17/72 (23%), Positives = 34/72 (47%)
Query: 61 VIEDSNGIARNQIFEAAEAYLSAKIGPSIERLKICKTPNEKVITIRLEKNEQIIDSFRGV 120
+I D + + ++ + +A S K+ P E +T N K + ++L + FR +
Sbjct: 29 IINDPS-LDQHDTLDIGDALFS-KLFPKEEINSTTETVNNKYVLVKLLGAPDYFNKFRIM 86
Query: 121 QLRW-RFALVEA 131
+L R+ L E+
Sbjct: 87 KLNQVRYQLRES 98
>UNIPROTKB|Q59ZE6 [details] [associations]
symbol:PEX6 "Likely peroxisomal biogenesis AAA ATPase Pex6"
species:237561 "Candida albicans SC5314" [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0016562 "protein import into
peroxisome matrix, receptor recycling" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005974 GO:GO:0005829 GO:GO:0005524
GO:GO:0005777 GO:GO:0016887 GO:GO:0046982 eggNOG:COG0464
EMBL:AACQ01000094 EMBL:AACQ01000093 GO:GO:0016562 KO:K13339
RefSeq:XP_714932.1 RefSeq:XP_714995.1 ProteinModelPortal:Q59ZE6
STRING:Q59ZE6 GeneID:3643407 GeneID:3643436 KEGG:cal:CaO19.11057
KEGG:cal:CaO19.3573 Uniprot:Q59ZE6
Length = 1157
Score = 99 (39.9 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 40/115 (34%), Positives = 55/115 (47%)
Query: 330 AAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGR 389
A R N+ D +GG ++ S LL +DG+ S GD +V TN + LD ALLRPGR
Sbjct: 920 APKRGNQGD-SGGVMDRIV--SQLLAELDGMSSEGGDGVFVVGATNRPDLLDEALLRPGR 976
Query: 390 MDMHIHMSYCGPYGFRLLAANYLGITDCEHKLVAEIETLLKTI----NITPAQVA 440
D ++L YLGI+D + K +E L + N+ QVA
Sbjct: 977 FD-------------KML---YLGISDTDEKQTKILEALTRKFKLDDNVNLEQVA 1015
Score = 90 (36.7 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 19/59 (32%), Positives = 32/59 (54%)
Query: 218 LKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQ 276
+K I++ +D ++ E + G + G L YGPPGTGK+ L A+A + F ++
Sbjct: 823 VKDEILDTIDMPLKHPELFNN-GLKKRSGILFYGPPGTGKTLLAKAIATNFSLNFFSVK 880
Score = 44 (20.5 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 17/72 (23%), Positives = 34/72 (47%)
Query: 61 VIEDSNGIARNQIFEAAEAYLSAKIGPSIERLKICKTPNEKVITIRLEKNEQIIDSFRGV 120
+I D + + ++ + +A S K+ P E +T N K + ++L + FR +
Sbjct: 29 IINDPS-LDQHDTLDIGDALFS-KLFPKEEINSTTETVNNKYVLVKLLGAPDYFNKFRIM 86
Query: 121 QLRW-RFALVEA 131
+L R+ L E+
Sbjct: 87 KLNQVRYQLRES 98
>FB|FBgn0037742 [details] [associations]
symbol:Rpt3R "Regulatory particle triple-A ATPase 3-related"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 EMBL:AE014297 GO:GO:0005524
GO:GO:0005737 GO:GO:0006200 GO:GO:0006974 GO:GO:0016887
GO:GO:0030163 TIGRFAMs:TIGR01242 KO:K03063
GeneTree:ENSGT00550000074962 FlyBase:FBgn0037742 EMBL:BT016035
RefSeq:NP_649938.2 UniGene:Dm.21651 SMR:Q9VH79 STRING:Q9VH79
EnsemblMetazoa:FBtr0301536 EnsemblMetazoa:FBtr0332172 GeneID:41190
KEGG:dme:Dmel_CG9475 UCSC:CG9475-RA CTD:41190 InParanoid:Q9VH79
OMA:KQSNCLV OrthoDB:EOG49GHZ0 GenomeRNAi:41190 NextBio:822637
Uniprot:Q9VH79
Length = 405
Score = 91 (37.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 219 KATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANY 267
K I E ++ + + YK++G RG LL+GPPG GK+ L A+A++
Sbjct: 161 KQEIREAVELPLTHAQLYKQIGIDPPRGVLLFGPPGCGKTMLAKAVAHH 209
Score = 88 (36.0 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 353 LLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHM 396
LLN +DG + + ++ TN + LDPALLRPGR+D I +
Sbjct: 279 LLNQMDGFDETTNIK--VIMATNRADTLDPALLRPGRLDRKIEL 320
>UNIPROTKB|F1MG70 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 OMA:DQTTNVK
IPI:IPI00718026 GeneTree:ENSGT00550000074962 EMBL:DAAA02047067
Ensembl:ENSBTAT00000012391 ArrayExpress:F1MG70 Uniprot:F1MG70
Length = 417
Score = 93 (37.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 219 KATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANY 267
K + E ++ + E YK++G RG L+YGPPG GK+ L A+A++
Sbjct: 173 KQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHH 221
Score = 86 (35.3 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 353 LLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
LLN +DG + + ++ TN + LDPALLRPGR+D I
Sbjct: 291 LLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGRLDRKI 330
>ASPGD|ASPL0000034636 [details] [associations]
symbol:AN2917 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001306
EMBL:AACD01000051 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
OrthoDB:EOG4B01XN RefSeq:XP_660521.1 ProteinModelPortal:Q5B963
STRING:Q5B963 EnsemblFungi:CADANIAT00010170 GeneID:2874156
KEGG:ani:AN2917.2 Uniprot:Q5B963
Length = 443
Score = 104 (41.7 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 24/60 (40%), Positives = 36/60 (60%)
Query: 338 DFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMS 397
D AGG + T+ L+ +DG + + G+ +++ F TN LDPAL+RPGR+D I S
Sbjct: 297 DGAGGDNEVQRTMLELITQLDG-FDARGNIKVM-FATNRPSTLDPALMRPGRIDRKIEFS 354
Score = 75 (31.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 14/22 (63%), Positives = 17/22 (77%)
Query: 245 RGYLLYGPPGTGKSSLVAAMAN 266
+G LLYGPPGTGK+ A+AN
Sbjct: 220 KGALLYGPPGTGKTLCARAVAN 241
>UNIPROTKB|Q3T030 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 EMBL:BC102595 IPI:IPI00718026
RefSeq:NP_001030255.1 UniGene:Bt.48909 ProteinModelPortal:Q3T030
SMR:Q3T030 STRING:Q3T030 PRIDE:Q3T030 GeneID:510029 KEGG:bta:510029
CTD:5704 InParanoid:Q3T030 OrthoDB:EOG4KD6M4 NextBio:20869245
ArrayExpress:Q3T030 Uniprot:Q3T030
Length = 418
Score = 93 (37.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 219 KATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANY 267
K + E ++ + E YK++G RG L+YGPPG GK+ L A+A++
Sbjct: 174 KQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHH 222
Score = 86 (35.3 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 353 LLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
LLN +DG + + ++ TN + LDPALLRPGR+D I
Sbjct: 292 LLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGRLDRKI 331
>UNIPROTKB|E2RH48 [details] [associations]
symbol:PSMC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001824 "blastocyst development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 EMBL:AAEX03000950
RefSeq:XP_003638879.1 ProteinModelPortal:E2RH48 SMR:E2RH48
PRIDE:E2RH48 Ensembl:ENSCAFT00000008685 GeneID:100855613
KEGG:cfa:100855613 NextBio:20852115 Uniprot:E2RH48
Length = 418
Score = 93 (37.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 219 KATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANY 267
K + E ++ + E YK++G RG L+YGPPG GK+ L A+A++
Sbjct: 174 KQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHH 222
Score = 86 (35.3 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 353 LLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
LLN +DG + + ++ TN + LDPALLRPGR+D I
Sbjct: 292 LLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGRLDRKI 331
>UNIPROTKB|P43686 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0006508 "proteolysis" evidence=TAS] [GO:0016887
"ATPase activity" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006521 "regulation of cellular amino acid metabolic process"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0006977 "DNA damage response, signal transduction by p53 class
mediator resulting in cell cycle arrest" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006200 "ATP catabolic process" evidence=TAS]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0016887 GO:GO:0051436
GO:GO:0000216 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 GO:GO:0001824 Reactome:REACT_383
EMBL:AC007842 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 EMBL:AF038965 EMBL:U27515 EMBL:AF020736
EMBL:BT007232 EMBL:BC000343 EMBL:BC010396 EMBL:BC014488
IPI:IPI00020042 IPI:IPI00216770 RefSeq:NP_006494.1
RefSeq:NP_694546.1 UniGene:Hs.211594 PDB:2DVW PDBsum:2DVW
ProteinModelPortal:P43686 SMR:P43686 DIP:DIP-29274N IntAct:P43686
MINT:MINT-5004247 STRING:P43686 PhosphoSite:P43686 DMDM:20532409
OGP:P43686 PaxDb:P43686 PRIDE:P43686 DNASU:5704
Ensembl:ENST00000157812 Ensembl:ENST00000455878 GeneID:5704
KEGG:hsa:5704 UCSC:uc002omq.3 UCSC:uc002omr.3 GeneCards:GC19P040477
HGNC:HGNC:9551 HPA:HPA002044 HPA:HPA005471 MIM:602707
neXtProt:NX_P43686 PharmGKB:PA33896 InParanoid:P43686
PhylomeDB:P43686 ChiTaRS:PSMC4 EvolutionaryTrace:P43686
GenomeRNAi:5704 NextBio:22160 ArrayExpress:P43686 Bgee:P43686
CleanEx:HS_PSMC4 Genevestigator:P43686 GermOnline:ENSG00000013275
Uniprot:P43686
Length = 418
Score = 93 (37.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 219 KATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANY 267
K + E ++ + E YK++G RG L+YGPPG GK+ L A+A++
Sbjct: 174 KQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHH 222
Score = 86 (35.3 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 353 LLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
LLN +DG + + ++ TN + LDPALLRPGR+D I
Sbjct: 292 LLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGRLDRKI 331
>UNIPROTKB|Q4R7L3 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9541 "Macaca fascicularis" [GO:0022624 "proteasome
accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:AB168803
ProteinModelPortal:Q4R7L3 SMR:Q4R7L3 PRIDE:Q4R7L3 Uniprot:Q4R7L3
Length = 418
Score = 93 (37.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 219 KATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANY 267
K + E ++ + E YK++G RG L+YGPPG GK+ L A+A++
Sbjct: 174 KQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHH 222
Score = 86 (35.3 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 353 LLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
LLN +DG + + ++ TN + LDPALLRPGR+D I
Sbjct: 292 LLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGRLDRKI 331
>MGI|MGI:1346093 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1346093
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 EMBL:CH466593 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962 EMBL:L76223
EMBL:AB040869 EMBL:AK077507 EMBL:AK153991 EMBL:AK160718
EMBL:AK167041 EMBL:BC012708 IPI:IPI00108895 RefSeq:NP_036004.2
UniGene:Mm.29582 PDB:3AJI PDBsum:3AJI ProteinModelPortal:P54775
SMR:P54775 IntAct:P54775 STRING:P54775 PhosphoSite:P54775
REPRODUCTION-2DPAGE:P54775 PaxDb:P54775 PRIDE:P54775
Ensembl:ENSMUST00000032824 GeneID:23996 KEGG:mmu:23996
InParanoid:Q6ZWN9 EvolutionaryTrace:P54775 NextBio:303909
Bgee:P54775 Genevestigator:P54775 GermOnline:ENSMUSG00000030603
Uniprot:P54775
Length = 418
Score = 93 (37.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 219 KATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANY 267
K + E ++ + E YK++G RG L+YGPPG GK+ L A+A++
Sbjct: 174 KQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHH 222
Score = 86 (35.3 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 353 LLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
LLN +DG + + ++ TN + LDPALLRPGR+D I
Sbjct: 292 LLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGRLDRKI 331
>RGD|621102 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10116 "Rattus norvegicus" [GO:0001824
"blastocyst development" evidence=IEA;ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006200 "ATP catabolic process" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0022624 "proteasome
accessory complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621102 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 GO:GO:0001824 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK CTD:5704 OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962
EMBL:D50695 EMBL:BC063145 IPI:IPI00210158 RefSeq:NP_476463.1
UniGene:Rn.11341 PDB:2DWZ PDBsum:2DWZ ProteinModelPortal:Q63570
SMR:Q63570 IntAct:Q63570 STRING:Q63570 PhosphoSite:Q63570
PRIDE:Q63570 Ensembl:ENSRNOT00000025819 GeneID:117262
KEGG:rno:117262 UCSC:RGD:621102 InParanoid:Q63570
EvolutionaryTrace:Q63570 NextBio:620144 Genevestigator:Q63570
GermOnline:ENSRNOG00000018994 Uniprot:Q63570
Length = 418
Score = 93 (37.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 219 KATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANY 267
K + E ++ + E YK++G RG L+YGPPG GK+ L A+A++
Sbjct: 174 KQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHH 222
Score = 86 (35.3 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 353 LLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
LLN +DG + + ++ TN + LDPALLRPGR+D I
Sbjct: 292 LLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGRLDRKI 331
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 94 (38.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 24/51 (47%), Positives = 33/51 (64%)
Query: 349 TLSGLLNFIDGLWSSCGDERI-IVFTTNHKERLDPALLRPGRMDMHIHMSY 398
T+ LLN +DG +SS DERI ++ TN + LDPAL+R GR+D I +
Sbjct: 294 TMLELLNQLDG-FSS--DERIKVIAATNRADILDPALMRSGRLDRKIEFPH 341
Score = 85 (35.0 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 27/83 (32%), Positives = 46/83 (55%)
Query: 187 LHRVP-DYDAIRWDSVKLEHPATFDTLAMEPDLKATIMEDLDRFV---RRKEFYKRVGRA 242
L +P +YD+ R +++++ T D + L+ I E ++ V KE ++++G
Sbjct: 146 LDTLPSEYDS-RVKAMEVDEKPTEDYNDIG-GLEKQIQELVEAIVLPMTHKERFEKLGVR 203
Query: 243 WKRGYLLYGPPGTGKSSLVAAMA 265
+G LLYGPPGTGK+ + A A
Sbjct: 204 PPKGVLLYGPPGTGKTLMARACA 226
>WB|WBGene00004501 [details] [associations]
symbol:rpt-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0016887 GO:GO:0000502 GO:GO:0006511 EMBL:Z78012
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 PIR:T20152
RefSeq:NP_506005.1 ProteinModelPortal:Q18787 SMR:Q18787
IntAct:Q18787 MINT:MINT-212537 STRING:Q18787 PaxDb:Q18787
PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1 EnsemblMetazoa:C52E4.4.2
GeneID:179641 KEGG:cel:CELE_C52E4.4 UCSC:C52E4.4.1 CTD:179641
WormBase:C52E4.4 InParanoid:Q18787 NextBio:906264 Uniprot:Q18787
Length = 435
Score = 98 (39.6 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 338 DFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMS 397
D GG + T+ L+N +DG + G+ ++++ TN + LDPAL+RPGR+D + +
Sbjct: 289 DGQGGDNEVQRTMLELINQLDG-FDPRGNIKVLM-ATNRPDTLDPALMRPGRLDRKVEFA 346
Score = 81 (33.6 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 17/33 (51%), Positives = 21/33 (63%)
Query: 234 EFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
E Y +G +G LLYGPPGTGK+ A+AN
Sbjct: 201 ERYVNLGIEPPKGVLLYGPPGTGKTLCARAVAN 233
>UNIPROTKB|Q18787 [details] [associations]
symbol:rpt-1 "26S protease regulatory subunit 7"
species:6239 "Caenorhabditis elegans" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0016887 GO:GO:0000502
GO:GO:0006511 EMBL:Z78012 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
GeneTree:ENSGT00550000074978 PIR:T20152 RefSeq:NP_506005.1
ProteinModelPortal:Q18787 SMR:Q18787 IntAct:Q18787 MINT:MINT-212537
STRING:Q18787 PaxDb:Q18787 PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1
EnsemblMetazoa:C52E4.4.2 GeneID:179641 KEGG:cel:CELE_C52E4.4
UCSC:C52E4.4.1 CTD:179641 WormBase:C52E4.4 InParanoid:Q18787
NextBio:906264 Uniprot:Q18787
Length = 435
Score = 98 (39.6 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 338 DFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMS 397
D GG + T+ L+N +DG + G+ ++++ TN + LDPAL+RPGR+D + +
Sbjct: 289 DGQGGDNEVQRTMLELINQLDG-FDPRGNIKVLM-ATNRPDTLDPALMRPGRLDRKVEFA 346
Score = 81 (33.6 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 17/33 (51%), Positives = 21/33 (63%)
Query: 234 EFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
E Y +G +G LLYGPPGTGK+ A+AN
Sbjct: 201 ERYVNLGIEPPKGVLLYGPPGTGKTLCARAVAN 233
>FB|FBgn0024992 [details] [associations]
symbol:CG2658 species:7227 "Drosophila melanogaster"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 HSSP:Q9LCZ4
HOGENOM:HOG000226301 MEROPS:M41.A12 EMBL:AL023874
ProteinModelPortal:O76867 SMR:O76867 PaxDb:O76867 PRIDE:O76867
FlyBase:FBgn0024992 InParanoid:O76867 OrthoDB:EOG4V6WXK
ArrayExpress:O76867 Bgee:O76867 Uniprot:O76867
Length = 819
Score = 137 (53.3 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 58/195 (29%), Positives = 93/195 (47%)
Query: 209 FDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN-- 266
F +A + K + E +D +++ E Y+R+G RG LL GPPG GK+ L A+A
Sbjct: 340 FRDVAGLSEAKQEVKEFVD-YLKSPEKYQRLGAKVPRGALLLGPPGCGKTLLAKAVATEA 398
Query: 267 ---YLKFD--VFDLQLGNVTRDSDLRTLLLSTGNRS--ILVIEDIDCSVDLPDRRNGNEN 319
+L + F +G + + +R L R+ I+ I++ID + +R+G E+
Sbjct: 399 QVPFLSMNGSEFIEMIGGLGA-ARVRDLFKEGKKRAPCIIYIDEIDA---IGRQRSGTES 454
Query: 320 NADAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKER 379
G G+ TL+ LL +DG+ + G +++ +TN +
Sbjct: 455 MGQ------------------GSSGESEQTLNQLLVEMDGMATKEGV--LMLASTNRADI 494
Query: 380 LDPALLRPGRMDMHI 394
LD ALLRPGR D HI
Sbjct: 495 LDKALLRPGRFDRHI 509
>DICTYBASE|DDB_G0276917 [details] [associations]
symbol:psmC2 "26S proteasome ATPase 2 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0000502
"proteasome complex" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0276917 GO:GO:0005524 GO:GO:0005634 GO:GO:0045335
GenomeReviews:CM000151_GR GO:GO:0016887 GO:GO:0000502 GO:GO:0006511
HSSP:Q9WZ49 EMBL:AAFI02000019 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03061 RefSeq:XP_642830.1 ProteinModelPortal:Q86JA1
STRING:Q86JA1 PRIDE:Q86JA1 EnsemblProtists:DDB0232966
GeneID:8620693 KEGG:ddi:DDB_G0276917 OMA:HIFTIHA
ProtClustDB:CLSZ2429177 Uniprot:Q86JA1
Length = 428
Score = 104 (41.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 338 DFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
D AGG + T+ L+N +DG + G+ ++++ TN + LDPALLRPGR+D +
Sbjct: 282 DGAGGDNEVQRTMLELINQLDG-FDPRGNIKVLM-ATNRPDTLDPALLRPGRLDRKV 336
Score = 74 (31.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 13/22 (59%), Positives = 17/22 (77%)
Query: 245 RGYLLYGPPGTGKSSLVAAMAN 266
+G L+YGPPGTGK+ A+AN
Sbjct: 205 KGVLMYGPPGTGKTLCARAVAN 226
>SGD|S000001628 [details] [associations]
symbol:RPT1 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IMP] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IDA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IPI] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000001628 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:BK006944 GO:GO:0006511 GO:GO:0017111
GO:GO:0045899 GO:GO:0045732 PDB:3VLF PDB:4A3V PDBsum:3VLF
PDBsum:4A3V GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 OrthoDB:EOG4B01XN
EMBL:Z22817 EMBL:X73571 EMBL:Z28145 PIR:S34354 RefSeq:NP_012777.1
ProteinModelPortal:P33299 SMR:P33299 DIP:DIP-2883N IntAct:P33299
MINT:MINT-612502 STRING:P33299 SWISS-2DPAGE:P33299 PaxDb:P33299
PeptideAtlas:P33299 PRIDE:P33299 EnsemblFungi:YKL145W GeneID:853712
KEGG:sce:YKL145W CYGD:YKL145w NextBio:974719 Genevestigator:P33299
GermOnline:YKL145W Uniprot:P33299
Length = 467
Score = 103 (41.3 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 338 DFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMS 397
D AGG + T+ L+ +DG + G+ +++ F TN LDPALLRPGR+D + S
Sbjct: 321 DGAGGDNEVQRTMLELITQLDG-FDPRGNIKVM-FATNRPNTLDPALLRPGRIDRKVEFS 378
Score = 76 (31.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 14/22 (63%), Positives = 17/22 (77%)
Query: 245 RGYLLYGPPGTGKSSLVAAMAN 266
+G LLYGPPGTGK+ A+AN
Sbjct: 244 KGILLYGPPGTGKTLCARAVAN 265
>TAIR|locus:2094892 [details] [associations]
symbol:EMB2083 "embryo defective 2083" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0000023 "maltose metabolic process"
evidence=RCA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
SMART:SM00382 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AB023046
eggNOG:COG0465 GO:GO:0017111 IPI:IPI00526963 RefSeq:NP_566541.1
UniGene:At.38918 ProteinModelPortal:A8MPR5 SMR:A8MPR5 STRING:A8MPR5
PaxDb:A8MPR5 PRIDE:A8MPR5 EnsemblPlants:AT3G16290.1 GeneID:820876
KEGG:ath:AT3G16290 TAIR:At3g16290 HOGENOM:HOG000015086
InParanoid:A8MPR5 OMA:FFTHGEM PhylomeDB:A8MPR5
ProtClustDB:CLSN2688442 Genevestigator:A8MPR5 Uniprot:A8MPR5
Length = 876
Score = 93 (37.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 29/74 (39%), Positives = 39/74 (52%)
Query: 331 AVRKNKTDFAGGKGQHM-LTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGR 389
AV + + G GQ TL+ LL +DG + G E I + +TN + LDPAL+RPGR
Sbjct: 513 AVGRERGLIKGSGGQERDATLNQLLVSLDG-FEGRG-EVITIASTNRPDILDPALVRPGR 570
Query: 390 MDMHIHMSYCGPYG 403
D I + G G
Sbjct: 571 FDRKIFIPKPGLIG 584
Score = 93 (37.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 34/114 (29%), Positives = 50/114 (43%)
Query: 162 NSYLPHVIELAKDMKDKTRVLKMYTLHRVPDYDAIRWDSVKLEHPATFDTLAMEPDLKAT 221
N YL ++ MK RV + R+P+Y R VK A + +E
Sbjct: 373 NPYLQMAMQF---MKSGARVRRASN-KRLPEY-LERGVDVKFTDVAGLGKIRLE------ 421
Query: 222 IMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDL 275
+E++ +F E Y+R G G LL GPPG GK+ L A+A + F +
Sbjct: 422 -LEEIVKFFTHGEMYRRRGVKIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSI 474
>WB|WBGene00004503 [details] [associations]
symbol:rpt-3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK
EMBL:FO081210 PIR:A88485 RefSeq:NP_498429.1
ProteinModelPortal:P46502 SMR:P46502 DIP:DIP-24412N IntAct:P46502
MINT:MINT-212949 STRING:P46502 PaxDb:P46502
EnsemblMetazoa:F23F12.6.1 EnsemblMetazoa:F23F12.6.2 GeneID:175925
KEGG:cel:CELE_F23F12.6 UCSC:F23F12.6.1 CTD:175925 WormBase:F23F12.6
GeneTree:ENSGT00550000074962 InParanoid:P46502 NextBio:890338
Uniprot:P46502
Length = 414
Score = 91 (37.1 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 353 LLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
LLN +DG S + ++ TN ++ LDPALLRPGR+D I
Sbjct: 288 LLNQMDGFDQSTNVK--VIMATNRQDTLDPALLRPGRLDRKI 327
Score = 87 (35.7 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 219 KATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMA 265
K + E ++ + E Y+++G RG L+YGPPG GK+ L A+A
Sbjct: 170 KQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVA 216
>UNIPROTKB|E1C646 [details] [associations]
symbol:NSF "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR004201 Pfam:PF02933
SMART:SM01072 SMART:SM01073 GeneTree:ENSGT00530000064085
EMBL:AADN02053924 EMBL:AADN02053925 IPI:IPI00821151
Ensembl:ENSGALT00000040844 ArrayExpress:E1C646 Uniprot:E1C646
Length = 744
Score = 136 (52.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 51/211 (24%), Positives = 96/211 (45%)
Query: 234 EFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLGNVTRDSDLRTLLLST 293
E +++G +G LLYGPPG GK+ + + L + + V ++ +
Sbjct: 243 EIVEQMGCKHVKGILLYGPPGCGKTLMARQIGKML-----NAREPKVVNGPEILNKYVGE 297
Query: 294 GNRSILVIEDIDCSVDLPDRRNGNENNADAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGL 353
+I + + RR G + A+ K + AG G H ++ L
Sbjct: 298 SEANI---RKLFADAEEEQRRLGANSGVHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQL 354
Query: 354 LNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYCGPYG-FRLLAANYL 412
L+ IDG+ + +++ TN + +D ALLRPGR+++ + + G F++L + +
Sbjct: 355 LSKIDGVEQL--NNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRFQILHIHTV 412
Query: 413 GITDCEHKLVAE----IETLLKTINITPAQV 439
+ EH+L+AE E ++T N + A++
Sbjct: 413 RMR--EHQLLAEDVDIAELAVETKNFSGAEL 441
>UNIPROTKB|E1BQU4 [details] [associations]
symbol:NSF "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR004201 Pfam:PF02933
SMART:SM01072 SMART:SM01073 GeneTree:ENSGT00530000064085
EMBL:AADN02053924 EMBL:AADN02053925 IPI:IPI00589241
Ensembl:ENSGALT00000001581 ArrayExpress:E1BQU4 Uniprot:E1BQU4
Length = 745
Score = 136 (52.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 51/211 (24%), Positives = 96/211 (45%)
Query: 234 EFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLGNVTRDSDLRTLLLST 293
E +++G +G LLYGPPG GK+ + + L + + V ++ +
Sbjct: 243 EIVEQMGCKHVKGILLYGPPGCGKTLMARQIGKML-----NAREPKVVNGPEILNKYVGE 297
Query: 294 GNRSILVIEDIDCSVDLPDRRNGNENNADAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGL 353
+I + + RR G + A+ K + AG G H ++ L
Sbjct: 298 SEANI---RKLFADAEEEQRRLGANSGVHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQL 354
Query: 354 LNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYCGPYG-FRLLAANYL 412
L+ IDG+ + +++ TN + +D ALLRPGR+++ + + G F++L + +
Sbjct: 355 LSKIDGVEQL--NNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRFQILHIHTV 412
Query: 413 GITDCEHKLVAE----IETLLKTINITPAQV 439
+ EH+L+AE E ++T N + A++
Sbjct: 413 RMR--EHQLLAEDVDIAELAVETKNFSGAEL 441
>UNIPROTKB|E1C649 [details] [associations]
symbol:NSF "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0001921
"positive regulation of receptor recycling" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006813 "potassium ion transport" evidence=IEA]
[GO:0019905 "syntaxin binding" evidence=IEA] [GO:0030165 "PDZ
domain binding" evidence=IEA] [GO:0032403 "protein complex binding"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005886 GO:GO:0005524 GO:GO:0005737
GO:GO:0006813 GO:GO:0001921 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0042623 InterPro:IPR004201 Pfam:PF02933
SMART:SM01072 SMART:SM01073 GeneTree:ENSGT00530000064085
OMA:IFTLRTH EMBL:AADN02053924 EMBL:AADN02053925 IPI:IPI00823263
Ensembl:ENSGALT00000040841 ArrayExpress:E1C649 Uniprot:E1C649
Length = 747
Score = 136 (52.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 51/211 (24%), Positives = 96/211 (45%)
Query: 234 EFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLGNVTRDSDLRTLLLST 293
E +++G +G LLYGPPG GK+ + + L + + V ++ +
Sbjct: 243 EIVEQMGCKHVKGILLYGPPGCGKTLMARQIGKML-----NAREPKVVNGPEILNKYVGE 297
Query: 294 GNRSILVIEDIDCSVDLPDRRNGNENNADAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGL 353
+I + + RR G + A+ K + AG G H ++ L
Sbjct: 298 SEANI---RKLFADAEEEQRRLGANSGVHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQL 354
Query: 354 LNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYCGPYG-FRLLAANYL 412
L+ IDG+ + +++ TN + +D ALLRPGR+++ + + G F++L + +
Sbjct: 355 LSKIDGVEQL--NNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRFQILHIHTV 412
Query: 413 GITDCEHKLVAE----IETLLKTINITPAQV 439
+ EH+L+AE E ++T N + A++
Sbjct: 413 RMR--EHQLLAEDVDIAELAVETKNFSGAEL 441
>TAIR|locus:2007574 [details] [associations]
symbol:PEX6 "peroxin 6" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IMP]
[GO:0006635 "fatty acid beta-oxidation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524
GO:GO:0005737 GO:GO:0006635 GO:GO:0016558 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 EMBL:AC006550 TCDB:3.A.20.1.2
EMBL:AY333116 EMBL:AY078962 EMBL:BT001151 IPI:IPI00517292
PIR:F86160 RefSeq:NP_171799.2 UniGene:At.42567
ProteinModelPortal:Q8RY16 SMR:Q8RY16 STRING:Q8RY16 PaxDb:Q8RY16
PRIDE:Q8RY16 EnsemblPlants:AT1G03000.1 GeneID:839315
KEGG:ath:AT1G03000 GeneFarm:2442 TAIR:At1g03000
HOGENOM:HOG000241031 InParanoid:Q8RY16 KO:K13339 OMA:RRCFSHE
PhylomeDB:Q8RY16 ProtClustDB:CLSN2690380 Genevestigator:Q8RY16
Uniprot:Q8RY16
Length = 941
Score = 98 (39.6 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 44/161 (27%), Positives = 73/161 (45%)
Query: 340 AGGKGQHM-LTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMD--MHIHM 396
+G G M +S +L IDGL S + I+ +N + +DPALLRPGR D +++ +
Sbjct: 769 SGDSGGVMDRVVSQMLAEIDGL-SDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGV 827
Query: 397 SYCGPYGFRLLAANYLGITDCEHKLVAEIETLLKTINITPAQVAEQFMKSEDADVXXXXX 456
+ Y R+L A +T + KL ++ +L P+ M + AD
Sbjct: 828 NADASYRERVLKA----LTR-KFKLSEDV-SLYSVAKKCPSTFTGADMYALCADAWFQAA 881
Query: 457 XXXXXXXXRNGSGDVDGDEDEINLDEVAILESKKLKTQDQI 497
++ SGD+ +ED+ D V + +K DQ+
Sbjct: 882 KRKVS---KSDSGDMPTEEDDP--DSVVVEYVDFIKAMDQL 917
Score = 88 (36.0 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 217 DLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMA 265
D+K +I++ + + K+ + G + G LLYGPPGTGK+ L A+A
Sbjct: 665 DVKTSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVA 712
>UNIPROTKB|J3QRW1 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524 EMBL:AC015651
ChiTaRS:PSMC5 HGNC:HGNC:9552 Ensembl:ENST00000579708 Uniprot:J3QRW1
Length = 143
Score = 110 (43.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 29/87 (33%), Positives = 52/87 (59%)
Query: 185 YTLHRV-PD-YDA-IRWDSVKLEHPATFDTLA-MEPDLKATIMEDLDRFVRRKEFYKRVG 240
YTLH++ P+ D + V+ +T++ + ++ +K I E ++ V+ E ++ +G
Sbjct: 44 YTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKE-IKEVIELPVKHPELFEALG 102
Query: 241 RAWKRGYLLYGPPGTGKSSLVAAMANY 267
A +G LLYGPPGTGK+ L A+A++
Sbjct: 103 IAQPKGVLLYGPPGTGKTLLARAVAHH 129
>TAIR|locus:2024822 [details] [associations]
symbol:RPT1A "regulatory particle triple-A 1A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC009324 EMBL:AC024260
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123390 EMBL:AY062860 EMBL:BT000069 IPI:IPI00548766
PIR:G96577 RefSeq:NP_175778.1 UniGene:At.66918
ProteinModelPortal:Q9SSB5 SMR:Q9SSB5 IntAct:Q9SSB5 STRING:Q9SSB5
PaxDb:Q9SSB5 PRIDE:Q9SSB5 EnsemblPlants:AT1G53750.1 GeneID:841812
KEGG:ath:AT1G53750 GeneFarm:2748 TAIR:At1g53750 InParanoid:Q9SSB5
KO:K03061 OMA:DIRWELI PhylomeDB:Q9SSB5 ProtClustDB:CLSN2682130
Genevestigator:Q9SSB5 GermOnline:AT1G53750 Uniprot:Q9SSB5
Length = 426
Score = 99 (39.9 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 21/57 (36%), Positives = 36/57 (63%)
Query: 338 DFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
D GG + T+ ++N +DG + + G+ ++++ TN + LDPALLRPGR+D +
Sbjct: 280 DGVGGDNEVQRTMLEIVNQLDG-FDARGNIKVLM-ATNRPDTLDPALLRPGRLDRKV 334
Score = 78 (32.5 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 234 EFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
E + ++G +G L YGPPGTGK+ L A+AN
Sbjct: 192 EKFVKLGIDPPKGVLCYGPPGTGKTLLARAVAN 224
>DICTYBASE|DDB_G0276153 [details] [associations]
symbol:nsfA "N-ethylmaleimide-sensitive fusion
protein" species:44689 "Dictyostelium discoideum" [GO:0006928
"cellular component movement" evidence=IMP] [GO:0006897
"endocytosis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006909 "phagocytosis" evidence=IMP] [GO:0016020
"membrane" evidence=IEA;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0006935 "chemotaxis"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] [GO:0010008 "endosome membrane" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0276153 GO:GO:0005524 GO:GO:0016020
GO:GO:0046872 GO:GO:0015031 GO:GO:0006909 EMBL:AAFI02000014
GenomeReviews:CM000151_GR GO:GO:0006928 GO:GO:0010008 GO:GO:0006935
GO:GO:0030659 HSSP:Q01853 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR004201 Pfam:PF02933 SMART:SM01072 KO:K06027 OMA:MTSGQRV
EMBL:AF006826 RefSeq:XP_643273.1 ProteinModelPortal:Q75JI3
IntAct:Q75JI3 STRING:Q75JI3 EnsemblProtists:DDB0185052
GeneID:8620316 KEGG:ddi:DDB_G0276153 Uniprot:Q75JI3
Length = 738
Score = 135 (52.6 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 43/167 (25%), Positives = 79/167 (47%)
Query: 237 KRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLGNVTRDSDLRTLLLSTGNR 296
K++G +G LLYGPPGTGK+ + + L + V+ S L + +
Sbjct: 250 KKLGVNHVKGMLLYGPPGTGKTLIARQIGKMLN----GREPKVVSGPSILNKYVGQSEEN 305
Query: 297 SILVIEDIDCSVDLPDRRNGNENNADAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNF 356
++ D ++ + G+++ A+ K++ G G ++ LL
Sbjct: 306 IRMLFRD----AEIEQKAKGDDSGLHIIIFDELDAICKSRGSRQGDSGVGDSVVNQLLAM 361
Query: 357 IDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYCGPYG 403
IDG+ S + +++ TN K+ +D ALLRPGR+++H+ +S +G
Sbjct: 362 IDGVESL--NNILVIGMTNRKDMIDEALLRPGRLEVHVEISLPDEHG 406
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 91 (37.1 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 349 TLSGLLNFIDGLWSSCGDERI-IVFTTNHKERLDPALLRPGRMDMHIHMSY 398
T+ LLN +DG +SS D+RI ++ TN + LDPAL+R GR+D I +
Sbjct: 293 TMLELLNQLDG-FSS--DDRIKVIAATNRADILDPALMRSGRLDRKIEFPH 340
Score = 86 (35.3 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 39/134 (29%), Positives = 69/134 (51%)
Query: 187 LHRVP-DYDAIRWDSVKLEHPATFDTLAMEPDLKATIMEDLDRFV---RRKEFYKRVGRA 242
L +P +YD+ R +++++ T D + L+ I E ++ V KE ++++G
Sbjct: 145 LDTLPSEYDS-RVKAMEVDEKPTEDYNDIG-GLEKQIQELVEAIVLPMTHKEQFEKLGIR 202
Query: 243 WKRGYLLYGPPGTGKSSLV---AAMAN--YLKF---DVFDLQLGN---VTRDSDLRTLLL 291
+G LLYGPPGTGK+ + AA N +LK + + +G+ + RD+ LL
Sbjct: 203 PPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDA---FLLA 259
Query: 292 STGNRSILVIEDID 305
+ I+ I++ID
Sbjct: 260 KEKSPCIIFIDEID 273
>UNIPROTKB|F1N9N5 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
OMA:LYRFVTT EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00683486 Ensembl:ENSGALT00000016639 ArrayExpress:F1N9N5
Uniprot:F1N9N5
Length = 635
Score = 96 (38.9 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 26/69 (37%), Positives = 40/69 (57%)
Query: 333 RKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDM 392
++ + +F GG+ + TL+ LL +DG ++ +I+ TN + LDPAL+RPGR D
Sbjct: 259 KRGRGNF-GGQSEQENTLNQLLVEMDGFNTTTNV--VILAGTNRPDILDPALMRPGRFDR 315
Query: 393 HIHMSYCGP 401
I Y GP
Sbjct: 316 QI---YIGP 321
Score = 85 (35.0 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 201 VKLEHPATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSL 260
+K E F +A + K IME ++ F++ + Y+ +G +G +L GPPGTGK+ L
Sbjct: 143 LKDEIDVKFKDVAGCEEAKLEIMEFVN-FLKNPKQYEDLGAKIPKGAILTGPPGTGKTLL 201
Query: 261 VAAMA 265
A A
Sbjct: 202 AKATA 206
>UNIPROTKB|P37476 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0008233 "peptidase activity" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IDA] [GO:0030428 "cell septum"
evidence=IDA] [GO:0043934 "sporulation" evidence=IMP]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0006950 GO:GO:0051301 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0007049
GO:GO:0030163 EMBL:AL009126 GenomeReviews:AL009126_GR GO:GO:0043934
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0008233
GO:GO:0030428 EMBL:D26185 HOGENOM:HOG000217276 KO:K03798 PIR:E69627
RefSeq:NP_387950.1 ProteinModelPortal:P37476 SMR:P37476
IntAct:P37476 MEROPS:M41.009 EnsemblBacteria:EBBACT00000001428
GeneID:938094 KEGG:bsu:BSU00690 PATRIC:18971613 GenoList:BSU00690
OMA:ENMSYST ProtClustDB:CLSK886567 BioCyc:BSUB:BSU00690-MONOMER
Uniprot:P37476
Length = 637
Score = 104 (41.7 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 27/65 (41%), Positives = 34/65 (52%)
Query: 330 AAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGR 389
A R+ GG + TL+ LL +DG S + II+ TN + LDPALLRPGR
Sbjct: 264 AVGRQRGAGLGGGHDEREQTLNQLLVEMDGF--SANEGIIIIAATNRADILDPALLRPGR 321
Query: 390 MDMHI 394
D I
Sbjct: 322 FDRQI 326
Score = 76 (31.8 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 19/57 (33%), Positives = 31/57 (54%)
Query: 209 FDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMA 265
F +A + K ++E ++ F++ + +G +G LL GPPGTGK+ L A A
Sbjct: 160 FKDVAGADEEKQELVEVVE-FLKDPRKFAELGARIPKGVLLVGPPGTGKTLLAKACA 215
Score = 41 (19.5 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 17/66 (25%), Positives = 28/66 (42%)
Query: 133 DGKGNSHSMRPEKRLFELTFHQTHKDMVLNSYLPHVIELAKDMKDKTRVLKMYTLHRVPD 192
DGK +S S++P + ++E+ + D +L HV E K LK + P
Sbjct: 46 DGKVDSVSVQPVRGVYEVKGQLKNYDKD-QYFLTHVPE-GKGADQIFNALKKTDVKVEPA 103
Query: 193 YDAIRW 198
+ W
Sbjct: 104 QETSGW 109
>UNIPROTKB|E1BFQ0 [details] [associations]
symbol:E1BFQ0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042407 "cristae formation" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 OMA:WDEKDFR GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:DAAA02046282 IPI:IPI00707325 Ensembl:ENSBTAT00000056979
Uniprot:E1BFQ0
Length = 802
Score = 99 (39.9 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 27/69 (39%), Positives = 37/69 (53%)
Query: 333 RKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDM 392
RK GG+ + TL+ LL +DG S+ +++ TN + LDPAL+RPGR D
Sbjct: 409 RKRGRGHFGGQSEQENTLNQLLVEMDGFNSTTNV--VVLAGTNRPDVLDPALMRPGRFDR 466
Query: 393 HIHMSYCGP 401
I Y GP
Sbjct: 467 QI---YIGP 472
Score = 84 (34.6 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 217 DLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMA 265
+ K IME ++ F++ + Y+ +G +G LL GPPGTGK+ L A A
Sbjct: 310 EAKLEIMEFVN-FLKNPKQYQDLGAKIPKGALLTGPPGTGKTLLAKATA 357
>TIGR_CMR|CPS_3452 [details] [associations]
symbol:CPS_3452 "ATP-dependent metalloprotease FtsH"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 OMA:RSIIDQC
RefSeq:YP_270126.1 ProteinModelPortal:Q47YJ4 SMR:Q47YJ4
STRING:Q47YJ4 GeneID:3519317 KEGG:cps:CPS_3452 PATRIC:21469851
BioCyc:CPSY167879:GI48-3480-MONOMER Uniprot:Q47YJ4
Length = 660
Score = 98 (39.6 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 26/66 (39%), Positives = 35/66 (53%)
Query: 330 AAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFT-TNHKERLDPALLRPG 388
A R+ GG + TL+ +L +DG G+E +IV TN + LDPALLRPG
Sbjct: 257 AVGRQRGAGMGGGHDEREQTLNQMLVEMDGFE---GNEGVIVIAATNRPDVLDPALLRPG 313
Query: 389 RMDMHI 394
R D +
Sbjct: 314 RFDRQV 319
Score = 83 (34.3 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 22/68 (32%), Positives = 35/68 (51%)
Query: 208 TFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANY 267
TF +A + K + E +D ++R ++++G G LL G PGTGK+ L A+A
Sbjct: 152 TFADVAGCDEAKEDVAELVD-YLREPSRFQKLGGRIPSGILLVGQPGTGKTLLAKAIAGE 210
Query: 268 LKFDVFDL 275
K F +
Sbjct: 211 AKVPFFTI 218
>POMBASE|SPBC56F2.07c [details] [associations]
symbol:SPBC56F2.07c "ribosome biogenesis factor
recycling AAA family ATPase (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=ISM] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPBC56F2.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0016887 PIR:T40537
RefSeq:NP_596710.1 HSSP:Q01853 ProteinModelPortal:O60058
PRIDE:O60058 EnsemblFungi:SPBC56F2.07c.1 GeneID:2540537
KEGG:spo:SPBC56F2.07c eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
OMA:SSENMAT OrthoDB:EOG49CTH0 NextBio:20801663 GO:GO:0042273
Uniprot:O60058
Length = 809
Score = 94 (38.1 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 36/129 (27%), Positives = 64/129 (49%)
Query: 208 TFDTLA-MEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
TF ++ ++ + A I + ++ + E +K RG LLYGPPGTGK+ ++ A+A
Sbjct: 277 TFSSIGGLQAQI-AQIRDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAA 335
Query: 267 YLKFDVFDLQ----LGNVTRDSDLRTLLLSTGNR----SILVIEDIDCSVDLPDRRNGNE 318
VF + +G +++ R + R SI+ I++ID P R E
Sbjct: 336 EANAQVFTIDGPSVVGKYLGETESRLRKIFEDARAHQPSIIFIDEIDALA--PKR---TE 390
Query: 319 NNADAQSKA 327
+ ++A+S+A
Sbjct: 391 DVSEAESRA 399
Score = 89 (36.4 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 350 LSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYCGPYGF 404
++ LLN +DG+ + +++ TN + +DPAL+RPGR+D + Y GP F
Sbjct: 667 VAALLNELDGIEAL--RNVLVLAATNRPDMIDPALMRPGRLD---RLLYVGPPNF 716
>GENEDB_PFALCIPARUM|PFF0940c [details] [associations]
symbol:PFF0940c "cell division cycle protein 48
homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 96 (38.9 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 26/70 (37%), Positives = 37/70 (52%)
Query: 197 RWDSVKLEHPATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTG 256
R D KL+ D + L A I E ++ +R +K +G RG LLYGPPG+G
Sbjct: 195 RDDEEKLDEIGYDDIGGCKKQL-AQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSG 253
Query: 257 KSSLVAAMAN 266
K+ + A+AN
Sbjct: 254 KTCIARAVAN 263
Score = 87 (35.7 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 43/165 (26%), Positives = 70/165 (42%)
Query: 342 GKGQHMLTLSGLLNFIDGLWSSCGDERIIVF--TTNHKERLDPALLRPGRMDMHIHMSYC 399
G G ++ LL IDG+ G ++ + F TN E LD ALLRPGR+D I++
Sbjct: 596 GSGAGDRVMNQLLTEIDGV----GPKKNLFFIGATNRPELLDEALLRPGRLDQLIYIPL- 650
Query: 400 GPYGFRLLAANYLGITDCEHKLVAEIETLL-KTINITPAQVAEQFMKSEDADVXXXXXXX 458
G R+ + + C I+ L KT + A +AE ++ A +
Sbjct: 651 PDLGARISILTAI-LRKCPVAENVPIDFLAQKTAGFSGADLAELCQRAARAAIRDAIDAE 709
Query: 459 XXXXXXR-NGSGDVDGDEDEINLDEVAILESKKLKTQDQIQDKGK 502
+ S + +++E N ++V KT+ Q D+ K
Sbjct: 710 EMNKKSKLELSNKKENEQNETNENDV------HNKTEQQANDQQK 748
Score = 85 (35.0 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 18/58 (31%), Positives = 34/58 (58%)
Query: 209 FDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
+D + ++K+T+ E + + + +++ G + RG L YGPPG GK+ L A+A+
Sbjct: 479 WDDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLLAKAVAS 536
Score = 76 (31.8 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 25/78 (32%), Positives = 42/78 (53%)
Query: 331 AVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRM 390
A ++ KT+ G+ + + +S LL +DG+ S G + +++ TN + +DPAL R GR
Sbjct: 313 APKREKTN---GEVERRV-VSQLLTLMDGI-KSRG-QVVVIAATNRQNSIDPALRRFGRF 366
Query: 391 DMHIHMSYCGPYG-FRLL 407
D I + G F +L
Sbjct: 367 DREIDIGVPDDNGRFEIL 384
>UNIPROTKB|C6KT34 [details] [associations]
symbol:PFF0940c "Cell division cycle protein 48 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 96 (38.9 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 26/70 (37%), Positives = 37/70 (52%)
Query: 197 RWDSVKLEHPATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTG 256
R D KL+ D + L A I E ++ +R +K +G RG LLYGPPG+G
Sbjct: 195 RDDEEKLDEIGYDDIGGCKKQL-AQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSG 253
Query: 257 KSSLVAAMAN 266
K+ + A+AN
Sbjct: 254 KTCIARAVAN 263
Score = 87 (35.7 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 43/165 (26%), Positives = 70/165 (42%)
Query: 342 GKGQHMLTLSGLLNFIDGLWSSCGDERIIVF--TTNHKERLDPALLRPGRMDMHIHMSYC 399
G G ++ LL IDG+ G ++ + F TN E LD ALLRPGR+D I++
Sbjct: 596 GSGAGDRVMNQLLTEIDGV----GPKKNLFFIGATNRPELLDEALLRPGRLDQLIYIPL- 650
Query: 400 GPYGFRLLAANYLGITDCEHKLVAEIETLL-KTINITPAQVAEQFMKSEDADVXXXXXXX 458
G R+ + + C I+ L KT + A +AE ++ A +
Sbjct: 651 PDLGARISILTAI-LRKCPVAENVPIDFLAQKTAGFSGADLAELCQRAARAAIRDAIDAE 709
Query: 459 XXXXXXR-NGSGDVDGDEDEINLDEVAILESKKLKTQDQIQDKGK 502
+ S + +++E N ++V KT+ Q D+ K
Sbjct: 710 EMNKKSKLELSNKKENEQNETNENDV------HNKTEQQANDQQK 748
Score = 85 (35.0 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 18/58 (31%), Positives = 34/58 (58%)
Query: 209 FDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
+D + ++K+T+ E + + + +++ G + RG L YGPPG GK+ L A+A+
Sbjct: 479 WDDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLLAKAVAS 536
Score = 76 (31.8 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 25/78 (32%), Positives = 42/78 (53%)
Query: 331 AVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRM 390
A ++ KT+ G+ + + +S LL +DG+ S G + +++ TN + +DPAL R GR
Sbjct: 313 APKREKTN---GEVERRV-VSQLLTLMDGI-KSRG-QVVVIAATNRQNSIDPALRRFGRF 366
Query: 391 DMHIHMSYCGPYG-FRLL 407
D I + G F +L
Sbjct: 367 DREIDIGVPDDNGRFEIL 384
>UNIPROTKB|Q9BVQ7 [details] [associations]
symbol:SPATA5L1 "Spermatogenesis-associated protein 5-like
protein 1" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 HSSP:Q01853 eggNOG:COG0464 HOGENOM:HOG000223225
GO:GO:0017111 EMBL:AC025580 HOVERGEN:HBG001226 CTD:79029
OMA:TWEQIGG OrthoDB:EOG42RD70 EMBL:AK022348 EMBL:AK023232
EMBL:AK291457 EMBL:AC090527 EMBL:BC000981 IPI:IPI00031608
IPI:IPI00386906 IPI:IPI00890778 RefSeq:NP_076968.2
UniGene:Hs.369657 ProteinModelPortal:Q9BVQ7 SMR:Q9BVQ7
STRING:Q9BVQ7 PhosphoSite:Q9BVQ7 DMDM:292495038 PaxDb:Q9BVQ7
PRIDE:Q9BVQ7 Ensembl:ENST00000305560 Ensembl:ENST00000531970
Ensembl:ENST00000559860 GeneID:79029 KEGG:hsa:79029 UCSC:uc001zve.3
GeneCards:GC15P045694 H-InvDB:HIX0012209 HGNC:HGNC:28762
HPA:HPA043679 neXtProt:NX_Q9BVQ7 PharmGKB:PA134923477
InParanoid:Q9BVQ7 PhylomeDB:Q9BVQ7 GenomeRNAi:79029 NextBio:67739
Bgee:Q9BVQ7 CleanEx:HS_SPATA5L1 Genevestigator:Q9BVQ7
Uniprot:Q9BVQ7
Length = 753
Score = 134 (52.2 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 52/201 (25%), Positives = 92/201 (45%)
Query: 206 PATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMA 265
P ++ + D+K + + ++ ++ + R+G +G LLYGPPG K++LV A+A
Sbjct: 460 PVDWEEIGGLEDVKLKLKQSIEWPLKFPWEFVRMGLTQPKGVLLYGPPGCAKTTLVRALA 519
Query: 266 N--YLKF------DVFDLQLGNVTR--DSDLRTLLLSTGNRSILVIEDIDCSVDLPDRRN 315
+ F D+F +G+ + R ST +IL +++ID + R+
Sbjct: 520 TSCHCSFVSVSGADLFSPFVGDSEKVLSQIFRQARASTP--AILFLDEID---SILGARS 574
Query: 316 GNENNADAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTN 375
++ D Q + +V N+ D G G + G + +I+ TN
Sbjct: 575 ASKTGCDVQERVL--SVLLNELD---GVGLKTIERRGSKSSQQEFQEVFNRSVMIIAATN 629
Query: 376 HKERLDPALLRPGRMDMHIHM 396
+ LD ALLRPGR+D I++
Sbjct: 630 RPDVLDTALLRPGRLDKIIYI 650
>CGD|CAL0000075 [details] [associations]
symbol:AFG3 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005745 "m-AAA complex"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 96 (38.9 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 30/98 (30%), Positives = 49/98 (50%)
Query: 341 GGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYCG 400
GG + TL+ LL +DG ++ D +++ TN + LD ALLRPGR D HI +
Sbjct: 401 GGNDERENTLNQLLVEMDGFDTT--DHVVVLAGTNRPDILDKALLRPGRFDRHISIDVPD 458
Query: 401 PYGFRLLAANYLGITDCEHKLVAEIETLLKTINITPAQ 438
G + + +L + K V +I+ K ++ + Q
Sbjct: 459 VEGRKQIFKVHLN--KLKLKSVQDIDAKQKDVDFSKYQ 494
Score = 86 (35.3 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 22/57 (38%), Positives = 33/57 (57%)
Query: 209 FDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMA 265
F +A + K IME + +F++ Y+++G RG +L GPPGTGK+ L A A
Sbjct: 286 FKDVAGCDESKEEIMEFV-KFLQDPHKYEKLGAKIPRGAILSGPPGTGKTLLAKATA 341
>UNIPROTKB|Q5AJC2 [details] [associations]
symbol:AFG3 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 96 (38.9 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 30/98 (30%), Positives = 49/98 (50%)
Query: 341 GGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYCG 400
GG + TL+ LL +DG ++ D +++ TN + LD ALLRPGR D HI +
Sbjct: 401 GGNDERENTLNQLLVEMDGFDTT--DHVVVLAGTNRPDILDKALLRPGRFDRHISIDVPD 458
Query: 401 PYGFRLLAANYLGITDCEHKLVAEIETLLKTINITPAQ 438
G + + +L + K V +I+ K ++ + Q
Sbjct: 459 VEGRKQIFKVHLN--KLKLKSVQDIDAKQKDVDFSKYQ 494
Score = 86 (35.3 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 22/57 (38%), Positives = 33/57 (57%)
Query: 209 FDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMA 265
F +A + K IME + +F++ Y+++G RG +L GPPGTGK+ L A A
Sbjct: 286 FKDVAGCDESKEEIMEFV-KFLQDPHKYEKLGAKIPRGAILSGPPGTGKTLLAKATA 341
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 98 (39.6 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 31/105 (29%), Positives = 49/105 (46%)
Query: 220 ATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLGN 279
A I E ++ +R +K +G RG L+YGPPGTGK+ + A+AN F +
Sbjct: 211 AQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPE 270
Query: 280 VTR------DSDLRTLLLSTGNRS--ILVIEDIDCSVDLPDRRNG 316
+ +S+LR S I+ I++ID D+ +G
Sbjct: 271 IMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKRDKTHG 315
Score = 85 (35.0 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 195 AIRWDSVKLEHPATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPG 254
A+R V++ + D +E +K + E + V + + + G RG L YGPPG
Sbjct: 460 ALRETVVEVPNTTWTDIGGLE-SVKKELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPG 518
Query: 255 TGKSSLVAAMAN 266
GK+ L A+AN
Sbjct: 519 CGKTLLAKAIAN 530
Score = 84 (34.6 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 25/75 (33%), Positives = 41/75 (54%)
Query: 322 DAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLD 381
D+ +KA G N D AGG ++ + +L +DG+ + I+ TN + +D
Sbjct: 577 DSIAKARGG----NVGD-AGGAADRVI--NQILTEMDGMGAK--KNVFIIGATNRPDIID 627
Query: 382 PALLRPGRMDMHIHM 396
PA+LRPGR+D I++
Sbjct: 628 PAILRPGRLDQLIYI 642
Score = 74 (31.1 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 21/59 (35%), Positives = 30/59 (50%)
Query: 336 KTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
K D G+ + + +S LL +DG+ S I++ TN +DPAL R GR D I
Sbjct: 309 KRDKTHGEVERRI-VSQLLTLMDGMKKS--SHLIVMAATNRPNSIDPALRRFGRFDREI 364
>TAIR|locus:2011952 [details] [associations]
symbol:FTSH1 "FTSH protease 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0031977
"thylakoid lumen" evidence=IDA] [GO:0010206 "photosystem II repair"
evidence=TAS] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0007275
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 eggNOG:COG0465
TIGRFAMs:TIGR01241 GO:GO:0009535 GO:GO:0031977 GO:GO:0004176
GO:GO:0010206 EMBL:AC007980 EMBL:X99808 EMBL:AY091095 EMBL:AY123034
EMBL:Y12780 IPI:IPI00518805 PIR:G96538 RefSeq:NP_564563.1
UniGene:At.21777 ProteinModelPortal:Q39102 SMR:Q39102 STRING:Q39102
MEROPS:M41.020 PaxDb:Q39102 PRIDE:Q39102 EnsemblPlants:AT1G50250.1
GeneID:841447 KEGG:ath:AT1G50250 GeneFarm:2667 TAIR:At1g50250
HOGENOM:HOG000217276 InParanoid:Q39102 KO:K03798 OMA:GGNPAMN
PhylomeDB:Q39102 ProtClustDB:CLSN2688633 Genevestigator:Q39102
GermOnline:AT1G50250 GO:GO:0010304 Uniprot:Q39102
Length = 716
Score = 93 (37.8 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 23/65 (35%), Positives = 33/65 (50%)
Query: 330 AAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGR 389
A R+ GG + T++ LL +DG + G I++ TN + LD ALLRPGR
Sbjct: 365 AVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGV--IVLAATNRPDVLDSALLRPGR 422
Query: 390 MDMHI 394
D +
Sbjct: 423 FDRQV 427
Score = 88 (36.0 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 204 EHPATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAA 263
E +F +A K + E +D F++ + Y +G +G LL GPPGTGK+ L A
Sbjct: 256 ETGVSFADVAGADQAKLELQEVVD-FLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARA 314
Query: 264 MA 265
+A
Sbjct: 315 VA 316
>TAIR|locus:2057386 [details] [associations]
symbol:ftsh4 "FTSH protease 4" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA;ISS]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=ISS] [GO:0016020
"membrane" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009536 "plastid" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0009536 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
GO:GO:0005743 GO:GO:0046872 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49
EMBL:AC004747 GO:GO:0004176 HOGENOM:HOG000217276 EMBL:AK220842
IPI:IPI00534293 PIR:T02610 RefSeq:NP_565616.1 UniGene:At.23415
ProteinModelPortal:O80983 SMR:O80983 STRING:O80983 MEROPS:M41.004
PaxDb:O80983 PRIDE:O80983 EnsemblPlants:AT2G26140.1 GeneID:817154
KEGG:ath:AT2G26140 GeneFarm:2508 TAIR:At2g26140 InParanoid:O80983
OMA:HTEGALP PhylomeDB:O80983 ProtClustDB:CLSN2688437
Genevestigator:O80983 Uniprot:O80983
Length = 717
Score = 93 (37.8 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 24/51 (47%), Positives = 32/51 (62%)
Query: 345 QHM-LTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
Q+M +TL+ +L +DG + G I+V TN E LD AL+RPGR D HI
Sbjct: 341 QYMKMTLNQMLVELDGFKQNEGI--IVVAATNFPESLDKALVRPGRFDRHI 389
Score = 88 (36.0 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 223 MEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMA 265
+E++ ++R + + R+G +G LL GPPGTGK+ L A+A
Sbjct: 239 LEEIVHYLRDPKRFTRLGGKLPKGVLLVGPPGTGKTMLARAIA 281
>FB|FBgn0028687 [details] [associations]
symbol:Rpt1 "Regulatory particle triple-A ATPase 1"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE013599 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
KO:K03061 OMA:DIRWELI GeneTree:ENSGT00550000074978 HSSP:Q9LCZ4
EMBL:AF145307 EMBL:AY061606 RefSeq:NP_477473.1 UniGene:Dm.3425
SMR:Q7KMQ0 IntAct:Q7KMQ0 STRING:Q7KMQ0 EnsemblMetazoa:FBtr0088947
GeneID:35701 KEGG:dme:Dmel_CG1341 UCSC:CG1341-RA CTD:35701
FlyBase:FBgn0028687 HOGENOM:HOG000237377 InParanoid:Q7KMQ0
OrthoDB:EOG4X3FGQ GenomeRNAi:35701 NextBio:794815 Uniprot:Q7KMQ0
Length = 433
Score = 102 (41.0 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 22/57 (38%), Positives = 36/57 (63%)
Query: 338 DFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
D AGG + T+ L+N +DG + G+ ++++ TN + LDPAL+RPGR+D +
Sbjct: 287 DGAGGDNEVQRTMLELINQLDG-FDPRGNIKVLM-ATNRPDTLDPALMRPGRLDRKV 341
Score = 73 (30.8 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 234 EFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
E + +G +G LL+GPPGTGK+ A+AN
Sbjct: 199 EKFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 231
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 97 (39.2 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 34/128 (26%), Positives = 58/128 (45%)
Query: 197 RWDSVKLEHPATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTG 256
R D +L+ D + + A I E ++ +R + +K +G +G LLYGPPG+G
Sbjct: 195 REDEERLDEVGYDDVGGVRKQM-AQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSG 253
Query: 257 KSSLVAAMANYLKFDVFDLQLGNVTR------DSDLRTLLLSTGNR--SILVIEDIDCSV 308
K+ + A+AN F + + +S+LR SI+ I++ID
Sbjct: 254 KTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIA 313
Query: 309 DLPDRRNG 316
++ NG
Sbjct: 314 PKREKTNG 321
Score = 93 (37.8 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 23/72 (31%), Positives = 40/72 (55%)
Query: 195 AIRWDSVKLEHPATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPG 254
A+R V++ + + D +E ++K + E + V E +++ G + +G L YGPPG
Sbjct: 466 ALRETVVEVPNVSWEDIGGLE-NVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPG 524
Query: 255 TGKSSLVAAMAN 266
GK+ L A+AN
Sbjct: 525 CGKTLLAKAIAN 536
Score = 85 (35.0 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 24/67 (35%), Positives = 35/67 (52%)
Query: 330 AAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGR 389
A R N AGG +L + LL +DG+ + I+ TN + +D ALLRPGR
Sbjct: 586 ATQRGNSAGDAGGAADRVL--NQLLTEMDGM--NAKKTVFIIGATNRPDIIDSALLRPGR 641
Query: 390 MDMHIHM 396
+D I++
Sbjct: 642 LDQLIYI 648
Score = 72 (30.4 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 331 AVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRM 390
A ++ KT+ G+ + + +S LL +DGL S I++ TN +DPAL R GR
Sbjct: 313 APKREKTN---GEVERRI-VSQLLTLMDGLKSRA--HVIVMGATNRPNSIDPALRRFGRF 366
Query: 391 DMHI 394
D I
Sbjct: 367 DREI 370
>UNIPROTKB|F1NLN4 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:AADN02009235 IPI:IPI00593232 Ensembl:ENSGALT00000019309
Uniprot:F1NLN4
Length = 704
Score = 133 (51.9 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 54/188 (28%), Positives = 87/188 (46%)
Query: 208 TFDTLA-MEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
T+D + + LK TI E ++ ++R E +K G + RG LLYGPPGTGK+ + A+AN
Sbjct: 316 TYDMIGGLSSQLK-TIRETVELPLKRAELFKSYGISPPRGVLLYGPPGTGKTLIAKAIAN 374
Query: 267 YLKFDVFDLQLGNVTR------DSDLRTLLLSTGNR--SILVIEDIDCSVDLPDRRNGNE 318
+ V + + +S LR + R SI+ I+++D L +R G +
Sbjct: 375 EVGAHVTVINGPEIISKFYGESESRLRQIFAEASLRRPSIIFIDELDA---LCPKREGAQ 431
Query: 319 NNADAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLN---FIDGLWSSCG--DERIIVFT 373
N + + A + G +GQ L + G N +D G D+ I +
Sbjct: 432 NEVEKRV-VASLLTLMDGIGSEGSEGQ--LVVLGATNRPHALDAALRRPGRFDKEIEIGI 488
Query: 374 TNHKERLD 381
N ++RLD
Sbjct: 489 PNAQDRLD 496
>UNIPROTKB|F1NXP0 [details] [associations]
symbol:SPG7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=IEA] [GO:0008089 "anterograde axon cargo
transport" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0008089
GO:GO:0030163 GeneTree:ENSGT00530000063070 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 OMA:MMDHEAK EMBL:AADN02054132
IPI:IPI00601320 Ensembl:ENSGALT00000010016 Uniprot:F1NXP0
Length = 768
Score = 102 (41.0 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 25/66 (37%), Positives = 40/66 (60%)
Query: 330 AAVRKNKTDFAG-GKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPG 388
A +K T+ +G + TL+ LL +DG+ ++ D I++ +TN + LD AL+RPG
Sbjct: 385 AVGKKRSTNVSGFANAEEEQTLNQLLVEMDGMGTT--DHVIVLASTNRADVLDNALMRPG 442
Query: 389 RMDMHI 394
R+D HI
Sbjct: 443 RLDRHI 448
Score = 79 (32.9 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 19/57 (33%), Positives = 32/57 (56%)
Query: 209 FDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMA 265
F +A + K + E +D +++ + Y ++G +G LL GPPG GK+ L A+A
Sbjct: 281 FKDVAGMHEAKMEVKEFVD-YLKNPDRYLQLGAKVPKGALLLGPPGCGKTLLAKAVA 336
>FB|FBgn0034792 [details] [associations]
symbol:CG3499 species:7227 "Drosophila melanogaster"
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0005743 "mitochondrial inner membrane" evidence=ISS]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
EMBL:AE013599 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111
TIGRFAMs:TIGR01241 HSSP:Q9LCZ4 GeneTree:ENSGT00550000074836
KO:K08955 EMBL:AY051480 RefSeq:NP_726263.1 UniGene:Dm.4589
SMR:Q9W1Y0 IntAct:Q9W1Y0 MINT:MINT-924656
EnsemblMetazoa:FBtr0071906 GeneID:37636 KEGG:dme:Dmel_CG3499
UCSC:CG3499-RB FlyBase:FBgn0034792 InParanoid:Q9W1Y0
OrthoDB:EOG4Z613M GenomeRNAi:37636 NextBio:804672 Uniprot:Q9W1Y0
Length = 736
Score = 91 (37.1 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 20/49 (40%), Positives = 32/49 (65%)
Query: 349 TLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMS 397
T++ LL+ +DG + G I++ TN ++ LD ALLRPGR D+ + +S
Sbjct: 420 TINQLLSEMDGFHQNAGV--IVLGATNRRDDLDQALLRPGRFDVEVMVS 466
Score = 90 (36.7 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 22/66 (33%), Positives = 35/66 (53%)
Query: 208 TFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANY 267
TF+ + + K + E ++ F++ E + +G +G LL GPPGTGK+ L A+A
Sbjct: 298 TFEDVKGCDEAKQELKEVVE-FLKSPEKFSNLGGKLPKGVLLVGPPGTGKTLLARAVAGE 356
Query: 268 LKFDVF 273
K F
Sbjct: 357 AKVPFF 362
>ZFIN|ZDB-GENE-030131-5391 [details] [associations]
symbol:spg7 "spastic paraplegia 7" species:7955
"Danio rerio" [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 SMART:SM00382
ZFIN:ZDB-GENE-030131-5391 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:6687 KO:K09552 OMA:MMDHEAK EMBL:AL954648 EMBL:BX470191
IPI:IPI00483001 RefSeq:XP_001923118.1 UniGene:Dr.105782
Ensembl:ENSDART00000098438 GeneID:794740 KEGG:dre:794740
NextBio:20931970 Uniprot:E7F2S4
Length = 788
Score = 101 (40.6 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 25/66 (37%), Positives = 40/66 (60%)
Query: 330 AAVRKNKTDFAG-GKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPG 388
A +K T+ +G + TL+ LL +DG+ ++ D I++ +TN + LD AL+RPG
Sbjct: 403 AVGKKRSTNMSGFSNTEEEQTLNQLLVEMDGMGTT--DHVIVLASTNRADILDNALMRPG 460
Query: 389 RMDMHI 394
R+D HI
Sbjct: 461 RLDRHI 466
Score = 80 (33.2 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 208 TFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMA 265
+F +A + K + E +D +++ + Y ++G +G LL GPPG GK+ L A+A
Sbjct: 298 SFKDVAGMREAKMEVKEFVD-YLKNPDRYLQLGAKVPKGSLLLGPPGCGKTLLAKAVA 354
>WB|WBGene00008053 [details] [associations]
symbol:cdc-48.2 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 98 (39.6 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 31/105 (29%), Positives = 52/105 (49%)
Query: 220 ATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQ--- 276
A I E ++ +R + +K +G RG LL+GPPGTGK+ + A+AN F +
Sbjct: 219 AQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVANETGAFFFLINGPE 278
Query: 277 -LGNVTRDSD--LRTLLLSTGNRS--ILVIEDIDCSVDLPDRRNG 316
+ ++ +S+ LR S IL I++ID ++ +G
Sbjct: 279 IMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKREKAHG 323
Score = 90 (36.7 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 23/65 (35%), Positives = 33/65 (50%)
Query: 203 LEHP-ATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLV 261
+E P T+ + ++K + E + V E Y + G RG L YGPPG GK+ L
Sbjct: 474 VETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLA 533
Query: 262 AAMAN 266
A+AN
Sbjct: 534 KAIAN 538
Score = 83 (34.3 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 322 DAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLD 381
D+ +KA G +V AGG ++ + +L +DG+ + I+ TN + +D
Sbjct: 585 DSIAKARGGSVGD-----AGGAADRVI--NQVLTEMDGM--NAKKNVFIIGATNRPDIID 635
Query: 382 PALLRPGRMDMHIHM 396
PA+LRPGR+D I++
Sbjct: 636 PAVLRPGRLDQLIYI 650
>UNIPROTKB|P54812 [details] [associations]
symbol:cdc-48.2 "Transitional endoplasmic reticulum ATPase
homolog 2" species:6239 "Caenorhabditis elegans" [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 98 (39.6 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 31/105 (29%), Positives = 52/105 (49%)
Query: 220 ATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQ--- 276
A I E ++ +R + +K +G RG LL+GPPGTGK+ + A+AN F +
Sbjct: 219 AQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVANETGAFFFLINGPE 278
Query: 277 -LGNVTRDSD--LRTLLLSTGNRS--ILVIEDIDCSVDLPDRRNG 316
+ ++ +S+ LR S IL I++ID ++ +G
Sbjct: 279 IMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKREKAHG 323
Score = 90 (36.7 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 23/65 (35%), Positives = 33/65 (50%)
Query: 203 LEHP-ATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLV 261
+E P T+ + ++K + E + V E Y + G RG L YGPPG GK+ L
Sbjct: 474 VETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLA 533
Query: 262 AAMAN 266
A+AN
Sbjct: 534 KAIAN 538
Score = 83 (34.3 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 322 DAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLD 381
D+ +KA G +V AGG ++ + +L +DG+ + I+ TN + +D
Sbjct: 585 DSIAKARGGSVGD-----AGGAADRVI--NQVLTEMDGM--NAKKNVFIIGATNRPDIID 635
Query: 382 PALLRPGRMDMHIHM 396
PA+LRPGR+D I++
Sbjct: 636 PAVLRPGRLDQLIYI 650
>UNIPROTKB|E1BZ74 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0016265 "death" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0042407 "cristae formation" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0060013 "righting
reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0008270 GO:GO:0006508
GO:GO:0040014 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 GO:GO:0016265
GO:GO:0060013 EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00603273 Ensembl:ENSGALT00000022474 ArrayExpress:E1BZ74
Uniprot:E1BZ74
Length = 805
Score = 96 (38.9 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 26/69 (37%), Positives = 40/69 (57%)
Query: 333 RKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDM 392
++ + +F GG+ + TL+ LL +DG ++ +I+ TN + LDPAL+RPGR D
Sbjct: 415 KRGRGNF-GGQSEQENTLNQLLVEMDGFNTTTNV--VILAGTNRPDILDPALMRPGRFDR 471
Query: 393 HIHMSYCGP 401
I Y GP
Sbjct: 472 QI---YIGP 477
Score = 85 (35.0 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 201 VKLEHPATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSL 260
+K E F +A + K IME ++ F++ + Y+ +G +G +L GPPGTGK+ L
Sbjct: 299 LKDEIDVKFKDVAGCEEAKLEIMEFVN-FLKNPKQYEDLGAKIPKGAILTGPPGTGKTLL 357
Query: 261 VAAMA 265
A A
Sbjct: 358 AKATA 362
>UNIPROTKB|I3LLQ8 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0006508 GO:GO:0040014 GO:GO:0004222 GO:GO:0042552
GO:GO:0007409 GO:GO:0030163 GeneTree:ENSGT00530000063070
GO:GO:0017111 GO:GO:0042407 GO:GO:0008053 GO:GO:0034982
TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675
GO:GO:0060013 EMBL:FP565334 Ensembl:ENSSSCT00000025900
Uniprot:I3LLQ8
Length = 597
Score = 94 (38.1 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 26/69 (37%), Positives = 40/69 (57%)
Query: 333 RKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDM 392
++ + +F GG+ + TL+ LL +DG ++ +I+ TN + LDPALLRPGR D
Sbjct: 207 KRGRGNF-GGQSEQENTLNQLLVEMDGFNTTTNV--VILAGTNRPDILDPALLRPGRFDR 263
Query: 393 HIHMSYCGP 401
I + GP
Sbjct: 264 QI---FIGP 269
Score = 84 (34.6 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 24/66 (36%), Positives = 38/66 (57%)
Query: 201 VKLEHPATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVG-RAWKRGYLLYGPPGTGKSS 259
+K E F +A + K IME ++ F++ + Y+ +G + K+G +L GPPGTGK+
Sbjct: 90 LKDEIDVKFKDVAGCEEAKLEIMEFVN-FLKNPKQYQDLGAKIPKKGAILTGPPGTGKTL 148
Query: 260 LVAAMA 265
L A A
Sbjct: 149 LAKATA 154
>TAIR|locus:2103555 [details] [associations]
symbol:CIP111 "Cam interacting protein 111" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IDA;TAS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GO:GO:0016887 GO:GO:0005516 HSSP:Q01853
eggNOG:COG0464 EMBL:AL390921 GO:GO:0009535 HOGENOM:HOG000223224
EMBL:AF217546 EMBL:AF217547 IPI:IPI00534707 PIR:T50927 PIR:T51257
RefSeq:NP_191228.1 UniGene:At.9830 ProteinModelPortal:Q9LET7
SMR:Q9LET7 IntAct:Q9LET7 STRING:Q9LET7 PRIDE:Q9LET7
EnsemblPlants:AT3G56690.1 GeneID:824836 KEGG:ath:AT3G56690
GeneFarm:2042 TAIR:At3g56690 InParanoid:Q9LET7 OMA:SEAKLNF
PhylomeDB:Q9LET7 ProtClustDB:CLSN2684205 Genevestigator:Q9LET7
Uniprot:Q9LET7
Length = 1022
Score = 93 (37.8 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 20/56 (35%), Positives = 33/56 (58%)
Query: 341 GGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHM 396
GG+ ++ LLN +DG+ S D +++ TN + ++PAL RPGR+D I +
Sbjct: 496 GGEELSQRMVATLLNLMDGI--SRTDGVVVIAATNRPDSIEPALRRPGRLDREIEI 549
Score = 91 (37.1 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 32/133 (24%), Positives = 65/133 (48%)
Query: 201 VKLEHP-ATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSS 259
V LE P ++ + + ++K +ME ++ + ++ +KR+G G L++GPPG K+
Sbjct: 714 VILEVPKVNWEDVGGQNEVKNQLMEAVEWPQKHQDAFKRIGTRPPSGILMFGPPGCSKTL 773
Query: 260 LVAAMA-----NYLKF---DVFDLQLGNVTRDSDLRTLLLST-GNR-SILVIEDIDCSVD 309
+ A+A N+L ++F +G + +R+L N SI+ ++ID
Sbjct: 774 MARAVASEAKLNFLAVKGPELFSKWVGE--SEKAVRSLFAKARANAPSIIFFDEIDSLAS 831
Query: 310 LPDRRNGNENNAD 322
+ + N + +D
Sbjct: 832 IRGKENDGVSVSD 844
Score = 90 (36.7 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 46/188 (24%), Positives = 83/188 (44%)
Query: 142 RPEKRLFELTFHQTHKDMVLNS---YLPHVIELAKDMKDKTRVLKMYTLHRVPDYDAIRW 198
R +KR + T ++ H M+ YL H ++LA +++ +T V + +D
Sbjct: 328 RADKRPSD-TSNRNHAFMINQETKVYLHHTLDLASEIQGRTFVQGL-------QFD--EG 377
Query: 199 DSVKLEHPATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKS 258
++V E + L+ E I+ D+ K +G +G L++GPPGTGK+
Sbjct: 378 ENVGCEI-SKLGGLSKE----YAILRDIIDSSSIKNSLSSLGLRPTKGVLIHGPPGTGKT 432
Query: 259 SLVAAMANYLKFDVFDLQ----LGNVTRDSD--LRTLLLSTGNRS--ILVIEDIDCSVDL 310
SL A + + F + + +S+ L + S N + ++ I+D+D
Sbjct: 433 SLARTFARHSGVNFFSVNGPEIISQYLGESEKALDEVFRSASNATPAVVFIDDLDAIA-- 490
Query: 311 PDRRNGNE 318
P R+ G E
Sbjct: 491 PARKEGGE 498
Score = 84 (34.6 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 25/72 (34%), Positives = 36/72 (50%)
Query: 330 AAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGR 389
A++R + D G +S LL +DGL G ++ TN +++D ALLRPGR
Sbjct: 830 ASIRGKEND---GVSVSDRVMSQLLVELDGLHQRVGVT--VIAATNRPDKIDSALLRPGR 884
Query: 390 MDMHIHMSYCGP 401
D + Y GP
Sbjct: 885 FD---RLLYVGP 893
>UNIPROTKB|E9PKD5 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:AC090559 HGNC:HGNC:9549 ChiTaRS:PSMC3
IPI:IPI00978735 ProteinModelPortal:E9PKD5 SMR:E9PKD5 PRIDE:E9PKD5
Ensembl:ENST00000524447 ArrayExpress:E9PKD5 Bgee:E9PKD5
Uniprot:E9PKD5
Length = 294
Score = 95 (38.5 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 210 DTLAMEPDLKATIMEDLDRFV---RRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
+TL E D + ME ++ V KE ++ +G +G L+YGPPGTGK+ L A A
Sbjct: 127 ETLPTEYDSRVKAMELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAA 186
Query: 267 YLK 269
K
Sbjct: 187 QTK 189
Score = 74 (31.1 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 349 TLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMD 391
T+ LLN +DG + + ++ TN + LDPALLR GR+D
Sbjct: 253 TMLELLNQLDGFQPNTQVK--VIAATNRVDILDPALLRSGRLD 293
>FB|FBgn0013998 [details] [associations]
symbol:Nsf2 "NEM-sensitive fusion protein 2" species:7227
"Drosophila melanogaster" [GO:0005737 "cytoplasm" evidence=ISS;NAS]
[GO:0007269 "neurotransmitter secretion" evidence=NAS] [GO:0016082
"synaptic vesicle priming" evidence=NAS] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISS;NAS] [GO:0016192
"vesicle-mediated transport" evidence=NAS] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=NAS] [GO:0007274
"neuromuscular synaptic transmission" evidence=IMP] [GO:0008582
"regulation of synaptic growth at neuromuscular junction"
evidence=IMP] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0031201
"SNARE complex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE014297 GO:GO:0005524
GO:GO:0005737 GO:GO:0046872 GO:GO:0015031 GO:GO:0007274
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0008582 GO:GO:0016082 InterPro:IPR004201
Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00530000064085 KO:K06027 OrthoDB:EOG4RFJ7K
EMBL:U30502 EMBL:BT023784 EMBL:U28836 RefSeq:NP_788676.1
UniGene:Dm.6688 ProteinModelPortal:P54351 SMR:P54351
MINT:MINT-1669916 STRING:P54351 PaxDb:P54351 PRIDE:P54351
EnsemblMetazoa:FBtr0082883 GeneID:41694 KEGG:dme:Dmel_CG33101
CTD:41694 FlyBase:FBgn0013998 InParanoid:P54351 OMA:IFTLRTH
PhylomeDB:P54351 GenomeRNAi:41694 NextBio:825088 Bgee:P54351
GermOnline:CG33101 Uniprot:P54351
Length = 752
Score = 132 (51.5 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 52/210 (24%), Positives = 100/210 (47%)
Query: 234 EFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLGNVTRDSDLRTLLLST 293
E +++G +G LLYGPPGTGK+ + + L + + ++ N + D + + S
Sbjct: 248 ELVEQLGIKHVKGILLYGPPGTGKTLMARQIGTML--NAREPKIVNGPQILD-KYVGESE 304
Query: 294 GNRSILVIEDIDCSVDLPDRRNGNENNADAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGL 353
N I + + ++R G + A+ K + AG G H ++ L
Sbjct: 305 AN-----IRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAICKARGSVAGNSGVHDTVVNQL 359
Query: 354 LNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYCGPYG-FRLLAANYL 412
L IDG+ + +++ TN ++ +D ALLRPGR+++ + +S G ++L +
Sbjct: 360 LAKIDGVEQL--NNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQILNIHTK 417
Query: 413 GITDCEHKLVAEI---ETLLKTINITPAQV 439
+ D +K+ +++ E KT N + A++
Sbjct: 418 RMRDF-NKIASDVDNNEIAAKTKNFSGAEL 446
>UNIPROTKB|E2R4F3 [details] [associations]
symbol:SPG7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008089 "anterograde axon cargo transport"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0008089
GO:GO:0030163 GeneTree:ENSGT00530000063070 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 CTD:6687 KO:K09552 OMA:MMDHEAK
EMBL:AAEX03003953 EMBL:AAEX03003954 RefSeq:XP_546777.3
Ensembl:ENSCAFT00000031561 GeneID:489657 KEGG:cfa:489657
NextBio:20862809 Uniprot:E2R4F3
Length = 793
Score = 100 (40.3 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 330 AAVRKNKTDFAG-GKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPG 388
A +K T +G + TL+ LL +DG+ ++ D I++ +TN + LD ALLRPG
Sbjct: 412 AVGKKRSTTMSGFSNTEEEQTLNQLLVEMDGMGTT--DHVIVLASTNRADILDNALLRPG 469
Query: 389 RMDMHI 394
R+D H+
Sbjct: 470 RLDRHV 475
Score = 80 (33.2 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 202 KLEHPATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLV 261
K+ +F +A + K + E +D +++ E + ++G +G LL GPPG GK+ L
Sbjct: 301 KMGKGVSFKDVAGMHEAKLEVKEFVD-YLKSPERFLQLGAKVPKGALLLGPPGCGKTLLA 359
Query: 262 AAMA 265
A+A
Sbjct: 360 KAVA 363
>MGI|MGI:1928277 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=ISA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IGI] [GO:0008053 "mitochondrial fusion" evidence=IGI]
[GO:0008152 "metabolic process" evidence=ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IGI] [GO:0042407 "cristae formation" evidence=IGI]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1928277
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0031966
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 EMBL:AK012394 EMBL:AK159647 EMBL:AK167964
EMBL:AK168244 EMBL:BC056978 EMBL:AF329695 IPI:IPI00468514
IPI:IPI00652659 RefSeq:NP_473411.2 UniGene:Mm.287475
ProteinModelPortal:Q920A7 SMR:Q920A7 IntAct:Q920A7 STRING:Q920A7
MEROPS:M41.016 PhosphoSite:Q920A7 PaxDb:Q920A7 PRIDE:Q920A7
Ensembl:ENSMUST00000001520 Ensembl:ENSMUST00000098320 GeneID:114896
KEGG:mmu:114896 UCSC:uc009nwd.2 CTD:114896 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 InParanoid:Q920A7 KO:K08956 OMA:WDEKDFR
OrthoDB:EOG4SBDXC NextBio:368917 Bgee:Q920A7 CleanEx:MM_AFG3L1
Genevestigator:Q920A7 GermOnline:ENSMUSG00000031967 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
Uniprot:Q920A7
Length = 789
Score = 98 (39.6 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 27/69 (39%), Positives = 36/69 (52%)
Query: 333 RKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDM 392
RK GG+ + TL+ +L +DG SS +++ TN + LDPAL RPGR D
Sbjct: 406 RKRGRGHLGGQSEQENTLNQMLVEMDGFNSSTNV--VVLAGTNRPDILDPALTRPGRFDR 463
Query: 393 HIHMSYCGP 401
I Y GP
Sbjct: 464 QI---YIGP 469
Score = 82 (33.9 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 217 DLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMA 265
+ K IME ++ F++ + Y+ +G +G +L GPPGTGK+ L A A
Sbjct: 307 EAKLEIMEFVN-FLKNPKQYQDLGAKIPKGAMLTGPPGTGKTLLAKATA 354
>UNIPROTKB|F1LZ09 [details] [associations]
symbol:F1LZ09 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR005937 Pfam:PF00004 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00780208
Ensembl:ENSRNOT00000039743 Uniprot:F1LZ09
Length = 369
Score = 92 (37.4 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 219 KATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYL 268
K + E ++ + E YK++G RG L+YGPPG GK+ L +A+++
Sbjct: 123 KQEVWEAMELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKTVAHHM 172
Score = 80 (33.2 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 353 LLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
LLN +DG + + I+ TN K+ LDP LLRPG +D I
Sbjct: 241 LLNQMDGFDQNISVKAIMA--TNRKDTLDPTLLRPGHLDHKI 280
>ZFIN|ZDB-GENE-070912-46 [details] [associations]
symbol:afg3l2 "AFG3 ATPase family gene 3-like 2 (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-070912-46 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:10939 MEROPS:M41.007 EMBL:BX000484 EMBL:BC155655
IPI:IPI00513225 RefSeq:NP_001104667.1 UniGene:Dr.82691 SMR:A9JRG9
STRING:A9JRG9 Ensembl:ENSDART00000089834 GeneID:569168
KEGG:dre:569168 NextBio:20889547 Uniprot:A9JRG9
Length = 800
Score = 97 (39.2 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 25/69 (36%), Positives = 39/69 (56%)
Query: 333 RKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDM 392
++ + +F GG+ + TL+ LL +DG + +++ TN + LDPAL+RPGR D
Sbjct: 410 KRGRGNF-GGQSEQENTLNQLLVEMDGF--NTATNVVVLAGTNRPDILDPALMRPGRFDR 466
Query: 393 HIHMSYCGP 401
I Y GP
Sbjct: 467 QI---YIGP 472
Score = 83 (34.3 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 21/57 (36%), Positives = 33/57 (57%)
Query: 209 FDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMA 265
F +A + K IME ++ F++ + Y+ +G +G +L GPPGTGK+ L A A
Sbjct: 302 FKDVAGCEEAKLEIMEFVN-FLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATA 357
>ZFIN|ZDB-GENE-030131-5408 [details] [associations]
symbol:vcp "valosin containing protein"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0035861 "site of double-strand
break" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
[GO:2000058 "regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-030131-5408 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0006810 EMBL:CR318632 GO:GO:0016567 GO:GO:0007049
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK GeneTree:ENSGT00700000104534
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:AB093594 EMBL:AY576993 EMBL:BC050488 EMBL:BC067384
IPI:IPI00505091 RefSeq:NP_958889.1 UniGene:Dr.75122
ProteinModelPortal:Q7ZU99 SMR:Q7ZU99 STRING:Q7ZU99 PRIDE:Q7ZU99
Ensembl:ENSDART00000023779 GeneID:327197 KEGG:dre:327197
InParanoid:Q76KA4 NextBio:20809924 Bgee:Q7ZU99 Uniprot:Q7ZU99
Length = 806
Score = 98 (39.6 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 220 ATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
A I E ++ +R +K +G RG LLYGPPGTGK+ + A+AN
Sbjct: 214 AQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Score = 87 (35.7 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 22/72 (30%), Positives = 38/72 (52%)
Query: 195 AIRWDSVKLEHPATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPG 254
A+R V++ + T++ + D+K + E + V + + + G +G L YGPPG
Sbjct: 463 ALRETVVEVPN-ITWEDIGGLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPG 521
Query: 255 TGKSSLVAAMAN 266
GK+ L A+AN
Sbjct: 522 CGKTLLAKAIAN 533
Score = 82 (33.9 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 25/75 (33%), Positives = 40/75 (53%)
Query: 322 DAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLD 381
D+ +KA G N D GG ++ + +L +DG+ S I+ TN + +D
Sbjct: 580 DSIAKARGG----NVGD-GGGAADRVI--NQILTEMDGMSSK--KNVFIIGATNRPDIID 630
Query: 382 PALLRPGRMDMHIHM 396
PA+LRPGR+D I++
Sbjct: 631 PAILRPGRLDQLIYI 645
>FB|FBgn0035443 [details] [associations]
symbol:CG12010 species:7227 "Drosophila melanogaster"
[GO:0005783 "endoplasmic reticulum" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0006200 GO:GO:0016887 HSSP:Q01853
UniGene:Dm.11249 GeneID:38421 KEGG:dme:Dmel_CG12010
FlyBase:FBgn0035443 GenomeRNAi:38421 NextBio:808578
RefSeq:NP_647812.1 ProteinModelPortal:Q9VZQ0 SMR:Q9VZQ0
IntAct:Q9VZQ0 MINT:MINT-874256 STRING:Q9VZQ0 PRIDE:Q9VZQ0
UCSC:CG12010-RA InParanoid:Q9VZQ0 OMA:GCAKTTI PhylomeDB:Q9VZQ0
ArrayExpress:Q9VZQ0 Bgee:Q9VZQ0 Uniprot:Q9VZQ0
Length = 736
Score = 129 (50.5 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 52/192 (27%), Positives = 84/192 (43%)
Query: 207 ATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
A F+ + LK T+ + +R+ + R G + +G LLYGPPG K+++ +A
Sbjct: 466 AGFEVIGGMEALKRTLQVSVLAGIRQSAAFARFGLSLPKGVLLYGPPGCAKTTVAKCLAK 525
Query: 267 YLKFDVFDLQLGNVTRDSDLRTLLLSTGNRSILVIEDIDCSVDLPDRRNGNENNADAQSK 326
+ D+ + T +++ + + R I I D R+N
Sbjct: 526 --EADMTFI----ATSAAEVYSPYVGCAERFISRIFDTA-------RKNAP---CLIFLD 569
Query: 327 AAGAAVRKNKTDFAGGKGQHMLT-LSGLLNFIDGLWSSCGDERIIVFT-TNHKERLDPAL 384
+ V + GG GQ L LS LL ++G+ + I+V TN + +D AL
Sbjct: 570 EIDSLVGRRTVSSGGGGGQVQLRILSTLLTEMNGIVGGGSQQHILVVAATNRPDMIDDAL 629
Query: 385 LRPGRMDMHIHM 396
LRPGR D IH+
Sbjct: 630 LRPGRFDKLIHV 641
Score = 48 (22.0 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 37/150 (24%), Positives = 64/150 (42%)
Query: 1 MLSTENIPSASTLFATYASMTASLMLFRSMANDFLPEPVRNYACFAFRYFFKPRSKELTL 60
+L T I S S F T A + + +S L E +R ++C F+ S+ L
Sbjct: 207 LLETSKI-SFSHRFPTTALVVGPVDCGKS---GLLSEFLRRHSC---NCFYITASQVLRS 259
Query: 61 VIEDSNGIARNQIFEAAEAYLSAKIGPSIERLKICKTPNEKVITIRLEKNEQIIDSFRGV 120
++ R +IF+AA+ + K+ P +C T + I + I+ +
Sbjct: 260 YPGETEEELR-RIFQAAQTF-KEKLRPLCNFHSVCFTFEILISFIFIVP---IVILIEDL 314
Query: 121 QLRWRFALVEAADGKGNSHSMRPEKRLFEL 150
+L V AD K +S+S+R L++L
Sbjct: 315 ELLCPSTAV--ADAKNSSNSLRISAELYKL 342
>RGD|1309722 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=ISO] [GO:0008053 "mitochondrial fusion"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=ISO] [GO:0042407
"cristae formation" evidence=ISO] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1309722
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
IPI:IPI00365343 Ensembl:ENSRNOT00000065957 UCSC:RGD:1309722
ArrayExpress:F1LS61 Uniprot:F1LS61
Length = 761
Score = 95 (38.5 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 26/69 (37%), Positives = 36/69 (52%)
Query: 333 RKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDM 392
RK GG+ + TL+ +L +DG S+ +++ TN + LDPAL RPGR D
Sbjct: 378 RKRGRGHLGGQSEQENTLNQMLVEMDGFNSTTNV--VVLAGTNRPDILDPALTRPGRFDR 435
Query: 393 HIHMSYCGP 401
I Y GP
Sbjct: 436 QI---YIGP 441
Score = 84 (34.6 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 217 DLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLK 269
+ K IME ++ F++ + Y+ +G +G +L GPPGTGK+ L A A K
Sbjct: 279 EAKLEIMEFVN-FLKNPKQYQDLGAKIPKGAMLTGPPGTGKTLLAKATAGEAK 330
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 99 (39.9 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 217 DLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
++K ++E + V E +++ G + RG L YGPPGTGK+ L A+AN
Sbjct: 506 EVKRELIESVQYPVDHPEKFQKFGLSPSRGVLFYGPPGTGKTMLAKAVAN 555
Score = 99 (39.9 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 31/105 (29%), Positives = 50/105 (47%)
Query: 220 ATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLGN 279
A I E ++ +R + +K +G RG L+YGPPGTGK+ + A+AN F +
Sbjct: 235 AQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPE 294
Query: 280 VTR------DSDLRTLLLSTGNRS--ILVIEDIDCSVDLPDRRNG 316
+ +S+LR S I+ I++ID ++ NG
Sbjct: 295 IMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTNG 339
Score = 83 (34.3 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 322 DAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLD 381
D+ +K+ G +V AGG ++ + LL +DG+ S ++ TN E+LD
Sbjct: 602 DSIAKSRGGSVGD-----AGGASDRVV--NQLLTEMDGMTSK--KNVFVIGATNRPEQLD 652
Query: 382 PALLRPGRMDMHIHM 396
AL+RPGR+D +++
Sbjct: 653 AALVRPGRLDTLVYV 667
Score = 73 (30.8 bits), Expect = 0.00053, Sum P(3) = 0.00053
Identities = 30/102 (29%), Positives = 49/102 (48%)
Query: 331 AVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRM 390
A ++ KT+ G+ + + +S LL +DG+ +++ TN +DPAL R GR
Sbjct: 331 APKREKTN---GEVERRV-VSQLLTLMDGM--KARSNVVVMAATNRPNSIDPALRRFGRF 384
Query: 391 DMHIHMSYCGPYGFRLLAANYLGITDCEHKLVAEIETLLKTI 432
D + + P G RL L I KL +++ L+TI
Sbjct: 385 DREVDIGIPDPTG-RL---EILSIHTKNMKLGEDVD--LETI 420
Score = 39 (18.8 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 67 GIARNQIFEAAEAYLSAKIGPSIERLKICKTPNEKVIT 104
G+ Q +A+ A ++ S LK K PN ++T
Sbjct: 13 GVHFLQFLDASGAEKKEELDTSTAILKKKKKPNSLIVT 50
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 100 (40.3 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 32/105 (30%), Positives = 50/105 (47%)
Query: 220 ATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLGN 279
A I E ++ +R + +K +G RG LL+GPPGTGK+ + A+AN F +
Sbjct: 220 AQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVANETGSFFFLINGPE 279
Query: 280 VTR------DSDLRTLL--LSTGNRSILVIEDIDCSVDLPDRRNG 316
V +S+LR +IL I++ID ++ NG
Sbjct: 280 VMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKREKTNG 324
Score = 90 (36.7 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 23/65 (35%), Positives = 33/65 (50%)
Query: 203 LEHP-ATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLV 261
+E P T+ + ++K + E + V E Y + G RG L YGPPG GK+ L
Sbjct: 475 VETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLA 534
Query: 262 AAMAN 266
A+AN
Sbjct: 535 KAIAN 539
Score = 79 (32.9 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 21/68 (30%), Positives = 37/68 (54%)
Query: 331 AVRKNKTDFAGGKGQHML--TLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPG 388
++ K + AGG G ++ +L +DG+ + I+ TN + +DPA+LRPG
Sbjct: 587 SIAKARGGGAGGDGGGASDRVINQVLTEMDGM--NAKKNVFIIGATNRPDIIDPAVLRPG 644
Query: 389 RMDMHIHM 396
R+D I++
Sbjct: 645 RLDQLIYI 652
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 100 (40.3 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 32/105 (30%), Positives = 50/105 (47%)
Query: 220 ATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLGN 279
A I E ++ +R + +K +G RG LL+GPPGTGK+ + A+AN F +
Sbjct: 220 AQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVANETGSFFFLINGPE 279
Query: 280 VTR------DSDLRTLL--LSTGNRSILVIEDIDCSVDLPDRRNG 316
V +S+LR +IL I++ID ++ NG
Sbjct: 280 VMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKREKTNG 324
Score = 90 (36.7 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 23/65 (35%), Positives = 33/65 (50%)
Query: 203 LEHP-ATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLV 261
+E P T+ + ++K + E + V E Y + G RG L YGPPG GK+ L
Sbjct: 475 VETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLA 534
Query: 262 AAMAN 266
A+AN
Sbjct: 535 KAIAN 539
Score = 79 (32.9 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 21/68 (30%), Positives = 37/68 (54%)
Query: 331 AVRKNKTDFAGGKGQHML--TLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPG 388
++ K + AGG G ++ +L +DG+ + I+ TN + +DPA+LRPG
Sbjct: 587 SIAKARGGGAGGDGGGASDRVINQVLTEMDGM--NAKKNVFIIGATNRPDIIDPAVLRPG 644
Query: 389 RMDMHIHM 396
R+D I++
Sbjct: 645 RLDQLIYI 652
>UNIPROTKB|E1BTS8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00700000104534 EMBL:AADN02060646 EMBL:AADN02060647
EMBL:AADN02060648 EMBL:AADN02060649 EMBL:AADN02060650
EMBL:AADN02060651 EMBL:AADN02060652 EMBL:AADN02060653
IPI:IPI00823321 Ensembl:ENSGALT00000039430 ArrayExpress:E1BTS8
Uniprot:E1BTS8
Length = 804
Score = 98 (39.6 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 220 ATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
A I E ++ +R +K +G RG LLYGPPGTGK+ + A+AN
Sbjct: 214 AQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Score = 87 (35.7 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 203 LEHP-ATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLV 261
+E P T++ + D+K + E + V + + + G +G L YGPPG GK+ L
Sbjct: 467 VEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLA 526
Query: 262 AAMAN 266
A+AN
Sbjct: 527 KAIAN 531
Score = 81 (33.6 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 25/75 (33%), Positives = 40/75 (53%)
Query: 322 DAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLD 381
D+ +KA G N D GG ++ + +L +DG+ S I+ TN + +D
Sbjct: 578 DSIAKARGG----NIGD-GGGAADRVI--NQILTEMDGM--STKKNVFIIGATNRPDIID 628
Query: 382 PALLRPGRMDMHIHM 396
PA+LRPGR+D I++
Sbjct: 629 PAILRPGRLDQLIYI 643
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 98 (39.6 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 220 ATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
A I E ++ +R +K +G RG LLYGPPGTGK+ + A+AN
Sbjct: 214 AQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Score = 87 (35.7 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 203 LEHP-ATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLV 261
+E P T++ + D+K + E + V + + + G +G L YGPPG GK+ L
Sbjct: 469 VEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLA 528
Query: 262 AAMAN 266
A+AN
Sbjct: 529 KAIAN 533
Score = 81 (33.6 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 25/75 (33%), Positives = 40/75 (53%)
Query: 322 DAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLD 381
D+ +KA G N D GG ++ + +L +DG+ S I+ TN + +D
Sbjct: 580 DSIAKARGG----NIGD-GGGAADRVI--NQILTEMDGM--SIKKNVFIIGATNRPDIID 630
Query: 382 PALLRPGRMDMHIHM 396
PA+LRPGR+D I++
Sbjct: 631 PAILRPGRLDQLIYI 645
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 98 (39.6 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 220 ATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
A I E ++ +R +K +G RG LLYGPPGTGK+ + A+AN
Sbjct: 214 AQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Score = 87 (35.7 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 203 LEHP-ATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLV 261
+E P T++ + D+K + E + V + + + G +G L YGPPG GK+ L
Sbjct: 469 VEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLA 528
Query: 262 AAMAN 266
A+AN
Sbjct: 529 KAIAN 533
Score = 81 (33.6 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 25/75 (33%), Positives = 40/75 (53%)
Query: 322 DAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLD 381
D+ +KA G N D GG ++ + +L +DG+ S I+ TN + +D
Sbjct: 580 DSIAKARGG----NIGD-GGGAADRVI--NQILTEMDGM--STKKNVFIIGATNRPDIID 630
Query: 382 PALLRPGRMDMHIHM 396
PA+LRPGR+D I++
Sbjct: 631 PAILRPGRLDQLIYI 645
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 98 (39.6 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 220 ATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
A I E ++ +R +K +G RG LLYGPPGTGK+ + A+AN
Sbjct: 214 AQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Score = 87 (35.7 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 203 LEHP-ATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLV 261
+E P T++ + D+K + E + V + + + G +G L YGPPG GK+ L
Sbjct: 469 VEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLA 528
Query: 262 AAMAN 266
A+AN
Sbjct: 529 KAIAN 533
Score = 81 (33.6 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 25/75 (33%), Positives = 40/75 (53%)
Query: 322 DAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLD 381
D+ +KA G N D GG ++ + +L +DG+ S I+ TN + +D
Sbjct: 580 DSIAKARGG----NIGD-GGGAADRVI--NQILTEMDGM--STKKNVFIIGATNRPDIID 630
Query: 382 PALLRPGRMDMHIHM 396
PA+LRPGR+D I++
Sbjct: 631 PAILRPGRLDQLIYI 645
>UNIPROTKB|Q3ZBT1 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
Length = 806
Score = 98 (39.6 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 220 ATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
A I E ++ +R +K +G RG LLYGPPGTGK+ + A+AN
Sbjct: 214 AQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Score = 87 (35.7 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 203 LEHP-ATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLV 261
+E P T++ + D+K + E + V + + + G +G L YGPPG GK+ L
Sbjct: 469 VEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLA 528
Query: 262 AAMAN 266
A+AN
Sbjct: 529 KAIAN 533
Score = 81 (33.6 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 25/75 (33%), Positives = 40/75 (53%)
Query: 322 DAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLD 381
D+ +KA G N D GG ++ + +L +DG+ S I+ TN + +D
Sbjct: 580 DSIAKARGG----NIGD-GGGAADRVI--NQILTEMDGM--STKKNVFIIGATNRPDIID 630
Query: 382 PALLRPGRMDMHIHM 396
PA+LRPGR+D I++
Sbjct: 631 PAILRPGRLDQLIYI 645
>UNIPROTKB|P55072 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;TAS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA;NAS] [GO:0042981 "regulation of
apoptotic process" evidence=TAS] [GO:0045184 "establishment of
protein localization" evidence=TAS] [GO:0019985 "translesion
synthesis" evidence=IMP] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IMP] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0019903 "protein phosphatase binding" evidence=IPI] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0031334
GO:GO:0051260 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0006919 EMBL:CH471071 GO:GO:0030433 GO:GO:0006302
GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279 GO:GO:0031593
GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 Orphanet:803 PDB:3TIW
PDBsum:3TIW GO:GO:0030968 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 TCDB:3.A.16.1.1 GO:GO:0070842 GO:GO:0035861
GO:GO:0019985 EMBL:AC004472 EMBL:AL353795 PDB:3QC8 PDB:3QQ8
PDB:3QWZ PDBsum:3QC8 PDBsum:3QQ8 PDBsum:3QWZ HOVERGEN:HBG001226
PDB:3EBB PDBsum:3EBB CTD:7415 OrthoDB:EOG45TCMK EMBL:AF100752
EMBL:AK312310 EMBL:BC110913 EMBL:BC121794 EMBL:Z70768
IPI:IPI00022774 PIR:T02243 RefSeq:NP_009057.1 UniGene:Hs.529782
PDB:3HU1 PDB:3HU2 PDB:3HU3 PDB:3QQ7 PDBsum:3HU1 PDBsum:3HU2
PDBsum:3HU3 PDBsum:3QQ7 ProteinModelPortal:P55072 SMR:P55072
DIP:DIP-33543N IntAct:P55072 MINT:MINT-272884 STRING:P55072
PhosphoSite:P55072 DMDM:6094447 DOSAC-COBS-2DPAGE:P55072 OGP:P55072
REPRODUCTION-2DPAGE:IPI00022774 REPRODUCTION-2DPAGE:P55072
PaxDb:P55072 PRIDE:P55072 Ensembl:ENST00000358901 GeneID:7415
KEGG:hsa:7415 UCSC:uc003zvy.2 GeneCards:GC09M035056 HGNC:HGNC:12666
HPA:CAB005593 HPA:HPA012728 HPA:HPA012814 MIM:167320 MIM:601023
MIM:613954 neXtProt:NX_P55072 Orphanet:52430 PharmGKB:PA37289
InParanoid:P55072 BindingDB:P55072 ChEMBL:CHEMBL1075145 ChiTaRS:VCP
EvolutionaryTrace:P55072 GenomeRNAi:7415 NextBio:29034
ArrayExpress:P55072 Bgee:P55072 CleanEx:HS_VCP
Genevestigator:P55072 GermOnline:ENSG00000165280 Uniprot:P55072
Length = 806
Score = 98 (39.6 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 220 ATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
A I E ++ +R +K +G RG LLYGPPGTGK+ + A+AN
Sbjct: 214 AQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Score = 87 (35.7 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 203 LEHP-ATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLV 261
+E P T++ + D+K + E + V + + + G +G L YGPPG GK+ L
Sbjct: 469 VEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLA 528
Query: 262 AAMAN 266
A+AN
Sbjct: 529 KAIAN 533
Score = 81 (33.6 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 25/75 (33%), Positives = 40/75 (53%)
Query: 322 DAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLD 381
D+ +KA G N D GG ++ + +L +DG+ S I+ TN + +D
Sbjct: 580 DSIAKARGG----NIGD-GGGAADRVI--NQILTEMDGM--STKKNVFIIGATNRPDIID 630
Query: 382 PALLRPGRMDMHIHM 396
PA+LRPGR+D I++
Sbjct: 631 PAILRPGRLDQLIYI 645
>MGI|MGI:99919 [details] [associations]
symbol:Vcp "valosin containing protein" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=ISO] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0019985 "translesion synthesis" evidence=ISO]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISO] [GO:0031334 "positive regulation of protein complex
assembly" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0035861 "site of double-strand break" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043531 "ADP
binding" evidence=ISO] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISO] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0070842 "aggresome assembly"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:99919 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 GO:GO:0031334 GO:GO:0051260 GO:GO:0016887
GO:GO:0016567 GO:GO:0008289 GO:GO:0006919 GO:GO:0030433
GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279
GO:GO:0031593 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 GeneTree:ENSGT00700000104534 EMBL:AL672276
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 PDB:2PJH PDBsum:2PJH
PDB:1S3S PDBsum:1S3S HOVERGEN:HBG001226 CTD:7415 OrthoDB:EOG45TCMK
ChiTaRS:VCP EMBL:Z14044 EMBL:AK028264 EMBL:AK030751 EMBL:AK149931
EMBL:AK151109 EMBL:AK151418 EMBL:AK153249 EMBL:AK159177
EMBL:AK159509 EMBL:AK167794 EMBL:AK169140 EMBL:BC043053
EMBL:BC049114 IPI:IPI00622235 PIR:S25197 RefSeq:NP_033529.3
UniGene:Mm.245976 PDB:1E32 PDB:1R7R PDB:3CF0 PDB:3CF1 PDB:3CF2
PDB:3CF3 PDBsum:1E32 PDBsum:1R7R PDBsum:3CF0 PDBsum:3CF1
PDBsum:3CF2 PDBsum:3CF3 DisProt:DP00435 ProteinModelPortal:Q01853
SMR:Q01853 DIP:DIP-29796N IntAct:Q01853 MINT:MINT-220770
STRING:Q01853 PhosphoSite:Q01853 REPRODUCTION-2DPAGE:Q01853
UCD-2DPAGE:Q01853 PaxDb:Q01853 PRIDE:Q01853
Ensembl:ENSMUST00000030164 GeneID:269523 KEGG:mmu:269523
UCSC:uc008sor.2 InParanoid:Q01853 BindingDB:Q01853
EvolutionaryTrace:Q01853 NextBio:392876 Bgee:Q01853 CleanEx:MM_VCP
Genevestigator:Q01853 GermOnline:ENSMUSG00000028452 Uniprot:Q01853
Length = 806
Score = 98 (39.6 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 220 ATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
A I E ++ +R +K +G RG LLYGPPGTGK+ + A+AN
Sbjct: 214 AQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Score = 87 (35.7 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 203 LEHP-ATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLV 261
+E P T++ + D+K + E + V + + + G +G L YGPPG GK+ L
Sbjct: 469 VEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLA 528
Query: 262 AAMAN 266
A+AN
Sbjct: 529 KAIAN 533
Score = 81 (33.6 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 25/75 (33%), Positives = 40/75 (53%)
Query: 322 DAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLD 381
D+ +KA G N D GG ++ + +L +DG+ S I+ TN + +D
Sbjct: 580 DSIAKARGG----NIGD-GGGAADRVI--NQILTEMDGM--STKKNVFIIGATNRPDIID 630
Query: 382 PALLRPGRMDMHIHM 396
PA+LRPGR+D I++
Sbjct: 631 PAILRPGRLDQLIYI 645
>RGD|621595 [details] [associations]
symbol:Vcp "valosin-containing protein" species:10116 "Rattus
norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO;ISS] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0018279 "protein N-linked glycosylation via asparagine"
evidence=ISO;ISS] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
evidence=ISO;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISO;ISS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA;ISO] [GO:0031334 "positive
regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;IMP] [GO:0035861 "site of double-strand
break" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043531 "ADP binding" evidence=IMP] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=IDA] [GO:0070842
"aggresome assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 RGD:621595 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0031334 GO:GO:0051260 GO:GO:0005102 GO:GO:0016887
GO:GO:0016567 GO:GO:0042802 GO:GO:0008289 GO:GO:0006919
GO:GO:0030433 GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464
GO:GO:0018279 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:U11760 EMBL:BC060518
IPI:IPI00212014 PIR:A55190 RefSeq:NP_446316.1 UniGene:Rn.98891
ProteinModelPortal:P46462 SMR:P46462 IntAct:P46462
MINT:MINT-1954391 STRING:P46462 PhosphoSite:P46462
World-2DPAGE:0004:P46462 PRIDE:P46462 Ensembl:ENSRNOT00000046102
GeneID:116643 KEGG:rno:116643 UCSC:RGD:621595 InParanoid:P46462
NextBio:619375 Genevestigator:P46462 GermOnline:ENSRNOG00000034242
Uniprot:P46462
Length = 806
Score = 98 (39.6 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 220 ATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
A I E ++ +R +K +G RG LLYGPPGTGK+ + A+AN
Sbjct: 214 AQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Score = 87 (35.7 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 203 LEHP-ATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLV 261
+E P T++ + D+K + E + V + + + G +G L YGPPG GK+ L
Sbjct: 469 VEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLA 528
Query: 262 AAMAN 266
A+AN
Sbjct: 529 KAIAN 533
Score = 81 (33.6 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 25/75 (33%), Positives = 40/75 (53%)
Query: 322 DAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLD 381
D+ +KA G N D GG ++ + +L +DG+ S I+ TN + +D
Sbjct: 580 DSIAKARGG----NIGD-GGGAADRVI--NQILTEMDGM--STKKNVFIIGATNRPDIID 630
Query: 382 PALLRPGRMDMHIHM 396
PA+LRPGR+D I++
Sbjct: 631 PAILRPGRLDQLIYI 645
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 98 (39.6 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 220 ATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
A I E ++ +R +K +G RG LLYGPPGTGK+ + A+AN
Sbjct: 214 AQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Score = 81 (33.6 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 25/75 (33%), Positives = 40/75 (53%)
Query: 322 DAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLD 381
D+ +KA G N D GG ++ + +L +DG+ S I+ TN + +D
Sbjct: 580 DSIAKARGG----NIGD-GGGAADRVI--NQILTEMDGM--STKKNVFIIGATNRPDIID 630
Query: 382 PALLRPGRMDMHIHM 396
PA+LRPGR+D I++
Sbjct: 631 PAILRPGRLDQLIYI 645
>UNIPROTKB|F1SIH8 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:FP102396 Ensembl:ENSSSCT00000005837 ArrayExpress:F1SIH8
Uniprot:F1SIH8
Length = 808
Score = 98 (39.6 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 220 ATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
A I E ++ +R +K +G RG LLYGPPGTGK+ + A+AN
Sbjct: 214 AQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Score = 87 (35.7 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 203 LEHP-ATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLV 261
+E P T++ + D+K + E + V + + + G +G L YGPPG GK+ L
Sbjct: 469 VEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLA 528
Query: 262 AAMAN 266
A+AN
Sbjct: 529 KAIAN 533
Score = 81 (33.6 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 25/75 (33%), Positives = 40/75 (53%)
Query: 322 DAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLD 381
D+ +KA G N D GG ++ + +L +DG+ S I+ TN + +D
Sbjct: 580 DSIAKARGG----NIGD-GGGAADRVI--NQILTEMDGM--STKKNVFIIGATNRPDIID 630
Query: 382 PALLRPGRMDMHIHM 396
PA+LRPGR+D I++
Sbjct: 631 PAILRPGRLDQLIYI 645
>UNIPROTKB|F1P4V8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:AADN02060646 EMBL:AADN02060647 EMBL:AADN02060648
EMBL:AADN02060649 EMBL:AADN02060650 EMBL:AADN02060651
EMBL:AADN02060652 EMBL:AADN02060653 IPI:IPI00585183
Ensembl:ENSGALT00000003093 ArrayExpress:F1P4V8 Uniprot:F1P4V8
Length = 810
Score = 98 (39.6 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 220 ATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
A I E ++ +R +K +G RG LLYGPPGTGK+ + A+AN
Sbjct: 214 AQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Score = 87 (35.7 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 203 LEHP-ATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLV 261
+E P T++ + D+K + E + V + + + G +G L YGPPG GK+ L
Sbjct: 473 VEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLA 532
Query: 262 AAMAN 266
A+AN
Sbjct: 533 KAIAN 537
Score = 81 (33.6 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 25/75 (33%), Positives = 40/75 (53%)
Query: 322 DAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLD 381
D+ +KA G N D GG ++ + +L +DG+ S I+ TN + +D
Sbjct: 584 DSIAKARGG----NIGD-GGGAADRVI--NQILTEMDGM--STKKNVFIIGATNRPDIID 634
Query: 382 PALLRPGRMDMHIHM 396
PA+LRPGR+D I++
Sbjct: 635 PAILRPGRLDQLIYI 649
WARNING: HSPs involving 97 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.394 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 525 497 0.00084 119 3 11 22 0.39 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 347
No. of states in DFA: 616 (65 KB)
Total size of DFA: 285 KB (2150 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 40.14u 0.10s 40.24t Elapsed: 00:00:02
Total cpu time: 40.17u 0.10s 40.27t Elapsed: 00:00:02
Start: Sat May 11 04:02:16 2013 End: Sat May 11 04:02:18 2013
WARNINGS ISSUED: 2