BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009791
(525 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54DY9|BCS1B_DICDI Probable mitochondrial chaperone BCS1-B OS=Dictyostelium discoideum
GN=bcsl1b PE=3 SV=1
Length = 458
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 147/280 (52%), Gaps = 18/280 (6%)
Query: 193 YDAIRWDSVKLEHPA---TFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLL 249
Y ++ D + HP ++ ++ I++D+ +F+ ++Y G ++RGYLL
Sbjct: 187 YTSMGTDWRRFGHPRRKRPISSVILDKGKSELIIQDVKKFLNNSDWYNDRGIPYRRGYLL 246
Query: 250 YGPPGTGKSSLVAAMANYLKFDVFDLQL-GNVTRDSDLRTLLLSTGNRSILVIEDIDCSV 308
YGPPGTGKSS + A+A L+ + L L G D+ L LL + RSI+++EDID ++
Sbjct: 247 YGPPGTGKSSFITALAGELQLSICILNLAGKSVSDTSLNQLLATAPQRSIILLEDIDSAI 306
Query: 309 DLPDR-RNGNENNADAQSKAAGA----AVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSS 363
+ + N+A+A S ++G N + +GG LT SGLLN +DG+ +S
Sbjct: 307 QTGNHDLSAKSNSANAPSISSGGLQYQGYYGNPSVSSGGSA---LTFSGLLNALDGVAAS 363
Query: 364 CGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYCGPYGFRLLAANYLGITDCEHKLVA 423
G RI+ TTNH E+LD L+RPGR+D+ I + C Y + +L + L
Sbjct: 364 EG--RILFMTTNHLEKLDKVLIRPGRVDLQIEIGLCSSYQMEQM---FLKFYPTDFDLAK 418
Query: 424 EIETLLKTINITPAQVAEQFMKSEDADV-ALAALIKLLKE 462
+ L+ +PAQ+ FM + + A+ L +L+K+
Sbjct: 419 QFVEKLENYKFSPAQLQAYFMTYSNNSIEAINNLNELIKK 458
>sp|P32839|BCS1_YEAST Mitochondrial chaperone BCS1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=BCS1 PE=1 SV=2
Length = 456
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 128/242 (52%), Gaps = 33/242 (13%)
Query: 211 TLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKF 270
++ ++ +K I++D+ F++ ++Y G ++RGYLLYGPPG+GK+S + A+A L +
Sbjct: 227 SVILDSGIKEGILDDVYDFMKNGKWYSDRGIPYRRGYLLYGPPGSGKTSFIQALAGELDY 286
Query: 271 DVFDLQLG-NVTRDSDLRTLLLSTGNRSILVIEDIDCSVDLPDRRNGNENNADAQSKAAG 329
++ L L N D L L+ + RSIL++EDID +
Sbjct: 287 NICILNLSENNLTDDRLNHLMNNMPERSILLLEDIDAAF--------------------- 325
Query: 330 AAVRKNKTDFAGGKGQH-MLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPG 388
NK G +G H +T SGLLN +DG+ SS +E I TTNH E+LD A++RPG
Sbjct: 326 -----NKRSQTGEQGFHSSVTFSGLLNALDGVTSS--EETITFMTTNHPEKLDAAIMRPG 378
Query: 389 RMDMHIHMSYCGPYGF-RLLAANYLGITDCEHKLVAEIETLLKTINITPAQVAEQFMKSE 447
R+D + + PY ++ Y G TD K V ++ L I ++ AQ+ F+ ++
Sbjct: 379 RIDYKVFVGNATPYQVEKMFMKFYPGETDICKKFVNSVKEL--DITVSTAQLQGLFVMNK 436
Query: 448 DA 449
DA
Sbjct: 437 DA 438
>sp|Q9P6Q3|BCS1_SCHPO Probable mitochondrial chaperone bcs1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC644.07 PE=2 SV=1
Length = 449
Score = 119 bits (299), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 114/214 (53%), Gaps = 33/214 (15%)
Query: 205 HPAT---FDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLV 261
HP + ++ +E ++K I +D+ F+R ++Y G ++RGYLLYGPPG+GK+S +
Sbjct: 200 HPRSKRMLSSVVLESNVKKMITDDVHDFLRNSQWYDTRGIPYRRGYLLYGPPGSGKTSFL 259
Query: 262 AAMANYLKFDVFDLQLGNV-TRDSDLRTLLLSTGNRSILVIEDIDCSVDLPDRRNGNENN 320
A+A L +D+ L L D L LL + ++++++ED+D + +R
Sbjct: 260 YALAGELDYDICVLNLAEKGLTDDRLNHLLSNVPPKAVVLLEDVDSAFQGRER------- 312
Query: 321 ADAQSKAAGAAVRKNKTDFAGGKGQHM-LTLSGLLNFIDGLWSSCGDERIIVFTTNHKER 379
+G G H +T SGLLN +DG+ SS DERII TTNH E+
Sbjct: 313 -------------------SGEVGFHANVTFSGLLNALDGVTSS--DERIIFMTTNHPEK 351
Query: 380 LDPALLRPGRMDMHIHMSYCGPYGFRLLAANYLG 413
LDPAL+RPGR+D+ ++ P R + + G
Sbjct: 352 LDPALVRPGRVDVKAYLGNATPEQVREMFTRFYG 385
>sp|Q9Y276|BCS1_HUMAN Mitochondrial chaperone BCS1 OS=Homo sapiens GN=BCS1L PE=1 SV=1
Length = 419
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 124/246 (50%), Gaps = 26/246 (10%)
Query: 209 FDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYL 268
+++ ++ L I+ D+ F+ ++Y G ++RGYLLYGPPG GKSS + A+A L
Sbjct: 188 LNSVVLQQGLADRIVRDVQEFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGEL 247
Query: 269 KFDVFDLQLGNVTRDSDLRTLLLSTG-NRSILVIEDIDCSVDLPDRRNGNENNADAQSKA 327
+ + L L + + D LLS +S++++ED+D + R EN Q
Sbjct: 248 EHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAA--FLSRDLAVENPVKYQ--- 302
Query: 328 AGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRP 387
G LT SGLLN +DG+ S+ + RI+ TTNH +RLDPAL+RP
Sbjct: 303 ----------------GLGRLTFSGLLNALDGVAST--EARIVFMTTNHVDRLDPALIRP 344
Query: 388 GRMDMHIHMSYCGPYGF-RLLAANYLGITDCEHKLVAEIETLLKTINITPAQVAEQFMKS 446
GR+D+ ++ YC + ++ Y G + AE L T I+PAQV FM
Sbjct: 345 GRVDLKEYVGYCSHWQLTQMFQRFYPGQAPSLAENFAE-HVLRATNQISPAQVQGYFMLY 403
Query: 447 EDADVA 452
++ V
Sbjct: 404 KNDPVG 409
>sp|Q7ZV60|BCS1_DANRE Mitochondrial chaperone BCS1 OS=Danio rerio GN=bcs1l PE=2 SV=2
Length = 420
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 121/242 (50%), Gaps = 33/242 (13%)
Query: 209 FDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYL 268
++ +E + I++D+ F+ ++Y G ++RGYLLYGPPG GKSS + A+A L
Sbjct: 188 LSSVVLESGVAERIVDDVKEFIGNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGEL 247
Query: 269 KFDVFDLQLGNVTRDSDLRTLLLSTG-NRSILVIEDIDCSVD----LPDRRNGNENNADA 323
+ + + L + + D LLS +SI+++ED+D + LP EN
Sbjct: 248 GYSICLMSLSDRSLSDDRLNHLLSVAPQQSIILLEDVDAAFVSRELLP-----TENPLAY 302
Query: 324 QSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPA 383
Q G LT SGLLN +DG+ SS + RI+ TTN ERLDPA
Sbjct: 303 Q-------------------GMGRLTFSGLLNALDGVASS--EARIVFMTTNFIERLDPA 341
Query: 384 LLRPGRMDMHIHMSYCGPYGF-RLLAANYLGITDCEHKLVAEIETLLKTINITPAQVAEQ 442
L+RPGR+D+ ++ +C + ++ Y + E +E + L +++ AQV
Sbjct: 342 LVRPGRVDLKQYVGHCSHWQLTQMFRRFYPQESAAEADHFSE-QALAAHTDLSAAQVQGH 400
Query: 443 FM 444
FM
Sbjct: 401 FM 402
>sp|Q7ZTL7|BCS1_XENLA Mitochondrial chaperone BCS1 OS=Xenopus laevis GN=bcs1l PE=2 SV=1
Length = 419
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 124/247 (50%), Gaps = 25/247 (10%)
Query: 209 FDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYL 268
++ +E + I++D+ F+ ++Y G ++RGYLLYGPPG GKSS + A+A L
Sbjct: 188 LSSVVLEQGISEKIVQDVKGFIENPKWYSDRGIPYRRGYLLYGPPGCGKSSFITALAGEL 247
Query: 269 KFDVFDLQLGNVTRDSDLRTLLLSTG-NRSILVIEDIDCSVDLPDRRNGNENNADAQSKA 327
++ + + L + + D LLS +SI+++ED+D + R+ N+ N A
Sbjct: 248 EYSICLMSLSDSSLSDDRLNHLLSVAPQQSIILLEDVDAAF---VSRDLNKQNPTAY--- 301
Query: 328 AGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRP 387
+G LT SGLLN +DG+ S+ + RI+ TTNH +RLDPAL+RP
Sbjct: 302 ---------------QGMGRLTFSGLLNALDGVAST--EARIVFMTTNHIDRLDPALIRP 344
Query: 388 GRMDMHIHMSYCGPYGFRLLAANYLGITDCEHKLVAEIETLLKTINITPAQVAEQFMKSE 447
GR+D+ ++ +C + + + L + I+ AQV FM +
Sbjct: 345 GRVDVKQYVGHCTNWQLSQMFLRFYPDQTAGQSEAFASAALSSSDKISAAQVQGHFMMHK 404
Query: 448 -DADVAL 453
D D A+
Sbjct: 405 TDPDGAI 411
>sp|Q5E9H5|BCS1_BOVIN Mitochondrial chaperone BCS1 OS=Bos taurus GN=BCS1L PE=2 SV=1
Length = 419
Score = 109 bits (273), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 121/238 (50%), Gaps = 26/238 (10%)
Query: 209 FDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYL 268
+++ +E + I+ D+ F+ ++Y G ++RGYLLYGPPG GKSS + A+A L
Sbjct: 188 LNSVVLEQGVTERIVRDIREFIDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITALAGEL 247
Query: 269 KFDVFDLQLGNVTRDSDLRTLLLSTG-NRSILVIEDIDCSVDLPDRRNGNENNADAQSKA 327
+ + L L + + D LLS +S++++ED+D + R EN Q
Sbjct: 248 QHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAA--FLSRDLAAENPIKYQ--- 302
Query: 328 AGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRP 387
G LT SGLLN +DG+ S+ + RI+ TTNH +RLDPAL+RP
Sbjct: 303 ----------------GLGRLTFSGLLNALDGVAST--EARIVFMTTNHIDRLDPALIRP 344
Query: 388 GRMDMHIHMSYCGPYGF-RLLAANYLGITDCEHKLVAEIETLLKTINITPAQVAEQFM 444
GR+DM ++ +C + ++ Y G + A+ L T I+PAQV FM
Sbjct: 345 GRVDMKEYVGHCSRWQLTQMFQRFYPGQATSLAENFAD-RVLQATTQISPAQVQGYFM 401
>sp|Q9CZP5|BCS1_MOUSE Mitochondrial chaperone BCS1 OS=Mus musculus GN=Bcs1l PE=1 SV=1
Length = 418
Score = 108 bits (271), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 122/238 (51%), Gaps = 26/238 (10%)
Query: 209 FDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYL 268
D++ ++ L I++D+ F+ ++Y G ++RGYLLYGPPG GKSS + A+A L
Sbjct: 188 LDSVVLQQGLADRIVKDIREFIDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITALAGEL 247
Query: 269 KFDVFDLQLGNVTRDSDLRTLLLSTG-NRSILVIEDIDCSVDLPDRRNGNENNADAQSKA 327
+ + L L + + D LLS +S++++ED+D + R EN Q
Sbjct: 248 EHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAA--FLSRDLAVENPIKYQ--- 302
Query: 328 AGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRP 387
G LT SGLLN +DG+ S+ + RI+ TTN+ +RLDPAL+RP
Sbjct: 303 ----------------GLGRLTFSGLLNALDGVAST--EARIVFMTTNYIDRLDPALIRP 344
Query: 388 GRMDMHIHMSYCGPYGF-RLLAANYLGITDCEHKLVAEIETLLKTINITPAQVAEQFM 444
GR+D+ ++ YC + ++ Y G + AE L T I+PAQV FM
Sbjct: 345 GRVDLKEYVGYCSHWQLTQMFQRFYPGQAPSLAENFAE-HVLKATSEISPAQVQGYFM 401
>sp|Q54HY8|BCS1A_DICDI Probable mitochondrial chaperone BCS1-A OS=Dictyostelium discoideum
GN=bcs1la PE=3 SV=1
Length = 421
Score = 103 bits (256), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 103/191 (53%), Gaps = 23/191 (12%)
Query: 208 TFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANY 267
+ ++ + DLK+ ++ED+ F+ + +Y+ G ++RGYLLYG PG GKSSL+ A+A
Sbjct: 185 SLSSVILADDLKSKLIEDIKSFITNESWYRNRGIPYRRGYLLYGEPGNGKSSLINAIAGE 244
Query: 268 LKFDVFDLQLGNV-TRDSDLRTLLLSTGNRSILVIEDIDCSVDLPDRRNGNENNADAQSK 326
L D+ + L + D + LL + +SIL+IEDID + + +N D+ +
Sbjct: 245 LNLDICIVSLSSKDIDDKQINHLLNNAPPKSILLIEDIDAAFK------SHRDNVDSNNN 298
Query: 327 AAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLR 386
+ LT SGLLN +DG+ S G RI+ TTN E LD AL+R
Sbjct: 299 NSNNNN--------------SLTYSGLLNALDGVASQEG--RILFMTTNKIELLDSALIR 342
Query: 387 PGRMDMHIHMS 397
GR+D+ I +S
Sbjct: 343 EGRIDLKIKVS 353
>sp|Q5UR45|YL572_MIMIV Putative AAA family ATPase L572 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_L572 PE=3 SV=1
Length = 196
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 85/158 (53%), Gaps = 7/158 (4%)
Query: 260 LVAAMANYLKFDVFDLQLGNVTRDSDLRTLLLSTGNR-SILVIEDIDCSVDLPDRRNGNE 318
++ A++ + K + L L N+ D++L LL + + +ILV+EDIDC+ + R E
Sbjct: 1 MIKAISTHTKRHIHYLILNNIQDDNELINLLNAVNCKETILVLEDIDCASEAVKSR-AKE 59
Query: 319 NNADAQSKAAGAAVRKNKT---DFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTN 375
+ + +NK + LTLSG+LN +DG+++S G RI++ TTN
Sbjct: 60 EETVVEKVTDDKSTLENKILADQLKKVEKVSKLTLSGILNSLDGIFNSEG--RIVIMTTN 117
Query: 376 HKERLDPALLRPGRMDMHIHMSYCGPYGFRLLAANYLG 413
H E LDPAL+R GR+DM I S C Y + N+ G
Sbjct: 118 HSEVLDPALIRRGRIDMQIEFSNCDRYQIAKMYENFYG 155
>sp|P73437|FTSH4_SYNY3 ATP-dependent zinc metalloprotease FtsH 4 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=ftsH4 PE=2 SV=1
Length = 628
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 96/204 (47%), Gaps = 31/204 (15%)
Query: 196 IRWDSVKLEHPATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGT 255
+ DS K+ TFD +A + K + E +D F++ + Y +G +G LL GPPGT
Sbjct: 164 VEGDSTKV----TFDDVAGVEEAKTELSEVVD-FLKFPQRYTALGAKIPKGVLLVGPPGT 218
Query: 256 GKSSLVAAMANYLKFDVFDLQLGNVTRDSDLRTLLLSTGNRSILVI-----EDIDCSVDL 310
GK+ L A A F + S+ L + G + + + C V +
Sbjct: 219 GKTLLAKAAAGEAGVPFF------IISGSEFVELFVGAGAARVRDLFEQAKKQAPCIVFI 272
Query: 311 PDRRNGNENNADAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERII 370
+E +A +S+A+GA F GG + TL+ LL +DG +S+ G I+
Sbjct: 273 ------DELDAIGKSRASGA--------FMGGNDEREQTLNQLLTEMDG-FSAAGATVIV 317
Query: 371 VFTTNHKERLDPALLRPGRMDMHI 394
+ TN E LDPALLRPGR D +
Sbjct: 318 LAATNRPETLDPALLRPGRFDRQV 341
>sp|Q7URM7|FTSH2_RHOBA ATP-dependent zinc metalloprotease FtsH 2 OS=Rhodopirellula baltica
(strain SH1) GN=ftsH2 PE=3 SV=1
Length = 728
Score = 76.3 bits (186), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 90/197 (45%), Gaps = 35/197 (17%)
Query: 206 PATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMA 265
P TF+ +A + + E +D F++ E Y+ +G +G LL GPPGTGK+ L A+A
Sbjct: 247 PTTFEDVAGIEEAVDEVREVVD-FLKNSEKYQSLGGRIPKGVLLVGPPGTGKTLLAKAIA 305
Query: 266 NYLKFDVFDLQLGNVTR------DSDLRTLLLSTGNRS--ILVIEDIDCSVDLPDRRNGN 317
F L + + +R + NR+ I+ I+++D L R+G+
Sbjct: 306 GEAGVPFFSLSGSDFVEMFVGVGAARVRDMFTQAVNRAPCIIFIDELDA---LGKSRSGS 362
Query: 318 ENNADAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHK 377
GG + TL+ LL +DG S+ G I+V TN
Sbjct: 363 ---------------------VVGGHDEREQTLNALLVEMDGFDSNSG--VIVVAATNRP 399
Query: 378 ERLDPALLRPGRMDMHI 394
E LDPALLRPGR D H+
Sbjct: 400 ETLDPALLRPGRFDRHV 416
>sp|D2QZ34|FTSH_PIRSD ATP-dependent zinc metalloprotease FtsH OS=Pirellula staleyi
(strain ATCC 27377 / DSM 6068 / ICPB 4128) GN=ftsH PE=3
SV=1
Length = 700
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 78/171 (45%), Gaps = 28/171 (16%)
Query: 229 FVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLGNVTRDSDLRT 288
F+R E Y+++G +G LL GPPGTGK+ L A+A F L SD
Sbjct: 240 FLRSPEKYQKLGGRIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSLS------GSDFVE 293
Query: 289 LLLSTGNRSILVI-----EDIDCSVDLPDRRNGNENNADAQSKAAGAAVRKNKTDFAGGK 343
+ + G + + C + + + DA K+ GA + GG
Sbjct: 294 MFVGVGAARVRDMFQQAEAKAPCIIFI--------DELDALGKSRGAGI-------MGGH 338
Query: 344 GQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
+ TL+ LL +DG S+ G I++ TN E LDPALLRPGR D H+
Sbjct: 339 DEREQTLNALLVEMDGFGSNSG--VIVMAATNRPETLDPALLRPGRFDRHV 387
>sp|Q67JH0|FTSH3_SYMTH ATP-dependent zinc metalloprotease FtsH 3 OS=Symbiobacterium
thermophilum (strain T / IAM 14863) GN=ftsH3 PE=3 SV=1
Length = 626
Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 90/192 (46%), Gaps = 29/192 (15%)
Query: 208 TFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANY 267
TFD +A ++K + E +D F++ + Y +G +G LLYGPPGTGK+ L A+A
Sbjct: 155 TFDDVAGIDEVKEELAEIVD-FLKHPKRYLELGARIPKGVLLYGPPGTGKTLLAKAVAGE 213
Query: 268 LKFDVFDLQLGNVTRDSDLRTLLLSTGNRSILVI-----EDIDCSVDLPDRRNGNENNAD 322
F + SD + + G + + ++ C V + +E +A
Sbjct: 214 AGVPFFSIS------GSDFVEMFVGVGASRVRDLFEQAKKNSPCIVFI------DEIDAV 261
Query: 323 AQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDP 382
+ + AG + GG + TL+ LL +DG S + II+ TN + LDP
Sbjct: 262 GRQRGAG---------YGGGHDEREQTLNQLLVEMDGF--SANEGIIIIAATNRPDVLDP 310
Query: 383 ALLRPGRMDMHI 394
ALLRPGR D I
Sbjct: 311 ALLRPGRFDRQI 322
>sp|Q3B6R3|FTSH_PELLD ATP-dependent zinc metalloprotease FtsH OS=Pelodictyon luteolum
(strain DSM 273) GN=ftsH PE=3 SV=1
Length = 706
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 90/192 (46%), Gaps = 28/192 (14%)
Query: 208 TFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANY 267
TF +A + KA +ME +D F++ + Y R+G +G LL GPPGTGK+ L A+A
Sbjct: 197 TFKDVAGLDEAKAEVMEVVD-FLKDPKKYTRLGGKLPKGVLLVGPPGTGKTLLAKAVAGE 255
Query: 268 LKFDVFDLQLGNVTRDSDLRTLLLSTGNRSILVI-----EDIDCSVDLPDRRNGNENNAD 322
F + SD + + G + + E C + + +E +A
Sbjct: 256 ADVPFFSIS------GSDFVEMFVGVGAARVRDLFRQAKEKAPCIIFI------DEIDAV 303
Query: 323 AQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDP 382
+S+ GA + GG + TL+ LL +DG + G I++ TN + LDP
Sbjct: 304 GRSRGKGAMM--------GGNDERENTLNQLLVEMDGFATDKG--VILMAATNRPDVLDP 353
Query: 383 ALLRPGRMDMHI 394
ALLRPGR D I
Sbjct: 354 ALLRPGRFDRQI 365
>sp|Q2SF13|FTSH_HAHCH ATP-dependent zinc metalloprotease FtsH OS=Hahella chejuensis
(strain KCTC 2396) GN=ftsH PE=3 SV=1
Length = 619
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 90/195 (46%), Gaps = 35/195 (17%)
Query: 208 TFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANY 267
TFD +A + + K + E L ++R + + RVG RG LL GPPGTGK+ L A+A
Sbjct: 174 TFDEVAGQTNAKREVQE-LVEYLRDPDRFHRVGALAPRGVLLMGPPGTGKTLLARALAGE 232
Query: 268 LKFDVFDLQLGNVTR------DSDLRTL--LLSTGNRSILVIEDIDCSVDLPDRRNGNEN 319
+ + + S +R L + + SI+ I+++D
Sbjct: 233 AGVNFYPMSASEFIEVFVGVGASRVRQLFKIAKENSPSIIFIDELDSV------------ 280
Query: 320 NADAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKER 379
+++ AG + GG + TL+ +L +DG + D I++ TN +
Sbjct: 281 ---GRTRGAG---------YGGGHDEREQTLNQILAEMDGF--AGHDAVIVLAATNRPDV 326
Query: 380 LDPALLRPGRMDMHI 394
LDPAL+RPGR D H+
Sbjct: 327 LDPALMRPGRFDRHV 341
>sp|Q7UUZ7|FTSH1_RHOBA ATP-dependent zinc metalloprotease FtsH 1 OS=Rhodopirellula baltica
(strain SH1) GN=ftsH1 PE=3 SV=1
Length = 672
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 89/195 (45%), Gaps = 35/195 (17%)
Query: 208 TFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANY 267
TF+ +A +KA + E +D F++ E ++++G +G LL GPPGTGK+ L A+A
Sbjct: 195 TFNDVAGLEGVKADLQEIVD-FLKTPEKFQKLGGQVPKGVLLNGPPGTGKTLLARAVAGE 253
Query: 268 LKFDVFD------LQLGNVTRDSDLRTLLLSTGNRS--ILVIEDIDCSVDLPDRRNGNEN 319
F +Q+ S +R L + +S I+ I++ID
Sbjct: 254 ADVPFFSVNGSEFIQMFVGVGASRVRDLFKTAKEQSPSIIFIDEID-------------- 299
Query: 320 NADAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKER 379
A R+ GG + TL+ +L +DG + I++ TN +
Sbjct: 300 ----------AVGRQRGAGLGGGHDEREQTLNQILGEMDGFGGAQA--VIVIAATNRPDV 347
Query: 380 LDPALLRPGRMDMHI 394
LDPALLRPGR D H+
Sbjct: 348 LDPALLRPGRFDRHV 362
>sp|Q8TX03|PAN_METKA Proteasome-activating nucleotidase OS=Methanopyrus kandleri (strain
AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=pan PE=3
SV=1
Length = 436
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 87/190 (45%), Gaps = 34/190 (17%)
Query: 222 IMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN-----YLKFDVFDLQ 276
I E +++ ++ E +++VG +G LLYGPPGTGK+ L A+AN +++ +L
Sbjct: 191 IREVVEKPLKEPELFEKVGVEPPKGVLLYGPPGTGKTLLAKAVANHADATFIRLAAPELV 250
Query: 277 LGNVTRDSDLRTLLLSTGNR---SILVIEDIDCSVDLPDRRNGNENNADAQSKAAGAAVR 333
+ + L L SI+ I++ID A GA
Sbjct: 251 QKFIGEGARLVRELFELAREKAPSIIFIDEID---------------------AIGA--- 286
Query: 334 KNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMH 393
+ D G + TL+ LL +DG + D ++I TN K+ LDPALLRPGR D H
Sbjct: 287 RRMRDATSGDREVQRTLTQLLAEMDG-FDPLDDIKVIA-ATNRKDILDPALLRPGRFDRH 344
Query: 394 IHMSYCGPYG 403
I + G
Sbjct: 345 IKIPLPDEEG 354
>sp|Q3A579|FTSH_PELCD ATP-dependent zinc metalloprotease FtsH OS=Pelobacter carbinolicus
(strain DSM 2380 / Gra Bd 1) GN=ftsH PE=3 SV=1
Length = 646
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 86/195 (44%), Gaps = 35/195 (17%)
Query: 208 TFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANY 267
TF +A + K +ME ++ F+R + + R+G RG LL GPPGTGK+ + A+A
Sbjct: 174 TFADVAGLDEAKQELMEIIE-FLRNPKKFMRLGAKAPRGVLLVGPPGTGKTLMARAVAGE 232
Query: 268 LKFDVFDLQLGNVTR------DSDLRTLLLSTGNR--SILVIEDIDCSVDLPDRRNGNEN 319
+ F + S +R L + SI+ I+++D
Sbjct: 233 AEVPFFTISASQFIEMFVGVGASRVRDLFNNAKKNAPSIIFIDELD-------------- 278
Query: 320 NADAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKER 379
A R T GG + TL+ LL+ +DG DE I++ TN +
Sbjct: 279 ----------AVGRSRGTGLGGGNDEREQTLNQLLSEMDGF--EAHDEVIVMSATNRPDV 326
Query: 380 LDPALLRPGRMDMHI 394
LDPALLRPGR D +
Sbjct: 327 LDPALLRPGRFDRQV 341
>sp|A6TWP7|FTSH2_ALKMQ ATP-dependent zinc metalloprotease FtsH 2 OS=Alkaliphilus
metalliredigens (strain QYMF) GN=ftsH2 PE=3 SV=1
Length = 689
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 115/291 (39%), Gaps = 72/291 (24%)
Query: 208 TFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANY 267
TFD +A + KA + E +D F++ + Y +G +G L+ GPPGTGK+ L A+A
Sbjct: 163 TFDDVAGLDEEKAEVEELVD-FLKNPKKYIELGARIPKGILMIGPPGTGKTYLTKAVAGE 221
Query: 268 LKFDVFDLQLGNVTRDSDLRTLLLSTGNR--------------SILVIEDIDCSVDLPDR 313
F + SD + + G I+ I++ID
Sbjct: 222 AGVPFFSIS------GSDFVEMFVGVGASRVRDLFEQAKKSAPCIIFIDEID-------- 267
Query: 314 RNGNENNADAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFT 373
A RK GG + TL+ LL +DG + G IIV
Sbjct: 268 ----------------AVGRKRGAGLGGGHDEREQTLNQLLVEMDGFGINEG--IIIVAA 309
Query: 374 TNHKERLDPALLRPGRMDMHIHMSYCGPYG-------------------FRLLAANYLGI 414
TN + LDPALLRPGR D + + G ++LA G
Sbjct: 310 TNRPDILDPALLRPGRFDRQVMVGAPDIKGREQILQVHAKGKPLDEDVNLKVLARRTPGF 369
Query: 415 TDCEHKLVAEIETLLKTINITPAQVAEQFMKSEDADVALAALIKLLKEKER 465
T A+IE L+ + A+ E+ +K E + A+ +I L++K R
Sbjct: 370 TP------ADIENLMNEAALLTARKNEKKIKMETVEEAITKVIAGLEKKSR 414
>sp|A1AT11|FTSH_PELPD ATP-dependent zinc metalloprotease FtsH OS=Pelobacter propionicus
(strain DSM 2379) GN=ftsH PE=3 SV=1
Length = 623
Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 89/195 (45%), Gaps = 35/195 (17%)
Query: 208 TFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANY 267
+F +A D K + E +D ++R + + R+G +G LL GPPGTGK+ L A+A
Sbjct: 172 SFKDVAGMEDSKQELKEVVD-YLRNPKQFARIGGKVPKGVLLVGPPGTGKTLLARAVAGE 230
Query: 268 LKFDVFDLQLGNVTR------DSDLRTLLLST--GNRSILVIEDIDCSVDLPDRRNGNEN 319
F + S +R L + SI+ I+++D
Sbjct: 231 AGVAFFSISASQFIEMFVGVGASRVRDLFTNAKKAAPSIVFIDELD-------------- 276
Query: 320 NADAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKER 379
A +S+ AG F GG + TL+ LL+ +DG +E I++ TN +
Sbjct: 277 -AVGRSRGAG---------FGGGHDEREQTLNQLLSEMDGF--DQHEEVIVLAATNRPDV 324
Query: 380 LDPALLRPGRMDMHI 394
LDPALLRPGR D H+
Sbjct: 325 LDPALLRPGRFDRHV 339
>sp|P71408|FTSH_HELPY ATP-dependent zinc metalloprotease FtsH OS=Helicobacter pylori
(strain ATCC 700392 / 26695) GN=ftsH PE=1 SV=2
Length = 632
Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 88/194 (45%), Gaps = 33/194 (17%)
Query: 209 FDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYL 268
F+ +A + K ++E +D F++ E Y +G +G LL GPPGTGK+ L A+A
Sbjct: 169 FNDMAGNEEAKEEVVEIVD-FLKYPERYANLGAKIPKGVLLVGPPGTGKTLLAKAVAGEA 227
Query: 269 KFDVFDLQLGNVTR------DSDLRTLLLSTGNR--SILVIEDIDCSVDLPDRRNGNENN 320
F + + S +R L + + SI+ I++ID
Sbjct: 228 HVPFFSMGGSSFIEMFVGLGASRVRDLFETAKKQAPSIIFIDEID--------------- 272
Query: 321 ADAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERL 380
A +S+AAG V G + TL+ LL +DG S I++ TN E L
Sbjct: 273 AIGKSRAAGGVVS--------GNDEREQTLNQLLAEMDGFGSENAP-VIVLAATNRPEIL 323
Query: 381 DPALLRPGRMDMHI 394
DPAL+RPGR D +
Sbjct: 324 DPALMRPGRFDRQV 337
>sp|O32617|FTSH_HELFC ATP-dependent zinc metalloprotease FtsH OS=Helicobacter felis
(strain ATCC 49179 / NCTC 12436 / CS1) GN=ftsH PE=3 SV=1
Length = 638
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 89/195 (45%), Gaps = 18/195 (9%)
Query: 201 VKLEHPAT-FDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSS 259
+ E P F+ +A + K ++E +D F++ + Y +G +G LL GPPGTGK+
Sbjct: 166 INAEKPKVRFNDMAGNEEAKEEVVEIVD-FLKYPDRYASLGAKIPKGVLLVGPPGTGKTL 224
Query: 260 LVAAMANYLKFDVFDLQLGNVTRDSDLRTLLLSTGNRSILVIEDIDCSVDLPDRRNGNEN 319
L A+A F + S + + G + + DI + P +E
Sbjct: 225 LAKAVAGEASVPFFSMG------GSSFIEMFVGLGASRVRDLFDI-AKKEAPSIIFIDEI 277
Query: 320 NADAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKER 379
+A +S+AAG + G + TL+ LL +DG S I++ TN E
Sbjct: 278 DAIGKSRAAGGMI--------SGNDEREQTLNQLLAEMDGFGSENAP-VIVLAATNRPEI 328
Query: 380 LDPALLRPGRMDMHI 394
LDPALLRPGR D +
Sbjct: 329 LDPALLRPGRFDRQV 343
>sp|B8J992|FTSH_ANAD2 ATP-dependent zinc metalloprotease FtsH OS=Anaeromyxobacter
dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=ftsH PE=3
SV=1
Length = 706
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 85/198 (42%), Gaps = 40/198 (20%)
Query: 214 MEPDLKATI------------MEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLV 261
MEPD T ++++ F++ E Y+R+G +G LL GPPGTGK+ L
Sbjct: 197 MEPDTGVTFQDAAGIDEAVEELQEIVEFLKTPEKYRRLGGRIPKGVLLVGPPGTGKTLLA 256
Query: 262 AAMANYLKFDVFDLQLGNVTRDSDLRTLLLSTGNRSI-----LVIEDIDCSVDLPDRRNG 316
A A F L S+ + + G + + C V +
Sbjct: 257 RATAGEAGVPFFSLS------GSEFVEMFVGVGAARVRDLFAQATQKAPCIVFI------ 304
Query: 317 NENNADAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNH 376
+E +A +S+ AG GG + TL+ LL +DG + G II+ TN
Sbjct: 305 DELDALGKSRNAG---------IMGGHDEREQTLNQLLAEMDGFDARAG--LIIMGATNR 353
Query: 377 KERLDPALLRPGRMDMHI 394
E LDPALLRPGR D +
Sbjct: 354 PEILDPALLRPGRFDRQV 371
>sp|Q9ZM66|FTSH_HELPJ ATP-dependent zinc metalloprotease FtsH OS=Helicobacter pylori
(strain J99) GN=ftsH PE=3 SV=1
Length = 632
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 88/194 (45%), Gaps = 33/194 (17%)
Query: 209 FDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYL 268
F+ +A + K ++E +D F++ E Y +G +G LL GPPGTGK+ L A+A
Sbjct: 169 FNDMAGNEEAKEEVVEIVD-FLKYPERYANLGAKIPKGVLLVGPPGTGKTLLAKAVAGEA 227
Query: 269 KFDVFDLQLGNVTR------DSDLRTLLLSTGNR--SILVIEDIDCSVDLPDRRNGNENN 320
F + + S +R L + + SI+ I++ID
Sbjct: 228 HVPFFSMGGSSFIEMFVGLGASRVRDLFETAKKQAPSIIFIDEID--------------- 272
Query: 321 ADAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERL 380
A +S+AAG + G + TL+ LL +DG S I++ TN E L
Sbjct: 273 AIGKSRAAGGMIS--------GNDEREQTLNQLLAEMDGFGSENAP-VIVLAATNRPEIL 323
Query: 381 DPALLRPGRMDMHI 394
DPAL+RPGR D +
Sbjct: 324 DPALMRPGRFDRQV 337
>sp|O80860|FTSH2_ARATH ATP-dependent zinc metalloprotease FTSH 2, chloroplastic
OS=Arabidopsis thaliana GN=FTSH2 PE=1 SV=1
Length = 695
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 85/194 (43%), Gaps = 29/194 (14%)
Query: 208 TFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANY 267
TFD +A + K ME ++ F+++ E + VG +G LL GPPGTGK+ L A+A
Sbjct: 225 TFDDVAGVDEAKQDFMEVVE-FLKKPERFTAVGAKIPKGVLLIGPPGTGKTLLAKAIAGE 283
Query: 268 LKFDVFDLQLGNVTRDSDLRTLLLSTGNRSILVI-----EDIDCSVDLPDRRNGNENNAD 322
F + S+ + + G + + E+ C V + +
Sbjct: 284 AGVPFFSIS------GSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDE---------- 327
Query: 323 AQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDP 382
A R+ T GG + TL+ LL +DG + G I+V TN + LD
Sbjct: 328 -----IDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTG--VIVVAATNRADILDS 380
Query: 383 ALLRPGRMDMHIHM 396
ALLRPGR D + +
Sbjct: 381 ALLRPGRFDRQVSV 394
>sp|Q8W585|FTSH8_ARATH ATP-dependent zinc metalloprotease FTSH 8, chloroplastic
OS=Arabidopsis thaliana GN=FTSH8 PE=1 SV=1
Length = 685
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 85/194 (43%), Gaps = 29/194 (14%)
Query: 208 TFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANY 267
TFD +A + K ME ++ F+++ E + VG +G LL GPPGTGK+ L A+A
Sbjct: 218 TFDDVAGVDEAKQDFMEVVE-FLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 276
Query: 268 LKFDVFDLQLGNVTRDSDLRTLLLSTGNRSILVI-----EDIDCSVDLPDRRNGNENNAD 322
F + S+ + + G + + E+ C V + +
Sbjct: 277 AGVPFFSIS------GSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDE---------- 320
Query: 323 AQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDP 382
A R+ T GG + TL+ LL +DG + G I+V TN + LD
Sbjct: 321 -----IDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTG--VIVVAATNRADILDS 373
Query: 383 ALLRPGRMDMHIHM 396
ALLRPGR D + +
Sbjct: 374 ALLRPGRFDRQVSV 387
>sp|Q5UPR4|YR776_MIMIV Uncharacterized protein R776 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_R776 PE=4 SV=1
Length = 314
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 71/123 (57%), Gaps = 3/123 (2%)
Query: 198 WDSVKLEHPATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGK 257
W + P F + ++++ +++D+D F+R ++ Y+ +G ++RG LLYG G GK
Sbjct: 156 WSYPIIRRPCKFLDSNLTTEMRS-VLKDVDVFMRNEDTYRELGANYRRGMLLYGESGCGK 214
Query: 258 SSLVAAMANYLKFDVFDLQLGNV-TRDSDLRTLLLSTGNRSILVIEDIDCSVDLPDRRNG 316
+ L++ ++N D + L L + DS L +L + RSILVIE+ID ++ + NG
Sbjct: 215 TGLISIISNKYGMDSYILNLNSKDMSDSVLISLASNVKARSILVIEEIDKQIETLN-ANG 273
Query: 317 NEN 319
N+N
Sbjct: 274 NKN 276
>sp|B3DY14|FTSH2_METI4 ATP-dependent zinc metalloprotease FtsH 2 OS=Methylacidiphilum
infernorum (isolate V4) GN=ftsH2 PE=3 SV=1
Length = 641
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 88/195 (45%), Gaps = 29/195 (14%)
Query: 208 TFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANY 267
TF +A + K + E L F++ + ++++G +G L+ GPPGTGK+ L A+A
Sbjct: 151 TFKDVAGVEEAKEEVQE-LVEFLKDPKKFQKLGGRIPKGVLMVGPPGTGKTLLAKAIAGE 209
Query: 268 LKFDVFDLQLGNVTRDSDLRTLLLSTGNRSILVI-----EDIDCSVDLPDRRNGNENNAD 322
F + SD + + G + + C V + + D
Sbjct: 210 ADVPFFSIS------GSDFVEMFVGVGASRVRDMFEQARRHAPCIVFI--------DEID 255
Query: 323 AQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDP 382
A +A G T GG + TL+ LL +DG+ S G I++ TN K+ LDP
Sbjct: 256 AVGRARG-------TGLGGGHDEREQTLNALLVEMDGIESQEG--VIVIAATNRKDVLDP 306
Query: 383 ALLRPGRMDMHIHMS 397
ALLRPGR D + ++
Sbjct: 307 ALLRPGRFDREVRVN 321
>sp|Q0TTK8|FTSH_CLOP1 ATP-dependent zinc metalloprotease FtsH OS=Clostridium perfringens
(strain ATCC 13124 / NCTC 8237 / Type A) GN=ftsH PE=3
SV=1
Length = 717
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 87/196 (44%), Gaps = 30/196 (15%)
Query: 204 EHPATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAA 263
E TF +A + + K +++E +D F+ Y +G +G LL GPPGTGK+ L A
Sbjct: 160 ETGITFKDVAGQDEAKESLVEIVD-FLHDTRKYVEIGAKLPKGALLVGPPGTGKTLLAKA 218
Query: 264 MANYLKFDVFDLQLGNVTRDSDLRTLLLSTGNRSILVI-----EDIDCSVDLPDRRNGNE 318
+A K F + SD + + G + + E C V +
Sbjct: 219 VAGEAKVPFFSMS------GSDFVEMFVGMGAARVRDLFKQAEEKAPCIVFI-------- 264
Query: 319 NNADAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKE 378
+ DA K+ A++ G + TL+ LL +DG SS G +I+ TN E
Sbjct: 265 DEIDAIGKSRDGAIQ--------GNDEREQTLNQLLTEMDGFDSSKG--VVILAATNRPE 314
Query: 379 RLDPALLRPGRMDMHI 394
LD ALLRPGR D I
Sbjct: 315 VLDKALLRPGRFDRRI 330
>sp|Q655S1|FTSH2_ORYSJ ATP-dependent zinc metalloprotease FTSH 2, chloroplastic OS=Oryza
sativa subsp. japonica GN=FTSH2 PE=3 SV=1
Length = 676
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 86/194 (44%), Gaps = 29/194 (14%)
Query: 208 TFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANY 267
TFD +A + K ME ++ F+++ E + VG +G LL GPPGTGK+ L A+A
Sbjct: 212 TFDDVAGVDEAKQDFMEVVE-FLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 270
Query: 268 LKFDVFDLQLGNVTRDSDLRTLLLSTGNRSILVI-----EDIDCSVDLPDRRNGNENNAD 322
F + S+ + + G + + E+ C V + + D
Sbjct: 271 AGVPFFSIS------GSEFVEMFVGVGASRVRDLFKKAKENAPCIVFV--------DEID 316
Query: 323 AQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDP 382
A R+ T GG + TL+ LL +DG + G I++ TN + LD
Sbjct: 317 AVG-------RQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTG--IIVIAATNRADILDS 367
Query: 383 ALLRPGRMDMHIHM 396
ALLRPGR D + +
Sbjct: 368 ALLRPGRFDRQVSV 381
>sp|Q67T82|FTSH2_SYMTH ATP-dependent zinc metalloprotease FtsH 2 OS=Symbiobacterium
thermophilum (strain T / IAM 14863) GN=ftsH2 PE=3 SV=1
Length = 587
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 91/199 (45%), Gaps = 28/199 (14%)
Query: 204 EHPATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAA 263
E P TF +A ++K + E +D +++ + Y+ +G +G LLYGPPGTGK+ L A
Sbjct: 146 ESPVTFADVAGMDEVKGELEEIVD-YLKNPDKYRAIGARIPKGVLLYGPPGTGKTLLARA 204
Query: 264 MANYLKFDVFDLQLGNVTRDSDLRTLLLSTGNRSILVI-----EDIDCSVDLPDRRNGNE 318
+A F L S L + G + + ++ C V + +E
Sbjct: 205 VAGEAGVPFFALS------GSSFVELFVGMGASRVRELFAQARKNAPCIVFI------DE 252
Query: 319 NNADAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKE 378
+A + + + A V GG + TL+ LL +DG + G I++ TN +
Sbjct: 253 IDAVGRQRGSAAVV--------GGHDEREQTLNQLLTEMDGFGAYEG--VIVMAATNRPD 302
Query: 379 RLDPALLRPGRMDMHIHMS 397
LD ALLRPGR D I +
Sbjct: 303 VLDKALLRPGRFDRQIPVG 321
>sp|P32794|AFG2_YEAST ATPase family gene 2 protein OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=AFG2 PE=1 SV=1
Length = 780
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 95/210 (45%), Gaps = 45/210 (21%)
Query: 203 LEHPATF-DTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLV 261
LE P + + + +LK + E + + E + R+G + +G LLYGPPG K+
Sbjct: 508 LEMPKVYWSDIGGQEELKTKMKEMIQLPLEASETFARLGISAPKGVLLYGPPGCSKTLTA 567
Query: 262 AAMA-----NYLKF---DVFDLQLGNVTRDSDLRTLL--LSTGNRSILVIEDIDCSVDLP 311
A+A N+L ++F+ +G R +R + + SI+ ++ID P
Sbjct: 568 KALATESGINFLAVKGPEIFNKYVGESERA--IREIFRKARSAAPSIIFFDEIDALS--P 623
Query: 312 DRRNGNENNADAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIV 371
DR D S +A H+LT LLN IDG+ G +IV
Sbjct: 624 DR--------DGSSTSAA---------------NHVLT--SLLNEIDGVEELKG--VVIV 656
Query: 372 FTTNHKERLDPALLRPGRMDMHIHMSYCGP 401
TN + +D ALLRPGR+D HI Y GP
Sbjct: 657 AATNRPDEIDAALLRPGRLDRHI---YVGP 683
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 79/175 (45%), Gaps = 36/175 (20%)
Query: 230 VRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLGNVTR------D 283
+ + + G + RG LL+GPPGTGK+ L+ +AN V + ++ +
Sbjct: 265 LHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLRVVANTSNAHVLTINGPSIVSKYLGETE 324
Query: 284 SDLRTLLLSTG--NRSILVIEDIDCSVDLPDRRNGNENNADAQSKAAGAAVRKNKTDFAG 341
+ LR + SI+ I++ID P+R N+++ + +S+
Sbjct: 325 AALRDIFNEARKYQPSIIFIDEIDSIA--PNR--ANDDSGEVESR--------------- 365
Query: 342 GKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHM 396
++ LL +DG+ ++ + +++ TN +DPAL RPGR D + +
Sbjct: 366 -------VVATLLTLMDGMGAA--GKVVVIAATNRPNSVDPALRRPGRFDQEVEI 411
>sp|P73179|FTSH1_SYNY3 ATP-dependent zinc metalloprotease FtsH 1 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=ftsH1 PE=2 SV=1
Length = 665
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 28/192 (14%)
Query: 223 MEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLGNVTR 282
++++ F+++ E + +G RG LL GPPGTGK+ L A+A F +
Sbjct: 223 LQEVVTFLKQPEKFTAIGAKIPRGVLLIGPPGTGKTLLAKAIAGEAGVPFFSIS------ 276
Query: 283 DSDLRTLLLSTGNRSILVI-----EDIDCSVDLPDRRNGNENNADAQSKAAGAAVRKNKT 337
S+ + + G + + E+ C V + +E +A + + G
Sbjct: 277 GSEFVEMFVGVGASRVRDLFKKAKENAPCLVFI------DEIDAVGRQRGVG-------- 322
Query: 338 DFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMS 397
+ GG + TL+ LL +DG + G I++ TN + LD ALLRPGR D + +
Sbjct: 323 -YGGGNDEREQTLNQLLTEMDGFEGNSG--IIVIAATNRPDVLDLALLRPGRFDRQVTVD 379
Query: 398 YCGPYGFRLLAA 409
Y G L+ A
Sbjct: 380 YPDVQGRELILA 391
>sp|D1CDT8|FTSH_THET1 ATP-dependent zinc metalloprotease FtsH OS=Thermobaculum terrenum
(strain ATCC BAA-798 / YNP1) GN=ftsH PE=3 SV=1
Length = 646
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 90/192 (46%), Gaps = 28/192 (14%)
Query: 208 TFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANY 267
TFD +A + K + E +D F++ + Y+R+G +G LL GPPGTGK+ L A+A
Sbjct: 195 TFDDVAGIEEAKQELAEIVD-FLKNPQKYQRLGGTIPKGVLLIGPPGTGKTLLARAVAGE 253
Query: 268 LKFDVFDLQLGNVTRDSDLRTLLLSTGNRSILVI-----EDIDCSVDLPDRRNGNENNAD 322
F + S+ +++ G + + ++ C + + + D
Sbjct: 254 AGVPFFSMS------GSEFVEMIVGVGAARVRELFQQAKKEAPCIIFV--------DELD 299
Query: 323 AQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDP 382
A + G+++ GG + TL+ LL +DG S G I++ TN + LDP
Sbjct: 300 AIGRRRGSSIN------VGGHDEREQTLNQLLVEMDGFDSRQG--VIVLAATNRPDVLDP 351
Query: 383 ALLRPGRMDMHI 394
ALLRPGR D +
Sbjct: 352 ALLRPGRFDRRV 363
>sp|A0L4S0|FTSH_MAGSM ATP-dependent zinc metalloprotease FtsH OS=Magnetococcus sp.
(strain MC-1) GN=ftsH PE=3 SV=1
Length = 673
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 84/177 (47%), Gaps = 28/177 (15%)
Query: 223 MEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLGNVTR 282
++++ +F++ ++R+G +G LL GPPGTGK+ L A+A F+L
Sbjct: 166 LQEVVQFLKDPHKFQRLGGKIPKGVLLVGPPGTGKTLLARAIAGEANVPFFNLS------ 219
Query: 283 DSDLRTLLLSTGNRSILVI-----EDIDCSVDLPDRRNGNENNADAQSKAAGAAVRKNKT 337
SD + + G + + ++ C + + +E +A + + AG
Sbjct: 220 GSDFVEMFVGVGAARVRDMFEQGKKNAPCIIFI------DEIDAVGRHRGAG-------- 265
Query: 338 DFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHI 394
GG + TL+ LL +DG S+ G I+V TN + LDPALLRPGR D +
Sbjct: 266 -LGGGHDEREQTLNQLLVEMDGFESTEG--VIMVAATNRPDVLDPALLRPGRFDRQV 319
>sp|A8ZNZ4|FTSH_ACAM1 ATP-dependent zinc metalloprotease FtsH OS=Acaryochloris marina
(strain MBIC 11017) GN=ftsH PE=3 SV=1
Length = 655
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 88/192 (45%), Gaps = 27/192 (14%)
Query: 208 TFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANY 267
TFD +A + K ++E +D F+ + Y R+G +G LL GPPGTGK+ L A+A
Sbjct: 174 TFDDVAGVEEAKTELLEIVD-FLAHADKYTRLGAKIPKGVLLVGPPGTGKTLLAKAIAGE 232
Query: 268 LKFDVFDLQLGNVTRDSDLRTLLLSTGNRSILVI-----EDIDCSVDLPDRRNGNENNAD 322
K F + S+ L + G + + + C V + + D
Sbjct: 233 AKVPFFSIS------GSEFIELFVGIGAARVRDLFEQAKQQAPCIVFI--------DELD 278
Query: 323 AQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDP 382
A KA R F GG + TL+ LL+ +DG + G I++ TN E LDP
Sbjct: 279 ALGKA-----RGGPGGFTGGNDEREQTLNQLLSEMDGFDPNVG--VILLAATNRPEVLDP 331
Query: 383 ALLRPGRMDMHI 394
ALLRPGR D I
Sbjct: 332 ALLRPGRFDRQI 343
>sp|B3R057|FTSH1_PHYMT ATP-dependent zinc metalloprotease FtsH 1 OS=Phytoplasma mali
(strain AT) GN=ftsH1 PE=3 SV=1
Length = 600
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 90/203 (44%), Gaps = 35/203 (17%)
Query: 200 SVKLEHPATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSS 259
S K + TF +A + K + E +D F+++ + Y+ +G A +G LL GPPGTGK+
Sbjct: 165 SAKQKSLFTFKDVAGNTEEKEEMTELID-FLKQPQKYETIGAAIPKGVLLEGPPGTGKTL 223
Query: 260 LVAAMANYLKFDVFDLQLGNVTR------DSDLRTLLLSTGNRS--ILVIEDIDCSVDLP 311
L A+A + + S +RTL + +L I++ID L
Sbjct: 224 LAKALAGEASVPFYAVSGSEFVEMYVGVGASRVRTLFKEAKLNAPCVLFIDEIDV---LG 280
Query: 312 DRRNGNENNADAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIV 371
+R GN +GG + TL+ LL +DG + G I++
Sbjct: 281 GKRGGNS---------------------SGGNQEKDQTLNQLLTEMDGFTQAKG--IIVI 317
Query: 372 FTTNHKERLDPALLRPGRMDMHI 394
TN + LD ALLRPGR D I
Sbjct: 318 GATNRADMLDAALLRPGRFDRKI 340
>sp|D1C8C0|FTSH4_SPHTD ATP-dependent zinc metalloprotease FtsH 4 OS=Sphaerobacter
thermophilus (strain DSM 20745 / S 6022) GN=ftsh4 PE=3
SV=1
Length = 658
Score = 66.2 bits (160), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 85/188 (45%), Gaps = 21/188 (11%)
Query: 208 TFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANY 267
TF +A E + KA + E +D F+R Y +G RG LL GPPGTGK+ L A+A
Sbjct: 201 TFADVAGEEEAKAELSEVVD-FLRNPMKYHAIGARLPRGILLVGPPGTGKTLLARAVAGE 259
Query: 268 LKFDVFDLQLGNVTRDSDLRTLLLSTG-NRSILVIEDIDCSVDLPDRRNGNENNADAQSK 326
F + S+ + + G +R + E S P +E +A + +
Sbjct: 260 AGVPFFSVSA------SEFVEMFVGVGASRVRDLFERAKASA--PSIMFVDELDAVGRQR 311
Query: 327 AAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLR 386
AG GG + TL+ LL +DG + I++ TN + LDPALLR
Sbjct: 312 FAG---------LGGGNDEREQTLNQLLVEMDGF--EPHQDVIVIAATNRPDVLDPALLR 360
Query: 387 PGRMDMHI 394
PGR D +
Sbjct: 361 PGRFDRQV 368
>sp|A6LD25|FTSH_PARD8 ATP-dependent zinc metalloprotease FtsH OS=Parabacteroides
distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152)
GN=ftsH PE=3 SV=1
Length = 684
Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 89/197 (45%), Gaps = 34/197 (17%)
Query: 208 TFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANY 267
TF +A + K + E++ F++ E Y +G +G LL GPPGTGK+ L A+A
Sbjct: 194 TFKDVAGLAEAKQEV-EEIVSFLKNPEKYTELGGKIPKGALLVGPPGTGKTLLAKAVAGE 252
Query: 268 LKFDVFDLQLGNVTR------DSDLRTLLLSTGNRS--ILVIEDIDCSVDLPDRRNGNEN 319
F L + S +R L +S I+ I++ID +V +N N N
Sbjct: 253 ANVPFFSLSGSDFVEMFVGVGASRVRDLFRQAKEKSPCIVFIDEID-AVGRARGKNANMN 311
Query: 320 NADAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKER 379
+ D R+N TL+ LL +DG S+ G II+ TN +
Sbjct: 312 SNDE---------REN-------------TLNQLLTEMDGFGSNSG--VIILAATNRADI 347
Query: 380 LDPALLRPGRMDMHIHM 396
LD ALLR GR D IH+
Sbjct: 348 LDKALLRAGRFDRQIHV 364
>sp|P0C5C0|FTSH_MYCTU ATP-dependent zinc metalloprotease FtsH OS=Mycobacterium
tuberculosis GN=ftsH PE=1 SV=1
Length = 760
Score = 65.9 bits (159), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 80/178 (44%), Gaps = 28/178 (15%)
Query: 225 DLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLGNVTRDS 284
++ F++ Y+ +G +G LLYGPPGTGK+ L A+A F + S
Sbjct: 177 EIKDFLQNPSRYQALGAKIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTIS------GS 230
Query: 285 DLRTLLLSTGNRSILVI-----EDIDCSVDLPDRRNGNENNADAQSKAAGAAVRKNKTDF 339
D + + G + + ++ C + + +E +A + + AG
Sbjct: 231 DFVEMFVGVGASRVRDLFEQAKQNSPCIIFV------DEIDAVGRQRGAG---------L 275
Query: 340 AGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMS 397
GG + TL+ LL +DG G I++ TN + LDPALLRPGR D I +S
Sbjct: 276 GGGHDEREQTLNQLLVEMDGFGDRAG--VILIAATNRPDILDPALLRPGRFDRQIPVS 331
>sp|A5U8T5|FTSH_MYCTA ATP-dependent zinc metalloprotease FtsH OS=Mycobacterium
tuberculosis (strain ATCC 25177 / H37Ra) GN=ftsH PE=3
SV=1
Length = 760
Score = 65.9 bits (159), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 80/178 (44%), Gaps = 28/178 (15%)
Query: 225 DLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLGNVTRDS 284
++ F++ Y+ +G +G LLYGPPGTGK+ L A+A F + S
Sbjct: 177 EIKDFLQNPSRYQALGAKIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTIS------GS 230
Query: 285 DLRTLLLSTGNRSILVI-----EDIDCSVDLPDRRNGNENNADAQSKAAGAAVRKNKTDF 339
D + + G + + ++ C + + +E +A + + AG
Sbjct: 231 DFVEMFVGVGASRVRDLFEQAKQNSPCIIFV------DEIDAVGRQRGAG---------L 275
Query: 340 AGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMS 397
GG + TL+ LL +DG G I++ TN + LDPALLRPGR D I +S
Sbjct: 276 GGGHDEREQTLNQLLVEMDGFGDRAG--VILIAATNRPDILDPALLRPGRFDRQIPVS 331
>sp|P0A4V9|FTSH_MYCBO ATP-dependent zinc metalloprotease FtsH OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=ftsH PE=3 SV=1
Length = 760
Score = 65.9 bits (159), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 80/178 (44%), Gaps = 28/178 (15%)
Query: 225 DLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLGNVTRDS 284
++ F++ Y+ +G +G LLYGPPGTGK+ L A+A F + S
Sbjct: 177 EIKDFLQNPSRYQALGAKIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTIS------GS 230
Query: 285 DLRTLLLSTGNRSILVI-----EDIDCSVDLPDRRNGNENNADAQSKAAGAAVRKNKTDF 339
D + + G + + ++ C + + +E +A + + AG
Sbjct: 231 DFVEMFVGVGASRVRDLFEQAKQNSPCIIFV------DEIDAVGRQRGAG---------L 275
Query: 340 AGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMS 397
GG + TL+ LL +DG G I++ TN + LDPALLRPGR D I +S
Sbjct: 276 GGGHDEREQTLNQLLVEMDGFGDRAG--VILIAATNRPDILDPALLRPGRFDRQIPVS 331
>sp|O34703|YJOB_BACSU Uncharacterized ATPase YjoB OS=Bacillus subtilis (strain 168)
GN=yjoB PE=1 SV=1
Length = 423
Score = 65.9 bits (159), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 80/184 (43%), Gaps = 44/184 (23%)
Query: 212 LAMEPDLKATIMEDLDRFVRR-KEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKF 270
+ M P LK I +D+F K FY+ +KRG LLYGPPG GK++LV ++A +
Sbjct: 187 VIMNPLLKKEIYRSIDQFFHSDKSFYQTYDIPYKRGILLYGPPGNGKTTLVKSIAGSIDA 246
Query: 271 DVFDLQLGNVTRDSDLRTLLLSTGN--RSILVIEDIDCSVDLPDRRNGNENNADAQSKAA 328
V Q+ T + + + ++LVIEDID +P+
Sbjct: 247 PVAYWQITEFTSSETIEEVFQAARRLAPAVLVIEDIDS---MPE---------------- 287
Query: 329 GAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALL-RP 387
VR S LN +DG S G ++ TTN+ E +DP L+ R
Sbjct: 288 --DVR-----------------SFFLNTLDGATSKEG--LFLIGTTNYPEEIDPGLMNRA 326
Query: 388 GRMD 391
GR D
Sbjct: 327 GRFD 330
>sp|B9L3S8|FTSH2_THERP ATP-dependent zinc metalloprotease FtsH 2 OS=Thermomicrobium roseum
(strain ATCC 27502 / DSM 5159 / P-2) GN=ftsH2 PE=3 SV=1
Length = 699
Score = 65.9 bits (159), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 88/193 (45%), Gaps = 20/193 (10%)
Query: 203 LEHP-ATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLV 261
+E P TF +A E + KA + + +D F++ Y R+G RG LL GPPGTGK+ L
Sbjct: 243 VERPQVTFADVAGEEEAKAELAQVVD-FLKNPAKYHRIGARLPRGVLLVGPPGTGKTLLA 301
Query: 262 AAMANYLKFDVFDLQLGNVTRDSDLRTLLLSTGNRSILVIEDIDCSVDLPDRRNGNENNA 321
A+A F + S+ + + G + + + P +E +A
Sbjct: 302 RAVAGEAGVPFFSVS------ASEFVEMFVGVGASRVRDLFE-RAKAQAPSIIFIDELDA 354
Query: 322 DAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLD 381
+ + AG V G + TL+ LL +DG + + +++ TN + LD
Sbjct: 355 VGRQRFAGLGV---------GNDEREQTLNQLLVEMDGFEAHT--DVVVIAATNRPDVLD 403
Query: 382 PALLRPGRMDMHI 394
PALLRPGR D +
Sbjct: 404 PALLRPGRFDRQV 416
>sp|P49825|FTSH_ODOSI ATP-dependent zinc metalloprotease FtsH OS=Odontella sinensis
GN=ftsH PE=3 SV=1
Length = 644
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 82/186 (44%), Gaps = 28/186 (15%)
Query: 217 DLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQ 276
D T E++ F++ + Y VG +G LL GPPGTGK+ L A+AN F +
Sbjct: 192 DEAKTEFEEIVSFLKEPDKYTIVGAKIPKGILLVGPPGTGKTLLAKAIANEADVPFFSVA 251
Query: 277 LGNVTRDSDLRTLLLSTGNRSILVI-----EDIDCSVDLPDRRNGNENNADAQSKAAGAA 331
S+ + + G + + E+ C V + + DA + GA
Sbjct: 252 ------GSEFVEMFIGIGAARVRDLFKKASENAPCIVFI--------DEIDAVGRERGAG 297
Query: 332 VRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMD 391
V GG + TL+ LL +DG + G I+V TN + LD ALLRPGR D
Sbjct: 298 V-------GGGNDEREQTLNQLLTEMDGFKENKG--VIVVGATNRADILDAALLRPGRFD 348
Query: 392 MHIHMS 397
+ ++
Sbjct: 349 RQVTVN 354
>sp|A1URA3|FTSH_BARBK ATP-dependent zinc metalloprotease FtsH OS=Bartonella bacilliformis
(strain ATCC 35685 / KC583) GN=ftsH PE=3 SV=1
Length = 764
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 29/192 (15%)
Query: 208 TFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANY 267
TF +A + K + E +D F+R + ++R+G RG LL GPPGTGK+ L ++A
Sbjct: 154 TFKDVAGVEEAKQDLQEIVD-FLREPQKFQRLGGRIPRGVLLVGPPGTGKTLLARSIAGE 212
Query: 268 LKFDVFDLQLGNVTRDSDLRTLLLSTGNRSI-----LVIEDIDCSVDLPDRRNGNENNAD 322
F + SD + + G + ++ C + + +E +A
Sbjct: 213 ANVPFFTIS------GSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFI------DEIDAV 260
Query: 323 AQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDP 382
+ + AG GG + TL+ LL +DG + I++ TN + LDP
Sbjct: 261 GRHRGAG---------LGGGNDEREQTLNQLLVEMDGF--EPNESIILIAATNRPDVLDP 309
Query: 383 ALLRPGRMDMHI 394
ALLRPGR D +
Sbjct: 310 ALLRPGRFDRQV 321
>sp|B0K5A3|FTSH1_THEPX ATP-dependent zinc metalloprotease FtsH 1 OS=Thermoanaerobacter sp.
(strain X514) GN=ftsH1 PE=3 SV=1
Length = 611
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 86/194 (44%), Gaps = 31/194 (15%)
Query: 207 ATFDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMAN 266
TF+ +A + K + E ++ F++ + + +G +G LL GPPGTGK+ L A+A
Sbjct: 158 VTFNDVAGADEEKEELQEIVE-FLKYPKKFLELGARIPKGVLLVGPPGTGKTLLAKAVAG 216
Query: 267 YLKFDVFDLQLGNVTRDSDLRTLLLSTGNRSILVIEDIDCSVDLPDRRNGNE------NN 320
F + SD + + G + DL D+ N +
Sbjct: 217 EAGVPFFSIS------GSDFVEMFVGVGAARVR---------DLFDQAKKNAPCIVFIDE 261
Query: 321 ADAQSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERL 380
DA + GA + GG + TL+ LL +DG S + I++ TN + L
Sbjct: 262 IDAVGRQRGAGL-------GGGHDEREQTLNQLLVEMDGF--SVNEGIIVIAATNRPDIL 312
Query: 381 DPALLRPGRMDMHI 394
DPALLRPGR D HI
Sbjct: 313 DPALLRPGRFDRHI 326
>sp|Q6M2F0|FTSH_CORGL ATP-dependent zinc metalloprotease FtsH OS=Corynebacterium
glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 /
LMG 3730 / NCIMB 10025) GN=ftsH PE=3 SV=1
Length = 853
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 28/180 (15%)
Query: 223 MEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVFDLQLGNVTR 282
+ ++ F+ Y+ +G RG LLYGPPGTGK+ L A+A + +
Sbjct: 177 LHEIKDFLEDPTRYEALGAKIPRGVLLYGPPGTGKTLLARAVAGEAGVPFYSIS------ 230
Query: 283 DSDLRTLLLSTGNRSILVI-----EDIDCSVDLPDRRNGNENNADAQSKAAGAAVRKNKT 337
SD + + G + + E+ C + + + DA +A G+ +
Sbjct: 231 GSDFVEMFVGVGASRVRDLFKQAKENSPCIIFV--------DEIDAVGRARGSGM----- 277
Query: 338 DFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMS 397
GG + TL+ LL +DG G I++ TN + LDPALLRPGR D I ++
Sbjct: 278 --GGGHDEREQTLNQLLVEMDGFGDRQG--VILMAATNRPDVLDPALLRPGRFDRQIPVT 333
>sp|Q4L3G8|FTSH_STAHJ ATP-dependent zinc metalloprotease FtsH OS=Staphylococcus
haemolyticus (strain JCSC1435) GN=ftsH PE=3 SV=1
Length = 727
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 88/194 (45%), Gaps = 29/194 (14%)
Query: 209 FDTLAMEPDLKATIMEDLDRFVRRKEFYKRVGRAWKRGYLLYGPPGTGKSSLVAAMANYL 268
F +A + K ++E +D F++ + +K++G +G LL GPPGTGK+ L A+A
Sbjct: 164 FSDVAGADEEKQELIEIVD-FLKDNKKFKQMGSRIPKGVLLVGPPGTGKTLLARAVAGEA 222
Query: 269 KFDVFDLQLGNVTRDSDLRTLLLSTGNRSILVI-----EDIDCSVDLPDRRNGNENNADA 323
F + SD + + G + + ++ C + + + DA
Sbjct: 223 GAPFFSIS------GSDFVEMFVGVGASRVRDLFENAKKNAPCIIFI--------DEIDA 268
Query: 324 QSKAAGAAVRKNKTDFAGGKGQHMLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPA 383
+ GA V GG + TL+ LL +DG + G I++ TN + LDPA
Sbjct: 269 VGRQRGAGV-------GGGHDEREQTLNQLLVEMDGFGENEG--IIMIAATNRPDILDPA 319
Query: 384 LLRPGRMDMHIHMS 397
LLRPGR D I +
Sbjct: 320 LLRPGRFDRQIQVG 333
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 194,254,391
Number of Sequences: 539616
Number of extensions: 8340559
Number of successful extensions: 31815
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1025
Number of HSP's successfully gapped in prelim test: 310
Number of HSP's that attempted gapping in prelim test: 29969
Number of HSP's gapped (non-prelim): 1812
length of query: 525
length of database: 191,569,459
effective HSP length: 122
effective length of query: 403
effective length of database: 125,736,307
effective search space: 50671731721
effective search space used: 50671731721
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)