Your job contains 1 sequence.
>009792
MAGIRFSILKSLCSSSIYPSFKPRLLHTSNSYFKLARYAEQKHVKLSCAVVNNNYDNSRL
HSALNSINNQLKVHGFAPIGKTQCHKANAVSSYLPTSKNFCSRRLATFASISPFLGHRSY
SSFFGSKTDKSTEIDVPAASSGSETDVSNHGIVGSDSFDKIKDAWKSVVDGVSYTGQKAK
DELSPQIEQLLDAHPYLRDVIVPVSCYLTGTVLAWVVMPRVLRRFHKYAIQGPVSLLSGG
LSIEQVPYEKSFWGALEDPVRYLITFMAFVQIGMMVAPTTIASQYLAQAWRGAVILSFVW
FLHRWKTNVFTRAMASQSIAGLDREKMLALDRISSVGLFVIGLMALAEACGVAVQSILTV
GGIGGVATAFASRDVLGNVLSGLSMQFSKPFSLGDTIKAGSVEGQVVEMGLTTTTLLSAE
KFPVIVPNSMFSSQVIVNKSRAPWRALVIRIPMQIDDLDKVPQISDDVKSMLRSNTKVFL
GKEAPYCFLSQIESSFAELNVGCNLKQMVKFLFSCFNCINFIFLN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 009792
(525 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2126061 - symbol:AT4G00290 species:3702 "Arabi... 1387 7.8e-142 1
TAIR|locus:505006411 - symbol:AT4G00234 "AT4G00234" speci... 725 1.1e-71 1
UNIPROTKB|P0AEB5 - symbol:ynaI "mechanosensitive channel ... 262 6.4e-22 1
UNIPROTKB|Q83CN5 - symbol:CBU_1075 "Mechanosensitive ion ... 233 6.3e-17 1
TIGR_CMR|CBU_1075 - symbol:CBU_1075 "membrane protein, pu... 233 6.3e-17 1
TIGR_CMR|GSU_2316 - symbol:GSU_2316 "mechanosensitive ion... 189 6.8e-13 2
UNIPROTKB|Q74AJ7 - symbol:GSU2357 "Mechanosensitive ion c... 193 1.8e-12 1
TIGR_CMR|GSU_2357 - symbol:GSU_2357 "conserved hypothetic... 193 1.8e-12 1
TIGR_CMR|NSE_0847 - symbol:NSE_0847 "mechanosensitive ion... 189 4.4e-12 1
UNIPROTKB|Q74CP0 - symbol:mscS-1 "Small-conductance mecha... 190 4.6e-12 1
TIGR_CMR|GSU_1633 - symbol:GSU_1633 "conserved hypothetic... 190 4.6e-12 1
UNIPROTKB|P0C0S1 - symbol:mscS "mechanosensitive channel ... 182 1.2e-11 1
UNIPROTKB|Q9KR91 - symbol:VC1751 "Putative uncharacterize... 181 1.9e-11 1
TIGR_CMR|VC_1751 - symbol:VC_1751 "conserved hypothetical... 181 1.9e-11 1
TIGR_CMR|CJE_0289 - symbol:CJE_0289 "mechanosensitive ion... 170 2.5e-09 1
UNIPROTKB|P77338 - symbol:mscK "potassium dependent mecha... 167 1.2e-08 1
TAIR|locus:2015297 - symbol:MSL3 "MSCS-like 3" species:37... 162 2.1e-08 1
TIGR_CMR|CHY_0033 - symbol:CHY_0033 "mechanosensitive ion... 154 2.5e-08 1
UNIPROTKB|Q9KUN5 - symbol:VC_0480 "Putative uncharacteriz... 154 2.6e-08 1
TIGR_CMR|VC_0480 - symbol:VC_0480 "conserved hypothetical... 154 2.6e-08 1
TIGR_CMR|CPS_1419 - symbol:CPS_1419 "mechanosensitive ion... 150 6.7e-08 1
TAIR|locus:2142414 - symbol:MSL2 "MSCS-like 2" species:37... 154 1.6e-07 1
UNIPROTKB|Q8EC05 - symbol:mscS "Small conductance mechano... 144 3.2e-07 1
TIGR_CMR|SO_3340 - symbol:SO_3340 "conserved hypothetical... 144 3.2e-07 1
TIGR_CMR|SPO_3496 - symbol:SPO_3496 "mechanosensitive ion... 142 4.9e-07 1
TIGR_CMR|SPO_3437 - symbol:SPO_3437 "transporter, small c... 145 8.0e-07 1
TIGR_CMR|CPS_4603 - symbol:CPS_4603 "transporter, small c... 135 3.4e-06 1
TIGR_CMR|CPS_1746 - symbol:CPS_1746 "mechanosensitive ion... 140 3.7e-06 1
TIGR_CMR|CPS_1934 - symbol:CPS_1934 "mechanosensitive ion... 132 8.5e-06 1
UNIPROTKB|P39285 - symbol:mscM "mechanosensitive channel ... 139 1.3e-05 1
TIGR_CMR|GSU_1557 - symbol:GSU_1557 "mechanosensitive ion... 129 1.6e-05 1
TIGR_CMR|BA_5726 - symbol:BA_5726 "mechanosensitive ion c... 129 2.0e-05 1
UNIPROTKB|Q721F3 - symbol:LMOf2365_1034 "Mechanosensitive... 127 2.9e-05 1
TIGR_CMR|CPS_0104 - symbol:CPS_0104 "mechanosensitive ion... 127 3.3e-05 2
UNIPROTKB|Q883Q3 - symbol:PSPTO_2297 "Membrane protein, p... 124 6.0e-05 1
TIGR_CMR|CPS_0969 - symbol:CPS_0969 "transporter, small c... 134 6.6e-05 2
TIGR_CMR|SPO_1922 - symbol:SPO_1922 "transporter, small c... 137 8.7e-05 2
TIGR_CMR|GSU_1723 - symbol:GSU_1723 "mechanosensitive ion... 127 0.00010 1
POMBASE|SPAC2C4.17c - symbol:SPAC2C4.17c "MS ion channel ... 125 0.00030 1
TIGR_CMR|SO_0588 - symbol:SO_0588 "transporter, putative"... 126 0.00031 1
>TAIR|locus:2126061 [details] [associations]
symbol:AT4G00290 species:3702 "Arabidopsis thaliana"
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0016020 "membrane"
evidence=IEA;ISS] [GO:0055085 "transmembrane transport"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR006685 InterPro:IPR011014 Pfam:PF00924
GO:GO:0016021 GO:GO:0005739 EMBL:CP002687 GO:GO:0031966
GO:GO:0009941 GO:GO:0005216 EMBL:AF013293 EMBL:AF195115
EMBL:AL161471 InterPro:IPR010920 SUPFAM:SSF50182 GO:GO:0004146
SUPFAM:SSF82861 eggNOG:COG0668 EMBL:AY064027 EMBL:AY096611
EMBL:AK176463 EMBL:AK176579 IPI:IPI00546994 PIR:T01542
RefSeq:NP_567165.2 UniGene:At.27096 ProteinModelPortal:Q8VZL4
SMR:Q8VZL4 PRIDE:Q8VZL4 EnsemblPlants:AT4G00290.1 GeneID:828077
KEGG:ath:AT4G00290 TAIR:At4g00290 HOGENOM:HOG000030145
InParanoid:Q8VZL4 OMA:AELTIGC PhylomeDB:Q8VZL4
ProtClustDB:CLSN2690271 Genevestigator:Q8VZL4 Uniprot:Q8VZL4
Length = 497
Score = 1387 (493.3 bits), Expect = 7.8e-142, P = 7.8e-142
Identities = 285/462 (61%), Positives = 347/462 (75%)
Query: 62 SALNSINNQLKVHGFAPI--GKTQCH-KANAVSSYL------PTSKNFCSR-RLATFASI 111
S L SI +K H A G H +A + L P+ +F S RL A
Sbjct: 7 SLLKSIQRSIKPHATAKSCSGLLNSHARAFTCGNLLDGPKASPSMISFSSNIRLHNDAKP 66
Query: 112 SPFLGHRSYSSFFGSKTDKSTEIDVPAASSGSETDVSNHGIVGSDSFDKIKDAWKSVVDG 171
+LGH SY+ F SK+D I V + +GS N G+D +K KD ++ VD
Sbjct: 67 FNYLGHSSYARAFSSKSDDFGSI-VASGVTGSGDGNGN----GNDWVEKAKDVLQTSVDA 121
Query: 172 VSYTGQKAKD---ELSPQIEQLLDAHPYLRDVIVPVSCYLTGTVLAWVVMPRVLRRFHKY 228
V+ T +K KD E+ P ++Q LD++PYL+DVIVPVS +TGT+ AWVVMPR+LRRFH Y
Sbjct: 122 VTETAKKTKDVSDEMIPHVQQFLDSNPYLKDVIVPVSLTMTGTLFAWVVMPRILRRFHTY 181
Query: 229 AIQGPVSLLSGGLSIEQVPYEKSFWGALEDPVRYLITFMAFVQIGMMVAPTTIASQYLAQ 288
A+Q LL G S E VPYEKSFWGALEDP RYL+TF+AF QI MVAPTTIA+QY +
Sbjct: 182 AMQSSAKLLPVGFSNEDVPYEKSFWGALEDPARYLVTFIAFAQIAAMVAPTTIAAQYFSP 241
Query: 289 AWRGAVILSFVWFLHRWKTNVFTRAMASQSIAGLDREKMLALDRISSVGLFVIGLMALAE 348
+GAVILS VWFL+RWKTNV TR ++++S GLDREK+L LD++SSVGLF IGLMA AE
Sbjct: 242 TVKGAVILSLVWFLYRWKTNVITRMLSAKSFGGLDREKVLTLDKVSSVGLFAIGLMASAE 301
Query: 349 ACGVAVQSILTVGGIGGVATAFASRDVLGNVLSGLSMQFSKPFSLGDTIKAGSVEGQVVE 408
ACGVAVQSILTVGG+GGVATAFA+RD+LGNVLSGLSMQFS+PFS+GDTIKAGSVEGQV+E
Sbjct: 302 ACGVAVQSILTVGGVGGVATAFAARDILGNVLSGLSMQFSRPFSMGDTIKAGSVEGQVIE 361
Query: 409 MGLTTTTLLSAEKFPVIVPNSMFSSQVIVNKSRAPWRALVIRIPMQIDDLDKVPQISDDV 468
MGLTTT+LL+AEKFPV+VPNS+FSSQVIVNKSRA WRA+ +IP+QIDDLD +PQIS+++
Sbjct: 362 MGLTTTSLLNAEKFPVLVPNSLFSSQVIVNKSRAQWRAIASKIPLQIDDLDMIPQISNEI 421
Query: 469 KSMLRSNTKVFLGKEAPYCFLSQIESSFAELNVGCNLKQMVK 510
K MLRSNTKVFLGKEAP+C+LS++E SFAEL +GCNL +M K
Sbjct: 422 KEMLRSNTKVFLGKEAPHCYLSRVEKSFAELTIGCNLIRMGK 463
>TAIR|locus:505006411 [details] [associations]
symbol:AT4G00234 "AT4G00234" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] EMBL:CP002687 IPI:IPI00540799 RefSeq:NP_567158.1
UniGene:At.54054 EnsemblPlants:AT4G00234.1 GeneID:826310
KEGG:ath:AT4G00234 Uniprot:F4JH25
Length = 263
Score = 725 (260.3 bits), Expect = 1.1e-71, P = 1.1e-71
Identities = 151/267 (56%), Positives = 191/267 (71%)
Query: 99 NFCSR-RLATFASISPFLGHRSYSSFFGSKTDKSTEIDVPAASSGSETDVSNHGIVGSDS 157
+F S RL + A +L H SY+ F SK+D I V + +GS N G+D
Sbjct: 3 SFSSNIRLHSDAKPFNYLSHSSYARAFSSKSDDFGSI-VASGVTGSGD--GN----GNDW 55
Query: 158 FDKIKDAWKSVVDGVSYTGQKAKD---ELSPQIEQLLDAHPYLRDVIVPVSCYLTGTVLA 214
+K KD ++ V+ V+ T +K KD E+ P ++Q LD++PYL+DVIVPVS +TGT+ A
Sbjct: 56 VEKAKDVVQTSVNAVAETAKKTKDVSDEMIPHVQQFLDSNPYLKDVIVPVSLTVTGTLFA 115
Query: 215 WVVMPRVLRRFHKYAIQGPVSLLSGGLSIEQVPYEKSFWGALEDPVRYLITFMAFVQIGM 274
W+VMPR+LRRFH YA+Q LL G S E +PYEKSFWGALEDP RYL+TF+AF QI
Sbjct: 116 WIVMPRILRRFHTYAMQSSAKLLPVGFSNEDIPYEKSFWGALEDPARYLVTFIAFAQIAA 175
Query: 275 MVAPTTIASQYLAQAWRGAVILSFVWFLHRWKTNVFTRAMASQSIAGLDREKMLALDRIS 334
MVAPTTIA+QY + +GAVILS VWFL+RWKTNV TR ++++S GLDR+K+L LD++S
Sbjct: 176 MVAPTTIAAQYFSPTVKGAVILSVVWFLYRWKTNVITRMLSAKSFGGLDRDKVLTLDKVS 235
Query: 335 SVGLFVIGLMALAEACGVAVQSILTVG 361
SVGLF IGLMA AEACGVAVQSILTVG
Sbjct: 236 SVGLFAIGLMASAEACGVAVQSILTVG 262
>UNIPROTKB|P0AEB5 [details] [associations]
symbol:ynaI "mechanosensitive channel YnaI monomer"
species:83333 "Escherichia coli K-12" [GO:0055085 "transmembrane
transport" evidence=IEA] [GO:0071470 "cellular response to osmotic
stress" evidence=IGI] [GO:0005887 "integral to plasma membrane"
evidence=RCA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0008381 "mechanically-gated ion channel activity"
evidence=IGI;ISS] [GO:0006811 "ion transport" evidence=ISS]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] InterPro:IPR006685 InterPro:IPR006686
InterPro:IPR011014 InterPro:IPR011066 Pfam:PF00924 PROSITE:PS01246
GO:GO:0016021 GO:GO:0005886 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0055085
InterPro:IPR010920 SUPFAM:SSF50182 GO:GO:0004146 SUPFAM:SSF82689
SUPFAM:SSF82861 eggNOG:COG0668 PIR:E64882 RefSeq:NP_415846.1
RefSeq:YP_489600.1 ProteinModelPortal:P0AEB5 SMR:P0AEB5
EnsemblBacteria:EBESCT00000000495 EnsemblBacteria:EBESCT00000015742
GeneID:12931148 GeneID:945898 KEGG:ecj:Y75_p1307 KEGG:eco:b1330
PATRIC:32117936 EchoBASE:EB3683 EcoGene:EG13924
HOGENOM:HOG000060775 KO:K16052 OMA:ERKTIMF ProtClustDB:CLSK880101
BioCyc:EcoCyc:MONOMER0-82 BioCyc:ECOL316407:JW1323-MONOMER
Genevestigator:P0AEB5 Uniprot:P0AEB5
Length = 343
Score = 262 (97.3 bits), Expect = 6.4e-22, P = 6.4e-22
Identities = 67/219 (30%), Positives = 113/219 (51%)
Query: 293 AVILSFVWFLHRWKTNVFTRAMASQSIAGLDREKMLALDRISSVGLFVIGLMALAEACGV 352
AVIL+ FL N F + + G D + RI + + V+ ++ E G+
Sbjct: 87 AVILTIKLFL---LINQFEKQQIKK---GRDITSARIMSRIIKITIIVVLVLLYGEHFGM 140
Query: 353 AVQSILTVGGIGGVATAFASRDVLGNVLSGLSMQFSKPFSLGDTIKAG--SVEGQVVEMG 410
++ +LT GGIGG+A A +D+L N SG+ + F +PFS+GD I++ ++EG V E+G
Sbjct: 141 SLSGLLTFGGIGGLAVGMAGKDILSNFFSGIMLYFDRPFSIGDWIRSPDRNIEGTVAEIG 200
Query: 411 LTTTTLLSAEKFPVIVPNSMFSSQVIVNKSRAPWRALVIRIPMQIDDLDKVPQISDDVKS 470
T + + + P+ VPNS+FSS + N R R + I ++ +D KV I + V+
Sbjct: 201 WRITKITTFDNRPLYVPNSLFSSISVENPGRMTNRRITTTIGLRYEDAAKVGVIVEAVRE 260
Query: 471 MLRSNTKVFLGKEAPYCFLSQIESSFAELNVGCNLKQMV 509
ML+++ + ++ + +Q S + V C K V
Sbjct: 261 MLKNHPAIDQ-RQTLLVYFNQFADSSLNIMVYCFTKTTV 298
>UNIPROTKB|Q83CN5 [details] [associations]
symbol:CBU_1075 "Mechanosensitive ion channel"
species:227377 "Coxiella burnetii RSA 493" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR006685 InterPro:IPR006686
InterPro:IPR011014 InterPro:IPR011066 Pfam:PF00924 PROSITE:PS01246
GO:GO:0016020 GO:GO:0055085 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR010920 SUPFAM:SSF50182 GO:GO:0004146 SUPFAM:SSF82689
SUPFAM:SSF82861 HOGENOM:HOG000060775 KO:K16052 OMA:WAHIGVA
RefSeq:NP_820074.1 ProteinModelPortal:Q83CN5 GeneID:1208976
KEGG:cbu:CBU_1075 PATRIC:17930877 ProtClustDB:CLSK914522
BioCyc:CBUR227377:GJ7S-1066-MONOMER Uniprot:Q83CN5
Length = 383
Score = 233 (87.1 bits), Expect = 6.3e-17, P = 6.3e-17
Identities = 71/292 (24%), Positives = 141/292 (48%)
Query: 190 LLDAHPYLRDVIVPVSCYLTGTVLAWVVMPRVLRRFHKYAIQGPVSLLSGGLSIEQVPYE 249
LL+ H + +++ + + L W++ R+L RF + + V L + ++ Q P +
Sbjct: 4 LLNTHNSIIKIVLLLIIGSIASFLEWLLYRRLLPRFQR---RQRVWLQAFLQALHQ-PLQ 59
Query: 250 KSFWGALEDPVRYLITFMAFVQIGMMVAPTTIASQYLAQAWRGAVILSFVWFLHRWKTNV 309
W + V ++ + F G A ++S L + VI F R+ +
Sbjct: 60 VYIWVIILSFVASILATLFFFNGGFTDA---LSSTRLI--FTLVVIFWFAMRFIRYLEDG 114
Query: 310 FTRAMASQSIAGL-DREKMLALDRISSVGLFVIGLMALAEACGVAVQSILTVGGIGGVAT 368
T A Q + + D + A+ +++ V + L+ L + G+ + ++L GG+G
Sbjct: 115 MTH-QARQKVGKVSDETSVHAIAQLTRVVIIAFVLLMLLQTIGIKISALLAFGGVGVAVI 173
Query: 369 AFASRDVLGNVLSGLSMQFSKPFSLGDTIKAGS--VEGQVVEMGLTTTTLLSAEKFPVIV 426
FA++D LGN G+ + + +PFS+GD I++ +EG V +G T + + +K + V
Sbjct: 174 GFAAKDTLGNFFGGMMIYWDRPFSVGDWIRSPDRQIEGTVENIGWRLTRIRTFDKRSLYV 233
Query: 427 PNSMFSSQVIVNKSRAPWRALVIRIPMQIDDLDKVPQISDDVKSMLRSNTKV 478
PN + S+ + N SR R L I + ++ D K+ ++ ++ MLR++ ++
Sbjct: 234 PNGILSNVAVENPSRMTNRRLKIIVGVRYSDASKIMDLAKAIEEMLRNDPEI 285
>TIGR_CMR|CBU_1075 [details] [associations]
symbol:CBU_1075 "membrane protein, putative"
species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016020 "membrane" evidence=ISS]
InterPro:IPR006685 InterPro:IPR006686 InterPro:IPR011014
InterPro:IPR011066 Pfam:PF00924 PROSITE:PS01246 GO:GO:0016020
GO:GO:0055085 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR010920 SUPFAM:SSF50182 GO:GO:0004146 SUPFAM:SSF82689
SUPFAM:SSF82861 HOGENOM:HOG000060775 KO:K16052 OMA:WAHIGVA
RefSeq:NP_820074.1 ProteinModelPortal:Q83CN5 GeneID:1208976
KEGG:cbu:CBU_1075 PATRIC:17930877 ProtClustDB:CLSK914522
BioCyc:CBUR227377:GJ7S-1066-MONOMER Uniprot:Q83CN5
Length = 383
Score = 233 (87.1 bits), Expect = 6.3e-17, P = 6.3e-17
Identities = 71/292 (24%), Positives = 141/292 (48%)
Query: 190 LLDAHPYLRDVIVPVSCYLTGTVLAWVVMPRVLRRFHKYAIQGPVSLLSGGLSIEQVPYE 249
LL+ H + +++ + + L W++ R+L RF + + V L + ++ Q P +
Sbjct: 4 LLNTHNSIIKIVLLLIIGSIASFLEWLLYRRLLPRFQR---RQRVWLQAFLQALHQ-PLQ 59
Query: 250 KSFWGALEDPVRYLITFMAFVQIGMMVAPTTIASQYLAQAWRGAVILSFVWFLHRWKTNV 309
W + V ++ + F G A ++S L + VI F R+ +
Sbjct: 60 VYIWVIILSFVASILATLFFFNGGFTDA---LSSTRLI--FTLVVIFWFAMRFIRYLEDG 114
Query: 310 FTRAMASQSIAGL-DREKMLALDRISSVGLFVIGLMALAEACGVAVQSILTVGGIGGVAT 368
T A Q + + D + A+ +++ V + L+ L + G+ + ++L GG+G
Sbjct: 115 MTH-QARQKVGKVSDETSVHAIAQLTRVVIIAFVLLMLLQTIGIKISALLAFGGVGVAVI 173
Query: 369 AFASRDVLGNVLSGLSMQFSKPFSLGDTIKAGS--VEGQVVEMGLTTTTLLSAEKFPVIV 426
FA++D LGN G+ + + +PFS+GD I++ +EG V +G T + + +K + V
Sbjct: 174 GFAAKDTLGNFFGGMMIYWDRPFSVGDWIRSPDRQIEGTVENIGWRLTRIRTFDKRSLYV 233
Query: 427 PNSMFSSQVIVNKSRAPWRALVIRIPMQIDDLDKVPQISDDVKSMLRSNTKV 478
PN + S+ + N SR R L I + ++ D K+ ++ ++ MLR++ ++
Sbjct: 234 PNGILSNVAVENPSRMTNRRLKIIVGVRYSDASKIMDLAKAIEEMLRNDPEI 285
>TIGR_CMR|GSU_2316 [details] [associations]
symbol:GSU_2316 "mechanosensitive ion channel family
protein" species:243231 "Geobacter sulfurreducens PCA" [GO:0005216
"ion channel activity" evidence=ISS] [GO:0006810 "transport"
evidence=ISS] InterPro:IPR006685 InterPro:IPR011014
InterPro:IPR011066 Pfam:PF00924 GO:GO:0016020 GO:GO:0055085
EMBL:AE017180 GenomeReviews:AE017180_GR InterPro:IPR010920
SUPFAM:SSF50182 GO:GO:0004146 SUPFAM:SSF82689 SUPFAM:SSF82861
HOGENOM:HOG000224337 RefSeq:NP_953365.1 ProteinModelPortal:Q74AN6
GeneID:2687375 KEGG:gsu:GSU2316 PATRIC:22027487 OMA:IIPNQKF
ProtClustDB:CLSK638043 BioCyc:GSUL243231:GH27-2322-MONOMER
Uniprot:Q74AN6
Length = 291
Score = 189 (71.6 bits), Expect = 6.8e-13, Sum P(2) = 6.8e-13
Identities = 36/118 (30%), Positives = 69/118 (58%)
Query: 338 LFVIGLMALAEACGVAVQSILTVGGIGGVATAFASRDVLGNVLSGLSMQFSKPFSLGDTI 397
+ IG + + + G+ + ++ + G G+ F ++++ N +SG+ + F +P +GD I
Sbjct: 79 IIAIGFIVILQTAGIDLTALNVLAGAVGIGVGFGLQNIVNNFVSGIIILFERPIKVGDRI 138
Query: 398 KAGSVEGQVVEMGLTTTTLLSAEKFPVIVPNSMFSSQVIVNKSRAPWRALVIRIPMQI 455
G+VEG VV +G +TT+++ + +IVPNS F ++ +VN S R + RIP+ +
Sbjct: 139 VVGTVEGDVVHIGGRSTTVVTNDNITIIVPNSKFITENVVNWSHNE-RKVRFRIPVSV 195
Score = 40 (19.1 bits), Expect = 6.8e-13, Sum P(2) = 6.8e-13
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 200 VIVPVSCYLTGTVLAWVV 217
V+V + YL+G + W+V
Sbjct: 37 VLVALLFYLSGKLRTWIV 54
>UNIPROTKB|Q74AJ7 [details] [associations]
symbol:GSU2357 "Mechanosensitive ion channel family
protein" species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR006685 InterPro:IPR011014 InterPro:IPR011066
Pfam:PF00924 GO:GO:0016020 GO:GO:0055085 EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR010920 SUPFAM:SSF50182
GO:GO:0004146 SUPFAM:SSF82689 SUPFAM:SSF82861 RefSeq:NP_953404.1
ProteinModelPortal:Q74AJ7 GeneID:2688088 KEGG:gsu:GSU2357
PATRIC:22027563 HOGENOM:HOG000033499 OMA:WRSTWIK
ProtClustDB:CLSK924600 BioCyc:GSUL243231:GH27-2351-MONOMER
Uniprot:Q74AJ7
Length = 348
Score = 193 (73.0 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 59/223 (26%), Positives = 109/223 (48%)
Query: 258 DPVRYLITFMAFVQ--IGMMV-APTTIASQYLA-QAWRGAVILSFVWFLHRWKTNVFTRA 313
D +R L+ + A + G+ P T+ Q LA + +IL F R T
Sbjct: 52 DSLRGLLLYSALLTGLYGVATQVPMTVGLQRLAGNIFLVTIILVATLFFMRLAAGFVTH- 110
Query: 314 MASQSIAGLDREKMLALDRISSVGLFVIGLMALAEACGVAVQSILTVGGIGGVATAFASR 373
A +++ + ++ V +F IG++ + ++ G+++ ILT G+GG+A A A +
Sbjct: 111 YAKKAVL----PSISIFSNLAKVSVFSIGILIILQSLGISIAPILTALGVGGLAVALALQ 166
Query: 374 DVLGNVLSGLSMQFSKPFSLGDTIK-AGSVEGQVVEMGLTTTTLLSAEKFPVIVPNSMFS 432
D L N+ +GL + ++ GD I+ A EG V ++ TT+ + VI+PNS +
Sbjct: 167 DTLSNIFAGLHIIATRQIRQGDYIRLASGEEGYVNDITWRNTTVQTLPNNMVIIPNSKLA 226
Query: 433 SQVIVNKSRAPWRALVIRIPMQID---DLDKVPQISDDVKSML 472
++ N + P R + + + + + DLD V +++ +V S L
Sbjct: 227 GAIVTNYN-LPDREMAVLVQVGVSYASDLDHVERVTIEVASEL 268
>TIGR_CMR|GSU_2357 [details] [associations]
symbol:GSU_2357 "conserved hypothetical protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR006685 InterPro:IPR011014 InterPro:IPR011066
Pfam:PF00924 GO:GO:0016020 GO:GO:0055085 EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR010920 SUPFAM:SSF50182
GO:GO:0004146 SUPFAM:SSF82689 SUPFAM:SSF82861 RefSeq:NP_953404.1
ProteinModelPortal:Q74AJ7 GeneID:2688088 KEGG:gsu:GSU2357
PATRIC:22027563 HOGENOM:HOG000033499 OMA:WRSTWIK
ProtClustDB:CLSK924600 BioCyc:GSUL243231:GH27-2351-MONOMER
Uniprot:Q74AJ7
Length = 348
Score = 193 (73.0 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 59/223 (26%), Positives = 109/223 (48%)
Query: 258 DPVRYLITFMAFVQ--IGMMV-APTTIASQYLA-QAWRGAVILSFVWFLHRWKTNVFTRA 313
D +R L+ + A + G+ P T+ Q LA + +IL F R T
Sbjct: 52 DSLRGLLLYSALLTGLYGVATQVPMTVGLQRLAGNIFLVTIILVATLFFMRLAAGFVTH- 110
Query: 314 MASQSIAGLDREKMLALDRISSVGLFVIGLMALAEACGVAVQSILTVGGIGGVATAFASR 373
A +++ + ++ V +F IG++ + ++ G+++ ILT G+GG+A A A +
Sbjct: 111 YAKKAVL----PSISIFSNLAKVSVFSIGILIILQSLGISIAPILTALGVGGLAVALALQ 166
Query: 374 DVLGNVLSGLSMQFSKPFSLGDTIK-AGSVEGQVVEMGLTTTTLLSAEKFPVIVPNSMFS 432
D L N+ +GL + ++ GD I+ A EG V ++ TT+ + VI+PNS +
Sbjct: 167 DTLSNIFAGLHIIATRQIRQGDYIRLASGEEGYVNDITWRNTTVQTLPNNMVIIPNSKLA 226
Query: 433 SQVIVNKSRAPWRALVIRIPMQID---DLDKVPQISDDVKSML 472
++ N + P R + + + + + DLD V +++ +V S L
Sbjct: 227 GAIVTNYN-LPDREMAVLVQVGVSYASDLDHVERVTIEVASEL 268
>TIGR_CMR|NSE_0847 [details] [associations]
symbol:NSE_0847 "mechanosensitive ion channel family
protein" species:222891 "Neorickettsia sennetsu str. Miyayama"
[GO:0005216 "ion channel activity" evidence=ISS] [GO:0006811 "ion
transport" evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
InterPro:IPR006685 InterPro:IPR011014 Pfam:PF00924 GO:GO:0016020
GO:GO:0055085 EMBL:CP000237 GenomeReviews:CP000237_GR
InterPro:IPR010920 SUPFAM:SSF50182 GO:GO:0004146 SUPFAM:SSF82861
eggNOG:COG0668 KO:K16052 RefSeq:YP_506715.1
ProteinModelPortal:Q2GCT1 STRING:Q2GCT1 GeneID:3931811
KEGG:nse:NSE_0847 PATRIC:22681691 HOGENOM:HOG000127178 OMA:DIGIRYD
ProtClustDB:CLSK2527686 BioCyc:NSEN222891:GHFU-852-MONOMER
Uniprot:Q2GCT1
Length = 337
Score = 189 (71.6 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 43/140 (30%), Positives = 78/140 (55%)
Query: 338 LFVIGLMALAEACGVAVQSILTVGGIGGVATAFASRDVLGNVLSGLSMQFSKPFSLGDTI 397
L V+GLM L + V + IL VGGIGGV AS+D+ + +++ +PF +GD I
Sbjct: 127 LLVVGLMIL-DKLNVNISGILAVGGIGGVVIGLASKDLFSSFFGFITILLDRPFKVGDLI 185
Query: 398 KAG--SVEGQVVEMGLTTTTLLSAEKFPVIVPNSMFSSQVIVNKSRAPWRALVIRIPMQI 455
+ ++ G V ++ T +++ EK P+ +PN++FS+ VI N+S R + + +
Sbjct: 186 YSSDRNIMGVVDKITWRFTRVITLEKKPMYIPNAIFSTIVIQNESEVLARRIDEVLKFEF 245
Query: 456 DDLDKVPQISDDVKSMLRSN 475
+ + +PQ + ++ L +N
Sbjct: 246 RESEMIPQFTKEMNLFLENN 265
>UNIPROTKB|Q74CP0 [details] [associations]
symbol:mscS-1 "Small-conductance mechanosensitive ion
channel" species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR006685 InterPro:IPR011014 InterPro:IPR011066
Pfam:PF00924 GO:GO:0016020 GO:GO:0055085 EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR010920 SUPFAM:SSF50182
GO:GO:0004146 SUPFAM:SSF82689 SUPFAM:SSF82861 RefSeq:NP_952684.1
ProteinModelPortal:Q74CP0 GeneID:2687218 KEGG:gsu:GSU1633
PATRIC:22026115 HOGENOM:HOG000130843 OMA:ALFFWVE
ProtClustDB:CLSK828452 BioCyc:GSUL243231:GH27-1602-MONOMER
Uniprot:Q74CP0
Length = 364
Score = 190 (71.9 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 57/211 (27%), Positives = 107/211 (50%)
Query: 294 VILSFVWFLHRWKTNVFTRAMASQSIAGLDREKMLALDRISSVGLFVIGLMALAEACGVA 353
V+ + W + + +A + G+DR+ + L+++ ++ L I LM +
Sbjct: 113 VVTNIAWRITNELLGWYGSRLAERHGGGVDRQIIPPLEKLITIFLAGIALMVVLRHFNYD 172
Query: 354 VQSILTVGGIGGVATAFASRDVLGNVLSGLSMQFSKPFSLGDTIKAGSVE-GQVVEMGLT 412
+ S++T GIG +A A+++ L N++SG ++ +PF +GD I+ S + G V ++GL
Sbjct: 173 ILSVVTALGIGSLAIGMAAKETLANMISGFTLMVDRPFRIGDRIQLASGQWGDVADIGLR 232
Query: 413 TTTLLSAEKFPVIVPNSMFSSQVIVNKSRAPWRALV-IRIPMQID-DLDKVPQISDDVKS 470
TT + + + +I+PNS + I+N + RA I + + D D+++ + V++
Sbjct: 233 TTKIKTVDNTLLIIPNSELCNTTIINLAFPDVRAKGRINVGISYDNDVERAKSLL--VET 290
Query: 471 MLRSNTKVFLGKEAPYCFLSQIESSFAELNV 501
L S +V L + AP F S LNV
Sbjct: 291 AL-SVPEV-LREPAPEAFFVSFGDS--ALNV 317
>TIGR_CMR|GSU_1633 [details] [associations]
symbol:GSU_1633 "conserved hypothetical protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR006685 InterPro:IPR011014 InterPro:IPR011066
Pfam:PF00924 GO:GO:0016020 GO:GO:0055085 EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR010920 SUPFAM:SSF50182
GO:GO:0004146 SUPFAM:SSF82689 SUPFAM:SSF82861 RefSeq:NP_952684.1
ProteinModelPortal:Q74CP0 GeneID:2687218 KEGG:gsu:GSU1633
PATRIC:22026115 HOGENOM:HOG000130843 OMA:ALFFWVE
ProtClustDB:CLSK828452 BioCyc:GSUL243231:GH27-1602-MONOMER
Uniprot:Q74CP0
Length = 364
Score = 190 (71.9 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 57/211 (27%), Positives = 107/211 (50%)
Query: 294 VILSFVWFLHRWKTNVFTRAMASQSIAGLDREKMLALDRISSVGLFVIGLMALAEACGVA 353
V+ + W + + +A + G+DR+ + L+++ ++ L I LM +
Sbjct: 113 VVTNIAWRITNELLGWYGSRLAERHGGGVDRQIIPPLEKLITIFLAGIALMVVLRHFNYD 172
Query: 354 VQSILTVGGIGGVATAFASRDVLGNVLSGLSMQFSKPFSLGDTIKAGSVE-GQVVEMGLT 412
+ S++T GIG +A A+++ L N++SG ++ +PF +GD I+ S + G V ++GL
Sbjct: 173 ILSVVTALGIGSLAIGMAAKETLANMISGFTLMVDRPFRIGDRIQLASGQWGDVADIGLR 232
Query: 413 TTTLLSAEKFPVIVPNSMFSSQVIVNKSRAPWRALV-IRIPMQID-DLDKVPQISDDVKS 470
TT + + + +I+PNS + I+N + RA I + + D D+++ + V++
Sbjct: 233 TTKIKTVDNTLLIIPNSELCNTTIINLAFPDVRAKGRINVGISYDNDVERAKSLL--VET 290
Query: 471 MLRSNTKVFLGKEAPYCFLSQIESSFAELNV 501
L S +V L + AP F S LNV
Sbjct: 291 AL-SVPEV-LREPAPEAFFVSFGDS--ALNV 317
>UNIPROTKB|P0C0S1 [details] [associations]
symbol:mscS "mechanosensitive channel MscS monomer"
species:83333 "Escherichia coli K-12" [GO:0055085 "transmembrane
transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA;IDA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008381 "mechanically-gated ion channel activity"
evidence=IDA] [GO:0009992 "cellular water homeostasis"
evidence=IMP] InterPro:IPR006685 InterPro:IPR006686
InterPro:IPR011014 InterPro:IPR011066 Pfam:PF00924 PROSITE:PS01246
GO:GO:0016021 GO:GO:0005886 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR EMBL:U28377
EMBL:X14436 GO:GO:0009992 InterPro:IPR010920 SUPFAM:SSF50182
GO:GO:0004146 GO:GO:0008381 SUPFAM:SSF82689 SUPFAM:SSF82861
eggNOG:COG0668 PIR:S04735 RefSeq:NP_417399.1 RefSeq:YP_491124.1
PDB:2OAU PDB:2VV5 PDB:3UDC PDBsum:2OAU PDBsum:2VV5 PDBsum:3UDC
ProteinModelPortal:P0C0S1 SMR:P0C0S1 DIP:DIP-36192N IntAct:P0C0S1
TCDB:1.A.23.2.1 PRIDE:P0C0S1 EnsemblBacteria:EBESCT00000002152
EnsemblBacteria:EBESCT00000017694 GeneID:12930244 GeneID:947416
KEGG:ecj:Y75_p2855 KEGG:eco:b2924 PATRIC:32121262 EchoBASE:EB1149
EcoGene:EG11160 HOGENOM:HOG000110050 KO:K03442 OMA:SWLVRNQ
ProtClustDB:PRK10334 BioCyc:EcoCyc:EG11160-MONOMER
BioCyc:ECOL316407:JW2891-MONOMER EvolutionaryTrace:P0C0S1
Genevestigator:P0C0S1 InterPro:IPR008910 Pfam:PF05552
Uniprot:P0C0S1
Length = 286
Score = 182 (69.1 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 54/210 (25%), Positives = 98/210 (46%)
Query: 275 MVAPTTIASQYLAQAWRGAVILSFVWFLHRWKTNVFTRAMASQSIAGLDREKMLALDRIS 334
+VA + Y I+ + R +N R M S+ I + + AL R
Sbjct: 17 LVANQALLLSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRY- 75
Query: 335 SVGLFVIGLMALAEACGVAVQSILTVGGIGGVATAFASRDVLGNVLSGLSMQFSKPFSLG 394
G+ L+A GV S++ V G G+A A + L N+ +G+ + +PF G
Sbjct: 76 --GIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAG 133
Query: 395 DTIKAGSVEGQVVEMGLTTTTLLSAEKFPVIVPNSMFSSQVIVNKSRAPWRALVIRIPMQ 454
+ + G V G V+ + + +TT+ +A+ +++PN + I+N SR P R I +
Sbjct: 134 EYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVA 193
Query: 455 ID-DLDKVPQISDDVKSMLRSNTKVFLGKE 483
D D+D+V QI + ++++S ++ +E
Sbjct: 194 YDSDIDQVKQI---LTNIIQSEDRILKDRE 220
>UNIPROTKB|Q9KR91 [details] [associations]
symbol:VC1751 "Putative uncharacterized protein VC1751"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR006685 InterPro:IPR011014
InterPro:IPR011066 Pfam:PF00924 GO:GO:0016020
GenomeReviews:AE003852_GR GO:GO:0055085 InterPro:IPR010920
SUPFAM:SSF50182 GO:GO:0004146 SUPFAM:SSF82689 SUPFAM:SSF82861
KO:K03442 OMA:YFGIQTT HSSP:P11666 EMBL:AE004252 PIR:C82162
RefSeq:NP_231387.1 ProteinModelPortal:Q9KR91 DNASU:2613756
GeneID:2613756 KEGG:vch:VC1751 PATRIC:20082554
ProtClustDB:CLSK794351 Uniprot:Q9KR91
Length = 292
Score = 181 (68.8 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 48/136 (35%), Positives = 72/136 (52%)
Query: 338 LFVIGLMALAEACGVAVQSILTVGGIGGVATAFASRDVLGNVLSGLSMQFSKPFSLGDTI 397
++VIG++ G+ + +LT GI GV FA +D L N +G+ + +PF +GD +
Sbjct: 76 VWVIGILVGLSQIGLNLAPVLTGFGIAGVIIGFALQDTLSNFAAGMMLLIYRPFDVGDFV 135
Query: 398 KAGSVEGQVVEMGLTTTTLLSAEKFPVIVPNSMFSSQVIVNKSRAPWRA--LVIRIPMQI 455
AG V+G+V M L TT+ + + +IVPNS VI N + R +V I
Sbjct: 136 HAGGVDGKVSHMSLVNTTIRTFDNQIIIVPNSKIWGDVIKNVTHERIRRVDMVFGIGYS- 194
Query: 456 DDLDKVPQI-SDDVKS 470
DDL K + +D VKS
Sbjct: 195 DDLLKAEAVLTDIVKS 210
>TIGR_CMR|VC_1751 [details] [associations]
symbol:VC_1751 "conserved hypothetical protein" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR006685
InterPro:IPR011014 InterPro:IPR011066 Pfam:PF00924 GO:GO:0016020
GenomeReviews:AE003852_GR GO:GO:0055085 InterPro:IPR010920
SUPFAM:SSF50182 GO:GO:0004146 SUPFAM:SSF82689 SUPFAM:SSF82861
KO:K03442 OMA:YFGIQTT HSSP:P11666 EMBL:AE004252 PIR:C82162
RefSeq:NP_231387.1 ProteinModelPortal:Q9KR91 DNASU:2613756
GeneID:2613756 KEGG:vch:VC1751 PATRIC:20082554
ProtClustDB:CLSK794351 Uniprot:Q9KR91
Length = 292
Score = 181 (68.8 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 48/136 (35%), Positives = 72/136 (52%)
Query: 338 LFVIGLMALAEACGVAVQSILTVGGIGGVATAFASRDVLGNVLSGLSMQFSKPFSLGDTI 397
++VIG++ G+ + +LT GI GV FA +D L N +G+ + +PF +GD +
Sbjct: 76 VWVIGILVGLSQIGLNLAPVLTGFGIAGVIIGFALQDTLSNFAAGMMLLIYRPFDVGDFV 135
Query: 398 KAGSVEGQVVEMGLTTTTLLSAEKFPVIVPNSMFSSQVIVNKSRAPWRA--LVIRIPMQI 455
AG V+G+V M L TT+ + + +IVPNS VI N + R +V I
Sbjct: 136 HAGGVDGKVSHMSLVNTTIRTFDNQIIIVPNSKIWGDVIKNVTHERIRRVDMVFGIGYS- 194
Query: 456 DDLDKVPQI-SDDVKS 470
DDL K + +D VKS
Sbjct: 195 DDLLKAEAVLTDIVKS 210
>TIGR_CMR|CJE_0289 [details] [associations]
symbol:CJE_0289 "mechanosensitive ion channel family
protein" species:195099 "Campylobacter jejuni RM1221" [GO:0005216
"ion channel activity" evidence=ISS] [GO:0006811 "ion transport"
evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
InterPro:IPR006685 InterPro:IPR011014 InterPro:IPR011066
Pfam:PF00924 GO:GO:0016020 GO:GO:0055085 EMBL:CP000025
GenomeReviews:CP000025_GR InterPro:IPR010920 SUPFAM:SSF50182
GO:GO:0004146 SUPFAM:SSF82689 SUPFAM:SSF82861 eggNOG:COG0668
KO:K16052 RefSeq:YP_178311.1 ProteinModelPortal:Q5HWM4
STRING:Q5HWM4 GeneID:3231051 KEGG:cjr:CJE0289 PATRIC:20042276
HOGENOM:HOG000104707 OMA:YCFSKTV ProtClustDB:CLSK872482
BioCyc:CJEJ195099:GJC0-294-MONOMER Uniprot:Q5HWM4
Length = 627
Score = 170 (64.9 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 59/232 (25%), Positives = 111/232 (47%)
Query: 256 LEDPVRYLITFMAF---VQIGMMVAPTTI-ASQYLAQAWRGAVILSFVWFLHRWKTN--- 308
++ PV +L+ A + I AP ++ S + + AV+++ W + R
Sbjct: 296 IKKPVGFLLIVYAISLCLTIATYPAPLSVNLSNFFHIVY--AVLIA--WLILRMLDGYGV 351
Query: 309 VFTRAMASQSIAGLDREKMLALDRISSVGLFVIGLMALAEACGVAVQSILTVGGIGGVAT 368
V +A +S G +E + + +I + +I L+ + G + +I+ GIGG+A
Sbjct: 352 VLVSKLAQKS--G-KKEVVNLIIKILYFVIIIIALLYILAQLGFNISAIIASLGIGGLAV 408
Query: 369 AFASRDVLGNVLSGLSMQFSKPFSLGDTIKAGSVEGQVVEMGLTTTTLLSAEKFPVIVPN 428
A A++D++ N + + + F F+ GD ++ +EG VVE GL TT+ + + V +PN
Sbjct: 409 ALAAKDIIANFFASILLLFDNSFNQGDWVEVSGIEGTVVETGLRKTTIRTFDNCLVFLPN 468
Query: 429 SMFSSQVIVNKS-RAPWRALVIRIPMQIDDL-DKVPQISDDVKSMLRSNTKV 478
S I N S R R + + + + D +K+ Q D++ L ++ V
Sbjct: 469 STIMGANIKNWSKRRMGRHVRMYLGVGYDATPEKLEQCVKDLREFLHTSDLV 520
>UNIPROTKB|P77338 [details] [associations]
symbol:mscK "potassium dependent mechanosensitive channel
MscK" species:83333 "Escherichia coli K-12" [GO:0055085
"transmembrane transport" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006813
"potassium ion transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0008381
"mechanically-gated ion channel activity" evidence=IGI] [GO:0009992
"cellular water homeostasis" evidence=IMP] InterPro:IPR006685
InterPro:IPR006686 InterPro:IPR011014 InterPro:IPR011066
Pfam:PF00924 PROSITE:PS01246 GO:GO:0016021 GO:GO:0005886
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006813 EMBL:U82664 GO:GO:0009992
InterPro:IPR010920 SUPFAM:SSF50182 GO:GO:0004146 EMBL:Y07802
PIR:H64776 RefSeq:NP_414998.1 RefSeq:YP_488756.1
ProteinModelPortal:P77338 SMR:P77338 DIP:DIP-10070N IntAct:P77338
TCDB:1.A.23.1.1 PRIDE:P77338 EnsemblBacteria:EBESCT00000003459
EnsemblBacteria:EBESCT00000016205 GeneID:12930848 GeneID:945132
KEGG:ecj:Y75_p0452 KEGG:eco:b0465 PATRIC:32116083 EchoBASE:EB3991
EcoGene:EG14240 eggNOG:COG3264 HOGENOM:HOG000280842 KO:K05802
OMA:SKLQWLF ProtClustDB:PRK11281 BioCyc:EcoCyc:G6255-MONOMER
BioCyc:ECOL316407:JW0454-MONOMER Genevestigator:P77338
GO:GO:0008381 InterPro:IPR025692 Pfam:PF12794 SUPFAM:SSF82689
SUPFAM:SSF82861 Uniprot:P77338
Length = 1120
Score = 167 (63.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 47/175 (26%), Positives = 86/175 (49%)
Query: 293 AVILSFV-WFLHRWKTNVFTRAMASQSIAGLDREKMLALDRISSVGLFVIGLMALAEACG 351
A+I S V W L R + + S+ + + A+ I + + +G M + + G
Sbjct: 849 AIIASMVAWALIRNLPGLLEVLVLSR--LNMRQGASYAITTILNYIIIAVGAMTVFGSLG 906
Query: 352 VAVQSILTVGGIGGVATAFASRDVLGNVLSGLSMQFSKPFSLGDTIKAGSVEGQVVEMGL 411
V+ + + V F +++ GN +SGL + F +P +GDT+ GS G V ++ +
Sbjct: 907 VSWDKLQWLAAALSVGLGFGLQEIFGNFVSGLIILFERPVRIGDTVTIGSFSGTVSKIRI 966
Query: 412 TTTTLLSAEKFPVIVPNSMFSSQVIVNKSRAPWRA-LVIRIPMQI-DDLDKVPQI 464
TT+ ++ VI+PN F ++ ++N S LVIR+ + DL+KV ++
Sbjct: 967 RATTITDFDRKEVIIPNKAFVTERLINWSLTDTTTRLVIRLGVAYGSDLEKVRKV 1021
>TAIR|locus:2015297 [details] [associations]
symbol:MSL3 "MSCS-like 3" species:3702 "Arabidopsis
thaliana" [GO:0005886 "plasma membrane" evidence=ISM] [GO:0016020
"membrane" evidence=IEA;ISS] [GO:0055085 "transmembrane transport"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IGI]
[GO:0006970 "response to osmotic stress" evidence=IGI] [GO:0009526
"plastid envelope" evidence=IDA] [GO:0009657 "plastid organization"
evidence=IGI] [GO:0010020 "chloroplast fission" evidence=IGI]
[GO:0009694 "jasmonic acid metabolic process" evidence=RCA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=RCA]
InterPro:IPR006685 Pfam:PF00924 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0031969 GO:GO:0006970 GO:GO:0005216
GO:GO:0010020 InterPro:IPR010920 SUPFAM:SSF50182 GO:GO:0004146
EMBL:AC079131 eggNOG:COG0668 HOGENOM:HOG000083399
ProtClustDB:CLSN2680522 GO:GO:0009526 EMBL:AC073943 EMBL:AY125504
EMBL:BT002720 IPI:IPI00544472 PIR:D96615 RefSeq:NP_176116.2
RefSeq:NP_974046.1 UniGene:At.28105 ProteinModelPortal:Q8L7W1
PaxDb:Q8L7W1 PRIDE:Q8L7W1 EnsemblPlants:AT1G58200.1
EnsemblPlants:AT1G58200.2 GeneID:842187 KEGG:ath:AT1G58200
TAIR:At1g58200 InParanoid:Q8L7W1 OMA:RFEEYLC PhylomeDB:Q8L7W1
Genevestigator:Q8L7W1 Uniprot:Q8L7W1
Length = 678
Score = 162 (62.1 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 50/169 (29%), Positives = 83/169 (49%)
Query: 348 EACGVAVQSILTVGGIGGVATAFASRDVLGNVLSGLSMQFSKPFSLGDTI--KAGSVE-- 403
E G + Q LT GG+G V A R++L N LS + + ++PF L + I K G E
Sbjct: 257 ELLGFSTQKWLTAGGLGTVLLTLAGREILTNFLSSIMIHATRPFVLNEWIQTKIGGYEVS 316
Query: 404 GQVVEMGLTTTTLLSAE-KFPVIVPNSMFSSQVIVNKS-RAPWRALVIRIPMQIDDLD-- 459
G V ++G + T++ + + V +PN FS ++ N + + WR I+ + I LD
Sbjct: 317 GTVEQVGWWSPTIIRGDDREAVHIPNHQFSVNIVRNLTQKTHWR---IKTHLAISHLDVS 373
Query: 460 KVPQISDDVKSMLRSNTKVFLGKEAPYCFLSQI--ESSFAELNVGCNLK 506
K+ I D++ +L N ++ K FL I E+ + + C +K
Sbjct: 374 KINNIVADMRKVLSKNPQIEQQKIHRRVFLEDIDPENQALRILISCFVK 422
>TIGR_CMR|CHY_0033 [details] [associations]
symbol:CHY_0033 "mechanosensitive ion channel family
protein" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0005216 "ion channel activity" evidence=ISS] [GO:0006811 "ion
transport" evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
InterPro:IPR006685 InterPro:IPR011014 InterPro:IPR011066
Pfam:PF00924 GO:GO:0016020 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0055085 InterPro:IPR010920 SUPFAM:SSF50182 GO:GO:0004146
SUPFAM:SSF82689 SUPFAM:SSF82861 eggNOG:COG0668 KO:K03442
RefSeq:YP_358905.1 ProteinModelPortal:Q3AG29 STRING:Q3AG29
GeneID:3728329 KEGG:chy:CHY_0033 PATRIC:21273263
HOGENOM:HOG000279189 OMA:QISIVRN BioCyc:CHYD246194:GJCN-33-MONOMER
Uniprot:Q3AG29
Length = 284
Score = 154 (59.3 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 41/136 (30%), Positives = 76/136 (55%)
Query: 339 FVIGLMALAEACGVAVQSILTVGGIGGVATAFASRDVLGNVLSGLSMQFSKPFSLGDTIK 398
F+ + + E G A +++LT GI G+A +F +++++ +V+SG + F++GD +
Sbjct: 76 FLTIIAQVFENTGFA-KTLLTGAGILGLAVSFGAQNLVKDVISGFFILMEDQFAVGDYVT 134
Query: 399 AGSVEGQVVEMGLTTTTLLSAEKFPVIVPNSMFSSQVIVNKSRAPWRALV-IRIPMQIDD 457
G G V E+GL T L I+PN S ++ NK+R P RALV + + + +D
Sbjct: 135 IGQTSGIVEELGLRVTKLRDFTGELHIIPNG--SITMVTNKTRGPQRALVDVGVAYE-ED 191
Query: 458 LDKVPQISDDVKSMLR 473
++KV ++ + V ++
Sbjct: 192 VEKVNRVLERVCQQIK 207
>UNIPROTKB|Q9KUN5 [details] [associations]
symbol:VC_0480 "Putative uncharacterized protein"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR006685 InterPro:IPR006686
InterPro:IPR011014 InterPro:IPR011066 Pfam:PF00924 PROSITE:PS01246
GO:GO:0016020 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0055085
InterPro:IPR010920 SUPFAM:SSF50182 GO:GO:0004146 SUPFAM:SSF82689
SUPFAM:SSF82861 KO:K03442 InterPro:IPR008910 Pfam:PF05552
HSSP:P11666 OMA:VEFIHGL PIR:A82318 RefSeq:NP_230134.1
ProteinModelPortal:Q9KUN5 DNASU:2615274 GeneID:2615274
KEGG:vch:VC0480 PATRIC:20080055 ProtClustDB:CLSK873991
Uniprot:Q9KUN5
Length = 287
Score = 154 (59.3 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 46/160 (28%), Positives = 75/160 (46%)
Query: 338 LFVIGLMALAEACGVAVQSILTVGGIGGVATAFASRDVLGNVLSGLSMQFSKPFSLGDTI 397
LF+I L+A GV S++ V G G+A A + L N +G+ + +PF GD +
Sbjct: 83 LFIIVLIAALSRIGVQTASVVAVIGAAGLAVGLALQGSLSNFAAGVLIVAFRPFKSGDYV 142
Query: 398 KAGSVEGQVVEMGLTTTTLLSAEKFPVIVPNSMFSSQVIVNKSRAPWRA--LVIRIPMQI 455
+ G V G V + + T L S + V+VPNS I N SR R +VI + +
Sbjct: 143 EIGGVAGSVDSIQIFQTVLKSPDNKMVVVPNSAVIGGAITNYSRHETRRVDMVIGVSYK- 201
Query: 456 DDLDKVPQISDDVKSMLRSNTKVFLGKEAPYCFLSQIESS 495
DL K ++ ++ L + ++ + L+ +SS
Sbjct: 202 SDLQKTKRV---LRETLEKDPRILKDPDMTIGVLTLADSS 238
>TIGR_CMR|VC_0480 [details] [associations]
symbol:VC_0480 "conserved hypothetical protein" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR006685
InterPro:IPR006686 InterPro:IPR011014 InterPro:IPR011066
Pfam:PF00924 PROSITE:PS01246 GO:GO:0016020 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0055085 InterPro:IPR010920
SUPFAM:SSF50182 GO:GO:0004146 SUPFAM:SSF82689 SUPFAM:SSF82861
KO:K03442 InterPro:IPR008910 Pfam:PF05552 HSSP:P11666 OMA:VEFIHGL
PIR:A82318 RefSeq:NP_230134.1 ProteinModelPortal:Q9KUN5
DNASU:2615274 GeneID:2615274 KEGG:vch:VC0480 PATRIC:20080055
ProtClustDB:CLSK873991 Uniprot:Q9KUN5
Length = 287
Score = 154 (59.3 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 46/160 (28%), Positives = 75/160 (46%)
Query: 338 LFVIGLMALAEACGVAVQSILTVGGIGGVATAFASRDVLGNVLSGLSMQFSKPFSLGDTI 397
LF+I L+A GV S++ V G G+A A + L N +G+ + +PF GD +
Sbjct: 83 LFIIVLIAALSRIGVQTASVVAVIGAAGLAVGLALQGSLSNFAAGVLIVAFRPFKSGDYV 142
Query: 398 KAGSVEGQVVEMGLTTTTLLSAEKFPVIVPNSMFSSQVIVNKSRAPWRA--LVIRIPMQI 455
+ G V G V + + T L S + V+VPNS I N SR R +VI + +
Sbjct: 143 EIGGVAGSVDSIQIFQTVLKSPDNKMVVVPNSAVIGGAITNYSRHETRRVDMVIGVSYK- 201
Query: 456 DDLDKVPQISDDVKSMLRSNTKVFLGKEAPYCFLSQIESS 495
DL K ++ ++ L + ++ + L+ +SS
Sbjct: 202 SDLQKTKRV---LRETLEKDPRILKDPDMTIGVLTLADSS 238
>TIGR_CMR|CPS_1419 [details] [associations]
symbol:CPS_1419 "mechanosensitive ion channel family
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0005216
"ion channel activity" evidence=ISS] [GO:0006811 "ion transport"
evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
InterPro:IPR006685 InterPro:IPR011014 InterPro:IPR011066
Pfam:PF00924 GO:GO:0016020 GO:GO:0055085 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR010920 SUPFAM:SSF50182
GO:GO:0004146 SUPFAM:SSF82689 SUPFAM:SSF82861 eggNOG:COG0668
HOGENOM:HOG000110051 RefSeq:YP_268162.1 ProteinModelPortal:Q485V3
GeneID:3523022 KEGG:cps:CPS_1419 PATRIC:21466053 OMA:ATHENCK
ProtClustDB:CLSK2768421 BioCyc:CPSY167879:GI48-1500-MONOMER
Uniprot:Q485V3
Length = 278
Score = 150 (57.9 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 61/244 (25%), Positives = 113/244 (46%)
Query: 255 ALEDPVRYLITF-MAFVQIGMMVAPTTIASQYLAQAWRGAVILSFVWFLHRWKTNVFTRA 313
A++ P+ L T M ++G++ AP + S +L +W + + +
Sbjct: 3 AIDAPMTQLETLTMKAYELGLIYAPRLVLSIL--------TLLIGLWII----SGITKLV 50
Query: 314 MASQSIAGLDREKMLALDRISSVGLFVIGLMALAEACGVAVQSILTVGGIGGVATAFASR 373
AS + +D + + + S L ++ +++A GVA S + V G G+A A +
Sbjct: 51 KASMVRSKVDPTLIPFMGSLVSWLLKLLLFISVASMIGVATTSFIAVLGAAGLAIGLALQ 110
Query: 374 DVLGNVLSGLSMQFSKPFSLGDTIKAGSVEGQVVEMGLTTTTLLSAEKFPVIVPNSMFSS 433
L N G+ + KP+ +GD I++ G V E+ + T LLS + +I+PN S+
Sbjct: 111 GSLANFAGGVLIMVFKPYKVGDLIESQGHLGVVKEVQIFNTILLSPQSKRIIIPNGATSN 170
Query: 434 QVIVNKS-RAPWRA-LVIRIPMQIDDLDKVPQISDDVKSMLRSNTKVFLGKEAPYCFLSQ 491
++N + R L I + + D+D+ + DV L +N KV + AP+ +S+
Sbjct: 171 GSVINYTVEGKIRVDLTIGVSY-LADIDQTKAVLMDV---LLNNDKV-MKTPAPFVGVSE 225
Query: 492 IESS 495
+ S
Sbjct: 226 MADS 229
>TAIR|locus:2142414 [details] [associations]
symbol:MSL2 "MSCS-like 2" species:3702 "Arabidopsis
thaliana" [GO:0005886 "plasma membrane" evidence=ISM] [GO:0016020
"membrane" evidence=IEA;ISS] [GO:0055085 "transmembrane transport"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IGI]
[GO:0009526 "plastid envelope" evidence=IDA] [GO:0009657 "plastid
organization" evidence=IGI] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0010020 "chloroplast fission" evidence=IGI] InterPro:IPR006685
Pfam:PF00924 GO:GO:0016021 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009507 GO:GO:0031969 EMBL:AL353995 GO:GO:0005216
GO:GO:0010020 InterPro:IPR010920 SUPFAM:SSF50182 GO:GO:0004146
eggNOG:COG0668 EMBL:AK221831 EMBL:AK230015 EMBL:AK317509
IPI:IPI00533775 IPI:IPI00846450 IPI:IPI00991346 PIR:T49990
RefSeq:NP_001078567.1 RefSeq:NP_001190278.1 RefSeq:NP_568230.2
UniGene:At.48016 ProteinModelPortal:Q56X46 TCDB:1.A.23.7.1
PRIDE:Q56X46 EnsemblPlants:AT5G10490.1 GeneID:830913
KEGG:ath:AT5G10490 TAIR:At5g10490 HOGENOM:HOG000083399
InParanoid:Q56X46 OMA:YKINGED PhylomeDB:Q56X46
ProtClustDB:CLSN2680522 Genevestigator:Q56X46 GO:GO:0009526
Uniprot:Q56X46
Length = 673
Score = 154 (59.3 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 50/179 (27%), Positives = 84/179 (46%)
Query: 338 LFVIGLMALAEACGVAVQSILTVGGIGGVATAFASRDVLGNVLSGLSMQFSKPFSLGDTI 397
++V + E G + Q LT GG+G V A R++L N LS + + ++PF L + I
Sbjct: 245 VWVAAVSLFMELLGFSTQKWLTAGGLGTVLITLAGREILTNFLSSVMIHATRPFVLNEWI 304
Query: 398 KA---G-SVEGQVVEMGLTTTTLLSAEKFPVI-VPNSMFSSQVIVNKS-RAPWRALVIRI 451
+ G V G V +G + T++ E I +PN F+ V+ N + + WR I+
Sbjct: 305 QTKIEGYEVSGTVEHVGWWSPTIIRGEDREAIHIPNHKFTVNVVRNLTQKTHWR---IKT 361
Query: 452 PMQIDDLD--KVPQISDDVKSMLRSNTKVFLGKEAPYCFLSQI--ESSFAELNVGCNLK 506
+ I LD K+ I D++ +L N V + FL + E+ + + C +K
Sbjct: 362 HLAISHLDVNKINNIVADMRKVLAKNPMVEQQRLHRRVFLENVIPENQALSILISCFVK 420
>UNIPROTKB|Q8EC05 [details] [associations]
symbol:mscS "Small conductance mechanosensitive ion channel
protein MscS" species:211586 "Shewanella oneidensis MR-1"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR006685 InterPro:IPR011014
InterPro:IPR011066 Pfam:PF00924 GO:GO:0016020 GO:GO:0055085
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR010920
SUPFAM:SSF50182 GO:GO:0004146 SUPFAM:SSF82689 SUPFAM:SSF82861
HOGENOM:HOG000110050 KO:K03442 InterPro:IPR008910 Pfam:PF05552
RefSeq:NP_718894.1 HSSP:P11666 ProteinModelPortal:Q8EC05
GeneID:1171022 KEGG:son:SO_3340 PATRIC:23526354 OMA:VEFIHGL
ProtClustDB:CLSK907114 Uniprot:Q8EC05
Length = 275
Score = 144 (55.7 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 46/160 (28%), Positives = 78/160 (48%)
Query: 338 LFVIGLMALAEACGVAVQSILTVGGIGGVATAFASRDVLGNVLSGLSMQFSKPFSLGDTI 397
+FV ++A GV S++ V G G+A A + L N SG+ M +P +GD I
Sbjct: 68 VFVFTIIATLGQIGVQTASLVAVIGAAGLAVGLALQGSLSNFASGVLMVLFRPCRVGDYI 127
Query: 398 KAGSVEGQVVEMGLTTTTLLSAEKFPVIVPNSMFSSQVIVNKSRAPWRALVIRIPMQID- 456
+A + G V E+ + +T L + + ++ PNS + I N S + R + + I +
Sbjct: 128 EAAGIAGTVDEITIFSTKLRTPDNKVIVAPNSSIMNGTITNYSASENRRIDLVICVSYSA 187
Query: 457 DLDKVPQISDDVKSMLRSNTKVFLGKEAPYCF-LSQIESS 495
DL + ++ ++ L +N V KE Y LS++ SS
Sbjct: 188 DLAQTKKVLTEI---LDNNQYVL--KEPGYTVGLSELASS 222
>TIGR_CMR|SO_3340 [details] [associations]
symbol:SO_3340 "conserved hypothetical protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR006685 InterPro:IPR011014 InterPro:IPR011066
Pfam:PF00924 GO:GO:0016020 GO:GO:0055085 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR010920 SUPFAM:SSF50182
GO:GO:0004146 SUPFAM:SSF82689 SUPFAM:SSF82861 HOGENOM:HOG000110050
KO:K03442 InterPro:IPR008910 Pfam:PF05552 RefSeq:NP_718894.1
HSSP:P11666 ProteinModelPortal:Q8EC05 GeneID:1171022
KEGG:son:SO_3340 PATRIC:23526354 OMA:VEFIHGL ProtClustDB:CLSK907114
Uniprot:Q8EC05
Length = 275
Score = 144 (55.7 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 46/160 (28%), Positives = 78/160 (48%)
Query: 338 LFVIGLMALAEACGVAVQSILTVGGIGGVATAFASRDVLGNVLSGLSMQFSKPFSLGDTI 397
+FV ++A GV S++ V G G+A A + L N SG+ M +P +GD I
Sbjct: 68 VFVFTIIATLGQIGVQTASLVAVIGAAGLAVGLALQGSLSNFASGVLMVLFRPCRVGDYI 127
Query: 398 KAGSVEGQVVEMGLTTTTLLSAEKFPVIVPNSMFSSQVIVNKSRAPWRALVIRIPMQID- 456
+A + G V E+ + +T L + + ++ PNS + I N S + R + + I +
Sbjct: 128 EAAGIAGTVDEITIFSTKLRTPDNKVIVAPNSSIMNGTITNYSASENRRIDLVICVSYSA 187
Query: 457 DLDKVPQISDDVKSMLRSNTKVFLGKEAPYCF-LSQIESS 495
DL + ++ ++ L +N V KE Y LS++ SS
Sbjct: 188 DLAQTKKVLTEI---LDNNQYVL--KEPGYTVGLSELASS 222
>TIGR_CMR|SPO_3496 [details] [associations]
symbol:SPO_3496 "mechanosensitive ion channel family
protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0005216 "ion
channel activity" evidence=ISS] [GO:0006811 "ion transport"
evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
InterPro:IPR006685 InterPro:IPR011014 InterPro:IPR011066
Pfam:PF00924 GO:GO:0016020 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0055085 InterPro:IPR010920 SUPFAM:SSF50182 GO:GO:0004146
SUPFAM:SSF82689 SUPFAM:SSF82861 KO:K03442 HOGENOM:HOG000110051
RefSeq:YP_168692.1 ProteinModelPortal:Q5LMR6 GeneID:3193548
KEGG:sil:SPO3496 PATRIC:23380457 OMA:INEASTW ProtClustDB:CLSK934188
Uniprot:Q5LMR6
Length = 268
Score = 142 (55.0 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 52/195 (26%), Positives = 90/195 (46%)
Query: 318 SIAGLDREKMLALDRIS-SVGLFVIGLM----------ALAEACGVAVQSILTVGGIGGV 366
+IAGL R ++ A +I ++G F L+ A+ G+ SI+ V G +
Sbjct: 34 TIAGLVRRRINATPQIDPTLGNFTASLVKWAILAMVLVAVLGIFGIEATSIVAVLGAASL 93
Query: 367 ATAFASRDVLGNVLSGLSMQFSKPFSLGDTIKAGSVEGQVVEMGLTTTTLLSAEKFPVIV 426
A A + L ++ +G+ + +P+ LG + G G V ++ L TT L++ + +IV
Sbjct: 94 AIGLALQGTLSDLAAGVMLVVFRPYKLGQFVDIGGTSGTVRDLNLFTTELVTPDNVQIIV 153
Query: 427 PNSMFSSQVIVNKSRAPWRA--LVIRIPMQIDDLDKVPQISDDVKSMLRSNTKVFLGKEA 484
PN +I N S R LV I DD K +I + S ++++V L A
Sbjct: 154 PNGQAWGAIITNYSAHDTRRVDLVFGIDYD-DDAGKAMEIIERTAS---ADSRV-LADPA 208
Query: 485 PYCFLSQIESSFAEL 499
P+ ++ + S +L
Sbjct: 209 PWVRVTNLGDSSVDL 223
>TIGR_CMR|SPO_3437 [details] [associations]
symbol:SPO_3437 "transporter, small conductance
mechanosensitive ion channel (MscS) family" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0005216 "ion channel activity"
evidence=ISS] [GO:0006811 "ion transport" evidence=ISS] [GO:0016020
"membrane" evidence=ISS] InterPro:IPR006685 InterPro:IPR011014
InterPro:IPR011066 Pfam:PF00924 GO:GO:0016020 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0055085 InterPro:IPR010920
SUPFAM:SSF50182 GO:GO:0004146 SUPFAM:SSF82689 SUPFAM:SSF82861
RefSeq:YP_168633.1 ProteinModelPortal:Q5LMX5 GeneID:3193967
KEGG:sil:SPO3437 PATRIC:23380335 HOGENOM:HOG000251924 OMA:GSANRYE
ProtClustDB:CLSK759282 Uniprot:Q5LMX5
Length = 453
Score = 145 (56.1 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 47/205 (22%), Positives = 91/205 (44%)
Query: 268 AFVQIGMMVAPTTIASQYLAQAWRGAVILSFVWFLHRWKTNVFTRAMASQSIAGLDREKM 327
A ++ V P S L A R V+ +++L RW + + Q ++
Sbjct: 171 AMAKLDQTVVPLGNLSFSLLFALRFLVVGGAIFWLGRWSNDQSVNFIKQQREMRPAMREL 230
Query: 328 LALDRISSVGLFVIGLMALAEACGVAVQSILTVGGIGGVATAFASRDVLGNVLSGLSMQF 387
A + +G+F I + + G+++ S+ +GG+ GV F + + N +SG+ +
Sbjct: 231 TA--KAVEIGIFGIAFLLVMNIMGISLTSLAVLGGVIGVGLGFGLQKIASNFISGVILLL 288
Query: 388 SKPFSLGDTIKA-GSVEGQVVEMGLTTTTLLSAEKFPVIVPNSMFSSQVIVNKSRAPWRA 446
++GD ++ G G +++M T L + + ++VPN F + +VN S A
Sbjct: 289 EGQATVGDYVELDGGEAGTIIKMTARATILETFDGRWIVVPNEDFITTRVVNFSDQG-SA 347
Query: 447 LVIRIPMQID---DLDKVPQISDDV 468
P + D+++VP I + V
Sbjct: 348 NRYEAPFSVSYDTDINRVPAIIEAV 372
>TIGR_CMR|CPS_4603 [details] [associations]
symbol:CPS_4603 "transporter, small conductance
mechanosensitive ion channel (MscS) family" species:167879
"Colwellia psychrerythraea 34H" [GO:0005216 "ion channel activity"
evidence=ISS] [GO:0006811 "ion transport" evidence=ISS] [GO:0016020
"membrane" evidence=ISS] InterPro:IPR006685 InterPro:IPR006686
InterPro:IPR011014 InterPro:IPR011066 Pfam:PF00924 PROSITE:PS01246
GO:GO:0016020 GO:GO:0055085 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR010920 SUPFAM:SSF50182 GO:GO:0004146 SUPFAM:SSF82689
SUPFAM:SSF82861 eggNOG:COG0668 RefSeq:YP_271250.1
ProteinModelPortal:Q47VC2 STRING:Q47VC2 GeneID:3518978
KEGG:cps:CPS_4603 PATRIC:21472029 HOGENOM:HOG000110051 OMA:TFDNRRI
ProtClustDB:CLSK759567 BioCyc:CPSY167879:GI48-4612-MONOMER
Uniprot:Q47VC2
Length = 275
Score = 135 (52.6 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 36/123 (29%), Positives = 61/123 (49%)
Query: 321 GLDREKM-LALDR----ISSVGLFVIGLMALAEACGVAVQSILTVGGIGGVATAFASRDV 375
GL+++K+ + L + I S L I ++ LA G+ S + + G G+A A +
Sbjct: 50 GLEKKKVEITLHQFLLSILSTLLKAIQIIILASMLGIQTASFIAILGAAGLAIGLALQGS 109
Query: 376 LGNVLSGLSMQFSKPFSLGDTIKAGSVEGQVVEMGLTTTTLLSAEKFPVIVPNSMFSSQV 435
L N G+ + +PF GD IKA G V E+ + T L + + +I+PN + S+
Sbjct: 110 LANFAGGVLILLFRPFKNGDAIKAQGYVGSVEEIQIFNTILKTFDNQRIIIPNGLLSNGC 169
Query: 436 IVN 438
+ N
Sbjct: 170 VTN 172
>TIGR_CMR|CPS_1746 [details] [associations]
symbol:CPS_1746 "mechanosensitive ion channel family
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0005216
"ion channel activity" evidence=ISS] [GO:0006810 "transport"
evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
InterPro:IPR006685 InterPro:IPR011014 InterPro:IPR011066
Pfam:PF00924 GO:GO:0016020 GO:GO:0055085 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR010920 SUPFAM:SSF50182
GO:GO:0004146 SUPFAM:SSF82689 SUPFAM:SSF82861 eggNOG:COG0668
RefSeq:YP_268477.1 ProteinModelPortal:Q484N8 GeneID:3522319
KEGG:cps:CPS_1746 PATRIC:21466659 HOGENOM:HOG000287006 OMA:NITEVER
ProtClustDB:CLSK274288 BioCyc:CPSY167879:GI48-1816-MONOMER
Uniprot:Q484N8
Length = 531
Score = 140 (54.3 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 56/223 (25%), Positives = 100/223 (44%)
Query: 284 QYLAQAWRGAVILSFVWFLHRWKTNVFTRAMASQS-IAGLDREKMLALDRISSVGLFVIG 342
++LA + + L F++ L R + A+ S ++ L K+ + V + +IG
Sbjct: 270 RWLANIIKFTLALFFIYILSRTAGKITDAALNRNSNLSTL--LKLFIKVSVRRV-ILIIG 326
Query: 343 LMALAEACGVAVQSILTVGGIGGVATAFASRDVLGNVLSGLSMQFSKPFSLGDTIKAGSV 402
+ + V +L + G G+ A + L N SG+ + +PF +GD I+ V
Sbjct: 327 FIVSLTLIEINVAPVLALIGAAGLVVGLALQGTLSNFASGMLILIYRPFDVGDIIEIDGV 386
Query: 403 EGQVVEMGLTTTTLLSAEKFPVIVPNSMFSSQVIVNKSRAPWRA--LVIRIPMQIDDLDK 460
G V M L +T++ + + ++VPN+ IVN + + R LV I DD+ K
Sbjct: 387 TGTVHSMTLLSTSIKTFDNQHLVVPNNNIWGTTIVNVTGSRTRRVDLVFGIGYG-DDMVK 445
Query: 461 VPQISDDVKSMLRSNTKVFLGKEAPYCFLSQIESSFAELNVGC 503
+I DV S ++ L AP ++++ S +N C
Sbjct: 446 AEKIMLDVVS----RHELILENPAPVVKVNELADS--SVNFVC 482
>TIGR_CMR|CPS_1934 [details] [associations]
symbol:CPS_1934 "mechanosensitive ion channel family
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0005216
"ion channel activity" evidence=ISS] [GO:0006811 "ion transport"
evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
InterPro:IPR006685 InterPro:IPR006686 InterPro:IPR011014
InterPro:IPR011066 Pfam:PF00924 PROSITE:PS01246 GO:GO:0016020
GO:GO:0055085 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR010920 SUPFAM:SSF50182 GO:GO:0004146 eggNOG:COG3264
SUPFAM:SSF82689 SUPFAM:SSF82861 RefSeq:YP_268664.1
ProteinModelPortal:Q483V2 STRING:Q483V2 GeneID:3521805
KEGG:cps:CPS_1934 PATRIC:21467005 HOGENOM:HOG000224337 OMA:FGFGAQN
ProtClustDB:CLSK642971 BioCyc:CPSY167879:GI48-2004-MONOMER
Uniprot:Q483V2
Length = 287
Score = 132 (51.5 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 33/176 (18%), Positives = 78/176 (44%)
Query: 263 LITFMAFVQIGMMVAPTTIASQYLAQAWRGAVILSFVWFLHRWKTNVFTRAMASQSIAGL 322
L++F+ + P TI L + +I+ F FL +W + T + +++
Sbjct: 6 LVSFLNISIASIAEQPITIGDILLVPTF---LIIGF--FLTKWSVKIITHRLTTKNT--- 57
Query: 323 DREKMLALDRISSVGLFVIGLMALAEACGVAVQSILTVGGIGGVATAFASRDVLGNVLSG 382
D + L R+ V I ++ + V + + + G + F +++++ N +SG
Sbjct: 58 DPNIIHLLQRVFYVVAITIIVITTLDVINVPITAFAFLSGAIAIGFGFGAQNIINNFISG 117
Query: 383 LSMQFSKPFSLGDTIKAGSVEGQVVEMGLTTTTLLSAEKFPVIVPNSMFSSQVIVN 438
+ + +P +GD ++ +G V ++ +T + + +++PNS ++N
Sbjct: 118 WILMWERPIRIGDFLEVEDAKGIVEQINTRSTRIKRVDGVHLLIPNSKLIENTVIN 173
>UNIPROTKB|P39285 [details] [associations]
symbol:mscM "mechanosensitive channel of miniconductance
McsM monomer" species:83333 "Escherichia coli K-12" [GO:0055085
"transmembrane transport" evidence=IEA] [GO:0071470 "cellular
response to osmotic stress" evidence=IGI] [GO:0022833 "mechanically
gated channel activity" evidence=IGI] [GO:0005887 "integral to
plasma membrane" evidence=RCA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR006685
InterPro:IPR006686 InterPro:IPR011014 InterPro:IPR011066
Pfam:PF00924 PROSITE:PS01246 GO:GO:0016021 GO:GO:0005886
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0055085 EMBL:U14003
InterPro:IPR010920 SUPFAM:SSF50182 GO:GO:0004146 eggNOG:COG3264
KO:K05802 InterPro:IPR025692 Pfam:PF12794 SUPFAM:SSF82689
SUPFAM:SSF82861 EMBL:J03916 PIR:E65226 RefSeq:NP_418583.1
RefSeq:YP_492304.1 ProteinModelPortal:P39285 IntAct:P39285
PRIDE:P39285 EnsemblBacteria:EBESCT00000001911
EnsemblBacteria:EBESCT00000015165 GeneID:12933035 GeneID:948676
KEGG:ecj:Y75_p4048 KEGG:eco:b4159 PATRIC:32123891 EchoBASE:EB2371
EcoGene:EG12478 HOGENOM:HOG000281473 OMA:LLVIYHI
ProtClustDB:PRK10929 BioCyc:EcoCyc:G7840-MONOMER
BioCyc:ECOL316407:JW4120-MONOMER Genevestigator:P39285
Uniprot:P39285
Length = 1107
Score = 139 (54.0 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 40/166 (24%), Positives = 78/166 (46%)
Query: 329 ALDRISSVGLFVIGLMALAEACGVAVQSILTVGGIGGVATAFASRDVLGNVLSGLSMQFS 388
A+ I+ L +IG + G+ + + GV F +++ N +SGL + F
Sbjct: 872 AITTITKYLLMLIGGLVGFSMIGIEWSKLQWLVAALGVGLGFGLQEIFANFISGLIILFE 931
Query: 389 KPFSLGDTIKAGSVEGQVVEMGLTTTTLLSAEKFPVIVPNSMFSSQVIVNKSRAPW-RAL 447
KP +GDT+ + G V ++ TT+ ++ +IVPN F ++ +N S + +
Sbjct: 932 KPIRIGDTVTIRDLTGSVTKINTRATTISDWDRKEIIVPNKAFITEQFINWSLSDSVTRV 991
Query: 448 VIRIPMQIDDLDKVPQISDDVKSMLRSNTKVFLGKEAPYCFLSQIE 493
V+ IP D + ++++ + + R + V + AP FL ++
Sbjct: 992 VLTIPAPADANSE--EVTEILLTAARRCSLV-IDNPAPEVFLVDLQ 1034
>TIGR_CMR|GSU_1557 [details] [associations]
symbol:GSU_1557 "mechanosensitive ion channel family
protein" species:243231 "Geobacter sulfurreducens PCA" [GO:0005216
"ion channel activity" evidence=ISS] [GO:0006810 "transport"
evidence=ISS] InterPro:IPR006685 InterPro:IPR011014
InterPro:IPR011066 Pfam:PF00924 GO:GO:0016020 GO:GO:0055085
EMBL:AE017180 GenomeReviews:AE017180_GR InterPro:IPR010920
SUPFAM:SSF50182 GO:GO:0004146 SUPFAM:SSF82689 SUPFAM:SSF82861
KO:K03442 HOGENOM:HOG000110051 RefSeq:NP_952608.1
ProteinModelPortal:Q74CW4 GeneID:2687143 KEGG:gsu:GSU1557
PATRIC:22025963 OMA:YFGIQTT ProtClustDB:CLSK2502522
BioCyc:GSUL243231:GH27-1553-MONOMER Uniprot:Q74CW4
Length = 274
Score = 129 (50.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 41/164 (25%), Positives = 77/164 (46%)
Query: 292 GAVILSFV--WFLHRWKTNVFTRAMASQSIAG--LDREKMLALDRISSVGLFVIGLMALA 347
G I++ + W + RW ++ R M Q + +D M L V L ++ ++A+
Sbjct: 19 GTKIIAAILFWVVGRWLIHLVQR-MLHQVLEKQKVDPSLMRYLGNFLGVALNIVLVVAIL 77
Query: 348 EACGVAVQSILT-VGGIGGVATAFASRDVLGNVLSGLSMQFSKPFSLGDTIKAGSVEGQV 406
GV + V G+G +A A +L N+ +G + +PF +GD + AG + G V
Sbjct: 78 GYFGVQTTTFAALVAGVG-IAIGAAWGGLLSNLAAGAFLLVLRPFKVGDFVTAGGITGTV 136
Query: 407 VEMGLTTTTLLSAEKFPVIVPNSMFSSQVIVNKSRAPWRALVIR 450
E+GL T + + + +V N+ + I N + +R + ++
Sbjct: 137 NEIGLFVTAINTPDNVMTMVGNAKIFNDTIQNFTINDYRRVELK 180
>TIGR_CMR|BA_5726 [details] [associations]
symbol:BA_5726 "mechanosensitive ion channel family
protein" species:198094 "Bacillus anthracis str. Ames" [GO:0005216
"ion channel activity" evidence=ISS] [GO:0006810 "transport"
evidence=ISS] InterPro:IPR006685 InterPro:IPR011014
InterPro:IPR011066 Pfam:PF00924 GO:GO:0016020 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0055085
InterPro:IPR010920 SUPFAM:SSF50182 GO:GO:0004146 SUPFAM:SSF82689
SUPFAM:SSF82861 KO:K03442 HOGENOM:HOG000279189 RefSeq:NP_847872.1
RefSeq:YP_022412.1 RefSeq:YP_031567.1 ProteinModelPortal:Q81JH9
DNASU:1085495 EnsemblBacteria:EBBACT00000008766
EnsemblBacteria:EBBACT00000017596 EnsemblBacteria:EBBACT00000020439
GeneID:1085495 GeneID:2815985 GeneID:2851040 KEGG:ban:BA_5726
KEGG:bar:GBAA_5726 KEGG:bat:BAS5330 OMA:WAHIGVA
ProtClustDB:CLSK904822 BioCyc:BANT260799:GJAJ-5407-MONOMER
BioCyc:BANT261594:GJ7F-5583-MONOMER Uniprot:Q81JH9
Length = 293
Score = 129 (50.5 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 38/137 (27%), Positives = 72/137 (52%)
Query: 333 ISSVGLFVIGLMALAEACGVAVQSILTVGGIGGVATAFASRDVLGNVLSGLSMQFSKPFS 392
++ V +F++ L+A+ + +L G+ G+A F ++ ++ +V++GL + FS
Sbjct: 79 VAYVVMFIM-LIAILGVFNINASGLLAGAGVIGLAVGFGAQSLVKDVITGLFILLEDQFS 137
Query: 393 LGDTIKAGSVEGQVVEMGLTTTTLLSAEKFPVIVPNSMFSSQVIVNKSRAPWRALV-IRI 451
+GD +K G EG V+E+GL TT + S +PN S + N S + A V + I
Sbjct: 138 VGDYVKIGQFEGVVLEIGLRTTKVKSWTGEIHTLPNG--SIVQVTNYSVSNSVAFVDVSI 195
Query: 452 PMQIDDLDKVPQISDDV 468
+ D + K Q+ +++
Sbjct: 196 SYEAD-IAKAEQVIEEL 211
>UNIPROTKB|Q721F3 [details] [associations]
symbol:LMOf2365_1034 "Mechanosensitive ion channel family
protein" species:265669 "Listeria monocytogenes serotype 4b str.
F2365" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR006685
InterPro:IPR011014 InterPro:IPR011066 Pfam:PF00924 GO:GO:0016020
GO:GO:0055085 EMBL:AE017262 GenomeReviews:AE017262_GR
InterPro:IPR010920 SUPFAM:SSF50182 GO:GO:0004146 SUPFAM:SSF82689
SUPFAM:SSF82861 eggNOG:COG0668 KO:K03442 HOGENOM:HOG000279189
RefSeq:YP_013634.1 ProteinModelPortal:Q721F3 STRING:Q721F3
GeneID:2799065 KEGG:lmf:LMOf2365_1034 PATRIC:20323297 OMA:YSAMIIA
ProtClustDB:CLSK564216 Uniprot:Q721F3
Length = 281
Score = 127 (49.8 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 42/167 (25%), Positives = 74/167 (44%)
Query: 312 RAMASQSIAGLDREKMLALDRISSVGLFVIGLMALAEACGVAVQSILTVGGIGGVATAFA 371
R + S+ D + L + V F ++ L V +I+ G+ +A AF
Sbjct: 53 RQQQAVSVGRADTLESLISNFYGYVLFFTFAILLLQNFMDVT--AIIASAGVASLAIAFG 110
Query: 372 SRDVLGNVLSGLSMQFSKPFSLGDTIKAGSVEGQVVEMGLTTTTLLSAEKFPVIVPNSMF 431
++ ++ +V++G + + +GDTI G V G V +GL TT + + +PN
Sbjct: 111 AQGLVSDVVTGFFILLERQLDVGDTITIGLVNGTVEALGLRTTQVRDFDGTLHFIPNRQI 170
Query: 432 SSQVIVNKSRAPWRALV-IRIPMQIDDLDKVPQISDDVKSMLRSNTK 477
V+ N SR R +V I+I +D +K +I +V + K
Sbjct: 171 --MVVSNHSRGNMRVMVDIQISPH-EDPEKAIKIIGEVCDVAAKENK 214
>TIGR_CMR|CPS_0104 [details] [associations]
symbol:CPS_0104 "mechanosensitive ion channel family
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0005216
"ion channel activity" evidence=ISS] [GO:0006811 "ion transport"
evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
InterPro:IPR006685 InterPro:IPR006686 InterPro:IPR011014
InterPro:IPR011066 Pfam:PF00924 PROSITE:PS01246 GO:GO:0016020
GO:GO:0055085 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR010920 SUPFAM:SSF50182 GO:GO:0004146 SUPFAM:SSF82689
SUPFAM:SSF82861 eggNOG:COG0668 HOGENOM:HOG000110051
RefSeq:YP_266872.1 ProteinModelPortal:Q48AP1 STRING:Q48AP1
GeneID:3519542 KEGG:cps:CPS_0104 PATRIC:21463623 OMA:HNSFANK
ProtClustDB:CLSK938063 BioCyc:CPSY167879:GI48-207-MONOMER
Uniprot:Q48AP1
Length = 309
Score = 127 (49.8 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 32/126 (25%), Positives = 63/126 (50%)
Query: 336 VGLFVIGLMALAEACGVAVQSILTVGGIGGVATAFASRDVLGNVLSGLSMQFSKPFSLGD 395
V + +I +MAL++ G++V + G + A + +L N +G ++ +PF +GD
Sbjct: 101 VVMVMISIMALSKI-GISVTPFIAALGAISLGAGLALQGLLANYAAGFNIIIIRPFVVGD 159
Query: 396 TIKAGSVEGQVVEMGLTTTTLLSAEKFPVIVPNSMFSSQVIVNKSRAPWRALVIRIPMQI 455
TI+ V G V E+ L T + + + + +PN +V++N + L + I Q
Sbjct: 160 TIEVQGVTGIVKEVQLAYTIIQNEDSAEITIPNKHIVGEVVLNSRKDTLLKLSVGISYQD 219
Query: 456 DDLDKV 461
+ ++ V
Sbjct: 220 NPIEIV 225
Score = 41 (19.5 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 28/124 (22%), Positives = 53/124 (42%)
Query: 159 DKIKDAWKSVVDGVSYTGQKAKD---EL-SPQIEQLLDAHPYLRDVIVPVSCYLTGTVLA 214
D D +++ + ++ T Q+A D EL +IEQ + + D S L G +L
Sbjct: 3 DPKTDKTETLTNTITDTAQQAVDLPAELLRHEIEQASAIYKIVIDFFTNYSFQLIGALLI 62
Query: 215 WVVMPRVLRRFHKYAIQGPVSLLSGGLSIEQVPYEKSFWGALEDPVRYLITFMAFVQIGM 274
+++ V + K ++ L ++ V + + V +I+ MA +IG+
Sbjct: 63 FLLGFYVAGKIAKTVLR-----LCEKHKLD-VTLSRFIASTTKMVVMVMISIMALSKIGI 116
Query: 275 MVAP 278
V P
Sbjct: 117 SVTP 120
>UNIPROTKB|Q883Q3 [details] [associations]
symbol:PSPTO_2297 "Membrane protein, putative"
species:223283 "Pseudomonas syringae pv. tomato str. DC3000"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR006685 Pfam:PF00924
GO:GO:0016020 GO:GO:0055085 EMBL:AE016853 GenomeReviews:AE016853_GR
InterPro:IPR010920 SUPFAM:SSF50182 GO:GO:0004146 eggNOG:COG0668
InterPro:IPR008910 Pfam:PF05552 OMA:QIEEIGT ProtClustDB:CLSK866774
RefSeq:NP_792116.1 ProteinModelPortal:Q883Q3 GeneID:1183948
KEGG:pst:PSPTO_2297 PATRIC:19995891 HOGENOM:HOG000247175
BioCyc:PSYR223283:GJIX-2342-MONOMER Uniprot:Q883Q3
Length = 274
Score = 124 (48.7 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 48/186 (25%), Positives = 86/186 (46%)
Query: 263 LITFM--AFVQIGMMVAPTTI--ASQYLAQAWRGAVILSFVWFLHRWKTNVFTRAMAS-- 316
L+ F+ A +G+ T+ + YL + + GA ++ V L N R A
Sbjct: 93 LLIFLVSAAESLGLQRVSATLDMLALYLPKVF-GAALVLLVGVLLAQLVNGLVRGAAEGV 151
Query: 317 --QSIAGLDREKMLALDRISSVGLFVIGLMALAEACG-VAVQSILTVGGIGGVATAFASR 373
AGL R L I S+ + + L + V V +++TVG +A SR
Sbjct: 152 GIDYSAGLGRIAQ-GLVIIISISVAISQLEVKTDLLNHVIVIALITVGLTVALALGLGSR 210
Query: 374 DVLGNVLSGLSMQFSKPFSLGDTIKAGSVEGQVVEMGLTTTTLLSAEKFPVIVPNSMFSS 433
++ G +++G+ ++ + F +G ++ G EGQ+ E+G TTLL+ E V N +
Sbjct: 211 EIAGQIIAGIYVR--ELFQVGQQVQVGDTEGQIEEIGTVKTTLLTDEGELVSFSNRILLE 268
Query: 434 QVIVNK 439
Q ++++
Sbjct: 269 QRVISR 274
>TIGR_CMR|CPS_0969 [details] [associations]
symbol:CPS_0969 "transporter, small conductance
mechanosensitive ion channel (MscS) family" species:167879
"Colwellia psychrerythraea 34H" [GO:0005216 "ion channel activity"
evidence=ISS] [GO:0006811 "ion transport" evidence=ISS] [GO:0016020
"membrane" evidence=ISS] InterPro:IPR006685 InterPro:IPR011014
Pfam:PF00924 GO:GO:0016020 GO:GO:0055085 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR010920 SUPFAM:SSF50182
GO:GO:0004146 SUPFAM:SSF82861 eggNOG:COG0668 KO:K16052
RefSeq:YP_267718.1 ProteinModelPortal:Q487P7 STRING:Q487P7
GeneID:3522909 KEGG:cps:CPS_0969 PATRIC:21465215
HOGENOM:HOG000223481 OMA:AQKTIEH ProtClustDB:CLSK910281
BioCyc:CPSY167879:GI48-1055-MONOMER Uniprot:Q487P7
Length = 554
Score = 134 (52.2 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 53/226 (23%), Positives = 106/226 (46%)
Query: 256 LEDPVRYLITFMAFVQIGMMVAPTTIASQYLAQAWRGAVILSFVWFLHRWKTNVFTRAMA 315
+++P LI + F + A TIA + + + +I+++ W R+ ++ +A
Sbjct: 267 IKEPFALLIAVI-FARNFHDEANVTIALRAVTEG-STLLIIAWCWVTFRF-IDLMKVLLA 323
Query: 316 SQSIAGLDREKMLALDRISSVG----LFVIGLMAL--AEACGVAVQSILTVGGIGGVATA 369
+ IA ++K LA+ + G + + + AL E G ++L GIGG+A A
Sbjct: 324 EKFIA---QDKPLAVYLLRPAGTVIKIMIFSIAALNWLENLGFNASTLLAGLGIGGLAIA 380
Query: 370 FASRDVLGNVLSGLSMQFSKPFSLGDTIKAGSVEGQVVEMGLTTTTLLSAEKFPVIVPNS 429
A++ + N++ +++ S P +G+ + G+ G V E+GL T + + ++ + V N+
Sbjct: 381 LAAQKTVENIIGAITLYTSAPIRIGNFCRFGNSLGVVEEIGLRATRIRTIDRSVIYVANA 440
Query: 430 MFSSQVIVNKSRAPWRALVIRIPMQIDD-LDKVPQISDDVKSMLRS 474
F I N S A +I + D + + + ++ ML S
Sbjct: 441 KFIDMNIENYSEREKMAFKPKIFLAPDTPKENIDALLVAIRGMLSS 486
Score = 39 (18.8 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 196 YLRDVIVPVSCYLTGTVLAWVVMPRVLRRFHK 227
+L +++ V Y +L WVV + R + K
Sbjct: 227 WLYFILMLVLYYFIAKILTWVVAFAIKRVYKK 258
>TIGR_CMR|SPO_1922 [details] [associations]
symbol:SPO_1922 "transporter, small conductance
mechanosensitive ion channel (MscS) family" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0005216 "ion channel activity"
evidence=ISS] [GO:0006811 "ion transport" evidence=ISS] [GO:0016020
"membrane" evidence=ISS] InterPro:IPR006685 InterPro:IPR011014
InterPro:IPR011066 Pfam:PF00924 GO:GO:0016020 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0055085 InterPro:IPR010920
SUPFAM:SSF50182 GO:GO:0004146 SUPFAM:SSF82689 SUPFAM:SSF82861
RefSeq:YP_167157.1 ProteinModelPortal:Q5LS48 GeneID:3193175
KEGG:sil:SPO1922 PATRIC:23377173 HOGENOM:HOG000145709 OMA:TDVIVPN
ProtClustDB:CLSK835986 InterPro:IPR022249 Pfam:PF12607
Uniprot:Q5LS48
Length = 810
Score = 137 (53.3 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 57/237 (24%), Positives = 103/237 (43%)
Query: 236 LLSGGLSIEQVPYEKSFWGALEDPVRYLITFMAFVQIGMMVAPTTIA-SQYLAQAWRGAV 294
+L L++ +P +WGA E L A + +G + TI+ S ++ A AV
Sbjct: 476 ILGFALALVALPLLALYWGAREAE---LTEIWARIMMGFDIGGVTISPSNFMTFALVFAV 532
Query: 295 ILSFVWFLHRWKTNVFTRAMASQSIAGLDREKMLALDRISSVGLFVIGLMALAEACGVAV 354
+ L N + I + ++A +G+F+ L+A+ A G +
Sbjct: 533 GYTITRLLQGGLRNSL---LPKTRIDPGGQNAIVA--GTGYLGIFLAALLAITMA-GFDL 586
Query: 355 QSILTVGGIGGVATAFASRDVLGNVLSGLSMQFSKPFSLGDTIKAGSVEGQVVEMGLTTT 414
S+ V G V F + ++ N +SG+ + +P S GD I G V ++ + +T
Sbjct: 587 SSLAIVAGALSVGIGFGLQTIVSNFVSGIILLIERPISKGDWIDVNGQMGYVRDISVRST 646
Query: 415 TLLSAEKFPVIVPNSMFSSQVIVNKSRAPWRALVIRIPMQI---DDLDKVPQISDDV 468
+ + ++ VI+PNS S + N +R VI +P+ + D KV I ++
Sbjct: 647 RIETFDRTDVIIPNSDLISGSVTNYTRGNTVGRVI-VPVGVAYGTDTRKVEAILREI 702
Score = 39 (18.8 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 237 LSGGLSIEQVPY 248
L G + +EQVPY
Sbjct: 279 LRGAILLEQVPY 290
>TIGR_CMR|GSU_1723 [details] [associations]
symbol:GSU_1723 "mechanosensitive ion channel family
protein" species:243231 "Geobacter sulfurreducens PCA" [GO:0005216
"ion channel activity" evidence=ISS] [GO:0006810 "transport"
evidence=ISS] InterPro:IPR006685 InterPro:IPR011066 Pfam:PF00924
GO:GO:0016020 GO:GO:0055085 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR010920 SUPFAM:SSF50182 GO:GO:0004146 SUPFAM:SSF82689
HOGENOM:HOG000135726 RefSeq:NP_952773.1 ProteinModelPortal:Q74CF1
GeneID:2685479 KEGG:gsu:GSU1723 PATRIC:22026293 OMA:TYMRPFK
ProtClustDB:CLSK2306778 BioCyc:GSUL243231:GH27-1675-MONOMER
Uniprot:Q74CF1
Length = 545
Score = 127 (49.8 bits), Expect = 0.00010, P = 0.00010
Identities = 40/153 (26%), Positives = 69/153 (45%)
Query: 365 GVATAFASRDVLGNVLSGLSMQFSKPFSLGDTIKAGSVEGQVVEMGLTTTTLLSAEKFPV 424
GV + S + NV++G+ + + + + +GD IK G G VVE L T L + + V
Sbjct: 340 GVLFSLGSTSAVANVVAGIIITYMRAYRIGDRIKVGETVGDVVEKNLLITRLRTIKNVDV 399
Query: 425 IVPNSMFSSQVIVN-KSRAPWRALVIRIPMQIDDLDKVPQISDDVKSMLRSNTKVFLGKE 483
+PNS+ S +VN S A L++ + I Q+ + + S R T+ L
Sbjct: 400 TIPNSLLLSSHVVNYSSSAQEYGLILNTSVTIGYDTPWRQVHELLISAAR-RTEHVLELP 458
Query: 484 APYCFLSQIESSFA--ELNVGCNLKQMVKFLFS 514
P+ + + + ELN + + L+S
Sbjct: 459 EPFILQTALNDFYVTYELNAYTDKPNRMANLYS 491
>POMBASE|SPAC2C4.17c [details] [associations]
symbol:SPAC2C4.17c "MS ion channel protein 2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005509
"calcium ion binding" evidence=IEA] [GO:0008381 "mechanically-gated
ion channel activity" evidence=ISM] [GO:0016021 "integral to
membrane" evidence=ISM] [GO:0033554 "cellular response to stress"
evidence=IEP] [GO:0034220 "ion transmembrane transport"
evidence=ISM] InterPro:IPR002048 InterPro:IPR006685 Pfam:PF00924
PomBase:SPAC2C4.17c GO:GO:0016021 EMBL:CU329670 GO:GO:0033554
GO:GO:0005509 InterPro:IPR010920 SUPFAM:SSF50182 GO:GO:0004146
GO:GO:0008381 eggNOG:COG0668 InterPro:IPR016688 PIRSF:PIRSF017209
PIR:T38528 RefSeq:NP_594520.1 ProteinModelPortal:O14050
EnsemblFungi:SPAC2C4.17c.1 GeneID:2541425 KEGG:spo:SPAC2C4.17c
OMA:YSSESAN OrthoDB:EOG4RNFHK NextBio:20802528 Uniprot:O14050
Length = 840
Score = 125 (49.1 bits), Expect = 0.00030, P = 0.00030
Identities = 43/177 (24%), Positives = 85/177 (48%)
Query: 310 FTRAMASQ--SIAGLDREKMLALDRISSVGLFVIGLMALAEACG---VAVQSILTVGGIG 364
FTR ++ + SI+ R+ LAL ++ VGL V+G++A+ + +IL G
Sbjct: 420 FTREISIEFRSISSSLRDVDLALGKLDRVGLGVVGIIAVLTFISFLDTSFATILAAFGTT 479
Query: 365 GVATAFASRDVLGNVLSGLSMQFSK-PFSLGDTIKAGSVEGQVVEMGLTTTTLLSAEKFP 423
++ +F ++S + FSK PF + D + +++ +VV + L T +
Sbjct: 480 LLSLSFVFSTSAQELMSSIIFLFSKHPFDISDVVIVNNIKYEVVSLSLLFTVFRTMGGST 539
Query: 424 VIVPNSMFSSQVIVNKSRAPWRALVIRIPMQI-DDLDKVPQISDDVKSMLRSNTKVF 479
V PNS+ ++ I N R+ ++ I I D ++ ++ D + + ++ N + F
Sbjct: 540 VQAPNSLLNTLFIENLRRSQPQSETITIVSPFATDFKQLERLRDLLLTFVKENERDF 596
>TIGR_CMR|SO_0588 [details] [associations]
symbol:SO_0588 "transporter, putative" species:211586
"Shewanella oneidensis MR-1" [GO:0005215 "transporter activity"
evidence=ISS] [GO:0006810 "transport" evidence=ISS]
InterPro:IPR006685 InterPro:IPR006686 InterPro:IPR011014
InterPro:IPR011066 Pfam:PF00924 PROSITE:PS01246 GO:GO:0016020
GO:GO:0055085 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR010920 SUPFAM:SSF50182 GO:GO:0004146 KO:K05802
InterPro:IPR025692 Pfam:PF12794 SUPFAM:SSF82689 SUPFAM:SSF82861
HOGENOM:HOG000281473 OMA:LLVIYHI RefSeq:NP_716223.1
ProteinModelPortal:Q8EJ80 GeneID:1168455 KEGG:son:SO_0588
PATRIC:23520860 ProtClustDB:CLSK905830 Uniprot:Q8EJ80
Length = 1067
Score = 126 (49.4 bits), Expect = 0.00031, P = 0.00031
Identities = 31/135 (22%), Positives = 67/135 (49%)
Query: 329 ALDRISSVGLFVIGLMALAEACGVAVQSILTVGGIGGVATAFASRDVLGNVLSGLSMQFS 388
A+ +S + +GL+ G+ + + + F +++ N +SGL + F
Sbjct: 842 AITTVSRYLVVFLGLLIGFSNLGMEWSKLQWLIAALSLGLGFGLQEIFANFISGLIILFE 901
Query: 389 KPFSLGDTIKAGSVEGQVVEMGLTTTTLLSAEKFPVIVPNSMFSSQVIVNKSRA-PWRAL 447
KP +GDT+ + G V ++ + TT++ ++ +I+PN F ++ ++N S + P +
Sbjct: 902 KPVRIGDTVTIRDLTGTVSKIQIRATTIIDWDRKEIIIPNKAFITEQLINWSLSDPITRV 961
Query: 448 VIRIPMQID-DLDKV 461
++ + + D D KV
Sbjct: 962 IVHVSVARDSDPAKV 976
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.134 0.396 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 525 525 0.00091 119 3 11 22 0.49 33
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 40
No. of states in DFA: 621 (66 KB)
Total size of DFA: 287 KB (2150 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 47.72u 0.14s 47.86t Elapsed: 00:00:02
Total cpu time: 47.73u 0.14s 47.87t Elapsed: 00:00:02
Start: Sat May 11 04:12:10 2013 End: Sat May 11 04:12:12 2013