BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009792
(525 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VZL4|MSL1_ARATH Mechanosensitive ion channel protein 1, mitochondrial
OS=Arabidopsis thaliana GN=MSL1 PE=2 SV=1
Length = 497
Score = 550 bits (1417), Expect = e-155, Method: Compositional matrix adjust.
Identities = 271/420 (64%), Positives = 331/420 (78%), Gaps = 9/420 (2%)
Query: 95 PTSKNFCSR-RLATFASISPFLGHRSYSSFFGSKTDKSTEIDVPAASSGSETDVSNHGIV 153
P+ +F S RL A +LGH SY+ F SK+D D + + T +
Sbjct: 49 PSMISFSSNIRLHNDAKPFNYLGHSSYARAFSSKSD-----DFGSIVASGVTGSGDGNGN 103
Query: 154 GSDSFDKIKDAWKSVVDGVSYTGQKAKD---ELSPQIEQLLDAHPYLRDVIVPVSCYLTG 210
G+D +K KD ++ VD V+ T +K KD E+ P ++Q LD++PYL+DVIVPVS +TG
Sbjct: 104 GNDWVEKAKDVLQTSVDAVTETAKKTKDVSDEMIPHVQQFLDSNPYLKDVIVPVSLTMTG 163
Query: 211 TVLAWVVMPRVLRRFHKYAIQGPVSLLSGGLSIEQVPYEKSFWGALEDPVRYLITFMAFV 270
T+ AWVVMPR+LRRFH YA+Q LL G S E VPYEKSFWGALEDP RYL+TF+AF
Sbjct: 164 TLFAWVVMPRILRRFHTYAMQSSAKLLPVGFSNEDVPYEKSFWGALEDPARYLVTFIAFA 223
Query: 271 QIGMMVAPTTIASQYLAQAWRGAVILSFVWFLHRWKTNVFTRAMASQSIAGLDREKMLAL 330
QI MVAPTTIA+QY + +GAVILS VWFL+RWKTNV TR ++++S GLDREK+L L
Sbjct: 224 QIAAMVAPTTIAAQYFSPTVKGAVILSLVWFLYRWKTNVITRMLSAKSFGGLDREKVLTL 283
Query: 331 DRISSVGLFVIGLMALAEACGVAVQSILTVGGIGGVATAFASRDVLGNVLSGLSMQFSKP 390
D++SSVGLF IGLMA AEACGVAVQSILTVGG+GGVATAFA+RD+LGNVLSGLSMQFS+P
Sbjct: 284 DKVSSVGLFAIGLMASAEACGVAVQSILTVGGVGGVATAFAARDILGNVLSGLSMQFSRP 343
Query: 391 FSLGDTIKAGSVEGQVVEMGLTTTTLLSAEKFPVIVPNSMFSSQVIVNKSRAPWRALVIR 450
FS+GDTIKAGSVEGQV+EMGLTTT+LL+AEKFPV+VPNS+FSSQVIVNKSRA WRA+ +
Sbjct: 344 FSMGDTIKAGSVEGQVIEMGLTTTSLLNAEKFPVLVPNSLFSSQVIVNKSRAQWRAIASK 403
Query: 451 IPMQIDDLDKVPQISDDVKSMLRSNTKVFLGKEAPYCFLSQIESSFAELNVGCNLKQMVK 510
IP+QIDDLD +PQIS+++K MLRSNTKVFLGKEAP+C+LS++E SFAEL +GCNL +M K
Sbjct: 404 IPLQIDDLDMIPQISNEIKEMLRSNTKVFLGKEAPHCYLSRVEKSFAELTIGCNLIRMGK 463
>sp|P0AEB5|YNAI_ECOLI MscS family inner membrane protein YnaI OS=Escherichia coli (strain
K12) GN=ynaI PE=1 SV=1
Length = 343
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 113/219 (51%), Gaps = 9/219 (4%)
Query: 293 AVILSFVWFLHRWKTNVFTRAMASQSIAGLDREKMLALDRISSVGLFVIGLMALAEACGV 352
AVIL+ FL N F + Q G D + RI + + V+ ++ E G+
Sbjct: 87 AVILTIKLFLL---INQFEK---QQIKKGRDITSARIMSRIIKITIIVVLVLLYGEHFGM 140
Query: 353 AVQSILTVGGIGGVATAFASRDVLGNVLSGLSMQFSKPFSLGDTIKA--GSVEGQVVEMG 410
++ +LT GGIGG+A A +D+L N SG+ + F +PFS+GD I++ ++EG V E+G
Sbjct: 141 SLSGLLTFGGIGGLAVGMAGKDILSNFFSGIMLYFDRPFSIGDWIRSPDRNIEGTVAEIG 200
Query: 411 LTTTTLLSAEKFPVIVPNSMFSSQVIVNKSRAPWRALVIRIPMQIDDLDKVPQISDDVKS 470
T + + + P+ VPNS+FSS + N R R + I ++ +D KV I + V+
Sbjct: 201 WRITKITTFDNRPLYVPNSLFSSISVENPGRMTNRRITTTIGLRYEDAAKVGVIVEAVRE 260
Query: 471 MLRSNTKVFLGKEAPYCFLSQIESSFAELNVGCNLKQMV 509
ML+++ + ++ + +Q S + V C K V
Sbjct: 261 MLKNHPAI-DQRQTLLVYFNQFADSSLNIMVYCFTKTTV 298
>sp|P0AEB6|YNAI_ECO57 MscS family inner membrane protein YnaI OS=Escherichia coli O157:H7
GN=ynaI PE=3 SV=1
Length = 343
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 113/219 (51%), Gaps = 9/219 (4%)
Query: 293 AVILSFVWFLHRWKTNVFTRAMASQSIAGLDREKMLALDRISSVGLFVIGLMALAEACGV 352
AVIL+ FL N F + Q G D + RI + + V+ ++ E G+
Sbjct: 87 AVILTIKLFLL---INQFEK---QQIKKGRDITSARIMSRIIKITIIVVLVLLYGEHFGM 140
Query: 353 AVQSILTVGGIGGVATAFASRDVLGNVLSGLSMQFSKPFSLGDTIKA--GSVEGQVVEMG 410
++ +LT GGIGG+A A +D+L N SG+ + F +PFS+GD I++ ++EG V E+G
Sbjct: 141 SLSGLLTFGGIGGLAVGMAGKDILSNFFSGIMLYFDRPFSIGDWIRSPDRNIEGTVAEIG 200
Query: 411 LTTTTLLSAEKFPVIVPNSMFSSQVIVNKSRAPWRALVIRIPMQIDDLDKVPQISDDVKS 470
T + + + P+ VPNS+FSS + N R R + I ++ +D KV I + V+
Sbjct: 201 WRITKITTFDNRPLYVPNSLFSSISVENPGRMTNRRITTTIGLRYEDAAKVGVIVEAVRE 260
Query: 471 MLRSNTKVFLGKEAPYCFLSQIESSFAELNVGCNLKQMV 509
ML+++ + ++ + +Q S + V C K V
Sbjct: 261 MLKNHPAI-DQRQTLLVYFNQFADSSLNIMVYCFTKTTV 298
>sp|O25170|Y415_HELPY Uncharacterized MscS family protein HP_0415 OS=Helicobacter pylori
(strain ATCC 700392 / 26695) GN=HP_0415 PE=3 SV=1
Length = 623
Score = 86.3 bits (212), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 101/204 (49%), Gaps = 12/204 (5%)
Query: 290 WRGAV-ILSFVWF---LHRWKTNVFTRAMASQSIAGLDREKMLALDRISSVGLFVIGLMA 345
W GAV I+ W L + MA++S +E + + ++ +F++ L+
Sbjct: 321 WVGAVYIMLLAWLVIALFKGYGEALVTNMATKSTHNFRKEVINLILKVVYFLIFIVALLG 380
Query: 346 LAEACGVAVQSILTVGGIGGVATAFASRDVLGNVLSGLSMQFSKPFSLGDTIKAGSVEGQ 405
+ + G V +I+ GIGG+A A A +DVL N + + + FS GD I G VEG
Sbjct: 381 VLKQLGFNVSAIIASLGIGGLAVALAVKDVLANFFASVILLLDNSFSQGDWIVCGEVEGT 440
Query: 406 VVEMGLTTTTLLSAEKFPVIVPNSMFSSQVIVNKSRAPWRALVIRIPMQIDDLDKVPQIS 465
VVEMGL TT+ + + + VPNS + + I N SR R + RI M+I Q +
Sbjct: 441 VVEMGLRRTTIRAFDNALLSVPNSELAGKPIRNWSR---RKVGRRIKMEIGLTYSSSQSA 497
Query: 466 -----DDVKSMLRSNTKVFLGKEA 484
D+K ML ++ K+ G ++
Sbjct: 498 LQLCVKDIKEMLENHPKIANGADS 521
>sp|Q9ZKG7|Y415_HELPJ Uncharacterized MscS family protein jhp_0969 OS=Helicobacter pylori
(strain J99) GN=jhp_0969 PE=3 SV=1
Length = 623
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 12/204 (5%)
Query: 290 WRGAV-ILSFVWF---LHRWKTNVFTRAMASQSIAGLDREKMLALDRISSVGLFVIGLMA 345
W GAV I+ W L + +A++S +E + + ++ +F++ L+
Sbjct: 321 WVGAVYIMLLAWLVIALFKGYGEALVTNVATKSTHNFRKEVINLILKVVYFLIFIVALLG 380
Query: 346 LAEACGVAVQSILTVGGIGGVATAFASRDVLGNVLSGLSMQFSKPFSLGDTIKAGSVEGQ 405
+ + G V +I+ GIGG+A A A +DVL N + + + FS GD I G VEG
Sbjct: 381 VLKQLGFNVSAIIASLGIGGLAVALAVKDVLANFFASVILLLDNSFSQGDWIVCGEVEGT 440
Query: 406 VVEMGLTTTTLLSAEKFPVIVPNSMFSSQVIVNKSRAPWRALVIRIPMQIDDLDKVPQIS 465
VVEMGL TT+ + + + VPNS + + I N SR R + RI M+I Q +
Sbjct: 441 VVEMGLRRTTIRAFDNALLSVPNSELAGKPIRNWSR---RKVGRRIKMEIGLTYSSSQSA 497
Query: 466 -----DDVKSMLRSNTKVFLGKEA 484
D+K ML ++ K+ G ++
Sbjct: 498 LQLCVKDIKEMLENHPKIANGADS 521
>sp|P0C0S3|MSCS_SHIFL Small-conductance mechanosensitive channel OS=Shigella flexneri
GN=mscS PE=3 SV=1
Length = 286
Score = 65.9 bits (159), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 91/184 (49%), Gaps = 7/184 (3%)
Query: 301 FLHRWKTNVFTRAMASQSIAGLDREKMLALDRISSVGLFVIGLMALAEACGVAVQSILTV 360
+ R +N R M S+ I + + AL R G+ L+A GV S++ V
Sbjct: 43 IIARMISNAVNRLMISRKIDATVADFLSALVR---YGIIAFTLIAALGRVGVQTASVIAV 99
Query: 361 GGIGGVATAFASRDVLGNVLSGLSMQFSKPFSLGDTIKAGSVEGQVVEMGLTTTTLLSAE 420
G G+A A + L N+ +G+ + +PF G+ + G V G V+ + + +TT+ +A+
Sbjct: 100 LGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTAD 159
Query: 421 KFPVIVPNSMFSSQVIVNKSRAPWRALVIRIPMQID-DLDKVPQISDDVKSMLRSNTKVF 479
+++PN + I+N SR P R I + D D+D+V QI + ++++S ++
Sbjct: 160 GKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQI---LTNIIQSEDRIL 216
Query: 480 LGKE 483
+E
Sbjct: 217 KDRE 220
>sp|P0C0S1|MSCS_ECOLI Small-conductance mechanosensitive channel OS=Escherichia coli
(strain K12) GN=mscS PE=1 SV=1
Length = 286
Score = 65.9 bits (159), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 91/184 (49%), Gaps = 7/184 (3%)
Query: 301 FLHRWKTNVFTRAMASQSIAGLDREKMLALDRISSVGLFVIGLMALAEACGVAVQSILTV 360
+ R +N R M S+ I + + AL R G+ L+A GV S++ V
Sbjct: 43 IIARMISNAVNRLMISRKIDATVADFLSALVR---YGIIAFTLIAALGRVGVQTASVIAV 99
Query: 361 GGIGGVATAFASRDVLGNVLSGLSMQFSKPFSLGDTIKAGSVEGQVVEMGLTTTTLLSAE 420
G G+A A + L N+ +G+ + +PF G+ + G V G V+ + + +TT+ +A+
Sbjct: 100 LGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTAD 159
Query: 421 KFPVIVPNSMFSSQVIVNKSRAPWRALVIRIPMQID-DLDKVPQISDDVKSMLRSNTKVF 479
+++PN + I+N SR P R I + D D+D+V QI + ++++S ++
Sbjct: 160 GKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQI---LTNIIQSEDRIL 216
Query: 480 LGKE 483
+E
Sbjct: 217 KDRE 220
>sp|P0C0S2|MSCS_ECO57 Small-conductance mechanosensitive channel OS=Escherichia coli
O157:H7 GN=mscS PE=1 SV=1
Length = 286
Score = 65.9 bits (159), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 91/184 (49%), Gaps = 7/184 (3%)
Query: 301 FLHRWKTNVFTRAMASQSIAGLDREKMLALDRISSVGLFVIGLMALAEACGVAVQSILTV 360
+ R +N R M S+ I + + AL R G+ L+A GV S++ V
Sbjct: 43 IIARMISNAVNRLMISRKIDATVADFLSALVR---YGIIAFTLIAALGRVGVQTASVIAV 99
Query: 361 GGIGGVATAFASRDVLGNVLSGLSMQFSKPFSLGDTIKAGSVEGQVVEMGLTTTTLLSAE 420
G G+A A + L N+ +G+ + +PF G+ + G V G V+ + + +TT+ +A+
Sbjct: 100 LGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTAD 159
Query: 421 KFPVIVPNSMFSSQVIVNKSRAPWRALVIRIPMQID-DLDKVPQISDDVKSMLRSNTKVF 479
+++PN + I+N SR P R I + D D+D+V QI + ++++S ++
Sbjct: 160 GKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQI---LTNIIQSEDRIL 216
Query: 480 LGKE 483
+E
Sbjct: 217 KDRE 220
>sp|Q8L7W1|MSL3_ARATH Mechanosensitive ion channel protein 3, chloroplastic
OS=Arabidopsis thaliana GN=MSL3 PE=2 SV=1
Length = 678
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 348 EACGVAVQSILTVGGIGGVATAFASRDVLGNVLSGLSMQFSKPFSLGDTIKAG----SVE 403
E G + Q LT GG+G V A R++L N LS + + ++PF L + I+ V
Sbjct: 257 ELLGFSTQKWLTAGGLGTVLLTLAGREILTNFLSSIMIHATRPFVLNEWIQTKIGGYEVS 316
Query: 404 GQVVEMGLTTTTLLSA-EKFPVIVPNSMFSSQVIVN-KSRAPWRALVIRIPMQIDDLD-- 459
G V ++G + T++ ++ V +PN FS ++ N + WR I+ + I LD
Sbjct: 317 GTVEQVGWWSPTIIRGDDREAVHIPNHQFSVNIVRNLTQKTHWR---IKTHLAISHLDVS 373
Query: 460 KVPQISDDVKSMLRSNTKVFLGKEAPYCFLSQIESSFAELNVGCNLKQMVKFLFSCF 516
K+ I D++ +L N ++ K FL I+ Q ++ L SCF
Sbjct: 374 KINNIVADMRKVLSKNPQIEQQKIHRRVFLEDIDPE----------NQALRILISCF 420
>sp|O52401|MSCS_EDWI9 Small-conductance mechanosensitive channel OS=Edwardsiella ictaluri
(strain 93-146) GN=mscS PE=3 SV=1
Length = 286
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 64/120 (53%), Gaps = 1/120 (0%)
Query: 350 CGVAVQSILTVGGIGGVATAFASRDVLGNVLSGLSMQFSKPFSLGDTIKAGSVEGQVVEM 409
GV S++ V G G+A A + L N +G+ + +PF G+ + G V G V E+
Sbjct: 89 LGVQTTSVIAVLGAAGLAVGLALQGSLSNFAAGVLLVLFRPFRAGEVVDLGGVTGTVREV 148
Query: 410 GLTTTTLLSAEKFPVIVPNSMFSSQVIVNKSRAPWRALVIRIPMQID-DLDKVPQISDDV 468
+ +TTL +A+ ++VPN + I+N SR P R + I + + D D+D V ++ DV
Sbjct: 149 QIFSTTLATADNKVIVVPNGKIIAGNIINFSREPKRRIDIIVGVAYDADIDVVKRVLGDV 208
>sp|O07594|YHDY_BACSU Uncharacterized MscS family protein YhdY OS=Bacillus subtilis
(strain 168) GN=yhdY PE=3 SV=1
Length = 371
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 67/132 (50%), Gaps = 2/132 (1%)
Query: 322 LDREKMLA--LDRISSVGLFVIGLMALAEACGVAVQSILTVGGIGGVATAFASRDVLGNV 379
LD + +LA L ++ + + + +A+ V + G+GG+A A A++D + N
Sbjct: 127 LDMDDILAPFLSKLLRFVIIALSVSVIAQEFNYDVNGFVAGLGLGGLAFALAAKDTISNF 186
Query: 380 LSGLSMQFSKPFSLGDTIKAGSVEGQVVEMGLTTTTLLSAEKFPVIVPNSMFSSQVIVNK 439
G+ + KPF++GD ++ +V G V ++ +T +A+ V VPNS S + I N
Sbjct: 187 FGGIIIITEKPFTIGDWVETSTVTGSVEDITFRSTRFRTAQGALVTVPNSTLSMEAITNW 246
Query: 440 SRAPWRALVIRI 451
+R R + I
Sbjct: 247 TRMTKRQITFSI 258
>sp|O28726|Y1546_ARCFU Uncharacterized MscS family protein AF_1546 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=AF_1546 PE=3 SV=1
Length = 283
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 66/118 (55%), Gaps = 1/118 (0%)
Query: 319 IAGLDREKMLALDRISSVGLFVIGLMALAEACGVAVQSILTVGGIGGVATAFASRDVLGN 378
I + R+++ + ++ G+ ++ +A+ A G+ + +L GGI G+ FAS+ V+ N
Sbjct: 47 IDKMKRDQLELMLKVIYFGIIIVAFIAVLPALGLDLSGLLVAGGITGIVLGFASQSVVAN 106
Query: 379 VLSGLSMQFSKPFSLGDTIKAGSVEGQVVEMGLTTTTLLSAEKFPVIVPNS-MFSSQV 435
++SG+ + KP +GD + V G V ++ + +T + + + V +PN +F+S +
Sbjct: 107 LVSGIFLISEKPIKIGDQVNIDGVAGFVEDVNILSTIIRTYDGLYVRIPNEKVFTSNI 164
>sp|Q56X46|MSL2_ARATH Mechanosensitive ion channel protein 2, chloroplastic
OS=Arabidopsis thaliana GN=MSL2 PE=2 SV=1
Length = 673
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 84/192 (43%), Gaps = 28/192 (14%)
Query: 333 ISSVGLFVIGLMALAEACGVAVQSILTVGGIGGVATAFASRDVLGNVLSGLSMQFSKPFS 392
+++V LF+ E G + Q LT GG+G V A R++L N LS + + ++PF
Sbjct: 247 VAAVSLFM-------ELLGFSTQKWLTAGGLGTVLITLAGREILTNFLSSVMIHATRPFV 299
Query: 393 LGD----TIKAGSVEGQVVEMGLTTTTLLSAEKFPVI-VPNSMFSSQVIVN-KSRAPWRA 446
L + I+ V G V +G + T++ E I +PN F+ V+ N + WR
Sbjct: 300 LNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGEDREAIHIPNHKFTVNVVRNLTQKTHWR- 358
Query: 447 LVIRIPMQIDDLD--KVPQISDDVKSMLRSNTKVFLGKEAPYCFLSQIESSFAELNVGCN 504
I+ + I LD K+ I D++ +L N V + FL +
Sbjct: 359 --IKTHLAISHLDVNKINNIVADMRKVLAKNPMVEQQRLHRRVFLENVIPE--------- 407
Query: 505 LKQMVKFLFSCF 516
Q + L SCF
Sbjct: 408 -NQALSILISCF 418
>sp|P77338|KEFA_ECOLI Potassium efflux system KefA OS=Escherichia coli (strain K12) GN=kefA
PE=1 SV=1
Length = 1120
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 68/129 (52%), Gaps = 2/129 (1%)
Query: 338 LFVIGLMALAEACGVAVQSILTVGGIGGVATAFASRDVLGNVLSGLSMQFSKPFSLGDTI 397
+ +G M + + GV+ + + V F +++ GN +SGL + F +P +GDT+
Sbjct: 893 IIAVGAMTVFGSLGVSWDKLQWLAAALSVGLGFGLQEIFGNFVSGLIILFERPVRIGDTV 952
Query: 398 KAGSVEGQVVEMGLTTTTLLSAEKFPVIVPNSMFSSQVIVNKSRAPWRA-LVIRIPMQI- 455
GS G V ++ + TT+ ++ VI+PN F ++ ++N S LVIR+ +
Sbjct: 953 TIGSFSGTVSKIRIRATTITDFDRKEVIIPNKAFVTERLINWSLTDTTTRLVIRLGVAYG 1012
Query: 456 DDLDKVPQI 464
DL+KV ++
Sbjct: 1013 SDLEKVRKV 1021
>sp|O66994|Y812_AQUAE Uncharacterized MscS family protein aq_812 OS=Aquifex aeolicus
(strain VF5) GN=aq_812 PE=3 SV=1
Length = 368
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 255 ALEDPVRYLITFMAF-VQIGMMVAPTTIASQYL---AQAWRGAVILSFVWFLHRWKTNVF 310
A P Y I F + + ++ P A ++L + G I+ F+ H F
Sbjct: 73 AFVKPFSYFIVVFGFYLSLLVLEVPKVYADKFLKTFSLLILGWAIIRFLNLFHNKIVEFF 132
Query: 311 TRAMASQSIAGLDREKMLALDRISSVGLFVIGLM--ALAEACGVAVQSILTVGGIGGVAT 368
+ + G D + + + + FV+ ++ +L + GV + +IL G+ G+A
Sbjct: 133 VK------VGGKDFAEEVGDFILKILKAFVVVIVGASLLQEWGVNIGAILASVGLLGLAV 186
Query: 369 AFASRDVLGNVLSGLSMQFSKPFSLGDTIKAGSVEGQVVEMGLTTTTLLSAEKFPVIVPN 428
+ A++D N+LSGL + KP +G+T+K G V ++GL +T + + +K V +PN
Sbjct: 187 SLAAKDTFENILSGLIILLDKPVKVGETVKVKDFMGSVEDIGLRSTKIRTFDKSLVTIPN 246
Query: 429 SMFSSQVIVNKSRAPWR 445
+ + N +R R
Sbjct: 247 RDIVNNHVENFTRRNKR 263
>sp|Q8K9B1|Y437_BUCAP Uncharacterized MscS family protein BUsg_437 OS=Buchnera aphidicola
subsp. Schizaphis graminum (strain Sg) GN=BUsg_437 PE=3
SV=1
Length = 283
Score = 55.8 bits (133), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 85/177 (48%), Gaps = 9/177 (5%)
Query: 343 LMALAEACGVAVQSILTVGGIGGVATAFASRDVLGNVLSGLSMQFSKPFSLGDTIKAGSV 402
L+A GV S++ + G G+A A + L N +G+ + +P G+ + G+V
Sbjct: 82 LIASLGRIGVQTTSVIAILGAAGMAIGLALQGSLSNFAAGVLLVTLRPLKTGEYVNLGNV 141
Query: 403 EGQVVEMGLTTTTLLSAEKFPVIVPNSMFSSQVIVNKSRAPWR----ALVIRIPMQIDDL 458
G V+ + + TTL + + V+VPN+ S I+N SR P R ++ + ID +
Sbjct: 142 AGTVLNIHIFYTTLRTLDGKIVVVPNNKIISGNIINYSREPARRNEFSISVSYNTDIDLV 201
Query: 459 DKVPQ--ISDDVKSMLRSNTKVFLGKEAP--YCFLSQIESSFAELNVGCNLKQMVKF 511
KV + I ++ + M + + L + AP F+ + SS ELN MVKF
Sbjct: 202 IKVLKRVIENEDRVMKDRDIVIGLSELAPSSLNFIIRCWSSTDELN-AVYWDLMVKF 257
>sp|Q57634|MSMJS_METJA Small-conductance mechanosensitive channel MscMJ
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0170
PE=1 SV=1
Length = 350
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 109/217 (50%), Gaps = 5/217 (2%)
Query: 263 LITFMAFVQIGMMVAPTTIASQYLAQAWRGAVILSFVWFLHRWKTNVFTR---AMASQSI 319
++T + + ++ P I + + +A + VILS +F ++ +F + ++
Sbjct: 65 VVTLFFYFGLRFLILPDYIL-KLIDEAVKVVVILSATYFAVKFIDGIFEHYLIPLTEKTE 123
Query: 320 AGLDREKMLALDRISSVGLFVIGLMALAEACGVAVQSILTVGGIGGVATAFASRDVLGNV 379
LD + L ++ + ++G++ + G + ++L G+GG+A A A +D + N
Sbjct: 124 TELDEHIIKPLKKVVKILTILLGILTALSSVGYDITALLAGLGVGGLALALAMQDTIKNF 183
Query: 380 LSGLSMQFSKPFSLGDTIKAGSVEGQVVEMGLTTTTLLSAEKFPVIVPNSMFSSQVIVNK 439
++G+ + KPFSLG +K EG V E+G+ +T + + + + +PNS I N
Sbjct: 184 IAGILILIDKPFSLGHWVKVKGAEGIVEEIGIRSTRIRTFDYTLITIPNSELLDSAIENL 243
Query: 440 SRAPWRALVIRIPMQIDD-LDKVPQISDDVKSMLRSN 475
+ R +++ I + + ++K+ + + +K ++ ++
Sbjct: 244 TVRDRRRVLMTIGLTYNTPVEKIKRAKEIIKEIVENH 280
>sp|Q89AB5|Y402_BUCBP Uncharacterized MscS family protein bbp_402 OS=Buchnera aphidicola
subsp. Baizongia pistaciae (strain Bp) GN=bbp_402 PE=3
SV=1
Length = 281
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 86/185 (46%), Gaps = 7/185 (3%)
Query: 300 WFLHRWKTNVFTRAMASQSIAGLDREKMLALDRISSVGLFVIGLMALAEACGVAVQSILT 359
+F + +N+ + + +Q I + AL R + L+A GV S++
Sbjct: 42 FFAAKIISNLINKVLITQKIDTTIANFLAALVRYI---IITFALIASLGCIGVQTTSVIA 98
Query: 360 VGGIGGVATAFASRDVLGNVLSGLSMQFSKPFSLGDTIKAGSVEGQVVEMGLTTTTLLSA 419
+ G G+A A + L N +G+ + +PF G+ + + G V+ + + TT +
Sbjct: 99 ILGAAGMAIGLALQGSLSNFAAGVLLVILRPFRTGEYVNLEKISGTVLNIHVFYTTFRTL 158
Query: 420 EKFPVIVPNSMFSSQVIVNKSRAPWRALVIRIPMQID-DLDKVPQISDDVKSMLRSNTKV 478
+ V++PN S I+N SR R I + D D+DKV +I +K+++++ +V
Sbjct: 159 DGKIVVIPNGKIISGNIINYSREKARRNEFIIGVSYDSDIDKVIKI---LKNVVKNEKRV 215
Query: 479 FLGKE 483
++
Sbjct: 216 LKDRD 220
>sp|P39285|YJEP_ECOLI Uncharacterized MscS family protein YjeP OS=Escherichia coli
(strain K12) GN=yjeP PE=3 SV=3
Length = 1107
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%)
Query: 365 GVATAFASRDVLGNVLSGLSMQFSKPFSLGDTIKAGSVEGQVVEMGLTTTTLLSAEKFPV 424
GV F +++ N +SGL + F KP +GDT+ + G V ++ TT+ ++ +
Sbjct: 908 GVGLGFGLQEIFANFISGLIILFEKPIRIGDTVTIRDLTGSVTKINTRATTISDWDRKEI 967
Query: 425 IVPNSMFSSQVIVNKS 440
IVPN F ++ +N S
Sbjct: 968 IVPNKAFITEQFINWS 983
>sp|P57527|Y452_BUCAI Uncharacterized MscS family protein BU452 OS=Buchnera aphidicola
subsp. Acyrthosiphon pisum (strain APS) GN=BU452 PE=3
SV=1
Length = 305
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 67/136 (49%), Gaps = 6/136 (4%)
Query: 350 CGVAVQSILTVGGIGGVATAFASRDVLGNVLSGLSMQFSKPFSLGDTIKAGSVEGQVVEM 409
GV S++ + G G+A A + L N +G+ + +P + + GSV G V+ +
Sbjct: 113 IGVQTTSVIAILGAAGMAIGLALQGSLSNFAAGVLLVTLRPLKTEEYVDLGSVSGTVLNI 172
Query: 410 GLTTTTLLSAEKFPVIVPNSMFSSQVIVNKSRAPWR--ALVIRIPMQIDDLDKVPQISDD 467
+ TTL + + V+VPN+ S I+N SR P R +I + D+D V +I
Sbjct: 173 HIFYTTLRTLDGKIVVVPNNKIISGNIINYSREPARRNEFIISVSYN-SDIDLVIKI--- 228
Query: 468 VKSMLRSNTKVFLGKE 483
++S++ +V K+
Sbjct: 229 LRSVIEKEERVIKDKD 244
>sp|O34897|YKUT_BACSU Uncharacterized MscS family protein YkuT OS=Bacillus subtilis
(strain 168) GN=ykuT PE=2 SV=2
Length = 267
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 66/121 (54%), Gaps = 6/121 (4%)
Query: 356 SILTVGGIGGVATAFASRDVLGNVLSGLSMQFSKPFSLGDTIKAGSVEGQVVEMGLTTTT 415
++L GI G+A F ++ ++ ++++G + K +GD I + +G V ++GL TT
Sbjct: 92 ALLAGAGIVGLAVGFGAQGLVSDIVTGFFILLEKQLDVGDYITVSTFDGIVEQVGLRTTQ 151
Query: 416 LLSAEKFPVIVPNSMFSSQVIVNKSRAPWRALV-IRIPMQ--IDDLDKV-PQISDDVKSM 471
+ S + +PN ++ + N SR +ALV I++P + ID++ + Q+ D+ +
Sbjct: 152 IRSFDGTLHYIPNRNITN--VSNHSRGTMQALVDIKVPAERNIDEMIHILQQVCDETAAA 209
Query: 472 L 472
L
Sbjct: 210 L 210
>sp|Q57362|Y195A_HAEIN Uncharacterized MscS family protein HI_0195.1 OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=HI_0195.1 PE=1 SV=1
Length = 1111
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%)
Query: 366 VATAFASRDVLGNVLSGLSMQFSKPFSLGDTIKAGSVEGQVVEMGLTTTTLLSAEKFPVI 425
V F +++ N +SG+ + F +P +GD + V G V ++ + TL+ ++ VI
Sbjct: 921 VGLGFGMQEIFANFVSGIILLFERPIRVGDVVTINEVSGTVAKIRIRAITLIDFDRKEVI 980
Query: 426 VPNSMFSSQVIVN 438
VPN F + + N
Sbjct: 981 VPNKSFVTGQVTN 993
>sp|O14050|YEYH_SCHPO Uncharacterized MscS family protein C2C4.17c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC2C4.17c PE=3 SV=1
Length = 840
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 86/178 (48%), Gaps = 9/178 (5%)
Query: 310 FTRAMASQ--SIAGLDREKMLALDRISSVGLFVIGLMAL---AEACGVAVQSILTVGGIG 364
FTR ++ + SI+ R+ LAL ++ VGL V+G++A+ + +IL G
Sbjct: 420 FTREISIEFRSISSSLRDVDLALGKLDRVGLGVVGIIAVLTFISFLDTSFATILAAFGTT 479
Query: 365 GVATAFASRDVLGNVLSGLSMQFSK-PFSLGDTIKAGSVEGQVVEMGLTTTTLLSAEKFP 423
++ +F ++S + FSK PF + D + +++ +VV + L T +
Sbjct: 480 LLSLSFVFSTSAQELMSSIIFLFSKHPFDISDVVIVNNIKYEVVSLSLLFTVFRTMGGST 539
Query: 424 VIVPNSMFSSQVIVNKSRAPWRALVIRI--PMQIDDLDKVPQISDDVKSMLRSNTKVF 479
V PNS+ ++ I N R+ ++ I I P D ++ ++ D + + ++ N + F
Sbjct: 540 VQAPNSLLNTLFIENLRRSQPQSETITIVSPFAT-DFKQLERLRDLLLTFVKENERDF 596
>sp|Q58543|MSMJL_METJA Large-conductance mechanosensitive channel MscMJLR
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ1143
PE=1 SV=1
Length = 361
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 368 TAFASRDVLGNVLSGLSMQFSKPFSLGDTIKAGSVEGQVVEMGLTTTTLLSAEKFPVIVP 427
A AS++++ N+++GL + KPF +G+ I G V ++G+ +T + + + ++VP
Sbjct: 179 VALASQNLVSNLIAGLIILTDKPFKIGNWITFSGGSGIVEDIGIRSTKIRATDNSIIVVP 238
Query: 428 NSMFSSQVIVN-KSRAPWRA 446
NS ++I N S+ W+
Sbjct: 239 NSKLIDEIIQNVPSKNKWKV 258
>sp|Q55717|Y639_SYNY3 Uncharacterized MscS family protein slr0639 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=slr0639 PE=3 SV=1
Length = 296
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 61/126 (48%), Gaps = 4/126 (3%)
Query: 338 LFVIGLMALAEACGVAVQSILTVGGIGGVATAFASRDVLGNVLSGLSMQFSKPFSLGDTI 397
L V ++ LA+ G+ S++ + G +A A + L NV G+ + F +G+ I
Sbjct: 84 LVVFFVLCLAQ-LGIQTSSLVALLGASTLAIGLALQGSLANVAGGILLVLFNYFRVGERI 142
Query: 398 KAGSVEGQVVEMGLTTTTLLSAEKFPVIVPNSMFSSQVIVNKSRAPWRA--LVIRIPMQI 455
+ +EG V + + +TT+ + + V +PN I+N P R LVI + +
Sbjct: 143 EVAGIEGIVESIEILSTTICTYDNRLVTIPNKQIIENNIINHVGKPERRIDLVIGVGYE- 201
Query: 456 DDLDKV 461
+D+D V
Sbjct: 202 EDIDHV 207
>sp|P42531|Y1270_CORGL Uncharacterized protein Cgl1270/cg1434 OS=Corynebacterium
glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 /
LMG 3730 / NCIMB 10025) GN=Cgl1270 PE=4 SV=2
Length = 491
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 76/152 (50%), Gaps = 12/152 (7%)
Query: 336 VGLFVIGLMALAEACGVAVQSILTVGGIGGVATAFASRDVLGNVLSGLSMQFSKPFSLGD 395
V F++ + A+ +A G ++ I A ++ ++ + L+G + K F +GD
Sbjct: 34 VAFFMLAVSAM-QAFGFSLAGAAIPATIASAAIGLGAQSIVADFLAGFFILTEKQFGVGD 92
Query: 396 TIK-AGS---VEGQVVEMGLTTTTLLSAEKFPVIVPNSMFSSQVIVNKSRAPWRALVIRI 451
++ G+ VEG V+E+ + T + + + VI+PNS +++V +N S W V+ I
Sbjct: 93 WVRFEGNGIVVEGTVIEITMRATKIRTIAQETVIIPNS--TAKVCINNSNN-WSRAVVVI 149
Query: 452 PMQIDDLDKVPQISDDVKSMLRSNTKVFLGKE 483
P+ + + + DV + + T+ LG+E
Sbjct: 150 PIPMLGSENI----TDVIARSEAATRRALGQE 177
>sp|F4IME1|MSL7_ARATH Mechanosensitive ion channel protein 7 OS=Arabidopsis thaliana
GN=MSL7 PE=3 SV=1
Length = 849
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 390 PFSLGDTIKAGSVEGQVVEMGLTTTTLLSAEKFPVIVPNSMFSSQVIVNKSRAP 443
P+ +GD + +VE V EM + TT L A+ ++ PN + + I N +R+P
Sbjct: 664 PYDVGDRLLIDTVEMVVEEMNILTTVFLRADNLKIVYPNILLWQKAIHNYNRSP 717
>sp|Q9LH74|MSL5_ARATH Mechanosensitive ion channel protein 5 OS=Arabidopsis thaliana
GN=MSL5 PE=2 SV=1
Length = 881
Score = 39.7 bits (91), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 390 PFSLGDTIKAGSVEGQVVEMGLTTTTLLSAEKFPVIVPNSMFSSQVIVNKSRAP 443
PF +GD + V+ V EM + TT L + +I PNS+ ++ I N R+P
Sbjct: 700 PFDVGDRCEIDGVQLVVEEMNILTTVFLRYDNQKIIYPNSVLGTKPIANYYRSP 753
>sp|F4IME2|MSL8_ARATH Mechanosensitive ion channel protein 8 OS=Arabidopsis thaliana
GN=MSL8 PE=2 SV=2
Length = 908
Score = 38.9 bits (89), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 390 PFSLGDTIKAGSVEGQVVEMGLTTTTLLSAEKFPVIVPNSMFSSQVIVNKSRAP 443
P+ +GD + SV+ V EM + TT L + ++ PNS+ + I N R+P
Sbjct: 731 PYDVGDRCEIDSVQLVVEEMNILTTVFLRYDNLKIMYPNSLLWQKSINNYYRSP 784
>sp|Q9LPG3|MSL4_ARATH Mechanosensitive ion channel protein 4 OS=Arabidopsis thaliana
GN=MSL4 PE=3 SV=1
Length = 881
Score = 38.9 bits (89), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 390 PFSLGDTIKAGSVEGQVVEMGLTTTTLLSAEKFPVIVPNSMFSSQVIVNKSRAP 443
PF +GD + V+ V EM + TT L + ++ PNS+ ++ I N R+P
Sbjct: 701 PFDVGDRCEIDGVQMIVEEMNILTTVFLRFDNQKIVYPNSLLGTKPIANYYRSP 754
>sp|Q9LYG9|MSL10_ARATH Mechanosensitive ion channel protein 10 OS=Arabidopsis thaliana
GN=MSL10 PE=1 SV=1
Length = 734
Score = 38.9 bits (89), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 55/141 (39%), Gaps = 1/141 (0%)
Query: 304 RWKTNVFTRAMASQSIAGLDREKMLALDRISSVGLFVIGLMALAEACGVAVQSILTVGGI 363
W V+T A + + L+++ + L V+ ++ VA +L
Sbjct: 487 EWVVKVYTSRRALAHSLNDTKTAVKQLNKLVTAILMVVTVVIWLLLLEVATTKVLLFFST 546
Query: 364 GGVATAFASRDVLGNVLSGLSMQF-SKPFSLGDTIKAGSVEGQVVEMGLTTTTLLSAEKF 422
VA AF N+ + F P+ +GD V V EM L TT L
Sbjct: 547 QLVALAFIIGSTCKNLFESIVFVFVMHPYDVGDRCVVDGVAMLVEEMNLLTTVFLKLNNE 606
Query: 423 PVIVPNSMFSSQVIVNKSRAP 443
V PN++ +++ I N R+P
Sbjct: 607 KVYYPNAVLATKPISNYFRSP 627
>sp|Q9SYM1|MSL6_ARATH Mechanosensitive ion channel protein 6 OS=Arabidopsis thaliana
GN=MSL6 PE=1 SV=1
Length = 856
Score = 38.1 bits (87), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 390 PFSLGDTIKAGSVEGQVVEMGLTTTTLLSAEKFPVIVPNSMFSSQVIVNKSRAP 443
PF +GD + V+ V EM + TT L + V+ PNS+ ++ I N R+P
Sbjct: 673 PFDVGDRCEIDGVQMVVEEMNILTTVFLRFDNQKVVYPNSLLWTKSIGNYYRSP 726
>sp|Q84M97|MSL9_ARATH Mechanosensitive ion channel protein 9 OS=Arabidopsis thaliana
GN=MSL9 PE=2 SV=1
Length = 742
Score = 37.0 bits (84), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 56/142 (39%), Gaps = 3/142 (2%)
Query: 304 RWKTNVFT-RAMASQSIAGLDREKMLALDRISSVGLFVIGLMALAEACGVAVQSILTVGG 362
W NV+T R S+ + + LD++ + L VI + +A +L V
Sbjct: 495 EWVVNVYTSRKTIGHSLND-TKTAVKQLDKLITGILTVITFIVWMVLLDIASTKLLLVFS 553
Query: 363 IGGVATAFASRDVLGNVLSGLSMQF-SKPFSLGDTIKAGSVEGQVVEMGLTTTTLLSAEK 421
+ AF N+ F P+ +GD V V E+ L TT L +
Sbjct: 554 SQFLGLAFMIGSTCKNIFESFMFVFVMHPYDVGDRCVVDGVMLLVEEIDLLTTVFLKIDN 613
Query: 422 FPVIVPNSMFSSQVIVNKSRAP 443
V PNS+ S+ I N R+P
Sbjct: 614 EKVFYPNSVLISKPISNFYRSP 635
>sp|P0DKS1|MSCS_WIGBR Small-conductance mechanosensitive channel OS=Wigglesworthia
glossinidia brevipalpis GN=mscS PE=3 SV=1
Length = 280
Score = 35.8 bits (81), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 4/134 (2%)
Query: 351 GVAVQSILTVGGIGGVATAFASRDVLGNVLSGLSMQFSKPFSLGDTIKAGSVEGQVVEMG 410
G+ SI+ V G G+A A + L N +G+ + + F GD + V+G++ +
Sbjct: 87 GIQTTSIIAVIGAAGIAIGLALQGSLSNFAAGVLLVTLRYFRTGDYVNLCGVKGKIKTVQ 146
Query: 411 LTTTTLLSAEKFPVIVPNSMFSSQVIVNKSRAPWRALVIRIPMQ-IDDLDKVPQISDDVK 469
+ T + + + +I+PN+ S I+N S R + + I + D+ V +I DV
Sbjct: 147 IFCTKIKTKDGKIIIIPNNKIISSNIINYSEELHRLMEVIISTEYTSDIKNVKEIIIDV- 205
Query: 470 SMLRSNTKVFLGKE 483
L+ T++ K+
Sbjct: 206 --LKKETRIVKEKK 217
>sp|Q0V8H6|MOV10_BOVIN Putative helicase MOV-10 OS=Bos taurus GN=MOV10 PE=2 SV=1
Length = 1003
Score = 32.3 bits (72), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 442 APWRALVIRIPMQIDDLDKVPQISDDVKSMLRSNTKVFLGKEAPYCFLSQIES--SFAEL 499
+P+R V +I I LDK + DD+K + + + F G+E +S + S SF +L
Sbjct: 831 SPYRKQVEKIRYCITKLDKQLRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQL 890
Query: 500 NVGCNL 505
++ NL
Sbjct: 891 DLDFNL 896
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.134 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 175,664,390
Number of Sequences: 539616
Number of extensions: 6960516
Number of successful extensions: 19799
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 19753
Number of HSP's gapped (non-prelim): 48
length of query: 525
length of database: 191,569,459
effective HSP length: 122
effective length of query: 403
effective length of database: 125,736,307
effective search space: 50671731721
effective search space used: 50671731721
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)