Query 009793
Match_columns 525
No_of_seqs 214 out of 2600
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 13:07:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009793.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009793hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2exr_A Cytokinin dehydrogenase 100.0 2.7E-65 9.3E-70 548.7 46.7 472 43-524 36-522 (524)
2 1w1o_A Cytokinin dehydrogenase 100.0 2.8E-64 9.4E-69 543.6 39.8 486 35-523 35-534 (534)
3 3pm9_A Putative oxidoreductase 100.0 1.2E-63 4.1E-68 528.6 20.9 426 36-521 19-476 (476)
4 4bby_A Alkyldihydroxyacetoneph 100.0 3.6E-57 1.2E-61 498.0 34.5 441 46-521 174-658 (658)
5 2uuu_A Alkyldihydroxyacetoneph 100.0 2.9E-55 1E-59 474.4 30.6 444 36-521 96-584 (584)
6 1e8g_A Vanillyl-alcohol oxidas 100.0 6.3E-54 2.2E-58 464.4 30.8 445 36-522 26-548 (560)
7 1wvf_A 4-cresol dehydrogenase 100.0 2.1E-53 7.2E-58 457.3 27.9 446 36-523 22-515 (520)
8 1f0x_A DLDH, D-lactate dehydro 100.0 3.3E-51 1.1E-55 439.8 18.4 427 36-524 14-563 (571)
9 3tsh_A Pollen allergen PHL P 4 100.0 4.8E-39 1.6E-43 344.3 35.9 199 61-268 45-250 (500)
10 2bvf_A 6-hydroxy-D-nicotine ox 100.0 1.5E-38 5E-43 337.0 38.1 206 42-256 11-218 (459)
11 3rja_A Carbohydrate oxidase; p 100.0 1.6E-38 5.3E-43 336.7 33.0 211 49-267 17-233 (473)
12 3fw9_A Reticuline oxidase; BI- 100.0 1.2E-37 4E-42 330.6 30.8 200 59-268 36-242 (495)
13 3vte_A Tetrahydrocannabinolic 100.0 2.2E-37 7.4E-42 329.3 32.8 201 59-269 44-251 (518)
14 2vfr_A Xylitol oxidase, aldito 100.0 2E-38 6.7E-43 332.7 20.2 206 58-283 10-218 (422)
15 3pop_A GILR oxidase; FAD bindi 100.0 6.6E-37 2.3E-41 325.6 28.4 205 42-255 7-234 (501)
16 1zr6_A Glucooligosaccharide ox 100.0 5.2E-36 1.8E-40 320.2 34.7 195 51-254 25-222 (503)
17 4feh_A Oxidoreductase DPRE1; a 100.0 1.1E-35 3.8E-40 314.7 34.3 202 56-265 31-237 (481)
18 2ipi_A Aclacinomycin oxidoredu 100.0 9.7E-36 3.3E-40 319.2 33.8 199 47-254 33-255 (521)
19 2y3s_A TAML; oxidoreductase; H 100.0 3.7E-35 1.3E-39 314.8 36.6 197 50-255 40-260 (530)
20 2wdx_A Putative hexose oxidase 100.0 1.3E-35 4.5E-40 318.0 31.5 201 46-255 33-258 (523)
21 3js8_A Cholesterol oxidase; ch 100.0 1.5E-30 5.2E-35 275.3 34.2 194 57-262 18-235 (540)
22 2i0k_A Oxidoreductase; MIX alp 100.0 1.2E-30 4.3E-35 281.7 30.2 200 51-262 18-239 (561)
23 1hsk_A UDP-N-acetylenolpyruvoy 100.0 1.1E-30 3.9E-35 263.3 -3.5 188 36-246 20-213 (326)
24 3tx1_A UDP-N-acetylenolpyruvoy 99.9 2E-27 6.9E-32 238.1 9.8 189 36-245 26-217 (322)
25 3i99_A UDP-N-acetylenolpyruvoy 99.9 2.2E-24 7.6E-29 218.1 11.2 165 65-245 27-199 (357)
26 1uxy_A MURB, uridine diphospho 99.9 4.4E-23 1.5E-27 208.1 14.8 165 65-246 11-184 (340)
27 2gqt_A UDP-N-acetylenolpyruvyl 99.9 5E-22 1.7E-26 193.6 7.6 160 54-244 11-173 (268)
28 2yvs_A Glycolate oxidase subun 99.8 1.6E-20 5.3E-25 177.9 9.2 119 133-256 2-127 (219)
29 1ffv_C CUTM, flavoprotein of c 98.2 9.1E-07 3.1E-11 87.1 5.6 153 69-243 5-177 (287)
30 2w3s_A Xanthine dehydrogenase; 97.4 4.8E-05 1.7E-09 79.4 2.1 151 71-242 179-345 (462)
31 1n62_C Carbon monoxide dehydro 97.3 8.6E-05 2.9E-09 72.9 3.4 152 69-242 5-176 (288)
32 3nvz_B Xanthine dehydrogenase/ 96.8 0.00078 2.7E-08 66.6 4.3 154 66-241 7-189 (305)
33 1t3q_C Quinoline 2-oxidoreduct 96.4 0.0028 9.6E-08 62.0 5.3 151 68-241 4-174 (288)
34 3hrd_C Nicotinate dehydrogenas 95.9 0.0036 1.2E-07 61.5 3.2 151 69-241 3-177 (296)
35 1rm6_B 4-hydroxybenzoyl-COA re 88.0 0.9 3.1E-05 44.8 7.0 100 69-178 6-117 (324)
36 3unc_A Xanthine dehydrogenase/ 67.4 10 0.00035 44.5 8.0 80 67-156 231-313 (1332)
37 3zyv_A AOH1; oxidoreductase, m 42.0 37 0.0013 39.9 7.1 78 70-157 241-321 (1335)
38 1xty_A PTH, peptidyl-tRNA hydr 30.8 50 0.0017 27.0 4.2 47 54-104 42-89 (120)
39 1rzw_A Protein AF2095(GR4); be 26.8 71 0.0024 26.3 4.4 44 58-105 40-84 (123)
40 1wn2_A Peptidyl-tRNA hydrolase 22.0 80 0.0027 25.9 3.9 38 65-104 52-90 (121)
41 3s8s_A Histone-lysine N-methyl 21.1 2.2E+02 0.0074 22.3 6.4 47 217-267 21-68 (110)
42 2dnh_A Bruno-like 5, RNA bindi 20.9 1.6E+02 0.0056 22.3 5.5 47 217-267 30-76 (105)
43 2ywk_A Putative RNA-binding pr 20.3 1.5E+02 0.0052 22.0 5.1 47 217-267 31-77 (95)
No 1
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=100.00 E-value=2.7e-65 Score=548.72 Aligned_cols=472 Identities=47% Similarity=0.875 Sum_probs=385.7
Q ss_pred cCceeecChhHHHHHhccccCcCCCCccEEEECCCHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCcCCCcEEEEcCC
Q 009793 43 IGARLHLDPAAIKSASSDYGNIFKENPVAVLYPSSTEDIVALVKAAYNSSVPFKIAAKGRGHSVRGQAMADGGVVVEMMA 122 (525)
Q Consensus 43 ~~~~v~~~~~~~~~~~~d~~~~~~~~p~~vv~P~~~~ev~~~v~~a~~~~~~~~v~~~g~G~~~~g~~~~~~gvvidl~~ 122 (525)
++++|.+|+.++..|++||+..+...|.+|++|+|++||+++|++|+ +++++||+|||+|||+.|++.+.+||+|||++
T Consensus 36 ~~~~v~~d~~~~~~~~~d~~~~~~~~P~~vv~P~s~eeV~~iv~~a~-~~~~~~v~~~GgGts~~g~~~~~~gvvidl~~ 114 (524)
T 2exr_A 36 IQGEILCGGAAADIAGRDFGGMNCVKPLAVVRPVGPEDIAGAVKAAL-RSDKLTVAARGNGHSINGQAMAEGGLVVDMST 114 (524)
T ss_dssp CSSEEECSHHHHHHHTCCTTCCCCCCCSEEEECSSHHHHHHHHHHHH-HSSSCCEEEESSSCCSSSTTCCTTSEEEEGGG
T ss_pred CCCeEEeCHHHHHHHhccccccccCCCCEEEecCCHHHHHHHHHHHH-hhcCceEEEECCCcCCCCcccCCCEEEEECcC
Confidence 58899999999999999998878899999999999999999999997 13899999999999999998877899999999
Q ss_pred ccCcCCCCeEEE---cC-C--cEEEEcCCccHHHHHHHHH-hCCCcccccCCCCceeEeeecCCCCCCCCccccCccccc
Q 009793 123 LKNYRNGNGITV---GS-G--FYADVAGEQLWIDVLNATL-EHGLAPASWTDYLYLTVGGTLSNAGISGQTFRYGPQISN 195 (525)
Q Consensus 123 mn~i~~~~~i~i---d~-~--~~v~v~aGv~~~~l~~~l~-~~gl~p~~~~~~~~~tvGG~~~~~g~g~~~~~yG~~~d~ 195 (525)
||+| .++. +. + .+++||||++|.++++++. ++|+.|+++++.+.+||||+++++|.|+.+.+||.++|+
T Consensus 115 m~~i----~i~~~~~~~~~~~~~v~v~aGv~~~~l~~~~l~~~Gl~~~~~~s~~~~tiGG~va~ng~G~~~~~yG~~~d~ 190 (524)
T 2exr_A 115 TAEN----HFEVGYLSGGDATAFVDVSGGALWEDVLKRCVSEYGLAPRSWTDYLGLTVGGTLSNAGVSGQAFRYGPQTSN 190 (524)
T ss_dssp GTTS----CEEEEECCSSSSSEEEEEETTCBHHHHHHHHHHHHSEECSCCCSCCSSBHHHHHTTCCCCTTHHHHCCGGGS
T ss_pred CCCc----EEeecccCCCCCceEEEEeCCcCHHHHHHHHHHHcCCCCCCCCcCCceeecccCCCCCCcccccccCcHhhh
Confidence 9974 3555 21 4 7999999999999866555 999998888887889999999999999999999999999
Q ss_pred EEEEEEEecCccEEEecCCCChhHHHHHhcCCCcceEEEEeEEEEEecCCceEEEEEEeCChhhHHHHHHHHHHccCcCC
Q 009793 196 VYELDVVTGKGELMTCSALKNSELFYAALGGLGQFGIITRARIALEPAPKRVKWVRMLYSDFSSFSRDQEYLISMNGRRQ 275 (525)
Q Consensus 196 v~~~~vV~~dG~~~~~~~~~~~dl~~~~~Gs~G~lGiit~~tl~l~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (525)
|++++||++||++++++..+|+||+++++||+|+|||||+++||++|.|+...++.+.|++++++.+++..+++.. ..
T Consensus 191 V~~l~vV~~dG~v~~~~~~~~~dL~~~~~Gs~GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~~~~~~~~l~~~~--~~ 268 (524)
T 2exr_A 191 VTELDVVTGNGDVVTCSEIENSELFFSVLGGLGQFGIITRARVLLQPAPDMVRWIRVVYTEFDEFTQDAEWLVSQK--NE 268 (524)
T ss_dssp EEEEEEEETTSCEEEEESSSSHHHHHHHTTCTTSSEEEEEEEEEEEECCSEEEEEEEEESCHHHHHHHHHHHHTSC--TT
T ss_pred EEEEEEEecCCeEEEECCCCChhHHhHhhcCCCccEEEEEEEEEEEEcCCeeEEEEEEeCCHHHHHHHHHHHHHcC--Cc
Confidence 9999999999999999998899999999999999999999999999999998889999999999999999888752 34
Q ss_pred ccccccccceeeecC-CccCCCcccCCCCCCCcccccccc-cccEEEEEEEEeee-CCCCchhhHHHHHHHHhhccCCCC
Q 009793 276 KQALDYLEGTLIMDQ-GSLDNWRSSFFPPSDHPKIISQVK-THAIIYCLEVAKYY-DDHTQSTLHKELQTLFKGLSYLPG 352 (525)
Q Consensus 276 ~~~~e~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~e~~~~~-~~~~~~~~~~~~~~l~~~~~~~~g 352 (525)
+.+|++|.+++... ...+.|...++..........+|. +..+++++|+..+| ++.+.++++++++++.+.+...++
T Consensus 269 -~~~e~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~llve~~~~~~~g~~~~~v~~~~~~~~~~l~~~~~ 347 (524)
T 2exr_A 269 -SSFDYVEGFVFVNGADPVNGWPTVPLHPDHEFDPTRLPQSCGSVLYCLELGLHYRDSDSNSTIDKRVERLIGRLRFNEG 347 (524)
T ss_dssp -SSCSEEEEEEEESSCCTTTSGGGSCSSTTSCCCGGGSCTTCCSEEEEEEEEEEECTTSCHHHHHHHHHHHHTTCCCCTT
T ss_pred -chhHhhchhhhhcchhhhhhhhhcccccccccchhcCCcccccEEEEEEEEeecCCCCCHHHHHHHHHHHHHHHHhCCC
Confidence 68899999987755 333333322221111111234542 35688899987767 666788899999999999987666
Q ss_pred ccccccchHHHHHHhhhhhhHHHhhccCccCCccceeeccccccHHHHHhHHHHHhhhhcCCCCccEEEEeCCCCCCCCC
Q 009793 353 FMFEKDVSYVEFLNRVRSGELKLESQGLWEVPHPWLNLFLPKSRISDFNKGVFRDIVLKRNITTGPVLVYPMNRNKWDDR 432 (525)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lW~~r~~~~d~~vP~~~l~~~~~~i~~~l~~~~~~~~~~i~~~~~~~~~~~~~ 432 (525)
..+..+..+..|.+.............+|..++++.|++||+++++++++.+.+.. .+++|.|+++++++....+..+
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~W~~R~~~~~a~~~~~~Dv~VP~s~l~~~~~~v~~~~--~gdgn~h~~i~~~~~~~~~~~r 425 (524)
T 2exr_A 348 LRFEVDLPYVDFLLRVKRSEEIAKENGTWETPHPWLNLFVSKRDIGDFNRTVFKEL--VKNGVNGPMLVYPLLRSRWDDR 425 (524)
T ss_dssp CEEEEEEEHHHHHTTTHHHHHHHHHTTCSSSCCCCEEEEEEHHHHHHHHHHCCCCC--TTTCCSSCEEEEEEEGGGSCTT
T ss_pred eEeecccchhhhhhhhhhHHHHhhhhcccccCCCeeEEEECHHHHHHHHHHHHHHH--hCCCCcceEEEEeCCchHHHhH
Confidence 54444445555543332112233446677777778899999999999998874333 2478889999999888788778
Q ss_pred ccccccCC-cEEEEEccccCCCh----hhHHHHHHHHHHHHHHHHHcCCceeecCCCCCChHHHHHhhhhhHHHHHHhhh
Q 009793 433 MSAVIPDE-DVFYTVGFLHSSGF----DEWEAFDDQNKEILKFCENAGIKVKQYLPYHRNKEEWIKHFGSKWNTFAQRKA 507 (525)
Q Consensus 433 ~~~~~~dg-~~h~~i~~~~~~~~----~~~~~~~~~~~~l~~~~~~~G~g~~~yl~~~~~~~~w~~~~G~~~~~~~~iK~ 507 (525)
.+.+.++| ++++.+.++....+ +..+++.+.++++.+.+...|.++++|+..+.++.+|+++||+.|+.|+++|+
T Consensus 426 ~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~yl~~~~~~~~w~~~~G~~~~~m~~iK~ 505 (524)
T 2exr_A 426 TSVVIPEEGEIFYIVALLRFVPPCAKVSSVEKMVAQNQEIVHWCVKNGIDYKLYLPHYKSQEEWIRHFGNRWSRFVDRKA 505 (524)
T ss_dssp SSCCCCSSCSEEEEEEECCCCCTTSCHHHHHHHHHHHHHHHHHHHHTTCCEEESSCCCCSHHHHHHHHGGGHHHHHHHHH
T ss_pred HHhhCCCCccEEEEEEEeccCCCcccchHHHHHHHHHHHHHHHHHHcCCccEEeecCCCCHHHHHHHhhhHHHHHHHHHh
Confidence 88788774 56777665343322 45666777888999988888888999999999999999999999999999999
Q ss_pred cCCCcCcCCCCcccccc
Q 009793 508 HFDPKMILSPGQRIFNN 524 (525)
Q Consensus 508 ~~DP~gilNPGk~~~~~ 524 (525)
+|||+|||||||.||+|
T Consensus 506 ~~DP~~iLnPG~~if~~ 522 (524)
T 2exr_A 506 MFDPMAILSPGQKIFNR 522 (524)
T ss_dssp HHCTTCCBCGGGCSSCC
T ss_pred hcCchhhcCCCCccCCC
Confidence 99999999999999986
No 2
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=100.00 E-value=2.8e-64 Score=543.65 Aligned_cols=486 Identities=51% Similarity=0.940 Sum_probs=377.2
Q ss_pred cccccccccCceeecChhHHHHHhccccCcCCCCccEEEECCCHHHHHHHHHHHHcCCC-CcEEEEecCCCCCCCCCcCC
Q 009793 35 PHKLLTLDIGARLHLDPAAIKSASSDYGNIFKENPVAVLYPSSTEDIVALVKAAYNSSV-PFKIAAKGRGHSVRGQAMAD 113 (525)
Q Consensus 35 ~~~l~~~~~~~~v~~~~~~~~~~~~d~~~~~~~~p~~vv~P~~~~ev~~~v~~a~~~~~-~~~v~~~g~G~~~~g~~~~~ 113 (525)
.++|+++.++++|.+|+..+..|++||+..+...|.+|++|+|++||+++|++|++.++ ++||+|||+|||+.|++.+.
T Consensus 35 ~~~l~~~~~~~~v~~~~~~~~~~~~d~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~~~v~~~G~G~~~~g~~~~~ 114 (534)
T 1w1o_A 35 PASLAALALDGKLRTDSNATAAASTDFGNITSALPAAVLYPSSTGDLVALLSAANSTPGWPYTIAFRGRGHSLMGQAFAP 114 (534)
T ss_dssp -----CTTTTTCEECSHHHHHHTSCCTTCSCCCCCSEEECCSSHHHHHHHHHHHHHCTTCCCCEEEESSCCCSSSTTCCT
T ss_pred HHHHHhcCCCceEecCHHHHHHHhccccccccCCCCEEEecCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCcCCC
Confidence 46788878899999999999999999988889999999999999999999999972226 99999999999999998877
Q ss_pred CcEEEEcCCccCcCCCCeEEEcC-CcEEEEcCCccHHHHHHHHHhCCCcccccCCCCceeEeeecCCCCCCCCccccCcc
Q 009793 114 GGVVVEMMALKNYRNGNGITVGS-GFYADVAGEQLWIDVLNATLEHGLAPASWTDYLYLTVGGTLSNAGISGQTFRYGPQ 192 (525)
Q Consensus 114 ~gvvidl~~mn~i~~~~~i~id~-~~~v~v~aGv~~~~l~~~l~~~gl~p~~~~~~~~~tvGG~~~~~g~g~~~~~yG~~ 192 (525)
+|++|||++||+|.+...+++|+ +.+++||||++|.+|++++.++|++|+++++...+||||+++++|.|..+.+||.+
T Consensus 115 ~gvvi~l~~m~~i~~~~~~~~d~~~~~v~v~aGv~~~~l~~~~~~~Gl~~~~~~~~~~~tvGG~v~~~g~g~~~~~yG~~ 194 (534)
T 1w1o_A 115 GGVVVNMASLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARGVAPRSWTDYLYLTVGGTLSNAGISGQAFRHGPQ 194 (534)
T ss_dssp TSEEEEGGGGGCSSSSCSEEECTTSSEEEEETTCBHHHHHHHHHTTTEEESCCCSSCCSBHHHHHTTCCCSTTHHHHCCG
T ss_pred CeEEEECccccccccCccEEEcCCCCEEEECCCcCHHHHHHHHHHCCCcccCCCCCCCEEeceeccCCCccccccccccH
Confidence 89999999999731111288988 88999999999999999999999999998888889999999999999999999999
Q ss_pred cccEEEEEEEecCccEEEecCCCChhHHHHHhcCCCcceEEEEeEEEEEecCCceEEEEEEeCChhhHHHHHHHHHHccC
Q 009793 193 ISNVYELDVVTGKGELMTCSALKNSELFYAALGGLGQFGIITRARIALEPAPKRVKWVRMLYSDFSSFSRDQEYLISMNG 272 (525)
Q Consensus 193 ~d~v~~~~vV~~dG~~~~~~~~~~~dl~~~~~Gs~G~lGiit~~tl~l~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (525)
+|+|+++|||++||++++++..+|+||||+++||+|+|||||+++||++|.|+...++.+.|.+++++.+++..+.+.
T Consensus 195 ~d~v~~~evV~~dG~v~~~~~~~~~dL~~~~rGs~G~~GIVt~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 272 (534)
T 1w1o_A 195 ISNVLEMDVITGHGEMVTCSKQLNADLFDAVLGGLGQFGVITRARIAVEPAPARARWVRFVYTDFAAFSADQERLTAP-- 272 (534)
T ss_dssp GGSEEEEEEEETTSCEEEEESSSSHHHHHHHTTCTTCSEEEEEEEEEEEECCSEEEEEEEEESCHHHHHHHHHHHHCB--
T ss_pred hhhEEEEEEEeCCccEEEECCCCChhhHhhhcCCCCCcEEEEEEEEEEEECCcceEEEEEEeCCHHHHHHHHHHHHhc--
Confidence 999999999999999999999899999999999999999999999999999998888889999999998888877654
Q ss_pred cC-----CccccccccceeeecCCccCCCccc-CCCCCCCccccccccc--ccEEEEEEEEeeeCCCCc--hhhHHHHHH
Q 009793 273 RR-----QKQALDYLEGTLIMDQGSLDNWRSS-FFPPSDHPKIISQVKT--HAIIYCLEVAKYYDDHTQ--STLHKELQT 342 (525)
Q Consensus 273 ~~-----~~~~~e~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~--~~~~~~~e~~~~~~~~~~--~~~~~~~~~ 342 (525)
+. .++.+|++|...+........+... ++..........++.. ..+++++|+..+|++.+. +++++.++.
T Consensus 273 ~~~~~~~~~~~~e~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ie~~~~~~g~~~~~~~~~~~~~~ 352 (534)
T 1w1o_A 273 RPGGGGASFGPMSYVEGSVFVNQSLATDLANTGFFTDADVARIVALAGERNATTVYSIEATLNYDNATAAAAAVDQELAS 352 (534)
T ss_dssp C------CBCSCSEEEEEEEEGGGHHHHHHTTSSSCHHHHHHHHHHHHHTTCSEEEEEEEEEEC-------CHHHHHHHH
T ss_pred ccccccccccchhHhhhhhhcccccccccccccccCccccccccccccccccceEEEEEEEEecCCCccchhhhHHHHHH
Confidence 23 5678999998866432111111000 0000000000123322 567888998766655455 677888999
Q ss_pred HHhhccCCCCccccccchHHHHHHhhhhhhHHHhhccCccCCccceeeccccccHHHHHhHHHHHhhhhcCCCCccEEEE
Q 009793 343 LFKGLSYLPGFMFEKDVSYVEFLNRVRSGELKLESQGLWEVPHPWLNLFLPKSRISDFNKGVFRDIVLKRNITTGPVLVY 422 (525)
Q Consensus 343 l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~lW~~r~~~~d~~vP~~~l~~~~~~i~~~l~~~~~~~~~~i~~~ 422 (525)
+++.+...++.....+.+|..+.+.............+|..++++.|++||+++++++++++.+.+.+... ..+++.++
T Consensus 353 ~~~~l~~~~~~~~~~~~~y~~~~~~~~~~~w~~r~~~~~~~~~~~~d~~vP~s~l~~~~~~~~~~l~~~~~-~~~~~~~~ 431 (534)
T 1w1o_A 353 VLGTLSYVEGFAFQRDVAYAAFLDRVHGEEVALNKLGLWRVPHPWLNMFVPRSRIADFDRGVFKGILQGTD-IVGPLIVY 431 (534)
T ss_dssp HHTTCCCCTTCEEEEEEEHHHHHTHHHHHHHHHHHTTCSSSCCCCEEEEEEGGGHHHHHHHHTTTTTTTSC-CCSCEEEE
T ss_pred HHHhhcccCCcceeccchHHHHhhhhhhhHHHHhhccccccCCccccEEecHHHHHhHHHHHHHHHhhccC-CcccEEEe
Confidence 99988654543323455555554333111112234567777766779999999999999887544665422 12567777
Q ss_pred eCCCCCCCCCccccccCCcEEEEEccccCC-ChhhHHHHHHHHHHHHHHHHHcCCceeecCCCCCChHHHHHhhhh-hHH
Q 009793 423 PMNRNKWDDRMSAVIPDEDVFYTVGFLHSS-GFDEWEAFDDQNKEILKFCENAGIKVKQYLPYHRNKEEWIKHFGS-KWN 500 (525)
Q Consensus 423 ~~~~~~~~~~~~~~~~dg~~h~~i~~~~~~-~~~~~~~~~~~~~~l~~~~~~~G~g~~~yl~~~~~~~~w~~~~G~-~~~ 500 (525)
++.++.|..+.+.+++||++|+++.+.... +++..++..+.++++.+.+.++|.++..|+..+...++|+++||+ +|+
T Consensus 432 ~~~gh~~~~~~s~v~~dgn~h~~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~yl~~~~~~~~w~~~~G~~~~~ 511 (534)
T 1w1o_A 432 PLNKSMWDDGMSAATPSEDVFYAVSLLFSSVAPNDLARLQEQNRRILRFCDLAGIQYKTYLARHTDRSDWVRHFGAAKWN 511 (534)
T ss_dssp EEEGGGSCTTSSCCCCSSSEEEEEEECCCC---CHHHHHHHHHHHHHHHHHHTTCCCEESSCCCSSHHHHHHHHCHHHHH
T ss_pred ecccccccccccccCCCccEEEEEEEecCCCCcchHHHHHHHHHHHHHHHHHhCCCcEEECCCCCChHHHHHHhCHHHHH
Confidence 777766667777779999999999873332 334556667888999999999888889999887788899989997 999
Q ss_pred HHHHhhhcCCCcCcCCCCccccc
Q 009793 501 TFAQRKAHFDPKMILSPGQRIFN 523 (525)
Q Consensus 501 ~~~~iK~~~DP~gilNPGk~~~~ 523 (525)
+|++||++|||+|||||||.||+
T Consensus 512 ~l~~iK~~~DP~~ilnpgk~I~~ 534 (534)
T 1w1o_A 512 RFVEMKNKYDPKRLLSPGQDIFN 534 (534)
T ss_dssp HHHHHHHHHCTTCCBCGGGCSCC
T ss_pred HHHHHHHhcCchhhcCCCCcCCC
Confidence 99999999999999999998875
No 3
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=100.00 E-value=1.2e-63 Score=528.60 Aligned_cols=426 Identities=16% Similarity=0.193 Sum_probs=340.4
Q ss_pred ccccccccCceeecChhHHHHHhccccCcCCCCccEEEECCCHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCcCC-C
Q 009793 36 HKLLTLDIGARLHLDPAAIKSASSDYGNIFKENPVAVLYPSSTEDIVALVKAAYNSSVPFKIAAKGRGHSVRGQAMAD-G 114 (525)
Q Consensus 36 ~~l~~~~~~~~v~~~~~~~~~~~~d~~~~~~~~p~~vv~P~~~~ev~~~v~~a~~~~~~~~v~~~g~G~~~~g~~~~~-~ 114 (525)
.+|+++..++.|.++++.+..|++||+..+...|.+||+|+|++||+++|++|+ ++++|++|||+|||+.|++.+. +
T Consensus 19 ~~L~~~lg~~~v~~~~~~~~~~~~d~~~~~~~~p~~vv~P~s~eeV~~~v~~a~--~~~~pv~~~GgGt~~~g~~~~~~g 96 (476)
T 3pm9_A 19 ARFTAIVGDKHALTDPLELEAYITEERNLYRGHSPLVLRPGSTEEVVAICKLAN--EARVALVPQGGNTGLVGGQTPHNG 96 (476)
T ss_dssp HHHHHHHCGGGEECSHHHHHHHHBCTTCCCBCCCSCEECCCSHHHHHHHHHHHH--HHTCCEEEESSSCCSSSTTCCCSS
T ss_pred HHHHHhcCCCcEecCHHHHHHHhcccccccCCCCCEEEecCCHHHHHHHHHHHH--HcCCeEEEEeCCCCCCCCccCCCC
Confidence 567777777899999999999999998778899999999999999999999998 8999999999999999998874 7
Q ss_pred cEEEEcCCccCcCCCCeEEEcC-CcEEEEcCCccHHHHHHHHHhCCCc-ccccCCCCceeEeeecCCCCCCCCccccCcc
Q 009793 115 GVVVEMMALKNYRNGNGITVGS-GFYADVAGEQLWIDVLNATLEHGLA-PASWTDYLYLTVGGTLSNAGISGQTFRYGPQ 192 (525)
Q Consensus 115 gvvidl~~mn~i~~~~~i~id~-~~~v~v~aGv~~~~l~~~l~~~gl~-p~~~~~~~~~tvGG~~~~~g~g~~~~~yG~~ 192 (525)
|++|||++||+ ++++|+ +.+++||||++|.+|++++.++|++ |+++.+...+||||+++++++|..+.+||.+
T Consensus 97 gvvIdl~~m~~-----i~~id~~~~~v~V~aGv~~~~l~~~l~~~Gl~~~~~~~s~~~~tvGG~ia~nagG~~~~~yG~~ 171 (476)
T 3pm9_A 97 EVVISLKRMDK-----IREIDTSSNTITVEAGAILQRVQEKAAEVDRLFPLSLGAQGSCTIGGNLSTNAGGTAALAYGLA 171 (476)
T ss_dssp CEEEECTTCCC-----EEEEETTTTEEEEETTCBHHHHHHHHHHTTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCH
T ss_pred cEEEEeeCCCc-----eEEEcCCCCeEEECCCcCHHHHHHHHHHhCCccCCCCCCCCcEEEccccCCCCCCCcccccCcH
Confidence 99999999996 678998 8999999999999999999999985 9999988899999999988889999999999
Q ss_pred cccEEEEEEEecCccEEEecC-----CCChhHHHHHhcCCCcceEEEEeEEEEEecCCceEEEEEEeCChhhHHHHHHHH
Q 009793 193 ISNVYELDVVTGKGELMTCSA-----LKNSELFYAALGGLGQFGIITRARIALEPAPKRVKWVRMLYSDFSSFSRDQEYL 267 (525)
Q Consensus 193 ~d~v~~~~vV~~dG~~~~~~~-----~~~~dl~~~~~Gs~G~lGiit~~tl~l~p~p~~~~~~~~~~~~~~~~~~~~~~~ 267 (525)
+|+|+++++|++||++++++. ..++||+++++||+|+|||||+++||++|.|+....+.+.|++++++.+++..+
T Consensus 172 ~d~V~~levV~~dG~v~~~~~~~~k~~~g~dl~~l~~Gs~GtlGIIt~~tl~l~p~p~~~~~~~~~~~~~~~a~~~~~~~ 251 (476)
T 3pm9_A 172 RDMALGVEVVLADGRVMNLLSKLKKDNTGYDLRDLFIGAEGTLGIITAATLKLFPKPRAVETAFVGLQSPDDALKLLGIA 251 (476)
T ss_dssp HHHEEEEEEECTTSCEEECCCCCSCCCSSCCCHHHHTTSTTSSCEEEEEEEECEECCSEEEEEEEEESCHHHHHHHHHHH
T ss_pred HHheeEEEEEccCCeEEEcCCcccCCCCCcCHHHHhccCCCCcEEEEEEEEEEeecCceeEEEEEEcCCHHHHHHHHHHH
Confidence 999999999999999999864 247899999999999999999999999999999888999999999999999988
Q ss_pred HHccCcCCccccccccceeeecCCccCCCcccCCCCCCCcccccccccccEEEEEEEEeeeCCCCchhhHHHHHHHHhhc
Q 009793 268 ISMNGRRQKQALDYLEGTLIMDQGSLDNWRSSFFPPSDHPKIISQVKTHAIIYCLEVAKYYDDHTQSTLHKELQTLFKGL 347 (525)
Q Consensus 268 ~~~~~~~~~~~~e~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~l~~~~ 347 (525)
.+.. +..|+++|+||...+- .+.. +. .. ..+++.+.++++++|+.+ +.++++++++++++.+
T Consensus 252 ~~~~-g~~p~a~El~d~~~~~---~~~~-----~~-~~---~~~~~~~~~~~llve~~g-----~~~~~~~~~~~~~~~~ 313 (476)
T 3pm9_A 252 QGEA-AGNLTSFELIAETPLD---FSVR-----HA-NN---RDPLEARYPWYVLIELSS-----PRDDARAALESILERG 313 (476)
T ss_dssp HHHH-GGGEEEEEEEEHHHHH---HHHH-----HT-TC---CCCSSSCCSEEEEEEEEE-----SSSCHHHHHHHHHHHH
T ss_pred HHhc-CCCceEEEecCHHHHH---HHHh-----cc-CC---CCCCCccCCeEEEEEEcc-----CcHHHHHHHHHHHHHH
Confidence 7632 3688899999886431 1110 00 00 012333346889999764 3356777788887776
Q ss_pred cCCCCccccccchHHHHHHhhhhhhHHHhhccCccCCc------------cceeeccccccHHHHHhHHHHHhhhhcCCC
Q 009793 348 SYLPGFMFEKDVSYVEFLNRVRSGELKLESQGLWEVPH------------PWLNLFLPKSRISDFNKGVFRDIVLKRNIT 415 (525)
Q Consensus 348 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~lW~~r~------------~~~d~~vP~~~l~~~~~~i~~~l~~~~~~~ 415 (525)
...+... +. ..+.++.++..+|+.|+ ...|++||+++++++++++ +++.++....
T Consensus 314 ~~~g~~~---~~---------~~a~~~~~~~~lW~~R~~~~~~~~~~g~~~~~Dv~vP~~~l~~~~~~~-~~~~~~~~~~ 380 (476)
T 3pm9_A 314 FEDGIVV---DA---------AIANSVQQQQAFWKLREEISPAQKPEGGSIKHDISVPVAAVPQFIEQA-NAAVVALIPG 380 (476)
T ss_dssp HHTTCCC---EE---------EECCSHHHHHHHHHHHHTHHHHTGGGCCEECCEEECCGGGHHHHHHHH-HHHHHHHSTT
T ss_pred HhcCCCc---ce---------EEeCCHHHHHHHHHHHHHHHHHHhhcCCceeEEEEeeHHHHHHHHHHH-HHHHHHhcCC
Confidence 5433211 10 01223334444555443 2359999999999999998 6777652111
Q ss_pred CccEEEEeCCCCCCCCCccccccCCcEEEEEccccC-CChh-hHHHHHHHHHHHHHHHH--------HcCCc--eeecCC
Q 009793 416 TGPVLVYPMNRNKWDDRMSAVIPDEDVFYTVGFLHS-SGFD-EWEAFDDQNKEILKFCE--------NAGIK--VKQYLP 483 (525)
Q Consensus 416 ~~~i~~~~~~~~~~~~~~~~~~~dg~~h~~i~~~~~-~~~~-~~~~~~~~~~~l~~~~~--------~~G~g--~~~yl~ 483 (525)
. .+ ...+|+||||+|+++.+ +. .+++ ..+++.+..+++++.+. +||+| +++|+.
T Consensus 381 ~-~~------------~~~gH~gdGnlH~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~gGsis~EHGiG~~k~~~l~ 446 (476)
T 3pm9_A 381 A-RP------------VPFGHLGDGNIHYNVSQ-PVGADKAEFLARWHDVSQVVFEVVLRLGGSISAEHGIGVMKRDELA 446 (476)
T ss_dssp C-EE------------EEEEEGGGTEEEEEEEC-CTTCCHHHHHTTHHHHHHHHHHHHHHTTCBSCSSSCCTTTTHHHHH
T ss_pred C-eE------------EEEEEeCCCceEEEEec-CCcCChHHHHHHHHHHHHHHHHHHHHcCCEEEEcccCchhHHHHHH
Confidence 1 11 22368999999999976 43 2333 35567778888888886 45777 888887
Q ss_pred CCCChHHHHHhhhhhHHHHHHhhhcCCCcCcCCCCccc
Q 009793 484 YHRNKEEWIKHFGSKWNTFAQRKAHFDPKMILSPGQRI 521 (525)
Q Consensus 484 ~~~~~~~w~~~~G~~~~~~~~iK~~~DP~gilNPGk~~ 521 (525)
.++++. .++.|++||+.|||+|||||||+|
T Consensus 447 ~~~~~~--------~~~~m~~iK~~~DP~~ilNPGki~ 476 (476)
T 3pm9_A 447 EVKDKT--------AIELMRSIKALLDPHGIMNPGKVV 476 (476)
T ss_dssp HHSCHH--------HHHHHHHHHHHHCTTSCBSTTSCC
T ss_pred HhcCHH--------HHHHHHHHHHHhCcccCCCCCCcC
Confidence 777777 899999999999999999999986
No 4
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=100.00 E-value=3.6e-57 Score=498.03 Aligned_cols=441 Identities=16% Similarity=0.161 Sum_probs=312.2
Q ss_pred eeecChhHHHHHhcc---------ccCcCCCCccEEEECCCHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCcC----
Q 009793 46 RLHLDPAAIKSASSD---------YGNIFKENPVAVLYPSSTEDIVALVKAAYNSSVPFKIAAKGRGHSVRGQAMA---- 112 (525)
Q Consensus 46 ~v~~~~~~~~~~~~d---------~~~~~~~~p~~vv~P~~~~ev~~~v~~a~~~~~~~~v~~~g~G~~~~g~~~~---- 112 (525)
.+.++.+++..++.+ |.+.|+..|.+||+|+|+|||+++|++|+ ++++||+|||||||+.|++.+
T Consensus 174 ~~~~~~~~r~~h~~g~s~~d~~~~~~g~~~~~P~aVV~P~s~eeV~~iv~~A~--~~~ipVvprGgGTsl~GG~~~~~~~ 251 (658)
T 4bby_A 174 SYSQEADDRVFRAHGHCLHEIFLLREGMFERIPDIVLWPTCHDDVVKIVNLAC--KYNLCIIPIGGGTSVSYGLMCPADE 251 (658)
T ss_dssp EEECCHHHHHHTSCCSCHHHHHHHHSSCCSCCCSEEEECCSHHHHHHHHHHHH--HTTCEEEEESSCCCSSSTTCCCTTC
T ss_pred cccCchHHHhhhcCCCCHHHHHHHhCCcccCCcCEEEeeCCHHHHHHHHHHHH--HCCCeEEEECCCcCCCCCCCCCCCC
Confidence 466777777766543 45678999999999999999999999998 999999999999999987664
Q ss_pred -CCcEEEEcCCccCcCCCCeEEEcC-CcEEEEcCCccHHHHHHHHHhCCC-cccccCCCCceeEeeecCCCCCCCCcccc
Q 009793 113 -DGGVVVEMMALKNYRNGNGITVGS-GFYADVAGEQLWIDVLNATLEHGL-APASWTDYLYLTVGGTLSNAGISGQTFRY 189 (525)
Q Consensus 113 -~~gvvidl~~mn~i~~~~~i~id~-~~~v~v~aGv~~~~l~~~l~~~gl-~p~~~~~~~~~tvGG~~~~~g~g~~~~~y 189 (525)
.++|+|||++||+ ++++|+ +++++||||+++.+|+++|+++|+ +|+++++...+||||+++++++|..+.+|
T Consensus 252 ~~ggVvLDlsrMnr-----IleiD~~~~~atVeaGv~~~~L~~~L~~~Gl~lp~dP~S~~~aTIGG~iAtna~G~~s~rY 326 (658)
T 4bby_A 252 TRTIISLDTSQMNR-----ILWVDENNLTAHVEAGITGQELERQLKESGYCTGHEPDSLEFSTVGGWISTRASGMKKNIY 326 (658)
T ss_dssp CSCEEEEECTTCCC-----EEEEETTTTEEEEETTCBHHHHHHHHHHHTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHH
T ss_pred CCcEEEEECccCCC-----cEEEcCCCCEEEEecCchHHHHHHHHHHcCCccCCCCCCccccEEeehhhcCCCCCCccCc
Confidence 2569999999997 799999 999999999999999999999997 58899998999999999999999999999
Q ss_pred CcccccEEEEEEEecCccEEEecC----CCChhHHHHHhcCCCcceEEEEeEEEEEecCCceEEEEEEeCChhhHHHHHH
Q 009793 190 GPQISNVYELDVVTGKGELMTCSA----LKNSELFYAALGGLGQFGIITRARIALEPAPKRVKWVRMLYSDFSSFSRDQE 265 (525)
Q Consensus 190 G~~~d~v~~~~vV~~dG~~~~~~~----~~~~dl~~~~~Gs~G~lGiit~~tl~l~p~p~~~~~~~~~~~~~~~~~~~~~ 265 (525)
|.++|+|+++|||+|||++++.++ ..+|||+++++||+|||||||+++|||+|.|+...++.+.|++++++.+++.
T Consensus 327 G~~~d~VlgleVVlpdG~i~~~~~~~k~~aGyDL~~L~iGSEGTLGIITeatLrL~P~P~~~~~~~~~f~d~~~a~~av~ 406 (658)
T 4bby_A 327 GNIEDLVVHMKVVTPRGVIEKSCQGPRMSTGPDIHHFIMGSEGTLGVITEATIKIRPTPEYQKYGSVAFPNFEQGVACLR 406 (658)
T ss_dssp CCHHHHEEEEEEEETTEEEECSCCCSSCCSSSCTHHHHTTCTTSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHH
T ss_pred CCHHHheeeEEEEeCCCcccccccccccCCCcCHHHHhccCCCcCcceeeeeeeeccCCccccccccccCCchhhhhhHH
Confidence 999999999999999999998764 3578999999999999999999999999999999999999999999999999
Q ss_pred HHHHccCcCCccccccccceeeecC-CccC---CCcccCCCCCC----CcccccccccccEEEEEEEEeeeCCCCchhhH
Q 009793 266 YLISMNGRRQKQALDYLEGTLIMDQ-GSLD---NWRSSFFPPSD----HPKIISQVKTHAIIYCLEVAKYYDDHTQSTLH 337 (525)
Q Consensus 266 ~~~~~~~~~~~~~~e~~d~~~~~~~-~~~~---~~~~~~~~~~~----~~~~~~l~~~~~~~~~~e~~~~~~~~~~~~~~ 337 (525)
++.+. +..|+++|++|...+... .... ..... +.... ...+............+... + +.+.+.
T Consensus 407 ~i~~~--~~~psa~El~D~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~g~~~~~~~~~~~~~e----g-~~~~v~ 478 (658)
T 4bby_A 407 EIAKQ--RCAPASIRLMDNQQFQFGHALKPQVSSIFTS-FLDGLKKFYITKFKGFDPNQLSVATLLFE----G-DREKVL 478 (658)
T ss_dssp HHHHT--TCCCSEEEEECHHHHHHHHHTSSCCCCTTCC---------------CCCTTTCEEEEEEEE----E-CHHHHH
T ss_pred HHHHc--CCCccccccccHHHHHHHHhhcccccccccc-cccchhhhhhhhhccCChHHHHHHHHHhc----c-cHHHHH
Confidence 99875 478999999987543110 0000 00000 00000 00001111112233333332 1 566677
Q ss_pred HHHHHHHhhccCCCCccccccchHHHHHHhhhhhhHHHhhccCccCCccceeeccccccHHHHHhHHHHHhhhhc--CCC
Q 009793 338 KELQTLFKGLSYLPGFMFEKDVSYVEFLNRVRSGELKLESQGLWEVPHPWLNLFLPKSRISDFNKGVFRDIVLKR--NIT 415 (525)
Q Consensus 338 ~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~lW~~r~~~~d~~vP~~~l~~~~~~i~~~l~~~~--~~~ 415 (525)
+..+.+.+.+...++.....+.....+..+.............+. .....|+++|+++++++++.+.+.+.+.. .+.
T Consensus 479 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~avP~~~l~~~~~~v~~~l~~~~~~~g~ 557 (658)
T 4bby_A 479 QHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYMRDLGLEYYI-IGESFETSAPWDRVVDLCRNVKERIRRECKEKGV 557 (658)
T ss_dssp HHHHHHHHHHHTTTCEECCHHHHHHHHHHHHHHHHHHHHHHHTTE-EEEEEEEEEEGGGHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhhCcchhhhhHHHHHHHHhhHHHHHHhhccccCC-ccceEEEEeeHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 777777777765555432233222222222211111100011110 11235999999999999987743332210 111
Q ss_pred -CccEEEEeCCCCCCCCCccccccCCcE--EEEEccccCC-ChhhHHHHHHHHHHHHHHHH--------HcCCc--eeec
Q 009793 416 -TGPVLVYPMNRNKWDDRMSAVIPDEDV--FYTVGFLHSS-GFDEWEAFDDQNKEILKFCE--------NAGIK--VKQY 481 (525)
Q Consensus 416 -~~~i~~~~~~~~~~~~~~~~~~~dg~~--h~~i~~~~~~-~~~~~~~~~~~~~~l~~~~~--------~~G~g--~~~y 481 (525)
...... ....|.++++. |+++.+ +.. ..+..+.+++..+.+.+.+. +||+| +++|
T Consensus 558 ~~~~~~~----------~~~~h~~dg~~~l~~~~~~-~~~~~~d~~~~~~~~~~~~~~~v~~~GGsiS~EHGIG~~k~~~ 626 (658)
T 4bby_A 558 QFPPLST----------CRVTQTYDAGACIYFYFAF-NYRGISDPLAVFEQTEAAAREEILANGGSLSHHHGVGKLRKQW 626 (658)
T ss_dssp SSCCEEE----------EEEEEECSSEEEEEEEEEE-ECTTCSCHHHHHHHHHHHHHHHHHHTTCCSCSSSCCTTTSGGG
T ss_pred cccccce----------EEEEEEeccCceEEEEecC-CcCCchhHHHHHHHHHHHHHHHHHHcCCeEEEcccchHHHHHH
Confidence 111111 11245667664 444444 322 23445555666666666654 46788 7888
Q ss_pred CCCCCChHHHHHhhhhhHHHHHHhhhcCCCcCcCCCCccc
Q 009793 482 LPYHRNKEEWIKHFGSKWNTFAQRKAHFDPKMILSPGQRI 521 (525)
Q Consensus 482 l~~~~~~~~w~~~~G~~~~~~~~iK~~~DP~gilNPGk~~ 521 (525)
+..++++. .++.|++||+.|||+|||||||++
T Consensus 627 l~~~~g~~--------~l~lmr~IK~a~DP~gILNPGKll 658 (658)
T 4bby_A 627 LKESISDV--------GFGMLKSVKDYVDPTNIFGNRNLL 658 (658)
T ss_dssp HHHHHCHH--------HHHHHHHHHHHHSTTCSSCSCCCC
T ss_pred HHHhcCHH--------HHHHHHHHHHHhCcccCCCCCCCC
Confidence 87666666 899999999999999999999986
No 5
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=100.00 E-value=2.9e-55 Score=474.43 Aligned_cols=444 Identities=15% Similarity=0.135 Sum_probs=306.3
Q ss_pred ccccccc-cCceeecChhHHHHHhcccc---------CcCCCCccEEEECCCHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 009793 36 HKLLTLD-IGARLHLDPAAIKSASSDYG---------NIFKENPVAVLYPSSTEDIVALVKAAYNSSVPFKIAAKGRGHS 105 (525)
Q Consensus 36 ~~l~~~~-~~~~v~~~~~~~~~~~~d~~---------~~~~~~p~~vv~P~~~~ev~~~v~~a~~~~~~~~v~~~g~G~~ 105 (525)
.+|+.+. . ++|.+|+.++..|++|.+ +.+...|.+|++|+|++||+++|++|+ ++++||+|+|||||
T Consensus 96 ~~L~~~l~g-~~v~~~~~~~~~y~~d~~~~~~~~~~~g~~~~~p~~vv~P~s~eeV~~iv~~a~--~~~~pv~~~GgGts 172 (584)
T 2uuu_A 96 RELKAFFLP-DQLKDDKLARITHTFGKSLRDLIRVRIGQVKNAPDLIVLPHSHEEVERLVQLAH--KYNVVIIPMGGGSN 172 (584)
T ss_dssp HHHHTTSCG-GGEECSHHHHHHTTCCSSHHHHHHHHTTCCCCCCSEEECCCSHHHHHHHHHHHH--HHTCEEEEESSCCC
T ss_pred HHHHhhcCC-CeEEECHHHHHHhccCCchhhhhhhccCccCCCCCEEEeCCCHHHHHHHHHHHH--HcCCeEEEEeCCCC
Confidence 3455554 4 789999999888876421 224678999999999999999999998 89999999999999
Q ss_pred CCCCCcC----CCcEEEEcCCccCcCCCCeEEEcC-CcEEEEcCCccHHHHHHHHHhCCCc-ccccCCCCceeEeeecCC
Q 009793 106 VRGQAMA----DGGVVVEMMALKNYRNGNGITVGS-GFYADVAGEQLWIDVLNATLEHGLA-PASWTDYLYLTVGGTLSN 179 (525)
Q Consensus 106 ~~g~~~~----~~gvvidl~~mn~i~~~~~i~id~-~~~v~v~aGv~~~~l~~~l~~~gl~-p~~~~~~~~~tvGG~~~~ 179 (525)
+.|++.+ .++|+|||++||+ ++++|+ +.+++||||++|.+|+++|.++|+. |+++.+...+||||++++
T Consensus 173 ~~gg~~~~~~~~g~vvidl~~mn~-----I~~id~~~~~v~v~aGv~~~~l~~~l~~~Gl~~~~~p~s~~~~tvGG~ia~ 247 (584)
T 2uuu_A 173 IVGAIEPVSNERFTVSIDMRRMNK-----VLWVDRREMTACIQVGIMGPELEKQLHKQGVSLGHDPDSFEFSTLGGWLAT 247 (584)
T ss_dssp SSCTTSCCCCSSCEEEEECTTCCC-----EEEEETTTTEEEEETTCBHHHHHHHHHHTTEECCCCCTTGGGCBHHHHHHH
T ss_pred CCCCCcccCCCCCEEEEECCCCCc-----cEEEcCCCCEEEECCCCcHHHHHHHHHHcCCeeCcCCCccCCeeEeeeccC
Confidence 9988876 3679999999996 678998 8999999999999999999999984 777776677999999999
Q ss_pred CCCCCCccccCcccccEEEEEEEecCccEEEe---cCCCChhHHHHHhcCCCcceEEEEeEEEEEecCCceEEEEEEeCC
Q 009793 180 AGISGQTFRYGPQISNVYELDVVTGKGELMTC---SALKNSELFYAALGGLGQFGIITRARIALEPAPKRVKWVRMLYSD 256 (525)
Q Consensus 180 ~g~g~~~~~yG~~~d~v~~~~vV~~dG~~~~~---~~~~~~dl~~~~~Gs~G~lGiit~~tl~l~p~p~~~~~~~~~~~~ 256 (525)
+++|..+.+||.++|+|++++||++||++++. ....++||+++++||+|+|||||+++||++|.|+....+.+.|++
T Consensus 248 na~G~~~~~yG~~~d~V~~levVl~dG~i~~~~~~~~~~g~dl~~~~~GseGtlGIIT~~tlrl~p~p~~~~~~~~~f~~ 327 (584)
T 2uuu_A 248 CSSGHQSDKYGDIEDMAVSFRTVTPTGTLELRNGARSGAGINYKHIILGSEGTLGIITEAVMKVHAVPQAVEYYGFLFPT 327 (584)
T ss_dssp TCCCTTHHHHCCHHHHEEEEEEEETTEEECCC-------CCCTHHHHTTCTTSSCEEEEEEEECEECCSEEEEEEEEESS
T ss_pred CCCcccccCcCcHHHheeeEEEEeCCCCEEECCccccCCCcchhhhhccCCCCcEEEEEEEEEEEecccceEEEEEEcCC
Confidence 99899999999999999999999999998762 234689999999999999999999999999999988888999999
Q ss_pred hhhHHHHHHHHHHccCcCCccccccccceeeecC-CccCCCcccCCC-------CCCCcccccccccccEEEEEEEEeee
Q 009793 257 FSSFSRDQEYLISMNGRRQKQALDYLEGTLIMDQ-GSLDNWRSSFFP-------PSDHPKIISQVKTHAIIYCLEVAKYY 328 (525)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~e~~d~~~~~~~-~~~~~~~~~~~~-------~~~~~~~~~l~~~~~~~~~~e~~~~~ 328 (525)
++++.+++..+.+. ++.|+++|++|...+... ...... .... ......+.+++.+..+++++|+.+
T Consensus 328 ~~~a~~~~~~~~~~--~~~p~a~El~d~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~llve~~g-- 401 (584)
T 2uuu_A 328 FAHAVSALQQIRSS--EVIPTMIRVYDPEETQLSFAWKPSK--GAVSEFTSAMVKKYLHYIRSFDFKNVCLSIIGFEG-- 401 (584)
T ss_dssp HHHHHHHHHHHHHH--TCCCSEEEEECHHHHHHHHHTCCSC--CCTTCCHHHHHHHHHHHTTTSCTTTCEEEEEEEEE--
T ss_pred HHHHHHHHHHHHhc--CCCceEEEEechhHHHHHhhccCcc--cccchhhhhhHHHhhhhccCCCCCccEEEEEEEec--
Confidence 99999999988875 378999999998643210 000000 0000 000000123443456788888753
Q ss_pred CCCCchhhHHHHHHHHhhccCCCCccccccchHHHHHHhhhhhhHHHhhccCccCC--ccceeeccccccHHHHHhHHHH
Q 009793 329 DDHTQSTLHKELQTLFKGLSYLPGFMFEKDVSYVEFLNRVRSGELKLESQGLWEVP--HPWLNLFLPKSRISDFNKGVFR 406 (525)
Q Consensus 329 ~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~lW~~r--~~~~d~~vP~~~l~~~~~~i~~ 406 (525)
+.++++++++.+.+.+...++.....+ ....|...+.. .+..+...|... ....|++||+++++++++++ +
T Consensus 402 ---~~~~v~~~~~~~~~~~~~~g~~~~~~~--~~~lW~~r~~~-~~~l~~~~~~~g~~~~~~Dv~VP~~~l~~~~~~~-~ 474 (584)
T 2uuu_A 402 ---PKKVVDFHRTSVFDILSKNAAFGLGSA--PGKTWAEKRYD-LPYIRDFLLDHNMWVDVAETTVSYANLQTLWKDA-K 474 (584)
T ss_dssp ---CHHHHHHHHHHHHHHHHTTTCEEEEEE--STTHHHHGGGG-HHHHHHHHHTTTEEEEEEEEEEEHHHHHHHHHHH-H
T ss_pred ---ChHHHHHHHHHHHHHHHHCCCccchHH--HHHHHHHhhhc-hHHHHhhhcccCCccccceEEeeHHHHHHHHHHH-H
Confidence 566788888888888876555422211 11222222111 111122222211 12359999999999999988 4
Q ss_pred Hh----hhhcCCCCccEEEEeCCCCCCCCCccccccCCc--EEEEEccccCCChhhHHHHHHHHHHHHHHH--------H
Q 009793 407 DI----VLKRNITTGPVLVYPMNRNKWDDRMSAVIPDED--VFYTVGFLHSSGFDEWEAFDDQNKEILKFC--------E 472 (525)
Q Consensus 407 ~l----~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~--~h~~i~~~~~~~~~~~~~~~~~~~~l~~~~--------~ 472 (525)
++ ..+. + ..+.++. +..|++|++ +|+++.+ +...++..+++.+..+++.+.+ .
T Consensus 475 ~~l~~~~~~~-g--~~~~~~~---------h~gH~gd~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~gGsiS~ 541 (584)
T 2uuu_A 475 QTFVKHFKDQ-G--IPAWICA---------HISHTYTNGVCLYFIFAS-KQNENKDMAQYIEAKKLMTDIIFKYGGSLSH 541 (584)
T ss_dssp HHHHHHHHTT-T--CCEEEEE---------EEEEEETTEEEEEEEEEE-ECCTTCCTHHHHHHHHHHHHHHHHTTCCCC-
T ss_pred HHHHhHHHhc-C--CeeEEEE---------EEEeecCCCcEEEEEecc-CCCChhhHHHHHHHHHHHHHHHHHcCCcEEe
Confidence 55 3221 1 1122221 123566654 3443433 3222333444455555665555 4
Q ss_pred HcCCc--eeecCCCCCChHHHHHhhhhhHHHHHHhhhcCCCcCcCCCCccc
Q 009793 473 NAGIK--VKQYLPYHRNKEEWIKHFGSKWNTFAQRKAHFDPKMILSPGQRI 521 (525)
Q Consensus 473 ~~G~g--~~~yl~~~~~~~~w~~~~G~~~~~~~~iK~~~DP~gilNPGk~~ 521 (525)
+||+| +++|+...+++. .++.|++||+.|||+|||||||+|
T Consensus 542 EHGiG~~k~~~l~~~~g~~--------~~~lmr~iK~a~DP~gIlNPGki~ 584 (584)
T 2uuu_A 542 HHGVGYEHVPWMTRYATRG--------WINVYRSLKETIDPKDICNPRKLI 584 (584)
T ss_dssp -----------------CT--------HHHHHHHHHHHHCTTCCBSCCCC-
T ss_pred cccCCcccHHHHHHhcCHH--------HHHHHHHHHHHcCCCcCCCCCCCC
Confidence 67888 999999888887 899999999999999999999986
No 6
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=100.00 E-value=6.3e-54 Score=464.37 Aligned_cols=445 Identities=14% Similarity=0.103 Sum_probs=318.9
Q ss_pred ccccccccCceeecChhHHHH----Hhcc------ccC--cCCCCccEEEECCCHHHHHHHHHHHHcCCCCcEEEEecCC
Q 009793 36 HKLLTLDIGARLHLDPAAIKS----ASSD------YGN--IFKENPVAVLYPSSTEDIVALVKAAYNSSVPFKIAAKGRG 103 (525)
Q Consensus 36 ~~l~~~~~~~~v~~~~~~~~~----~~~d------~~~--~~~~~p~~vv~P~~~~ev~~~v~~a~~~~~~~~v~~~g~G 103 (525)
.+|+++..+++|.+|+.++.. |++| |+. .+...|.+||+|+|++||+++|++|+ ++++||+|||+|
T Consensus 26 ~~L~~~~g~~~v~~d~~~~~~~~~~y~~d~~~~d~~~~~~~~~~~p~~Vv~P~s~~eV~~iv~~a~--~~~~pv~~~g~G 103 (560)
T 1e8g_A 26 QDIIRIVGSENVEVISSKDQIVDGSYMKPTHTHDPTHVMDQDYFLASAIVAPRNVADVQSIVGLAN--KFSFPLWPISIG 103 (560)
T ss_dssp HHHHHHHCGGGEEECC-----CCBCSSSBCSSSCSSCCSCTTSSCCSEEECCSSHHHHHHHHHHHH--HHTCCEEEESSC
T ss_pred HHHHHhhCcccEecCHHHhhhhhhhhccccccccccccccccccCCcEEEeCCCHHHHHHHHHHHH--HcCCcEEEecCC
Confidence 567777777889999999999 8887 554 46789999999999999999999998 899999999999
Q ss_pred CCCC-CCCcC--CCcEEEEc-CCccCcCCCCeEEEcC-CcEEEEcCCccHHHHHHHHHhCCCc---ccccCCCCceeEee
Q 009793 104 HSVR-GQAMA--DGGVVVEM-MALKNYRNGNGITVGS-GFYADVAGEQLWIDVLNATLEHGLA---PASWTDYLYLTVGG 175 (525)
Q Consensus 104 ~~~~-g~~~~--~~gvvidl-~~mn~i~~~~~i~id~-~~~v~v~aGv~~~~l~~~l~~~gl~---p~~~~~~~~~tvGG 175 (525)
|++. |++.+ .+||+||| ++||+ ++++|+ +.+++||||+++.+|+++|.++|++ |+++++...+||||
T Consensus 104 t~~~~gg~~p~~~~gvvidl~~~mn~-----il~id~~~~~v~v~aGv~~~~l~~~l~~~Gl~~~~~~~p~~~~~~tigG 178 (560)
T 1e8g_A 104 RNSGYGGAAPRVSGSVVLDMGKNMNR-----VLEVNVEGAYCVVEPGVTYHDLHNYLEANNLRDKLWLDVPDLGGGSVLG 178 (560)
T ss_dssp CCTTTTTTCCSSTTCEEEECTTTCCC-----EEEEETTTTEEEECTTCBHHHHHHHHHHTTCTTTEECCCCSSTTSBHHH
T ss_pred CcCCcCCCCCCcCCEEEEEchHhcCC-----eEEEcCCCCEEEEeCCCCHHHHHHHHHHcCCccccCCCCCCCCccchhh
Confidence 9987 76664 48999999 99996 679998 8999999999999999999999976 55665555789999
Q ss_pred ecCCCCCCCCccccCcccccEEEEEEEecCccEEEecCC--CC----------------hhHHHHHhc----------CC
Q 009793 176 TLSNAGISGQTFRYGPQISNVYELDVVTGKGELMTCSAL--KN----------------SELFYAALG----------GL 227 (525)
Q Consensus 176 ~~~~~g~g~~~~~yG~~~d~v~~~~vV~~dG~~~~~~~~--~~----------------~dl~~~~~G----------s~ 227 (525)
+++++|.|.. +||.++|+|++++||++||++++++.. ++ ..+|+++.| ++
T Consensus 179 ~~~~~g~g~~--~yG~~~d~v~~l~vVl~dG~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~Gy~l~~L~~~ 256 (560)
T 1e8g_A 179 NAVERGVGYT--PYGDHWMMHSGMEVVLANGELLRTGMGALPDPKRPETMGLKPEDQPWSKIAHLFPYGFGPYIDGLFSQ 256 (560)
T ss_dssp HHHTTCBCSS--TTCBTGGGEEEEEEEETTSCEEECGGGGSCCCCCGGGTTCCGGGSCCCTTTTTCSCCSSCCCGGGGSS
T ss_pred hccCCCCCcc--cceeHHHheeeeEEEeCCCCEEEecCcccCcccccccccchhhhhhhhcccccccccCCcchhccccc
Confidence 9987776654 899999999999999999999999852 22 222333222 35
Q ss_pred CcceEEEEeEEEEEecCCceEEEEEEeCChhhHHHHHH---HHHHccCcCCccccccccceeeecC-CccCCCcccCCC-
Q 009793 228 GQFGIITRARIALEPAPKRVKWVRMLYSDFSSFSRDQE---YLISMNGRRQKQALDYLEGTLIMDQ-GSLDNWRSSFFP- 302 (525)
Q Consensus 228 G~lGiit~~tl~l~p~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~e~~d~~~~~~~-~~~~~~~~~~~~- 302 (525)
|||||||++|||++|.|+....+.+.|++++++.+++. ++.+. ++.|+.+|++|....... .....+ ..
T Consensus 257 GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~a~~~~~~~~~~~~~--~~~p~~~el~d~~~~~~~l~~~~~~----~~~ 330 (560)
T 1e8g_A 257 SNMGIVTKIGIWLMPNPGGYQSYLITLPKDGDLKQAVDIIRPLRLG--MALQNVPTIRHILLDAAVLGDKRSY----SSR 330 (560)
T ss_dssp SSSEEEEEEEEECEECCSCEEEEEEEECSTTHHHHHHHHHHHHHHT--TSSCSCCEEEEHHHHHHHHCCGGGT----CCC
T ss_pred CcEEEEEEEEEEEEeCCCceEEEEEEcCCHHHHHHHHHHHHHHHHc--CCCcceeEEechHHHhhhhhhhhhh----ccC
Confidence 89999999999999999998899999999999777654 34443 378899999987620000 000100 11
Q ss_pred -CCCCcc-cccccc---cccEEEEEEEEeeeCCCCchhhHHHHHHHHhhccCCCCccc--cccch-HHHHHHhhhhhh--
Q 009793 303 -PSDHPK-IISQVK---THAIIYCLEVAKYYDDHTQSTLHKELQTLFKGLSYLPGFMF--EKDVS-YVEFLNRVRSGE-- 372 (525)
Q Consensus 303 -~~~~~~-~~~l~~---~~~~~~~~e~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~--~~~~~-~~~~~~~~~~~~-- 372 (525)
...+.. ...+.. ...+++++|+. + +.+.++++++.+.+.+...++... ..+.. ...+|.+.....
T Consensus 331 ~~~~p~~~~~~l~~~~~~~~~~l~~e~~----g-~~~~v~~~~~~i~~i~~~~~~~~~~~~~~~~e~~~~w~R~~~~~~~ 405 (560)
T 1e8g_A 331 TEPLSDEELDKIAKQLNLGRWNFYGALY----G-PEPIRRVLWETIKDAFSAIPGVKFYFPEDTPENSVLRVRDKTMQGI 405 (560)
T ss_dssp SSCCCHHHHHHHHHHHTCCSEEEEEEEE----S-CHHHHHHHHHHHHHHHTTSTTCEEECGGGSCTTCHHHHHHHHTTTC
T ss_pred CCCCCHHHHHHHHhhcCCCceEEEEEEe----C-CHHHHHHHHHHHHHHHHhCCCceeeccccchhhhhHHHHHhhcccC
Confidence 000000 000000 13578888864 3 667788888888888866554321 22211 122332211100
Q ss_pred H--HHhhccCccC--Cccceeecccc--ccHHHHHhHHHHHhhhhcCCCCccEEEEeCCCCCCCCCccccccCCcEEEEE
Q 009793 373 L--KLESQGLWEV--PHPWLNLFLPK--SRISDFNKGVFRDIVLKRNITTGPVLVYPMNRNKWDDRMSAVIPDEDVFYTV 446 (525)
Q Consensus 373 ~--~~~~~~lW~~--r~~~~d~~vP~--~~l~~~~~~i~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~~h~~i 446 (525)
. ...+...|.. .+.+.|+++|+ ++++++++.+ +++.++.. +.....+|+||||+|+++
T Consensus 406 p~~~~~~~~~~~~~~~~~~~d~~vP~~~~~l~~~~~~~-~~~~~~~g---------------~~~~~~gH~gdGnlH~~i 469 (560)
T 1e8g_A 406 PTYDELKWIDWLPNGAHLFFSPIAKVSGEDAMMQYAVT-KKRCQEAG---------------LDFIGTFTVGMREMHHIV 469 (560)
T ss_dssp CCCGGGGGGGGSTTEEEEEECBEECSSHHHHHHHHHHH-HHHHHHHT---------------CCCCEEEEECSSCEEEEE
T ss_pred chhhhhccccccCCCceEEEeeecCCCHHHHHHHHHHH-HHHHHHcC---------------CceEEEEEecCCeEEEEe
Confidence 0 0011123432 12346899999 9999999998 67776521 122344689999999999
Q ss_pred c-cccCCChhhHHHHHHHHHHHHHHHHHcCCc--eee--cCCCCCChHHHHHhh---h-hhHHHHHHhhhcCCCcCcCCC
Q 009793 447 G-FLHSSGFDEWEAFDDQNKEILKFCENAGIK--VKQ--YLPYHRNKEEWIKHF---G-SKWNTFAQRKAHFDPKMILSP 517 (525)
Q Consensus 447 ~-~~~~~~~~~~~~~~~~~~~l~~~~~~~G~g--~~~--yl~~~~~~~~w~~~~---G-~~~~~~~~iK~~~DP~gilNP 517 (525)
. ..+..++++.++++++.+++++.+.+||+| +.+ |+. ++...| | ..++.|++||+.|||+|||||
T Consensus 470 ~~~~~~~~~~~~~~~~~~~~~l~~~~~eHGiG~~k~~~~~l~------~~~~~~~~~g~~~~~lm~~iK~~~DP~gILNP 543 (560)
T 1e8g_A 470 CIVFNKKDLIQKRKVQWLMRTLIDDCAANGWGEYRTHLAFMD------QIMETYNWNNSSFLRFNEVLKNAVDPNGIIAP 543 (560)
T ss_dssp EEEEETTCHHHHHHHHHHHHHHHHHHHHTTCCBSCCCGGGHH------HHHHHTCHHHHHHHHHHHHHHHHHCTTCCBCT
T ss_pred cccCCCCCHHHHHHHHHHHHHHHHHHHHcCCcccccchhHHH------HHHHHhccCCHHHHHHHHHHHHHcCccCCCCC
Confidence 5 225567788899999999999999999999 555 662 334455 5 389999999999999999999
Q ss_pred Ccccc
Q 009793 518 GQRIF 522 (525)
Q Consensus 518 Gk~~~ 522 (525)
||++.
T Consensus 544 Gk~~~ 548 (560)
T 1e8g_A 544 GKSGV 548 (560)
T ss_dssp TGGGC
T ss_pred Ccccc
Confidence 99984
No 7
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=100.00 E-value=2.1e-53 Score=457.31 Aligned_cols=446 Identities=15% Similarity=0.132 Sum_probs=314.2
Q ss_pred ccccccccCceeecChhHHHHHhccccCc--CCCCccEEEECCCHHHHHHHHHHHHcCCCCcEEEEecCCCCCC-CCCcC
Q 009793 36 HKLLTLDIGARLHLDPAAIKSASSDYGNI--FKENPVAVLYPSSTEDIVALVKAAYNSSVPFKIAAKGRGHSVR-GQAMA 112 (525)
Q Consensus 36 ~~l~~~~~~~~v~~~~~~~~~~~~d~~~~--~~~~p~~vv~P~~~~ev~~~v~~a~~~~~~~~v~~~g~G~~~~-g~~~~ 112 (525)
.+|+++..++.|.++++.+..|++||+.. +...|.+||+|+|++||+++|++|+ ++++||+|+|+|||+. |++.+
T Consensus 22 ~~L~~~l~~~~v~~~~~~~~~y~~d~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~--~~~~pv~~~g~G~~~~~g~~~~ 99 (520)
T 1wvf_A 22 QKFRALLGDDNVLVESDQLVPYNKIMMPVENAAHAPSAAVTATTVEQVQGVVKICN--EHKIPIWTISTGRNFGYGSAAP 99 (520)
T ss_dssp HHHHHHHCGGGEECSHHHHHHHHCCCSSSCGGGGCCSEEEECCSHHHHHHHHHHHH--HHTCCEEEESSCCCTTTTTTSC
T ss_pred HHHHHhcCCCeEecCcHHHHHHhcccccccccCCCCCEEEecCCHHHHHHHHHHHH--HCCCcEEEEcCCCCCCCCCCCC
Confidence 45666655678999999999999998764 6788999999999999999999998 8999999999999997 77654
Q ss_pred --CCcEEEEcCCccCcCCCCeEEEcC-CcEEEEcCCccHHHHHHHHHhCCCc-ccc-cCCCCceeEeeecCCCCCCCCcc
Q 009793 113 --DGGVVVEMMALKNYRNGNGITVGS-GFYADVAGEQLWIDVLNATLEHGLA-PAS-WTDYLYLTVGGTLSNAGISGQTF 187 (525)
Q Consensus 113 --~~gvvidl~~mn~i~~~~~i~id~-~~~v~v~aGv~~~~l~~~l~~~gl~-p~~-~~~~~~~tvGG~~~~~g~g~~~~ 187 (525)
.+|++|||++||+ ++++|+ +.+++||||++|.+|+++|.++|+. |++ .++...+||||+++++|.|..
T Consensus 100 ~~~~gvvidl~~m~~-----i~~id~~~~~v~v~aGv~~~~l~~~l~~~Gl~~~~~~~p~~~~~~igG~~~~~g~g~~-- 172 (520)
T 1wvf_A 100 VQRGQVILDLKKMNK-----IIKIDPEMCYALVEPGVTFGQMYDYIQENNLPVMLSFSAPSAIAGPVGNTMDRGVGYT-- 172 (520)
T ss_dssp SSTTCEEEECTTCCC-----EEEEETTTTEEEECTTCCHHHHHHHHHHTTCSEECCCCSSCTTCCHHHHHHTTCBCSS--
T ss_pred CCCCeEEEECCCCCc-----eEEECCCCCEEEECCCCCHHHHHHHHHHcCCcccCCCCCCCCeeeeeecccCCCcCCc--
Confidence 4899999999996 679998 8999999999999999999999985 655 333337899999987776654
Q ss_pred ccCcccccEEEEEEEecCccEEEecC--CCChhHHHHHhcCC----------CcceEEEEeEEEEEecCCceEEEEEEeC
Q 009793 188 RYGPQISNVYELDVVTGKGELMTCSA--LKNSELFYAALGGL----------GQFGIITRARIALEPAPKRVKWVRMLYS 255 (525)
Q Consensus 188 ~yG~~~d~v~~~~vV~~dG~~~~~~~--~~~~dl~~~~~Gs~----------G~lGiit~~tl~l~p~p~~~~~~~~~~~ 255 (525)
+||.++|+|+++|||++||++++++. .+++|+|++.+|+. |+|||||+++||++|.|+....+.+.|+
T Consensus 173 ~yG~~~d~v~~~evV~~dG~v~~~~~~~~~~~~l~~~~~~~~Gy~l~~l~~g~~lGiVt~~~l~l~p~p~~~~~~~~~f~ 252 (520)
T 1wvf_A 173 PYGEHFMMQCGMEVVLANGDVYRTGMGGVPGSNTWQIFKWGYGPTLDGMFTQANYGICTKMGFWLMPKPPVFKPFEVIFE 252 (520)
T ss_dssp TTCBGGGGEEEEEEECTTSCEEECGGGGSTTCSCTTTCSCCSSCCCHHHHTTSSSCEEEEEEEECEECCSEEEEEEEEEC
T ss_pred cccchhhcEeeeEEEcCCCcEEEeCCCcCCCchhHhhhcCCCCcchhhhccCCceEEEEEEEEEEEecCCeEEEEEEEeC
Confidence 89999999999999999999999975 24556655554443 4999999999999999998888889999
Q ss_pred ChhhHHH---HHHHHHHccCcCCccccccccceeeecCCccCCCcccCCCCC-C-Ccc-cccccc---cccEEEEEEEEe
Q 009793 256 DFSSFSR---DQEYLISMNGRRQKQALDYLEGTLIMDQGSLDNWRSSFFPPS-D-HPK-IISQVK---THAIIYCLEVAK 326 (525)
Q Consensus 256 ~~~~~~~---~~~~~~~~~~~~~~~~~e~~d~~~~~~~~~~~~~~~~~~~~~-~-~~~-~~~l~~---~~~~~~~~e~~~ 326 (525)
+.+++.+ ++..+.+. ++.|+++|++|........... ...++... . +.. +..+.. ...+.+++++.+
T Consensus 253 ~~~~~~~~~~~~~~~~~~--~~~p~a~El~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g 328 (520)
T 1wvf_A 253 DEADIVEIVDALRPLRMS--NTIPNSVVIASTLWEAGSAHLT--RAQYTTEPGHTPDSVIKQMQKDTGMGAWNLYAALYG 328 (520)
T ss_dssp CGGGHHHHHHHHHHHHHT--TSSCSCEEEEEHHHHHHHTTCC--GGGTCCCSSSCCHHHHHHHHHHHCCCSEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHc--CCCccceEeccHHHHHHHhccc--chhhccCCCCCCHHHHHHHHHhcCCCceEEEEEEeC
Confidence 9888766 44555543 3788999999986331100000 00001100 0 000 000110 135677777643
Q ss_pred eeCCCCchhhHHHHHHHHhhccCCCCcccccc--chHHHHHHhhhhhh---H--HHhhccCccCC--ccceeecccc--c
Q 009793 327 YYDDHTQSTLHKELQTLFKGLSYLPGFMFEKD--VSYVEFLNRVRSGE---L--KLESQGLWEVP--HPWLNLFLPK--S 395 (525)
Q Consensus 327 ~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~---~--~~~~~~lW~~r--~~~~d~~vP~--~ 395 (525)
+.++++++++.+.+.+...++...... ......|...+... . .......|... .-+.|.++|. +
T Consensus 329 -----~~~~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~w~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~vp~~~~ 403 (520)
T 1wvf_A 329 -----TQEQVDVNWKIVTDVFKKLGKGRIVTQEEAGDTQPFKYRAQLMSGVPNLQEFGLYNWRGGGGSMWFAPVSEARGS 403 (520)
T ss_dssp -----SHHHHHHHHHHHHHHHHHHTCCEEEEHHHHTTCTTHHHHHHHHTTCCCCGGGGGGGSSCTEEEEEECBEEESCHH
T ss_pred -----CHHHHHHHHHHHHHHHHHcCCeEEEecccchhhhHHHHHHHhhccCchhhhhccccccCCCceEEeccccCCCHH
Confidence 567777888777776644333211100 00000111000000 0 00011123210 1124777888 9
Q ss_pred cHHHHHhHHHHHhhhhcCCCCccEEEEeCCCCCCCCCccccccCCcEEEEEcc-ccCCChhhHHHHHHHHHHHHHHHHHc
Q 009793 396 RISDFNKGVFRDIVLKRNITTGPVLVYPMNRNKWDDRMSAVIPDEDVFYTVGF-LHSSGFDEWEAFDDQNKEILKFCENA 474 (525)
Q Consensus 396 ~l~~~~~~i~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~~h~~i~~-~~~~~~~~~~~~~~~~~~l~~~~~~~ 474 (525)
+++++++.+ +++.++. .+.....+|+||||+|+++.. ++..++++.+++.++.+++++.+.+|
T Consensus 404 ~l~~~~~~~-~~~~~~~---------------~~~~~~~gh~gdGnlH~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~eh 467 (520)
T 1wvf_A 404 ECKKQAAMA-KRVLHKY---------------GLDYVAEFIVAPRDMHHVIDVLYDRTNPEETKRADACFNELLDEFEKE 467 (520)
T ss_dssp HHHHHHHHH-HHHHHHT---------------TCCCCEEEEECSSEEEEEEEEEEETTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHH-HHHHHHc---------------CCCeeEeecccCcceeeeeccccCCCCHHHHHHHHHHHHHHHHHHHHc
Confidence 999999988 6777652 111234578999999998842 25556677788889999999999999
Q ss_pred CCc--ee--ecC---CCCCChHHHHHhhhhhHHHHHHhhhcCCCcCcCCCCccccc
Q 009793 475 GIK--VK--QYL---PYHRNKEEWIKHFGSKWNTFAQRKAHFDPKMILSPGQRIFN 523 (525)
Q Consensus 475 G~g--~~--~yl---~~~~~~~~w~~~~G~~~~~~~~iK~~~DP~gilNPGk~~~~ 523 (525)
|+| +. +|+ ..++++. .++.|++||+.|||+|||||||++..
T Consensus 468 G~G~~k~~~~~~~~~~~~~g~~--------~~~lmr~IK~a~DP~~IlNPGki~~~ 515 (520)
T 1wvf_A 468 GYAVYRVNTRFQDRVAQSYGPV--------KRKLEHAIKRAVDPNNILAPGRSGID 515 (520)
T ss_dssp TCCBSCCCGGGHHHHHHHTCHH--------HHHHHHHHHHHHCTTCCBCTTGGGCC
T ss_pred CCCccccChhHhhhhhhhcCHH--------HHHHHHHHHHHcCCCCCCCCCcCCCC
Confidence 999 22 355 3333333 89999999999999999999999853
No 8
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=100.00 E-value=3.3e-51 Score=439.80 Aligned_cols=427 Identities=13% Similarity=0.103 Sum_probs=307.7
Q ss_pred ccccccccCceeecChhHHHHHhccccCcCCCCccEEEECCCHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCcCCC-
Q 009793 36 HKLLTLDIGARLHLDPAAIKSASSDYGNIFKENPVAVLYPSSTEDIVALVKAAYNSSVPFKIAAKGRGHSVRGQAMADG- 114 (525)
Q Consensus 36 ~~l~~~~~~~~v~~~~~~~~~~~~d~~~~~~~~p~~vv~P~~~~ev~~~v~~a~~~~~~~~v~~~g~G~~~~g~~~~~~- 114 (525)
.+|+++..+++|.+++..+..|++||+ .+...|.+||+|+|++||+++|++|+ ++++||+|+||||++.|++.+.+
T Consensus 14 ~~L~~~~g~~~v~~~~~~~~~y~~d~~-~~~~~p~~Vv~P~s~~eV~~iv~~a~--~~~~~v~~~GgGt~~~G~~~~~~~ 90 (571)
T 1f0x_A 14 NELARLVGSSHLLTDPAKTARYRKGFR-SGQGDALAVVFPGSLLELWRVLKACV--TADKIILMQAANTGLTEGSTPNGN 90 (571)
T ss_dssp HHHHHHHCGGGEECCHHHHHHHHBCSS-SCBBCCSEEECCSSHHHHHHHHHHHH--HTTCEEEEESSCCCSSSTTSCCBS
T ss_pred HHHHHhcCCCeEEcCHHHHHHHhcccc-ccCCCccEEEeeCCHHHHHHHHHHHH--HcCCCEEEECCCcCCCCCccCCCc
Confidence 567777677899999999999999997 47899999999999999999999998 89999999999999999988753
Q ss_pred -----cEEEEcCCccCcCCCCeEEEcCCcEEEEcCCccHHHHHHHHHhCCCc-ccccCC-CCceeEeeecCCCCCCCCcc
Q 009793 115 -----GVVVEMMALKNYRNGNGITVGSGFYADVAGEQLWIDVLNATLEHGLA-PASWTD-YLYLTVGGTLSNAGISGQTF 187 (525)
Q Consensus 115 -----gvvidl~~mn~i~~~~~i~id~~~~v~v~aGv~~~~l~~~l~~~gl~-p~~~~~-~~~~tvGG~~~~~g~g~~~~ 187 (525)
+++|||++||+ ++++|++++++||||++|.+|+++|.++|+. |+++++ +..+||||+++++++|..+.
T Consensus 91 ~~~r~gvvIdl~rmn~-----I~~id~~~~v~v~aGv~l~~L~~~l~~~Gl~~p~~~g~s~~~~tvGG~ia~nagG~~~~ 165 (571)
T 1f0x_A 91 DYDRDVVIISTLRLDK-----LHVLGKGEQVLAYPGTTLYSLEKALKPLGREPHSVIGSSCIGASVIGGICNNSGGSLVQ 165 (571)
T ss_dssp CCSSCEEEEECTTCCC-----EEEETTTTEEEECTTCBHHHHHHHHGGGTEECSCCCGGGGGTCBHHHHHHTTCCCSCTT
T ss_pred CCcCceEEEECcccCC-----ceeECCCCeEEEcCCcCHHHHHHHHHhcCccCCcCCCccCCCceecccccCCCCccccc
Confidence 89999999997 6788876789999999999999999999985 456543 34679999999999899999
Q ss_pred ccCcccc----------------cEEEEEEEecCccEEEecC-----------------CCCh-----------------
Q 009793 188 RYGPQIS----------------NVYELDVVTGKGELMTCSA-----------------LKNS----------------- 217 (525)
Q Consensus 188 ~yG~~~d----------------~v~~~~vV~~dG~~~~~~~-----------------~~~~----------------- 217 (525)
+||.++| +|+++++|++||++++++. ..++
T Consensus 166 ~yG~~~d~~~~~~~~~~~~l~~~~vl~levVl~dG~i~~~~~~~~~~~~~~~~~~~~k~~~Gy~~~~~~~d~~~p~~~~~ 245 (571)
T 1f0x_A 166 RGPAYTEMSLFARINEDGKLTLVNHLGIDLGETPEQILSKLDDDRIKDDDVRHDGRHAHDYDYVHRVRDIEADTPARYNA 245 (571)
T ss_dssp SCSSCCSCEEEEEECTTSCEEEEECSSBCCCSSHHHHHHHHHTTCCCGGGBCCCSCCSSCTTHHHHHHCTTCSSCSCCTT
T ss_pred CCCchhhhhhhheeccCCceEEEEeeeEEEEcCCCcEEEecCccccccchhhhcccccccCCcccccccccccccccccc
Confidence 9999999 9999999999999988762 2345
Q ss_pred hHHHHH--hcCCCcceEEEEeEEEEEecCCceEEEEEEeCChhhHHHHHHHHHHccCcCCccccccccceeeecC-Cc--
Q 009793 218 ELFYAA--LGGLGQFGIITRARIALEPAPKRVKWVRMLYSDFSSFSRDQEYLISMNGRRQKQALDYLEGTLIMDQ-GS-- 292 (525)
Q Consensus 218 dl~~~~--~Gs~G~lGiit~~tl~l~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~d~~~~~~~-~~-- 292 (525)
||++++ +||+||||| |+++||++|.|+....+.+.|++.+++.+++..+.+.. +..|.++|++|...+-.. ..
T Consensus 246 Dl~~l~~a~GseGtlGV-t~~tl~l~p~p~~~~~~~~~~~~~~~a~~~~~~~~~~~-~~~p~a~E~~d~~~~~~~~~~~~ 323 (571)
T 1f0x_A 246 DPDRLFESSGCAGKLAV-FAVRLDTFEAEKNQQVFYIGTNQPEVLTEIRRHILANF-ENLPVAGEYMHRDIYDIAEKYGK 323 (571)
T ss_dssp CGGGCCSSTTCTTSSEE-EEEEEECEECCSSCEEEEEEESCHHHHHHHHHHHHHHC-SSCCSEEEEEEHHHHHHHC----
T ss_pred cHHHHHHhcCCCCceeE-EEEEEEEEecCCeEEEEEEEeCCHHHHHHHHHHHHHhC-CCCceEEEEECHHHHHHHHHhcc
Confidence 999999 999999999 99999999999998888999999999999999888522 368999999997543100 00
Q ss_pred --------cCC-----------CcccC---------------------CCCCC-CcccccccccccEEEEEEEEeeeCCC
Q 009793 293 --------LDN-----------WRSSF---------------------FPPSD-HPKIISQVKTHAIIYCLEVAKYYDDH 331 (525)
Q Consensus 293 --------~~~-----------~~~~~---------------------~~~~~-~~~~~~l~~~~~~~~~~e~~~~~~~~ 331 (525)
... |...+ +-+.. +.++.++.....+++++|+. +.
T Consensus 324 ~~~~~i~~~~~~~~p~~~~~k~~~~~~~~~~p~l~~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~~~~llve~~----g~ 399 (571)
T 1f0x_A 324 DTFLMIDKLGTDKMPFFFNLKGRTDAMLEKVKFFRPHFTDRAMQKFGHLFPSHLPPRMKNWRDKYEHHLLLKMA----GD 399 (571)
T ss_dssp -----------------------------------------------------CCHHHHHHHHHCSEEEEEEEC----TT
T ss_pred cccccccccCcccccchhcccchhhhhhcccccccccchhhhhhhhhhccccccchhhhcccccCceEEEEEEe----cC
Confidence 000 00000 00000 00111112234688999963 43
Q ss_pred CchhhHHHHHHHHhhccCCCCcccc--ccchHHHHHHhhhhhhHHHhhccCccCC---------ccceeeccccccHHHH
Q 009793 332 TQSTLHKELQTLFKGLSYLPGFMFE--KDVSYVEFLNRVRSGELKLESQGLWEVP---------HPWLNLFLPKSRISDF 400 (525)
Q Consensus 332 ~~~~~~~~~~~l~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~lW~~r---------~~~~d~~vP~~~l~~~ 400 (525)
+.++.++.++++++.+ .|.... .+.....++.+...+ .-+|+.| ....|++||+++++++
T Consensus 400 ~~~~~~~~l~~~~~~~---~g~~~~~~~~~~~~~~~~R~~~~------~~~~~~r~~~~~~~g~~~~~Dvavp~~~l~~~ 470 (571)
T 1f0x_A 400 GVGEAKSWLVDYFKQA---EGDFFVCTPEEGSKAFLHRFAAA------GAAIRYQAVHSDEVEDILALDIALRRNDTEWY 470 (571)
T ss_dssp HHHHHHHHHHHHHHHS---SCEEEECCHHHHHHHHHHHTTHH------HHHHHHHHHTTTTEEEEEEEEEECCTTCSCCS
T ss_pred cHHHHHHHHHHHHHHc---CCCeeecCccHHHHHHHHhhhhh------hHHHHhhhcchhhcCCceEEEEEecHHHhHHH
Confidence 4555667778877766 233211 111111222111100 1113222 1246999999999999
Q ss_pred HhHHHHHhhhhcCCCCccEEEEeCCCCCCCCCccccccCCcEEEEEccccCCChhhHHHHHHHHHHHHHHHHH-------
Q 009793 401 NKGVFRDIVLKRNITTGPVLVYPMNRNKWDDRMSAVIPDEDVFYTVGFLHSSGFDEWEAFDDQNKEILKFCEN------- 473 (525)
Q Consensus 401 ~~~i~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~~h~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~------- 473 (525)
+++ .+..++. . .. ....+|+++|++|+++.+ +.. .+ ..+..+++.+.+.+
T Consensus 471 -~~~-~~~l~~~-~--~~------------~~~~GH~g~g~~H~~~~~-~~~-~~----~~~i~~~~~~~v~~~GGsisa 527 (571)
T 1f0x_A 471 -EHL-PPEIDSQ-L--VH------------KLYYGHFMCYVFHQDYIV-KKG-VD----VHALKEQMLELLQQRGAQYPA 527 (571)
T ss_dssp -CCC-CHHHHTT-E--EE------------EEEEEETTTTEEEEEEEE-ETT-CC----HHHHHHHHHHHHHHTTCBSCS
T ss_pred -HHH-HHHHHhh-C--cc------------ceeEEEEcCCceEEeeec-CCc-hh----HHHHHHHHHHHHHHcCCeEEe
Confidence 887 4555431 0 01 122468999999999876 321 12 23445566666654
Q ss_pred -cCCceeecCCCCCChHHHHHhhhhhHHHHHHhhhcCCCcCcCCCCcccccc
Q 009793 474 -AGIKVKQYLPYHRNKEEWIKHFGSKWNTFAQRKAHFDPKMILSPGQRIFNN 524 (525)
Q Consensus 474 -~G~g~~~yl~~~~~~~~w~~~~G~~~~~~~~iK~~~DP~gilNPGk~~~~~ 524 (525)
||+|.. | .++. . |+++|++|||+|||||||++-++
T Consensus 528 EHGvG~~-~----~~~~----------~-m~~iK~~~DP~~ilNPGk~~t~~ 563 (571)
T 1f0x_A 528 EHNVGHL-Y----KAPE----------T-LQKFYRENDPTNSMNPGIGKTSK 563 (571)
T ss_dssp SSCCTTT-S----CCCH----------H-HHHHHHHHCTTCCBSTTTTTCCC
T ss_pred eccCCcc-c----CCHH----------H-HHHHHHHhCCCCCCCCCcCcCCc
Confidence 466643 2 2222 3 99999999999999999998543
No 9
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=100.00 E-value=4.8e-39 Score=344.25 Aligned_cols=199 Identities=18% Similarity=0.235 Sum_probs=171.7
Q ss_pred ccCcCCCCccEEEECCCHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCcC----CCcEEEEcCCccCcCCCCeEEEcC
Q 009793 61 YGNIFKENPVAVLYPSSTEDIVALVKAAYNSSVPFKIAAKGRGHSVRGQAMA----DGGVVVEMMALKNYRNGNGITVGS 136 (525)
Q Consensus 61 ~~~~~~~~p~~vv~P~~~~ev~~~v~~a~~~~~~~~v~~~g~G~~~~g~~~~----~~gvvidl~~mn~i~~~~~i~id~ 136 (525)
|+......|.+||+|+|++||+++|++|+ ++++||++|||||++.|.+.. .+|++|||++||+ +++|+
T Consensus 45 w~~~~~~~P~~vv~p~~~~~v~~~v~~a~--~~~~~~~~r~gGh~~~g~s~~~~~~~~~~~idl~~~~~------v~~d~ 116 (500)
T 3tsh_A 45 WSSPDNVKPLYIITPTQVSHIQSAVVCGR--RHSVRIRVRSGGHDYEGLSYRSLQPETFAVVDLNKMRA------VWVDG 116 (500)
T ss_dssp TTSTTSCCCSEEECCSSHHHHHHHHHHHH--HTTCEEEEESSCCCTTCTTTCCSSSCCEEEEECTTCCC------EEEET
T ss_pred ccCCCCCCceEEEEcCCHHHHHHHHHHHH--HCCCcEEEEcCCcCCCCCcCCCCCcCCeEEEECcCCCC------EEECC
Confidence 77767889999999999999999999997 899999999999999876532 4789999999984 68888
Q ss_pred -CcEEEEcCCccHHHHHHHHHhCCC-cccccCCCCceeEeeecCCCCCCCCccccCcccccEEEEEEEecCccEEEecCC
Q 009793 137 -GFYADVAGEQLWIDVLNATLEHGL-APASWTDYLYLTVGGTLSNAGISGQTFRYGPQISNVYELDVVTGKGELMTCSAL 214 (525)
Q Consensus 137 -~~~v~v~aGv~~~~l~~~l~~~gl-~p~~~~~~~~~tvGG~~~~~g~g~~~~~yG~~~d~v~~~~vV~~dG~~~~~~~~ 214 (525)
.++++||||++|.||+++|.++|+ ++...+.++.++|||+++++|+|..+.+||..+|||+++|||++||+++..+ .
T Consensus 117 ~~~~~~v~~G~~~~~~~~~l~~~g~~~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G~~~d~v~~~~vV~a~G~i~~~~-~ 195 (500)
T 3tsh_A 117 KARTAWVDSGAQLGELYYAIYKASPTLAFPAGVCPTIGVGGNFAGGGFGMLLRKYGIAAENVIDVKLVDANGKLHDKK-S 195 (500)
T ss_dssp TTTEEEEETTSBHHHHHHHHHHHCTTEECCCCSSTTSBHHHHHHTCCCCTTHHHHCCGGGGEEEEEEECTTSCEECHH-H
T ss_pred CCCEEEEccCcCHHHHHHHHHHhCCCcccCCCCCCCceecCccccccCCccccccCChhhheeeEEEECCCceEEECC-C
Confidence 899999999999999999999996 3445556678899999999999999999999999999999999999987544 4
Q ss_pred CChhHHHHHhcC-CCcceEEEEeEEEEEecCCceEEEEEEeCChhhHHHHHHHHH
Q 009793 215 KNSELFYAALGG-LGQFGIITRARIALEPAPKRVKWVRMLYSDFSSFSRDQEYLI 268 (525)
Q Consensus 215 ~~~dl~~~~~Gs-~G~lGiit~~tl~l~p~p~~~~~~~~~~~~~~~~~~~~~~~~ 268 (525)
+++||||+++|| +|+|||||++++|++|.|+....+...+...+.+.+.+..+.
T Consensus 196 ~~~dl~~a~~gg~gg~fGvvt~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~ 250 (500)
T 3tsh_A 196 MGDDHFWAVRGGGGESFGIVVAWQVKLLPVPPTVTIFKISKTVSEGAVDIINKWQ 250 (500)
T ss_dssp HCHHHHHHHTTSCSSTTCEEEEEEEECEECCSCEEEEEEEEETTTTHHHHHHHHH
T ss_pred CChHHHHHHHhhcccceEEEEEEEEEEEeCCCeEEEEEEecCcHHHHHHHHHHHH
Confidence 688999999954 689999999999999999986666666666566665555443
No 10
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=100.00 E-value=1.5e-38 Score=337.01 Aligned_cols=206 Identities=22% Similarity=0.364 Sum_probs=181.9
Q ss_pred ccCceeec-ChhHHHHHhccccCcCCCCccEEEECCCHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCcCCCcEEEEc
Q 009793 42 DIGARLHL-DPAAIKSASSDYGNIFKENPVAVLYPSSTEDIVALVKAAYNSSVPFKIAAKGRGHSVRGQAMADGGVVVEM 120 (525)
Q Consensus 42 ~~~~~v~~-~~~~~~~~~~d~~~~~~~~p~~vv~P~~~~ev~~~v~~a~~~~~~~~v~~~g~G~~~~g~~~~~~gvvidl 120 (525)
.+.+.|++ ++..+....+.|+..+...|.+|++|+|++||+++|++|+ ++++|+++|||||++.|.+...+|++|||
T Consensus 11 ~~~~~v~~p~~~~y~~~~~~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~--~~~~~~~v~ggGh~~~~~~~~~~gvvi~l 88 (459)
T 2bvf_A 11 SIQGEVIYPDDSGFDAIANIWDGRHLQRPSLIARCLSAGDVAKSVRYAC--DNGLEISVRSGGHNPNGYATNDGGIVLDL 88 (459)
T ss_dssp CCSSEEECTTSTTHHHHHCCSCTTCCCCCSEEEECCSHHHHHHHHHHHH--HHTCCEEEESSCCCTTCTTCCSSSEEEEC
T ss_pred cCCceEECCCCccHHHHHHHhhhhccCCCCEEEecCCHHHHHHHHHHHH--HcCCcEEEEcCCcCCCCccccCCeEEEEC
Confidence 45666776 4455666677898888899999999999999999999997 89999999999999998875568999999
Q ss_pred CCccCcCCCCeEEEcC-CcEEEEcCCccHHHHHHHHHhCCCcccccCCCCceeEeeecCCCCCCCCccccCcccccEEEE
Q 009793 121 MALKNYRNGNGITVGS-GFYADVAGEQLWIDVLNATLEHGLAPASWTDYLYLTVGGTLSNAGISGQTFRYGPQISNVYEL 199 (525)
Q Consensus 121 ~~mn~i~~~~~i~id~-~~~v~v~aGv~~~~l~~~l~~~gl~p~~~~~~~~~tvGG~~~~~g~g~~~~~yG~~~d~v~~~ 199 (525)
++||+ +++|+ +.+++||||++|.+|+++|.++|+..+. +..+.++|||+++++|+|..+.+||..+|+|+++
T Consensus 89 ~~l~~------i~~d~~~~~v~v~aG~~~~~l~~~l~~~Gl~~~~-g~~~~~gi~G~~~gGg~g~~~~~~G~~~d~v~~~ 161 (459)
T 2bvf_A 89 RLMNS------IHIDTAGSRARIGGGVISGDLVKEAAKFGLAAVT-GMHPKVGFCGLALNGGVGFLTPKYGLASDNILGA 161 (459)
T ss_dssp TTCCC------EEEETTTTEEEEETTCBHHHHHHHHHTTTEEECC-CSCTTSBHHHHHTTCCCCTTHHHHCCGGGGEEEE
T ss_pred CCCCC------EEECCCCCEEEECCCCCHHHHHHHHHHcCCEecC-CCCCCcccceeecCCCCccccccccCHhHhEEEE
Confidence 99995 47887 8899999999999999999999986443 3345789999999999999999999999999999
Q ss_pred EEEecCccEEEecCCCChhHHHHHhcCCCcceEEEEeEEEEEecCCceEEEEEEeCC
Q 009793 200 DVVTGKGELMTCSALKNSELFYAALGGLGQFGIITRARIALEPAPKRVKWVRMLYSD 256 (525)
Q Consensus 200 ~vV~~dG~~~~~~~~~~~dl~~~~~Gs~G~lGiit~~tl~l~p~p~~~~~~~~~~~~ 256 (525)
|||++||+++++++.+|+||||+++||+|+|||||+++||++|.|+......+.|+.
T Consensus 162 ~vV~~~G~i~~~~~~~~~dLf~a~rg~~g~~GiVt~~~l~l~p~p~~~~~~~~~~~~ 218 (459)
T 2bvf_A 162 TLVTATGDVIYCSDDERPELFWAVRGAGPNFGVVTEVEVQLYELPRKMLAGFITWAP 218 (459)
T ss_dssp EEECTTSCEEEEESSSSHHHHHHHHHHGGGTCEEEEEEEEEEECCCCEEEEEEEECC
T ss_pred EEEcCCCeEEEeCCCCChhhHhHhhccCCccEEEEEEEEEEEECCCcEEEEEEEech
Confidence 999999999999998999999999999999999999999999997665666666764
No 11
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=100.00 E-value=1.6e-38 Score=336.70 Aligned_cols=211 Identities=20% Similarity=0.239 Sum_probs=181.3
Q ss_pred cChhHHHHHhccccCcCCCCccEEEECCCHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCcC--CCcEEEEcCCccCc
Q 009793 49 LDPAAIKSASSDYGNIFKENPVAVLYPSSTEDIVALVKAAYNSSVPFKIAAKGRGHSVRGQAMA--DGGVVVEMMALKNY 126 (525)
Q Consensus 49 ~~~~~~~~~~~d~~~~~~~~p~~vv~P~~~~ev~~~v~~a~~~~~~~~v~~~g~G~~~~g~~~~--~~gvvidl~~mn~i 126 (525)
.++..+....+.|+..+...|.+|++|+|++||+++|++|+ ++++||.+||||||+.|.+.. .++++|||++||+
T Consensus 17 p~~~~y~~~~~~~n~~~~~~p~~vv~P~s~~dv~~~v~~a~--~~~~~v~v~ggGh~~~g~~~~~~~~~vvIdl~~~~~- 93 (473)
T 3rja_A 17 PGTADYERDVEPFNIRLPYIPTAIAQTQTTAHIQSAVQCAK--KLNLKVSAKSGGHSYASFGFGGENGHLMVQLDRMID- 93 (473)
T ss_dssp TTSHHHHHHTCCSBTTSCCCCSEEEECCSHHHHHHHHHHHH--HTTCCEEEESSCCCTTCGGGTSSSSCEEEECTTCCC-
T ss_pred CCCCchHHHHHHhhcccCCCCCEEEEeCCHHHHHHHHHHHH--HcCCeEEEEcCCCCCCCCcccCCCCeEEEECCCCCc-
Confidence 35567777788898888999999999999999999999997 899999999999999865542 4789999999996
Q ss_pred CCCCeEEEcC-CcEEEEcCCccHHHHHHHHHhCC-CcccccCCCCceeEeeecCCCCCCCCccccCcccccEEEEEEEec
Q 009793 127 RNGNGITVGS-GFYADVAGEQLWIDVLNATLEHG-LAPASWTDYLYLTVGGTLSNAGISGQTFRYGPQISNVYELDVVTG 204 (525)
Q Consensus 127 ~~~~~i~id~-~~~v~v~aGv~~~~l~~~l~~~g-l~p~~~~~~~~~tvGG~~~~~g~g~~~~~yG~~~d~v~~~~vV~~ 204 (525)
+.++|+ +.+++||||++|.+|+++|.++| +..+. +..+.++|||.++++|+|..+.+||.++|+|++++||++
T Consensus 94 ----i~~vd~~~~~v~v~aG~~~~~l~~~l~~~G~~~~p~-G~~~~vgvgG~~~ggg~G~~~~~~G~~~D~v~~~~vV~a 168 (473)
T 3rja_A 94 ----VISYNDKTGIAHVEPGARLGHLATVLNDKYGRAISH-GTCPGVGISGHFAHGGFGFSSHMHGLAVDSVVGVTVVLA 168 (473)
T ss_dssp ----EEEEETTTTEEEECTTCBHHHHHHHHHHHHSEECCC-CSCTTCBHHHHHHTCCCCTTHHHHCCGGGGEEEEEEECT
T ss_pred ----eEEEcCCCCEEEECCCCCHHHHHHHHHHcCCEEecc-CCCCCcEeeeeccCCCCCcccccccchHhheeeEEEEec
Confidence 455888 88999999999999999999999 64333 445678999999999999999999999999999999999
Q ss_pred CccEEEecCCCChhHHHHHhcCCCcceEEEEeEEEEEecCCceEEEEEEeCC--hhhHHHHHHHH
Q 009793 205 KGELMTCSALKNSELFYAALGGLGQFGIITRARIALEPAPKRVKWVRMLYSD--FSSFSRDQEYL 267 (525)
Q Consensus 205 dG~~~~~~~~~~~dl~~~~~Gs~G~lGiit~~tl~l~p~p~~~~~~~~~~~~--~~~~~~~~~~~ 267 (525)
||+++++++.+++||||+++||+|+|||||+++||++|.|+....+.+.+.. .+++.+.+..+
T Consensus 169 ~G~v~~~~~~~~~dLf~a~rG~~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (473)
T 3rja_A 169 DGRIVEASATENADLFWGIKGAGSNFGIVAVWKLATFPAPKVLTRFGVTLNWKNKTSALKGIEAV 233 (473)
T ss_dssp TSCEEEEETTBSHHHHHHHHHHGGGTCEEEEEEEECEECCSCEEEEEEECCCCSHHHHHHHHHHH
T ss_pred CCeEEEeCCCCCcchhhcccCCCCceEEEEEEEEEEEeCCCceEEEEEEecCccHHHHHHHHHHH
Confidence 9999999998999999999999999999999999999999876666555543 23344444433
No 12
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=100.00 E-value=1.2e-37 Score=330.62 Aligned_cols=200 Identities=20% Similarity=0.312 Sum_probs=172.1
Q ss_pred ccccCcCCCCccEEEECCCHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCcCC--CcEEEEcCCccCcCCCCeEEEcC
Q 009793 59 SDYGNIFKENPVAVLYPSSTEDIVALVKAAYNSSVPFKIAAKGRGHSVRGQAMAD--GGVVVEMMALKNYRNGNGITVGS 136 (525)
Q Consensus 59 ~d~~~~~~~~p~~vv~P~~~~ev~~~v~~a~~~~~~~~v~~~g~G~~~~g~~~~~--~gvvidl~~mn~i~~~~~i~id~ 136 (525)
..|+......|.+|++|+|++||+++|++|+ ++++||++|||||++.|.+... +|++|||++||+ +++|+
T Consensus 36 ~r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~--~~~~~v~vrGgGh~~~g~~~~~~~ggvvIdl~~m~~------i~vd~ 107 (495)
T 3fw9_A 36 PLFQNSLISKPSAIILPGSKEELSNTIRCIR--KGSWTIRLRSGGHSYEGLSYTSDTPFILIDLMNLNR------VSIDL 107 (495)
T ss_dssp GGGCSTTSCCCSEEECCCSHHHHHHHHHHHH--TSSCEEEEESSCCCTTCTTSCCSSCEEEEECTTCCC------EEEET
T ss_pred cccccccCCCCCEEEecCCHHHHHHHHHHHH--HcCCeEEEECCCcCCCCccccCCCCeEEEECCCCCc------EEEeC
Confidence 4677667889999999999999999999997 9999999999999999887652 689999999995 48888
Q ss_pred -CcEEEEcCCccHHHHHHHHHhC--CCcccccCCCCceeEeeecCCCCCCCCccccCcccccEEEEEEEecCccEEEecC
Q 009793 137 -GFYADVAGEQLWIDVLNATLEH--GLAPASWTDYLYLTVGGTLSNAGISGQTFRYGPQISNVYELDVVTGKGELMTCSA 213 (525)
Q Consensus 137 -~~~v~v~aGv~~~~l~~~l~~~--gl~p~~~~~~~~~tvGG~~~~~g~g~~~~~yG~~~d~v~~~~vV~~dG~~~~~~~ 213 (525)
+.+++||||+++.+|+++|.++ |+..+. +..+.++|||.++++|+|..+.+||..+|+|++++||++||++++ ..
T Consensus 108 ~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~-G~~~~vgigG~~~gGg~G~~~~~~G~~~D~v~~~~vV~adG~i~~-~~ 185 (495)
T 3fw9_A 108 ESETAWVESGSTLGELYYAITESSSKLGFTA-GWCPTVGTGGHISGGGFGMMSRKYGLAADNVVDAILIDANGAILD-RQ 185 (495)
T ss_dssp TTTEEEEETTCBHHHHHHHHHHHCSSEECCC-CSCTTCBHHHHHHTCCCCTTHHHHCCGGGGEEEEEEECTTCCEEC-HH
T ss_pred CCCEEEEcCCCCHHHHHHHHHHhcCCceecc-CCCCCCeEeeeccCCCCcccccCCCchhheEEEEEEEcCCCCEEE-cC
Confidence 8999999999999999999999 664332 445678999999999999999999999999999999999999997 44
Q ss_pred CCChhHHHHHhc-CCCcceEEEEeEEEEEecCCceEEEEEEeC-ChhhHHHHHHHHH
Q 009793 214 LKNSELFYAALG-GLGQFGIITRARIALEPAPKRVKWVRMLYS-DFSSFSRDQEYLI 268 (525)
Q Consensus 214 ~~~~dl~~~~~G-s~G~lGiit~~tl~l~p~p~~~~~~~~~~~-~~~~~~~~~~~~~ 268 (525)
.+++||||+++| |+|+|||||+++||++|.|+....+.+.+. +.+++.+.+..+.
T Consensus 186 ~~~~DLf~a~rGg~~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~a~~~l~~~~ 242 (495)
T 3fw9_A 186 AMGEDVFWAIRGGGGGVWGAIYAWKIKLLPVPEKVTVFRVTKNVAIDEATSLLHKWQ 242 (495)
T ss_dssp HHCHHHHHHHTTSCTTSSCEEEEEEEECEECCSSEEEEEEEEEECHHHHHHHHHHHH
T ss_pred CCChhhhhhhhcccCCCcEEEEEEEEEEEeCCCeEEEEEEeecCcHHHHHHHHHHHH
Confidence 568999999999 789999999999999999998776666664 3355555554443
No 13
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=100.00 E-value=2.2e-37 Score=329.31 Aligned_cols=201 Identities=20% Similarity=0.265 Sum_probs=170.3
Q ss_pred ccccCcCCCCccEEEECCCHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCc--CCCcEEEEcCCccCcCCCCeEEEcC
Q 009793 59 SDYGNIFKENPVAVLYPSSTEDIVALVKAAYNSSVPFKIAAKGRGHSVRGQAM--ADGGVVVEMMALKNYRNGNGITVGS 136 (525)
Q Consensus 59 ~d~~~~~~~~p~~vv~P~~~~ev~~~v~~a~~~~~~~~v~~~g~G~~~~g~~~--~~~gvvidl~~mn~i~~~~~i~id~ 136 (525)
..|+......|.+||+|+|++||+++|++|+ ++++||++|||||++.|.+. ..+|++|||++||+ +++|+
T Consensus 44 ~rw~~~~~~~P~~vv~P~s~~dV~~~v~~a~--~~~~~v~vrggGh~~~g~~~~~~~~gvvIdl~~l~~------i~vd~ 115 (518)
T 3vte_A 44 LRFISDTTPKPLVIVTPSNNSHIQATILCSK--KVGLQIRTRSGGHDAEGMSYISQVPFVVVDLRNMHS------IKIDV 115 (518)
T ss_dssp GGGCSSSSCCCSEEECCCSHHHHHHHHHHHH--HHTCEEEEESSCCCTTCTTTCCSSSEEEEECTTCCC------EEEET
T ss_pred cccccccCCCCCEEEEeCCHHHHHHHHHHHH--HcCCcEEEECCCcCCCCCccCCCCCeEEEECCCCce------eEEeC
Confidence 3577767889999999999999999999997 89999999999999998874 24799999999995 47887
Q ss_pred -CcEEEEcCCccHHHHHHHHHhCC--CcccccCCCCceeEeeecCCCCCCCCccccCcccccEEEEEEEecCccEEEecC
Q 009793 137 -GFYADVAGEQLWIDVLNATLEHG--LAPASWTDYLYLTVGGTLSNAGISGQTFRYGPQISNVYELDVVTGKGELMTCSA 213 (525)
Q Consensus 137 -~~~v~v~aGv~~~~l~~~l~~~g--l~p~~~~~~~~~tvGG~~~~~g~g~~~~~yG~~~d~v~~~~vV~~dG~~~~~~~ 213 (525)
+.+++||||++|.+|+++|.++| +..+ .+..+.++|||.++++|+|..+.+||..+|+|++++||++||++++. .
T Consensus 116 ~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~-~G~~~~vgvgG~~~gGg~G~~s~~~G~~~D~V~~~evV~adG~iv~~-~ 193 (518)
T 3vte_A 116 HSQTAWVEAGATLGEVYYWINEKNENLSFP-GGYCPTVGVGGHFSGGGYGALMRNYGLAADNIIDAHLVNVDGKVLDR-K 193 (518)
T ss_dssp TTTEEEEETTCBHHHHHHHHHHHCTTEECC-CCSCTTCBHHHHHHTCCCCTTHHHHCCGGGGEEEEEEECTTCCEECH-H
T ss_pred CCCEEEEeCCccHHHHHHHHHHhCCCceec-CCCCCCeeeeeeeCCCCCccccCCCCchhheEEEEEEEccCCeEEEe-e
Confidence 88999999999999999999875 4322 33445788999999999999999999999999999999999999964 3
Q ss_pred CCChhHHHHHhcC-CCcceEEEEeEEEEEecCCceEEEEEEeC-ChhhHHHHHHHHHH
Q 009793 214 LKNSELFYAALGG-LGQFGIITRARIALEPAPKRVKWVRMLYS-DFSSFSRDQEYLIS 269 (525)
Q Consensus 214 ~~~~dl~~~~~Gs-~G~lGiit~~tl~l~p~p~~~~~~~~~~~-~~~~~~~~~~~~~~ 269 (525)
.+++||||+++|| +|+|||||+++||++|.|+....+.+.+. +.+++.+.+..+.+
T Consensus 194 ~~~~DLf~a~rGgg~g~fGIVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~l~~~~~ 251 (518)
T 3vte_A 194 SMGEDLFWAIRGGGGENFGIIAAWKIKLVAVPSKSTIFSVKKNMEIHGLVKLFNKWQN 251 (518)
T ss_dssp HHCHHHHHHHTTSCGGGTCEEEEEEEECEECCSCEEEEEEEECCCHHHHHHHHHHHHH
T ss_pred ccccchhhheecccCCCceEEEEEEEEEEeCCCeEEEEEEEecCCHHHHHHHHHHHHH
Confidence 4589999999998 89999999999999999987655555553 33555555554443
No 14
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=100.00 E-value=2e-38 Score=332.67 Aligned_cols=206 Identities=21% Similarity=0.318 Sum_probs=180.5
Q ss_pred hccccCcCCCCccEEEECCCHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCcC-CCcEEEEcCCccCcCCCCeEEEcC
Q 009793 58 SSDYGNIFKENPVAVLYPSSTEDIVALVKAAYNSSVPFKIAAKGRGHSVRGQAMA-DGGVVVEMMALKNYRNGNGITVGS 136 (525)
Q Consensus 58 ~~d~~~~~~~~p~~vv~P~~~~ev~~~v~~a~~~~~~~~v~~~g~G~~~~g~~~~-~~gvvidl~~mn~i~~~~~i~id~ 136 (525)
.++|++.+...|.+|++|+|++||+++|++| +|+.++|+||++.+.+.+ .+|++|||++||+ ++++|+
T Consensus 10 ~~~w~~~~~~~p~~v~~P~s~~ev~~~v~~a------~~v~~~G~G~s~~~~~~~~~~g~vi~l~~l~~-----i~~~d~ 78 (422)
T 2vfr_A 10 VTNWAGNITYTAKELLRPHSLDALRALVADS------ARVRVLGSGHSFNEIAEPGDGGVLLSLAGLPS-----VVDVDT 78 (422)
T ss_dssp CBCSSSSCBCSCSSCBCCSSHHHHHHHHHHC------SSEEECSSCCCCSSTTCCCTTCEEECSTTSCC-----CEEEET
T ss_pred eecCCCCccCCCCEEEeCCCHHHHHHHHHhC------CCEEEEECCCCCCCCccCCCCcEEEEhhhCCC-----cEEEcC
Confidence 3689888899999999999999999999987 689999999999988874 4899999999996 678998
Q ss_pred -CcEEEEcCCccHHHHHHHHHhCCCcccccCCCCceeEeeecCCCCCCCCccccCcccccEEEEEEEecCccEEEecCCC
Q 009793 137 -GFYADVAGEQLWIDVLNATLEHGLAPASWTDYLYLTVGGTLSNAGISGQTFRYGPQISNVYELDVVTGKGELMTCSALK 215 (525)
Q Consensus 137 -~~~v~v~aGv~~~~l~~~l~~~gl~p~~~~~~~~~tvGG~~~~~g~g~~~~~yG~~~d~v~~~~vV~~dG~~~~~~~~~ 215 (525)
+++++||||+++.+|+++|.++|+..+++++.+.+||||+++++++|.. .+||.++|+|+++++|++||+++++++.+
T Consensus 79 ~~~~v~v~aG~~l~~l~~~l~~~Gl~l~~~~~~~~~tvGG~i~~~~~G~~-~~~G~~~d~v~~~~vv~~~G~~~~~~~~~ 157 (422)
T 2vfr_A 79 AARTVRVGGGVRYAELARVVHARGLALPNMASLPHISVAGSVATGTHGSG-VGNGSLASVVREVELVTADGSTVVIARGD 157 (422)
T ss_dssp TTTEEEEETTCBHHHHHHHHHHTTEECSCCCSSSCSBHHHHHHHTCCCCC-TTCCCGGGGEEEEEEECTTSCEEEEETTS
T ss_pred CCCEEEEcCCCCHHHHHHHHHHcCCcccCCCCCCCeeHHHHHhcCCCCCC-cccCcHHHheEEEEEEeCCCCEEEeCCCC
Confidence 8999999999999999999999987667777778899999999988865 69999999999999999999999999887
Q ss_pred ChhHHHHHhcCCCcceEEEEeEEEEEecCCceEEEEEEeCChhhHH-HHHHHHHHccCcCCcccccccc
Q 009793 216 NSELFYAALGGLGQFGIITRARIALEPAPKRVKWVRMLYSDFSSFS-RDQEYLISMNGRRQKQALDYLE 283 (525)
Q Consensus 216 ~~dl~~~~~Gs~G~lGiit~~tl~l~p~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~e~~d 283 (525)
++ |++++||+|++||||+++||+.|.|+....... +.+++++. +....+.. .+..+|+++
T Consensus 158 ~~--f~~~~g~~G~lGvit~~~l~l~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~e~~~ 218 (422)
T 2vfr_A 158 ER--FGGAVTSLGALGVVTSLTLDLEPAYEMEQHVFT-ELPLAGLDPATFETVMA-----AAYSVSLFT 218 (422)
T ss_dssp TT--GGGTSSCTTTTCEEEEEEEECEECCEEEEEEEE-EECSTTCCHHHHHHHHT-----SSSEEEEEE
T ss_pred CC--cceEEecCCCCEEEEEEEEEEEecCceEEEEEe-cCCHHHHHHHHHHHHHh-----cCCcEEEEe
Confidence 76 899999999999999999999999987655544 67888888 87776653 234555544
No 15
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=100.00 E-value=6.6e-37 Score=325.62 Aligned_cols=205 Identities=19% Similarity=0.254 Sum_probs=172.1
Q ss_pred ccCceeec-ChhHHHHHhccccCcCCCCccEEEECCCHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCcC-CCcEEEE
Q 009793 42 DIGARLHL-DPAAIKSASSDYGNIFKENPVAVLYPSSTEDIVALVKAAYNSSVPFKIAAKGRGHSVRGQAMA-DGGVVVE 119 (525)
Q Consensus 42 ~~~~~v~~-~~~~~~~~~~d~~~~~~~~p~~vv~P~~~~ev~~~v~~a~~~~~~~~v~~~g~G~~~~g~~~~-~~gvvid 119 (525)
.+++.|++ ++..+....+.|+..+...|.+||+|+|++||+++|++|+ ++++||++|||||++.|.+.+ .+|++||
T Consensus 7 s~~~~~~~p~~~~y~~~~~~~n~~~~~~P~~vv~P~s~~dV~~~v~~a~--~~~~~v~vrggGh~~~g~~~~~~~gvvId 84 (501)
T 3pop_A 7 SVPPFTVGREDPRYIELSHSDNHRFVVEPEEFFLPATPDDVVASLQKAV--TEGRGVACRSGGHCGQDFVGTPRRDLVLD 84 (501)
T ss_dssp --CCEEEETTSTTHHHHTCCSCTTSCCCCSEEEECSSHHHHHHHHHHHH--HTTCCEEEESSCCCSSSTTTSSCCSEEEE
T ss_pred cCCCceECCCCcchHHHHHHHhhccCCCCCEEEEeCCHHHHHHHHHHHH--HcCCeEEEEeCCccCCCccccCCCEEEEE
Confidence 45554554 4557777778898888999999999999999999999997 899999999999999988875 4799999
Q ss_pred cCCccCcCCCCeEEEcC-CcEEEEcCCccHHHHHHHHH-hCCCcccccCCCCceeEeeecCCCCCCCCccccCcccccEE
Q 009793 120 MMALKNYRNGNGITVGS-GFYADVAGEQLWIDVLNATL-EHGLAPASWTDYLYLTVGGTLSNAGISGQTFRYGPQISNVY 197 (525)
Q Consensus 120 l~~mn~i~~~~~i~id~-~~~v~v~aGv~~~~l~~~l~-~~gl~p~~~~~~~~~tvGG~~~~~g~g~~~~~yG~~~d~v~ 197 (525)
|++||+ +++|+ +.+++||||++|.+|+++|. ++|+..+. +.++.++|||.++++|+|..+.+||.++|+|+
T Consensus 85 l~~l~~------i~vd~~~~~v~v~aG~~~~~l~~~l~~~~Gl~~~~-G~~~~vgvgG~~~gGg~G~~~~~~G~~~D~v~ 157 (501)
T 3pop_A 85 LHNLHA------IGPAADGAGVRVGSGATVDQVQKALFRRWNAALPL-GACSAVGMGGLVAGGGYGPLSRQLGLVVDHLH 157 (501)
T ss_dssp CTTCCC------EEECTTSSSEEEETTCBHHHHHHHHHHHHSBCCCC-CSBTTCBHHHHHHHCCCCTTHHHHCCGGGGEE
T ss_pred ecccCC------eEEcCCCCEEEEECCcCHHHHHHHHHhhcCeEeCC-CCCCCceEeeccccCCCcccccccccHHHhEE
Confidence 999995 58888 88999999999999999997 57986443 33456789999999999999999999999999
Q ss_pred EEEEEe--cCcc--EEEec---CCCChhHHHHHhcC-CCcceEEEEeEEEE----------EecCC-ceEEEEEEeC
Q 009793 198 ELDVVT--GKGE--LMTCS---ALKNSELFYAALGG-LGQFGIITRARIAL----------EPAPK-RVKWVRMLYS 255 (525)
Q Consensus 198 ~~~vV~--~dG~--~~~~~---~~~~~dl~~~~~Gs-~G~lGiit~~tl~l----------~p~p~-~~~~~~~~~~ 255 (525)
++|||+ +||+ +++++ ..+|+||||+++|| +|+|||||+++||+ +|.++ ......+.|+
T Consensus 158 ~~evV~~da~G~~~~v~~~~~~~~~~~DLf~a~rG~G~g~fGIVt~~~lk~~~~~~~~~~~~p~~~~~v~~~~~~~~ 234 (501)
T 3pop_A 158 AVEVAVVDESRTVRLVTARADDTGDLGELFWAHTGGGGGNFGVVTAYEFRSPEHLATEPVGLPRAAGRLHVQKVVFP 234 (501)
T ss_dssp EEEEEEECTTSCEEEEEEETTCCHHHHHHHHHTTTSCTTSSCEEEEEEECCCTTTCBTTTTBCBCCSEEEEEEEEEE
T ss_pred EEEEEEecCCCCEEEEEeccCCCCCCccHHHHhhccCCCCcEEEEEEEEEeccccCCChhhcCCCCceEEEEEEEEc
Confidence 999999 8999 67763 35689999999998 79999999999999 77654 3344445554
No 16
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=100.00 E-value=5.2e-36 Score=320.15 Aligned_cols=195 Identities=24% Similarity=0.317 Sum_probs=169.4
Q ss_pred hhHHHHHhccccCcCCCCccEEEECCCHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCcC--CCcEEEEcCCccCcCC
Q 009793 51 PAAIKSASSDYGNIFKENPVAVLYPSSTEDIVALVKAAYNSSVPFKIAAKGRGHSVRGQAMA--DGGVVVEMMALKNYRN 128 (525)
Q Consensus 51 ~~~~~~~~~d~~~~~~~~p~~vv~P~~~~ev~~~v~~a~~~~~~~~v~~~g~G~~~~g~~~~--~~gvvidl~~mn~i~~ 128 (525)
...+......|+..+...|.+|++|+|++||+++|++|+ ++++|+++|||||++.+.+.+ .+|++|||++||+
T Consensus 25 ~~~y~~~~~~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~--~~~~~~~v~ggGh~~~~~~~~~~~~gvvIdl~~l~~--- 99 (503)
T 1zr6_A 25 SEGWDMDGTAFNLRVDYDPAAIAIPRSTEDIAAAVQCGL--DAGVQISAKGGGHSYGSYGFGGEDGHLMLELDRMYR--- 99 (503)
T ss_dssp SHHHHHHTSCSBGGGCCCCSEEEECCSHHHHHHHHHHHH--HHTCCEEEESSCCCTTCTTTTSSSSCEEEECTTCCC---
T ss_pred ccchHHHhhhhhhcccCCCCEEEEeCCHHHHHHHHHHHH--HcCCeEEEECCCcCCCCCcccCCCCcEEEECccCCC---
Confidence 344555567788778899999999999999999999997 899999999999999986664 4799999999996
Q ss_pred CCeEEEcCCcEEEEcCCccHHHHHHHHHhCC-CcccccCCCCceeEeeecCCCCCCCCccccCcccccEEEEEEEecCcc
Q 009793 129 GNGITVGSGFYADVAGEQLWIDVLNATLEHG-LAPASWTDYLYLTVGGTLSNAGISGQTFRYGPQISNVYELDVVTGKGE 207 (525)
Q Consensus 129 ~~~i~id~~~~v~v~aGv~~~~l~~~l~~~g-l~p~~~~~~~~~tvGG~~~~~g~g~~~~~yG~~~d~v~~~~vV~~dG~ 207 (525)
+++|.+++++||||++|.+|+++|.+++ +..+.+ ..+.++|||.+.++|+|..+.+||.++|+|+++|||++||+
T Consensus 100 ---i~~d~~~~v~v~aG~~~~~l~~~l~~~~gl~~~~G-~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~~vV~a~G~ 175 (503)
T 1zr6_A 100 ---VSVDDNNVATIQGGARLGYTALELLDQGNRALSHG-TCPAVGVGGHVLGGGYGFATHTHGLTLDWLIGATVVLADAS 175 (503)
T ss_dssp ---EEECTTSCEEEETTCBHHHHHHHHHHTTSEECCCC-SCTTSBHHHHHHHCCCSTTHHHHCCGGGGEEEEEEECTTSC
T ss_pred ---EEECCCCeEEEecCCCHHHHHHHHHHcCCEEeCCC-CCCcCchhhhhcCCCCCcccccccChhheEEEEEEEecCCC
Confidence 3666456899999999999999997665 754333 33567899999999999999999999999999999999999
Q ss_pred EEEecCCCChhHHHHHhcCCCcceEEEEeEEEEEecCCceEEEEEEe
Q 009793 208 LMTCSALKNSELFYAALGGLGQFGIITRARIALEPAPKRVKWVRMLY 254 (525)
Q Consensus 208 ~~~~~~~~~~dl~~~~~Gs~G~lGiit~~tl~l~p~p~~~~~~~~~~ 254 (525)
++++++.+|+||||+++||+|+|||||+++||++|.|+....+.+.|
T Consensus 176 i~~~~~~~~~dL~~a~rG~~g~~GIVt~~~l~l~p~~~~~~~~~~~~ 222 (503)
T 1zr6_A 176 IVHVSETENADLFWALRGGGGGFAIVSEFEFNTFEAPEIITTYQVTT 222 (503)
T ss_dssp EEEEBTTBSHHHHHHHTTCCSSSCEEEEEEECCEECCSCEEEEEEEE
T ss_pred EEEeCCCCCccHHHHHhccCCCcEEEEEEEEEEEecCceeEEEEEEE
Confidence 99999989999999999999999999999999999998665555555
No 17
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=100.00 E-value=1.1e-35 Score=314.73 Aligned_cols=202 Identities=23% Similarity=0.284 Sum_probs=178.9
Q ss_pred HHhccccCcCCCCccEEEECCCHHHHHHHHHHHHcCCC--CcEEEEecCCCCCCCCCcCCCcEEEEcCCccCcCCCCeEE
Q 009793 56 SASSDYGNIFKENPVAVLYPSSTEDIVALVKAAYNSSV--PFKIAAKGRGHSVRGQAMADGGVVVEMMALKNYRNGNGIT 133 (525)
Q Consensus 56 ~~~~d~~~~~~~~p~~vv~P~~~~ev~~~v~~a~~~~~--~~~v~~~g~G~~~~g~~~~~~gvvidl~~mn~i~~~~~i~ 133 (525)
.+.++|++ +...|.+|++|+|++||+++|++|+ ++ ++|++++|+|||+.+.+.+.+|++|||++||+ +++
T Consensus 31 ~~~~~W~~-~~~~p~~vv~P~s~eev~~~v~~a~--~~~~~~~v~~~G~G~s~~~~~~~~~gvvIdl~~l~~-----i~~ 102 (481)
T 4feh_A 31 TRLTGWGR-TAPSVANVLRTPDAEMIVKAVARVA--ESGGGRGAIARGLGRSYGDNAQNGGGLVIDMTPLNT-----IHS 102 (481)
T ss_dssp EEECCTTC-CSCEEEEEEECSCHHHHHHHHHHHH--TTTCTTCEEEECSSCSSSSTTCCTTSEEEECTTCCC-----EEE
T ss_pred ceeecccC-CCCCCCEEEeCCCHHHHHHHHHHHH--HcCCCceEEEEeCCcCCCCCCCCcCeEEEECccCCC-----ceE
Confidence 35688965 6899999999999999999999998 67 79999999999998877656899999999996 679
Q ss_pred EcC-CcEEEEcCCccHHHHHHHHHhCCCcccccCCCCceeEeeecCCCCCCCCccccCcccccEEEEEEEecCccEEEec
Q 009793 134 VGS-GFYADVAGEQLWIDVLNATLEHGLAPASWTDYLYLTVGGTLSNAGISGQTFRYGPQISNVYELDVVTGKGELMTCS 212 (525)
Q Consensus 134 id~-~~~v~v~aGv~~~~l~~~l~~~gl~p~~~~~~~~~tvGG~~~~~g~g~~~~~yG~~~d~v~~~~vV~~dG~~~~~~ 212 (525)
+|+ +++++||||+++.+|+++|.++|++.+..++...+||||+++++++|..+.+||.+.|+|+++++|++||++++++
T Consensus 103 ~d~~~~~v~v~aGv~l~~L~~~l~~~Gl~l~~~~g~~~~tvGGaia~~a~G~~~~~~G~~~d~V~~~evV~~dG~v~~~s 182 (481)
T 4feh_A 103 IDADTKLVDIDAGVNLDQLMKAALPFGLWVPVLPGTRQVTVGGAIACDIHGKNHHSAGSFGNHVRSMDLLTADGEIRHLT 182 (481)
T ss_dssp EETTTTEEEEETTCBHHHHHHHHGGGTEECSCCCSCSCCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEEECTTSCEEEEC
T ss_pred EcCCCCEEEEcCCccHHHHHHHHHHcCCEEEEeCCcCccccCCccccccCCCCcccCCCccceEeEEEEEeCCCCEEEeC
Confidence 998 8899999999999999999999997554445567899999999998888899999999999999999999999999
Q ss_pred CC-CChhHHHHHhcCCCcceEEEEeEEEEEecCCce-EEEEEEeCChhhHHHHHH
Q 009793 213 AL-KNSELFYAALGGLGQFGIITRARIALEPAPKRV-KWVRMLYSDFSSFSRDQE 265 (525)
Q Consensus 213 ~~-~~~dl~~~~~Gs~G~lGiit~~tl~l~p~p~~~-~~~~~~~~~~~~~~~~~~ 265 (525)
+. +|+|||++++||+|++||||+++|+++|.|+.. ......+.+++++.+..+
T Consensus 183 ~~~~~~dLf~a~rgs~G~~GIIt~~tl~l~p~~~~~~~~~~~~~~~l~~~~~~~~ 237 (481)
T 4feh_A 183 PTGEDAELFWATVGGNGLTGIIMRATIEMTPTSTAYFIADGDVTASLDETIALHS 237 (481)
T ss_dssp SSSTTHHHHHHHTTCTTTTCEEEEEEEECEECSCSEEEEEEEECSSHHHHHHHHS
T ss_pred CCCCChHHHHHhhccCCCceEEEEEEEEEEeCCccEEEEEEEeCCCHHHHHHHHH
Confidence 98 899999999999999999999999999998653 333566777777766554
No 18
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=100.00 E-value=9.7e-36 Score=319.18 Aligned_cols=199 Identities=20% Similarity=0.273 Sum_probs=166.9
Q ss_pred eecChhHHHHHh-ccccCcCCCCccEEEECCCHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCcC-CCcEEEEcCCcc
Q 009793 47 LHLDPAAIKSAS-SDYGNIFKENPVAVLYPSSTEDIVALVKAAYNSSVPFKIAAKGRGHSVRGQAMA-DGGVVVEMMALK 124 (525)
Q Consensus 47 v~~~~~~~~~~~-~d~~~~~~~~p~~vv~P~~~~ev~~~v~~a~~~~~~~~v~~~g~G~~~~g~~~~-~~gvvidl~~mn 124 (525)
+..++..+.... +.|+..+...|.+||+|+|++||+++|++|+ ++++||++|||||++.|.+.+ .+|++|||++||
T Consensus 33 ~~p~d~~Y~~~~~~~~n~~~~~~p~~vv~p~s~~dv~~~v~~a~--~~~~~~~vrggGh~~~g~~~~~~~gvvIdl~~l~ 110 (521)
T 2ipi_A 33 VDRVDRRYQDLVTRGFNGRFRGRPDVVYVVHTADQVVDAVNQAM--AAGQRIAVRSGGHCFEGFVDDPAVRAVIDMSQMR 110 (521)
T ss_dssp EESSSTTHHHHHTCCSCTTCCCCCSEEEECSSHHHHHHHHHHHH--HHTCCEEEESSCCCTTCGGGCTTCCEEEECTTCC
T ss_pred ECCCCcchHHHHhccccccccCCCCEEEEcCCHHHHHHHHHHHH--HcCCeEEEECCCcCCCCCcccCCCeEEEecccCC
Confidence 333555676666 8888778899999999999999999999997 899999999999999987654 489999999999
Q ss_pred CcCCCCeEEEcC-CcEEEEcCCccHHHHHHHHH-hCCCcccccCCCCceeEeeecCCCCCCCCccccCcccccEEEEEEE
Q 009793 125 NYRNGNGITVGS-GFYADVAGEQLWIDVLNATL-EHGLAPASWTDYLYLTVGGTLSNAGISGQTFRYGPQISNVYELDVV 202 (525)
Q Consensus 125 ~i~~~~~i~id~-~~~v~v~aGv~~~~l~~~l~-~~gl~p~~~~~~~~~tvGG~~~~~g~g~~~~~yG~~~d~v~~~~vV 202 (525)
+ +++|+ +.+++||||++|.+|+++|. ++|+..+.. ..+.++|||+++++|+|..+.+||..+|+|+++|||
T Consensus 111 ~------i~~d~~~~~v~v~aG~~~~~l~~~l~~~~Gl~~~~G-~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~evV 183 (521)
T 2ipi_A 111 Q------VFYDSGKRAFAVEPGATLGETYRALYLDWGVTIPAG-VCPQVGVGGHVLGGGYGPLSRRDGVVADHLYAVEVV 183 (521)
T ss_dssp C------EEEETTTTEEEECTTSBHHHHHHHHHHHHSBCCCCC-SCTTCBHHHHTTTTCCCTTHHHHCCGGGGEEEEEEE
T ss_pred C------eEEeCCCCEEEEeCCcCHHHHHHHHHHhcCceeCCC-CCCCcccCCcccCCCCCccccccccHhhcEEEEEEE
Confidence 5 48888 88999999999999999997 799864432 334689999999999999999999999999999999
Q ss_pred ecC--ccEEE--ecCC-CCh--hHHHHHhcC-CCcceEEEEeEEEE-----------EecCCc-eEEEEEEe
Q 009793 203 TGK--GELMT--CSAL-KNS--ELFYAALGG-LGQFGIITRARIAL-----------EPAPKR-VKWVRMLY 254 (525)
Q Consensus 203 ~~d--G~~~~--~~~~-~~~--dl~~~~~Gs-~G~lGiit~~tl~l-----------~p~p~~-~~~~~~~~ 254 (525)
++| |++++ +++. +++ ||||+++|| +|+|||||+++||+ +|.|+. .....+.|
T Consensus 184 ~~d~~G~i~~~~~~~~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~~~~~~~~~~~~p~~~~~~~~~~~~~ 255 (521)
T 2ipi_A 184 VVDASGRARKVVATSAADDPNRELWWAHTGGGGGNFGIVTRYWFRTPGATGTDPSQLLPKAPTSTLRHIVTW 255 (521)
T ss_dssp EECTTSCEEEEEEECCTTCTTHHHHHHTTTSCSSSSCEEEEEEECCSSCCSSCGGGSSCBCCSCEEEEEEEE
T ss_pred EecCCccEEEEecccccCCCCHHHHHHHhcCCCCceEEEEEEEEEeecccCCCcccccCCCCceEEEEEEEe
Confidence 977 99743 4543 444 599999985 69999999999999 998864 23344445
No 19
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=100.00 E-value=3.7e-35 Score=314.82 Aligned_cols=197 Identities=17% Similarity=0.244 Sum_probs=166.8
Q ss_pred ChhHHHHHhccccCcCCCCccEEEECCCHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCcC-CCcEEEEcCCccCcCC
Q 009793 50 DPAAIKSASSDYGNIFKENPVAVLYPSSTEDIVALVKAAYNSSVPFKIAAKGRGHSVRGQAMA-DGGVVVEMMALKNYRN 128 (525)
Q Consensus 50 ~~~~~~~~~~d~~~~~~~~p~~vv~P~~~~ev~~~v~~a~~~~~~~~v~~~g~G~~~~g~~~~-~~gvvidl~~mn~i~~ 128 (525)
++..+....+.|+..+...|.+|++|+|++||+++|++|+ ++++||++||+||++.|.+.. .+|++|||++||+
T Consensus 40 ~~~~Y~~~~~~~n~~~~~~p~~vv~p~s~~dv~~~v~~a~--~~~~~v~v~ggGh~~~g~~~~~~~gvvIdl~~l~~--- 114 (530)
T 2y3s_A 40 GDIRYEDLRRGENLRFVGDPEEIHLVGSAAEIEQVLSRAV--RSGKRVAVRSGGHCYEDFVANSDVRVVMDMSRLSA--- 114 (530)
T ss_dssp TSTTHHHHTCCSCTTCCCCCSEEEECCSHHHHHHHHHHHH--HTTCCEEEESSCCCSSSTTTCTTCCEEEECTTCCC---
T ss_pred CCccHHHHHhHhhhhccCCCCEEEecCCHHHHHHHHHHHH--HcCCcEEEECCCCCCCCCcccCCCeEEEEcccCCC---
Confidence 4556777778888778889999999999999999999997 899999999999999987764 4799999999995
Q ss_pred CCeEEEcC-CcEEEEcCCccHHHHHHHHHh-CCCcccccCCCCceeEeeecCCCCCCCCccccCcccccEEEEEEEe--c
Q 009793 129 GNGITVGS-GFYADVAGEQLWIDVLNATLE-HGLAPASWTDYLYLTVGGTLSNAGISGQTFRYGPQISNVYELDVVT--G 204 (525)
Q Consensus 129 ~~~i~id~-~~~v~v~aGv~~~~l~~~l~~-~gl~p~~~~~~~~~tvGG~~~~~g~g~~~~~yG~~~d~v~~~~vV~--~ 204 (525)
+++|+ +.+++||||++|.+|+++|.+ +|+..+. +..+.++|||+++++|+|..+.+||.++|+|+++|||+ +
T Consensus 115 ---i~~d~~~~~v~v~aG~~~~~l~~~l~~~~Gl~~~~-G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~evV~~d~ 190 (530)
T 2y3s_A 115 ---VGFDEERGAFAVEAGATLGAVYKTLFRVWGVTLPG-GACPDVGAGGHILGGGYGPLSRMHGSIVDYLHAVEVVVVDA 190 (530)
T ss_dssp ---EEEETTTTEEEEETTCBHHHHHHHHHHHHSCCCCC-CSCTTCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEEEEECT
T ss_pred ---EEEcCCCCEEEEeCCCCHHHHHHHHHhhcCeEEeC-CCCCCCCcCCCcCCCCCCcccccccchhhheeeEEEEEecC
Confidence 48888 789999999999999999985 8985333 44456789999999999999999999999999999999 5
Q ss_pred CccEE--EecCC-CCh--hHHHHHhcC-CCcceEEEEeEEEE------------EecCCc-eEEEEEEeC
Q 009793 205 KGELM--TCSAL-KNS--ELFYAALGG-LGQFGIITRARIAL------------EPAPKR-VKWVRMLYS 255 (525)
Q Consensus 205 dG~~~--~~~~~-~~~--dl~~~~~Gs-~G~lGiit~~tl~l------------~p~p~~-~~~~~~~~~ 255 (525)
||+++ ++++. +++ ||||+++|+ +|+|||||+++||+ +|.|+. .....+.|+
T Consensus 191 ~G~i~~v~~~~~~~~~d~DLf~a~rG~g~g~fGIVt~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 260 (530)
T 2y3s_A 191 SGDARTVIATREPSDPNHDLWWAHTGGGGGNFGVVVRYWLRTAEADVPPEPGRLLPRPPAEVLLNTTVWP 260 (530)
T ss_dssp TSCEEEEEEESCTTCTTHHHHHHTTTSCTTSSCEEEEEEECCCCSSCCSCGGGSSCCCCSEEEEEEEEEE
T ss_pred CCcEEEEeccccccCCChHHHHHHhcCCCCCcEEEEEEEEEeecccCccccccccCCCCceEEEEEEEec
Confidence 59984 44654 455 599999986 69999999999999 998763 344444553
No 20
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=100.00 E-value=1.3e-35 Score=318.03 Aligned_cols=201 Identities=17% Similarity=0.252 Sum_probs=168.9
Q ss_pred eeec-ChhHHHHHh-ccccCcCCCCccEEEECCCHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCcC-CCcEEEEcCC
Q 009793 46 RLHL-DPAAIKSAS-SDYGNIFKENPVAVLYPSSTEDIVALVKAAYNSSVPFKIAAKGRGHSVRGQAMA-DGGVVVEMMA 122 (525)
Q Consensus 46 ~v~~-~~~~~~~~~-~d~~~~~~~~p~~vv~P~~~~ev~~~v~~a~~~~~~~~v~~~g~G~~~~g~~~~-~~gvvidl~~ 122 (525)
.|++ ++..+.... +.|+..+...|.+||+|+|++||+++|++|+ ++++||++|||||++.|.+.+ .+|++|||++
T Consensus 33 ~v~~p~d~~Y~~~~~~~~n~~~~~~p~~vv~p~s~~dv~~~v~~a~--~~~~~~~v~ggGh~~~g~~~~~~~gvvIdl~~ 110 (523)
T 2wdx_A 33 VKVTPDDPRYLNLKLRGANSRFNGEPDYIHLVGSTQQVADAVEETV--RTGKRVAVRSGGHCFEDFVDNPDVKVIIDMSL 110 (523)
T ss_dssp EEECTTSTTHHHHHTCSSCTTCCCCCSEEEECSSHHHHHHHHHHHH--HHTCCEEEESSCCCSSSSSSSTTCCEEEECTT
T ss_pred eEECCCCcchHHHHhhhhhhcccCCCCEEEEeCCHHHHHHHHHHHH--HcCCcEEEEcCCCCCCCCccCCCCeEEEEccc
Confidence 3443 445666666 7787778889999999999999999999997 899999999999999988765 4799999999
Q ss_pred ccCcCCCCeEEEcC-CcEEEEcCCccHHHHHHHHH-hCCCcccccCCCCceeEeeecCCCCCCCCccccCcccccEEEEE
Q 009793 123 LKNYRNGNGITVGS-GFYADVAGEQLWIDVLNATL-EHGLAPASWTDYLYLTVGGTLSNAGISGQTFRYGPQISNVYELD 200 (525)
Q Consensus 123 mn~i~~~~~i~id~-~~~v~v~aGv~~~~l~~~l~-~~gl~p~~~~~~~~~tvGG~~~~~g~g~~~~~yG~~~d~v~~~~ 200 (525)
||+ +++|+ +.+++||||++|.+|+++|. ++|+..+. +..+.++|||+++++|+|..+.+||..+|+|+++|
T Consensus 111 m~~------i~~d~~~~~v~v~aG~~~~~l~~~l~~~~Gl~~~~-G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~e 183 (523)
T 2wdx_A 111 LTE------IAYDPSMNAFLIEPGNTLSEVYEKLYLGWNVTIPG-GVCGGVGVGGHICGGGYGPLSRQFGSVVDYLYAVE 183 (523)
T ss_dssp CCC------EEEETTTTEEEECTTCBHHHHHHHHHHHHSCCCCC-CCCTTCBHHHHHHHTCCCTTHHHHCCGGGGEEEEE
T ss_pred CCC------EEEcCCCCEEEEcCCCCHHHHHHHHHHhcCeEEcc-CCCCCCeeCccccCCCCCcccccccChhheEEEEE
Confidence 995 48888 88999999999999999998 59985443 44457789999999999999999999999999999
Q ss_pred EEecC--ccEEEe--cCC-CCh--hHHHHHhcC-CCcceEEEEeEEEE-----------EecCCc-eEEEEEEeC
Q 009793 201 VVTGK--GELMTC--SAL-KNS--ELFYAALGG-LGQFGIITRARIAL-----------EPAPKR-VKWVRMLYS 255 (525)
Q Consensus 201 vV~~d--G~~~~~--~~~-~~~--dl~~~~~Gs-~G~lGiit~~tl~l-----------~p~p~~-~~~~~~~~~ 255 (525)
||++| |++++. ++. +++ ||||+++|+ +|+|||||+++||+ +|.|+. .....+.|+
T Consensus 184 vV~~d~~G~v~~~~~~~~~~~~~~DLf~a~rGgg~g~~GIVt~~~l~l~~~~~~~~~~~~p~~~~~~~~~~~~~~ 258 (523)
T 2wdx_A 184 VVVVNKQGKARVIVATRERDDPHHDLWWAHTGGGGGNFGVVTKYWMRVPEDVGRNPERLLPKPPATLLTSTVTFD 258 (523)
T ss_dssp EEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCSSSSSEEEEEEECCSSCCCSCGGGSSCCCCSEEEEEEEECC
T ss_pred EEEecCCccEEEEecccccCCCChHHHHHhhccCCCCcEEEEEEEEEeecccCCCcccccCCCcccEEEEEEEec
Confidence 99955 997544 543 444 599999974 69999999999999 998864 345556664
No 21
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=100.00 E-value=1.5e-30 Score=275.30 Aligned_cols=194 Identities=16% Similarity=0.170 Sum_probs=158.0
Q ss_pred HhccccCcCCCCccEEEECCCHHHHHHHHHHHHcCCCCcEEEEecCCCCCC-----CCCcCCCcEEEEcC-CccCcCCCC
Q 009793 57 ASSDYGNIFKENPVAVLYPSSTEDIVALVKAAYNSSVPFKIAAKGRGHSVR-----GQAMADGGVVVEMM-ALKNYRNGN 130 (525)
Q Consensus 57 ~~~d~~~~~~~~p~~vv~P~~~~ev~~~v~~a~~~~~~~~v~~~g~G~~~~-----g~~~~~~gvvidl~-~mn~i~~~~ 130 (525)
..++|++.+...|.+|++|+|++||+++|++|+ ++++||+++|+|||+. ++....+|++|||+ +||+
T Consensus 18 ~~~nWs~~~~~~P~~vv~P~s~eEV~~~Vk~A~--~~~~pv~v~GgGhs~~~l~~~gG~~~~~GVvIdls~~Ln~----- 90 (540)
T 3js8_A 18 SFKNWAGDIKVDDVWTCAPRSADEVVKVANWAK--DNGYKVRARGMMHNWSPLTLAAGVSCPAVVLLDTTRYLTA----- 90 (540)
T ss_dssp EEECTTSCCEEEEEEEECCSSHHHHHHHHHHHH--HHTCEEEEECSCCCSSCSSCCTTCSSCSEEEEETTTTCCC-----
T ss_pred eeeccccccCCCccEEEEcCCHHHHHHHHHHHH--HcCCeEEEEeCCCCcccccccCCCCCCCeEEEECcCcCCC-----
Confidence 347888888999999999999999999999997 8999999999999995 43333478999995 6995
Q ss_pred eEEEcC---CcEEEEcCCccHHHHHHHHHhCCCcccccCCCCceeEeeecCCCCCCCC----------ccccCcccccEE
Q 009793 131 GITVGS---GFYADVAGEQLWIDVLNATLEHGLAPASWTDYLYLTVGGTLSNAGISGQ----------TFRYGPQISNVY 197 (525)
Q Consensus 131 ~i~id~---~~~v~v~aGv~~~~l~~~l~~~gl~p~~~~~~~~~tvGG~~~~~g~g~~----------~~~yG~~~d~v~ 197 (525)
+++|+ ..+|+||||+++.+|+++|.++|+..+..++.+.+||||+++++++|.. +.+||.++|+|+
T Consensus 91 -I~vD~~~~~~tVtV~AGv~l~~L~~~L~~~GL~l~~~~gi~~~TVGGaia~gagG~~~~~~G~~~~~g~~~G~~~D~V~ 169 (540)
T 3js8_A 91 -MSIDASGPVAKVTAQAGITMEALLTGLEKAGLGVTAAPAPGDLTLGGVLAINGHGTAIPAKGERRLAGASYGSISNLVL 169 (540)
T ss_dssp -EEEECSSSSEEEEEETTSBHHHHHHHHHHTTEECSCCCSCSCSBHHHHHHTTCCCCBCCCTTCCCCTTCCSSCGGGGEE
T ss_pred -EEECCCCCccEEEEccCCCHHHHHHHHHHcCCEEEecCCCCCeEEcccccCCCCcccccccccccccccccccHHHhEE
Confidence 37775 3799999999999999999999986443333456899999998877765 579999999999
Q ss_pred EEEEEecCcc-----EEEecCCCChhHHHHHhcCCCcceEEEEeEEEEEecCCceEEEEEEeCChhhHHH
Q 009793 198 ELDVVTGKGE-----LMTCSALKNSELFYAALGGLGQFGIITRARIALEPAPKRVKWVRMLYSDFSSFSR 262 (525)
Q Consensus 198 ~~~vV~~dG~-----~~~~~~~~~~dl~~~~~Gs~G~lGiit~~tl~l~p~p~~~~~~~~~~~~~~~~~~ 262 (525)
++++|++||+ ++++++ +++||+++..| .|+ ||||+++||++|.++....... .-+.+++.+
T Consensus 170 ~levV~adG~~~~~~i~~~s~-~~~DL~a~r~G-~G~-gIVTevtlrl~P~~~l~~~~~~-~~~~~e~l~ 235 (540)
T 3js8_A 170 SLTAVVYDKASGAYALRKFAR-NDPQIAPLLAH-VGR-SLIVEATLQAAPNQRLRCQSWF-NIPYGEMFA 235 (540)
T ss_dssp EEEEEEEETTTTEEEEEEEET-TSGGGHHHHTC-TTS-SCEEEEEEEEEECCEEEEEEEC-CSCHHHHTC
T ss_pred EEEEEcCCCCCceeeEEEeCC-CChhHHHHHhc-CCC-eEEEEEEEEEEECCceEEEEEe-cCCHHHHHh
Confidence 9999999998 777776 78999655544 577 6999999999999976433211 125555553
No 22
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=99.98 E-value=1.2e-30 Score=281.73 Aligned_cols=200 Identities=17% Similarity=0.143 Sum_probs=164.9
Q ss_pred hhHHHHHhccccCcCCCCccEEEECCCHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCc-----CCCcEEEEc-CCcc
Q 009793 51 PAAIKSASSDYGNIFKENPVAVLYPSSTEDIVALVKAAYNSSVPFKIAAKGRGHSVRGQAM-----ADGGVVVEM-MALK 124 (525)
Q Consensus 51 ~~~~~~~~~d~~~~~~~~p~~vv~P~~~~ev~~~v~~a~~~~~~~~v~~~g~G~~~~g~~~-----~~~gvvidl-~~mn 124 (525)
+..+..+.++|++.+...|.+|++|+|++||+++|++|+ ++++||+++|+|||+.+.+. +.+|++||| ++||
T Consensus 18 ~~~y~~~~~~w~~~~~~~p~~vv~P~s~~ev~~~v~~a~--~~~~~v~~~G~G~s~~~~~l~~~~~~~~gvvIdl~~~l~ 95 (561)
T 2i0k_A 18 IALFQQAYQNWSKEIMLDATWVCSPKTPQDVVRLANWAH--EHDYKIRPRGAMAGWTPLTVEKGANVEKVILADTMTHLN 95 (561)
T ss_dssp SCCEEEEEECTTSSSEEEEEEEECCSSHHHHHHHHHHHH--HHTCEEEEECCCCCCCTTSSCTTCCCTTEEEEECTTTSC
T ss_pred CHhHHHHHhhhhhccCCCCCEEEecCCHHHHHHHHHHHH--HCCCcEEEECCCCCcccccccCCCcCCCeEEEechhhCC
Confidence 334455568898888999999999999999999999997 88999999999999865333 236899999 8999
Q ss_pred CcCCCCeEEEcC---CcEEEEcCCccHHHHHHHHHhCCCcccccCCCCceeEeeecCCCCCCCC----------ccccCc
Q 009793 125 NYRNGNGITVGS---GFYADVAGEQLWIDVLNATLEHGLAPASWTDYLYLTVGGTLSNAGISGQ----------TFRYGP 191 (525)
Q Consensus 125 ~i~~~~~i~id~---~~~v~v~aGv~~~~l~~~l~~~gl~p~~~~~~~~~tvGG~~~~~g~g~~----------~~~yG~ 191 (525)
+ + ++|+ ..+|+||||++|.+|+++|.++|+..+..++.+.+||||+++++++|.. +++||.
T Consensus 96 ~-----i-~vd~~~~~~~v~v~aGv~l~~L~~~l~~~Gl~l~~~~~~~~~TvGG~i~~~~~G~~l~~gG~~~~s~~~~G~ 169 (561)
T 2i0k_A 96 G-----I-TVNTGGPVATVTAGAGASIEAIVTELQKHDLGWANLPAPGVLSIGGALAVNAHGAALPAVGQTTLPGHTYGS 169 (561)
T ss_dssp C-----E-EEECCSSSCEEEEETTSBHHHHHHHHHHTTEECSSCCSCTTCBHHHHHHTTCCCSCCCCTTCCCCTTCCSSC
T ss_pred c-----e-EecCcCCccEEEEcCCCCHHHHHHHHHHcCCcccccCCCCCcccCCCcccCCcccccccCCccccccccccc
Confidence 6 3 7774 5799999999999999999999986444555567999999998887775 788999
Q ss_pred ccccEEEEEEEecCcc---EEEecCCCChhHHHHHhcCCCcceEEEEeEEEEEecCCceEEEEEEeCChhhHHH
Q 009793 192 QISNVYELDVVTGKGE---LMTCSALKNSELFYAALGGLGQFGIITRARIALEPAPKRVKWVRMLYSDFSSFSR 262 (525)
Q Consensus 192 ~~d~v~~~~vV~~dG~---~~~~~~~~~~dl~~~~~Gs~G~lGiit~~tl~l~p~p~~~~~~~~~~~~~~~~~~ 262 (525)
++|+|+++++|++||+ +.++++. ++||+++++|. |. ||||+++||+.|.|+........+ +.+++.+
T Consensus 170 ~~d~V~~~evV~~dG~~~~~~~~~~~-~~dl~~a~~g~-G~-giIt~~tl~l~p~~~~~~~~~~~~-~~~~~l~ 239 (561)
T 2i0k_A 170 LSNLVTELTAVVWNGTTYALETYQRN-DPRITPLLTNL-GR-CFLTSVTMQAGPNFRQRCQSYTDI-PWRELFA 239 (561)
T ss_dssp GGGGEEEEEEEEECSSSEEEEEEETT-SGGGHHHHSCT-TS-SCEEEEEEECEECCEEEEEEECCS-CHHHHTC
T ss_pred HhheEEEEEEEeCCCCEEEeeeccCC-CccHHHHHhcC-CC-EEEEEEEEEEEECCceEEEEEEcc-CHHHHHH
Confidence 9999999999999999 8888764 88999988843 55 999999999999998755544333 3444443
No 23
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=99.95 E-value=1.1e-30 Score=263.35 Aligned_cols=188 Identities=18% Similarity=0.193 Sum_probs=151.0
Q ss_pred ccccccccCceeecChhHHHHHhccccCcCCCCccEEEECCCHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCcCCCc
Q 009793 36 HKLLTLDIGARLHLDPAAIKSASSDYGNIFKENPVAVLYPSSTEDIVALVKAAYNSSVPFKIAAKGRGHSVRGQAMADGG 115 (525)
Q Consensus 36 ~~l~~~~~~~~v~~~~~~~~~~~~d~~~~~~~~p~~vv~P~~~~ev~~~v~~a~~~~~~~~v~~~g~G~~~~g~~~~~~g 115 (525)
.+|+.+..+++|.+ +..+..|+++ .+...|.+|++|+|++||++++++|+ ++++|++|+|+|||+.+++.+.+|
T Consensus 20 ~~l~~~l~~~~v~~-~~~l~~~~t~---~~~~~p~~vv~P~s~eev~~~l~~a~--~~~~pv~~~GgGtnl~~~~~~~~g 93 (326)
T 1hsk_A 20 QALQQLIPNEKIKV-DEPLKRYTYT---KTGGNADFYITPTKNEEVQAVVKYAY--QNEIPVTYLGNGSNIIIREGGIRG 93 (326)
T ss_dssp HHHHHHSCGGGEEE-EEEGGGTCTT---SCCCEEEEEECCSSHHHHHHHHHHHH--HTTCCEEEESSCSSEEECTTCEEE
T ss_pred HHHHHhcCccceec-CcchHHhccC---CcCCcceEEEEcCCHHHHHHHHHHHH--HcCCCEEEECCCCccccCCCCCCe
Confidence 34555544556777 5567777654 25678999999999999999999997 899999999999999877665579
Q ss_pred EEEEcCCccCcCCCCeEEEcCCcEEEEcCCccHHHHHHHHHhCCCcccccCCCCceeEeeecCCCCCCCCccccC-cccc
Q 009793 116 VVVEMMALKNYRNGNGITVGSGFYADVAGEQLWIDVLNATLEHGLAPASWTDYLYLTVGGTLSNAGISGQTFRYG-PQIS 194 (525)
Q Consensus 116 vvidl~~mn~i~~~~~i~id~~~~v~v~aGv~~~~l~~~l~~~gl~p~~~~~~~~~tvGG~~~~~g~g~~~~~yG-~~~d 194 (525)
++|||++||+ +++| +.+++||||++|.+|++++.++|+.........++||||++++++.| || .++|
T Consensus 94 vvI~l~~m~~------i~id-~~~v~v~aGv~~~~l~~~l~~~Gl~gLe~~~~~PgtvGG~i~~nagg-----yG~~~~d 161 (326)
T 1hsk_A 94 IVISLLSLDH------IEVS-DDAIIAGSGAAIIDVSRVARDYALTGLEFACGIPGSIGGAVYMNAGA-----YGGEVKD 161 (326)
T ss_dssp EEEECTTCCC------EEEE-TTEEEEETTSBHHHHHHHHHHTTEESCGGGTTCCSBHHHHHHHTCEE-----TTEEHHH
T ss_pred EEEEeCCCCc------eEEc-CCEEEEeCCCcHHHHHHHHHHCCCccccccCCCcchhhHHHhccccc-----Cchhhhh
Confidence 9999999995 3777 68999999999999999999999843322223345999999866534 99 9999
Q ss_pred cEEEEEEEecCccEEEecCCCChhHHHHHhc----CCCcceEEEEeEEEEEec-CCc
Q 009793 195 NVYELDVVTGKGELMTCSALKNSELFYAALG----GLGQFGIITRARIALEPA-PKR 246 (525)
Q Consensus 195 ~v~~~~vV~~dG~~~~~~~~~~~dl~~~~~G----s~G~lGiit~~tl~l~p~-p~~ 246 (525)
+|+++++|++||++++++.. ++++.++. ++| ||||+++||+.|. |+.
T Consensus 162 ~v~~v~vv~~~G~i~~~~~~---~~~~gyr~~~l~s~g--gIIt~~~l~l~p~~p~~ 213 (326)
T 1hsk_A 162 CIDYALCVNEQGSLIKLTTK---ELELDYRNSIIQKEH--LVVLEAAFTLAPGKMTE 213 (326)
T ss_dssp HEEEEEEECTTSCEEEEETT---TTTCBTTBCHHHHTT--CEEEEEEEECEECCHHH
T ss_pred hEEEEEEEeCCCCEEEEChH---HcCCCccccccCCCC--EEEEEEEEEEEcCCHHH
Confidence 99999999999999999875 33333333 456 9999999999998 543
No 24
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=99.94 E-value=2e-27 Score=238.08 Aligned_cols=189 Identities=17% Similarity=0.126 Sum_probs=157.8
Q ss_pred ccccccccCceeecChhHHHHHhccccCcCCCCccEEEECCCHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCcCCCc
Q 009793 36 HKLLTLDIGARLHLDPAAIKSASSDYGNIFKENPVAVLYPSSTEDIVALVKAAYNSSVPFKIAAKGRGHSVRGQAMADGG 115 (525)
Q Consensus 36 ~~l~~~~~~~~v~~~~~~~~~~~~d~~~~~~~~p~~vv~P~~~~ev~~~v~~a~~~~~~~~v~~~g~G~~~~g~~~~~~g 115 (525)
.+|+.+..+++|.++ ..+..|++ | .+...|.++++|+|++||+++|++|+ ++++|++++|+|||+.+...+.+|
T Consensus 26 ~~L~~~lg~~~v~~~-~~l~~~tt-~--~igg~p~~vv~P~s~eev~~~v~~a~--~~~~pv~v~GgGsnl~~~~~~~~g 99 (322)
T 3tx1_A 26 NNLQTKFPHIAIKLN-EPLSKYTY-T--KTGGAADVFVMPKTIEEAQEVVAYCH--QNKIPLTILGNGSNLIIKDGGIRG 99 (322)
T ss_dssp CCHHHHCTTSEEEEE-EEGGGGST-T--SCCCEEEEEEECSSHHHHHHHHHHHH--HTTCCEEEESCCTTEEECTTCEEE
T ss_pred HHHHHhcCCcceEcC-cchHHhcc-C--CcCceeeEEEEeCCHHHHHHHHHHHH--HcCCcEEEECCccCCCcCCCCCCe
Confidence 466666667788888 46778876 3 36788999999999999999999998 899999999999999866544579
Q ss_pred EEEEcCCccCcCCCCeEEEcCCcEEEEcCCccHHHHHHHHHhCCCcccccCCCCceeEeeecCCCCCCCCcccc-Ccccc
Q 009793 116 VVVEMMALKNYRNGNGITVGSGFYADVAGEQLWIDVLNATLEHGLAPASWTDYLYLTVGGTLSNAGISGQTFRY-GPQIS 194 (525)
Q Consensus 116 vvidl~~mn~i~~~~~i~id~~~~v~v~aGv~~~~l~~~l~~~gl~p~~~~~~~~~tvGG~~~~~g~g~~~~~y-G~~~d 194 (525)
++|||++||+ +++| +.+++|+||++|.+|++++.++|+.++++.+..++||||++++++.| | |.++|
T Consensus 100 vvI~l~~~~~------I~~d-~~~v~v~aG~~~~~l~~~l~~~Gl~Gle~~~giPgTVGGav~~NaGg-----yGg~~~d 167 (322)
T 3tx1_A 100 VILHLDLLQT------IERN-NTQIVAMSGAKLIDTAKFALNESLSGLEFACGIPGSIGGALHMNAGA-----YGGEISD 167 (322)
T ss_dssp EEEECTTCCC------EEEE-TTEEEEETTSBHHHHHHHHHHTTEESCGGGTTCCSBHHHHHHHTCEE-----TTEEHHH
T ss_pred EEEECCCCCc------EEEC-CCEEEEecCcCHHHHHHHHHHcCCcccccCCCCcchhHHHHHhCccC-----cccchHh
Confidence 9999999996 3466 67999999999999999999999987777777789999999855433 7 68899
Q ss_pred cEEEEEEEecCccEEEecCCCChhHHHHHhcCC-C-cceEEEEeEEEEEecCC
Q 009793 195 NVYELDVVTGKGELMTCSALKNSELFYAALGGL-G-QFGIITRARIALEPAPK 245 (525)
Q Consensus 195 ~v~~~~vV~~dG~~~~~~~~~~~dl~~~~~Gs~-G-~lGiit~~tl~l~p~p~ 245 (525)
+|+++++|++||++++++.. |+++.++++. | ..||||+++||+.|.|+
T Consensus 168 ~v~~vevV~~~G~i~~~~~~---~~~~~yR~s~~g~~~~IIt~~tl~L~p~~~ 217 (322)
T 3tx1_A 168 VLEAATVLTQTGELKKLKRS---ELKAAYRFSTIAEKNYIVLDATFSLALEEK 217 (322)
T ss_dssp HEEEEEEECTTSCEEEEEGG---GCC--CC-CTTTGGGCEEEEEEEECEECCH
T ss_pred hEEEEEEEcCCCCEEEechH---HcCcchhhcccCCCCEEEEEEEEEEEeCCH
Confidence 99999999999999999763 7777777764 3 46899999999999985
No 25
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=99.90 E-value=2.2e-24 Score=218.10 Aligned_cols=165 Identities=15% Similarity=0.118 Sum_probs=143.4
Q ss_pred CCCCccEEEECCCHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCcCCCcEEEEcCCccCcCCCCeEEEcC-CcEEEEc
Q 009793 65 FKENPVAVLYPSSTEDIVALVKAAYNSSVPFKIAAKGRGHSVRGQAMADGGVVVEMMALKNYRNGNGITVGS-GFYADVA 143 (525)
Q Consensus 65 ~~~~p~~vv~P~~~~ev~~~v~~a~~~~~~~~v~~~g~G~~~~g~~~~~~gvvidl~~mn~i~~~~~i~id~-~~~v~v~ 143 (525)
+...|.++++|+|++||+++|++|+ ++++|++++|+|||+.+... .+|++|+++ |++| .+.-++ +.+++|+
T Consensus 27 igg~a~~vv~p~s~eel~~~v~~a~--~~~ipv~vlGgGSNll~~d~-~~GvVI~l~-~~~i----~v~~~~~~~~v~v~ 98 (357)
T 3i99_A 27 IEQLAAQLVVAESIDDLKALYCSAE--WASLPKLIIGKGSNMLFTCH-YTGMIVVNR-LNGI----EHQQDDDYHRLHVA 98 (357)
T ss_dssp CSCEEEEEEEECSHHHHHHHHSSST--TTTSCEEEESSCTTEEECSC-EEEEEEEEC-CCCE----EEEECSSEEEEEEE
T ss_pred CCccceEEEEECCHHHHHHHHHHHH--HcCCCEEEECCCcCcccCCC-CCeEEEEcC-CCce----EEeccCCceEEEEe
Confidence 5788999999999999999999996 99999999999999976665 589999998 9863 222233 5699999
Q ss_pred CCccHHHHHHHHHhCCCcccccCCCCceeEeeecCCCCCCCCccccCc-ccccEEEEEEEec-CccEEEecCCCChhHHH
Q 009793 144 GEQLWIDVLNATLEHGLAPASWTDYLYLTVGGTLSNAGISGQTFRYGP-QISNVYELDVVTG-KGELMTCSALKNSELFY 221 (525)
Q Consensus 144 aGv~~~~l~~~l~~~gl~p~~~~~~~~~tvGG~~~~~g~g~~~~~yG~-~~d~v~~~~vV~~-dG~~~~~~~~~~~dl~~ 221 (525)
||++|.+|.+++.++||.+.++.+..++||||+++.|. | .||. +.|+|.++++|++ ||++++++.. |+++
T Consensus 99 AG~~~~~l~~~a~~~Gl~GlE~l~gIPGtVGGav~~Na-G----aYG~e~~d~v~~vevv~~~~G~i~~~~~~---dl~f 170 (357)
T 3i99_A 99 GGEDWPSLVSWCVEQGIGGLENLALIPGCAGSAPIQNI-G----AYGVEFKDVCDYVEYLCLETGTVKRLTME---ECQF 170 (357)
T ss_dssp TTSBHHHHHHHHHHTTCTTCGGGTTCCSBGGGTTTTTC-E----ETTEEGGGTEEEEEEEETTTTEEEEEETG---GGCC
T ss_pred CCCcHHHHHHHHHHcCCcCccccCCCCchhHHHHHhch-h----hhhhhHHhhEeEEEEEECCCCcEEEEeHH---HcCc
Confidence 99999999999999999989888888999999998553 2 4997 8999999999999 9999998854 8888
Q ss_pred HHhcCC-----CcceEEEEeEEEEEecCC
Q 009793 222 AALGGL-----GQFGIITRARIALEPAPK 245 (525)
Q Consensus 222 ~~~Gs~-----G~lGiit~~tl~l~p~p~ 245 (525)
.+++|. |++||||+++|++.|.++
T Consensus 171 ~YR~s~~~~~~g~~gIIt~v~f~L~p~~~ 199 (357)
T 3i99_A 171 GYRDSIFKHQLYQKAVVTAVGLKFAKAWQ 199 (357)
T ss_dssp BTTBCGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred ccccccCCCccCCCEEEEEEEEEEEeCCc
Confidence 888763 489999999999999875
No 26
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=99.89 E-value=4.4e-23 Score=208.10 Aligned_cols=165 Identities=15% Similarity=0.121 Sum_probs=142.4
Q ss_pred CCCCccEEEECCCHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCcCCCcEEEEcCCccCcCCCCeEEEcC-C-cEEEE
Q 009793 65 FKENPVAVLYPSSTEDIVALVKAAYNSSVPFKIAAKGRGHSVRGQAMADGGVVVEMMALKNYRNGNGITVGS-G-FYADV 142 (525)
Q Consensus 65 ~~~~p~~vv~P~~~~ev~~~v~~a~~~~~~~~v~~~g~G~~~~g~~~~~~gvvidl~~mn~i~~~~~i~id~-~-~~v~v 142 (525)
+...|.+++.|+|++|+++++++|+ ++++|++++|+|||+.+... .+|++|+++ |++ +..++. + .+++|
T Consensus 11 igg~a~~~v~p~s~eel~~~l~~a~--~~~~pv~vlGgGSnll~~d~-~~GvVI~l~-~~~-----i~~i~~~~~~~v~v 81 (340)
T 1uxy_A 11 IDHNAQHIVCAEDEQQLLNAWQYAT--AEGQPVLILGEGSNVLFLED-YRGTVIINR-IKG-----IEIHDEPDAWYLHV 81 (340)
T ss_dssp CCCBEEEEEEESSHHHHHHHHHHHH--HTTCCEEEESSCTTEEECSC-EEEEEEEEC-CCC-----EEEEECSSEEEEEE
T ss_pred CCccccEEEEeCCHHHHHHHHHHHH--HcCCCEEEECCCcCCcccCC-CCeEEEEcc-CCC-----cEEEecCCCeEEEE
Confidence 5678999999999999999999997 89999999999999876654 489999996 886 344544 5 69999
Q ss_pred cCCccHHHHHHHHHhCCCcccccCCCCceeEeeecCCCCCCCCccccCc-ccccEEEEEEEec-CccEEEecCCCChhHH
Q 009793 143 AGEQLWIDVLNATLEHGLAPASWTDYLYLTVGGTLSNAGISGQTFRYGP-QISNVYELDVVTG-KGELMTCSALKNSELF 220 (525)
Q Consensus 143 ~aGv~~~~l~~~l~~~gl~p~~~~~~~~~tvGG~~~~~g~g~~~~~yG~-~~d~v~~~~vV~~-dG~~~~~~~~~~~dl~ 220 (525)
+||++|.+|.+++.++||.++++.+..++||||++..|. |. ||. ++|+|.++++|++ ||++++++.. |++
T Consensus 82 gAG~~~~~l~~~~~~~Gl~Gle~~~gIPGtVGGa~~~Na-Ga----yG~ei~d~v~~v~vv~~~~G~v~~~~~~---d~~ 153 (340)
T 1uxy_A 82 GAGENWHRLVKYTLQEGMPGLENLALIPGCVGSSPIQNI-GA----YGVELQRVCAYVDSVELATGKQVRLTAK---ECR 153 (340)
T ss_dssp ETTSBHHHHHHHHHHTTCCSCGGGTTCCSBGGGTTTTTC-EE----TTEEGGGTEEEEEEEETTTTEEEEEETG---GGT
T ss_pred ecCCCHHHHHHHHHHCCCCccccccCCccchhHHHHhcc-cc----chhhHHhheeEEEEEECCCCcEEEEeHH---Hhc
Confidence 999999999999999999988888888899999998443 22 995 8999999999997 9999999863 888
Q ss_pred HHHhcCC-----CcceEEEEeEEEEEecCCc
Q 009793 221 YAALGGL-----GQFGIITRARIALEPAPKR 246 (525)
Q Consensus 221 ~~~~Gs~-----G~lGiit~~tl~l~p~p~~ 246 (525)
+.+++|. |++||||+++|++.|.|+.
T Consensus 154 ~gYR~s~~~~~~~~~gIVt~v~~~L~~~~~~ 184 (340)
T 1uxy_A 154 FGYRDSIFKHEYQDRFAIVAVGLRLPKEWQP 184 (340)
T ss_dssp CBTTBCGGGTTTTTTEEEEEEEEEEESSCCC
T ss_pred cccCcCccCCcCCCCEEEEEEEEEEEcCCCc
Confidence 8888763 4799999999999998743
No 27
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=99.85 E-value=5e-22 Score=193.56 Aligned_cols=160 Identities=16% Similarity=0.121 Sum_probs=134.9
Q ss_pred HHHHhccccCcCCCCccEEEECCCHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCcCCC-cEEEEcCCccCcCCCCeE
Q 009793 54 IKSASSDYGNIFKENPVAVLYPSSTEDIVALVKAAYNSSVPFKIAAKGRGHSVRGQAMADG-GVVVEMMALKNYRNGNGI 132 (525)
Q Consensus 54 ~~~~~~d~~~~~~~~p~~vv~P~~~~ev~~~v~~a~~~~~~~~v~~~g~G~~~~g~~~~~~-gvvidl~~mn~i~~~~~i 132 (525)
+..|++ | .+...|. +++|+|++||+++| ++|++++|+|||+.+...+.. |++|++++||+|
T Consensus 11 l~~~tt-~--~igg~a~-vv~p~s~edv~~~v--------~ipv~v~GgGsnll~~d~~~~~GvVI~l~~~~~I------ 72 (268)
T 2gqt_A 11 LKDYTT-L--GVGGPAE-LWTVETREELKRAT--------EAPYRVLGNGSNLLVLDEGVPERVIRLAGEFQTY------ 72 (268)
T ss_dssp GGGGSS-S--CCCCEEE-EEEECSHHHHHHHT--------TSCEEECSSSSSEEECTTCCSSEEEEECGGGGCB------
T ss_pred hHHhcc-c--ccCcceE-EEEeCCHHHHHHHh--------CCCeEEcCCCcCceecCCCcCCeEEEEcCCCCCc------
Confidence 445544 4 2566778 99999999999998 689999999999987776554 999999999963
Q ss_pred EEcCCcEEEEcCCccHHHHHHHHHhCCCcccccCCCCceeEeeecCCCCCCCCccccC-cccccEEEEEEEecCccEEEe
Q 009793 133 TVGSGFYADVAGEQLWIDVLNATLEHGLAPASWTDYLYLTVGGTLSNAGISGQTFRYG-PQISNVYELDVVTGKGELMTC 211 (525)
Q Consensus 133 ~id~~~~v~v~aGv~~~~l~~~l~~~gl~p~~~~~~~~~tvGG~~~~~g~g~~~~~yG-~~~d~v~~~~vV~~dG~~~~~ 211 (525)
++| + +|+||++|.+|.+++.++||.++++.+..++||||+++.|. | .|| .++|+|.++++| +||+++++
T Consensus 73 ~vd-~---~v~aG~~~~~l~~~~~~~Gl~Gle~~~giPGtvGGav~~Na-G----ayG~e~~d~v~~v~vv-~~G~v~~~ 142 (268)
T 2gqt_A 73 DLK-G---WVGAGTLLPLLVQEAARAGLSGLEGLLGIPAQVGGAVKMNA-G----TRFGEMADALEAVEVF-HDGAFHVY 142 (268)
T ss_dssp CTT-S---EEETTSBHHHHHHHHHHTTEESCGGGTTCCCBHHHHHHTTC-E----ETTEEGGGGEEEEEEE-ETTEEEEE
T ss_pred EEc-C---EEECCCCHHHHHHHHHHcCCcCCccccCccchhHHHHHhcc-c----cCchhHHhheeEEEEE-CCCcEEEE
Confidence 455 4 99999999999999999999999998888899999998554 2 399 689999999999 99999999
Q ss_pred cCCCChhHHHHHhcCCC-cceEEEEeEEEEEecC
Q 009793 212 SALKNSELFYAALGGLG-QFGIITRARIALEPAP 244 (525)
Q Consensus 212 ~~~~~~dl~~~~~Gs~G-~lGiit~~tl~l~p~p 244 (525)
+.. |+++.+++|.- .-||||+++||+.|.+
T Consensus 143 ~~~---~l~~~YR~s~~~~~gIVt~~~~~L~~~~ 173 (268)
T 2gqt_A 143 CPE---ELGFGYRKSHLPPGGIVTRVRLKLKERP 173 (268)
T ss_dssp CGG---GSCCBTTBCCCSTTCEEEEEEECCEECC
T ss_pred chH---HcccccCCCCcCCCceEEEEEEEEEeCC
Confidence 864 88999988751 1149999999999985
No 28
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus}
Probab=99.82 E-value=1.6e-20 Score=177.87 Aligned_cols=119 Identities=20% Similarity=0.257 Sum_probs=102.9
Q ss_pred EEcC-CcEEEEcCCccHHHHHHHHHhCCCc-ccccCCCCceeEeeecCCCCCCCCccccCcccccEEEEEEEecCccEEE
Q 009793 133 TVGS-GFYADVAGEQLWIDVLNATLEHGLA-PASWTDYLYLTVGGTLSNAGISGQTFRYGPQISNVYELDVVTGKGELMT 210 (525)
Q Consensus 133 ~id~-~~~v~v~aGv~~~~l~~~l~~~gl~-p~~~~~~~~~tvGG~~~~~g~g~~~~~yG~~~d~v~~~~vV~~dG~~~~ 210 (525)
++|+ +.+++||||+++.+|++++.++|++ |..+++... ||||+++++++| .+||.. |+|+++++|++||++++
T Consensus 2 ~vd~~~~~v~V~aGv~l~~L~~~l~~~Gl~~~~~Pg~~~~-tVGG~v~~nagG---~~yG~~-D~V~~vevV~~dG~i~~ 76 (219)
T 2yvs_A 2 EVHAADQYLVAPGEADLLEVHARLAGTGLFPPFPPVELPG-GVGGLVARGGFA---QTFFFP-AEVLGLTFRTPKGRRVR 76 (219)
T ss_dssp EEETTTTEEEEETTCCHHHHHHHHTTTTEECSSCSEECTT-HHHHHHHTTCSS---BSSCGG-GGEEEEEEECTTSCEEE
T ss_pred eEcCCCCEEEEcCCCcHHHHHHHHHHcCCEEeccCCCCCC-chhheeccCccc---ccCCCc-cEEEEEEEEeCCCCEEE
Confidence 5677 8899999999999999999999985 555554444 999999988766 889999 99999999999999999
Q ss_pred ecCC-----CChhHHHHHhcCCCcceEEEEeEEEEEecCCceEEEEEEeCC
Q 009793 211 CSAL-----KNSELFYAALGGLGQFGIITRARIALEPAPKRVKWVRMLYSD 256 (525)
Q Consensus 211 ~~~~-----~~~dl~~~~~Gs~G~lGiit~~tl~l~p~p~~~~~~~~~~~~ 256 (525)
++.. .++||+++++||+|+|||||+++||++|.|+....+.+.+.+
T Consensus 77 ~~~~~~kn~~gydl~~~~~Gs~G~lGIVt~~tlrl~p~~~~~~~~~~~~~~ 127 (219)
T 2yvs_A 77 AGGVVVKNVQGYDLVRLFVGSFGLLGRAEEVVLRLRPGRAQAFLRRPFSGS 127 (219)
T ss_dssp EECSSCSSSSCSCHHHHHTTCTTTTCEEEEEEEECEECSEEEEEEEECCSS
T ss_pred ECCccccCCCCcchHHHhccCCCceEEEEEEEEEEEECCcccEEEEEecCC
Confidence 9864 358999999999999999999999999999887666665544
No 29
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C*
Probab=98.22 E-value=9.1e-07 Score=87.06 Aligned_cols=153 Identities=16% Similarity=0.161 Sum_probs=97.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC---CcCCCcEEEEcCCccCcCCCCeEEEcCCcEEEEcCC
Q 009793 69 PVAVLYPSSTEDIVALVKAAYNSSVPFKIAAKGRGHSVRGQ---AMADGGVVVEMMALKNYRNGNGITVGSGFYADVAGE 145 (525)
Q Consensus 69 p~~vv~P~~~~ev~~~v~~a~~~~~~~~v~~~g~G~~~~g~---~~~~~gvvidl~~mn~i~~~~~i~id~~~~v~v~aG 145 (525)
+-.+++|+|.+|+.++++.. +.+..+.||||++.-. .....+++||++++..+ ..++.+ +..++++||
T Consensus 5 ~~~~~~P~s~~ea~~ll~~~-----~~~~~ilaGGT~ll~~~~~~~~~~~~lIdl~~i~eL---~~i~~~-~~~l~iGA~ 75 (287)
T 1ffv_C 5 RFEYHAPKSVGEAVALLGQL-----GSDAKLLAGGHSLLPMMKLRFAQPEHLIDINRIPEL---RGIREE-GSTVVIGAM 75 (287)
T ss_dssp CCEEECCSSHHHHHHHHHHH-----GGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGG---CCEEEE-TTEEEEETT
T ss_pred cceEECCCCHHHHHHHHHhc-----CCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhh---cceEec-CCEEEEccC
Confidence 45689999999999999864 2356777999996431 11236899999854221 245655 667999999
Q ss_pred ccHHHHHHH-HHhCCCcc----cc-cCCC---CceeEeeecCCCCCCCCccccCcccccEE-------EEEEEecCccEE
Q 009793 146 QLWIDVLNA-TLEHGLAP----AS-WTDY---LYLTVGGTLSNAGISGQTFRYGPQISNVY-------ELDVVTGKGELM 209 (525)
Q Consensus 146 v~~~~l~~~-l~~~gl~p----~~-~~~~---~~~tvGG~~~~~g~g~~~~~yG~~~d~v~-------~~~vV~~dG~~~ 209 (525)
+++.+|.+. +.++++-. .. ..+. +.+||||+++++.. ..|.+. .+++..++|+ .
T Consensus 76 ~tl~~l~~~~~~~~~~~~L~~a~~~~a~~qiRN~gTvGGni~~~~~---------~~D~~~~l~Al~A~v~~~~~~G~-r 145 (287)
T 1ffv_C 76 TVENDLISSPIVQARLPLLAEAAKLIADPQVRNRGTIGGDIAHGDP---------GNDHPALSIAVEAHFVLEGPNGR-R 145 (287)
T ss_dssp CBHHHHHHCHHHHHHCHHHHHHGGGSSCTTGGGTCBHHHHHHTCCT---------TCSHHHHHHHTTCEEEEEETTEE-E
T ss_pred CcHHHHhhChHHHHHhHHHHHHHHHhCCHHHhcceechhhhccCCC---------cHHHHHHHHHcCcEEEEEcCCce-E
Confidence 999999863 33333311 11 1221 25899999997742 344433 6888899993 3
Q ss_pred EecCCCChhHHHHHhcCC-CcceEEEEeEEEEEec
Q 009793 210 TCSALKNSELFYAALGGL-GQFGIITRARIALEPA 243 (525)
Q Consensus 210 ~~~~~~~~dl~~~~~Gs~-G~lGiit~~tl~l~p~ 243 (525)
+.... |++..++-+. ..--|||++++.+.+.
T Consensus 146 ~i~~~---df~~g~~~t~l~~~eii~~i~ip~~~~ 177 (287)
T 1ffv_C 146 TVPAD---GFFLGTYMTLLEENEVMVEIRVPAFAQ 177 (287)
T ss_dssp EEEST---TTEEETTEESCCTTCEEEEEEEECCCT
T ss_pred EEEHH---HHhcCcccccCCCCCEEEEEEecCCCC
Confidence 44332 4444433211 1125899999987653
No 30
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=97.38 E-value=4.8e-05 Score=79.45 Aligned_cols=151 Identities=11% Similarity=0.038 Sum_probs=94.0
Q ss_pred EEEECCCHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC---CcCCCcEEEEcCCccCcCCCCeEEEcCCcEEEEcCCcc
Q 009793 71 AVLYPSSTEDIVALVKAAYNSSVPFKIAAKGRGHSVRGQ---AMADGGVVVEMMALKNYRNGNGITVGSGFYADVAGEQL 147 (525)
Q Consensus 71 ~vv~P~~~~ev~~~v~~a~~~~~~~~v~~~g~G~~~~g~---~~~~~gvvidl~~mn~i~~~~~i~id~~~~v~v~aGv~ 147 (525)
..++|+|.+|+.++++.. . +. .+.+|||++.-. .....+++||++++..+ ..++.+ +..++++||++
T Consensus 179 ~y~~P~sl~ea~~ll~~~---~-~a--~ilaGGT~L~~~~k~~~~~~~~lIdl~~i~eL---~~I~~~-~~~l~IGA~vt 248 (462)
T 2w3s_A 179 PAFLPETSDALADWYLAH---P-EA--TLIAGGTDVSLWVTKALRDLPEVAFLSHCKDL---AQIRET-PDGYGIGAGVT 248 (462)
T ss_dssp CCBCCSSHHHHHHHHHHC---T-TC--EEESSCTTTTHHHHTSCCCCCSEEECTTCGGG---SCEEEE-TTEEEEETTCB
T ss_pred EEEecCCHHHHHHHHhhC---C-CC--EEEeCCchhhhhhhccCCCCCEEEEcCCChhh---CcEEEc-CCEEEEccCCc
Confidence 467999999999998753 2 33 455999998532 12236899999984321 245655 56799999999
Q ss_pred HHHHHHHHHhCCCccc----ccCCCCc----eeEeeecCCCCCCCCccccCcccccEE----EEEEEecCccEEEecCCC
Q 009793 148 WIDVLNATLEHGLAPA----SWTDYLY----LTVGGTLSNAGISGQTFRYGPQISNVY----ELDVVTGKGELMTCSALK 215 (525)
Q Consensus 148 ~~~l~~~l~~~gl~p~----~~~~~~~----~tvGG~~~~~g~g~~~~~yG~~~d~v~----~~~vV~~dG~~~~~~~~~ 215 (525)
+.+|.+.+. ..+-.. ....++. +||||+++++.. .+.+..-++ .+++..++|+. +...
T Consensus 249 l~~l~~~l~-~~~p~L~~a~~~ia~~qIRN~gTvGGNl~~~sp------~sD~~~~L~ALdA~v~l~~~~G~R-~vp~-- 318 (462)
T 2w3s_A 249 IAALRAFAE-GPHPALAGLLRRFASEQVRQVATIGGNIANGSP------IGDGPPALIAMGASLTLRRGQERR-RMPL-- 318 (462)
T ss_dssp HHHHHHHHT-TTCHHHHHHHTTSSCHHHHTTCBHHHHHHHTCT------TCSHHHHHHHTTCEEEEEBTTBCC-CCBG--
T ss_pred HHHHHHHHH-HHhHHHHHHHHHhCChhheeeEEcccccccCCC------cchHHHHHHHcCCEEEEEeCCceE-EEEH--
Confidence 999998843 333111 2222233 799999997653 344444455 77888888842 2221
Q ss_pred ChhHHHHHhcCC-CcceEEEEeEEEEEe
Q 009793 216 NSELFYAALGGL-GQFGIITRARIALEP 242 (525)
Q Consensus 216 ~~dl~~~~~Gs~-G~lGiit~~tl~l~p 242 (525)
.|+|..++-.. ..=-||+++.|...+
T Consensus 319 -~dF~~g~~~t~L~~~Eii~~i~iP~~~ 345 (462)
T 2w3s_A 319 -EDFFLEYRKQDRRPGEFVESVTLPKSA 345 (462)
T ss_dssp -GGGEEETTEESCCTTCEEEEEEEESCC
T ss_pred -HHhhcccccccCCCCcEEEEEEEecCC
Confidence 14443332211 112589999987654
No 31
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C*
Probab=97.35 E-value=8.6e-05 Score=72.93 Aligned_cols=152 Identities=18% Similarity=0.179 Sum_probs=92.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC---CcCCCcEEEEcCCccCcCCCCeEEEcCCcEEEEcCC
Q 009793 69 PVAVLYPSSTEDIVALVKAAYNSSVPFKIAAKGRGHSVRGQ---AMADGGVVVEMMALKNYRNGNGITVGSGFYADVAGE 145 (525)
Q Consensus 69 p~~vv~P~~~~ev~~~v~~a~~~~~~~~v~~~g~G~~~~g~---~~~~~gvvidl~~mn~i~~~~~i~id~~~~v~v~aG 145 (525)
+-.+++|+|.+|+.++++.. +-+..+.+|||++.-. .....+++||++++..+ ..++.+ +..++++|+
T Consensus 5 ~~~~~~P~sl~ea~~ll~~~-----~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL---~~I~~~-~~~l~IGA~ 75 (288)
T 1n62_C 5 SFDYHRPKSIADAVALLTKL-----GEDARPLAGGHSLIPIMKTRLATPEHLVDLRDIGDL---VGIREE-GTDVVIGAM 75 (288)
T ss_dssp CCEEECCSSHHHHHHHHHHH-----GGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGG---SCEEEE-TTEEEEETT
T ss_pred ceEEECcCCHHHHHHHHHhc-----CCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhh---cceEec-CCEEEEccC
Confidence 45688999999999998643 1234566999996321 11236899999875422 245655 678999999
Q ss_pred ccHHHHHH--HHHhCC--Cc--ccccCC---CCceeEeeecCCCCCCCCccccCcccccEE-------EEEEEecCccEE
Q 009793 146 QLWIDVLN--ATLEHG--LA--PASWTD---YLYLTVGGTLSNAGISGQTFRYGPQISNVY-------ELDVVTGKGELM 209 (525)
Q Consensus 146 v~~~~l~~--~l~~~g--l~--p~~~~~---~~~~tvGG~~~~~g~g~~~~~yG~~~d~v~-------~~~vV~~dG~~~ 209 (525)
+++.+|.+ .+.++- +. .....+ .+.+||||+++++. +..|.+. .+++..++|+.
T Consensus 76 ~t~~~l~~~~~~~~~~p~L~~a~~~ia~~qiRN~gTiGGnl~~a~---------p~sD~~~~L~Al~A~v~l~~~~G~r- 145 (288)
T 1n62_C 76 TTQHALIGSDFLAAKLPIIRETSLLIADPQIRYMGTIGGNAANGD---------PGNDMPALMQCLGAAYELTGPEGAR- 145 (288)
T ss_dssp CBHHHHHHCHHHHHHCHHHHHHHTTSSCHHHHHHCBHHHHHHSCC---------TTCSHHHHHHHHTCEEEEEETTEEE-
T ss_pred CcHHHHhcChHHHHHHHHHHHHHHHhCCHHHHccccccchhccCC---------CchHHHHHHHHhCcEEEEEeCCccE-
Confidence 99999985 444321 10 001111 12479999999773 2455543 67778888842
Q ss_pred EecCCCChhHHHHHhc-CCCcceEEEEeEEEEEe
Q 009793 210 TCSALKNSELFYAALG-GLGQFGIITRARIALEP 242 (525)
Q Consensus 210 ~~~~~~~~dl~~~~~G-s~G~lGiit~~tl~l~p 242 (525)
+..-. |+|....- ....--|||++.+...+
T Consensus 146 ~v~~~---df~~g~~~t~l~~~eil~~i~ip~~~ 176 (288)
T 1n62_C 146 IVAAR---DYYQGAYFTAIEPGELLTAIRIPVPP 176 (288)
T ss_dssp EEEHH---HHEEETTEESCCTTCEEEEEEEECCC
T ss_pred EEEHH---HHhcCcccccCCCCCEEEEEEeCCCC
Confidence 22211 33322211 11122589999997654
No 32
>3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B*
Probab=96.79 E-value=0.00078 Score=66.58 Aligned_cols=154 Identities=13% Similarity=0.039 Sum_probs=93.1
Q ss_pred CCCccEEEECCCHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC---CcCCCcEEEEcCCccCcCCCCeEEEcCCcEEEE
Q 009793 66 KENPVAVLYPSSTEDIVALVKAAYNSSVPFKIAAKGRGHSVRGQ---AMADGGVVVEMMALKNYRNGNGITVGSGFYADV 142 (525)
Q Consensus 66 ~~~p~~vv~P~~~~ev~~~v~~a~~~~~~~~v~~~g~G~~~~g~---~~~~~gvvidl~~mn~i~~~~~i~id~~~~v~v 142 (525)
.+.+...++|+|.+|+.++++.. .+. .+.+|||++.-. .......+||++++..+ ..++.+ +..+++
T Consensus 7 ~g~~~~y~~P~sl~ea~~ll~~~----~~a--~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL---~~I~~~-~~~l~I 76 (305)
T 3nvz_B 7 EGERVTWIQASTLKELLDLKAQH----PEA--KLVVGNTEIGIEMKFKNQLFPMIICPAWIPEL---NAVEHG-PEGISF 76 (305)
T ss_dssp ECSSCEEEECCSHHHHHHHHHHC----TTC--EECSSCTTHHHHHHHSCCCCSEEEECTTCGGG---GCEEEC-SSEEEE
T ss_pred cCCCeEEEccCCHHHHHHHHHhC----CCC--EEEECccHHHHHHhcCCCCCCEEEECCCChhh---cceEEC-CCeEEE
Confidence 34567799999999999987532 233 456999997522 11236789999986532 356666 678999
Q ss_pred cCCccHHHHHHHHHhC-------------CCc-----ccccCCCCceeEeeecCCCCCCCCccccCcccccE---E----
Q 009793 143 AGEQLWIDVLNATLEH-------------GLA-----PASWTDYLYLTVGGTLSNAGISGQTFRYGPQISNV---Y---- 197 (525)
Q Consensus 143 ~aGv~~~~l~~~l~~~-------------gl~-----p~~~~~~~~~tvGG~~~~~g~g~~~~~yG~~~d~v---~---- 197 (525)
+|++++.++.+.+.++ .+. .-++.-.+.+||||+++++.. ..|.. +
T Consensus 77 GA~vt~~~l~~~~~~~~~~~p~~~~~~~p~L~~a~~~ia~~qiRN~aTiGGNl~~a~p---------~sD~~~~L~AldA 147 (305)
T 3nvz_B 77 GAACALSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASP---------ISDLNPVFMASGT 147 (305)
T ss_dssp ETTCBHHHHHHHHHHHHHHSCGGGCHHHHHHHHHHTTSSCHHHHTTCBHHHHHHHCCT---------TCSSHHHHHHHTC
T ss_pred ccCCcHHHHHHHHHhhhcccchhhhhhhHHHHHHHHHhCCHHHhCeeechheeCCCCC---------chHHHHHHHHcCC
Confidence 9999999999876532 010 111111136799999997642 23432 2
Q ss_pred EEEEEecCccEEEecCCCChhHHHHHhcC-CCcceEEEEeEEEEE
Q 009793 198 ELDVVTGKGELMTCSALKNSELFYAALGG-LGQFGIITRARIALE 241 (525)
Q Consensus 198 ~~~vV~~dG~~~~~~~~~~~dl~~~~~Gs-~G~lGiit~~tl~l~ 241 (525)
.+++..++|+.. ..-. .|+|....-. ...-=|||++.+...
T Consensus 148 ~v~l~~~~G~R~-vp~~--~df~~g~~~t~l~~~Eil~~I~iP~~ 189 (305)
T 3nvz_B 148 KLTIVSRGTRRT-VPMD--HTFFPSYRKTLLGPEEILLSIEIPYS 189 (305)
T ss_dssp EEEEEETTEEEE-EECC--GGGCCSTTCCSCCTTCEEEEEEEECC
T ss_pred EEEEEcCCCcEE-EEee--hHhhcCcccccCCCCcEEEEEEecCC
Confidence 677778888532 2211 0233221110 011138999888543
No 33
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3
Probab=96.42 E-value=0.0028 Score=62.02 Aligned_cols=151 Identities=13% Similarity=0.128 Sum_probs=90.5
Q ss_pred CccEEEECCCHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC---CcCCCcEEEEcCCccCcCCCCeEEEcCCcEEEEcC
Q 009793 68 NPVAVLYPSSTEDIVALVKAAYNSSVPFKIAAKGRGHSVRGQ---AMADGGVVVEMMALKNYRNGNGITVGSGFYADVAG 144 (525)
Q Consensus 68 ~p~~vv~P~~~~ev~~~v~~a~~~~~~~~v~~~g~G~~~~g~---~~~~~gvvidl~~mn~i~~~~~i~id~~~~v~v~a 144 (525)
.|--+++|+|.+|+.++++. ..+..+ .+|||++.-. .......+||++++..+ ..++.+ +..++++|
T Consensus 4 ~~f~y~~P~sl~ea~~ll~~----~~~a~~--laGGT~l~~~~k~~~~~~~~lIdl~~i~eL---~~I~~~-~~~l~IGA 73 (288)
T 1t3q_C 4 PAFSYRAPASLQEVIQVLAD----DPDARI--IAGGQSLLPLLAFRLVYPSCLVDLRNVSEL---FEISQS-AGILSVGA 73 (288)
T ss_dssp CCCEEECCSSHHHHHHHHHH----CTTCEE--ESSCTTHHHHHHTTCCCCSEEEECTTCGGG---GCEEEE-TTEEEEET
T ss_pred CCceEECCCCHHHHHHHHhh----CCCCEE--EeCchhHHHHHhcCCCCCCEEEECCCChhh---cCeEEc-CCEEEEcC
Confidence 34568899999999998863 223434 5999995321 11235799999986432 245655 67899999
Q ss_pred CccHHHHHH--HHHhC-CCc------ccccCCCCceeEeeecCCCCCCCCccccCcccccEE-------EEEEEecCccE
Q 009793 145 EQLWIDVLN--ATLEH-GLA------PASWTDYLYLTVGGTLSNAGISGQTFRYGPQISNVY-------ELDVVTGKGEL 208 (525)
Q Consensus 145 Gv~~~~l~~--~l~~~-gl~------p~~~~~~~~~tvGG~~~~~g~g~~~~~yG~~~d~v~-------~~~vV~~dG~~ 208 (525)
++++.+|.+ .+.++ ..+ .-++.-.+.+|+||+++++.. ..|... .+++..++|+.
T Consensus 74 ~vt~~~l~~~~~~~~~~p~L~~a~~~ias~qiRN~aTiGGNi~~a~p---------~sD~~~~L~Al~A~v~l~~~~g~R 144 (288)
T 1t3q_C 74 MVTHFRNKTDPTVAKCVPILPKVLAHVAHQAVRNRGTLGGSLAHADA---------GAEMPFLMATLGATMYIASSAGVR 144 (288)
T ss_dssp TCBHHHHHHCHHHHHHCTHHHHHHTTSSCHHHHTTCBHHHHHHHTCT---------TCHHHHHHHHTTCEEEEEETTEEE
T ss_pred CCcHHHHhcCHHHHHHHHHHHHHHHHhCCHHHHcceechhhcccCCC---------cHHHHHHHHHcCcEEEEEcCCceE
Confidence 999999986 34332 111 111111235799999986632 355543 67777788853
Q ss_pred EEecCCCChhHHHHHhc-CCCcceEEEEeEEEEE
Q 009793 209 MTCSALKNSELFYAALG-GLGQFGIITRARIALE 241 (525)
Q Consensus 209 ~~~~~~~~~dl~~~~~G-s~G~lGiit~~tl~l~ 241 (525)
.. .-. |+|....- ....--|||++.+...
T Consensus 145 ~v-p~~---dF~~g~~~t~L~~~Eil~~I~iP~~ 174 (288)
T 1t3q_C 145 SV-SAT---DFMKGHYFTDLEAGEVLVRVEIPIP 174 (288)
T ss_dssp EE-EHH---HHEEETTEESCCTTCEEEEEEEECC
T ss_pred EE-EHH---HHhcCcccccCCCCCEEEEEEecCC
Confidence 22 111 32222110 1111257999888643
No 34
>3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=95.91 E-value=0.0036 Score=61.53 Aligned_cols=151 Identities=19% Similarity=0.166 Sum_probs=87.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCC-CcEEEEecCCCCCCCC---CcCCCcEEEEcCCccCcCCCCeEEEcCCcEEEEcC
Q 009793 69 PVAVLYPSSTEDIVALVKAAYNSSV-PFKIAAKGRGHSVRGQ---AMADGGVVVEMMALKNYRNGNGITVGSGFYADVAG 144 (525)
Q Consensus 69 p~~vv~P~~~~ev~~~v~~a~~~~~-~~~v~~~g~G~~~~g~---~~~~~gvvidl~~mn~i~~~~~i~id~~~~v~v~a 144 (525)
|--.++|+|.+|..++++.. .. +..+ .+|||++.-. .......+||++++..+ ..++.+ +..++++|
T Consensus 3 ~f~y~~P~sl~ea~~ll~~~---~~~~a~~--laGGT~l~~~~k~~~~~~~~lIdl~~i~eL---~~I~~~-~~~l~IGA 73 (296)
T 3hrd_C 3 DFEFFAPKTLEEAKGLLHQY---KDVPPAI--IAGGTDLVIEINDRWEKPDVVIDIKKLKEL---EYIRVE-ENTIHIGA 73 (296)
T ss_dssp CCEEECCSSHHHHHHHHHHT---TTSCCEE--ESSCTTHHHHHHTTSCCCSEEEECTTCGGG---CCEEEC-SSEEEEET
T ss_pred ceeEeCCCCHHHHHHHHHhC---CCCCeEE--EECCcHHHHHhhcCCCCCCeEEEcccChhh---cceEEc-CCeEEEcc
Confidence 44578999999999887643 22 3444 4999997421 11236799999987533 356665 67899999
Q ss_pred CccHHHHHHH--HHhC-C-C-----cccccCCCCceeEeeecCCCCCCCCccccCcccccE-----E--EEEEEecCccE
Q 009793 145 EQLWIDVLNA--TLEH-G-L-----APASWTDYLYLTVGGTLSNAGISGQTFRYGPQISNV-----Y--ELDVVTGKGEL 208 (525)
Q Consensus 145 Gv~~~~l~~~--l~~~-g-l-----~p~~~~~~~~~tvGG~~~~~g~g~~~~~yG~~~d~v-----~--~~~vV~~dG~~ 208 (525)
++++.++.+. +.++ . + ..-++.-.+.+||||+++++.. ..|.. + .+++..++|+.
T Consensus 74 ~vt~~~l~~~~~~~~~~p~L~~a~~~ias~qIRN~aTiGGNi~~a~p---------~sD~~~~LlAldA~v~l~~~~g~R 144 (296)
T 3hrd_C 74 LSTFTQIENHPFIRSHVRALYKAASQVGSPQIRNLGTIGGNLSTSSV---------AGDGVSAMTTLDATVVLESVRGTR 144 (296)
T ss_dssp TCBHHHHHHCHHHHHHCHHHHHHHHTSSCHHHHHHCBHHHHHHHTCT---------TCHHHHHHHHTTCEEEEEETTEEE
T ss_pred CCcHHHHHhChhhhhHhHHHHHHHHHhCCHHHhcceehhhhhccCCC---------chHHHHHHHHhCcEEEEEcCCceE
Confidence 9999998752 1111 1 1 0111111135799999997542 33432 1 45666677743
Q ss_pred EEecCCCChhHHHHHh---c-CCCcceEEEEeEEEEE
Q 009793 209 MTCSALKNSELFYAAL---G-GLGQFGIITRARIALE 241 (525)
Q Consensus 209 ~~~~~~~~~dl~~~~~---G-s~G~lGiit~~tl~l~ 241 (525)
.. .-. |+|.... - ....-=|||++.+...
T Consensus 145 ~v-p~~---dF~~g~~~~~~t~L~~~Eil~~I~iP~~ 177 (296)
T 3hrd_C 145 QM-KLT---DFFDGEGFKRRNALEADEIMTEVIIDRP 177 (296)
T ss_dssp EE-EHH---HHHHCCSSSSSSSCCTTCEEEEEEEECC
T ss_pred EE-EHH---HHhcccccccccCCCCCcEEEEEEecCC
Confidence 22 111 4332221 0 0111248999888543
No 35
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B*
Probab=88.04 E-value=0.9 Score=44.78 Aligned_cols=100 Identities=13% Similarity=0.121 Sum_probs=64.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC---CCcCCCcEEEEcCCccCcCCCCeEEEcCCcEEEEcCC
Q 009793 69 PVAVLYPSSTEDIVALVKAAYNSSVPFKIAAKGRGHSVRG---QAMADGGVVVEMMALKNYRNGNGITVGSGFYADVAGE 145 (525)
Q Consensus 69 p~~vv~P~~~~ev~~~v~~a~~~~~~~~v~~~g~G~~~~g---~~~~~~gvvidl~~mn~i~~~~~i~id~~~~v~v~aG 145 (525)
|--.++|+|.+|..++++ +.+- .+.+|||++.. ........+||++++..+ ..++.++++.++++|+
T Consensus 6 ~f~y~~P~sl~ea~~ll~-----~~~a--~~lAGGT~l~~~~k~~~~~p~~lIdi~~i~eL---~~I~~~~~~~l~IGA~ 75 (324)
T 1rm6_B 6 DFRTHRPATLADAVNALA-----AEAT--LPLGAGTDLLPNLRRGLGHPAALVDLTGIDGL---ATISTLADGSLRIGAG 75 (324)
T ss_dssp CCEEECCSSHHHHHHHTT-----STTE--EEESSCTTHHHHHHTTSCCCSEEEECTTSTTT---TCEEECTTSCEEEETT
T ss_pred ceEEEccCCHHHHHHHHh-----CCCC--EEEECchhHHHHHhccCCCCCEEEECCCChhh---cceEECCCCeEEEccC
Confidence 445889999999988875 2233 44599999732 112236899999987543 3567654457999999
Q ss_pred ccHHHHHHHH--HhC-CCc------ccccCCCCceeEeeecC
Q 009793 146 QLWIDVLNAT--LEH-GLA------PASWTDYLYLTVGGTLS 178 (525)
Q Consensus 146 v~~~~l~~~l--~~~-gl~------p~~~~~~~~~tvGG~~~ 178 (525)
+++.+|.+.- .++ ..+ .-++.-.+.+||||+++
T Consensus 76 vt~~~l~~~~~~~~~~p~L~~a~~~ias~qIRN~aTiGGNl~ 117 (324)
T 1rm6_B 76 ATLEAIAEHDAIRTTWPALAQAAESVAGPTHRAAATLGGNLC 117 (324)
T ss_dssp CBHHHHHHCHHHHHHSHHHHHHHHHSSCHHHHHHCBHHHHHT
T ss_pred CcHHHHHhChHHHHHHHHHHHHHHHhCCHHHcceeEeeeecc
Confidence 9999997742 211 110 11111123579999996
No 36
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=67.44 E-value=10 Score=44.53 Aligned_cols=80 Identities=10% Similarity=-0.022 Sum_probs=57.0
Q ss_pred CCccEEEECCCHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCC---cCCCcEEEEcCCccCcCCCCeEEEcCCcEEEEc
Q 009793 67 ENPVAVLYPSSTEDIVALVKAAYNSSVPFKIAAKGRGHSVRGQA---MADGGVVVEMMALKNYRNGNGITVGSGFYADVA 143 (525)
Q Consensus 67 ~~p~~vv~P~~~~ev~~~v~~a~~~~~~~~v~~~g~G~~~~g~~---~~~~gvvidl~~mn~i~~~~~i~id~~~~v~v~ 143 (525)
..+...++|.|.+|+.++++.- .+.. +.+|||++.-.- .....++||++++..+ ..++.+ +..++++
T Consensus 231 ~~~~~~~~P~sl~ea~~ll~~~----~~a~--lvaGgT~l~~~~k~~~~~~~~lIdl~~i~EL---~~I~~~-~~~l~IG 300 (1332)
T 3unc_A 231 GERVTWIQASTLKELLDLKAQH----PEAK--LVVGNTEIGIEMKFKNQLFPMIICPAWIPEL---NAVEHG-PEGISFG 300 (1332)
T ss_dssp CSSCEEEECCSHHHHHHHHHHC----TTCE--ECSSCTTHHHHHHHSCCCCSEEEECTTCGGG---GCEEEC-SSEEEEE
T ss_pred CCceEEEccCCHHHHHHHHhhC----CCCE--EEEeCcHHHHHhhcCCCCCCeEEEcCCCHHh---CceEEe-CCEEEEE
Confidence 4556799999999999987532 2333 458999864211 1135689999986533 356666 6679999
Q ss_pred CCccHHHHHHHHH
Q 009793 144 GEQLWIDVLNATL 156 (525)
Q Consensus 144 aGv~~~~l~~~l~ 156 (525)
|++++.+|.+.+.
T Consensus 301 A~vtl~~l~~~l~ 313 (1332)
T 3unc_A 301 AACALSSVEKTLL 313 (1332)
T ss_dssp TTCBHHHHHHHHH
T ss_pred ecChHHHHHHHHH
Confidence 9999999988764
No 37
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=41.98 E-value=37 Score=39.90 Aligned_cols=78 Identities=8% Similarity=-0.023 Sum_probs=53.3
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC---CcCCCcEEEEcCCccCcCCCCeEEEcCCcEEEEcCCc
Q 009793 70 VAVLYPSSTEDIVALVKAAYNSSVPFKIAAKGRGHSVRGQ---AMADGGVVVEMMALKNYRNGNGITVGSGFYADVAGEQ 146 (525)
Q Consensus 70 ~~vv~P~~~~ev~~~v~~a~~~~~~~~v~~~g~G~~~~g~---~~~~~gvvidl~~mn~i~~~~~i~id~~~~v~v~aGv 146 (525)
..-.+|.|.+|+.++... .-+.+++ .|+|.+.-. -...-.++||+++...+ ..++.+ +..++++|+|
T Consensus 241 ~~w~~P~tl~el~~l~~~----~p~a~lv--aGnT~~gl~~~~~~~~~~~~I~~~~v~EL---~~i~~~-~~~l~IGA~v 310 (1335)
T 3zyv_A 241 TTWIAPGTLNDLLELKMK----HPSAPLV--IGNTYLGLHMKFTDVSYPIIISPARILEL---FVVTNT-KQGLTLGTGL 310 (1335)
T ss_dssp CEEEECSSHHHHHHHHHH----CTTSCBC--SSCTTHHHHHC--CCCCSEEECCTTCGGG---SCEECC-TTEEEEETTC
T ss_pred ceEecCCCHHHHHHHHHH----CCCCeEE--EecccceeeEeecCCCCCeEEEcCcchhH---heEEec-CCEEEEcccC
Confidence 456899999999987542 2344555 677775311 11125689998875533 345655 6779999999
Q ss_pred cHHHHHHHHHh
Q 009793 147 LWIDVLNATLE 157 (525)
Q Consensus 147 ~~~~l~~~l~~ 157 (525)
++.++.+.|.+
T Consensus 311 tls~~~~~l~~ 321 (1335)
T 3zyv_A 311 SLTQVKNVLSD 321 (1335)
T ss_dssp BHHHHHHHHHH
T ss_pred cHHHHHHHHHH
Confidence 99999988864
No 38
>1xty_A PTH, peptidyl-tRNA hydrolase; mixed beta sheet; 1.80A {Pyrococcus abyssi}
Probab=30.79 E-value=50 Score=27.03 Aligned_cols=47 Identities=15% Similarity=0.238 Sum_probs=36.2
Q ss_pred HHHHhccccCcCCCCccEEEECCCHHHHHHHHHHHHcCCCCcEE-EEecCCC
Q 009793 54 IKSASSDYGNIFKENPVAVLYPSSTEDIVALVKAAYNSSVPFKI-AAKGRGH 104 (525)
Q Consensus 54 ~~~~~~d~~~~~~~~p~~vv~P~~~~ev~~~v~~a~~~~~~~~v-~~~g~G~ 104 (525)
+..+...|. ..+.|..|++..|++|+.++.+.|. +.++|. +++=+|+
T Consensus 42 ~~~~~~~W~--~~g~~KiVlk~~~e~el~~l~~~a~--~~gl~~~~i~DAG~ 89 (120)
T 1xty_A 42 WKEWLNEWL--HQGQPKIIVKVNSLDEIISRAKKAE--TMNLPFSIIEDAGK 89 (120)
T ss_dssp HHHHHHHHH--HTTCCEEEEEESSHHHHHHHHHHHH--HTTCCEEEEECCSS
T ss_pred hHHHHHHHH--HCCCcEEEEecCCHHHHHHHHHHHH--HCCCCEEEEEcCCc
Confidence 345556663 3678999999999999999999997 788885 4455654
No 39
>1rzw_A Protein AF2095(GR4); beta-sheet of 4 parallel, anti-parallel beta-strands and 3 alpha-helices, structural genomics, PSI; NMR {Archaeoglobus fulgidus} SCOP: c.131.1.1 PDB: 3erj_A
Probab=26.84 E-value=71 Score=26.31 Aligned_cols=44 Identities=16% Similarity=0.148 Sum_probs=34.5
Q ss_pred hccccCcCCCCccEEEECCCHHHHHHHHHHHHcCCCCcEE-EEecCCCC
Q 009793 58 SSDYGNIFKENPVAVLYPSSTEDIVALVKAAYNSSVPFKI-AAKGRGHS 105 (525)
Q Consensus 58 ~~d~~~~~~~~p~~vv~P~~~~ev~~~v~~a~~~~~~~~v-~~~g~G~~ 105 (525)
...|. ..+.+..|++..|++|+.++.+.|. +.++|. +++-+|..
T Consensus 40 l~~W~--~~G~~Kvvlk~~~e~el~~L~~~a~--~~gl~~~~I~DAG~T 84 (123)
T 1rzw_A 40 RRKWL--DEGQKKVVLKVKSLEELLGIKHKAE--SLGLVTGLVQDAGLT 84 (123)
T ss_dssp HHHTG--GGCSSEEEEECSCHHHHHHHHHHHH--HTTCCEEEECCTTCC
T ss_pred HHHHH--HCCCcEEEEecCCHHHHHHHHHHHH--HCCCCEEEEECCCCc
Confidence 34563 3678999999999999999999997 788885 45666654
No 40
>1wn2_A Peptidyl-tRNA hydrolase; riken structural genomics/proteomics initiative, structural genomics; 1.20A {Pyrococcus horikoshii} PDB: 2d3k_A
Probab=21.98 E-value=80 Score=25.85 Aligned_cols=38 Identities=16% Similarity=0.121 Sum_probs=31.2
Q ss_pred CCCCccEEEECCCHHHHHHHHHHHHcCCCCcEE-EEecCCC
Q 009793 65 FKENPVAVLYPSSTEDIVALVKAAYNSSVPFKI-AAKGRGH 104 (525)
Q Consensus 65 ~~~~p~~vv~P~~~~ev~~~v~~a~~~~~~~~v-~~~g~G~ 104 (525)
..+.|..|++..|++|+.++.+.|. +.++|. .++-+|+
T Consensus 52 ~~g~~Kvvlk~~~e~el~~l~~~a~--~~gl~~~~i~DAG~ 90 (121)
T 1wn2_A 52 REGQKKVVVKVESEEELFKLKAEAE--KLGLPNALIRDAGL 90 (121)
T ss_dssp HTTCCEEEEEESSHHHHHHHHHHHH--HTTCCEEEEECTTC
T ss_pred HCCCcEEEEecCCHHHHHHHHHHHH--HCCCCEEEEEcCCc
Confidence 3678999999999999999999997 788885 3455655
No 41
>3s8s_A Histone-lysine N-methyltransferase SETD1A; chromatin modification, transcription regulation, structural genomics, structural genomics consortium; 1.30A {Homo sapiens}
Probab=21.14 E-value=2.2e+02 Score=22.27 Aligned_cols=47 Identities=19% Similarity=0.305 Sum_probs=32.9
Q ss_pred hhHHHHHhcCCCcceEEEEeEEEEEecC-CceEEEEEEeCChhhHHHHHHHH
Q 009793 217 SELFYAALGGLGQFGIITRARIALEPAP-KRVKWVRMLYSDFSSFSRDQEYL 267 (525)
Q Consensus 217 ~dl~~~~~Gs~G~lGiit~~tl~l~p~p-~~~~~~~~~~~~~~~~~~~~~~~ 267 (525)
.+|..++ ..+|-|.++.+-..+.. .......+.|.+.+++.++++.+
T Consensus 21 ~~L~~~F----~~~G~i~~v~i~~d~~tg~~rG~aFV~f~~~~~A~~Ai~~l 68 (110)
T 3s8s_A 21 TFLKDMC----RKYGEVEEVEILLHPRTRKHLGLARVLFTSTRGAKETVKNL 68 (110)
T ss_dssp HHHHHHH----TTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHH
T ss_pred HHHHHHH----HhcCCeeEEEEEECCCCCceeeEEEEEECCHHHHHHHHHHh
Confidence 3666665 56788999888766653 33456778899988887776644
No 42
>2dnh_A Bruno-like 5, RNA binding protein; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dnk_A 2dno_A
Probab=20.94 E-value=1.6e+02 Score=22.34 Aligned_cols=47 Identities=13% Similarity=0.182 Sum_probs=32.3
Q ss_pred hhHHHHHhcCCCcceEEEEeEEEEEecCCceEEEEEEeCChhhHHHHHHHH
Q 009793 217 SELFYAALGGLGQFGIITRARIALEPAPKRVKWVRMLYSDFSSFSRDQEYL 267 (525)
Q Consensus 217 ~dl~~~~~Gs~G~lGiit~~tl~l~p~p~~~~~~~~~~~~~~~~~~~~~~~ 267 (525)
.+|...+ ..+|-|.++.+...+.-......++.|.+.+++..++..+
T Consensus 30 ~~l~~~F----~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~A~~Ai~~l 76 (105)
T 2dnh_A 30 EDVLRLF----QPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHAL 76 (105)
T ss_dssp HHHHHHH----TTTSCEEEEEEEECSSSCEEEEEEEEESSHHHHHHHHHHH
T ss_pred HHHHHHH----HhcCCeEEEEEEECCCCCcCcEEEEEeCCHHHHHHHHHHH
Confidence 3666555 3567788888776654344567788999988888776644
No 43
>2ywk_A Putative RNA-binding protein 11; RRM-domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.54A {Homo sapiens}
Probab=20.29 E-value=1.5e+02 Score=22.00 Aligned_cols=47 Identities=19% Similarity=0.111 Sum_probs=32.5
Q ss_pred hhHHHHHhcCCCcceEEEEeEEEEEecCCceEEEEEEeCChhhHHHHHHHH
Q 009793 217 SELFYAALGGLGQFGIITRARIALEPAPKRVKWVRMLYSDFSSFSRDQEYL 267 (525)
Q Consensus 217 ~dl~~~~~Gs~G~lGiit~~tl~l~p~p~~~~~~~~~~~~~~~~~~~~~~~ 267 (525)
.||...+ ..+|-|.++.+...+........++.|.+.+++.+++..+
T Consensus 31 ~~l~~~F----~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~l 77 (95)
T 2ywk_A 31 EILYELF----LQAGPLTKVTICKDREGKPKSFGFVCFKHPESVSYAIALL 77 (95)
T ss_dssp HHHHHHH----GGGSCEEEEEEEECTTSCEEEEEEEEESSTHHHHHHHHHH
T ss_pred HHHHHHH----HhcCCEEEEEEEECCCCCCceEEEEEECCHHHHHHHHHHh
Confidence 3666665 3467788887766555444557788999999887776644
Done!