BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009802
(525 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255552860|ref|XP_002517473.1| structure-specific recognition protein, putative [Ricinus communis]
gi|223543484|gb|EEF45015.1| structure-specific recognition protein, putative [Ricinus communis]
Length = 640
Score = 945 bits (2443), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/524 (88%), Positives = 500/524 (95%), Gaps = 2/524 (0%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
MLTF+VG KQAFEVSLADVSQTQ+QGKNDVILEFHVDDTTGANEKDSLMEISFHIP++NT
Sbjct: 118 MLTFLVGSKQAFEVSLADVSQTQMQGKNDVILEFHVDDTTGANEKDSLMEISFHIPSNNT 177
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
QFVGDENHPPAQVFRDKIMSMADV GGEEAVVTF+G+AILTPRGRYSVELHLSFLRLQG
Sbjct: 178 QFVGDENHPPAQVFRDKIMSMADVNPGGEEAVVTFDGVAILTPRGRYSVELHLSFLRLQG 237
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
QANDFKIQYSSVVRLFLLPKSNQPHTFV+VTLDPPIRKGQTLYPHIVLQF+TD+VVQS L
Sbjct: 238 QANDFKIQYSSVVRLFLLPKSNQPHTFVIVTLDPPIRKGQTLYPHIVLQFDTDFVVQSTL 297
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
M+E+LL+TKYKDKLEPSYKGLIHEVFTTILRGLSGAK+TKPGKFRS QDGYAVKSSLKA
Sbjct: 298 TMNEDLLSTKYKDKLEPSYKGLIHEVFTTILRGLSGAKVTKPGKFRSCQDGYAVKSSLKA 357
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
EDG+LYPLEKSFFFLPKPPTLILHEEIDYVEFERHA G SNMHYFDLLIRLKTEQEHLFR
Sbjct: 358 EDGLLYPLEKSFFFLPKPPTLILHEEIDYVEFERHATGSSNMHYFDLLIRLKTEQEHLFR 417
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
NIQRNEYHNLFDFISGKGLKIMNLGDMKTT+GVAAVLQ DDDDAVDPHLERIKNEA GDE
Sbjct: 418 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTNGVAAVLQNDDDDAVDPHLERIKNEA-GDE 476
Query: 361 SDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSSVKASTSKKKS 420
SDEEDSDFVADKDDGGSPTDDSGEEDSD S SG EK +KES KE SS KA+ KK+S
Sbjct: 477 SDEEDSDFVADKDDGGSPTDDSGEEDSDGSLSGDGTEKHVRKESTKEPSSSKAA-PKKRS 535
Query: 421 RDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWK 480
+DG++DGKKKKQKKKKDPNAPK+AMSGF+FFSQMEREN+KKSNPGIAF DVG++LG++WK
Sbjct: 536 KDGNDDGKKKKQKKKKDPNAPKKAMSGFMFFSQMERENVKKSNPGIAFGDVGKILGDKWK 595
Query: 481 KMSVEEREPYESKARADKKRYKDEISGYKNPKPMDIDSGNESDS 524
K+S EE+EPYE+KARADKKRYK+E+SGYKNP+PMDIDSGNESDS
Sbjct: 596 KLSAEEKEPYEAKARADKKRYKEEVSGYKNPQPMDIDSGNESDS 639
>gi|449459450|ref|XP_004147459.1| PREDICTED: FACT complex subunit SSRP1-like [Cucumis sativus]
Length = 642
Score = 924 bits (2388), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/526 (89%), Positives = 500/526 (95%), Gaps = 2/526 (0%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
MLTF+VG KQAFEVSLADV+QTQLQGKNDV+LEFHVDDTTGANEKDSLMEISFHIPN+NT
Sbjct: 118 MLTFLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNT 177
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
QFVGDE+ PPAQVFRDKIMSMADV AG EEAVVTFEGIAILTPRGRYSVELHLSFLRLQG
Sbjct: 178 QFVGDESRPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 237
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQS L
Sbjct: 238 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTL 297
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
+ +EL NTKYKDKLEPSYKGLIHEVFTTILRGLSGAKIT+PGKFRS QDGYAVKSSLKA
Sbjct: 298 QIGDELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKA 357
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR
Sbjct: 358 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 417
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
NIQRNEYHNLFDFISGKGLKIMNLGD + DGVAAVLQEDDDDAVDPHLERI+NEAGGDE
Sbjct: 418 NIQRNEYHNLFDFISGKGLKIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAGGDE 477
Query: 361 SDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSSVKASTSKKKS 420
SDEEDSDFVADKDDGGSPTDDSG +DSD S SGGEKEKP KKE+KK+ S+ KA +KKKS
Sbjct: 478 SDEEDSDFVADKDDGGSPTDDSGGDDSDGSASGGEKEKPGKKEAKKDPSASKAP-AKKKS 536
Query: 421 RDGDEDGK-KKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERW 479
R+G +DG KKKQKKKKDPNAPKRA+SGF+FFS+MERENIKKSNPGI+FT++GRVLG++W
Sbjct: 537 REGADDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKW 596
Query: 480 KKMSVEEREPYESKARADKKRYKDEISGYKNPKPMDIDSGNESDSA 525
KMS EE+EPYESKAR DKKRYK+EISGYKNP+PM+IDSGNESDSA
Sbjct: 597 NKMSAEEKEPYESKARDDKKRYKEEISGYKNPQPMNIDSGNESDSA 642
>gi|356496334|ref|XP_003517023.1| PREDICTED: FACT complex subunit SSRP1-like [Glycine max]
Length = 640
Score = 900 bits (2325), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/525 (86%), Positives = 495/525 (94%), Gaps = 2/525 (0%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
ML F VG KQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT
Sbjct: 118 MLAFTVGSKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 177
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
QFVGDEN PPAQVFRDKIMSMADVGAGGE+A+VTFEGIAILTPRGRYSVELH+SFLRLQG
Sbjct: 178 QFVGDENRPPAQVFRDKIMSMADVGAGGEDAIVTFEGIAILTPRGRYSVELHMSFLRLQG 237
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
QANDFKIQYSSVVRLFLLPKSNQPHTFV+++LDPPIRKGQTLYPHIV+QFETDYVV+SEL
Sbjct: 238 QANDFKIQYSSVVRLFLLPKSNQPHTFVIISLDPPIRKGQTLYPHIVMQFETDYVVESEL 297
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
++E+L NTKYKDKL+ SYKGLIHEVFTTILRGLSGAK+TKPGKFRS QDGYAVKSSLKA
Sbjct: 298 AINEDLYNTKYKDKLDLSYKGLIHEVFTTILRGLSGAKVTKPGKFRSCQDGYAVKSSLKA 357
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
EDG+LYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLK+EQEHLFR
Sbjct: 358 EDGILYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKSEQEHLFR 417
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
NIQRNEYHNL++FIS KGLKI+NLGD + T G+ VL+ DDDDAVDPHLERIKNEAGGDE
Sbjct: 418 NIQRNEYHNLYEFISSKGLKILNLGDAQPTVGIKKVLENDDDDAVDPHLERIKNEAGGDE 477
Query: 361 SDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSSVKASTSKKKS 420
SDEEDSDFVADKDD GSPTDDSG +DSDA++SG EKEKPAKKESKK+ S +++ KK
Sbjct: 478 SDEEDSDFVADKDDEGSPTDDSGADDSDATDSGDEKEKPAKKESKKDLPSKASTSKKKSK 537
Query: 421 RDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWK 480
DEDGKK+KQKK+KDPNAPKRAMSGF+FFS++EREN+KK+NPGI+FTDV RVLGE+WK
Sbjct: 538 D--DEDGKKRKQKKRKDPNAPKRAMSGFMFFSKLERENLKKTNPGISFTDVSRVLGEKWK 595
Query: 481 KMSVEEREPYESKARADKKRYKDEISGYKNPKPMDIDSGNESDSA 525
K+SVEE+EPYE+KAR DKKRYKDEISGYKNP+PM+IDSGNESDSA
Sbjct: 596 KLSVEEKEPYEAKAREDKKRYKDEISGYKNPQPMNIDSGNESDSA 640
>gi|225452706|ref|XP_002282538.1| PREDICTED: FACT complex subunit SSRP1 [Vitis vinifera]
gi|296082859|emb|CBI22160.3| unnamed protein product [Vitis vinifera]
Length = 644
Score = 899 bits (2322), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/526 (91%), Positives = 507/526 (96%), Gaps = 2/526 (0%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
MLTF+VG KQAFEVSLADVSQTQ+QGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT
Sbjct: 118 MLTFLVGSKQAFEVSLADVSQTQMQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 177
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
QFVGDEN PPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG
Sbjct: 178 QFVGDENRPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 237
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIV+QFETDYVVQSEL
Sbjct: 238 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVMQFETDYVVQSEL 297
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
+SEELLN+KYKDKLEPSYKGLIHEVFT ILRGLSGAK+TKPGKFRS QDGYAVKSSLKA
Sbjct: 298 SLSEELLNSKYKDKLEPSYKGLIHEVFTLILRGLSGAKVTKPGKFRSCQDGYAVKSSLKA 357
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR
Sbjct: 358 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 417
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
NIQRNEYHNLFDFISGKGLKIMNLGD++T DGVAAVLQ DDDDAVDPHLERIKNEAGGDE
Sbjct: 418 NIQRNEYHNLFDFISGKGLKIMNLGDVQTADGVAAVLQNDDDDAVDPHLERIKNEAGGDE 477
Query: 361 SDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSSVKASTSKKKS 420
SDEED DFV DKDDGGSPTDDSGEE+SDASESGGEKEKP+KKESKKE S KAS+SKKK
Sbjct: 478 SDEEDEDFVLDKDDGGSPTDDSGEEESDASESGGEKEKPSKKESKKEPSVSKASSSKKKP 537
Query: 421 RDGDEDGK-KKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERW 479
+DGDEDG K+KQKKKKDPNAPKRAMSGF+FFSQ ERENIKKS PGIAFT+VGRVLG++W
Sbjct: 538 KDGDEDGSKKRKQKKKKDPNAPKRAMSGFMFFSQTERENIKKSTPGIAFTEVGRVLGDKW 597
Query: 480 KKMSVEEREPYESKARADKKRYKDEISGYK-NPKPMDIDSGNESDS 524
KKM+ EE+EPYE+KA+ADKKRY+DEISGYK NP+PM++DSGNESDS
Sbjct: 598 KKMTAEEKEPYEAKAQADKKRYRDEISGYKSNPQPMNVDSGNESDS 643
>gi|147866286|emb|CAN79926.1| hypothetical protein VITISV_042446 [Vitis vinifera]
Length = 644
Score = 897 bits (2319), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/526 (91%), Positives = 506/526 (96%), Gaps = 2/526 (0%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
MLTF+VG KQAFEVSLADVSQTQ+QGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT
Sbjct: 118 MLTFLVGSKQAFEVSLADVSQTQMQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 177
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
QFVGDEN PPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG
Sbjct: 178 QFVGDENRPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 237
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIV+QFETDYVVQSEL
Sbjct: 238 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVMQFETDYVVQSEL 297
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
+SEELLN KYKDKLEPSYKGLIHEVFT ILRGLSGAK+TKPGKFRS QDGYAVKSSLKA
Sbjct: 298 SLSEELLNXKYKDKLEPSYKGLIHEVFTLILRGLSGAKVTKPGKFRSCQDGYAVKSSLKA 357
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR
Sbjct: 358 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 417
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
NIQRNEYHNLFDFISGKGLKIMNLGD++T DGVAAVLQ DDDDAVDPHLERIKNEAGGDE
Sbjct: 418 NIQRNEYHNLFDFISGKGLKIMNLGDVQTADGVAAVLQNDDDDAVDPHLERIKNEAGGDE 477
Query: 361 SDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSSVKASTSKKKS 420
SDEED DFV DKDDGGSPTDDSGEE+SDASESGGEKEKP+KKESKKE S KAS+SKKK
Sbjct: 478 SDEEDEDFVLDKDDGGSPTDDSGEEESDASESGGEKEKPSKKESKKEPSVSKASSSKKKP 537
Query: 421 RDGDEDGK-KKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERW 479
+DGDEDG K+KQKKKKDPNAPKRAMSGF+FFSQ ERENIKKS PGIAFT+VGRVLG++W
Sbjct: 538 KDGDEDGSKKRKQKKKKDPNAPKRAMSGFMFFSQTERENIKKSTPGIAFTEVGRVLGDKW 597
Query: 480 KKMSVEEREPYESKARADKKRYKDEISGYK-NPKPMDIDSGNESDS 524
KKM+ EE+EPYE+KA+ADKKRY+DEISGYK NP+PM++DSGNESDS
Sbjct: 598 KKMTAEEKEPYEAKAQADKKRYRDEISGYKSNPQPMNVDSGNESDS 643
>gi|75218951|sp|O04235.1|SSRP1_VICFA RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=Recombination signal sequence recognition protein 1
gi|2104679|emb|CAA66480.1| transcription factor [Vicia faba var. minor]
Length = 642
Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/526 (84%), Positives = 484/526 (92%), Gaps = 2/526 (0%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
ML FMVG KQAFEVSLADVSQT LQGKNDVILEFHVDDTTGANEKDSLME+SFHIP+SNT
Sbjct: 118 MLAFMVGSKQAFEVSLADVSQTNLQGKNDVILEFHVDDTTGANEKDSLMEMSFHIPSSNT 177
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
QFVGDEN P AQVFRDKIMSMADVG GGE+AVVTF+GIAILTPRGRYSVELHLSFLRLQG
Sbjct: 178 QFVGDENRPSAQVFRDKIMSMADVGVGGEDAVVTFDGIAILTPRGRYSVELHLSFLRLQG 237
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
QANDFKIQYSSVVRLFLLPKSNQPHTFV+++LDPPIRKGQTLYPHIV+QFETD VV SEL
Sbjct: 238 QANDFKIQYSSVVRLFLLPKSNQPHTFVIISLDPPIRKGQTLYPHIVMQFETDTVVDSEL 297
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
+SE+L N+KYKDKLE SYKGLIHEVFTT+LRGLSG K+TKPG FRS QDGYAVKSSLKA
Sbjct: 298 AISEDLYNSKYKDKLELSYKGLIHEVFTTVLRGLSGGKVTKPGNFRSCQDGYAVKSSLKA 357
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
EDG+LYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLK+EQEHLFR
Sbjct: 358 EDGILYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKSEQEHLFR 417
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGD-MKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGD 359
NIQRNEYHNL+ FIS KGLKIMN+ D + GVA VL+ DDDDAVDPHLERI+NEAGGD
Sbjct: 418 NIQRNEYHNLYGFISSKGLKIMNIADAQQAVGGVAKVLENDDDDAVDPHLERIRNEAGGD 477
Query: 360 ESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSSVKASTSKKK 419
ESDEEDSDFV DKDDGGSPTDDSG + SDAS+SGGE EKPAKKE KK+ SS +S+ KK
Sbjct: 478 ESDEEDSDFVIDKDDGGSPTDDSGADVSDASQSGGETEKPAKKEPKKDLSSKASSSKKKS 537
Query: 420 SRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERW 479
D DG KKKQKKKKDPNAPKRA+SGF+FFSQMEREN+KK+NPGI+FTDVGRVLGE+W
Sbjct: 538 KDA-DVDGVKKKQKKKKDPNAPKRALSGFMFFSQMERENLKKTNPGISFTDVGRVLGEKW 596
Query: 480 KKMSVEEREPYESKARADKKRYKDEISGYKNPKPMDIDSGNESDSA 525
K +S EE+EPYE+KA+ADKKRYKDEISGYKNP+PM++DSGNESDSA
Sbjct: 597 KNLSAEEKEPYEAKAQADKKRYKDEISGYKNPQPMNVDSGNESDSA 642
>gi|356506416|ref|XP_003521979.1| PREDICTED: FACT complex subunit SSRP1-like [Glycine max]
Length = 614
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/525 (83%), Positives = 475/525 (90%), Gaps = 28/525 (5%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
ML FMVG KQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT
Sbjct: 118 MLAFMVGSKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 177
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
QFVGDEN PPAQVFRDKIMSMADVGAGGE+A+VTFEGIAILTPRGRYSVELH+SFLRLQG
Sbjct: 178 QFVGDENRPPAQVFRDKIMSMADVGAGGEDAIVTFEGIAILTPRGRYSVELHMSFLRLQG 237
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
QANDFKIQYSSVVRLFLLPKSNQPHTFV+++LDPPIRKGQTLYPHIV+QFETDYVV+SEL
Sbjct: 238 QANDFKIQYSSVVRLFLLPKSNQPHTFVIISLDPPIRKGQTLYPHIVMQFETDYVVESEL 297
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
++E+L NTK+KDKLE SYKGLIHEVFTTILRGLSGAK+TKPGKFRS QDGYAVKSSLKA
Sbjct: 298 AINEDLYNTKFKDKLELSYKGLIHEVFTTILRGLSGAKVTKPGKFRSCQDGYAVKSSLKA 357
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
EDG+LYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLK+EQEHLFR
Sbjct: 358 EDGILYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKSEQEHLFR 417
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
NIQRNEYHNL++FIS KGLKIMNLGD + T G+ VL+ DDDDAVDPHLERIKNEAG DE
Sbjct: 418 NIQRNEYHNLYEFISSKGLKIMNLGDAQPTVGIKKVLENDDDDAVDPHLERIKNEAGEDE 477
Query: 361 SDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSSVKASTSKKKS 420
SDEEDSDFVADKDD GSPTDDSG +DSDA++SG EKEKPAKKES KE
Sbjct: 478 SDEEDSDFVADKDDEGSPTDDSGADDSDATDSGDEKEKPAKKESNKE------------- 524
Query: 421 RDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWK 480
KDPNAPKRAMSGF+FFS++EREN+KK+NPGI+FTDVGRVLGE+WK
Sbjct: 525 ---------------KDPNAPKRAMSGFMFFSKLERENLKKTNPGISFTDVGRVLGEKWK 569
Query: 481 KMSVEEREPYESKARADKKRYKDEISGYKNPKPMDIDSGNESDSA 525
K+S EE+EPYE+KAR DKKRY DEISGYKNP+PM+IDSGNESDSA
Sbjct: 570 KLSAEEKEPYEAKAREDKKRYMDEISGYKNPQPMNIDSGNESDSA 614
>gi|357492685|ref|XP_003616631.1| FACT complex subunit SSRP1 [Medicago truncatula]
gi|355517966|gb|AES99589.1| FACT complex subunit SSRP1 [Medicago truncatula]
Length = 648
Score = 846 bits (2186), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/531 (84%), Positives = 487/531 (91%), Gaps = 6/531 (1%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
ML FMVG KQAFEV LADVSQT LQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT
Sbjct: 118 MLAFMVGSKQAFEVPLADVSQTNLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 177
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
QFVGDEN PPAQVFRDKI+S+ADVGAGGE+AVVTF+GIAILTPRGRYSVELHLSFLRLQG
Sbjct: 178 QFVGDENCPPAQVFRDKIISVADVGAGGEDAVVTFDGIAILTPRGRYSVELHLSFLRLQG 237
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
QANDFKIQYSSVVRLFLLPKSNQPHTFVV++LDPPIRKGQTLYPHIV+QFETDYVV+SEL
Sbjct: 238 QANDFKIQYSSVVRLFLLPKSNQPHTFVVISLDPPIRKGQTLYPHIVMQFETDYVVESEL 297
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
+SE+L N+K+KD+LE SYKGLIHEVFTT+LRGLSGAK+TKPGKFRS QDGYAVKSSLKA
Sbjct: 298 ALSEDLYNSKFKDRLELSYKGLIHEVFTTVLRGLSGAKVTKPGKFRSCQDGYAVKSSLKA 357
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
EDG+LYPLEKSFFFLPKPPTLI HEEIDYVEFERHAAGGSNMHYFDLLIRLK++QEHLFR
Sbjct: 358 EDGILYPLEKSFFFLPKPPTLITHEEIDYVEFERHAAGGSNMHYFDLLIRLKSDQEHLFR 417
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
NIQRNEYHNL+ FIS KGLKIMNLGD + T GVA VL+ DDDDAVDPHLERI+NEAG DE
Sbjct: 418 NIQRNEYHNLYGFISSKGLKIMNLGDAQPTTGVAKVLEGDDDDAVDPHLERIRNEAGEDE 477
Query: 361 SDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKE-----SSSVKAST 415
SDEED DFVA+KDD GSPTDDSG +DSDAS+SG EKE PAKKE KK+ S+S ST
Sbjct: 478 SDEEDEDFVAEKDDEGSPTDDSGADDSDASQSGDEKEIPAKKEPKKDLSSKASASTSTST 537
Query: 416 SKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVL 475
SKKKS+D DEDGKKKKQKKKKDPNAPKR MSGF+FFSQMERENIKK+NPGI+FTDV ++L
Sbjct: 538 SKKKSKDADEDGKKKKQKKKKDPNAPKRGMSGFMFFSQMERENIKKANPGISFTDVAKLL 597
Query: 476 GERWKKMSVEEREPYESKARADKKRYKDEISGYK-NPKPMDIDSGNESDSA 525
GE WKKMS EE+EPYE+KAR DKKRY+DE Y P+PM+IDSGNESDSA
Sbjct: 598 GENWKKMSAEEKEPYEAKARVDKKRYEDEKIVYNAQPQPMNIDSGNESDSA 648
>gi|2495256|sp|Q39601.1|SSRP1_CATRO RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=Recombination signal sequence recognition protein 1
gi|433872|emb|CAA82251.1| HMG protein [Catharanthus roseus]
Length = 639
Score = 832 bits (2148), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/525 (81%), Positives = 466/525 (88%), Gaps = 3/525 (0%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
MLTF+VG KQAFEVSLADV+QTQLQGKNDV+LEF K+SLMEISFH+PNSNT
Sbjct: 118 MLTFLVGSKQAFEVSLADVAQTQLQGKNDVMLEFMWMILLEQMRKNSLMEISFHVPNSNT 177
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
QFVGDEN PPAQVFRDKIMSMADVGAGGE+AVVTFEGIAILTPRGRY+VELHLSFLRLQG
Sbjct: 178 QFVGDENRPPAQVFRDKIMSMADVGAGGEDAVVTFEGIAILTPRGRYNVELHLSFLRLQG 237
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVV S L
Sbjct: 238 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVDSSL 297
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
+SE+LL+TKYKDKLEP+YKGLIHEVFT ILRGLSGAK+T+PGKFRS QDGYAVKSSLKA
Sbjct: 298 SISEDLLSTKYKDKLEPTYKGLIHEVFTMILRGLSGAKVTRPGKFRSCQDGYAVKSSLKA 357
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR
Sbjct: 358 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 417
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
NIQRNEYHNLFDFIS KGLKIMNLG K D + AVLQEDDDDAVDPHLERIKNEAGGDE
Sbjct: 418 NIQRNEYHNLFDFISSKGLKIMNLGADKAADAITAVLQEDDDDAVDPHLERIKNEAGGDE 477
Query: 361 SDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSSVKASTSKKKS 420
SDEED DFVAD DD GSPTDDSGE +SD S+SG E E P KK+ KKE+S+ K S+KK
Sbjct: 478 SDEEDEDFVADIDDEGSPTDDSGEGESDGSDSGNE-EIPTKKKPKKEASAPKVPLSRKKV 536
Query: 421 RDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWK 480
D D++ KKKKQKKKKDPNAPK ++S F+FFSQ EREN+KK NPGIAFTDVG+VLG+R
Sbjct: 537 GD-DDNMKKKKQKKKKDPNAPK-SISAFMFFSQTERENVKKDNPGIAFTDVGKVLGDRCN 594
Query: 481 KMSVEEREPYESKARADKKRYKDEISGYKNPKPMDIDSGNESDSA 525
K + ++ + + ADKKRY DEIS YKNP+PM++DSGN+SDSA
Sbjct: 595 KCQLRKKHLLKQRLVADKKRYTDEISNYKNPQPMNVDSGNDSDSA 639
>gi|224077702|ref|XP_002305370.1| high mobility group family [Populus trichocarpa]
gi|222848334|gb|EEE85881.1| high mobility group family [Populus trichocarpa]
Length = 644
Score = 823 bits (2125), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/532 (81%), Positives = 471/532 (88%), Gaps = 12/532 (2%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGAN------EKDSLMEISFH 54
MLTF+VG KQAFEVSLADVSQTQ+QGKNDVILE D +N +KDSLME+SFH
Sbjct: 117 MLTFLVGSKQAFEVSLADVSQTQMQGKNDVILEI---DAIISNYILLCLQKDSLMELSFH 173
Query: 55 IPNSNTQFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLS 114
IPN+NTQ++GDENHPPAQVFRD I+ ADVGAGGEEAVVTFEGIAILTPRGRYSVELHLS
Sbjct: 174 IPNNNTQYIGDENHPPAQVFRDLIVQKADVGAGGEEAVVTFEGIAILTPRGRYSVELHLS 233
Query: 115 FLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDY 174
FLRLQGQANDFKIQYSSVVRLFLLPK NQPHTFVVVTLDPPIRKGQTLYPHIVLQF+TD+
Sbjct: 234 FLRLQGQANDFKIQYSSVVRLFLLPKFNQPHTFVVVTLDPPIRKGQTLYPHIVLQFDTDF 293
Query: 175 VVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAV 234
VVQS L MSE+LL TKYKDKLEPSYKGLIHEVFTTILRGLS AK+T+PGKFRS QDGYAV
Sbjct: 294 VVQSNLSMSEDLLYTKYKDKLEPSYKGLIHEVFTTILRGLSSAKVTRPGKFRSCQDGYAV 353
Query: 235 KSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTE 294
KSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTE
Sbjct: 354 KSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTE 413
Query: 295 QEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKN 354
QEHLFRNIQRNEYHNLFDFISGKG+KIMNLGDM+T GVAAVLQ DDDDAVDPHL RI+N
Sbjct: 414 QEHLFRNIQRNEYHNLFDFISGKGMKIMNLGDMQTAKGVAAVLQNDDDDAVDPHLARIRN 473
Query: 355 EAGGDESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSSVKAS 414
EAG DESDEED DFV KDDGGSPTDDSGEE+SDASESG EKE P KK+ K+E SS KA
Sbjct: 474 EAGDDESDEEDEDFVLGKDDGGSPTDDSGEEESDASESGDEKENPGKKDFKREVSSSKAV 533
Query: 415 TSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRV 474
T K+KSRDG+E KK+K KKKKDPNAPKR+ S ++FFSQMEREN+KKSNPGI F ++ +
Sbjct: 534 T-KRKSRDGEESQKKRKPKKKKDPNAPKRSKSAYVFFSQMERENVKKSNPGIVFGEITKA 592
Query: 475 LGERWKKMSVEEREPYESKARADKKRYKDEISGY--KNPKPMDIDSGNESDS 524
L ++W MS EE+EPYE AR DK+RYK +++ Y KNP+PM +DSG ESDS
Sbjct: 593 LADKWNAMSAEEKEPYEEMARDDKQRYKSQVNDYKNKNPQPMMVDSGYESDS 644
>gi|224141351|ref|XP_002324036.1| high mobility group family [Populus trichocarpa]
gi|222867038|gb|EEF04169.1| high mobility group family [Populus trichocarpa]
Length = 610
Score = 820 bits (2119), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/524 (78%), Positives = 453/524 (86%), Gaps = 30/524 (5%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
MLTF+VG KQAFEVSLADVSQTQ+QGKNDVILEFHVDDTTGANEKDSLME+SFHIPN+NT
Sbjct: 117 MLTFLVGSKQAFEVSLADVSQTQMQGKNDVILEFHVDDTTGANEKDSLMELSFHIPNNNT 176
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
Q++GDENHPPAQVFRD I+ ADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG
Sbjct: 177 QYIGDENHPPAQVFRDLIVQRADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 236
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
QANDFKIQYSSVVRLFLLPK NQPHTFVVVTLDPPIRKGQTLYPHIVLQF+TD+VVQS L
Sbjct: 237 QANDFKIQYSSVVRLFLLPKFNQPHTFVVVTLDPPIRKGQTLYPHIVLQFDTDFVVQSNL 296
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
MSE+LL TKYKDKLEPSYKGLIHEVFTT++RGLS AK+T+PGKFRS QDGYAVKSSLKA
Sbjct: 297 SMSEDLLYTKYKDKLEPSYKGLIHEVFTTVMRGLSAAKVTRPGKFRSCQDGYAVKSSLKA 356
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR
Sbjct: 357 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 416
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
NIQRNEYHNLFDFISGKGLKIMNLGDM+TT GVAAVLQ DDDDAVDPHL RI+NEAG DE
Sbjct: 417 NIQRNEYHNLFDFISGKGLKIMNLGDMQTTKGVAAVLQNDDDDAVDPHLARIRNEAGDDE 476
Query: 361 SDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSSVKASTSKKKS 420
SD+E K P KK+ K+E+SS KA T+K+KS
Sbjct: 477 SDDE-----------------------------AMKVNPTKKDFKREASSSKA-TTKRKS 506
Query: 421 RDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWK 480
RDG+E KK+K KKKKDPNAPKR+ S ++FFSQMEREN++KSNPGI F ++ + L ++W
Sbjct: 507 RDGEESQKKRKPKKKKDPNAPKRSKSAYMFFSQMERENVRKSNPGIVFGEIAKALADKWN 566
Query: 481 KMSVEEREPYESKARADKKRYKDEISGYKNPKPMDIDSGNESDS 524
MS EE+EPYE AR DKKRYK +++ YKNP+PM +DS NESDS
Sbjct: 567 AMSAEEKEPYEEMARNDKKRYKLQVNDYKNPQPMMVDSENESDS 610
>gi|297815172|ref|XP_002875469.1| high mobility group, structure-specific recognition protein 1
[Arabidopsis lyrata subsp. lyrata]
gi|297321307|gb|EFH51728.1| high mobility group, structure-specific recognition protein 1
[Arabidopsis lyrata subsp. lyrata]
Length = 645
Score = 805 bits (2080), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/526 (78%), Positives = 470/526 (89%), Gaps = 3/526 (0%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQ 61
LTF+VG KQAFEVSLADVSQTQ+QGK+DV LEFHVDDT GANEKDSLMEI FHIP+SNTQ
Sbjct: 119 LTFLVGSKQAFEVSLADVSQTQIQGKDDVTLEFHVDDTAGANEKDSLMEICFHIPSSNTQ 178
Query: 62 FVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQ 121
FVGDEN PP+ VF D I++MADV +G E+AVVTF+ IAILTPRGRYSVELHLSFLRLQGQ
Sbjct: 179 FVGDENRPPSHVFNDTIVAMADVSSGVEDAVVTFDSIAILTPRGRYSVELHLSFLRLQGQ 238
Query: 122 ANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELL 181
ANDFKIQYSSVVRLFLLPKSNQPHTFVV++LDPPIRKGQT+YPHIV+QFETD VV+SEL
Sbjct: 239 ANDFKIQYSSVVRLFLLPKSNQPHTFVVISLDPPIRKGQTMYPHIVMQFETDTVVESELS 298
Query: 182 MSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAE 241
+S++L+NTK+KDKLE SYKGLIHEVFTT+LR LSGAKITKPGKFRS+QDG+AVKSSLKAE
Sbjct: 299 ISDDLMNTKFKDKLERSYKGLIHEVFTTVLRWLSGAKITKPGKFRSSQDGFAVKSSLKAE 358
Query: 242 DGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRN 301
DGVLYPLEK FFFLPKPPTLILH+EIDYVEFERHAAGG+NMHYFDLLIRLKT+ EHLFRN
Sbjct: 359 DGVLYPLEKGFFFLPKPPTLILHDEIDYVEFERHAAGGANMHYFDLLIRLKTDHEHLFRN 418
Query: 302 IQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVL-QEDDDDAVDPHLERIKNEAGGDE 360
IQRNEYHNL+ FIS KGLKIMNLG TTDGVAAVL +DDDDAVDPHLERIKN+A +
Sbjct: 419 IQRNEYHNLYTFISSKGLKIMNLGGAGTTDGVAAVLGDDDDDDAVDPHLERIKNQAADES 478
Query: 361 SDEEDSDFVADKDDGGSPTDDSGEEDSDASE-SGGEKEKPAKKESKKESSSVKASTSKKK 419
+E++ + + DDGGSPTDDSGE+DSDASE GGEKEK KKE KKE+SS K K+K
Sbjct: 479 DEEDEDFVMGEDDDGGSPTDDSGEDDSDASEGGGGEKEKSIKKEPKKEASSSKGLPHKRK 538
Query: 420 SRDGDE-DGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGER 478
DE K+KK KKKKDPNAPKRAMSGF++FSQMER+NIKK +PGIAF +VG+VLG++
Sbjct: 539 VSAADEGSSKRKKPKKKKDPNAPKRAMSGFMYFSQMERDNIKKEHPGIAFGEVGKVLGDK 598
Query: 479 WKKMSVEEREPYESKARADKKRYKDEISGYKNPKPMDIDSGNESDS 524
W++MS EE+EPYE+KA+ DK+RYKDEIS YKNP+P+++DSGNESDS
Sbjct: 599 WRQMSAEEKEPYEAKAQVDKQRYKDEISDYKNPQPVNVDSGNESDS 644
>gi|15228471|ref|NP_189515.1| FACT complex subunit SSRP1 [Arabidopsis thaliana]
gi|26454672|sp|Q05153.2|SSRP1_ARATH RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=High mobility group B protein 8; AltName:
Full=Nucleosome/chromatin assembly factor group D 08;
Short=Nucleosome/chromatin assembly factor group D 8;
AltName: Full=Recombination signal sequence recognition
protein 1
gi|11994780|dbj|BAB03170.1| structure-specific recognition protein 1 (HMG1 DNA-binding protein)
[Arabidopsis thaliana]
gi|27311803|gb|AAO00867.1| recombination signal sequence recognition protein, putative
[Arabidopsis thaliana]
gi|332643963|gb|AEE77484.1| FACT complex subunit SSRP1 [Arabidopsis thaliana]
Length = 646
Score = 777 bits (2007), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/527 (78%), Positives = 468/527 (88%), Gaps = 4/527 (0%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQ 61
LTF+VG KQAFEVSLADVSQTQLQGKNDV LEFHVDDT GANEKDSLMEISFHIPNSNTQ
Sbjct: 119 LTFLVGSKQAFEVSLADVSQTQLQGKNDVTLEFHVDDTAGANEKDSLMEISFHIPNSNTQ 178
Query: 62 FVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQ 121
FVGDEN PP+QVF D I++MADV G E+AVVTFE IAILTPRGRY+VELHLSFLRLQGQ
Sbjct: 179 FVGDENRPPSQVFNDTIVAMADVSPGVEDAVVTFESIAILTPRGRYNVELHLSFLRLQGQ 238
Query: 122 ANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELL 181
ANDFKIQYSSVVRLFLLPKSNQPHTFVV++LDPPIRKGQT+YPHIV+QFETD VV+SEL
Sbjct: 239 ANDFKIQYSSVVRLFLLPKSNQPHTFVVISLDPPIRKGQTMYPHIVMQFETDTVVESELS 298
Query: 182 MSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAE 241
+S+EL+NTK+KDKLE SYKGLIHEVFTT+LR LSGAKITKPGKFRS+QDG+AVKSSLKAE
Sbjct: 299 ISDELMNTKFKDKLERSYKGLIHEVFTTVLRWLSGAKITKPGKFRSSQDGFAVKSSLKAE 358
Query: 242 DGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRN 301
DGVLYPLEK FFFLPKPPTLILH+EIDYVEFERHAAGG+NMHYFDLLIRLKT+ EHLFRN
Sbjct: 359 DGVLYPLEKGFFFLPKPPTLILHDEIDYVEFERHAAGGANMHYFDLLIRLKTDHEHLFRN 418
Query: 302 IQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVL-QEDDDDAVDPHLERIKNEAGGDE 360
IQRNEYHNL+ FIS KGLKIMNLG T DGVAAVL DDDDAVDPHL RI+N+A +
Sbjct: 419 IQRNEYHNLYTFISSKGLKIMNLGGAGTADGVAAVLGDNDDDDAVDPHLTRIRNQAADES 478
Query: 361 SDEEDSDFVADKDDGGSPTDDSGEEDSDASESG-GE-KEKPAKKESKKESSSVKASTSKK 418
+E++ + + DDGGSPTDDSG +DSDASE G GE KEK KKE KKE+SS K K+
Sbjct: 479 DEEDEDFVMGEDDDGGSPTDDSGGDDSDASEGGVGEIKEKSIKKEPKKEASSSKGLPPKR 538
Query: 419 KSRDGDE-DGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGE 477
K+ DE K+KK KKKKDPNAPKRAMSGF+FFSQMER+NIKK +PGIAF +VG+VLG+
Sbjct: 539 KTVAADEGSSKRKKPKKKKDPNAPKRAMSGFMFFSQMERDNIKKEHPGIAFGEVGKVLGD 598
Query: 478 RWKKMSVEEREPYESKARADKKRYKDEISGYKNPKPMDIDSGNESDS 524
+W++MS +++EPYE+KA+ DK+RYKDEIS YKNP+PM++DSGN+SDS
Sbjct: 599 KWRQMSADDKEPYEAKAQVDKQRYKDEISDYKNPQPMNVDSGNDSDS 645
>gi|312281655|dbj|BAJ33693.1| unnamed protein product [Thellungiella halophila]
Length = 646
Score = 771 bits (1992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/527 (76%), Positives = 457/527 (86%), Gaps = 4/527 (0%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQ 61
LTF VG KQAFEVSLADVSQTQLQGK DV+LEFHVDDT GANEKDSLMEISFH+PNSNTQ
Sbjct: 119 LTFSVGAKQAFEVSLADVSQTQLQGKTDVLLEFHVDDTAGANEKDSLMEISFHVPNSNTQ 178
Query: 62 FVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQ 121
FVGDEN AQV D+I +ADVGAG EEAV TF+GIAILTPRGRY+VELHLSFLRL GQ
Sbjct: 179 FVGDENRTSAQVLCDEIKVVADVGAGFEEAVATFDGIAILTPRGRYNVELHLSFLRLNGQ 238
Query: 122 ANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELL 181
ANDFKIQYSSVVRLFLLPKSNQPHTFVV++LDPPIRKGQT+YPHIV+QFETD VV+SEL
Sbjct: 239 ANDFKIQYSSVVRLFLLPKSNQPHTFVVISLDPPIRKGQTMYPHIVMQFETDSVVESELS 298
Query: 182 MSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAE 241
+S++L+NTK+KDKLE SYKGLIHEVFTT+LR LSGAKITKPGKFRSAQDG+AVKSSLKAE
Sbjct: 299 ISDDLMNTKFKDKLERSYKGLIHEVFTTVLRWLSGAKITKPGKFRSAQDGFAVKSSLKAE 358
Query: 242 DGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRN 301
DGVLYPLEK FFFLPKPPTLILH+EI+YVEFERHAAGG+NMHYFDLLIRLK++ EHLFRN
Sbjct: 359 DGVLYPLEKGFFFLPKPPTLILHDEIEYVEFERHAAGGANMHYFDLLIRLKSDHEHLFRN 418
Query: 302 IQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQ-EDDDDAVDPHLERIKNEAGGDE 360
IQRNEYHNL+ FISGKGLKIMNLG TTDGVAAVL+ DDDDAVDPHLERI+N+A +
Sbjct: 419 IQRNEYHNLYSFISGKGLKIMNLGGAGTTDGVAAVLRDNDDDDAVDPHLERIRNQAADES 478
Query: 361 SDEEDSDFVADKDDGGSPT-DDSGEEDSDASESGGEKEKPAKKESKKESSSVKASTSKKK 419
+E++ + + DDGGSPT + ++ + GGEKEK KKE K+E+SS KK
Sbjct: 479 DEEDEDFVMGEDDDGGSPTDESGEDDSDGSDGGGGEKEKSIKKEPKREASSSSKGLPPKK 538
Query: 420 SRDGDEDGKK--KKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGE 477
E+G +KQKKKKDPNAPKRAMSGF+FFSQMER+NIKK++PGIAF +VG+VLG+
Sbjct: 539 KALVTEEGSSKKRKQKKKKDPNAPKRAMSGFMFFSQMERDNIKKTHPGIAFGEVGKVLGD 598
Query: 478 RWKKMSVEEREPYESKARADKKRYKDEISGYKNPKPMDIDSGNESDS 524
+W++MS EE+EPYE+KA+ DKKRYKDEIS YKNP+PM +DS NESDS
Sbjct: 599 KWRQMSAEEKEPYEAKAQVDKKRYKDEISDYKNPQPMLVDSENESDS 645
>gi|21314337|gb|AAM46895.1|AF503585_1 early drought induced protein [Oryza sativa Indica Group]
gi|218187645|gb|EEC70072.1| hypothetical protein OsI_00684 [Oryza sativa Indica Group]
Length = 641
Score = 731 bits (1886), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/529 (72%), Positives = 446/529 (84%), Gaps = 11/529 (2%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
MLTFMVG KQAFEVSLADVSQTQ+QGK DV+LEFHVDDTTG NEKDSLM++SFH+P SNT
Sbjct: 118 MLTFMVGSKQAFEVSLADVSQTQMQGKTDVLLEFHVDDTTGGNEKDSLMDLSFHVPTSNT 177
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
QF+GDEN AQV + IM +ADV + EEAVVTFEGIAILTPRGRYSVELHLSFLRLQG
Sbjct: 178 QFLGDENRTAAQVLWETIMGVADVDSS-EEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 236
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
QANDFKIQYSS+VRLFLLPKSN PHTFVVVTLDPPIRKGQTLYPHIV+QFET+ VV+ L
Sbjct: 237 QANDFKIQYSSIVRLFLLPKSNNPHTFVVVTLDPPIRKGQTLYPHIVIQFETEAVVERNL 296
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
+++E+L KYKD+LE SYKGLIHEVFT +LRGLSGAK+T+PG FRS QDGYAVKSSLKA
Sbjct: 297 ALTKEVLAEKYKDRLEESYKGLIHEVFTKVLRGLSGAKVTRPGSFRSCQDGYAVKSSLKA 356
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNM--HYFDLLIRLKTEQEHL 298
EDG+LYPLEK FFFLPKPPTLILHEEI++VEFERH AGG+++ HYFDLL++LK +QEHL
Sbjct: 357 EDGLLYPLEKGFFFLPKPPTLILHEEIEFVEFERHGAGGASISSHYFDLLVKLKNDQEHL 416
Query: 299 FRNIQRNEYHNLFDFISGKGLKIMNLGDMK-TTDGVAAVLQEDDDDAVDPHLERIKNEAG 357
FRNIQR+EYHNLF+FI+GK LKIMNLGD + T GV AVL++ DDDAVDPHLERIKN+AG
Sbjct: 417 FRNIQRSEYHNLFNFINGKHLKIMNLGDGQGATGGVTAVLRDTDDDAVDPHLERIKNQAG 476
Query: 358 GDESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSSVKASTSK 417
+ESDEED DFVADKDD GSPTDDSG EDSDASESGGEKEK +KKE+ VK K
Sbjct: 477 DEESDEEDEDFVADKDDSGSPTDDSGGEDSDASESGGEKEKLSKKEASSSKPPVK---RK 533
Query: 418 KKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGE 477
K RD +E +K+K KKKKDPNAPKRAM+ F++FS ER N+K +NP + T++ + LGE
Sbjct: 534 PKGRD-EEGSEKRKPKKKKDPNAPKRAMTPFMYFSMAERGNMKNNNPDLPTTEIAKKLGE 592
Query: 478 RWKKMSVEEREPYESKARADKKRYKDEISGYKNPKPMDIDS---GNESD 523
W+KM+ EE++PY +++ DKKRY+ E + Y+ MD+DS GNESD
Sbjct: 593 MWQKMTGEEKQPYIQQSQVDKKRYEKESAVYRGAAAMDVDSGSGGNESD 641
>gi|115434958|ref|NP_001042237.1| Os01g0184900 [Oryza sativa Japonica Group]
gi|75263890|sp|Q9LGR0.1|SSP1A_ORYSJ RecName: Full=FACT complex subunit SSRP1-A; AltName: Full=Early
drought-induced protein R1G1A; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1-A;
AltName: Full=Recombination signal sequence recognition
protein 1-A
gi|9558422|dbj|BAB03358.1| putative SSRP1 protein [Oryza sativa Japonica Group]
gi|113531768|dbj|BAF04151.1| Os01g0184900 [Oryza sativa Japonica Group]
gi|215694954|dbj|BAG90145.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222617877|gb|EEE54009.1| hypothetical protein OsJ_00664 [Oryza sativa Japonica Group]
Length = 641
Score = 730 bits (1884), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/529 (72%), Positives = 445/529 (84%), Gaps = 11/529 (2%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
MLTFMVG KQAFEVSLADVSQTQ+QGK DV+LEFHVDDTTG NEKDSLM++SFH+P SNT
Sbjct: 118 MLTFMVGSKQAFEVSLADVSQTQMQGKTDVLLEFHVDDTTGGNEKDSLMDLSFHVPTSNT 177
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
QF+GDEN AQV + IM +ADV + EEAVVTFEGIAILTPRGRYSVELHLSFLRLQG
Sbjct: 178 QFLGDENRTAAQVLWETIMGVADVDSS-EEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 236
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
QANDFKIQYSS+VRLFLLPKSN PHTFVVVTLDPPIRKGQTLYPHIV+QFET+ VV+ L
Sbjct: 237 QANDFKIQYSSIVRLFLLPKSNNPHTFVVVTLDPPIRKGQTLYPHIVIQFETEAVVERNL 296
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
+++E+L KYKD+LE SYKGLIHEVFT +LRGLSGAK+T+PG FRS QDGYAVKSSLKA
Sbjct: 297 ALTKEVLAEKYKDRLEESYKGLIHEVFTKVLRGLSGAKVTRPGSFRSCQDGYAVKSSLKA 356
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNM--HYFDLLIRLKTEQEHL 298
EDG+LYPLEK FFFLPKPPTLILHEEI++VEFERH AGG+++ HYFDLL++LK +QEHL
Sbjct: 357 EDGLLYPLEKGFFFLPKPPTLILHEEIEFVEFERHGAGGASISSHYFDLLVKLKNDQEHL 416
Query: 299 FRNIQRNEYHNLFDFISGKGLKIMNLGDMK-TTDGVAAVLQEDDDDAVDPHLERIKNEAG 357
FRNIQR+EYHNLF+FI+GK LKIMNLGD + T GV AVL++ DDDAVDPHLERIKN+AG
Sbjct: 417 FRNIQRSEYHNLFNFINGKHLKIMNLGDGQGATGGVTAVLRDTDDDAVDPHLERIKNQAG 476
Query: 358 GDESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSSVKASTSK 417
+ESDEED DFVADKDD GSPTDDSG EDSDASESGGEKEK +KKE+ VK K
Sbjct: 477 DEESDEEDEDFVADKDDSGSPTDDSGGEDSDASESGGEKEKLSKKEASSSKPPVK---RK 533
Query: 418 KKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGE 477
K RD +E K+K KKKKDPNAPKRAM+ F++FS ER N+K +NP + T++ + LGE
Sbjct: 534 PKGRD-EEGSDKRKPKKKKDPNAPKRAMTPFMYFSMAERGNMKNNNPDLPTTEIAKKLGE 592
Query: 478 RWKKMSVEEREPYESKARADKKRYKDEISGYKNPKPMDIDS---GNESD 523
W+KM+ EE++PY +++ DKKRY+ E + Y+ MD+DS GNESD
Sbjct: 593 MWQKMTGEEKQPYIQQSQVDKKRYEKESAVYRGAAAMDVDSGSGGNESD 641
>gi|242056143|ref|XP_002457217.1| hypothetical protein SORBIDRAFT_03g003450 [Sorghum bicolor]
gi|241929192|gb|EES02337.1| hypothetical protein SORBIDRAFT_03g003450 [Sorghum bicolor]
Length = 639
Score = 729 bits (1881), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/527 (72%), Positives = 445/527 (84%), Gaps = 9/527 (1%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
MLTFMVG KQAFEVSLADV+QTQ+QGK DV+LE HVDDTTGANEKDSLM++SFH+P SNT
Sbjct: 118 MLTFMVGSKQAFEVSLADVAQTQMQGKTDVLLELHVDDTTGANEKDSLMDLSFHVPTSNT 177
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
QFVGDEN PPA + + I+ ADVG+ EE VVTF+GIAILTPRGRYSVELHLSFLRLQG
Sbjct: 178 QFVGDENRPPAHILWETILKFADVGSS-EEPVVTFDGIAILTPRGRYSVELHLSFLRLQG 236
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
QANDFKIQYSS+VRLFLLPKSN PHTFVV+TLDPPIRKGQTLYPHIV+QFET+ VV+ +L
Sbjct: 237 QANDFKIQYSSIVRLFLLPKSNNPHTFVVITLDPPIRKGQTLYPHIVIQFETEAVVERDL 296
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
+S+ELL KYKD+LE SYKGLIHEVFT +LRGLSGAK+T+PG FRS QDGYAVKSSLKA
Sbjct: 297 ALSKELLVDKYKDRLEESYKGLIHEVFTKVLRGLSGAKVTRPGSFRSCQDGYAVKSSLKA 356
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNM--HYFDLLIRLKTEQEHL 298
EDG+LYPLEK FFFLPKPPTLILHEEI++VEFERH AGG+++ HYFDLL++LK +QEHL
Sbjct: 357 EDGLLYPLEKGFFFLPKPPTLILHEEIEFVEFERHGAGGASISFHYFDLLVKLKNDQEHL 416
Query: 299 FRNIQRNEYHNLFDFISGKGLKIMNL-GDMKTTDGVAA-VLQEDDDDAVDPHLERIKNEA 356
FRNIQRNEYHNLF+FI+GK +KIMNL GD + GV VL++ DDDAVDPHLERIKN+A
Sbjct: 417 FRNIQRNEYHNLFNFINGKNIKIMNLGGDGQGASGVVTDVLRDTDDDAVDPHLERIKNQA 476
Query: 357 GGDESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSSVKASTS 416
G DESDEED DFVADKDD GSPTDDSG+EDSDAS+SGGEKEK +KKE+ K
Sbjct: 477 GDDESDEEDEDFVADKDDSGSPTDDSGDEDSDASDSGGEKEKSSKKEASSSKPVQK---R 533
Query: 417 KKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLG 476
K K+RD DE +KKK KKKKDPNAPKRAM+ F++FS ER N+K SNP + T++ + LG
Sbjct: 534 KPKARD-DEGHEKKKAKKKKDPNAPKRAMTPFMYFSMAERGNMKSSNPDLPTTEIAKKLG 592
Query: 477 ERWKKMSVEEREPYESKARADKKRYKDEISGYKNPKPMDIDSGNESD 523
E W+KMS EE++PY +A+ DKKRY+ E + Y+ D+DSGNESD
Sbjct: 593 EMWQKMSSEEKQPYIQQAQVDKKRYEKESAVYRGEATADVDSGNESD 639
>gi|217853|dbj|BAA02719.1| high mobility group protein [Arabidopsis thaliana]
Length = 644
Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/525 (74%), Positives = 445/525 (84%), Gaps = 4/525 (0%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQ 61
LTF+VG KQAFEVSLADVSQTQLQGKNDV LEF + K LMEISFHIPNSNTQ
Sbjct: 119 LTFLVGSKQAFEVSLADVSQTQLQGKNDVTLEFMLMILLVLMRKTPLMEISFHIPNSNTQ 178
Query: 62 FVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQ 121
FVGDEN PP+QVF D I++MADV G E+AVVTFE IAILTPRGRY+VELHLSFLRLQ Q
Sbjct: 179 FVGDENRPPSQVFNDTIVAMADVSPGVEDAVVTFESIAILTPRGRYNVELHLSFLRLQEQ 238
Query: 122 ANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELL 181
ANDFKIQYSSVVRLFLLPKSNQPHTFVV++LDPPIRKGQT+YPHIV+QFETD VV+SEL
Sbjct: 239 ANDFKIQYSSVVRLFLLPKSNQPHTFVVISLDPPIRKGQTMYPHIVMQFETDTVVESELS 298
Query: 182 MSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAE 241
+S+EL+NTK+KDKLE SYKGLIHEVFTT+LR LSGAKITKPGKFRS+QDG+AVKSSLKAE
Sbjct: 299 ISDELMNTKFKDKLERSYKGLIHEVFTTVLRWLSGAKITKPGKFRSSQDGFAVKSSLKAE 358
Query: 242 DGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRN 301
DGVLYPLEK FFFLPKPPTLILH+EIDYVEFERHAAGG+NMHYFDLLIRLKT+ EHLFRN
Sbjct: 359 DGVLYPLEKGFFFLPKPPTLILHDEIDYVEFERHAAGGANMHYFDLLIRLKTDHEHLFRN 418
Query: 302 IQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVL-QEDDDDAVDPHLERIKNEAGGDE 360
IQRNEYHNL+ FIS KGLKIMNLG T DGVAAVL DDDDAVDPHL RI+N+A +
Sbjct: 419 IQRNEYHNLYTFISSKGLKIMNLGGAGTADGVAAVLGDNDDDDAVDPHLTRIRNQAADES 478
Query: 361 SDEEDSDFVADKDDGGSPTDDSGEEDSDASESG-GE-KEKPAKKESKKESSSVKASTSKK 418
+E++ + + DDGGSPTDDSG +DSDASE G GE KEK KKE KKE+SS K K+
Sbjct: 479 DEEDEDFVMGEDDDGGSPTDDSGGDDSDASEGGVGEIKEKSIKKEPKKEASSSKGLPPKR 538
Query: 419 KSRDGDE-DGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGE 477
K+ DE K+KK KKKKDPNAPKRAMSGF+FFSQMER+NIKK +PGIAF +VG+VLG+
Sbjct: 539 KTVAADEGSSKRKKPKKKKDPNAPKRAMSGFMFFSQMERDNIKKEHPGIAFGEVGKVLGD 598
Query: 478 RWKKMSVEEREPYESKARADKKRYKDEISGYKNPKPMDIDSGNES 522
+ K + + + + + DK+RYKDEIS YKNP+PM++DSGN+S
Sbjct: 599 KCVKCLLMIKSHMKPRLQVDKQRYKDEISDYKNPQPMNVDSGNDS 643
>gi|326513318|dbj|BAK06899.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 655
Score = 715 bits (1845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/543 (66%), Positives = 429/543 (79%), Gaps = 25/543 (4%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
MLTFMVG KQAFE SLADVSQTQLQGK DV+LEFHVDDTTGANEKDSLM++SFH+P SNT
Sbjct: 118 MLTFMVGSKQAFEFSLADVSQTQLQGKTDVLLEFHVDDTTGANEKDSLMDMSFHVPTSNT 177
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGE-EAVVTFEGIAILTPRGRYSVELHLSFLRLQ 119
QF G+EN AQ+ + I+ AD +G EAVVTFEGIAILTPRGRY+V+LHLSFLRLQ
Sbjct: 178 QFPGNENRTSAQILLEAILERADTSSGSSGEAVVTFEGIAILTPRGRYAVDLHLSFLRLQ 237
Query: 120 GQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSE 179
GQANDFKIQYSS+VRLFLLPKSN PHT VVVTLDPPIRKGQTLYPHIV+QFET+ VVQ
Sbjct: 238 GQANDFKIQYSSIVRLFLLPKSNNPHTIVVVTLDPPIRKGQTLYPHIVIQFETETVVQKN 297
Query: 180 LLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLK 239
+ +S ELL+ KYKD+LE SY+GL+HEVF +LRGLSGAK+T+PG FRS ++GYAVKSSLK
Sbjct: 298 MKLSRELLDEKYKDRLEESYQGLVHEVFVKVLRGLSGAKVTRPGSFRSYKNGYAVKSSLK 357
Query: 240 AEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNM--HYFDLLIRLKTEQEH 297
AEDG+LYPLEK FFFLPKPPTLILHEEI++VEF+RH AGG++M YFDLL++L +QEH
Sbjct: 358 AEDGLLYPLEKGFFFLPKPPTLILHEEIEFVEFQRHGAGGASMSSQYFDLLVKLTNDQEH 417
Query: 298 LFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAG 357
LFRNIQR+EYHNLF+FI+GKGLK+MNLGD + T GV VL++ DD A DPHLERIKN+A
Sbjct: 418 LFRNIQRSEYHNLFNFINGKGLKVMNLGDGQGTSGVTDVLRDTDDVAPDPHLERIKNQAV 477
Query: 358 GDE-SDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSSVKASTS 416
E SDEED DFV KDDGGSPTDDSG E+SDASESGGEKEK +KKE++ VK
Sbjct: 478 SSEASDEEDEDFVLHKDDGGSPTDDSGGEESDASESGGEKEKSSKKEARSSKPPVK---R 534
Query: 417 KKKSRDGDEDGKKKKQKKKKDPNAPK--------------RAMSGFIFFSQMERENIKKS 462
K K +DG +G +K++ K KD + R M F++FS ER +K S
Sbjct: 535 KPKGKDG--EGSEKRKPKGKDGEGSEKRKPKKKKDPNAPKRPMMPFMYFSMAERAGVKDS 592
Query: 463 NPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYKNPKPMDID--SGN 520
NP +A TDV + LGE W+KMS E+++PY +++ADKKRY+ E + Y+ P+D+D SGN
Sbjct: 593 NPDLAPTDVAKKLGEMWQKMSTEDKQPYILQSQADKKRYEKESAAYRAAAPVDVDAGSGN 652
Query: 521 ESD 523
SD
Sbjct: 653 GSD 655
>gi|363543425|ref|NP_001241722.1| structure-specific recognition protein 1 [Zea mays]
gi|195604724|gb|ACG24192.1| structure-specific recognition protein 1 [Zea mays]
Length = 651
Score = 710 bits (1833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/527 (72%), Positives = 445/527 (84%), Gaps = 9/527 (1%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
MLTFMVG KQAFEVSL DV+QTQ+QGK DV+LE HVDDTTGANEKDSLM++SFH+P SNT
Sbjct: 130 MLTFMVGSKQAFEVSLPDVAQTQMQGKTDVLLELHVDDTTGANEKDSLMDLSFHVPTSNT 189
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
QFVGDE+ PPA + + I+ ADVG+ EE VVTFEGIAILTPRGRYSVELHLSFLRLQG
Sbjct: 190 QFVGDESRPPAHILWETILKFADVGSS-EEPVVTFEGIAILTPRGRYSVELHLSFLRLQG 248
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
QANDFKIQYSS+VRLFLLPKSN PHTFVV+TLDPPIRKGQTLYPHIV+QFET+ VV+ +L
Sbjct: 249 QANDFKIQYSSIVRLFLLPKSNNPHTFVVITLDPPIRKGQTLYPHIVIQFETEAVVERDL 308
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
+S+ELL KYKD+LE SYKGLIHEVFT +LRGLSGAK+T+PG FRS QDGYAVKSSLKA
Sbjct: 309 ALSKELLVEKYKDRLEESYKGLIHEVFTKVLRGLSGAKVTRPGSFRSCQDGYAVKSSLKA 368
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNM--HYFDLLIRLKTEQEHL 298
EDG+LYPLEK FFFLPKPPTLILHEEI++VEFERH AGG+++ HYFDLL++LK +QEHL
Sbjct: 369 EDGLLYPLEKGFFFLPKPPTLILHEEIEFVEFERHGAGGASISSHYFDLLVKLKNDQEHL 428
Query: 299 FRNIQRNEYHNLFDFISGKGLKIMNL-GDMKTTDGVAA-VLQEDDDDAVDPHLERIKNEA 356
FRNIQRNEYHNLF+FI+GK +KIMNL GD + GV VL++ DDDAVDPHLERIKN+A
Sbjct: 429 FRNIQRNEYHNLFNFINGKNIKIMNLGGDGQGASGVVTDVLRDTDDDAVDPHLERIKNQA 488
Query: 357 GGDESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSSVKASTS 416
G +ESDEED DFVADKDD GSPTDDSG+E+SDAS+SGGEKEK +KKE+ K
Sbjct: 489 GDEESDEEDEDFVADKDDSGSPTDDSGDEESDASDSGGEKEKSSKKEASSSKPVQK---R 545
Query: 417 KKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLG 476
K K+RD DE +KKK KKKKDPNAPKRAM+ F++FS ER N+K SNP + T++ + LG
Sbjct: 546 KHKARD-DEGQEKKKPKKKKDPNAPKRAMTPFMYFSMAERGNMKSSNPDLPTTEIAKKLG 604
Query: 477 ERWKKMSVEEREPYESKARADKKRYKDEISGYKNPKPMDIDSGNESD 523
E W+KMS EE++PY +A+ DKKRY+ E + Y+ +D+DSGNESD
Sbjct: 605 EMWQKMSGEEKQPYIQQAQVDKKRYEKESAVYRGEATVDVDSGNESD 651
>gi|413947661|gb|AFW80310.1| structure-specific recognition protein 1 [Zea mays]
Length = 651
Score = 709 bits (1831), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/527 (72%), Positives = 444/527 (84%), Gaps = 9/527 (1%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
MLTFMVG KQAFEVSL DV+QTQ+QGK DV+LE HVDDTTGANEKDSLM++SFH+P SNT
Sbjct: 130 MLTFMVGSKQAFEVSLPDVAQTQMQGKTDVLLELHVDDTTGANEKDSLMDLSFHVPTSNT 189
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
QFVGDE+ PPA + + I+ ADVG+ EE VVTFEGIAILTPRGRYSVELHLSFLRLQG
Sbjct: 190 QFVGDESRPPAHILWETILKFADVGSS-EEPVVTFEGIAILTPRGRYSVELHLSFLRLQG 248
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
QANDFKIQYSS+VRLFLLPKSN PHTFVV+TLDPPIRKGQTLYPHIV+QFET+ VV+ +L
Sbjct: 249 QANDFKIQYSSIVRLFLLPKSNNPHTFVVITLDPPIRKGQTLYPHIVIQFETEAVVERDL 308
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
+S+ELL KYKD+LE SYKGLIHEVFT +LRGLSGAK+T+PG FRS QDGYAVKSSLKA
Sbjct: 309 ALSKELLVEKYKDRLEESYKGLIHEVFTKVLRGLSGAKVTRPGSFRSCQDGYAVKSSLKA 368
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNM--HYFDLLIRLKTEQEHL 298
EDG+LYPLEK FFFLPKPPTLILHEEI++VEFERH AGG+++ HYFDLL++LK +QEHL
Sbjct: 369 EDGLLYPLEKGFFFLPKPPTLILHEEIEFVEFERHGAGGASISSHYFDLLVKLKNDQEHL 428
Query: 299 FRNIQRNEYHNLFDFISGKGLKIMNL-GDMKTTDGVAA-VLQEDDDDAVDPHLERIKNEA 356
FRNIQRNEYHNLF+FI+GK +KIMNL GD + GV VL++ DDDAVDPHLERIKN+A
Sbjct: 429 FRNIQRNEYHNLFNFINGKNIKIMNLGGDGQGASGVVTDVLRDTDDDAVDPHLERIKNQA 488
Query: 357 GGDESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSSVKASTS 416
G +ESDEED DFVADKDD GSPTDDSG+E+SDAS+SGGEKEK +KKE+ K
Sbjct: 489 GDEESDEEDEDFVADKDDSGSPTDDSGDEESDASDSGGEKEKSSKKEASSSKPVQK---R 545
Query: 417 KKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLG 476
K K RD DE +KKK KKKKDPNAPKRAM+ F++FS ER N+K SNP + T++ + LG
Sbjct: 546 KHKGRD-DEGQEKKKPKKKKDPNAPKRAMTPFMYFSMAERGNMKSSNPDLPTTEIAKKLG 604
Query: 477 ERWKKMSVEEREPYESKARADKKRYKDEISGYKNPKPMDIDSGNESD 523
E W+KMS EE++PY +A+ DKKRY+ E + Y+ +D+DSGNESD
Sbjct: 605 EMWQKMSGEEKQPYIQQAQVDKKRYEKESAVYRGEATVDVDSGNESD 651
>gi|162462425|ref|NP_001105124.1| FACT complex subunit SSRP1 [Zea mays]
gi|75263808|sp|Q9LEF5.1|SSRP1_MAIZE RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=Recombination signal sequence recognition protein
1; AltName: Full=Zm-SSRP1
gi|8920409|emb|CAB96421.1| SSRP1 protein [Zea mays]
Length = 639
Score = 709 bits (1831), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/527 (72%), Positives = 445/527 (84%), Gaps = 9/527 (1%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
MLTFMVG KQAFEVSL DV+QTQ+QGK DV+LE HVDDTTGANEKDSLM++SFH+P SNT
Sbjct: 118 MLTFMVGSKQAFEVSLPDVAQTQMQGKTDVLLELHVDDTTGANEKDSLMDLSFHVPTSNT 177
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
QFVGDE+ PPA + + I+ ADVG+ EE VVTFEGIAILTPRGRYSVELHLSFLRLQG
Sbjct: 178 QFVGDESRPPAHILWETILKFADVGSS-EEPVVTFEGIAILTPRGRYSVELHLSFLRLQG 236
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
QANDFKIQYSS+VRLFLLPKSN PHTFVV+TLDPPIRKGQTLYPHIV+QFET+ VV+ +L
Sbjct: 237 QANDFKIQYSSIVRLFLLPKSNNPHTFVVITLDPPIRKGQTLYPHIVIQFETEAVVERDL 296
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
+S+ELL KYKD+LE SYKGLIHEVFT +LRGLSGAK+T+PG FRS QDGYAVKSSLKA
Sbjct: 297 ALSKELLVEKYKDRLEESYKGLIHEVFTKVLRGLSGAKVTRPGSFRSCQDGYAVKSSLKA 356
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNM--HYFDLLIRLKTEQEHL 298
EDG+LYPLEK FFFLPKPPTLILHEEI++VEFERH AGG+++ HYFDLL++LK +QEHL
Sbjct: 357 EDGLLYPLEKGFFFLPKPPTLILHEEIEFVEFERHGAGGASISSHYFDLLVKLKNDQEHL 416
Query: 299 FRNIQRNEYHNLFDFISGKGLKIMNL-GDMKTTDGVAA-VLQEDDDDAVDPHLERIKNEA 356
FRNIQRNEYHNLF+FI+GK +KIMNL GD + GV VL++ DDDAVDPHLERIKN+A
Sbjct: 417 FRNIQRNEYHNLFNFINGKNIKIMNLGGDGQGASGVVTDVLRDTDDDAVDPHLERIKNQA 476
Query: 357 GGDESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSSVKASTS 416
G +ESDEED DFVADKDD GSPTDDSG+E+SDAS+SGGEKEK +KKE+ K
Sbjct: 477 GDEESDEEDEDFVADKDDSGSPTDDSGDEESDASDSGGEKEKSSKKEASSSKPVQK---R 533
Query: 417 KKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLG 476
K K+RD DE +KKK KKKKDPNAPKRAM+ F++FS ER N+K SNP + T++ + LG
Sbjct: 534 KHKARD-DEGQEKKKPKKKKDPNAPKRAMTPFMYFSMAERGNMKSSNPDLPTTEIAKKLG 592
Query: 477 ERWKKMSVEEREPYESKARADKKRYKDEISGYKNPKPMDIDSGNESD 523
E W+KMS EE++PY +A+ DKKRY+ E + Y+ +D+DSGNESD
Sbjct: 593 EMWQKMSGEEKQPYIQQAQVDKKRYEKESAVYRGEATVDVDSGNESD 639
>gi|224030253|gb|ACN34202.1| unknown [Zea mays]
gi|413947660|gb|AFW80309.1| FACT complex subunit SSRP1 [Zea mays]
Length = 639
Score = 709 bits (1829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/527 (72%), Positives = 444/527 (84%), Gaps = 9/527 (1%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
MLTFMVG KQAFEVSL DV+QTQ+QGK DV+LE HVDDTTGANEKDSLM++SFH+P SNT
Sbjct: 118 MLTFMVGSKQAFEVSLPDVAQTQMQGKTDVLLELHVDDTTGANEKDSLMDLSFHVPTSNT 177
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
QFVGDE+ PPA + + I+ ADVG+ EE VVTFEGIAILTPRGRYSVELHLSFLRLQG
Sbjct: 178 QFVGDESRPPAHILWETILKFADVGSS-EEPVVTFEGIAILTPRGRYSVELHLSFLRLQG 236
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
QANDFKIQYSS+VRLFLLPKSN PHTFVV+TLDPPIRKGQTLYPHIV+QFET+ VV+ +L
Sbjct: 237 QANDFKIQYSSIVRLFLLPKSNNPHTFVVITLDPPIRKGQTLYPHIVIQFETEAVVERDL 296
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
+S+ELL KYKD+LE SYKGLIHEVFT +LRGLSGAK+T+PG FRS QDGYAVKSSLKA
Sbjct: 297 ALSKELLVEKYKDRLEESYKGLIHEVFTKVLRGLSGAKVTRPGSFRSCQDGYAVKSSLKA 356
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNM--HYFDLLIRLKTEQEHL 298
EDG+LYPLEK FFFLPKPPTLILHEEI++VEFERH AGG+++ HYFDLL++LK +QEHL
Sbjct: 357 EDGLLYPLEKGFFFLPKPPTLILHEEIEFVEFERHGAGGASISSHYFDLLVKLKNDQEHL 416
Query: 299 FRNIQRNEYHNLFDFISGKGLKIMNL-GDMKTTDGVAA-VLQEDDDDAVDPHLERIKNEA 356
FRNIQRNEYHNLF+FI+GK +KIMNL GD + GV VL++ DDDAVDPHLERIKN+A
Sbjct: 417 FRNIQRNEYHNLFNFINGKNIKIMNLGGDGQGASGVVTDVLRDTDDDAVDPHLERIKNQA 476
Query: 357 GGDESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSSVKASTS 416
G +ESDEED DFVADKDD GSPTDDSG+E+SDAS+SGGEKEK +KKE+ K
Sbjct: 477 GDEESDEEDEDFVADKDDSGSPTDDSGDEESDASDSGGEKEKSSKKEASSSKPVQK---R 533
Query: 417 KKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLG 476
K K RD DE +KKK KKKKDPNAPKRAM+ F++FS ER N+K SNP + T++ + LG
Sbjct: 534 KHKGRD-DEGQEKKKPKKKKDPNAPKRAMTPFMYFSMAERGNMKSSNPDLPTTEIAKKLG 592
Query: 477 ERWKKMSVEEREPYESKARADKKRYKDEISGYKNPKPMDIDSGNESD 523
E W+KMS EE++PY +A+ DKKRY+ E + Y+ +D+DSGNESD
Sbjct: 593 EMWQKMSGEEKQPYIQQAQVDKKRYEKESAVYRGEATVDVDSGNESD 639
>gi|115462441|ref|NP_001054820.1| Os05g0182600 [Oryza sativa Japonica Group]
gi|75253362|sp|Q65WY8.1|SSP1B_ORYSJ RecName: Full=FACT complex subunit SSRP1-B; AltName:
Full=Facilitates chromatin transcription complex subunit
SSRP1-B; AltName: Full=Recombination signal sequence
recognition protein 1-B
gi|52353744|gb|AAU44310.1| putative HMG-box with DNAbinding protein [Oryza sativa Japonica
Group]
gi|57900696|gb|AAW57821.1| putative HMG-box with DNAbinding protein [Oryza sativa Japonica
Group]
gi|113578371|dbj|BAF16734.1| Os05g0182600 [Oryza sativa Japonica Group]
gi|125551089|gb|EAY96798.1| hypothetical protein OsI_18726 [Oryza sativa Indica Group]
gi|222630432|gb|EEE62564.1| hypothetical protein OsJ_17363 [Oryza sativa Japonica Group]
Length = 640
Score = 700 bits (1807), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/528 (70%), Positives = 444/528 (84%), Gaps = 10/528 (1%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
ML+F VG K+AFEVSLADV+QTQ+QGK DV+LEFHVDDTTG NEKDSLM++SFH+P SNT
Sbjct: 118 MLSFNVGSKEAFEVSLADVAQTQMQGKTDVVLEFHVDDTTGGNEKDSLMDLSFHVPTSNT 177
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
QF GDEN P AQV I++ ADVG+ EEAVVTF+GIAILTPRGRYSVELHLSFLRLQG
Sbjct: 178 QFPGDENRPSAQVLWQAILNKADVGSS-EEAVVTFDGIAILTPRGRYSVELHLSFLRLQG 236
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
QANDFKIQYSS++RLF+LPKSN PHTFVV+TLDPPIRKGQTLYPHIV+QFET+ VVQ +L
Sbjct: 237 QANDFKIQYSSILRLFVLPKSNNPHTFVVITLDPPIRKGQTLYPHIVIQFETEAVVQRDL 296
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
+S+E+L KYKD+LE SY+GLIHEVF+ +LRGLSGAK+T+P FRS QDGYAVKSSLKA
Sbjct: 297 TLSDEVLAEKYKDRLENSYQGLIHEVFSKVLRGLSGAKVTRPSTFRSCQDGYAVKSSLKA 356
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNM--HYFDLLIRLKTEQEHL 298
EDG+LYPLEK FFFLPKPPTLILHEEI+YVEFERH AGG+++ HYFDLL++LK +QEHL
Sbjct: 357 EDGLLYPLEKGFFFLPKPPTLILHEEIEYVEFERHGAGGASISSHYFDLLVKLKNDQEHL 416
Query: 299 FRNIQRNEYHNLFDFISGKGLKIMNLGDMK-TTDGVAAVLQEDDDDAVDPHLERIKNEAG 357
FRNIQRNEYHNLF+FISGK LKI+NLG+ + GV AVLQ DDDAVDPHLERI+N+ G
Sbjct: 417 FRNIQRNEYHNLFNFISGKHLKILNLGEAQGRAGGVTAVLQSTDDDAVDPHLERIRNQTG 476
Query: 358 GDESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSSVKASTSK 417
DESDEED DFVADKDD GSPTDDSGEE SDAS SGGEKEK +KKE+ + +K K
Sbjct: 477 DDESDEEDEDFVADKDDSGSPTDDSGEEGSDASLSGGEKEKSSKKEASSSKAPLK----K 532
Query: 418 KKSRDGD--EDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVL 475
+K + GD E +K+K KKKKDPNAPKRA++ F++FS+ ER N+K SNP +A T++ + L
Sbjct: 533 RKPKGGDAAEGSEKRKPKKKKDPNAPKRAIAPFMYFSKAERANLKNSNPELATTEIAKKL 592
Query: 476 GERWKKMSVEEREPYESKARADKKRYKDEISGYKNPKPMDIDSGNESD 523
GERW+KM+ EE++PY +++ DKKRY +E + Y+ MD+DSG SD
Sbjct: 593 GERWQKMTAEEKQPYVEQSQVDKKRYAEESAAYRGAAAMDVDSGPASD 640
>gi|413944648|gb|AFW77297.1| hypothetical protein ZEAMMB73_043348 [Zea mays]
Length = 644
Score = 689 bits (1777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/514 (69%), Positives = 422/514 (82%), Gaps = 5/514 (0%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
ML F VG K+AFEVSLADV+QTQ+QGK DV+LEFHVDDTTGANEKDSLM++SFH+P SNT
Sbjct: 118 MLCFNVGSKEAFEVSLADVAQTQMQGKTDVVLEFHVDDTTGANEKDSLMDLSFHVPTSNT 177
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
QF+GDE+ AQ+ I D G E AVVTF+GIAILTPRGRYSVELH SFLRLQG
Sbjct: 178 QFIGDEHRTSAQMLWQAISVEIDGGGSSEMAVVTFDGIAILTPRGRYSVELHQSFLRLQG 237
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
QANDFKIQYSS++RLF+LPKS+ PHTFVV+TLDPPIRKGQTLYPHIV+QFET+ VV+ EL
Sbjct: 238 QANDFKIQYSSILRLFVLPKSHNPHTFVVITLDPPIRKGQTLYPHIVIQFETEAVVEREL 297
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
+S E+L KYKD+LE SY+GLIHEVF+ +LRGLS AK+T+P FRS DGYAVKSSLKA
Sbjct: 298 TLSGEILAEKYKDRLESSYRGLIHEVFSKVLRGLSSAKVTRPSTFRSCLDGYAVKSSLKA 357
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNM--HYFDLLIRLKTEQEHL 298
EDG+LYPLEK FFFLPKPPTLI HEEI+YVEFERH AGG+++ HYFDLL++L +QE L
Sbjct: 358 EDGLLYPLEKGFFFLPKPPTLIPHEEIEYVEFERHGAGGASISSHYFDLLVKLTNDQELL 417
Query: 299 FRNIQRNEYHNLFDFISGKGLKIMNLGDMK-TTDGVAAVLQEDDDDAVDPHLERIKNEAG 357
FRNIQRNEYHNLF+FISGK LKI+NLGD + T GV AVLQ DDD+VDPHLERIKN+AG
Sbjct: 418 FRNIQRNEYHNLFNFISGKHLKILNLGDGQGRTSGVTAVLQSTDDDSVDPHLERIKNQAG 477
Query: 358 GDESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPA--KKESKKESSSVKAST 415
+ESDEED DFVADKDD GSPTDDS E SDAS SGGEKE +K SKKE+SS K
Sbjct: 478 NEESDEEDEDFVADKDDSGSPTDDSDAEGSDASMSGGEKEVTNFFQKPSKKEASSSKPPV 537
Query: 416 SKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVL 475
KK+ DE +KKK KKKKDPNAPKRA++ F++FS+ ER NIK SNP +A T++ + L
Sbjct: 538 KKKQKSGPDEGSQKKKPKKKKDPNAPKRAIAPFMYFSKAERANIKSSNPELATTEIAKKL 597
Query: 476 GERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
GERW+KM+ EER+PY +++ DK+RY +E + Y+
Sbjct: 598 GERWQKMTAEERQPYVEQSQVDKQRYAEESAAYR 631
>gi|242087123|ref|XP_002439394.1| hypothetical protein SORBIDRAFT_09g005650 [Sorghum bicolor]
gi|241944679|gb|EES17824.1| hypothetical protein SORBIDRAFT_09g005650 [Sorghum bicolor]
Length = 644
Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/514 (69%), Positives = 426/514 (82%), Gaps = 5/514 (0%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
ML F VG K+AFEVSLADV+QTQ+QGK DV+LEFHVDDTTGANEKDSLM++SFH+P SNT
Sbjct: 118 MLCFNVGSKEAFEVSLADVAQTQMQGKTDVVLEFHVDDTTGANEKDSLMDLSFHVPTSNT 177
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
QFVGDE+ AQ+ I D G E AVVTF+GIAILTPRGRYSVELH SFLRLQG
Sbjct: 178 QFVGDEHRTSAQMLWQAISVEIDGGGSSEMAVVTFDGIAILTPRGRYSVELHQSFLRLQG 237
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
QANDFKIQYSS++RLF+LPKS+ PHTFVV+TLDPPIRKGQTLYPHIV+QFET+ VV+ EL
Sbjct: 238 QANDFKIQYSSILRLFVLPKSHNPHTFVVITLDPPIRKGQTLYPHIVIQFETEAVVEREL 297
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
+S E+L KYKD+LE SY+GLIHEVF+ +LRGLSGAK+T+P FRS QDGYAVKSSLKA
Sbjct: 298 ALSGEVLAEKYKDRLESSYRGLIHEVFSKVLRGLSGAKVTRPSTFRSCQDGYAVKSSLKA 357
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNM--HYFDLLIRLKTEQEHL 298
EDG+LYPLEK FFFLPKPPTLI H+EI+YVEFERH AGG+++ HYFDLL++L +QEHL
Sbjct: 358 EDGLLYPLEKGFFFLPKPPTLIPHDEIEYVEFERHGAGGASISSHYFDLLVKLTNDQEHL 417
Query: 299 FRNIQRNEYHNLFDFISGKGLKIMNLGDMK-TTDGVAAVLQEDDDDAVDPHLERIKNEAG 357
FRNIQRNEYHNLF+FISGK LKI+NLGD + T GV AVLQ DDD+VDPHLERIKN+AG
Sbjct: 418 FRNIQRNEYHNLFNFISGKHLKILNLGDGQGRTSGVTAVLQSTDDDSVDPHLERIKNQAG 477
Query: 358 GDESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSSVKASTS- 416
DESDEED DFVADKDD GSPTDDS + SDAS SGG+KEKP+KKE+ + +
Sbjct: 478 NDESDEEDEDFVADKDDSGSPTDDSDADGSDASMSGGDKEKPSKKEASSSKEASSSKPPV 537
Query: 417 KKKSRDG-DEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVL 475
KKK + G DE +KK+ KKKKDPNAPKRA++ F++FS+ ER NIK SNP +A T++ + L
Sbjct: 538 KKKQKSGPDEGSQKKRPKKKKDPNAPKRAIAPFMYFSKAERANIKSSNPELATTEIAKKL 597
Query: 476 GERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
GERW+KM+ EER+PY +++ DK+RY +E + Y+
Sbjct: 598 GERWQKMTAEERQPYVEQSQVDKQRYAEESAAYR 631
>gi|326523557|dbj|BAJ92949.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 643
Score = 670 bits (1728), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/529 (68%), Positives = 432/529 (81%), Gaps = 12/529 (2%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
ML+F VG K+AFEVSL+DVSQTQLQGK DV+LEFHVDDTTGANEKDSLM++SFH+P SNT
Sbjct: 118 MLSFNVGSKEAFEVSLSDVSQTQLQGKTDVVLEFHVDDTTGANEKDSLMDLSFHVPTSNT 177
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
QF+GDE P A +F KI+++ADVG+ EEAVV+ EGIAILTPRGRY+VELH+SFLRLQG
Sbjct: 178 QFLGDEERPSAHIFWQKILTIADVGSS-EEAVVSLEGIAILTPRGRYTVELHMSFLRLQG 236
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
QANDFKIQYSS++RLF+LPKSN PHTFVV+TLDPPIRKGQTLYPHIV+QF T+ VV+ EL
Sbjct: 237 QANDFKIQYSSILRLFVLPKSNNPHTFVVITLDPPIRKGQTLYPHIVIQFVTENVVEKEL 296
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
+SEE+L KYKD+L+ SY GL HEVF+ ILRGLSGAK+T+P FRS QDGYAVKSSLKA
Sbjct: 297 SLSEEVLAEKYKDRLQSSYNGLEHEVFSKILRGLSGAKVTRPSTFRSCQDGYAVKSSLKA 356
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNM--HYFDLLIRLKTEQEHL 298
EDG+LYPLEK FFFLPKPPTLILHEEI+YVEFERH AGG++M HYFDLL++LK +QEHL
Sbjct: 357 EDGLLYPLEKGFFFLPKPPTLILHEEIEYVEFERHGAGGASMSSHYFDLLVKLKNDQEHL 416
Query: 299 FRNIQRNEYHNLFDFISGKGLKIMNLGD--MKTTDGVAAVLQEDDDDAVDPHLERIKNEA 356
FRNIQRNEYHNLF+F+SGK LKI+NLG+ T VAA LQ DDD VDPHLERIKN+A
Sbjct: 417 FRNIQRNEYHNLFNFVSGKNLKILNLGEDGQDRTGAVAAALQSTDDDPVDPHLERIKNQA 476
Query: 357 GGDESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSSVKASTS 416
G +ESDEED DFVADKDD GS D EE SDAS S GEKEK +KKE+ VK
Sbjct: 477 GDEESDEEDEDFVADKDDSGS-PSDDSEEGSDASISDGEKEKSSKKEASSSKPPVK---R 532
Query: 417 KKKSRDGDE-DGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVL 475
K KS D + + +K K+KK KDPNAPKRA++ F++FS+ ER N+K NP ++ TD+ + L
Sbjct: 533 KPKSVDVESSEKRKPKKKKTKDPNAPKRAIAPFMYFSKAERANLKNINPELSTTDIAKKL 592
Query: 476 GERWKKMSVEEREPYESKARADKKRYKDEISGYK--NPKPMDIDSGNES 522
GE+W+KMS EE++PY +++ DKKRY +E + Y+ P+D+DS + S
Sbjct: 593 GEKWQKMSAEEKQPYLEQSQVDKKRYAEETAAYRGAGAAPVDVDSADGS 641
>gi|168047021|ref|XP_001775970.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672628|gb|EDQ59162.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 635
Score = 667 bits (1720), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/524 (65%), Positives = 427/524 (81%), Gaps = 19/524 (3%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQ 61
L F VG K AF+VS+ADVSQTQ+QGKN+V+LEFHVDDTTGA+EKD+LME+SFHIP +NT
Sbjct: 115 LAFSVGGKHAFDVSIADVSQTQMQGKNEVMLEFHVDDTTGASEKDTLMELSFHIPTTNTT 174
Query: 62 FVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQ 121
++GDE PPAQ+FR+KI+SM DVG G EA+ FE + ILTPRGRY+VELH SFLRLQGQ
Sbjct: 175 YIGDEERPPAQIFREKILSMGDVGPSGAEAIALFEEVHILTPRGRYNVELHASFLRLQGQ 234
Query: 122 ANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELL 181
ANDFKIQYSSVVRLF+LPKSNQPHTFVV+TLDPPIRKGQT YPHIVLQF ++ + + L
Sbjct: 235 ANDFKIQYSSVVRLFILPKSNQPHTFVVITLDPPIRKGQTFYPHIVLQFPSEEIAECTLS 294
Query: 182 MSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAE 241
+ EELLNTKYKD+L+P+YK L H+VFT IL+GLSGAK+T+PGKFRSAQDGY V++SLKAE
Sbjct: 295 IGEELLNTKYKDRLQPAYKDLSHDVFTQILKGLSGAKVTRPGKFRSAQDGYCVRTSLKAE 354
Query: 242 DGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGS---NMHYFDLLIRLKTEQEHL 298
+G LYPLEKSFFFLPKPPTLILH+EI+Y+EFERH A G+ + HYFDLLIRLK+EQEH
Sbjct: 355 EGTLYPLEKSFFFLPKPPTLILHDEIEYLEFERHGAAGTSSISSHYFDLLIRLKSEQEHQ 414
Query: 299 FRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKN--EA 356
FRNIQRNEYHNLF+FISGK LKIMNLGD + T GVAA L+ DD+ VDPHL RI++ E+
Sbjct: 415 FRNIQRNEYHNLFNFISGKNLKIMNLGDAQGTSGVAAALEGSDDEGVDPHLNRIRSARES 474
Query: 357 GG-----DESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSSV 411
GG ++SDEED DFVA+KDD GSPTD+S E+ D S+ GG E+P KK K+E +
Sbjct: 475 GGAGLGDEDSDEEDEDFVAEKDDAGSPTDESDGEEPDGSDDGG--ERPKKKREKREDVAP 532
Query: 412 KASTSKKKSR---DGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPG--- 465
K++ K+K + DG++ GKKK++KK+KDPNAPKRA+S F+ F Q+E K++PG
Sbjct: 533 KSAPKKRKKKDEADGEDGGKKKRKKKEKDPNAPKRALSAFMRF-QLEERKKMKADPGQAS 591
Query: 466 IAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
++F + G+ LGE+W+ MS ++ PYE+ A+ D++RYK ++GYK
Sbjct: 592 MSFGEFGKSLGEKWRNMSASDKAPYEADAKVDQERYKKAMAGYK 635
>gi|357134382|ref|XP_003568796.1| PREDICTED: FACT complex subunit SSRP1-B-like isoform 1
[Brachypodium distachyon]
Length = 643
Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/527 (67%), Positives = 427/527 (81%), Gaps = 16/527 (3%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
ML+F VG K+AFEVSLADVSQTQ+QGK DV+LEFHVDDTTGANEKDSLM+ISFHIP +NT
Sbjct: 118 MLSFNVGSKEAFEVSLADVSQTQMQGKTDVVLEFHVDDTTGANEKDSLMDISFHIPTTNT 177
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
QF GDE+ P A +F KI+++ADVG+ EEAVVTFEGIAILTPRGRYSVELH+SFLRLQG
Sbjct: 178 QFPGDEDRPSAHIFWQKILAIADVGSS-EEAVVTFEGIAILTPRGRYSVELHMSFLRLQG 236
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
QANDFKIQYSS++RLF+LPKSN PHTFVV+TLDPPIRKGQTLYPHIV+QF+T+ V + +L
Sbjct: 237 QANDFKIQYSSILRLFVLPKSNNPHTFVVITLDPPIRKGQTLYPHIVIQFQTEVVAEMDL 296
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
+SEE+L KYKD+L+ SY GL HEVF+ ILRGLSGAK+T+P FRS QDGYAVKSSLKA
Sbjct: 297 KLSEEVLAEKYKDRLQGSYNGLEHEVFSKILRGLSGAKVTRPSTFRSCQDGYAVKSSLKA 356
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNM--HYFDLLIRLKTEQEHL 298
EDG+LYPLEK FFFLPKPPTLILHEEI+YVEFERH AGG++M HYFDLL++LK +QEHL
Sbjct: 357 EDGLLYPLEKGFFFLPKPPTLILHEEIEYVEFERHGAGGASMSSHYFDLLVKLKNDQEHL 416
Query: 299 FRNIQRNEYHNLFDFISGKGLKIMNLGD--MKTTDGVAAVLQEDDDDAVDPHLERIKNEA 356
FRNIQRNEYHNLFDF+SGK LKIMNLG+ T VAA L DD DPHLERIKN+A
Sbjct: 417 FRNIQRNEYHNLFDFVSGKNLKIMNLGEDGQGRTGAVAAALDSTDDSLHDPHLERIKNQA 476
Query: 357 GGDESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSSVKASTS 416
G +ESDEED DFVADKDD D +E SDAS SGGE EK +KKE+ V
Sbjct: 477 GDEESDEEDEDFVADKDD-SGSPSDDSDEGSDASLSGGESEKSSKKEASSSKPPV----- 530
Query: 417 KKKSRDGDEDGKK--KKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRV 474
K+K + GD +G + K +KKKKDPNAPKRA++ F++FS+ ER N+K SNP + TD+ +
Sbjct: 531 KRKPKSGDTEGSEKRKPKKKKKDPNAPKRALAPFMYFSKAERANLKSSNPVLGTTDIAKK 590
Query: 475 LGERWKKMSVEEREPYESKARADKKRYKDEISGYKN---PKPMDIDS 518
LGE+W+KMS EE++PY + DKKRY++E + Y++ P+D++S
Sbjct: 591 LGEKWQKMSAEEKQPYVEQHLVDKKRYQEETAAYRDNAGAAPVDVES 637
>gi|357134384|ref|XP_003568797.1| PREDICTED: FACT complex subunit SSRP1-B-like isoform 2
[Brachypodium distachyon]
Length = 655
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/527 (67%), Positives = 427/527 (81%), Gaps = 16/527 (3%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
ML+F VG K+AFEVSLADVSQTQ+QGK DV+LEFHVDDTTGANEKDSLM+ISFHIP +NT
Sbjct: 130 MLSFNVGSKEAFEVSLADVSQTQMQGKTDVVLEFHVDDTTGANEKDSLMDISFHIPTTNT 189
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
QF GDE+ P A +F KI+++ADVG+ EEAVVTFEGIAILTPRGRYSVELH+SFLRLQG
Sbjct: 190 QFPGDEDRPSAHIFWQKILAIADVGSS-EEAVVTFEGIAILTPRGRYSVELHMSFLRLQG 248
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
QANDFKIQYSS++RLF+LPKSN PHTFVV+TLDPPIRKGQTLYPHIV+QF+T+ V + +L
Sbjct: 249 QANDFKIQYSSILRLFVLPKSNNPHTFVVITLDPPIRKGQTLYPHIVIQFQTEVVAEMDL 308
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
+SEE+L KYKD+L+ SY GL HEVF+ ILRGLSGAK+T+P FRS QDGYAVKSSLKA
Sbjct: 309 KLSEEVLAEKYKDRLQGSYNGLEHEVFSKILRGLSGAKVTRPSTFRSCQDGYAVKSSLKA 368
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNM--HYFDLLIRLKTEQEHL 298
EDG+LYPLEK FFFLPKPPTLILHEEI+YVEFERH AGG++M HYFDLL++LK +QEHL
Sbjct: 369 EDGLLYPLEKGFFFLPKPPTLILHEEIEYVEFERHGAGGASMSSHYFDLLVKLKNDQEHL 428
Query: 299 FRNIQRNEYHNLFDFISGKGLKIMNLGD--MKTTDGVAAVLQEDDDDAVDPHLERIKNEA 356
FRNIQRNEYHNLFDF+SGK LKIMNLG+ T VAA L DD DPHLERIKN+A
Sbjct: 429 FRNIQRNEYHNLFDFVSGKNLKIMNLGEDGQGRTGAVAAALDSTDDSLHDPHLERIKNQA 488
Query: 357 GGDESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSSVKASTS 416
G +ESDEED DFVADKDD D +E SDAS SGGE EK +KKE+ V
Sbjct: 489 GDEESDEEDEDFVADKDD-SGSPSDDSDEGSDASLSGGESEKSSKKEASSSKPPV----- 542
Query: 417 KKKSRDGDEDGKK--KKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRV 474
K+K + GD +G + K +KKKKDPNAPKRA++ F++FS+ ER N+K SNP + TD+ +
Sbjct: 543 KRKPKSGDTEGSEKRKPKKKKKDPNAPKRALAPFMYFSKAERANLKSSNPVLGTTDIAKK 602
Query: 475 LGERWKKMSVEEREPYESKARADKKRYKDEISGYKN---PKPMDIDS 518
LGE+W+KMS EE++PY + DKKRY++E + Y++ P+D++S
Sbjct: 603 LGEKWQKMSAEEKQPYVEQHLVDKKRYQEETAAYRDNAGAAPVDVES 649
>gi|357125689|ref|XP_003564523.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex subunit SSRP1-A-like
[Brachypodium distachyon]
Length = 637
Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/511 (65%), Positives = 410/511 (80%), Gaps = 10/511 (1%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQ 61
LTFMVG KQAFEVSL DV+QTQ+QGK DV+LEFHVDDTTGANEKDSLME+SFH+P SNTQ
Sbjct: 118 LTFMVGSKQAFEVSLPDVAQTQMQGKTDVLLEFHVDDTTGANEKDSLMELSFHVPMSNTQ 177
Query: 62 FVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQ 121
FVGDEN AQ+ + I+ D G+ E AV TFEGIAILTPRGRY+VELHLS+LRLQ Q
Sbjct: 178 FVGDENRSSAQILWETILGEVDAGSS-EAAVSTFEGIAILTPRGRYNVELHLSYLRLQAQ 236
Query: 122 ANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELL 181
ANDFKIQY+S+VRLF+LPKSN PHT VVVTLDPPIRKGQTLYPHIV+QFET+ VV+ +
Sbjct: 237 ANDFKIQYTSIVRLFILPKSNNPHTMVVVTLDPPIRKGQTLYPHIVIQFETETVVEINVK 296
Query: 182 MSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAE 241
+S ELL KYKD+LE SY+GLIHEVF +LRGLS AK+T+PG FRS+QDGYAV+SSLKAE
Sbjct: 297 LSTELLAEKYKDRLEESYQGLIHEVFIKVLRGLSAAKVTRPGSFRSSQDGYAVQSSLKAE 356
Query: 242 DGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNM--HYFDLLIRLKTEQEHLF 299
DG+LYPLEK FFFLPKPPTLIL EEI++VEF+R A G+ M H FDLL++LK +QEHLF
Sbjct: 357 DGLLYPLEKGFFFLPKPPTLILDEEIEFVEFQRLGARGAGMSSHNFDLLVKLKNDQEHLF 416
Query: 300 RNIQRNEYHNLFDFISGKGLKIMNLGDMK-TTDGVAAVLQEDDDDAVDPHLERIKNEAGG 358
RNI+R+E NL +FI+GK LK+MNLGD + T+ GV V+ + DD VDPHLERIKN+AG
Sbjct: 417 RNIRRSECQNLSNFINGKHLKMMNLGDGQGTSGGVTDVIHDSGDDTVDPHLERIKNQAGD 476
Query: 359 DESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSSVKASTSKK 418
+ESDEED DFV DKDDGGSPTDDSG ++SDASESG E K++S + +S +K+
Sbjct: 477 EESDEEDEDFVLDKDDGGSPTDDSGGDESDASESGDE-----KEKSSGKKASSSKPPAKR 531
Query: 419 KSRDGD-EDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGE 477
K + G+ ED +K+K+K KKDPNAPKRAM+ F+ FS ER +K SNP + ++ + LG
Sbjct: 532 KPKGGEGEDSEKRKRKSKKDPNAPKRAMTPFLCFSISERAAVKGSNPDLHSNEITKKLGL 591
Query: 478 RWKKMSVEEREPYESKARADKKRYKDEISGY 508
W+KMS +E++PY ++ DKKRY++E + Y
Sbjct: 592 MWQKMSTQEKQPYIQQSLVDKKRYEEESAAY 622
>gi|302814252|ref|XP_002988810.1| hypothetical protein SELMODRAFT_159743 [Selaginella moellendorffii]
gi|300143381|gb|EFJ10072.1| hypothetical protein SELMODRAFT_159743 [Selaginella moellendorffii]
Length = 647
Score = 636 bits (1640), Expect = e-180, Method: Compositional matrix adjust.
Identities = 341/517 (65%), Positives = 416/517 (80%), Gaps = 14/517 (2%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQ 61
L+F+VG K AFE+ +AD+S TQ+QGKNDV +EFHVDDT ANEKD+LME+SFH+P++NT
Sbjct: 119 LSFVVGGKPAFEICVADISNTQVQGKNDVQMEFHVDDT--ANEKDTLMEMSFHVPSTNTT 176
Query: 62 FVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQ 121
FVGDE AQVF DKI+SMADVG G EAV FE + +LTPRGRY VELHLSFLRL G
Sbjct: 177 FVGDEERVSAQVFCDKILSMADVGPAGGEAVAAFETVNVLTPRGRYLVELHLSFLRLFG- 235
Query: 122 ANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELL 181
A+DFKIQY+SV RLF+LP+S Q T+VV+TLDPPIRKGQT YPHIV Q+ ++ + + L
Sbjct: 236 ASDFKIQYTSVARLFVLPRSAQSSTYVVITLDPPIRKGQTFYPHIVFQYPSEEITELTPL 295
Query: 182 MSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPG-KFRSAQDGYAVKSSLKA 240
+S+ELLNTKYKD+L P YKGL +EVF ILRGLSGA ITKPG KFRS+Q+GYAV+++LKA
Sbjct: 296 ISDELLNTKYKDRLAPQYKGLSYEVFVEILRGLSGAGITKPGTKFRSSQEGYAVRAALKA 355
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERH-AAGGSNMHY--FDLLIRLKTEQEH 297
E+G+LYPLEKSFFFLPKPPTLI++EEIDYVEFERH AAG S+M FDL++RLKT+QEH
Sbjct: 356 EEGLLYPLEKSFFFLPKPPTLIVYEEIDYVEFERHGAAGTSSMSSKNFDLILRLKTDQEH 415
Query: 298 LFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIK---N 354
LFRNI RNEYH+LF FIS KGLKI+N + + VA LQ DD+ VDPHLERI+
Sbjct: 416 LFRNISRNEYHSLFKFISEKGLKILNF-QTQGSSAVAEALQGSDDEGVDPHLERIRIARA 474
Query: 355 EAGGDESDEEDSDFVADKDDGGSPTDDSGEEDS-DASESGGEK--EKPAKKESKKESSSV 411
+SDEED DFVADKDD GSPTDDSGEE+ DAS+SGGE+ E+P KK+ KK +S
Sbjct: 475 TGDEGDSDEEDEDFVADKDDEGSPTDDSGEEEEPDASDSGGEQQDERPVKKDKKKVEASQ 534
Query: 412 KASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDV 471
K + SKKK +D + DG KKK+++KKDPNAPKRA+SGF++FS EREN+KKS PGI+F DV
Sbjct: 535 KPAASKKKKKDEEGDGDKKKKRRKKDPNAPKRALSGFMYFSLAERENLKKSTPGISFKDV 594
Query: 472 GRVLGERWKKMSVEEREPYESKARADKKRYKDEISGY 508
+ LGERWK MS +E+EP+ES+AR DK+RY ++ GY
Sbjct: 595 AKTLGERWKAMSKDEKEPFESQARVDKERYTKQMQGY 631
>gi|302762326|ref|XP_002964585.1| hypothetical protein SELMODRAFT_166865 [Selaginella moellendorffii]
gi|300168314|gb|EFJ34918.1| hypothetical protein SELMODRAFT_166865 [Selaginella moellendorffii]
Length = 647
Score = 635 bits (1639), Expect = e-179, Method: Compositional matrix adjust.
Identities = 340/517 (65%), Positives = 416/517 (80%), Gaps = 14/517 (2%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQ 61
L+F+VG K AFE+ +AD+S TQ+QGKNDV +EFHVDDT ANEKD+LME+SFH+P++NT
Sbjct: 119 LSFVVGGKPAFEICVADISNTQVQGKNDVQMEFHVDDT--ANEKDTLMEMSFHVPSTNTT 176
Query: 62 FVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQ 121
FVGDE AQVF DKI+SMADVG G EAV FE + +LTPRGRY VELHLSFLRL G
Sbjct: 177 FVGDEERASAQVFCDKILSMADVGPAGGEAVAAFETVNVLTPRGRYLVELHLSFLRLFG- 235
Query: 122 ANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELL 181
A+DFKIQY+SV RLF+LP+S Q T+VV+TLDPPIRKGQT YPHIV Q+ ++ + + L
Sbjct: 236 ASDFKIQYTSVARLFVLPRSAQSSTYVVITLDPPIRKGQTFYPHIVFQYPSEEITELTPL 295
Query: 182 MSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPG-KFRSAQDGYAVKSSLKA 240
+S+ELLNTKYKD+L P YKGL +EVF ILRGLSGA ITKPG KFRS+Q+GYAV+++LKA
Sbjct: 296 ISDELLNTKYKDRLAPQYKGLSYEVFVEILRGLSGAGITKPGTKFRSSQEGYAVRAALKA 355
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERH-AAGGSNMHY--FDLLIRLKTEQEH 297
E+G+LYPLEKSFFFLPKPPTLI++EEIDYVEFERH AAG S+M FDL++RLKT+QEH
Sbjct: 356 EEGLLYPLEKSFFFLPKPPTLIVYEEIDYVEFERHGAAGTSSMSSKNFDLILRLKTDQEH 415
Query: 298 LFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIK---N 354
LFRNI RNEYH+LF FIS KGLKI+N + + VA LQ DD+ VDPHLERI+
Sbjct: 416 LFRNISRNEYHSLFKFISEKGLKILNF-QTQGSSAVAEALQGSDDEGVDPHLERIRIARA 474
Query: 355 EAGGDESDEEDSDFVADKDDGGSPTDDSGEEDS-DASESGGEK--EKPAKKESKKESSSV 411
+SDEED DFVADKDD GSPTDDSGEE+ DAS+SGGE+ E+P KK+ KK +S
Sbjct: 475 TGDEGDSDEEDEDFVADKDDEGSPTDDSGEEEEPDASDSGGEQQDERPVKKDKKKVEASQ 534
Query: 412 KASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDV 471
K + +KKK +D + DG KKK+++KKDPNAPKRA+SGF++FS EREN+KKS PGI+F DV
Sbjct: 535 KPAATKKKKKDEEGDGDKKKKRRKKDPNAPKRALSGFMYFSLAERENLKKSTPGISFKDV 594
Query: 472 GRVLGERWKKMSVEEREPYESKARADKKRYKDEISGY 508
+ LGERWK MS +E+EP+ES+AR DK+RY ++ GY
Sbjct: 595 AKTLGERWKAMSKDEKEPFESQARVDKERYTKQMQGY 631
>gi|413944647|gb|AFW77296.1| hypothetical protein ZEAMMB73_043348 [Zea mays]
Length = 605
Score = 616 bits (1589), Expect = e-174, Method: Compositional matrix adjust.
Identities = 334/512 (65%), Positives = 394/512 (76%), Gaps = 40/512 (7%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
ML F VG K+AFEVSLADV+QTQ+QGK DV+LEFHVDDTTGANEKDSLM++SFH+P SNT
Sbjct: 118 MLCFNVGSKEAFEVSLADVAQTQMQGKTDVVLEFHVDDTTGANEKDSLMDLSFHVPTSNT 177
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
QF+GDE+ AQ +I D G E AVVTF+GIAILTPRGRYSVELH SFLRLQG
Sbjct: 178 QFIGDEHRTSAQAISVEI----DGGGSSEMAVVTFDGIAILTPRGRYSVELHQSFLRLQG 233
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
QANDFKIQYSS++RLF+LPK FET+ VV+ EL
Sbjct: 234 QANDFKIQYSSILRLFVLPK-----------------------------FETEAVVEREL 264
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
+S E+L KYKD+LE SY+GLIHEVF+ +LRGLS AK+T+P FRS DGYAVKSSLKA
Sbjct: 265 TLSGEILAEKYKDRLESSYRGLIHEVFSKVLRGLSSAKVTRPSTFRSCLDGYAVKSSLKA 324
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNM--HYFDLLIRLKTEQEHL 298
EDG+LYPLEK FFFLPKPPTLI HEEI+YVEFERH AGG+++ HYFDLL++L +QE L
Sbjct: 325 EDGLLYPLEKGFFFLPKPPTLIPHEEIEYVEFERHGAGGASISSHYFDLLVKLTNDQELL 384
Query: 299 FRNIQRNEYHNLFDFISGKGLKIMNLGDMK-TTDGVAAVLQEDDDDAVDPHLERIKNEAG 357
FRNIQRNEYHNLF+FISGK LKI+NLGD + T GV AVLQ DDD+VDPHLERIKN+AG
Sbjct: 385 FRNIQRNEYHNLFNFISGKHLKILNLGDGQGRTSGVTAVLQSTDDDSVDPHLERIKNQAG 444
Query: 358 GDESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSSVKASTSK 417
+ESDEED DFVADKDD GSPTDDS E SDAS SGGEKEKP SKKE+SS K K
Sbjct: 445 NEESDEEDEDFVADKDDSGSPTDDSDAEGSDASMSGGEKEKP----SKKEASSSKPPVKK 500
Query: 418 KKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGE 477
K+ DE +KKK KKKKDPNAPKRA++ F++FS+ ER NIK SNP +A T++ + LGE
Sbjct: 501 KQKSGPDEGSQKKKPKKKKDPNAPKRAIAPFMYFSKAERANIKSSNPELATTEIAKKLGE 560
Query: 478 RWKKMSVEEREPYESKARADKKRYKDEISGYK 509
RW+KM+ EER+PY +++ DK+RY +E + Y+
Sbjct: 561 RWQKMTAEERQPYVEQSQVDKQRYAEESAAYR 592
>gi|449509245|ref|XP_004163534.1| PREDICTED: FACT complex subunit SSRP1-like, partial [Cucumis
sativus]
Length = 303
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 266/304 (87%), Positives = 287/304 (94%), Gaps = 2/304 (0%)
Query: 223 GKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNM 282
GKFRS QDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNM
Sbjct: 1 GKFRSCQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNM 60
Query: 283 HYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDD 342
HYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGD + DGVAAVLQEDDD
Sbjct: 61 HYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDAQARDGVAAVLQEDDD 120
Query: 343 DAVDPHLERIKNEAGGDESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKK 402
DAVDPHLERI+NEAGGDESDEEDSDFVADKDDGGSPTDDSG +DSD S SGGEKEKP KK
Sbjct: 121 DAVDPHLERIRNEAGGDESDEEDSDFVADKDDGGSPTDDSGGDDSDGSASGGEKEKPGKK 180
Query: 403 ESKKESSSVKASTSKKKSRDGDEDG-KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKK 461
E+KK+ S+ KA +KKKSR+G +DG KKKKQKKKKDPNAPKRA+SGF+FFS+MERENIKK
Sbjct: 181 EAKKDPSASKA-PAKKKSREGADDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKK 239
Query: 462 SNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYKNPKPMDIDSGNE 521
SNPGI+FT++GRVLG++W KMS EE+EPYESKAR DKKRYK+EISGYKNP+PM+IDSGNE
Sbjct: 240 SNPGISFTELGRVLGDKWNKMSAEEKEPYESKARDDKKRYKEEISGYKNPQPMNIDSGNE 299
Query: 522 SDSA 525
SDSA
Sbjct: 300 SDSA 303
>gi|449518545|ref|XP_004166302.1| PREDICTED: FACT complex subunit SSRP1-like, partial [Cucumis
sativus]
Length = 327
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/210 (92%), Positives = 202/210 (96%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
MLTF+VG KQAFEVSLADV+QTQLQGKNDV+LEFHVDDTTGANEKDSLMEISFHIPN+NT
Sbjct: 118 MLTFLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNT 177
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
QFVGDE+ PPAQVFRDKIMSMADV AG EEAVVTFEGIAILTPRGRYSVELHLSFLRLQG
Sbjct: 178 QFVGDESRPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 237
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQS L
Sbjct: 238 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTL 297
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTI 210
+ +EL NTKYKDKLEPSYKGLIHEVFTTI
Sbjct: 298 QIGDELFNTKYKDKLEPSYKGLIHEVFTTI 327
>gi|384247648|gb|EIE21134.1| SSrecog-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 659
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 233/517 (45%), Positives = 325/517 (62%), Gaps = 16/517 (3%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQ 61
L F VG K AF + L DV Q QL G+ +V LEF VDDT G + +D+L ++ F++P T
Sbjct: 121 LVFRVGNKPAFRIPLRDVGQVQL-GREEVTLEFPVDDTAGGDNEDALTDMVFYVPREATG 179
Query: 62 FVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQ 121
FV D A+V D+++ D G E+AVVTF+ +A+L PRGR+ VEL+ SF++L GQ
Sbjct: 180 FVEDGEDQAAKVMYDQVLEHTDAGVATEDAVVTFDSLAVLIPRGRFDVELYPSFMKLLGQ 239
Query: 122 ANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELL 181
A DF+IQY S++RLF+LPK+N PHT VVV+LDPPIRKGQT Y HI++QF +D Q EL
Sbjct: 240 AQDFRIQYDSILRLFVLPKTNTPHTLVVVSLDPPIRKGQTHYYHILVQFPSDEERQIELE 299
Query: 182 MSEELL---NTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQD-GYAVKSS 237
+S+E L N K KL+ + +G ++VF LRGLSG K+TKPG FR+A + G+AV+ S
Sbjct: 300 LSDEALAAKNEKCGGKLQKTLEGPAYDVFAKALRGLSGCKLTKPGTFRTADEAGFAVRCS 359
Query: 238 LKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAG--GSNMHYFDLLIRLKTEQ 295
KA+DG LYPLE++FF++ KPPTL++H+EI+ +EF R G ++ FDL IR+KT+
Sbjct: 360 YKADDGYLYPLERAFFYIHKPPTLLVHDEIESIEFMRQGGGVLAASAKTFDLNIRMKTDN 419
Query: 296 --EHLFRNIQRNEYHNLFDFISGKGLKIMNL--GDMKTTDGVAAVLQEDDDDAVDPHLER 351
E+LFR IQ++E+ NLF FI K L+I NL ++ G A+ D D +D L +
Sbjct: 420 KPEYLFRGIQKSEWQNLFSFIQAKRLRIENLREAELGPAGGGTAL---DLGDDIDTGLAQ 476
Query: 352 IKNEAGGDESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSSV 411
++ D+ EED+DF A D G DD D E + K ++ K +
Sbjct: 477 MEAHGDLDDDSEEDADFDAGADSGAGEDDDDSGMSDDEDEE--TETKKKVAKAPKAKAEP 534
Query: 412 KASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDV 471
K KK + KK+K KKDPNAPK+A+S F+FFS +R+ +KK NP I+F +V
Sbjct: 535 KPKAEPKKRKPAPAKKDDKKKKAKKDPNAPKKALSAFMFFSSAKRDEVKKENPDISFGEV 594
Query: 472 GRVLGERWKKMSVEEREPYESKARADKKRYKDEISGY 508
G+ LG++WK +S E+ Y+ A+ DK RY Y
Sbjct: 595 GKALGDKWKNISATEKAKYDEMAKKDKVRYAKAKEAY 631
>gi|303289076|ref|XP_003063826.1| histone chaperone [Micromonas pusilla CCMP1545]
gi|226454894|gb|EEH52199.1| histone chaperone [Micromonas pusilla CCMP1545]
Length = 657
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 208/525 (39%), Positives = 315/525 (60%), Gaps = 24/525 (4%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQ 61
LTF V K +FEV+ D++ L K++V++EFH+DDT KD+L+E+SF++P ++++
Sbjct: 120 LTFTVDGKTSFEVNAKDIASVNLATKHEVVMEFHMDDTVHQASKDALVEMSFYVPPTSSK 179
Query: 62 F-----VGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFL 116
+ + D A+ DK++++ADV EA+ FEG++++ PRG+ +E+H + +
Sbjct: 180 WGVDQSIEDNEDTGAKNLMDKLLTVADVDDDAGEAIAEFEGVSLVAPRGKVDIEVHATHV 239
Query: 117 RLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVV 176
RL G A DFKIQYS+V R+FLLPK N TF ++ LDPPIRKGQT YPHIV F + +
Sbjct: 240 RLLGSAADFKIQYSAVQRVFLLPKPNGHQTFGIIHLDPPIRKGQTFYPHIVATFNANEEL 299
Query: 177 QSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKS 236
+ E ++EE K+ +KLE Y G EVF +L+ ++G K+T+ G F S G AVK+
Sbjct: 300 EIEPALTEE-QRGKF-EKLEEKYDGPSGEVFVRLLKAVAGCKLTRQGTFASPGGGSAVKA 357
Query: 237 SLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGS--NMHYFDLLIRLKTE 294
S KAE G+L+P+EKSFF+LPKPP L+ + ++D +EFERH+ G+ FD+L+ +KT
Sbjct: 358 SNKAEVGLLFPMEKSFFYLPKPPLLLHYADVDSIEFERHSGAGAVGAQRTFDILVSMKTA 417
Query: 295 ---QEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLER 351
+H F I + E+ NL +F++ K LKI+N+ D + DD++ D H R
Sbjct: 418 AGGAQHQFHGIPKQEFQNLVNFLTAKQLKIVNVDAQARVDQII-----DDEEEEDHHAAR 472
Query: 352 IKNEAGGDESDEEDSDFVADKD-DGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSS 410
++ AGG++S D DF A D DGG PTD E SD + KK+ +
Sbjct: 473 LR--AGGEDSG-TDEDFAAGSDSDGGEPTD---ESGSDDDDDSDGGGDSDSDAPKKKKAK 526
Query: 411 VKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTD 470
+ K + G G KK +K KKDPNAPKR +S ++ F+ R + + PG++ +
Sbjct: 527 KSPAKKAKAAAKGKGKGGKKGKKAKKDPNAPKRPLSSYMIFAGENRGKLVEETPGMSIGE 586
Query: 471 VGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYKNPKPMD 515
+G+ LG +WK+M+ EE+ PYE KA+ K Y ++ Y+ K D
Sbjct: 587 IGKALGAKWKEMTAEEKVPYEDKAKEAKAAYAVKLKEYEATKAAD 631
>gi|145356938|ref|XP_001422680.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582923|gb|ABP00997.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 622
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 200/516 (38%), Positives = 294/516 (56%), Gaps = 56/516 (10%)
Query: 3 TFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQF 62
F VG K AFE+ +S+ + GK+DV+L+FH DDT A EKDSL+E+SF++P + +
Sbjct: 123 VFEVGGKTAFEIDGQYISEATVVGKSDVVLQFHHDDT--AAEKDSLVEMSFYVPPGSETW 180
Query: 63 VGDENHPP----AQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRL 118
GD+ P A+ IMS+A A E V F+G++++ PRG+ S+ELH + +R+
Sbjct: 181 KGDDMEDPDDTAAKRLHAAIMSIAAADAEAGEPVAEFDGVSMVVPRGKVSIELHNTHMRM 240
Query: 119 QGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQS 178
Q DFK+QYSS+VR++LLPK + + V+ LDPPIRKGQT YPHI+ F D
Sbjct: 241 QSSTLDFKVQYSSIVRVYLLPKPHSNQSHAVIALDPPIRKGQTFYPHILAMFNDD----- 295
Query: 179 ELLMSEELLNTKYKDK---LEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVK 235
+ L E L KDK LE +Y G EVF +L+ ++G K+T+ F ++ G+A++
Sbjct: 296 DHLTVEPNLAADMKDKFPTLESTYDGSSGEVFVRVLKNMAGVKLTRQSLFTASAGGHAIR 355
Query: 236 SSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAA-GGSNMHYFDLLIRLKTE 294
S KA+ G+LYPLEK+FF+LPKPP L+ + E+D VEFERH+A G ++ FD+ + +K
Sbjct: 356 VSHKADVGLLYPLEKAFFYLPKPPLLLHYSEVDEVEFERHSAQGATSGRTFDVSVNMKNG 415
Query: 295 QEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKN 354
+ F IQR+E+ NL +F++ K ++I N+ D + A +DDD+ + R
Sbjct: 416 SSYDFHGIQRSEFQNLVNFLTAKQVRISNVDANARADQLIAEASDDDDEG---YARR--- 469
Query: 355 EAGGDESDEEDSDFVADKD-DGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSSVKA 413
GD+ EED DF A + DGG PTD + +SD
Sbjct: 470 ---GDDDSEEDEDFAAGSESDGGEPTDSDSDSESDEGAK--------------------- 505
Query: 414 STSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGR 473
K ++ KKDPNAPKR +S ++FFS +R I +NP TDV +
Sbjct: 506 ----------KSKKSPKAKRAKKDPNAPKRGLSAYMFFSAAKRAEITAANPSFGVTDVAK 555
Query: 474 VLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
LGE+WK ++ EE+ Y+ +A DK RY+ E+ Y+
Sbjct: 556 ALGEKWKTITDEEKSVYQQQADEDKIRYEREMEAYR 591
>gi|255087726|ref|XP_002505786.1| histone chaperone [Micromonas sp. RCC299]
gi|226521056|gb|ACO67044.1| histone chaperone [Micromonas sp. RCC299]
Length = 643
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 205/531 (38%), Positives = 300/531 (56%), Gaps = 49/531 (9%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQ 61
+TF V K+ FE+S DV+ + K++V+LEFH+DD KD+++E+SF++P +N
Sbjct: 121 ITFDVEGKRQFEISSKDVAAVAMPTKHEVMLEFHMDDAVMNASKDAMVEMSFYVPPTNKT 180
Query: 62 F----VGDENHPP----AQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHL 113
+ G ++H P A+ D++M + DV +A+ F+ ++++ PRG+ +EL
Sbjct: 181 WGVDGWGTDDHDPDDTGAKRLSDRLMEVCDVDTATGDAIAEFDSVSLVAPRGKVGIELFA 240
Query: 114 SFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETD 173
+ LRL G A DFKIQ+SS+ RLFLLPK T+ ++ LDPPIRKGQT YPHIV F +
Sbjct: 241 NHLRLNGNAVDFKIQHSSIQRLFLLPKPTNAQTYAILHLDPPIRKGQTFYPHIVAVFNAN 300
Query: 174 YVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYA 233
++ E LM + L K D +E SY G EVF +L+ ++G K+T+ G F S G+A
Sbjct: 301 EELEVEPLM-DAALKEKLGDAVEDSYDGPSSEVFIRLLKAVAGVKLTRQGTFASPAGGHA 359
Query: 234 VKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHA-AGGSNMHYFDLLIRLK 292
VK+S KAE G LYPLEKSFF+LPKPP L+ + E+ +EFERHA AG + FD+ + ++
Sbjct: 360 VKASNKAEVGHLYPLEKSFFYLPKPPMLLPYAEVTEIEFERHAGAGPTTQRTFDMAVSMR 419
Query: 293 TEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERI 352
H F +I ++E+ NL F++ K LKI+N+ D + + D D D H R+
Sbjct: 420 NGAVHQFHSIPKSEFQNLVSFLTAKKLKIVNVDAQARADAI--IDGADSDSDRDHHAARL 477
Query: 353 KNEA----------GGDESDEEDSDFVADKD-DGGSPTDDSGEEDSDASESGGEKEKPAK 401
K + GG +S EED DF A + D G PTD SG E S++ E +P K
Sbjct: 478 KAKVKKRELDEDGFGGSDS-EEDEDFNAGSESDDGEPTDSSGSEGSESEEEA----RPKK 532
Query: 402 KESKKESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKK 461
K K + K KKDPN PKR +S F+ FS+ R ++ +
Sbjct: 533 KTKSKAKAK---------------------AKAKKDPNEPKRPLSAFMIFSKETRGDVLE 571
Query: 462 SNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYKNPK 512
NP A DVG+ LG RW+++ E ++ +E+KA K Y+ + YK K
Sbjct: 572 KNPDFALGDVGKELGRRWREIDPELKKEFEAKAADAKVAYEAAMKEYKAGK 622
>gi|302847869|ref|XP_002955468.1| hypothetical protein VOLCADRAFT_76727 [Volvox carteri f.
nagariensis]
gi|300259310|gb|EFJ43539.1| hypothetical protein VOLCADRAFT_76727 [Volvox carteri f.
nagariensis]
Length = 645
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 173/358 (48%), Positives = 236/358 (65%), Gaps = 10/358 (2%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQ 61
L FMVG K AFE+ LADV Q Q K+DV+LE HVDDT G +D L E++F++P N +
Sbjct: 122 LAFMVGSKVAFELPLADVCTAQ-QMKDDVMLELHVDDTGGEVAEDMLQELAFYVPPGNEE 180
Query: 62 FVG-DENHPPAQVFRDKIMS-MADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQ 119
F E+ P ++ D ++ A +E V F + IL PRGR+ +E+HL +L+L
Sbjct: 181 FPARGEDVPASKALLDALLPHADTEAAAADEPVCVFSEVGILAPRGRFDIEMHLGYLQLG 240
Query: 120 GQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSE 179
GQ+ DFK++Y+S+ R+F+LPK N PHT VV++LDPPIRKGQT Y H++ QF T+ + E
Sbjct: 241 GQSQDFKVRYTSIQRIFILPKQNTPHTLVVISLDPPIRKGQTYYAHLLCQFPTEDDITVE 300
Query: 180 LLMSEELL---NTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQ-DGYAVK 235
L +SEE L N K KL G +HEVF +LRGLSGA+ITKPG FR+A DG++V+
Sbjct: 301 LDISEEALVSKNEKNGGKLSSEMSGPVHEVFAKLLRGLSGARITKPGHFRNAAGDGFSVR 360
Query: 236 SSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGG--SNMHYFDLLIRLKT 293
S KA+DG LYPL++ FF++ KPP LI +I+ VEF R +G S++ FDL+IRLK
Sbjct: 361 CSYKADDGQLYPLDRGFFYVHKPPLLIPDNDIESVEFARQGSGAVSSSVRTFDLVIRLKG 420
Query: 294 EQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLER 351
EH+FRNIQR+E+ NLF+FI+ K + I NL K G A + +DD +DP + R
Sbjct: 421 GTEHMFRNIQRSEWGNLFEFINTKKIPIENLASAKRGPGGAHAGVDAEDD-MDPGMRR 477
>gi|354488105|ref|XP_003506211.1| PREDICTED: FACT complex subunit SSRP1-like isoform 1 [Cricetulus
griseus]
gi|354488107|ref|XP_003506212.1| PREDICTED: FACT complex subunit SSRP1-like isoform 2 [Cricetulus
griseus]
gi|344253527|gb|EGW09631.1| FACT complex subunit SSRP1 [Cricetulus griseus]
Length = 709
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 187/520 (35%), Positives = 283/520 (54%), Gaps = 35/520 (6%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F +G + E+ L++VSQ GKN+V LEFH +D SLME+ F++P +
Sbjct: 118 LLSFDIGDQPVLEIPLSNVSQCT-TGKNEVTLEFHQNDDAEV----SLMEVRFYVPPTQE 172
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P + F ++S ADV +A+ F + LTPRGRY + ++ +FL L G
Sbjct: 173 DGV-----DPVEAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F D + L
Sbjct: 228 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
M+EE + +++ +L + G ++E+ + +++ L KIT PG F+ + S KA
Sbjct: 288 NMNEEEVEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP I +EI +V F R G + FD I K ++ F
Sbjct: 348 SSGLLYPLERGFIYVHKPPVHIRFDEISFVNFAR---GTTTTRSFDFEIETKQGTQYTFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
+I+R EY LFDF++ K L I N G + + + D+D D +LER+K E E
Sbjct: 405 SIEREEYGKLFDFVNAKKLNIKNRGLKEGMNPSYDDYADSDEDQHDAYLERMKEEGKIRE 464
Query: 361 SDEEDSDFVADKDDGGSPTDDS---GEEDSDASE--------SGGEKEKPAKKESKKESS 409
+ DS DD G TD+S GEE+ D +E S E + +E KK
Sbjct: 465 ENANDSS-----DDSGEETDESFNPGEEEDDVAEEFDSNASASSSSNEGDSDREEKKRKQ 519
Query: 410 SVKASTSK-KKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAF 468
+A +K +KSR K + KK KDPNAPKR MS ++ + RE IK +PGI+
Sbjct: 520 LKRAKMAKDRKSRK-----KSSEAKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISI 574
Query: 469 TDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGY 508
TD+ + GE WK MS E++E ++ KA ++ Y+ + Y
Sbjct: 575 TDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAMKEY 614
>gi|326920276|ref|XP_003206400.1| PREDICTED: FACT complex subunit SSRP1-like [Meleagris gallopavo]
Length = 706
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 184/513 (35%), Positives = 278/513 (54%), Gaps = 23/513 (4%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F +G++ FE+ L++VSQ GKN+V LEFH +D SLME+ F++P +
Sbjct: 118 LLSFDIGEQPVFEIPLSNVSQCT-TGKNEVTLEFHQNDDAEV----SLMEVRFYVPPTQE 172
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P + F ++S ADV +A+ F + LTPRGRY + ++ +FL L G
Sbjct: 173 DGVD-----PVEAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F D + L
Sbjct: 228 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
M+EE + +++ +L + G ++E+ + +++ L KIT PG F+ + S KA
Sbjct: 288 NMNEEEVEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP I +EI +V F R G + FD I K ++ F
Sbjct: 348 SSGLLYPLERGFIYVHKPPVHIRFDEISFVNFAR---GTTTTRSFDFEIETKQGTQYTFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
+I+R EY LFDF++ K L I N G + + D+D D +LER+K E E
Sbjct: 405 SIEREEYGKLFDFVNAKKLNIKNRGLKEGMKQSYDEYADSDEDQHDAYLERMKEEGKIRE 464
Query: 361 SDEEDSDFVADKDDGGSPTDDS---GEEDSDASESGGEKEKPAKKESKKESSSVKASTSK 417
+ DS D G TD+S GEED D +E + +S + +K
Sbjct: 465 ENANDSS-----DGSGEETDESFNPGEEDDDVAEEFDSNASASSSSGDGDSDRGEKKPAK 519
Query: 418 KKSRDGDEDGKKKK--QKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVL 475
K D +KK+ KK KDPNAPKR MS ++ + RE IK +PGI+ TD+ +
Sbjct: 520 KAKIVKDRKPRKKQVESKKGKDPNAPKRPMSAYMLWLNANREKIKSDHPGISITDLSKKA 579
Query: 476 GERWKKMSVEEREPYESKARADKKRYKDEISGY 508
GE WK MS E++E ++ KA K+ Y+ + Y
Sbjct: 580 GELWKAMSKEKKEEWDRKAEDAKRDYEKAMKEY 612
>gi|218117885|dbj|BAH03305.1| structure-specific recognition protein 1 [Gallus gallus]
Length = 706
Score = 314 bits (804), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 184/513 (35%), Positives = 278/513 (54%), Gaps = 23/513 (4%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F +G++ FE+ L++VSQ GKN+V LEFH +D SLME+ F++P +
Sbjct: 118 LLSFDIGEQPVFEIPLSNVSQCT-TGKNEVTLEFHQNDDAEV----SLMEVRFYVPPTQE 172
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P + F ++S ADV +A+ F + LTPRGRY + ++ +FL L G
Sbjct: 173 DGVD-----PVEAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F D + L
Sbjct: 228 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
M+EE + +++ +L + G ++E+ + +++ L KIT PG F+ + S KA
Sbjct: 288 NMNEEEVEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP I +EI +V F R G + FD I K ++ F
Sbjct: 348 SSGLLYPLERGFIYVHKPPVHIRFDEISFVNFAR---GTTTTRSFDFEIETKQGTQYTFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
+I+R EY LFDF++ K L I N G + + D+D D +LER+K E E
Sbjct: 405 SIEREEYGKLFDFVNAKKLNIKNRGLKEGMKQSYDEYADSDEDQHDAYLERMKEEGKIRE 464
Query: 361 SDEEDSDFVADKDDGGSPTDDS---GEEDSDASESGGEKEKPAKKESKKESSSVKASTSK 417
+ DS D G TD+S GEED D +E + +S + +K
Sbjct: 465 ENANDSS-----DGSGEETDESFNPGEEDDDVAEEFDSNASASSSSGDGDSDRGEKKPAK 519
Query: 418 KKSRDGDEDGKKKK--QKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVL 475
K D +KK+ KK KDPNAPKR MS ++ + RE IK +PGI+ TD+ +
Sbjct: 520 KAKIVKDRKPRKKQVESKKGKDPNAPKRPMSAYMLWLNANREKIKSDHPGISITDLSKKA 579
Query: 476 GERWKKMSVEEREPYESKARADKKRYKDEISGY 508
GE WK MS E++E ++ KA K+ Y+ + Y
Sbjct: 580 GELWKAMSKEKKEEWDRKAEDAKRDYEKAMKEY 612
>gi|57524786|ref|NP_001005796.1| FACT complex subunit SSRP1 [Gallus gallus]
gi|110283005|sp|Q04678.2|SSRP1_CHICK RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=Recombination signal sequence recognition protein
1; AltName: Full=Structure-specific recognition protein
1; AltName: Full=T160
gi|53128417|emb|CAG31300.1| hypothetical protein RCJMB04_4n20 [Gallus gallus]
Length = 706
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 184/513 (35%), Positives = 278/513 (54%), Gaps = 23/513 (4%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F +G++ FE+ L++VSQ GKN+V LEFH +D SLME+ F++P +
Sbjct: 118 LLSFDIGEQPVFEIPLSNVSQCT-TGKNEVTLEFHQNDDAEV----SLMEVRFYVPPTQE 172
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P + F ++S ADV +A+ F + LTPRGRY + ++ +FL L G
Sbjct: 173 DGVD-----PVEAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F D + L
Sbjct: 228 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
M+EE + +++ +L + G ++E+ + +++ L KIT PG F+ + S KA
Sbjct: 288 NMNEEEVEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP I +EI +V F R G + FD I K ++ F
Sbjct: 348 SSGLLYPLERGFIYVHKPPVHIRFDEISFVNFAR---GTTTTRSFDFEIETKQGTQYTFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
+I+R EY LFDF++ K L I N G + + D+D D +LER+K E E
Sbjct: 405 SIEREEYGKLFDFVNAKKLNIKNRGLKEGMKQSYDEYADSDEDQHDAYLERMKEEGKIRE 464
Query: 361 SDEEDSDFVADKDDGGSPTDDS---GEEDSDASESGGEKEKPAKKESKKESSSVKASTSK 417
+ DS D G TD+S GEED D +E + +S + +K
Sbjct: 465 ENANDSS-----DGSGEETDESFNPGEEDDDVAEEFDSNASASSSSGDGDSDRGEKKPAK 519
Query: 418 KKSRDGDEDGKKKK--QKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVL 475
K D +KK+ KK KDPNAPKR MS ++ + RE IK +PGI+ TD+ +
Sbjct: 520 KAKIVKDRKPRKKQVESKKGKDPNAPKRPMSAYMLWLNANREKIKSDHPGISITDLSKKA 579
Query: 476 GERWKKMSVEEREPYESKARADKKRYKDEISGY 508
GE WK MS E++E ++ KA K+ Y+ + Y
Sbjct: 580 GELWKAMSKEKKEEWDRKAEDAKRDYEKAMKEY 612
>gi|449272347|gb|EMC82325.1| FACT complex subunit SSRP1 [Columba livia]
Length = 704
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 183/513 (35%), Positives = 280/513 (54%), Gaps = 23/513 (4%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F +G++ FE+ L++VSQ GKN+V LEFH +D + + SLME+ F++P +
Sbjct: 118 LLSFDIGEQPVFEIPLSNVSQCT-TGKNEVTLEFHQND----DAEVSLMEVRFYVPPTQE 172
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P + F ++S ADV +A+ F + LTPRGRY + ++ +FL L G
Sbjct: 173 DGVD-----PVEAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F D + L
Sbjct: 228 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
M+EE + +++ +L + G ++E+ + +++ L KIT PG F+ + S KA
Sbjct: 288 NMNEEEVEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP I +EI +V F R G + FD I K ++ F
Sbjct: 348 SSGLLYPLERGFIYVHKPPVHIRFDEISFVNFAR---GTTTTRSFDFEIETKQGTQYTFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
+I+R EY LFDF++ K L I N G + + D+D D +LER+K E E
Sbjct: 405 SIEREEYGKLFDFVNAKKLNIKNRGLKEGMKQSYDEYADSDEDQHDAYLERMKEEGKIRE 464
Query: 361 SDEEDSDFVADKDDGGSPTDDS---GEEDSDASESGGEKEKPAKKESKKESSSVKASTSK 417
+ DS D G TD+S GEED D +E + +S + +K
Sbjct: 465 ENANDSS-----DGSGEETDESFNPGEEDDDVAEEFDSNASASSSSGDGDSDQDEKKPAK 519
Query: 418 KKSRDGDEDGKKKK--QKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVL 475
K D +KK+ KK KDPNAPKR MS ++ + RE IK +PGI+ TD+ +
Sbjct: 520 KAKLVKDRKPRKKQPESKKGKDPNAPKRPMSAYMLWLNASRERIKSDHPGISITDLSKKA 579
Query: 476 GERWKKMSVEEREPYESKARADKKRYKDEISGY 508
GE WK MS E++E ++ KA ++ Y+ + Y
Sbjct: 580 GELWKAMSKEKKEEWDRKAEDARRDYEKAMKEY 612
>gi|211520|gb|AAA48685.1| HMG box (bp. 1499..1757), partial [Gallus gallus]
Length = 669
Score = 311 bits (796), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 181/514 (35%), Positives = 274/514 (53%), Gaps = 24/514 (4%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F +G++ FE+ L++VSQ GKN+V LEFH +D SLME+ F++P +
Sbjct: 80 LLSFDIGEQPVFEIPLSNVSQCTT-GKNEVTLEFHQNDDAEV----SLMEVRFYVPPTQE 134
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P + F ++S ADV +A+ F + LTPRGRY + ++ +FL L G
Sbjct: 135 DGVD-----PVEAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHG 189
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F D + L
Sbjct: 190 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTL 249
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
M+EE + +++ +L + G ++E+ + +++ L KIT PG F+ + S KA
Sbjct: 250 NMNEEEVEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKA 309
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP I +EI +V F R G + FD I K ++ F
Sbjct: 310 SSGLLYPLERGFIYVHKPPVHIRFDEISFVNFAR---GTTTTRSFDFEIETKQGTQYTFS 366
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
+I+R EY LFDF++ K L I N G + + D+D D +LER+K E E
Sbjct: 367 SIEREEYGKLFDFVNAKKLNIKNRGLKEGMKQSYDEYADSDEDQHDAYLERMKEEGKIRE 426
Query: 361 SDEEDSDFVADKDDGGSPTDDS---GEEDSDASE---SGGEKEKPAKKESKKESSSVKAS 414
+ DS D G TD+S GEED D +E S + +
Sbjct: 427 ENANDSS-----DGSGEETDESFNPGEEDDDVAEEFDSNASSSSSSGDGDSDRGEKKSSQ 481
Query: 415 TSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRV 474
K +D K+ + KK KDPN PKR MS ++ + RE IK +PGI+ TD+ +
Sbjct: 482 EGPKIVKDRKPRKKQVESKKGKDPNVPKRPMSAYMLWLNANREKIKSDHPGISITDLSKK 541
Query: 475 LGERWKKMSVEEREPYESKARADKKRYKDEISGY 508
GE WK MS E++E ++ KA K+ Y+ + Y
Sbjct: 542 AGELWKAMSKEKKEEWDRKAEDAKRDYEKAMKEY 575
>gi|126333240|ref|XP_001376238.1| PREDICTED: FACT complex subunit SSRP1 [Monodelphis domestica]
Length = 712
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 186/524 (35%), Positives = 283/524 (54%), Gaps = 43/524 (8%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F +G++ FE+ L++VSQ GKN+V LEFH +D SLME+ F++P +
Sbjct: 118 LLSFDIGEQPVFEIPLSNVSQCT-TGKNEVTLEFHQNDDAEV----SLMEVRFYVPPTQE 172
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P + F ++S ADV +A+ F + LTPRGRY + ++ +FL L G
Sbjct: 173 DGVD-----PVEAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F D + L
Sbjct: 228 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
M+E+ + +++ +L + G ++E+ + +++ L KIT PG F+ + S KA
Sbjct: 288 NMNEDEVEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP I +EI +V F R G + FD I K ++ F
Sbjct: 348 SSGLLYPLERGFIYVHKPPVHIRFDEISFVNFAR---GTTTTRSFDFEIETKQGTQYTFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
+I+R EY LFDF++ K L I N G + + + D+D D +LER+K E E
Sbjct: 405 SIEREEYGKLFDFVNAKKLNIKNRGLKEGINPSYDEYADSDEDQHDAYLERMKEEGKIRE 464
Query: 361 SDEEDSDFVADKDDGGSPTDDS---GEEDSDASE-------------SGGEKEKPAKKES 404
+ DS DD G TD+S G+E+ D +E G KK+
Sbjct: 465 ENANDSS-----DDSGDETDESFNPGDEEDDVAEEFDSNASASSSSNEGDSDRDEKKKKL 519
Query: 405 KKESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNP 464
K++ VK S+KK +G KK KDPNAPKR MS ++ + RE IK +P
Sbjct: 520 AKKAKIVKERKSRKKPVEG---------KKGKDPNAPKRPMSAYMLWLNASREKIKSDHP 570
Query: 465 GIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGY 508
GI+ TD+ + GE WK MS E++E ++ KA K+ Y+ + Y
Sbjct: 571 GISITDLSKKAGEIWKGMSKEKKEEWDRKAEEAKREYEKAMKEY 614
>gi|348556930|ref|XP_003464273.1| PREDICTED: FACT complex subunit SSRP1-like [Cavia porcellus]
Length = 709
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 188/520 (36%), Positives = 284/520 (54%), Gaps = 35/520 (6%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F +G + FE+ L++VSQ GKN+V LEFH +D + + SLME+ F++P +
Sbjct: 118 LLSFDIGDQPVFEIPLSNVSQCTT-GKNEVTLEFHQND----DAEVSLMEVRFYVPPTQE 172
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P + F ++S ADV +A+ F + LTPRGRY + ++ +FL L G
Sbjct: 173 DGVD-----PVEAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F D + L
Sbjct: 228 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
MSEE + +++ +L + G ++E+ + +++ L KIT PG F+ + S KA
Sbjct: 288 NMSEEEVEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP I +EI +V F R G + FD I K ++ F
Sbjct: 348 SSGLLYPLERGFIYVHKPPVHIRFDEISFVNFAR---GTTTTRSFDFEIETKQGTQYTFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
+I+R EY LFDF++ K L I N G + + + D+D D +LER+K E E
Sbjct: 405 SIEREEYGKLFDFVNAKKLNIKNRGLKEGMNPSYDEYADSDEDQHDAYLERMKEEGKIRE 464
Query: 361 SDEEDSDFVADKDDGGSPTDDSGEE-----------DSDASESGGEKEKPAKKESKKESS 409
+ DS DD G TD+S DS+AS S E + +E KK
Sbjct: 465 ENANDSS-----DDSGEETDESFNPGEEEEDVAEEFDSNASASSSSNEGDSDREEKKRKQ 519
Query: 410 SVKASTSK-KKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAF 468
+A +K +KSR K + KK KDPNAPKR MS ++ + RE IK +PGI+
Sbjct: 520 LKRAKMTKDRKSRK-----KTVEAKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISI 574
Query: 469 TDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGY 508
TD+ + GE WK MS E++E ++ KA ++ Y+ + Y
Sbjct: 575 TDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAMKEY 614
>gi|395544035|ref|XP_003773918.1| PREDICTED: FACT complex subunit SSRP1 [Sarcophilus harrisii]
Length = 712
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 185/524 (35%), Positives = 283/524 (54%), Gaps = 43/524 (8%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F +G++ FE+ L++VSQ GKN+V LEFH +D SLME+ F++P +
Sbjct: 118 LLSFDIGEQPVFEIPLSNVSQCT-TGKNEVTLEFHQNDDAEV----SLMEVRFYVPPTQE 172
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P + F ++S ADV +A+ F + LTPRGRY + ++ +FL L G
Sbjct: 173 DGVD-----PVEAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F D + L
Sbjct: 228 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
M+E+ + +++ +L + G ++E+ + +++ L KIT PG F+ + S KA
Sbjct: 288 NMNEDEVEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP I +EI +V F R G + FD I K ++ F
Sbjct: 348 SSGLLYPLERGFIYVHKPPVHIRFDEISFVNFAR---GTTTTRSFDFEIETKQGTQYTFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
+I+R EY LFDF++ K L I N G + + + D+D D +LER+K E E
Sbjct: 405 SIEREEYGKLFDFVNAKKLNIKNRGLKEGINPSYDEYADSDEDQHDAYLERMKEEGKIRE 464
Query: 361 SDEEDSDFVADKDDGGSPTDDS---GEEDSDASE-------------SGGEKEKPAKKES 404
+ DS DD G TD+S G+E+ D +E G KK+
Sbjct: 465 ENANDSS-----DDSGDETDESFNPGDEEDDVAEEFDSNASASSSSNEGDSDRDEKKKKL 519
Query: 405 KKESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNP 464
K++ VK S+KK +G KK KDPNAPKR MS ++ + RE IK +P
Sbjct: 520 AKKAKIVKERKSRKKPVEG---------KKGKDPNAPKRPMSAYMLWLNASREKIKSDHP 570
Query: 465 GIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGY 508
GI+ TD+ + GE WK MS +++E ++ KA K+ Y+ + Y
Sbjct: 571 GISITDLSKKAGEIWKGMSKDKKEEWDRKAEEAKREYEKAMKEY 614
>gi|111154063|ref|NP_892035.2| FACT complex subunit SSRP1 [Mus musculus]
gi|209862973|ref|NP_001129553.1| FACT complex subunit SSRP1 [Mus musculus]
gi|110283006|sp|Q08943.2|SSRP1_MOUSE RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=Recombination signal sequence recognition protein
1; AltName: Full=Structure-specific recognition protein
1; AltName: Full=T160
gi|74138726|dbj|BAE27178.1| unnamed protein product [Mus musculus]
gi|74144584|dbj|BAE27280.1| unnamed protein product [Mus musculus]
gi|74144625|dbj|BAE27299.1| unnamed protein product [Mus musculus]
gi|74177273|dbj|BAE34555.1| unnamed protein product [Mus musculus]
Length = 708
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 187/520 (35%), Positives = 282/520 (54%), Gaps = 35/520 (6%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F +G + FE+ L++VSQ GKN+V LEFH +D SLME+ F++P +
Sbjct: 118 LLSFDIGDQPVFEIPLSNVSQCTT-GKNEVTLEFHQNDDAEV----SLMEVRFYVPPTQE 172
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P + F ++S ADV +A+ F + LTPRGRY + ++ +FL L G
Sbjct: 173 DGVD-----PVEAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F D + L
Sbjct: 228 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
M+EE + +++ +L + G ++E+ + +++ L KIT PG F+ + S KA
Sbjct: 288 NMNEEEVEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP I +EI +V F R G + FD I K ++ F
Sbjct: 348 SSGLLYPLERGFIYVHKPPVHIRFDEISFVNFAR---GTTTTRSFDFEIETKQGTQYTFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
+I+R EY LFDF++ K L I N G + + + D+D D +LER+K E E
Sbjct: 405 SIEREEYGKLFDFVNAKKLNIKNRGLKEGINPGYDDYADSDEDQHDAYLERMKEEGKIRE 464
Query: 361 SDEEDSDFVADKDDGGSPTDDSGEE-----------DSDASESGGEKEKPAKKESKKESS 409
+ DS DD G TD+S DS+AS S E + +E KK
Sbjct: 465 ENANDSS-----DDSGEETDESFNPGEEEEDVAEEFDSNASASSSSNEGDSDREEKKREQ 519
Query: 410 SVKASTSK-KKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAF 468
+A +K +KSR K + KK KDPNAPKR MS ++ + RE IK +PGI+
Sbjct: 520 LKRAKMAKDRKSRR-----KSSEAKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISI 574
Query: 469 TDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGY 508
TD+ + GE WK MS E++E ++ KA ++ Y+ + Y
Sbjct: 575 TDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAMKEY 614
>gi|27502780|gb|AAH42502.1| Ssrp1 protein [Mus musculus]
Length = 711
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 187/520 (35%), Positives = 284/520 (54%), Gaps = 35/520 (6%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F +G + FE+ L++VSQ GKN+V LEFH +D + + SLME+ F++P +
Sbjct: 118 LLSFDIGDQPVFEIPLSNVSQCT-TGKNEVTLEFHQND----DAEVSLMEVRFYVPPTQE 172
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P + F ++S ADV +A+ F + LTPRGRY + ++ +FL L G
Sbjct: 173 DGV-----DPVEAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F D + L
Sbjct: 228 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
M+EE + +++ +L + G ++E+ + +++ L KIT PG F+ + S KA
Sbjct: 288 NMNEEEVEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP I +EI +V F R G + FD I K ++ F
Sbjct: 348 SSGLLYPLERGFIYVHKPPVHIRFDEISFVNFAR---GTTTTRSFDFEIETKQGTQYTFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
+I+R EY LFDF++ K L I N G + + + D+D D +LER+K E E
Sbjct: 405 SIEREEYGKLFDFVNAKKLNIKNRGLKEGINPGYDDYADSDEDQHDAYLERMKEEGKIRE 464
Query: 361 SDEEDSDFVADKDDGGSPTDDSGEE-----------DSDASESGGEKEKPAKKESKKESS 409
+ DS DD G TD+S DS+AS S E + +E KK
Sbjct: 465 ENANDSS-----DDSGEETDESFNPGEEEEDVAEEFDSNASASSSSNEGDSDREEKKREQ 519
Query: 410 SVKASTSK-KKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAF 468
+A +K +KSR K + KK KDPNAPKR MS ++ + RE IK +PGI+
Sbjct: 520 LKRAKMAKDRKSRR-----KSSEAKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISI 574
Query: 469 TDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGY 508
TD+ + GE WK MS E++E ++ KA ++ Y+ + Y
Sbjct: 575 TDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAMKEY 614
>gi|116283314|gb|AAH04848.1| Ssrp1 protein [Mus musculus]
Length = 633
Score = 307 bits (786), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 187/520 (35%), Positives = 284/520 (54%), Gaps = 35/520 (6%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F +G + FE+ L++VSQ GKN+V LEFH +D + + SLME+ F++P +
Sbjct: 118 LLSFDIGDQPVFEIPLSNVSQCT-TGKNEVTLEFHQND----DAEVSLMEVRFYVPPTQE 172
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P + F ++S ADV +A+ F + LTPRGRY + ++ +FL L G
Sbjct: 173 DGV-----DPVEAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F D + L
Sbjct: 228 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
M+EE + +++ +L + G ++E+ + +++ L KIT PG F+ + S KA
Sbjct: 288 NMNEEEVEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP I +EI +V F R G + FD I K ++ F
Sbjct: 348 SSGLLYPLERGFIYVHKPPVHIRFDEISFVNFAR---GTTTTRSFDFEIETKQGTQYTFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
+I+R EY LFDF++ K L I N G + + + D+D D +LER+K E E
Sbjct: 405 SIEREEYGKLFDFVNAKKLNIKNRGLKEGINPGYDDYADSDEDQHDAYLERMKEEGKIRE 464
Query: 361 SDEEDSDFVADKDDGGSPTDDSGEE-----------DSDASESGGEKEKPAKKESKKESS 409
+ DS DD G TD+S DS+AS S E + +E KK
Sbjct: 465 ENANDSS-----DDSGEETDESFNPGEEEEDVAEEFDSNASASSSSNEGDSDREEKKREQ 519
Query: 410 SVKASTSK-KKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAF 468
+A +K +KSR K + KK KDPNAPKR MS ++ + RE IK +PGI+
Sbjct: 520 LKRAKMAKDRKSRR-----KSSEAKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISI 574
Query: 469 TDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGY 508
TD+ + GE WK MS E++E ++ KA ++ Y+ + Y
Sbjct: 575 TDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAMKEY 614
>gi|351707228|gb|EHB10147.1| FACT complex subunit SSRP1 [Heterocephalus glaber]
Length = 709
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 183/520 (35%), Positives = 285/520 (54%), Gaps = 35/520 (6%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F +G++ FE+ L++VSQ GKN+V LEFH +D + + SLME+ F++P +
Sbjct: 118 LLSFDIGEQPVFEIPLSNVSQCTT-GKNEVTLEFHQND----DAEVSLMEVRFYVPPTQ- 171
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
++ P + F ++S ADV +A+ F + LTPRGRY + ++ +FL L G
Sbjct: 172 ----EDGIDPVEAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F D + L
Sbjct: 228 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
M+EE + +++ +L + G ++E+ + +++ L KIT PG F+ + S KA
Sbjct: 288 NMNEEEVEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP I +EI +V F R G + FD I K ++ F
Sbjct: 348 SSGLLYPLERGFIYVHKPPVHIRFDEIAFVNFAR---GTTTTRSFDFEIETKQGTQYTFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
+I+R EY LFDF++ K L I N G + + + D+D D +LER+K E E
Sbjct: 405 SIEREEYGKLFDFVNAKKLNIKNRGLKEGMNPSYDEYADSDEDQHDAYLERMKEEGKIRE 464
Query: 361 SDEEDSDFVADKDDGGSPTDDSGEE-----------DSDASESGGEKEKPAKKESKKESS 409
+ DS +D G TD+S DS+AS S E + +E K+
Sbjct: 465 ENANDSS-----EDSGEETDESFNPGEEEEDVAEEFDSNASASSSSNEGDSAREEKRRKQ 519
Query: 410 SVKASTSK-KKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAF 468
+A +K +KSR K + KK KDPNAPKR MS ++ + RE IK +PGI+
Sbjct: 520 LKRAKVAKDRKSRK-----KTVEAKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISI 574
Query: 469 TDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGY 508
TD+ + GE WK M E++E ++ KA ++ Y+ + Y
Sbjct: 575 TDLSKKAGEIWKGMPKEKKEEWDHKAEDARREYEKAMKEY 614
>gi|296479522|tpg|DAA21637.1| TPA: structure specific recognition protein 1 [Bos taurus]
Length = 709
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 182/522 (34%), Positives = 282/522 (54%), Gaps = 39/522 (7%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F +G + FE+ L++VSQ GKN+V LEFH +D + + SLME+ F++P +
Sbjct: 118 LLSFDIGDQPVFEIPLSNVSQCT-TGKNEVTLEFHQND----DAEVSLMEVRFYVPPTQE 172
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P + F ++S ADV +A+ F + LTPRGRY + ++ +FL L G
Sbjct: 173 DGVD-----PVEAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F D + L
Sbjct: 228 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
M+EE + +++ +L + G ++E+ + +++ L KIT PG F+ + S KA
Sbjct: 288 NMNEEKVEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP I +EI +V F R G + FD I K ++ F
Sbjct: 348 SSGLLYPLERGFIYVHKPPVHIRFDEISFVNFAR---GTTTTRSFDFEIETKQGTQYTFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
+I+R EY LFDF++ K L I N G + + + D+D D +LER+K E E
Sbjct: 405 SIEREEYGKLFDFVNAKKLNIKNRGLKEGMNPSYDEYADSDEDQHDAYLERMKEEGKIRE 464
Query: 361 SDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKK--------------ESKK 406
+ DS +DDSGEE ++ G E+E A++ +S +
Sbjct: 465 ENANDS------------SDDSGEETDESFNPGEEEEDVAEEFDSNASASSSSNEGDSDR 512
Query: 407 ESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGI 466
E K K ++D K + KK KDPNAPKR MS ++ + RE IK +PGI
Sbjct: 513 EEKKRKQLKKAKMAKDRKSRKKPLEVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI 572
Query: 467 AFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGY 508
+ TD+ + GE WK MS E++E ++ KA ++ Y+ + Y
Sbjct: 573 SVTDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAMKEY 614
>gi|155371817|ref|NP_001094511.1| FACT complex subunit SSRP1 [Bos taurus]
gi|151554654|gb|AAI49986.1| SSRP1 protein [Bos taurus]
gi|440894802|gb|ELR47155.1| FACT complex subunit SSRP1 [Bos grunniens mutus]
Length = 709
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 182/523 (34%), Positives = 283/523 (54%), Gaps = 39/523 (7%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F +G + FE+ L++VSQ GKN+V LEFH +D + + SLME+ F++P +
Sbjct: 118 LLSFDIGDQPVFEIPLSNVSQCT-TGKNEVTLEFHQND----DAEVSLMEVRFYVPPTQE 172
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P + F ++S ADV +A+ F + LTPRGRY + ++ +FL L G
Sbjct: 173 DGVD-----PVEAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F D + L
Sbjct: 228 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
M+EE + +++ +L + G ++E+ + +++ L KIT PG F+ + S KA
Sbjct: 288 NMNEEEVEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP I +EI +V F R G + FD I K ++ F
Sbjct: 348 SSGLLYPLERGFIYVHKPPVHIRFDEISFVNFAR---GTTTTRSFDFEIETKQGTQYTFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
+I+R EY LFDF++ K L I N G + + + D+D D +LER+K E E
Sbjct: 405 SIEREEYGKLFDFVNAKKLNIKNRGLKEGMNPSYDEYADSDEDQHDAYLERMKEEGKIRE 464
Query: 361 SDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKK--------------ESKK 406
+ DS +DDSGEE ++ G E+E A++ +S +
Sbjct: 465 ENANDS------------SDDSGEETDESFNPGEEEEDVAEEFDSNASASSSSNEGDSDR 512
Query: 407 ESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGI 466
E K K ++D K + KK KDPNAPKR MS ++ + RE IK +PGI
Sbjct: 513 EEKKRKQLKKAKMAKDRKSRKKPLEVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI 572
Query: 467 AFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
+ TD+ + GE WK MS E++E ++ KA ++ Y+ + Y+
Sbjct: 573 SVTDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAMKEYE 615
>gi|335281869|ref|XP_003353912.1| PREDICTED: FACT complex subunit SSRP1 [Sus scrofa]
Length = 709
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 181/523 (34%), Positives = 281/523 (53%), Gaps = 39/523 (7%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F +G + FE+ L++VSQ GKN+V LEFH +D SLME+ F++P +
Sbjct: 118 LLSFDIGDQPVFEIPLSNVSQCT-TGKNEVTLEFHQNDDAEV----SLMEVRFYVPPTQE 172
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P + F ++S ADV +A+ F + LTPRGRY + ++ +FL L G
Sbjct: 173 DGVD-----PVEAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F D + L
Sbjct: 228 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
M+EE + +++ +L + G ++E+ + +++ L KIT PG F+ + S KA
Sbjct: 288 NMNEEEVEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP I +EI +V F R G + FD I K ++ F
Sbjct: 348 SSGLLYPLERGFIYVHKPPVHIRFDEISFVNFAR---GTTTTRSFDFEIETKQGTQYTFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
+I+R EY LFDF++ K L I N G + + + D+D D +LER+K E E
Sbjct: 405 SIEREEYGKLFDFVNAKKLNIKNRGLKEGMNPSYDEYADSDEDQHDAYLERMKEEGKIRE 464
Query: 361 SDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKK--------------ESKK 406
+ DS +DDSGEE ++ G E+E A++ +S +
Sbjct: 465 ENANDS------------SDDSGEETDESFNPGEEEEDVAEEFDSNASASSSSNEGDSDR 512
Query: 407 ESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGI 466
+ K K ++D K + KK KDPNAPKR MS ++ + RE IK +PGI
Sbjct: 513 DEKKRKQLKKAKMAKDRKSRKKPTEVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI 572
Query: 467 AFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
+ TD+ + GE WK MS E++E ++ KA ++ Y+ + Y+
Sbjct: 573 SITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAMKEYE 615
>gi|444705434|gb|ELW46861.1| FACT complex subunit SSRP1 [Tupaia chinensis]
Length = 704
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 187/516 (36%), Positives = 285/516 (55%), Gaps = 30/516 (5%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F +G + FE+ L++VSQ GKN+V LEFH +D + + SLME+ F++P +
Sbjct: 118 LLSFDIGDQPVFEIPLSNVSQCT-TGKNEVTLEFHQND----DAEVSLMEVRFYVPPTQE 172
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P + F ++S ADV +A+ F + LTPRGRY + ++ +FL L G
Sbjct: 173 DGVD-----PVEAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F D + L
Sbjct: 228 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
M+EE + +++ +L + G ++E+ + +++ L KIT PG F+ + S KA
Sbjct: 288 NMNEEEVEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP I +EI +V F R G + FD I K ++ F
Sbjct: 348 SSGLLYPLERGFIYVHKPPVHIRFDEISFVNFAR---GTTTTRSFDFEIETKQGTQYTFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
+I+R EY LFDF++ K L I N G + + + D+D D +LER+K E E
Sbjct: 405 SIEREEYGKLFDFVNAKKLNIKNRGLKEGMNPSYDEYADSDEDQHDAYLERMKEEGKIRE 464
Query: 361 SDEEDSDFVADKDDGG------SPTDDSGEEDSDASESGGEKEKPAKKESKKESSSVKAS 414
+ DS DD G +P D G DS+AS S E + ++ KK KA
Sbjct: 465 ENANDSS-----DDSGEETGRLAPELDVGWFDSNASASSSSNEGDSDRDEKKRKQLKKAK 519
Query: 415 TSK-KKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGR 473
+K +KSR K + KK KDPNAPKR MS ++ + RE IK +PGI+ TD+ +
Sbjct: 520 IAKDRKSRK-----KPVEVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSK 574
Query: 474 VLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
GE WK MS E++E ++ KA ++ Y+ + Y+
Sbjct: 575 KAGEIWKGMSKEKKEEWDRKAEDARREYEKAMKEYE 610
>gi|432113411|gb|ELK35821.1| FACT complex subunit SSRP1 [Myotis davidii]
Length = 709
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 181/522 (34%), Positives = 282/522 (54%), Gaps = 39/522 (7%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F +G + FE+ L++VSQ GKN+V LEFH +D + + SLME+ F++P +
Sbjct: 118 LLSFDIGDQPVFEIPLSNVSQCT-TGKNEVTLEFHQND----DAEVSLMEVRFYVPPTQE 172
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P + F ++S ADV +A+ F + LTPRGRY + ++ +FL L G
Sbjct: 173 DGVD-----PVEAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F D + L
Sbjct: 228 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
M+EE + +++ +L + G ++E+ + +++ L KIT PG F+ + S KA
Sbjct: 288 NMNEEEVEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP I +EI +V F R G + FD I K ++ F
Sbjct: 348 SSGLLYPLERGFIYVHKPPVHIRFDEISFVNFAR---GTTTTRSFDFEIETKQGTQYTFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
+I+R EY LFDF++ K L I N G + + + D+D D +LER+K E E
Sbjct: 405 SIEREEYGKLFDFVNAKKLNIKNRGLKEGMNPSYDDYADSDEDQHDAYLERMKEEGKIRE 464
Query: 361 SDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKK--------------ESKK 406
+ DS +DDSGEE ++ G E+E A++ +S +
Sbjct: 465 ENANDS------------SDDSGEETDESFNPGEEEEDVAEEFDSNASASSSSNEGDSDR 512
Query: 407 ESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGI 466
+ K K ++D K + KK KDPNAPKR MS ++ + RE IK +PGI
Sbjct: 513 DEKKRKQLKKAKMAKDRKSRKKPMEVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI 572
Query: 467 AFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGY 508
+ TD+ + GE WK MS E++E ++ KA ++ Y+ + Y
Sbjct: 573 SITDLSKKAGEIWKAMSKEKKEEWDRKAEDARREYEKAMKEY 614
>gi|403254821|ref|XP_003920153.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex subunit SSRP1 [Saimiri
boliviensis boliviensis]
Length = 826
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 181/523 (34%), Positives = 283/523 (54%), Gaps = 39/523 (7%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F +G + FE+ L++VSQ GKN+V LEFH +D + + SLME+ F++P +
Sbjct: 235 LLSFDIGDQPVFEIPLSNVSQCT-TGKNEVTLEFHQND----DAEVSLMEVRFYVPPTQE 289
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P + F ++S ADV +A+ F + LTPRGRY + ++ +FL L G
Sbjct: 290 DGVD-----PVEAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHG 344
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F D + L
Sbjct: 345 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTL 404
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
M+EE + +++ +L + G ++E+ + +++ L KIT PG F+ + S KA
Sbjct: 405 NMNEEEVEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKA 464
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP I +EI +V F R G + FD I K ++ F
Sbjct: 465 SSGLLYPLERGFIYVHKPPVHIRFDEISFVNFAR---GTTTTRSFDFEIETKQGTQYTFS 521
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
+I+R EY LFDF++ K L I N G + + + D+D D +LER+K E E
Sbjct: 522 SIEREEYGKLFDFVNAKKLNIKNRGLKEGMNPSYDEYADSDEDQHDAYLERMKEEGKIRE 581
Query: 361 SDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKK--------------ESKK 406
+ DS +DDSGEE ++ G E+E A++ +S +
Sbjct: 582 ENANDS------------SDDSGEETDESFNPGEEEEDVAEEFDSNASASSSSNEGDSDR 629
Query: 407 ESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGI 466
+ K K ++D K + KK KDPNAPKR MS ++ + RE IK +PGI
Sbjct: 630 DEKKRKQLKKAKMAKDRKSRKKPVEVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI 689
Query: 467 AFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
+ TD+ + GE WK MS E++E ++ KA ++ Y+ + Y+
Sbjct: 690 SITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAMKEYE 732
>gi|410351023|gb|JAA42115.1| structure specific recognition protein 1 [Pan troglodytes]
Length = 712
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 183/525 (34%), Positives = 284/525 (54%), Gaps = 42/525 (8%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F +G + FE+ L++VSQ GKN+V LEFH +D + + SLME+ F++P +
Sbjct: 118 LLSFDIGDQPVFEIPLSNVSQCT-TGKNEVTLEFHQND----DAEVSLMEVRFYVPPTQE 172
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P + F ++S ADV +A+ F + LTPRGRY + ++ +FL L G
Sbjct: 173 DGVD-----PVEAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F D + L
Sbjct: 228 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
M+EE + +++ +L + G ++E+ + +++ L KIT PG F+ + S KA
Sbjct: 288 NMNEEEVEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP I +EI +V F R G + FD I K ++ F
Sbjct: 348 SSGLLYPLERGFIYVHKPPVHIRFDEISFVNFAR---GTTTTRSFDFEIETKQGTQYTFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQE---DDDDAVDPHLERIKNEAG 357
+I+R EY LFDF++ K L I N G + +G+ E D+D D +LER+K E
Sbjct: 405 SIEREEYGKLFDFVNAKKLNIKNRGLKEKKEGMNPSYDEYADSDEDQHDAYLERMKEEGK 464
Query: 358 GDESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKK--------------E 403
E + DS +DDSGEE ++ G E+E A++ +
Sbjct: 465 IREENANDS------------SDDSGEETDESFNPGEEEEDVAEEFDSNASASSSSNEGD 512
Query: 404 SKKESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSN 463
S ++ K K ++D K + KK KDPNAPKR MS ++ + RE IK +
Sbjct: 513 SDRDEKKRKQLKKAKMAKDRKSRKKPVEVKKGKDPNAPKRPMSAYMLWLNASREKIKSDH 572
Query: 464 PGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGY 508
PGI+ TD+ + GE WK MS E++E ++ KA ++ Y+ + Y
Sbjct: 573 PGISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARRDYEKAMKEY 617
>gi|301774634|ref|XP_002922750.1| PREDICTED: FACT complex subunit SSRP1-like [Ailuropoda melanoleuca]
Length = 709
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 181/523 (34%), Positives = 283/523 (54%), Gaps = 39/523 (7%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F +G + FE+ L++VSQ GKN+V LEFH +D + + SLME+ F++P +
Sbjct: 118 LLSFDIGDQPVFEIPLSNVSQCT-TGKNEVTLEFHQND----DAEVSLMEVRFYVPPTQE 172
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P + F ++S ADV +A+ F + LTPRGRY + ++ +FL L G
Sbjct: 173 DGVD-----PVEAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F D + L
Sbjct: 228 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
M+EE + +++ +L + G ++E+ + +++ L KIT PG F+ + S KA
Sbjct: 288 NMNEEEVEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP I +EI +V F R G + FD I K ++ F
Sbjct: 348 SSGLLYPLERGFIYVHKPPVHIRFDEISFVNFAR---GTTTTRSFDFEIETKQGTQYTFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
+I+R EY LFDF++ K L I N G + + + D+D D +LER+K E E
Sbjct: 405 SIEREEYGKLFDFVNAKKLNIKNRGLKEGMNPSYDEYADSDEDQHDAYLERMKEEGKIRE 464
Query: 361 SDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKK--------------ESKK 406
+ DS +DDSGEE ++ G E+E A++ +S +
Sbjct: 465 ENANDS------------SDDSGEETDESFNPGEEEEDVAEEFDSNASASSSSNEGDSDR 512
Query: 407 ESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGI 466
+ K K ++D K + KK KDPNAPKR MS ++ + RE IK +PGI
Sbjct: 513 DEKKRKQLKKAKMAKDRKSRKKPVEVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI 572
Query: 467 AFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
+ TD+ + GE WK MS E++E ++ KA ++ Y+ + Y+
Sbjct: 573 SITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAMKEYE 615
>gi|410973949|ref|XP_003993410.1| PREDICTED: FACT complex subunit SSRP1 [Felis catus]
Length = 709
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 181/523 (34%), Positives = 283/523 (54%), Gaps = 39/523 (7%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F +G + FE+ L++VSQ GKN+V LEFH +D + + SLME+ F++P +
Sbjct: 118 LLSFDIGDQPVFEIPLSNVSQCT-TGKNEVTLEFHQND----DAEVSLMEVRFYVPPTQE 172
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P + F ++S ADV +A+ F + LTPRGRY + ++ +FL L G
Sbjct: 173 DGVD-----PVEAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F D + L
Sbjct: 228 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
M+EE + +++ +L + G ++E+ + +++ L KIT PG F+ + S KA
Sbjct: 288 NMNEEEVEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP I +EI +V F R G + FD I K ++ F
Sbjct: 348 SSGLLYPLERGFIYVHKPPVHIRFDEISFVNFAR---GTTTTRSFDFEIETKQGTQYTFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
+I+R EY LFDF++ K L I N G + + + D+D D +LER+K E E
Sbjct: 405 SIEREEYGKLFDFVNAKKLNIKNRGLKEGMNPSYDEYADSDEDQHDAYLERMKEEGKIRE 464
Query: 361 SDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKK--------------ESKK 406
+ DS +DDSGEE ++ G E+E A++ +S +
Sbjct: 465 ENANDS------------SDDSGEETDESFNPGEEEEDVAEEFDSNASASSSSNEGDSDR 512
Query: 407 ESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGI 466
+ K K ++D K + KK KDPNAPKR MS ++ + RE IK +PGI
Sbjct: 513 DEKKRKQLKKAKMAKDRKSRKKPVEVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI 572
Query: 467 AFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
+ TD+ + GE WK MS E++E ++ KA ++ Y+ + Y+
Sbjct: 573 SITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAMKEYE 615
>gi|383872505|ref|NP_001244820.1| FACT complex subunit SSRP1 [Macaca mulatta]
gi|402893460|ref|XP_003909913.1| PREDICTED: FACT complex subunit SSRP1 [Papio anubis]
gi|355566511|gb|EHH22890.1| Facilitates chromatin transcription complex subunit SSRP1 [Macaca
mulatta]
gi|355752113|gb|EHH56233.1| Facilitates chromatin transcription complex subunit SSRP1 [Macaca
fascicularis]
gi|380784229|gb|AFE63990.1| FACT complex subunit SSRP1 [Macaca mulatta]
gi|383421069|gb|AFH33748.1| FACT complex subunit SSRP1 [Macaca mulatta]
gi|384949008|gb|AFI38109.1| FACT complex subunit SSRP1 [Macaca mulatta]
Length = 709
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 181/523 (34%), Positives = 283/523 (54%), Gaps = 39/523 (7%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F +G + FE+ L++VSQ GKN+V LEFH +D + + SLME+ F++P +
Sbjct: 118 LLSFDIGDQPVFEIPLSNVSQCT-TGKNEVTLEFHQND----DAEVSLMEVRFYVPPTQE 172
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P + F ++S ADV +A+ F + LTPRGRY + ++ +FL L G
Sbjct: 173 DGVD-----PVEAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F D + L
Sbjct: 228 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
M+EE + +++ +L + G ++E+ + +++ L KIT PG F+ + S KA
Sbjct: 288 NMNEEEVEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP I +EI +V F R G + FD I K ++ F
Sbjct: 348 SSGLLYPLERGFIYVHKPPVHIRFDEISFVNFAR---GTTTTRSFDFEIETKQGTQYTFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
+I+R EY LFDF++ K L I N G + + + D+D D +LER+K E E
Sbjct: 405 SIEREEYGKLFDFVNAKKLNIKNRGLKEGMNPSYDEYADSDEDQHDAYLERMKEEGKIRE 464
Query: 361 SDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKK--------------ESKK 406
+ DS +DDSGEE ++ G E+E A++ +S +
Sbjct: 465 ENANDS------------SDDSGEETDESFNPGEEEEDVAEEFDSNASASSSSNEGDSDR 512
Query: 407 ESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGI 466
+ K K ++D K + KK KDPNAPKR MS ++ + RE IK +PGI
Sbjct: 513 DEKKRKQLKKAKMAKDRKSRKKPVEVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI 572
Query: 467 AFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
+ TD+ + GE WK MS E++E ++ KA ++ Y+ + Y+
Sbjct: 573 SITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAMKEYE 615
>gi|344299407|ref|XP_003421377.1| PREDICTED: FACT complex subunit SSRP1 [Loxodonta africana]
Length = 709
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 181/523 (34%), Positives = 283/523 (54%), Gaps = 39/523 (7%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F +G + FE+ L++VSQ GKN+V LEFH +D + + SLME+ F++P +
Sbjct: 118 LLSFDIGDQPVFEIPLSNVSQCT-TGKNEVTLEFHQND----DAEVSLMEVRFYVPPTQE 172
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P + F ++S ADV +A+ F + LTPRGRY + ++ +FL L G
Sbjct: 173 DGVD-----PVEAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F D + L
Sbjct: 228 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
M+EE + +++ +L + G ++E+ + +++ L KIT PG F+ + S KA
Sbjct: 288 NMNEEEVEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP I +EI +V F R G + FD I K ++ F
Sbjct: 348 SSGLLYPLERGFIYVHKPPVHIRFDEISFVNFAR---GTTTTRSFDFEIETKQGTQYTFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
+I+R EY LFDF++ K L I N G + + + D+D D +LER+K E E
Sbjct: 405 SIEREEYGKLFDFVNAKKLNIKNRGLKEGMNPSYDEYADSDEDQHDAYLERMKEEGKIRE 464
Query: 361 SDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKK--------------ESKK 406
+ DS +DDSGEE ++ G E+E A++ +S +
Sbjct: 465 ENANDS------------SDDSGEETDESFNPGEEEEDVAEEFDSNASASSSSNEGDSDR 512
Query: 407 ESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGI 466
+ K K ++D K + KK KDPNAPKR MS ++ + RE IK +PGI
Sbjct: 513 DEKKRKQLKKAKMAKDRKSRKKPVEVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI 572
Query: 467 AFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
+ TD+ + GE WK MS E++E ++ KA ++ Y+ + Y+
Sbjct: 573 SITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAMKEYE 615
>gi|296218242|ref|XP_002755324.1| PREDICTED: FACT complex subunit SSRP1 [Callithrix jacchus]
Length = 709
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 181/523 (34%), Positives = 283/523 (54%), Gaps = 39/523 (7%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F +G + FE+ L++VSQ GKN+V LEFH +D + + SLME+ F++P +
Sbjct: 118 LLSFDIGDQPVFEIPLSNVSQCT-TGKNEVTLEFHQND----DAEVSLMEVRFYVPPTQE 172
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P + F ++S ADV +A+ F + LTPRGRY + ++ +FL L G
Sbjct: 173 DGVD-----PVEAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F D + L
Sbjct: 228 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
M+EE + +++ +L + G ++E+ + +++ L KIT PG F+ + S KA
Sbjct: 288 NMNEEEVEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP I +EI +V F R G + FD I K ++ F
Sbjct: 348 SSGLLYPLERGFIYVHKPPVHIRFDEISFVNFAR---GTTTTRSFDFEIETKQGTQYTFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
+I+R EY LFDF++ K L I N G + + + D+D D +LER+K E E
Sbjct: 405 SIEREEYGKLFDFVNAKKLNIKNRGLKEGMNPSYDEYADSDEDQHDAYLERMKEEGKIRE 464
Query: 361 SDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKK--------------ESKK 406
+ DS +DDSGEE ++ G E+E A++ +S +
Sbjct: 465 ENANDS------------SDDSGEETDESFNPGEEEEDVAEEFDSNASASSSSNEGDSDR 512
Query: 407 ESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGI 466
+ K K ++D K + KK KDPNAPKR MS ++ + RE IK +PGI
Sbjct: 513 DEKKRKQLKKAKMAKDRKSRKKPVEVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI 572
Query: 467 AFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
+ TD+ + GE WK MS E++E ++ KA ++ Y+ + Y+
Sbjct: 573 SITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAMKEYE 615
>gi|345783817|ref|XP_859953.2| PREDICTED: FACT complex subunit SSRP1 isoform 4 [Canis lupus
familiaris]
Length = 711
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 176/513 (34%), Positives = 279/513 (54%), Gaps = 17/513 (3%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F +G + FE+ L++VSQ GKN+V LEFH +D + + SLME+ F++P +
Sbjct: 118 LLSFDIGDQPVFEIPLSNVSQCT-TGKNEVTLEFHQND----DAEVSLMEVRFYVPPTQE 172
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P + F ++S ADV +A+ F + LTPRGRY + ++ +FL L G
Sbjct: 173 DGVD-----PVEAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F D + L
Sbjct: 228 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
M+EE + +++ +L + G ++E+ + +++ L KIT PG F+ + S KA
Sbjct: 288 NMNEEEVEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP I +EI +V F R G + FD I K ++ F
Sbjct: 348 SSGLLYPLERGFIYVHKPPVHIRFDEISFVNFAR---GTTTTRSFDFEIETKQGTQYTFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
+I+R EY LFDF++ K L I N G + + + D+D D +LER+K E E
Sbjct: 405 SIEREEYGKLFDFVNAKKLNIKNRGLKEGMNPSYDEYADSDEDQHDAYLERMKEEGKIRE 464
Query: 361 SDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSSVKASTSKKKS 420
+ DS + ++ G G E D +E + ++ +S + + K
Sbjct: 465 ENANDSSDDSGEETGRLALAVPGHEGRDLAEEFDSNASASSSSNEGDSDRDEKKRKQLKK 524
Query: 421 RDGDEDGKKKKQ----KKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLG 476
+D K +K+ KK KDPNAPKR MS ++ + RE IK +PGI+ TD+ + G
Sbjct: 525 AKMAKDRKSRKKPVEVKKGKDPNAPKRPMSAYMLWLNASREKIKADHPGISITDLSKKAG 584
Query: 477 ERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
E WK MS E++E ++ KA ++ Y+ + Y+
Sbjct: 585 EIWKGMSKEKKEEWDRKAEDARREYEKAMKEYE 617
>gi|297688746|ref|XP_002821837.1| PREDICTED: FACT complex subunit SSRP1 isoform 2 [Pongo abelii]
Length = 709
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 181/523 (34%), Positives = 283/523 (54%), Gaps = 39/523 (7%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F +G + FE+ L++VSQ GKN+V LEFH +D + + SLME+ F++P +
Sbjct: 118 LLSFDIGDQPVFEIPLSNVSQCT-TGKNEVTLEFHQND----DAEVSLMEVRFYVPPTQE 172
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P + F ++S ADV +A+ F + LTPRGRY + ++ +FL L G
Sbjct: 173 DGVD-----PVEAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F D + L
Sbjct: 228 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
M+EE + +++ +L + G ++E+ + +++ L KIT PG F+ + S KA
Sbjct: 288 NMNEEEVEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP I +EI +V F R G + FD I K ++ F
Sbjct: 348 SSGLLYPLERGFIYVHKPPVHIRFDEISFVNFAR---GTTTTRSFDFEIETKQGTQYTFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
+I+R EY LFDF++ K L I N G + + + D+D D +LER+K E E
Sbjct: 405 SIEREEYGKLFDFVNAKKLNIKNRGLKEGMNPSYDEYADSDEDQHDAYLERMKEEGKIRE 464
Query: 361 SDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKK--------------ESKK 406
+ DS +DDSGEE ++ G E+E A++ +S +
Sbjct: 465 ENANDS------------SDDSGEETDESFNPGEEEEDVAEEFDSNASASSSSNEGDSDR 512
Query: 407 ESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGI 466
+ K K ++D K + KK KDPNAPKR MS ++ + RE IK +PGI
Sbjct: 513 DEKKRKQLKKAKMAKDRKSRKKPVEVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI 572
Query: 467 AFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
+ TD+ + GE WK MS E++E ++ KA ++ Y+ + Y+
Sbjct: 573 SITDLSKKAGEIWKGMSKEKKEEWDRKAEDARRDYEKAMKEYE 615
>gi|4507241|ref|NP_003137.1| FACT complex subunit SSRP1 [Homo sapiens]
gi|397512296|ref|XP_003826485.1| PREDICTED: FACT complex subunit SSRP1 [Pan paniscus]
gi|426368405|ref|XP_004051198.1| PREDICTED: FACT complex subunit SSRP1 [Gorilla gorilla gorilla]
gi|730840|sp|Q08945.1|SSRP1_HUMAN RecName: Full=FACT complex subunit SSRP1; AltName:
Full=Chromatin-specific transcription elongation factor
80 kDa subunit; AltName: Full=Facilitates chromatin
transcription complex 80 kDa subunit; Short=FACT 80 kDa
subunit; Short=FACTp80; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=Recombination signal sequence recognition protein
1; AltName: Full=Structure-specific recognition protein
1; Short=hSSRP1; AltName: Full=T160
gi|184242|gb|AAA58660.1| high mobility group box [Homo sapiens]
gi|13477285|gb|AAH05116.1| Structure specific recognition protein 1 [Homo sapiens]
gi|119594140|gb|EAW73734.1| structure specific recognition protein 1, isoform CRA_a [Homo
sapiens]
gi|119594141|gb|EAW73735.1| structure specific recognition protein 1, isoform CRA_a [Homo
sapiens]
gi|123993967|gb|ABM84585.1| structure specific recognition protein 1 [synthetic construct]
gi|123998313|gb|ABM86758.1| structure specific recognition protein 1 [synthetic construct]
gi|410226712|gb|JAA10575.1| structure specific recognition protein 1 [Pan troglodytes]
gi|410226714|gb|JAA10576.1| structure specific recognition protein 1 [Pan troglodytes]
gi|410262712|gb|JAA19322.1| structure specific recognition protein 1 [Pan troglodytes]
gi|410262714|gb|JAA19323.1| structure specific recognition protein 1 [Pan troglodytes]
gi|410305268|gb|JAA31234.1| structure specific recognition protein 1 [Pan troglodytes]
gi|410305270|gb|JAA31235.1| structure specific recognition protein 1 [Pan troglodytes]
gi|410351021|gb|JAA42114.1| structure specific recognition protein 1 [Pan troglodytes]
gi|410351025|gb|JAA42116.1| structure specific recognition protein 1 [Pan troglodytes]
Length = 709
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 181/523 (34%), Positives = 283/523 (54%), Gaps = 39/523 (7%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F +G + FE+ L++VSQ GKN+V LEFH +D + + SLME+ F++P +
Sbjct: 118 LLSFDIGDQPVFEIPLSNVSQCT-TGKNEVTLEFHQND----DAEVSLMEVRFYVPPTQE 172
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P + F ++S ADV +A+ F + LTPRGRY + ++ +FL L G
Sbjct: 173 DGVD-----PVEAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F D + L
Sbjct: 228 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
M+EE + +++ +L + G ++E+ + +++ L KIT PG F+ + S KA
Sbjct: 288 NMNEEEVEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP I +EI +V F R G + FD I K ++ F
Sbjct: 348 SSGLLYPLERGFIYVHKPPVHIRFDEISFVNFAR---GTTTTRSFDFEIETKQGTQYTFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
+I+R EY LFDF++ K L I N G + + + D+D D +LER+K E E
Sbjct: 405 SIEREEYGKLFDFVNAKKLNIKNRGLKEGMNPSYDEYADSDEDQHDAYLERMKEEGKIRE 464
Query: 361 SDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKK--------------ESKK 406
+ DS +DDSGEE ++ G E+E A++ +S +
Sbjct: 465 ENANDS------------SDDSGEETDESFNPGEEEEDVAEEFDSNASASSSSNEGDSDR 512
Query: 407 ESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGI 466
+ K K ++D K + KK KDPNAPKR MS ++ + RE IK +PGI
Sbjct: 513 DEKKRKQLKKAKMAKDRKSRKKPVEVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI 572
Query: 467 AFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
+ TD+ + GE WK MS E++E ++ KA ++ Y+ + Y+
Sbjct: 573 SITDLSKKAGEIWKGMSKEKKEEWDRKAEDARRDYEKAMKEYE 615
>gi|332252411|ref|XP_003275348.1| PREDICTED: FACT complex subunit SSRP1 [Nomascus leucogenys]
Length = 709
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 181/523 (34%), Positives = 283/523 (54%), Gaps = 39/523 (7%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F +G + FE+ L++VSQ GKN+V LEFH +D + + SLME+ F++P +
Sbjct: 118 LLSFDIGDQPVFEIPLSNVSQCT-TGKNEVTLEFHQND----DAEVSLMEVRFYVPPTQE 172
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P + F ++S ADV +A+ F + LTPRGRY + ++ +FL L G
Sbjct: 173 DGVD-----PVEAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F D + L
Sbjct: 228 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
M+EE + +++ +L + G ++E+ + +++ L KIT PG F+ + S KA
Sbjct: 288 NMNEEEVEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP I +EI +V F R G + FD I K ++ F
Sbjct: 348 SSGLLYPLERGFIYVHKPPVHIRFDEISFVNFAR---GTTTTRSFDFEIETKQGTQYTFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
+I+R EY LFDF++ K L I N G + + + D+D D +LER+K E E
Sbjct: 405 SIEREEYGKLFDFVNAKKLNIKNRGLKEGMNPSYDEYADSDEDQHDAYLERMKEEGKIRE 464
Query: 361 SDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKK--------------ESKK 406
+ DS +DDSGEE ++ G E+E A++ +S +
Sbjct: 465 ENANDS------------SDDSGEETDESFNPGEEEEDVAEEFDSNASASSSSNEGDSDR 512
Query: 407 ESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGI 466
+ K K ++D K + KK KDPNAPKR MS ++ + RE IK +PGI
Sbjct: 513 DEKKRKQLKKAKMAKDRKSRKKPVEVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI 572
Query: 467 AFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
+ TD+ + GE WK MS E++E ++ KA ++ Y+ + Y+
Sbjct: 573 SITDLSKKAGEIWKGMSKEKKEEWDRKAEDARRDYEKAMKEYE 615
>gi|281343903|gb|EFB19487.1| hypothetical protein PANDA_011742 [Ailuropoda melanoleuca]
Length = 607
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 181/522 (34%), Positives = 282/522 (54%), Gaps = 39/522 (7%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F +G + FE+ L++VSQ GKN+V LEFH +D + + SLME+ F++P +
Sbjct: 101 LLSFDIGDQPVFEIPLSNVSQCT-TGKNEVTLEFHQND----DAEVSLMEVRFYVPPTQE 155
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P + F ++S ADV +A+ F + LTPRGRY + ++ +FL L G
Sbjct: 156 DGVD-----PVEAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHG 210
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F D + L
Sbjct: 211 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTL 270
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
M+EE + +++ +L + G ++E+ + +++ L KIT PG F+ + S KA
Sbjct: 271 NMNEEEVEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKA 330
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP I +EI +V F R G + FD I K ++ F
Sbjct: 331 SSGLLYPLERGFIYVHKPPVHIRFDEISFVNFAR---GTTTTRSFDFEIETKQGTQYTFS 387
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
+I+R EY LFDF++ K L I N G + + + D+D D +LER+K E E
Sbjct: 388 SIEREEYGKLFDFVNAKKLNIKNRGLKEGMNPSYDEYADSDEDQHDAYLERMKEEGKIRE 447
Query: 361 SDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKK--------------ESKK 406
+ DS +DDSGEE ++ G E+E A++ +S +
Sbjct: 448 ENANDS------------SDDSGEETDESFNPGEEEEDVAEEFDSNASASSSSNEGDSDR 495
Query: 407 ESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGI 466
+ K K ++D K + KK KDPNAPKR MS ++ + RE IK +PGI
Sbjct: 496 DEKKRKQLKKAKMAKDRKSRKKPVEVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI 555
Query: 467 AFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGY 508
+ TD+ + GE WK MS E++E ++ KA ++ Y+ + Y
Sbjct: 556 SITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAMKEY 597
>gi|54020668|ref|NP_112383.1| FACT complex subunit SSRP1 [Rattus norvegicus]
gi|83305804|sp|Q04931.2|SSRP1_RAT RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=Recombination signal sequence recognition protein
1; AltName: Full=Structure-specific recognition protein
1; AltName: Full=T160
gi|53734496|gb|AAH83588.1| Structure specific recognition protein 1 [Rattus norvegicus]
gi|149022436|gb|EDL79330.1| structure specific recognition protein 1, isoform CRA_a [Rattus
norvegicus]
gi|149022437|gb|EDL79331.1| structure specific recognition protein 1, isoform CRA_a [Rattus
norvegicus]
Length = 709
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 187/521 (35%), Positives = 283/521 (54%), Gaps = 35/521 (6%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F +G + FE+ L++VSQ GKN+V LEFH +D SLME+ F++P +
Sbjct: 118 LLSFDIGDQPVFEIPLSNVSQCT-TGKNEVTLEFHQNDDAEV----SLMEVRFYVPPTQE 172
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P + F ++S ADV +A+ F + LTPRGRY + ++ +FL L G
Sbjct: 173 DGVD-----PVEAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F D + L
Sbjct: 228 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
M+EE + +++ +L + G ++E+ + +++ L KIT PG F+ + S KA
Sbjct: 288 NMNEEEVEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP I +EI +V F R G + FD I K ++ F
Sbjct: 348 SSGLLYPLERGFIYVHKPPVHIRFDEISFVNFAR---GTTTTRSFDFEIETKQGTQYTFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
+I+R EY LFDF++ K L I N G + + + D+D D +LER+K E E
Sbjct: 405 SIEREEYGKLFDFVNAKKLNIKNRGLKEGINPGYDDYADSDEDQHDAYLERMKEEGKIRE 464
Query: 361 SDEEDSDFVADKDDGGSPTDDSGEE-----------DSDASESGGEKEKPAKKESKKESS 409
+ DS DD G TD+S DS+AS S E + +E KK
Sbjct: 465 ENANDS-----SDDSGEETDESFNPGEEEEDVAEEFDSNASASSSSNEGDSDREEKKRKQ 519
Query: 410 SVKASTSK-KKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAF 468
+A +K +KSR K + KK KDPNAPKR MS ++ + RE IK +PGI+
Sbjct: 520 LKRAKMAKDRKSRK-----KSSEGKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISI 574
Query: 469 TDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
TD+ + GE WK MS E++E ++ KA ++ Y+ + Y+
Sbjct: 575 TDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAMKEYE 615
>gi|148226156|ref|NP_001084164.1| FACT complex subunit SSRP1 [Xenopus laevis]
gi|82175412|sp|Q9W602.1|SSRP1_XENLA RecName: Full=FACT complex subunit SSRP1; AltName: Full=DNA
unwinding factor 87 kDa subunit; Short=DUF87; AltName:
Full=Facilitates chromatin transcription complex subunit
ssrp1; AltName: Full=Structure-specific recognition
protein 1
gi|4586285|dbj|BAA76333.1| DUF87 [Xenopus laevis]
Length = 693
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 185/524 (35%), Positives = 282/524 (53%), Gaps = 35/524 (6%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F +G + AFE+ L++VSQ GKN+V LEFH +D + SLMEI F++P +
Sbjct: 118 LLSFDIGDQPAFELPLSNVSQCT-TGKNEVTLEFHQNDDSEV----SLMEIRFYVPPTQ- 171
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
D+ + F ++S ADV +AV F + LTPRGRY + ++ +FL L G
Sbjct: 172 ----DDGGDSVEAFAQNVLSKADVIQATGDAVCIFRELQCLTPRGRYDIRIYPTFLHLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F D + L
Sbjct: 228 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDMTLTL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
MSEE + +++ KL+ S G ++E+ + +++ L KIT PG F + S KA
Sbjct: 288 NMSEEEVERRFEGKLKKSMSGCLYEMVSRVMKALVNRKITVPGNFLGHSGSQCITCSYKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP I +EI V F R G + FD I K ++ F
Sbjct: 348 SSGLLYPLERGFIYVHKPPVHIRFDEITCVNFAR---GTTTTRSFDFEIETKQGSQYTFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
+I+R EY LFDF++ K L I N G + + D+D D +LER+K E E
Sbjct: 405 SIEREEYGKLFDFVNAKKLSIKNRGLKEGMKPAYDDYADSDEDQHDAYLERMKEEGKIRE 464
Query: 361 SDEEDSDFVADKDDGGSPTDDS---------GEEDSDASESGGEKEKPAKKESKKESSSV 411
+ AD D+ G TD+S E+ D++ S + ++ K+ +
Sbjct: 465 N--------ADSDESGDETDESFNPGEEEEEVAEEFDSNPSASSSSADSDDDTDKKKDAK 516
Query: 412 KASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDV 471
+A K+K + KK + KK KDP APKR MS ++ + RE IK NPGI+ TD+
Sbjct: 517 RAKIVKQK-----KPRKKPEAKKTKDPGAPKRPMSAYMLWLNASREKIKSENPGISITDL 571
Query: 472 GRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYKNPKPMD 515
+ GE WK MS +++E ++ +A K+ Y+ + Y P +
Sbjct: 572 SKKAGEIWKNMSRDKKEEWDRRAEEAKRDYEKAMKEYNTSAPTE 615
>gi|449681405|ref|XP_002159252.2| PREDICTED: FACT complex subunit SSRP1-like [Hydra magnipapillata]
Length = 774
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 190/531 (35%), Positives = 288/531 (54%), Gaps = 59/531 (11%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+++F V K AFE+ L DVSQ GKN+V +EFH +D + K LME+ F +P +
Sbjct: 118 VMSFEVENKAAFEIPLQDVSQATT-GKNEVTIEFHRND----DAKVQLMEMRFFVPEKDE 172
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
+ + F D+IMS AD+ +A+VTF+ +A LTPRGRYS+ ++ FL+L G
Sbjct: 173 E-------DAVKNFHDQIMSKADIIQATGDAIVTFDEVACLTPRGRYSIRVYPKFLQLHG 225
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI +++VRLFLLP +Q F V+++DPP+R+G T YP ++LQFE D + EL
Sbjct: 226 KTYDYKIPRTAIVRLFLLPHQDQRFMFFVISMDPPLRQGNTRYPFLILQFERDEEMSCEL 285
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
++EE + KY +KL G + E+ + +L+ + KIT PG F+S A+ S KA
Sbjct: 286 NLTEEEIENKYNNKLTRKMSGAVFEIVSRVLKEICQQKITVPGSFKSKTGTSAISCSYKA 345
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
+G+LYPLEK F F+ KPP I +EI V F R + G FD + L +F
Sbjct: 346 SNGLLYPLEKGFMFVHKPPVYIRFDEISSVNFARGSTTGRT---FDFEMDLNNGTVVVFS 402
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
++ ++EY LFDF++ K L+I N + +++ + D+ D +L+R+K E G E
Sbjct: 403 SLPKDEYTPLFDFVNQKKLRIKNKVASSGGSNLDQMIESNPDEH-DAYLQRMKAE--GAE 459
Query: 361 SDEEDSDFVA-----------------------DKDDGGSPTDDSGEEDSDASESGGEKE 397
D+E ++ + D D G S D+ E +S+A K
Sbjct: 460 RDDEANEGDSESESEDEDFNPANEKVESVREEFDSDVGNSTDDEDNESNSEA------KN 513
Query: 398 KPAKKESKKESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERE 457
K K E KK +K ++ S +KKKKD NAPKR MS F+ + RE
Sbjct: 514 KKRKSEPKKNEPKIKRPKKEEGS----------SKKKKKDENAPKRPMSAFMLYMNEVRE 563
Query: 458 NIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGY 508
IK NPGIAFTD+ + GE+WK ++ ++ +E+ A+ K +Y + + Y
Sbjct: 564 KIKADNPGIAFTDIAKKGGEQWKTLT--DKTKWENMAKEAKNKYTIDFAAY 612
>gi|8170740|gb|AAB19500.2| HMG1-related DNA-binding protein [Mus sp.]
Length = 708
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 184/520 (35%), Positives = 282/520 (54%), Gaps = 35/520 (6%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F +G + FE+ L++VS Q + +V LEFH +D + + SLME+ F++P +
Sbjct: 118 LLSFDIGDQPVFEIPLSNVSSVP-QARIEVTLEFHQND----DPEVSLMEVRFYVPPTQE 172
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P + F ++S ADV +A+ F + LTPRGRY + ++ +FL L G
Sbjct: 173 DGVD-----PVEAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F D + L
Sbjct: 228 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
M+EE + +++ +L + G ++E+ + +++ L KIT PG F+ + S KA
Sbjct: 288 NMNEEEVEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP I +EI +V F R G + FD I K ++ F
Sbjct: 348 SSGLLYPLERGFIYVHKPPVHIRFDEISFVNFAR---GTTTTRSFDFEIETKQGTQYTFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
+I+R EY LFDF++ K L I N G + + + D+D D +LER+K E E
Sbjct: 405 SIEREEYGKLFDFVNAKKLNIKNRGLKEGINPGYDDYADSDEDQHDAYLERMKEEGKIRE 464
Query: 361 SDEEDSDFVADKDDGGSPTDDSGEE-----------DSDASESGGEKEKPAKKESKKESS 409
+ DS DD G TD+S DS+AS S E + +E KK
Sbjct: 465 ENANDSS-----DDSGEETDESFNPGEEEEDVAEEFDSNASASSSSNEGDSDREEKKREQ 519
Query: 410 SVKASTSK-KKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAF 468
+A +K +KSR K + KK KDPNAPKR MS ++ + RE IK +PGI+
Sbjct: 520 LKRAKMAKDRKSRR-----KSSEAKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISI 574
Query: 469 TDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGY 508
TD+ + GE WK MS E++E ++ KA ++ Y+ + Y
Sbjct: 575 TDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAMKEY 614
>gi|223649078|gb|ACN11297.1| FACT complex subunit SSRP1 [Salmo salar]
Length = 711
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 188/518 (36%), Positives = 286/518 (55%), Gaps = 33/518 (6%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F V FE+ LA VSQ GKN+V LEFH +D + + SLME+ F++P
Sbjct: 118 LLSFDVNDSSVFEIPLASVSQCAT-GKNEVTLEFHQND----DAEVSLMEVRFYVPPG-- 170
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
DE P + F + S ADV +AV F+ + LTPRGRY + ++ +FL L G
Sbjct: 171 --TADEGTDPVEAFAQNVRSKADVIQATGDAVCVFKELQCLTPRGRYDILIYPAFLHLHG 228
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F + ++ L
Sbjct: 229 KTFDYKIPYTTVLRLFLLPSKDQRQMFFVISLDPPIKQGQTRYHFLILHFSKEEELKLTL 288
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDG-YAVKSSLK 239
MSEE + +Y+ KL + G ++E+ + +++ L KIT PG F+ G + S K
Sbjct: 289 NMSEEEVEKRYEGKLSKNMSGSLYEMVSRVMKALVNRKITVPGNFQGNTPGAQCITCSYK 348
Query: 240 AEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLF 299
A+ G+LYPLE+ F ++ KPP + EEI V F R G + FD + K + F
Sbjct: 349 AQSGLLYPLERGFIYVHKPPVHLRFEEISSVNFAR---GTTTTRSFDFEVETKQGNQFTF 405
Query: 300 RNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEA--- 356
+I+R EY LFDF++ K L I N G + + + + DDD D +LER+K E
Sbjct: 406 SSIEREEYGKLFDFVNAKKLHIKNRGFKEAKNNEYS---DSDDDQHDAYLERMKAEGKIR 462
Query: 357 ----GGDESDEE-DSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSSV 411
G ++SDEE D F + G +D + E DS+ASES + + + +
Sbjct: 463 EEGDGSNDSDEETDESF-----NPGEESDVAEEYDSNASES----DSGSGGDGSDDEGKK 513
Query: 412 KASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDV 471
K K K ++ K +++KK+KD NAPKR MS ++ + RE IK NPGI+ T++
Sbjct: 514 KKPAKKAKVVKEKKERKPRREKKQKDTNAPKRPMSSYMLWLNSSRERIKSENPGISITEI 573
Query: 472 GRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
+ GE WK++ E++E ++ KA KK Y+ + Y+
Sbjct: 574 SKKAGEMWKQIGKEDKEEWDGKAEEAKKNYEKAMKEYR 611
>gi|60552474|gb|AAH91486.1| SSRP1 protein, partial [Homo sapiens]
Length = 633
Score = 301 bits (770), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 181/523 (34%), Positives = 283/523 (54%), Gaps = 39/523 (7%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F +G + FE+ L++VSQ GKN+V LEFH +D + + SLME+ F++P +
Sbjct: 118 LLSFDIGDQPVFEIPLSNVSQCT-TGKNEVTLEFHQND----DAEVSLMEVRFYVPPTQE 172
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P + F ++S ADV +A+ F + LTPRGRY + ++ +FL L G
Sbjct: 173 DGVD-----PVEAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F D + L
Sbjct: 228 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
M+EE + +++ +L + G ++E+ + +++ L KIT PG F+ + S KA
Sbjct: 288 NMNEEEVEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP I +EI +V F R G + FD I K ++ F
Sbjct: 348 SSGLLYPLERGFIYVHKPPVHIRFDEISFVNFAR---GTTTTRSFDFEIETKQGTQYTFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
+I+R EY LFDF++ K L I N G + + + D+D D +LER+K E E
Sbjct: 405 SIEREEYGKLFDFVNAKKLNIKNRGLKEGMNPSYDEYADSDEDQHDAYLERMKEEGKIRE 464
Query: 361 SDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKK--------------ESKK 406
+ DS +DDSGEE ++ G E+E A++ +S +
Sbjct: 465 ENANDS------------SDDSGEETDESFNPGEEEEDVAEEFDSNASASSSSNEGDSDR 512
Query: 407 ESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGI 466
+ K K ++D K + KK KDPNAPKR MS ++ + RE IK +PGI
Sbjct: 513 DEKKRKQLKKAKMAKDRKSRKKPVEVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI 572
Query: 467 AFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
+ TD+ + GE WK MS E++E ++ KA ++ Y+ + Y+
Sbjct: 573 SITDLSKKAGEIWKGMSKEKKEEWDRKAEDARRDYEKAMKEYE 615
>gi|417404085|gb|JAA48818.1| Putative nucleosome-binding factor spn pob3 subunit [Desmodus
rotundus]
Length = 709
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 180/523 (34%), Positives = 283/523 (54%), Gaps = 39/523 (7%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F +G + FE+ L++VSQ GKN+V LEFH +D + + SLME+ F++P +
Sbjct: 118 LLSFDIGDQPVFEIPLSNVSQCT-TGKNEVTLEFHQND----DAEVSLMEVRFYVPPTQE 172
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P + F ++S ADV +A+ F + LTPRGRY + ++ +FL L G
Sbjct: 173 DGVD-----PVEAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F D + L
Sbjct: 228 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
M+EE + +++ +L + G ++E+ + +++ L KIT PG F+ + S KA
Sbjct: 288 NMNEEEVEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP I +EI +V F R G + FD I K ++ F
Sbjct: 348 SSGLLYPLERGFIYVHKPPVHIRFDEISFVNFAR---GTTTTRSFDFEIETKQGTQYTFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
+I+R EY LFDF++ K L I N G + + + D+D D +LER+K E E
Sbjct: 405 SIEREEYGKLFDFVNAKKLNIKNRGLKEGMNPSYDDYADSDEDQHDAYLERMKEEGKIRE 464
Query: 361 SDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKK--------------ESKK 406
+ DS +DDSGEE ++ G E+E A++ +S +
Sbjct: 465 ENANDS------------SDDSGEETDESFNPGEEEEDVAEEFDSNASASSSSNEGDSDR 512
Query: 407 ESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGI 466
+ K K +++ K + KK KDPNAPKR MS ++ + RE IK +PGI
Sbjct: 513 DEKKRKQLKKAKMAKERKSRKKPMEVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI 572
Query: 467 AFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
+ TD+ + GE WK MS E++E ++ KA ++ Y+ + Y+
Sbjct: 573 SITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAMKEYE 615
>gi|395858039|ref|XP_003801382.1| PREDICTED: FACT complex subunit SSRP1 [Otolemur garnettii]
Length = 710
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 180/523 (34%), Positives = 282/523 (53%), Gaps = 39/523 (7%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F +G + FE+ L++VSQ GKN+V LEFH +D + + SLME+ F++P +
Sbjct: 118 LLSFDIGDQPVFEIPLSNVSQCT-TGKNEVTLEFHQND----DAEVSLMEVRFYVPPTQE 172
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P + F ++S ADV +A+ F + LTPRGRY + ++ +FL L G
Sbjct: 173 DGVD-----PVEAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F D + L
Sbjct: 228 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
M+EE + +++ +L + G ++E+ + +++ L KIT PG F+ + S KA
Sbjct: 288 NMNEEEVEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP I +EI +V F R G + FD I K ++ F
Sbjct: 348 SSGLLYPLERGFIYVHKPPVHIRFDEISFVNFAR---GTTTTRSFDFEIETKQGTQYTFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
+I+R EY LFDF++ K L I N G + + + D+D D +L R+K E E
Sbjct: 405 SIEREEYGKLFDFVNAKKLNIKNRGLKEGMNPSYDEYADSDEDQHDAYLVRMKEEGKIRE 464
Query: 361 SDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKK--------------ESKK 406
+ DS +DDSGEE ++ G E+E A++ +S +
Sbjct: 465 ENANDS------------SDDSGEETDESFNPGEEEEDVAEEFDSNASASSSSNEGDSDR 512
Query: 407 ESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGI 466
+ K K S+D K + KK +DPNAPKR MS ++ + RE IK +PGI
Sbjct: 513 DEKKRKQLKKAKMSKDRKSRKKPMEVKKGRDPNAPKRPMSAYMLWLNASREKIKSDHPGI 572
Query: 467 AFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
+ TD+ + GE WK MS E++E ++ KA ++ Y+ + Y+
Sbjct: 573 SITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAMKEYE 615
>gi|323650248|gb|ADX97210.1| FACT complex subunit SSRP1 [Perca flavescens]
Length = 612
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 185/507 (36%), Positives = 283/507 (55%), Gaps = 23/507 (4%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F V AFEV L++VSQ GKN+V LEFH +D T SLME+ F++P S +
Sbjct: 118 LLSFEVNDSTAFEVPLSNVSQCA-TGKNEVTLEFHQNDDTEV----SLMEVRFYVPPSQS 172
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
DE P + F + ++S ADV +AV F+ + LTPRGRY + ++ +FL L G
Sbjct: 173 ----DERQDPVEAFAENVLSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPTFLHLHG 228
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F + + L
Sbjct: 229 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEEDLSLTL 288
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
MSEE + +++ KL + G ++E+ + +++ L KIT PG F+ + S KA
Sbjct: 289 NMSEEDVERRFEGKLSKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKA 348
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP + EEI V F R G + FD I K ++ F
Sbjct: 349 SSGLLYPLERGFIYVHKPPVHLRFEEISCVNFAR---GTTTTRSFDFEIETKQGNQYTFS 405
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
+I+R EY LFDF++ K L I N G + G + DDD D +LER+K E E
Sbjct: 406 SIEREEYGKLFDFVNAKKLNIKNRGFKEGMKGKIDEYSDSDDDQHDAYLERMKAEGKIRE 465
Query: 361 --SDEEDSDFVADKDDGGSPTDDSGEEDSDASE---SGGEKEKPAKKESKKESSSVKAST 415
+D E+SD + D+ +P GEED D +E S ++ + +S K
Sbjct: 466 EGNDSEESD--GESDESFNP----GEEDDDIAEEYDSNASASDSSEDGDDSDDASEKKKA 519
Query: 416 SKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVL 475
K K ++ K +K+KK+K+ PKR MS ++ + RE IK NPGI+ T++ +
Sbjct: 520 KKPKVVKEKKERKPRKEKKQKETGGPKRPMSAYMLWLNSSRERIKSENPGISITEISKKA 579
Query: 476 GERWKKMSVEEREPYESKARADKKRYK 502
GE W+++ +E+E +++KA K+ Y+
Sbjct: 580 GEMWRQLGKDEKEEWDTKAGEAKRNYE 606
>gi|326664195|ref|XP_001923156.2| PREDICTED: FACT complex subunit SSRP1 [Danio rerio]
Length = 713
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 180/510 (35%), Positives = 280/510 (54%), Gaps = 17/510 (3%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F V FE+ L+ VSQ GKN+V +EFH +D T SLME+ F++P +
Sbjct: 118 LLSFDVNDSPTFEIPLSSVSQCTT-GKNEVTVEFHQNDDTEV----SLMEVRFYVPPT-- 170
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
GDE P + F ++S ADV +AV F + LTPRGRY + ++ +FL L G
Sbjct: 171 --TGDEGSDPVEAFAQNVLSKADVIQATGDAVCIFRELQCLTPRGRYDIRIYPTFLHLHG 228
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F + + L
Sbjct: 229 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEETISLTL 288
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
M+E+ + +++ KL + G ++E+ + +++ L KIT PG F+ + S KA
Sbjct: 289 NMNEDEVERRFEGKLNKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKA 348
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP + EEI V F R G + FD I K ++ F
Sbjct: 349 SSGLLYPLERGFIYVHKPPVHLRFEEIACVNFAR---GTTTTRSFDFEIETKQGNQYTFS 405
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
+I+R EY LFDF++ K L I N G + G + + D+D D +LER+K E E
Sbjct: 406 SIEREEYGKLFDFVNAKKLSIKNRGFKEGMKGNDDMYSDSDEDQHDAYLERMKEEGKIRE 465
Query: 361 SDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKK-ESSSVKASTSKKK 419
+ D + D+ +P GEED D +E K ++ +++ +S + S KK
Sbjct: 466 EGNDSDDSEGESDESFNP----GEEDEDIAEEYDSKASASESSAEEGDSDEDRKKKSAKK 521
Query: 420 SRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERW 479
+ E +KK+KK KD APKR MS ++ + R+ IK NPGI+ T++ + GE W
Sbjct: 522 VKFVKERKPRKKEKKVKDSGAPKRPMSAYMLWLNSSRDRIKSENPGISITEISKKAGEMW 581
Query: 480 KKMSVEEREPYESKARADKKRYKDEISGYK 509
K++ +++E ++ KA KK Y + Y+
Sbjct: 582 KQLGKDKKEEWDGKAEEAKKEYDRAMREYR 611
>gi|449501868|ref|XP_004174468.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex subunit SSRP1
[Taeniopygia guttata]
Length = 705
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 177/513 (34%), Positives = 275/513 (53%), Gaps = 23/513 (4%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F +G++ FE+ L++VSQ GKN+V LEFH +D + + SLME+ F++P +
Sbjct: 118 LLSFDIGEQPVFEIPLSNVSQCT-TGKNEVTLEFHQND----DAEVSLMEVRFYVPPTQE 172
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P + F ++S ADV +A+ F + LTPRGRY + ++ +FL L G
Sbjct: 173 DGVD-----PVEAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++ PPI+ GQ ++ +++ T+ + L
Sbjct: 228 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISQVPPIKLGQEVFHFVIVAVFTEXDISLSL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
M+EE + +++ +L + G ++E+ + +++ L KIT PG F+ + S KA
Sbjct: 288 NMNEEEVEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP I +EI +V F R G + FD I K ++ F
Sbjct: 348 SSGLLYPLERGFIYVHKPPVHIRFDEISFVNFAR---GTTTTRSFDFEIETKQGTQYTFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
+I+R EY LFDF++ K L I N G + + D+D D +LER+K E E
Sbjct: 405 SIEREEYGKLFDFVNAKKLNIKNRGLKEGMKQSYDEYADSDEDQHDAYLERMKEEGKIRE 464
Query: 361 SDEEDSDFVADKDDGGSPTDDS---GEEDSDASESGGEKEKPAKKESKKESSSVKASTSK 417
+ DS D G TD S GEED D +E + +S +K
Sbjct: 465 ENANDSS-----DGSGEETDSSFNPGEEDDDVAEEFDSNASASSSSGDGDSDRDDKKPAK 519
Query: 418 KKSRDGDEDGKKKK--QKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVL 475
K D +KK+ KK KDPNAPKR MS ++ + RE IK +PGI+ TD+ +
Sbjct: 520 KAKIVKDRKPRKKQPESKKGKDPNAPKRPMSAYMLWLNANREKIKSDHPGISITDLSKKA 579
Query: 476 GERWKKMSVEEREPYESKARADKKRYKDEISGY 508
GE WK MS E++E ++ KA ++ Y+ + Y
Sbjct: 580 GELWKAMSKEKKEEWDRKAEDARRDYEKAMKEY 612
>gi|348514195|ref|XP_003444626.1| PREDICTED: FACT complex subunit SSRP1-like [Oreochromis niloticus]
Length = 709
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 185/513 (36%), Positives = 282/513 (54%), Gaps = 23/513 (4%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F V AFEV L++VSQ GKN+V LEFH +D T SLME+ F++P S +
Sbjct: 118 LLSFEVNDNTAFEVPLSNVSQCAT-GKNEVTLEFHQNDDTEV----SLMEVRFYVPPSQS 172
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
DE P + F ++S ADV +AV F+ + LTPRGRY + ++ +FL L G
Sbjct: 173 ----DERQDPVEAFAQNVLSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPTFLHLHG 228
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F + + L
Sbjct: 229 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEEDISLTL 288
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
MSEE + +++ KL G ++E+ + +++ L KIT PG F+ + S KA
Sbjct: 289 NMSEEDVERRFEGKLSKFMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKA 348
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP + EEI V F R G + FD I K ++ F
Sbjct: 349 SSGLLYPLERGFIYVHKPPVHLRFEEISCVNFAR---GTTTTRSFDFEIETKQGNQYTFS 405
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAG--- 357
+I+R EY LFDF++ K L I N G +G + DDD D +LER+K E
Sbjct: 406 SIEREEYGKLFDFVNAKKLNIKNRG---FKEGKIDEYSDSDDDQHDAYLERMKAEGKIRE 462
Query: 358 -GDESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSSVKASTS 416
G++SDE D + D+ +P ++ E + + + E ++ S+ K
Sbjct: 463 EGNDSDESD----GESDESFNPGEEDEEIAEEYDSNASASDSSEGGEESEDESAKKKKAK 518
Query: 417 KKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLG 476
K K ++ K +K+KK+KD PKR MS ++ + RE IK NPGI+ T++ + G
Sbjct: 519 KAKVVKEKKERKPRKEKKQKDAGGPKRPMSAYMLWLNSSRERIKSENPGISVTEISKKAG 578
Query: 477 ERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
E W+++S +E++ +E+KA KK+Y YK
Sbjct: 579 EMWRQLSKDEKQEWEAKAGEAKKQYDKAKKEYK 611
>gi|431918516|gb|ELK17735.1| 182 kDa tankyrase-1-binding protein [Pteropus alecto]
Length = 2600
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 178/524 (33%), Positives = 278/524 (53%), Gaps = 39/524 (7%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F +G + FE+ L++VSQ GKN+V LEFH +D + + SLME+ F++P +
Sbjct: 118 LLSFDIGDQPVFEIPLSNVSQCTT-GKNEVTLEFHQND----DAEVSLMEVRFYVPPTQE 172
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P + F ++S ADV +A+ F + LTPRGRY + ++ +FL L G
Sbjct: 173 DGVD-----PVEAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F D + L
Sbjct: 228 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
M+EE + +++ +L + G ++E+ + +++ L KIT PG F+ + S KA
Sbjct: 288 NMNEEEVEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP I +EI +V F R G + FD I K ++ F
Sbjct: 348 SSGLLYPLERGFIYVHKPPVHIRFDEISFVNFAR---GTTTTRSFDFEIETKQGTQYTFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
+I+R EY LFDF++ K L I N G + + + D+D D +LER+K E E
Sbjct: 405 SIEREEYGKLFDFVNVKKLNIKNRGLKEGMNPSYDDYADSDEDQHDAYLERMKEEGKIRE 464
Query: 361 SDEEDSDFVADKDDGGSPTDDSGEEDSDASESG--------------GEKEKPAKKESKK 406
+ DS +DDSGEE ++ G + +S +
Sbjct: 465 ENANDS------------SDDSGEETDESFNPGEEEEDVAEEFDSNASASSSSNEGDSDR 512
Query: 407 ESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGI 466
+ K K ++D K + KK KDPNAPKR MS ++ + RE IK +PGI
Sbjct: 513 DEKKRKQLKKAKMAKDRKSRKKPTEVKKGKDPNAPKRPMSAYMLWLNASREKIKLDHPGI 572
Query: 467 AFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYKN 510
+ TD+ + GE WK MS E++E ++ KA ++ Y+ + Y+
Sbjct: 573 SITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAMKEYEG 616
>gi|410057780|ref|XP_003954279.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex subunit SSRP1 [Pan
troglodytes]
Length = 709
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 179/523 (34%), Positives = 282/523 (53%), Gaps = 39/523 (7%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F +G + FE+ L++VSQ GKN+V LEFH +D + + SLME+ F++P +
Sbjct: 118 LLSFDIGDQPVFEIPLSNVSQCT-TGKNEVTLEFHQND----DAEVSLMEVRFYVPPTQE 172
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P + F ++S ADV +A+ F + LTPRGRY + ++ +FL L G
Sbjct: 173 DGVD-----PVEAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F D + L
Sbjct: 228 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
M+EE + +++ +L + G ++E+ + +++ L KIT PG F+ + S KA
Sbjct: 288 NMNEEEVEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ PP + +EI +V+ R G S FD I K ++ F
Sbjct: 348 SSGLLYPLERGFIYVHXPPVDMRLDEISFVKVAR---GTSGTRSFDFEIETKQGTQYTFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
+I+R EY LFDF++ K L I N G + + + D+D D +LER+K E E
Sbjct: 405 SIEREEYGKLFDFVNAKKLNIKNRGLKEGMNPSYDEYADSDEDQHDAYLERMKEEGKIRE 464
Query: 361 SDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKK--------------ESKK 406
+ DS +DDSGEE ++ G E+E A++ +S +
Sbjct: 465 ENANDS------------SDDSGEETDESFNPGEEEEDVAEEFDSNASASSSSNEGDSDR 512
Query: 407 ESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGI 466
+ K K ++D K + KK KDPNAPKR MS ++ + RE IK +PGI
Sbjct: 513 DEKKRKQLKKAKMAKDRKSRKKPVEVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI 572
Query: 467 AFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
+ TD+ + GE WK MS E++E ++ KA ++ Y+ + Y+
Sbjct: 573 SITDLSKKAGEIWKGMSKEKKEEWDRKAEDARRDYEKAMKEYE 615
>gi|338712138|ref|XP_001497140.3| PREDICTED: FACT complex subunit SSRP1 [Equus caballus]
Length = 680
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 176/502 (35%), Positives = 273/502 (54%), Gaps = 39/502 (7%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F +G + FE+ L++VSQ GKN+V LEFH +D + + SLME+ F++P +
Sbjct: 118 LLSFDIGDQPVFEIPLSNVSQCT-TGKNEVTLEFHQND----DAEVSLMEVRFYVPPTQ- 171
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
++ P + F ++S ADV +A+ F + LTPRGRY + ++ +FL L G
Sbjct: 172 ----EDGVDPVEAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F D + L
Sbjct: 228 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
M+EE + +++ +L + G ++E+ + +++ L KIT PG F+ + S KA
Sbjct: 288 NMNEEEVEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP I +EI +V F R G + FD I K ++ F
Sbjct: 348 SSGLLYPLERGFIYVHKPPVHIRFDEISFVNFAR---GTTTTRSFDFEIETKQGTQYTFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
+I+R EY LFDF++ K L I N G + + + D+D D +LER+K E E
Sbjct: 405 SIEREEYGKLFDFVNAKKLNIKNRGLKEGMNPNYDEYADSDEDQHDAYLERMKEEGKIRE 464
Query: 361 SDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKK--------------ESKK 406
+ DS +DDSGEE ++ G E+E A++ +S +
Sbjct: 465 ENANDS------------SDDSGEETDESFNPGEEEEDVAEEFDSNASASSSSNEGDSDR 512
Query: 407 ESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGI 466
+ K K ++D K + KK KDPNAPKR MS ++ + RE IK +PGI
Sbjct: 513 DEKKRKQLKKAKMAKDRKSRKKPMEVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGI 572
Query: 467 AFTDVGRVLGERWKKMSVEERE 488
+ TD+ + GE WK MS E++E
Sbjct: 573 SITDLSKKAGEIWKGMSKEKKE 594
>gi|327260386|ref|XP_003215015.1| PREDICTED: FACT complex subunit SSRP1-like [Anolis carolinensis]
Length = 705
Score = 291 bits (745), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 181/538 (33%), Positives = 289/538 (53%), Gaps = 47/538 (8%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F +G++ FE+ L++VSQ GKN+V LEFH +D + + SLME+ F++P +
Sbjct: 118 LLSFDIGEQPVFELPLSNVSQCT-TGKNEVTLEFHQND----DAEVSLMEVRFYVPPTQE 172
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P + F ++S ADV +A+ F + LTPRGRY + ++ +FL L G
Sbjct: 173 DGVD-----PVEAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F D + L
Sbjct: 228 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
M+E+ + +++ +L + G ++E+ + +++ L KIT PG F+ + S KA
Sbjct: 288 NMNEDEVEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP I +EI +V F R G + FD I K ++ F
Sbjct: 348 SSGLLYPLERGFIYVHKPPVHIRFDEIAFVNFAR---GTTTTRSFDFEIETKQGTQYTFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQED----DDDAVDPHLERIKNEA 356
+I+R EY LFDF++ K L I N G +G+ + ++ D+D D +LER+K E
Sbjct: 405 SIEREEYGKLFDFVNAKKLNIKNRG---LKEGMKNMPYDEYAGSDEDTHDAYLERMKEEG 461
Query: 357 GGDESDEEDSDFVADKDDGGSPTDDS---------GEEDSDASESGGEKEKPAKKESKKE 407
E DS +D G TD+S E+ D++ S + KK+
Sbjct: 462 KIREEHANDSS-----EDSGEETDESFNPVEEEEDVAEEFDSNASASSSSNEGDSDEKKK 516
Query: 408 SSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIA 467
+ ++K R +G KK KDPNAPKR +S ++ + R+ I+ +PG++
Sbjct: 517 PAKKAKIVKERKPRKRQSEG-----KKGKDPNAPKRPLSAYMLWLNANRDKIRSESPGMS 571
Query: 468 FTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYKNPKPMDIDSGNESDSA 525
TDV + GE WK MS E++E ++ KA K+ Y+ + Y + G +SDS+
Sbjct: 572 VTDVSKKAGELWKAMSKEKKEEWDRKAEDAKRDYEKAMKEY--------NEGGKSDSS 621
>gi|350409390|ref|XP_003488719.1| PREDICTED: FACT complex subunit Ssrp1-like [Bombus impatiens]
Length = 736
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 194/518 (37%), Positives = 280/518 (54%), Gaps = 28/518 (5%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F VG AFE+ L DVSQ GKN+V LEFH +D SLME+ FHIP S++
Sbjct: 117 VLSFDVGHHTAFEIPLYDVSQCNT-GKNEVTLEFHQNDDAPV----SLMEMRFHIPISDS 171
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
+ P + F ++M A V + +A+ F I LTPRGRY +++ SF +L G
Sbjct: 172 A-----DQDPVEAFHQQVMEKASVISVSGDAIAIFREIQCLTPRGRYDIKIFQSFFQLHG 226
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI S+V+RLFLLP + + VV+LDPPI++GQT Y ++VL F + EL
Sbjct: 227 KTFDYKIPMSTVLRLFLLPHKDNRQMYFVVSLDPPIKQGQTRYHYLVLLFNQEEETSIEL 286
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
SE+ L KY+DKL G +EV +++ + K+T PG F S A+ S KA
Sbjct: 287 PFSEKELKEKYEDKLPKELSGPTYEVLGKVMKVIINRKLTGPGNFISHSGTLAISCSFKA 346
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLE+ F ++ KPP I EEI V F R GG + FD I L + H F
Sbjct: 347 AAGYLYPLERGFIYVHKPPIHIRFEEIASVNFAR---GGGSTRSFDFEIELTSGVVHTFS 403
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAG--- 357
+I++ EY LFDFI+ K L++ N G + D +D D +L R+K EA
Sbjct: 404 SIEKEEYGKLFDFITSKKLRVKNRGKSDKLNYDNDFGDSDQEDEPDAYLARVKAEAQERD 463
Query: 358 ---GDESDEE--DSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSSVK 412
+S+EE D DF ++D+ +D + E DS+ + S E E A +S+K+ K
Sbjct: 464 AEENQDSEEESTDEDFNPNQDE----SDVAEEYDSNPNSSESENESDASGKSQKKEKKEK 519
Query: 413 ASTSKKKSRDGDE-DGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDV 471
K ++ E K +KQKK+KD N PKR + F+ + RE IK NPGIA T++
Sbjct: 520 REKKAKSAKTVSEKPRKPRKQKKEKDANKPKRPPTAFMIWLNSARERIKAENPGIAVTEI 579
Query: 472 GRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
+ GE W+++ +++ +E KA KK Y + Y+
Sbjct: 580 AKKGGEMWREL--KDKSEWEQKAAKAKKEYTASMKEYE 615
>gi|260803411|ref|XP_002596583.1| hypothetical protein BRAFLDRAFT_154496 [Branchiostoma floridae]
gi|229281842|gb|EEN52595.1| hypothetical protein BRAFLDRAFT_154496 [Branchiostoma floridae]
Length = 710
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 182/522 (34%), Positives = 295/522 (56%), Gaps = 29/522 (5%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F + AFE+ L +VS KN+V LEFH +D SLME+ F++P
Sbjct: 116 LLSFDIDNMSAFEIPLGNVSHCA-TSKNEVALEFHQNDDADV----SLMEMRFYVP---- 166
Query: 61 QFVGDENHP---PAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLR 117
++++P P Q F D +M AD+ +A+ F+ + LTPRGRY V ++ +FL
Sbjct: 167 ---PNQDNPDVDPVQAFHDNVMDKADIIQATGDAICIFKELQCLTPRGRYDVRIYPTFLH 223
Query: 118 LQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQ 177
L G+ D+K+ Y++V+RLFLLP +Q F VV+LDPPI++GQT Y ++LQF + +
Sbjct: 224 LHGKTFDYKLPYTTVLRLFLLPHKDQRQMFFVVSLDPPIKQGQTRYHFLILQFSKEEDMT 283
Query: 178 SELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSS 237
EL +SEE K++ KL+ G ++E+ + +++ + KIT PG F+ AV S
Sbjct: 284 LELSLSEEDCADKFEGKLQKEMSGPVYEIVSRVMKSMVNRKITVPGSFKGNSGTSAVSCS 343
Query: 238 LKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEH 297
KA G LYPLE+ F ++ KPP + +EI V F R A FD I K+ +
Sbjct: 344 HKAGAGFLYPLERGFIYVHKPPIHLRFDEISCVNFARGVASNRT---FDFEIETKSGTTY 400
Query: 298 LFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAA---VLQEDDDDAVDPHLERIKN 354
F +I++ EY LFDF + K L++ N G D V ++ DD+ D ++ER+K
Sbjct: 401 TFSSIEKEEYGKLFDFTTNKKLRVKNRGK-NLKDSVNYDEDMMGSDDEGQHDAYMERVKA 459
Query: 355 EAG----GDESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSS 410
EA D+ +D + AD + GS +D + E DS+AS S ++++ +++ ++
Sbjct: 460 EAAEGISDDDESSDDEEEDADFNPDGSGSDLAEEYDSNASISSSDEDEEDEEKKERRKKK 519
Query: 411 VKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTD 470
++ + SK R K+K+++KKDPNAPK+AM+ F+ + R ++K NP + +
Sbjct: 520 LEKAKSKPAKR---RRTSKRKKRQKKDPNAPKKAMTAFMLWLNATRSELRKENPDASIGE 576
Query: 471 VGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYKNPK 512
+G++ GE+W++M ++E +E KA+ DK+RYK + Y+ K
Sbjct: 577 IGKIAGEKWREMGPSDKEEWEQKAKEDKERYKAAMEEYQARK 618
>gi|410913681|ref|XP_003970317.1| PREDICTED: FACT complex subunit SSRP1-like [Takifugu rubripes]
Length = 705
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 178/498 (35%), Positives = 276/498 (55%), Gaps = 23/498 (4%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L F + + AFE+ L++VSQ GKN+V LEFH +D T + SLME+ F++P + T
Sbjct: 118 LLQFDINENTAFEIPLSNVSQCA-TGKNEVTLEFHQNDDT----EISLMEVRFYVPPNQT 172
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
DE P + F ++S ADV +AV F+ + LTPRGRY + ++ +FL L G
Sbjct: 173 ----DERQDPVEAFAQNVLSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPTFLHLHG 228
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F + + L
Sbjct: 229 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEENINLAL 288
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
MSEE + +++ KL G ++E+ + +++ L KIT PG F+ + S KA
Sbjct: 289 NMSEEDVERRFEGKLSKHMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKA 348
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP + EEI V F R G + FD I K ++ F
Sbjct: 349 SSGLLYPLERGFIYVHKPPVHLRFEEISCVNFAR---GTTTTRSFDFEIETKQGNQYTFS 405
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
+I+R EY LFDF++ K L I N G +G + DDD D +LER+K E E
Sbjct: 406 SIEREEYGKLFDFVNAKKLNIKNRG---FKEGKIDEYSDSDDDQHDAYLERMKAEGKIRE 462
Query: 361 SDEEDSDFVADKDDGGSPTDDSGEEDSDASE----SGGEKEKPAKKESKKESSSVKASTS 416
+ + + D+ +P GEED D +E + + + + ++ S+ K
Sbjct: 463 EGNDSDESDSGSDESFNP----GEEDDDIAEEYDSNASASDSSDEGDDSEDESAKKKKAK 518
Query: 417 KKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLG 476
K K ++ K +K+KK+KD PKR MS ++ + RE IK NPGI+ T++ + G
Sbjct: 519 KVKVVKEKKERKPRKEKKQKDTGGPKRPMSAYMLWLNASRERIKSENPGISVTEISKKAG 578
Query: 477 ERWKKMSVEEREPYESKA 494
E W+++ +E+E +E+KA
Sbjct: 579 EMWRQLGKDEKEEWETKA 596
>gi|340713595|ref|XP_003395326.1| PREDICTED: FACT complex subunit Ssrp1-like [Bombus terrestris]
Length = 735
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 194/518 (37%), Positives = 280/518 (54%), Gaps = 28/518 (5%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F VG AFE+ L DVSQ GKN+V LEFH +D SLME+ FHIP S++
Sbjct: 117 VLSFDVGHHTAFEIPLYDVSQCNT-GKNEVTLEFHQNDDAPV----SLMEMRFHIPISDS 171
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
+ P + F ++M A V + +A+ F I LTPRGRY +++ SF +L G
Sbjct: 172 V-----DQDPVEAFHQQVMEKASVISVSGDAIAIFREIQCLTPRGRYDIKIFQSFFQLHG 226
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI S+V+RLFLLP + + VV+LDPPI++GQT Y ++VL F + EL
Sbjct: 227 KTFDYKIPMSTVLRLFLLPHKDNRQMYFVVSLDPPIKQGQTRYHYLVLLFNQEEETSIEL 286
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
SE+ L KY+DKL G +EV +++ + K+T PG F S A+ S KA
Sbjct: 287 PFSEKELKEKYEDKLPKELSGPTYEVLGKVMKVIINRKLTGPGNFISHSGTLAISCSFKA 346
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLE+ F ++ KPP I EEI V F R GG + FD I L + H F
Sbjct: 347 AAGYLYPLERGFIYVHKPPIHIRFEEIASVNFAR---GGGSTRSFDFEIELTSGVVHTFS 403
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAG--- 357
+I++ EY LFDFI+ K L++ N G + D +D D +L R+K EA
Sbjct: 404 SIEKEEYGKLFDFITSKKLRVKNRGKSDKLNYDNDFGDSDQEDEPDAYLARVKAEAQERD 463
Query: 358 ---GDESDEE--DSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSSVK 412
+S+EE D DF ++D+ +D + E DS+ + S E E A +S+K+ K
Sbjct: 464 AEENQDSEEESTDEDFNPNQDE----SDVAEEYDSNPNSSESENESDASGKSQKKEKKEK 519
Query: 413 ASTSKKKSRDGDE-DGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDV 471
K ++ E K +KQKK+KD N PKR + F+ + RE IK NPGIA T++
Sbjct: 520 KEKKPKSAKTVSEKPRKPRKQKKEKDANKPKRPPTAFMIWLNSARERIKAENPGIAVTEI 579
Query: 472 GRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
+ GE W+++ +++ +E KA KK Y + Y+
Sbjct: 580 AKKGGEMWREL--KDKSEWEQKAAKAKKEYTASMKEYE 615
>gi|426245460|ref|XP_004023562.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex subunit SSRP1 [Ovis
aries]
Length = 703
Score = 287 bits (734), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 171/510 (33%), Positives = 270/510 (52%), Gaps = 21/510 (4%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F +G + FE+ L++VSQ GKN+V LEFH +D + + SLME+ F++P +
Sbjct: 118 LLSFDIGDQPVFEIPLSNVSQCT-TGKNEVTLEFHQND----DAEVSLMEVRFYVPPTQE 172
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P + F ++S ADV +A+ F + LTPRGRY + ++ +FL L G
Sbjct: 173 DGVD-----PVEAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F D + L
Sbjct: 228 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
M+E + +L + G ++E+ + +++ L KIT PG F+ + S KA
Sbjct: 288 NMNEX------EGQLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKA 341
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP I +EI +V F R G + FD I K ++ F
Sbjct: 342 SSGLLYPLERGFIYVHKPPVHIRFDEISFVNFAR---GTTTTRSFDFEIETKQGTQYTFS 398
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
+I+R EY LFDF++ K L I N G + + + D+D D +LER+K E
Sbjct: 399 SIEREEYGKLFDFVNAKKLNIKNRGLKEGMNPNYDEYADSDEDQHDAYLERMKEEGXXRG 458
Query: 361 SDEEDSD--FVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSSVKASTSKK 418
S + D+ +P ++ + + + + +S +E K K
Sbjct: 459 GGGAQSSRGLCSFSDESFNPGEEEEDVAEEFDSNASASSSSNEGDSDREEKKRKQLKKAK 518
Query: 419 KSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGER 478
++D K + KK KDPNAPKR MS ++ + RE IK +PGI+ TD+ + GE
Sbjct: 519 MAKDRKSRKKPLEVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISVTDLSKKAGEI 578
Query: 479 WKKMSVEEREPYESKARADKKRYKDEISGY 508
WK MS E++E ++ KA ++ Y+ + Y
Sbjct: 579 WKGMSKEKKEEWDRKAEEARREYEKAMKEY 608
>gi|313224463|emb|CBY20253.1| unnamed protein product [Oikopleura dioica]
Length = 671
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 180/501 (35%), Positives = 275/501 (54%), Gaps = 19/501 (3%)
Query: 9 KQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFVGDENH 68
K+AFE+ L +VS KN++ L FH ++ A ++ME FH+P + DEN
Sbjct: 129 KKAFEIPLGNVSNCT-SNKNELSLTFHQNEDANAL---TMMECRFHMP------MADENS 178
Query: 69 PPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQ 128
PA I S ADV A +T I LTPRGRY V+L FL L G +DFK+
Sbjct: 179 DPAAEMAAMITSRADVLEAKGNAFMTLPSIQCLTPRGRYDVKLFDKFLHLHGATHDFKLT 238
Query: 129 YSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLN 188
Y+S++RLFLLP +Q F V+ +DPPI++GQT YP I+ F+ + + + E +
Sbjct: 239 YTSIIRLFLLPHKDQRQVFFVIAIDPPIKQGQTRYPFIICVFDKEKYEEINFDLDEAEVE 298
Query: 189 TKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPL 248
+++ KL+ + +G +E+ + +++ ++G KIT PG F+S + S KA+ GVL+PL
Sbjct: 299 ERFEGKLQKNMQGPHYELVSRLMKAVTGRKITVPGNFKSNSSLACMACSYKAQSGVLFPL 358
Query: 249 EKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYH 308
E+ F +L KPP + +EID V F R + + + F+ I+ K Q+H+F I R EY+
Sbjct: 359 ERGFMYLHKPPMHLRFDEIDNVNFARES---TKLRSFEFHIQTKQGQKHIFGTIDRAEYN 415
Query: 309 NLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDESDEEDSDF 368
FDF+ KGLKI N+ + V D+ D + ++K+E G E ++ +SD
Sbjct: 416 CFFDFVKQKGLKIKNINKHEQQR-VENFSDSSGDEYPDHYANKLKDEVRGMEDEDSESDD 474
Query: 369 VADKDDGGSPTDDSG---EEDSDASESGGEKEKPAKKES--KKESSSVKASTSKKKSRDG 423
D P G E DSD ++ + E S ++ + K +
Sbjct: 475 SDFDPDKADPEAKEGGDEEFDSDFADRSTDSEDRGSDASEEERPKKKKEVKEKKPRKEKS 534
Query: 424 DEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMS 483
+DG +KK +KKK+ + PKRAMS + FF ERENIK+ NPGI T+V ++ GERW++++
Sbjct: 535 SKDGVEKKTRKKKNKDGPKRAMSAYFFFINEERENIKRDNPGIKVTEVSKIAGERWREIN 594
Query: 484 VEEREPYESKARADKKRYKDE 504
++ YE KA DK+RY+ E
Sbjct: 595 ANDKAKYEEKALKDKERYERE 615
>gi|346468357|gb|AEO34023.1| hypothetical protein [Amblyomma maculatum]
Length = 734
Score = 284 bits (727), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 180/531 (33%), Positives = 287/531 (54%), Gaps = 42/531 (7%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIP---N 57
+L+F V + A+E+ L +VS KN+V LEFH +D SLME+ FHIP N
Sbjct: 117 VLSFDVDKNSAYEIPLGNVSHCTT-AKNEVTLEFHQNDDAAV----SLMELRFHIPTDPN 171
Query: 58 SNTQFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLR 117
S+T P Q FR+ ++S A + +A+VTF+ + LTPRGRY +++ SF++
Sbjct: 172 SDTD--------PIQAFRNNVLSKASIIQATGDAMVTFKELQCLTPRGRYDIKIFPSFIQ 223
Query: 118 LQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQ 177
L G+ D+KI ++V+RLFLLP + F V++LDPPI++GQT Y ++L F +
Sbjct: 224 LHGKTFDYKIPLTTVLRLFLLPHKDNRQVFFVLSLDPPIKQGQTRYHFLILLFNKEEETS 283
Query: 178 SELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSS 237
EL +S+ + K++DKL+ + G EV + +++ + KIT PG F+ + S
Sbjct: 284 IELALSDADIQEKFEDKLQKNMSGPTFEVISRVMKAVVQRKITVPGNFKGHGGTNCITCS 343
Query: 238 LKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEH 297
+A +G+LYPLE+ F ++ KPP I +EI V F R +GGS FD + K+ H
Sbjct: 344 YRAGNGLLYPLERGFIYIHKPPVHIRFDEIACVNFAR--SGGST-RSFDFEVEAKSGLVH 400
Query: 298 LFRNIQRNEYHNLFDFISGKGLKIMNLGDM-----KTTDGVAAVLQEDDDDAVDPHLERI 352
F +I++ EY LFD++S K L+I N G + K ++ D +DA D +L R+
Sbjct: 401 TFSSIEKEEYGRLFDYVSDKKLRIKNRGSLGASKEKPNYNDDELIDSDAEDAPDAYLARV 460
Query: 353 KNEAGGDESDEEDSDFVADK--DDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSS 410
K+E G + DE DSD +D+ + G S ++ + E DS+ S + + S
Sbjct: 461 KDE--GRQRDEGDSDESSDESFNPGESGSEVAEEFDSNVESSSDSEAGSGGGKGSGSGSD 518
Query: 411 V------------KASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMEREN 458
K+ ++K G ++ K ++QKK++D N PKR S + + R+
Sbjct: 519 AHEKSKKEKKEKKKSKSAKTVKEPGMKERKPRRQKKERDANKPKRPPSAYFLWLAENRDK 578
Query: 459 IKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
IKK NP + TDV + GE WK+ V ++ +E +A +YK+ ++ Y+
Sbjct: 579 IKKDNPSFSITDVTKRAGELWKE--VTDKSKWEQQAVEAAAKYKEAMAAYQ 627
>gi|383859589|ref|XP_003705276.1| PREDICTED: FACT complex subunit Ssrp1-like [Megachile rotundata]
Length = 740
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 189/497 (38%), Positives = 267/497 (53%), Gaps = 38/497 (7%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F VG AFE+ L DVSQ GKN+V LEFH +D SLME+ FHIP S++
Sbjct: 117 VLSFDVGHHTAFEIPLYDVSQCNT-GKNEVTLEFHQNDDAPV----SLMEMRFHIPVSDS 171
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
+ P + F ++M A V + +A+ F I LTPRGRY +++ SF +L G
Sbjct: 172 V-----DQDPVEAFHQQVMEKASVISVSGDAIAIFREIQCLTPRGRYDIKIFQSFFQLHG 226
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI S+V+RLFLLP + + VV+LDPPI++GQT Y ++VL F + EL
Sbjct: 227 KTFDYKIPMSTVLRLFLLPHKDNRQMYFVVSLDPPIKQGQTRYHYLVLLFNQEEETSIEL 286
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
SE+ L KY+DKL G +EV +++ + K+T PG F S A+ S KA
Sbjct: 287 PFSEKELKEKYEDKLPKELSGPTYEVMGKVMKVIINRKLTGPGNFISHSGTLAISCSFKA 346
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLE+ F ++ KPP I EEI V F R GG + FD I L + H F
Sbjct: 347 AAGYLYPLERGFIYVHKPPIHIRFEEIASVNFAR---GGGSTRSFDFEIELTSGVVHTFS 403
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEA---- 356
+I++ EY LFDFI+ K L++ N G + D +D D +L R+K EA
Sbjct: 404 SIEKEEYGKLFDFITSKKLRVKNRGKSDKLNYDNDFGDSDQEDEPDAYLARVKAEAQERD 463
Query: 357 --GGDESDEE--DSDFVADKDDG-------GSPTDDSGEEDSDASESGGEKEKPAKKESK 405
+S+EE D DF ++D+ +P E DSDAS G+ EK KKE K
Sbjct: 464 AEDNQDSEEESTDEDFNPNQDESDVAEEYDSNPNSSESENDSDAS---GKSEKKEKKEKK 520
Query: 406 KESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPG 465
++ + S+K K +KQKK++D N PKR + F+ + RE IK NPG
Sbjct: 521 EKKPKSAKTVSEKPR-------KPRKQKKERDANKPKRPPTAFMIWLNSNREKIKADNPG 573
Query: 466 IAFTDVGRVLGERWKKM 482
IA T++ + GE W+++
Sbjct: 574 IAVTEIAKKGGEMWREL 590
>gi|110766132|ref|XP_001120264.1| PREDICTED: FACT complex subunit Ssrp1 [Apis mellifera]
Length = 728
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 194/524 (37%), Positives = 277/524 (52%), Gaps = 40/524 (7%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F VG AFE+ L DVSQ GKN+V LEFH +D SLME+ FHIP S++
Sbjct: 117 VLSFDVGHHTAFEIPLYDVSQCNT-GKNEVTLEFHQNDDAPV----SLMEMRFHIPVSDS 171
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
+ P + F ++M A V + +A+ F I LTPRGRY +++ SF +L G
Sbjct: 172 A-----DQDPVEAFHQQVMEKASVISVSGDAIAIFREIQCLTPRGRYDIKIFQSFFQLHG 226
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI S+V+RLFLLP + + VV+LDPPI++GQT Y ++VL F + EL
Sbjct: 227 KTFDYKIPMSTVLRLFLLPHKDNRQMYFVVSLDPPIKQGQTRYHYLVLLFNQEEETSIEL 286
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
SE+ L KY+DKL G EV +++ + K+T PG F S A+ S KA
Sbjct: 287 PFSEKELKEKYEDKLPKELSGPTFEVLGKVMKVIINRKLTGPGNFISHSGTLAISCSFKA 346
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLE+ F ++ KPP I EEI V F R GG + FD I L + H F
Sbjct: 347 AAGYLYPLERGFIYVHKPPIHIRFEEIASVNFAR---GGGSTRSFDFEIELTSGVVHTFS 403
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIK------- 353
+I++ EY LFDFI+ K L++ N G + D +D D +L R+K
Sbjct: 404 SIEKEEYGKLFDFITSKKLRVKNRGKSDKLNYDNDFGDSDQEDEPDAYLARVKAEAEERD 463
Query: 354 ---NEAGGDESDEEDSDFVADKDD-----GGSPTDDSGEEDSDASESGGEKEKPAKKESK 405
N+ +ES +ED + D+ D +P E DSD S G+ +K KKE K
Sbjct: 464 AEENQDSEEESTDEDFNPNQDESDVAEEYDSNPNSSESENDSDVS---GKSQKKEKKEKK 520
Query: 406 KESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPG 465
++ S + S+K K +KQKK+KD N PKR + F+ + RE IK NPG
Sbjct: 521 EKKSKSAKTVSEKPR-------KPRKQKKEKDTNKPKRPPTAFMMWLNSARERIKAENPG 573
Query: 466 IAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
IA T++ + GE W+++ +++ +E KA KK Y + Y+
Sbjct: 574 IAVTEIAKKGGEMWREL--KDKSEWEQKAAKAKKDYSASMKEYE 615
>gi|194752689|ref|XP_001958652.1| GF12460 [Drosophila ananassae]
gi|190619950|gb|EDV35474.1| GF12460 [Drosophila ananassae]
Length = 728
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 190/519 (36%), Positives = 275/519 (52%), Gaps = 25/519 (4%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F K FEV L+ VSQ + GKN+V LEFH +D L+E+ FHIP +
Sbjct: 118 VLSFDKESKTIFEVPLSHVSQC-VTGKNEVTLEFHQNDDAPVG----LLEMRFHIPAVES 172
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
DE+ P F +M+ A V + E++ F I ILTPRGRY +++ +F +L G
Sbjct: 173 ---ADED--PVDKFHQNVMNKASVISASGESIAIFREIQILTPRGRYDIKIFSTFFQLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI SV+RLF+LP + F V++LDPPI++GQT Y ++VL F D EL
Sbjct: 228 KTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLDPPIKQGQTRYHYLVLLFAPDEETTIEL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
+EE L KY KLE G ++EV +++ L G KIT PG F AV S KA
Sbjct: 288 PFTEEELRDKYDGKLEKELSGPVYEVMGKVMKVLIGRKITGPGNFIGHSGTAAVGCSFKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLE+ F ++ KPP I EEI V F R +GGS FD + LK H+F
Sbjct: 348 AAGYLYPLERGFIYIHKPPLHIRFEEISSVNFAR--SGGST-RSFDFEVTLKNGTVHIFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEA---- 356
+I++ EY LFDFI+ K L + N+G K+ D+++ D +L R+K EA
Sbjct: 405 SIEKEEYAKLFDFITQKKLHVSNMGKDKSGYKDVDFGDSDNENEPDAYLARLKAEAREKE 464
Query: 357 -----GGDESDEEDSDFVADKDDGGSPTD-DSGEEDSDASESGGEKEKPAKKESKKESSS 410
+ + D DF ++++ + DS E +S +KK+
Sbjct: 465 EDDDGDDSDEESTDEDFKPNENESDVAEEYDSNVESDSDDDSDASGGGGDSDGAKKKHKE 524
Query: 411 VKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTD 470
KA +KK + E + KK KKK+ + PKRA + F+ + RE IKK NPGI T+
Sbjct: 525 KKAEKKEKKEKKHKEKERTKKPSKKKESDKPKRATTAFMLWLNDTREKIKKENPGIKVTE 584
Query: 471 VGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
+ + GE WK++ +++ +E A DK RY++E+ YK
Sbjct: 585 IAKKGGEMWKEL--KDKSKWEEAAAKDKLRYQEEMRNYK 621
>gi|91091374|ref|XP_973014.1| PREDICTED: similar to AGAP012335-PA [Tribolium castaneum]
Length = 712
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 183/522 (35%), Positives = 273/522 (52%), Gaps = 34/522 (6%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F VG AFE+ L VSQ GKN++ +EFH +D SLME+ F IP++
Sbjct: 117 VLSFEVGHNSAFEIPLNHVSQC-TAGKNEITMEFHQNDDAPV----SLMEMRFFIPSN-- 169
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
+ GD + P + F+ ++M A V + +A+ F I LTPRGRY +++ +F +L G
Sbjct: 170 ELAGDVD--PVEAFQKQVMKKASVISVSGDAIAIFREIQCLTPRGRYDIKIFQTFFQLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI S+V+RLFLLP + F VV+LDPPI++GQT Y +VL F + EL
Sbjct: 228 KTFDYKIPMSTVLRLFLLPHKDNRQMFFVVSLDPPIKQGQTRYHFLVLLFGQEEETSIEL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
++E L KY+ KL+ G +EV +++ + K+T PG F A+ S KA
Sbjct: 288 PFTDEELKDKYEGKLDKELSGPTYEVLGKVMKVIINRKLTGPGGFVGHSGTPAIGCSFKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLE+ F ++ KPP I EE+ V F R GG + FD I LK+ H F
Sbjct: 348 AAGYLYPLERGFMYVHKPPIHIRFEEVASVNFAR---GGGSTRSFDFEIELKSGTVHTFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
+I++ EY+ LFDFI+ K L I N G D++ A D +LER+K EA E
Sbjct: 405 SIEKEEYNKLFDFITTKKLNIKNRGKNDKGGYNDDFGDSDNEAAPDAYLERVKAEA--QE 462
Query: 361 SDEEDSDFVAD---KDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSS------- 410
DE+D D ++ D+ PT D +SD +E E +++ S
Sbjct: 463 RDEDDDDGPSEDESTDEDFKPTQD----ESDVAEEFDSSPSSTSSEDEEKGSGDEHKKKH 518
Query: 411 ----VKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGI 466
+ KK ++ E ++K+ KK KD N PKR + F+ + R+ IK NPGI
Sbjct: 519 KKEKKEKKEKKKPAKTVSEKPRQKRAKKSKDENKPKRPSTAFMLWLNEMRDKIKADNPGI 578
Query: 467 AFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGY 508
T++ + GE WK++ +++ +E KA K+ Y + Y
Sbjct: 579 KITEIAKKGGEMWKEL--KDKSEWEGKAAKAKEEYNKAMKEY 618
>gi|380011419|ref|XP_003689803.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex subunit Ssrp1-like
[Apis florea]
Length = 729
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 193/524 (36%), Positives = 276/524 (52%), Gaps = 40/524 (7%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F VG AFE+ L DVSQ GKN+V LEFH +D SLME+ FHIP S++
Sbjct: 117 VLSFDVGHHTAFEIPLYDVSQCNT-GKNEVTLEFHQNDDAPV----SLMEMRFHIPVSDS 171
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
+ P + F ++M A V + +A+ F I LTPRGRY +++ SF +L G
Sbjct: 172 A-----DQDPVEAFHQQVMEKASVISVSGDAIAIFREIQCLTPRGRYDIKIFQSFFQLHG 226
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI S+V+RLFLLP + + VV+LDPPI++GQT Y ++VL F + EL
Sbjct: 227 KTFDYKIPMSTVLRLFLLPHKDNRQMYFVVSLDPPIKQGQTRYHYLVLLFNQEEETSIEL 286
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
SE+ L KY+DKL G EV +++ + K+T PG F S A+ S KA
Sbjct: 287 PFSEKELKEKYEDKLPKELSGPTFEVLGKVMKVIINRKLTGPGNFISHSGTLAISCSFKA 346
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLE+ F ++ KPP I EEI V F R GG + FD I L + H F
Sbjct: 347 AAGYLYPLERGFIYVHKPPIHIRFEEIASVNFAR---GGGSTRSFDFEIELTSGVVHTFS 403
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIK------- 353
+I++ EY LFDFI+ K L++ N G + D +D D +L R+K
Sbjct: 404 SIEKEEYGKLFDFITSKKLRVKNRGKSDKLNYDNDFGDSDQEDEPDAYLARVKAEAEERD 463
Query: 354 ---NEAGGDESDEEDSDFVADKDD-----GGSPTDDSGEEDSDASESGGEKEKPAKKESK 405
N+ +ES +ED + D+ D +P E DSD S G+ +K KKE K
Sbjct: 464 AEENQDSEEESTDEDFNPNQDESDVAEEYDSNPNSSESENDSDVS---GKSQKKEKKEKK 520
Query: 406 KESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPG 465
++ S + S+K K +K KK+KD N PKR + F+ + RE IK NPG
Sbjct: 521 EKKSKSAKTVSEKPR-------KPRKXKKEKDANKPKRPPTAFMMWLNSARERIKAENPG 573
Query: 466 IAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
IA T++ + GE W+++ +++ +E KA KK Y + Y+
Sbjct: 574 IAVTEIAKKGGEMWREL--KDKSEWEQKAAKAKKDYSASMKEYE 615
>gi|270014157|gb|EFA10605.1| hypothetical protein TcasGA2_TC012866 [Tribolium castaneum]
Length = 840
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 183/522 (35%), Positives = 273/522 (52%), Gaps = 34/522 (6%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F VG AFE+ L VSQ GKN++ +EFH +D SLME+ F IP++
Sbjct: 245 VLSFEVGHNSAFEIPLNHVSQCT-AGKNEITMEFHQNDDAPV----SLMEMRFFIPSN-- 297
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
+ GD + P + F+ ++M A V + +A+ F I LTPRGRY +++ +F +L G
Sbjct: 298 ELAGDVD--PVEAFQKQVMKKASVISVSGDAIAIFREIQCLTPRGRYDIKIFQTFFQLHG 355
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI S+V+RLFLLP + F VV+LDPPI++GQT Y +VL F + EL
Sbjct: 356 KTFDYKIPMSTVLRLFLLPHKDNRQMFFVVSLDPPIKQGQTRYHFLVLLFGQEEETSIEL 415
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
++E L KY+ KL+ G +EV +++ + K+T PG F A+ S KA
Sbjct: 416 PFTDEELKDKYEGKLDKELSGPTYEVLGKVMKVIINRKLTGPGGFVGHSGTPAIGCSFKA 475
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLE+ F ++ KPP I EE+ V F R GG + FD I LK+ H F
Sbjct: 476 AAGYLYPLERGFMYVHKPPIHIRFEEVASVNFAR---GGGSTRSFDFEIELKSGTVHTFS 532
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
+I++ EY+ LFDFI+ K L I N G D++ A D +LER+K EA E
Sbjct: 533 SIEKEEYNKLFDFITTKKLNIKNRGKNDKGGYNDDFGDSDNEAAPDAYLERVKAEA--QE 590
Query: 361 SDEEDSDFVAD---KDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSS------- 410
DE+D D ++ D+ PT D +SD +E E +++ S
Sbjct: 591 RDEDDDDGPSEDESTDEDFKPTQD----ESDVAEEFDSSPSSTSSEDEEKGSGDEHKKKH 646
Query: 411 ----VKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGI 466
+ KK ++ E ++K+ KK KD N PKR + F+ + R+ IK NPGI
Sbjct: 647 KKEKKEKKEKKKPAKTVSEKPRQKRAKKSKDENKPKRPSTAFMLWLNEMRDKIKADNPGI 706
Query: 467 AFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGY 508
T++ + GE WK++ +++ +E KA K+ Y + Y
Sbjct: 707 KITEIAKKGGEMWKEL--KDKSEWEGKAAKAKEEYNKAMKEY 746
>gi|307180072|gb|EFN68140.1| FACT complex subunit Ssrp1 [Camponotus floridanus]
Length = 739
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 187/497 (37%), Positives = 263/497 (52%), Gaps = 38/497 (7%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F VG AFE+ L DVSQ GKN+V LEFH +D SLME+ FHIP S++
Sbjct: 117 ILSFDVGHHTAFEIPLYDVSQCN-TGKNEVTLEFHQNDDAPV----SLMEMRFHIPISDS 171
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
+ P + F ++M A V + +A+ F I LTPRGRY +++ SF +L G
Sbjct: 172 A-----DQDPVEAFHQQVMDKASVISVSGDAIAIFREIHCLTPRGRYDIKIFQSFFQLHG 226
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI S+V+RLFLLP + TF VV+LDPPI++GQT Y ++VL F + EL
Sbjct: 227 KTFDYKIPMSTVLRLFLLPHKDSRQTFFVVSLDPPIKQGQTRYHYLVLLFNQEEETSIEL 286
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
+E+ L KY+DKL G +EV +++ + KIT PG F A+ S KA
Sbjct: 287 PFTEKELKEKYEDKLTKELTGPTYEVLGKVMKVIINRKITGPGHFLGHTKTPAIGCSFKA 346
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLE+ F ++ KPP I EEI V F R GG + FD I L + H F
Sbjct: 347 AAGYLYPLERGFIYVHKPPIHIRFEEIASVNFAR---GGGSTRSFDFEIELTSGVVHTFS 403
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEA---- 356
+I++ EY LFDFI+ K L++ N G D +D D +L R+K EA
Sbjct: 404 SIEKEEYGKLFDFITSKKLRVKNRGKTDKPKYDEDFGDSDQEDEPDAYLARVKAEAQERD 463
Query: 357 GGDESDEE----DSDFVADKDDG-------GSPTDDSGEEDSDASESGGEKEKPAKKESK 405
G + D E D DF ++D +P +EDSDASE+ +KEK KKE K
Sbjct: 464 GVENQDSEEGSTDEDFNPNQDVSDVAEEYDSNPNSSESDEDSDASEASHKKEKKEKKEKK 523
Query: 406 KESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPG 465
+S+ + +K+ + E KD N PKR + F+ + RE+IK NPG
Sbjct: 524 SKSAKTVSEKPRKQRKPKKE----------KDANKPKRPPTAFMLWLNSARESIKADNPG 573
Query: 466 IAFTDVGRVLGERWKKM 482
I T++ + GE W+++
Sbjct: 574 INVTEIAKKGGEMWREL 590
>gi|332025514|gb|EGI65677.1| FACT complex subunit Ssrp1 [Acromyrmex echinatior]
Length = 721
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 181/498 (36%), Positives = 265/498 (53%), Gaps = 35/498 (7%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F VG AFE+ L DVSQ GKN+V LEFH +D SLME+ FHIP S++
Sbjct: 101 VLSFDVGHHTAFEIPLYDVSQCNT-GKNEVTLEFHQNDDAPV----SLMEMRFHIPVSDS 155
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
+ P + F ++M A V + +A+ F I LTPRGRY +++ +F +L G
Sbjct: 156 V-----DQDPVEAFHQQVMDKASVISVSGDAIAIFREIHCLTPRGRYDIKIFQTFFQLHG 210
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI S+V+RLFLLP + F VV+LDPPI++GQT Y ++VL F + EL
Sbjct: 211 KTFDYKIPMSTVLRLFLLPHKDNRQMFFVVSLDPPIKQGQTRYHYLVLLFNQEEETSIEL 270
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
+E+ L KY+DKL G EV +++ + K+T PG F A+ S KA
Sbjct: 271 PFTEKELKEKYEDKLTKELSGPTFEVLGKVMKVIINRKLTGPGHFTGHTGTPAISCSFKA 330
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLE+ F ++ KPP I EEI + F R GG + FD I L + H F
Sbjct: 331 AAGYLYPLERGFIYVHKPPIHIRFEEIASLNFAR---GGGSTRSFDFEIELTSGVVHTFS 387
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEA---- 356
+I++ EY LFDFI+ K L++ N G + D +D D +L R+K EA
Sbjct: 388 SIEKEEYGKLFDFITAKKLRVKNRGKSDKPNYDEDFGDSDQEDEPDAYLARVKAEAQERD 447
Query: 357 GGDESDEE-----DSDFVADKDDG-------GSPTDDSGEEDSDASESGGEKEKPAKKES 404
G + D E D DF ++D+ +P E+ ++ S +++K K+
Sbjct: 448 GEENQDSEEEGSTDEDFNPNQDESDVAEEYDSNPNSSDSEDSDASAASHKKEKKDKDKKE 507
Query: 405 KKESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNP 464
KKE S A T +K R K++K KK++D N PKR S F+ + R++IK NP
Sbjct: 508 KKEKKSKSAKTISEKPR------KQRKSKKERDENKPKRPPSAFMLWLSSARDSIKADNP 561
Query: 465 GIAFTDVGRVLGERWKKM 482
G++ TD+ + GE W+++
Sbjct: 562 GLSITDIAKKGGEMWREL 579
>gi|307204835|gb|EFN83393.1| FACT complex subunit Ssrp1 [Harpegnathos saltator]
Length = 737
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 187/498 (37%), Positives = 266/498 (53%), Gaps = 40/498 (8%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F VG AFE+ L DVSQ GKN+V LEFH +D SLME+ FHIP S++
Sbjct: 117 VLSFDVGHHTAFEIPLYDVSQCN-TGKNEVTLEFHQNDDAPV----SLMEMRFHIPVSDS 171
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
+ P + F ++M A V + +A+ F+ I LTPRGRY +++ +F +L G
Sbjct: 172 A-----DQDPVEAFHQQVMEKASVISVSGDAIAIFKEIYCLTPRGRYDIKIFQTFFQLHG 226
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI S+V+RLFLLP + + VV+LDPPI++GQT Y ++VL F+ + EL
Sbjct: 227 KTFDYKIPMSAVLRLFLLPHKDNRQMYFVVSLDPPIKQGQTRYHYLVLLFKQEEETFIEL 286
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
+E+ L KY+DKL G +EV +++ + K+T PG F A+ S KA
Sbjct: 287 PFTEKELKEKYEDKLTKELAGPTYEVLGKVMKVIINRKLTGPGHFTGHTGTPAIGCSFKA 346
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLE+ F ++ KPP I EEI V F R GG + FD I L + H F
Sbjct: 347 AAGYLYPLERGFIYVHKPPIHIRFEEIASVNFAR---GGGSTRSFDFEIELTSGVVHTFS 403
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEA---- 356
+I++ EY LFDFI+ K L++ N G + D +D D +L R+K EA
Sbjct: 404 SIEKEEYGKLFDFITLKKLRVKNRGKSDKLNYDQDFGDSDQEDEPDAYLARVKAEAQERD 463
Query: 357 GGDESDEE----DSDF--------VADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKES 404
G + D E D DF VA++ D + DSG EDSDAS + +KEK KKE
Sbjct: 464 GEENQDSEEGSTDEDFNPNQDESDVAEEYDSNPNSSDSG-EDSDASAASHKKEKKEKKEK 522
Query: 405 KKESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNP 464
K +S+ +K + E KD N PKR + F+ + RE+IK NP
Sbjct: 523 KSKSAKTVPEKPRKPRKSKKE----------KDTNKPKRPPTAFMLWLNNARESIKADNP 572
Query: 465 GIAFTDVGRVLGERWKKM 482
GIA T++ + GE W+++
Sbjct: 573 GIAVTEIAKKGGEMWREL 590
>gi|427788863|gb|JAA59883.1| Putative nucleosome-binding factor spn pob3 subunit [Rhipicephalus
pulchellus]
Length = 734
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 176/505 (34%), Positives = 274/505 (54%), Gaps = 40/505 (7%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIP---N 57
+L+F V + A+E+ LA+VS KN+V LEFH +D SLME+ FHIP N
Sbjct: 117 VLSFDVDKHSAYEIPLANVSHCTT-AKNEVTLEFHQNDDAAV----SLMELRFHIPTDPN 171
Query: 58 SNTQFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLR 117
S T P Q FR+ ++S A + +A+VTF+ + LTPRGRY +++ SF++
Sbjct: 172 SETD--------PIQAFRNNVLSKASIIQATGDAMVTFKELQCLTPRGRYDIKIFPSFIQ 223
Query: 118 LQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQ 177
L G+ D+KI ++V+RLFLLP + F V++LDPPI++GQT Y ++L F +
Sbjct: 224 LHGKTFDYKIPLTTVLRLFLLPHKDNRQVFFVLSLDPPIKQGQTRYHFLILLFNKEEDTS 283
Query: 178 SELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSS 237
EL +S+ + K++DKL+ + G EV + +++ + KIT PG F+ + S
Sbjct: 284 IELALSDADIQEKFEDKLQKNMSGPTFEVISRVMKAVVQRKITVPGNFKGHGGTNCITCS 343
Query: 238 LKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEH 297
+A +G+LYPLE+ F ++ KPP I +EI V F R +GGS FD + K+ H
Sbjct: 344 YRAGNGLLYPLERGFIYIHKPPVHIRFDEISCVNFAR--SGGST-RSFDFEVEAKSGLVH 400
Query: 298 LFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVA-----AVLQEDDDDAVDPHLERI 352
F +I++ EY LFD++S K L+I N G + T ++ D +DA D +L R+
Sbjct: 401 TFSSIEKEEYGRLFDYVSEKKLRIKNRGTLGGTKEKPNYNDDELIDSDAEDAPDAYLARV 460
Query: 353 KNEAGGDESDEEDSDFVADK--DDGGSPTDDSGEEDSDA----------SESGGEKEKPA 400
K+E G + DE DSD +D+ + G S ++ + E DS+ G +
Sbjct: 461 KDE--GRQRDEGDSDESSDESFNPGESGSEVAEEFDSNVESSSDSDAGSGGGKGGSGSDS 518
Query: 401 KKESKKESSSVKASTSKKKSRDGDEDG--KKKKQKKKKDPNAPKRAMSGFIFFSQMEREN 458
E +++ K + ++ E G K ++ KK++D N PKR S + + RE
Sbjct: 519 GSEKREKPKKEKKEKKSRSAKTVKEPGMRKPRRPKKERDANKPKRPPSAYFLWLAENREK 578
Query: 459 IKKSNPGIAFTDVGRVLGERWKKMS 483
IKK NPG + TDV + GE WK+++
Sbjct: 579 IKKDNPGFSITDVTKRAGELWKEVT 603
>gi|432878236|ref|XP_004073283.1| PREDICTED: FACT complex subunit SSRP1-like [Oryzias latipes]
Length = 706
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 184/520 (35%), Positives = 279/520 (53%), Gaps = 32/520 (6%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F V AFE+ L++VSQ GKN+V LEFH +D T SLME+ F++P S
Sbjct: 118 LLSFDVNDNTAFEIPLSNVSQCA-TGKNEVTLEFHQNDDTEV----SLMEVRFYVPPSQ- 171
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
DE + F ++S ADV +AV F+ + LTPRGRY + ++ +FL L G
Sbjct: 172 ---ADERQESVEAFAQNVLSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPTFLHLHG 228
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F + + L
Sbjct: 229 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEEDINLTL 288
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
M+E+ + +++ KL + G ++EV + +++ L KIT PG F+ + S KA
Sbjct: 289 NMNEDDVERRFEGKLNKNMSGSLYEVVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKA 348
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP + EEI V F A G + + I HL
Sbjct: 349 SSGLLYPLERGFIYVHKPPVHLRFEEISCVNF---ARGTTTTRGGTVSIYCHPGYPHL-S 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLG--DMKTTDGVAAVLQEDDDDAVDPHLERIKNEAG- 357
+ R EY LFDF++ K L I N G + K G + D+D D +LER+K E
Sbjct: 405 LLFREEYGKLFDFVNAKKLNIKNRGFKEKKGMKGKIDDYSDSDEDKHDAYLERMKAEGKI 464
Query: 358 ---GDESDEEDSDFVADKDDGGSPTDDSGEEDSDASE-----SGGEKEKPAKKESKKESS 409
G++SDE D A+ D+ +P GEED D +E + +S+ ESS
Sbjct: 465 REEGNDSDESD----AESDESFNP----GEEDDDIAEEYDSNASASDSSDEGDDSEDESS 516
Query: 410 SVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFT 469
K K + ++ K +K+KK+KD PKR MS ++ + RE IK NPGI+ T
Sbjct: 517 KKKKPKKVVKEKKERKERKPRKEKKQKDAGGPKRPMSAYMLWLNSSRERIKAENPGISIT 576
Query: 470 DVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
++ + GE W+ + +E+E +++KA K++Y YK
Sbjct: 577 EISKKAGEMWRGLGKDEKEEWDTKAGEAKRQYDKAKKEYK 616
>gi|195489309|ref|XP_002092681.1| GE11532 [Drosophila yakuba]
gi|194178782|gb|EDW92393.1| GE11532 [Drosophila yakuba]
Length = 726
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 188/520 (36%), Positives = 270/520 (51%), Gaps = 27/520 (5%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F K FEV L+ VSQ + GKN+V LEFH +D L+E+ FHIP
Sbjct: 118 VLSFDKESKTIFEVPLSHVSQC-VTGKNEVTLEFHQNDDAPVG----LLEMRFHIPA--- 169
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P F +MS A V + E++ F I ILTPRGRY +++ +F +L G
Sbjct: 170 --VESAEEDPVDKFHQNVMSKASVISASGESIAIFREIQILTPRGRYDIKIFSTFFQLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI SV+RLF+LP + F V++LDPPI++GQT Y ++VL F D EL
Sbjct: 228 KTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLDPPIKQGQTRYHYLVLLFAPDEETTIEL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
SE L KY+ KLE G ++EV +++ L G KIT PG F AV S KA
Sbjct: 288 PFSEAELRDKYEGKLEKEISGPVYEVMGKVMKVLIGRKITGPGNFIGHSGTAAVGCSFKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLE+ F ++ KPP I EEI V F R +GGS FD + LK H+F
Sbjct: 348 AAGYLYPLERGFIYIHKPPLHIRFEEISSVNFAR--SGGST-RSFDFEVTLKNGTVHIFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEA---- 356
+I++ EY LFDFI+ K L + N+G K+ D+++ D +L R+K EA
Sbjct: 405 SIEKEEYAKLFDFITQKKLHVSNMGKDKSGYKDVDFGDSDNENEPDAYLARLKAEAREKE 464
Query: 357 ------GGDESDEEDSDFVADKDDGGSPTD-DSGEEDSDASESGGEKEKPAKKESKKESS 409
+ + D DF ++++ + DS E +S +KK
Sbjct: 465 EDDDDGDDSDEESTDEDFKPNENESDVAEEYDSNVESDSDDDSDASGGGGDSDGAKKRKE 524
Query: 410 SVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFT 469
KK+ + +++ KK KKK D PKRA + F+ + RE+IK+ NPGI T
Sbjct: 525 KKSEKKEKKEKKHKEKERTKKASKKK-DSGKPKRATTAFMLWLNDTRESIKRDNPGIKVT 583
Query: 470 DVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
++ + GE WK++ +++ +E A DK+RY DE+ YK
Sbjct: 584 EIAKKGGEMWKEL--KDKSKWEDAAAKDKQRYHDEMRNYK 621
>gi|118344004|ref|NP_001071827.1| FACT complex subunit SSRP1 [Ciona intestinalis]
gi|110287972|sp|Q4H2R2.1|SSRP1_CIOIN RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=Structure-specific recognition protein 1
gi|70571284|dbj|BAE06715.1| transcription factor protein [Ciona intestinalis]
Length = 704
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 175/519 (33%), Positives = 278/519 (53%), Gaps = 27/519 (5%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQ 61
+ F VGQK +FE+ L +VSQ Q K++V +EFH +D + SLME+ F IP S
Sbjct: 122 MMFQVGQKLSFEIPLNNVSQC-TQNKDEVTMEFHQNDDSEL----SLMEMRFFIPPSQ-- 174
Query: 62 FVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQ 121
DE + F D +M+ ADV A+ F+ + LTPRGRY + ++ F++L G+
Sbjct: 175 ---DEMIDKVKDFHDNVMAKADVLQVKGTAICVFQDLQCLTPRGRYDIRMYPKFIQLHGK 231
Query: 122 ANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELL 181
D+KI Y+S++RLFLLP +Q F VV+LDPP+++G T Y ++L F + + EL
Sbjct: 232 TFDYKITYTSILRLFLLPHKDQRQIFFVVSLDPPLKQGMTRYHFLILLFYKEDDLAVELS 291
Query: 182 MSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAE 241
+ ++ + ++ KL+ G ++EV + +++ L KIT PG F+ ++ + KA
Sbjct: 292 LPDDEIEERFGGKLQKDMSGPMYEVVSRVMKHLVQRKITVPGSFKGLNGVQSITCTYKAS 351
Query: 242 DGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMH-YFDLLIRLKTEQEHLFR 300
G L+PLE+ F ++ KPP I +EI YV F R G + ++ FD I +++ +F
Sbjct: 352 SGFLFPLERGFMYVHKPPVHIRFDEIAYVNFAR---GTTKINKSFDFEIETRSKNNFVFS 408
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDD---DAVDPHLERIKNEAG 357
NI+R++Y +L+DF+ K LKI N+G DG L D D D DP++ER+K EA
Sbjct: 409 NIERDQYASLYDFVHNKQLKIKNIG----KDGADFDLMVDSDEDADVHDPYMERMKQEAA 464
Query: 358 GDESDEEDSDFVADKDDGGSPTDDSGE------EDSDASESGGEKEKPAKKESKKESSSV 411
E +D D +DD P + E D ++ SG E+ E + E
Sbjct: 465 EREKQVDDDDDDESEDDDFQPETNVAEVEEEYNSDVGSASSGASDEEEEDGEEEVEEKPK 524
Query: 412 KASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDV 471
K K ++ K ++KKKDPNAPKR S + + R K N GI+ T++
Sbjct: 525 KRKKEKVMKERRQKETPGKVKRKKKDPNAPKRPQSAYFLWLNENRGRFKAENKGISVTEL 584
Query: 472 GRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYKN 510
++ G+ WKK+ +E++ +E + K ++ + YK+
Sbjct: 585 TKLAGKEWKKIDPDEKQKFERMYQKSKVKFDAAMKEYKS 623
>gi|241632349|ref|XP_002410341.1| structure-specific recognition protein, putative [Ixodes
scapularis]
gi|215503398|gb|EEC12892.1| structure-specific recognition protein, putative [Ixodes
scapularis]
Length = 730
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 178/499 (35%), Positives = 276/499 (55%), Gaps = 34/499 (6%)
Query: 1 MLTFMVGQKQ-AFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIP--- 56
+L+F + K A+E+ L +VS KN+V LEFH +D SLME+ FH+P
Sbjct: 117 VLSFDIDSKSSAYEIPLGNVSHCT-TAKNEVTLEFHQNDDAAV----SLMELRFHVPTDP 171
Query: 57 NSNTQFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFL 116
NS+T P Q FR+ ++S A++ E++VTF+ + LTPRGRY +++ SF+
Sbjct: 172 NSDTD--------PIQAFRNNVLSKANIIQATGESMVTFKELQCLTPRGRYDIKIFPSFI 223
Query: 117 RLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVV 176
+L G+ D+KI ++V+RLFLLP + F V++LDPPI++GQT Y ++L F +
Sbjct: 224 QLHGKTFDYKIPLTTVLRLFLLPHKDTRQVFFVLSLDPPIKQGQTRYHFLILLFNKEEET 283
Query: 177 QSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKS 236
EL MSEE + K++DK++ + G EV + +++ + KIT PG F +
Sbjct: 284 SIELTMSEEDIRDKFEDKIQKNMSGPTFEVISRVMKAVVQRKITVPGNFTGHGGTNCITC 343
Query: 237 SLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQE 296
S +A +G+LYPLE+ F ++ KPP + +EI V F R +GGS FD + K+
Sbjct: 344 SYRAGNGLLYPLERGFIYIHKPPVHLRFDEIACVNFAR--SGGST-RSFDFEVEAKSGLV 400
Query: 297 HLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDD------DDAVDPHLE 350
H F +I++ EY LFD++S K L+I N G + T +DD +DA D +L
Sbjct: 401 HTFSSIEKEEYGRLFDYVSDKKLRIKNRGSLGNTTKEKPNYNDDDLVDSDAEDAPDAYLA 460
Query: 351 RIKNEAGGDESDEEDSDFVADK--DDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKES 408
R+K+E G + DE DSD +D+ + G S ++ + E DS+ S+S +E K+
Sbjct: 461 RVKDE--GRQRDEGDSDESSDESFNPGESGSEVAEEFDSNVSDSSDSEEGGEKEAGGDGE 518
Query: 409 SSVKASTSKKKSRDGDEDG----KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNP 464
K K ++ E G +++K KK++D N PKRA S + + RE IK+ NP
Sbjct: 519 EKPKKEKKSKSAKTVREPGMGPPRRRKPKKERDENKPKRAPSAYFLWLAENREQIKRDNP 578
Query: 465 GIAFTDVGRVLGERWKKMS 483
G TD+ + GE WK ++
Sbjct: 579 GFGITDITKRAGELWKTVT 597
>gi|203465|gb|AAA40927.1| HMG box (bp. 1168..1428), partial [Rattus norvegicus]
Length = 561
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 171/489 (34%), Positives = 260/489 (53%), Gaps = 34/489 (6%)
Query: 33 EFHVDDTTGANEKDSLMEISFHIPNSNTQFVGDENHPPAQVFRDKIMSMADVGAGGEEAV 92
EFH +D SLME+ F++P + V P + F ++S ADV +A+
Sbjct: 1 EFHQNDDAEV----SLMEVRFYVPPTQEDGVD-----PVEAFAQNVLSKADVIQATGDAI 51
Query: 93 VTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTL 152
F + LTPRGRY + ++ +FL L G+ D+KI Y++V+RLFLLP +Q F V++L
Sbjct: 52 CIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVLRLFLLPHKDQRQMFFVISL 111
Query: 153 DPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILR 212
DPPI++GQT Y ++L F D + L M+EE + +++ +L + G ++E+ + +++
Sbjct: 112 DPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFEGRLTKNMSGSLYEMVSRVMK 171
Query: 213 GLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEF 272
L KIT PG F+ + S KA G+LYPLE+ F ++ KPP I +EI +V F
Sbjct: 172 ALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFIYVHKPPVHIRFDEISFVNF 231
Query: 273 ERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDG 332
R + FD I K ++ F +I+R EY LFDF++ K L I N G + +
Sbjct: 232 AR---ATTTTRSFDSEIETKQGTQYTFSSIEREEYGKLFDFVNAKKLNIKNRGLKEGINP 288
Query: 333 VAAVLQEDDDDAVDPHLERIKNEAGGDESDEEDSDFVADKDDGGSPTDDSGEE------- 385
+ D+D D +LER+K E E + DS DD G TD+S
Sbjct: 289 GYDDYADSDEDQHDAYLERMKEEGKIREENANDS-----SDDSGEETDESFNPGEEEEDV 343
Query: 386 ----DSDASESGGEKEKPAKKESKKESSSVKASTSK-KKSRDGDEDGKKKKQKKKKDPNA 440
DS+AS S E + +E KK +A +K +KSR K + KK KDPNA
Sbjct: 344 AEEFDSNASASSSSNEGDSDREEKKRKQLKRAKMAKDRKSR-----KKSSEGKKGKDPNA 398
Query: 441 PKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKR 500
PKR MS ++ + RE IK +PGI+ TD+ + GE WK MS E++E ++ K ++
Sbjct: 399 PKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKGEDARRE 458
Query: 501 YKDEISGYK 509
Y++ + Y+
Sbjct: 459 YEEAMKEYE 467
>gi|194885620|ref|XP_001976465.1| GG19998 [Drosophila erecta]
gi|190659652|gb|EDV56865.1| GG19998 [Drosophila erecta]
Length = 724
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 185/521 (35%), Positives = 273/521 (52%), Gaps = 31/521 (5%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F K FEV L+ VSQ + GKN+V LEFH +D L+E+ FHIP
Sbjct: 118 VLSFDKESKTIFEVPLSHVSQC-VTGKNEVTLEFHQNDDAPVG----LLEMRFHIPA--- 169
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P F +MS A V + E++ F I ILTPRGRY +++ +F +L G
Sbjct: 170 --VESAEDDPVDKFHQNVMSKASVISASGESIAIFREIQILTPRGRYDIKIFSTFFQLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI SV+RLF+LP + F V++LDPPI++GQT Y ++VL F D EL
Sbjct: 228 KTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLDPPIKQGQTRYHYLVLLFAPDEETTIEL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
SE L KY+ KLE G ++EV +++ L G KIT PG F AV S KA
Sbjct: 288 PFSEAELRDKYEGKLEKEISGPVYEVMGKVMKVLIGRKITGPGNFIGHSGTAAVGCSFKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLE+ F ++ KPP I EEI V F R +GGS FD + LK H+F
Sbjct: 348 AAGYLYPLERGFIYIHKPPLHIRFEEIGSVNFAR--SGGST-RSFDFEVTLKNGTVHIFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEA---- 356
+I++ EY LFDFI+ K L + N+G K+ D+++ D +L R+K EA
Sbjct: 405 SIEKEEYAKLFDFITQKKLHVSNMGKDKSGYKDVDFGDSDNENEPDAYLARLKAEAREKE 464
Query: 357 ------GGDESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSS 410
+ + D DF ++++ +D + E DS+ + + +S
Sbjct: 465 EDDDDGDDSDEESTDEDFKPNENE----SDVAEEYDSNVESDSDDDSDASGGDSDGAKKR 520
Query: 411 VKASTSKKKSRDGDEDGKKKKQKKKK--DPNAPKRAMSGFIFFSQMERENIKKSNPGIAF 468
+ + KK+ ++ K++ +K K D PKRA + F+ + RE+IK+ NPGI
Sbjct: 521 KEKKSEKKEKKEKKHKEKERTKKASKKKDSGKPKRATTAFMLWLNDTRESIKRDNPGIKV 580
Query: 469 TDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
T++ + GE WK++ +++ +E A DK+RY DE+ YK
Sbjct: 581 TEIAKKGGEMWKEL--KDKSKWEDAAAKDKQRYHDEMRNYK 619
>gi|253314412|ref|NP_001156579.1| structure specific recognition protein-like [Acyrthosiphon pisum]
Length = 755
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 181/518 (34%), Positives = 271/518 (52%), Gaps = 23/518 (4%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F +G AFE+ L +VSQ GKN+V LEFH +D T SL E+ FHIP++
Sbjct: 116 ILSFDIGNLTAFEIPLNNVSQCT-TGKNEVTLEFHQNDETPV----SLCEMRFHIPSA-- 168
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
+ GD++ P F D++M A V + +A+ F + LTPRGRY +++ +F +L G
Sbjct: 169 ELAGDQD--PVDAFHDQVMKQASVISISGDAIAIFREMQCLTPRGRYDIKVFQTFFQLHG 226
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI ++V+RLF+LP + F VV+LDPPI++GQT Y ++VL F + EL
Sbjct: 227 KTFDYKIPMTTVLRLFILPHKDGRQIFFVVSLDPPIKQGQTRYHYLVLLFNMEEETSIEL 286
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
++E + KY KL G + V +++ + KIT P F+ A+ S KA
Sbjct: 287 PFTDEEIEAKYAGKLTKEISGPTYGVLAQVMKAIVNRKITTPASFKGHSGTSAIGCSYKA 346
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G +YPLE+ F ++ KPP I EEI V F R GG + FD I LK H F
Sbjct: 347 AAGYVYPLERGFIYIHKPPIHIRFEEISSVNFAR---GGGSTRSFDFEIELKNGVIHTFS 403
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDA-VDPHLERIKNEAGGD 359
+I++ EY +L+DFI+ K L++ N G + D +A D +L R+K E G
Sbjct: 404 SIEKEEYGSLYDFINAKKLRVKNTGKSDKPAYTGDDYGDSDKEAEPDAYLARVKRE--GQ 461
Query: 360 ESDEEDSDFVADK-----DDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSSVKAS 414
E DE+D D + + G +D + E DS+ S + E K+ +
Sbjct: 462 ERDEDDDDDSDESTDEDFNPEGQESDVAEEFDSNPSTTESESGNEEGGGGDKKKEKKEKK 521
Query: 415 TSK---KKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDV 471
K ++ E +K K+ KK D PKRA + ++ + RE IK NPGI+F D+
Sbjct: 522 KKDKKPKSAKTISEKPRKSKKSKKPDDGRPKRAATAYMIWFNEAREEIKSDNPGISFVDI 581
Query: 472 GRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
+ GE WKKMS ++ YE KA K+ Y + + +K
Sbjct: 582 AKKGGELWKKMSTSDKSKYEEKAAKSKEEYIEAMKEFK 619
>gi|351712970|gb|EHB15889.1| FACT complex subunit SSRP1 [Heterocephalus glaber]
Length = 677
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 177/521 (33%), Positives = 276/521 (52%), Gaps = 38/521 (7%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F +G + FE+ L+ VSQ KN+V LEFH +D N + SL+E+ F++P S
Sbjct: 118 LLSFDIGDQPVFEIPLSSVSQCT-TSKNEVTLEFHQND----NPEVSLVEMHFYVPPSQ- 171
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
+E + F ++S AD +A+ F+ + LTPRGRY + ++ +FL L G
Sbjct: 172 ----EEGVDLVEAFAQNVLSKADAIRATVDAICIFQELQCLTPRGRYDIRIYPTFLHLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y +++ LFLLP+ +Q F V++LDPPI++GQT Y ++L F D + L
Sbjct: 228 KTFDYKIPYCTMLHLFLLPRKDQRQMFFVISLDPPIKQGQTCYHFLILLFSKDEDISLTL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
M+EE L +++ +L GL++EVF+ I++ L KIT PG F+ + S KA
Sbjct: 288 NMNEE-LEKRFEGQLTKDMSGLLYEVFSQIMKALVNCKITVPGNFQGHLGAQCITCSYKA 346
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ +PP I +EI +V F A G + +FDL I + + F
Sbjct: 347 GSGLLYPLEQGFVYIHRPPLHISFQEITFVSF---AHGIATTRFFDLDIETEQGTRYTFS 403
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
+IQ+ EY LFDFIS K L I + G + + + D+D D +LE++K E E
Sbjct: 404 SIQKEEYGKLFDFISAKKLNIKSQGLKEGKNLSYHKYTDADEDQHDAYLEKMKEEGKIRE 463
Query: 361 SDEEDSDFVADKDDGGSPTDDS-----------GEEDSDASESGGEKEKPAKKESKKESS 409
+ S DD G D+S E DS+AS S E + ++ K++
Sbjct: 464 ENANGSS-----DDLGEEMDESFYPGEEEEDVAEEFDSNASASSSSNEGESDQDEKEQKR 518
Query: 410 SVKASTSKKKSRDGDEDGKKK--KQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIA 467
KA +K D G KK + KK KDP+ P++ +S ++ + RE IK +PGI+
Sbjct: 519 LKKAKMAK------DPKGHKKTVEVKKGKDPSVPEQPLSAYVLWLNASREMIKSEHPGIS 572
Query: 468 FTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGY 508
++ + GE WK MS +E + KA + Y+ + Y
Sbjct: 573 IANLSKKAGEIWKGMSKTMKEEWGHKAEDVRLEYEKAVKEY 613
>gi|390363101|ref|XP_781828.3| PREDICTED: FACT complex subunit SSRP1-like [Strongylocentrotus
purpuratus]
Length = 703
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 176/528 (33%), Positives = 281/528 (53%), Gaps = 43/528 (8%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQ 61
L F V +K AF++ L +VS KN+VILEFH +D + + SLME+ F++P++
Sbjct: 118 LDFHVDKKSAFQLPLGNVSHAT-TAKNEVILEFHQND----DAEVSLMEMRFYVPST--- 169
Query: 62 FVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQ 121
D A F + +M+ AD+ +A+ + E I LTPRGRY +++ +FL+L G+
Sbjct: 170 ---DATTDAAGAFLENVMAKADIIQATGDAICSLEEIPCLTPRGRYDIKIFPTFLQLHGK 226
Query: 122 ANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELL 181
D+KI +++V+RLFLLP + F V++LDPPI +GQT Y ++L F + + EL
Sbjct: 227 TFDYKIPFTTVLRLFLLPHKDNRQMFFVMSLDPPIVQGQTRYHFLILSFNKEDTLALELN 286
Query: 182 MSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAE 241
++E+ L KY+ KL G + E+ + I++ L KIT PG F+ A+ +A+ S K+
Sbjct: 287 LTEDELEQKYEGKLTKEMSGPMFEIVSRIMKCLVARKITVPGNFKGAKGAHAISCSYKSN 346
Query: 242 DGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRN 301
G LYPLE+ F ++ KPP I +EI V F AG ++ YFD I + + +F +
Sbjct: 347 SGFLYPLERGFMYVHKPPMHIRFDEIQSVNF----AGTGSLRYFDFEIETRNKTTFVFSS 402
Query: 302 IQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDES 361
I++++Y LF ++S K L++ N G T + DD +A D +LE++K E E
Sbjct: 403 IEKDDYTPLFSYVSSKKLRVKNRGMKGDTVNYDDIGDSDDGNAHDAYLEQVKAEGREREE 462
Query: 362 DE-----------------EDSDFVADKDDGGSPTDDSGEEDSDASESGGEKE------- 397
E E + VA++ D T SG DSD + GE E
Sbjct: 463 GEIDENDSDSSSDEDFNPLESASDVAEEYDSNIETHTSG-SDSDYTAGSGEDEADDDNYM 521
Query: 398 ---KPAKKESKKESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQM 454
+ ++ ++E K+ +KK D +KK K++KD N PKR +G++ +
Sbjct: 522 KEREERRERKRQEKEKEKSKAKQKKRTKKSSDKPRKKVKQEKDANRPKRPTTGYMLWLND 581
Query: 455 ERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
+RE+IK+ PGI+ TD+ + GE W+K+ + + A KK Y+
Sbjct: 582 QREDIKEQFPGISVTDLTKKAGEMWQKLGDTGKAKWNEIAGEKKKEYE 629
>gi|412985385|emb|CCO18831.1| CG4797 [Bathycoccus prasinos]
Length = 669
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 176/512 (34%), Positives = 264/512 (51%), Gaps = 38/512 (7%)
Query: 4 FMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFV 63
F V +K +FEV+ ++ GKND+I+E KD+L+E++F++P + +
Sbjct: 147 FEVNEKCSFEVNANAIAGVNPIGKNDLIVEMQQGKENEKQSKDALVEMAFYVPLTAETWA 206
Query: 64 GDENHPPA----QVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQ 119
G++ Q I ++A G E V FE ++ PRG+ + LH +F+R+
Sbjct: 207 GEDVDDADDMAVQRLATAIDAIAATGPALGEPVCAFEDANLVVPRGKVTFALHPNFVRVT 266
Query: 120 GQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQ-- 177
G A DFKI Y+SV+R++ LPK N T VVV LDPPIRKGQT Y IV F D ++
Sbjct: 267 GSAADFKINYTSVLRVYALPKPNAHQTHVVVALDPPIRKGQTFYSFIVTVFNDDDIITVA 326
Query: 178 --------SELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQ 229
++ ++ E+ ++K +E Y G EVF +L+ ++G K+T+ G F S
Sbjct: 327 PRKPNKETDDIEITGEM-EERFK-AVEEEYTGAAGEVFARVLKAVAGVKLTRQGTFVSPA 384
Query: 230 DGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLI 289
G A++ S KA+ G+LY LE+ FF+LPKPP L+ +E++ EFERH G FDL +
Sbjct: 385 GGAAIRVSHKADVGLLYLLERGFFYLPKPPILVRYEDVSECEFERHGGGAGASKTFDLTL 444
Query: 290 RLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVD--- 346
K + F I R E+ NL +F++ KGL +G++ ++ EDD +D
Sbjct: 445 TTKKGLSYQFHGISRTEFQNLVNFLTAKGLP---MGEVDANALADRLIDEDDMAGIDDAG 501
Query: 347 PHLERIKNEAGGDESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKK 406
P LER G + DE+ + K G DSD E + +S
Sbjct: 502 PDLER------GSDEDEDSEEDEDFK----------GASDSDGGEPTDSSSSESDSDSDS 545
Query: 407 ESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGI 466
+ K KK + K+KK+KDPNAPKR +S ++ FS R +K+ NP
Sbjct: 546 DGGGGKKKKPAKKKAKTNSGSPHAKKKKEKDPNAPKRPLSTYMIFSAEMRAKVKEENPDF 605
Query: 467 AFTDVGRVLGERWKKMSVEEREPYESKARADK 498
+ TDV + LG RWK ++ EE+ YE A+ DK
Sbjct: 606 SITDVAKELGVRWKSVTDEEKVKYEELAKKDK 637
>gi|402591482|gb|EJW85411.1| FACT complex subunit SSRP1-A [Wuchereria bancrofti]
Length = 684
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 182/525 (34%), Positives = 266/525 (50%), Gaps = 44/525 (8%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L F V K FE+ L VS GK++ LEFH +D SLME+ FHIP T
Sbjct: 117 VLEFEVDDKPCFEIPLNTVSNC-TAGKSEAALEFHQNDDCSV----SLMEMRFHIP---T 168
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
DE+ P + FR +M A + ++ V + I TPRGRY ++++ ++L L G
Sbjct: 169 DPDADEDVDPVEEFRRAVMQYAGIETETDQPVAILQQILCTTPRGRYDIKVYQNYLSLHG 228
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI +++RLFLLP + H + V++L+PPIR+GQT Y +VL+F D V +L
Sbjct: 229 KTYDYKIPIRTIMRLFLLPHKDGRHMYFVISLNPPIRQGQTRYHFLVLEFSKDEEVDLDL 288
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
++ E L +YK KLE G + EV + I R + KIT PG F AV + K
Sbjct: 289 GLTSEQLKEQYKGKLEKRMSGTVFEVVSKIFRVMVDMKITVPGSFVGHSGTPAVMCAHKQ 348
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLEK F ++ KPP I EEI V F R + FD I +K +F
Sbjct: 349 ASGFLYPLEKGFVYVHKPPMYIRFEEISCVNFARSDVSTRS---FDFEIEMKGGSLLIFN 405
Query: 301 NIQRNEYHNLFDFISGKGLKIMN---LGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAG 357
++++ EY+ LFDF++ K L+I N L T+ + D D+ +DP+ E +K EA
Sbjct: 406 SVEKEEYNRLFDFVNNKHLRIKNAKRLDKPTYTENLG-----DSDEELDPYKETLKQEAR 460
Query: 358 GDESDEEDS---------DFVADKDDGGSPTDDSGEE-----DSDASESGGEKEKPAKKE 403
E+ E D D D S ++DSG E DSDA++S E
Sbjct: 461 NKEAAESDDDTDSEDHDYDLEEDLKKKHSSSEDSGSEPDEEYDSDAAQSS---------E 511
Query: 404 SKKESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSN 463
S K S KK +++KKKKDPNAPK+ S + + + KK
Sbjct: 512 SDSGDHKRKKSPKPKKKDLLKSSKGSRREKKKKDPNAPKKPQSAYFIWFGENYSSFKKE- 570
Query: 464 PGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGY 508
G++ T+ + G+ WK++ E ++ YE +A+ DK+RY E+ Y
Sbjct: 571 -GVSVTEAAQRAGKMWKEIDEETKKKYEERAKEDKERYAREMKEY 614
>gi|196010223|ref|XP_002114976.1| hypothetical protein TRIADDRAFT_64155 [Trichoplax adhaerens]
gi|190582359|gb|EDV22432.1| hypothetical protein TRIADDRAFT_64155 [Trichoplax adhaerens]
Length = 694
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 171/522 (32%), Positives = 286/522 (54%), Gaps = 52/522 (9%)
Query: 11 AFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFVGDENHPP 70
+E+ L +V ++ + GKN+V LEFH D + + SLME+ FH+P +N + DE++
Sbjct: 129 TYEIPLNEVCRSTV-GKNEVTLEFHQHD----DAQVSLMEMRFHLPATNNE---DEDY-- 178
Query: 71 AQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYS 130
Q F +K+++ A + +A+ F ++ LTPRGRY+++L +F++L G+ D+KI +
Sbjct: 179 VQTFNEKVLAKATIIQATGDAIAEFTEVSCLTPRGRYNIKLFPTFIQLHGKTYDYKIALT 238
Query: 131 SVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTK 190
S++R+FLLP ++ H F V TLDPP+++GQT YP ++QF + + +L +S+E LN K
Sbjct: 239 SILRMFLLPHPDERHFFFVFTLDPPLKQGQTRYPFFIIQFIKEEEISFDLNLSQEELNQK 298
Query: 191 YKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEK 250
Y +K+ + +G I+E+F+ +L+ L+ KIT PG F + +V S K G LYPL +
Sbjct: 299 YANKVNKTMEGPIYEIFSRLLKALTDRKITLPGAFIGSTKSSSVSCSHKNSSGFLYPLSR 358
Query: 251 SFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNL 310
F ++ KPP I +EI V F R +GG + FD + K + F NI +++Y L
Sbjct: 359 GFIYVHKPPVHIRPDEIVCVNFAR-VSGGGTIKTFDFEVITKNSVIYTFSNIDKSDYTPL 417
Query: 311 FDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDES--------- 361
+D+ L I N G +K +L +D+D D +L R+K E G+E
Sbjct: 418 YDYTKKNNLPIKNKG-LKRQSHKDELLDSEDEDDQDHYLARVKAE--GEEKTTMAEEGEE 474
Query: 362 -------------DEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEK--PAKKESKK 406
DE + +A++ D TD DSD E+ G+++K P +E +
Sbjct: 475 SDSTDDEDEDFNPDESSDNSIAEEYD----TDAINSSDSDYEENQGKRKKAIPVPREFR- 529
Query: 407 ESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGI 466
+ KK++ +E KK K +DPN PKR +SG++ + Q +R+ IK NP
Sbjct: 530 ---------AGKKAKKKNEVKPAKKVKNARDPNLPKRPLSGYMLWLQKQRDRIKNENPSF 580
Query: 467 AFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGY 508
+V + GE WK + EE++ + +++ K++Y +++ Y
Sbjct: 581 TVAEVAKKAGEIWKSLKEEEKKKWNNESAKLKEQYNKDMAEY 622
>gi|357608069|gb|EHJ65806.1| hypothetical protein KGM_13851 [Danaus plexippus]
Length = 719
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 188/531 (35%), Positives = 275/531 (51%), Gaps = 44/531 (8%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F VG AFE+ L +VSQ GKN+V LEFH +D T SLME+ FHIP S
Sbjct: 117 VLSFNVGSNTAFEIPLHNVSQCN-TGKNEVTLEFHQNDDTPV----SLMEMRFHIPTS-- 169
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
+ GD + F ++M+ A V + +A+ F + LTPRGRY +++ +F +L G
Sbjct: 170 ELAGDMD--AVDAFHQQVMNKASVISVSGDAIAIFRELQCLTPRGRYDIKVFQTFFQLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI S+V+RLFLLP + F VV+LDPPI++GQT Y ++VL F + EL
Sbjct: 228 KTFDYKIPMSTVLRLFLLPHKDTRQMFFVVSLDPPIKQGQTRYHYLVLLFGIEEETSLEL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
+EE L KY+ K+ G +EV I++ + ++T PG F A+ S KA
Sbjct: 288 PFTEEDLKEKYEGKITKELSGPTYEVLAKIMKVIINRRVTGPGDFLGHHKTPAIACSYKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLEK F ++ KPP I EEI V F R G S+ FD I LK+ H F
Sbjct: 348 AAGYLYPLEKGFIYVHKPPVHIRFEEIASVNFAR--GGASSTKSFDFEIELKSGSVHTFS 405
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEA---- 356
+I++ EY LFD+I+ K L + N G D + D +L R+K EA
Sbjct: 406 SIEKGEYDKLFDYITSKKLHVKNTGKNDKALYDDDFGDSDTEKEPDAYLARVKAEAEERD 465
Query: 357 ------------GGDESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKES 404
D++ E D VA++ D T+ S EDSDAS G+ +K KKE
Sbjct: 466 VDDSDESTDEDFNPDKAKESD---VAEEYD----TNPSSSEDSDASGGSGDSKKEKKKEK 518
Query: 405 KKESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNP 464
K + + + +K+ +K +K++KD NAPKR + F+ + R+ I NP
Sbjct: 519 KPKKTITISEQPRKRK--------EKSKKREKDVNAPKRPSTAFMLWLSEHRKGIIDDNP 570
Query: 465 GIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYKNPKPMD 515
GI T++ + GE W+ + +++ +E KA K+ Y + YK+ D
Sbjct: 571 GIKVTEIAKKGGELWRDL--KDKTQWEEKANKAKEEYNQAMKKYKDSGAAD 619
>gi|156553871|ref|XP_001600877.1| PREDICTED: FACT complex subunit Ssrp1-like [Nasonia vitripennis]
Length = 735
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 187/501 (37%), Positives = 265/501 (52%), Gaps = 44/501 (8%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F VG AFE+ L DVSQ GKN+V LEFH +D SLME+ FHIP S+T
Sbjct: 117 VLSFDVGHHTAFEIPLYDVSQCT-TGKNEVTLEFHQNDDAPV----SLMEMRFHIPVSDT 171
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
+ P F ++M A V + +A+ F I LTPRGRY +++ SF +L G
Sbjct: 172 S-----DQDPVDQFHKEVMEKASVISVSGDAIAIFREIQCLTPRGRYDIKVFQSFFQLHG 226
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI S+V+RLFLLP + F VV+LDPPI++GQT Y ++VL F + EL
Sbjct: 227 KTFDYKIPMSTVLRLFLLPHKDNRQMFFVVSLDPPIKQGQTRYHYLVLLFNQEEETSIEL 286
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
SE+ L KY+DKL G +EV +++ + K+T PG F+ A+ S KA
Sbjct: 287 PFSEKELKEKYEDKLTKELSGPTYEVLGKVMKVIINRKLTGPGSFQGHSGTPAIGCSFKA 346
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLE+ F ++ KPP I EEI V F R GG + FD I L T H F
Sbjct: 347 AAGYLYPLERGFIYVHKPPIHIRFEEISSVNFAR---GGGSTRSFDFEIELTTGVVHTFS 403
Query: 301 NIQRNEYHNLFDFISGKGLKIMNL--GDMK-TTDGVAAVLQEDDDDAVDPHLERIKNEAG 357
+I++ EY L+DFI+ K L++ N GD D QED+ DA +L R+K EA
Sbjct: 404 SIEKEEYGKLYDFINSKKLRVKNSSKGDKPGYNDDFGNSDQEDEPDA---YLARVKAEAK 460
Query: 358 GD----------------ESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAK 401
+ E+SD + D + T DS D+D++ SGG + K
Sbjct: 461 ERDDDDDDDEDESTDEDFKPTAEESDVAEEYDSNPNDTSDS---DADSNASGGSGKMEKK 517
Query: 402 KESKKESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKK 461
++ +K+ K++ + +K R K +K KK+KD N PKR S ++ + RE IK
Sbjct: 518 EKKEKKEKKSKSAKTSEKPR------KPRKSKKEKDENKPKRPASAYMLYLNSVREEIKA 571
Query: 462 SNPGIAFTDVGRVLGERWKKM 482
PG+ T+V + GE WK++
Sbjct: 572 KYPGLKVTEVVQKGGEMWKEL 592
>gi|405963576|gb|EKC29138.1| FACT complex subunit SSRP1 [Crassostrea gigas]
Length = 757
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 193/531 (36%), Positives = 284/531 (53%), Gaps = 38/531 (7%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQ 61
L F V K FEV L+ VS T K +V LEFH +D SLME+ FHIP
Sbjct: 119 LEFDVDNKIGFEVPLSHVSHTT-TAKQEVTLEFHPNDDAAV----SLMELRFHIPPDPK- 172
Query: 62 FVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQ 121
D Q F + ++ AD+ +A+ F + LTPRGRY +++ +FL+L G+
Sbjct: 173 ---DTEKDLVQEFYNNVLEKADIIQATGDALAVFTEVQCLTPRGRYDFKMYNTFLQLHGK 229
Query: 122 ANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELL 181
D+KI Y++V+RLFLLP + F V++LDPPI++GQT Y +L F D + EL
Sbjct: 230 TFDYKIPYTTVLRLFLLPHKDGRQMFFVISLDPPIKQGQTRYHFCILLFNIDDEMSIELG 289
Query: 182 MSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAE 241
+S+E L KY +KL+ G +EV + + + ++ KIT PG F S +++ S KA
Sbjct: 290 ISDEDLQEKYDNKLQKEMSGAEYEVISRVFKAVTNRKITVPGSFFSNTKSHSISCSYKAA 349
Query: 242 DGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRN 301
G LYPLE+ F F+ KPP I +E+ V F R A G+N FD + K+ + F
Sbjct: 350 TGFLYPLERGFIFVHKPPIHIRFDEVVTVNFARSA--GTNRS-FDFDVETKSGTTYTFVG 406
Query: 302 IQRNEYHNLFDFISGKGLKIMNL---GD-MKTTDGVAAVLQEDDDDAVDPHLERIKNEAG 357
I+++EY L+DF+S K L++ N+ GD D ++ +ED+ DA +LER+K E
Sbjct: 407 IEKDEYGKLYDFVSSKKLRVKNINGKGDKAPYRDDMSGSDEEDNHDA---YLERMKAEGK 463
Query: 358 GDES----------------DEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAK 401
+S +E SD VA++ D PT S E D+S G++EK K
Sbjct: 464 DRQSGDEDDDSDSSDESYNPNESASD-VAEEYDSNPPTTSSNSESGDSSGGSGDEEKQKK 522
Query: 402 KESKKESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKK 461
++ K E +++ + ++ G E KKKK+K KKDPNAPKR S + + RE +KK
Sbjct: 523 RKEKAEKKKSRSAKTVREKLPGSE--KKKKKKSKKDPNAPKRPQSAYFLWFNANREELKK 580
Query: 462 SNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYKNPK 512
P I+ TD+ + GE WK+M ++ + KA KK Y+ + YK K
Sbjct: 581 DTPDISITDLSKKAGEVWKQMEDTDKTEWNEKAAEAKKEYEKAMEEYKAKK 631
>gi|443684506|gb|ELT88434.1| hypothetical protein CAPTEDRAFT_172235 [Capitella teleta]
Length = 734
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 176/520 (33%), Positives = 271/520 (52%), Gaps = 36/520 (6%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQ 61
L F+V K AFE+ L +VS K++V +EFH +D SLME+ FHIP
Sbjct: 119 LDFIVENKSAFELPLGNVSHCA-TAKSEVTIEFHQNDDAAV----SLMELRFHIPPD--- 170
Query: 62 FVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQ 121
+ + P Q F +MS AD+ +A+ TF + LTPRGRY ++L+ +FL+L G+
Sbjct: 171 --ANPENDPVQDFYTSVMSKADIIQATGDAICTFNEVQCLTPRGRYDIKLYPTFLQLHGK 228
Query: 122 ANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELL 181
D+KI Y++++RLFLLP + F VV+LDPPI++GQT Y ++L F TD + E+
Sbjct: 229 TFDYKIPYTTILRLFLLPHRDGRQKFFVVSLDPPIKQGQTRYHFVILLFNTDDEITLEMG 288
Query: 182 MSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAE 241
+SE+ + KY+ KL G +E+ + I++ L KIT PG F +++ S KA
Sbjct: 289 LSEDDIQEKYEGKLNKVMSGPEYEIISRIMKTLVQRKITVPGSFIGNTGTHSIACSYKAA 348
Query: 242 DGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRN 301
G LYPLE+ F F+ KPP I +E+ V F R + N FD + K ++ F +
Sbjct: 349 TGFLYPLERGFIFVHKPPVHIRFDEVGTVNFARSSG---NTRSFDFDVETKMGTQYTFSS 405
Query: 302 IQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDES 361
++++EY L+DF++ K L++ N+G + D+D D ++ER+K E
Sbjct: 406 MEKDEYGKLYDFVTNKKLRVKNIGGKLDKVKYNEDMSGSDEDDHDAYMERMKAEG----- 460
Query: 362 DEEDSDFVADKD-------------DGGSPTDDSGEEDSDASESGGEKEKPAKKESKKES 408
E+D DF D+D D P D E DS+ S + + +
Sbjct: 461 KEKDEDFQLDEDDDESEDEDFEPNLDMSEPDD---EFDSNISSTDSSNDDDDDSSESSKK 517
Query: 409 SSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAF 468
S K+K + +GKK+K+K K DPN PKR S + + RE IK NP
Sbjct: 518 SKKPKKEKKEKKKRTVPEGKKRKKKVKGDPNKPKRPQSAYFLWLNEMREEIKAENPDAGV 577
Query: 469 TDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGY 508
TD+ ++ G+RWK+++ + R +E A K+ Y+ + Y
Sbjct: 578 TDIAKLAGQRWKEVTDKTR--WEGLAVKAKESYEKAMEEY 615
>gi|393907418|gb|EFO24137.2| structure-specific recognition protein 1 [Loa loa]
Length = 685
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 180/524 (34%), Positives = 267/524 (50%), Gaps = 42/524 (8%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L F V K FE+ L VS GK++ LEFH +D SLME+ FHIP T
Sbjct: 117 VLEFEVDDKPCFEIPLNTVSNC-TAGKSEAALEFHQNDDCSV----SLMEMRFHIP---T 168
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
DE+ P + FR +M A + ++ V + I TPRGRY ++++ ++L L G
Sbjct: 169 DPDADEDVDPVEEFRRAVMQYAGIETETDQPVAILQQILCTTPRGRYDIKVYQNYLSLHG 228
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI +++RLFLLP + H + V++L+PPIR+GQT Y +VL+F D V +L
Sbjct: 229 KTYDYKIPIRTIMRLFLLPHKDGRHMYFVISLNPPIRQGQTRYHFLVLEFSKDEEVDLDL 288
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
++ E L +YK KLE G + EV + I R + KIT PG F AV + K
Sbjct: 289 GLTSEQLKEQYKGKLEKRMSGTVFEVVSKIFRVMVDMKITVPGSFVGHSGTPAVMCAHKQ 348
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLEK F ++ KPP I EEI V F R + FD I +K +F
Sbjct: 349 ASGFLYPLEKGFVYVHKPPMYIRFEEISCVNFARSDVSTRS---FDFEIEMKGGSLLIFN 405
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEA---- 356
++++ EY+ LFDF++ K L+I N + + D D+ +DP+ E +K EA
Sbjct: 406 SVEKEEYNRLFDFVNNKHLRIKNAKRLDKPTYAENLA--DSDEELDPYKETLKQEARNKE 463
Query: 357 ---GGDESDEEDSDFVADKD---------DGGSPTDDSGEEDSDASESGGEKEKPAKKES 404
DE+D ED D+ ++D + GS D+ + DS S GG + KK
Sbjct: 464 AAESDDETDSEDHDYDLEEDLKRKRSSTEESGSEPDEEYDSDSAQSSEGGSGDHKQKKSP 523
Query: 405 KKESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNP 464
K + + ST K +KKKKDPNAPK+ S + + + KK
Sbjct: 524 KSKKKDLSKSTKAAKR-----------EKKKKDPNAPKKPQSAYFIWFGENYSSFKKE-- 570
Query: 465 GIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGY 508
G++ T+ + G+ WK++ E ++ YE +A+ DK+RY E+ Y
Sbjct: 571 GVSVTEAAQKAGKMWKEIDEETKKKYEERAKEDKERYAREMKEY 614
>gi|348574311|ref|XP_003472934.1| PREDICTED: FACT complex subunit SSRP1-like [Cavia porcellus]
Length = 681
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 163/495 (32%), Positives = 258/495 (52%), Gaps = 33/495 (6%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F +G + FE+ L++VSQ KN+V LEFH D SL+E+ F++P +
Sbjct: 118 LLSFDIGSQSVFEIPLSNVSQCTT-AKNEVTLEFHQSDDVEV----SLVEMRFYVPPTQ- 171
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
+E Q F ++S ADV +A+ F+ + LTPRGRY + ++ +FL L G
Sbjct: 172 ----EEGVDLVQAFAQNVLSKADVIQATADAICIFQELQCLTPRGRYDIRIYPTFLHLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI +S V+ LFLLP +Q F V++LDPPI++GQT Y ++L F + + L
Sbjct: 228 KTFDYKISFSMVLHLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEENITLTL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
M+EE + +++ +L + G +EVF+ +++ L KIT PG F+ + S KA
Sbjct: 288 NMNEEEVEKRFEGQLTKTMVGSRYEVFSRVMKALVNHKITVPGNFQGHLGAKCIACSYKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP + EI V F R G + +FDL I K + F
Sbjct: 348 SSGLLYPLEQDFIYVHKPPVHVHFHEIACVNFAR---GITTTRFFDLEIETKQGTQFTFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
+IQ+ EY LFDFIS K L I N + + D++ D +LER+K E E
Sbjct: 405 SIQKEEYGKLFDFISAKKLNIKNQELKDGKNPKYRKYTDSDEELHDAYLERMKEEGKIRE 464
Query: 361 SDEEDSDFVADKDDGGSPTDDSGEE------------DSDASESGGEKEKPAKKESKKES 408
+ DS DD G D+S + DS+AS + + + +KE
Sbjct: 465 ENPNDSS-----DDLGEEMDESFKPGEEEEEEVAEEFDSNASTTSSFSNEGDSDQDEKEQ 519
Query: 409 SSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAF 468
++ + K ++D + K ++ KK KDP+ K+ + + + +E IK +PGI+
Sbjct: 520 KQLQRA---KTAKDHKDHKKTQEVKKNKDPSPHKKPTFAYTLWLKANQEKIKADHPGIST 576
Query: 469 TDVGRVLGERWKKMS 483
TD+ + + WK+MS
Sbjct: 577 TDLPKKADKMWKRMS 591
>gi|47215698|emb|CAG04782.1| unnamed protein product [Tetraodon nigroviridis]
Length = 669
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 177/529 (33%), Positives = 264/529 (49%), Gaps = 63/529 (11%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L F + + AFE+ L++VSQ GKN+V LEFH +D T + SLME+ F++P + T
Sbjct: 118 LLQFDINENTAFEIPLSNVSQCA-TGKNEVTLEFHQNDDT----EISLMEVRFYVPPNQT 172
Query: 61 QFVGDENHPPA----QVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFL 116
DE P Q F ++S ADV +AV F+ + LTPRGRY + ++ +FL
Sbjct: 173 ----DERQDPVEDSPQAFAQNVLSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPTFL 228
Query: 117 RLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVV 176
L G+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F + +
Sbjct: 229 HLHGKTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEENI 288
Query: 177 QSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKF----------- 225
L MSEE + +++ KL G ++E+ + +++ L KIT PG F
Sbjct: 289 NLALNMSEEDVERRFEGKLSKHMSGSLYEMVSRVMKALVNRKITVPGNFQGYVSNPANKT 348
Query: 226 -----------------------------RSAQDGYAVKSSLKAEDGVLYPLEKSFFFLP 256
RS + S KA G+LYPLE+ F ++
Sbjct: 349 LVWLGGVCVCVCVCVGGYLQAVFKCCSFFRSHSGAQCITCSFKASSGLLYPLERGFIYVH 408
Query: 257 KPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISG 316
KPP + EEI V F R G + FD I K ++ F +I+R EY LFDF++
Sbjct: 409 KPPVHLRFEEISCVNFAR---GTTTTRSFDFEIETKQGNQYTFSSIEREEYGKLFDFVNA 465
Query: 317 KGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDESDEEDSDFVADKDDGG 376
K L I N G + G + DDD D +LER+K E E + + + D+
Sbjct: 466 KKLNIKNRGFKEGMKGKIDEYSDSDDDQHDAYLERMKAEGKIREEGNDSDESDSGSDESF 525
Query: 377 SPTDDSGEEDSDASE---SGGEKEKPAKKESKKESSSVKASTSKKKSRDGDEDGKKKKQK 433
+P GEED D +E S ++ E K K K ++ K +K+K
Sbjct: 526 NP----GEEDDDIAEEYDSNASASDSSEDGDDSEDEGAKKKAKKVKVVKEKKERKPRKEK 581
Query: 434 KKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKM 482
K+KD PKR MS ++ + RE IK NPGI+ T++ + GE W+++
Sbjct: 582 KQKDAGGPKRPMSAYMLWLNSSRERIKSENPGISITEISKKAGEMWRQL 630
>gi|312074352|ref|XP_003139932.1| structure-specific recognition protein 1 [Loa loa]
Length = 682
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 179/521 (34%), Positives = 267/521 (51%), Gaps = 39/521 (7%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L F V K FE+ L VS GK++ LEFH +D SLME+ FHIP T
Sbjct: 117 VLEFEVDDKPCFEIPLNTVSNC-TAGKSEAALEFHQNDDCSV----SLMEMRFHIP---T 168
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
DE+ P + FR +M A + ++ V + I TPRGRY ++++ ++L L G
Sbjct: 169 DPDADEDVDPVEEFRRAVMQYAGIETETDQPVAILQQILCTTPRGRYDIKVYQNYLSLHG 228
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI +++RLFLLP + H + V++L+PPIR+GQT Y +VL+F D V +L
Sbjct: 229 KTYDYKIPIRTIMRLFLLPHKDGRHMYFVISLNPPIRQGQTRYHFLVLEFSKDEEVDLDL 288
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
++ E L +YK KLE G + EV + I R + KIT PG F AV + K
Sbjct: 289 GLTSEQLKEQYKGKLEKRMSGTVFEVVSKIFRVMVDMKITVPGSFVGHSGTPAVMCAHKQ 348
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLEK F ++ KPP I EEI V F R + FD I +K +F
Sbjct: 349 ASGFLYPLEKGFVYVHKPPMYIRFEEISCVNFARSDVSTRS---FDFEIEMKGGSLLIFN 405
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
++++ EY+ LFDF++ K L+I N + + D D+ +DP+ E +K EA E
Sbjct: 406 SVEKEEYNRLFDFVNNKHLRIKNAKRLDKPTYAENLA--DSDEELDPYKETLKQEARNKE 463
Query: 361 S----DEEDSDFVADKD---------DGGSPTDDSGEEDSDASESGGEKEKPAKKESKKE 407
+ DE D+D+ ++D + GS D+ + DS S GG + KK K +
Sbjct: 464 AAESDDETDNDYDLEEDLKRKRSSTEESGSEPDEEYDSDSAQSSEGGSGDHKQKKSPKSK 523
Query: 408 SSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIA 467
+ ST K +KKKKDPNAPK+ S + + + KK G++
Sbjct: 524 KKDLSKSTKAAKR-----------EKKKKDPNAPKKPQSAYFIWFGENYSSFKKE--GVS 570
Query: 468 FTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGY 508
T+ + G+ WK++ E ++ YE +A+ DK+RY E+ Y
Sbjct: 571 VTEAAQKAGKMWKEIDEETKKKYEERAKEDKERYAREMKEY 611
>gi|47086431|ref|NP_997967.1| structure specific recognition protein 1a [Danio rerio]
gi|33604076|gb|AAH56311.1| Structure specific recognition protein 1a [Danio rerio]
Length = 518
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 158/431 (36%), Positives = 232/431 (53%), Gaps = 31/431 (7%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F V FE+ L+ VSQ GKN+V +EFH +D + + SLME+ F++P NT
Sbjct: 118 LLSFDVSDSPVFEIPLSSVSQCA-TGKNEVTVEFHQND----DAEVSLMEVRFYVP-PNT 171
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
GD+ P + F I+S ADV +AV F+ + LTPRGRY + ++ +FL L G
Sbjct: 172 ---GDDGSDPVEAFAQNILSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPTFLHLHG 228
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F D + L
Sbjct: 229 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLAL 288
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
MSE+ + +Y+ KL + G ++E+ + +++ L KIT PG F+ + + KA
Sbjct: 289 NMSEDEVEKRYEGKLSKNMSGPLYEIVSRVMKALVNRKITVPGNFQGHSGSQCITCAYKA 348
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP + EEI V F R G + FD I K + F
Sbjct: 349 SSGLLYPLERVFIYVHKPPVHLRFEEISCVNFAR---GTTTTRSFDFEIETKQNNQFTFS 405
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
NI+R EY LFDF++ K L I N G + G A + D+D D +LER+K E E
Sbjct: 406 NIEREEYGKLFDFVNAKKLTIKNRGFKEGMKG-AEDYSDSDEDQHDAYLERMKEEGKIRE 464
Query: 361 SDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSSVKASTSKKKS 420
+ D D D+ +P GEED D E + S+ S S+
Sbjct: 465 EGDGSDDSEGDSDESFNP----GEEDDDVPE--------------EYDSNASVSDSEGDD 506
Query: 421 RDGDEDGKKKK 431
D +++GKKKK
Sbjct: 507 GDSEDEGKKKK 517
>gi|50417356|gb|AAH77083.1| Ssrp1b protein [Danio rerio]
Length = 543
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 144/393 (36%), Positives = 217/393 (55%), Gaps = 18/393 (4%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F V FE+ L+ VSQ GKN+V +EFH +D T SLME+ F++P +
Sbjct: 118 LLSFDVNDSPTFEIPLSSVSQCT-TGKNEVTVEFHQNDDTEV----SLMEVRFYVPPT-- 170
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
GDE P + F ++S ADV +AV F + LTPRGRY + ++ +FL L G
Sbjct: 171 --TGDEGSDPVEAFAQNVLSKADVIQATGDAVCIFRELQCLTPRGRYDIRIYPTFLHLHG 228
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F + + L
Sbjct: 229 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEETISLTL 288
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
M+E+ + +++ KL + G ++E+ + +++ L KIT PG F+ + S KA
Sbjct: 289 NMNEDEVERRFEGKLNKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKA 348
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP + EEI V F R G + FD I K ++ F
Sbjct: 349 SSGLLYPLERGFIYVHKPPVHLRFEEIACVNFAR---GTTTTRSFDFEIETKQGNQYTFS 405
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLG--DMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGG 358
+I+R EY LFDF++ K L I N G + K G + + D+D D +LER+K E
Sbjct: 406 SIEREEYGKLFDFVNAKKLSIKNRGFKEKKGMKGNDDMYSDSDEDQHDAYLERMKEEGKI 465
Query: 359 DESDEEDSDFVADKDDGGSPTDDSGEEDSDASE 391
E + D + D+ +P GEED D +E
Sbjct: 466 REEGNDSDDSEGESDESFNP----GEEDEDIAE 494
>gi|308238179|ref|NP_001184126.1| structure specific recognition protein 1 [Xenopus (Silurana)
tropicalis]
Length = 695
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 142/382 (37%), Positives = 215/382 (56%), Gaps = 21/382 (5%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F +G + AFE+ L++VSQ GKN+V LEFH +D + SLMEI F++P +
Sbjct: 118 LLSFDIGDQPAFELPLSNVSQCT-TGKNEVTLEFHQNDDSEV----SLMEIRFYVPPTQ- 171
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
D+ P + F ++S ADV +AV F + LTPRGRY + ++ +FL L G
Sbjct: 172 ----DDGGDPVEAFAQNVLSKADVIQATGDAVCIFRELQCLTPRGRYDIRIYPTFLHLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F D + L
Sbjct: 228 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDMTLTL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
MSEE + +++ KL+ + G ++E+ + +++ L KIT PG F+ + S KA
Sbjct: 288 NMSEEEVERRFEGKLKKNMSGCLYEMVSRVMKALVNRKITVPGNFQGHSGSQCITCSYKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP I +E++ V F R G + FD I K ++ F
Sbjct: 348 SSGLLYPLERGFIYVHKPPVHIRFDEVNCVNFAR---GTTTTRSFDFEIETKQGSQYTFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
+I+R EY LFDF++ K L I N G + + D+D D +LER+K E E
Sbjct: 405 SIEREEYGKLFDFVNAKKLSIKNRGLKEGMKPAYDDYADSDEDQHDAYLERMKEEGKIRE 464
Query: 361 SDEEDSDFVADKDDGGSPTDDS 382
+ AD D+ G TD+S
Sbjct: 465 N--------ADSDESGDETDES 478
>gi|226479042|emb|CAX73016.1| structure specific recognition protein 1 [Schistosoma japonicum]
Length = 679
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 172/566 (30%), Positives = 273/566 (48%), Gaps = 73/566 (12%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L F V AFEV L++V+ L KN++I EFH++D L E+ + P +
Sbjct: 117 VLEFSVKNAMAFEVPLSNVANATL-NKNEIIFEFHLNDEAEI----CLSEMRLYTPGTEA 171
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
G A + K+ AD+ + ++ F+ + L PRGRY V+L+ SF+ L G
Sbjct: 172 DREGK-----APIIYSKVTQKADIIQVTGDFLIEFKQLQCLQPRGRYDVKLYPSFIHLHG 226
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
++ DFK+ +++ RL +LP + F V LDPPI+ GQT Y ++ F+ D V E+
Sbjct: 227 KSFDFKVPKNTITRLMMLPHPDNRQIFFTVQLDPPIKHGQTRYHFVIFLFDKDSHVDLEM 286
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
+EE L ++ KL + G +EV + + L K+T PG F + G AV S KA
Sbjct: 287 AATEEWLQEQFNGKLARNISGPEYEVVARVFKILYDQKVTVPGSFSAKGGGCAVACSYKA 346
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F F+P+PP I +EI V+F R G FD + + H F
Sbjct: 347 SVGLLYPLERGFTFVPRPPISIRFDEIVTVQFSR---GTGAQRSFDFEVETRNGLTHTFT 403
Query: 301 NIQRNEYHNLFDFISGKGLKIMNL-GDMKTTDGVAAVLQEDDDDAVDPHLERIKNEA--- 356
+I+R+EYH+L+DF++ K L++ N+ + KT + D++ D ++E++K EA
Sbjct: 404 SIERDEYHHLYDFVTAKKLRVKNISSENKTITNPGDDVWSSSDESHDAYMEKVKTEARER 463
Query: 357 -----------------------GGDESDEEDSDFV------------------------ 369
G + ++E DS+
Sbjct: 464 TAEMDDDDDDDEDDEDFKPPESDGSELAEEYDSNVQTTTSEEDSEDNDEDDDDGDADGNG 523
Query: 370 ----ADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSSVKASTSKKKSRDGDE 425
A K D + D EE++D+ S E KP +K+ K+E K S +K
Sbjct: 524 NKNNARKKDKRDDSSDLDEEEADSLSSDVEP-KPKQKKLKEEP---KTSNRPRKDETKSS 579
Query: 426 DGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGI-AFTDVGRVLGERWKKMSV 484
+ KKQ+K KDPNAP R +S + + RE I KS G + +V + GE W+ M
Sbjct: 580 KRQTKKQEKPKDPNAPTRPLSAYFLWFNENREKIAKSLSGQNSVAEVAKAGGELWRNMDS 639
Query: 485 EEREPYESKARADKKRYKDEISGYKN 510
E + Y+S+ KK+Y++++ Y++
Sbjct: 640 ETKSTYQSRVDELKKKYQEDLRVYQS 665
>gi|49250826|gb|AAH74541.1| Ssrp1 protein, partial [Xenopus (Silurana) tropicalis]
Length = 629
Score = 254 bits (648), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 142/382 (37%), Positives = 215/382 (56%), Gaps = 21/382 (5%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F +G + AFE+ L++VSQ GKN+V LEFH +D + SLMEI F++P +
Sbjct: 118 LLSFDIGDQPAFELPLSNVSQCT-TGKNEVTLEFHQNDDSEV----SLMEIRFYVPPTQ- 171
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
D+ P + F ++S ADV +AV F + LTPRGRY + ++ +FL L G
Sbjct: 172 ----DDGGDPVEAFAQNVLSKADVIQATGDAVCIFRELQCLTPRGRYDIRIYPTFLHLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F D + L
Sbjct: 228 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDMTLTL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
MSEE + +++ KL+ + G ++E+ + +++ L KIT PG F+ + S KA
Sbjct: 288 NMSEEEVERRFEGKLKKNMSGCLYEMVSRVMKALVNRKITVPGNFQGHSGSQCITCSYKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP I +E++ V F R G + FD I K ++ F
Sbjct: 348 SSGLLYPLERGFIYVHKPPVHIRFDEVNCVNFAR---GTTTTRSFDFEIETKQGSQYTFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
+I+R EY LFDF++ K L I N G + + D+D D +LER+K E E
Sbjct: 405 SIEREEYGKLFDFVNAKKLSIKNRGLKEGMKPAYDDYADSDEDQHDAYLERMKEEGKIRE 464
Query: 361 SDEEDSDFVADKDDGGSPTDDS 382
+ AD D+ G TD+S
Sbjct: 465 N--------ADSDESGDETDES 478
>gi|170580208|ref|XP_001895163.1| structure-specific recognition protein 1 [Brugia malayi]
gi|158597991|gb|EDP35988.1| structure-specific recognition protein 1, putative [Brugia malayi]
Length = 689
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 183/530 (34%), Positives = 267/530 (50%), Gaps = 49/530 (9%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L F V K FE+ L VS GK++ LEFH +D SLME+ FHIP T
Sbjct: 117 VLEFEVDDKPCFEIPLNTVSNCT-AGKSEAALEFHQNDDCSV----SLMEMRFHIP---T 168
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
DE+ P + FR +M A + ++ V + I TPRGRY ++++ ++L L G
Sbjct: 169 DPDADEDVDPVEEFRRAVMQYAGIETETDQPVAILQQILCTTPRGRYDIKVYQNYLSLHG 228
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI +++RLFLLP + H + V++L+PPIR+GQT Y +VL+F D V +L
Sbjct: 229 KTYDYKIPIRTIMRLFLLPHKDGRHMYFVISLNPPIRQGQTRYHFLVLEFSKDEEVDLDL 288
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
++ E L +YK KLE G + EV + I R + KIT PG F AV + K
Sbjct: 289 GLTSEQLKEQYKGKLEKRMSGTVFEVVSKIFRVMVDMKITVPGSFVGHSGTPAVMCAHKQ 348
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLEK F ++ KPP I EEI V F R + FD I +K +F
Sbjct: 349 ASGFLYPLEKGFVYVHKPPMYIRFEEISCVNFARSDVSTRS---FDFEIEMKGGSLLIFN 405
Query: 301 NIQRNEYHNLFDFISGKGLKIMN---LGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAG 357
++++ EY+ LFDF++ K L+I N L T+ + D D+ +DP+ E +K EA
Sbjct: 406 SVEKEEYNRLFDFVNNKHLRIKNAKRLDKPTYTENLG-----DSDEELDPYKETLKQEAR 460
Query: 358 GDESDEE-------------DSDFVAD-KDDGGSPTDDSGEE-----DSDASESGGEKEK 398
E+ E D D D K S +++SG E DSDA++S
Sbjct: 461 NKEAAESDDDTDSEDRLWFYDYDLEEDLKKRKHSSSENSGSEPDEEYDSDAAQSS----- 515
Query: 399 PAKKESKKESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMEREN 458
ES K S KK K++KKKKDPNAPK+ S + + +
Sbjct: 516 ----ESDSGDHKRKKSPKPKKKDLSKSSKGSKREKKKKDPNAPKKPQSAYFIWFGENYAS 571
Query: 459 IKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGY 508
KK G++ T+ + G+ WK++ E ++ YE +A+ DK+RY E+ Y
Sbjct: 572 FKKE--GVSVTEAAQRAGKMWKEIDEETKKKYEERAKEDKERYAREMKEY 619
>gi|361123883|gb|EHK96027.1| putative FACT complex subunit POB3 [Glarea lozoyensis 74030]
Length = 438
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 152/430 (35%), Positives = 228/430 (53%), Gaps = 38/430 (8%)
Query: 11 AFEVSLADVSQTQLQGKNDVILEFHV---DDTTGAN---------------EKDSLMEIS 52
AFE+ ++++ T L GKN+V +EF + D TG N KD L+E+
Sbjct: 5 AFEIPYSEITNTNLAGKNEVAVEFSLPANGDDTGTNGSLGGARGKGKKAGAGKDQLVEMR 64
Query: 53 FHIPNSNTQ------------FVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAI 100
F+IP T+ GDE A +F D +M A++G + TF +
Sbjct: 65 FYIPGVTTKKEALEGDDAPSDAEGDEEQNAANLFYDTLMDKAEIGEVAGDTFATFLDVLH 124
Query: 101 LTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQ 160
LTPRGR+ ++++ + RL+G+ D+KIQY + + LPK ++ H + V LDPP+R+GQ
Sbjct: 125 LTPRGRFDIDMYENSFRLRGKTYDYKIQYEHIKKFMCLPKPDETHFMICVGLDPPLRQGQ 184
Query: 161 TLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKIT 220
T YP +V+QF+ D V +L M+EELL KY KLEP Y+ H+V T + RGL+ K+
Sbjct: 185 TRYPFLVMQFKKDEEVTIDLNMTEELLKEKYGGKLEPHYEQPFHQVVTAVFRGLAAKKVN 244
Query: 221 KPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGG 279
+P K F S Y +K S+KA +G LY LEK+F F+PKP T I E++ V F R
Sbjct: 245 QPAKDFSSHHGQYGIKCSIKASEGFLYCLEKAFMFVPKPATYISFEQVKTVVFSRVGGAV 304
Query: 280 SNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQE 339
S FD+ ++LK E F NI R E L DF K L++ N + T + A L+
Sbjct: 305 SASRTFDITVQLKEGGESQFSNINREEQKPLEDFFRIKQLRVKNEMEEDNTAILKAALRA 364
Query: 340 DDDDAVDPHLERIKNEAG--GDESDEEDSDFVADKD-----DGGSPTDDSGEEDSDASES 392
++ + D + + + G ++S+ +D DF +D D + S + SG ED D +
Sbjct: 365 EELQSSDEEVVAARADRGSAAEDSESDDEDFKSDSDSDVAEEFDSNHESSGSEDEDGGPA 424
Query: 393 GGEKEKPAKK 402
+E+P KK
Sbjct: 425 SDAEERPKKK 434
>gi|256080078|ref|XP_002576310.1| structure specific recognition protein [Schistosoma mansoni]
gi|350646026|emb|CCD59303.1| structure specific recognition protein,putative [Schistosoma
mansoni]
Length = 632
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 157/513 (30%), Positives = 260/513 (50%), Gaps = 16/513 (3%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L F V AFEV L++V+ L KN++I EFH++D + L E+ + P +
Sbjct: 117 VLEFSVKNAMAFEVPLSNVANAVL-NKNEIIFEFHLNDEA----EICLSEMRLYTPGTEA 171
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
G A K+ AD+ + + F+ + L PRGRY V+L+ SF+ L G
Sbjct: 172 DREGK-----APAIYSKVTQKADIIQVTGDFLAEFKQLQCLQPRGRYDVKLYPSFIHLHG 226
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
++ DFK+ +++ RL +LP + F V LDPPI+ GQT Y +V F+ D + E+
Sbjct: 227 KSYDFKVPKNTITRLMVLPHPDNRQIFFAVQLDPPIKHGQTRYHFVVSLFDKDSHINLEM 286
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
+E+ L ++ KL + G +EV + + L K+T PG F + G AV S KA
Sbjct: 287 AATEDWLQEQFNGKLTRNISGPEYEVVARVFKVLYDQKVTVPGSFSAKGGGCAVACSYKA 346
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F F+P+PP I +EI V+F R G FD + + H F
Sbjct: 347 SVGLLYPLERGFTFVPRPPISIRFDEIVAVQFSR---GTGAQRSFDFEVETRNGLTHTFT 403
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
+I+R+EYH+L+DF++ K L++ N+ T + D++ D ++E++K EA
Sbjct: 404 SIERDEYHHLYDFVTAKKLRVKNISSENKTTNPGDDVWSSSDESHDAYMEKVKTEARERT 463
Query: 361 SDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSSVKASTSKKKS 420
++ +D D + D+ P + G E ++ +S + + + + S
Sbjct: 464 TEMDDDDDDDEDDEDFKPPESDGSELAEEYDSNVQTTTSEDESGENDDDDDSEEDETNIS 523
Query: 421 RDGDEDGKK--KKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGI-AFTDVGRVLGE 477
+ + K+ KKQKK KDPNAP R +S + + RE I K+ G + +V + GE
Sbjct: 524 NETKQPSKRQTKKQKKPKDPNAPTRPLSAYFLWFNENREKIAKNLGGQNSVAEVAKAAGE 583
Query: 478 RWKKMSVEEREPYESKARADKKRYKDEISGYKN 510
W+ M + Y+S+ KK+Y++++ Y++
Sbjct: 584 IWRNMDSTAKSSYQSRVDELKKKYQEDLRIYQS 616
>gi|425773481|gb|EKV11833.1| Structure-specific recognition protein, putative [Penicillium
digitatum Pd1]
Length = 633
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 159/444 (35%), Positives = 236/444 (53%), Gaps = 43/444 (9%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTG-----------------ANE 44
L F V + AFEV +++S T L G+N+V +EF + G A
Sbjct: 185 LAFNVQNRPAFEVPYSEISNTNLAGRNEVAVEFSLPAGDGNDVVTKPGSTKNRGRKAAAG 244
Query: 45 KDSLMEISFHIPNSNTQ--------------FVGDENHPPAQVFRDKIMSMADVGAGGEE 90
D L+E+ F+IP + + E A +F + +M A++G +
Sbjct: 245 PDELVEMRFYIPGTAMKKEKVEGAEDEEEDNEEEVEEQNAANLFYETLMDKAEIGDVAGD 304
Query: 91 AVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVV 150
TF + LTPRGR+ ++++ S RL+G+ D+KIQYS++ + FLLPK++ HT +V+
Sbjct: 305 TFATFLDVLHLTPRGRFDIDMYESSFRLRGKTYDYKIQYSAIKKFFLLPKNDDTHTLIVL 364
Query: 151 TLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTI 210
LDPP+R+GQT YP +V+Q + D + E+ M+E++LN++YKD+L+ Y+ IH+V T +
Sbjct: 365 GLDPPLRQGQTRYPFLVMQLKLDEEISLEMNMTEDILNSQYKDRLQAHYEEPIHQVVTKV 424
Query: 211 LRGLSGAKITKPGKFRSAQDGY-AVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDY 269
RGLSG K+ P + S+ G+ VK S+KA +G+LY L+KS F+PKP T I E I
Sbjct: 425 FRGLSGKKVIMPSRDFSSHHGHQGVKCSIKANEGLLYFLDKSLMFVPKPATYIQMENIAI 484
Query: 270 VEFERHAAGGSNMHYFDLLIRLKTE-QEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMK 328
V R S FD+ + LK EH F NI R E +L DF KG++I N +
Sbjct: 485 VTMSRVGGAVSASRTFDITVSLKGGLGEHQFSNINREEQKSLEDFFKAKGIRIKNEMAEE 544
Query: 329 TTDGVAAVLQEDDDDAVDPHLERIKNEAGGDES--DEE-----DSDFVADKDDGGSPTDD 381
+AA L D + D + + A DES DE+ DSD + D + D
Sbjct: 545 AAGLIAAALDNDAMGSSDDEVRPDRGSADEDESSIDEDFAGSSDSDVAEEFDSDHESSGD 604
Query: 382 SGEEDSDASESGG---EKEKPAKK 402
S E+ DAS+ GG E E+P KK
Sbjct: 605 SDEDMDDASDGGGDNQEAERPKKK 628
>gi|425775777|gb|EKV14029.1| Structure-specific recognition protein, putative [Penicillium
digitatum PHI26]
Length = 633
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 159/444 (35%), Positives = 236/444 (53%), Gaps = 43/444 (9%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTG-----------------ANE 44
L F V + AFEV +++S T L G+N+V +EF + G A
Sbjct: 185 LAFNVQNRPAFEVPYSEISNTNLAGRNEVAVEFSLPAGDGNDVVTKPGSTKNRGRKAAAG 244
Query: 45 KDSLMEISFHIPNSNTQ--------------FVGDENHPPAQVFRDKIMSMADVGAGGEE 90
D L+E+ F+IP + + E A +F + +M A++G +
Sbjct: 245 PDELVEMRFYIPGTAMKKEKVEGAEDEEEDNEEEVEEQNAANLFYETLMDKAEIGDVAGD 304
Query: 91 AVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVV 150
TF + LTPRGR+ ++++ S RL+G+ D+KIQYS++ + FLLPK++ HT +V+
Sbjct: 305 TFATFLDVLHLTPRGRFDIDMYESSFRLRGKTYDYKIQYSAIKKFFLLPKNDDTHTLIVL 364
Query: 151 TLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTI 210
LDPP+R+GQT YP +V+Q + D + E+ M+E++LN++YKD+L+ Y+ IH+V T +
Sbjct: 365 GLDPPLRQGQTRYPFLVMQLKLDEEISLEMNMTEDILNSQYKDRLQAHYEEPIHQVVTKV 424
Query: 211 LRGLSGAKITKPGKFRSAQDGY-AVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDY 269
RGLSG K+ P + S+ G+ VK S+KA +G+LY L+KS F+PKP T I E I
Sbjct: 425 FRGLSGKKVIMPSRDFSSHHGHQGVKCSIKANEGLLYFLDKSLMFVPKPATYIQMENIAI 484
Query: 270 VEFERHAAGGSNMHYFDLLIRLKTE-QEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMK 328
V R S FD+ + LK EH F NI R E +L DF KG++I N +
Sbjct: 485 VTMSRVGGAVSASRTFDITVSLKGGLGEHQFSNINREEQKSLEDFFKAKGIRIKNEMAEE 544
Query: 329 TTDGVAAVLQEDDDDAVDPHLERIKNEAGGDES--DEE-----DSDFVADKDDGGSPTDD 381
+AA L D + D + + A DES DE+ DSD + D + D
Sbjct: 545 AAGLIAAALDNDAMGSSDDEVRPDRGSADEDESSIDEDFAGSSDSDVAEEFDSDHESSGD 604
Query: 382 SGEEDSDASESGG---EKEKPAKK 402
S E+ DAS+ GG E E+P KK
Sbjct: 605 SDEDMDDASDGGGDNQEAERPKKK 628
>gi|242006908|ref|XP_002424284.1| predicted protein [Pediculus humanus corporis]
gi|212507684|gb|EEB11546.1| predicted protein [Pediculus humanus corporis]
Length = 768
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 180/520 (34%), Positives = 267/520 (51%), Gaps = 54/520 (10%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L F V AFE+ L VSQ GKN+V +EFH +D N LME+ FHIP+S +
Sbjct: 118 LLNFEVSNHTAFEIPLNYVSQCTT-GKNEVTIEFHQNDDAPVN----LMEMRFHIPSSES 172
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
Q G++ P F +MS A V +A+ F I LTPRGRY +++ SF +L G
Sbjct: 173 Q--GED---PVDAFHQNVMSKASVINVSGDALAIFREIQCLTPRGRYDIKVFSSFFQLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQF-ETDYVVQSE 179
+ D+KI S+V+RLFLLP ++ F VV+LDPPI++GQT Y +V F + + + E
Sbjct: 228 KTFDYKIPASTVLRLFLLPHHDKRQIFFVVSLDPPIKQGQTRYHFLVCLFPQGEDEISIE 287
Query: 180 LLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLK 239
L SEE + K+ K+E KG +EV T+++ + G K+T P F D A+ S K
Sbjct: 288 LPYSEEEVKQKFDGKIEKEMKGQTYEVLATLMKSIVGRKLTYPS-FTGKSDTPAIACSYK 346
Query: 240 AEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLF 299
A G LYP+++ F ++ KPP I EE+ V F R +GGS FD + LK H F
Sbjct: 347 AAAGYLYPMDRGFIYVHKPPFYIRFEEVASVNFAR--SGGSTRS-FDFEVELKNGVVHTF 403
Query: 300 RNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEA--- 356
+I+++EY ++DFI K L + N G + + D D D +L R+K EA
Sbjct: 404 SSIEKDEYEKMYDFIVLKKLIVKNRGKADKPNYNDDFV--DSDQENDAYLVRVKREAEER 461
Query: 357 ----GGDESDEE--DSDF--------VADKDDGGSPTDDSGEE-DSDASESGGEKEKPAK 401
G +DEE D DF VA++ D +PT +S EE SDAS +++K K
Sbjct: 462 DENGDGASNDEESTDEDFNPNQEESDVAEEYDSNAPTTESDEEGGSDASGKEKKEKKHKK 521
Query: 402 KESKKESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKK 461
++ E K K K+ NAPKR S + + R+ +K+
Sbjct: 522 AKTISEKPRKKKKEK-----------------KIKNSNAPKRPPSAYFIWMNENRDKLKE 564
Query: 462 SNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRY 501
P + T++ + GE W+++ +++ + KA+ K Y
Sbjct: 565 EYPNLQMTELAKKAGEVWREL--KDKTKWNEKAKKAKAEY 602
>gi|298706803|emb|CBJ29726.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 645
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 190/543 (34%), Positives = 285/543 (52%), Gaps = 30/543 (5%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQG---KNDVILEFHVDDTTGANEKDSLMEISFHIPN 57
++ F G K F++++ DVSQ + G NDV L+ H D T E D+L+ I +P
Sbjct: 111 IVRFSSGNKTLFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTE-DTLVAIRVTLPE 169
Query: 58 SNTQFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTF---EGIAILTPRGRYSVELHLS 114
+ + PA+ + +M A++ + +V F +G PRGRYSVE++
Sbjct: 170 KDED---TDERSPAESLQMAVMERANIHDVKGKVLVEFNESQGTFDF-PRGRYSVEMYSH 225
Query: 115 FLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDY 174
F+R+ G D+KIQY+ + +LFLL K ++ + V++LD PIR+GQ Y H+VL+ D
Sbjct: 226 FMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVISLDKPIRQGQQKYQHLVLRTTKDE 285
Query: 175 VVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAV 234
+ + MS E L KY L G +H + I + LS + GKF S AV
Sbjct: 286 ATIT-VNMSAEDLQKKYDSNLNSEMIGPLHNLIAKIFKVLSNKPVYVTGKFSSTNGAKAV 344
Query: 235 KSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERH--AAGGSNMHYFDLLIRLK 292
K +L A +G LYPL KSF F+ KP +I +EI+ VEF+R+ A G FDL + K
Sbjct: 345 KCALGANEGYLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPK 404
Query: 293 -----TEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDP 347
T + ++F I R+EY +L+ F+S K L+I N+ K + A+LQ D D DP
Sbjct: 405 SVAGETPKPYVFSGIDRSEYSSLYSFLSTKKLRIKNI---KESGNDNAMLQLGDLDDHDP 461
Query: 348 HLERIKNEAGGDESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKE 407
+ + ++ G DE E+D+D+ D G +S + +S K +KK
Sbjct: 462 YKAALDDDQGEDEESEDDADYAPDAR--GGSDAESSSDSDGDEDSDDRAHKTSKKRPGTG 519
Query: 408 SSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIA 467
S+ + K+ S G KK++ KKD +APK AMS F+ FSQ R +K NP +
Sbjct: 520 SAKKGPTQKKRASGGGSSKPAPKKKRAKKDKDAPKGAMSAFMQFSQANRAQVKTDNPELK 579
Query: 468 FTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYKNPK-----PMDIDSGNES 522
T++ +VLGE+W K+ +++PY+ KA DK RYK E Y + K P DS N+S
Sbjct: 580 VTEISKVLGEKWGKLDETQKKPYQDKADEDKARYKRERDAYDSKKAATEPPQQSDS-NDS 638
Query: 523 DSA 525
D+A
Sbjct: 639 DAA 641
>gi|402087007|gb|EJT81905.1| FACT complex subunit pob-3 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 562
Score = 247 bits (631), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 134/371 (36%), Positives = 208/371 (56%), Gaps = 21/371 (5%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANE-------KDSLMEISFH 54
LTF V + +FEV +++S T L G+N++ +EF V++ +G + KD L EI F+
Sbjct: 117 LTFNVQNRPSFEVPYSEISNTNLAGRNEIAVEFAVNEDSGKGKGQKATAGKDQLTEIRFY 176
Query: 55 IPNSNTQF----------VGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPR 104
IP + T+ +E +F D ++ A++G + + TF + LTPR
Sbjct: 177 IPGTTTRKEAEGEDAASDADEEEKNAVTIFYDTLIEKAEIGETAGDTIATFLDVLHLTPR 236
Query: 105 GRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYP 164
GR+ ++++ RL+G+ D+K+QY ++ + +LPK ++ H + + LDPP+R+GQT YP
Sbjct: 237 GRFDIDMYDGSFRLRGKTYDYKLQYDAIRKFMVLPKPDEMHFLICIGLDPPLRQGQTRYP 296
Query: 165 HIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGK 224
IV+QF+ D V +L ++EE LN KYKDKL+ Y+ +H+V T I RGL+ KIT P K
Sbjct: 297 FIVMQFKRDEEVTLDLNLTEEELNVKYKDKLQGHYEQPLHQVVTYIFRGLANKKITAPAK 356
Query: 225 -FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMH 283
F++ + +K S+KA +G LY LEK+F F+PKP T I +E++ V F R S
Sbjct: 357 GFQTHRGQTGIKCSIKASEGFLYCLEKAFMFVPKPATYISYEQVGSVTFSRIGGAVSATQ 416
Query: 284 YFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQE---D 340
FD+ I ++T F NI R + L F K L++ N D AA+ Q+
Sbjct: 417 TFDITIHMRTGTSSQFSNINREDLKALESFFQAKELRVKNELDEDANLMAAAMRQQAMDS 476
Query: 341 DDDAVDPHLER 351
DD V P +R
Sbjct: 477 SDDEVGPRADR 487
>gi|448088706|ref|XP_004196610.1| Piso0_003832 [Millerozyma farinosa CBS 7064]
gi|448092858|ref|XP_004197641.1| Piso0_003832 [Millerozyma farinosa CBS 7064]
gi|359378032|emb|CCE84291.1| Piso0_003832 [Millerozyma farinosa CBS 7064]
gi|359379063|emb|CCE83260.1| Piso0_003832 [Millerozyma farinosa CBS 7064]
Length = 537
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 156/427 (36%), Positives = 237/427 (55%), Gaps = 33/427 (7%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIP----N 57
L F V K AFE+ +D+S + L GKN+V +E ++D+ D L+E+ F+IP N
Sbjct: 123 LVFQVNNKPAFELPYSDISNSNLTGKNEVAVELNLDNNHNKT-GDELVEMRFYIPGVLEN 181
Query: 58 SNTQFVGDENH-------------PPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPR 104
+T EN A VF +++ AD+G G EA+V+F I LTPR
Sbjct: 182 ESTVKKETENGEVKQEEEEEPEEVSAATVFYEQLKDRADIGQGSGEAIVSFGDILFLTPR 241
Query: 105 GRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYP 164
GRY ++++ + LRL+G+ D+KIQY + R+F LPK ++ H +V+ +DPP+R+GQT YP
Sbjct: 242 GRYDIDMYPTSLRLRGKTYDYKIQYKQIERIFSLPKPDEAHHLLVLQIDPPLRQGQTRYP 301
Query: 165 HIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGK 224
+V+QF + ++ EL +S+E KYKD+L+ +Y IH V + +GL+ ++ PG
Sbjct: 302 FLVIQFSKEEEIELELNVSDEEYEQKYKDRLKRTYDAPIHLVMSHCFKGLTERRLIVPGA 361
Query: 225 FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHY 284
F+S Q + SLKA +G LYPL++ F F+ KP I + E+ + R G S
Sbjct: 362 FQSRQLQPGISCSLKASEGYLYPLDRCFLFVTKPTIYIPYSEVSNITMSRTGGGVSASRT 421
Query: 285 FDLLIRLK-TEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDD 343
FDL + L+ + Q H+F NI R E + F S KG+K+ N + A+L + ++
Sbjct: 422 FDLEVNLRGSGQPHVFGNIDREEQEVIESFCSQKGIKVRNEEKL-----ARAMLAKAINE 476
Query: 344 AVDPHLERIKNEAGGDESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGG---EKEKPA 400
D E + + GDE E+D DF GS +D + E DS+ASES + EKP
Sbjct: 477 QDDDDDEDVDMGSAGDEESEDD-DF-----HSGSESDVAEEFDSNASESENSDDDGEKPP 530
Query: 401 KKESKKE 407
KK+SK +
Sbjct: 531 KKKSKND 537
>gi|308811236|ref|XP_003082926.1| recombination signal sequence recognition pr (ISS) [Ostreococcus
tauri]
gi|116054804|emb|CAL56881.1| recombination signal sequence recognition pr (ISS) [Ostreococcus
tauri]
Length = 583
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 140/343 (40%), Positives = 203/343 (59%), Gaps = 34/343 (9%)
Query: 3 TFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQF 62
F V K FE+ +S+ + GKN+V+++FH DDT A EKDSL+E+SF +P + +
Sbjct: 109 VFEVDGKTQFELEGKYISEATVVGKNEVVMQFHTDDT--AAEKDSLVEMSFFVPPGSETW 166
Query: 63 VGDENHPP----AQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRL 118
G++ P A R I+S+A A E V +++LH +++++
Sbjct: 167 AGEDPENPEDSAAHRLRAAILSIAAADAEAGEPV---------------TMDLHHTYMKM 211
Query: 119 QGQANDFKIQYSSVVRLFLLPK--SNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVV 176
Q DFK+QYSS+VR++LLPK SNQ H V+ LDPPIRKGQT YPHI+ F D
Sbjct: 212 QSSTLDFKVQYSSIVRVYLLPKPHSNQSH--AVIALDPPIRKGQTFYPHILAMFNDD--- 266
Query: 177 QSELLMSEELLNTKYKDK---LEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYA 233
E L L K+K LE SY G + EVF +L+ L+G K+T+ F ++ G+A
Sbjct: 267 --EHLTVVPNLEPAMKEKFPTLEASYDGSVGEVFVRVLKNLAGVKLTRQSAFTASAGGHA 324
Query: 234 VKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGG-SNMHYFDLLIRLK 292
++ S KA+ G+LYPLEK+FF++PKPP L+ + E+D VEFERHAA G S+ FDL I +K
Sbjct: 325 IRVSHKADVGLLYPLEKAFFYVPKPPLLLHYSEVDEVEFERHAAAGHSSAKTFDLTITMK 384
Query: 293 TEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAA 335
+ F IQR+E+ NL +F++ K ++I N+ D + A
Sbjct: 385 GGSSYDFHGIQRSEFQNLVNFLTAKEVRISNVDTNARADALIA 427
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 442 KRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRY 501
+R +S ++FFS +R I ++NP TD+ + LGERWK +S +E+ Y+ +A DK RY
Sbjct: 480 QRGLSAYMFFSAAKRAEIAEANPEFGITDIAKALGERWKTVS-DEKSVYQQQAEEDKARY 538
Query: 502 KDEISGY 508
+ E++ Y
Sbjct: 539 EREMAEY 545
>gi|115400027|ref|XP_001215602.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114191268|gb|EAU32968.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 610
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 163/454 (35%), Positives = 237/454 (52%), Gaps = 55/454 (12%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHV--DDTTGANEK-------------- 45
L+F V + AFE+ +++S T L GKN+V +EF++ D T+ A
Sbjct: 154 LSFNVQNRPAFEIPYSEISNTNLAGKNEVAVEFNLAADGTSNAQPAGSTKNRGRKAAAGP 213
Query: 46 DSLMEISFHIPNSNTQ----------------FVGDENHPPAQVFRDKIMSMADVGAGGE 89
D L+E+ F+IP + + E A +F + +M A++G
Sbjct: 214 DELVEMRFYIPGTAVKTEKGVKEEDGEEQENGEEEGEEQNAANLFYETLMDKAEIGDVAG 273
Query: 90 EAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVV 149
+ TF + LTPRGR+ ++++ S RL+G+ D+KIQY+S+ + FLLPK++ HT +V
Sbjct: 274 DTFATFLDVLHLTPRGRFDIDMYESSFRLRGKTYDYKIQYASIKKFFLLPKNDDTHTLIV 333
Query: 150 VTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTT 209
+ L+PP+R+GQT YP +V+Q + D + EL M++ELL T+YKDKLEP Y+ IH+V T
Sbjct: 334 LGLEPPLRQGQTRYPFLVMQLKLDEEISLELNMTDELLETRYKDKLEPRYEEPIHQVVTK 393
Query: 210 ILRGLSGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEID 268
I RGLSG K+ P K F S VK S+KA +G+LY L+KS F+PKP T I E +
Sbjct: 394 IFRGLSGKKVIMPSKDFVSHHGHSGVKCSIKANEGLLYFLDKSLIFVPKPATYIQLENVG 453
Query: 269 YVEFERHAAGGSNMHYFDLLIRLKTEQ-EHLFRNIQRNEYHNLFDFISGKGLKIMNLGDM 327
V R S FD+ + LK EH F NI R E L DF K ++I N
Sbjct: 454 VVTMSRVGGAVSASRTFDITVSLKGGMGEHQFSNINREEQQPLEDFFKAKNIRIKNEMSD 513
Query: 328 KTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDESD--------EEDSDFVADKDDG---- 375
T+ +AA L +D + D R + ++ + E DSD + D
Sbjct: 514 DTSALIAAALDNEDMASSDEDGGRADRGSADEDEESVDEDFHAESDSDVAEEYDSAHESS 573
Query: 376 GSPTD-------DSGEEDSDASESGGEKEKPAKK 402
GS +D D+GEED D S E+E+P KK
Sbjct: 574 GSGSDAEMDDASDAGEEDEDVDMS--EEERPKKK 605
>gi|327297202|ref|XP_003233295.1| hypothetical protein TERG_06288 [Trichophyton rubrum CBS 118892]
gi|326464601|gb|EGD90054.1| hypothetical protein TERG_06288 [Trichophyton rubrum CBS 118892]
Length = 667
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 156/445 (35%), Positives = 232/445 (52%), Gaps = 44/445 (9%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHV--DDTTGANE--------------- 44
L+F V + AFEV +++S T L G+N+V +EF + DD + A E
Sbjct: 218 LSFNVQNRPAFEVPYSEISNTNLAGRNEVAVEFFLPTDDASTAKEQPAGSTKNRGRKAGL 277
Query: 45 -KDSLMEISFHIPNSNTQFVGD------------------ENHPPAQVFRDKIMSMADVG 85
+D L+E+ F+IP + T+ E A +F + +M A++G
Sbjct: 278 GRDELVEMRFYIPGTVTKKEEGDEQGEGEENKSADGEEEVEEQNAANLFYETLMDKAEIG 337
Query: 86 AGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPH 145
+ TF + LTPRGR+ ++++ S RL+G+ D+KIQY S+ + FLLPK++ H
Sbjct: 338 DVAGDTFATFLDVLHLTPRGRFDMDMYESSFRLRGKTYDYKIQYQSIKKFFLLPKNDDTH 397
Query: 146 TFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHE 205
T + + LDPP+R+GQT YP +V+Q + D + +L M++ELL T+YKDKLE Y+ IH+
Sbjct: 398 TLITLGLDPPLRQGQTRYPFLVMQLKLDDEISIDLNMTDELLQTRYKDKLEAHYEEPIHQ 457
Query: 206 VFTTILRGLSGAKITKPGKFRSAQDGYA-VKSSLKAEDGVLYPLEKSFFFLPKPPTLILH 264
V T + RGLSG K+ P + ++ G++ VK S KA +G+L+ L+KSF F+PKP T I
Sbjct: 458 VVTKVFRGLSGKKVIMPSRDFASHHGHSGVKCSTKANEGLLFCLDKSFMFVPKPATYIQI 517
Query: 265 EEIDYVEFERHAAGGSNMHYFDLLIRLKTEQ-EHLFRNIQRNEYHNLFDFISGKGLKIMN 323
E I + R S FD+ + LK Q EH F NI R E L DF K ++ N
Sbjct: 518 ENISVITMSRVGGTVSASRTFDITMTLKGGQGEHQFSNINREEQQPLEDFFKAKNIRFKN 577
Query: 324 LGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDESDEE--DSDFVADKDDGGSPTDD 381
+ + +A L+ D ++ + G D E D DFV D D + D
Sbjct: 578 EMVEEASTLIATALENDQMMDSSDDDAGVQEDRGSAAEDSESPDEDFVGDSDSEVAEEFD 637
Query: 382 ----SGEEDSDASESGGEKEKPAKK 402
S DSDA E+E+P KK
Sbjct: 638 SEHASSSGDSDAEMDDIEEERPKKK 662
>gi|146324848|ref|XP_748973.2| structure-specific recognition protein [Aspergillus fumigatus
Af293]
gi|148887146|sp|Q4WGK6.2|POB3_ASPFU RecName: Full=FACT complex subunit pob3; AltName: Full=Facilitates
chromatin transcription complex subunit pob3
gi|129556629|gb|EAL86935.2| structure-specific recognition protein, putative [Aspergillus
fumigatus Af293]
gi|159123257|gb|EDP48377.1| structure-specific recognition protein, putative [Aspergillus
fumigatus A1163]
Length = 573
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 162/457 (35%), Positives = 234/457 (51%), Gaps = 61/457 (13%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEK---------------- 45
L F V + AFE+ +++S T L GKN+V +EF + AN +
Sbjct: 117 LAFNVQNRPAFEIPYSEISNTNLAGKNEVAVEFALTSDGDANAQPSGSTKNRGRKAAAGP 176
Query: 46 DSLMEISFHIPNSNTQ---------------FVGDENHPPAQVFRDKIMSMADVGAGGEE 90
D L+E+ F+IP + + E A +F + +M A++G +
Sbjct: 177 DELVEMRFYIPGTAVKTEKGIKTENDENGEEEEEGEEQNAANLFYETLMEKAEIGDVAGD 236
Query: 91 AVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVV 150
TF + LTPRGR+ ++++ S RL+G+ D+KIQY+S+ + FLLPK+++ HT +V+
Sbjct: 237 TFATFLDVLHLTPRGRFDIDMYESSFRLRGKTYDYKIQYASIKKFFLLPKNDEMHTLIVL 296
Query: 151 TLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTI 210
LDPP+R+GQT YP +V+Q + D + EL M+EELL ++YKDKLEP Y+ IH+V T I
Sbjct: 297 GLDPPLRQGQTRYPFLVMQLKLDEEISLELNMTEELLESRYKDKLEPRYEEPIHQVVTKI 356
Query: 211 LRGLSGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDY 269
RGLSG K+ P K F S VK S+KA +G+LY L+KS F+PKP T + E I
Sbjct: 357 FRGLSGKKVIMPSKDFVSHHGHSGVKCSIKANEGLLYFLDKSLIFVPKPATYVQIENIAV 416
Query: 270 VEFERHAAGGSNMHYFDLLIRLKTEQ-EHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMK 328
+ R S FD+ + LK EH F NI R E L +F K ++ N
Sbjct: 417 ITMSRVGGAVSASRTFDITVTLKAGMGEHQFSNINREEQQPLEEFFKAKNIRFKNEMSDD 476
Query: 329 TTDGVAAVLQEDDDDAVDPHLER----------------IKNEAGGDESDEEDSDFV--- 369
T+ +AA L DD + D R + E+ D ++E DS+
Sbjct: 477 TSALIAAALDNDDMMSSDEDGGRADRGSADEDEESVDEDFQAESESDVAEEFDSEHESSG 536
Query: 370 ----ADKDDGGSPTDDSGEEDSDASESGGEKEKPAKK 402
A+ DD DD EED D SE E+E+P KK
Sbjct: 537 SASDAEMDDASDAGDD--EEDVDMSE---EEERPKKK 568
>gi|326483746|gb|EGE07756.1| structure-specific recognition protein [Trichophyton equinum CBS
127.97]
Length = 637
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 156/445 (35%), Positives = 233/445 (52%), Gaps = 44/445 (9%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHV--DDTTGANE--------------- 44
L+F V + AFEV +++S T L G+N+V +EF + DD++ A E
Sbjct: 188 LSFNVQNRPAFEVPYSEISNTNLAGRNEVAVEFFLPTDDSSTAKEQPAGSTKNRGRKAGL 247
Query: 45 -KDSLMEISFHIPNSNTQFVGD------------------ENHPPAQVFRDKIMSMADVG 85
+D L+E+ F+IP + T+ E A +F + +M A++G
Sbjct: 248 GRDELVEMRFYIPGTVTKKEEGDEQGEGEENKSADGEEEVEEQNAANLFYETLMDKAEIG 307
Query: 86 AGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPH 145
+ TF + LTPRGR+ ++++ S RL+G+ D+KIQY S+ + FLLPK++ H
Sbjct: 308 DVAGDTFATFLDVLHLTPRGRFDMDMYESSFRLRGKTYDYKIQYQSIKKFFLLPKNDDTH 367
Query: 146 TFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHE 205
T + + LDPP+R+GQT YP +V+Q + D + +L M++ELL T+YKDKLE Y+ IH+
Sbjct: 368 TLITLGLDPPLRQGQTRYPFLVMQLKLDDEISIDLNMTDELLQTRYKDKLEAHYEEPIHQ 427
Query: 206 VFTTILRGLSGAKITKPGKFRSAQDGYA-VKSSLKAEDGVLYPLEKSFFFLPKPPTLILH 264
V T + RGLSG K+ P + ++ G++ VK S KA +G+L+ L+KSF F+PKP T I
Sbjct: 428 VVTKVFRGLSGKKVIMPSRDFASHHGHSGVKCSTKANEGLLFCLDKSFMFVPKPATYIQI 487
Query: 265 EEIDYVEFERHAAGGSNMHYFDLLIRLKTEQ-EHLFRNIQRNEYHNLFDFISGKGLKIMN 323
E I + R S FD+ + LK Q EH F NI R E L DF K ++ N
Sbjct: 488 ENISVITMSRVGGTVSASRTFDITMTLKGGQGEHQFSNINREEQQPLEDFFKAKNIRFKN 547
Query: 324 LGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDESDEE--DSDFVADKDDGGSPTDD 381
+ + +A L+ D ++ + G D E D DFV D D + D
Sbjct: 548 EMVEEASTLIATALENDQMMDSSDDDAGVQEDRGSAAEDSESPDEDFVGDSDSEVAEEFD 607
Query: 382 ----SGEEDSDASESGGEKEKPAKK 402
S DSDA E+E+P KK
Sbjct: 608 SEHASSSGDSDAEMDDVEEERPKKK 632
>gi|367026844|ref|XP_003662706.1| POB3-like protein [Myceliophthora thermophila ATCC 42464]
gi|347009975|gb|AEO57461.1| POB3-like protein [Myceliophthora thermophila ATCC 42464]
Length = 570
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 146/425 (34%), Positives = 231/425 (54%), Gaps = 48/425 (11%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANE---------------KD 46
LTF V + AFE+ +++S T L G+N++ +EF V DT +N KD
Sbjct: 117 LTFNVQNRPAFEIPYSEISNTNLAGRNEIAVEFSVADTGKSNGQNGATPGKGRKAAAGKD 176
Query: 47 SLMEISFHIPNSNTQF----------VGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFE 96
L E+ F+IP + T+ V +E +F D ++ A++G + + TF
Sbjct: 177 QLTEMRFYIPGTTTRKEAEGGEAGSDVDEEEKNAVTLFYDTLIEKAEIGETAGDTIATFL 236
Query: 97 GIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPI 156
+ LTPRGR+ ++++ + RL+G+ D+KIQY ++ + +LPK + H + + LDPP+
Sbjct: 237 DVLHLTPRGRFDIDMYDASFRLRGKTYDYKIQYEAIKKFMVLPKPDDTHFMLCIGLDPPL 296
Query: 157 RKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSG 216
R+GQT YP +V+QF+ D V +L +SEE LN KYKD+L+P Y+ IH+V I +GL+
Sbjct: 297 RQGQTRYPFLVMQFKQDEEVTLDLNLSEEELNGKYKDRLQPHYEQPIHQVVAYIFKGLAN 356
Query: 217 AKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERH 275
KIT P K F + + Y +K S+KA +G LY LEK+F F+PKP T I +E+ + F R
Sbjct: 357 KKITAPAKDFTTHRQQYGIKCSIKASEGFLYCLEKAFMFVPKPATYISYEQTQSITFSRV 416
Query: 276 AAGGSNMHYFDLLIRLKT-EQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVA 334
+ S + FD+ + +K+ F NI R + L DF KGL++ N D ++T A
Sbjct: 417 SGAVSALSTFDITVHMKSGAGSSQFSNINREDLKALEDFFKLKGLRVKNEIDEESTLMAA 476
Query: 335 AVLQE----DDDDAVDPHLER-------------IKNEAGGDESDEEDSDFVADKDDGGS 377
A+ E D++ V +R + E+ D ++E DS+ +D GS
Sbjct: 477 ALRDEAMASSDEEVVGAKADRGSADEDEESIDEDFQAESESDVAEEYDSNHESD----GS 532
Query: 378 PTDDS 382
+D+S
Sbjct: 533 GSDES 537
>gi|326475629|gb|EGD99638.1| FACT complex subunit pob3 [Trichophyton tonsurans CBS 112818]
Length = 539
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 156/445 (35%), Positives = 233/445 (52%), Gaps = 44/445 (9%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHV--DDTTGANE--------------- 44
L+F V + AFEV +++S T L G+N+V +EF + DD++ A E
Sbjct: 90 LSFNVQNRPAFEVPYSEISNTNLAGRNEVAVEFFLPTDDSSTAKEQPAGSTKNRGRKAGL 149
Query: 45 -KDSLMEISFHIPNSNTQFVGD------------------ENHPPAQVFRDKIMSMADVG 85
+D L+E+ F+IP + T+ E A +F + +M A++G
Sbjct: 150 GRDELVEMRFYIPGTVTKKEEGDEQGEGEENKSADGEEEVEEQNAANLFYETLMDKAEIG 209
Query: 86 AGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPH 145
+ TF + LTPRGR+ ++++ S RL+G+ D+KIQY S+ + FLLPK++ H
Sbjct: 210 DVAGDTFATFLDVLHLTPRGRFDMDMYESSFRLRGKTYDYKIQYQSIKKFFLLPKNDDTH 269
Query: 146 TFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHE 205
T + + LDPP+R+GQT YP +V+Q + D + +L M++ELL T+YKDKLE Y+ IH+
Sbjct: 270 TLITLGLDPPLRQGQTRYPFLVMQLKLDDEISIDLNMTDELLQTRYKDKLEAHYEEPIHQ 329
Query: 206 VFTTILRGLSGAKITKPGKFRSAQDGYA-VKSSLKAEDGVLYPLEKSFFFLPKPPTLILH 264
V T + RGLSG K+ P + ++ G++ VK S KA +G+L+ L+KSF F+PKP T I
Sbjct: 330 VVTKVFRGLSGKKVIMPSRDFASHHGHSGVKCSTKANEGLLFCLDKSFMFVPKPATYIQI 389
Query: 265 EEIDYVEFERHAAGGSNMHYFDLLIRLKTEQ-EHLFRNIQRNEYHNLFDFISGKGLKIMN 323
E I + R S FD+ + LK Q EH F NI R E L DF K ++ N
Sbjct: 390 ENISVITMSRVGGTVSASRTFDITMTLKGGQGEHQFSNINREEQQPLEDFFKAKNIRFKN 449
Query: 324 LGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDESDEE--DSDFVADKDDGGSPTDD 381
+ + +A L+ D ++ + G D E D DFV D D + D
Sbjct: 450 EMVEEASTLIATALENDQMMDSSDDDAGVQEDRGSAAEDSESPDEDFVGDSDSEVAEEFD 509
Query: 382 ----SGEEDSDASESGGEKEKPAKK 402
S DSDA E+E+P KK
Sbjct: 510 SEHASSSGDSDAEMDDVEEERPKKK 534
>gi|340374713|ref|XP_003385882.1| PREDICTED: FACT complex subunit SSRP1-like [Amphimedon
queenslandica]
Length = 412
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 138/327 (42%), Positives = 195/327 (59%), Gaps = 10/327 (3%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+LTF+V K AFEV L +VS+ GKN+V LEFH +DT SLME+ FH+P + T
Sbjct: 94 LLTFLVDSKPAFEVPLEEVSRVT-AGKNEVSLEFHQNDTAAV----SLMEMRFHVPTTGT 148
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
G+E+ P Q F DK+ + AD+ A+ +F + LTPRGRY+++++ +FL G
Sbjct: 149 D--GEED--PVQSFHDKVQAKADILQATGNAIASFTEMHCLTPRGRYTIKVYPTFLGAHG 204
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI +SS+ RLF+LP ++ H F+V+ LDPPIR+GQT YP +LQ E D + L
Sbjct: 205 KTFDYKIPFSSITRLFMLPHNDGRHLFLVLGLDPPIRQGQTRYPFFILQLENDETCELTL 264
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
MSEE L KY KL +G + EVF +++ L G K+ PG F++ AV S KA
Sbjct: 265 AMSEEDLKEKYGGKLTQEMEGPLMEVFARLMKVLVGKKLMVPGSFKNNNGQNAVACSCKA 324
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLEK F F+ KP I E+I V F R A+GG + FD I + H F
Sbjct: 325 TAGFLYPLEKGFMFVHKPALFIKFEDIANVNFARMASGGVS-RSFDFDIETREGVVHHFS 383
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDM 327
++ R++Y L +F++ K LKI + G +
Sbjct: 384 SLMRDDYTRLHEFVTEKRLKIKDKGSL 410
>gi|119482904|ref|XP_001261480.1| structure-specific recognition protein, putative [Neosartorya
fischeri NRRL 181]
gi|119409635|gb|EAW19583.1| structure-specific recognition protein, putative [Neosartorya
fischeri NRRL 181]
Length = 574
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 162/458 (35%), Positives = 234/458 (51%), Gaps = 62/458 (13%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEK---------------- 45
L F V + AFE+ +++S T L GKN+V +EF + AN +
Sbjct: 117 LAFNVQNRPAFEIPYSEISNTNLAGKNEVAVEFALTSDGDANVQPSGSTKNRGRKAAAGP 176
Query: 46 DSLMEISFHIPNSNTQ----------------FVGDENHPPAQVFRDKIMSMADVGAGGE 89
D L+E+ F+IP + + E A +F + +M A++G
Sbjct: 177 DELVEMRFYIPGTAVKTEKGIKTENDEENGEEEEEGEEQNAANLFYETLMEKAEIGDVAG 236
Query: 90 EAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVV 149
+ TF + LTPRGR+ ++++ S RL+G+ D+KIQY+S+ + FLLPK+++ HT +V
Sbjct: 237 DTFATFLDVLHLTPRGRFDIDMYESSFRLRGKTYDYKIQYASIKKFFLLPKNDEMHTLIV 296
Query: 150 VTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTT 209
+ LDPP+R+GQT YP +V+Q + D + EL M+EELL ++YKDKLEP Y+ IH+V T
Sbjct: 297 LGLDPPLRQGQTRYPFLVMQLKLDEEISLELNMTEELLESRYKDKLEPRYEEPIHQVVTK 356
Query: 210 ILRGLSGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEID 268
I RGLSG K+ P K F S VK S+KA +G+LY L+KS F+PKP T + E I
Sbjct: 357 IFRGLSGKKVIMPSKDFVSHHGHSGVKCSIKANEGLLYFLDKSLIFVPKPATYVQIENIA 416
Query: 269 YVEFERHAAGGSNMHYFDLLIRLKTEQ-EHLFRNIQRNEYHNLFDFISGKGLKIMNLGDM 327
+ R S FD+ + LK EH F NI R E L +F K ++ N
Sbjct: 417 VITMSRVGGAVSASRTFDITVTLKAGMGEHQFSNINREEQQPLEEFFKAKNIRFKNEMSD 476
Query: 328 KTTDGVAAVLQEDDDDAVDPHLER----------------IKNEAGGDESDEEDSDFV-- 369
T+ +AA L DD + D R + E+ D ++E DS+
Sbjct: 477 DTSALIAAALDNDDMMSSDEDGGRADRGSADEDEESVDEDFQAESESDVAEEFDSEHESS 536
Query: 370 -----ADKDDGGSPTDDSGEEDSDASESGGEKEKPAKK 402
A+ DD DD EED D SE E+E+P KK
Sbjct: 537 GSASDAEMDDASDAGDD--EEDVDMSE---EEERPKKK 569
>gi|213407046|ref|XP_002174294.1| FACT complex subunit pob3 [Schizosaccharomyces japonicus yFS275]
gi|212002341|gb|EEB08001.1| FACT complex subunit pob3 [Schizosaccharomyces japonicus yFS275]
Length = 507
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 137/351 (39%), Positives = 199/351 (56%), Gaps = 8/351 (2%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHV--DDTTGANEKDSLMEISFHIPNSN 59
L F V + AFE+ +A V T L GKN+V LEF D + + D L+E+ +IP +
Sbjct: 118 LVFEVNSRPAFEIPVASVVNTNLSGKNEVALEFSTQNDGPVPSAQSDQLVEMRLYIPGTT 177
Query: 60 TQFVGDENHPP-----AQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLS 114
T+ E A VF + + AD+G +A+V+F I +LTPRGRY ++++
Sbjct: 178 TREEAAEGEEATEQNLASVFYETLKERADIGQVTGDAIVSFSDILLLTPRGRYDIDMYED 237
Query: 115 FLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDY 174
+RL+G+ D+K+ Y+S++RLFLLPK + H V+ LDPP+R+GQT YP +V QF D
Sbjct: 238 CMRLRGKTYDYKVDYTSIIRLFLLPKPDDQHVVFVIGLDPPLRQGQTRYPFLVTQFIRDE 297
Query: 175 VVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAV 234
++ +L + E LL KY D+L+ SY +EV + I RGL+G ++T P F S AV
Sbjct: 298 DMEVDLNIDEGLLREKYADRLKSSYDQPAYEVVSQIFRGLTGRRVTTPSNFSSHHGHTAV 357
Query: 235 KSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTE 294
K S KA +G LY LEKSF F+PKPP I +I V R A S FDL +++
Sbjct: 358 KCSYKANEGQLYVLEKSFLFIPKPPIYIGMGDIARVTLSRVGASVSAARTFDLTFTMRSG 417
Query: 295 QEHLFRNIQRNEYHNLFDFISGKGLKIMN-LGDMKTTDGVAAVLQEDDDDA 344
+ F NI R E + L ++I K +KI N L D + + + +D+DD
Sbjct: 418 TSYQFSNINREEQNVLVEYIESKHIKIHNDLADEAAQNTLLSAALDDEDDG 468
>gi|158300246|ref|XP_320213.4| AGAP012335-PA [Anopheles gambiae str. PEST]
gi|157013066|gb|EAA00360.4| AGAP012335-PA [Anopheles gambiae str. PEST]
Length = 728
Score = 244 bits (623), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 146/356 (41%), Positives = 199/356 (55%), Gaps = 14/356 (3%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F V K +FE+ L VSQ + GKN+V +EFH +D SLME+ FHIP S +
Sbjct: 117 VLSFDVENKTSFEIPLNHVSQCNV-GKNEVTVEFHRNDDAPV----SLMEMRFHIPTSES 171
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
GD + P + F++ +M A V + +A+ F I LTPRGRY +++ SF +L G
Sbjct: 172 --AGDVD--PVEAFQENVMKQASVISVSGDAIAIFREIHCLTPRGRYDIKVFQSFFQLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ DFKI SSV+RLFLLP + F V++LDPPI++GQT Y +V F+ D EL
Sbjct: 228 KTYDFKIPTSSVLRLFLLPHKDNRQMFFVISLDPPIKQGQTRYHFLVTLFQMDEETNIEL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
+EE L KY+DKL G ++EV I++ + K+T PG F A+ S KA
Sbjct: 288 PFTEEELKEKYEDKLTKELSGPVYEVLGKIMKVIINRKLTGPGTFIGHSGTPAIGCSFKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLE+ F ++ KPP I EEI V F R +GGS FD I LKT H F
Sbjct: 348 AAGYLYPLERGFIYVHKPPVHIRFEEISTVNFAR--SGGST-RSFDFEIELKTGTVHTFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEA 356
+I++ EY LFDFI K L + N G + A D++ D +L R+K EA
Sbjct: 405 SIEKEEYSKLFDFIVSKKLNVKNTGGKASYKDDFA--DSDNEGEPDAYLARVKAEA 458
>gi|312385332|gb|EFR29859.1| hypothetical protein AND_00900 [Anopheles darlingi]
Length = 730
Score = 244 bits (623), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 145/356 (40%), Positives = 198/356 (55%), Gaps = 15/356 (4%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F V K +FE+ L VSQ + GKN+V +EFH +D SLME+ FHIP S +
Sbjct: 117 VLSFDVENKTSFEIPLNHVSQCNV-GKNEVTVEFHRNDDAPV----SLMEMRFHIPTSES 171
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
+ P + F++ +M A V + +A+ F I LTPRGRY +++ +F +L G
Sbjct: 172 ADID-----PVEAFQENVMKQASVISVSGDAIAIFREIHCLTPRGRYDIKVFQTFFQLHG 226
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ DFKI SSV+RLFLLP + F V++LDPPI++GQT Y +V F+ D EL
Sbjct: 227 KTYDFKIPTSSVLRLFLLPHKDNRQMFFVISLDPPIKQGQTRYHFLVTLFQMDEETNIEL 286
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
SEE L KY+DKL G ++EV I++ + K+T PG F A+ S KA
Sbjct: 287 PFSEEELREKYEDKLTKELSGPVYEVLGKIMKVIINRKLTGPGSFIGHSGTPAIGCSFKA 346
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLE+ F ++ KPP I EEI V F R +GGS FD I LKT H F
Sbjct: 347 AAGYLYPLERGFIYVHKPPVHIRFEEIASVNFAR--SGGST-RSFDFEIELKTGTVHTFS 403
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEA 356
+I++ EY LFDFIS K L + N G + A D++ D +L R+K EA
Sbjct: 404 SIEKEEYSKLFDFISSKKLHVKNTGGKASYKDDFA--DSDNEGEPDAYLARVKAEA 457
>gi|302656953|ref|XP_003020211.1| hypothetical protein TRV_05716 [Trichophyton verrucosum HKI 0517]
gi|291184020|gb|EFE39593.1| hypothetical protein TRV_05716 [Trichophyton verrucosum HKI 0517]
Length = 636
Score = 244 bits (623), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 159/445 (35%), Positives = 230/445 (51%), Gaps = 49/445 (11%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHV--DDTTGANE--------------- 44
L+F V + AFEV +++S T L G+N+V +EF + DD + A E
Sbjct: 192 LSFNVQNRPAFEVPYSEISNTNLAGRNEVAVEFFLPTDDASTAKEQPAGSTKNRGRKAGL 251
Query: 45 -KDSLMEISFHIPNS---------------NTQFVGDEN---HPPAQVFRDKIMSMADVG 85
KD L+E+ F+IP + N G+E A +F + +M A++G
Sbjct: 252 GKDELVEMRFYIPGTVPKKEEGDEQGEGEENKSADGEEEVEEQNAANLFYETLMDKAEIG 311
Query: 86 AGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPH 145
+ TF + LTPRGR+ ++++ S RL+G+ D+KIQY S+ + FLLPK++ H
Sbjct: 312 DVAGDTFATFLDVLHLTPRGRFDMDMYESSFRLRGKTYDYKIQYQSIKKFFLLPKNDDTH 371
Query: 146 TFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHE 205
T + + LDPP+R+GQT YP +V+Q + D + +L M++ELL T+YKDKLE Y+ IH+
Sbjct: 372 TLITLGLDPPLRQGQTRYPFLVMQLKLDDEISIDLNMTDELLQTRYKDKLEAHYEEPIHQ 431
Query: 206 VFTTILRGLSGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILH 264
V T + RGLSG K+ P + F S VK S KA +G+L+ L+KSF F+PKP T I
Sbjct: 432 VVTKVFRGLSGKKVIMPSRDFAS-----GVKCSTKANEGLLFCLDKSFMFVPKPATYIQI 486
Query: 265 EEIDYVEFERHAAGGSNMHYFDLLIRLKTEQ-EHLFRNIQRNEYHNLFDFISGKGLKIMN 323
E I + R S FD+ + LK Q EH F NI R E L DF K ++ N
Sbjct: 487 ENISVITMSRVGGTVSASRTFDITMTLKGGQGEHQFSNINREEQQPLEDFFKAKNIRFKN 546
Query: 324 LGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDESDEE--DSDFVADKDDGGSPTDD 381
+ + +A L+ D ++ + G D E D DFV D D + D
Sbjct: 547 EMVEEASTLIATALENDQMMDSSDDDAGVQEDRGSAAEDSESPDEDFVGDSDSEVAEEFD 606
Query: 382 ----SGEEDSDASESGGEKEKPAKK 402
S DSDA E+E+P KK
Sbjct: 607 SEHASSSGDSDAEMDDVEEERPKKK 631
>gi|320587727|gb|EFX00202.1| structure-specific recognition protein [Grosmannia clavigera
kw1407]
Length = 565
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 135/368 (36%), Positives = 215/368 (58%), Gaps = 24/368 (6%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDD---TTG---------ANEKDSLM 49
L F V + AFE+ +++S T L G+N++ ++F +++ T G A KD LM
Sbjct: 117 LIFNVQNRPAFEIPYSEISNTNLAGRNEISIDFSLNEDAKTNGKGPIKGNKAAAGKDQLM 176
Query: 50 EISFHIPNSNT--QFVGDENHPPAQ-------VFRDKIMSMADVGAGGEEAVVTFEGIAI 100
E+ F++P + T + GDE A+ +F D +M A++G + + TF +
Sbjct: 177 EMRFYVPGTTTKKEADGDEAGSGAEEEKNAVTLFYDTLMEKAEIGESAGDTIATFLDVLH 236
Query: 101 LTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQ 160
LTPRGR+ ++++ S RL+G+ D+KIQY ++ + +LPK ++ H + + LDPP+R+GQ
Sbjct: 237 LTPRGRFDIDMYDSSFRLRGKTYDYKIQYDAIKKFMVLPKPDEMHFMLCIGLDPPLRQGQ 296
Query: 161 TLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKIT 220
T YP +V+QF+ D V +L +SEE L ++YKDKL+ Y+ +H+V T I RGL+ K+T
Sbjct: 297 TRYPFVVMQFKRDEEVTLDLNLSEEELESRYKDKLQSHYEQPLHQVVTYIFRGLANKKVT 356
Query: 221 KPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGG 279
P K F + + + +K S+KA +G LY LEK+F F+PKP T I +E+ V F R
Sbjct: 357 TPAKDFTTHRQQFGIKCSIKASEGFLYCLEKAFMFVPKPATYISYEQTQSVTFSRVGGAV 416
Query: 280 SNMHYFDLLIRLKT-EQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQ 338
S + FD+ + LK+ F NI R + L DF KGL++ N D + + +AA L+
Sbjct: 417 STLSTFDITVHLKSGAGSSQFSNINREDLKALEDFFKLKGLRVKNEID-EDANLMAAALR 475
Query: 339 EDDDDAVD 346
+ D D+ D
Sbjct: 476 DQDIDSSD 483
>gi|302511187|ref|XP_003017545.1| hypothetical protein ARB_04427 [Arthroderma benhamiae CBS 112371]
gi|291181116|gb|EFE36900.1| hypothetical protein ARB_04427 [Arthroderma benhamiae CBS 112371]
Length = 611
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 158/445 (35%), Positives = 230/445 (51%), Gaps = 49/445 (11%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHV--DDTTGANE--------------- 44
L+F V + AFEV +++S T L G+N+V +EF + DD + A E
Sbjct: 167 LSFNVQNRPAFEVPYSEISNTNLAGRNEVAVEFFLPTDDASTAKEQPAGSTKNRGRKAGL 226
Query: 45 -KDSLMEISFHIPNS---------------NTQFVGDEN---HPPAQVFRDKIMSMADVG 85
+D L+E+ F+IP + N G+E A +F + +M A++G
Sbjct: 227 GRDELVEMRFYIPGTVPKKEEGDEQGEGEENKSADGEEEVEEQNAANLFYETLMDKAEIG 286
Query: 86 AGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPH 145
+ TF + LTPRGR+ ++++ S RL+G+ D+KIQY S+ + FLLPK++ H
Sbjct: 287 DVAGDTFATFLDVLHLTPRGRFDMDMYESSFRLRGKTYDYKIQYQSIKKFFLLPKNDDTH 346
Query: 146 TFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHE 205
T + + LDPP+R+GQT YP +V+Q + D + +L M++ELL T+YKDKLE Y+ IH+
Sbjct: 347 TLITLGLDPPLRQGQTRYPFLVMQLKLDDEISIDLNMTDELLQTRYKDKLEAHYEEPIHQ 406
Query: 206 VFTTILRGLSGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILH 264
V T + RGLSG K+ P + F S VK S KA +G+L+ L+KSF F+PKP T I
Sbjct: 407 VVTKVFRGLSGKKVIMPSRDFAS-----GVKCSTKANEGLLFCLDKSFMFVPKPATYIQI 461
Query: 265 EEIDYVEFERHAAGGSNMHYFDLLIRLKTEQ-EHLFRNIQRNEYHNLFDFISGKGLKIMN 323
E I + R S FD+ + LK Q EH F NI R E L DF K ++ N
Sbjct: 462 ENISVITMSRVGGTVSASRTFDITMTLKGGQGEHQFSNINREEQQPLEDFFKAKNIRFKN 521
Query: 324 LGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDESDEE--DSDFVADKDDGGSPTDD 381
+ + +A L+ D ++ + G D E D DFV D D + D
Sbjct: 522 EMVEEASTLIATALENDQMMDSSDDDAGVQEDRGSAAEDSESPDEDFVGDSDSEVAEEFD 581
Query: 382 ----SGEEDSDASESGGEKEKPAKK 402
S DSDA E+E+P KK
Sbjct: 582 SEHASSSGDSDAEMDDVEEERPKKK 606
>gi|195382097|ref|XP_002049768.1| GJ21774 [Drosophila virilis]
gi|194144565|gb|EDW60961.1| GJ21774 [Drosophila virilis]
Length = 729
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 144/356 (40%), Positives = 199/356 (55%), Gaps = 13/356 (3%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F K FEV L+ VSQ + GKN+V LEFH +D L+E+ FHIP +
Sbjct: 118 VLSFDKDTKTIFEVPLSHVSQC-VTGKNEVTLEFHQNDDAPVG----LLEMRFHIPAVES 172
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
DE+ P + F +M+ A V + E++ F I ILTPRGRY +++ +F +L G
Sbjct: 173 ---ADED--PVEKFHQNVMNKASVISASGESIAIFREIHILTPRGRYDIKIFSTFFQLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI SV+RLF+LP + F V++LDPPI++GQT Y ++VL F D EL
Sbjct: 228 KTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLDPPIKQGQTRYHYLVLLFAPDEETTIEL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
SE L KY+ KLE G ++EV +++ L G KIT PG F AV S KA
Sbjct: 288 PFSEAELRDKYEGKLEKELSGPVYEVMGKVMKVLIGRKITGPGNFIGHSGTAAVGCSFKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLE+ F ++ KPP I EEI V F R +GGS FD + LK H+F
Sbjct: 348 AAGYLYPLERGFIYIHKPPLHIRFEEISSVNFAR--SGGST-RSFDFEVTLKNGTVHIFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEA 356
+I++ EY LFDFI+ K L + N+G KT D+++ D +L R+K EA
Sbjct: 405 SIEKEEYAKLFDFITQKKLHVSNMGKDKTGYKDVDFGDSDNENEPDAYLARLKAEA 460
>gi|170033411|ref|XP_001844571.1| FACT complex subunit Ssrp1 [Culex quinquefasciatus]
gi|167874309|gb|EDS37692.1| FACT complex subunit Ssrp1 [Culex quinquefasciatus]
Length = 728
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 146/360 (40%), Positives = 203/360 (56%), Gaps = 21/360 (5%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F V K +FE+ L VSQ GKN+V +EFH +D SLME+ FHIP S +
Sbjct: 117 VLSFDVENKTSFEIPLNHVSQCN-TGKNEVTVEFHRNDDAPV----SLMEMRFHIPISES 171
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
+ P + F++++M A V + +A+ F I LTPRGRY +++ SF +L G
Sbjct: 172 A-----DTDPVEAFQEQVMKQASVISASGDAIAIFREIHCLTPRGRYDIKVFQSFFQLHG 226
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ DFKI SSV+RLFLLP + F V++LDPPI++GQT Y +V F+ D EL
Sbjct: 227 KTYDFKIPTSSVLRLFLLPHKDNRQMFFVISLDPPIKQGQTRYHFLVTLFQMDEETNIEL 286
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
+EE L KY+DKL G ++EV I++ ++ K+T PG F AV S KA
Sbjct: 287 PFTEEELKEKYEDKLTKELSGPVYEVLGKIMKVINNRKLTGPGTFIGHSGTPAVGCSYKA 346
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G +YPLE+ F ++ KPP I EEI V F R +GGS FD I LKT + F
Sbjct: 347 AAGYIYPLERGFIYVHKPPVHIRFEEIASVNFAR--SGGST-RSFDFEIELKTGTIYTFS 403
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQE----DDDDAVDPHLERIKNEA 356
+I++ EY LFDFIS K L + N G DG A ++ D+++ D +L R+K EA
Sbjct: 404 SIEKEEYGKLFDFISSKKLHVKNTGK----DGKNAYKEDFADSDNENEPDAYLARVKAEA 459
>gi|347839745|emb|CCD54317.1| similar to FACT complex subunit pob3 [Botryotinia fuckeliana]
Length = 555
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 154/451 (34%), Positives = 236/451 (52%), Gaps = 65/451 (14%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEF---HVDDT---------------TGAN 43
L F V + AFE+ ++S T L GKN+V +EF + DDT +GA
Sbjct: 116 LVFNVQNRPAFEIPYTEISNTNLAGKNEVAVEFTPGNADDTGTNGALGGARAKGKKSGAG 175
Query: 44 EKDSLMEISFHIP-------------NSNTQFVGDENHPPAQVFRDKIMSMADVGAGGEE 90
KD L+E+ F+IP +S + G+E + + +F D +M A++G +
Sbjct: 176 -KDQLVEMRFYIPGTAPKKGAREGEEDSGDEADGEETNA-STIFYDTLMEKAEIGDVAGD 233
Query: 91 AVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVV 150
V TF + LTPRGR+ ++++ S RL+G+ D+KIQY ++ + +LPK ++ H + +
Sbjct: 234 TVATFLDVLHLTPRGRFDIDMYESSFRLRGKTYDYKIQYDNIKKFMVLPKPDELHFMICI 293
Query: 151 TLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTI 210
LDPP+R+GQT YP +V+QF+ D V +L M+E+++ KY KL Y+ +HEV T +
Sbjct: 294 GLDPPLRQGQTRYPFLVMQFKKDEEVTIDLNMTEDVMKDKYAGKLSIHYEQPLHEVVTQV 353
Query: 211 LRGLSGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDY 269
RGL+G KI +P K F S Y +K S+KA +G LY LEK+F F+PKP T I +E+I
Sbjct: 354 FRGLAGKKINQPAKDFLSHHSQYGIKCSIKASEGFLYCLEKAFMFVPKPATYITYEQITV 413
Query: 270 VEFERHAAGGSNMHYFDLLIRLK-TEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMK 328
+ F R S FD+ + +K E F NI R E NL DF KG+++ N D
Sbjct: 414 ITFSRVGGATSASRTFDIAVGMKGGAGETQFSNINREEQKNLEDFFKIKGIRVKNEMDED 473
Query: 329 TTDGVAAV----LQEDDDDAVDPHLER-------------IKNEAGGDESDEEDSDFVAD 371
T +A + +Q D++ V +R K ++ D ++E DS
Sbjct: 474 NTAHIALLNNPDMQSSDEEVVAARADRGSADEDDESVDEDFKTDSESDVAEEYDS----A 529
Query: 372 KDDGGSPTDDSGEEDSDASESGGEKEKPAKK 402
+ G+ ++D G D E+PAKK
Sbjct: 530 HESSGTDSEDEGASDG---------ERPAKK 551
>gi|195148932|ref|XP_002015416.1| GL11071 [Drosophila persimilis]
gi|198455718|ref|XP_001357531.2| GA18454 [Drosophila pseudoobscura pseudoobscura]
gi|221222504|sp|Q293F6.2|SSRP1_DROPS RecName: Full=FACT complex subunit Ssrp1; AltName: Full=Facilitates
chromatin transcription complex subunit Ssrp1; AltName:
Full=Recombination signal sequence recognition protein;
AltName: Full=Single-strand recognition protein
gi|194109263|gb|EDW31306.1| GL11071 [Drosophila persimilis]
gi|198135366|gb|EAL24655.2| GA18454 [Drosophila pseudoobscura pseudoobscura]
Length = 727
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 142/356 (39%), Positives = 197/356 (55%), Gaps = 13/356 (3%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F K FEV L+ VSQ + GKN+V LE+H +D L+E+ FHIP
Sbjct: 118 VLSFDKDSKTIFEVPLSHVSQC-VTGKNEVTLEYHQNDDAPVG----LLEMRFHIPA--- 169
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V + P + F +MS A V + E++ F I ILTPRGRY +++ +F +L G
Sbjct: 170 --VESADDDPVEKFHQNVMSKASVISASGESIAIFREIQILTPRGRYDIKIFSTFFQLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI SV+RLF+LP + F V++LDPPI++GQT Y ++VL F D EL
Sbjct: 228 KTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLDPPIKQGQTRYHYLVLLFAPDEETTIEL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
SE L KY+ KLE G ++EV +++ L G KIT PG F AV S KA
Sbjct: 288 PFSEAELRDKYEGKLEKELSGPVYEVMGKVMKVLIGRKITGPGNFIGHSGTAAVGCSFKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLE+ F ++ KPP I EEI V F R +GGS FD + LK H+F
Sbjct: 348 AAGYLYPLERGFIYIHKPPLHIRFEEISSVNFAR--SGGST-RSFDFEVTLKNGTVHIFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEA 356
+I++ EY LFDFI+ K L + N+G K+ D+++ D +L R+K EA
Sbjct: 405 SIEKEEYAKLFDFITQKKLHVSNMGKDKSGYKDVDFGDSDNENEPDAYLARLKAEA 460
>gi|154312776|ref|XP_001555715.1| hypothetical protein BC1G_05089 [Botryotinia fuckeliana B05.10]
Length = 485
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 154/451 (34%), Positives = 236/451 (52%), Gaps = 65/451 (14%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEF---HVDDT---------------TGAN 43
L F V + AFE+ ++S T L GKN+V +EF + DDT +GA
Sbjct: 46 LVFNVQNRPAFEIPYTEISNTNLAGKNEVAVEFTPGNADDTGTNGALGGARAKGKKSGAG 105
Query: 44 EKDSLMEISFHIP-------------NSNTQFVGDENHPPAQVFRDKIMSMADVGAGGEE 90
KD L+E+ F+IP +S + G+E + + +F D +M A++G +
Sbjct: 106 -KDQLVEMRFYIPGTAPKKGAREGEEDSGDEADGEETNA-STIFYDTLMEKAEIGDVAGD 163
Query: 91 AVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVV 150
V TF + LTPRGR+ ++++ S RL+G+ D+KIQY ++ + +LPK ++ H + +
Sbjct: 164 TVATFLDVLHLTPRGRFDIDMYESSFRLRGKTYDYKIQYDNIKKFMVLPKPDELHFMICI 223
Query: 151 TLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTI 210
LDPP+R+GQT YP +V+QF+ D V +L M+E+++ KY KL Y+ +HEV T +
Sbjct: 224 GLDPPLRQGQTRYPFLVMQFKKDEEVTIDLNMTEDVMKDKYAGKLSIHYEQPLHEVVTQV 283
Query: 211 LRGLSGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDY 269
RGL+G KI +P K F S Y +K S+KA +G LY LEK+F F+PKP T I +E+I
Sbjct: 284 FRGLAGKKINQPAKDFLSHHSQYGIKCSIKASEGFLYCLEKAFMFVPKPATYITYEQITV 343
Query: 270 VEFERHAAGGSNMHYFDLLIRLK-TEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMK 328
+ F R S FD+ + +K E F NI R E NL DF KG+++ N D
Sbjct: 344 ITFSRVGGATSASRTFDIAVGMKGGAGETQFSNINREEQKNLEDFFKIKGIRVKNEMDED 403
Query: 329 TTDGVAAV----LQEDDDDAVDPHLER-------------IKNEAGGDESDEEDSDFVAD 371
T +A + +Q D++ V +R K ++ D ++E DS
Sbjct: 404 NTAHIALLNNPDMQSSDEEVVAARADRGSADEDDESVDEDFKTDSESDVAEEYDS----A 459
Query: 372 KDDGGSPTDDSGEEDSDASESGGEKEKPAKK 402
+ G+ ++D G D E+PAKK
Sbjct: 460 HESSGTDSEDEGASDG---------ERPAKK 481
>gi|357528835|sp|Q5AYE3.2|POB3_EMENI RecName: Full=FACT complex subunit pob3; AltName: Full=Facilitates
chromatin transcription complex subunit pob3
gi|259480271|tpe|CBF71249.1| TPA: FACT complex subunit pob3 (Facilitates chromatin transcription
complex subunit pob3)
[Source:UniProtKB/Swiss-Prot;Acc:Q5AYE3] [Aspergillus
nidulans FGSC A4]
Length = 575
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 144/375 (38%), Positives = 202/375 (53%), Gaps = 35/375 (9%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVD-DTTG--------------ANEKD 46
L F V + AFEV +++S T L GKN+V +E + D G A D
Sbjct: 114 LAFNVQNRPAFEVPYSEISNTNLAGKNEVAVELSLSVDPNGSKPAGSTKNRGRKAAAGPD 173
Query: 47 SLMEISFHIPNSNTQF---VGDEN---------------HPPAQVFRDKIMSMADVGAGG 88
L+E+ F+IP + + + EN A +F + +M A++G
Sbjct: 174 ELVEMRFYIPGTAVKTENGIKGENADEKNGGEGEENGEEQNAANLFYELLMEKAEIGDVA 233
Query: 89 EEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFV 148
+ TF + LTPRGR+ ++++ S RL+G+ D+KIQYSS+ + FLLPK++ HT +
Sbjct: 234 GDTFATFLDVLHLTPRGRFDIDMYESSFRLRGKTYDYKIQYSSIKKFFLLPKNDDTHTLI 293
Query: 149 VVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFT 208
V+ L+PP+R+GQT YP +V+Q + D + EL M+EELL T+YKDKLEP Y+ IH+V T
Sbjct: 294 VLGLEPPLRQGQTRYPFLVMQLKLDEEISLELNMTEELLETRYKDKLEPRYEEPIHQVIT 353
Query: 209 TILRGLSGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEI 267
I RGLSG K+ P K F S VK S+KA +G+LY L+KS F+PKP T I E +
Sbjct: 354 KIFRGLSGKKVIMPSKDFVSHHGHSGVKCSIKANEGLLYFLDKSLIFVPKPATYIQMENV 413
Query: 268 DYVEFERHAAGGSNMHYFDLLIRLKTEQ-EHLFRNIQRNEYHNLFDFISGKGLKIMNLGD 326
V R S FD+ + LK EH F NI R E L +F K ++I N
Sbjct: 414 AVVTMSRVGGAISASRTFDITVSLKAGMGEHQFSNINREEQQPLEEFFKAKNIRIKNEMS 473
Query: 327 MKTTDGVAAVLQEDD 341
T +AA L DD
Sbjct: 474 DDTNALIAAALDNDD 488
>gi|67541034|ref|XP_664291.1| hypothetical protein AN6687.2 [Aspergillus nidulans FGSC A4]
gi|40738440|gb|EAA57630.1| hypothetical protein AN6687.2 [Aspergillus nidulans FGSC A4]
Length = 589
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 144/375 (38%), Positives = 202/375 (53%), Gaps = 35/375 (9%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVD-DTTG--------------ANEKD 46
L F V + AFEV +++S T L GKN+V +E + D G A D
Sbjct: 120 LAFNVQNRPAFEVPYSEISNTNLAGKNEVAVELSLSVDPNGSKPAGSTKNRGRKAAAGPD 179
Query: 47 SLMEISFHIPNSNTQF---VGDEN---------------HPPAQVFRDKIMSMADVGAGG 88
L+E+ F+IP + + + EN A +F + +M A++G
Sbjct: 180 ELVEMRFYIPGTAVKTENGIKGENADEKNGGEGEENGEEQNAANLFYELLMEKAEIGDVA 239
Query: 89 EEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFV 148
+ TF + LTPRGR+ ++++ S RL+G+ D+KIQYSS+ + FLLPK++ HT +
Sbjct: 240 GDTFATFLDVLHLTPRGRFDIDMYESSFRLRGKTYDYKIQYSSIKKFFLLPKNDDTHTLI 299
Query: 149 VVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFT 208
V+ L+PP+R+GQT YP +V+Q + D + EL M+EELL T+YKDKLEP Y+ IH+V T
Sbjct: 300 VLGLEPPLRQGQTRYPFLVMQLKLDEEISLELNMTEELLETRYKDKLEPRYEEPIHQVIT 359
Query: 209 TILRGLSGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEI 267
I RGLSG K+ P K F S VK S+KA +G+LY L+KS F+PKP T I E +
Sbjct: 360 KIFRGLSGKKVIMPSKDFVSHHGHSGVKCSIKANEGLLYFLDKSLIFVPKPATYIQMENV 419
Query: 268 DYVEFERHAAGGSNMHYFDLLIRLKTEQ-EHLFRNIQRNEYHNLFDFISGKGLKIMNLGD 326
V R S FD+ + LK EH F NI R E L +F K ++I N
Sbjct: 420 AVVTMSRVGGAISASRTFDITVSLKAGMGEHQFSNINREEQQPLEEFFKAKNIRIKNEMS 479
Query: 327 MKTTDGVAAVLQEDD 341
T +AA L DD
Sbjct: 480 DDTNALIAAALDNDD 494
>gi|195123163|ref|XP_002006078.1| GI18750 [Drosophila mojavensis]
gi|193911146|gb|EDW10013.1| GI18750 [Drosophila mojavensis]
Length = 734
Score = 241 bits (615), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 142/356 (39%), Positives = 199/356 (55%), Gaps = 13/356 (3%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F K FEV L+ VSQ + GKN+V LEFH +D L+E+ FHIP +
Sbjct: 118 VLSFDKDTKTIFEVPLSYVSQC-VTGKNEVTLEFHQNDDAPVG----LLEMRFHIPAVES 172
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
DE+ P + F +M+ A V + E++ F I ILTPRGRY +++ +F +L G
Sbjct: 173 ---ADED--PVEKFHQNVMNKASVISASGESIAIFREIHILTPRGRYDIKIFSTFFQLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI SV+RLF+LP + F V++LDPPI++GQT Y ++VL F D EL
Sbjct: 228 KTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLDPPIKQGQTRYHYLVLLFAPDEETTIEL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
SE L KY+ KLE G ++EV +++ L G KIT PG F A+ S KA
Sbjct: 288 PFSEAELRDKYEGKLEKELSGPVYEVMGKVMKVLIGRKITGPGNFIGHSGTAAIGCSFKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLE+ F ++ KPP I EEI V F R +GGS FD + LK H+F
Sbjct: 348 AAGYLYPLERGFIYIHKPPLHIRFEEISSVNFAR--SGGST-RSFDFEVTLKNGTVHIFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEA 356
+I++ EY LFDFI+ K L + N+G K+ D+++ D +L R+K EA
Sbjct: 405 SIEKEEYAKLFDFITQKKLHVSNMGKDKSGYKDVDFGDSDNENEPDAYLARLKAEA 460
>gi|430813279|emb|CCJ29353.1| unnamed protein product [Pneumocystis jirovecii]
Length = 523
Score = 241 bits (615), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 156/405 (38%), Positives = 215/405 (53%), Gaps = 28/405 (6%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHV------------DDTTGANEKDSLM 49
L F V K AFE+ L+ +S T L GKN+V LEF + A +D L+
Sbjct: 117 LLFNVSNKPAFEIPLSSISNTNLSGKNEVSLEFSLFGNESDMGKLENQVVKDATIQDQLV 176
Query: 50 EISFHIPNSNTQFVGDENHP----PAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRG 105
E+ F+IP T G E + A VF + + AD+G E++V+F + LTPR
Sbjct: 177 EMRFYIPGMTT--TGSEENSESVNSASVFYETLKDKADIGQVSGESIVSFSDVLFLTPR- 233
Query: 106 RYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPH 165
Y V+++ FLRL+G+ D+KI YSS V+LFLLPK + H V+ LDPP+R+GQT YP
Sbjct: 234 -YDVDMYSLFLRLRGKTYDYKIYYSSFVKLFLLPKPDDMHVVFVMGLDPPLRQGQTEYPF 292
Query: 166 IVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKF 225
+V+QF + ++ EL + + KY +KL+ Y L +EV + I GL+ KI P F
Sbjct: 293 LVIQFMREEEMEVELNLEDSEFQEKYSEKLKKKYDQLAYEVVSQIFYGLTSRKIITPSTF 352
Query: 226 RSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYF 285
RS +D AVK S+KA +G L+ L++SF F+PKP I EI +V R S F
Sbjct: 353 RSYRDHAAVKCSMKASEGNLFCLDRSFLFIPKPSIWIPMSEISHVTLSRINTSLSASRTF 412
Query: 286 DLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMN-LGDMKTTDGVAAVLQEDDDDA 344
DL LK + F NI R E L DFI K +KI N L D D A + DD+ +
Sbjct: 413 DLTFSLKGGVYYQFSNINREEQKLLEDFIKSKNIKIKNDLND----DSQAILTALDDELS 468
Query: 345 VDPHLERIKNEAGGDESD---EEDSDFVADKDDGGSPTDDSGEED 386
D H I ++ + D E DSD + D+ + DSGEED
Sbjct: 469 DDDHSIPISDDGESPDDDFEAESDSDVAEEYDENVESSKDSGEED 513
>gi|157129263|ref|XP_001655339.1| structure-specific recognition protein [Aedes aegypti]
gi|108872274|gb|EAT36499.1| AAEL011425-PA [Aedes aegypti]
Length = 727
Score = 241 bits (615), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 142/356 (39%), Positives = 196/356 (55%), Gaps = 13/356 (3%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F + K +FE+ L VSQ GKN+V +EFH +D SLME+ FHIP S +
Sbjct: 116 VLSFDIENKTSFEIPLNHVSQCN-SGKNEVTVEFHRNDDAPV----SLMEMRFHIPTSES 170
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
P + F++++M A V + +A+ F I LTPRGRY +++ SF +L G
Sbjct: 171 A-----ETDPVEAFQEQVMKQASVISATGDAIAIFREIHCLTPRGRYDIKVFQSFFQLHG 225
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ DFKI SSV+RLFLLP + F V++LDPPI++GQT Y +V F+ D EL
Sbjct: 226 KTYDFKIPTSSVLRLFLLPHKDNRQMFFVISLDPPIKQGQTRYHFLVTLFQMDEETNIEL 285
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
+EE L KY+DKL G ++EV I++ + K+T PG F A+ S KA
Sbjct: 286 PFTEEELKEKYEDKLTKELSGPVYEVLGKIMKVIINRKLTGPGTFIGHSGTPAIGCSYKA 345
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLE+ F ++ KPP I EEI V F R +GGS FD I LKT + F
Sbjct: 346 AAGYLYPLERGFIYVHKPPVHIRFEEIASVNFAR--SGGST-RSFDFEIELKTSTIYTFS 402
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEA 356
+I++ EY LFDFIS K L + N G + D++ D +L R+K EA
Sbjct: 403 SIEKEEYGKLFDFISSKKLHVKNTGKDGKNNYKEDFADSDNEGEPDAYLARVKAEA 458
>gi|406867832|gb|EKD20870.1| structure-specific recognition protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 576
Score = 241 bits (614), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 153/447 (34%), Positives = 234/447 (52%), Gaps = 46/447 (10%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHV---DDTTGAN--------------- 43
L F V + AFE+ +++S T L GKN+V +EF + D TG N
Sbjct: 126 LAFNVQNRPAFEIPYSEISNTNLAGKNEVAIEFALPAGADDTGTNGALGGARGKGKKAGG 185
Query: 44 EKDSLMEISFHIPNSNTQFVG-------------DENHPPAQVFRDKIMSMADVGAGGEE 90
KD L+E+ F+IP T+ +E A +F D +M A++G +
Sbjct: 186 GKDQLVEMRFYIPGVTTKKAALDGEDAPSDAEDAEEEQNAANLFYDTLMEKAEIGEVAGD 245
Query: 91 AVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVV 150
TF + LTPRGR+ ++++ + RL+G+ D+KI Y ++ ++ +LPK ++ H + V
Sbjct: 246 TFATFLDVLHLTPRGRFDIDMYENSFRLRGKTYDYKITYDTLKKIIVLPKPDELHFMMCV 305
Query: 151 TLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTI 210
LDPP+R+GQT YP +V+QF+ D V +L M++ELLN KY+ KL Y+ +H+V +
Sbjct: 306 GLDPPLRQGQTRYPFLVMQFKKDEEVTIDLNMTDELLNDKYQGKLAAHYEQPLHQVVAQV 365
Query: 211 LRGLSGAKITKPGK-------FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLIL 263
RGL+G K+ P K +S Y +K S+KA +G LY LEK+F F+PKP + +
Sbjct: 366 FRGLTGKKVNMPAKDFMSKYPLQSHHQQYGIKCSIKASEGFLYCLEKAFMFVPKPASWVP 425
Query: 264 HEEIDYVEFERHAAGGSNMHYFDLLIRLK-TEQEHLFRNIQRNEYHNLFDFISGKGLKIM 322
++ID + F R S FDL + K + E F NI R E L DF KGL++
Sbjct: 426 FDKIDSIVFSRVGGAVSASRTFDLTLHEKGSSTETQFSNINREEQKPLEDFFKVKGLRVK 485
Query: 323 NLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDESDEE--DSDFVADKDDGGSPTD 380
N D T+ +AA L++ D + D + + + G + D E D DF D + +
Sbjct: 486 NEMDEDTSALLAAALRDPDMVSSDEEVVAARADRGSADEDSESADEDFKTDSESDVAEEY 545
Query: 381 DSGEEDSDASE----SGGEKE-KPAKK 402
DS E S S+ +G + E +PAKK
Sbjct: 546 DSAHESSGGSDDEDGAGSDAEQRPAKK 572
>gi|378733511|gb|EHY59970.1| FACT complex subunit pob3 [Exophiala dermatitidis NIH/UT8656]
Length = 569
Score = 241 bits (614), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 141/375 (37%), Positives = 207/375 (55%), Gaps = 37/375 (9%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVD-DTT------------------GA 42
L F V + AFE+ ++S T L GKN++ +EF++D D+T A
Sbjct: 114 LAFNVQNRPAFEIPYTEISNTNLAGKNEIAVEFNLDADSTQNGTNGHKEGSTKNRGRKAA 173
Query: 43 NEKDSLMEISFHIPN--SNTQFVGDEN----------HPPAQVFRDKIMSMADVGAGGEE 90
+D L+E+ F+IP S + G+E A +F + +M A++G
Sbjct: 174 AGRDELVEMRFYIPGTVSKKEVNGEEGSGADEDDEEEQNAANLFYETLMDKAEIGEVAGA 233
Query: 91 AVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVV 150
TF+ I LTPRGR+ ++++ + RL+G+ D+KIQY S+ + F+LPK+++ HT + +
Sbjct: 234 TFATFQDILHLTPRGRFDIDMYENSFRLRGKTYDYKIQYQSIKKFFILPKNDEMHTMITL 293
Query: 151 TLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTI 210
LDPP+R+GQT YP IV+Q + D V +L M+EELL TKYKDKLEP Y+ IH V +
Sbjct: 294 GLDPPLRQGQTRYPFIVMQLKLDDEVNLDLNMTEELLETKYKDKLEPHYEAPIHHVIAKV 353
Query: 211 LRGLSGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDY 269
+GLSG KI P K F S + VK S+KA +G+L+ L+KSF F+PKP T + + I
Sbjct: 354 FKGLSGKKIIMPSKDFVSHHNMNGVKCSIKANEGLLFCLDKSFIFVPKPATYVPIDSIQS 413
Query: 270 VEFERHAAGGSNMHYFDLLIRLKTEQ-EHLFRNIQRNEYHNLFDFISGKGLKIMN--LGD 326
+ R + FD+ + LK Q EH F NI R E L F KG++ N L D
Sbjct: 414 ITMSRVGGALAASRTFDITMTLKNGQGEHQFSNINREEQQPLEAFFQAKGIRFKNEMLDD 473
Query: 327 MKTTDGVAAVLQEDD 341
T + A L++ D
Sbjct: 474 SSTL--LKAALEDQD 486
>gi|389632249|ref|XP_003713777.1| FACT complex subunit pob-3 [Magnaporthe oryzae 70-15]
gi|351646110|gb|EHA53970.1| FACT complex subunit pob-3 [Magnaporthe oryzae 70-15]
Length = 556
Score = 241 bits (614), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 141/396 (35%), Positives = 216/396 (54%), Gaps = 31/396 (7%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVD---DTTGANEKDSLMEISFHIPNS 58
LTF V + +FEV +++S T L G+N++ +EF VD + KD L EI F+IP +
Sbjct: 117 LTFNVQNRPSFEVPYSEISNTNLAGRNEIAVEFGVDGEKEKKPTASKDQLTEIRFYIPGT 176
Query: 59 NTQF----------VGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYS 108
T+ +E +F D ++ AD+G + + TF + LTPRGR+
Sbjct: 177 TTRKEAEGEDAGSDADEEEKNAVTLFYDTLIEKADIGETAGDTIATFLDVLHLTPRGRFD 236
Query: 109 VELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVL 168
++++ S RL+G+ D+K+QY S+ + +LPK ++ H + + LDPP+R+GQT YP IV+
Sbjct: 237 IDMYDSSFRLRGKTYDYKLQYDSIKKFMVLPKPDEMHFLICIGLDPPLRQGQTRYPFIVM 296
Query: 169 QFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGK-FRS 227
QF+ D V +L ++EE LN KYKDKL+ Y+ +H+V T I RGL+ KIT P K F++
Sbjct: 297 QFKRDEEVTLDLNLAEEELNGKYKDKLQGHYEQPLHQVVTYIFRGLANKKITAPAKSFQT 356
Query: 228 AQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDL 287
+ +K ++KA +G LY LEK+F F+PKP T I +E+ V F R S FD+
Sbjct: 357 HRGQLGIKCAIKASEGFLYCLEKAFMFVPKPATYISYEQTQSVTFSRVGGAVSATQTFDI 416
Query: 288 LIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQE---DDDDA 344
I +K F NI R + L F K L++ N D + + +AA+ + DD
Sbjct: 417 TIHMKGGGSSQFSNINREDLKALETFFQAKELRVKNEID-EDANLLAAMRDQAMVSSDDE 475
Query: 345 VDPHLER-------------IKNEAGGDESDEEDSD 367
V P +R + E+ D ++E DSD
Sbjct: 476 VGPKADRGSADEDEESVDEDFQTESESDVAEEYDSD 511
>gi|440475817|gb|ELQ44479.1| FACT complex subunit pob-3 [Magnaporthe oryzae Y34]
gi|440477967|gb|ELQ58893.1| FACT complex subunit pob-3 [Magnaporthe oryzae P131]
Length = 557
Score = 241 bits (614), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 141/396 (35%), Positives = 216/396 (54%), Gaps = 31/396 (7%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVD---DTTGANEKDSLMEISFHIPNS 58
LTF V + +FEV +++S T L G+N++ +EF VD + KD L EI F+IP +
Sbjct: 118 LTFNVQNRPSFEVPYSEISNTNLAGRNEIAVEFGVDGEKEKKPTASKDQLTEIRFYIPGT 177
Query: 59 NTQF----------VGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYS 108
T+ +E +F D ++ AD+G + + TF + LTPRGR+
Sbjct: 178 TTRKEAEGEDAGSDADEEEKNAVTLFYDTLIEKADIGETAGDTIATFLDVLHLTPRGRFD 237
Query: 109 VELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVL 168
++++ S RL+G+ D+K+QY S+ + +LPK ++ H + + LDPP+R+GQT YP IV+
Sbjct: 238 IDMYDSSFRLRGKTYDYKLQYDSIKKFMVLPKPDEMHFLICIGLDPPLRQGQTRYPFIVM 297
Query: 169 QFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGK-FRS 227
QF+ D V +L ++EE LN KYKDKL+ Y+ +H+V T I RGL+ KIT P K F++
Sbjct: 298 QFKRDEEVTLDLNLAEEELNGKYKDKLQGHYEQPLHQVVTYIFRGLANKKITAPAKSFQT 357
Query: 228 AQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDL 287
+ +K ++KA +G LY LEK+F F+PKP T I +E+ V F R S FD+
Sbjct: 358 HRGQLGIKCAIKASEGFLYCLEKAFMFVPKPATYISYEQTQSVTFSRVGGAVSATQTFDI 417
Query: 288 LIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQE---DDDDA 344
I +K F NI R + L F K L++ N D + + +AA+ + DD
Sbjct: 418 TIHMKGGGSSQFSNINREDLKALETFFQAKELRVKNEID-EDANLLAAMRDQAMVSSDDE 476
Query: 345 VDPHLER-------------IKNEAGGDESDEEDSD 367
V P +R + E+ D ++E DSD
Sbjct: 477 VGPKADRGSADEDEESVDEDFQTESESDVAEEYDSD 512
>gi|121711513|ref|XP_001273372.1| structure-specific recognition protein, putative [Aspergillus
clavatus NRRL 1]
gi|119401523|gb|EAW11946.1| structure-specific recognition protein, putative [Aspergillus
clavatus NRRL 1]
Length = 590
Score = 241 bits (614), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 159/462 (34%), Positives = 241/462 (52%), Gaps = 48/462 (10%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEK---------------D 46
L F V + AFE+ +++S T L G+N+V +EF + AN+ D
Sbjct: 132 LVFNVQNRPAFEIPYSEISNTNLAGRNEVAVEFALTSDGDANQPSGSTKNRGRKAAAGPD 191
Query: 47 SLMEISFHIPNSNTQ------------------FVGDENHPPAQVFRDKIMSMADVGAGG 88
L+E+ F+IP + + G E A +F + +M A++G
Sbjct: 192 ELVEMRFYIPGTAVKTEKGIKSENEEENGEEEEEEGGEEQNAANLFYETLMDKAEIGDVA 251
Query: 89 EEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFV 148
+ TF + LTPRGR+ ++++ S RL+G+ D+KIQY+S+ + FLLPK+++ HT +
Sbjct: 252 GDTFATFLDVLHLTPRGRFDIDMYESSFRLRGKTYDYKIQYASIKKFFLLPKNDELHTLI 311
Query: 149 VVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFT 208
V+ LDPP+R+GQT YP +V+Q + D + EL M++ELL ++YKDKLEP Y+ IH+V T
Sbjct: 312 VLGLDPPLRQGQTRYPFLVMQLKLDEEISLELNMTDELLASRYKDKLEPRYEEPIHQVVT 371
Query: 209 TILRGLSGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEI 267
I RGLSG K+ P K F S VK S+KA +G+LY L+KS F+PKP T + E I
Sbjct: 372 KIFRGLSGKKVIMPSKDFVSHHGHSGVKCSIKANEGLLYFLDKSLIFVPKPATYVQIENI 431
Query: 268 DYVEFERHAAGGSNMHYFDLLIRLKTEQ-EHLFRNIQRNEYHNLFDFISGKGLKIMNLGD 326
+ R S FD+ + LK+ EH F NI R E L +F K ++ N
Sbjct: 432 AVITMSRVGGAVSASRTFDITVSLKSGMGEHQFSNINREEQQPLEEFFKAKNIRFKNEMS 491
Query: 327 MKTTDGVAAVLQEDDDDAVDPHLERIKNEAGG----------DESDEEDSDFVADKDDGG 376
T+ +AA L D+DD + E ++ + G D E +SD VA++ D
Sbjct: 492 DDTSALIAAAL--DNDDMISSEEEGVRADRGSADEDEESVDEDFEAESESD-VAEEFDSA 548
Query: 377 SPTDDSGEEDSDASESGGEKEKPAKKESKKESSSVKASTSKK 418
+ S E +DAS+ G ++ S+ E+ K S + K
Sbjct: 549 HESSGSDAEMNDASDGGDNDDEEDADMSEAEARPAKKSKTGK 590
>gi|241950954|ref|XP_002418199.1| DNA polymerase delta binding protein; FACT complex subunit,
putative; facilitates chromatin transcription complex
subunit, putative [Candida dubliniensis CD36]
gi|223641538|emb|CAX43499.1| DNA polymerase delta binding protein [Candida dubliniensis CD36]
Length = 538
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 154/427 (36%), Positives = 231/427 (54%), Gaps = 32/427 (7%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNS--- 58
L F V K AFEV AD+S + L GKN+V +EF++D+ +E ++E+ F++P +
Sbjct: 120 LIFNVNNKPAFEVPYADISNSNLTGKNEVAIEFNLDNNKNGDE---IVEMRFYVPGTIEN 176
Query: 59 NTQFVGDENH------------PPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGR 106
T V EN+ AQ F +++ AD+G EA+V+F + LTPRGR
Sbjct: 177 ETTIVKSENNGDVVEEAVINETSAAQQFYEQLKDKADIGQVAGEAIVSFSDVLFLTPRGR 236
Query: 107 YSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHI 166
Y ++++ S LRL+G+ D+KIQY + R+F LPK ++ H +V+ +DPP+R+GQT YP +
Sbjct: 237 YDIDMYPSSLRLRGKTYDYKIQYEQIERIFSLPKPDETHHLIVLQIDPPLRQGQTRYPFL 296
Query: 167 VLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFR 226
VLQF D + EL +S+E KYKD+L+ +Y + V LRGL+ K+ PG F+
Sbjct: 297 VLQFVKDEETELELNVSDEDFEKKYKDRLKKTYDAPTNVVMAHCLRGLTERKLITPGAFQ 356
Query: 227 SAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFD 286
S V S+KA +G L+PL++ F F+ KP I + EI V R G S FD
Sbjct: 357 SRYLQAGVSCSVKASEGYLFPLDRCFLFVTKPTLYIPYSEISNVVMSRTGGGVSASRTFD 416
Query: 287 LLIR-LKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAV 345
L + + + Q H+F NI R E L F KG+K+ N + A+ QE +DD
Sbjct: 417 LEVNVIGSNQSHVFSNIDREEQEFLESFCKEKGVKVKNEEKIAKARLAKALEQEANDDD- 475
Query: 346 DPHLERIKNEAGGDESDE-------EDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEK 398
+ AG D+ DE DSD + D +P+ D EE +D +E+ ++
Sbjct: 476 --DDDADMGSAGDDDEDEDDDFQSGSDSDVAEEFDSDAAPSSDDDEEMADNNET---DDR 530
Query: 399 PAKKESK 405
P KK++K
Sbjct: 531 PPKKKAK 537
>gi|340905326|gb|EGS17694.1| hypothetical protein CTHT_0070340 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 571
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 132/364 (36%), Positives = 205/364 (56%), Gaps = 25/364 (6%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEF------------HVDDTTGANEKDSLM 49
LTF V + AFE+ ++++ T L G+N++ +EF V + +D L+
Sbjct: 117 LTFNVQNRPAFEIPYSEIANTNLAGRNEIAVEFAPGDHGKSSQNGQVKSKKASASRDQLV 176
Query: 50 EISFHIPNSNTQF----------VGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIA 99
EI F+IP + T+ +E +F D ++ A++G + + TF +
Sbjct: 177 EIRFYIPGTTTRKEAEGGEAGSDADEEEKNAVTLFYDTLIEKAEIGETAGDTIATFLDVL 236
Query: 100 ILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKG 159
LTPRGR+ ++++ + RL+G+ D+KIQY ++ + +LPK + H + + LDPP+R+G
Sbjct: 237 HLTPRGRFDIDMYDTSFRLRGKTYDYKIQYEAIKKFMVLPKPDDLHFMLCIGLDPPLRQG 296
Query: 160 QTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKI 219
QT YP IV+QF+ D V +L +SEE LN KYKD+L+ Y+ H+V T I +GL+ K+
Sbjct: 297 QTRYPFIVMQFKQDEEVTLDLNLSEEELNGKYKDRLQAHYEQPAHQVVTYIFKGLANKKV 356
Query: 220 TKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAG 278
T P K F + + Y +K S+KA +G LY LEK+F F+PKP T I +E+ V F R
Sbjct: 357 TAPAKDFTTHRGHYGIKCSIKASEGFLYCLEKAFMFVPKPATYISYEQTQSVTFSRVGGA 416
Query: 279 GSNMHYFDLLIRLKTEQ-EHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVL 337
S + FD+ + +K Q F NI R E L DF KGLK+ N D + + +AA L
Sbjct: 417 VSTLSTFDITVHMKNGQGSSQFSNINREELKALEDFFKLKGLKVKNEID-EDANLLAAAL 475
Query: 338 QEDD 341
++DD
Sbjct: 476 RDDD 479
>gi|85078552|ref|XP_956186.1| hypothetical protein NCU11168 [Neurospora crassa OR74A]
gi|74613683|sp|Q7RWW0.1|POB3_NEUCR RecName: Full=FACT complex subunit pob-3; AltName: Full=Facilitates
chromatin transcription complex subunit pob-3
gi|28917238|gb|EAA26950.1| hypothetical protein NCU11168 [Neurospora crassa OR74A]
Length = 565
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 145/423 (34%), Positives = 232/423 (54%), Gaps = 38/423 (8%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANE--------------KDS 47
LTF V + AFE+ +++S T L G+N++ +EF +D +N KD
Sbjct: 117 LTFNVQNRPAFEIPYSEISNTNLAGRNEIAVEFAGNDGGKSNGHSGTGGKGKKASAGKDQ 176
Query: 48 LMEISFHIPNSNTQF----------VGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEG 97
L+E+ F+IP + T+ +E +F D ++ A++G + + TF
Sbjct: 177 LVEVRFYIPGTTTRKEAEGGEAGSDADEEEKNAVTLFYDTLIEKAEIGETAGDTIATFLD 236
Query: 98 IAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIR 157
+ LTPRGR+ ++++ + RL+G+ D+KIQY ++ + +LPK + H + + LDPP+R
Sbjct: 237 VLHLTPRGRFDIDMYDASFRLRGKTYDYKIQYDAIKKFMVLPKPDDLHFLLCIGLDPPLR 296
Query: 158 KGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGA 217
+GQT YP +V+QF+ D V +L ++EE LN KYKDKL+ Y+ +H+V I +GL+
Sbjct: 297 QGQTRYPFVVMQFKADEEVTLDLNITEEELNGKYKDKLQSHYEQPLHQVVAYIFKGLANK 356
Query: 218 KITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHA 276
K+T P K F + + Y +K S+KA +G LY LEK+F F+PKP T I +E+ + F R
Sbjct: 357 KVTTPAKDFTTHRQQYGIKCSIKASEGFLYCLEKAFMFVPKPATYISYEQTQSITFSRVG 416
Query: 277 AGGSNMHYFDLLIRLKT-EQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAA 335
S + FD+ + +K F NI R + L +F KGL++ N D T+ +AA
Sbjct: 417 GAVSALSTFDITVHMKNGAGSSQFSNINREDLKALEEFFKLKGLRVKNEID-DDTNLIAA 475
Query: 336 VLQED-----DDDAVDPHLERIKNEAGGDESD-----EEDSDFVADKDDGGSPTDDSGEE 385
L +D D++AV P +R + + D E +SD VA++ D +D SG E
Sbjct: 476 ALGDDDMASSDEEAVGPKADRGSADEDEESVDEDFQAESESD-VAEEYDSNHESDGSGSE 534
Query: 386 DSD 388
+SD
Sbjct: 535 ESD 537
>gi|310793168|gb|EFQ28629.1| structure-specific recognition protein [Glomerella graminicola
M1.001]
Length = 574
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 136/389 (34%), Positives = 217/389 (55%), Gaps = 35/389 (8%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHV---DDTTGAN--------------- 43
L+F V + AFE+ +++S T L G+N+V +EF + TG N
Sbjct: 118 LSFNVQNRPAFEIPYSEISNTNLAGRNEVAVEFSAPTDQNDTGTNGHLGGARGKGKKAGA 177
Query: 44 EKDSLMEISFHIPNS-----------NTQFVGDENHPPAQVFRDKIMSMADVGAGGEEAV 92
KD L+E+ F+IP + + GDE +F D +M A++G + +
Sbjct: 178 GKDQLVEMRFYIPGTVKKEAEGDDAGSDAGAGDEEKNAVTLFYDTLMEKAEIGETAGDTI 237
Query: 93 VTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTL 152
TF I LTPRGR+ ++++ + RL+G+ D+KIQY ++ + +LPK ++ H + V L
Sbjct: 238 ATFLDILHLTPRGRFDIDMYDASFRLRGKTYDYKIQYDAIKKFMVLPKPDETHVLLCVGL 297
Query: 153 DPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILR 212
DPP+R+GQT YP IV+QF+ D V +L ++EE + +YKD+L+P Y+ +H+V T I R
Sbjct: 298 DPPLRQGQTRYPFIVMQFKKDEEVTIDLNLTEEQIEERYKDRLQPHYEQPLHQVITYIFR 357
Query: 213 GLSGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVE 271
GL+ KIT P K F++ ++ + +K S+KA +G LY LEK+F F+PKP T I +E+ +
Sbjct: 358 GLANKKITTPAKDFQTHRNQFGIKCSIKASEGFLYCLEKAFMFVPKPATYIAYEQTASIT 417
Query: 272 FERHAAGGSNMHYFDLLIRLKT-EQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTT 330
F R S + FD+ +++K F NI R + L +F KGL++ N D + +
Sbjct: 418 FSRVGGAVSALSTFDITVQMKNGAGSSQFSNINREDLKGLEEFFRLKGLRVKNEID-EES 476
Query: 331 DGVAAVLQEDDDDAVDPHLERIKNEAGGD 359
+ +AA L+E A+D E + A D
Sbjct: 477 NLIAAALRE---QAMDDSEEEVVGAAKAD 502
>gi|321461212|gb|EFX72246.1| hypothetical protein DAPPUDRAFT_201206 [Daphnia pulex]
Length = 759
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 151/402 (37%), Positives = 216/402 (53%), Gaps = 31/402 (7%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQ 61
++F VG AFE+ L++VSQ GKN+V LEFH +D SLME+ I SN Q
Sbjct: 118 MSFEVGNHTAFEIPLSNVSQCTT-GKNEVTLEFHQNDDASV----SLMEMRLFI-QSNDQ 171
Query: 62 FVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQ 121
GD+ + F+ ++M A V + +A+ F + LTPRGRY +++ SF +L G+
Sbjct: 172 -GGDD---AVEAFQKQVMPKASVISATGDAIAIFREVQCLTPRGRYDIKVFQSFFQLHGK 227
Query: 122 ANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELL 181
D+KI S+V+RLFLLP + F VV+LDPPI++GQT Y +VL F D E+
Sbjct: 228 TFDYKIPASTVLRLFLLPHKDGRQIFFVVSLDPPIKQGQTRYHFLVLLFNKDEETSFEIP 287
Query: 182 MSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAE 241
+SEE L K++ +L G +EV +T+++ + K+T PG F AV S KA
Sbjct: 288 LSEEELKEKFEGRLSRDCNGPTYEVMSTVMKAMVNRKVTIPGNFTGHSGTPAVGCSYKAA 347
Query: 242 DGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRN 301
G LYPLE+ F ++ KPP I EEI V F R GG + FD + K H F +
Sbjct: 348 AGYLYPLERGFIYVHKPPIHIRFEEIASVNFAR---GGGSTRSFDFEVETKNGVVHTFSS 404
Query: 302 IQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNE------ 355
I++ EY+ L+DF++ K L++ N G + D+++A D +L R+K E
Sbjct: 405 IEKEEYNRLYDFVNNKKLRVKNTGRSDKSAHGDDFGDSDEEEAPDAYLARVKAEGKQRDA 464
Query: 356 ----AGGDESDEEDSDF-------VADKDDGGSPTDDSGEED 386
+GGD SDE D DF VA++ D T DS D
Sbjct: 465 VGDDSGGD-SDENDEDFKPGEESDVAEEYDSNVATTDSEASD 505
>gi|336469670|gb|EGO57832.1| hypothetical protein NEUTE1DRAFT_146347 [Neurospora tetrasperma
FGSC 2508]
gi|350290673|gb|EGZ71887.1| FACT complex subunit pob-3 [Neurospora tetrasperma FGSC 2509]
Length = 565
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 144/423 (34%), Positives = 232/423 (54%), Gaps = 38/423 (8%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANE--------------KDS 47
LTF V + AFE+ +++S T L G+N++ +EF +D +N KD
Sbjct: 117 LTFNVQNRPAFEIPYSEISNTNLAGRNEIAVEFAGNDGGKSNGHSGTGGKGKKASAGKDQ 176
Query: 48 LMEISFHIPNSNTQF----------VGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEG 97
L+E+ F+IP + T+ +E +F D ++ A++G + + TF
Sbjct: 177 LVEVRFYIPGTTTRKEAEGGEAGSDADEEEKNAVTLFYDTLIEKAEIGETAGDTIATFLD 236
Query: 98 IAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIR 157
+ LTPRGR+ ++++ + RL+G+ D+KIQY ++ + +LPK + H + + LDPP+R
Sbjct: 237 VLHLTPRGRFDIDMYDASFRLRGKTYDYKIQYDAIKKFMVLPKPDDLHFLLCIGLDPPLR 296
Query: 158 KGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGA 217
+GQT YP +V+QF+ D V +L ++EE LN KYKDKL+ Y+ +H+V I +GL+
Sbjct: 297 QGQTRYPFVVMQFKADEEVTLDLNITEEELNGKYKDKLQSHYEQPLHQVVAYIFKGLANK 356
Query: 218 KITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHA 276
K+T P K F + + Y +K S+KA +G LY LEK+F F+PKP T I +E+ + F R
Sbjct: 357 KVTTPAKDFTTHRQQYGIKCSIKASEGFLYCLEKAFMFVPKPATYISYEQTQSITFSRVG 416
Query: 277 AGGSNMHYFDLLIRLKT-EQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAA 335
S + FD+ + +K F NI R + L +F KGL++ N D T+ ++A
Sbjct: 417 GAVSALSTFDITVHMKNGAGSSQFSNINREDLKALEEFFKLKGLRVKNEID-DDTNLISA 475
Query: 336 VLQED-----DDDAVDPHLERIKNEAGGDESD-----EEDSDFVADKDDGGSPTDDSGEE 385
L +D D++AV P +R + + D E +SD VA++ D +D SG E
Sbjct: 476 ALGDDDMASSDEEAVGPKADRGSADEDEESVDEDFQAESESD-VAEEYDSNHESDGSGSE 534
Query: 386 DSD 388
+SD
Sbjct: 535 ESD 537
>gi|336271647|ref|XP_003350582.1| hypothetical protein SMAC_02295 [Sordaria macrospora k-hell]
gi|380090247|emb|CCC12074.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 565
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 146/422 (34%), Positives = 232/422 (54%), Gaps = 37/422 (8%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVD-------DTTGANEK------DSL 48
LTF V + AFE+ +++S T L G+N++ +EF D + TG K D L
Sbjct: 117 LTFNVQNRPAFEIPYSEISNTNLAGRNEIAVEFANDGGKSNGHNGTGGKGKKATAGKDQL 176
Query: 49 MEISFHIPNSNTQF----------VGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGI 98
+E+ F+IP + T+ +E +F D ++ A++G + + TF +
Sbjct: 177 VEVRFYIPGTTTRKEAEGGEAGSDADEEEKNAVTLFYDTLIEKAEIGETAGDTIATFLDV 236
Query: 99 AILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRK 158
LTPRGR+ ++++ + RL+G+ D+KIQY + + +LPK ++ H + + LDPP+R+
Sbjct: 237 LHLTPRGRFDIDMYDASFRLRGKTYDYKIQYDHIKKFMVLPKPDEVHFLLCIGLDPPLRQ 296
Query: 159 GQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAK 218
GQT YP +V+QF+ D V +L ++EE LN KYKDKL+ Y+ +H+V I +GL+ K
Sbjct: 297 GQTRYPFVVMQFKADEEVTLDLNITEEELNGKYKDKLQSHYEQPLHQVVAYIFKGLANKK 356
Query: 219 ITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAA 277
+T P K F + + Y +K S+KA +G LY LEK+F F+PKP T I +E+ + F R
Sbjct: 357 VTTPAKDFTTHRQQYGIKCSIKASEGFLYCLEKAFMFVPKPATYISYEQTQSITFSRVGG 416
Query: 278 GGSNMHYFDLLIRLKT-EQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAV 336
S + FD+ + +K F NI R + L +F KGL++ N D T+ +AA
Sbjct: 417 AVSALSTFDITVHMKNGAGSSQFSNINREDLKALEEFFKLKGLRVKNEID-DDTNLIAAT 475
Query: 337 LQED-----DDDAVDPHLERIKNEAGGDESD-----EEDSDFVADKDDGGSPTDDSGEED 386
L +D D++AV P +R + + D E +SD VA++ D +D SG E+
Sbjct: 476 LGDDDMASSDEEAVGPKADRGSADEDEESVDEDFQAESESD-VAEEYDSNHESDGSGSEE 534
Query: 387 SD 388
SD
Sbjct: 535 SD 536
>gi|255931771|ref|XP_002557442.1| Pc12g05980 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582061|emb|CAP80225.1| Pc12g05980 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 558
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 154/445 (34%), Positives = 233/445 (52%), Gaps = 47/445 (10%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANE----------------- 44
L F V + AFEV +++S T L G+N+V +EF + G++
Sbjct: 114 LAFNVQNRPAFEVPYSEISNTNLAGRNEVAVEFSLPAGDGSDSVAKPGSTRNRGRKAAAG 173
Query: 45 KDSLMEISFHIPNSNTQ--------------FVGDENHPPAQVFRDKIMSMADVGAGGEE 90
D L+E+ F+IP + + E A +F + +M A++G +
Sbjct: 174 PDELVEMRFYIPGTAVKKEKMEGADGEEEDNEEEAEEQNAANLFYETLMDKAEIGDVAGD 233
Query: 91 AVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVV 150
TF + LTPRGR+ ++++ S RL+G+ D+KIQYS++ + FLLPK++ HT +V+
Sbjct: 234 TFATFLDVLHLTPRGRFDIDMYESSFRLRGKTYDYKIQYSAIKKFFLLPKNDDTHTLIVL 293
Query: 151 TLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTI 210
LDPP+R+GQT YP +V+Q + D + E+ M+E++L +YKD+L+P Y+ IH+V T +
Sbjct: 294 GLDPPLRQGQTRYPFLVMQLKLDEEISLEMNMTEDILKDQYKDRLQPHYEEPIHQVVTKV 353
Query: 211 LRGLSGAKITKPGKFRSAQDGY-AVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDY 269
RGLSG K+ P K S+ G+ VK S+KA +G+LY L+KS F+PKP T I E I
Sbjct: 354 FRGLSGKKVIMPSKDFSSHHGHQGVKCSIKANEGLLYFLDKSLMFVPKPATYIQLENIAI 413
Query: 270 VEFERHAAGGSNMHYFDLLIRLKTE-QEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMK 328
V R S FD+ + LK EH F NI R E +L DF K ++I N +
Sbjct: 414 VTMSRVGGAVSASRTFDITVSLKGGLGEHQFSNINREEQKSLEDFFKAKSIRIKNEMAEE 473
Query: 329 TTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE----------SDEEDSDFVADKDDGGSP 378
+AA L D+DA+ E + + G + + +SD + D
Sbjct: 474 AAGLIAAAL---DNDAMGSSDEEARPDRGSADEDEESVDEDFAGSSESDVAEEFDSDHES 530
Query: 379 TDDSGEEDSDASESG-GEKEKPAKK 402
+ DS EE DAS+ G E E+P KK
Sbjct: 531 SGDSDEEMGDASDGGDNEDERPKKK 555
>gi|242803641|ref|XP_002484216.1| structure-specific recognition protein, putative [Talaromyces
stipitatus ATCC 10500]
gi|218717561|gb|EED16982.1| structure-specific recognition protein, putative [Talaromyces
stipitatus ATCC 10500]
Length = 572
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 146/384 (38%), Positives = 211/384 (54%), Gaps = 43/384 (11%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEF----------HVDDTT------GANEK 45
L F V + AFE+ +++S T L GKN+V +EF H++ +T A
Sbjct: 114 LAFNVQNRPAFEIPYSEISNTNLAGKNEVAVEFALPADEKANGHIEGSTKNRGRKAAAGP 173
Query: 46 DSLMEISFHIPNS---NTQFVGD---------------ENHPPAQVFRDKIMSMADVGAG 87
D L+E+ F+IP + + GD E A +F + +M A++G
Sbjct: 174 DELVEMRFYIPGTALKKEKAEGDGAKKEGSEEEGEEEAEEQNAANLFYETLMDKAEIGDV 233
Query: 88 GEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTF 147
+ TF + LTPRGR+ ++++ + RL+G+ D+KIQYSS+ + FLLPK+++ HT
Sbjct: 234 AGDTFATFLDVLHLTPRGRFDIDMYEASFRLRGKTYDYKIQYSSIKKFFLLPKNDEMHTL 293
Query: 148 VVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVF 207
+V+ LDPP+R+GQT YP +V+Q + D V EL M+EELL +YKDKLEP Y+ IH+V
Sbjct: 294 IVLGLDPPLRQGQTRYPFLVMQLKLDEEVSIELNMTEELLRERYKDKLEPRYEEPIHQVI 353
Query: 208 TTILRGLSGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEE 266
T I RGLSG K+ P K F S VK S+KA +G+LY L+KS F+PKP T + E
Sbjct: 354 TKIFRGLSGKKVIMPSKDFVSHHGHSGVKCSIKANEGLLYFLDKSLMFVPKPATYVQIEN 413
Query: 267 IDYVEFERHAAGGSNMHYFDLLIRLKTE-QEHLFRNIQRNEYHNLFDFISGKGLKIMNLG 325
I V R S FD+ + LK EH F NI R E L +F K ++I N
Sbjct: 414 ISVVTMSRVGGAISASRTFDITVSLKGGLGEHQFSNINREEQQPLEEFFKAKNIRIKN-- 471
Query: 326 DMKTTDGVAAVLQ---EDDDDAVD 346
+ D AA+++ E+DD + D
Sbjct: 472 --EMVDDSAALIKAALENDDLSTD 493
>gi|212539794|ref|XP_002150052.1| structure-specific recognition protein, putative [Talaromyces
marneffei ATCC 18224]
gi|210067351|gb|EEA21443.1| structure-specific recognition protein, putative [Talaromyces
marneffei ATCC 18224]
Length = 576
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 147/388 (37%), Positives = 209/388 (53%), Gaps = 42/388 (10%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEF----------HVDDTT------GANEK 45
L F V + AFE+ +++S T L GKN+V +EF H++ +T A
Sbjct: 114 LAFNVQNRPAFEIPYSEISNTNLAGKNEVAVEFALPADEKANGHIEGSTKNRGRKAAAGP 173
Query: 46 DSLMEISFHIPNS---NTQFVGD------------------ENHPPAQVFRDKIMSMADV 84
D L+E+ F+IP + + GD E A +F + +M A++
Sbjct: 174 DELVEMRFYIPGTALKKEKAEGDGVKKEGSEEEGEAEGEELEEQNAANLFYETLMDKAEI 233
Query: 85 GAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQP 144
G + TF + LTPRGR+ ++++ + RL+G+ D+KIQYSS+ + FLLPK+++
Sbjct: 234 GDVAGDTYATFLDVLHLTPRGRFDIDMYEASFRLRGKTYDYKIQYSSIKKFFLLPKNDEM 293
Query: 145 HTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIH 204
HT +V+ LDPP+R+GQT YP +V+Q + D V EL M+EELL +YKDKLEP Y+ IH
Sbjct: 294 HTLIVLGLDPPLRQGQTRYPFLVMQLKLDEEVSIELNMTEELLRERYKDKLEPRYEEPIH 353
Query: 205 EVFTTILRGLSGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLIL 263
+V T I RGLSG K+ P K F S VK S+KA +G+LY L+KS F+PKP T +
Sbjct: 354 QVITKIFRGLSGKKVIMPSKDFVSHHGHSGVKCSIKANEGLLYFLDKSLMFVPKPATYVQ 413
Query: 264 HEEIDYVEFERHAAGGSNMHYFDLLIRLKTE-QEHLFRNIQRNEYHNLFDFISGKGLKIM 322
E I V R S FD+ + LK EH F NI R E L +F K ++I
Sbjct: 414 IENISVVTMSRVGGAISASRTFDITVSLKGGLGEHQFSNINREEQQPLEEFFKAKNIRIK 473
Query: 323 NLGDMKTTDGVAAVLQEDD---DDAVDP 347
N + + A L+ DD DD V P
Sbjct: 474 NEMVDDSAALIKAALENDDLSSDDDVRP 501
>gi|242803647|ref|XP_002484217.1| structure-specific recognition protein, putative [Talaromyces
stipitatus ATCC 10500]
gi|218717562|gb|EED16983.1| structure-specific recognition protein, putative [Talaromyces
stipitatus ATCC 10500]
Length = 499
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 146/384 (38%), Positives = 211/384 (54%), Gaps = 43/384 (11%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEF----------HVDDTT------GANEK 45
L F V + AFE+ +++S T L GKN+V +EF H++ +T A
Sbjct: 41 LAFNVQNRPAFEIPYSEISNTNLAGKNEVAVEFALPADEKANGHIEGSTKNRGRKAAAGP 100
Query: 46 DSLMEISFHIPNS---NTQFVGD---------------ENHPPAQVFRDKIMSMADVGAG 87
D L+E+ F+IP + + GD E A +F + +M A++G
Sbjct: 101 DELVEMRFYIPGTALKKEKAEGDGAKKEGSEEEGEEEAEEQNAANLFYETLMDKAEIGDV 160
Query: 88 GEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTF 147
+ TF + LTPRGR+ ++++ + RL+G+ D+KIQYSS+ + FLLPK+++ HT
Sbjct: 161 AGDTFATFLDVLHLTPRGRFDIDMYEASFRLRGKTYDYKIQYSSIKKFFLLPKNDEMHTL 220
Query: 148 VVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVF 207
+V+ LDPP+R+GQT YP +V+Q + D V EL M+EELL +YKDKLEP Y+ IH+V
Sbjct: 221 IVLGLDPPLRQGQTRYPFLVMQLKLDEEVSIELNMTEELLRERYKDKLEPRYEEPIHQVI 280
Query: 208 TTILRGLSGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEE 266
T I RGLSG K+ P K F S VK S+KA +G+LY L+KS F+PKP T + E
Sbjct: 281 TKIFRGLSGKKVIMPSKDFVSHHGHSGVKCSIKANEGLLYFLDKSLMFVPKPATYVQIEN 340
Query: 267 IDYVEFERHAAGGSNMHYFDLLIRLKTEQ-EHLFRNIQRNEYHNLFDFISGKGLKIMNLG 325
I V R S FD+ + LK EH F NI R E L +F K ++I N
Sbjct: 341 ISVVTMSRVGGAISASRTFDITVSLKGGLGEHQFSNINREEQQPLEEFFKAKNIRIKN-- 398
Query: 326 DMKTTDGVAAVLQ---EDDDDAVD 346
+ D AA+++ E+DD + D
Sbjct: 399 --EMVDDSAALIKAALENDDLSTD 420
>gi|195436362|ref|XP_002066137.1| GK22092 [Drosophila willistoni]
gi|194162222|gb|EDW77123.1| GK22092 [Drosophila willistoni]
Length = 730
Score = 238 bits (607), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 143/353 (40%), Positives = 196/353 (55%), Gaps = 13/353 (3%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F K FEV LA VSQ + GKN+V LEFH +D L+E+ FHIP +
Sbjct: 118 VLSFDKDTKTIFEVPLAHVSQC-VTGKNEVTLEFHQNDDAPVG----LLEMRFHIPAVES 172
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
DE+ P F +M+ A V + E++ F I ILTPRGRY +++ +F +L G
Sbjct: 173 ---ADED--PVDKFHQNVMNKASVISASGESIAIFREIQILTPRGRYDIKIFSTFFQLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI SV+RLF+LP + F V++LDPPI++GQT Y ++VL F D EL
Sbjct: 228 KTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLDPPIKQGQTRYHYLVLLFAPDEETTIEL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
SE L KY+ KLE G ++EV +++ L G KIT PG F AV S KA
Sbjct: 288 PFSEAELKDKYEGKLEKELSGPVYEVMGKVMKVLIGRKITGPGNFIGHSGTAAVGCSFKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLE+ F ++ KPP I EEI V F R +GGS FD I LK H+F
Sbjct: 348 AAGYLYPLERGFIYIHKPPLHIRFEEISSVNFAR--SGGST-RSFDFEITLKNGTVHIFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIK 353
+I++ EY LFDFI+ K L + N+G K+ D+++ D +L R+K
Sbjct: 405 SIEKEEYAKLFDFITKKKLHVSNMGKDKSGYKDVDFGDSDNENEPDAYLARLK 457
>gi|119189221|ref|XP_001245217.1| hypothetical protein CIMG_04658 [Coccidioides immitis RS]
gi|392868116|gb|EAS33860.2| FACT complex subunit pob3 [Coccidioides immitis RS]
Length = 571
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 133/371 (35%), Positives = 203/371 (54%), Gaps = 31/371 (8%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANE----------------- 44
L+F V + AFE+ ++++ T L G+N+V +EF + G++
Sbjct: 114 LSFNVQNRPAFEIPYSEITNTNLAGRNEVAVEFSLSTDNGSHGVNGQPERTKNYGKKAGA 173
Query: 45 -KDSLMEISFHIPNSNT---QFVGD---------ENHPPAQVFRDKIMSMADVGAGGEEA 91
KD L+E+ F+IP + Q GD E A +F + +M A++G +
Sbjct: 174 GKDELVEMRFYIPGTAVKKDQADGDDKSVDGEEPEELNAANLFYETLMEKAEIGEVAGDT 233
Query: 92 VVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVT 151
TF + LTPRGR+ ++++ + LRL+G+ D+KIQY S+ + FLLPK++ HT + +
Sbjct: 234 FATFPDVLHLTPRGRFDIDMYENSLRLRGKTYDYKIQYQSIKKFFLLPKNDDTHTLITIG 293
Query: 152 LDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTIL 211
LDPP+R+GQT YP +V+Q + D +L M++ELL T+YKDKL+ Y+ IH+V T +
Sbjct: 294 LDPPLRQGQTRYPFLVMQLKLDDEYNLDLNMTDELLQTRYKDKLQAHYEEPIHQVITKVF 353
Query: 212 RGLSGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYV 270
RGLSG K+ P K F S + +K S+KA +G+L+ L+KSF F+PKP T + E I +
Sbjct: 354 RGLSGKKVIMPSKDFTSHHNHRGIKCSIKANEGLLFCLDKSFMFVPKPATYVQIENISVI 413
Query: 271 EFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTT 330
R S FD+ + LK EH F NI R E L F K ++ N T+
Sbjct: 414 TMSRVGGAVSASRTFDITMTLKGGGEHQFSNINREEQQPLELFFKAKNIRFKNEMAEDTS 473
Query: 331 DGVAAVLQEDD 341
+AA L D+
Sbjct: 474 ALIAAALDNDE 484
>gi|171686954|ref|XP_001908418.1| hypothetical protein [Podospora anserina S mat+]
gi|170943438|emb|CAP69091.1| unnamed protein product [Podospora anserina S mat+]
Length = 567
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 143/419 (34%), Positives = 229/419 (54%), Gaps = 29/419 (6%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANE--------------KDS 47
LTF V + AFE+ +++S T L G+N++ +EF V + A + KD
Sbjct: 117 LTFNVQNRPAFEIPYSEISNTNLAGRNEIAVEFAVGEGGKAGQNGATPGKGKKASAGKDQ 176
Query: 48 LMEISFHIPNSNTQF----------VGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEG 97
++E+ F+IP + T+ +E +F D ++ A++G + + TF
Sbjct: 177 MVEMRFYIPGTTTRKEAEGGDAGSDADEEEKNAVTLFYDTLIEKAEIGESAGDTIATFLD 236
Query: 98 IAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIR 157
+ LTPRGR+ ++++ + RL+G+ D+KIQY ++ + +LPK ++ H + + LDPP+R
Sbjct: 237 VLHLTPRGRFDIDMYDTSFRLRGKTYDYKIQYEAIKKFMVLPKPDEVHYLLCIGLDPPLR 296
Query: 158 KGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGA 217
+GQT YP +V+QF+TD V +L + EE LN KYK KLE Y+ +H V I RGL+G
Sbjct: 297 QGQTRYPFLVMQFKTDEEVTLDLNLPEEDLNEKYKGKLESHYEQPLHSVVAQIFRGLAGK 356
Query: 218 KITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHA 276
KI P K F++ + +K S+KA +G LY LEK+F F+PKP T I +++ + F R
Sbjct: 357 KILSPAKNFQTHRAQSGIKCSIKASEGFLYCLEKAFMFVPKPATYIAYDQTQSITFSRVG 416
Query: 277 AGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAV 336
S + FD+ + +K F NI R + L DF KGL++ N D + + +AA
Sbjct: 417 GAVSALSTFDITVHMKGGGNSQFSNINREDLKGLEDFFQYKGLRVKNEID-EDANMLAAA 475
Query: 337 LQEDDDDAVDPHLERIKNEAGG--DESDEEDSDFVADKDDGGSPTDDSGEEDSDASESG 393
++ +D + D + + K + G ++ + D DF AD D + DS E SD S SG
Sbjct: 476 MRAEDMASSDEEVVQNKADRGSADEDEESVDEDFQADSDSDVAEEYDSNHE-SDGSGSG 533
>gi|156379246|ref|XP_001631369.1| predicted protein [Nematostella vectensis]
gi|156218408|gb|EDO39306.1| predicted protein [Nematostella vectensis]
Length = 451
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 133/352 (37%), Positives = 205/352 (58%), Gaps = 12/352 (3%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQ 61
L F V +K AFE+ L DVSQ G N+V LEFH D + + +LME+ F+IP
Sbjct: 112 LAFEVDKKPAFEIPLKDVSQATTAGNNEVTLEFHQHD----DAEVALMEMRFYIPTPA-- 165
Query: 62 FVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQ 121
++ P F + ++S AD+ +A+VT +A LTPRGRY++++ +F++L G+
Sbjct: 166 ----DSTDPNPTFHEHVLSKADIIQITGDAIVTIPDVACLTPRGRYTMKIFPTFVQLHGK 221
Query: 122 ANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELL 181
D+KI Y++++R+FLLP ++ H F VV++DPPI++GQT YP ++ +F+ D +L
Sbjct: 222 TYDYKIPYTTILRIFLLP--HKDHMFFVVSMDPPIKQGQTRYPFLITRFDKDEHFDVKLN 279
Query: 182 MSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAE 241
+S+E + KY K+E G I+E+ + +++ + G KIT PG F+S Q + S +A
Sbjct: 280 ISKEEMKEKYDGKIEKEMSGAIYEIISRLMKAVVGKKITVPGTFKSHQGVSCITCSHRAG 339
Query: 242 DGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRN 301
G+LYPLE+ F F+ KPP + +EI V F R A G + FD ++ K +F +
Sbjct: 340 SGLLYPLERGFIFIHKPPVHVRFDEISAVNFARVAGAGGHSRSFDFELQTKNGTTIVFSS 399
Query: 302 IQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIK 353
I+R EY LFDF+ K L+I N G + L DDD D +LE +K
Sbjct: 400 IEREEYGRLFDFVRDKKLRIKNTGKSTKEKNIDDDLMGSDDDEHDAYLETVK 451
>gi|303323253|ref|XP_003071618.1| Structure-specific recognition protein [Coccidioides posadasii C735
delta SOWgp]
gi|240111320|gb|EER29473.1| Structure-specific recognition protein [Coccidioides posadasii C735
delta SOWgp]
gi|320035307|gb|EFW17249.1| structure-specific recognition protein [Coccidioides posadasii str.
Silveira]
Length = 571
Score = 238 bits (606), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 133/371 (35%), Positives = 204/371 (54%), Gaps = 31/371 (8%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANE----------------- 44
L+F V + AFE+ ++++ T L G+N+V +EF + G++
Sbjct: 114 LSFNVQNRPAFEIPYSEITNTNLAGRNEVAVEFSLSTDNGSHGVNGQPERTKNYGKKAGA 173
Query: 45 -KDSLMEISFHIPNS---NTQFVGD---------ENHPPAQVFRDKIMSMADVGAGGEEA 91
KD L+E+ F+IP + + Q GD E A +F + +M A++G +
Sbjct: 174 GKDELVEMRFYIPGTAVKDHQADGDDKSVDGEEPEELNAANLFYETLMEKAEIGEVAGDT 233
Query: 92 VVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVT 151
TF + LTPRGR+ ++++ + LRL+G+ D+KIQY S+ + FLLPK++ HT + +
Sbjct: 234 FATFPDVLHLTPRGRFDIDMYENSLRLRGKTYDYKIQYQSIKKFFLLPKNDDTHTLITIG 293
Query: 152 LDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTIL 211
LDPP+R+GQT YP +V+Q + D +L M++ELL T+YKDKL+ Y+ IH+V T +
Sbjct: 294 LDPPLRQGQTRYPFLVMQLKLDDEYNLDLNMTDELLQTRYKDKLQAHYEEPIHQVITKVF 353
Query: 212 RGLSGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYV 270
RGLSG K+ P K F S + +K S+KA +G+L+ L+KSF F+PKP T + E I +
Sbjct: 354 RGLSGKKVIMPSKDFTSHHNHRGIKCSIKANEGLLFCLDKSFMFVPKPATYVQIENISVI 413
Query: 271 EFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTT 330
R S FD+ + LK EH F NI R E L F K ++ N T+
Sbjct: 414 TMSRVGGAVSASRTFDITMTLKGGGEHQFSNINREEQQPLELFFKAKNIRFKNEMAEDTS 473
Query: 331 DGVAAVLQEDD 341
+AA L D+
Sbjct: 474 ALIAAALDNDE 484
>gi|52138889|gb|AAH82613.1| SSRP1 protein [Xenopus laevis]
Length = 458
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 133/353 (37%), Positives = 200/353 (56%), Gaps = 13/353 (3%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F +G + AFE+ L++VSQ GKN+V LEFH +D + + SLMEI F++P +
Sbjct: 118 LLSFDIGDQPAFELPLSNVSQCT-TGKNEVTLEFHQND----DSEVSLMEIRFYVPPTQ- 171
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
D+ + F ++S ADV +AV F + LTPRGRY + ++ +FL L G
Sbjct: 172 ----DDGGDSVEAFAQNVLSKADVIQATGDAVCIFRELQCLTPRGRYDIRIYPTFLHLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI Y++V+RLFLLP +Q F V++LDPPI++GQT Y ++L F D + L
Sbjct: 228 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDMTLTL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
MSEE + +++ KL+ S G ++E+ + +++ L KIT PG F + S KA
Sbjct: 288 NMSEEEVERRFEGKLKKSMSGCLYEMVSRVMKALVNRKITVPGNFLGHSGSQCITCSYKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLE+ F ++ KPP I +EI V F R G + FD I K ++ F
Sbjct: 348 SSGLLYPLERGFIYVHKPPVHIRFDEITCVNFAR---GTTTTRSFDFEIETKQGSQYTFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIK 353
+I+R EY LFDF++ K L I N G + + D+D D +LE+ K
Sbjct: 405 SIEREEYGKLFDFVNAKKLSIKNRGLKEGMKPAYDDYADSDEDQHDAYLEKKK 457
>gi|396467840|ref|XP_003838039.1| hypothetical protein LEMA_P120860.1 [Leptosphaeria maculans JN3]
gi|312214604|emb|CBX94595.1| hypothetical protein LEMA_P120860.1 [Leptosphaeria maculans JN3]
Length = 777
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 156/447 (34%), Positives = 229/447 (51%), Gaps = 47/447 (10%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHV-----------------DDTTGANE 44
LTF V + AFEV +VS T L GKN+V ++F + A
Sbjct: 329 LTFNVANRPAFEVPYTEVSNTNLAGKNEVAVDFSLPPDGDAGANGALGGARFRGKKSAGA 388
Query: 45 KDSLMEISFHIPNSNTQFVGDENHP------------PAQVFRDKIMSMADVGAGGEEAV 92
+D L+E+ F+IP ++ +E+ A +F + +M A++G +
Sbjct: 389 RDQLVEMRFYIPGVASKKEKNEDGEDASGGEEGEETNAASLFYETLMDKAEIGEVAGDTY 448
Query: 93 VTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTL 152
TF I LTPRGR+ ++++ S RL+G+ D+KIQ+ SV + +LPK + HT + + L
Sbjct: 449 ATFLDILHLTPRGRFDIDMYESSFRLRGKTYDYKIQFDSVKKFMVLPKPDDMHTLITIGL 508
Query: 153 DPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILR 212
DPP+R+GQT YP +V+QF+ D V +L M E+LL +KYKDKL+ Y+ I V + I R
Sbjct: 509 DPPLRQGQTRYPFLVMQFKRDEEVNLDLNMKEDLLESKYKDKLQSHYEAPIAVVVSDIFR 568
Query: 213 GLSGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVE 271
GLSG +IT+P + F S + VK S+KA +G L+ L+K+F F+PKP T I + I V
Sbjct: 569 GLSGKRITRPSRDFISHHEQSGVKCSIKANEGHLFCLDKAFMFIPKPATYISMDNIASVT 628
Query: 272 FERHAAGGSNMHYFDLLIRLKTEQ-EHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTT 330
R + FD+ +K EH F NI R E L +F KG+K N +M
Sbjct: 629 MSRVGGAMAASRTFDITFTMKGGMAEHQFSNINREEQQPLENFFRAKGIKTKN--EMADD 686
Query: 331 DG--VAAVLQEDDDDAVDPHLERIKNEAG-----------GDESDEEDSDFVADKDDGGS 377
G +AA LQ++D + D + A D E +F +D GS
Sbjct: 687 SGAILAAALQDEDLASSDDGAPANRGSADEDDESVDEDFQADSESEVGEEFDSDHQSSGS 746
Query: 378 PTDDS-GEEDSDASESGGEKEKPAKKE 403
+D+ G DSDA ES E+P KK+
Sbjct: 747 DSDEEMGGADSDAGESAAMPERPKKKQ 773
>gi|440636043|gb|ELR05962.1| hypothetical protein GMDG_01924 [Geomyces destructans 20631-21]
Length = 552
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 139/385 (36%), Positives = 209/385 (54%), Gaps = 35/385 (9%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHV--DDTTGAN---------------E 44
L F V + AFE+ +++S T L GKN+V +EF + GAN
Sbjct: 114 LAFNVQNRPAFEIPYSEISNTNLAGKNEVAVEFSLPAGGDEGANGSLGGAKGKGKKAGAG 173
Query: 45 KDSLMEISFHIPNSNTQ------------FVGDENHPPAQVFRDKIMSMADVGAGGEEAV 92
KD L+E+ F+IP + T+ +E A +F D +M A++G +
Sbjct: 174 KDQLVEMRFYIPGTTTKKETMEDGEAPSDAEDEEEQNAANLFYDTLMEKAEIGEVAGDTY 233
Query: 93 VTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTL 152
TF + LTPRGR+ ++++ S RL+G+ D+KIQY ++ + +LPK ++ H + + L
Sbjct: 234 ATFLDVLHLTPRGRFDIDMYESSFRLRGKTYDYKIQYEAIKKFMILPKPDELHFMICIGL 293
Query: 153 DPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILR 212
DPP+R+GQT YP +V+QF+ D V +L M+EELL KY++KL P Y+ +H+V T + R
Sbjct: 294 DPPLRQGQTRYPFLVMQFKKDEEVTIDLNMTEELLKEKYENKLAPHYEQPLHQVVTQVFR 353
Query: 213 GLSGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVE 271
GL+G K+ +P K F S Y +K S+KA +G LY LEK+F F+PKP T I ++ + +
Sbjct: 354 GLTGKKVNQPAKDFLSHHQQYGIKCSIKAAEGFLYCLEKAFMFVPKPATYIAYDSVSSIT 413
Query: 272 FERHAAGGSNMHYFDLLIRLK-TEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTT 330
R S FD+ I LK + F NI R E L +F KGL++ N D T+
Sbjct: 414 LSRVGGAISASRTFDIAIHLKGGAGDSQFSNINREEQKPLEEFFKVKGLRVKNEMDEDTS 473
Query: 331 DGVAAVLQED----DDDAVDPHLER 351
AA+ ED D+D V +R
Sbjct: 474 ILAAALGGEDLASSDEDVVAARADR 498
>gi|353235652|emb|CCA67662.1| probable POB3-protein that binds to DNA polymerase I
[Piriformospora indica DSM 11827]
Length = 567
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 160/462 (34%), Positives = 247/462 (53%), Gaps = 37/462 (8%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDT--TGANEKDSLMEISFHIPNSN 59
L F++G K AF++ L V+ + + GK +V LEF D + N D LME+ +IP +
Sbjct: 114 LVFLIGNKPAFDIPLPTVANSNIAGKTEVSLEFIQPDVKRSAKNAPDELMELRMYIPGTQ 173
Query: 60 TQFVGDEN--HPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLR 117
+ GDE AQVF + I AD+G E++V F + + TPRGRY + + +FLR
Sbjct: 174 QKDDGDEGDEQSAAQVFHETIKEKADIGQVTGESIVVFHEVLVTTPRGRYDIHMFPNFLR 233
Query: 118 LQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQ 177
L G+ D+K+ Y+++ RLFLLP++++ + +VV LDPPIR+GQT YP +VL F D +
Sbjct: 234 LHGKTYDYKVPYNTISRLFLLPRADEQNISLVVNLDPPIRQGQTRYPFLVLVFNRDEQMA 293
Query: 178 SELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQD---GYAV 234
+EL + EE L TKY+ +L+ S+ GL +++ + R L G I +P + Q G+ +
Sbjct: 294 AELNIDEETLQTKYEGRLDKSHDGLAYQIIANVYRSLVGKNIARPSSAFAPQSHDPGHPI 353
Query: 235 KSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTE 294
K +LKA G LY LEKS FFL K P LI ++ + R G ++ DL I K
Sbjct: 354 KCNLKAVQGELYFLEKSIFFLSKQPYLINISDVYEIVLTRIGGGLASGKTIDLRIEPKGG 413
Query: 295 QEHLFRNIQRNEYHNLFDFISGKGLKIMNLG---DMKTTDGVAAVLQEDDDDAVDPHLER 351
E F +I + E ++ DF++ KG+++ M G + D +V+ + +
Sbjct: 414 SEVTFSSIDKGEKDHIEDFLTSKGVRVKTEAADEAMAVDLGSDDDEDMESDRSVEEDVPK 473
Query: 352 IKNEAGGDESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSSV 411
+ GG D+EDS + D+ GSPT S + + + S + P KK+ K+++S
Sbjct: 474 PRAPGGG--GDDEDSSEASTSDE-GSPTSSSDDSEEGSDAS----DSPVKKKKKRDNS-- 524
Query: 412 KASTSKKKSR-DG----------------DEDGKKKKQKKKK 436
AS S KKS+ DG D DG+ +KKK+
Sbjct: 525 -ASPSPKKSKSDGTKPKPKPKPKVSADKDDSDGEGPAKKKKR 565
>gi|327350230|gb|EGE79087.1| hypothetical protein BDDG_02025 [Ajellomyces dermatitidis ATCC
18188]
Length = 556
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 137/374 (36%), Positives = 205/374 (54%), Gaps = 34/374 (9%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFH-----VDDTTGANE------------ 44
L F V + AFE+ +++S T L GKN+V +EF V+ TTG +E
Sbjct: 102 LAFNVQNRPAFEIPYSEISNTNLAGKNEVAVEFSLPTDGVNGTTGQSEGGTKNRGRKAGA 161
Query: 45 -KDSLMEISFHIPNS------------NTQFVGDE--NHPPAQVFRDKIMSMADVGAGGE 89
+D L+E+ F+IP + + G+E A +F + +M A++G
Sbjct: 162 GRDELVEMRFYIPGTALKKEKPEGEEDDESVDGEEAEEQNAANLFYETLMDKAEIGDVAG 221
Query: 90 EAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVV 149
+ TF + LTPRGR+ ++++ S RL+G+ D+KIQY S+ + FLLPK++ HT +
Sbjct: 222 DTFATFLDVLHLTPRGRFDIDMYESSFRLRGKTYDYKIQYQSIKKFFLLPKNDDTHTLIT 281
Query: 150 VTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTT 209
+ LDPP+R+GQT YP +V+Q + D + +L M++ELL T+YKDKLE Y+ IH+V T
Sbjct: 282 LGLDPPLRQGQTRYPFLVMQLKLDDEISIDLNMTDELLQTRYKDKLEAHYEEPIHQVVTK 341
Query: 210 ILRGLSGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEID 268
+ RGLSG K+ P + F S VK S+KA +G+L+ L+KSF F+PKP T + E I
Sbjct: 342 VFRGLSGKKVVMPSRDFVSHHGHSGVKCSIKANEGLLFCLDKSFMFVPKPATYVQIENIS 401
Query: 269 YVEFERHAAGGSNMHYFDLLIRLKTEQ-EHLFRNIQRNEYHNLFDFISGKGLKIMNLGDM 327
+ R S FD+ + LK EH F NI R E L +F K ++ N
Sbjct: 402 VITMSRVGGAISASRTFDITMTLKGGMGEHQFSNINREEQQPLEEFFKAKNIRFKNEMAD 461
Query: 328 KTTDGVAAVLQEDD 341
++ +AA L DD
Sbjct: 462 DSSALLAAALNNDD 475
>gi|358337037|dbj|GAA55457.1| structure-specific recognition protein 1 [Clonorchis sinensis]
Length = 723
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 165/536 (30%), Positives = 268/536 (50%), Gaps = 40/536 (7%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L V +FE+ LA++S L KN+++ EFH++D + + L E+ + P +
Sbjct: 128 VLEMSVKNSMSFEIPLANLSNATLN-KNEIVFEFHLND----DAEICLSEMRLYTPGTEA 182
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
G A + K+ AD+ + +V F+ + L PRGRY V+L+ SF+ L G
Sbjct: 183 DRDGK-----APIIYSKVTEKADIIQVTGDFLVEFKQLQCLQPRGRYDVKLYPSFIHLHG 237
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
++ DFK+ S++ RL +LP + F V+ LDPPI+ GQT Y +++ F+ D V ++
Sbjct: 238 KSFDFKVPKSTITRLLMLPHPDNRQVFFVLQLDPPIKHGQTRYHFVIMLFDKDSHVDLDM 297
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRG-------LSGAKITKPGKFRSAQDGYA 233
SEE L + KL + G EV I + L K+T PG F + G A
Sbjct: 298 AASEEWLQEHFDGKLTQNIAGPECEVVARIFKASSFEFSVLFDQKVTVPGAFSAKNGGSA 357
Query: 234 VKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKT 293
V S KA G+LYPLE+ F F+P+PP I +EI V+F R G FD + +
Sbjct: 358 VACSYKASVGLLYPLERGFTFVPRPPVSIRFDEIITVQFSR---GTGAQRSFDFEVETRN 414
Query: 294 EQEHLFRNIQRNEYHNLFDFISGKGLKIMNL-GDMKTTDGVAAVLQED----DDDAVDPH 348
H F +I RNEYH L+DF++ K L++ N+ + + G A ED +++ D +
Sbjct: 415 GLTHTFTSIDRNEYHQLYDFVTSKKLRVKNIDSESRAGGGSGATAAEDAWSSSEESHDAY 474
Query: 349 LERIKNEAGGDESDEEDSDFVADKDDGGSPTDDSG----EEDSDASESGGEKEKPAKKES 404
+E++K EA + + +D D + D+ P D+S E+ D++ + + +
Sbjct: 475 MEKVKTEARERQVEMDDDDDDDEDDEDFKPPDESDASELAEEYDSNVETTSSAEESDSSA 534
Query: 405 KKESSSVKASTSKKKSR--------DGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMER 456
S + KKSR + ++ K+K+ KDPNAP R + +I + R
Sbjct: 535 SGSGSGSEPEPQPKKSRPVPKEKPPAKPKATERPKKKRVKDPNAPSRPPTAYIMWFNEHR 594
Query: 457 ENIKKS--NPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYKN 510
+ I KS NP + +V + GERW+ + E + Y+++ KK Y+ E+ Y+N
Sbjct: 595 DEISKSIGNP-TSVAEVAKAAGERWRNIDSETKAKYQARVDELKKNYESEMRIYRN 649
>gi|350635490|gb|EHA23851.1| hypothetical protein ASPNIDRAFT_40088 [Aspergillus niger ATCC 1015]
Length = 724
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 140/383 (36%), Positives = 205/383 (53%), Gaps = 38/383 (9%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDD----------------TTGANEK 45
L+F V + AFE+ +++S T L GKN+V +EF + A+
Sbjct: 262 LSFNVQNRPAFEIPYSEISNTNLAGKNEVAVEFALGGEGNEPAKPAGSTKNRGRKAASGP 321
Query: 46 DSLMEISFHIPNSNTQF---VGDENHPPA-----------------QVFRDKIMSMADVG 85
D L+E+ F+IP + + + +EN A +F + +M A++G
Sbjct: 322 DELVEMRFYIPGTAVKTEKGIKEENAETADEENGAEEEEGEEQNAANLFYEMLMDKAEIG 381
Query: 86 AGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPH 145
+ TF + LTPRGR+ ++++ S RL+G+ D+KIQY+S+ + FLLPK++ H
Sbjct: 382 DVAGDTFATFLDVLHLTPRGRFDIDMYESSFRLRGKTYDYKIQYASIKKFFLLPKNDDTH 441
Query: 146 TFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHE 205
T +V+ LDPP+R+GQT YP +V+Q + D + EL M++ELL T+YKDKLEP Y+ IH+
Sbjct: 442 TLIVLGLDPPLRQGQTRYPFLVMQLKLDEEISLELNMTDELLETRYKDKLEPRYEEPIHQ 501
Query: 206 VFTTILRGLSGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILH 264
V T I RGLSG K+ P K F S VK S+KA +G+LY L+KS F+PKP T I
Sbjct: 502 VVTKIFRGLSGKKVIMPSKDFVSHHGHSGVKCSIKANEGLLYFLDKSLIFVPKPATYIQI 561
Query: 265 EEIDYVEFERHAAGGSNMHYFDLLIRLKTEQ-EHLFRNIQRNEYHNLFDFISGKGLKIMN 323
E I + R S FD+ + LK EH F NI R E L +F K ++ N
Sbjct: 562 ENIAIITMSRVGGAISASRTFDITVSLKAGLGEHQFSNINREEQQPLEEFFKAKNIRFKN 621
Query: 324 LGDMKTTDGVAAVLQEDDDDAVD 346
+ +AA L DD + D
Sbjct: 622 EMSDDASALIAAALDNDDMGSSD 644
>gi|195025405|ref|XP_001986052.1| GH21151 [Drosophila grimshawi]
gi|193902052|gb|EDW00919.1| GH21151 [Drosophila grimshawi]
Length = 744
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 140/353 (39%), Positives = 196/353 (55%), Gaps = 13/353 (3%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F K FEV L+ VSQ + GKN+V LEFH +D L+E+ FHIP +
Sbjct: 118 VLSFDKDTKTIFEVPLSHVSQC-VTGKNEVTLEFHQNDDAPVG----LLEMRFHIPTVES 172
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
DE+ P F +M+ A V + E++ F I ILTPRGRY +++ +F +L G
Sbjct: 173 ---ADED--PVDKFHQNVMNKASVISASGESIAIFREIHILTPRGRYDIKIFSTFFQLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI SV+RLF+LP + F V++LDPPI++GQT Y ++VL F D EL
Sbjct: 228 KTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLDPPIKQGQTRYHYLVLLFAPDEDTTIEL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
SE L KY+ KLE G ++EV +++ L G KIT PG F AV S KA
Sbjct: 288 PFSEAELRDKYEGKLEKELSGPVYEVMGKVMKVLIGRKITGPGNFIGHSGTAAVGCSFKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLE+ F ++ KPP I EEI V F R +GGS FD + LK H+F
Sbjct: 348 AAGYLYPLERGFIYIHKPPLHIRFEEISSVNFAR--SGGST-RSFDFEVTLKNGTVHIFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIK 353
+I++ EY LFD+I+ K L + N+G K+ D+++ D +L R+K
Sbjct: 405 SIEKEEYAKLFDYITQKKLHVSNMGKDKSGYKDVDFGDSDNENEPDAYLARLK 457
>gi|358369525|dbj|GAA86139.1| structure-specific recognition protein [Aspergillus kawachii IFO
4308]
Length = 594
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 154/431 (35%), Positives = 225/431 (52%), Gaps = 44/431 (10%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDD----------------TTGANEK 45
L+F V + AFE+ +++S T L GKN+V +EF + A+
Sbjct: 132 LSFNVQNRPAFEIPYSEISNTNLAGKNEVAVEFALGGEGNEPAKPAGSTKNRGRKAASGP 191
Query: 46 DSLMEISFHIPNSNTQF---VGDEN--HP---------------PAQVFRDKIMSMADVG 85
D L+E+ F+IP + + + +EN +P A +F + +M A++G
Sbjct: 192 DELVEMRFYIPGTAVKTEKGIKEENAENPDEENGAEEEEGEEQNAANLFYEMLMDKAEIG 251
Query: 86 AGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPH 145
+ TF + LTPRGR+ ++++ S RL+G+ D+KIQY+S+ + FLLPK++ H
Sbjct: 252 DVAGDTFATFLDVLHLTPRGRFDIDMYESSFRLRGKTYDYKIQYASIKKFFLLPKNDDTH 311
Query: 146 TFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHE 205
T +V+ LDPP+R+GQT YP +V+Q + D + EL M++ELL T+YKDKLEP Y+ IH+
Sbjct: 312 TLIVLGLDPPLRQGQTRYPFLVMQLKLDEEISLELNMTDELLETRYKDKLEPRYEEPIHQ 371
Query: 206 VFTTILRGLSGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILH 264
V T I RGLSG K+ P K F S VK S+KA +G+LY L+KS F+PKP T I
Sbjct: 372 VVTKIFRGLSGKKVIMPSKDFVSHHGHSGVKCSIKANEGLLYFLDKSLIFVPKPATYIQI 431
Query: 265 EEIDYVEFERHAAGGSNMHYFDLLIRLKTE-QEHLFRNIQRNEYHNLFDFISGKGLKIMN 323
E I + R S FD+ + LK EH F NI R E L +F K ++ N
Sbjct: 432 ENIAIITMSRVGGAISASRTFDITVSLKAGLGEHQFSNINREEQQPLEEFFKAKNIRFKN 491
Query: 324 LGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDESDEEDSDFVADKDDGGSPTDDSG 383
+ +AA L DD + D R + ++ + D DF A+ D D
Sbjct: 492 EMSDDASALIAAALDNDDMGSSDDEGVRADRGSADEDEESIDEDFQAESD------SDVA 545
Query: 384 EEDSDASESGG 394
EE A ES G
Sbjct: 546 EEYDSAHESSG 556
>gi|261196620|ref|XP_002624713.1| FACT complex subunit pob3 [Ajellomyces dermatitidis SLH14081]
gi|239595958|gb|EEQ78539.1| FACT complex subunit pob3 [Ajellomyces dermatitidis SLH14081]
Length = 576
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 137/374 (36%), Positives = 205/374 (54%), Gaps = 34/374 (9%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFH-----VDDTTGANE------------ 44
L F V + AFE+ +++S T L GKN+V +EF V+ TTG +E
Sbjct: 122 LAFNVQNRPAFEIPYSEISNTNLAGKNEVAVEFSLPTDGVNGTTGQSEGGTKNRGRKAGA 181
Query: 45 -KDSLMEISFHIPNS------------NTQFVGDE--NHPPAQVFRDKIMSMADVGAGGE 89
+D L+E+ F+IP + + G+E A +F + +M A++G
Sbjct: 182 GRDELVEMRFYIPGTALKKEKPEGEEDDESVDGEEAEEQNAANLFYETLMDKAEIGDVAG 241
Query: 90 EAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVV 149
+ TF + LTPRGR+ ++++ S RL+G+ D+KIQY S+ + FLLPK++ HT +
Sbjct: 242 DTFATFLDVLHLTPRGRFDIDMYESSFRLRGKTYDYKIQYQSIKKFFLLPKNDDTHTLIT 301
Query: 150 VTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTT 209
+ LDPP+R+GQT YP +V+Q + D + +L M++ELL T+YKDKLE Y+ IH+V T
Sbjct: 302 LGLDPPLRQGQTRYPFLVMQLKLDDEISIDLNMTDELLQTRYKDKLEAHYEEPIHQVVTK 361
Query: 210 ILRGLSGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEID 268
+ RGLSG K+ P + F S VK S+KA +G+L+ L+KSF F+PKP T + E I
Sbjct: 362 VFRGLSGKKVVMPSRDFVSHHGHSGVKCSIKANEGLLFCLDKSFMFVPKPATYVQIENIS 421
Query: 269 YVEFERHAAGGSNMHYFDLLIRLKTEQ-EHLFRNIQRNEYHNLFDFISGKGLKIMNLGDM 327
+ R S FD+ + LK EH F NI R E L +F K ++ N
Sbjct: 422 VITMSRVGGAISASRTFDITMTLKGGMGEHQFSNINREEQQPLEEFFKAKNIRFKNEMAD 481
Query: 328 KTTDGVAAVLQEDD 341
++ +AA L DD
Sbjct: 482 DSSALLAAALNNDD 495
>gi|239609535|gb|EEQ86522.1| FACT complex subunit pob3 [Ajellomyces dermatitidis ER-3]
Length = 579
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 137/374 (36%), Positives = 205/374 (54%), Gaps = 34/374 (9%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFH-----VDDTTGANE------------ 44
L F V + AFE+ +++S T L GKN+V +EF V+ TTG +E
Sbjct: 125 LAFNVQNRPAFEIPYSEISNTNLAGKNEVAVEFSLPTDGVNGTTGQSEGGTKNRGRKAGA 184
Query: 45 -KDSLMEISFHIPNS------------NTQFVGDE--NHPPAQVFRDKIMSMADVGAGGE 89
+D L+E+ F+IP + + G+E A +F + +M A++G
Sbjct: 185 GRDELVEMRFYIPGTALKKEKPEGEEDDESVDGEEAEEQNAANLFYETLMDKAEIGDVAG 244
Query: 90 EAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVV 149
+ TF + LTPRGR+ ++++ S RL+G+ D+KIQY S+ + FLLPK++ HT +
Sbjct: 245 DTFATFLDVLHLTPRGRFDIDMYESSFRLRGKTYDYKIQYQSIKKFFLLPKNDDTHTLIT 304
Query: 150 VTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTT 209
+ LDPP+R+GQT YP +V+Q + D + +L M++ELL T+YKDKLE Y+ IH+V T
Sbjct: 305 LGLDPPLRQGQTRYPFLVMQLKLDDEISIDLNMTDELLQTRYKDKLEAHYEEPIHQVVTK 364
Query: 210 ILRGLSGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEID 268
+ RGLSG K+ P + F S VK S+KA +G+L+ L+KSF F+PKP T + E I
Sbjct: 365 VFRGLSGKKVVMPSRDFVSHHGHSGVKCSIKANEGLLFCLDKSFMFVPKPATYVQIENIS 424
Query: 269 YVEFERHAAGGSNMHYFDLLIRLKTEQ-EHLFRNIQRNEYHNLFDFISGKGLKIMNLGDM 327
+ R S FD+ + LK EH F NI R E L +F K ++ N
Sbjct: 425 VITMSRVGGAISASRTFDITMTLKGGMGEHQFSNINREEQQPLEEFFKAKNIRFKNEMAD 484
Query: 328 KTTDGVAAVLQEDD 341
++ +AA L DD
Sbjct: 485 DSSALLAAALNNDD 498
>gi|268565525|ref|XP_002639471.1| Hypothetical protein CBG04066 [Caenorhabditis briggsae]
Length = 689
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 168/521 (32%), Positives = 273/521 (52%), Gaps = 47/521 (9%)
Query: 12 FEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFVGDENHPP- 70
FE+ +VSQ + KN+ +LEFH + N SLME+ FH+P V EN
Sbjct: 128 FEIPCTNVSQC-VANKNEAVLEFHQHE----NNPISLMEMRFHMP------VDPENEDDI 176
Query: 71 --AQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQ 128
+ F+ +++ A + A E+ + I TPRGRY ++++ + + L G+ D+KI
Sbjct: 177 DRVEEFKQAVLAYAGLEAETEQPITLLSDILCTTPRGRYDIKVYPTSIALHGKTYDYKIP 236
Query: 129 YSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLN 188
++ RLFL+P + H + V+ L+PPIR+GQT Y ++V +F D + E+ ++++ L
Sbjct: 237 VKTITRLFLVPHKDGRHVYFVLALNPPIRQGQTRYTYLVFEFVKDDDQEMEIALTDD-LK 295
Query: 189 TKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPL 248
KY +L+ G ++E + + + + K+T PG+F + A++ S K G+LYPL
Sbjct: 296 EKYGGQLKSEMDGPLYENVSILFKVVCNLKVTVPGRFIGSSGTPAIQCSHKQNPGLLYPL 355
Query: 249 EKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYH 308
EK F F+ KP I EEI F R A G+ FD I +K+ Q +F +++ E H
Sbjct: 356 EKGFLFIHKPVMYIRLEEISSCHFARSDA-GTVTRTFDFEIDMKSGQSVMFNAMEKEENH 414
Query: 309 NLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDESDEE---- 364
LFD+++ K +KI N ++ V + DD +DP+ +K E G E ++
Sbjct: 415 KLFDYLNKKEIKIRNSQRLEKNQHV-----DSSDDEIDPYTNTVKAEGRGREESDDDEST 469
Query: 365 ------DSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSSVKASTSKK 418
D D K D S ++ SG E D +SG EK+ ES+ + +V+ KK
Sbjct: 470 DEDYDLDKDIKNQKKDRDS-SEGSGSEPDDEYDSGSEKDSSGTGESEPDDENVRP---KK 525
Query: 419 KSR----------DGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAF 468
KS ++ GKK+K KK+KDPN PKRA + + + R ++K+ G
Sbjct: 526 KSEVNSEKKSKKEKPEKVGKKRKGKKEKDPNEPKRAATAYFLWFNANRASLKED--GDTV 583
Query: 469 TDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
+V + G +WK+MS ++++ +E KA DK RY++E+ YK
Sbjct: 584 PEVAKKGGAKWKEMSADDKKEWEQKAAQDKIRYENEMKEYK 624
>gi|325092774|gb|EGC46084.1| FACT complex subunit pob3 [Ajellomyces capsulatus H88]
Length = 575
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 137/374 (36%), Positives = 204/374 (54%), Gaps = 34/374 (9%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHV--DDTTGANE--------------- 44
L F V + AFE+ +++S T L GKN+V +EF + D TGAN
Sbjct: 121 LAFNVQNRPAFEIPYSEISNTNLAGKNEVAVEFSLPADGVTGANGQLEGSTKNRGRKAGA 180
Query: 45 -KDSLMEISFHIPNS-----NTQFVGDEN---------HPPAQVFRDKIMSMADVGAGGE 89
+D L+E+ F+IP + + DEN A +F + +M A++G
Sbjct: 181 GRDELVEMRFYIPGTALKKEKPEGEEDENGVDGEEAEEQNAANLFYETLMDKAEIGDVAG 240
Query: 90 EAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVV 149
+ TF + LTPRGR+ ++++ S RL+G+ D+KIQY S+ + FLLPK++ HT +
Sbjct: 241 DTFATFLDVLHLTPRGRFDIDMYESSFRLRGKTYDYKIQYQSIKKFFLLPKNDDTHTLIT 300
Query: 150 VTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTT 209
+ LDPP+R+GQT YP +V+Q + D + +L M++ELL T+YKDKLE Y+ IH+V T
Sbjct: 301 LGLDPPLRQGQTRYPFLVMQLKLDDEISIDLNMTDELLQTRYKDKLEAHYEEPIHQVVTK 360
Query: 210 ILRGLSGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEID 268
+ RGLSG K+ P + F S VK S+KA +G+L+ L+KSF F+PKP T + E I
Sbjct: 361 VFRGLSGKKVVMPSRDFVSHHGHSGVKCSIKANEGLLFCLDKSFMFVPKPATYVQIENIS 420
Query: 269 YVEFERHAAGGSNMHYFDLLIRLKTEQ-EHLFRNIQRNEYHNLFDFISGKGLKIMNLGDM 327
+ R S FD+ + LK EH F NI R E L +F K ++ N
Sbjct: 421 VITMSRVGGAISASRTFDITMTLKGGMGEHQFSNINREEQQPLEEFFKAKNIRFKNEMAD 480
Query: 328 KTTDGVAAVLQEDD 341
++ +AA L D+
Sbjct: 481 DSSALIAAALDNDE 494
>gi|255724304|ref|XP_002547081.1| hypothetical protein CTRG_01387 [Candida tropicalis MYA-3404]
gi|240134972|gb|EER34526.1| hypothetical protein CTRG_01387 [Candida tropicalis MYA-3404]
Length = 537
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 148/426 (34%), Positives = 228/426 (53%), Gaps = 35/426 (8%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEK-DSLMEISFHIPNS-- 58
L F V K +FE+ +++ + L GKN+V +E ++D AN D ++E+ F++P +
Sbjct: 124 LVFNVNNKPSFEIPYENINNSNLTGKNEVSIELNLD----ANRYGDEIVEMRFYVPGTIE 179
Query: 59 NTQFVGDENH------------PPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGR 106
N V EN+ AQ F +++ AD+G EA+V+F + LTPRGR
Sbjct: 180 NETVVKSENNGEIVEEEVVNETSAAQQFYEQLKDKADIGQVAGEAIVSFSDVLFLTPRGR 239
Query: 107 YSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHI 166
Y ++++ + LRL+G+ D+KIQY + R+F LPK + H +++ +DPP+R+GQT YP +
Sbjct: 240 YDIDMYPTSLRLRGKTYDYKIQYEQIERIFSLPKPDDDHHLLILQIDPPLRQGQTRYPFL 299
Query: 167 VLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFR 226
VLQF D + EL +SEE KYKD+L+ +Y V LRGL+ K+ PG F+
Sbjct: 300 VLQFVRDEETELELNVSEEDFEKKYKDRLKKTYDAPTPVVMAHCLRGLTERKLITPGSFQ 359
Query: 227 SAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFD 286
S + S+KA +G LYPL++ F F+ KP I + EI + R G S FD
Sbjct: 360 SRYLQAGISCSVKASEGHLYPLDRCFLFVTKPTLYIPYSEISSIVMSRTGGGVSASRTFD 419
Query: 287 LLIR-LKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAV 345
L + + + Q H+F +I R E + +F KG+K+ N + A+ QE A
Sbjct: 420 LEVNVIGSNQSHIFGSIDREEQETIENFCKEKGIKVKNEEKLAKARLAKALEQE----AN 475
Query: 346 DPHLERIKNEAGGDESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEK------EKP 399
D + + DE E+D DF GS +D + E DSDA+ S G++ E+P
Sbjct: 476 DDDDDADVDMGSADEDSEDDGDF-----QSGSDSDVAEEFDSDAASSSGDEDMSDKDERP 530
Query: 400 AKKESK 405
KK++K
Sbjct: 531 PKKKAK 536
>gi|380495597|emb|CCF32272.1| FACT complex subunit pob-3 [Colletotrichum higginsianum]
Length = 570
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 133/388 (34%), Positives = 218/388 (56%), Gaps = 34/388 (8%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHV---DDTTGAN--------------- 43
L+F V + AFE+ +++S T L G+N+V +EF + TG N
Sbjct: 117 LSFNVQNRPAFEIPYSEISNTNLAGRNEVAVEFSAPTDQNDTGTNGHLGGARGKGKKAGA 176
Query: 44 EKDSLMEISFHIP----------NSNTQFVGDENHPPAQVFRDKIMSMADVGAGGEEAVV 93
KD L+E+ F+IP ++ + +E +F D +M A++G + +
Sbjct: 177 GKDQLVEMRFYIPGTAKKEADGDDAGSDAGAEEEKNAVTLFYDTLMEKAEIGETAGDTIA 236
Query: 94 TFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLD 153
TF I LTPRGR+ ++++ + RL+G+ D+KIQY ++ + +LPK ++ H + V LD
Sbjct: 237 TFLDILHLTPRGRFDIDMYDASFRLRGKTYDYKIQYDAIKKFMVLPKPDETHVLLCVGLD 296
Query: 154 PPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRG 213
PP+R+GQT YP IV+QF+ + V +L ++EE ++ +YKD+L+P Y+ +H+V T I RG
Sbjct: 297 PPLRQGQTRYPFIVMQFKKEEEVTIDLNLTEEQIDERYKDRLQPHYEQPLHQVITYIFRG 356
Query: 214 LSGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEF 272
L+ KIT P K F++ ++ + +K S+KA +G LY LEK+F F+PKP T I +E+ + F
Sbjct: 357 LANKKITTPAKDFQTHRNQFGIKCSIKASEGFLYCLEKAFMFVPKPATYIAYEQTASITF 416
Query: 273 ERHAAGGSNMHYFDLLIRLKT-EQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTD 331
R S + FD+ +++K F NI R + L +F KGL++ N D + ++
Sbjct: 417 SRVGGAVSALSTFDITVQMKNGAGSSQFSNINREDLKGLEEFFRLKGLRVKNEID-EESN 475
Query: 332 GVAAVLQEDDDDAVDPHLERIKNEAGGD 359
+AA L+E A+D E + A D
Sbjct: 476 LIAAALRE---QAMDDSEEEVVGAAKAD 500
>gi|169596308|ref|XP_001791578.1| hypothetical protein SNOG_00911 [Phaeosphaeria nodorum SN15]
gi|160701278|gb|EAT92406.2| hypothetical protein SNOG_00911 [Phaeosphaeria nodorum SN15]
Length = 573
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 158/450 (35%), Positives = 230/450 (51%), Gaps = 52/450 (11%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHV--DDTTGAN---------------E 44
LTF V + AFEV +VS T L GKN+V ++F + D GAN
Sbjct: 123 LTFNVANRPAFEVPYTEVSNTNLAGKNEVAVDFSLPADGDAGANGHLGGAKFRGKKSAGA 182
Query: 45 KDSLMEISFHIPNSNTQFVGDEN--------------HPPAQVFRDKIMSMADVGAGGEE 90
+D L+E+ F+IP T+ +E+ A +F + +M A++G +
Sbjct: 183 RDQLVEMRFYIPGVTTKKEKNEDGEDVSGAEDGDGEEQNAANLFYETLMDKAEIGEVAGD 242
Query: 91 AVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVV 150
TF I LTPRGR+ ++++ S RL+G+ D+KIQ+ SV + +LPK + HT + +
Sbjct: 243 TFATFLDILHLTPRGRFDIDMYESSFRLRGKTYDYKIQFDSVKKFMVLPKPDDMHTLITI 302
Query: 151 TLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTI 210
LDPP+R+GQT YP +V+QF+ D V +L M E+LL +KYKDKL+ Y+ I V I
Sbjct: 303 GLDPPLRQGQTRYPFLVMQFKRDEEVNLDLNMKEDLLESKYKDKLQSHYEAPIAVVVADI 362
Query: 211 LRGLSGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDY 269
RGLSG ++T+P + F S + VK S+KA +G L+ L+K+F F+PKP T I + I
Sbjct: 363 FRGLSGKRVTRPSRDFISHHEQSGVKCSIKANEGHLFCLDKAFMFIPKPATYISMDNIAS 422
Query: 270 VEFERHAAGGSNMHYFDLLIRLKTEQ-EHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMK 328
V R + FD+ +K EH F NI R E L +F KG+K N +M
Sbjct: 423 VTMSRVGGAMAASRTFDITFTMKGGMAEHQFSNINREEQQPLENFFRAKGIKTKN--EMA 480
Query: 329 TTDG--VAAVLQEDDDDAVDPHLERIKNEAG-----------GDESDEEDSDFVADKDDG 375
G +AA LQ++D + D + A D E +F +D
Sbjct: 481 DDSGAILAAALQDEDLASSDDGAPANRGSADEDDESVDEDFQADSESEVGEEFDSDHQSS 540
Query: 376 GSPTD---DSGEEDSDASESGGEKEKPAKK 402
GS +D G DSDA+E+ E+P KK
Sbjct: 541 GSDSDAEMGEGGADSDAAEA-AVPERPKKK 569
>gi|258576315|ref|XP_002542339.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237902605|gb|EEP77006.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 569
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 156/446 (34%), Positives = 233/446 (52%), Gaps = 52/446 (11%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHV---------DDTTGANE-------- 44
L+F V + AFE+ +++S T L G+N+V +EF + + G+N+
Sbjct: 126 LSFNVQNRPAFEIPYSEISNTNLAGRNEVAVEFSLPADGTPNGPNGQPGSNKNRGKKAGA 185
Query: 45 -KDSLMEISFHIPNSNT---QFVGDEN---------HPPAQVFRDKIMSMADVGAGGEEA 91
KD L+E+ F+IP + Q DE A +F + +M A++G +
Sbjct: 186 GKDELVEMRFYIPGTAVKKDQADADEKSVDGEEIEEQNAANLFYETLMDKAEIGEVAGDT 245
Query: 92 VVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVT 151
TF I LTPRGR+ ++++ + LRL+G+ D+KIQY S+ + FLLPK++ HT + V
Sbjct: 246 FATFPDILHLTPRGRFDIDMYENSLRLRGKTYDYKIQYQSIKKFFLLPKNDDTHTLITVG 305
Query: 152 LDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTIL 211
LDPP+R+GQT YP +V+Q + D +L M++ELL T+YKDKL+ Y+ IH V T +
Sbjct: 306 LDPPLRQGQTRYPFLVMQLKLDDEYNLDLNMTDELLQTRYKDKLQAHYEEPIHLVMTKVF 365
Query: 212 RGLSGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYV 270
RGLSG KI P F S + +K S+KA +G+LY L+KSF F+PKP T + + I +
Sbjct: 366 RGLSGKKIIMPSNDFTSNHNHNGIKCSIKANEGLLYCLDKSFMFVPKPATYVQIDNISVI 425
Query: 271 EFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTT 330
R S FD+ + LK EH F NI R E L F K ++ N T+
Sbjct: 426 TMSRVGGAVSASRTFDITMSLKGGGEHQFSNINREEQKPLEAFFKAKNIRFKNEMAEDTS 485
Query: 331 DGVAAVLQEDDDDAVDPHLERIKNEAGGD---ESDEEDSDFVADKDDGGSPTDDSGEEDS 387
+AA L D+D+ ++ E + G + + D DF A+ S +D + E DS
Sbjct: 486 TLLAAAL--DNDELMESSDEEVSGAHRGSADEDEESVDEDFQAE-----SESDVAEEYDS 538
Query: 388 DASESGG-----------EKEKPAKK 402
+ SG EKE+P KK
Sbjct: 539 EHESSGSDATMDDADDDEEKERPKKK 564
>gi|24762396|ref|NP_523830.2| structure specific recognition protein [Drosophila melanogaster]
gi|12644386|sp|Q05344.2|SSRP1_DROME RecName: Full=FACT complex subunit Ssrp1; AltName:
Full=Chorion-factor 5; AltName: Full=Facilitates
chromatin transcription complex subunit Ssrp1; AltName:
Full=Recombination signal sequence recognition protein;
AltName: Full=Single-strand recognition protein;
AltName: Full=dSSRP1
gi|296434|emb|CAA48471.1| SSRP1 [Drosophila melanogaster]
gi|7291642|gb|AAF47064.1| structure specific recognition protein [Drosophila melanogaster]
gi|201065989|gb|ACH92404.1| FI07619p [Drosophila melanogaster]
Length = 723
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 140/353 (39%), Positives = 193/353 (54%), Gaps = 13/353 (3%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F K FEV L+ VSQ + GKN+V LEFH +D L+E+ FHIP
Sbjct: 118 VLSFDKESKTIFEVPLSHVSQC-VTGKNEVTLEFHQNDDAPVG----LLEMRFHIPA--- 169
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P F +MS A V + E++ F I ILTPRGRY +++ +F +L G
Sbjct: 170 --VESAEEDPVDKFHQNVMSKASVISASGESIAIFREIQILTPRGRYDIKIFSTFFQLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI SV+RLF+LP + F V++LDPPI++GQT Y ++VL F D EL
Sbjct: 228 KTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLDPPIKQGQTRYHYLVLLFAPDEETTIEL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
SE L KY+ KLE G ++EV +++ L G KIT PG F AV S KA
Sbjct: 288 PFSEAELRDKYEGKLEKEISGPVYEVMGKVMKVLIGRKITGPGNFIGHSGTAAVGCSFKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLE+ F ++ KPP I EEI V F R +GGS FD + LK H+F
Sbjct: 348 AAGYLYPLERGFIYIHKPPLHIRFEEISSVNFAR--SGGST-RSFDFEVTLKNGTVHIFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIK 353
+I++ EY LFD+I+ K L + N+G K+ D+++ D +L R+K
Sbjct: 405 SIEKEEYAKLFDYITQKKLHVSNMGKDKSGYKDVDFGDSDNENEPDAYLARLK 457
>gi|190344865|gb|EDK36631.2| hypothetical protein PGUG_00729 [Meyerozyma guilliermondii ATCC
6260]
Length = 546
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 148/421 (35%), Positives = 227/421 (53%), Gaps = 37/421 (8%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIP----N 57
L F V K AFE+ AD+S L GKN+V +E ++D +E L+E+ F+IP N
Sbjct: 148 LVFQVNNKPAFELPYADISNANLTGKNEVAVEMNLDSGKAGDE---LVEMRFYIPGMVEN 204
Query: 58 SNTQFVGDE------NHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVEL 111
+ DE A VF +++ A++G EA+V+F + LTPRGRY +++
Sbjct: 205 EEKKDEKDEAETAVSTETQASVFYEQLKDRANIGQVAGEAIVSFSDVLFLTPRGRYDIDM 264
Query: 112 HLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFE 171
+ LRL+G+ D+KIQY + R+F LPK + H +V+ +DPP+R+GQT YP +V+QF
Sbjct: 265 YPGSLRLRGKTYDYKIQYKQIERIFSLPKPDDTHQLMVLQIDPPLRQGQTRYPFLVMQFA 324
Query: 172 TDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRS--AQ 229
+ ++ EL +S+E KYK++L+ SY + V + +GLS ++ PG F+S AQ
Sbjct: 325 KEEEIEVELNVSDEDYE-KYKERLKRSYDAQTYLVMSHCFKGLSERRVIVPGSFQSRFAQ 383
Query: 230 DGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLI 289
G V SLKA +G LYPLE+ F F+ KP I E+ V R GG FDL +
Sbjct: 384 PG--VSCSLKASEGYLYPLERCFLFVTKPTIYIPFSEVSSVSMSRTGTGGVTSRTFDLEV 441
Query: 290 RLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHL 349
LK H+F NI++ E + ++ + KGLK+ N + +A + E D+D
Sbjct: 442 TLKGSGSHVFANIEKEEQETIENYCTSKGLKVQNEEKIAKA-MIAKAINEADEDV----- 495
Query: 350 ERIKNEAGGDESDEEDSDFVADKDDGGSPTDDSGEEDSD---ASESGGEKEKPAKKESKK 406
+ G +S+ ED DF D S +D + E DS+ + + ++P KK+ K+
Sbjct: 496 -----DMGSADSESEDGDF-----DAQSESDVAEEFDSEASASDSGADDDDEPPKKKVKE 545
Query: 407 E 407
E
Sbjct: 546 E 546
>gi|28557563|gb|AAO45187.1| SD06504p [Drosophila melanogaster]
Length = 723
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 140/353 (39%), Positives = 193/353 (54%), Gaps = 13/353 (3%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F K FEV L+ VSQ + GKN+V LEFH +D L+E+ FHIP
Sbjct: 118 VLSFDKESKTIFEVPLSHVSQC-VTGKNEVTLEFHQNDDAPVG----LLEMRFHIPA--- 169
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P F +MS A V + E++ F I ILTPRGRY +++ +F +L G
Sbjct: 170 --VESAEEDPVDKFHQNVMSKASVISASGESIAIFREIQILTPRGRYDIKIFSTFFQLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI SV+RLF+LP + F V++LDPPI++GQT Y ++VL F D EL
Sbjct: 228 KTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLDPPIKQGQTRYHYLVLLFAPDEETTIEL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
SE L KY+ KLE G ++EV +++ L G KIT PG F AV S KA
Sbjct: 288 PFSEAELRDKYEGKLEKEISGPVYEVMGKVMKVLIGRKITGPGNFIGHSGTAAVGCSFKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLE+ F ++ KPP I EEI V F R +GGS FD + LK H+F
Sbjct: 348 AAGYLYPLERGFIYIHKPPLHIRFEEISSVNFAR--SGGST-RSFDFEVTLKNGTVHIFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIK 353
+I++ EY LFD+I+ K L + N+G K+ D+++ D +L R+K
Sbjct: 405 SIEKEEYAKLFDYITQKKLHVSNMGKDKSGYKDVDFGDSDNENEPDAYLARLK 457
>gi|68466813|ref|XP_722602.1| hypothetical protein CaO19.1560 [Candida albicans SC5314]
gi|68467092|ref|XP_722461.1| hypothetical protein CaO19.9133 [Candida albicans SC5314]
gi|74587618|sp|Q5ALL8.1|POB3_CANAL RecName: Full=FACT complex subunit POB3; AltName: Full=Facilitates
chromatin transcription complex subunit POB3
gi|46444439|gb|EAL03714.1| hypothetical protein CaO19.9133 [Candida albicans SC5314]
gi|46444589|gb|EAL03863.1| hypothetical protein CaO19.1560 [Candida albicans SC5314]
Length = 538
Score = 234 bits (598), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 150/427 (35%), Positives = 232/427 (54%), Gaps = 32/427 (7%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNS--- 58
L F V K AFE+ +D+S + L GKN+V LEF++D+ +E ++E+ F++P +
Sbjct: 120 LIFNVNNKPAFEIPYSDISNSNLTGKNEVALEFNLDNNKNGDE---IVEMRFYVPGTIEN 176
Query: 59 NTQFVGDENH------------PPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGR 106
T V +E + AQ F +++ AD+G EA+V+F + LTPRGR
Sbjct: 177 ETTIVKNETNGDVIEEAVVNETSAAQQFYEQLKDKADIGQVAGEAIVSFSDVLFLTPRGR 236
Query: 107 YSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHI 166
Y ++++ S LRL+G+ D+KIQY + R+F LPK ++ H +V+ +DPP+R+GQT YP +
Sbjct: 237 YDIDMYPSSLRLRGKTYDYKIQYEQIERIFSLPKPDETHHLIVLQIDPPLRQGQTRYPFL 296
Query: 167 VLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFR 226
VLQF D + EL +S+E KYKD+L+ +Y + V + LRGL+ K+ PG F+
Sbjct: 297 VLQFVKDEETELELNVSDEDFEKKYKDRLKKTYDAPTNVVMSHCLRGLTERKLITPGAFQ 356
Query: 227 SAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFD 286
S V S+KA +G L+PL++ F F+ KP I + EI V R G S FD
Sbjct: 357 SRYLQAGVPCSVKASEGYLFPLDRCFLFVTKPTLYIPYSEISSVVMSRTGGGVSASRTFD 416
Query: 287 LLIR-LKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAV 345
L + + + Q H+F NI R E + F KG+K+ N + A+ QE +DD
Sbjct: 417 LEVNVIGSNQPHVFSNIDREEQEFIESFCKEKGVKVKNEEKIAKARLAKALEQEANDDD- 475
Query: 346 DPHLERIKNEAGGDESDE-------EDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEK 398
+ AG ++ DE DSD + D +P+ D EE +D+ E+ ++
Sbjct: 476 --DEDADMGSAGDEDEDEDVDFQSGSDSDVAEEFDSDAAPSSDDDEEMADSKET---DDR 530
Query: 399 PAKKESK 405
P KK++K
Sbjct: 531 PPKKKAK 537
>gi|367050952|ref|XP_003655855.1| FACT complex subunit POB-3-like protein [Thielavia terrestris NRRL
8126]
gi|347003119|gb|AEO69519.1| FACT complex subunit POB-3-like protein [Thielavia terrestris NRRL
8126]
Length = 570
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 132/383 (34%), Positives = 214/383 (55%), Gaps = 28/383 (7%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDD---TTGANE------------KD 46
L+F V + AFE+ +++S T L G+N++ +EF V + +G N +D
Sbjct: 117 LSFNVQNRPAFEIPYSEISNTNLAGRNEIAIEFAVGEGGRASGQNGAGPGKGKKASAGRD 176
Query: 47 SLMEISFHIPNSNTQF----------VGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFE 96
L+E+ F+IP + T+ +E +F D ++ A++G +A+ TF
Sbjct: 177 QLVEMRFYIPGTTTRKEAEGGEAGSDADEEEKNAVTLFYDTLIEKAEIGETAGDAIATFL 236
Query: 97 GIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPI 156
+ LTPRGR+ ++++ + RL+G+ D+KIQY ++ + +LPK + H + + LDPP+
Sbjct: 237 DVLHLTPRGRFDIDMYDASFRLRGKTYDYKIQYEAIKKFMVLPKPDDLHFMLCIGLDPPL 296
Query: 157 RKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSG 216
R+GQT YP IV+QF+ D V +L +S+E LN KYKD+L+ Y+ +H+V I +GL+
Sbjct: 297 RQGQTRYPFIVMQFKQDEEVTLDLNLSDEELNGKYKDRLQAHYEQPLHQVVAFIFKGLAN 356
Query: 217 AKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERH 275
KIT P K F + + Y +K S+KA +G LY LEK+F F+PKP T I +E+ + F R
Sbjct: 357 KKITAPAKDFTTHRQQYGIKCSIKASEGFLYLLEKAFMFVPKPATYISYEQTQSITFSRV 416
Query: 276 AAGGSNMHYFDLLIRLKT-EQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVA 334
+ + FD+ + +K+ F NI R E L DF KGL++ N D + + A
Sbjct: 417 GGAVTALQTFDITVHMKSGAGSSQFSNINREELKALEDFFKLKGLRVKNEID-EDSKLAA 475
Query: 335 AVLQEDDDDAVDPHLERIKNEAG 357
A L++DD + D + K + G
Sbjct: 476 AALRDDDMASSDEEVVGAKADRG 498
>gi|238882037|gb|EEQ45675.1| hypothetical protein CAWG_04006 [Candida albicans WO-1]
Length = 538
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 150/427 (35%), Positives = 232/427 (54%), Gaps = 32/427 (7%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNS--- 58
L F V K AFE+ +D+S + L GKN+V LEF++D+ +E ++E+ F++P +
Sbjct: 120 LIFNVNNKPAFEIPYSDISNSNLTGKNEVALEFNLDNNKNGDE---IVEMRFYVPGTIEN 176
Query: 59 NTQFVGDENH------------PPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGR 106
T V +E + AQ F +++ AD+G EA+V+F + LTPRGR
Sbjct: 177 ETTIVKNETNGDVVEEAIVNETSAAQQFYEQLKDKADIGQVAGEAIVSFSDVLFLTPRGR 236
Query: 107 YSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHI 166
Y ++++ S LRL+G+ D+KIQY + R+F LPK ++ H +V+ +DPP+R+GQT YP +
Sbjct: 237 YDIDMYPSSLRLRGKTYDYKIQYEQIERIFSLPKPDETHHLIVLQIDPPLRQGQTRYPFL 296
Query: 167 VLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFR 226
VLQF D + EL +S+E KYKD+L+ +Y + V + LRGL+ K+ PG F+
Sbjct: 297 VLQFVKDEETELELNVSDEDFEKKYKDRLKKTYDAPTNVVMSHCLRGLTERKLITPGAFQ 356
Query: 227 SAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFD 286
S V S+KA +G L+PL++ F F+ KP I + EI V R G S FD
Sbjct: 357 SRYLQAGVPCSVKASEGYLFPLDRCFLFVTKPTLYIPYSEISSVVMSRTGGGVSASRTFD 416
Query: 287 LLIR-LKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAV 345
L + + + Q H+F NI R E + F KG+K+ N + A+ QE +DD
Sbjct: 417 LEVNVIGSNQPHVFSNIDREEQEFIESFCKEKGVKVKNEEKIAKARLAKALEQEANDDD- 475
Query: 346 DPHLERIKNEAGGDESDE-------EDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEK 398
+ AG ++ DE DSD + D +P+ D EE +D+ E+ ++
Sbjct: 476 --DEDADMGSAGDEDEDEDVDFQSGSDSDVAEEFDSDAAPSSDDDEEMADSKET---DDR 530
Query: 399 PAKKESK 405
P KK++K
Sbjct: 531 PPKKKAK 537
>gi|225677920|gb|EEH16204.1| FACT complex subunit pob3 [Paracoccidioides brasiliensis Pb03]
Length = 611
Score = 234 bits (597), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 136/377 (36%), Positives = 204/377 (54%), Gaps = 37/377 (9%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFH-----VDDTTGANE------------ 44
LTF V + AFE+ +++S T L GKN+V +EF V+ T G +E
Sbjct: 154 LTFNVQNRPAFELPYSEISNTNLAGKNEVAVEFALPVDAVNGTNGQSEGSTKNRGRKAGA 213
Query: 45 -KDSLMEISFHIPNS-----------------NTQFVGDENHPPAQVFRDKIMSMADVGA 86
+D L+E+ F+IP + + Q E A +F + +M A++G
Sbjct: 214 GRDELVEMRFYIPGTALKKEKPEGEEGEGDEKSVQGEEAEEQNAANLFYETLMDKAEIGD 273
Query: 87 GGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHT 146
+ TF + LTPRGR+ ++++ S RL+G+ D+KIQY S+ + FLLPK++ HT
Sbjct: 274 VAGDTFATFLDVLHLTPRGRFDIDMYESSFRLRGKTYDYKIQYQSIKKFFLLPKNDDTHT 333
Query: 147 FVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEV 206
+ + LDPP+R+GQT YP +V+Q + D + +L M++ELL T+YKDKLE Y+ IH+V
Sbjct: 334 LITLGLDPPLRQGQTRYPFLVMQLKLDDEISIDLNMTDELLQTRYKDKLEAHYEEPIHQV 393
Query: 207 FTTILRGLSGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHE 265
T + RGLSG K+ P + F S VK S+KA +G+L+ L+KSF F+PKP T + E
Sbjct: 394 VTKVFRGLSGKKVVMPSRDFVSHHGHSGVKCSIKANEGLLFCLDKSFMFVPKPATYVQIE 453
Query: 266 EIDYVEFERHAAGGSNMHYFDLLIRLKTEQ-EHLFRNIQRNEYHNLFDFISGKGLKIMNL 324
I + R S FD+ + LK EH F NI R E L +F K ++ N
Sbjct: 454 NISVITMSRVGGAISASRTFDITMTLKGGMGEHQFSNINREEQQPLEEFFKAKNIRFKNE 513
Query: 325 GDMKTTDGVAAVLQEDD 341
++ +AA L +D
Sbjct: 514 MADDSSALIAAALDNED 530
>gi|451852199|gb|EMD65494.1| hypothetical protein COCSADRAFT_35534 [Cochliobolus sativus ND90Pr]
Length = 561
Score = 234 bits (597), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 157/452 (34%), Positives = 233/452 (51%), Gaps = 51/452 (11%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHV--DDTTGAN---------------E 44
LTF V + AFEV +VS T L GKN+V ++F + D +GAN
Sbjct: 113 LTFNVANRPAFEVPYTEVSNTNLAGKNEVAVDFSLPADSDSGANGQLGGARFRGKKSAGA 172
Query: 45 KDSLMEISFHIP-------------NSNTQFVGDENHPPAQVFRDKIMSMADVGAGGEEA 91
+D L+E+ F+IP +++ G+E + A +F + +M A++G +
Sbjct: 173 RDQLVEMRFYIPGLASKKEKTEDGEDASGAEDGEETNA-ANLFYETLMEKAEIGEVAGDT 231
Query: 92 VVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVT 151
TF I LTPRGR+ ++++ S RL+G+ D+KIQ+ SV + +LPK + HT + +
Sbjct: 232 FATFLDILHLTPRGRFDIDMYESSFRLRGKTYDYKIQFDSVKKFMVLPKPDDMHTLITIG 291
Query: 152 LDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTIL 211
LDPP+R+GQT YP +V+QF+ D V +L M +LL KYKDKL+ Y+ I V I
Sbjct: 292 LDPPLRQGQTRYPFLVMQFKRDEEVNLDLNMKGDLLEDKYKDKLQSHYEAPIATVVADIF 351
Query: 212 RGLSGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYV 270
RGLSG +IT+P + F S + VK S+KA +G L+ L+K+F F+PKP T I + I V
Sbjct: 352 RGLSGKRITRPSRDFISHHEQSGVKCSIKANEGHLFCLDKAFMFIPKPATYISMDNIQSV 411
Query: 271 EFERHAAGGSNMHYFDLLIRLKTEQ-EHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKT 329
R + FD+ +K EH F NI R E L +F KG+K N +M
Sbjct: 412 TMSRVGGAMAASRTFDITFTMKNGMAEHQFSNINREEQQPLENFFRAKGIKTKN--EMAD 469
Query: 330 TDG--VAAVLQEDDDDAVDPHLERIKNEAG-----------GDESDEEDSDFVADKDDGG 376
G +AA LQ++D + D + A D E +F +D G
Sbjct: 470 DSGAILAAALQDEDLASSDDGAPANRGSADEDDESVDEDFQADSESEVGEEFDSDHQSSG 529
Query: 377 SPTD---DSGEEDSDASESGGEKEKPAKKESK 405
S +D D E + DA+E+ E+ K +K S+
Sbjct: 530 SDSDAEMDDAESEGDAAEAVPERPKKKQKVSQ 561
>gi|281212084|gb|EFA86245.1| structure-specific recognition protein 1 [Polysphondylium pallidum
PN500]
Length = 518
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 134/348 (38%), Positives = 206/348 (59%), Gaps = 24/348 (6%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQG--KNDVILEFHVDDTTGANEKDSLMEISFHIPNS 58
M++F + +K AFE ++DVSQ+ + KN++ +EF + D+T +S++E+ F P
Sbjct: 131 MVSFQIDKKTAFEFPISDVSQSIINANNKNELTIEF-LHDSTLDEVDESIVELRFFAPTR 189
Query: 59 NTQFVGDENHP---PAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSF 115
T+ GDE+ P Q F+D ++ +D+ G+ ++V I LTPRGR+ +E++ +F
Sbjct: 190 QTK-EGDEHEETDDPIQDFQDTLLRKSDISNVGK-SIVVLNDIHFLTPRGRFDIEMYPTF 247
Query: 116 LRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYV 175
LRL G+ +D+K+ Y ++ +LF LP+ +Q H F V++LDPP+R+G+T Y H+V+Q D
Sbjct: 248 LRLHGKTHDYKVSYDTISKLFQLPRQDQSHMFFVISLDPPVRQGKTKYNHLVIQLSKDTQ 307
Query: 176 VQSE------LLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQ 229
+ E L +S E KYK+KL P+ +G ++ + IL L+ KI PG F+S
Sbjct: 308 LSKENNNVLHLNLSPE-AEEKYKEKLSPTMEGTLYVIVRRILTSLTENKIIVPGNFQSCN 366
Query: 230 DGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAG-----GSNMHY 284
++K SLKA +G LYPL++SFFF+ KPPTLI + +I VEF R SN
Sbjct: 367 QSNSIKCSLKANEGYLYPLDRSFFFIHKPPTLIKYTDIQIVEFSRAPVAFGSRNTSNSRT 426
Query: 285 FDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKI----MNLGDMK 328
FDL I LK F NI + EY LF+FI K +KI N+ +M+
Sbjct: 427 FDLNITLKDSTTIQFTNILKEEYSLLFNFIQNKQIKIATPEQNVSNMR 474
>gi|317139346|ref|XP_003189156.1| FACT complex subunit pob3 [Aspergillus oryzae RIB40]
Length = 585
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 135/358 (37%), Positives = 195/358 (54%), Gaps = 36/358 (10%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVD-DTTGANEK--------------- 45
L+F V + AFEV +++S T L GKN+V +E ++ D AN +
Sbjct: 123 LSFNVQNRPAFEVPYSEISNTNLAGKNEVAVELALNTDGADANAQPAGSTKNRGRKAASG 182
Query: 46 -DSLMEISFHIPNS-----------------NTQFVGDENHPPAQVFRDKIMSMADVGAG 87
D L+E+ F+IP + + E A +F + +M A++G
Sbjct: 183 PDELVEMRFYIPGTVMKTEKGIKEENGKEENGEEEEEGEEQNAANLFYEMLMEKAEIGDV 242
Query: 88 GEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTF 147
+ TF + LTPRGR+ ++++ S RL+G+ D+KIQYSS+ + FLLPK++ HT
Sbjct: 243 AGDTFATFLDVLHLTPRGRFDIDMYESSFRLRGKTYDYKIQYSSIKKFFLLPKNDDTHTL 302
Query: 148 VVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVF 207
+V+ LDPP+R+GQT YP +V+Q + D + EL M++EL+ T+YKDKLEP Y+ IH+V
Sbjct: 303 IVLGLDPPLRQGQTRYPFLVMQLKLDEEISLELNMTDELMETRYKDKLEPRYEEPIHQVV 362
Query: 208 TTILRGLSGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEE 266
T I RGLSG K+ P K F S VK S+KA +G+LY L+KS F+PKP T I E
Sbjct: 363 TKIFRGLSGKKVIMPSKDFVSHHGHSGVKCSIKANEGLLYFLDKSLIFVPKPATYIQVEN 422
Query: 267 IDYVEFERHAAGGSNMHYFDLLIRLKTEQ-EHLFRNIQRNEYHNLFDFISGKGLKIMN 323
I + R S FD+ + LK EH F NI R E L +F K ++ N
Sbjct: 423 IAIITMSRVGGAVSASRTFDITVSLKAGMGEHQFSNINREEQQPLEEFFKAKNIRFKN 480
>gi|19113107|ref|NP_596315.1| FACT complex component Pob3 [Schizosaccharomyces pombe 972h-]
gi|74582917|sp|O94529.1|POB3_SCHPO RecName: Full=FACT complex subunit pob3; AltName: Full=Facilitates
chromatin transcription complex subunit pob3
gi|4160575|emb|CAA22834.1| FACT complex component Pob3 [Schizosaccharomyces pombe]
Length = 512
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 140/397 (35%), Positives = 220/397 (55%), Gaps = 9/397 (2%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDD--TTGANEKDSLMEISFHIPNSN 59
L F V + AFE+ ++ V+ T L GKN+V LEF D + + D L+E+ ++P +
Sbjct: 118 LVFDVNSRPAFEIPISAVTNTNLSGKNEVALEFSTTDDKQIPSAQVDELVEMRLYVPGTT 177
Query: 60 TQ---FVGDE-NHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSF 115
+ G+E A +F + + AD+G +A+V+F I +LTPRGRY ++++ +
Sbjct: 178 AKEDAADGEEVEQNAANLFYESLKERADIGQAAGDAIVSFSEILLLTPRGRYDIDMYETC 237
Query: 116 LRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYV 175
+RL+G+ D+K++YSS+ LFLLPK ++ H V+ L+PP+R+GQT YP +V QF D
Sbjct: 238 MRLRGKTYDYKVEYSSINSLFLLPKPDEQHVVFVIGLEPPLRQGQTRYPFLVTQFVRDED 297
Query: 176 VQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVK 235
++ +L + E +L KY DK++ SY EV + I RGL+G K+T P +F S + AVK
Sbjct: 298 MEVDLNIEETVLKEKYADKVKASYDQPAFEVVSQIFRGLTGRKVTTPAEFLSHEGHAAVK 357
Query: 236 SSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQ 295
S KA +G LY L+KSF F+PKP L+ +I V R S FDL L++
Sbjct: 358 CSYKANEGQLYCLDKSFLFIPKPTLLMNTSDITRVTLSRVGMSVSAARTFDLTFTLRSGT 417
Query: 296 EHLFRNIQRNEYHNLFDFISGKGLKIMN-LGDMKTTDGVAAVLQEDDDDAVDPHLERIKN 354
+ F NI R E L F+ K +KI N L D + + L ++D++ + E +
Sbjct: 418 SYQFSNINRVEQSALVAFLESKQIKIHNDLADETQQTLLTSALDDEDEEGDEEMEEALSE 477
Query: 355 EAGGDESDEEDSDFVADKDDGGSPTDDSGEEDSDASE 391
+ D E +SD + D+ +D+ G ++ SE
Sbjct: 478 DE--DFQAESESDVAEEYDENAESSDEEGASGAEGSE 512
>gi|169765954|ref|XP_001817448.1| FACT complex subunit pob3 [Aspergillus oryzae RIB40]
gi|110287790|sp|Q2USL9.1|POB3_ASPOR RecName: Full=FACT complex subunit pob3; AltName: Full=Facilitates
chromatin transcription complex subunit pob3
gi|83765303|dbj|BAE55446.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 576
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 135/358 (37%), Positives = 195/358 (54%), Gaps = 36/358 (10%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVD-DTTGANEK--------------- 45
L+F V + AFEV +++S T L GKN+V +E ++ D AN +
Sbjct: 114 LSFNVQNRPAFEVPYSEISNTNLAGKNEVAVELALNTDGADANAQPAGSTKNRGRKAASG 173
Query: 46 -DSLMEISFHIPNS-----------------NTQFVGDENHPPAQVFRDKIMSMADVGAG 87
D L+E+ F+IP + + E A +F + +M A++G
Sbjct: 174 PDELVEMRFYIPGTVMKTEKGIKEENGKEENGEEEEEGEEQNAANLFYEMLMEKAEIGDV 233
Query: 88 GEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTF 147
+ TF + LTPRGR+ ++++ S RL+G+ D+KIQYSS+ + FLLPK++ HT
Sbjct: 234 AGDTFATFLDVLHLTPRGRFDIDMYESSFRLRGKTYDYKIQYSSIKKFFLLPKNDDTHTL 293
Query: 148 VVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVF 207
+V+ LDPP+R+GQT YP +V+Q + D + EL M++EL+ T+YKDKLEP Y+ IH+V
Sbjct: 294 IVLGLDPPLRQGQTRYPFLVMQLKLDEEISLELNMTDELMETRYKDKLEPRYEEPIHQVV 353
Query: 208 TTILRGLSGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEE 266
T I RGLSG K+ P K F S VK S+KA +G+LY L+KS F+PKP T I E
Sbjct: 354 TKIFRGLSGKKVIMPSKDFVSHHGHSGVKCSIKANEGLLYFLDKSLIFVPKPATYIQVEN 413
Query: 267 IDYVEFERHAAGGSNMHYFDLLIRLKTEQ-EHLFRNIQRNEYHNLFDFISGKGLKIMN 323
I + R S FD+ + LK EH F NI R E L +F K ++ N
Sbjct: 414 IAIITMSRVGGAVSASRTFDITVSLKAGMGEHQFSNINREEQQPLEEFFKAKNIRFKN 471
>gi|391868349|gb|EIT77567.1| nucleosome-binding factor SPN, POB3 subunit [Aspergillus oryzae
3.042]
Length = 574
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 135/358 (37%), Positives = 195/358 (54%), Gaps = 36/358 (10%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVD-DTTGANEK--------------- 45
L+F V + AFEV +++S T L GKN+V +E ++ D AN +
Sbjct: 114 LSFNVQNRPAFEVPYSEISNTNLAGKNEVAVELALNTDGADANAQPAGSTKNRGRKAASG 173
Query: 46 -DSLMEISFHIPNS-----------------NTQFVGDENHPPAQVFRDKIMSMADVGAG 87
D L+E+ F+IP + + E A +F + +M A++G
Sbjct: 174 PDELVEMRFYIPGTVMKTEKGIKEENGEEENGEEEEEGEEQNAANLFYEMLMEKAEIGDV 233
Query: 88 GEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTF 147
+ TF + LTPRGR+ ++++ S RL+G+ D+KIQYSS+ + FLLPK++ HT
Sbjct: 234 AGDTFATFLDVLHLTPRGRFDIDMYESSFRLRGKTYDYKIQYSSIKKFFLLPKNDDTHTL 293
Query: 148 VVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVF 207
+V+ LDPP+R+GQT YP +V+Q + D + EL M++EL+ T+YKDKLEP Y+ IH+V
Sbjct: 294 IVLGLDPPLRQGQTRYPFLVMQLKLDEEISLELNMTDELMETRYKDKLEPRYEEPIHQVV 353
Query: 208 TTILRGLSGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEE 266
T I RGLSG K+ P K F S VK S+KA +G+LY L+KS F+PKP T I E
Sbjct: 354 TKIFRGLSGKKVIMPSKDFVSHHGHSGVKCSIKANEGLLYFLDKSLIFVPKPATYIQVEN 413
Query: 267 IDYVEFERHAAGGSNMHYFDLLIRLKTEQ-EHLFRNIQRNEYHNLFDFISGKGLKIMN 323
I + R S FD+ + LK EH F NI R E L +F K ++ N
Sbjct: 414 IAIITMSRVGGAVSASRTFDITVSLKAGMGEHQFSNINREEQQPLEEFFKAKNIRFKN 471
>gi|169647773|gb|ACA61888.1| CG4797 [Drosophila melanogaster]
gi|169647835|gb|ACA61919.1| SSRP1 [Drosophila melanogaster]
Length = 493
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 141/353 (39%), Positives = 194/353 (54%), Gaps = 13/353 (3%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F K FEV L+ VSQ + GKN+V LEFH +D L+E+ FHIP
Sbjct: 97 VLSFDKESKTIFEVPLSHVSQC-VTGKNEVTLEFHQNDDAPVG----LLEMRFHIPA--- 148
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P F +MS A V + E++ F I ILTPRGRY +++ +F +L G
Sbjct: 149 --VESAEEDPVDKFHQNVMSKASVISASGESIAIFREIQILTPRGRYDIKIFSTFFQLHG 206
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI SV+RLF+LP + F V++LDPPI++GQT Y ++VL F D EL
Sbjct: 207 KTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLDPPIKQGQTRYHYLVLLFAPDEETTIEL 266
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
SE L KY+ KLE G ++EV +++ L G KIT PG F AV S KA
Sbjct: 267 PFSEAELRDKYEGKLEKEISGPVYEVMGKVMKVLIGRKITGPGNFIGHSGTAAVGCSFKA 326
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLE+ F ++ KPP I EEI V F R +GGS FD + LK H+F
Sbjct: 327 AAGYLYPLERGFIYIHKPPLHIRFEEISSVNFAR--SGGSTRS-FDFEVTLKNGTVHIFS 383
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIK 353
+I++ EY LFD+I+ K L + N+G K+ A D+++ D +L R+K
Sbjct: 384 SIEKEEYAKLFDYITQKKLHVSNMGKDKSGYKDADFGDSDNENEPDAYLARLK 436
>gi|169647775|gb|ACA61889.1| CG4797 [Drosophila melanogaster]
gi|169647837|gb|ACA61920.1| SSRP1 [Drosophila melanogaster]
Length = 493
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 141/353 (39%), Positives = 194/353 (54%), Gaps = 13/353 (3%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F K FEV L+ VSQ + GKN+V LEFH +D T L+E+ FHIP
Sbjct: 97 VLSFDKESKTIFEVPLSHVSQC-VTGKNEVTLEFHQNDDTPVG----LLEMRFHIPA--- 148
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P F +MS A V + E++ F I ILTPRGRY +++ +F +L G
Sbjct: 149 --VESAEEDPVDKFHQNVMSKASVISASGESIAIFREIQILTPRGRYDIKIFSTFFQLHG 206
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI SV+RLF+LP + F V++LDPPI++GQT Y ++VL F D EL
Sbjct: 207 KTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLDPPIKQGQTRYHYLVLLFAPDEETTIEL 266
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
SE L KY+ KLE G ++EV +++ L G KIT PG F AV S KA
Sbjct: 267 PFSEAELRDKYEGKLEKEISGPVYEVMGKVMKVLIGRKITGPGNFIGHSGTAAVGCSFKA 326
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLE+ F ++ KPP I EEI V F R +GGS FD + LK H+F
Sbjct: 327 AAGYLYPLERGFIYIHKPPLHIRFEEISSVNFAR--SGGSTRS-FDFEVTLKNGTVHIFS 383
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIK 353
+I++ EY LFD+I+ K L + N+G K+ D+++ D +L R+K
Sbjct: 384 SIEKEEYAKLFDYITQKKLHVSNMGKDKSGYKDVDFGDSDNENEPDAYLARLK 436
>gi|317029335|ref|XP_001391369.2| FACT complex subunit pob3 [Aspergillus niger CBS 513.88]
Length = 576
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 139/383 (36%), Positives = 202/383 (52%), Gaps = 38/383 (9%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDD----------------TTGANEK 45
L+F V + AFE+ +++S T L GKN+V +EF + A+
Sbjct: 114 LSFNVQNRPAFEIPYSEISNTNLAGKNEVAVEFALGGEGNEPAKPAGSTKNRGRKAASGP 173
Query: 46 DSLMEISFHIPNSNTQ--------------------FVGDENHPPAQVFRDKIMSMADVG 85
D L+E+ F+IP + + E A +F + +M A++G
Sbjct: 174 DELVEMRFYIPGTAVKTEKGIKEENAENADEENGAEEEEGEEQNAANLFYEMLMDKAEIG 233
Query: 86 AGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPH 145
+ TF + LTPRGR+ ++++ S RL+G+ D+KIQY+S+ + FLLPK++ H
Sbjct: 234 DVAGDTFATFLDVLHLTPRGRFDIDMYESSFRLRGKTYDYKIQYASIKKFFLLPKNDDTH 293
Query: 146 TFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHE 205
T +V+ LDPP+R+GQT YP +V+Q + D + EL M++ELL T+YKDKLEP Y+ IH+
Sbjct: 294 TLIVLGLDPPLRQGQTRYPFLVMQLKLDEEISLELNMTDELLETRYKDKLEPRYEEPIHQ 353
Query: 206 VFTTILRGLSGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILH 264
V T I RGLSG K+ P K F S VK S+KA +G+LY L+KS F+PKP T I
Sbjct: 354 VVTKIFRGLSGKKVIMPSKDFVSHHGHSGVKCSIKANEGLLYFLDKSLIFVPKPATYIQI 413
Query: 265 EEIDYVEFERHAAGGSNMHYFDLLIRLKTE-QEHLFRNIQRNEYHNLFDFISGKGLKIMN 323
E I + R S FD+ + LK EH F NI R E L +F K ++ N
Sbjct: 414 ENIAIITMSRVGGAISASRTFDITVSLKAGLGEHQFSNINREEQQPLEEFFKAKNIRFKN 473
Query: 324 LGDMKTTDGVAAVLQEDDDDAVD 346
+ +AA L DD + D
Sbjct: 474 EMSDDASALIAAALDNDDMGSSD 496
>gi|169647789|gb|ACA61896.1| CG4797 [Drosophila melanogaster]
gi|169647851|gb|ACA61927.1| SSRP1 [Drosophila melanogaster]
Length = 493
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 141/356 (39%), Positives = 194/356 (54%), Gaps = 13/356 (3%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F K FEV L+ VSQ + GKN+V LEFH +D L+E+ FHIP
Sbjct: 97 VLSFDKESKTIFEVPLSHVSQC-VTGKNEVTLEFHQNDDAPVG----LLEMRFHIPA--- 148
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P F +MS A V + E++ F I ILTPRGRY +++ +F +L G
Sbjct: 149 --VESAEEDPVDKFHQNVMSKASVISASGESIAIFREIQILTPRGRYDIKIFSTFFQLHG 206
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI SV+RLF+LP + F V++LDPPI++GQT Y ++V F D EL
Sbjct: 207 KTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLDPPIKQGQTRYHYLVXLFAPDEETTIEL 266
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
SE L KY+ KLE G ++EV +++ L G KIT PG F AV S KA
Sbjct: 267 PFSEAELRDKYEGKLEKEISGPVYEVMGKVMKVLIGRKITGPGNFIGHSGTAAVGCSFKA 326
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLE+ F ++ KPP I EEI V F R +GGS FD + LK H+F
Sbjct: 327 AAGYLYPLERGFIYIHKPPLHIRFEEISSVNFAR--SGGST-RSFDFEVTLKNGTVHIFS 383
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEA 356
+I++ EY LFD+I+ K L + N+G K+ D+++ D +L R+K EA
Sbjct: 384 SIEKEEYAKLFDYITQKKLHVSNMGKDKSGYKDVDFGDSDNENEPDAYLARLKAEA 439
>gi|146422835|ref|XP_001487352.1| hypothetical protein PGUG_00729 [Meyerozyma guilliermondii ATCC
6260]
Length = 546
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 148/421 (35%), Positives = 227/421 (53%), Gaps = 37/421 (8%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIP----N 57
L F V K AFE+ AD+S L GKN+V +E ++D +E L+E+ F+IP N
Sbjct: 148 LVFQVNNKPAFELPYADISNANLTGKNEVAVEMNLDSGKAGDE---LVEMRFYIPGMVEN 204
Query: 58 SNTQFVGDE------NHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVEL 111
+ DE A VF +++ A++G EA+V+F + LTPRGRY +++
Sbjct: 205 EEKKDEKDEAETAVSTETQASVFYEQLKDRANIGQVAGEAIVSFSDVLFLTPRGRYDIDM 264
Query: 112 HLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFE 171
+ LRL+G+ D+KIQY + R+F LPK + H +V+ +DPP+R+GQT YP +V+QF
Sbjct: 265 YPGSLRLRGKTYDYKIQYKQIERIFSLPKPDDTHQLMVLQIDPPLRQGQTRYPFLVMQFA 324
Query: 172 TDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRS--AQ 229
+ ++ EL +S+E KYK++L+ SY + V + +GLS ++ PG F+S AQ
Sbjct: 325 KEEEIEVELNVSDEDYE-KYKERLKRSYDAQTYLVMSHCFKGLSERRVIVPGSFQSRFAQ 383
Query: 230 DGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLI 289
G V SLKA +G LYPLE+ F F+ KP I E+ V R GG FDL +
Sbjct: 384 PG--VSCSLKASEGYLYPLERCFLFVTKPTIYIPFSEVLSVSMSRTGTGGVTSRTFDLEV 441
Query: 290 RLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHL 349
LK H+F NI++ E + ++ + KGLK+ N + +A + E D+D
Sbjct: 442 TLKGSGSHVFANIEKEEQETIENYCTLKGLKVQNEEKIAKA-MIAKAINEADEDV----- 495
Query: 350 ERIKNEAGGDESDEEDSDFVADKDDGGSPTDDSGEEDSD---ASESGGEKEKPAKKESKK 406
+ G +S+ ED DF D S +D + E DS+ + + ++P KK+ K+
Sbjct: 496 -----DMGSADSESEDGDF-----DAQSESDVAEEFDSEASASDSGADDDDEPPKKKVKE 545
Query: 407 E 407
E
Sbjct: 546 E 546
>gi|238482569|ref|XP_002372523.1| structure-specific recognition protein, putative [Aspergillus
flavus NRRL3357]
gi|220700573|gb|EED56911.1| structure-specific recognition protein, putative [Aspergillus
flavus NRRL3357]
Length = 634
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 135/358 (37%), Positives = 195/358 (54%), Gaps = 36/358 (10%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVD-DTTGANEK--------------- 45
L+F V + AFEV +++S T L GKN+V +E ++ D AN +
Sbjct: 174 LSFNVQNRPAFEVPYSEISNTNLAGKNEVAVELALNTDGADANAQPAGSTKNRGRKAASG 233
Query: 46 -DSLMEISFHIPNS-----------------NTQFVGDENHPPAQVFRDKIMSMADVGAG 87
D L+E+ F+IP + + E A +F + +M A++G
Sbjct: 234 PDELVEMRFYIPGTVMKTEKGIKEENGEEENGEEEEEGEEQNAANLFYEMLMEKAEIGDV 293
Query: 88 GEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTF 147
+ TF + LTPRGR+ ++++ S RL+G+ D+KIQYSS+ + FLLPK++ HT
Sbjct: 294 AGDTFATFLDVLHLTPRGRFDIDMYESSFRLRGKTYDYKIQYSSIKKFFLLPKNDDTHTL 353
Query: 148 VVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVF 207
+V+ LDPP+R+GQT YP +V+Q + D + EL M++EL+ T+YKDKLEP Y+ IH+V
Sbjct: 354 IVLGLDPPLRQGQTRYPFLVMQLKLDEEISLELNMTDELMETRYKDKLEPRYEEPIHQVV 413
Query: 208 TTILRGLSGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEE 266
T I RGLSG K+ P K F S VK S+KA +G+LY L+KS F+PKP T I E
Sbjct: 414 TKIFRGLSGKKVIMPSKDFVSHHGHSGVKCSIKANEGLLYFLDKSLIFVPKPATYIQVEN 473
Query: 267 IDYVEFERHAAGGSNMHYFDLLIRLKTEQ-EHLFRNIQRNEYHNLFDFISGKGLKIMN 323
I + R S FD+ + LK EH F NI R E L +F K ++ N
Sbjct: 474 IAIITMSRVGGAVSASRTFDITVSLKAGMGEHQFSNINREEQQPLEEFFKAKNIRFKN 531
>gi|169647771|gb|ACA61887.1| CG4797 [Drosophila melanogaster]
gi|169647833|gb|ACA61918.1| SSRP1 [Drosophila melanogaster]
Length = 493
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 140/353 (39%), Positives = 193/353 (54%), Gaps = 13/353 (3%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F K FEV L+ VSQ + GKN+V LEFH +D L+E+ FHIP
Sbjct: 97 VLSFDKESKTIFEVPLSHVSQC-VTGKNEVTLEFHQNDDAPVG----LLEMRFHIPA--- 148
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P F +MS A V + E++ F I ILTPRGRY +++ +F +L G
Sbjct: 149 --VESAEEDPVDKFHQNVMSKASVISASGESIAIFREIQILTPRGRYDIKIFSTFFQLHG 206
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI SV+RLF+LP + F V++LDPPI++GQT Y ++VL F D EL
Sbjct: 207 KTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLDPPIKQGQTRYHYLVLLFAPDEETTIEL 266
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
SE L KY+ KLE G ++EV +++ L G KIT PG F AV S KA
Sbjct: 267 PFSEAELRDKYEGKLEKEISGPVYEVMGKVMKVLIGRKITGPGNFIGHSGTAAVGCSFKA 326
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLE+ F ++ KPP I EEI V F R +GGS FD + LK H+F
Sbjct: 327 AAGYLYPLERGFIYIHKPPLHIRFEEISSVNFAR--SGGST-RSFDFEVTLKNGTVHIFS 383
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIK 353
+I++ EY LFD+I+ K L + N+G K+ D+++ D +L R+K
Sbjct: 384 SIEKEEYAKLFDYITQKKLHVSNMGKDKSGYKDVDFGDSDNENEPDAYLARLK 436
>gi|169647791|gb|ACA61897.1| CG4797 [Drosophila melanogaster]
gi|169647853|gb|ACA61928.1| SSRP1 [Drosophila melanogaster]
Length = 493
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 141/353 (39%), Positives = 193/353 (54%), Gaps = 13/353 (3%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F K FEV L+ VSQ + GKN+V LEFH +D L+E+ FHIP
Sbjct: 97 VLSFDKESKTIFEVPLSHVSQC-VTGKNEVTLEFHQNDDAPVG----LLEMRFHIPA--- 148
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P F +MS A V + E+V F I ILTPRGRY +++ +F +L G
Sbjct: 149 --VESAEEDPVDKFHQNVMSKASVISASGESVAIFREIQILTPRGRYDIKIFSTFFQLHG 206
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI SV+RLF+LP + F V++LDPPI++GQT Y ++VL F D EL
Sbjct: 207 KTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLDPPIKQGQTRYHYLVLLFAPDEETTIEL 266
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
SE L KY+ KLE G ++EV +++ L G KIT PG F AV S KA
Sbjct: 267 PFSEAELRDKYEGKLEKEISGPVYEVMGKVMKVLIGRKITGPGNFIGHSGTAAVGCSFKA 326
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLE+ F ++ KPP I EEI V F R +GGS FD + LK H+F
Sbjct: 327 AAGYLYPLERGFIYIHKPPLHIRFEEISSVNFAR--SGGST-RSFDFEVTLKNGTVHIFS 383
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIK 353
+I++ EY LFD+I+ K L + N+G K+ D+++ D +L R+K
Sbjct: 384 SIEKEEYAKLFDYITQKKLHVSNMGKDKSGYKDVDFGDSDNENEPDAYLARLK 436
>gi|169647751|gb|ACA61877.1| CG4797 [Drosophila melanogaster]
gi|169647753|gb|ACA61878.1| CG4797 [Drosophila melanogaster]
gi|169647759|gb|ACA61881.1| CG4797 [Drosophila melanogaster]
gi|169647813|gb|ACA61908.1| SSRP1 [Drosophila melanogaster]
gi|169647815|gb|ACA61909.1| SSRP1 [Drosophila melanogaster]
gi|169647821|gb|ACA61912.1| SSRP1 [Drosophila melanogaster]
Length = 493
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 140/353 (39%), Positives = 193/353 (54%), Gaps = 13/353 (3%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F K FEV L+ VSQ + GKN+V LEFH +D L+E+ FHIP
Sbjct: 97 VLSFDKESKTIFEVPLSHVSQC-VTGKNEVTLEFHQNDDAPVG----LLEMRFHIPA--- 148
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P F +MS A V + E++ F I ILTPRGRY +++ +F +L G
Sbjct: 149 --VESAEEDPVDKFHQNVMSKASVISASGESIAIFREIQILTPRGRYDIKIFSTFFQLHG 206
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI SV+RLF+LP + F V++LDPPI++GQT Y ++VL F D EL
Sbjct: 207 KTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLDPPIKQGQTRYHYLVLLFAPDEETTIEL 266
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
SE L KY+ KLE G ++EV +++ L G KIT PG F AV S KA
Sbjct: 267 PFSEAELRDKYEGKLEKEISGPVYEVMGKVMKVLIGRKITGPGNFIGHSGTAAVGCSFKA 326
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLE+ F ++ KPP I EEI V F R +GGS FD + LK H+F
Sbjct: 327 AAGYLYPLERGFIYIHKPPLHIRFEEISSVNFAR--SGGST-RSFDFEVTLKNGTVHIFS 383
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIK 353
+I++ EY LFD+I+ K L + N+G K+ D+++ D +L R+K
Sbjct: 384 SIEKEEYAKLFDYITQKKLHVSNMGKDKSGYKDVDFGDSDNENEPDAYLARLK 436
>gi|50420839|ref|XP_458960.1| DEHA2D11374p [Debaryomyces hansenii CBS767]
gi|74602538|sp|Q6BS60.1|POB3_DEBHA RecName: Full=FACT complex subunit POB3; AltName: Full=Facilitates
chromatin transcription complex subunit POB3
gi|49654627|emb|CAG87121.1| DEHA2D11374p [Debaryomyces hansenii CBS767]
Length = 540
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 152/429 (35%), Positives = 236/429 (55%), Gaps = 34/429 (7%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEK--DSLMEISFHIP--- 56
L F V K FE+ +++S + L GKN+V +EF++D GAN K D ++E+ F+IP
Sbjct: 123 LVFQVNNKPDFEIPYSEISNSNLTGKNEVAVEFNLD---GANSKAGDEMVEMRFYIPGTL 179
Query: 57 -NSNTQFVGDENH-----------PPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPR 104
N T V +E + A VF +++ AD+G EA+V+F + LTPR
Sbjct: 180 ENETTPAVKNEENGEVKEEETEEISAATVFYEQLKDKADIGQVAGEAIVSFSDVLFLTPR 239
Query: 105 GRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYP 164
GRY ++++ + LRL+G+ D+KIQY+ + R+F LPK ++ H +V+ +DPP+R+GQT YP
Sbjct: 240 GRYDIDMYPTSLRLRGKTYDYKIQYNQIERIFSLPKPDEAHHLLVIQIDPPLRQGQTKYP 299
Query: 165 HIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGK 224
+V+QF + ++ +L +SEE N KYKD+L+ SY H V + +GL+ ++ PG
Sbjct: 300 FLVMQFAKEEEIELDLNVSEEEYNDKYKDRLKKSYDSQTHLVMSHCFKGLTERRLVVPGS 359
Query: 225 FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGG-SNMH 283
F+S + SLKA +G LYPL++ F F+ KP I EI + R AGG S
Sbjct: 360 FQSRFLQPGISCSLKASEGYLYPLDRCFLFVTKPTVYIPFSEISSITMSRTGAGGVSTSR 419
Query: 284 YFDLLIRLK-TEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDD 342
FD+ I L+ + Q H F +I+R E + ++ KGL+I N + A+ ++
Sbjct: 420 TFDMDITLRGSNQSHNFGSIEREEQETIENYCLQKGLRIKNEEKLAKAMLAKAM---NET 476
Query: 343 DAVDPHLERIKNEAGGDESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGE----KEK 398
D + AG D+ + D DF + GS +D + E DSDAS S E ++
Sbjct: 477 ADDDDDADVDMGSAGDDDDESADDDF-----NSGSDSDVAEEFDSDASVSDAEMSDSNQE 531
Query: 399 PAKKESKKE 407
P +K+ K E
Sbjct: 532 PPQKKPKNE 540
>gi|169647755|gb|ACA61879.1| CG4797 [Drosophila melanogaster]
gi|169647817|gb|ACA61910.1| SSRP1 [Drosophila melanogaster]
Length = 493
Score = 231 bits (589), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 140/353 (39%), Positives = 193/353 (54%), Gaps = 13/353 (3%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F K FEV L+ VSQ + GKN+V LEFH +D L+E+ FHIP
Sbjct: 97 VLSFDKESKTIFEVPLSHVSQC-VTGKNEVTLEFHQNDDAPVG----LLEMRFHIPA--- 148
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P F +MS A V + E++ F I ILTPRGRY +++ +F +L G
Sbjct: 149 --VESAEEDPVDKFHQNVMSKASVISASGESIAIFREIQILTPRGRYDIKIFSTFFQLHG 206
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI SV+RLF+LP + F V++LDPPI++GQT Y ++VL F D EL
Sbjct: 207 KTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLDPPIKQGQTRYHYLVLLFAPDEETTIEL 266
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
SE L KY+ KLE G ++EV +++ L G KIT PG F AV S KA
Sbjct: 267 PFSEAELRDKYEGKLEKEISGPVYEVMGKVMKVLIGRKITGPGNFIGHSGTAAVGCSFKA 326
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLE+ F ++ KPP I EEI V F R +GGS FD + LK H+F
Sbjct: 327 AAGYLYPLERGFIYIHKPPLHIRFEEISSVNFAR--SGGST-RSFDFEVTLKNGTVHIFS 383
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIK 353
+I++ EY LFD+I+ K L + N+G K+ D+++ D +L R+K
Sbjct: 384 SIEKEEYAKLFDYITQKKLHVSNMGKDKSGYKDVDFGDSDNENEPDAYLARLK 436
>gi|320583136|gb|EFW97352.1| DNA polymerase delta binding protein FACT complex subunit, putative
[Ogataea parapolymorpha DL-1]
Length = 527
Score = 231 bits (589), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 147/421 (34%), Positives = 227/421 (53%), Gaps = 32/421 (7%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEF-----HVDDTTGANEKDSLMEISFHIP 56
L F V + AFE+ +D++ + L KN+V +E H + TG D L+E+ +IP
Sbjct: 121 LIFNVNNRPAFEIPYSDITNSNLSRKNEVTVEMNLGEKHEPERTG----DELVEMKLYIP 176
Query: 57 NSNTQFV----------GDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGR 106
+ ++ E AQVF D++ ADVG EA+V+FE I LTPRGR
Sbjct: 177 GTLSEEEEEGEDGEKNEASEPRSLAQVFSDQLREKADVGQVTGEAIVSFEEILFLTPRGR 236
Query: 107 YSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHI 166
Y V+++ +F+RL+G+ D+K+QYS + R+F LPK Q + +V+ +DPP+R+GQT Y +
Sbjct: 237 YDVDMYDTFMRLRGKTYDYKLQYSQIQRIFSLPKLYQLNHLIVLQVDPPLRQGQTRYSFL 296
Query: 167 VLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFR 226
+Q ++ ++ EL + +E +KYK++L +Y + V T+IL+G + ++ PG F
Sbjct: 297 TIQVSSEEEIEVELNLDDEEYESKYKERLNKTYNNNTYMVMTSILKGFTERRVVVPGNFM 356
Query: 227 SAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFD 286
S A+ SLKA +G LYPLEK F+ KP LI + EI + F R +G FD
Sbjct: 357 SKDSQVAISCSLKANEGQLYPLEKCLLFVTKPTVLIPYSEITNIVFSRIGSGTGASRTFD 416
Query: 287 LLIRLKT-EQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAV 345
+ + L+ + H F N+ R E L +F K LK+ N + +A+ + D D +
Sbjct: 417 MEVNLRNGARSHSFGNMDRGEQTLLENFFKSKNLKVRNDEKVAQEMLASAMAESDGDSDM 476
Query: 346 DPHLERIKNEAGGDESDEEDSDFVADKDDGGSPTDDSGEEDSDASES-GGEKEKPAKKES 404
D D+ + D DF KD+ S +D + E DSDAS S GE ++P KK+
Sbjct: 477 DM--------GSADDDESPDEDF---KDEDMSGSDVAEEFDSDASVSEDGEDDEPQKKKP 525
Query: 405 K 405
K
Sbjct: 526 K 526
>gi|328871503|gb|EGG19873.1| structure-specific recognition protein 1 [Dictyostelium
fasciculatum]
Length = 510
Score = 231 bits (589), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 128/322 (39%), Positives = 197/322 (61%), Gaps = 11/322 (3%)
Query: 8 QKQAFEVSLADVSQT--QLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFVGD 65
QK FE ++++SQ+ L KN++ +EFH D+T E +SL+E+ + P S + +
Sbjct: 133 QKTLFEFPISEISQSIINLSNKNELTMEFH-HDSTLDEEDESLVEVRLYNPFSKSLKEDE 191
Query: 66 EN-HPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAND 124
+N P + F+D ++ +D+ G+ V E I ++TPRGR VE++ +FLRL G+ +D
Sbjct: 192 DNTEDPVKDFQDALLRKSDISQVGKRIAV-LENIQLVTPRGRCDVEMYPTFLRLHGKTHD 250
Query: 125 FKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSE 184
+K+ Y+++ +LF LPK +Q + + V++LDPP+R+G+T Y H+V+Q + EL +++
Sbjct: 251 YKVIYNTISKLFQLPKQDQANMYFVISLDPPVRQGKTKYDHLVIQLPKNQEASVELNLTD 310
Query: 185 ELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGV 244
E KYKDKL P+ G + + IL L+G I PG F+SA ++K SLKA +G
Sbjct: 311 E-AQEKYKDKLSPTMDGTFYVIVRRILTSLTGKNIIVPGNFQSANQFNSIKCSLKANEGD 369
Query: 245 LYPLEKSFFFLPKPPTLILHEEIDYVEFERH--AAGGSNM---HYFDLLIRLKTEQEHLF 299
LYPLE+SFFF+ KPPT I +ID++EF R + G N FDL I LK + F
Sbjct: 370 LYPLERSFFFIYKPPTYIKFTDIDFIEFSRAPTSVTGRNAPSSRNFDLGITLKNQTNIQF 429
Query: 300 RNIQRNEYHNLFDFISGKGLKI 321
NI + EY NL +FI KG+K+
Sbjct: 430 TNILKEEYENLHNFIQSKGIKV 451
>gi|169647761|gb|ACA61882.1| CG4797 [Drosophila melanogaster]
gi|169647823|gb|ACA61913.1| SSRP1 [Drosophila melanogaster]
Length = 493
Score = 231 bits (589), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 140/353 (39%), Positives = 193/353 (54%), Gaps = 13/353 (3%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F K FEV L+ VSQ + GKN+V LEFH +D L+E+ FHIP
Sbjct: 97 VLSFDKESKTIFEVPLSHVSQC-VTGKNEVTLEFHQNDDAPVG----LLEMRFHIPA--- 148
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P F +MS A V + E++ F I ILTPRGRY +++ +F +L G
Sbjct: 149 --VESAEEDPVDKFHQNVMSKASVISASGESIAIFREIQILTPRGRYDIKIFSTFFQLHG 206
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI SV+RLF+LP + F V++LDPPI++GQT Y ++VL F D EL
Sbjct: 207 KTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLDPPIKQGQTRYHYLVLLFAPDEETTIEL 266
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
SE L KY+ KLE G ++EV +++ L G KIT PG F AV S KA
Sbjct: 267 PFSEAELRDKYEGKLEKEISGPVYEVMGKVMKVLIGRKITGPGNFIGHSGTAAVGCSFKA 326
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLE+ F ++ KPP I EEI V F R +GGS FD + LK H+F
Sbjct: 327 AAGYLYPLERGFIYIHKPPLHIRFEEISSVNFAR--SGGST-RSFDFEVTLKNGTVHIFS 383
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIK 353
+I++ EY LFD+I+ K L + N+G K+ D+++ D +L R+K
Sbjct: 384 SIEKEEYAKLFDYITQKKLHVSNMGKDKSGYKDVDFGDSDNENEPDAYLARLK 436
>gi|169647785|gb|ACA61894.1| CG4797 [Drosophila melanogaster]
gi|169647847|gb|ACA61925.1| SSRP1 [Drosophila melanogaster]
Length = 493
Score = 231 bits (588), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 140/353 (39%), Positives = 193/353 (54%), Gaps = 13/353 (3%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F K FEV L+ VSQ + GKN+V LEFH +D L+E+ FHIP
Sbjct: 97 VLSFDKESKTIFEVPLSHVSQC-VTGKNEVTLEFHQNDDAPVG----LLEMRFHIPA--- 148
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P F +MS A V + E++ F I ILTPRGRY +++ +F +L G
Sbjct: 149 --VESAEEDPVDKFHQNVMSKASVISASGESIAIFREIQILTPRGRYDIKIFSTFFQLHG 206
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI SV+RLF+LP + F V++LDPPI++GQT Y ++VL F D EL
Sbjct: 207 KTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLDPPIKQGQTRYHYLVLLFAPDEETTIEL 266
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
SE L KY+ KLE G ++EV +++ L G KIT PG F AV S KA
Sbjct: 267 PFSEAELRDKYEGKLEKEISGPVYEVMGKVMKVLIGRKITGPGNFIGHSGTAAVGCSFKA 326
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLE+ F ++ KPP I EEI V F R +GGS FD + LK H+F
Sbjct: 327 AAGYLYPLERGFIYIHKPPLHIRFEEISSVNFAR--SGGSTRS-FDFEVTLKNGTVHIFS 383
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIK 353
+I++ EY LFD+I+ K L + N+G K+ D+++ D +L R+K
Sbjct: 384 SIEKEEYAKLFDYITQKKLHVSNMGKDKSGYKDVDFGDSDNENEPDAYLARLK 436
>gi|169647733|gb|ACA61868.1| CG4797 [Drosophila melanogaster]
gi|169647735|gb|ACA61869.1| CG4797 [Drosophila melanogaster]
gi|169647745|gb|ACA61874.1| CG4797 [Drosophila melanogaster]
gi|169647749|gb|ACA61876.1| CG4797 [Drosophila melanogaster]
gi|169647763|gb|ACA61883.1| CG4797 [Drosophila melanogaster]
gi|169647767|gb|ACA61885.1| CG4797 [Drosophila melanogaster]
gi|169647777|gb|ACA61890.1| CG4797 [Drosophila melanogaster]
gi|169647779|gb|ACA61891.1| CG4797 [Drosophila melanogaster]
gi|169647783|gb|ACA61893.1| CG4797 [Drosophila melanogaster]
gi|169647787|gb|ACA61895.1| CG4797 [Drosophila melanogaster]
gi|169647795|gb|ACA61899.1| SSRP1 [Drosophila melanogaster]
gi|169647797|gb|ACA61900.1| SSRP1 [Drosophila melanogaster]
gi|169647807|gb|ACA61905.1| SSRP1 [Drosophila melanogaster]
gi|169647811|gb|ACA61907.1| SSRP1 [Drosophila melanogaster]
gi|169647825|gb|ACA61914.1| SSRP1 [Drosophila melanogaster]
gi|169647829|gb|ACA61916.1| SSRP1 [Drosophila melanogaster]
gi|169647839|gb|ACA61921.1| SSRP1 [Drosophila melanogaster]
gi|169647841|gb|ACA61922.1| SSRP1 [Drosophila melanogaster]
gi|169647845|gb|ACA61924.1| SSRP1 [Drosophila melanogaster]
gi|169647849|gb|ACA61926.1| SSRP1 [Drosophila melanogaster]
Length = 493
Score = 231 bits (588), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 140/353 (39%), Positives = 193/353 (54%), Gaps = 13/353 (3%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F K FEV L+ VSQ + GKN+V LEFH +D L+E+ FHIP
Sbjct: 97 VLSFDKESKTIFEVPLSHVSQC-VTGKNEVTLEFHQNDDAPVG----LLEMRFHIPA--- 148
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P F +MS A V + E++ F I ILTPRGRY +++ +F +L G
Sbjct: 149 --VESAEEDPVDKFHQNVMSKASVISASGESIAIFREIQILTPRGRYDIKIFSTFFQLHG 206
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI SV+RLF+LP + F V++LDPPI++GQT Y ++VL F D EL
Sbjct: 207 KTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLDPPIKQGQTRYHYLVLLFAPDEETTIEL 266
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
SE L KY+ KLE G ++EV +++ L G KIT PG F AV S KA
Sbjct: 267 PFSEAELRDKYEGKLEKEISGPVYEVMGKVMKVLIGRKITGPGNFIGHSGTAAVGCSFKA 326
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLE+ F ++ KPP I EEI V F R +GGS FD + LK H+F
Sbjct: 327 AAGYLYPLERGFIYIHKPPLHIRFEEISSVNFAR--SGGSTRS-FDFEVTLKNGTVHIFS 383
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIK 353
+I++ EY LFD+I+ K L + N+G K+ D+++ D +L R+K
Sbjct: 384 SIEKEEYAKLFDYITQKKLHVSNMGKDKSGYKDVDFGDSDNENEPDAYLARLK 436
>gi|393243097|gb|EJD50613.1| FACT complex subunit POB3 [Auricularia delicata TFB-10046 SS5]
Length = 517
Score = 231 bits (588), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 132/363 (36%), Positives = 209/363 (57%), Gaps = 25/363 (6%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEK-----DSLMEISFHIP 56
L F+V K AFEV + V+ + + GK +V +EF D T A +K D L+E+ F++P
Sbjct: 117 LAFLVSNKTAFEVPMKYVANSNIAGKTEVSVEFAPVDATAAEKKSARRYDELVEMRFYVP 176
Query: 57 N--------------SNTQFVGDENHPPAQVFRDKIMSMADVGAG-GEEAVVTFEGIAIL 101
DE AQVF D I A++G G E++V FE + ++
Sbjct: 177 GVVERAADDDDDKDKEKKSDDDDEEQSAAQVFHDAIRDRAEIGQGIMGESIVLFEDVLVI 236
Query: 102 TPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQT 161
TPRGRY +++ F+RL+G+ D+KI YS++ RLFLLPK+++ H ++ LDPPIR+GQT
Sbjct: 237 TPRGRYDIDMFTDFMRLRGKTYDYKIMYSAINRLFLLPKADEIHVQFIIGLDPPIRQGQT 296
Query: 162 LYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITK 221
YP++V F D ++ +L + EE + +KY+D+L+ Y+ +++V +++ RGL+ KIT
Sbjct: 297 KYPYLVTMFSRDQELEIDLALDEETIKSKYEDRLDKHYETAMYQVVSSVFRGLTNKKITG 356
Query: 222 PGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSN 281
F+S ++K +LKA G L+ LEK+ FF+ K PTLI +I V F R G ++
Sbjct: 357 TSSFQSVGGHPSIKCNLKASQGELFVLEKALFFVTKQPTLIDFADIHQVVFSRLGGGMAS 416
Query: 282 MHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMN-LGDMKTTDGVAAVLQED 340
D+ + +T E +F ++ + E+ L F+ GK +K N +GD D +AA L +
Sbjct: 417 ARTIDVKVVKQTGPELVFTSMNKEEHEGLEAFLKGKKVKTKNEMGD----DLIAAALGDG 472
Query: 341 DDD 343
DD+
Sbjct: 473 DDE 475
>gi|290280|gb|AAA28914.1| single-stranded recognition protein [Drosophila melanogaster]
Length = 723
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 139/353 (39%), Positives = 191/353 (54%), Gaps = 13/353 (3%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F K FEV L+ VSQ + GKN+V LEFH +D L+E+ FHIP
Sbjct: 118 VLSFDKESKTIFEVPLSHVSQC-VTGKNEVTLEFHQNDDAPVG----LLEMRFHIPA--- 169
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P F +MS A V + E++ F I ILTPR RY +++ +F +L G
Sbjct: 170 --VESAEEDPVDKFHQNVMSKASVISASGESIAIFREIQILTPRRRYDIKIFSTFFQLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI SV+RLF+LP + F V++LDPPI++GQT Y ++VL F D EL
Sbjct: 228 KTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLDPPIKQGQTRYHYLVLLFAPDEETTIEL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
SE L KY+ KLE G ++EV +++ L G KIT PG F AV S KA
Sbjct: 288 PFSEAELRDKYEGKLEKEISGPVYEVMGKVMKVLIGRKITGPGNFIGHSGTAAVGCSFKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLE+ F ++ KPP I EEI V F R +GGS FD + LK H+F
Sbjct: 348 AAGYLYPLERGFIYIHKPPLHIRFEEISSVNFAR--SGGSTRS-FDFEVTLKNGTVHIFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIK 353
+I++ EY LFD+I+ K L + N G K+ D+++ D +L R+K
Sbjct: 405 SIEKEEYAKLFDYITQKKLHVSNTGKDKSGYKDVDFGDSDNENEPDAYLARLK 457
>gi|388579023|gb|EIM19353.1| SSrecog-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 564
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 131/371 (35%), Positives = 202/371 (54%), Gaps = 28/371 (7%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGAN-----------EKDSLME 50
L+F V + FE+ + ++ + + K +V LEF +D T A D L+E
Sbjct: 114 LSFQVSGRTMFEIPVQKIANSNIASKTEVSLEF-IDPTASAQGEPTSGPSSSRRADELVE 172
Query: 51 ISFHIPNSNTQ--FVGD-------------ENHPPAQVFRDKIMSMADVGAGGEEAVVTF 95
+ F+IPNS+ F+GD E AQ+F D+I A++G + +V F
Sbjct: 173 MRFYIPNSSKARGFIGDNDDDDSKSQKSDQEEQSVAQLFHDQIKDKAEIGKVSGDGLVVF 232
Query: 96 EGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPP 155
I ++TPRGRY ++++ +F+RL+G+ D+KI YSS+ RLF+LPK++ H +VV LDPP
Sbjct: 233 NDILVVTPRGRYEIDMYPTFIRLRGKTYDYKILYSSIKRLFVLPKTDDMHVLLVVGLDPP 292
Query: 156 IRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLS 215
IR+GQT YP+I +QF + + + + M E + KY D+L+ Y ++V + RGLS
Sbjct: 293 IRQGQTRYPYITMQFPNNEELDATINMEESEIQEKYGDRLQKHYDAPAYQVVAQVFRGLS 352
Query: 216 GAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERH 275
G IT P F+S + A+K ++KA G LY +EKS FF+ K P I +I +F R
Sbjct: 353 GKDITTPKTFKSFSNQPAIKCNVKANQGDLYVMEKSLFFVTKQPIYIPFSDIQSAQFARV 412
Query: 276 AAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAA 335
S+ FDL I K+ E++F I R E+ L +F + K +K N + G
Sbjct: 413 GGAISSSRTFDLRIVQKSGTENVFSGINREEHEPLEEFFTNKKIKTKNNLNEDLI-GAPI 471
Query: 336 VLQEDDDDAVD 346
+QE+ D +D
Sbjct: 472 QIQEESDSEMD 482
>gi|169647743|gb|ACA61873.1| CG4797 [Drosophila melanogaster]
gi|169647805|gb|ACA61904.1| SSRP1 [Drosophila melanogaster]
Length = 493
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 140/353 (39%), Positives = 193/353 (54%), Gaps = 13/353 (3%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F K FEV L+ VSQ + GKN+V LEFH +D L+E+ FHIP
Sbjct: 97 VLSFDKESKTIFEVPLSHVSQC-VTGKNEVTLEFHQNDDAPVG----LLEMRFHIPA--- 148
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P F +MS A V + E++ F I ILTPRGRY +++ +F +L G
Sbjct: 149 --VESAEEDPVDKFHQNVMSKASVISASGESIAIFREIQILTPRGRYDIKIFSTFFQLHG 206
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI SV+RLF+LP + F V++LDPPI++GQT Y ++VL F D EL
Sbjct: 207 KTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLDPPIKQGQTRYHYLVLLFAPDEETTIEL 266
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
SE L KY+ KLE G ++EV +++ L G KIT PG F AV S KA
Sbjct: 267 PFSEAELRDKYEGKLEKEISGPVYEVMGKVMKVLIGRKITGPGNFIGHSGMAAVGCSFKA 326
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLE+ F ++ KPP I EEI V F R +GGS FD + LK H+F
Sbjct: 327 AAGYLYPLERGFIYIHKPPLHIRFEEISSVNFAR--SGGST-RSFDFEVTLKNGTVHIFS 383
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIK 353
+I++ EY LFD+I+ K L + N+G K+ D+++ D +L R+K
Sbjct: 384 SIEKEEYAKLFDYITQKKLHVSNMGKDKSGYKDVDFGDSDNENEPDAYLARLK 436
>gi|169647757|gb|ACA61880.1| CG4797 [Drosophila melanogaster]
gi|169647819|gb|ACA61911.1| SSRP1 [Drosophila melanogaster]
Length = 493
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 140/353 (39%), Positives = 193/353 (54%), Gaps = 13/353 (3%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F K FEV L+ VSQ + GKN+V LEFH +D L+E+ FHIP
Sbjct: 97 VLSFDKESKTIFEVPLSHVSQC-VTGKNEVTLEFHQNDDAPVG----LLEMRFHIPA--- 148
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P F +MS A V + E++ F I ILTPRGRY +++ +F +L G
Sbjct: 149 --VESAEEDPVDKFHQNVMSKASVISASGESIAIFREIQILTPRGRYDIKIFSTFFQLHG 206
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI SV+RLF+LP + F V++LDPPI++GQT Y ++VL F D EL
Sbjct: 207 KTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLDPPIKQGQTRYHYLVLLFAPDEETTIEL 266
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
SE L KY+ KLE G ++EV +++ L G KIT PG F AV S KA
Sbjct: 267 PFSEAELRDKYEGKLEKEISGPVYEVMGKVMKVLIGRKITGPGNFIGHSGTAAVGCSFKA 326
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLE+ F ++ KPP I EEI V F R +GGS FD + LK H+F
Sbjct: 327 AAGYLYPLERGFIYIHKPPLHIRFEEISSVNFAR--SGGST-RSFDSEVTLKNGTVHIFS 383
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIK 353
+I++ EY LFD+I+ K L + N+G K+ D+++ D +L R+K
Sbjct: 384 SIEKEEYAKLFDYITQKKLHVSNMGKDKSGYKDVDFGDSDNENEPDAYLARLK 436
>gi|169647765|gb|ACA61884.1| CG4797 [Drosophila melanogaster]
gi|169647827|gb|ACA61915.1| SSRP1 [Drosophila melanogaster]
Length = 493
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 139/353 (39%), Positives = 193/353 (54%), Gaps = 13/353 (3%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F K FEV L+ VSQ + GKN+V LEFH +D L+E+ FHIP
Sbjct: 97 VLSFDKESKTIFEVPLSHVSQC-VTGKNEVTLEFHQNDDAPVG----LLEMRFHIPA--- 148
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P F +MS A V + E+ F I ILTPRGRY +++ +F +L G
Sbjct: 149 --VESAEEDPVDKFHQNVMSKASVISASGESTAIFREIQILTPRGRYDIKIFSTFFQLHG 206
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI SV+RLF+LP + F V++LDPPI++GQT Y ++VL F D EL
Sbjct: 207 KTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLDPPIKQGQTRYHYLVLLFAPDEETTIEL 266
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
SE L KY+ KLE G ++EV +++ L G KIT PG F AV S KA
Sbjct: 267 PFSEAELRDKYEGKLEKEISGPVYEVMGKVMKVLIGRKITGPGNFIGHSGTAAVGCSFKA 326
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLE+ F ++ KPP I EEI V F R +GGS FD + LK+ H+F
Sbjct: 327 AAGYLYPLERGFIYIHKPPLHIRFEEISSVNFAR--SGGST-RSFDFEVTLKSGTVHIFS 383
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIK 353
+I++ EY LFD+I+ + L + N+G K+ D+++ D +L R+K
Sbjct: 384 SIEKEEYAKLFDYITQRKLHVSNMGKDKSGYKDVDFGDSDNENEPDAYLARLK 436
>gi|46111273|ref|XP_382694.1| hypothetical protein FG02518.1 [Gibberella zeae PH-1]
gi|110287791|sp|Q4IJU0.1|POB3_GIBZE RecName: Full=FACT complex subunit POB3; AltName: Full=Facilitates
chromatin transcription complex subunit POB3
Length = 569
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 129/370 (34%), Positives = 206/370 (55%), Gaps = 30/370 (8%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANE---------------KD 46
LTF V + AFE+ +++ T L G+N+V +E + ++ GAN +D
Sbjct: 118 LTFSVQNRPAFELPYSEIGNTNLAGRNEVAVEMALPES-GANAQLGGARSKGSKAAAGRD 176
Query: 47 SLMEISFHIPNSNTQFVGD------------ENHPPAQVFRDKIMSMADVGAGGEEAVVT 94
L+E+ F+IP T+ + + A +F + ++ A++G + + T
Sbjct: 177 QLVEMRFYIPGVTTRKEAEGEDAGSDAGNDEQEKNAATLFYETLIDKAEIGETAGDTIAT 236
Query: 95 FEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDP 154
F + LTPRGR+ ++++ + RL+G+ D+KIQY ++ + +LPK ++ H +V+ LDP
Sbjct: 237 FLDVLHLTPRGRFDIDMYEASFRLRGKTYDYKIQYEAIKKFMVLPKPDEVHYMLVMGLDP 296
Query: 155 PIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGL 214
P+R+GQT YP +V+QF+ D V +L ++EE L +KY+DKLEP Y+ +H+V I RGL
Sbjct: 297 PLRQGQTRYPFVVMQFKKDEEVTIDLNLNEEELKSKYQDKLEPHYEEPLHQVVAKIFRGL 356
Query: 215 SGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFE 273
KI+ P K F + ++ Y +K S+KA +G LY LEK+F F+PKP T I +E+ V F
Sbjct: 357 GNRKISSPAKDFITHRNQYGIKCSIKASEGFLYCLEKAFMFVPKPATYIAYEQTQSVTFS 416
Query: 274 RHAAGGSNMHYFDLLIRLKT-EQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDG 332
R + S + FD+ + LK F NI R + L F KGL++ N D
Sbjct: 417 RVSGAVSALSTFDITVLLKNGAGSSQFSNISREDLKALESFFKLKGLRVKNEIDEDANLL 476
Query: 333 VAAVLQEDDD 342
AA+ Q+ DD
Sbjct: 477 AAAMNQQMDD 486
>gi|195347200|ref|XP_002040142.1| GM15512 [Drosophila sechellia]
gi|194135491|gb|EDW57007.1| GM15512 [Drosophila sechellia]
Length = 697
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 140/353 (39%), Positives = 193/353 (54%), Gaps = 13/353 (3%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F K FEV L+ VSQ + GKN+V LEFH +D L+E+ FHIP
Sbjct: 118 VLSFDKESKTIFEVPLSHVSQC-VTGKNEVTLEFHQNDDAPVG----LLEMRFHIPA--- 169
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P F +MS A V + E++ F I ILTPRGRY +++ +F +L G
Sbjct: 170 --VESAEEDPVDKFHQNVMSKASVISASGESIAIFREIQILTPRGRYDIKIFSTFFQLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI SV+RLF+LP + F V++LDPPI++GQT Y ++VL F D EL
Sbjct: 228 KTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLDPPIKQGQTRYHYLVLLFAPDEETTIEL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
SE L KY+ KLE G ++EV +++ L G KIT PG F AV S KA
Sbjct: 288 PFSEAELRDKYEGKLEKEISGPVYEVMGKVMKVLIGRKITGPGNFIGHSGTAAVGCSFKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLE+ F ++ KPP I EEI V F R +GGS FD + LK H+F
Sbjct: 348 AAGYLYPLERGFIYIHKPPLHIRFEEISSVNFAR--SGGST-RSFDFEVTLKNGTVHIFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIK 353
+I++ EY LFD+I+ K L + N+G K+ D+++ D +L R+K
Sbjct: 405 SIEKEEYAKLFDYITQKKLHVSNMGKDKSGYKDVDFGDSDNENEPDAYLARLK 457
>gi|169647731|gb|ACA61867.1| CG4797 [Drosophila melanogaster]
gi|169647793|gb|ACA61898.1| SSRP1 [Drosophila melanogaster]
Length = 493
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 140/353 (39%), Positives = 192/353 (54%), Gaps = 13/353 (3%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F K FEV L+ VSQ + GKN+V LEFH +D L+E+ FHIP
Sbjct: 97 VLSFDKESKTIFEVPLSHVSQC-VTGKNEVTLEFHQNDDAPVG----LLEMRFHIPA--- 148
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P F +MS A V + E++ F I ILTPRGRY +++ +F +L G
Sbjct: 149 --VESAEEDPVDKFHQNVMSKASVISASGESIAIFREIQILTPRGRYDIKIFSTFFQLHG 206
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI SV+RLF+LP + F V++LDPPI++GQT Y ++VL F D EL
Sbjct: 207 KTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLDPPIKQGQTRYHYLVLLFAPDEETTIEL 266
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
SE L KY+ KLE G ++EV +++ L G KIT PG F AV S KA
Sbjct: 267 PFSEAELRDKYEGKLEKEISGPVYEVMGKVMKVLIGRKITGPGNFIGHSGTAAVGCSFKA 326
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLE+ F ++ KPP I EEI V F R +GGS FD + LK H+F
Sbjct: 327 AAGYLYPLERGFIYIHKPPLHIRFEEISSVNFAR--SGGST-RSFDFEVTLKNGTVHIFS 383
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIK 353
+I++ EY LFD+I+ K L + N+G K+ D+ + D +L R+K
Sbjct: 384 SIEKEEYAKLFDYITQKKLHVSNMGKDKSGYKDVDFGDSDNGNEPDAYLARLK 436
>gi|322711860|gb|EFZ03433.1| FACT complex subunit pob3 [Metarhizium anisopliae ARSEF 23]
Length = 605
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 134/385 (34%), Positives = 208/385 (54%), Gaps = 33/385 (8%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHV---DDTTGAN--------------- 43
LTF V K AFE+ +++ T L G+N+V +E + + TG N
Sbjct: 155 LTFSVQNKPAFELPYSEIGNTNLAGRNEVAVEMSLPQDSNDTGTNGQLGGARGKGKKAGG 214
Query: 44 EKDSLMEISFHIPNSNT----------QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVV 93
+D L+E+ F+IP + T + E A +F D ++ A++G + +
Sbjct: 215 GRDQLVEMRFYIPGTTTAKKEADGDDAEEEEAEEKNAATLFYDTLIEKAEIGETAGDTIA 274
Query: 94 TFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLD 153
TF + LTPRGR+ ++++ + RL+G+ D+KIQY ++ + +LPK ++ H + + LD
Sbjct: 275 TFLDVLHLTPRGRFDIDMYEASFRLRGKTYDYKIQYEAIKKFMVLPKPDEMHCMLCIGLD 334
Query: 154 PPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRG 213
PP+R+GQT YP +V+QF+ D V +L + E L +KYKDKLEP Y+ +H V I RG
Sbjct: 335 PPLRQGQTRYPFVVMQFKKDEEVTIDLNLEESELQSKYKDKLEPHYEEPLHHVVAKIFRG 394
Query: 214 LSGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEF 272
L+ KI+ P K F + + Y +K S+KA +G LY LEK+F F+PKP T I +E+ V F
Sbjct: 395 LANKKISSPAKDFITHRSQYGIKCSIKASEGFLYCLEKAFMFVPKPATYIAYEQTQSVTF 454
Query: 273 ERHAAGGSNMHYFDLLIRLKT-EQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTD 331
R S + FD+ + +K F NI R + L F KGL++ N D
Sbjct: 455 SRVGGAVSTLSTFDITVVMKNGAGSSQFSNINREDLKALETFFKLKGLRVKNEIDEDANM 514
Query: 332 GVAAVLQEDDDDAVDPHLERIKNEA 356
AA+ ++D DD+ D E + N+A
Sbjct: 515 LAAALREQDMDDSDD---EVVANKA 536
>gi|342884654|gb|EGU84859.1| hypothetical protein FOXB_04640 [Fusarium oxysporum Fo5176]
Length = 564
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 130/374 (34%), Positives = 210/374 (56%), Gaps = 31/374 (8%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANE---------------KD 46
LTF V + AFE++ +++ T L G+N+V +E + DT GAN +D
Sbjct: 118 LTFSVQNRPAFELAYSEIGNTNLAGRNEVAVEMALPDT-GANAQLGGARSKGSKAAAGRD 176
Query: 47 SLMEISFHIPNSNTQFVGD------------ENHPPAQVFRDKIMSMADVGAGGEEAVVT 94
L+E+ F+IP T+ + + A +F + ++ A++G + + T
Sbjct: 177 QLVEMRFYIPGVTTRKEAEGEDAGSDAGNDEQEKNAATLFYETLIDKAEIGETAGDTIAT 236
Query: 95 FEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDP 154
F + LTPRGR+ ++++ + RL+G+ D+KIQY ++ + +LPK ++ H +V+ LDP
Sbjct: 237 FLDVLHLTPRGRFDIDMYEASFRLRGKTYDYKIQYEAIKKFMVLPKPDEVHYMLVMGLDP 296
Query: 155 PIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGL 214
P+R+GQT YP +V+QF+ D V +L ++E+ L +KY+DKLEP Y+ +H+V I RGL
Sbjct: 297 PLRQGQTRYPFVVMQFKKDEEVTIDLNLNEDELKSKYQDKLEPHYEEPLHQVVAKIFRGL 356
Query: 215 SGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFE 273
KI+ P K F + ++ Y +K S+KA +G LY LEK+F F+PKP I +E+ V F
Sbjct: 357 GNRKISSPAKDFITHRNQYGIKCSIKASEGFLYCLEKAFMFVPKPAVYIAYEQTQSVTFS 416
Query: 274 RHAAGGSNMHYFDLLIRLKT-EQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDG 332
R + S + FD+ + LK F NI R + L F KGL++ N D + +
Sbjct: 417 RVSGAVSALSTFDITVLLKNGAGSSQFSNISREDLKALETFFKLKGLRVKNEID-EDANL 475
Query: 333 VAAVLQEDDDDAVD 346
+AA L + DD+ D
Sbjct: 476 LAAALDQQMDDSED 489
>gi|224002190|ref|XP_002290767.1| structure specific recognition protein 1 [Thalassiosira pseudonana
CCMP1335]
gi|220974189|gb|EED92519.1| structure specific recognition protein 1 [Thalassiosira pseudonana
CCMP1335]
Length = 765
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 176/543 (32%), Positives = 282/543 (51%), Gaps = 56/543 (10%)
Query: 10 QAFEVSLADVSQTQLQG--KNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFVGDEN 67
+ + L +VSQ L G +N++ ++F DT A D L+ I F++P D++
Sbjct: 105 EMLSLDLGEVSQCVLPGNNRNEIEMQFLESDTVEAG-TDQLVAIRFYVPPDQDADPTDKD 163
Query: 68 HPP-AQVFRDKIMSMADVGAGGEEAVVTFE--GIAILTPRGRYSVELHLSFLRLQGQAND 124
P A++ + +I +A V + F+ LTPRGRYS+EL+ SFLRL+G D
Sbjct: 164 APTSAELLQSRITEVASVKKTSGAIIAEFDENKGTFLTPRGRYSIELYDSFLRLRGAKYD 223
Query: 125 FKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMS- 183
+KI+Y + RLFLLPK + H V+ LD PIR+GQ Y +V+Q + QSEL ++
Sbjct: 224 YKIKYDDISRLFLLPKQDDMHMAFVIALDKPIRQGQQRYNMLVMQCTKE---QSELNINL 280
Query: 184 -EELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAED 242
+ + +Y +++ G + + ++ K+ PGKF +A VK +L+A +
Sbjct: 281 DDATIEKEYNGEIQAHMNGSFSNLVAKTFKVITKKKVFIPGKFANANQQACVKCALRANE 340
Query: 243 GVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTE-------Q 295
G LYPLEK F F+ KP LI +EI+ VEF+R+A G + FDL + L +
Sbjct: 341 GHLYPLEKQFIFIHKPAVLIRFDEIESVEFQRYAGGQGSTRNFDLSVSLINTPGDNLAVK 400
Query: 296 EHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNE 355
E+ F I + Y +L+ F+S K ++ +K +G+ + ++ A + +E
Sbjct: 401 EYTFSGIDKTNYASLYSFLSQKKIR------IKNIEGIGS-----EEPARSAPMYNEMDE 449
Query: 356 AG---GDESDEEDSDFVADKDDG------------GSPTDDSGEEDSDASESGGEKEKPA 400
G G+ S++ED D + GS +DDS E K A
Sbjct: 450 GGEEMGESSEDEDYDQAKASESEESSSDEDDDDDLGSMSDDS---------DLAEHRKKA 500
Query: 401 KKESKKESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIK 460
K+SK +SS + + K + ++ + +K+KK+KDPNAPKR +S F FF+ +R +IK
Sbjct: 501 AKKSKDKSSKKEKPSKKSADKGSNKRKEPEKKKKQKDPNAPKRGLSAFNFFTSAKRGDIK 560
Query: 461 KSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYKNPKPMDIDSGN 520
+NP +F ++ +++G +K +S E+ YE A DKKRY+ E+ Y P+ DS +
Sbjct: 561 AANPDASFAELAKLVGAEFKGLSASEKAKYEELAANDKKRYEKEMESYVPPEE---DSDD 617
Query: 521 ESD 523
ESD
Sbjct: 618 ESD 620
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 50/77 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR M+ ++ F+ R +++ NP ++ DV + +G R+K + +E+ ++SKA A
Sbjct: 636 DPNAPKRPMNPYMLFANSVRAQVREENPDMSMGDVSKEIGIRYKAIDEKEKAKWQSKADA 695
Query: 497 DKKRYKDEISGYKNPKP 513
K+ YK E++ Y+ KP
Sbjct: 696 AKEVYKKEMAQYEKTKP 712
>gi|408391764|gb|EKJ71132.1| hypothetical protein FPSE_08638 [Fusarium pseudograminearum CS3096]
Length = 566
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 129/370 (34%), Positives = 206/370 (55%), Gaps = 30/370 (8%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANE---------------KD 46
LTF V + AFE+ +++ T L G+N+V +E + + +GAN +D
Sbjct: 118 LTFSVQNRPAFELPYSEIGNTNLAGRNEVAVEMALPE-SGANAQLGGARSKGSKAAAGRD 176
Query: 47 SLMEISFHIPNSNTQFVG------------DENHPPAQVFRDKIMSMADVGAGGEEAVVT 94
L+E+ F+IP T+ ++ A +F + ++ A++G + + T
Sbjct: 177 QLVEMRFYIPGVTTRKEAEGEDAGSDAGNDEQEKNAATLFYETLIDKAEIGETAGDTIAT 236
Query: 95 FEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDP 154
F + LTPRGR+ ++++ + RL+G+ D+KIQY ++ + +LPK ++ H +V+ LDP
Sbjct: 237 FLDVLHLTPRGRFDIDMYEASFRLRGKTYDYKIQYEAIKKFMVLPKPDEVHYMLVMGLDP 296
Query: 155 PIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGL 214
P+R+GQT YP +V+QF+ D V +L ++EE L +KY+DKLEP Y+ +H+V I RGL
Sbjct: 297 PLRQGQTRYPFVVMQFKKDEEVTIDLNLNEEELKSKYQDKLEPHYEEPLHQVVAKIFRGL 356
Query: 215 SGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFE 273
KI+ P K F + ++ Y +K S+KA +G LY LEK+F F+PKP T I +E+ V F
Sbjct: 357 GNRKISSPAKDFITHRNQYGIKCSIKASEGFLYCLEKAFMFVPKPATYIAYEQTQSVTFS 416
Query: 274 RHAAGGSNMHYFDLLIRLKT-EQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDG 332
R + S + FD+ + LK F NI R + L F KGL++ N D
Sbjct: 417 RVSGAVSALSTFDITVLLKNGAGSSQFSNISREDLKALESFFKLKGLRVKNEIDEDANLL 476
Query: 333 VAAVLQEDDD 342
AA+ Q+ DD
Sbjct: 477 AAAMNQQMDD 486
>gi|451997479|gb|EMD89944.1| hypothetical protein COCHEDRAFT_1178087 [Cochliobolus
heterostrophus C5]
Length = 569
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 157/453 (34%), Positives = 233/453 (51%), Gaps = 52/453 (11%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHV--DDTTGAN---------------E 44
LTF V + AFEV +VS T L GKN+V ++F + D +GAN
Sbjct: 120 LTFNVANRPAFEVPYTEVSNTNLAGKNEVAVDFSLPADSDSGANGQLGGARFRGKKSAGA 179
Query: 45 KDSLMEISFHIP-------------NSNTQFVGDENHPPAQVFRDKIMSMADVGAGGEEA 91
+D L+E+ F+IP +++ G+E + A +F + +M A++G +
Sbjct: 180 RDQLVEMRFYIPGLASKKEKTEDGEDASGAEDGEETNA-ANLFYETLMEKAEIGEVAGDT 238
Query: 92 VVTFEGIAILTP-RGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVV 150
TF I LTP RGR+ ++++ S RL+G+ D+KIQ+ SV + +LPK + HT + +
Sbjct: 239 FATFLDILHLTPSRGRFDIDMYESSFRLRGKTYDYKIQFDSVKKFMVLPKPDDMHTLITI 298
Query: 151 TLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTI 210
LDPP+R+GQT YP +V+QF+ D V +L M +LL KYKDKL+ Y+ I V I
Sbjct: 299 GLDPPLRQGQTRYPFLVMQFKRDEEVNLDLNMKGDLLEDKYKDKLQSHYEAPIATVVADI 358
Query: 211 LRGLSGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDY 269
RGLSG +IT+P + F S + VK S+KA +G L+ L+K+F F+PKP T I + I
Sbjct: 359 FRGLSGKRITRPSRDFISHHEQSGVKCSIKANEGHLFCLDKAFMFIPKPATYISMDNIQS 418
Query: 270 VEFERHAAGGSNMHYFDLLIRLKTEQ-EHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMK 328
V R + FD+ +K EH F NI R E L +F KG+K N +M
Sbjct: 419 VTMSRVGGAMAASRTFDITFTMKNGMAEHQFSNINREEQQPLENFFRAKGIKTKN--EMA 476
Query: 329 TTDG--VAAVLQEDDDDAVDPHLERIKNEAG-----------GDESDEEDSDFVADKDDG 375
G +AA LQ++D + D + A D E +F +D
Sbjct: 477 DDSGAILAAALQDEDLASSDDGAPANRGSADEDDESVDEDFQADSESEVGEEFDSDHQSS 536
Query: 376 GSPTD---DSGEEDSDASESGGEKEKPAKKESK 405
GS +D D E + DA+E+ E+ K +K S+
Sbjct: 537 GSDSDAEMDDAESEGDAAEAVPERPKKKQKVSQ 569
>gi|50551567|ref|XP_503258.1| YALI0D25058p [Yarrowia lipolytica]
gi|74634196|sp|Q6C7V4.1|POB3_YARLI RecName: Full=FACT complex subunit POB3; AltName: Full=Facilitates
chromatin transcription complex subunit POB3
gi|49649126|emb|CAG81462.1| YALI0D25058p [Yarrowia lipolytica CLIB122]
Length = 544
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 141/381 (37%), Positives = 203/381 (53%), Gaps = 44/381 (11%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFH--VDDTTGANEKDSLMEISFHIPNSN 59
L F V K AFE+ A+V+ + L GKN+V LEF D G D L+E+ F++P
Sbjct: 127 LVFSVANKPAFEIPYAEVANSNLVGKNEVALEFQQPADGRAG----DELVEMRFYVPGV- 181
Query: 60 TQFVGDEN-------------------------------HPPAQVFRDKIMSMADVGAGG 88
T GDEN AQ+F D + AD+GA
Sbjct: 182 TSVEGDENPKKKQKTEKEGEEGKEGDDDADADDESEEEVQSTAQIFYDTLKEKADIGAVA 241
Query: 89 EEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFV 148
AVV+ I ++ PRGRY ++++ +F+RL+G+ D+ +QY V RL +LPK + H +
Sbjct: 242 GTAVVSLSEIYLVIPRGRYDIDMYANFMRLRGKTYDYMVQYKHVQRLIVLPKPDDLHNIL 301
Query: 149 VVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDK-LEPSYKGLIHEVF 207
VV LDPP+R+GQT YP +V+QF + ++ EL + + KY DK L+ SY H+V
Sbjct: 302 VVQLDPPLRQGQTRYPFLVMQFLREAEIKVELNVDDAEFAEKYADKGLKQSYDESAHQVV 361
Query: 208 TTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEI 267
+I RGL+G K+T PG F++ V SLKA +G LYPLE++F FL K P I EI
Sbjct: 362 GSIFRGLTGRKLTVPGSFKTVHGHAGVSCSLKASEGHLYPLERNFLFLSK-PVFIPFAEI 420
Query: 268 DYVEFERHAAGGSNMHYFDLLIRLKTEQ-EHLFRNIQRNEYHNLFDFISGKGLKIMN-LG 325
+ R + + FD+ ++L+ Q E+ F NI + E L FI KG+++ N L
Sbjct: 421 QDITLSRVGSSVTTSRTFDMTLKLRNAQGEYQFSNISKEEQEGLEAFIKSKGIRLKNDLA 480
Query: 326 DMKTTDGVAAVLQEDDDDAVD 346
+ K +AA L E DDD+ D
Sbjct: 481 EEKAL--LAATLAEVDDDSDD 499
>gi|346322018|gb|EGX91617.1| FACT complex subunit pob3 [Cordyceps militaris CM01]
Length = 570
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 131/385 (34%), Positives = 210/385 (54%), Gaps = 28/385 (7%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHV----DDTTGANEK--------DSLM 49
+ F V + AFE+ A++ T L G+N+V +E + +DT AN K D L+
Sbjct: 117 IVFNVQNRPAFELPYAEIGNTNLAGRNEVAVEMSLPQDGNDTATANGKGKKAAAGRDQLV 176
Query: 50 EISFHIPNSNTQ--------FVGDENHPPAQ-----VFRDKIMSMADVGAGGEEAVVTFE 96
E+ F++P + T+ G + P A+ +F + +M A++G + + TF
Sbjct: 177 EMRFYVPGTTTKKEVADGEDGEGSDQEPEAEKNAATLFYETLMDKAEIGEMAGDTIATFL 236
Query: 97 GIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPI 156
+ LTPRGR+ ++++ + RL+G+ D+KIQY ++ + +LPK + H + + LDPP+
Sbjct: 237 DVLHLTPRGRFDIDMYEASFRLRGKTYDYKIQYDAIKKFMVLPKPDDMHCMLCIGLDPPL 296
Query: 157 RKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSG 216
R+GQT YP +V+QF+ D V +L + E L +KYKDKL+ Y+ +H V I RGL+
Sbjct: 297 RQGQTRYPFVVMQFKKDEEVTIDLNLDEATLESKYKDKLDAHYEEPLHHVVAKIFRGLAN 356
Query: 217 AKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERH 275
KI+ P K F + + Y +K S+KA +G LY LEK+F F+PKP T I +E+ + F R
Sbjct: 357 KKISSPAKDFITHRSQYGIKCSIKASEGFLYCLEKAFMFVPKPATYIAYEQTQSITFSRV 416
Query: 276 AAGGSNMHYFDLLIRLK-TEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVA 334
S + FD+ + +K F NI R + L F KGL++ N D + + +A
Sbjct: 417 GGAVSTLSTFDITVAMKGGTGSSQFSNINREDLKALETFFKLKGLRVKNEID-EDANLLA 475
Query: 335 AVLQEDDDDAVDPHLERIKNEAGGD 359
A L+E D D D + + +G D
Sbjct: 476 AALREQDMDDSDDEVVKGAGVSGAD 500
>gi|169647737|gb|ACA61870.1| CG4797 [Drosophila melanogaster]
gi|169647799|gb|ACA61901.1| SSRP1 [Drosophila melanogaster]
Length = 493
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 139/353 (39%), Positives = 192/353 (54%), Gaps = 13/353 (3%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F K FEV L+ VSQ + GKN+V LEFH +D L+E+ FHIP
Sbjct: 97 VLSFDKESKTIFEVPLSHVSQC-VTGKNEVTLEFHQNDDAPVG----LLEMRFHIPA--- 148
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P F +MS A V + E++ F I ILTPRGRY +++ +F +L G
Sbjct: 149 --VESAEEDPVDKFHQNVMSKASVISASGESIAIFREIQILTPRGRYDIKIFSTFFQLHG 206
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI SV+RLF+LP + F V++LDPPI++GQT Y ++VL D EL
Sbjct: 207 KTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLDPPIKQGQTRYHYLVLLLAPDEETTIEL 266
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
SE L KY+ KLE G ++EV +++ L G KIT PG F AV S KA
Sbjct: 267 PFSEAELRDKYEGKLEKEISGPVYEVMGKVMKVLIGRKITGPGNFIGHSGTAAVGCSFKA 326
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLE+ F ++ KPP I EEI V F R +GGS FD + LK H+F
Sbjct: 327 AAGYLYPLERGFIYIHKPPLHIRFEEISSVNFAR--SGGST-RSFDFEVTLKNGTVHIFS 383
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIK 353
+I++ EY LFD+I+ K L + N+G K+ D+++ D +L R+K
Sbjct: 384 SIEKEEYAKLFDYITQKKLHVSNMGKDKSGYKDVDFGDSDNENEPDAYLARLK 436
>gi|169647739|gb|ACA61871.1| CG4797 [Drosophila melanogaster]
gi|169647801|gb|ACA61902.1| SSRP1 [Drosophila melanogaster]
Length = 493
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 139/353 (39%), Positives = 192/353 (54%), Gaps = 13/353 (3%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F K FEV L+ VSQ + GKN+V LE H +D L+E+ FHIP
Sbjct: 97 VLSFDKESKTIFEVPLSHVSQC-VTGKNEVTLELHQNDDAPVG----LLEMRFHIPA--- 148
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P F +MS A V + E++ F I ILTPRGRY +++ +F +L G
Sbjct: 149 --VESAEEDPVDKFHQNVMSKASVISASGESIAIFREIQILTPRGRYDIKIFSTFFQLHG 206
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI SV+RLF+LP + F V++LDPPI++GQT Y ++VL F D EL
Sbjct: 207 KTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLDPPIKQGQTRYHYLVLLFAPDEETTIEL 266
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
SE L KY+ KLE G ++EV +++ L G KIT PG F AV S KA
Sbjct: 267 PFSEAELRDKYEGKLEKEISGPVYEVMGKVMKVLIGRKITGPGNFIGHSGTAAVGCSFKA 326
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLE+ F ++ KPP I EEI V F R +GGS FD + LK H+F
Sbjct: 327 AAGYLYPLERGFIYIHKPPLHIRFEEISSVNFAR--SGGST-RSFDFEVTLKNGTVHIFS 383
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIK 353
+I++ EY LFD+I+ K L + N+G K+ D+++ D +L R+K
Sbjct: 384 SIEKEEYAKLFDYITQKKLHVSNMGKDKSGYKDVDFGDSDNENEPDAYLARLK 436
>gi|398398738|ref|XP_003852826.1| hypothetical protein MYCGRDRAFT_70653 [Zymoseptoria tritici IPO323]
gi|339472708|gb|EGP87802.1| hypothetical protein MYCGRDRAFT_70653 [Zymoseptoria tritici IPO323]
Length = 560
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 156/425 (36%), Positives = 222/425 (52%), Gaps = 42/425 (9%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHV---DDTTGAN--------------- 43
LTF V + AFE+ ++S T L GKN+V +EF + D TG N
Sbjct: 113 LTFNVRNQPAFEIPYTEISNTNLAGKNEVAVEFSLPADGDETGTNGSLGGARAKGRKMGG 172
Query: 44 EKDSLMEISFHIPNSNTQ-----------FVGDENHPPAQVFRDKIMSMADVGAGGEEAV 92
D L E+ F+IP + + +E H A +F D +MS A++G +
Sbjct: 173 ATDQLTEVRFYIPGTEKKAKNSEEGDDAEDDDEEEHNAAGLFYDTLMSKAEIGEVAGDTY 232
Query: 93 VTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTL 152
TF+ I LTPRGR+ ++++ S RL+G+ D+KI Y R FLLPK + H +VV L
Sbjct: 233 ATFQEILHLTPRGRFDIDMYESSFRLRGKTYDYKISYEHAKRFFLLPKPDDMHQLLVVGL 292
Query: 153 DPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILR 212
DPP+R+GQT YP +V+QF+ + VQ EL M++ELL TKY KL+ Y+ I V + I
Sbjct: 293 DPPLRQGQTRYPFLVMQFKREEEVQIELNMTDELLQTKYAGKLQAKYEEPIGRVVSKIFH 352
Query: 213 GLSGAKITKPG-KFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVE 271
GL+G ++ +P F S VK S+KA +G L+ LEK+F F+PKP T I ++I V
Sbjct: 353 GLTGKRLLQPSPDFVSHHQQSGVKCSIKANEGHLFCLEKAFLFVPKPATYIQFDQITSVT 412
Query: 272 FERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTD 331
R S FD+ + +++ EH F NI R E L +F K +K N D T+
Sbjct: 413 MSRVGGAVSASRTFDITVTMRS-GEHQFSNINREEQAPLENFFKIKNIKTKNEMDGDTSM 471
Query: 332 GVAAVLQEDDDDAVDPHLERIKNEAGGD---ESDEEDSDFVADKDDGGSPTDDSGEEDSD 388
VAA+ +D D V E + + G + + D DF AD D +D + E DSD
Sbjct: 472 LVAAM---NDPDLVSSDDEEVVAKDRGSADEDDESVDEDFQADSD-----SDPAEEYDSD 523
Query: 389 ASESG 393
A SG
Sbjct: 524 AKSSG 528
>gi|134075841|emb|CAL00220.1| unnamed protein product [Aspergillus niger]
Length = 570
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 133/360 (36%), Positives = 193/360 (53%), Gaps = 38/360 (10%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDD----------------TTGANEK 45
L+F V + AFE+ +++S T L GKN+V +EF + A+
Sbjct: 114 LSFNVQNRPAFEIPYSEISNTNLAGKNEVAVEFALGGEGNEPAKPAGSTKNRGRKAASGP 173
Query: 46 DSLMEISFHIPNSNTQ--------------------FVGDENHPPAQVFRDKIMSMADVG 85
D L+E+ F+IP + + E A +F + +M A++G
Sbjct: 174 DELVEMRFYIPGTAVKTEKGIKEENAENADEENGAEEEEGEEQNAANLFYEMLMDKAEIG 233
Query: 86 AGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPH 145
+ TF + LTPRGR+ ++++ S RL+G+ D+KIQY+S+ + FLLPK++ H
Sbjct: 234 DVAGDTFATFLDVLHLTPRGRFDIDMYESSFRLRGKTYDYKIQYASIKKFFLLPKNDDTH 293
Query: 146 TFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHE 205
T +V+ LDPP+R+GQT YP +V+Q + D + EL M++ELL T+YKDKLEP Y+ IH+
Sbjct: 294 TLIVLGLDPPLRQGQTRYPFLVMQLKLDEEISLELNMTDELLETRYKDKLEPRYEEPIHQ 353
Query: 206 VFTTILRGLSGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILH 264
V T I RGLSG K+ P K F S VK S+KA +G+LY L+KS F+PKP T I
Sbjct: 354 VVTKIFRGLSGKKVIMPSKDFVSHHGHSGVKCSIKANEGLLYFLDKSLIFVPKPATYIQI 413
Query: 265 EEIDYVEFERHAAGGSNMHYFDLLIRLKTE-QEHLFRNIQRNEYHNLFDFISGKGLKIMN 323
E I + R S FD+ + LK EH F NI R E L +F K ++ N
Sbjct: 414 ENIAIITMSRVGGAISASRTFDITVSLKAGLGEHQFSNINREEQQPLEEFFKAKNIRFKN 473
>gi|315044457|ref|XP_003171604.1| hypothetical protein MGYG_06145 [Arthroderma gypseum CBS 118893]
gi|311343947|gb|EFR03150.1| hypothetical protein MGYG_06145 [Arthroderma gypseum CBS 118893]
Length = 559
Score = 228 bits (581), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 131/354 (37%), Positives = 196/354 (55%), Gaps = 38/354 (10%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHV--DDTTGANE--------------- 44
L+F V + AFEV +++S T L G+N+V +EF + DD + A E
Sbjct: 191 LSFNVQNRPAFEVPYSEISNTNLAGRNEVAVEFFLPTDDASTAKEQPAGSTKNRGRKAGV 250
Query: 45 -KDSLMEISFHIPNSNTQFVGD------------------ENHPPAQVFRDKIMSMADVG 85
+D L+E+ F+IP + T+ E A +F + +M A++G
Sbjct: 251 GRDELVEMRFYIPGTVTKKEEGDEQGEGEDNKSADGEEEVEEQNAANLFYETLMDKAEIG 310
Query: 86 AGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPH 145
+ TF + LTPRGR+ ++++ S RL+G+ D+KIQY S+ + FLLPK++ H
Sbjct: 311 DVAGDTFATFLDVLHLTPRGRFDMDMYESSFRLRGKTYDYKIQYQSIKKFFLLPKNDDTH 370
Query: 146 TFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHE 205
T + + LDPP+R+GQT YP +V+Q + D + +L M++ELL ++YKDKLE Y+ IH+
Sbjct: 371 TLITLGLDPPLRQGQTRYPFLVMQLKLDDEISIDLNMTDELLQSRYKDKLEAHYEEPIHQ 430
Query: 206 VFTTILRGLSGAKITKPGKFRSAQDGYA-VKSSLKAEDGVLYPLEKSFFFLPKPPTLILH 264
V T + RGLSG K+ P + S+ G++ VK S KA +G+L+ L+KSF F+PKP T I
Sbjct: 431 VVTKVFRGLSGKKVIMPSRDFSSHHGHSGVKCSTKANEGLLFCLDKSFMFVPKPATYIQI 490
Query: 265 EEIDYVEFERHAAGGSNMHYFDLLIRLKTEQ-EHLFRNIQRNEYHNLFDFISGK 317
E I + R S FD+ + LK Q EH F NI R E L DF +
Sbjct: 491 ENISVITMSRVGGTVSASRTFDITMTLKGGQGEHQFSNINREEQQPLEDFFKAR 544
>gi|169647769|gb|ACA61886.1| CG4797 [Drosophila melanogaster]
gi|169647831|gb|ACA61917.1| SSRP1 [Drosophila melanogaster]
Length = 493
Score = 228 bits (581), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 139/353 (39%), Positives = 192/353 (54%), Gaps = 13/353 (3%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F K FEV L+ VSQ + GKN+V LEFH +D L+E+ FHIP
Sbjct: 97 VLSFDKESKTIFEVPLSHVSQC-VTGKNEVTLEFHQNDDAPVG----LLEMRFHIPA--- 148
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P F +MS A V + E++ F I I TPRGRY +++ +F +L G
Sbjct: 149 --VESAEEDPVDKFHQNVMSKASVISASGESIAIFREIQIPTPRGRYDIKIFSTFFQLHG 206
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI SV+RLF+LP + F V++LDPPI++GQT Y ++VL F D EL
Sbjct: 207 KTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLDPPIKQGQTRYHYLVLLFAPDEETTIEL 266
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
SE L KY+ KLE G ++EV +++ L G KIT PG F AV S KA
Sbjct: 267 PFSEAELRDKYEGKLEKEISGPVYEVMGKVMKVLIGRKITGPGNFIGHSGTAAVGCSFKA 326
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLE+ F ++ KPP I EEI V F R +GGS FD + LK H+F
Sbjct: 327 AAGYLYPLERGFIYIHKPPLHIRFEEISSVNFAR--SGGST-RSFDFEVTLKNGTVHIFS 383
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIK 353
+I++ EY LFD+I+ K L + N+G K+ D+++ D +L R+K
Sbjct: 384 SIEKEEYAKLFDYITQKKLHVSNMGKDKSGYKDVDFGDSDNENEPDAYLARLK 436
>gi|169647741|gb|ACA61872.1| CG4797 [Drosophila melanogaster]
gi|169647803|gb|ACA61903.1| SSRP1 [Drosophila melanogaster]
Length = 493
Score = 228 bits (580), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 139/353 (39%), Positives = 192/353 (54%), Gaps = 13/353 (3%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F K FEV L+ VSQ + GKN+V LE H +D L+E+ FHIP
Sbjct: 97 VLSFDKESKTIFEVPLSHVSQC-VTGKNEVTLESHQNDDAPVG----LLEMRFHIPA--- 148
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P F +MS A V + E++ F I ILTPRGRY +++ +F +L G
Sbjct: 149 --VESAEEDPVDKFHQNVMSKASVISASGESIAIFREIQILTPRGRYDIKIFSTFFQLHG 206
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI SV+RLF+LP + F V++LDPPI++GQT Y ++VL F D EL
Sbjct: 207 KTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLDPPIKQGQTRYHYLVLLFAPDEETTIEL 266
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
SE L KY+ KLE G ++EV +++ L G KIT PG F AV S KA
Sbjct: 267 PFSEAELRDKYEGKLEKEISGPVYEVMGKVMKVLIGRKITGPGNFIGHSGTAAVGCSFKA 326
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLE+ F ++ KPP I EEI V F R +GGS FD + LK H+F
Sbjct: 327 AAGYLYPLERGFIYIHKPPLHIRFEEISSVNFAR--SGGST-RSFDFEVTLKNGTVHIFS 383
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIK 353
+I++ EY LFD+I+ K L + N+G K+ D+++ D +L R+K
Sbjct: 384 SIEKEEYAKLFDYITQKKLHVSNMGKDKSGYKDVDFGDSDNENEPDAYLARLK 436
>gi|328711181|ref|XP_001944747.2| PREDICTED: FACT complex subunit Ssrp1-like [Acyrthosiphon pisum]
Length = 593
Score = 228 bits (580), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 134/362 (37%), Positives = 198/362 (54%), Gaps = 23/362 (6%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F +G AFE+ L +VSQ G+N+V LE+H +D T SL E+ FHIP++
Sbjct: 117 ILSFDIGNLTAFEIPLNNVSQCT-TGRNEVTLEYHQNDETPV----SLCEMRFHIPSA-- 169
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
+ GD++ P F D++M A V + +A+ F + LTPRGRY +++ +F +L G
Sbjct: 170 ELAGDQD--PVDAFHDQVMKQASVISISGDAIAIFREMQCLTPRGRYDIKVFQTFFQLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI ++V+ LF+LP + F VV+LD PI++GQT Y ++VL F + EL
Sbjct: 228 KTFDYKIPMNTVLCLFILPHKDGRQIFFVVSLDLPIKQGQTSYHYLVLLFNMEEETSIEL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
++E + KY KL G +EV +++ + KIT P F+ A+ S KA
Sbjct: 288 PFTDEEIEAKYAGKLTKEISGPTYEVLAQVMKAIVNRKITTPASFKGHSGTSAIGCSYKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G +YPLE+ FF+L KPP I EEI V F R GG + FD I LK +H F
Sbjct: 348 AAGYVYPLERGFFYLHKPPIHIRFEEIFTVNFAR---GGGSTRSFDFEIELKNGVKHTFS 404
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGD----MKTTDGVAAVLQEDDDDAVDP--HLERIKN 354
+I++ EY +L+DFI+ K L++ N G T D D D V P +L R+K
Sbjct: 405 SIEKEEYGSLYDFINAKKLRVKNTGKSDKPAYTGDNYG-----DSDKKVKPDIYLARVKR 459
Query: 355 EA 356
E
Sbjct: 460 EG 461
>gi|328771179|gb|EGF81219.1| hypothetical protein BATDEDRAFT_10843, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 502
Score = 228 bits (580), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 146/418 (34%), Positives = 231/418 (55%), Gaps = 39/418 (9%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFH--VDDTTGAN-------EKDSLMEI 51
+L+F V +K AFE+ L VS T + KN+V +EFH + + T + ++D+L+EI
Sbjct: 98 ILSFNVDKKTAFEIPLNQVSNTAVGNKNEVSIEFHPPIANATDPSPIGRSRAKEDALVEI 157
Query: 52 SFHIP-NSNTQFVGD---ENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRY 107
F++P N + Q + D E A +F D + AD+ + E++V+F + +TPR R+
Sbjct: 158 RFYLPGNISQQALYDAEGEVLTAAALFCDTVKQKADMDSILSESIVSFSELLCITPRSRF 217
Query: 108 SVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIV 167
VE+H ++ RL+G+++D+KI YS++ R+FL+PK + H +V LDPP+R+GQT YP++V
Sbjct: 218 VVEMHEAYFRLRGKSHDYKILYSAIKRMFLVPKPDDLHYMFIVGLDPPLRQGQTRYPYLV 277
Query: 168 LQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPG-KFR 226
QF + ++ +L + E ++ KY LE SY G ++EV + + +GLS K+ +++
Sbjct: 278 FQFGREEEIEIDLTLEESVIQEKYAGALEKSYDGPVYEVVSDVFKGLSKKKVIMSSLQYQ 337
Query: 227 SAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGS-NMHYF 285
SA +K S KA + +LYPL+K F +PKPP H +I V F R ++G + + F
Sbjct: 338 SANGQSGLKCSQKANEAILYPLDKCFLAIPKPPIFFSHSDITAVTFSRVSSGSTASTKTF 397
Query: 286 DLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMN-LGDMKTTDGVAAVLQEDDDDA 344
++ L T E+ F +I R EY L +F K L + N + D T +E DDD
Sbjct: 398 EVKFSLVTGVEYSFSSISREEYGPLEEFCLSKRLPVRNEIADEAVT------YRESDDDG 451
Query: 345 VDPHLERIKNEAGGDES---DEEDSDFV--ADKDDGGSPTDDSGEEDSDASESGGEKE 397
++GG EED DFV +D D G ++D D D GGE E
Sbjct: 452 ---------EKSGGRRKVSYQEEDEDFVGASDSDVGEEFSEDYQSSDGD---EGGEGE 497
>gi|169647747|gb|ACA61875.1| CG4797 [Drosophila melanogaster]
gi|169647809|gb|ACA61906.1| SSRP1 [Drosophila melanogaster]
Length = 493
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 138/353 (39%), Positives = 192/353 (54%), Gaps = 13/353 (3%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F + FEV L+ VSQ + GKN+V LEFH +D L+E+ FHIP
Sbjct: 97 VLSFDKESRTIFEVPLSHVSQC-VTGKNEVTLEFHQNDDAPVG----LLEMRFHIPA--- 148
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P F +MS A V + E++ F I ILTPRGRY +++ +F +L G
Sbjct: 149 --VESAEEDPVDKFHQNVMSKASVISASGESIAIFREIQILTPRGRYDIKIFSTFFQLHG 206
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI SV+RLF+LP + F V++LDPPI++GQT Y ++VL F D EL
Sbjct: 207 KTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLDPPIKQGQTRYHYLVLLFAPDEETTIEL 266
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
SE L KY+ KLE G ++ V +++ L G KIT PG F AV S KA
Sbjct: 267 PFSEAELRDKYEGKLEKEISGPVYGVMGKVMKVLIGRKITGPGNFIGHSGTAAVGCSFKA 326
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLE+ F ++ KPP I EEI V F R +GGS FD + LK H+F
Sbjct: 327 AAGYLYPLERGFIYIHKPPLHIRFEEISSVNFAR--SGGST-RSFDFEVTLKNGTVHIFS 383
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIK 353
+I++ EY LFD+I+ K L + N+G K+ D+++ D +L R+K
Sbjct: 384 SIEKEEYAKLFDYITQKKLHVSNMGKDKSGYKDVDFGDSDNENEPDAYLARLK 436
>gi|150865428|ref|XP_001384641.2| DNA polymerase delta binding protein [Scheffersomyces stipitis CBS
6054]
gi|149386684|gb|ABN66612.2| DNA polymerase delta binding protein [Scheffersomyces stipitis CBS
6054]
Length = 546
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 151/435 (34%), Positives = 229/435 (52%), Gaps = 41/435 (9%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPN---- 57
L F V K AFE+ +S + L GKN+V +EF++D T + D ++E+ F++P
Sbjct: 121 LVFQVNNKPAFEIPYDVISNSNLTGKNEVAIEFNLD-TAPSRAGDEMVEMRFYVPGVVEN 179
Query: 58 -SNTQFVGDENH------------------PPAQVFRDKIMSMADVGAGGEEAVVTFEGI 98
SN V DE AQ F +++ A +G EA+V+F +
Sbjct: 180 ESNKLEVKDEGENSENGEKPSTSSDSAQETSAAQAFYEQVKDRASIGQVAGEAIVSFSDV 239
Query: 99 AILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRK 158
LTPRGRY ++++ S LRL+G+ D+KIQY + R+F LPK + H +++ +DPP+R+
Sbjct: 240 LFLTPRGRYDIDMYASSLRLRGKTYDYKIQYKQIERIFSLPKPDDAHHLIILQIDPPLRQ 299
Query: 159 GQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAK 218
GQT YP +VLQF + + EL +SE+ TKYKD+L+ SY V + +GL+ +
Sbjct: 300 GQTRYPFLVLQFAREEETEVELNLSEQEYETKYKDRLKKSYDAPTQLVMSHCFKGLTERR 359
Query: 219 ITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAG 278
+ PG F+S + SLKA +G LYPL++ F F+ KP I EI + R G
Sbjct: 360 LIVPGSFQSRFLQPGISCSLKASEGYLYPLDRCFLFVTKPTIYIPFSEISNITMSRTGGG 419
Query: 279 GSNMHYFDLLIRLK-TEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVL 337
S FDL I ++ + Q H+F +I R E + ++ + KG+++ N + A+
Sbjct: 420 VSASRTFDLEINVRGSNQSHIFGSIDREEQETIENYCAEKGIRVKNEEKLAKARLAKAIN 479
Query: 338 QEDDDDAVDPHLERIKNEAGGDESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKE 397
+ DDDD D + AG D+S+ D DF GS +D + E DS+AS SG E E
Sbjct: 480 EADDDDDDDVDM----GSAGDDDSESADDDF-----QSGSDSDVAEEFDSEASLSGSEGE 530
Query: 398 -------KPAKKESK 405
+P KK+ K
Sbjct: 531 AQGEADDRPPKKKVK 545
>gi|169647781|gb|ACA61892.1| CG4797 [Drosophila melanogaster]
gi|169647843|gb|ACA61923.1| SSRP1 [Drosophila melanogaster]
Length = 493
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 139/353 (39%), Positives = 191/353 (54%), Gaps = 13/353 (3%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F K FEV L+ VSQ + GKN+V LEFH +D L+E+ F IP
Sbjct: 97 VLSFDKESKTIFEVPLSHVSQC-VTGKNEVTLEFHQNDDAPVG----LLEMRFRIPA--- 148
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P F +MS A V + E++ F I ILTPRGRY +++ +F +L G
Sbjct: 149 --VESAEEDPVDKFHQNVMSKASVISASGESIAIFREIQILTPRGRYDIKIFSTFFQLHG 206
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI SV+RLF+LP + F V +LDPPI++GQT Y ++VL F D EL
Sbjct: 207 KTFDYKIPMDSVLRLFMLPHKDSRQMFFVPSLDPPIKQGQTRYHYLVLLFAPDEETTIEL 266
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
SE L KY+ KLE G ++EV +++ L G KIT PG F AV S KA
Sbjct: 267 PFSEAELRDKYEGKLEKEISGPVYEVMGKVMKVLIGRKITGPGNFIGHSGTAAVGCSFKA 326
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLE+ F ++ KPP I EEI V F R +GGS FD + LK H+F
Sbjct: 327 AAGYLYPLERGFIYIHKPPLHIRFEEISSVNFAR--SGGST-RSFDFEVTLKNGTVHIFS 383
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIK 353
+I++ EY LFD+I+ K L + N+G K+ D+++ D +L R+K
Sbjct: 384 SIEKEEYAKLFDYITQKKLHVSNMGKDKSGYKDVDFGDSDNENEPDAYLARLK 436
>gi|322695431|gb|EFY87239.1| FACT complex subunit pob3 [Metarhizium acridum CQMa 102]
Length = 605
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 134/385 (34%), Positives = 207/385 (53%), Gaps = 33/385 (8%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHV---DDTTGAN--------------- 43
L F V K AFE+ +++ T L G+N+V +E + + TG N
Sbjct: 154 LIFSVQNKPAFELPYSEIGNTNLAGRNEVAVEMSLPQDSNDTGTNGQLGGARGKGKKAGG 213
Query: 44 EKDSLMEISFHIPNSNT----------QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVV 93
+D L+E+ F+IP + T + E A +F D ++ A++G + +
Sbjct: 214 GRDQLVEMRFYIPGTTTAKKEADGDDAEDEEAEEKNAATLFYDTLIEKAEIGETAGDTIA 273
Query: 94 TFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLD 153
TF + LTPRGR+ ++++ + RL+G+ D+KIQY S+ + +LPK ++ H + + LD
Sbjct: 274 TFLDVLHLTPRGRFDIDMYEASFRLRGKTYDYKIQYESIKKFMVLPKPDEMHCMLCIGLD 333
Query: 154 PPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRG 213
PP+R+GQT YP +V+QF+ D V +L + E L +KYKDKLEP Y+ +H V I RG
Sbjct: 334 PPLRQGQTRYPFVVMQFKKDEEVTIDLNLDESELQSKYKDKLEPHYEEPLHHVVAKIFRG 393
Query: 214 LSGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEF 272
L+ KI+ P K F + + Y +K S+KA +G LY LEK+F F+PKP T I +E+ V F
Sbjct: 394 LANKKISSPAKDFITHRSQYGIKCSIKASEGFLYCLEKAFMFVPKPATYIAYEQTQSVTF 453
Query: 273 ERHAAGGSNMHYFDLLIRLKT-EQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTD 331
R S + FD+ + +K F NI R + L F KGL++ N D
Sbjct: 454 SRVGGAVSTLSTFDITVVMKNGAGSSQFSNINREDLKALETFFKLKGLRVKNEIDEDANM 513
Query: 332 GVAAVLQEDDDDAVDPHLERIKNEA 356
AA+ ++D DD+ D E + N+A
Sbjct: 514 LAAALREQDMDDSDD---EVVANKA 535
>gi|341900759|gb|EGT56694.1| hypothetical protein CAEBREN_25379 [Caenorhabditis brenneri]
Length = 699
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 158/524 (30%), Positives = 270/524 (51%), Gaps = 35/524 (6%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQ 61
+ F K FE+ +VS KN+ +LEFH +D + + SLME+ FHIP
Sbjct: 118 IEFNWEDKPIFEIPCTNVSNVTAN-KNEAVLEFHQNDAS----QISLMEMRFHIP----- 167
Query: 62 FVGDENHP---PAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRL 118
V EN + F+ +++ A + A E+ + + TPRGRY ++++ + + L
Sbjct: 168 -VDGENEDEVDKVEEFKQAVLAFAGLEAEAEQPICLLSDVLCTTPRGRYEIKVYPTSIAL 226
Query: 119 QGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQS 178
G+ D+KI S+ RLFL+P + F V++L+PPIR+GQT Y ++++ F+ D +
Sbjct: 227 HGKTYDYKIPIKSINRLFLVPHKDARSVFFVLSLNPPIRQGQTRYSYLIMDFQKDEEQEM 286
Query: 179 ELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSL 238
EL +++E L + L+ + G I+++ + + + L K+T+PG+F AV+ S
Sbjct: 287 ELALTDEQLESS-NGTLQRTMDGPIYKIVSALFKSLCNLKVTEPGRFVGNSGTPAVQCSH 345
Query: 239 KAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHL 298
+ G LYPLEK F F+ KP I E+I R + GG+ D + LK+ +
Sbjct: 346 RQNAGFLYPLEKGFLFIHKPAMYIRFEDISSCHLAR-SDGGTVTRTVDFEVDLKSGGPII 404
Query: 299 FRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGG 358
F + + E + LFD+++ K +K+ N + G AV D DD +DP+ +K E
Sbjct: 405 FNAMDKEENNKLFDYLNKKNIKVRNPARVDGGRGAGAV---DSDDEIDPYKAAVKAEGRA 461
Query: 359 DESDEE---------DSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESS 409
+ ++ D D + S ++ S E D +SG E++ ES+ +S
Sbjct: 462 KDDSDDESTDEDYDLDQDLKRKAKEKDS-SEGSASEPDDEYDSGSEQDSSGTGESEPDSE 520
Query: 410 ----SVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPG 465
+ + K++ ++ E + KK KK KDPNAPKRA S ++ + R ++K+
Sbjct: 521 EDVPAKRQKKEKREKKEKSEKKEGKKGKKDKDPNAPKRATSAYLLWLNANRASLKEEGDS 580
Query: 466 IAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
+A DV + G++WK MS ++++ +E+K +K RY+ E+ YK
Sbjct: 581 VA--DVAKKGGQKWKTMSADDKKEWEAKYEKEKVRYEAEMKEYK 622
>gi|400597070|gb|EJP64814.1| structure-specific recognition protein [Beauveria bassiana ARSEF
2860]
Length = 563
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 122/347 (35%), Positives = 193/347 (55%), Gaps = 25/347 (7%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHV----DDTTGANEK--------DSLM 49
L F V + AFE+ A++ T L G+N+V +E + +DT AN K D L+
Sbjct: 117 LIFNVQNRPAFELPYAEIGNTNLAGRNEVAVEMSLPQDGNDTATANGKGKKAAAGRDQLV 176
Query: 50 EISFHIPNSNTQFVGDEN-----------HPPAQVFRDKIMSMADVGAGGEEAVVTFEGI 98
E+ F++P ++ + V EN A +F + +M A++G + + TF +
Sbjct: 177 EMRFYVPGTSKKEVDGENGEGSDQEQEPEKNAATLFYETLMEKAEIGEMAGDTIATFLDV 236
Query: 99 AILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRK 158
LTPRGR+ ++++ + RL+G+ D+KIQY ++ + +LPK ++ H + + LDPP+R+
Sbjct: 237 LHLTPRGRFDIDMYEASFRLRGKTYDYKIQYDAIKKFMVLPKPDEMHCMLCIGLDPPLRQ 296
Query: 159 GQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAK 218
GQT YP +V+QF+ D V +L + E L +KYKDKL+ Y+ +H V I RGL+ K
Sbjct: 297 GQTRYPFVVMQFKKDEEVIIDLSLDEATLESKYKDKLDAHYEEPLHHVVAKIFRGLANKK 356
Query: 219 ITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAA 277
I+ P K F + + Y +K S+KA +G LY LEK+F F+PKP T I +E+ + F R
Sbjct: 357 ISSPAKDFITHRSQYGIKCSIKASEGFLYCLEKAFMFVPKPATYIAYEQTQSITFSRVGG 416
Query: 278 GGSNMHYFDLLIRLK-TEQEHLFRNIQRNEYHNLFDFISGKGLKIMN 323
S + FD+ + +K F NI R + L F KGL++ N
Sbjct: 417 AVSTLSTFDITVAMKGGAGSSQFSNINREDLKALETFFKLKGLRVKN 463
>gi|296424504|ref|XP_002841788.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638036|emb|CAZ85979.1| unnamed protein product [Tuber melanosporum]
Length = 570
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 129/351 (36%), Positives = 194/351 (55%), Gaps = 31/351 (8%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGA--NEK------------DS 47
L F V K AFE+ A+VS + L GKN+V +EF D G NE D
Sbjct: 117 LYFNVANKPAFEIPFAEVSNSNLAGKNEVAVEFATADAGGGGTNEAGNKKKKKAAAQLDQ 176
Query: 48 LMEISFHIPNSNTQFVGDEN-----------HPPAQVFRDKIMSMADVGAGGEEAVVTFE 96
L+E+ F++P + + GDE A +F D + AD+G + TF
Sbjct: 177 LVEMRFYVPGTVKK--GDEEAGSDAEGEEKEMSAANLFYDTLKEKADIGEVAGDTYATFL 234
Query: 97 GIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPI 156
I LTPRGRY ++++ S RL+G+ D+KIQ+ +V + FLLPK + H +V+ LDPP+
Sbjct: 235 DILFLTPRGRYDIDMYESSFRLRGKTYDYKIQFENVKKFFLLPKPDDVHNMIVIGLDPPL 294
Query: 157 RKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSG 216
R+GQT YP +V+QF+ + ++ +L ++E+LLN +Y KL+ Y+ H+V + I +GL+G
Sbjct: 295 RQGQTKYPFLVMQFKREEDMEFDLNITEDLLNERYAGKLQMHYENPAHQVVSQIFKGLTG 354
Query: 217 AKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERH 275
+I P + F S VK SLKA +G L+ L+K+F F+PKP I ++I ++ R
Sbjct: 355 KRIITPSRDFSSHHQQSGVKCSLKANEGHLFCLDKAFIFVPKPAVFITFDKIAHITMSRV 414
Query: 276 AAGGSNMHYFDLLIRLKTEQ---EHLFRNIQRNEYHNLFDFISGKGLKIMN 323
S FD+ + LK+ + E+ F NI R E +L DF K L+I N
Sbjct: 415 GGSVSASRTFDVTVSLKSSEGGGEYQFNNINREEQSSLEDFFKSKNLRIKN 465
>gi|340518432|gb|EGR48673.1| predicted protein [Trichoderma reesei QM6a]
Length = 574
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 134/385 (34%), Positives = 209/385 (54%), Gaps = 36/385 (9%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHV---DDTTGANEK------------- 45
+ F V + AFE+ +++ T L G+N+V +E + + TG N +
Sbjct: 117 IVFNVQNRPAFELPYSEIGNTNLAGRNEVAVELALPVNANDTGTNGQLGGARGKGKKAGA 176
Query: 46 --DSLMEISFHIPNSNT--QFVGD--------ENHPPAQVFRDKIMSMADVGAGGEEAVV 93
D L+E+ F+IP + T + GD E A F + ++ A++G + +
Sbjct: 177 GKDQLVEMRFYIPGTTTKKETEGDDAGSDGEEEEQNAATFFYETLIEKAEIGETAGDTIA 236
Query: 94 TFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLD 153
TF + LTPRGR+ ++++ + RL+G+ D+KIQY +V + +LPK + H + + LD
Sbjct: 237 TFLDVLHLTPRGRFDIDMYEASFRLRGKTYDYKIQYEAVKKFMVLPKPDDMHCLLCIGLD 296
Query: 154 PPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRG 213
PP+R+GQT YP +V+QF+ D V +L + EE L TKYKDKLE Y+ +H V I RG
Sbjct: 297 PPLRQGQTRYPFVVMQFKKDEEVTIDLNIDEEELQTKYKDKLEAHYEEPLHHVVAKIFRG 356
Query: 214 LSGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEF 272
L KI+ P K F + ++ Y +K S+KA +G LY LEK+F F+PKP T I +E+ V F
Sbjct: 357 LGNKKISSPAKDFLTHRNQYGIKCSIKASEGFLYCLEKAFMFVPKPATYIAYEQTQSVTF 416
Query: 273 ERHAAGGSNMHYFDLLIRLKT-EQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTD 331
R + S + FD+ + +K F NI R + L F KGL++ N D + +
Sbjct: 417 SRVSGAVSALSTFDITVVMKNGAGSSQFSNINREDLKALESFFKLKGLRVKNEID-EDAN 475
Query: 332 GVAAVLQED-----DDDAVDPHLER 351
+AA L+E+ DD+ V P +R
Sbjct: 476 LLAAALREEAMDDSDDEVVVPKADR 500
>gi|358380030|gb|EHK17709.1| hypothetical protein TRIVIDRAFT_82979 [Trichoderma virens Gv29-8]
Length = 570
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 133/386 (34%), Positives = 210/386 (54%), Gaps = 37/386 (9%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHV---DDTTGAN--------------- 43
+ F V + AFE+ +++ T L G+N+V +E + + TG N
Sbjct: 117 IVFNVQNRPAFEMPYSEIGNTNLAGRNEVAVELALPLNANDTGTNGQLGGARGKGKKAGA 176
Query: 44 EKDSLMEISFHIPNSNTQF----------VGDENHP-PAQVFRDKIMSMADVGAGGEEAV 92
KD L+E+ F+IP T+ G+E A +F + ++ A++G + +
Sbjct: 177 GKDQLVEMRFYIPGVTTKKETEGEDAGSDAGEEEEKNAATLFYETLIEKAEIGETAGDTI 236
Query: 93 VTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTL 152
TF + LTPRGR+ ++++ + RL+G+ D+KIQY +V + +LPK ++ H + + L
Sbjct: 237 ATFLDVLHLTPRGRFDIDMYEASFRLRGKTYDYKIQYEAVKKFMVLPKPDEMHCLLCIGL 296
Query: 153 DPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILR 212
DPP+R+GQT YP +V+QF+ D V +L + E L +KYKDKLEP Y+ +H V I R
Sbjct: 297 DPPLRQGQTRYPFVVMQFKKDEEVTIDLNIDEAELESKYKDKLEPHYEEPLHHVVAKIFR 356
Query: 213 GLSGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVE 271
GL KI+ P K F + ++ Y +K S+KA +G LY LEK+F F+PKP T I +E+ V
Sbjct: 357 GLGNKKISSPAKDFLTHRNQYGIKCSIKASEGFLYCLEKAFMFVPKPATYIAYEQTQSVT 416
Query: 272 FERHAAGGSNMHYFDLLIRLKT-EQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTT 330
F R + S + FD+ + +K F NI R + L F KGL++ N D +
Sbjct: 417 FSRVSGAVSALSTFDITVVMKNGAGSSQFSNINREDLKALESFFKLKGLRVKNEID-EDA 475
Query: 331 DGVAAVLQED-----DDDAVDPHLER 351
+ +AA L+E+ DD+ V P +R
Sbjct: 476 NLLAAALREEAMDESDDEVVAPKADR 501
>gi|195586162|ref|XP_002082847.1| GD25013 [Drosophila simulans]
gi|194194856|gb|EDX08432.1| GD25013 [Drosophila simulans]
Length = 689
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 132/319 (41%), Positives = 177/319 (55%), Gaps = 13/319 (4%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F K FEV L+ VSQ + GKN+V LEFH +D L+E+ FHIP
Sbjct: 118 VLSFDKESKTIFEVPLSHVSQC-VTGKNEVTLEFHQNDDAPVG----LLEMRFHIPA--- 169
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
V P F +MS A V + E++ F I ILTPRGRY +++ +F +L G
Sbjct: 170 --VESAEEDPVDKFHQNVMSKASVISASGESIAIFREIQILTPRGRYDIKIFSTFFQLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI SV+RLF+LP + F V++LDPPI++GQT Y ++VL F D EL
Sbjct: 228 KTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLDPPIKQGQTRYHYLVLLFAPDEETTIEL 287
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
SE L KY+ KLE G ++EV +++ L G KIT PG F AV S KA
Sbjct: 288 PFSEAELRDKYEGKLEKEISGPVYEVMGKVMKVLIGRKITGPGNFIGHSGTAAVGCSFKA 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G LYPLE+ F ++ KPP I EEI V F R +GGS FD + LK H+F
Sbjct: 348 AAGYLYPLERGFIYIHKPPLHIRFEEISSVNFAR--SGGST-RSFDFEVTLKNGTVHIFS 404
Query: 301 NIQRNEYHNLFDFISGKGL 319
+I++ EY LFD+I+ K L
Sbjct: 405 SIEKEEYAKLFDYITQKKL 423
>gi|384491091|gb|EIE82287.1| hypothetical protein RO3G_06992 [Rhizopus delemar RA 99-880]
Length = 541
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 123/338 (36%), Positives = 185/338 (54%), Gaps = 19/338 (5%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVD------DTTGANEKDSLMEISFHI 55
L F VG K FE+ LA T GKN+V + F VD D E D LM+ +F++
Sbjct: 118 LNFTVGNKMMFELPLAQAIATNKPGKNEVAINF-VDPGQPAPDGINPKEVDELMDCTFYV 176
Query: 56 PNSNTQFVGDENHPPA------------QVFRDKIMSMADVGAGGEEAVVTFEGIAILTP 103
P + + E++ VF + + S + E +V F+ I LTP
Sbjct: 177 PGTVAKETTTEDNSGGEQEDEEEEVNADMVFYETVKSKLEFSQMTTENIVQFQEILSLTP 236
Query: 104 RGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLY 163
RGRY+++++ FLRL+G+ D+KI YS++V+LFLL K + H V+ LDPP+R+GQT Y
Sbjct: 237 RGRYNIDMYQDFLRLRGKTYDYKILYSNIVQLFLLLKPDDVHVLFVIGLDPPLRQGQTKY 296
Query: 164 PHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPG 223
P +V QF + + +L + + +L KY++KL+ Y +EV + + R L+G K+
Sbjct: 297 PFLVFQFVREEEIDVDLNLEDSVLEEKYENKLQKHYDAPTYEVVSNVFRALTGRKVISTS 356
Query: 224 KFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMH 283
+RS YA+K S+KA +G LYPLEKS F+PKPPT I EI V F R +
Sbjct: 357 TYRSHHGAYAMKCSMKANEGFLYPLEKSLLFIPKPPTFIPINEIGVVTFSRVGQSSGSSR 416
Query: 284 YFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKI 321
FD+ R+ + + F +I R EY N+ D++ + +KI
Sbjct: 417 TFDMKFRMTSGTDIQFSSINREEYANIEDYLKQRKIKI 454
>gi|448512948|ref|XP_003866846.1| Pob3 protein [Candida orthopsilosis Co 90-125]
gi|380351184|emb|CCG21407.1| Pob3 protein [Candida orthopsilosis Co 90-125]
Length = 544
Score = 224 bits (571), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 153/428 (35%), Positives = 233/428 (54%), Gaps = 38/428 (8%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEK--DSLMEISFHIPNSN 59
L F V K +FE+ +S + L GKN+V +E ++D + N+K D ++E+ F++P +
Sbjct: 125 LVFNVNNKPSFEIPYDAISNSNLTGKNEVAIELNLDRS---NKKMGDEVVEMRFYVPGTT 181
Query: 60 ----TQFVGDEN--------------HPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAIL 101
T V +E+ AQ F +++ AD+G EA+V+F L
Sbjct: 182 IEQETTTVKNEDGEEEEVVSTNIDTEQSAAQTFYEQLKDKADIGQIAGEAIVSFGDALFL 241
Query: 102 TPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQT 161
TPRGRY ++++ + LRL+G+ D+KIQY + R+F LPK ++ H +++ +DPP+R+GQT
Sbjct: 242 TPRGRYDIDMYSNSLRLRGKTYDYKIQYDQIERIFSLPKPDEVHHLIILQIDPPLRQGQT 301
Query: 162 LYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITK 221
YP +VLQF D + EL +S+E KYK++L+ +Y H V LRGL+ K+
Sbjct: 302 RYPFLVLQFVKDEETELELNLSDEEFEEKYKNRLKKTYDAPTHIVMAHCLRGLTEKKLVI 361
Query: 222 PGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSN 281
PG F+S + S+KA +G LYPLE+ F F+ KP I + EI V R G S
Sbjct: 362 PGAFQSRFLQPGISCSVKASEGYLYPLERCFLFVTKPTLYIPYSEISNVGLSRAGGGVSA 421
Query: 282 MHYFDLLIR-LKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQED 340
FDL I + + +H+F +I R E N+ F GKG+++ N + A+ QE
Sbjct: 422 SRTFDLEINIIGSTVKHVFGSIDREEQENIEKFCVGKGIRVKNEEKIAKQRLAKALEQEA 481
Query: 341 DDDAVDPHLERIKNEAGGDESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKE--- 397
D DA D + + GD+ ++ED DF GS +D + E DSDA+ES G++E
Sbjct: 482 DMDADD---NDVDMGSAGDDDEDEDDDF-----QSGSDSDVAEEFDSDAAESSGDEEGEG 533
Query: 398 ---KPAKK 402
PAKK
Sbjct: 534 DDRPPAKK 541
>gi|358399200|gb|EHK48543.1| hypothetical protein TRIATDRAFT_305357 [Trichoderma atroviride IMI
206040]
Length = 568
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 129/376 (34%), Positives = 204/376 (54%), Gaps = 31/376 (8%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHV---DDTTGANEK------------- 45
+TF V + AFE+ +++ T L G+N+V LE + + TG N +
Sbjct: 117 ITFNVQNRPAFELPYSEIGNTNLAGRNEVALELSLPLNANDTGTNGQLGGARGKGKKAGA 176
Query: 46 --DSLMEISFHIPNSNTQFVGD-----------ENHPPAQVFRDKIMSMADVGAGGEEAV 92
D L+E+ F+IP T+ + E A +F + ++ A++G + +
Sbjct: 177 GKDQLVEMRFYIPGVTTKKETEGEDAGSDGGEEEEKNAATLFYETLIEKAEIGETAGDTI 236
Query: 93 VTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTL 152
TF + LTPRGR+ ++++ + RL+G+ D+KIQY +V + +LPK ++ H +V+ L
Sbjct: 237 ATFLDVLHLTPRGRFDIDMYEASFRLRGKTYDYKIQYEAVKKFMVLPKPDEMHCLLVIGL 296
Query: 153 DPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILR 212
DPP+R+GQT YP +V+QF+ D V +L + E L +KYKDKLEP Y+ +H V + R
Sbjct: 297 DPPLRQGQTRYPFVVMQFKKDEEVTIDLNIEEAELESKYKDKLEPHYEEPLHHVVAKMFR 356
Query: 213 GLSGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVE 271
GL KI+ P K F + ++ Y +K ++KA +G LY LEK+F F+PKP T I +E+ V
Sbjct: 357 GLGNKKISSPAKDFLTHRNQYGIKCAIKASEGFLYCLEKAFMFVPKPATYIAYEQTQSVT 416
Query: 272 FERHAAGGSNMHYFDLLIRLKT-EQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTT 330
F R + S + FD+ + +K F NI R + L F KGL++ N D
Sbjct: 417 FSRVSGAVSALSTFDITVVMKNGAGSSQFSNINREDLKALESFFKLKGLRVKNEIDEDAN 476
Query: 331 DGVAAVLQEDDDDAVD 346
AA+ +E DD+ D
Sbjct: 477 LLAAALREEAMDDSDD 492
>gi|302891995|ref|XP_003044879.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256725804|gb|EEU39166.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 558
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 130/372 (34%), Positives = 202/372 (54%), Gaps = 38/372 (10%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDT---TGANE-------------- 44
LTF V + AFE++ ++++ T L G+N+V +E + T +GAN
Sbjct: 118 LTFSVQNRPAFELAYSEIANTNLAGRNEVAVEMSLPATAADSGANPSLGGARSKGSKAAA 177
Query: 45 -KDSLMEISFHIPNSNTQ------------FVGDENHPPAQVFRDKIMSMADVGAGGEEA 91
+D L+E+ F+IP T+ +E A +F + ++ A++G +
Sbjct: 178 GRDQLVEMRFYIPGVTTRKEAEGEDAGSDAGNAEEEKNAATLFYETLIDKAEIGETAGDT 237
Query: 92 VVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVT 151
+ TF + LTPRGR+ ++++ + RL+G+ D+KIQY ++ + +LPK ++ H +V+
Sbjct: 238 IATFLDVLHLTPRGRFDIDMYEASFRLRGKTYDYKIQYDAIKKFMVLPKPDEVHYMLVIG 297
Query: 152 LDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTIL 211
LDPP+R+GQT YP +V+QF+ D V +L ++EE L KY+DKLEP Y+ +H+V I
Sbjct: 298 LDPPLRQGQTRYPFVVMQFKKDEEVTIDLNLNEEELKKKYQDKLEPHYEEPLHQVVAKIF 357
Query: 212 RGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVE 271
RGL KI S ++ Y +K S+KA +G LY LEK+F F+PKP T I +E+ V
Sbjct: 358 RGLGNKKI-------SHRNQYGIKCSIKASEGSLYCLEKAFMFVPKPATYIAYEQTQSVT 410
Query: 272 FERHAAGGSNMHYFDLLIRLKT-EQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTT 330
F R S + FD+ + LK F NI R + L F KGL++ N D
Sbjct: 411 FSRVGGAVSALSTFDITVLLKNGAGSSQFSNISREDLKALETFFKLKGLRVKNEIDEDAN 470
Query: 331 DGVAAVLQEDDD 342
AA+ QE DD
Sbjct: 471 LLAAALDQEMDD 482
>gi|66803987|ref|XP_635805.1| structure-specific recognition protein 1 [Dictyostelium discoideum
AX4]
gi|74851853|sp|Q54G78.1|SSRP1_DICDI RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=Structure-specific recognition protein
gi|60464131|gb|EAL62292.1| structure-specific recognition protein 1 [Dictyostelium discoideum
AX4]
Length = 527
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 132/359 (36%), Positives = 201/359 (55%), Gaps = 37/359 (10%)
Query: 9 KQAFEVSLADVSQTQL--QGKNDVILEFHVDDTTGANEKDSLMEISFHIP---------- 56
K FE +++VSQ+ + KN++ LEFH D ++ ++++E+ F P
Sbjct: 132 KVGFEFPISEVSQSVIGANNKNELTLEFHHDKAMD-DDDETMVEMRFFTPIRPSKEGEEG 190
Query: 57 --------------NSNTQFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILT 102
+E + F+ IM+ +D+ + +++V F I LT
Sbjct: 191 GKEKKVGEDGEEDEEDEEDAEKEEEISALEQFQQTIMNKSDMVSNVGKSLVVFSAIQFLT 250
Query: 103 PRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTL 162
PRGR +E++ +FL+L G+ +D+K+ Y S+ RLF + +Q H F +++LDPPIR+GQT
Sbjct: 251 PRGRIDIEMYPTFLKLHGKTHDYKVPYESISRLFQFFRPDQKHIFFIISLDPPIRQGQTK 310
Query: 163 YPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKP 222
Y H+V+QF+ + + EL +++E L K+KD+L P G + + IL+ L+G KIT P
Sbjct: 311 YAHLVIQFQAEENIHLELNLTDE-LQQKFKDQLSPIMNGNANALICKILKALTGKKITIP 369
Query: 223 GKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAA----G 278
G F+S ++K SLKA +G LYPLE+ FFF+ KPPT I E+I +EF R+ A G
Sbjct: 370 GNFQSDSGANSIKCSLKANEGYLYPLERCFFFVHKPPTYIKFEDISNIEFARYGAPSVRG 429
Query: 279 GSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVL 337
GSN FDL I LK F NIQR EY +LF+F+ K L I+N T G A ++
Sbjct: 430 GSN-RTFDLSINLKNSTSIQFVNIQREEYPSLFNFLKEKKLSILN----PVTTGPAMII 483
>gi|227202642|dbj|BAH56794.1| AT3G28730 [Arabidopsis thaliana]
Length = 268
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 114/153 (74%), Positives = 126/153 (82%), Gaps = 5/153 (3%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQ 61
LTF+VG KQAFEVSLADVSQTQLQGKNDV LEFHVDDT GANEKDSLMEISFHIPNSNTQ
Sbjct: 119 LTFLVGSKQAFEVSLADVSQTQLQGKNDVTLEFHVDDTAGANEKDSLMEISFHIPNSNTQ 178
Query: 62 FVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQ 121
FVGDEN PP+QVF D I++MADV G E+AVVTFE IAILTPRGRY+VELHLSFLRLQGQ
Sbjct: 179 FVGDENRPPSQVFNDTIVAMADVSPGVEDAVVTFESIAILTPRGRYNVELHLSFLRLQGQ 238
Query: 122 ANDFKIQYSSVVRLFLLP--KSNQPHTFVVVTL 152
A K SS V L + +S HT ++++L
Sbjct: 239 AMTLK---SSTVALSVCSCFQSQTNHTRLLLSL 268
>gi|154279964|ref|XP_001540795.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150412738|gb|EDN08125.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 571
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 135/379 (35%), Positives = 205/379 (54%), Gaps = 39/379 (10%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFH-----VDDTTGANE------------ 44
L F V + AFE+ +++S T L GKN+V +EF V T G +E
Sbjct: 112 LAFNVQNRPAFEIPYSEISNTNLAGKNEVAVEFSLPADGVSGTNGQSEGSTKNRGRKAGA 171
Query: 45 -KDSLMEISFHIPNS-----NTQFVGDEN---------HPPAQVFRDKIMSMADVGAGGE 89
+D L+E+ F+IP + + DEN A +F + +M A++G
Sbjct: 172 GRDELVEMRFYIPGTALKKEKPEGEEDENGVDGEEAEEQNAANLFYETLMDKAEIGDVAG 231
Query: 90 EAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVV 149
+ TF + LTPRGR+ ++++ S RL+G+ D+KIQY S+ + FLLPK++ HT +
Sbjct: 232 DTFATFLDVLHLTPRGRFDIDMYESSFRLRGKTYDYKIQYQSIKKFFLLPKNDDTHTLIT 291
Query: 150 VTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTT 209
+ LDPP+R+GQT YP +V+Q + D + +L M++ELL T+YKDKLE Y+ IH+V T
Sbjct: 292 LGLDPPLRQGQTRYPFLVMQLKLDDEISIDLNMTDELLQTRYKDKLEAHYEEPIHQVVTK 351
Query: 210 ILRGLSGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEID 268
+ RGLSG K+ P + F S VK S+KA +G+L+ L+KSF F+PKP T + E I
Sbjct: 352 VFRGLSGKKVVMPSRDFVSHHGHSGVKCSIKANEGLLFCLDKSFMFVPKPATYVQIENIS 411
Query: 269 YVEFERHAAGGSNMHYFDLLIRLKTEQ-EHLFRNIQRNEYHN----LF-DFISGKGLKIM 322
+ R S FD+ + LK EH F NI R ++ +F +F K ++
Sbjct: 412 VITMSRVGGAISASRTFDITMTLKGGMGEHQFSNINRYKHSTTQAPVFEEFFKAKNIRFK 471
Query: 323 NLGDMKTTDGVAAVLQEDD 341
N ++ +AA L D+
Sbjct: 472 NEMADDSSALIAAALDNDE 490
>gi|344303122|gb|EGW33396.1| hypothetical protein SPAPADRAFT_66363 [Spathaspora passalidarum
NRRL Y-27907]
Length = 540
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 148/443 (33%), Positives = 231/443 (52%), Gaps = 66/443 (14%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEK-DSLMEISFHIPNSNT 60
L F V K AFE++ ++ + L GKN+V +EF++D GAN+ D ++E+ F++P +
Sbjct: 124 LVFQVSNKPAFEITYDSINNSNLTGKNEVAIEFNLDG--GANKAGDEVVEMRFYVPGT-- 179
Query: 61 QFVGDENHPP---------------------AQVFRDKIMSMADVGAGGEEAVVTFEGIA 99
V +E P AQVF +++ A +G EA+V+F +
Sbjct: 180 --VENEKKTPPKKEEGEEKVDEEPEVNEISAAQVFYEQLRDKASIGQVAGEAIVSFGDVL 237
Query: 100 ILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKG 159
LTPRGRY ++++ + LRL+G+ D+KIQY + R+F LPK ++ H +++ +DPP+R+G
Sbjct: 238 FLTPRGRYDIDMYPTSLRLRGKTYDYKIQYDQIDRIFSLPKPDETHHLIILQIDPPLRQG 297
Query: 160 QTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKI 219
QT YP +VLQF + + EL +S+E N KY+D+L+ SY H V + RGL+ K+
Sbjct: 298 QTRYPFLVLQFAREEETELELNLSDEEFNAKYQDRLKKSYDAPTHVVASHCFRGLTERKL 357
Query: 220 TKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGG 279
PG F+S V SLKA +G L+PL++ F F+ KP I EI V R GG
Sbjct: 358 VTPGSFQSRFLQPGVSCSLKASEGYLFPLDRCFLFVTKPTIYIPFTEISDVTMSR--TGG 415
Query: 280 SNMHYFDLLIRLK-TEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQ 338
S FDL I ++ + Q H+F +I + E + F + KG+++ N
Sbjct: 416 SRT--FDLEINVRGSNQSHVFGSIDKEEQETIERFCAEKGIRVKN--------------- 458
Query: 339 EDDDDAVDPHLERIKNEAGGDESDEEDSDFVADKD----------DGGSPTDDSGEEDSD 388
++ L + E DESD+ED D + + GS +D + E DS+
Sbjct: 459 --EEKIAKAMLAKAIKEGAADESDDEDVDMGSAGEDDEESADDDFQSGSESDVAEEFDSE 516
Query: 389 ASESGGEK------EKPAKKESK 405
AS S E ++P KK++K
Sbjct: 517 ASASDSEMSDAEKDDRPPKKKAK 539
>gi|17507971|ref|NP_491688.1| Protein HMG-3 [Caenorhabditis elegans]
gi|74956084|sp|O01683.1|SSP1B_CAEEL RecName: Full=FACT complex subunit ssrp1-B; AltName:
Full=Facilitates chromatin transcription complex subunit
ssrp1-B; AltName: Full=HMG box-containing protein 3;
AltName: Full=Structure-specific recognition protein 1-B
gi|351065896|emb|CCD61910.1| Protein HMG-3 [Caenorhabditis elegans]
Length = 689
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 157/518 (30%), Positives = 262/518 (50%), Gaps = 38/518 (7%)
Query: 12 FEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFVGDENHPPA 71
FE+ +VS + KN+ ILEFH ++ + K LME+ FH+P +E+
Sbjct: 128 FEIPCTNVSNV-IANKNEAILEFHQNEQS----KVQLMEMRFHMP---VDLENEEDTDKV 179
Query: 72 QVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSS 131
+ F+ +++ A + A E+ + I TPRGRY ++++ + + L G+ D+KI +
Sbjct: 180 EEFKKAVLAYAGLEAETEQPICLLTDILCTTPRGRYDIKVYPTSIALHGKTYDYKIPVKT 239
Query: 132 VVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKY 191
+ RLFL+P + + V++L+PPIR+GQT Y +++ +F D EL +++E L+ +
Sbjct: 240 INRLFLVPHKDGRQVYFVLSLNPPIRQGQTHYSYLIFEFGKDEEEDLELSLTDEQLDY-F 298
Query: 192 KDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKS 251
L+ G I+E + + + + K+T PG+F + A++ + + G+LYP+EK
Sbjct: 299 NGNLQREMTGPIYETISILFKSICNLKVTVPGRFLGSSGTPAIQCTHRQNLGLLYPMEKG 358
Query: 252 FFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLF 311
F F+ KP I EEI F R + G+ FD I LKT F + + E + LF
Sbjct: 359 FLFIQKPVMYIRFEEISSCHFAR-SDSGTVTRTFDFEIDLKTGSSLTFSAMDKEENNKLF 417
Query: 312 DFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDESDEE------- 364
D+++ K +KI N D +A D+D +DP+ +K E G E D++
Sbjct: 418 DYLNKKEIKIRN---SHRIDNKSAGYGSSDEDDIDPYKSTVKAE--GREQDDDSDDESTD 472
Query: 365 -----DSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSSV-------- 411
D D K+D S ++ SG E D +SG EK+ ES + ++
Sbjct: 473 EDYDLDKDMKKQKNDKDS-SEGSGSEPDDEYDSGSEKDASGTGESDPDEENIEPKKKESK 531
Query: 412 KASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDV 471
+ ++K ++ KK KK KDPN PKRA + +I + R ++K+ G DV
Sbjct: 532 EKKNKREKKEKPVKEKAVKKGKKTKDPNEPKRATTAYIIWFNANRNSMKED--GDTLGDV 589
Query: 472 GRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
+ G +WK MS ++++ + KA DK RY+ E+ YK
Sbjct: 590 AKKAGAKWKSMSADDKKEWNDKAAQDKARYEAEMKEYK 627
>gi|323450291|gb|EGB06173.1| hypothetical protein AURANDRAFT_72060 [Aureococcus anophagefferens]
Length = 667
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 174/529 (32%), Positives = 274/529 (51%), Gaps = 35/529 (6%)
Query: 9 KQAFEVSLADVSQTQLQG--------KNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
K+ F++ L+ VSQ L + +V ++F D A + L+E+ +IP +
Sbjct: 129 KRLFDIDLSKVSQCVLPAGVGKQAGEQKEVTMQF---DDKAAPDDHQLVELRLYIPPGSR 185
Query: 61 QFVGDENHPPAQV-----FRDKIMSMADVGA--GGEEAVVTFEGIAILTPRGRYSVELHL 113
+ DE KIM + + + G + A E A L PRGRY+VE++
Sbjct: 186 SYAEDEEEDDDDAGEAARVHAKIMEYSKLTSVTGTQLAQFGAEDGAFLLPRGRYAVEMYG 245
Query: 114 SFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFET- 172
F R+ G D+KI ++ V R LLP+++ H ++ LD PIR+GQ Y H+V Q +
Sbjct: 246 DFFRMHGNMYDYKINFADVERFILLPRTDDVHYAFIIALDKPIRQGQQRYGHLVWQLKKG 305
Query: 173 DYVVQSELLMSEELLNTKYK--DKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQD 230
D + L SE L+ +Y L+P G ++++ + + LSG K+ GKFRS D
Sbjct: 306 DKAITVNL--SEAELSERYGAGSGLKPELAGPLYQLVARVFKVLSGKKVFTTGKFRSNDD 363
Query: 231 GYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAA--GGSNMHYFDLL 288
+AV S+KA G LYPLE+SF F+ KP ++ E++ VEFER + GS FDL
Sbjct: 364 RHAVNCSVKASTGQLYPLERSFVFVHKPTLVLRFEDVASVEFERFSGYGQGSATKNFDLK 423
Query: 289 IRLKT-----EQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDD 343
+ +++ ++H F +I+R EY L +F++ KGLKI NL + AA
Sbjct: 424 VSMRSVGGDPPKDHSFTSIERAEYKPLLEFLTSKGLKIRNLQETAARATNAAKEALGIGS 483
Query: 344 AVDPHLERIKNEAGGDESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEK---EKPA 400
D + GGD +DE+ D D +D G+P D ++D D G E P
Sbjct: 484 DDDDDDDAAPAARGGDSNDEDSPD--EDYEDAGAPASDDDDDDDDDDGDGDGSDDDEAPK 541
Query: 401 KKESKKESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIK 460
+ K+ ++ + K+K+ E + KK++KKKDPNAPK S +I F +R +K
Sbjct: 542 IAKKPKKEAAAEPKPKKRKAEPKKEKAEPKKKRKKKDPNAPKGKSSAYIMFGNAKRAEVK 601
Query: 461 KSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
+ +P + D+GR LG+RWK+++ ++++PY A AD +RY E++ YK
Sbjct: 602 EQHPDFSLGDIGRELGKRWKELTDDDKKPYVDLATADAERYDREMAAYK 650
>gi|260949365|ref|XP_002618979.1| hypothetical protein CLUG_00138 [Clavispora lusitaniae ATCC 42720]
gi|238846551|gb|EEQ36015.1| hypothetical protein CLUG_00138 [Clavispora lusitaniae ATCC 42720]
Length = 538
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 145/418 (34%), Positives = 228/418 (54%), Gaps = 28/418 (6%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIP----N 57
L F + K FE+ ++++ + L GKN+V +E ++ + A D L+E+ F+IP N
Sbjct: 121 LVFQIHNKPDFEIPYSEIANSNLTGKNEVAIEMNLTNEDKAG--DELVEMRFYIPGTVEN 178
Query: 58 SNTQFVGDENHP-----------PAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGR 106
+ V +E+ A VF D++ AD+G EA+V+F + LTPRGR
Sbjct: 179 ETKKTVKNEDGSEKVEEETEEVNAAAVFYDQLKDKADIGQVAGEAIVSFSDVLFLTPRGR 238
Query: 107 YSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHI 166
Y ++++ + LRL+G+ D+KIQY + R+F LPK + H +V+ +DPP+R+GQT YP +
Sbjct: 239 YDIDMYPTSLRLRGKTYDYKIQYKQIERIFSLPKPDDVHHLIVLQIDPPLRQGQTRYPFL 298
Query: 167 VLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFR 226
VLQF + + EL +++++ ++KYKD+L+ +Y H V + L+GL+ ++ PG F+
Sbjct: 299 VLQFSREEETELELNLADDVYDSKYKDRLKKTYDSQTHIVMSQCLKGLTERRLIVPGSFQ 358
Query: 227 SAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFD 286
S V SLKA +G LYPL++ F F+ KP I + E+ V R + G S FD
Sbjct: 359 SRFLQAGVSCSLKASEGYLYPLDRCFLFVTKPTVYIPYSEVSTVTMSRTSTGVSASRTFD 418
Query: 287 LLIRLK-TEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAV 345
L + L+ Q H+F NI + E + + KGL+I N + K + A DDD
Sbjct: 419 LEVNLRGGNQSHVFANIDKEEQETIERYCQEKGLRIKN--EEKIAKAMLAKAMTGDDDDD 476
Query: 346 DPHLERIKNEAGGDESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKE 403
D + AG +ESD D DF GS +D + E DS+AS S ++E + E
Sbjct: 477 DDADVDM-GSAGEEESD--DDDF-----GSGSESDVAEEFDSNASASDSDEEMASGGE 526
>gi|449019281|dbj|BAM82683.1| probable structure specific recognition protein, recombination
signal sequence recognition protein, chromatin-specific
transcription elongation factor [Cyanidioschyzon merolae
strain 10D]
Length = 583
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 118/324 (36%), Positives = 189/324 (58%), Gaps = 16/324 (4%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQ 61
+ F+ G + AFE+ ++D+SQ G+N++ LEFH+DDT G + + L+E+ F P
Sbjct: 121 VLFVSGSETAFELPISDISQVVRSGRNELALEFHLDDTAGKTD-ECLVEMRFQAPTEEDA 179
Query: 62 FVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQ 121
+ A+V M E++V FE + + PRGRY +EL ++L + G+
Sbjct: 180 -IALHAELSARVGSASFMG---------ESLVFFEELPFIVPRGRYDLELFPTYLSMHGK 229
Query: 122 ANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFET-DYVVQSEL 180
+ D+KI Y +V R+FLLPK ++ H +V++LDPPIR+G T YPH+VLQ D ++ L
Sbjct: 230 SFDYKILYKTVRRMFLLPKPDEIHLALVISLDPPIRQGNTTYPHLVLQLRRDDDEIEVAL 289
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
M E L +Y DKL P G + +V T +LR L + P F ++Q +A++++L A
Sbjct: 290 NMKPEELQKRYGDKLPPKISGELWQVVTKVLRVLVDKPLHAPKNFVTSQGAHALRTALGA 349
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
DG LYPLE FFF+ KPPT + +E++D+VEF+R FDL + + LF
Sbjct: 350 NDGYLYPLENCFFFVNKPPTYLRYEDVDFVEFKRLEMD----RRFDLQVVMLNGSTLLFT 405
Query: 301 NIQRNEYHNLFDFISGKGLKIMNL 324
N++R+E+ L+ F+ K ++++ +
Sbjct: 406 NLERSEFSTLYQFLESKQVRMVGI 429
>gi|330804649|ref|XP_003290305.1| hypothetical protein DICPUDRAFT_95110 [Dictyostelium purpureum]
gi|325079592|gb|EGC33185.1| hypothetical protein DICPUDRAFT_95110 [Dictyostelium purpureum]
Length = 537
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 131/353 (37%), Positives = 201/353 (56%), Gaps = 42/353 (11%)
Query: 9 KQAFEVSLADVSQTQLQ--GKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFVGDE 66
K FE +++VSQ+ + KN++ LEFH D+T ++ +S++E+ F P + +
Sbjct: 131 KIGFEFPISEVSQSVINQNNKNELTLEFHHDNTLDFDD-ESIVEMRFFAPTRPVKEDEQK 189
Query: 67 NH-------------------------------PPAQVFRDKIMSMADVGAGGEEAVVTF 95
P ++F+ IM+ +D+ + +++V F
Sbjct: 190 EKKEKEKKEGQEGENEDEEEEEEEDEEDEDEELTPIEIFQQTIMNKSDMVSNVGKSLVVF 249
Query: 96 EGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPP 155
I LTPRGR +E++ +FL+L G+ +D+K+ Y S+ RLF + +Q H F +++L+PP
Sbjct: 250 SSIQFLTPRGRIDIEMYPTFLKLHGKTHDYKVPYDSISRLFQFDRQDQKHIFFIISLEPP 309
Query: 156 IRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLS 215
IR+G+T Y H+V+QF+ + Q EL ++EE L KYKD+L P G + + IL+ L+
Sbjct: 310 IRQGKTKYAHLVIQFQEEE-TQLELNLTEE-LQQKYKDQLLPIMSGNTNSLLYKILKTLT 367
Query: 216 GAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERH 275
G K+T PG F+S + ++K SLKA +G LYPLE+SFFF+ KPPT I EEI +EF R+
Sbjct: 368 GKKLTTPGNFQSNRKLNSIKCSLKANEGFLYPLERSFFFVHKPPTYIKFEEIQSIEFSRY 427
Query: 276 -----AAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMN 323
A GGSN FDL I K F NI R EY NLF++++ K L I+N
Sbjct: 428 DAGPTARGGSN-RTFDLTINYKNSTSIQFTNILREEYPNLFNYLNEKKLNILN 479
>gi|354546711|emb|CCE43443.1| hypothetical protein CPAR2_210870 [Candida parapsilosis]
Length = 546
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 128/364 (35%), Positives = 194/364 (53%), Gaps = 20/364 (5%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT- 60
L F V K +FE+ +S + L GKN+V +E ++D D ++E+ F++P +
Sbjct: 126 LVFNVNNKPSFEIPYDSISNSNLTGKNEVAIELNLDKNN-TKMGDEVVEMRFYVPGTTIE 184
Query: 61 --------------QFVG---DENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTP 103
Q V D AQ F +++ AD+G EA+V+F LTP
Sbjct: 185 QETTTVKNEDGEEEQVVSTNMDSEQSAAQTFYEQLKDKADIGQIAGEAIVSFGDALFLTP 244
Query: 104 RGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLY 163
RGRY ++++ S LRL+G+ D+KIQY + R+F LPK ++ H +++ +DPP+R+GQT Y
Sbjct: 245 RGRYDIDMYASSLRLRGKTYDYKIQYDQIERIFSLPKPDEVHHLIILQIDPPLRQGQTRY 304
Query: 164 PHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPG 223
P +VLQF D + EL +S+E KYK++L+ +Y H V LRGL+ K+ PG
Sbjct: 305 PFLVLQFVKDEETELELNLSDEEFEEKYKNRLKKTYDAPTHIVMAHCLRGLTEKKLVIPG 364
Query: 224 KFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMH 283
F+S + S+KA +G LYPLE+ F F+ KP I + EI V R G S
Sbjct: 365 AFQSRFLQPGISCSVKASEGYLYPLERCFLFVTKPTLYIPYSEISNVVLSRTGGGVSASR 424
Query: 284 YFDLLIRL-KTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDD 342
FDL + L + +H+F +I R E N+ F KG+++ N + A+ QE +
Sbjct: 425 TFDLEVNLIGSSVKHVFGSIDREEQENIEKFCVEKGVRVKNEEKIAKQRLAKALEQEAEM 484
Query: 343 DAVD 346
DA D
Sbjct: 485 DADD 488
>gi|301100516|ref|XP_002899348.1| FACT complex subunit SSRP1, putative [Phytophthora infestans T30-4]
gi|262104265|gb|EEY62317.1| FACT complex subunit SSRP1, putative [Phytophthora infestans T30-4]
Length = 537
Score = 221 bits (562), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 125/332 (37%), Positives = 195/332 (58%), Gaps = 16/332 (4%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQ 61
L F E+ L +SQ L GKN+V L+FH DDT +E ++L+E+ ++P +
Sbjct: 115 LNFRTANASVMELPLEQISQCALPGKNEVELQFHEDDTVAGDE-ETLVEMRLYLPPGD-- 171
Query: 62 FVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGI--AILTPRGRYSVELHLSFLRLQ 119
G+E A+ FR +++ A++ + +++V + LTPRGRY VE++ SFLR+
Sbjct: 172 --GEEEVVTAEEFRQEVLEKANIRSVMGKSIVDLDETIGTFLTPRGRYGVEIYGSFLRMH 229
Query: 120 GQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSE 179
G+ D+KI YS++ R FLL N +T V++L+ PIR+G+ YPH+VLQ + V
Sbjct: 230 GKTFDYKIMYSNINRCFLLELPNGINTAFVISLEEPIRQGKQGYPHLVLQLSKNDVHIDV 289
Query: 180 LLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLK 239
+ SEE+ KY + G + ++ T+ + + G K+ GKF++ AVK ++K
Sbjct: 290 NMSSEEI--KKYNGNIHERMSGALPQIVATLFKFIIGKKVYTSGKFKTHSGERAVKCAVK 347
Query: 240 AEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHA--AGGSNMHYFDLLIRLKT---- 293
A+ GVL+PLEKSF F+ KP T I +EEIDY+EF+R+A +G S FDLL+ K+
Sbjct: 348 AQSGVLFPLEKSFMFIHKPTTFIRYEEIDYIEFQRYAGQSGSSASRNFDLLVSCKSVGGE 407
Query: 294 -EQEHLFRNIQRNEYHNLFDFISGKGLKIMNL 324
+E++F I R E+ L F++ K L+I NL
Sbjct: 408 AAREYIFSAIDRREFPELSQFLTSKKLRIRNL 439
>gi|225562827|gb|EEH11106.1| FACT complex subunit pob3 [Ajellomyces capsulatus G186AR]
Length = 605
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 139/415 (33%), Positives = 208/415 (50%), Gaps = 75/415 (18%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHV--DDTTGANE--------------- 44
L F V + AFE+ +++S T L GKN+V +EF + D TGAN
Sbjct: 110 LAFNVQNRPAFEIPYSEISNTNLAGKNEVAVEFSLPADGVTGANGQSEGSTKNRGRKAGA 169
Query: 45 -KDSLMEISFHIPNS-----NTQFVGDEN---------HPPAQVFRDKIMSMADVGAGGE 89
+D L+E+ F+IP + + DEN A +F + +M A++G
Sbjct: 170 GRDELVEMRFYIPGTALKKEKPEGEEDENGVDGEEAEEQNAANLFYETLMDKAEIGDVAG 229
Query: 90 EAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVV 149
+ TF + LTPRGR+ ++++ S RL+G+ D+KIQY S+ + FLLPK++ HT +
Sbjct: 230 DTFATFLDVLHLTPRGRFDIDMYESSFRLRGKTYDYKIQYQSIKKFFLLPKNDDTHTLIT 289
Query: 150 VTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTT 209
+ LDPP+R+GQT YP +V+Q + D + +L M++ELL T+YKDKLE Y+ IH+V T
Sbjct: 290 LGLDPPLRQGQTRYPFLVMQLKLDDEISIDLNMTDELLQTRYKDKLEAHYEEPIHQVVTK 349
Query: 210 ILRGLSGAKITKP----------------------------------GKFRS-------A 228
+ RGLSG K+ P G+ RS +
Sbjct: 350 VFRGLSGKKVVMPSRDFVRSATGLSQSLSEYRNKNSGPYSENIQSPNGRLRSKITDPQYS 409
Query: 229 QDGYA-VKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDL 287
G++ VK S+KA +G+L+ L+KSF F+PKP T + E I + R S FD+
Sbjct: 410 HHGHSGVKCSIKANEGLLFCLDKSFMFVPKPATYVQIENISVITMSRVGGAISASRTFDI 469
Query: 288 LIRLKTEQ-EHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDD 341
+ LK EH F NI R E L +F K ++ N + +AA L D+
Sbjct: 470 TMTLKGGMGEHQFSNINREEQQPLEEFFKAKNIRFKNEMADDPSALIAAALDNDE 524
>gi|452987761|gb|EME87516.1| hypothetical protein MYCFIDRAFT_54703 [Pseudocercospora fijiensis
CIRAD86]
Length = 567
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 152/456 (33%), Positives = 220/456 (48%), Gaps = 54/456 (11%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHV---DDTTGANEK------------- 45
L F V + AFE+ ++S T L GKN+V +EF V + TG N
Sbjct: 114 LIFNVRNQPAFEIPYTEISNTNLAGKNEVAVEFSVPADSEDTGTNGALGGARGKGKKMGG 173
Query: 46 --DSLMEISFHIPNSNTQ-----------FVGDENHPPAQVFRDKIMSMADVGAGGEEAV 92
D L E+ F+IP + + DE A F +++M+ A++G +
Sbjct: 174 AVDQLTEVRFYIPGTEKRAKGDEDGEDAEEGEDEEQNAANYFYEQLMNKAEIGEVAGDTF 233
Query: 93 VTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTL 152
TF+ I LTPRGR+ ++L+ S RL+G+ D+KI Y S R FLLPK + H + V L
Sbjct: 234 ATFQDILHLTPRGRFDIDLYESSFRLRGKTYDYKISYESAKRFFLLPKPDDMHQLLCVGL 293
Query: 153 DPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILR 212
DPP+R+GQT YP +V+QF+ D VQ EL M++E L KY KL+ Y+ I V + I
Sbjct: 294 DPPLRQGQTRYPFLVMQFKKDEEVQIELNMTDEQLE-KYSGKLQAKYEAPIGNVISKIFH 352
Query: 213 GLSGAKITKP-GKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVE 271
GL+G ++ +P F S VK S+KA +G L+ L+++F F+PKP T I + I V
Sbjct: 353 GLTGKRLIQPSADFTSHHQMSGVKCSIKANEGHLFCLDRAFLFVPKPATYISFDHISSVT 412
Query: 272 FERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTD 331
R S FD+ + LK +H F NI R E L F+ K +K N +M
Sbjct: 413 MSRVGGAVSASRTFDITVSLKQGGDHQFSNINREEQQPLETFLKIKNIKTKN--EMDGDS 470
Query: 332 GVAAVLQEDDDDAVDPHLERIKNEAG------------------GDESDEEDSDFVADKD 373
G+ A +D D V E + G D ++E DSD K
Sbjct: 471 GMLAAALANDPDLVSSDDEDVVQARGSADEDDESVDEDFQADSESDVAEEYDSD---AKS 527
Query: 374 DGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESS 409
G ++ G+ D DA + E + AK E K+ +
Sbjct: 528 SGAGSDEEMGDADGDADGNASESDTAAKVERPKKKT 563
>gi|407925324|gb|EKG18337.1| Structure-specific recognition protein [Macrophomina phaseolina
MS6]
Length = 1346
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 135/384 (35%), Positives = 208/384 (54%), Gaps = 41/384 (10%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVD---DTTGAN--------------- 43
L+F V + AFE+ ++++ T L GKN+V +EF + + TG N
Sbjct: 139 LSFNVQSRPAFELPYSEIANTNLAGKNEVAIEFSLPANGEDTGTNGHLGGARARGKKSGG 198
Query: 44 EKDSLMEISFHIPNSNTQF------------VGDEN----HPPAQVFRDKIMSMADVGAG 87
+D L+E+ F+IP + T+ V DE H A +F + ++ A++G
Sbjct: 199 ARDQLVEMRFYIPGTVTKKEKKEEGEGEGEDVSDEGEEEEHNAASLFYNTLIEKAEIGEI 258
Query: 88 GEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTF 147
+ +TFE I LTPRGR+ ++++ + RL+G+ D+KIQY + + F+LPK + H
Sbjct: 259 AGDTFITFEDILHLTPRGRFGLDMYETSFRLRGKTYDYKIQYDQIKKFFVLPKPDDIHQL 318
Query: 148 VVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEE--LLNTKYKDKLEPSYKGLIHE 205
+ + +DPP+R+GQT YP IV+QF+ D + + ++ E +L KYK KLE Y+G I+
Sbjct: 319 ITIGVDPPLRQGQTRYPFIVMQFKKDEELDEPVPLNIEPDVLEEKYKGKLEAQYEGPIYR 378
Query: 206 VFTTILRGLSGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILH 264
V +LRGLSG K P + F S +K S+KA +G LY ++KSF F+PKP T I
Sbjct: 379 VVAQLLRGLSGRKTIAPSRDFISHHQQSGIKCSIKANEGHLYCMDKSFLFVPKPATYISF 438
Query: 265 EEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNL 324
++I + R S+ FD+ IR+K +H F NI R E L +F K LK N
Sbjct: 439 DQISVITMSRVGGNLSSSRTFDITIRMKNGSDHQFSNINREEQTPLEEFFKIKNLKTKN- 497
Query: 325 GDMKTTDG--VAAVLQEDDDDAVD 346
+M G +AA L +D D++ D
Sbjct: 498 -EMVDDSGALLAAALNDDLDESED 520
>gi|268575214|ref|XP_002642586.1| C. briggsae CBR-HMG-4 protein [Caenorhabditis briggsae]
Length = 696
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 160/528 (30%), Positives = 268/528 (50%), Gaps = 41/528 (7%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIP-NSNT 60
+ F K FE+ +VS KN+ +LEFH +D N + +LME+ FH+P ++ T
Sbjct: 118 IEFSWEDKPIFEIPCTNVSNVTAN-KNEAVLEFHQND----NAQIALMEMRFHMPVDAET 172
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
+ E+ + F+ +++ A + A E+ +V I TPRGRY ++++ + + L G
Sbjct: 173 E----EDVDKVEEFKKAVLAYAGLEAETEQPIVLLTDILCTTPRGRYDIKVYPTSIALHG 228
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI S+ RLFL+P + F V++L+PPIR+GQT Y ++++ F D + EL
Sbjct: 229 KTYDYKIPIKSINRLFLVPHKDGRSVFFVLSLNPPIRQGQTRYSYLIMDFPKDEEQELEL 288
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
+++E L + L+ + G I++ + + + + KIT+PG+F A++ + +
Sbjct: 289 SLTDEQLE-ESNGALKRTMDGPIYKTVSVVFKAICNLKITEPGRFIGHSGTPAIQCTHRQ 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLEK F F+ KP + +E++ R + GG+ D + +K+ +F
Sbjct: 348 NPGLLYPLEKGFLFIHKPAMYLRYEDVSSCHLAR-SDGGTVTRTVDFEVDMKSGGPIIFN 406
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEA---- 356
+++ E + LFD++S K +KI N V A E DD +DP+ +K E
Sbjct: 407 TMEKEENNKLFDYLSKKNIKIRN------PTRVDARAAESSDDEIDPYKAAVKAEGRKRD 460
Query: 357 ------GGDESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSS 410
DE + D D K ++ S E D +SG E++ ES E S
Sbjct: 461 ESDDDESTDEDYDLDKDLKDRKTKEKDSSEGSASEPDDEYDSGSEQDSSGTGES--EPDS 518
Query: 411 VKASTSKKKSRD---------GDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKK 461
+ SKK+ D E KK KK+KDPNAPKRA S + + R ++K+
Sbjct: 519 EEDVPSKKRKSDPKEKREKKEKKEKEGGKKGKKEKDPNAPKRAQSAYFHWFNANRLSLKE 578
Query: 462 SNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
+A DV + G +WK + E+++ +E+KA DK RY+ E+ Y+
Sbjct: 579 DGDSVA--DVAKKAGAKWKTLGAEDKKEWEAKAEKDKTRYETEMKEYR 624
>gi|149247649|ref|XP_001528233.1| hypothetical protein LELG_00753 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146448187|gb|EDK42575.1| hypothetical protein LELG_00753 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 574
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 124/360 (34%), Positives = 193/360 (53%), Gaps = 38/360 (10%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANE-KDSLMEISFHIPNSNT 60
L F V K AFE+ ++S + L GKN+V +EF++ D ++ D ++E+ F++P +
Sbjct: 127 LVFNVNNKPAFEIPYDNISNSNLTGKNEVAIEFNLSDGKTIDKLGDEIVEMRFYVPGTTV 186
Query: 61 QF-------------------------------VGDEN-----HPPAQVFRDKIMSMADV 84
+ + D N AQVF +++ AD+
Sbjct: 187 ELETNTTKKTIKNEDGKEEEKEDEEEKRKSEENMADNNAESMEQNAAQVFYEQLKDKADI 246
Query: 85 GAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQP 144
G EA+V+F LTPRGRY ++++ + LRL+G+ D+KIQY + R+F LPK ++
Sbjct: 247 GQIAGEAIVSFSDALFLTPRGRYDIDMYSTSLRLRGKTYDYKIQYEQIERIFSLPKPDEV 306
Query: 145 HTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIH 204
H +++ +DPP+R+GQT YP +VLQF D + EL +S+E + KYK++L+ +Y +
Sbjct: 307 HHLIIIQIDPPLRQGQTRYPFLVLQFARDEETELELNLSDEEFDAKYKNRLKKTYDAPTY 366
Query: 205 EVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILH 264
V LRGL+ K+ PG F+S + SLKA +G LYPL++ F F+ KP I +
Sbjct: 367 IVMAHCLRGLTEKKLFTPGSFQSRFLQPGLSCSLKASEGYLYPLDRCFLFVTKPTLYIPY 426
Query: 265 EEIDYVEFERHAAGGSNMHYFDLLIRL-KTEQEHLFRNIQRNEYHNLFDFISGKGLKIMN 323
EI V R G S FDL I + + Q+H+F +I R E N+ F KG+K+ N
Sbjct: 427 SEISNVVMSRTGGGVSASRTFDLEINIVGSTQKHVFGSIDREEQDNIERFCKEKGVKVKN 486
>gi|348667228|gb|EGZ07054.1| hypothetical protein PHYSODRAFT_348389 [Phytophthora sojae]
Length = 540
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 125/332 (37%), Positives = 196/332 (59%), Gaps = 16/332 (4%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQ 61
L F E+ L +SQ L GKN+V L+FH DDT +E ++L+E+ ++P +
Sbjct: 115 LNFRTSNASVMELPLEQISQCALPGKNEVELQFHEDDTVAGDE-ETLVEMRLYLPPGD-- 171
Query: 62 FVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTF-EGIA-ILTPRGRYSVELHLSFLRLQ 119
G++ A+ FR +++ A++ + +++V E I LTPRGRY VE++ SFLR+
Sbjct: 172 --GEDEVVTAEEFRQQVLEKANIRSVMGKSIVDLDESIGTFLTPRGRYGVEIYGSFLRMH 229
Query: 120 GQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSE 179
G+ D+KI YS++ R FLL N +T V++L+ PIR+G+ YPH+VLQ + V
Sbjct: 230 GKTFDYKIMYSNINRCFLLELPNGLNTAFVISLEEPIRQGKQGYPHLVLQLSKNDVHIDV 289
Query: 180 LLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLK 239
+ +EE+ KY + G + ++ T+ + + G K+ GKF++ AVK ++K
Sbjct: 290 NMSAEEI--KKYNGNIHERMSGALPQIVATLFKFIIGKKVYTSGKFKTHSGDRAVKCAVK 347
Query: 240 AEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHA--AGGSNMHYFDLLIRLKT---- 293
A+ GVL+PLEKSF F+ KP T I +EEIDY+EF+R+A +G S FDLL+ K+
Sbjct: 348 AQSGVLFPLEKSFMFIHKPTTFIRYEEIDYIEFQRYAGQSGSSASRNFDLLVSCKSVGGE 407
Query: 294 -EQEHLFRNIQRNEYHNLFDFISGKGLKIMNL 324
+E++F I R E+ L F++ K L+I NL
Sbjct: 408 AAREYIFSAIDRREFPELSQFLTSKKLRIRNL 439
>gi|443897087|dbj|GAC74429.1| nucleosome-binding factor SPN, POB3 subunit [Pseudozyma antarctica
T-34]
Length = 556
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 146/434 (33%), Positives = 238/434 (54%), Gaps = 38/434 (8%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEF----------HVDDTTGANEK------ 45
+ F+V K AFE+ LA ++ + + K +V +EF + T G++ K
Sbjct: 129 VQFLVRDKLAFELPLAHLANSNI-AKTEVSMEFLNPEQQQPGANTGSTDGSSSKSRRIKG 187
Query: 46 DSLMEISFHIPN----------SNTQFVGDENH--PPAQVFRDKIMSMADVGAGGEEAVV 93
D L+E+ ++P ++ GD+N+ A+ F + + S AD+G +++V
Sbjct: 188 DQLVEMRLYVPGQAAKDDGSDAASAADGGDDNNEETAAEAFHEALKSKADIGQVAGDSIV 247
Query: 94 TFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLD 153
F+ + +LTPRGRY +++ +F+RL+G+ D+KI YSS+ +LFLLPKS++ H +V+ LD
Sbjct: 248 VFKEVLVLTPRGRYDIDVFSTFIRLRGKTYDYKILYSSMNKLFLLPKSDEIHVMLVIGLD 307
Query: 154 PPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRG 213
PPIR+GQT YP++VLQF + + +EL + +E + TKY KL+ Y+ + T + +
Sbjct: 308 PPIRQGQTRYPYLVLQFPREEEMDAELNLDDETIATKYDGKLKKRYEEPTFRIVTNMFKV 367
Query: 214 LSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFE 273
LSG K+ P F S+ ++K ++KA DG LYPLEKS ++ K P + + EI
Sbjct: 368 LSGQKVATPTDFESSSGQTSIKCNVKAADGNLYPLEKSLLWVSKQPVYVPYSEIHQAILS 427
Query: 274 RHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKT---T 330
R ++ FDL + K +H F++I R E L +++ + ++I N +T
Sbjct: 428 RVGGAVASSKTFDLRVATKGGTDHTFQSISREELDRLKAWLAERKVRIKNEMAEETGGLA 487
Query: 331 DGVAAVLQEDDDDAVDPHLERIKNEAGGDESDEEDSDFVADKD-DGGSPTDDSGEEDSDA 389
AA L DDD+ + + A DE EED DF AD D DGGSP++ S ++D
Sbjct: 488 AAAAAGLLSDDDEEMG-----VAGGADDDEDSEEDEDFAADSDSDGGSPSEASSDDDDAG 542
Query: 390 SESGGEKEKPAKKE 403
+ G E+ K +K+
Sbjct: 543 YDEGDERPKKKRKD 556
>gi|453089399|gb|EMF17439.1| SSrecog-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 570
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 135/383 (35%), Positives = 194/383 (50%), Gaps = 35/383 (9%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHV---DDTTGAN--------------- 43
L F V + AFE+ ++S T L GKN+V +EF + + TG N
Sbjct: 113 LAFNVRNQPAFEIPYTEISNTNLAGKNEVAVEFSLPADGEDTGTNGHLGGARAKGKKMGG 172
Query: 44 EKDSLMEISFHIPNSNTQ-------------FVGDENHPPAQVFRDKIMSMADVGAGGEE 90
D L EI F+IP + + E A +F + +M+ A++G +
Sbjct: 173 AADQLTEIRFYIPGTEKRAKGDDEDGEDAEDGEEAEQQNAANLFYETLMNKAEIGEVAGD 232
Query: 91 AVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVV 150
TF+ I LTPRGR+ ++L+ S RL+G+ D+KI Y S R FLLPK + H + +
Sbjct: 233 TYATFQDILHLTPRGRFDIDLYESSFRLRGKTYDYKISYESAKRFFLLPKPDDMHQLLCI 292
Query: 151 TLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTI 210
LDPP+R+GQT YP +V+QF+ D V EL M++E L KY KL P Y+ I V + I
Sbjct: 293 GLDPPLRQGQTRYPFLVMQFKKDEEVAIELNMTDEQLQ-KYSGKLSPKYEAPIGNVVSKI 351
Query: 211 LRGLSGAKITKPG-KFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDY 269
GL+G ++ +P +F S VK S+KA +G L+ L+K+F F+PKP T I + I
Sbjct: 352 FHGLTGKRLIQPSDQFVSHHQMSGVKCSIKANEGHLFCLDKAFLFVPKPATYISFDNISS 411
Query: 270 VEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKT 329
V R S FD+ + LK+ +H F NI R E L F KG+K N +M
Sbjct: 412 VTMSRVGGAVSASRTFDIAVTLKSGSDHQFSNINREEQQPLESFFKAKGIKTKN--EMDG 469
Query: 330 TDGVAAVLQEDDDDAVDPHLERI 352
G+ A +D D V E +
Sbjct: 470 DTGMLAAALANDPDLVSSEDEEV 492
>gi|321264830|ref|XP_003197132.1| subunit of the heterodimeric FACT complex; Pob3p [Cryptococcus
gattii WM276]
gi|317463610|gb|ADV25345.1| Subunit of the heterodimeric FACT complex, putative; Pob3p
[Cryptococcus gattii WM276]
Length = 586
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 151/450 (33%), Positives = 239/450 (53%), Gaps = 45/450 (10%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVD-----DTTGANEK--DSLMEISFH 54
L F V K AF+V L+ V+ + + GKN+V LEF+ D N++ D ++E+ F+
Sbjct: 120 LVFQVQGKTAFDVPLSQVANSNIAGKNEVALEFNPSSNYKFDPKDLNKRPPDEMVEMRFY 179
Query: 55 IPNSNTQFVGDENHP---------------PAQVFRDKIMSMADVGAGGEEAVVTFEGIA 99
IP + + G + A F I AD+GA +++V FE
Sbjct: 180 IPGKSMKMAGSDAGSGGEETELDEEGNEVSAADAFHSLIKEKADIGAVVGDSIVVFEDCL 239
Query: 100 ILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKG 159
ILTPRGR+S+E++ +RL G++ D ++ +SS+ R+FLLPK + H +V+ LDPPIR+G
Sbjct: 240 ILTPRGRFSIEVYTDSIRLVGKSTDHRVPFSSIHRIFLLPKLDDLHVQLVLGLDPPIRQG 299
Query: 160 QTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKI 219
T YP +V Q+ D VV +EL +++E L T+Y D LE +Y+ +V + +L+ L+G K+
Sbjct: 300 ATRYPFLVAQWPKDEVVNAELNLTDEEL-TQYPD-LEKTYEATTFQVVSRVLKALTGKKV 357
Query: 220 TKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGG 279
T PG R+AQ +++++KA G LY LEK F+ K P LI + D + F R G
Sbjct: 358 TPPGSLRNAQGLNGIRANVKAVQGELYFLEKGLIFISKQPILIDFSKTDSISFSRVGGGV 417
Query: 280 SNMHYFDLLIRLKT-EQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQ 338
++ FD+ + KT H+F I + E + F+ K +++ N + T D +
Sbjct: 418 ASARTFDMRVVSKTGGANHVFSAINKQEVGPISSFLQSKNIRLKNEMEEATVD-IDEPFS 476
Query: 339 EDDDDAVDPHLERIKNEAGGDES------------DEEDSDFVADKDDGGSPTDDSGEED 386
+DD++ P + ++A D+S + ED DF DGGSP++ +ED
Sbjct: 477 DDDEEMESPSEDERPSKAKNDKSKTVKKSADDDEDESEDEDFEDASSDGGSPSESDSDED 536
Query: 387 ----SDASESGGE---KEKPAKKESKKESS 409
SDAS+ E K+ AK+ KE+S
Sbjct: 537 SGMASDASDPMMEELRKKNQAKRAKAKETS 566
>gi|452846982|gb|EME48914.1| hypothetical protein DOTSEDRAFT_67841 [Dothistroma septosporum
NZE10]
Length = 568
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 146/452 (32%), Positives = 216/452 (47%), Gaps = 53/452 (11%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDT---TGANEK------------- 45
L F V + AFE+ ++S T L GKN+V +EF + + TG N
Sbjct: 115 LVFNVRNQPAFEIPYTEISNTNLAGKNEVAVEFSLPENGEETGTNGSLGGARSKGRKMGG 174
Query: 46 --DSLMEISFHIPNSNTQFVG-------------DENHPPAQVFRDKIMSMADVGAGGEE 90
D L E+ F+IP + G DE A F + +M+ A++G +
Sbjct: 175 AVDQLTEMRFYIPGTEKIHRGEEGEDGEKADGEEDEEQNAANFFYETLMNKAEIGEVAGD 234
Query: 91 AVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVV 150
TF+ + LTPRGR+ ++L+ + RL+G+ D+KI Y S R F+LPK + H + +
Sbjct: 235 TFATFQDVLHLTPRGRFDIDLYENSFRLRGKTYDYKISYESAKRFFILPKPDDMHQLLCI 294
Query: 151 TLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTI 210
LDPP+R+GQT YP +V+QF+ D V+ EL M+ E+L KY KL P Y+ + V + I
Sbjct: 295 GLDPPLRQGQTRYPFLVMQFKKDEEVKIELNMTPEVLKEKYNGKLLPMYEEPVGRVVSKI 354
Query: 211 LRGLSGAKITKP-GKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDY 269
GL+G ++ +P F S VK S+KA +G L+ L+++F F+PKP T I + I
Sbjct: 355 FHGLTGKRLIQPSADFTSHHQMSGVKCSIKANEGHLFCLDRAFLFVPKPATYISFDHIAS 414
Query: 270 VEFERHAAGGSNMHYFDLLIRLKT-EQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMK 328
V R S FD+ + LK EH F NI R E L F K +K N +M
Sbjct: 415 VTMSRVGGAVSASRTFDISVTLKNGAGEHQFSNINREEQSPLESFFKIKNIKTKN--EMD 472
Query: 329 TTDGVAAVLQEDDDDAVDPHLERIKNEAG------------------GDESDEEDSDFVA 370
G+ A DD D E + + G D ++E DSD +
Sbjct: 473 GDGGMLAAALADDPDLASSDEEVVMQDRGSADEDSEEADEDFAADSESDVAEEFDSDAKS 532
Query: 371 DKDDGGSPTDDSGEEDSDASESGGEKEKPAKK 402
DD + DD+ S++ + E+P KK
Sbjct: 533 SGDDSDAEMDDAEGAAGSGSDTAEKVERPKKK 564
>gi|401841733|gb|EJT44076.1| POB3-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 549
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 132/433 (30%), Positives = 226/433 (52%), Gaps = 42/433 (9%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPN---- 57
+ F + K FE+ A ++ T L KN+V +EF++ D D L+E+ F+IP
Sbjct: 123 MVFALNGKPTFEIPYARINNTNLTSKNEVGIEFNIQDEEYQPAGDELVEMRFYIPGVIQT 182
Query: 58 ------SNTQFVGDENHPP----------------AQVFRDKIMSMADVGAGGEEAVVTF 95
+ + DE P A+ F +++ AD+G +A+V+F
Sbjct: 183 NVDENMTKKEESSDEVMPKKEDGEDVETAIEEKSMAEAFYEELKEKADIGEVAGDAIVSF 242
Query: 96 EGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPP 155
+ + TPRGRY ++++ + +RL+G+ ++K+Q+ + R+ LPK++ H +V+ ++PP
Sbjct: 243 QDVFFTTPRGRYDIDVYKNSIRLRGKTYEYKLQHRQIQRIVSLPKADDIHHLLVLAIEPP 302
Query: 156 IRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLS 215
+R+GQT YP +VLQF+ D + +L + +E YK+KL+ Y H V + +L+GL+
Sbjct: 303 LRQGQTTYPFLVLQFQKDEETEVQLNLEDEDYEENYKEKLKKQYDAKTHIVLSHVLKGLT 362
Query: 216 GAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERH 275
G ++ PG+++S D AV S KA +G LYPL+ +FFFL KP I ++ V R
Sbjct: 363 GRRVIVPGEYKSKYDQCAVSCSFKANEGYLYPLDNAFFFLTKPTLYIPFGDVSMVNISRA 422
Query: 276 AAGGSNMHYFDLLIRLKTEQ-EHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVA 334
++ FDL + L++ + F NI + E L F+ K L++ N D + + +
Sbjct: 423 GQTSTSSRTFDLEVVLRSNRGSTTFANISKEEQQLLEQFLKSKNLRVKN-EDREVQERLQ 481
Query: 335 AVLQEDDDDAVDPHLERIKNEAGGDESDEEDSDFVADKDDGGSPTDDSGEE-DSDA---- 389
L D D+ E + + G++ + D DF D+ +D EE DSDA
Sbjct: 482 TALGSDSDE------EDVNMGSAGEDDESVDEDFQVSSDNDA---EDVAEEFDSDAVLSD 532
Query: 390 SESGGEKEKPAKK 402
+E G ++E+P+KK
Sbjct: 533 AEKGSDEERPSKK 545
>gi|365759130|gb|EHN00937.1| Pob3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 549
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 132/433 (30%), Positives = 226/433 (52%), Gaps = 42/433 (9%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPN---- 57
+ F + K FE+ A ++ T L KN+V +EF++ D D L+E+ F+IP
Sbjct: 123 MVFALNGKPTFEIPYARINNTNLTSKNEVGIEFNIQDEEYQPAGDELVEMRFYIPGVIQT 182
Query: 58 ------SNTQFVGDENHPP----------------AQVFRDKIMSMADVGAGGEEAVVTF 95
+ + DE P A+ F +++ AD+G +A+V+F
Sbjct: 183 NVDENMTKKEESSDEVMPKKEDGEGVETAIEEKSMAEAFYEELKEKADIGEVAGDAIVSF 242
Query: 96 EGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPP 155
+ + TPRGRY ++++ + +RL+G+ ++K+Q+ + R+ LPK++ H +V+ ++PP
Sbjct: 243 QDVFFTTPRGRYDIDVYKNSIRLRGKTYEYKLQHRQIQRIVSLPKADDIHHLLVLAIEPP 302
Query: 156 IRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLS 215
+R+GQT YP +VLQF+ D + +L + +E YK+KL+ Y H V + +L+GL+
Sbjct: 303 LRQGQTTYPFLVLQFQKDEETEVQLNLEDEDYEENYKEKLKKQYDAKTHIVLSHVLKGLT 362
Query: 216 GAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERH 275
G ++ PG+++S D AV S KA +G LYPL+ +FFFL KP I ++ V R
Sbjct: 363 GRRVIVPGEYKSKYDQCAVSCSFKANEGYLYPLDNAFFFLTKPTLYIPFGDVSMVNISRA 422
Query: 276 AAGGSNMHYFDLLIRLKTEQ-EHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVA 334
++ FDL + L++ + F NI + E L F+ K L++ N D + + +
Sbjct: 423 GQTSTSSRTFDLEVVLRSNRGSTTFANISKEEQQLLEQFLKSKNLRVKN-EDREVQERLQ 481
Query: 335 AVLQEDDDDAVDPHLERIKNEAGGDESDEEDSDFVADKDDGGSPTDDSGEE-DSDA---- 389
L D D+ E + + G++ + D DF D+ +D EE DSDA
Sbjct: 482 TALGSDSDE------EDVNMGSAGEDDESVDEDFQVSSDNDA---EDVAEEFDSDAVLSD 532
Query: 390 SESGGEKEKPAKK 402
+E G ++E+P+KK
Sbjct: 533 AEKGSDEERPSKK 545
>gi|344234731|gb|EGV66599.1| hypothetical protein CANTEDRAFT_117679 [Candida tenuis ATCC 10573]
Length = 546
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 139/430 (32%), Positives = 224/430 (52%), Gaps = 33/430 (7%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIP----N 57
L F + K +FE+ ++++ + L GKN+V +E +++ T+ + D L+E+ F++P N
Sbjct: 123 LIFSINGKPSFEIPYSEINNSNLTGKNEVAVELNLE-TSASKAGDELVEMRFYVPGVVEN 181
Query: 58 SNTQFVGDENH---------------PPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILT 102
+N A VF +++ A++G EA+V+F + LT
Sbjct: 182 ETKTVTKVKNEEGEEKEHEEAEIEEISAASVFYEQLKDNANIGQVAGEAIVSFSDVLFLT 241
Query: 103 PRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTL 162
PRGRY ++++ + LRL+G+ D+KIQY + R+F LPK ++ H VV+ +DPP+R+GQT
Sbjct: 242 PRGRYDIDMYPTSLRLRGKTYDYKIQYKQIERIFSLPKPDETHHLVVLQIDPPLRQGQTR 301
Query: 163 YPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKP 222
YP +VLQF + ++ EL +SEE +KY+ KL+ Y H V + +GL+ ++ P
Sbjct: 302 YPFLVLQFAREEEIEVELNLSEEDYKSKYEGKLKKRYDAETHLVMSHCFKGLTERRLIAP 361
Query: 223 GKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNM 282
G F+S V +LKA +G LYPL++ F F+ KP I E+ + R G S
Sbjct: 362 GSFQSRFLQPGVACNLKASEGYLYPLDRCFLFVTKPTVYIPFSEVSNIVMSRTGTGVSAS 421
Query: 283 HYFDLLIRLK-TEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDD 341
FDL I L+ + Q H+F +I R E ++ + KGL+I K + VA +
Sbjct: 422 RTFDLEINLRSSNQSHVFGSIDREEQASIESYCVQKGLRI------KNEEKVAKAMMAKA 475
Query: 342 DDAVDPHLERIKNEAGGDESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKE---- 397
+ E + S E+ + GS +D + E DSDAS SG + E
Sbjct: 476 LNEAADDDEDDDDADIDMGSAGEEESEEDGDFNSGSDSDPAEEFDSDASLSGSDDENMSE 535
Query: 398 --KPAKKESK 405
+PAKK++K
Sbjct: 536 GGEPAKKKTK 545
>gi|326520880|dbj|BAJ92803.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 292
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 152/291 (52%), Positives = 197/291 (67%), Gaps = 12/291 (4%)
Query: 238 LKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGS-NMHYFDLLIRLKTEQE 296
LK + +L L+K+F F P + + A G S + HYFDLL++LK +QE
Sbjct: 6 LKMDCCIL--LKKAFSFCQSPRHSFCMRRLSMLNLSAMAGGASMSSHYFDLLVKLKNDQE 63
Query: 297 HLFRNIQRNEYHNLFDFISGKGLKIMNLGD--MKTTDGVAAVLQEDDDDAVDPHLERIKN 354
HLFRNIQRNEYHNLF+F+SGK LKI+NLG+ T VAA LQ DDD VDPHLERIKN
Sbjct: 64 HLFRNIQRNEYHNLFNFVSGKNLKILNLGEDGQDRTGAVAAALQSTDDDPVDPHLERIKN 123
Query: 355 EAGGDESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSSVKAS 414
+AG +ESDEED DFVADKDD GS D EE SDAS S GEKEK +KKE+ VK
Sbjct: 124 QAGDEESDEEDEDFVADKDDSGS-PSDDSEEGSDASISDGEKEKSSKKEASSSKPPVK-- 180
Query: 415 TSKKKSRDGDE-DGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGR 473
K KS D + + +K K+KK KDPNAPKRA++ F++FS+ ER N+K NP ++ TD+ +
Sbjct: 181 -RKPKSVDVESSEKRKPKKKKTKDPNAPKRAIAPFMYFSKAERANLKNINPELSTTDIAK 239
Query: 474 VLGERWKKMSVEEREPYESKARADKKRYKDEISGYK--NPKPMDIDSGNES 522
LGE+W+KMS EE++PY +++ DKKRY +E + Y+ P+D+DS + S
Sbjct: 240 KLGEKWQKMSAEEKQPYLEQSQVDKKRYAEETAAYRGAGAAPVDVDSADGS 290
>gi|50293701|ref|XP_449262.1| hypothetical protein [Candida glabrata CBS 138]
gi|74608533|sp|Q6FKI2.1|POB3_CANGA RecName: Full=FACT complex subunit POB3; AltName: Full=Facilitates
chromatin transcription complex subunit POB3
gi|49528575|emb|CAG62236.1| unnamed protein product [Candida glabrata]
Length = 543
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 129/415 (31%), Positives = 225/415 (54%), Gaps = 49/415 (11%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQ 61
+ F + K FE+ A ++ T L KN+V +EF++ D T D ++E+ F++P S
Sbjct: 123 MVFALNGKPVFEIPYARINNTNLTAKNEVAVEFNIQDDTYQPAGDEMVEMRFYLPGS--- 179
Query: 62 FVGDENHPP--------------------AQVFRDKIMSMADVGAGGEEAVVTFEGIAIL 101
V DE+ P A+ F +++ + AD+G +A+V+F+ +
Sbjct: 180 VVVDEDQPAPKKEGEEEGEEAAETETKSLAEAFYEELKNKADIGEIAGDAIVSFQDVFFT 239
Query: 102 TPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQT 161
TPRGRY ++++ + +RL+G+ ++K+Q++ + R+ LPK++ + VV+ +DPP+R+GQT
Sbjct: 240 TPRGRYDIDIYENSIRLRGKTYEYKLQHNQIQRIVSLPKADDINHLVVLAMDPPLRQGQT 299
Query: 162 LYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITK 221
YP +VLQF+ D + +L +S++ KYKDKL+ Y H V + +L+GL+G ++
Sbjct: 300 TYPFLVLQFQKDEETEVQLNLSDQEYEEKYKDKLKKQYDSKTHIVISHVLKGLTGRRVVV 359
Query: 222 PGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSN 281
PG+++S + AV S KA +G LYPL+ +FFFL KP I ++ V R ++
Sbjct: 360 PGEYKSKYEQCAVSCSYKANEGYLYPLDNAFFFLTKPTLYIPFNDVSSVVISRAGQTSTS 419
Query: 282 MHYFDLLIRLKTEQ-EHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQED 340
FDL + L++ + +F NI + E L +F+ K L++ N E+
Sbjct: 420 SRTFDLEVILRSNRGSTIFGNISKEEQQLLENFLKSKNLRVKN---------------EE 464
Query: 341 DDDAVDPHLERIKNEAGGDESDEEDSDFVADKDDGGSPTDD----SGEEDSDASE 391
D V R+++ G D SD+ED + + +D S +D SG++D + +E
Sbjct: 465 KDAQV-----RLQSALGSD-SDDEDVNMGSAGEDDESVDEDFHVSSGDDDDEVAE 513
>gi|302690071|ref|XP_003034715.1| hypothetical protein SCHCODRAFT_81855 [Schizophyllum commune H4-8]
gi|300108410|gb|EFI99812.1| hypothetical protein SCHCODRAFT_81855 [Schizophyllum commune H4-8]
Length = 651
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 123/333 (36%), Positives = 190/333 (57%), Gaps = 16/333 (4%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGA--NEKDSLMEISFHIPNSN 59
L F+V + AFE+ L +V+ + + G+ +V LEF T+ + + D ++EI FH+P
Sbjct: 116 LAFLVSDRVAFELPLQNVANSNIAGRTEVSLEFSGLTTSKSVRPQGDEMVEIRFHVPGVQ 175
Query: 60 TQFVGD-----------ENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYS 108
T+ G+ E AQVF D I A++G + +++FE + ILTPRGRY
Sbjct: 176 TKLKGESASDAGQSDDEEEISAAQVFHDLIKDKAEIGQVSGDMILSFEEVLILTPRGRYD 235
Query: 109 VELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVL 168
+++ FLRL+G+ D+KI Y+S+ RLFLL K + H ++ L+ PIR+GQT Y ++V+
Sbjct: 236 LDMFPDFLRLRGKTYDYKIVYTSISRLFLLAKDDN-HVLFILGLNTPIRQGQTRYSYLVM 294
Query: 169 QFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSA 228
QF + + +EL M++E L KY LE SY+ +EV + I +GL+G KI G F+S
Sbjct: 295 QFTHEEEITAELNMTDEQL-AKYNGTLEKSYEKPTYEVVSAIFKGLTGKKIIGVGGFKST 353
Query: 229 QDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLL 288
D +K++LKA G L+ L+K FF+ K P LI +I F R GG+ FDL
Sbjct: 354 ADHPGIKANLKAVQGDLFILDKQLFFVSKQPLLIDFSDIHAAIFSR-VGGGTGSRTFDLR 412
Query: 289 IRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKI 321
+ ++ EH F +I + EY + F+ LK+
Sbjct: 413 VETRSGPEHTFSSIAKEEYEGVEKFLKASKLKV 445
>gi|344234732|gb|EGV66600.1| SSrecog-domain-containing protein [Candida tenuis ATCC 10573]
Length = 448
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 139/430 (32%), Positives = 224/430 (52%), Gaps = 33/430 (7%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIP----N 57
L F + K +FE+ ++++ + L GKN+V +E +++ T+ + D L+E+ F++P N
Sbjct: 25 LIFSINGKPSFEIPYSEINNSNLTGKNEVAVELNLE-TSASKAGDELVEMRFYVPGVVEN 83
Query: 58 SNTQFVGDENH---------------PPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILT 102
+N A VF +++ A++G EA+V+F + LT
Sbjct: 84 ETKTVTKVKNEEGEEKEHEEAEIEEISAASVFYEQLKDNANIGQVAGEAIVSFSDVLFLT 143
Query: 103 PRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTL 162
PRGRY ++++ + LRL+G+ D+KIQY + R+F LPK ++ H VV+ +DPP+R+GQT
Sbjct: 144 PRGRYDIDMYPTSLRLRGKTYDYKIQYKQIERIFSLPKPDETHHLVVLQIDPPLRQGQTR 203
Query: 163 YPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKP 222
YP +VLQF + ++ EL +SEE +KY+ KL+ Y H V + +GL+ ++ P
Sbjct: 204 YPFLVLQFAREEEIEVELNLSEEDYKSKYEGKLKKRYDAETHLVMSHCFKGLTERRLIAP 263
Query: 223 GKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNM 282
G F+S V +LKA +G LYPL++ F F+ KP I E+ + R G S
Sbjct: 264 GSFQSRFLQPGVACNLKASEGYLYPLDRCFLFVTKPTVYIPFSEVSNIVMSRTGTGVSAS 323
Query: 283 HYFDLLIRLK-TEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDD 341
FDL I L+ + Q H+F +I R E ++ + KGL+I K + VA +
Sbjct: 324 RTFDLEINLRSSNQSHVFGSIDREEQASIESYCVQKGLRI------KNEEKVAKAMMAKA 377
Query: 342 DDAVDPHLERIKNEAGGDESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKE---- 397
+ E + S E+ + GS +D + E DSDAS SG + E
Sbjct: 378 LNEAADDDEDDDDADIDMGSAGEEESEEDGDFNSGSDSDPAEEFDSDASLSGSDDENMSE 437
Query: 398 --KPAKKESK 405
+PAKK++K
Sbjct: 438 GGEPAKKKTK 447
>gi|6323571|ref|NP_013642.1| Pob3p [Saccharomyces cerevisiae S288c]
gi|2497082|sp|Q04636.1|POB3_YEAST RecName: Full=FACT complex subunit POB3; AltName: Full=Facilitates
chromatin transcription complex subunit POB3
gi|558405|emb|CAA86251.1| unnamed protein product [Saccharomyces cerevisiae]
gi|151946095|gb|EDN64326.1| DNA polymerase delta binding protein [Saccharomyces cerevisiae
YJM789]
gi|190408174|gb|EDV11439.1| DNA polymerase delta binding protein [Saccharomyces cerevisiae
RM11-1a]
gi|207342538|gb|EDZ70274.1| YML069Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256269746|gb|EEU05013.1| Pob3p [Saccharomyces cerevisiae JAY291]
gi|259148507|emb|CAY81752.1| Pob3p [Saccharomyces cerevisiae EC1118]
gi|285813933|tpg|DAA09828.1| TPA: Pob3p [Saccharomyces cerevisiae S288c]
gi|323307812|gb|EGA61074.1| Pob3p [Saccharomyces cerevisiae FostersO]
gi|323352957|gb|EGA85257.1| Pob3p [Saccharomyces cerevisiae VL3]
gi|349580219|dbj|GAA25379.1| K7_Pob3p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392297513|gb|EIW08613.1| Pob3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 552
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 134/437 (30%), Positives = 224/437 (51%), Gaps = 47/437 (10%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQ 61
+ F + K FE+ A ++ T L KN+V +EF++ D D L+E+ F+IP Q
Sbjct: 123 MVFALNGKPTFEIPYARINNTNLTSKNEVGIEFNIQDEEYQPAGDELVEMRFYIPGV-IQ 181
Query: 62 FVGDENHPP------------------------------AQVFRDKIMSMADVGAGGEEA 91
DEN A+ F +++ AD+G +A
Sbjct: 182 TNVDENMTKKEESSNEVVPKKEDGAEGEDVQMAVEEKSMAEAFYEELKEKADIGEVAGDA 241
Query: 92 VVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVT 151
+V+F+ + TPRGRY ++++ + +RL+G+ ++K+Q+ + R+ LPK++ H +V+
Sbjct: 242 IVSFQDVFFTTPRGRYDIDIYKNSIRLRGKTYEYKLQHRQIQRIVSLPKADDIHHLLVLA 301
Query: 152 LDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTIL 211
++PP+R+GQT YP +VLQF+ D + +L + +E YKDKL+ Y H V + +L
Sbjct: 302 IEPPLRQGQTTYPFLVLQFQKDEETEVQLNLEDEDYEENYKDKLKKQYDAKTHIVLSHVL 361
Query: 212 RGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVE 271
+GL+ ++ PG+++S D AV S KA +G LYPL+ +FFFL KP I ++ V
Sbjct: 362 KGLTDRRVIVPGEYKSKYDQCAVSCSFKANEGYLYPLDNAFFFLTKPTLYIPFSDVSMVN 421
Query: 272 FERHAAGGSNMHYFDLLIRLKTEQ-EHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTT 330
R ++ FDL + L++ + F NI + E L F+ K L++ N D +
Sbjct: 422 ISRAGQTSTSSRTFDLEVVLRSNRGSTTFANISKEEQQLLEQFLKSKNLRVKN-EDREVQ 480
Query: 331 DGVAAVLQEDDDDAVDPHLERIKNEAGGDESDEEDSDFVADKDDGGSPTDDSGEE-DSDA 389
+ + L D D+ E I + G++ + D DF D+ D+ EE DSDA
Sbjct: 481 ERLQTALGSDSDE------EDINMGSAGEDDESVDEDFQVSSDNDA---DEVAEEFDSDA 531
Query: 390 ----SESGGEKEKPAKK 402
+E G ++E+P+KK
Sbjct: 532 ALSDAEGGSDEERPSKK 548
>gi|323336172|gb|EGA77443.1| Pob3p [Saccharomyces cerevisiae Vin13]
gi|365763685|gb|EHN05211.1| Pob3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 552
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 134/437 (30%), Positives = 224/437 (51%), Gaps = 47/437 (10%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQ 61
+ F + K FE+ A ++ T L KN+V +EF++ D D L+E+ F+IP Q
Sbjct: 123 MVFALNGKPTFEIPYARINNTNLTSKNEVGIEFNIQDEEYQPAGDELVEMRFYIPGV-IQ 181
Query: 62 FVGDENHPP------------------------------AQVFRDKIMSMADVGAGGEEA 91
DEN A+ F +++ AD+G +A
Sbjct: 182 TNVDENMTKKEESSNEVVPKKEDGAEGEDVQMAVEEKSMAEAFYEELKEKADIGEVAGDA 241
Query: 92 VVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVT 151
+V+F+ + TPRGRY ++++ + +RL+G+ ++K+Q+ + R+ LPK++ H +V+
Sbjct: 242 IVSFQDVFFTTPRGRYDIDIYKNSIRLRGKTYEYKLQHRQIQRIVSLPKADDIHHLLVLA 301
Query: 152 LDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTIL 211
++PP+R+GQT YP +VLQF+ D + +L + +E YKDKL+ Y H V + +L
Sbjct: 302 IEPPLRQGQTTYPFLVLQFQKDEETEVQLNLEDEDYEENYKDKLKKQYDAKTHIVLSHVL 361
Query: 212 RGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVE 271
+GL+ ++ PG+++S D AV S KA +G LYPL+ +FFFL KP I ++ V
Sbjct: 362 KGLTDRRVIVPGEYKSKYDQCAVSCSFKANEGYLYPLDNAFFFLTKPTLYIPFSDVSMVN 421
Query: 272 FERHAAGGSNMHYFDLLIRLKTEQ-EHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTT 330
R ++ FDL + L++ + F NI + E L F+ K L++ N D +
Sbjct: 422 ISRAGQTSTSSRTFDLEVVLRSNRGSTTFANISKEEQQLLEQFLKSKNLRVKN-EDREVQ 480
Query: 331 DGVAAVLQEDDDDAVDPHLERIKNEAGGDESDEEDSDFVADKDDGGSPTDDSGEE-DSDA 389
+ + L D D+ E I + G++ + D DF D+ D+ EE DSDA
Sbjct: 481 ERLQTALGSDSDE------EDINMGSAGEDDESVDEDFQVSSDNDA---DEVAEEFDSDA 531
Query: 390 ----SESGGEKEKPAKK 402
+E G ++E+P+KK
Sbjct: 532 ALSDAEGGSDEERPSKK 548
>gi|449298844|gb|EMC94859.1| hypothetical protein BAUCODRAFT_565015 [Baudoinia compniacensis
UAMH 10762]
Length = 490
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 136/378 (35%), Positives = 196/378 (51%), Gaps = 36/378 (9%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHV---DDTTGAN--------------- 43
LTF V + AFE+ ++S T L GKN+V +EF + + TG N
Sbjct: 113 LTFNVRNQPAFEIPYTEISNTNLAGKNEVAVEFSLPADGEETGTNGHLGGARSKGRKMGG 172
Query: 44 EKDSLMEISFHIPNSNTQ---------------FVGDENHPPAQVFRDKIMSMADVGAGG 88
D L E+ F+IP + T+ +E+ A VF + +M A++G
Sbjct: 173 AVDQLTEMRFYIPGTETRKGRKKDQEDGADEEDEGEEEDANAANVFYETLMDKAEIGEVA 232
Query: 89 EEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFV 148
+ TF I LTPRGR+ ++L+ RL+G+ D+KI Y + R F+LPK + H+ +
Sbjct: 233 GDTFATFLDILHLTPRGRFDIDLYEKSFRLRGKTYDYKISYDNAKRFFVLPKPDDVHSLL 292
Query: 149 VVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFT 208
+ LDPP+R+GQT YP IV+QF+ D V EL M+++ L TKY KL+P Y+ I V
Sbjct: 293 CIGLDPPLRQGQTRYPFIVMQFKRDEEVNIELNMTDDALQTKYAGKLQPRYEAPIGTVIA 352
Query: 209 TILRGLSGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEI 267
I GL+G K+ +P F S VK S+KA +G LY L+++F F+PKP T I E +
Sbjct: 353 RIFHGLTGKKLFQPSPLFVSHHQQSGVKCSIKANEGHLYCLDRAFLFVPKPATYISFENV 412
Query: 268 DYVEFERHAAGGSNMHYFDLLIRLKT-EQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGD 326
+ R S FD+ + L+ EH F NI R E + L +F KGLK N D
Sbjct: 413 AVITMSRVGGAVSASRTFDITVALRNGAGEHQFSNINREEQNPLEEFFKAKGLKTKNEMD 472
Query: 327 MKTTDGVAAVLQEDDDDA 344
+ + +AA L D D A
Sbjct: 473 -EDSRMMAAALSADPDLA 489
>gi|325184576|emb|CCA19069.1| FACT complex subunit SSRP1 putative [Albugo laibachii Nc14]
Length = 620
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 135/352 (38%), Positives = 199/352 (56%), Gaps = 34/352 (9%)
Query: 2 LTFM-VGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
LTF V E+ L +SQ L GKN+V L+FH DDT +E ++L+E+ ++P S T
Sbjct: 173 LTFQDVKSASILEIPLESISQCALPGKNEVELQFHEDDTVAGDE-ETLVEMRLYLPPSGT 231
Query: 61 QFVG------DENHPPA-------------QVFRDKIMSMADV-GAGGEEAVVTFEGIA- 99
+G DE PA + FRD+++ A++ G+ V E I
Sbjct: 232 --IGSSMQDEDEAENPARKDSSQSEMLYSAEAFRDEVLHRANIRNVTGKSIVELDESIGT 289
Query: 100 ILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKG 159
LTPRGRY VE++ SFLR+ G+ D+KI YS++ R FLL N +T V++L+ PIR+G
Sbjct: 290 FLTPRGRYGVEIYGSFLRMHGKTFDYKIMYSNINRCFLLELPNGLNTAFVISLEEPIRQG 349
Query: 160 QTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKI 219
+ YPH+VLQ + V L ++E+ KY + G + ++ TI + + G K+
Sbjct: 350 KQGYPHLVLQLSKEDVHIDVNLSTQEI--QKYNGNIHERMSGALPQIVATIFKFVIGKKV 407
Query: 220 TKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHA--A 277
GKF++ A+K ++KA+ GVL+PLEKSF F+ KP T I +EEI++VEF+R+A A
Sbjct: 408 YTSGKFKTHSGDRALKCAVKAQSGVLFPLEKSFMFIHKPTTFIRYEEIEFVEFQRYAGQA 467
Query: 278 GGSNMHYFDLLIRLKT-----EQEHLFRNIQRNEYHNLFDFISGKGLKIMNL 324
G + FDLL+ K+ +E LF I R E+ L F+S K L+I NL
Sbjct: 468 GSTASRNFDLLVSCKSVGSEPAREILFSAIDRREFPELSQFLSSKKLRIRNL 519
>gi|42733470|dbj|BAD11332.1| BRI1-KD interacting protein 104 [Oryza sativa Japonica Group]
Length = 223
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 142/227 (62%), Positives = 174/227 (76%), Gaps = 8/227 (3%)
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMK-TTDGVAAVLQEDDDDAVDPHLERIKNEAGGD 359
NIQR+EYHNLF+FI+GK LKIMNLGD + T GV AVL++ DDDAVDPHLERIKN+AG +
Sbjct: 1 NIQRSEYHNLFNFINGKHLKIMNLGDGQGATGGVTAVLRDTDDDAVDPHLERIKNQAGDE 60
Query: 360 ESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSSVKASTSKKK 419
ESDEED DFVADKDD GSPTDDSG EDSDASESGGEKEK +KKE+ SSS K K
Sbjct: 61 ESDEEDEDFVADKDDSGSPTDDSGGEDSDASESGGEKEKLSKKEA---SSSKPPVKRKPK 117
Query: 420 SRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERW 479
RD +E K+K KKKKDPNAPKRAM+ F++FS ER N+K +NP + T++ + LGE W
Sbjct: 118 GRD-EEGSDKRKPKKKKDPNAPKRAMTPFMYFSMAERGNMKNNNPDLPTTEIAKKLGEMW 176
Query: 480 KKMSVEEREPYESKARADKKRYKDEISGYKNPKPMDIDS---GNESD 523
+KM+ EE++PY +++ DKKRY+ E + Y+ MD+DS GNESD
Sbjct: 177 QKMTGEEKQPYIQQSQVDKKRYEKESAVYRGAAAMDVDSGSGGNESD 223
>gi|367012760|ref|XP_003680880.1| hypothetical protein TDEL_0D00850 [Torulaspora delbrueckii]
gi|359748540|emb|CCE91669.1| hypothetical protein TDEL_0D00850 [Torulaspora delbrueckii]
Length = 540
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 130/424 (30%), Positives = 219/424 (51%), Gaps = 33/424 (7%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQ 61
+ F V K +FEV A ++ T L KN+V +EF++ D D ++E+ F+IP
Sbjct: 123 MIFAVNGKPSFEVPYARINNTNLTSKNEVAIEFNIQDEQYQPAGDEMVEMRFYIPGQ--- 179
Query: 62 FVGDENH----------------------PPAQVFRDKIMSMADVGAGGEEAVVTFEGIA 99
V DEN A+ F +++ ADVG +++V+F+ +
Sbjct: 180 -VEDENEDEMPKKEDGEDVEMTKEPKEKKTMAEAFHEELKEKADVGEVAGDSIVSFQDVF 238
Query: 100 ILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKG 159
TPRGRY ++++ + +RL+G+ ++K+Q+ + R+ LPK++ H +V++++PP+R+G
Sbjct: 239 FATPRGRYDIDIYKNSIRLRGKTYEYKLQHRQIQRIVSLPKADDIHHLIVLSIEPPLRQG 298
Query: 160 QTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKI 219
QT YP +V+QF+ D + +L + +E + YK+KL Y H V + +L+GL+G ++
Sbjct: 299 QTTYPFLVMQFQKDEETEVQLNLEDEDFDANYKEKLMKQYDAKTHIVISHVLKGLTGKRV 358
Query: 220 TKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGG 279
PG ++S D AV S KA +G LYPL+ +FFFL KP I ++ V R
Sbjct: 359 IVPGAYKSKYDQCAVSCSYKANEGYLYPLDNAFFFLTKPTLYIPFSDVSSVNISRAGQTS 418
Query: 280 SNMHYFDLLIRLKTEQ-EHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQ 338
++ FDL I L++ + F NI + E L F+ K L++ N D + + + + L
Sbjct: 419 TSSKTFDLEILLRSNRGSTTFANISKEEQQLLEQFLKSKNLRVKN-EDKEAQERLQSALG 477
Query: 339 EDDDDAVDPHLERIKNEAGGDESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEK 398
D DD + I A DE ++ + +DD + +S SD G E+
Sbjct: 478 SDSDDE-----DVIMGSAAEDEESFDEEFHASSEDDDIAEEFNSDAASSDEEGEGSGSER 532
Query: 399 PAKK 402
P+KK
Sbjct: 533 PSKK 536
>gi|330932790|ref|XP_003303910.1| hypothetical protein PTT_16311 [Pyrenophora teres f. teres 0-1]
gi|311319777|gb|EFQ87991.1| hypothetical protein PTT_16311 [Pyrenophora teres f. teres 0-1]
Length = 577
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 149/449 (33%), Positives = 228/449 (50%), Gaps = 55/449 (12%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHV--DDTTGAN---------------E 44
LTF V + AFEV +VS T L GKN+V ++F + D GAN
Sbjct: 119 LTFNVANRPAFEVPYTEVSNTNLAGKNEVAVDFSLPADGDAGANGSLGGARFRGKKSAGA 178
Query: 45 KDSLMEISFHIP-------------NSNTQFVGDENHPPAQVFRDKIMSMADVGAGGEEA 91
+D L+E+ F+IP +++ G+E + A +F + +M A++G +
Sbjct: 179 RDQLVEMRFYIPGLASKKEKNEDGEDASGAEDGEETNA-ANLFYETLMEKAEIGEVAGDT 237
Query: 92 VVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVT 151
TF I LTPRGR+ ++++ S RL+G+ D+KIQ+ SV + +LPK + HT + +
Sbjct: 238 FATFLDILHLTPRGRFDIDMYESSFRLRGKTYDYKIQFDSVKKFMVLPKPDDMHTLITIG 297
Query: 152 LDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTIL 211
LDPP+R+GQT YP +V+QF+ D V +L M +LL KYKDKL+ Y+ I V I
Sbjct: 298 LDPPLRQGQTRYPFLVMQFKRDEEVNLDLNMKGDLLADKYKDKLQSHYEAPIATVVADIF 357
Query: 212 RGLSGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYV 270
+GLSG +IT+P + F S + VK S+KA +G L+ L+K+F F+PKP T I + I V
Sbjct: 358 KGLSGKRITRPSRDFISHHEQSGVKCSIKANEGHLFCLDKAFMFIPKPATYISMDNIASV 417
Query: 271 EFERHAAGGSNMHYFDLLIRLK-TEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKT 329
R + FD+ +K EH + E L +F KG+K N +M
Sbjct: 418 TMSRVGGAMAASRTFDITFTMKHGMAEH------QEEQQPLENFFRAKGIKTKN--EMAD 469
Query: 330 TDG--VAAVLQEDDDDAVDPHLERIKNEAG-----------GDESDEEDSDFVADKDDGG 376
G +AA LQ++D + D + A D E +F +D G
Sbjct: 470 DSGAILAAALQDEDLASSDDGQPANRGSADEDDESVDEDFQADSESEVGEEFDSDHQSSG 529
Query: 377 SPTDDSGEEDSDASESGGEKEKPAKKESK 405
S + D+ ED+++ + E+P KK+ +
Sbjct: 530 SDS-DAEMEDAESDTAEAVPERPKKKQKR 557
>gi|343425699|emb|CBQ69233.1| probable POB3-protein that binds to DNA polymerase I [Sporisorium
reilianum SRZ2]
Length = 557
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 138/433 (31%), Positives = 227/433 (52%), Gaps = 39/433 (9%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEF------------HVDDTTGANEK---- 45
+ F+V K AFE+ L+ ++ + + K +V +EF D G +
Sbjct: 129 VQFLVRDKLAFELPLSHLANSNI-AKTEVSMEFLNPEQQQPGANTGSSDANGTKSRRSKG 187
Query: 46 DSLMEISFHIPNSNTQFV------------GDENHPPAQVFRDKIMSMADVGAGGEEAVV 93
D L+E+ ++P ++ + A+ F + + S AD+G +++V
Sbjct: 188 DQLVEMRLYVPGQASKDDASDAGSAADADDNNNEETAAEAFHEALKSKADIGQVAGDSIV 247
Query: 94 TFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLD 153
F+ + +LTPRGRY +++ +F+RL+G+ D+KI YSS+ +LFLLPK+++ H +V+ LD
Sbjct: 248 VFKEVLVLTPRGRYDIDVFNTFIRLRGKTYDYKILYSSMNKLFLLPKADEIHVMLVIGLD 307
Query: 154 PPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRG 213
PPIR+GQT YP++VLQF + + +EL + E+ + KY KL+ Y+ + T I +
Sbjct: 308 PPIRQGQTRYPYLVLQFPREEEMDAELNLDEQTIQEKYDGKLKKRYEEPTFRIVTNIFKV 367
Query: 214 LSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFE 273
LSG K+ P F S+ ++K ++KA DG LYPLEKS ++ K P + + EI
Sbjct: 368 LSGQKVATPTDFESSSGQTSIKCNVKAADGNLYPLEKSLLWVSKQPVYVPYSEIHQAILS 427
Query: 274 RHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMN-LGDMKTTDG 332
R ++ FDL + K+ +H F++I R E L +++ + ++I N + +
Sbjct: 428 RVGGAVASSKTFDLHVATKSGTDHTFQSISREELDRLKAWLADRKVRIKNEMAEETGGLA 487
Query: 333 VAAVLQEDDDDAVDPHLERIKNEAGGDESDEEDSD--FVADKD-DGGSPTDDSGEEDSDA 389
AA DD E + AG DE ++ + D F AD D DGGSP++ S +ED D
Sbjct: 488 AAAAAGLLSDD------EEMGGAAGADEDEDSEEDADFAADSDSDGGSPSEGSSDEDEDG 541
Query: 390 SESGGEKEKPAKK 402
E+P KK
Sbjct: 542 GYEDEGDERPKKK 554
>gi|449549244|gb|EMD40210.1| hypothetical protein CERSUDRAFT_112414 [Ceriporiopsis subvermispora
B]
Length = 618
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 149/424 (35%), Positives = 229/424 (54%), Gaps = 39/424 (9%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEK---DSLMEISFHIPNS 58
L F+V K AFE+ L +V+ + + G+ +V LEF + K D ++EI F++P +
Sbjct: 115 LAFVVSNKTAFELPLTNVANSNIAGRTEVSLEFAAPSNSKKPSKGAPDEMVEIRFYVPGT 174
Query: 59 NTQFVG------------DENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGR 106
+T+ +E AQ F D + A++G + +++FE + +LTPRGR
Sbjct: 175 HTRSARGSDAGSQKSDDEEEEISAAQAFHDTVKEKAEIGQVSADVILSFEEVLVLTPRGR 234
Query: 107 YSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHI 166
Y V++ FLRL+G+ D+KI YSS+ RLFLLPK +Q H ++ L PIR+GQT Y ++
Sbjct: 235 YDVDMFREFLRLRGKTYDYKIMYSSISRLFLLPKDDQ-HVLFILGLSNPIRQGQTRYQYL 293
Query: 167 VLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFR 226
V+Q+ + + +EL M EE + KY D+L+ +Y+ EV + + R LSG KI G F+
Sbjct: 294 VMQYSREEEITAELNMEEEEV-AKY-DRLKKNYEDPTFEVVSGVFRALSGKKIIGAGSFQ 351
Query: 227 SAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAA--GGSNMHY 284
S +K++LKA G L+ LEK FF+ K PTLI +I V F R A G +
Sbjct: 352 SHNGHPGIKANLKAVQGDLFMLEKFIFFVSKQPTLIELSDIHQVVFSRLGAGLGATAART 411
Query: 285 FDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDD--- 341
FDL I K+ E+ F +I + E+ ++ K +K+ N +M + + +ED+
Sbjct: 412 FDLKIVTKSGPEYTFTSINKEEHEGTEAYLRDKKVKVKN--EMMEGELIMGGDEEDEEMQ 469
Query: 342 ------DDAVDPHLERIKNEAGGDESDEEDSDFVADKDDGGSPT--DDSGEEDSDASESG 393
++A P L G DE EED DF A D GSPT D+S + AS++
Sbjct: 470 SVASSGEEAPKPRL------GGDDEDSEEDEDFQASDSDSGSPTESDESDSGAATASDAS 523
Query: 394 GEKE 397
G++E
Sbjct: 524 GDRE 527
>gi|401624461|gb|EJS42518.1| pob3p [Saccharomyces arboricola H-6]
Length = 552
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 131/436 (30%), Positives = 221/436 (50%), Gaps = 45/436 (10%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQ 61
+ F + K FE+ A ++ T L KN+V +EF++ D D L+E+ F+IP Q
Sbjct: 123 MVFALNGKPTFEIPYARINNTNLTSKNEVGIEFNIQDEEYQPAGDELVEMRFYIPGV-IQ 181
Query: 62 FVGDENHPP------------------------------AQVFRDKIMSMADVGAGGEEA 91
DEN A+ F +++ AD+G +A
Sbjct: 182 TNVDENMTKKEEPSDGVMRKKEDGAEGESVEAAVEEKSMAEAFYEELKEKADIGEVAGDA 241
Query: 92 VVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVT 151
+V+F+ + TPRGRY ++++ + +RL+G+ ++K+Q+ + R+ LPK++ H +V+
Sbjct: 242 IVSFQDVFFTTPRGRYDIDIYKNSIRLRGKTYEYKLQHRQIQRIVSLPKADDIHHLLVLA 301
Query: 152 LDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTIL 211
++PP+R+GQT YP +VLQF+ D + +L + +E YK+KL+ Y H V + +L
Sbjct: 302 IEPPLRQGQTTYPFLVLQFQKDEETEVQLNLEDEDYEENYKEKLKKQYDAKTHIVLSHVL 361
Query: 212 RGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVE 271
+GL+ ++ PG+++S D AV S KA +G LYPL+ +FFFL KP I ++ V
Sbjct: 362 KGLTDRRVIVPGEYKSKYDQCAVSCSFKANEGYLYPLDNAFFFLTKPTLYIPFSDVSMVN 421
Query: 272 FERHAAGGSNMHYFDLLIRLKTEQ-EHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTT 330
R ++ FDL + L++ + F NI + E L F+ K L++ N D
Sbjct: 422 ISRAGQTSTSSRTFDLEVVLRSNRGSTTFANISKEEQQLLEQFLKSKNLRVKN-EDRDVQ 480
Query: 331 DGVAAVLQEDDDDAVDPHLERIKNEAGGDESDEEDSDFVADKDDGGSPTDDSGEEDSDA- 389
+ + L D D+ E I + G++ + D DF D+ + E DSDA
Sbjct: 481 ERLQTALGSDSDE------EDINMGSAGEDDESVDEDFQVSSDNDAEEV--AEEFDSDAA 532
Query: 390 ---SESGGEKEKPAKK 402
+E G ++E+P+KK
Sbjct: 533 LSNAEEGSDEERPSKK 548
>gi|345564713|gb|EGX47673.1| hypothetical protein AOL_s00083g181 [Arthrobotrys oligospora ATCC
24927]
Length = 581
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 121/358 (33%), Positives = 187/358 (52%), Gaps = 36/358 (10%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEK-----------DSLME 50
L F V K AFE+ ++S + L GK +V +EF AN D LME
Sbjct: 119 LFFNVNNKPAFEIPFDEISNSNLAGKAEVAIEFADKSDLEANASGKKNKKVFAGVDQLME 178
Query: 51 ISFHIPNSNTQFVGD------------------------ENHPPAQVFRDKIMSMADVGA 86
+ F+IP + GD E A+VF D +++ AD+G
Sbjct: 179 MRFYIPGMPEKGDGDDEDNESKAGSEDEADDDGEGKKKKEARTAAEVFYDTLVTKADIGD 238
Query: 87 GGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHT 146
++ F I LTPRGRY V+++ + RL+G+ D+KI Y +V + FLLPK H
Sbjct: 239 VAGDSFAIFPSILFLTPRGRYDVDMYEASFRLRGKTYDYKIPYENVKKFFLLPKPGDMHH 298
Query: 147 FVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEV 206
+V+ L+P +++GQT YP +VLQF+ D + +L +SE L K++++L+ Y+ H V
Sbjct: 299 LLVLGLEPALQQGQTKYPFLVLQFQQDEELTCDLNISEADLENKFQNRLQMHYENSAHLV 358
Query: 207 FTTILRGLSGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHE 265
++I +G++G K+T P K F S Y VK SLKA +G L+ L+K+ F+PKP + +
Sbjct: 359 LSSIFKGVTGKKMTTPSKDFTSYNQQYGVKCSLKANEGNLFFLDKALLFVPKPAIYVSFD 418
Query: 266 EIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMN 323
+ +V R S FD+ +++ + EH F NI R E +L +F +G+KI N
Sbjct: 419 HVQFVTLSRLGGQVSASRTFDVTVKMSSGSEHQFNNINREEQASLENFFKARGVKIKN 476
>gi|189202332|ref|XP_001937502.1| FACT complex subunit pob3 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187984601|gb|EDU50089.1| FACT complex subunit pob3 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 582
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 151/450 (33%), Positives = 229/450 (50%), Gaps = 55/450 (12%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHV--DDTTGAN---------------E 44
LTF V + AFEV +VS T L GKN+V ++F + D GAN
Sbjct: 142 LTFNVANRPAFEVPYTEVSNTNLAGKNEVAVDFSLPTDGDAGANGSLGGARFRGKKSAGA 201
Query: 45 KDSLMEISFHIP-------------NSNTQFVGDENHPPAQVFRDKIMSMADVGAGGEEA 91
+D L+E+ F+IP +++ G+E + A +F + +M A++G +
Sbjct: 202 RDQLVEMRFYIPGLASKKEKNEDGEDASGAEDGEETNA-ANLFYETLMEKAEIGEVAGDT 260
Query: 92 VVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVT 151
TF I LTPRGR+ ++++ S RL+G+ D+KIQ+ SV + +LPK + HT + +
Sbjct: 261 FATFLDILHLTPRGRFDIDMYESSFRLRGKTYDYKIQFDSVKKFMVLPKPDDMHTLITIG 320
Query: 152 LDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTIL 211
LDPP+R+GQT YP +V+QF+ D V +L M +LL KYKDKL+ Y+ I V I
Sbjct: 321 LDPPLRQGQTRYPFLVMQFKRDEEVNLDLNMKGDLLEEKYKDKLQSHYEAPIATVVADIF 380
Query: 212 RGLSGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYV 270
+GLSG +IT+P + F S + VK S+KA +G L+ L+K+F F+PKP T I + I V
Sbjct: 381 KGLSGKRITRPSRDFISHHEQSGVKCSIKANEGHLFCLDKAFMFIPKPATYISMDNIASV 440
Query: 271 EFERHAAGGSNMHYFDLLIRLK-TEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKT 329
R + FD+ +K EH + E L +F KG+K N +M
Sbjct: 441 TMSRVGGAMAASRTFDITFTMKHGMAEH------QEEQQPLENFFRAKGIKTKN--EMAD 492
Query: 330 TDG--VAAVLQEDDDDAVDPHLERIKNEAG-----------GDESDEEDSDFVADKDDGG 376
G +AA LQ++D + D + A D E +F +D G
Sbjct: 493 DSGAILAAALQDEDLASSDDGQPANRGSADEDDESVDEDFQADSESEVGEEFDSDHQSSG 552
Query: 377 SPTDDSGEE-DSDASESGGEKEKPAKKESK 405
S +D E+ +SD +E+ E+ K +K S+
Sbjct: 553 SDSDAEMEDAESDMAEAVPERPKKKQKVSQ 582
>gi|302406072|ref|XP_003000872.1| FACT complex subunit pob-3 [Verticillium albo-atrum VaMs.102]
gi|261360130|gb|EEY22558.1| FACT complex subunit pob-3 [Verticillium albo-atrum VaMs.102]
Length = 578
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 149/469 (31%), Positives = 242/469 (51%), Gaps = 44/469 (9%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHV---DDTTGAN--------------- 43
L+F V + AFEV +++S T L G+N+V +EF ++ TG N
Sbjct: 117 LSFNVQNRPAFEVPYSEISNTNLAGRNEVAVEFAAPTDENDTGTNGTLDGARGKGKKAGA 176
Query: 44 EKDSLMEISFHIPN-----------SNTQFVGDENHPPAQVFRDKIMSMADVGAGGEEAV 92
KD L+E+ F+IP + G E +F D +M A++G +A+
Sbjct: 177 GKDQLVEMRFYIPGVAKKETDDDDAGSDAGGGQEEKNAVTLFYDTLMEKAEIGETAGDAI 236
Query: 93 VTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTL 152
F I LTPRGR+ ++++ + RL+G+ D+KIQY ++ + +LPK + H + V L
Sbjct: 237 AQFLDILHLTPRGRFDIDMYDTSFRLRGKTYDYKIQYEAIKKFMVLPKPDDAHVMLCVGL 296
Query: 153 DPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILR 212
DPP+R+GQT YP +V+QF+ D V ++ ++EE + KY DKL+ Y+ +H+V T I R
Sbjct: 297 DPPLRQGQTRYPFVVMQFKKDEEVTLDVNLTEEQIKEKYGDKLQSHYEQPLHQVITYIFR 356
Query: 213 GLSGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVE 271
GL+ K+T P K F++ ++ +K S+KA +G LY LEK+F F+PKP T I +E+ +
Sbjct: 357 GLANKKVTTPAKDFQTHRNQLGIKCSIKASEGFLYCLEKAFMFIPKPATYIAYEQTASIT 416
Query: 272 FERHAAGGSNMHYFDLLIRLKT-EQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTT 330
F R S + FD+ + +K F NI R + L F K L++ N D
Sbjct: 417 FSRVGGAVSALSTFDITVLMKNGAGSTQFSNISREDLKGLETFFKLKNLRVKNEIDEDAN 476
Query: 331 DGVAAVLQEDDDDAVDPHLERIKNEA----GGDESDEEDSDFVADKDDGGSPTDDSGEED 386
AA+ +E DD+ D E + N+A ++ + D DF AD + + DS E
Sbjct: 477 LLKAALREEAMDDSED---EVVGNKADRGSADEDEESVDEDFRADSESDVAEEYDSNPET 533
Query: 387 SDASESGGEKEKPAKKESKKESSSVKASTSKKKSRDGDEDGKKKKQKKK 435
SD+ ++ + ++++ + GD+D ++ K+KKK
Sbjct: 534 SDSEDA------ESVVDNEEGGADADDDDDDDDEAGGDDDEERPKKKKK 576
>gi|406608003|emb|CCH40630.1| FACT complex subunit [Wickerhamomyces ciferrii]
Length = 523
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 143/412 (34%), Positives = 215/412 (52%), Gaps = 25/412 (6%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGAN-EKDSLMEISFHIPNSNT 60
L F V K AFE+ A +S + L KN+V ++ +D G + D L+E+ F++P N
Sbjct: 122 LIFNVSGKPAFEIPYAQISNSNLASKNEVAID--MDPLQGNDFAGDELVEVRFYVP-GNV 178
Query: 61 QFVGD-------ENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHL 113
+ D E A F + + AD+G EA+ +F I LTPRGR+ VE++
Sbjct: 179 PYEDDDVPEDDKEEKTAASAFYENLKDKADIGQVAGEALASFNDILFLTPRGRFDVEMYR 238
Query: 114 SFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETD 173
LRL+G+ D KIQY V R+F LPK + H +V+ ++PP+R+G T YP +VLQF D
Sbjct: 239 GSLRLRGKTYDHKIQYRQVERIFSLPKPDDIHHLMVIQVNPPLRQGNTPYPFLVLQFSKD 298
Query: 174 YVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYA 233
++ E+ + ++ KY +L +Y H V + + RGL+ ++ PG F S A
Sbjct: 299 EELELEINIDDDEFQEKYSKRLNKNYDQQTHLVLSHVFRGLTERRVIIPGSFLSKHGQPA 358
Query: 234 VKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLK- 292
V SLK +G LY LE +F F+ KP I + ++ V R ++ FDL + L+
Sbjct: 359 VSCSLKVNEGYLYLLENNFLFVTKPTVYIPYNDVSSVSISRAGDSSTSNRTFDLEVNLRG 418
Query: 293 TEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERI 352
+ H F NI + E ++L F+ KG+K+ N +++ + AVL D D + +
Sbjct: 419 SPVSHTFANITKEEQNSLESFLKSKGVKVKN-DEIEQQARINAVLANDLDSS-----DSD 472
Query: 353 KNEAGGDESDEEDSDFVADKDDGGSPTD-DSGEE-DSDASESGGEKEKPAKK 402
N E + D DF +DGGS +D D EE DSDA S + E PAKK
Sbjct: 473 VNMGSASEDESPDEDF----NDGGSGSDSDLAEEFDSDAPLS-DDDEPPAKK 519
>gi|156842196|ref|XP_001644467.1| hypothetical protein Kpol_520p32 [Vanderwaltozyma polyspora DSM
70294]
gi|156115110|gb|EDO16609.1| hypothetical protein Kpol_520p32 [Vanderwaltozyma polyspora DSM
70294]
Length = 542
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 134/430 (31%), Positives = 221/430 (51%), Gaps = 43/430 (10%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQ 61
+ F + K FE+ + ++ T L KN+V +EF + D D L+E+ F+IP++ +
Sbjct: 123 MVFSLNGKPTFEIPYSRINNTNLTNKNEVAIEFDIQDENYQPAGDELVEMRFYIPDAVKE 182
Query: 62 FVGDENHPP---------------------AQVFRDKIMSMADVGAGGEEAVVTFEGIAI 100
DE P A+ F D++ AD+G + +V+F +
Sbjct: 183 -ESDEEKPKTEEGDVEMEGEEKEEKEEKSLAETFYDELKEKADIGETAGDVIVSFPDVFF 241
Query: 101 LTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQ 160
TPRGRY ++++ + +RL+G+ ++K+Q+ + R+ LPK++ + +V+ ++PP+R+GQ
Sbjct: 242 TTPRGRYDIDIYKNSIRLRGKTYEYKLQHRQIQRIVSLPKADDINHLIVLAIEPPLRQGQ 301
Query: 161 TLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKIT 220
T YP +VLQF+ + + +L + +E T YKDKL+ Y H V + IL+G++G ++
Sbjct: 302 TSYPFLVLQFQKEEETEVQLNLDDEDYETNYKDKLKKQYDAKTHIVISHILKGITGRRVI 361
Query: 221 KPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGS 280
P +++S + AV S KA +G LYPL+ +FFFL KP I +I + R A +
Sbjct: 362 VPAEYKSKYEQCAVSCSYKANEGYLYPLDNAFFFLTKPTLYIPFSDISSINISR-AGQTT 420
Query: 281 NMHYFDLLIRLKTEQ-EHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQE 339
FDL + L+ + F NI R E L ++ K L++ N + + + + L
Sbjct: 421 TSRTFDLEVILRFNRGSTTFANISREEQQILEQYLKSKNLRVRN-EEKEAQQRLQSALGS 479
Query: 340 DDDDAVDPHLERIKNEAGGDESDEEDSDFVADKDDGGSPTDDSGEE-DSDASESGGE--- 395
D +D E I + G+E + D +F DD DD EE DSD SGGE
Sbjct: 480 DSED------EDINMGSAGEEDESVDEEFHDSSDD-----DDVAEEFDSDVPSSGGEDEE 528
Query: 396 ---KEKPAKK 402
E+PAKK
Sbjct: 529 GSDSERPAKK 538
>gi|402219834|gb|EJT99906.1| SSrecog-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 597
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 136/406 (33%), Positives = 220/406 (54%), Gaps = 24/406 (5%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEF----HVDDTTGANEK----DSLMEISF 53
L F+V K FE+ L ++ + + GK +V LEF + A ++ D L+E+ F
Sbjct: 118 LAFLVATKPLFEIPLTSIANSNIAGKTEVSLEFLNPEQLKPDPAAPKRRRAGDELVEMRF 177
Query: 54 HIPNS-------NTQFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGR 106
++P + G+E AQ F + + A++G E +V F + +LTPRGR
Sbjct: 178 YVPGTVERDEGKEDDEEGEEEVSAAQAFYELVKKKAEIGQVLGEYIVEFNDVLLLTPRGR 237
Query: 107 YSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHI 166
Y +++ +F+RL+G+ D+KI ++SV RLFLLPK + H +VV LDPPI +GQT YP++
Sbjct: 238 YDLDVFPTFVRLRGKTYDYKILHTSVTRLFLLPKPDDIHIQLVVGLDPPIHQGQTRYPYL 297
Query: 167 VLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFR 226
V+QF + ++ EL + +E L KY KL+ Y + ++ + I R L+G K+ P ++
Sbjct: 298 VMQFTREDNLEVELKIDDEQLQ-KYGGKLQKEYDAPVFQIVSNIFRALTGRKLQAPSDYK 356
Query: 227 SAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFD 286
S VK+++KA G LY L+K+ F+ K P ++ + +I F R G S+ FD
Sbjct: 357 SFNGQSGVKANMKATQGDLYFLDKNLIFVAKQPAVVDYADIHTASFSRVGGGMSSAKTFD 416
Query: 287 LLIRLKTEQEHL-FRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAV 345
L I K+ L F +I + E+ + +++ GK +++ N +M+ L ED+D+
Sbjct: 417 LQITQKSSTGDLTFSSIPKEEHAKMEEYLRGKKVRVKN--EMQEELAQVVGLSEDEDEES 474
Query: 346 DPHL---ERIKNEAGGDESDEEDSDFVADKDDGGSPTDDSGEEDSD 388
+ E G++ EED+DF DGGSPT SG EDS+
Sbjct: 475 MQDVASGEDAPRRGAGEDDSEEDADFQDSDSDGGSPT--SGSEDSE 518
>gi|365986070|ref|XP_003669867.1| hypothetical protein NDAI_0D03100 [Naumovozyma dairenensis CBS 421]
gi|343768636|emb|CCD24624.1| hypothetical protein NDAI_0D03100 [Naumovozyma dairenensis CBS 421]
Length = 543
Score = 211 bits (537), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 135/431 (31%), Positives = 219/431 (50%), Gaps = 44/431 (10%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQ 61
L F + K FEV + ++ T L KN+V +EF++ + D L+E+ F+IP + T
Sbjct: 123 LIFALNGKPTFEVPYSHINNTNLTSKNEVGIEFNIQNEEYQPAGDELVEMRFYIPGTLT- 181
Query: 62 FVGD-----------------------ENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGI 98
GD E A+ F ++ AD+G +A+V+F+ +
Sbjct: 182 -TGDEEGEVPKKEEEKEGEGEDVDMEKEEKSLAEAFYGELREKADIGEVAGDAIVSFQDV 240
Query: 99 AILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRK 158
TPRGRY ++++ + +RL+G+ ++K+Q+ + R+ LPK++ H +V+ ++PP+R+
Sbjct: 241 FFATPRGRYDIDIYKNSIRLRGKTYEYKLQHRQIQRIVSLPKADDIHHLIVLAIEPPLRQ 300
Query: 159 GQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAK 218
GQT YP +VLQF+ D + +L + ++ YKDKL+ SY H V + +L+GL+ +
Sbjct: 301 GQTTYPFLVLQFQKDEETEVQLNLEDDDYEANYKDKLKKSYDAKTHVVISHVLKGLTDRR 360
Query: 219 ITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAG 278
+ PG + S D AV S KA +G LYPL+ +FFFL KP I ++ V R
Sbjct: 361 VIVPGSYTSKFDQCAVSCSYKANEGYLYPLDNAFFFLTKPTLYIPFSDVSSVNISRAGQS 420
Query: 279 GSNMHYFDLLIRLKTEQ-EHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVL 337
++ FDL + L+ + F NI + E L F+ K L++ N + +T + + L
Sbjct: 421 STSSRTFDLEVVLRLNRGSTTFGNISKEEQQLLEQFLKSKNLRVKN-EEKETQERLQNAL 479
Query: 338 QEDDDDAVDPHLERIKNEAGGDESDEEDSDFVADKDDGGSPTDDSGEE-DSDA-----SE 391
D D+ I + G++ + ED DF A S +D EE DSDA E
Sbjct: 480 GSDSDEG------DINMGSAGEDDESEDVDFHA-----SSGEEDVAEEFDSDAPVSDDEE 528
Query: 392 SGGEKEKPAKK 402
G E+P KK
Sbjct: 529 GSGSDERPTKK 539
>gi|452819554|gb|EME26610.1| structure-specific recognition protein 1 [Galdieria sulphuraria]
Length = 509
Score = 211 bits (536), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 120/314 (38%), Positives = 186/314 (59%), Gaps = 17/314 (5%)
Query: 11 AFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFVGDENHPP 70
AF+V L +VSQ Q+ ++V LEFHVDDT A + L+E+ ++ N E+H
Sbjct: 138 AFDVPLEEVSQVQMPSSSEVALEFHVDDT-AAKTDECLVELRLYVHN--------ESHA- 187
Query: 71 AQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYS 130
A +++ + S G E+++ F + +L PRGRY V+L+ + L+L G++ D+KI Y+
Sbjct: 188 ADLYKGILKSAESSFTG--ESLINFVDMPLLVPRGRYEVDLYPNHLKLHGKSFDYKILYT 245
Query: 131 SVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTK 190
+V R+FLLPK ++ H VV+LDPP+R+G TLYPH+V QF+ D V +E ++E L ++
Sbjct: 246 AVTRMFLLPKPDEAHITFVVSLDPPVRQGNTLYPHLVFQFQKDEEVDAEFALTENELKSR 305
Query: 191 YKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEK 250
Y + + S G EVF+ ILR L+ + P F+S + AV+++L A DG L+ LE
Sbjct: 306 YPNLVGVS-GGATWEVFSKILRELTKKPLHSPISFKSHRGQSAVRTALGANDGYLFFLEN 364
Query: 251 SFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNL 310
FF+ KPPT I E+++ +EF+R FDL I L + LF NI R E+ N+
Sbjct: 365 CMFFVNKPPTYIRFEDVEMIEFKRMDLE----RRFDLQITLSSGHSLLFSNIDRPEFDNI 420
Query: 311 FDFISGKGLKIMNL 324
+ F+ K L + +
Sbjct: 421 YTFLEEKRLPMSTI 434
>gi|366987573|ref|XP_003673553.1| hypothetical protein NCAS_0A06120 [Naumovozyma castellii CBS 4309]
gi|342299416|emb|CCC67170.1| hypothetical protein NCAS_0A06120 [Naumovozyma castellii CBS 4309]
Length = 543
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 134/427 (31%), Positives = 221/427 (51%), Gaps = 36/427 (8%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNS--- 58
L F + K FE+ + ++ T L KN+V +EF++ D D L+E+ F++P +
Sbjct: 123 LVFALNGKPTFEIPYSHINNTNLTSKNEVGIEFNIQDEEYQPAGDELVEMRFYLPGTIET 182
Query: 59 ----------------NTQFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILT 102
V E A+ F +++ AD+G +A+V+F+ + T
Sbjct: 183 NNEDELPKIEAEDGIKEEAAVDKEEKSLAESFYEELKEKADIGEVAGDAIVSFQDVFFAT 242
Query: 103 PRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTL 162
PRGRY ++++ + +RL+G+ ++K+Q+ + R+ LPK++ H +V+ ++PP+R+GQT
Sbjct: 243 PRGRYDIDVYKNSIRLRGKTYEYKLQHRQIQRIVSLPKADDIHHLIVLAIEPPLRQGQTT 302
Query: 163 YPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKP 222
YP +VLQF+ D + +L + +E T YKDKL+ SY H V + +L+GL+G ++ P
Sbjct: 303 YPFLVLQFQKDEETEVQLNLEDEDYETNYKDKLKKSYDAKTHVVISHVLKGLTGKRVIVP 362
Query: 223 GKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNM 282
G + S + AV S KA +G LYPL+ +FFFL KP I ++ V R ++
Sbjct: 363 GSYTSKFEQCAVSCSYKANEGYLYPLDNAFFFLTKPTLYIPFSDVSSVNISRAGQTSTSS 422
Query: 283 HYFDLLIRLKTEQ-EHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDD 341
FDL I L+ + F NI + E L F+ K L++ N + +T + + L
Sbjct: 423 RTFDLEIILRLNRGSTTFGNISKEEQQLLEQFLKSKNLRVKN-EEKETQERLQNALG--- 478
Query: 342 DDAVDPHLERIKNEAGGDESDEEDSDFVADKDDGGSPTDDSGEE-DSDA----SESGGEK 396
+ I + G++ + ED DF A + DD EE DSDA E+G +
Sbjct: 479 --SDSDDDGDINMGSAGEDDESEDVDFHASSEG----EDDVAEEFDSDAPVSDEEAGSDA 532
Query: 397 -EKPAKK 402
E+PAKK
Sbjct: 533 DERPAKK 539
>gi|410082744|ref|XP_003958950.1| hypothetical protein KAFR_0I00340 [Kazachstania africana CBS 2517]
gi|372465540|emb|CCF59815.1| hypothetical protein KAFR_0I00340 [Kazachstania africana CBS 2517]
Length = 542
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 129/427 (30%), Positives = 220/427 (51%), Gaps = 37/427 (8%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPN---- 57
+ F + K FE+ + V+ T L KN+V +EF++ D + D L+E+ F+IP
Sbjct: 123 MVFALNGKPTFEIPYSRVNNTNLTAKNEVGIEFNIQDESYQPAGDELVEMRFYIPGVIEN 182
Query: 58 -----------------SNTQFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAI 100
+ +E A+ F +++ AD+G + +V+F+ +
Sbjct: 183 DEEGIKKEGIKEEVENGEGMEVDQEEEKTIAEAFYEELKEKADIGETAGDVIVSFQDVFF 242
Query: 101 LTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQ 160
TPRGRY V+++ +RL+G+ ++K+Q+ + R+ LPK++ H +V+ ++PP+R+GQ
Sbjct: 243 ATPRGRYDVDIYKDTIRLRGKTYEYKLQHRQIQRIVSLPKADDIHHLIVLAIEPPLRQGQ 302
Query: 161 TLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKIT 220
T YP +V+QF+ D + +L + +E + YKDKL+ Y H V + +L+GL+ ++
Sbjct: 303 TTYPFLVMQFQKDEETEVQLNLEDEEYESNYKDKLKKQYDAKTHIVISHVLKGLTNRRVI 362
Query: 221 KPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGS 280
PG+++S + AV S KA +G LYPL+ +FFFL KP I ++ + R G +
Sbjct: 363 VPGEYKSKYEQSAVSCSYKANEGYLYPLDNAFFFLTKPTLYIPFSDVSAINISRAGQGST 422
Query: 281 NMHYFDLLIRLKTEQ-EHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQE 339
FDL + L++ + F NI + E L F+ K L++ N + + + L
Sbjct: 423 LSRTFDLEVVLRSNRGTTAFGNISKEEQPLLEQFLESKNLRVKN-EEKEAQTRLQNALGS 481
Query: 340 DDDDAVDPHLERIKNEAGGDESDEEDSDFVADKDDGGSPTDDSGEE-DSDASES---GGE 395
D DD E + + G++ + D DF A DD +D EE DSD S G +
Sbjct: 482 DSDD------EDLNMGSAGEDEESVDEDFQASSDD----DEDVAEEFDSDVPLSDNEGSD 531
Query: 396 KEKPAKK 402
+E+P KK
Sbjct: 532 EERPNKK 538
>gi|71020665|ref|XP_760563.1| hypothetical protein UM04416.1 [Ustilago maydis 521]
gi|74700723|sp|Q4P647.1|POB3_USTMA RecName: Full=FACT complex subunit POB3; AltName: Full=Facilitates
chromatin transcription complex subunit POB3
gi|46100451|gb|EAK85684.1| hypothetical protein UM04416.1 [Ustilago maydis 521]
Length = 558
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 142/432 (32%), Positives = 226/432 (52%), Gaps = 36/432 (8%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEF------------HVDDTTGANEK---- 45
+ F+V K AFE+ L+ ++ + + K +V +EF D G +
Sbjct: 129 VQFLVRDKLAFELPLSHLANSNI-AKTEVSMEFLNPEQQQPGANTGTSDVNGTKSRRSKG 187
Query: 46 DSLMEISFHIPNSNTQFVG-----------DENHPPAQVFRDKIMSMADVGAGGEEAVVT 94
D L+E+ ++P + G + A+ F + + S AD+G +++V
Sbjct: 188 DQLVEMRLYVPGQAIKDDGSDAASAQDDDVNNEETAAEAFHEALKSKADIGQVAGDSIVV 247
Query: 95 FEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDP 154
F+ + +LTPRGRY +++ +F+RL+G+ D+KI YSS+ +LFLLPK+++ H +V+ LDP
Sbjct: 248 FKEVLVLTPRGRYDIDVFSTFIRLRGKTYDYKILYSSMNKLFLLPKADEIHVMLVIGLDP 307
Query: 155 PIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGL 214
PIR+GQT YP++VLQF + + +EL + E+ + KY KL+ Y+ + T I + L
Sbjct: 308 PIRQGQTRYPYLVLQFPREEEMDAELNLDEQTIQEKYDGKLKKRYEEPTFRIVTNIFKVL 367
Query: 215 SGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFER 274
SG K+ P F S+ ++K ++KA DG LYPLEKS ++ K P + + EI R
Sbjct: 368 SGQKVATPTDFESSSGQTSIKCNVKAADGNLYPLEKSLLWVSKQPVYVPYSEIHQAILSR 427
Query: 275 HAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVA 334
++ FDL + K+ EH F++I R E L +++ + ++I N +T A
Sbjct: 428 VGGAVASSKTFDLRVATKSGTEHTFQSISREELDRLKAWLADRKVRIKNEMAEETGGLAA 487
Query: 335 AVLQEDDDDAVDPHLERIKNEAGG---DESDEEDSDFVADKD-DGGSPTDDSGEEDSDAS 390
A D D + AGG DE EED+DF AD D DGGSP++ S +E
Sbjct: 488 AAAAGLLSDDDDEEM----GAAGGADEDEDSEEDADFAADSDSDGGSPSEASSDEGEGGG 543
Query: 391 ESGGEKEKPAKK 402
E+P KK
Sbjct: 544 YDDEGDERPKKK 555
>gi|392591558|gb|EIW80885.1| SSrecog-domain-containing protein [Coniophora puteana RWD-64-598
SS2]
Length = 621
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 154/424 (36%), Positives = 225/424 (53%), Gaps = 33/424 (7%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGA---NEKDSLMEISFHIPNS 58
L F+V K +FE+ L V+ + + G+ +V LEF G N D ++EI FH+P +
Sbjct: 115 LAFLVSNKTSFELPLGQVANSNIAGRTEVSLEFTSSSNHGKKSRNAPDEMVEIRFHVPGT 174
Query: 59 NTQFVGDE------------NHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGR 106
+T+ G + AQVF + I AD+G + V++F+ + ILTPRGR
Sbjct: 175 STRVKGSDAGSDVEEEEEEEEMSAAQVFHEAIKEKADIGQVMGDLVLSFDDVLILTPRGR 234
Query: 107 YSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHI 166
Y +++ L FLRL+G+ D+KI YSS+ RLFLLPK + H ++ L PIR+GQT Y ++
Sbjct: 235 YDLDMFLDFLRLRGKTYDYKISYSSIARLFLLPKDDL-HVLFILGLANPIRQGQTRYSYL 293
Query: 167 VLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFR 226
V+QF + +EL M+EE + KY D+L+ Y+ EV + + R LS KI G F+
Sbjct: 294 VMQFAREEETTAELNMAEEDIE-KY-DRLKKHYEDPTFEVVSGVFRALSQKKIIGSGSFQ 351
Query: 227 SAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAA--GGSNMHY 284
S +K++LKA G L+ LEK FF+ K PTLI ++ F R A G +
Sbjct: 352 SRAGLPGIKANLKAVQGDLFMLEKYIFFVSKQPTLIELADVHQCVFSRVGASMGATAART 411
Query: 285 FDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMN--LGDMKTTDGVAAVLQEDDD 342
FDL I K+ E+ F +I + E+ ++ K +KI N + D+ V +DD+
Sbjct: 412 FDLKIVTKSGPEYTFTSINKEEHEPTEGYLKDKKIKIKNEMVPDVDMMLAAGGVDSDDDE 471
Query: 343 --DAVDPHLERIKNEAGG-DESDEEDSDFVADKDDGGSPTDDSGEEDSD------ASESG 393
ER K G DE EED DF A D GSP+D E DSD AS++
Sbjct: 472 MQSVASSGDERPKPRLGAEDEDSEEDEDFQASSTDEGSPSDT--ESDSDGGGGETASDAS 529
Query: 394 GEKE 397
G++E
Sbjct: 530 GDRE 533
>gi|116191855|ref|XP_001221740.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88181558|gb|EAQ89026.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 540
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 137/424 (32%), Positives = 218/424 (51%), Gaps = 50/424 (11%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANE---------------KD 46
++F V + AFE+ +++S T L G+N++ +EF V D +N +D
Sbjct: 98 ISFNVQNRPAFEIPYSEISNTNLAGRNEIAVEFSVADAGKSNGQNGATPGKGKKAAAGRD 157
Query: 47 SLMEISFHIPNSNTQ----------FVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFE 96
L E+ F+IP + T+ V +E +F D ++ AD+G + + TF
Sbjct: 158 QLTEMRFYIPGTTTRKEAEGSNAGSGVDEEEKSAVTLFYDTLIEKADIGETAGDTIATFL 217
Query: 97 GIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPI 156
+ LTPR SV L+F L + V + +LPK + H + + LDPP+
Sbjct: 218 DVLHLTPR---SVAPTLTFFCL--------VSNGRVEKFMVLPKPDDTHFMLCIGLDPPL 266
Query: 157 RKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSG 216
R+GQT YP +++QF+ D V +L ++EE LN KYKDKL+P Y+ +H+V I +GL+
Sbjct: 267 RQGQTRYPFLIMQFKQDEEVTLDLNLAEEELNGKYKDKLQPHYEQPLHQVVAYIFKGLAN 326
Query: 217 AKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERH 275
KIT P K F + + Y +K S+KA +G LY LEK+F F+PKP T I +++ + F R
Sbjct: 327 KKITAPAKDFTTHRQQYGIKCSIKASEGFLYCLEKAFMFVPKPATYISYDQTQSITFSRV 386
Query: 276 AAGGSNMHYFDLLIRLKT-EQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVA 334
S + FD+ + +K+ F NI R + L DF KGL++ N D +TT +A
Sbjct: 387 NGAVSALSTFDITVHMKSGAGSSQFSNINREDLKALEDFFKLKGLRVKNEIDEETTL-MA 445
Query: 335 AVLQEDDDDAVDPHLERIKNEAGGDES----------DEEDSDFVADKDDGGSPTDDSGE 384
A L+++ + D + K + G + + +SD VA++ D +D SG
Sbjct: 446 AALRDEAMASSDEEVVGAKADRGSADEDEESVDEDFRSQTESD-VAEEYDSNHESDGSGS 504
Query: 385 EDSD 388
+SD
Sbjct: 505 AESD 508
>gi|336370130|gb|EGN98471.1| hypothetical protein SERLA73DRAFT_109982 [Serpula lacrymans var.
lacrymans S7.3]
gi|336382900|gb|EGO24050.1| hypothetical protein SERLADRAFT_450341 [Serpula lacrymans var.
lacrymans S7.9]
Length = 643
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 129/341 (37%), Positives = 193/341 (56%), Gaps = 23/341 (6%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDT---TGANEKDSLMEISFHIPNS 58
L F+V K +FE+ L V+ + + G+ +V LEF + + D ++EI F++P +
Sbjct: 115 LAFLVSNKTSFELPLRQVANSNIAGRTEVSLEFAPSSSGKKPSRSAPDEMVEIRFYVPGT 174
Query: 59 NTQFVG-------------DENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRG 105
+ + G DE AQ F D I AD+G + V++FE + +LTPRG
Sbjct: 175 HARQRGSDAGSEKSDVEEEDEETSAAQAFHDAIKDKADIGQVTGDLVLSFEEVLVLTPRG 234
Query: 106 RYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPH 165
RY V++ L FLRL+G+ D+KI YSS+ RLFLLPK +Q H ++ L PIR+GQT Y +
Sbjct: 235 RYDVDMFLDFLRLRGKTYDYKILYSSISRLFLLPKDDQ-HVLFILGLSTPIRQGQTRYQY 293
Query: 166 IVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKF 225
+V+QF + +EL MSEE + TKY D+L+ +Y+ EV + + R LS KI G F
Sbjct: 294 LVMQFAREEETTAELNMSEEDI-TKY-DRLKKNYEDPTFEVVSGVFRALSKKKIIGSGSF 351
Query: 226 RSAQDGY-AVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAA--GGSNM 282
S++DG+ +K++LKA G L+ LEK FF+ K PTL+ +I F R A G +
Sbjct: 352 -SSRDGHPGIKANLKAVQGDLFMLEKYIFFVSKQPTLVELSDIHQCVFSRVGASMGATAA 410
Query: 283 HYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMN 323
FDL I K+ E+ F +I + E+ ++ K +KI N
Sbjct: 411 RTFDLKIVTKSGPEYTFTSINKEEHEPTESYLKDKKIKIKN 451
>gi|403216159|emb|CCK70657.1| hypothetical protein KNAG_0E04040 [Kazachstania naganishii CBS
8797]
Length = 544
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/425 (31%), Positives = 219/425 (51%), Gaps = 32/425 (7%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIP----- 56
L F + K FE+ + ++ T L KN+V +EF++ D D L+E+ F+IP
Sbjct: 124 LVFALNGKPTFEIPYSRINNTNLTAKNEVGIEFNLQDENYQPAGDELVEMRFYIPGVIAD 183
Query: 57 NSNTQFV-----GDENHPP----AQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRY 107
N + GD P A+ F +++ AD+G + +V+F+ I TPRGRY
Sbjct: 184 NETDGSIPAAAEGDSQTPTEKTVAESFYEELRERADIGETAGDVIVSFQDIFFATPRGRY 243
Query: 108 SVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIV 167
V+++ +RL+G+ ++K+QY + R+ LPK++ H +V+ +DPP+R+GQT YP +V
Sbjct: 244 DVDIYKDTIRLRGKTYEYKLQYRQIQRIVSLPKADDIHHLLVLAIDPPLRQGQTSYPFLV 303
Query: 168 LQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRS 227
LQF+ + + +L + ++ YKDKL+ Y H V + +L+GL+ ++ PG+++S
Sbjct: 304 LQFQNEEETEVQLNIDDDEYEAHYKDKLKKHYDAKTHIVISHVLKGLTDRRVIIPGEYKS 363
Query: 228 AQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDL 287
+ AV S KA +G LYPL+ +FFFL KP I ++ V R ++ FDL
Sbjct: 364 KYEQCAVSCSYKANEGYLYPLDNAFFFLTKPTLYIPFSDVSSVNISRAGQTSTSARTFDL 423
Query: 288 LIRLKTEQ-EHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVD 346
+ L+ + F NI + E L F+ KGL++ N + + + + L D D+ D
Sbjct: 424 EVVLRMNRGSTTFGNISKEEQQLLEQFLKSKGLRVKN-EEKEAQERLQTALGSDSDEDGD 482
Query: 347 PHLERIKNEAGGDESDEEDSDFVADKDDGGSPTDDSGEEDSDASE---------SGGEKE 397
I + G++ + D DF GG D + E +SDAS SG
Sbjct: 483 -----INMGSAGEDDESVDEDFHVSS--GGEDDDVAEEFNSDASMSDDGDDAELSGDGSN 535
Query: 398 KPAKK 402
+P+KK
Sbjct: 536 RPSKK 540
>gi|255714278|ref|XP_002553421.1| KLTH0D16390p [Lachancea thermotolerans]
gi|238934801|emb|CAR22983.1| KLTH0D16390p [Lachancea thermotolerans CBS 6340]
Length = 536
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 130/431 (30%), Positives = 219/431 (50%), Gaps = 51/431 (11%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQ 61
+ F K FE+ A +S T L K +V +EF + D ++E+ FH+P + Q
Sbjct: 123 MVFAYNGKPTFEIPYAHISNTNLTAKTEVAIEFDLTKEDYNPAGDEMVEMRFHVPGT-IQ 181
Query: 62 FVGDENHP----------------PAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRG 105
DEN P A+ F +++ AD+G +A+V+F+ + TPRG
Sbjct: 182 EEQDENAPKAEGQEDVDMEKEQKSAAESFYEELKEKADIGEVSGDAIVSFQDVFFTTPRG 241
Query: 106 RYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPH 165
RY ++++ + +RL+G+ ++K+Q + R+F LPK++ H +V++++PP+R+GQT YP
Sbjct: 242 RYDIDIYKNSIRLRGKTYEYKLQLRQIQRIFSLPKADDIHHLMVLSIEPPLRQGQTSYPF 301
Query: 166 IVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKF 225
+V+QF+ + +L + +E YKDKL Y H V + +L+GL+G ++ PG++
Sbjct: 302 LVIQFQRSEETEVQLNVEDEEFEKLYKDKLMKQYDAQTHVVLSHVLKGLTGRRVIVPGQY 361
Query: 226 RSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYF 285
+S + AV S KA +G LYPL+ +F FL KP + ++ V R ++ F
Sbjct: 362 KSKYEQCAVSCSFKANEGYLYPLDNAFLFLTKPTLYMPFGDVSMVNISRAGKTTTSARTF 421
Query: 286 DLLIRLKTEQ-EHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDA 344
DL + +++ F NI + E L +F+ K L++ N ++ DA
Sbjct: 422 DLEVVMRSNSGSTTFANISKEEQQLLENFLKSKNLRVKN----------------EEKDA 465
Query: 345 VDPHLERIKNEAGGDESDEE-------DSDFVADKDDGGSPTDDSGEE-DSDASESG--- 393
+R++N G D +DE+ + D D+D S DD EE DSDA S
Sbjct: 466 ----QQRLENALGSDSNDEDINMGSAAEDDESVDEDFQASSEDDVAEEFDSDAPPSDSDG 521
Query: 394 --GEKEKPAKK 402
G+ + P+KK
Sbjct: 522 DEGDSQGPSKK 532
>gi|45190743|ref|NP_984997.1| AER138Cp [Ashbya gossypii ATCC 10895]
gi|74693527|sp|Q756X6.1|POB3_ASHGO RecName: Full=FACT complex subunit POB3; AltName: Full=Facilitates
chromatin transcription complex subunit POB3
gi|44983722|gb|AAS52821.1| AER138Cp [Ashbya gossypii ATCC 10895]
gi|374108220|gb|AEY97127.1| FAER138Cp [Ashbya gossypii FDAG1]
Length = 542
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 125/416 (30%), Positives = 219/416 (52%), Gaps = 34/416 (8%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQ 61
L F + K FE+ + +S T L KN+V LEF + D L+E+ ++P TQ
Sbjct: 123 LIFSLNGKPTFEIPYSHISNTNLTSKNEVALEFDLQKDGYNPAGDELVEMRLYVPGVVTQ 182
Query: 62 FVGDENHPPAQ------------------VFRDKIMSMADVGAGGEEAVVTFEGIAILTP 103
D + PA+ F +++ + A++G +A+++F+ + TP
Sbjct: 183 --EDRHSSPAEDADVDMEKDNKEEKSIAEAFYEELRAKAEIGEVSGDAIISFQDVFFTTP 240
Query: 104 RGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLY 163
RGRY ++++ + +RL+G+ ++K+Q+ + R+F LPK++ H +V++++PP+R+GQT Y
Sbjct: 241 RGRYDIDIYKNSIRLRGKTYEYKLQHRQIQRIFSLPKADDIHHLMVLSIEPPLRQGQTTY 300
Query: 164 PHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPG 223
P++VLQF+ D + +L + ++ YKDKL+ Y H V + +L+GL+ ++ PG
Sbjct: 301 PYLVLQFQKDEETEVQLNVEDDEFERLYKDKLKKQYDAKTHVVLSHVLKGLTDTRVVVPG 360
Query: 224 KFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMH 283
+++S + AV S KA +G LYPL+ +F FL KP I +++ V R ++
Sbjct: 361 EYKSKHEQCAVSCSFKANEGHLYPLDNAFMFLTKPTLYIPFQDVSSVNISRAGQATTSSR 420
Query: 284 YFDLLIRLKTEQ-EHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDD 342
FDL + L++ + F NI + E L F+ K +++ N + +T + L D +
Sbjct: 421 TFDLEVVLRSNRGSTTFANISKEEQQILESFLKSKNVRVKN-EEKETQQRLQTALGSDSE 479
Query: 343 DAVDPHLERIKNEAGGDESDEEDSDFVADKDDGGSPTDDSGEE-DSDASESGGEKE 397
D E + + ++ + D DF A+ +D DD EE DSDA S E E
Sbjct: 480 D------EDVNMGSAAEDDESVDEDFQAESED-----DDVAEEFDSDAGVSESETE 524
>gi|308498523|ref|XP_003111448.1| hypothetical protein CRE_03995 [Caenorhabditis remanei]
gi|308240996|gb|EFO84948.1| hypothetical protein CRE_03995 [Caenorhabditis remanei]
Length = 702
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 157/529 (29%), Positives = 265/529 (50%), Gaps = 40/529 (7%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQ 61
+ F ++ FE+ +VSQ + KN+ ILEFH ++ SLME+ ++P
Sbjct: 116 ILFSSEKQPLFEIPCTNVSQC-VANKNEAILEFHQNENIPV----SLMEMRLYMPVDPEM 170
Query: 62 FVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQ 121
++ + F+ +++ A + A E+ + I TPRGRY ++++ + + L G+
Sbjct: 171 ---EDETDKVEEFKKAVLAYAGLEAETEQPITLLTDILCTTPRGRYDIKVYPTSIALHGK 227
Query: 122 ANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELL 181
D+KI S+ RLFL+P + H + V++L+PPIR+GQT Y ++V +F + + E+
Sbjct: 228 TYDYKIPVKSINRLFLVPHKDGRHVYFVLSLNPPIRQGQTRYSYLVFEFVKEDDQEMEIT 287
Query: 182 MSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAE 241
+++E L KY + L+ G ++E + + + + K+T PG+F A++ + K
Sbjct: 288 LTDE-LEEKYGNNLKRDLDGPLYENVSILFKVVCNLKVTVPGRFIGNSGTPAIQCNHKQN 346
Query: 242 DGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRN 301
G+LYP+EK F F+ KP I EEI F R A G+ FD + LK +F
Sbjct: 347 PGLLYPMEKGFLFIHKPVMYIRFEEISSCHFARSDA-GTVTRTFDFEVDLKNGSSLMFNT 405
Query: 302 IQRNEYHNLFDFISGKGLKIMNLG--DMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGD 359
+++ E LFD+++ K +KI N D K D + D+ DP+ + E G
Sbjct: 406 MEKEENAKLFDYLNKKDIKIRNSTRIDNKKND------VDSSDEEHDPYKATVTAEGRGK 459
Query: 360 ESDEE----------DSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKK-ES 408
++ ++ D D K D S ++ SG E D +SG E++ ES+ E
Sbjct: 460 DNSDDDESTDEDYDLDKDLKKQKVDRDS-SEGSGSEPDDEYDSGSEEDASGTGESEPDEE 518
Query: 409 SSVKASTSKKKSRDGDEDGKKK--------KQKKKKDPNAPKRAMSGFIFFSQMERENIK 460
+S +K++ E K K K+KK KDP PKRA + + + Q R + K
Sbjct: 519 NSGNKKKKSEKTKKSREPMKPKLGKNGKEKKEKKVKDPLEPKRATTAYFLWFQANRLSFK 578
Query: 461 KSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
+ +A DV + G +WK+M ++++ +E KA DK RY+ E+ YK
Sbjct: 579 EDGDTVA--DVAKKGGAKWKEMGSDDKKEWEEKAAKDKARYEAEMKEYK 625
>gi|403412142|emb|CCL98842.1| predicted protein [Fibroporia radiculosa]
Length = 623
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 152/418 (36%), Positives = 227/418 (54%), Gaps = 43/418 (10%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHV---DDTTGANEKDSLMEISFHIPNS 58
L F+V K AFE+ L S + + G+ +V LEF + N D ++EI F++P +
Sbjct: 118 LAFLVSNKTAFELPLDHASNSNIAGRTEVSLEFVTPSGNKKAARNAPDEMVEIRFYVPGT 177
Query: 59 NTQFVG----------DENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYS 108
T+ G +E AQ F D + A++G + +++FE + +LTPRGRY
Sbjct: 178 ATRDRGSDAGSQKSDDEEEISAAQAFHDIVKEKAEIGQVAGDVILSFEEVLVLTPRGRYD 237
Query: 109 VELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVL 168
V++ FLRL+G+ D+KI Y S+ RLFLLPK +Q H +++L PIR+GQT Y ++V+
Sbjct: 238 VDMFPEFLRLRGKTYDYKILYGSISRLFLLPKDDQ-HVLFILSLSTPIRQGQTRYQYLVM 296
Query: 169 QFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSA 228
QF + + +EL MSEE + KY ++L+ +Y+ EV + + R LSG KI G F+S
Sbjct: 297 QFNREEEITAELNMSEEEI-AKY-ERLKKNYEDPTFEVVSGVFRALSGKKIIGAGSFQS- 353
Query: 229 QDGY-AVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAA--GGSNMHYF 285
DG+ +K++LKA G L+ LEK FF+ K PTLI +I V F R A G + F
Sbjct: 354 HDGHPGIKANLKAVQGDLFLLEKYIFFVSKQPTLIELSDIHQVVFSRLGAGLGATAARTF 413
Query: 286 DLLIRLKTEQEHLFRNIQRNEYHNLFDFI---SGKGLKIMNLGDMKTTDGVAAVLQEDDD 342
DL I K+ E+ F ++ + E+ ++ K M G++ +L DD+
Sbjct: 414 DLKIVTKSGPEYTFTSVNKEEHEGTETYLKEKKVKVKNEMMEGEL--------ILAADDE 465
Query: 343 D----AVDPHLERI-KNEAGG-DESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGG 394
D +V E + K GG D+ EED DF A + D GSPT DSD+S+ GG
Sbjct: 466 DEEMQSVASSGEEVPKPRLGGEDDDSEEDEDFQASESDEGSPT------DSDSSDEGG 517
>gi|322787094|gb|EFZ13315.1| hypothetical protein SINV_04520 [Solenopsis invicta]
Length = 383
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 120/297 (40%), Positives = 171/297 (57%), Gaps = 13/297 (4%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F VG AFE+ L DVSQ GKN+V LEFH +D + SLME+ FHIP S+T
Sbjct: 100 VLSFDVGHHTAFEIPLYDVSQCN-TGKNEVTLEFHQND----DAPVSLMEMRFHIPVSDT 154
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
GD++ + F ++M A V + +A+ F I LTPRGRY +++ +F +L G
Sbjct: 155 ---GDQD--SVEAFHQQVMDKASVISVSGDAIAIFREIHCLTPRGRYDIKIFQTFFQLHG 209
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI S+V+RLFLLP + F VV+LDPPI++GQT Y ++VL F + EL
Sbjct: 210 KTFDYKIPMSTVLRLFLLPHKDNRQMFFVVSLDPPIKQGQTRYHYLVLLFNQEEETSIEL 269
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
+E+ L KY+DKL G +EV +++ + K+T PG F +++ S KA
Sbjct: 270 PFTEKELKEKYEDKLSKEISGPTYEVLGKVMKVIINRKLTGPGHFTGHTGTHSIGCSFKA 329
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEH 297
G LYPLE+ F ++ KPP I EEI V F R GG + FD I+L + E+
Sbjct: 330 AAGYLYPLERGFIYVHKPPIHIRFEEIASVNFAR---GGGSTRSFDFEIKLTSGVEY 383
>gi|358058034|dbj|GAA96279.1| hypothetical protein E5Q_02945 [Mixia osmundae IAM 14324]
Length = 596
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 140/450 (31%), Positives = 225/450 (50%), Gaps = 77/450 (17%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFH-------------VDDTTGANEK--- 45
L F+V K AF V L+ VS + +Q KN+V LEF +DD A+++
Sbjct: 122 LAFIVAGKPAFAVPLSTVSNSSVQ-KNEVTLEFSRTLEDEDDPNKVKMDDPKEASKEAKR 180
Query: 46 ------DSLMEISFHIPNSNTQFVGD----------EN--------------------HP 69
D ++E+ +IP S EN
Sbjct: 181 RRRALPDEMVEMRLYIPGSAKSAARKAKKDKQAETGENGAEEEEEEEDEEEDEDLEDELA 240
Query: 70 PAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQY 129
AQ F D I AD+G + ++TF I TPRG++ ++L+ SFLRL+G+ D+K+ Y
Sbjct: 241 AAQAFHDLIKDKADIGQVVGDGLLTFPEILCTTPRGKFDIDLYGSFLRLRGKTYDYKLPY 300
Query: 130 SSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNT 189
S+ R+FLLP+ ++ H +V+ +DPP+R+GQT YP+++ QF D + +E+ +S+E L
Sbjct: 301 ESIARIFLLPRPDEIHVQLVINVDPPLRQGQTRYPYLIFQFSRDEEMMAEIKLSDEEL-A 359
Query: 190 KYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLE 249
Y KL+ SY+ +EV + I+ GL+ K+ +PG F+S + VK ++KA++G +Y LE
Sbjct: 360 AYNGKLQKSYEAPAYEVVSNIIHGLANKKVIRPGGFQSHEGHNGVKCNVKADEGYIYFLE 419
Query: 250 KSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHN 309
+S F+ K P + + + V FER + FDL + + +H+F ++ + E
Sbjct: 420 RSMLFVSKKPIFMPYADTSLVRFERVGGAMLSSRTFDLRVATRGGPDHVFSSVSKEELQV 479
Query: 310 LFDFISGKGLKIMNLGDMKTTDGVAAVLQE-----------DDDDAVDPHLERIKNEAGG 358
+ + KG+++ N +T+ VAA+L E +D D V K AG
Sbjct: 480 IDSHLKDKGVRVKNEIAEETSATVAAMLSEDDDDDDDMIASEDGDGV-------KRAAGS 532
Query: 359 DESDEEDSDFVADKDDGGSPTDDSGEEDSD 388
+S+ ED DF A GS +DD E+ D
Sbjct: 533 GDSESEDEDFQA-----GSNSDDDLPEEYD 557
>gi|58270624|ref|XP_572468.1| chromatin binding protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134118116|ref|XP_772439.1| hypothetical protein CNBL3050 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338819209|sp|P0CR75.1|POB3_CRYNB RecName: Full=FACT complex subunit POB3; AltName: Full=Facilitates
chromatin transcription complex subunit POB3
gi|338819210|sp|P0CR74.1|POB3_CRYNJ RecName: Full=FACT complex subunit POB3; AltName: Full=Facilitates
chromatin transcription complex subunit POB3
gi|50255052|gb|EAL17792.1| hypothetical protein CNBL3050 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228726|gb|AAW45161.1| chromatin binding protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 588
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 125/383 (32%), Positives = 207/383 (54%), Gaps = 26/383 (6%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVD-----DTTGANEK--DSLMEISFH 54
L F V K AF+V L+ V+ + + GK +V LEF+ D N++ D ++E+ F+
Sbjct: 120 LVFQVQGKTAFDVPLSQVANSNIAGKYEVALEFNPPSNYKFDPKDLNKRPPDEMVEMRFY 179
Query: 55 IPNSNTQFVGDENHP---------------PAQVFRDKIMSMADVGAGGEEAVVTFEGIA 99
IP + + G + A F I AD+GA +++V FE
Sbjct: 180 IPGKSMKKAGSDAGSGGEETELDEEGNEVSAADAFHSLIKEKADIGAVVGDSIVVFEDCL 239
Query: 100 ILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKG 159
ILTPRGR+S+E++ +RL G++ D ++ ++S+ R+FLLPK + H +V+ LDPPIR+G
Sbjct: 240 ILTPRGRFSIEVYADSIRLVGKSTDHRVPFTSIHRIFLLPKLDDLHVQLVLGLDPPIRQG 299
Query: 160 QTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKI 219
T YP +V Q+ D VV +EL +++E L +Y D LE +Y+ +V + +L+ L+G K+
Sbjct: 300 ATRYPFLVAQWPKDEVVNAELNLTDEEL-AQYPD-LEKTYEATTFQVVSRVLKALTGKKV 357
Query: 220 TKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGG 279
T PG R+AQ +++++KA G LY LEK F+ K P LI + D + F R G
Sbjct: 358 TPPGSLRNAQGLNGIRANVKAVQGELYFLEKGLIFISKQPILIDFSKTDSISFSRVGGGV 417
Query: 280 SNMHYFDLLIRLKT-EQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQ 338
++ FD+ + KT +H+F I + E + F+ K +++ N + D +
Sbjct: 418 ASARTFDMRVVSKTGGADHVFSAINKQEVGPISSFLQSKNIRLKNEMEEAIVD-IDEPFS 476
Query: 339 EDDDDAVDPHLERIKNEAGGDES 361
+DD++ P + ++A D+S
Sbjct: 477 DDDEEMESPSEDERPSKAKNDKS 499
>gi|405124330|gb|AFR99092.1| chromatin binding protein [Cryptococcus neoformans var. grubii H99]
Length = 588
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 126/381 (33%), Positives = 206/381 (54%), Gaps = 30/381 (7%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVD-----DTTGANEK--DSLMEISFH 54
L F V K AF+V L+ V+ + + GK +V LEF+ D N++ D ++E+ F+
Sbjct: 120 LVFQVQGKTAFDVPLSQVANSNIAGKYEVALEFNPPSNYKFDPKDLNKRPPDEMVEMRFY 179
Query: 55 IPNSNTQFVGDENHP---------------PAQVFRDKIMSMADVGAGGEEAVVTFEGIA 99
IP +T+ G + A F I AD+GA +++V FE
Sbjct: 180 IPGKSTKKAGSDAGSGGEETELDEEGNEVSAADAFHSLIKEKADIGAVVGDSIVVFEDCL 239
Query: 100 ILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKG 159
ILTPRGR+S+E++ +RL G++ D ++ ++S+ R+FLLPK + H +V+ LDPPIR+G
Sbjct: 240 ILTPRGRFSIEVYADSIRLVGKSTDHRVPFTSIHRIFLLPKLDDLHVQLVLGLDPPIRQG 299
Query: 160 QTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKI 219
T YP +V Q+ D VV +EL +++E L +Y D LE +Y+ +V + +L+ L+G K+
Sbjct: 300 ATRYPFLVAQWPKDEVVNAELNLTDEEL-AQYPD-LEKTYEATTFQVVSRVLKALTGKKV 357
Query: 220 TKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGG 279
T PG R+AQ +++++KA G LY LEK F+ K P LI + D + F R G
Sbjct: 358 TPPGSLRNAQGLNGIRANVKAVQGELYFLEKGLIFISKQPILIDFSKTDSISFSRVGGGV 417
Query: 280 SNMHYFDLLIRLKTE-QEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQ 338
++ FD+ + KT +H+F I + E + F+ K +++ N + D +
Sbjct: 418 ASARTFDMRVVSKTGGADHVFSAINKQEVGPISSFLQSKNIRLKNEMEEAIVD-IDEPFS 476
Query: 339 EDDDD----AVDPHLERIKNE 355
+DD++ + D R KN+
Sbjct: 477 DDDEEMESASEDERPSRAKND 497
>gi|392566242|gb|EIW59418.1| SSrecog-domain-containing protein [Trametes versicolor FP-101664
SS1]
Length = 644
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 149/423 (35%), Positives = 235/423 (55%), Gaps = 37/423 (8%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEK-DSLMEISFHIPNSNT 60
L F+V + AFE+ L +V+ + + G+ +V LEF + D ++EI F++P T
Sbjct: 116 LAFLVSNRTAFELPLPNVANSNIAGRTEVSLEFATQSKKPSRSAPDEMVEIRFYVPG--T 173
Query: 61 QFVGD----------------ENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPR 104
Q G E AQ F D + A++G + +++F+ + +LTPR
Sbjct: 174 QVKGQRGSDAGSQKSDVEEDGEEISAAQAFHDMVKEKAELGQVAGDIILSFDEVNVLTPR 233
Query: 105 GRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYP 164
GRY V+++ FLRL+G+ D+KI Y S+ +LFLLPK +Q H ++ L PIR+GQT Y
Sbjct: 234 GRYDVDMYPEFLRLRGRTYDYKIMYGSISKLFLLPKDDQ-HVLFILGLSVPIRQGQTRYQ 292
Query: 165 HIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGK 224
++V+QF + + +EL MSEE + +Y +KL+ +Y+ EV + + R LS KI G
Sbjct: 293 YLVMQFNREEEITAELNMSEEEI-AQY-EKLKKNYEDPTFEVVSGVFRALSKKKIIGAGN 350
Query: 225 FRSAQDGY-AVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAA--GGSN 281
F+S +DG+ +VK++LKA G L+ LEK FF+ K PTLI +I V F R A G +
Sbjct: 351 FQS-RDGHPSVKANLKAVQGDLFMLEKYIFFVSKQPTLIELSDIHLVVFSRLGAGLGATA 409
Query: 282 MHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDD 341
FD+ I K E+ F ++ + EY ++ ++ K +K N +M + V A+ +DD
Sbjct: 410 ARTFDVKIVTKRGPEYTFTSLNKEEYDHVNAYLQDKKVKTKN--EMMEGELVMAI--DDD 465
Query: 342 DD---AVDPHLERI-KNEAGG-DESDEEDSDFVADKDDGGSPTDDSGEEDS--DASESGG 394
DD +V E + K GG D+ EED DF A D GSP++ +E+ AS++ G
Sbjct: 466 DDEMQSVASSGEEVPKPRLGGDDDDSEEDDDFQASDSDSGSPSESDSDEEGGRTASDASG 525
Query: 395 EKE 397
+++
Sbjct: 526 DRD 528
>gi|393212314|gb|EJC97814.1| SSrecog-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 604
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 118/335 (35%), Positives = 184/335 (54%), Gaps = 17/335 (5%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDD---TTGANEKDSLMEISFHIPNS 58
L F+V K AFE+ L V+ + + G+ +V LEF + GA D L+EI F++P +
Sbjct: 116 LAFLVSNKTAFELPLQKVANSNIAGRTEVSLEFATSAGRPSRGAG--DELVEIRFYVPGT 173
Query: 59 NTQFVGDE----------NHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYS 108
+ +G + AQ F D + A++G +V FE + +LTPRGRY
Sbjct: 174 QIKDIGSDAGEEQVEDEEETSAAQAFHDAVKEKAELGEVTGNVIVNFEEVLVLTPRGRYD 233
Query: 109 VELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVL 168
V++ FLRL+G+ D+KI Y + +LFLLPK +Q H +++L PIR+GQT Y +V+
Sbjct: 234 VDMFPEFLRLRGKTYDYKINYDGISKLFLLPKDDQ-HVLFILSLVNPIRQGQTRYHFLVM 292
Query: 169 QFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSA 228
QF+ + +++EL + E + KY +KL+ Y+ EV ++I R LS KI G F S
Sbjct: 293 QFDREEEIRAELNIEEFVELAKY-EKLQKHYEASSFEVISSIFRALSKNKIIGSGSFSSR 351
Query: 229 QDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLL 288
+K++LKA G L+ LEK FF+ K P LI +I V F R + FDL+
Sbjct: 352 TGHPGIKANLKAVQGDLFILEKYLFFVAKAPLLIELSDIHQVNFSRVGGPMATSRTFDLV 411
Query: 289 IRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMN 323
+ K+ EH F ++ + E+ + ++ GK L++ N
Sbjct: 412 VVTKSGPEHTFSSLNKEEHEGIEGYLKGKKLRVKN 446
>gi|388855328|emb|CCF50992.1| probable POB3-protein that binds to DNA polymerase I [Ustilago
hordei]
Length = 557
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 112/343 (32%), Positives = 190/343 (55%), Gaps = 23/343 (6%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEF----------HVDDTTGANEKDSLMEI 51
+ F+V K AFE+ L+ ++ + + K +V +EF + ++G N+ D L+E+
Sbjct: 129 VQFLVRDKLAFELPLSHLANSNI-AKTEVSMEFLNPEQQQPGANATKSSG-NKGDQLVEM 186
Query: 52 SFHIPNSNTQ-----------FVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAI 100
++P + + A+ F + + S AD+G +++V F+ + +
Sbjct: 187 RLYLPGQAAKEDGSDAASAADGDDNNQETAAEAFHEALKSKADIGQVAGDSIVVFKEVLV 246
Query: 101 LTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQ 160
LTPRGRY +++ +F+RL+G+ D+KI YSS+ +LFLLPKS++ H +V+ LDP IR+GQ
Sbjct: 247 LTPRGRYDIDVFNTFIRLRGKTYDYKILYSSMNKLFLLPKSDEIHVMLVIGLDPSIRQGQ 306
Query: 161 TLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKIT 220
T YP++VLQF + + +EL + E+ + KY KL+ Y+ + T I + LSG K+
Sbjct: 307 TRYPYLVLQFPREEEMDAELNLDEQTIQDKYDGKLKKRYEEPTFRIVTNIFKVLSGQKVA 366
Query: 221 KPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGS 280
P F S+ ++K +LKA DG LYPLEKS ++ K P + + EI R +
Sbjct: 367 TPTDFESSSGQTSIKCNLKAADGNLYPLEKSLLWVSKQPVYVPYSEIHQAILSRVGGAVA 426
Query: 281 NMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMN 323
+ FDL + K +H F++I R E L +++ + ++I N
Sbjct: 427 SSKTFDLRVATKGGTDHTFQSISREELDRLKAWLAERKVRIKN 469
>gi|17553930|ref|NP_498633.1| Protein HMG-4 [Caenorhabditis elegans]
gi|1174454|sp|P41848.1|SSP1A_CAEEL RecName: Full=FACT complex subunit SSRP1-A; AltName:
Full=Facilitates chromatin transcription complex subunit
ssrp1-A; AltName: Full=HMG box-containing protein 4;
AltName: Full=Structure-specific recognition protein 1-A
gi|351061300|emb|CCD69078.1| Protein HMG-4 [Caenorhabditis elegans]
Length = 697
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 157/531 (29%), Positives = 257/531 (48%), Gaps = 53/531 (9%)
Query: 4 FMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFV 63
F K FE+ +VS + KN+ +LEFH +D + K LME+ FH+P
Sbjct: 120 FSWEDKPIFEIPCTNVSNV-IANKNEAVLEFHQND----DSKVQLMEMRFHMP---IDLE 171
Query: 64 GDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 123
+E+ + F+ +++ A + A E+ + I TPRGRY ++++ + + L G+
Sbjct: 172 NEEDADKVEEFKKAVLAYAGLEAETEQPICLLTDILCTTPRGRYDIKVYPTSIALHGKTY 231
Query: 124 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMS 183
D+KI S+ RLFL+P + H + V++L+PPIR+GQT Y +++ +F D EL ++
Sbjct: 232 DYKIPIKSINRLFLVPHKDGRHVYFVLSLNPPIRQGQTRYSYLIFEFGKDEEQDLELALT 291
Query: 184 EELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDG 243
+E L + L G I+E + + + + KIT PG+F + A++ + + G
Sbjct: 292 DEQLESS-NGNLRRDMTGPIYETISILFKSICNLKITVPGRFLGSSGTPAIQCTHRQNPG 350
Query: 244 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ 303
+LYP+EK F F+ KP I EEI F R + G+ FD I LK F ++
Sbjct: 351 LLYPMEKGFLFIHKPAMYIRFEEISSCHFAR-SDSGTVTRTFDFEIDLKYGGPLTFNAME 409
Query: 304 RNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEA------- 356
+ E + LFD+++ K +KI N + V + + DD +DP+ + E
Sbjct: 410 KEENNKLFDYLNKKNIKIRN------SQRVENTVADSSDDEIDPYKAAVTAEGRQRDDSD 463
Query: 357 ------------------GGDESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEK 398
ES E D+ D GS D SG + SE E++
Sbjct: 464 DDSTDEDYDLDKDIKKKKEDKESSEGTGSEPDDEYDSGSEQDSSG---TGESEPDSEQDV 520
Query: 399 PAKKESKKESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMEREN 458
P+K+ + + ++K + KK KK KDPNAPKRA S ++ + R
Sbjct: 521 PSKRRKGEPKEKREKKEKREKK-------EGKKGKKDKDPNAPKRATSAYMQWFLASRNE 573
Query: 459 IKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
+K+ +A DV + G +WK MS ++++ +E KA DK RY+ E+ Y+
Sbjct: 574 LKEDGDSVA--DVAKKGGAKWKTMSSDDKKKWEEKAEEDKSRYEKEMKEYR 622
>gi|406697061|gb|EKD00330.1| subunit of the heterodimeric FACT complex, Pob3p [Trichosporon
asahii var. asahii CBS 8904]
Length = 550
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 121/352 (34%), Positives = 194/352 (55%), Gaps = 22/352 (6%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTG--ANEKDSLMEISFHIPNSN 59
L F V K AFE+ L+ V+ + + GKN+V +EF G A + D L+EI F++P +
Sbjct: 88 LAFEVQHKTAFELPLSQVANSNIAGKNEVSIEFMPKTFEGNSARDPDELVEIRFYVPGKS 147
Query: 60 TQF----VGDENHP------------PAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTP 103
+ G + P A+ + I AD+GA +++V FE + +LTP
Sbjct: 148 KKPKGSDAGSDEEPETDVDEEGNEISAAEAMHNMIKDKADIGAAVGDSIVVFEEVLVLTP 207
Query: 104 RGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLY 163
RGR+S+E LRL G++ D+++ +SS+ R+FLLPK + H +V+ LDPPIR+G T Y
Sbjct: 208 RGRFSLEFFHESLRLLGKSTDYRVPFSSINRIFLLPKLDDLHIQLVLGLDPPIRQGATRY 267
Query: 164 PHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPG 223
P +V Q+ D V +EL + +E + KY D L+ Y+ +V + +L+ L+G K+T PG
Sbjct: 268 PFLVAQWPKDEEVDAELNLDDEEI-AKYPD-LQKKYEAPTFQVISRVLKSLTGKKVTPPG 325
Query: 224 KFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMH 283
FR+AQ +K+++KA G LY LEK F+ K P LI + + + F R G ++
Sbjct: 326 NFRNAQGVNGIKANVKAVQGELYFLEKGLIFIAKQPILIDFSKTESISFSRVGGGVASAR 385
Query: 284 YFDLLIRLKT-EQEHLFRNIQRNEYHNLFDFISGKGLKIMN-LGDMKTTDGV 333
FD+ + KT +F I + E + F++ K +++ N + D+ D V
Sbjct: 386 TFDMRVTSKTGTVPTVFSAISKEEAGPISQFLASKNVRLKNEIDDVMDVDAV 437
>gi|254565083|ref|XP_002489652.1| Subunit of the heterodimeric FACT complex (Spt16p-Pob3p)
[Komagataella pastoris GS115]
gi|238029448|emb|CAY67371.1| Subunit of the heterodimeric FACT complex (Spt16p-Pob3p)
[Komagataella pastoris GS115]
Length = 528
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 133/423 (31%), Positives = 226/423 (53%), Gaps = 43/423 (10%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFH---VDDTTGANEKDSLMEISFHIP-- 56
L F V + A+E+ +++S + L G++++ +E + VD+ D L+E+ ++P
Sbjct: 122 LVFNVNNRPAWEIPYSEISNSNLTGRHEISMELNPKTVDENHYETLGDELVEVRLYVPGQ 181
Query: 57 ------NSNTQFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVE 110
++ Q +E +Q+F +++ AD E A+V+FE I LTPRGR+ +
Sbjct: 182 IDKDEDSTEGQDTTEEAKSKSQLFYEQLKDKADFDTTSE-AIVSFEDILFLTPRGRFEIS 240
Query: 111 LHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQF 170
++ + LRL+GQ+ D+KIQ +V+R+F LP+ + H V++ +DPP+R+GQT YP +V+QF
Sbjct: 241 MYANNLRLRGQSYDYKIQNKNVLRIFSLPRLDDRHHLVILQVDPPLRQGQTRYPFLVMQF 300
Query: 171 ETDYVVQSELLMSEELLNTKYKDKLEPSY-KGLIHEVFTTILRGLSGAKITKPGKFRSAQ 229
+ + ++ EL +S+E +KY+ KL SY +++ + LRGL+ ++ PG F+S
Sbjct: 301 DRNEELEVELNLSDEEYKSKYEGKLNRSYGTDSTYKILSHCLRGLTERRVITPGSFQSQH 360
Query: 230 DGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLI 289
V SLKA +G +Y L+K FF KP + + I V R G S FD+ +
Sbjct: 361 MQPGVNCSLKASEGQIYLLDKCLFFATKPCVYLPYSGIISVVTSR-GTGQSTSRTFDIEV 419
Query: 290 RLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMN------LGDM-------KTTDGVAAV 336
+ + H F NI ++E + DF+ G+G+++ N LG+ +A
Sbjct: 420 QF-SGGSHTFANINKDEQKPIEDFLKGQGVRVKNEKPAEFLGNALVDDDDDSDDGDIAMG 478
Query: 337 LQEDDDDAVDPHLERIKNEAGGDESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEK 396
+DD++VD G +SD VA++ D + ++D EDSDAS EK
Sbjct: 479 SAGEDDESVDEDFN------AGSDSD------VAEEYDSNAGSED---EDSDASSGEPEK 523
Query: 397 EKP 399
+KP
Sbjct: 524 KKP 526
>gi|409078873|gb|EKM79235.1| hypothetical protein AGABI1DRAFT_58681 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 684
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 125/335 (37%), Positives = 194/335 (57%), Gaps = 19/335 (5%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIP----- 56
L FMV K AFE+ L V+ + + G+ +V LEF D +MEI FH+P
Sbjct: 116 LAFMVQDKVAFELPLRHVANSNIAGRTEVSLEFTPLGKGSKALGDEMMEIRFHVPGTQKS 175
Query: 57 -----NSNTQFVGDE--NHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSV 109
++ +Q DE + AQVF D I A++G + +++FE I +LTPRGRY +
Sbjct: 176 KATGSDAGSQKSDDEEDDISAAQVFHDTIKEKAELGQVSGDLILSFEEILVLTPRGRYDM 235
Query: 110 ELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQ 169
++ +LRL+G+ D+KI Y+S+ +LFLLPK +Q F ++ L PIR+GQT Y ++V+Q
Sbjct: 236 DMSHEYLRLRGKTYDYKIMYNSISKLFLLPKDDQRVLF-ILGLSIPIRQGQTRYQYLVMQ 294
Query: 170 FETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQ 229
F + + +EL M+EE + KY D+L+ +Y+ EV +++ R L+ KI G F+S +
Sbjct: 295 FSREEEITAELNMTEEEV-AKY-DRLKKNYEDPTFEVVSSVFRALAKKKIVGAGSFQS-R 351
Query: 230 DGY-AVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAA--GGSNMHYFD 286
DG+ +K++LKA G L+ LEK FF+ K P L+ +I V F R A G + FD
Sbjct: 352 DGHPGIKANLKAIQGDLFLLEKYIFFVSKSPLLVEIADIHQVVFSRVGASMGAAAARTFD 411
Query: 287 LLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKI 321
L I K+ EH F +I + E+ ++ ++ K +KI
Sbjct: 412 LKIVTKSGAEHTFTSINKEEHESVDAYLKDKKIKI 446
>gi|426195782|gb|EKV45711.1| hypothetical protein AGABI2DRAFT_193658 [Agaricus bisporus var.
bisporus H97]
Length = 686
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 125/335 (37%), Positives = 194/335 (57%), Gaps = 19/335 (5%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIP----- 56
L FMV K AFE+ L V+ + + G+ +V LEF D +MEI FH+P
Sbjct: 116 LAFMVQDKVAFELPLRHVANSNIAGRTEVSLEFTPLGKGSKALGDEMMEIRFHVPGTQKS 175
Query: 57 -----NSNTQFVGDE--NHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSV 109
++ +Q DE + AQVF D I A++G + +++FE I +LTPRGRY +
Sbjct: 176 KATGSDAGSQKSDDEEDDISAAQVFHDTIKEKAELGQVSGDLILSFEEILVLTPRGRYDM 235
Query: 110 ELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQ 169
++ +LRL+G+ D+KI Y+S+ +LFLLPK +Q F ++ L PIR+GQT Y ++V+Q
Sbjct: 236 DMSHEYLRLRGKTYDYKIMYNSISKLFLLPKDDQRVLF-ILGLSIPIRQGQTRYQYLVMQ 294
Query: 170 FETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQ 229
F + + +EL M+EE + KY D+L+ +Y+ EV +++ R L+ KI G F+S +
Sbjct: 295 FSREEEITAELNMTEEEV-AKY-DRLKKNYEDPTFEVVSSVFRALAKKKIVGAGSFQS-R 351
Query: 230 DGY-AVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAA--GGSNMHYFD 286
DG+ +K++LKA G L+ LEK FF+ K P L+ +I V F R A G + FD
Sbjct: 352 DGHPGIKANLKAIQGDLFLLEKYIFFVSKSPLLVEIADIHQVVFSRVGASMGAAAARTFD 411
Query: 287 LLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKI 321
L I K+ EH F +I + E+ ++ ++ K +KI
Sbjct: 412 LKIVTKSGAEHTFTSINKEEHESVDAYLKDKKIKI 446
>gi|328350071|emb|CCA36471.1| FACT complex subunit POB3 [Komagataella pastoris CBS 7435]
Length = 559
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 133/423 (31%), Positives = 226/423 (53%), Gaps = 43/423 (10%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFH---VDDTTGANEKDSLMEISFHIP-- 56
L F V + A+E+ +++S + L G++++ +E + VD+ D L+E+ ++P
Sbjct: 153 LVFNVNNRPAWEIPYSEISNSNLTGRHEISMELNPKTVDENHYETLGDELVEVRLYVPGQ 212
Query: 57 ------NSNTQFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVE 110
++ Q +E +Q+F +++ AD E A+V+FE I LTPRGR+ +
Sbjct: 213 IDKDEDSTEGQDTTEEAKSKSQLFYEQLKDKADFDTTSE-AIVSFEDILFLTPRGRFEIS 271
Query: 111 LHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQF 170
++ + LRL+GQ+ D+KIQ +V+R+F LP+ + H V++ +DPP+R+GQT YP +V+QF
Sbjct: 272 MYANNLRLRGQSYDYKIQNKNVLRIFSLPRLDDRHHLVILQVDPPLRQGQTRYPFLVMQF 331
Query: 171 ETDYVVQSELLMSEELLNTKYKDKLEPSY-KGLIHEVFTTILRGLSGAKITKPGKFRSAQ 229
+ + ++ EL +S+E +KY+ KL SY +++ + LRGL+ ++ PG F+S
Sbjct: 332 DRNEELEVELNLSDEEYKSKYEGKLNRSYGTDSTYKILSHCLRGLTERRVITPGSFQSQH 391
Query: 230 DGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLI 289
V SLKA +G +Y L+K FF KP + + I V R G S FD+ +
Sbjct: 392 MQPGVNCSLKASEGQIYLLDKCLFFATKPCVYLPYSGIISVVTSR-GTGQSTSRTFDIEV 450
Query: 290 RLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMN------LGDM-------KTTDGVAAV 336
+ + H F NI ++E + DF+ G+G+++ N LG+ +A
Sbjct: 451 QF-SGGSHTFANINKDEQKPIEDFLKGQGVRVKNEKPAEFLGNALVDDDDDSDDGDIAMG 509
Query: 337 LQEDDDDAVDPHLERIKNEAGGDESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEK 396
+DD++VD G +SD VA++ D + ++D EDSDAS EK
Sbjct: 510 SAGEDDESVDEDFN------AGSDSD------VAEEYDSNAGSED---EDSDASSGEPEK 554
Query: 397 EKP 399
+KP
Sbjct: 555 KKP 557
>gi|159462694|ref|XP_001689577.1| high mobility group protein [Chlamydomonas reinhardtii]
gi|158283565|gb|EDP09315.1| high mobility group protein [Chlamydomonas reinhardtii]
Length = 552
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 103/218 (47%), Positives = 142/218 (65%), Gaps = 6/218 (2%)
Query: 26 GKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFVGD-ENHPPAQVFRDKIMS-MAD 83
GK+DV+LE HVDDT G +D L E++F++P N F E PPA+V D ++
Sbjct: 141 GKDDVMLELHVDDTGGEVAEDMLTELAFYVPPGNEDFPAQGEEVPPAKVMLDALLPHADT 200
Query: 84 VGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQ 143
A +E V F + I+ PRGR+ VE+HL +L+L GQ+ DFK++Y+S+ R+F+LPK N
Sbjct: 201 EAAAADEPVCVFSEVGIVAPRGRFEVEMHLGYLQLGGQSQDFKVRYASIQRIFILPKHNT 260
Query: 144 PHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELL---NTKYKDKLEPSYK 200
PHT VV++LDPPIRKGQT Y H++ QF TD + EL ++EE L N K KL
Sbjct: 261 PHTLVVISLDPPIRKGQTYYAHLLCQFPTDDDISVELDITEEALAAKNEKNGGKLSADMT 320
Query: 201 GLIHEVFTTILRGLSGAKITKPGKFR-SAQDGYAVKSS 237
G + EVF +LRGLSGA+IT+PG F+ +A DG ++ S
Sbjct: 321 GPVWEVFAKLLRGLSGARITRPGHFKNAAGDGVNIQRS 358
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 99/202 (49%), Gaps = 18/202 (8%)
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDD----DAVDPHLERIKNEA 356
NIQR+E+ NLF+FI K + I N G + G A EDDD AVD ++ K
Sbjct: 354 NIQRSEWGNLFEFIRAKKIPIENFGSAQHGPGGAKPGMEDDDMDPGVAVDAIKKKRKKGD 413
Query: 357 GGDESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSSVKASTS 416
+ E + K + +DA+ K
Sbjct: 414 ADGGEEGEAAAAPPPKKKPAKEKPATSPSGADAAPG--------------SGGKGKKGKK 459
Query: 417 KKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLG 476
+ +G+ K KK++KKKDPNAPK+ +S F++FS R+ +K NPGIAF +VG++LG
Sbjct: 460 AAATEEGEGGAKPKKERKKKDPNAPKKNLSAFMYFSNSNRDKVKAENPGIAFGEVGKLLG 519
Query: 477 ERWKKMSVEEREPYESKARADK 498
ERWK MS EE+ PY+ A DK
Sbjct: 520 ERWKAMSAEEKAPYDEMAAKDK 541
>gi|363748000|ref|XP_003644218.1| hypothetical protein Ecym_1149 [Eremothecium cymbalariae
DBVPG#7215]
gi|356887850|gb|AET37401.1| hypothetical protein Ecym_1149 [Eremothecium cymbalariae
DBVPG#7215]
Length = 538
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 125/427 (29%), Positives = 219/427 (51%), Gaps = 38/427 (8%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQ 61
L + K FE+ + +S T L KN+V +EF + + D L+E+ F++P
Sbjct: 123 LILSLNGKPTFEIPYSHISNTNLTSKNEVAVEFDLQTDSYNPAGDELVEMRFYLPG---- 178
Query: 62 FVGDEN-HPP-------------------AQVFRDKIMSMADVGAGGEEAVVTFEGIAIL 101
FV E+ H P A+ F +++ + AD+G +A+++F +
Sbjct: 179 FVSQEDRHTPGATDDDIEGDKESKAEKSIAEAFYEELKAKADIGEVSGDAIISFHDVFFT 238
Query: 102 TPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQT 161
TPRGRY ++++ + +RL+G+ ++K+Q + R+F LPK++ H +V++++PP+R+GQT
Sbjct: 239 TPRGRYDIDIYKNSIRLRGKTYEYKLQQRQIQRIFSLPKADDIHHLMVLSIEPPLRQGQT 298
Query: 162 LYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITK 221
YP++VLQF+ D + +L + ++ YKD L+ Y H V + +L+GL+ ++
Sbjct: 299 SYPYLVLQFQKDEETEVQLNVEDDEFEKLYKDNLKKQYDAKTHIVLSHVLKGLTDRRVVV 358
Query: 222 PGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSN 281
PG+++S + AV S KA +G LYPL+ +F FL KP I +++ V R ++
Sbjct: 359 PGEYKSKYEQCAVSCSFKANEGHLYPLDNAFMFLTKPTLYIPFQDVSSVNISRAGQTTAS 418
Query: 282 MHYFDLLIRLKTEQ-EHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQED 340
FDL + L++ + F NI + E L F+ K +++ N + +T + L D
Sbjct: 419 SRTFDLEVILRSNRGATTFANISKEEQQLLESFLKSKNVRVKN-EEKETQHRLQTALGSD 477
Query: 341 DDDAVDPHLERIKNEAGGDESDEEDSDFVADKDDGGSPTDDSGEE-DSDASESGGEKEKP 399
+D E + + ++ + D DF A+ +D DD EE DSD S +E
Sbjct: 478 SED------EDVNMGSAAEDDESVDEDFQAESED-----DDVAEEFDSDLGGSDHNEESS 526
Query: 400 AKKESKK 406
S K
Sbjct: 527 GDDRSSK 533
>gi|50303621|ref|XP_451752.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74607465|sp|Q6CWD7.1|POB3_KLULA RecName: Full=FACT complex subunit POB3; AltName: Full=Facilitates
chromatin transcription complex subunit POB3
gi|49640884|emb|CAH02145.1| KLLA0B04906p [Kluyveromyces lactis]
Length = 555
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 130/439 (29%), Positives = 216/439 (49%), Gaps = 48/439 (10%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQ 61
+ F + K FE+ ++ T L KN++ LEF + D L+E+ ++P + +
Sbjct: 123 MVFSLNGKPTFEIPYTHINNTNLTAKNEIALEFDTQNEAYNPAGDELVEMRLYVPGTVEE 182
Query: 62 -------FVGDENHPP------------------------AQVFRDKIMSMADVGAGGEE 90
V DE A+ F +++ S AD+G +
Sbjct: 183 NEDQDQIMVKDEAEAEDGVKSEVKTEEGSEEPDVQEEKTLAEYFYEELRSKADIGEISGD 242
Query: 91 AVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVV 150
A+++F+ + TPRGRY ++++ + +RL+G+ ++K+Q+ + R+F LPK++ H +V+
Sbjct: 243 AIISFQDLFFTTPRGRYDIDIYKNSIRLRGKTYEYKLQHRQINRIFSLPKADDIHYLMVL 302
Query: 151 TLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTI 210
++DPPIR+GQT YP +VLQF+ D + +L + ++ YKDKL+ Y H V + +
Sbjct: 303 SIDPPIRQGQTSYPFLVLQFQKDEETEVQLNVEDDEFEKLYKDKLKKQYDAKTHIVLSHV 362
Query: 211 LRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYV 270
L+GL+G ++ PG+++S D AV S K +G LYPL+ +F FL KP I ++I V
Sbjct: 363 LKGLTGRRVIVPGEYKSKYDQCAVSCSYKVNEGHLYPLDNAFLFLTKPTLYIPFQDIAAV 422
Query: 271 EFERHAAGGSNMHYFDLLIRLKTEQ-EHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKT 329
R ++ FDL + ++ + F NI + E L F+ K L++ N
Sbjct: 423 NISRAGQTSTSARTFDLEVVMRANRGTTTFANISKEEQQLLETFLRSKNLRVKN-----E 477
Query: 330 TDGVAAVLQEDDDDAVDPHLERIKNEAGGDESDEEDSDFVADKDDGGSPTDDSGEE-DSD 388
LQ D I + G++ + D DF A +D DD EE DS+
Sbjct: 478 DKEAEQRLQTAFGSDSDDDDVDINMGSAGEDEESVDEDFHASDED-----DDVAEEFDSE 532
Query: 389 ASESGGE-----KEKPAKK 402
AS S E E+P+KK
Sbjct: 533 ASASDSEGETSKSERPSKK 551
>gi|395330846|gb|EJF63228.1| SSrecog-domain-containing protein [Dichomitus squalens LYAD-421
SS1]
Length = 628
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 143/420 (34%), Positives = 232/420 (55%), Gaps = 32/420 (7%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGA-NEKDSLMEISFHIPNSNT 60
L F+V K AFE+ L V+ + + G+ +V LEF + + N D ++EI F++P + T
Sbjct: 116 LAFLVSNKTAFELPLTQVANSNIAGRTEVSLEFATQNRKPSRNAPDEMVEIRFYVPGTQT 175
Query: 61 QFVGD-------------ENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRY 107
+ G E AQ F D + A++G + +++F+ + +LTPRGRY
Sbjct: 176 KSRGSDSGSQKSDVEEDGEEISAAQAFHDLVKEKAELGQVSGDIILSFDEVNVLTPRGRY 235
Query: 108 SVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIV 167
V+++ FLRL+G+ D+KI YSS+ +LFLLPK + H ++ L PIR+GQT Y ++V
Sbjct: 236 DVDMYPDFLRLRGRTYDYKIIYSSISKLFLLPKDD-LHVLFILGLSIPIRQGQTRYQYLV 294
Query: 168 LQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRS 227
+QF + + +EL M+EE + KY D+L+ +Y+ +EV + + R LS KI G F+S
Sbjct: 295 MQFNREEEITAELNMAEEEI-AKY-DRLKKNYEDPTYEVVSGVFRALSKKKIIGAGNFQS 352
Query: 228 AQDGY-AVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFER--HAAGGSNMHY 284
+DG+ +VK++LKA G L+ LEK FF+ K PTLI +I V F R + G +
Sbjct: 353 -RDGHPSVKANLKAVQGDLFLLEKYVFFVSKQPTLIELSDIHQVVFSRLGTSMGANAART 411
Query: 285 FDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDD- 343
FD+ I K+ + F ++ + E+ + ++ K +K N + +G A+ +D+D+
Sbjct: 412 FDMKIVTKSGSDLTFTSVNKEEHEVVSAYLQDKKVKTKN----EMMEGELAIGVDDEDEE 467
Query: 344 --AVDPHLERIK--NEAGGDESDEEDSDFVADKDDGGSPT--DDSGEEDSDASESGGEKE 397
+V E + G D+ E+D DF A D GSPT D E AS++ G+++
Sbjct: 468 MQSVASSGEEVPKPRRGGDDDDSEDDEDFEASDSDSGSPTESDSDSEGGQTASDASGDRD 527
>gi|328863949|gb|EGG13048.1| hypothetical protein MELLADRAFT_51330 [Melampsora larici-populina
98AG31]
Length = 529
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 120/354 (33%), Positives = 185/354 (52%), Gaps = 34/354 (9%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEF--------HVDDTTGA------NEKDS 47
L FMV K AFEV LA V + K +V LEF D +G+ D
Sbjct: 127 LAFMVAGKPAFEVPLAFVHNASIT-KTEVALEFLDQAVLQPKADGLSGSIKNARKTVTDQ 185
Query: 48 LMEISFHIPNSNTQFVGDEN------------------HPPAQVFRDKIMSMADVGAGGE 89
L+E+ ++P + + EN AQ D +M A++G
Sbjct: 186 LVELRLYVPGNASSNNAAENGTNAGSDIDDTGDGDGDGMSAAQALHDMVMDKAEIGRVQG 245
Query: 90 EAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVV 149
E +VTF + TPRGRY ++++ FLRL+G+ D+K+ YSS++RLFLLPK + H V
Sbjct: 246 EGIVTFPDVLCTTPRGRYDIDMYSDFLRLRGKTYDYKVLYSSILRLFLLPKPDDIHFNFV 305
Query: 150 VTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTT 209
V LDPPIR+GQT YP +V+QF D + +EL + +E L + ++ + +G HEV +
Sbjct: 306 VQLDPPIRQGQTRYPFLVMQFAKDEEMDAELNLDDETLTSTFQQE-HNKVEGQAHEVVSI 364
Query: 210 ILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDY 269
I +GL+ KI P F S AVK S+K +G++Y L+K F+ K P L+ ++
Sbjct: 365 IFKGLARKKIIFPQNFTSVTGQTAVKCSMKTNEGLIYFLDKYILFISKQPLLVALSDLHS 424
Query: 270 VEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMN 323
V+F R + FDL+++ K E + F ++ + E+ + ++ GKG K++N
Sbjct: 425 VKFARVGGALQSGRTFDLVLKKKDEVDLQFSSLSKEEHTVIDEYFKGKGKKVLN 478
>gi|444316642|ref|XP_004178978.1| hypothetical protein TBLA_0B06350 [Tetrapisispora blattae CBS 6284]
gi|387512018|emb|CCH59459.1| hypothetical protein TBLA_0B06350 [Tetrapisispora blattae CBS 6284]
Length = 545
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 126/425 (29%), Positives = 212/425 (49%), Gaps = 30/425 (7%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPN---- 57
+ F K FE+ ++ T L K +V +EF + + D L+E+ F++P
Sbjct: 123 MVFAYNGKPTFEIPYKRINNTNLTTKTEVAIEFDIQNEEYQPAGDELVEMRFYVPGVMED 182
Query: 58 ------SNTQFVGD------ENHPPA-------QVFRDKIMSMADVGAGGEEAVVTFEGI 98
S + G+ E PA + F +++ A++G ++V+F+ +
Sbjct: 183 EEDSQESKPKVEGEDVDGDVEMEKPAVKEKSIAENFYEELKEKAEIGEIAGASIVSFQDV 242
Query: 99 AILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRK 158
TPRGRY ++++ + +RL+G+ ++K+Q+ + R+ LPK++ H V+++++PP+R+
Sbjct: 243 FFATPRGRYDIDVYKNSIRLRGKTYEYKLQHRQIQRIISLPKADDIHHLVILSIEPPLRQ 302
Query: 159 GQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAK 218
GQT YP +VLQF+ D + EL + ++ YKD L+ SY H V + +L+GL+G K
Sbjct: 303 GQTPYPFLVLQFQKDEETEVELNLEDKEFEENYKDILKKSYDSKTHIVISHVLKGLTGRK 362
Query: 219 ITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAG 278
+ PG++ S D AV S KA +G LYPL+ +F FL KP I +I V R
Sbjct: 363 VIVPGEYISKYDQCAVSCSYKANEGYLYPLDNAFLFLTKPTLYIPFSDISAVNISRAGTS 422
Query: 279 GSNMHYFDLLIRLKTEQ-EHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVL 337
++ FDL + L+ + F NI + E L F+ K L++ N T A+
Sbjct: 423 STSSRTFDLEVVLRANRGSTTFGNISKEEQQLLETFLKSKNLRVKNEEKEAQTRLQTALG 482
Query: 338 QEDDDDAVDPHLERIKNEAGGDESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKE 397
+ D+D +D AG D+ +D + D+ + DS E S E G E
Sbjct: 483 SDSDNDDID------MGSAGEDDESADDEFKASSSDEDVAEEFDSQAEMSSDEEEGSGDE 536
Query: 398 KPAKK 402
+P+KK
Sbjct: 537 RPSKK 541
>gi|401881111|gb|EJT45416.1| subunit of the heterodimeric FACT complex, Pob3p [Trichosporon
asahii var. asahii CBS 2479]
Length = 551
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 119/352 (33%), Positives = 192/352 (54%), Gaps = 21/352 (5%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEK--DSLMEISFHIPNSN 59
L F V K AFE+ L+ V+ + + GKN+V +EF G N + D L+EI F++P +
Sbjct: 88 LAFEVQHKTAFELPLSQVANSNIAGKNEVSIEFMPKTFEGNNARDPDELVEIRFYVPGKS 147
Query: 60 TQF----VGDENHP------------PAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTP 103
+ G + P A+ + I AD+GA +++V FE + +LTP
Sbjct: 148 KKPKGSDAGSDEEPETDVDEEGNEISAAEAMHNMIKDKADIGAAVGDSIVVFEEVLVLTP 207
Query: 104 RGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLY 163
RGR+S+E LRL G++ D+++ +SS+ R+FLLPK + H +V+ LDPPIR+G T Y
Sbjct: 208 RGRFSLEFFHESLRLLGKSTDYRVPFSSINRIFLLPKLDDLHIQLVLGLDPPIRQGATRY 267
Query: 164 PHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPG 223
+V Q+ D V +EL + +E + KY D + Y+ +V + +L+ L+G K+T PG
Sbjct: 268 LFLVAQWPKDEEVDAELNLDDEEI-AKYPDLQKKKYEAPTFQVISRVLKSLTGKKVTPPG 326
Query: 224 KFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMH 283
FR+AQ +K+++KA G LY LEK F+ K P LI + + + F R G ++
Sbjct: 327 NFRNAQGVNGIKANVKAVQGELYFLEKGLIFIAKQPILIDFSKTESISFSRVGGGVASAR 386
Query: 284 YFDLLIRLKT-EQEHLFRNIQRNEYHNLFDFISGKGLKIMN-LGDMKTTDGV 333
FD+ + KT +F I + E + F++ K +++ N + D+ D V
Sbjct: 387 TFDMRVTSKTGTVPTVFSAISKEEAGPISQFLASKNVRLKNEIDDVMDVDAV 438
>gi|1806648|gb|AAB41544.1| structure-specific recognition protein 1 [Bos taurus]
Length = 460
Score = 197 bits (502), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 133/374 (35%), Positives = 198/374 (52%), Gaps = 25/374 (6%)
Query: 147 FVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEV 206
F V++LDPPI++GQT Y ++L F D + L M+EE + +++ +L + G ++E+
Sbjct: 5 FFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFEGRLTKNMSGSLYEM 64
Query: 207 FTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEE 266
+ +++ L KIT PG F+ + S KA G+LYPLE+ F ++ KPP I +E
Sbjct: 65 VSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFIYVHKPPVHIRFDE 124
Query: 267 IDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGD 326
I +V F R G + FD I K ++ F +I+R EY LFDF++ K L I N G
Sbjct: 125 ISFVNFAR---GTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVNAKKLNIKNRGL 181
Query: 327 MKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDESDEEDSDFVADKDDGGSPTDDSGEE- 385
+ + + D+D D +LER+K E E + DS DD G TD+S
Sbjct: 182 KEGMNPSYDEYADSDEDQHDAYLERMKEEGKIREENANDSS-----DDSGEETDESFNPG 236
Query: 386 ----------DSDASESGGEKEKPAKKESKKESSSVKASTSK-KKSRDGDEDGKKKKQKK 434
DS+AS S KE + +E KK KA +K +KSR K + KK
Sbjct: 237 EEEEDVAEEFDSNASASSSSKEGDSDREEKKRKQLKKAKMAKDRKSRK-----KPLEVKK 291
Query: 435 KKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKA 494
KDPNAPKR MS ++ + RE IK +PGI+ TD+ + GE WK MS E++E ++ KA
Sbjct: 292 GKDPNAPKRPMSAYMLWLNASREKIKSDHPGISVTDLSKKAGEIWKGMSKEKKEEWDRKA 351
Query: 495 RADKKRYKDEISGY 508
++ Y+ + Y
Sbjct: 352 EDARREYEKAMKEY 365
>gi|388507422|gb|AFK41777.1| unknown [Lotus japonicus]
Length = 179
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 123/176 (69%), Positives = 137/176 (77%), Gaps = 1/176 (0%)
Query: 282 MHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDD 341
MHYFDLLIRLK+EQEHLFRNIQRNEY NL FI K LKIMNLG + T G+A VL+ D
Sbjct: 1 MHYFDLLIRLKSEQEHLFRNIQRNEYDNLLSFIRSKSLKIMNLGGAQPTVGMAQVLENDH 60
Query: 342 DDAVDPHLERIKNEAGGDESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAK 401
DDAVDPHLERIKNEAGGDESDEED DFV DKDDGGSPTD+SG EDSDAS+SG EKEKPAK
Sbjct: 61 DDAVDPHLERIKNEAGGDESDEEDEDFVVDKDDGGSPTDESGGEDSDASDSGDEKEKPAK 120
Query: 402 KESKKESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERE 457
E KK SS KAS SK+KS+D DEDGKKKK ++K + + + FS +RE
Sbjct: 121 VEPKKVLSS-KASNSKRKSKDADEDGKKKKTEEKGPKCTQEGNVWFHVLFSNGKRE 175
>gi|409042168|gb|EKM51652.1| hypothetical protein PHACADRAFT_177070 [Phanerochaete carnosa
HHB-10118-sp]
Length = 508
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 125/325 (38%), Positives = 185/325 (56%), Gaps = 23/325 (7%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEF----HVDDTTGANEKDSLMEISFHIPN 57
L F+V K AFE+ LA V+ + + G+ +V LE+ VD + D L EI F++P
Sbjct: 122 LVFLVSNKTAFELPLAKVANSNIAGRTEVSLEYPVAAQVDKKASRHGPDELTEIRFYVPG 181
Query: 58 SNTQFV-----GDENH-------PPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRG 105
++T+ G +N AQ F D I A++G + +++FE + +LTPRG
Sbjct: 182 THTKEARGSEEGSQNSEDEGEEISAAQAFHDVIKEKAEIGQVTGDIILSFEEVLVLTPRG 241
Query: 106 RYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPH 165
RY V++ FLRL+G+ D+KI Y+++ +LFLLPK + H ++ L PIR+GQT Y +
Sbjct: 242 RYDVDMFRDFLRLRGKTYDYKILYTTIAKLFLLPKDDM-HVLFILGLSTPIRQGQTRYQY 300
Query: 166 IVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKF 225
+V+QF D +EL M EE + KY D+L+ SY EV + + R LSG KI G F
Sbjct: 301 LVMQFSRDEESTAELNMPEEEVE-KY-DRLKKSYDEPTFEVVSGVFRALSGRKIIGAGSF 358
Query: 226 RSAQDGY-AVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAA--GGSNM 282
+S +DG+ A+K++LKA G L+ LEK FF+ K PTLI +I + F R A G +
Sbjct: 359 QS-RDGHPALKANLKAVQGDLFLLEKYIFFVSKTPTLIDLSDIHQIVFSRLGAGVGATAA 417
Query: 283 HYFDLLIRLKTEQEHLFRNIQRNEY 307
FDL I K+ E F +I + E+
Sbjct: 418 RTFDLKIVTKSGPEFTFTSINKEEH 442
>gi|294944207|ref|XP_002784140.1| structure-specific recognition protein, putative [Perkinsus marinus
ATCC 50983]
gi|239897174|gb|EER15936.1| structure-specific recognition protein, putative [Perkinsus marinus
ATCC 50983]
Length = 521
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/319 (36%), Positives = 181/319 (56%), Gaps = 20/319 (6%)
Query: 11 AFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFVGDENHPP 70
AFE+ D++Q GKN+V LEFHVDDT A++ +SL+E+ F IPN
Sbjct: 130 AFEIQATDIAQVVPTGKNEVALEFHVDDTRDADD-ESLVEMRFFIPNEEY---------- 178
Query: 71 AQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYS 130
A +D+++ + GG + F I I+ PRG Y +++ S +L+G++ D+ I+Y
Sbjct: 179 AAKLKDELIQKSGAATGGGTTICQFLNIPIVLPRGHYDLDMFRSSFKLRGKSFDYTIKYM 238
Query: 131 SVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL--LMSEELLN 188
+V R+F+LPK + H V+ LD P+R+G T Y +V+Q++ + V+ L +EEL
Sbjct: 239 NVSRMFMLPKPDSVHVSFVLGLDQPVRQGNTAYSFLVMQYDKEREVEDLAINLDAEEL-- 296
Query: 189 TKYKDKLEPSYKG-LIHEVFTTILRGLSGAKITKPGKFRSAQDGY-AVKSSLKAEDGVLY 246
K KL+ G ++ V + + ++G + P + A +GY V+ S KA DG LY
Sbjct: 297 --EKCKLQKVVNGEKLYAVMGQLFKHMTGKNVVTPCQDFKASNGYNCVRCSHKANDGFLY 354
Query: 247 PLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTE-QEHLFRNIQRN 305
PL+KSF F+ KP I ++++ VEF R +G + YFDL + K E Q H F+ + R+
Sbjct: 355 PLKKSFLFVNKPVMWIRYDDVLAVEFSRADSGFTQTRYFDLKVYRKGEGQPHDFQQMDRS 414
Query: 306 EYHNLFDFISGKGLKIMNL 324
EY+ L +FI G++I NL
Sbjct: 415 EYNGLIEFIQKAGIRIRNL 433
>gi|294897373|ref|XP_002775953.1| structure-specific recognition protein, putative [Perkinsus marinus
ATCC 50983]
gi|239882320|gb|EER07769.1| structure-specific recognition protein, putative [Perkinsus marinus
ATCC 50983]
Length = 525
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 113/321 (35%), Positives = 183/321 (57%), Gaps = 18/321 (5%)
Query: 7 GQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFVGDE 66
G + A+E+ D++Q GKN+V LEFHVDDT A++ +SL+E+ F IPN
Sbjct: 127 GNEMAYEIQATDIAQVVPTGKNEVALEFHVDDTRDADD-ESLVEMRFFIPNEEY------ 179
Query: 67 NHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFK 126
A +D+++ + +GG V F I I+ PRG Y +++ S +L+G++ D+
Sbjct: 180 ----AAKLKDELIQKSGAASGGGTTVCQFLNIPIVLPRGHYDLDMFRSSFKLRGKSFDYT 235
Query: 127 IQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELL-MSEE 185
I+Y +V R+F+LPK + H V+ LD P+R+G T Y +V+Q++ + V+ + + +E
Sbjct: 236 IKYMNVSRMFMLPKPDSVHISFVLGLDQPVRQGNTAYSFLVMQYDKEREVEDLAINLDDE 295
Query: 186 LLNTKYKDKLEPSYKG-LIHEVFTTILRGLSGAKITKPGKFRSAQDGY-AVKSSLKAEDG 243
L K KL+ G ++ V + + ++G + P + A +GY V+ S KA DG
Sbjct: 296 ELE---KCKLQKVVNGEKLYAVMGQLFKHMTGKNVVTPCQDFKASNGYNCVRCSHKANDG 352
Query: 244 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTE-QEHLFRNI 302
LYPL+KSF F+ KP I ++++ VEF R +G + YFDL + K E Q H F+ +
Sbjct: 353 FLYPLKKSFLFVNKPVMWIRYDDVLAVEFSRADSGFTQTRYFDLKVYRKGEGQPHDFQQM 412
Query: 303 QRNEYHNLFDFISGKGLKIMN 323
R+EY+ L +FI G++I N
Sbjct: 413 DRSEYNGLIEFIQKAGIRIRN 433
>gi|164659240|ref|XP_001730744.1| hypothetical protein MGL_1743 [Malassezia globosa CBS 7966]
gi|159104642|gb|EDP43530.1| hypothetical protein MGL_1743 [Malassezia globosa CBS 7966]
Length = 597
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 122/339 (35%), Positives = 194/339 (57%), Gaps = 6/339 (1%)
Query: 71 AQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYS 130
A F + I + AD+G + ++ + + ILTPRGRY ++L +FLRL+G+ D+KI YS
Sbjct: 260 ALAFHNAIKAKADIGQVAGDGILVLKEVLILTPRGRYDIDLFPTFLRLRGKTYDYKILYS 319
Query: 131 SVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTK 190
S+ +LFLLPK + H +V LDPP+R+GQT YP +VLQF + + +EL + EE + TK
Sbjct: 320 SITQLFLLPKPDDIHVLFIVALDPPVRQGQTRYPFLVLQFPREEEMDAELNLDEETIQTK 379
Query: 191 YKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEK 250
Y+ KL+ Y+ + T + R S K+ P F ++ +V+ ++KA DG+LYPL K
Sbjct: 380 YEGKLKKRYEEPTFRIVTNLFRVFSQQKVHVPTGFTNSTGQESVRCNVKANDGMLYPLNK 439
Query: 251 SFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNL 310
S ++ K P LI + ++ F R ++ FDL + L+ +H F++I R E +L
Sbjct: 440 SLIWVSKQPILISYHDVHQFVFSRVGGAIASAKTFDLRVELQHGTDHTFQSISREELDSL 499
Query: 311 FDFISGKGLKIMN-LGD--MKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDESDEEDSD 367
+F + + L++ N L D M V +L EDD++ R ++ D+ +E++
Sbjct: 500 NNFFAERKLRVKNELTDEAMGVGAAVDELLGEDDENVTSGKRGR-GDDEDDDDEEEDEDF 558
Query: 368 FVADKDDGGSPTDDSG-EEDSDASESGGEKEKPAKKESK 405
+DDGGSP++ S +ED DA S E EKP K+ +
Sbjct: 559 EAESEDDGGSPSEASSDDEDGDAVVS-EEDEKPKPKKPR 596
>gi|403159751|ref|XP_003320329.2| hypothetical protein PGTG_01241 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375168228|gb|EFP75910.2| hypothetical protein PGTG_01241 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 596
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 124/360 (34%), Positives = 191/360 (53%), Gaps = 27/360 (7%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEF-------HVDDTTG---ANEK----DS 47
L F+V K AFEV L V + + K +V +EF +D +G N K D
Sbjct: 127 LAFLVAGKLAFEVPLGLVHNSSI-SKTEVAVEFLDQANQPKLDGLSGISRVNAKKSTTDQ 185
Query: 48 LMEISFHIP----------NSNTQFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEG 97
L+E+ ++P NS D AQ D IM A++G E +VTF
Sbjct: 186 LVEMRLYVPGNASTNANEGNSEADDPADGELSAAQALHDLIMEKAEIGRVQGEGIVTFPD 245
Query: 98 IAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIR 157
+ TPRGRY +++H FLRL+G+ D+K+ YSS+ +LFLLPK + H VV LDPPIR
Sbjct: 246 VLCTTPRGRYDLDMHADFLRLRGKTYDYKVLYSSIQKLFLLPKPDDIHFLFVVQLDPPIR 305
Query: 158 KGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGA 217
+GQT YP +V+QF D + +E+ + E+ LN+ ++ + + +G HEV + + +GL+
Sbjct: 306 QGQTRYPFLVMQFAKDEEIDAEMNLDEDTLNSTFQ-QTDNKIEGQAHEVVSIVFKGLAKK 364
Query: 218 KITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAA 277
KI P F SA A+K ++KA +G+LY L+K + K LI ++ V+F R
Sbjct: 365 KIIFPQNFSSANGQSAIKCNMKANEGLLYFLDKYVLCISKQSILINLADLHSVKFARVGG 424
Query: 278 GGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMN-LGDMKTTDGVAAV 336
+ FDL++ K E + F ++ R E+ + + KG KI N + + ++ VAA+
Sbjct: 425 ALQSGRTFDLVLTKKDEVDLQFSSLSREEHPVIESYFETKGKKIENEMNEDILSNAVAAL 484
>gi|254579162|ref|XP_002495567.1| ZYRO0B14410p [Zygosaccharomyces rouxii]
gi|238938457|emb|CAR26634.1| ZYRO0B14410p [Zygosaccharomyces rouxii]
Length = 574
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 108/340 (31%), Positives = 190/340 (55%), Gaps = 14/340 (4%)
Query: 66 ENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDF 125
E A+ F +++ AD+G +++V+F+ + TPRGRY ++++ + +RL+G+ ++
Sbjct: 242 EEKTAAEAFHEELKEKADIGEVSGDSIVSFQDVFFATPRGRYDIDIYKNSIRLRGKTYEY 301
Query: 126 KIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEE 185
K+Q+ + R+ LPK++ + VV++++PP+R+GQT YP +VLQF+ D + +L + +E
Sbjct: 302 KLQHRQIQRIVSLPKADDINHLVVLSIEPPLRQGQTTYPFLVLQFQKDEETEVQLNLEDE 361
Query: 186 LLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVL 245
YKDKL+ Y H V + +L+GL+G ++ PG+++S D AV S KA +G L
Sbjct: 362 DFEANYKDKLKREYDAKTHIVVSHVLKGLTGRRVMVPGEYKSKYDQCAVSCSYKANEGYL 421
Query: 246 YPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQ-EHLFRNIQR 304
YPL+ +FFFL KP I ++ V R ++ FDL + L+ + F NI +
Sbjct: 422 YPLDNAFFFLTKPTLYIPFMDVSSVNISRAGQASTSSRTFDLEVTLRGNRGSTTFANISK 481
Query: 305 NEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDESDEE 364
E L F+ + L++ N D + + + + L D D+ I + G++ +
Sbjct: 482 EEQQLLEQFLKARNLRVKN-EDKEAQERLQSALGSDSDEG------DINMGSAGEDEESA 534
Query: 365 DSDFVADKDDGGSPTDDSGEEDSDASESGGEKE--KPAKK 402
D +F AD +D DD EE + A++ E+E +P+KK
Sbjct: 535 DEEFRADSEDD----DDLAEEYNSAADDSSEEEEDRPSKK 570
>gi|429856407|gb|ELA31316.1| structure-specific recognition protein [Colletotrichum
gloeosporioides Nara gc5]
Length = 547
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 114/351 (32%), Positives = 183/351 (52%), Gaps = 50/351 (14%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHV---DDTTGAN--------------- 43
L F V + AFE+ +++S T L G+N+V +EF + TG N
Sbjct: 118 LAFHVQNRPAFEIPYSEISNTNLAGRNEVAVEFSAPTDKNDTGTNGALGGARGKGKKAGA 177
Query: 44 EKDSLMEISFHIPNS---------NTQFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVT 94
KD L+E+ F+IP + T G+E +F D +M A++G + + T
Sbjct: 178 GKDQLVEMRFYIPGTVKKEADGEDGTSDAGEEEKNAVALFYDTLMEKAEIGETAGDTIAT 237
Query: 95 FEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDP 154
F I LTPRGR+ ++++ + RL+G+ D+KIQY ++ + +LPK ++ H
Sbjct: 238 FLDILHLTPRGRFDIDMYDASFRLRGKTYDYKIQYDAIKKFMVLPKPDETH--------- 288
Query: 155 PIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGL 214
VL F+ D V +L ++EE ++ +YKD+L+P Y+ +H+V T I RGL
Sbjct: 289 ------------VLLFKKDEEVTIDLNLTEEQIDERYKDRLQPHYEQPLHQVITYIFRGL 336
Query: 215 SGAKITKPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFE 273
+ K+T P K F++ + + +K S+KA +G LY LEK+F F+PKP T I +E+ V F
Sbjct: 337 ANKKVTTPAKDFQTHRQQFGIKCSIKASEGFLYCLEKAFMFVPKPATYIAYEQTASVTFS 396
Query: 274 RHAAGGSNMHYFDLLIRLKT-EQEHLFRNIQRNEYHNLFDFISGKGLKIMN 323
R S + FD+ +++K F NI R + L +F KGL++ N
Sbjct: 397 RVGGAVSALSTFDITVQMKNGAGSSQFSNINREDLKGLEEFFRLKGLRVKN 447
>gi|323347068|gb|EGA81343.1| Pob3p [Saccharomyces cerevisiae Lalvin QA23]
Length = 474
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 107/346 (30%), Positives = 182/346 (52%), Gaps = 30/346 (8%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPN---- 57
+ F + K FE+ A ++ T L KN+V +EF++ D D L+E+ F+IP
Sbjct: 123 MVFALNGKPTFEIPYARINNTNLTSKNEVGIEFNIQDEEYQPAGDELVEMRFYIPGVIQT 182
Query: 58 -----------SNTQFV--------------GDENHPPAQVFRDKIMSMADVGAGGEEAV 92
S+ + V E A+ F +++ AD+G +A+
Sbjct: 183 NVDENMTKKEESSNEVVPKKEDGAEGEDVQMAVEEKSMAEAFYEELKEKADIGEVAGDAI 242
Query: 93 VTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTL 152
V+F+ + TPRGRY ++++ + +RL+G+ ++K+Q+ + R+ LPK++ H +V+ +
Sbjct: 243 VSFQDVFFTTPRGRYDIDIYKNSIRLRGKTYEYKLQHRQIQRIVSLPKADDIHHLLVLAI 302
Query: 153 DPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILR 212
+PP+R+GQT YP +VLQF+ D + +L + +E YKDKL+ Y H V + +L+
Sbjct: 303 EPPLRQGQTTYPFLVLQFQKDEETEVQLNLEDEDYEENYKDKLKKQYDAKTHIVLSHVLK 362
Query: 213 GLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEF 272
GL+ ++ PG+++S D AV S KA +G LYPL+ +FFFL KP I ++ V
Sbjct: 363 GLTDRRVIVPGEYKSKYDQCAVSCSFKANEGYLYPLDNAFFFLTKPTLYIPFSDVSMVNI 422
Query: 273 ERHAAGGSNMHYFDLLIRLKTEQ-EHLFRNIQRNEYHNLFDFISGK 317
R ++ FDL + L++ + F NI + E L F+ K
Sbjct: 423 SRAGQTSTSSRTFDLEVVLRSNRGSTTFANISKEEQQLLEQFLKSK 468
>gi|390603469|gb|EIN12861.1| SSrecog-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 607
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 143/421 (33%), Positives = 219/421 (52%), Gaps = 47/421 (11%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQ 61
L F+V K +FE+ L V+ + + G+ +V LEF + T + + D L+EI F++P ++T+
Sbjct: 116 LAFLVSNKTSFELPLNHVANSNIAGRTEVSLEF-ANLPTPSKKADELVEIRFYVPGTHTK 174
Query: 62 FVGDENHP--------------PAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRY 107
G + AQ F D I A++G + ++ FE + +LTPRGRY
Sbjct: 175 TRGSDAGSQQSENEEEDGEEISAAQAFHDAIKEKAEIGQVAGDIILGFEEVLVLTPRGRY 234
Query: 108 SVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIV 167
V++ FLRL+G+ D+KI Y+++ R+FLLPK +Q F+V QT Y ++V
Sbjct: 235 DVDMFPEFLRLRGKTYDYKIIYTTIQRMFLLPKDDQHVLFIV---------SQTRYQYLV 285
Query: 168 LQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRS 227
+QF + + +EL +SEE + KY D+L+ +Y+ EV + + R LSG KI G F+S
Sbjct: 286 MQFNREEEITAELNLSEEEI-AKY-DRLKKNYEDPTFEVVSGVFRALSGKKIIGVGTFQS 343
Query: 228 AQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFER--HAAGGSNMHYF 285
+K +LKA G L+ LEK FF+ K P LI +I V F R G + F
Sbjct: 344 RHGHPGIKCNLKAIQGDLFMLEKYVFFVSKSPMLIEISDIHQVVFSRVGSGMGATAARTF 403
Query: 286 DLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMN--LGDMKTTDGVAAVLQED--- 340
DL I K+ E+ F I ++E+ F+ K +++ N + D+ G V ED
Sbjct: 404 DLKIVTKSGPEYTFTAINKDEHEPTEAFLKDKKVRVKNEMMQDVDMLLGPPGVDDEDEEM 463
Query: 341 ------DDDAVDPHLERIKNEAGGDESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGG 394
D++A P L G D+ EED DF A D GSPTD S +DSD +++
Sbjct: 464 QSVASSDEEAPKPRL------GGDDDDSEEDEDFQASDTDAGSPTDTS--DDSDGAKTAS 515
Query: 395 E 395
+
Sbjct: 516 D 516
>gi|209878187|ref|XP_002140535.1| FACT complex subunit SSRP1 [Cryptosporidium muris RN66]
gi|209556141|gb|EEA06186.1| FACT complex subunit SSRP1, putative [Cryptosporidium muris RN66]
Length = 538
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 103/314 (32%), Positives = 183/314 (58%), Gaps = 10/314 (3%)
Query: 14 VSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFVGDENHPPAQV 73
+ ++Q L K++++LEF + + N+ D L+EI F IPN + +N ++
Sbjct: 136 IPTTQINQIALPSKSEMVLEFSGETNSEEND-DKLVEIRFFIPNIDQN--ETDNSSKVEL 192
Query: 74 FRDKIMSMADVGAGGE-EAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSV 132
R+++ ++ +G+ G + V + I ++ PRGRY +E+ ++ ++L G++ D+ I Y S+
Sbjct: 193 LRNQLTLLSGIGSSGSVDKVCRWNDIHLIVPRGRYEIEVLVNSMKLHGKSFDYTILYQSI 252
Query: 133 VRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFET--DYVVQSELLMSEELLNTK 190
R+FLLP+ H +V+ L+ P+R+G T YP IV+QF+T D ++ L +SE+ +
Sbjct: 253 SRMFLLPRPGVTHINLVIALETPVRQGNTKYPFIVIQFDTQQDEDIEIPLNLSEK--EIQ 310
Query: 191 YKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEK 250
+ L G ++ T I + L+G I PG FRSA + ++ S KA+DG+LYPL +
Sbjct: 311 RFNGLSTVMVGRFWDIVTRIFKALTGRPIVVPGDFRSASSYHCIRCSFKAQDGLLYPLNR 370
Query: 251 SFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNL 310
SF F+ KP +I ++EI +EF R + G+ +F+L + +K ++ F +I + EY+ L
Sbjct: 371 SFIFITKPVIMIRYDEILNIEFSRMS--GNQTRFFELFVTIKGGGDYSFTSIDKAEYNPL 428
Query: 311 FDFISGKGLKIMNL 324
F+ K ++I NL
Sbjct: 429 IKFLQEKNIRIRNL 442
>gi|324504618|gb|ADY41993.1| FACT complex subunit SSRP1-A [Ascaris suum]
Length = 422
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 114/312 (36%), Positives = 170/312 (54%), Gaps = 15/312 (4%)
Query: 49 MEISFHIPNSNTQFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYS 108
ME+ FHIP T DE+ P + FR +M A + ++ V T + I TPRGRY
Sbjct: 1 MEMRFHIP---TDPDADEDADPVEEFRRAVMQYAGIETETDQPVATLQQILCTTPRGRYD 57
Query: 109 VELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVL 168
++++ + L L G+ D+KI +++RLFLLP + H + V++L+PPIR+GQT Y +VL
Sbjct: 58 IKVYQNHLSLHGKTYDYKIPIKTIMRLFLLPHKDGRHMYFVISLNPPIRQGQTRYHFLVL 117
Query: 169 QFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSA 228
+F D V+ +L +++E L +YK KL+ G + EV + I R + KIT PG F
Sbjct: 118 EFAKDEEVELDLGLTQEQLKEQYKGKLDKKLSGNVFEVVSKIFRVMVDMKITVPGSFVGH 177
Query: 229 QDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLL 288
A+ + K G LYPLEK F ++ KPP I EEI V F R + FD
Sbjct: 178 SGTPAIMCAHKQASGFLYPLEKGFVYVHKPPMYIRFEEISSVNFARSDVSTRS---FDFE 234
Query: 289 IRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQED----DDDA 344
+ +K +F ++++ EY+ LFDF++ K L+I N M + ED DD
Sbjct: 235 VEMKGGSTLVFNSVEKEEYNRLFDFVNNKHLRIRNAKRMDKPN-----YSEDKFAGSDDE 289
Query: 345 VDPHLERIKNEA 356
+DP+ E +K EA
Sbjct: 290 IDPYKETVKQEA 301
>gi|308467293|ref|XP_003095895.1| CRE-HMG-4 protein [Caenorhabditis remanei]
gi|308244266|gb|EFO88218.1| CRE-HMG-4 protein [Caenorhabditis remanei]
Length = 737
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 155/514 (30%), Positives = 256/514 (49%), Gaps = 48/514 (9%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIP-NSNT 60
+ F K FE+ +VS KN+ +LEFH +D N + SLME+ FH+P ++ T
Sbjct: 118 IEFSWEDKPIFEIPCTNVSNVTAN-KNEAVLEFHQND----NSQVSLMEMRFHMPVDAET 172
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
+ ++ + F+ +++ A + A E+ + I TPRGRY ++++ + + L G
Sbjct: 173 E----DDVDKVEEFKKAVLAFAGLEAEAEQPICLLTDILCTTPRGRYDIKVYPTSIALHG 228
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI S+ RLFL+P + F V++L+PPIR+GQT Y ++++ F D EL
Sbjct: 229 KTYDYKIPIKSINRLFLVPHKDGRSVFFVLSLNPPIRQGQTRYSYLIMDFPKDEEQDLEL 288
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
+++E L + LE + +G +++ + I + + KIT+PG+F A++ + +
Sbjct: 289 ALTDEQL-AQSNGALERTMEGALYKTVSAIFKSICNLKITEPGRFIGHSGTPAIQCTHRQ 347
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G+LYPLEK F F+ KP I E++ R + GG+ D + LK+ +F
Sbjct: 348 NPGLLYPLEKGFLFIHKPAMYIRFEDVSSCHLAR-SDGGTVTRTVDFEVDLKSGAPIIFN 406
Query: 301 NIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAV--------------- 345
+++ E + LFD++S K +KI N +++ ++ + D A
Sbjct: 407 AMEKEENNKLFDYLSKKSIKIRNPARVESRAAESSDEEPDRYKAAVKAEGLQKDDDSDDE 466
Query: 346 -------DPHLERIKNEAGGDESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEK 398
D L+R K E E + D D+ D GS D SG + SE E E
Sbjct: 467 TDEDYDLDQDLKRKKTEKDSSEGSASEPD---DEYDSGSEQDSSG---TGESEPESESET 520
Query: 399 PAKKESKKESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMEREN 458
PAKK + E + KK+ + + KK KK+KDPNAPKRA + + + R
Sbjct: 521 PAKKSKRSEPREKREKKEKKEGK------RGKKDKKEKDPNAPKRASTAYFQWFTANRLK 574
Query: 459 IKKSNPGIAFTDVGRVLGERWKKMSVEEREPYES 492
IK+ +A DV + G +WK MS EE++ +S
Sbjct: 575 IKEDGDSVA--DVAKKGGAKWKSMSAEEKKVLKS 606
>gi|124809408|ref|XP_001348567.1| structure specific recognition protein [Plasmodium falciparum 3D7]
gi|23497463|gb|AAN37006.1| structure specific recognition protein [Plasmodium falciparum 3D7]
Length = 506
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 103/321 (32%), Positives = 179/321 (55%), Gaps = 12/321 (3%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQ 61
L F + K AF + +++Q +Q K D+ +EF D+ +D L EI F+ P+ N
Sbjct: 130 LCFDIDNKYAFNLPTNNINQLNVQIKTDIAMEFKNDENNNKGNEDFLAEIRFYYPHEN-- 187
Query: 62 FVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQ 121
DEN Q ++ ++ ++G E++ + I +L PRGRY +E++ S +L G+
Sbjct: 188 ---DENQN-FQNLKNDLLEKVNIGDTKSESIASLSNIPLLVPRGRYDIEMYSSTFKLHGK 243
Query: 122 ANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELL 181
+ DF IQY+++ ++ L+PKSN ++ +L +++GQT YP I++Q D ++ ++
Sbjct: 244 SYDFNIQYTNINKMILVPKSNSNQYVLIFSLSNKMKQGQTEYPFILIQLNNDDDMELDIS 303
Query: 182 MSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAE 241
S+E++ TKY KLE + G H+V T + L + PG +R++++ + + S +A
Sbjct: 304 ASDEVM-TKY--KLEKTISGKAHDVVTKLFTALVNKNVIVPGDYRTSKNQHGITCSYRAA 360
Query: 242 DGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMH-YFDLLIRLKTEQEHLFR 300
G LYPL K F F+ KP LI ++I + F+R G N H +F L+I+ K + +
Sbjct: 361 SGQLYPLNKYFLFIVKPVILISFDDIVTLSFQR--TGNINQHRFFSLIIKHKRGMSYEYT 418
Query: 301 NIQRNEYHNLFDFISGKGLKI 321
NI ++EY+ L F+ K + I
Sbjct: 419 NIDKSEYNPLLTFLKSKNINI 439
>gi|221486868|gb|EEE25114.1| structure specific recognition protein, putative [Toxoplasma gondii
GT1]
Length = 539
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 178/324 (54%), Gaps = 11/324 (3%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQ 61
L V AF++ +++Q KND+ +E DDT E D L+E+ F+ P
Sbjct: 143 LQLTVDGCAAFDIHAQEIAQVTTPSKNDLAIELIQDDTRDQQE-DQLLEVRFYQP----- 196
Query: 62 FVGDEN-HPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
F GD++ P Q + K++ + V ++V + +L PRGRY +++ L+ G
Sbjct: 197 FAGDDDAEGPLQQLKQKLVKKSGVAETKMDSVALLNDVPLLVPRGRYEIDIGRRALKFHG 256
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
++ D+ IQYSS+ R+FL+P+ N PH +++L+ +R+GQT YP +V+QF+++ V ++
Sbjct: 257 KSYDYTIQYSSINRMFLVPRPNSPHVNFILSLENAMRQGQTSYPFVVMQFDSESVHSVDV 316
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
+ L + +KL +G V T + R L G + PG F+S + + + S +A
Sbjct: 317 NLEPAELQQRGLEKL---IEGKTFHVVTRLFRALVGKSVIVPGDFKSVKQQFGIACSYRA 373
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
+ G LYPL +SF F+ KP I ++++ VEF R A +N +F + ++ E+ F
Sbjct: 374 QSGHLYPLNRSFLFIVKPVIFIRYDDVVSVEFSRTGASTTN-RFFAFTVSVRGGGEYEFT 432
Query: 301 NIQRNEYHNLFDFISGKGLKIMNL 324
+I RNEY L DF+ KG++I N+
Sbjct: 433 SIDRNEYKPLVDFLMEKGIRIKNM 456
>gi|237831963|ref|XP_002365279.1| structure specific recognition protein I, putative [Toxoplasma
gondii ME49]
gi|211962943|gb|EEA98138.1| structure specific recognition protein I, putative [Toxoplasma
gondii ME49]
gi|221506561|gb|EEE32178.1| structure specific recognition protein, putative [Toxoplasma gondii
VEG]
Length = 539
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 178/324 (54%), Gaps = 11/324 (3%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQ 61
L V AF++ +++Q KND+ +E DDT E D L+E+ F+ P
Sbjct: 143 LQLTVDGCAAFDIHAQEIAQVTTPSKNDLAIELIQDDTRDQQE-DQLLEVRFYQP----- 196
Query: 62 FVGDEN-HPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
F GD++ P Q + K++ + V ++V + +L PRGRY +++ L+ G
Sbjct: 197 FAGDDDAEGPLQQLKQKLVKKSGVAETKMDSVALLNDVPLLVPRGRYEIDIGRRALKFHG 256
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
++ D+ IQYSS+ R+FL+P+ N PH +++L+ +R+GQT YP +V+QF+++ V ++
Sbjct: 257 KSYDYTIQYSSINRMFLVPRPNSPHVNFILSLENAMRQGQTSYPFVVMQFDSESVHSVDV 316
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
+ L + +KL +G V T + R L G + PG F+S + + + S +A
Sbjct: 317 NLEPAELQQRGLEKL---IEGKTFHVVTRLFRALVGKSVIVPGDFKSVKQQFGIACSYRA 373
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
+ G LYPL +SF F+ KP I ++++ VEF R A +N +F + ++ E+ F
Sbjct: 374 QSGHLYPLNRSFLFIVKPVIFIRYDDVVSVEFSRTGASTTN-RFFAFTVSVRGGGEYEFT 432
Query: 301 NIQRNEYHNLFDFISGKGLKIMNL 324
+I RNEY L DF+ KG++I N+
Sbjct: 433 SIDRNEYKPLVDFLMEKGIRIKNM 456
>gi|339233218|ref|XP_003381726.1| FACT complex subunit Ssrp1 [Trichinella spiralis]
gi|316979424|gb|EFV62220.1| FACT complex subunit Ssrp1 [Trichinella spiralis]
Length = 773
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 124/367 (33%), Positives = 192/367 (52%), Gaps = 22/367 (5%)
Query: 12 FEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFVGDEN--HP 69
F++ LA+V+ KN+VI+EF+ +D SLME+ +I GD N
Sbjct: 176 FDIPLANVNNCS-SAKNEVIMEFNQNDECAV----SLMEMRLYIS-------GDPNTEED 223
Query: 70 PAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQY 129
PA+ F+ KI A + + E + TPRGRY ++++ + L L G+ D+KI
Sbjct: 224 PAEEFKRKIAEKAGFLKESGKELAVLEQVLCATPRGRYDIKIYPTMLALHGKTFDYKIPI 283
Query: 130 SSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNT 189
SS++RLFLLP + F V+ LDPP+++GQT Y +++ D V EL + E++L
Sbjct: 284 SSILRLFLLPHQDGRRMFFVIGLDPPVKQGQTRYHFLIMDILKDDEVDLELGLPEDVLKE 343
Query: 190 KYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLE 249
KY +L G + E+ + I++ L +IT PG F AV + K+ G LYPL+
Sbjct: 344 KYNGELPRQLSGPLFEIISRIMKCLVRKQITVPGNFVGHTGTPAVGCAYKSAGGFLYPLQ 403
Query: 250 KSFFFLPKPPTLILHEEIDYVEFER-HAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYH 308
F ++ KPP + EEI + F R H S FD I+ K F +I + EY
Sbjct: 404 HGFLYVHKPPVYVRLEEISCINFARSHVTTKS----FDFEIQTKQGNIFTFTSIMKEEYG 459
Query: 309 NLFDFISGKGLKIMNLGD-MKTTDGVAAVLQEDDDDAVDPHLERIKNEAG-GDESDEEDS 366
L+DF+ KG+ I N G ++TT+ + D++ D + E++K+EA +E++E DS
Sbjct: 460 KLYDFVVSKGINITNTGKRLETTENLFKG-SSDEEGERDHYAEQLKSEAREKEENNENDS 518
Query: 367 DFVADKD 373
D D D
Sbjct: 519 DESEDSD 525
>gi|66363410|ref|XP_628671.1| structure-specific recognition protein 1 (SSRP1) (recombination
signal sequence recognition protein) [Cryptosporidium
parvum Iowa II]
gi|46229663|gb|EAK90481.1| structure-specific recognition protein 1 (SSRP1) (recombination
signal sequence recognition protein) [Cryptosporidium
parvum Iowa II]
Length = 523
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 183/327 (55%), Gaps = 11/327 (3%)
Query: 3 TFMVGQ--KQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
T +G K V +++Q + K++++LEF+ + + D LMEI +PN
Sbjct: 123 TICIGNEGKVMMYVPSININQIAMPSKSELVLEFN-EGVNAGEDCDELMEIRLFVPNQEN 181
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGE-EAVVTFEGIAILTPRGRYSVELHLSFLRLQ 119
G+ + A+ R ++ + +G+ G + V + I +L PRGRY +E+ ++ L+L
Sbjct: 182 SLDGN-SLSSAEKLRSDLLKLTGIGSSGSMDKVCRWNDIHLLVPRGRYEIEVLVNCLKLH 240
Query: 120 GQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFET--DYVVQ 177
G++ D+ I + S+ RLFLLP+ +VV L+ P+R+G T YP +V+QF+T D ++
Sbjct: 241 GKSFDYTILFQSISRLFLLPRPGTSLVNLVVALETPMRQGNTKYPFVVMQFDTQQDENIE 300
Query: 178 SELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSS 237
L +SE+ + L P G ++ T IL+ L+G I PG FRSA + ++ S
Sbjct: 301 MPLNLSEK--EIQRFTGLSPIMTGKFWDIVTRILKSLTGHSIIVPGDFRSASMYHCIRCS 358
Query: 238 LKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEH 297
KA+DG+LYPL +SF F+ KP LI ++I +EF R GG+ +F+L I ++ ++
Sbjct: 359 YKAQDGLLYPLNRSFIFITKPVILIRFDDILNIEFSR--MGGNQTRFFELTITIRGGGDY 416
Query: 298 LFRNIQRNEYHNLFDFISGKGLKIMNL 324
F +I + EY+ L F+ K ++I NL
Sbjct: 417 SFTSIDKAEYNPLIKFLQEKNIRIKNL 443
>gi|67603802|ref|XP_666578.1| structure specific recognition protein [Cryptosporidium hominis
TU502]
gi|54657597|gb|EAL36346.1| structure specific recognition protein [Cryptosporidium hominis]
Length = 514
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 183/327 (55%), Gaps = 11/327 (3%)
Query: 3 TFMVGQ--KQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
T +G K V +++Q + K++++LEF+ + + D LMEI +PN
Sbjct: 114 TICIGNEGKVMMYVPSVNINQIAMPSKSELVLEFN-EGVNAGEDCDELMEIRLFVPNQEN 172
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGE-EAVVTFEGIAILTPRGRYSVELHLSFLRLQ 119
G+ + A+ R ++ + +G+ G + V + I +L PRGRY +E+ ++ L+L
Sbjct: 173 SLDGN-SLSSAEKLRSDLLKLTGIGSSGSMDKVCRWNDIHLLVPRGRYEIEVLVNCLKLH 231
Query: 120 GQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFET--DYVVQ 177
G++ D+ I + S+ RLFLLP+ +V+ L+ P+R+G T YP +V+QF+T D ++
Sbjct: 232 GKSFDYTILFQSISRLFLLPRPGTSLVNLVIALETPMRQGNTKYPFVVMQFDTQQDENIE 291
Query: 178 SELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSS 237
L +SE+ + L P G ++ T IL+ L+G I PG FRSA + ++ S
Sbjct: 292 MPLNLSEK--EIQRFTGLSPIMTGKFWDIVTRILKSLTGHSIIVPGDFRSASMYHCIRCS 349
Query: 238 LKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEH 297
KA+DG+LYPL +SF F+ KP LI ++I +EF R GG+ +F+L I ++ ++
Sbjct: 350 YKAQDGLLYPLNRSFIFITKPVILIRFDDILNIEFSR--MGGNQTRFFELTITIRGGGDY 407
Query: 298 LFRNIQRNEYHNLFDFISGKGLKIMNL 324
F +I + EY+ L F+ K ++I NL
Sbjct: 408 SFTSIDKAEYNPLIKFLQEKNIRIKNL 434
>gi|385305884|gb|EIF49827.1| dna polymerase delta binding protein [Dekkera bruxellensis
AWRI1499]
Length = 547
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 113/351 (32%), Positives = 181/351 (51%), Gaps = 32/351 (9%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFH-VDDTTGANEKDSLMEISFHIPN--- 57
L F V K AFE+ + ++ T + GKN+V +E VD + D L+E+ IP
Sbjct: 121 LVFNVSNKPAFEIPYSQIANTNMTGKNEVSVEMDLVDKSEIEKAGDELVELKLFIPGNME 180
Query: 58 ---------------------SNTQFVGDENHP---PAQVFRDKIMSMADVGAGGEEAVV 93
SNT D+ P A F D++ AD+G E +V
Sbjct: 181 KDEVEEINKKEEEEQSKTDNGSNT--TSDKIVPLRTKALYFYDELKEKADLGQVVGEMIV 238
Query: 94 TFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLD 153
+F + LTPRGRY ++++ SFLRL+G+ D+K+QY + R+F LPK + H +++ +D
Sbjct: 239 SFGEVLFLTPRGRYDIDMYDSFLRLRGKTYDYKVQYKQIQRIFSLPKVDGLHQLLILQVD 298
Query: 154 PPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRG 213
PP+R+GQT Y + LQF++ ++ EL + ++ K+K +L +Y + V T+I +G
Sbjct: 299 PPLRQGQTKYSFLTLQFDSQEEIEVELNLDDDEYEKKWKTRLNKTYSNYTYMVLTSIFKG 358
Query: 214 LSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFE 273
+ ++ PG F + A+ S+KA +G LYPL+K F+ KP L+ ++ V F
Sbjct: 359 FTDRRVVVPGSFLTKDSDVAISCSVKANEGHLYPLDKCLIFVTKPTILLPFSDVHEVVFS 418
Query: 274 RHAAGGSNMHYFDLLIRLKT-EQEHLFRNIQRNEYHNLFDFISGKGLKIMN 323
R G++ FD+ + LK H F NI R E L F+ + L++ N
Sbjct: 419 RVDTAGTH-KTFDMEVVLKYGGGSHTFGNIDRKEQSALETFLKTRNLRVRN 468
>gi|440794455|gb|ELR15616.1| hypothetical protein ACA1_164980, partial [Acanthamoeba castellanii
str. Neff]
Length = 463
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 118/335 (35%), Positives = 174/335 (51%), Gaps = 40/335 (11%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQ 61
+ F VG AFEV DV+Q LQ KN+V LEFH DDT+ + + +SL+E+ + P
Sbjct: 122 MMFQVGDGPAFEVPFTDVAQCVLQ-KNEVTLEFHQDDTSASVDSESLVELRLYFPPD--- 177
Query: 62 FVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQ 121
GD + A F ++ ADV + + TF I
Sbjct: 178 --GDMD---ADEFHKLVLDKADVVSTTGGGLATFPQIPTY-------------------- 212
Query: 122 ANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELL 181
D+KI YSS+ +F LPK + H +++LDPPIR+G T YPH+VLQF+ + ++
Sbjct: 213 --DYKIMYSSISHIFELPKPDDRHVCFMISLDPPIRQGGTRYPHLVLQFDKAAKIDLQVA 270
Query: 182 MSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAE 241
+ E + +LE G +++VF ++R L+ KIT PG + S AVK S+KA
Sbjct: 271 LKEMEGKLPKESRLEEEMSGKVYKVFRRVVRELTQKKITVPGTYLSHHQAPAVKCSVKAN 330
Query: 242 DGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAA-------GGSNMHYFDLLIRLKTE 294
DG LYP+++ F F+ KPPT I + +I VEF R ++ GGS FDL++ K
Sbjct: 331 DGYLYPMDRCFIFIHKPPTYIRYSDITVVEFARVSSEKQGDIQGGSRT--FDLVVYTKGG 388
Query: 295 QEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKT 329
+ F +QR E+ L +FI KG+KI + M+
Sbjct: 389 NDVQFTGMQRTEFKALVNFIQSKGIKIKRISHMEA 423
>gi|366999078|ref|XP_003684275.1| hypothetical protein TPHA_0B01680 [Tetrapisispora phaffii CBS 4417]
gi|357522571|emb|CCE61841.1| hypothetical protein TPHA_0B01680 [Tetrapisispora phaffii CBS 4417]
Length = 567
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 118/407 (28%), Positives = 202/407 (49%), Gaps = 46/407 (11%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNS--- 58
+ F + K FE+ + ++ T L KN+V +EF + D D L+E+ F+IP++
Sbjct: 123 MIFSLNGKPTFEIPYSRINNTNLTNKNEVAIEFDIQDEEYQPAGDELVEMRFYIPDAIKE 182
Query: 59 ----NTQF--------------VGDENH----------------PPAQVFRDKIMSMADV 84
N Q V EN A+ F +++ AD+
Sbjct: 183 EESENEQIKSESAEGAVKAEGAVKTENEEDVEMSENEREEFEEKSMAETFYEELKEKADI 242
Query: 85 GAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQP 144
G + +V+F I TPRGRY ++++ + +RL+G+ ++K+Q+ + ++ LPK +
Sbjct: 243 GETAGDVIVSFPDIFFTTPRGRYDIDIYKNSIRLRGKTYEYKLQHRQIQKIISLPKVDDI 302
Query: 145 HTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIH 204
H +V++++PP+R+GQT YP++VLQF+ D + +L + + +KD L+ Y H
Sbjct: 303 HHLIVLSIEPPLRQGQTSYPYVVLQFQKDEETEVQLNLDDADYEENFKDTLKKQYDAKTH 362
Query: 205 EVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILH 264
V + +L+GL+G ++ PG ++S D AV S KA +G LYPL+ +F FL KP I
Sbjct: 363 IVISHVLKGLTGRRVIVPGSYKSKYDNCAVSCSYKANEGYLYPLDNAFLFLTKPTLYIPF 422
Query: 265 EEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHL-FRNIQRNEYHNLFDFISGKGLKIMN 323
++ V R A + FDL I L+ + + F NI + E L F++ K LK+ N
Sbjct: 423 SDVSSVNISR-AGQSTTSRTFDLEIVLRFNRGSVTFGNISKEEQQLLELFLTSKSLKVRN 481
Query: 324 LGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDESDEEDSDFVA 370
+ ++ + L D DD I + G++ + D +F A
Sbjct: 482 -EEKESEQRLQTALGSDSDDG------DINMGSAGEDDESADEEFQA 521
>gi|401406796|ref|XP_003882847.1| putative structure specific recognition protein I [Neospora caninum
Liverpool]
gi|325117263|emb|CBZ52815.1| putative structure specific recognition protein I [Neospora caninum
Liverpool]
Length = 538
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 102/315 (32%), Positives = 175/315 (55%), Gaps = 11/315 (3%)
Query: 11 AFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFVGDEN-HP 69
AF++ +++Q KND+ +E DDT E D L+E+ F+ P F GD++
Sbjct: 148 AFDIHAQEIAQVTTPSKNDLAIELIQDDTRDQQE-DQLLEVRFYQP-----FAGDDDAEG 201
Query: 70 PAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQY 129
P Q + K++ + V ++V + +L PRGRY +++ L+ G++ D+ IQY
Sbjct: 202 PLQQLKQKLVKKSGVAETKMDSVALLNDVPLLVPRGRYEIDIGRRALKFHGKSYDYTIQY 261
Query: 130 SSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNT 189
+S+ R+FL+P+ N PH +++L+ +R+GQT YP +V+QF+++ V E+ + L
Sbjct: 262 TSINRMFLVPRPNSPHVNFILSLENAMRQGQTSYPFVVMQFDSESVHSVEVNLEAAELQQ 321
Query: 190 KYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLE 249
+ +KL +G V T + R L G + PG F+S + + + S +A+ G LYPL
Sbjct: 322 RGLEKL---IEGKTFHVVTRLFRALVGKSVIVPGDFKSVKQQFGIACSYRAQSGHLYPLN 378
Query: 250 KSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHN 309
+SF F+ KP + ++++ VEF R A +N +F + ++ E F +I RNEY
Sbjct: 379 RSFLFIVKPVIFVRYDDVVSVEFSRTGASTTN-RFFAFTVSVRGGGEFEFTSIDRNEYKP 437
Query: 310 LFDFISGKGLKIMNL 324
L DF+ KG++I N+
Sbjct: 438 LVDFLVEKGIRIKNM 452
>gi|156051618|ref|XP_001591770.1| hypothetical protein SS1G_07216 [Sclerotinia sclerotiorum 1980]
gi|154704994|gb|EDO04733.1| hypothetical protein SS1G_07216 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 302
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 115/296 (38%), Positives = 165/296 (55%), Gaps = 12/296 (4%)
Query: 116 LRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYV 175
RL+G+ D+KIQY + + +LPK ++ H + + LDPP+R+GQT YP +V+QF+ D
Sbjct: 6 FRLRGKTYDYKIQYDHIKKFMVLPKPDELHFMICIGLDPPLRQGQTRYPFLVMQFKKDEE 65
Query: 176 VQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGK-FRSAQDGYAV 234
V +L M EE++ KY KL Y+ +HEV T + RGL+G KI +P K F S Y +
Sbjct: 66 VTIDLNMMEEVMEEKYGGKLVQHYEQPLHEVVTQVFRGLAGKKINQPAKDFLSHHSQYGI 125
Query: 235 KSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKT- 293
K S+KA +G LY LEK+F F+PKP T I +E+I + F R S FD+ + LK
Sbjct: 126 KCSIKASEGFLYCLEKAFMFVPKPATYITYEQISVITFSRVGGATSASRTFDIAVGLKNG 185
Query: 294 EQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAV----LQEDDDDAVDPHL 349
E F NI R E NL DF KGL++ N D T +A + +Q D++ V
Sbjct: 186 AGETQFSNINREEQKNLEDFFKIKGLRVKNEMDEDNTAHIALLDNPDMQSSDEEVVAARA 245
Query: 350 ERIKNEAGGDESDEEDSDFVADKDDGGSPTDDSGEEDS--DASESGG-EKEKPAKK 402
+R + ++ + D DF D + + DS E S D+ E GG + E+PAKK
Sbjct: 246 DR---GSADEDDESVDEDFKTDTESDVAEEYDSAHESSGTDSEEEGGSDAERPAKK 298
>gi|403362281|gb|EJY80865.1| DNA polymerase delta binding protein [Oxytricha trifallax]
Length = 515
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 142/478 (29%), Positives = 228/478 (47%), Gaps = 59/478 (12%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQ 61
++F V + F V+ D++ + GKN+V EF VD + D L E+ F++PNS
Sbjct: 23 MSFTVNGQPCFIVNYKDIALSTATGKNEVTFEFQVDSENKNDRADILTEMRFYVPNSELD 82
Query: 62 FVGDENH------------------------------------PPAQVFRDKIMSMADVG 85
+ +E PAQ+F +KI+ A +G
Sbjct: 83 SLEEEKKKEETGKEEEEKKEKKEDGAADEEEDDEEEEEEEISITPAQIFNEKIIKAAGIG 142
Query: 86 AGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPH 145
E + + + +L PRG+YS +L+ SF +L G+ ND+KIQY + + FLLPK + H
Sbjct: 143 EFAGEMIASLSELPMLIPRGKYSFQLYSSFAKLHGRTNDYKIQYKDITKGFLLPKPDGIH 202
Query: 146 TFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHE 205
V+ L P+R+GQTL+ +I+LQFE + V+ + +S E + +Y D+L +G +++
Sbjct: 203 MAYVLHLKVPLRQGQTLHHYILLQFEREKTVKVHINLSPEQIKDQYGDRLTSELEGPLYD 262
Query: 206 VFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHE 265
V + + R L I P +F+S++ A+K S+KA DG LYPL+ S F+ KP + H
Sbjct: 263 VISKLFRELIKINILIPSEFKSSKKDDAIKCSVKASDGYLYPLKSSIIFIHKPVIYLKHT 322
Query: 266 EIDYVEFER--HAAGGSNMHYFDLLI-RLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIM 322
EI +VEF R + G FD+ I LK F I + E+ NL +++ K +K+
Sbjct: 323 EIKFVEFRRVGQISSGIPSRSFDMTITSLKDNLATTFAGIDKAEHKNLVNYLKSKNIKMR 382
Query: 323 NLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE------------SDEEDSDFVA 370
++ D++T V + DDD+ E K AGG D +D +
Sbjct: 383 SV-DVETNQQV-----DFDDDSEMEEEEEEKGAAGGKRVRKPVGKTQLPEEDYDDEEDDE 436
Query: 371 DKDDGGSPTDDSGEEDSDASESGGEK--EKPAKKESKKESSSVKASTSKKKSRDGDED 426
+D GSP + +E+ D + E E K+ + K+K R G +D
Sbjct: 437 SFNDEGSPKESDEDEEMDEDDDSDVSMVEDDLDDEVKQLQKEAPKLSGKRKGRGGAKD 494
>gi|392579935|gb|EIW73062.1| hypothetical protein TREMEDRAFT_14396, partial [Tremella
mesenterica DSM 1558]
Length = 420
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/343 (33%), Positives = 189/343 (55%), Gaps = 25/343 (7%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEF----HVDDTTGANEK--DSLMEISFHI 55
+ F V K AFE+ L+ V+ + + GKN+V LEF D + K D ++EI F++
Sbjct: 74 IEFSVQNKTAFEIPLSAVANSNVAGKNEVSLEFAPPAFKKDPKNLSLKPMDEMVEIRFYV 133
Query: 56 PNSNTQFVG------DENH----------PPAQVFRDKIMSMADVGAGGEEAVVTFEGIA 99
P + + G DE+ AQ I AD+G +++V+F +
Sbjct: 134 PGKSVKPRGSDAGSDDESEVELDEDGNEITAAQALHSAIAEKADIGEVVGDSIVSFSDVL 193
Query: 100 ILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKG 159
ILTPRGRY+++ + +RL G++ D+++ ++SV RLFLLPK + H +V+ LDPPIR+G
Sbjct: 194 ILTPRGRYTLDFYPDSVRLLGKSTDYRVPFTSVRRLFLLPKLDDLHVQLVIGLDPPIRQG 253
Query: 160 QTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKI 219
T YP +VLQ+ D V +EL M++E L Y D L+ Y V + +++ +G ++
Sbjct: 254 ATRYPFLVLQWPKDEEVDAELAMTDEEL-ANYPD-LKKKYDAPSFTVISQVIKSFTGKRV 311
Query: 220 TKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGG 279
T PG FR+AQ +K+++KA G LY L+K F+ K P LI + + + F R G
Sbjct: 312 TPPGSFRNAQGLNGIKANVKAVQGELYFLDKGLIFIAKQPILIDFSKTETISFSRVGGGI 371
Query: 280 SNMHYFDLLIRLKTE-QEHLFRNIQRNEYHNLFDFISGKGLKI 321
++ FD+ + + E + +F +I + E ++ F+ KG+++
Sbjct: 372 ASARTFDMRVVSRAEGTDIIFSSINKEESAHITAFLKEKGVRV 414
>gi|389744857|gb|EIM86039.1| SSrecog-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 645
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 142/430 (33%), Positives = 219/430 (50%), Gaps = 38/430 (8%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEK-------DSLMEISFH 54
L F+V K AFE+ L V+ + + G+ +V LEF ++ K D ++EI F
Sbjct: 115 LAFLVSNKTAFELQLQHVANSNIAGRTEVSLEFASSAGEASSSKKPSKSAPDEMVEIRFF 174
Query: 55 IP--NSNTQFVGD--------------ENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGI 98
+P S Q G E AQVF D I A E +++FE +
Sbjct: 175 VPGTTSTRQRTGSDAGSQKSDAEDEDGEEVSAAQVFHDAIKEKAGSELATGEKILSFEEV 234
Query: 99 AILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRK 158
+LTPRGRY V++ FLRL+G+ D+KI Y+S+ +LFLLPK + H +++L PIR+
Sbjct: 235 LVLTPRGRYDVDMFPDFLRLRGKTYDYKIVYTSISKLFLLPKDD-LHVLFILSLLTPIRQ 293
Query: 159 GQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAK 218
GQT Y ++V+QF + + +EL M++E D+L+ Y+ EV +++ R LSG K
Sbjct: 294 GQTRYQYLVMQFSREEEITAELNMTDE--EIAKHDRLKKDYEDPTFEVVSSVFRALSGKK 351
Query: 219 ITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFER---H 275
IT G F+S +K++LKA G L+ LEKS FF+ K P L+ ++ F R
Sbjct: 352 ITSTGSFQSRTGHPGIKANLKAVQGDLFLLEKSIFFVSKQPVLVELSDVHQAVFSRVGGA 411
Query: 276 AAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAA 335
G S FDL I K+ E+ F ++ + E+ + F+ K +++ N M D + A
Sbjct: 412 GLGASAARTFDLKIVTKSGPEYTFTSLNKEEHEPVDAFLKEKKVRVKNEM-MPDGDLLMA 470
Query: 336 VLQEDDDDAVDPHL--ER----IKNEAGGDESDEEDSDFVADKDDGGSPTDDSGEED--S 387
+D D+ + ER ++ D E+D DF A D GSPTD + D
Sbjct: 471 GADDDSDEEMQSVASDEREQPNVRRTGDDDSDSEDDEDFEASSTDAGSPTDTDSDSDGGG 530
Query: 388 DASESGGEKE 397
AS++ G+++
Sbjct: 531 TASDASGDRQ 540
>gi|299743222|ref|XP_001835614.2| chromatin binding protein [Coprinopsis cinerea okayama7#130]
gi|298405558|gb|EAU86185.2| chromatin binding protein [Coprinopsis cinerea okayama7#130]
Length = 643
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 120/343 (34%), Positives = 188/343 (54%), Gaps = 34/343 (9%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTT----GANEKDSLMEISFHIPN 57
L F+V K AFE+ L V+ + + G+ +V LEF + G D ++EI FH+P
Sbjct: 115 LAFLVQDKTAFELPLNQVANSNIAGRTEVSLEFASIAGSSKGPGKQAGDEMVEIRFHVPG 174
Query: 58 SNTQFVG--------------DENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTP 103
+ + G +E AQ F + I A++G +++FE + +LTP
Sbjct: 175 AVPKVKGSDAGSQDGEQDNEDEEEISAAQAFHETIKERANIGQITGNMILSFEEVLVLTP 234
Query: 104 RGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLY 163
RGRY +++ FLRL+G+ D+KI ++S+ RLFLLPK +Q F+ GQT Y
Sbjct: 235 RGRYDMDMFRDFLRLRGKTYDYKIVFTSISRLFLLPKDDQHVLFI----------GQTRY 284
Query: 164 PHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPG 223
++V+QF + + +EL +S+E L KY DKL+ +Y+ +EV +++ R LSG KI G
Sbjct: 285 QYLVMQFTREEEITAELNISDEDL-AKY-DKLKKNYEDPTYEVISSVFRALSGKKIIGAG 342
Query: 224 KFRSAQDGY-AVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAA--GGS 280
F+S +DG+ +K++LKA G L+ LEK FF+ K PTLI +I V F R A G +
Sbjct: 343 SFQS-RDGHPGIKANLKAIQGDLFMLEKYIFFVSKAPTLIEISDIHQVVFSRVGASMGAA 401
Query: 281 NMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMN 323
FDL I K+ E+ F +I + E+ ++ K +++ N
Sbjct: 402 AARTFDLKIITKSGPEYNFTSINKEEHEVTEAYLKDKKVRVKN 444
>gi|326437876|gb|EGD83446.1| hypothetical protein PTSG_04053 [Salpingoeca sp. ATCC 50818]
Length = 797
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 155/564 (27%), Positives = 247/564 (43%), Gaps = 85/564 (15%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
L F V K AFEV L V Q K + ++F D+ NE+ IP+ +
Sbjct: 120 FLVFDVDGKPAFEVPLNAVGNVTSQ-KYEASIDFIQDEDADDNEQRVESMRFLVIPDPES 178
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
E + + F + + + A + A+ T ++ L PRGR+ VEL+ SF++L+G
Sbjct: 179 -----EQYAKTEEFVENVKARASIAEYTSRAICTIGKLSFLVPRGRFDVELYPSFMQLRG 233
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDY------ 174
D ++ Y + ++LLP+ + ++V+ +DPP+R GQT YPH++LQF ++
Sbjct: 234 STYDHRLFYDYISHIYLLPRPDDGE-YIVLAVDPPLRHGQTRYPHVLLQFTREHEGADVV 292
Query: 175 --VVQSELLMSEELLNTKY-KDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDG 231
V E+ S L D+ E + G + + + +L+ L+ KI PG F S++
Sbjct: 293 VNVTSDEVRSSLSYLTESIPADQAEVTETGPLASILSRLLKALTKRKIITPGSFTSSEGF 352
Query: 232 YAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDY---VEFERHAAGGS-NMHYFDL 287
AV + KA G LYPL++ F FL KP +LH I V F+R S + FD+
Sbjct: 353 AAVNCTYKANRGTLYPLDRGFLFLHKP---LLHISIVRNLRVTFDRVKESSSRDTKSFDM 409
Query: 288 LIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDP 347
+ E FR + ++E L DF+ K + I L + G DDD D
Sbjct: 410 RLLHPERGEFEFRGLGQDELQPLIDFLRLKRVAIEGLDEAPAAAG--------DDDGFD- 460
Query: 348 HLERIKNEAGGDESDEEDSDFVA---DKDDGGSPTDDSGEEDSDASESGGEKEK------ 398
ED D V D DDG S +D S ED D ES + E+
Sbjct: 461 --------------SSEDEDHVVRPGDFDDGSSESDHSFAED-DVEESSMDSEEDEQLQD 505
Query: 399 -----------PAKKESKKESSSVKASTSKKKS------------------RDGDEDGKK 429
PAKK+ +S K ++ D KK
Sbjct: 506 ELVEDDMLGQAPAKKKRASKSRQSKQRDDDEEDDDDDEDEDEDEDEDDIIVEDKPVKSKK 565
Query: 430 KKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREP 489
K QK PK+A + + +S R +K+ +P ++F ++ + LG+ W+ ++ E++
Sbjct: 566 KTQKASAAKRGPKKAKTAYALWSSSARSKLKEQHPDLSFGELSKKLGQAWQDLADEDKAE 625
Query: 490 YESKARADKKRYKDEISGYKNPKP 513
+ KA+ D++RY E + P
Sbjct: 626 WNEKAKEDRQRYLKEKKKFDAENP 649
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 45/73 (61%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPK A S +I+FS RE IK+ P + + + G W+ +S EE++ YE A
Sbjct: 663 DPNAPKGAKSAYIYFSTEMREKIKEEKPDLTLGQISQECGTLWRGLSDEEKKKYEKMAAE 722
Query: 497 DKKRYKDEISGYK 509
DKKRY+ E++ YK
Sbjct: 723 DKKRYEAEMAEYK 735
>gi|156100499|ref|XP_001615977.1| structure specific recognition protein [Plasmodium vivax Sal-1]
gi|148804851|gb|EDL46250.1| structure specific recognition protein, putative [Plasmodium vivax]
Length = 504
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 178/331 (53%), Gaps = 16/331 (4%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQ 61
+TF + K AF + +SQ +Q K D+ +E ++ NE D L EI F P+ N
Sbjct: 130 ITFDIDNKYAFTIPTNSISQLNVQIKTDIAMELKNEENKKTNE-DFLSEIRFCYPHEN-- 186
Query: 62 FVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQ 121
DEN Q F++ ++ ++G E + + I +L PRGRY +E++ +L G+
Sbjct: 187 ---DENQN-FQNFKNDLLEKVNIGDSKSECIASLANIPLLVPRGRYEIEMYTKSFKLHGK 242
Query: 122 ANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELL 181
+ DF IQY+++ ++ L+PKSN ++ +L+ +++GQT YP I++Q D ++ ++
Sbjct: 243 SYDFTIQYTNINKMLLVPKSNSNQYVLIFSLNNKMKQGQTEYPFILIQLNNDDDMELDIN 302
Query: 182 MSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAE 241
SEE L K KLE S G ++V T + L PG +R+A++ + + S +A
Sbjct: 303 ASEEDLK---KYKLEKSLSGKAYDVVTRLFTALVKKNAIIPGDYRTAKNEHGITCSYRAA 359
Query: 242 DGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMH-YFDLLIRLKTEQEHLFR 300
G LYPL K F F+ KP LI ++I + F+R G N H +F L+I+ K + +
Sbjct: 360 SGQLYPLNKYFLFIIKPVILISFDDIVTLSFQR--TGNINQHRFFSLIIKHKRGMSYEYT 417
Query: 301 NIQRNEYHNLFDFISGKGLKIM---NLGDMK 328
NI ++EY L +F+ K + I N+ D K
Sbjct: 418 NIDKSEYLPLLEFLKSKNIHIQDDANVADKK 448
>gi|62321053|dbj|BAD94127.1| recombination signal sequence recognition protein [Arabidopsis
thaliana]
Length = 208
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 133/207 (64%), Positives = 166/207 (80%), Gaps = 4/207 (1%)
Query: 322 MNLGDMKTTDGVAAVL-QEDDDDAVDPHLERIKNEAGGDESDEEDSDFVADKDDGGSPTD 380
MNLG T DGVAAVL DDDDAVDPHL RI+N+A + +E++ + + DDGGSPTD
Sbjct: 1 MNLGGAGTADGVAAVLGDNDDDDAVDPHLTRIRNQAADESDEEDEDFVMGEDDDGGSPTD 60
Query: 381 DSGEEDSDASESG-GE-KEKPAKKESKKESSSVKASTSKKKSRDGDE-DGKKKKQKKKKD 437
DSG +DSDASE G GE KEK KKE KKE+SS K K+K+ DE K+KK KKKKD
Sbjct: 61 DSGGDDSDASEGGVGEIKEKSIKKEPKKEASSSKGLPPKRKTVAADEGSSKRKKPKKKKD 120
Query: 438 PNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARAD 497
PNAPKRAMSGF+FFSQMER+NIKK +PGIAF +VG+VLG++W++MS +++EPYE+KA+ D
Sbjct: 121 PNAPKRAMSGFMFFSQMERDNIKKEHPGIAFGEVGKVLGDKWRQMSADDKEPYEAKAQVD 180
Query: 498 KKRYKDEISGYKNPKPMDIDSGNESDS 524
K+RYKDEIS YKNP+PM++DSGN+S+S
Sbjct: 181 KQRYKDEISDYKNPQPMNVDSGNDSNS 207
>gi|296811248|ref|XP_002845962.1| FACT complex subunit pob3 [Arthroderma otae CBS 113480]
gi|238843350|gb|EEQ33012.1| FACT complex subunit pob3 [Arthroderma otae CBS 113480]
Length = 568
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 132/446 (29%), Positives = 198/446 (44%), Gaps = 95/446 (21%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHV--DDTTGANE--------------- 44
L+F V + AFEV +++S T L G+N+V +EF + DD E
Sbjct: 168 LSFNVQNRPAFEVPYSEISNTNLAGRNEVAVEFFLPTDDAASVKEQPAGSTKNRGRKAGL 227
Query: 45 -KDSLMEISFHIPNSNTQFVGD---------------ENHPPAQVFRDKIMSMADVGAGG 88
+D L+E+ F+IP + ++ E A +F + +M A++G
Sbjct: 228 GRDELVEMRFYIPGTVSKKEEGEEGEDNKSADDEEEVEEQNAANLFYETLMDKAEIGDVA 287
Query: 89 EEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFV 148
+ TF + LTPRGR+ ++++ S RL+G+ D+KIQY S+ + FLLPK++ HT +
Sbjct: 288 GDTFATFLDVLHLTPRGRFDMDMYESSFRLRGKTYDYKIQYQSIKKFFLLPKNDDTHTLI 347
Query: 149 VVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFT 208
+ LDPP+R+GQT YP +V+Q + D + +L M++
Sbjct: 348 TLGLDPPLRQGQTRYPFLVMQLKLDDEISIDLNMTD------------------------ 383
Query: 209 TILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEID 268
VK S KA +G+L+ L+KSF F+PKP T I E I
Sbjct: 384 ------------------------GVKCSTKANEGLLFCLDKSFMFVPKPATYIQIENIS 419
Query: 269 YVEFERHAAGGSNMHYFDLLIRLKTEQ-EHLFRNIQRNEYHNLFDFISGKGLKIMNLGDM 327
+ R S FD+ + LK Q EH F NI R E L DF K ++ N
Sbjct: 420 VITMSRVGGTVSASRTFDITMTLKGGQGEHQFSNINREEQQPLEDFFKAKNIRFKNEMVE 479
Query: 328 KTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDESDEE--DSDFVADKD---------DGG 376
+ + +A L+ D ++ + G D E D DFV D D +
Sbjct: 480 EASTLIATALENDQMMDSSDDDADVQEDRGSAAEDSESPDEDFVGDSDSEVAEEFDSEHA 539
Query: 377 SPTDDSGEEDSDASESGGEKEKPAKK 402
S + DS EE DA E E+P KK
Sbjct: 540 SSSGDSDEEMDDADND--EDERPKKK 563
>gi|68076909|ref|XP_680374.1| structure specific recognition protein [Plasmodium berghei strain
ANKA]
gi|56501298|emb|CAI04722.1| structure specific recognition protein, putative [Plasmodium
berghei]
Length = 493
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 174/321 (54%), Gaps = 12/321 (3%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQ 61
L F + +K AF ++ +++Q +Q K D+ +E D+ +D L EI F+ P+ N
Sbjct: 132 LIFDIDKKYAFNINTNNINQLNVQIKTDIAIELKNDENKQNTNEDVLSEIRFYYPHEN-- 189
Query: 62 FVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQ 121
DEN Q ++ ++ ++G E + + I +L PRGRY +E++ +L G+
Sbjct: 190 ---DENQ-NFQDLKNNLLEKVNIGDSKSECIASLSNIPLLVPRGRYEIEMYSKTFKLHGK 245
Query: 122 ANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELL 181
+ DF +QYS++ ++ L+PK+N ++ +L+ I++GQT YP I++Q D + ++
Sbjct: 246 SYDFTVQYSNINKMLLVPKTNSNQYILIFSLNNKIKQGQTEYPFILIQLSNDDDMDLDIN 305
Query: 182 MSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAE 241
SEE + KLE + G ++V T + L+ PG +R+A++ + + S +A
Sbjct: 306 ASEEDIQNY---KLEKTLTGKAYDVVTRLFTALAKKNAIIPGDYRTAKNEHGITCSYRAA 362
Query: 242 DGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMH-YFDLLIRLKTEQEHLFR 300
G LYPL K F F+ KP LI ++I + F+R G N H +F L+I+ K + +
Sbjct: 363 SGQLYPLNKYFLFVVKPVILISFDDIVTLSFQR--TGNINQHRFFSLIIKHKRGISYEYT 420
Query: 301 NIQRNEYHNLFDFISGKGLKI 321
NI ++EY L +F+ K L I
Sbjct: 421 NIDKSEYAPLLEFLKSKNLNI 441
>gi|82704506|ref|XP_726583.1| structure specific recognition protein [Plasmodium yoelii yoelii
17XNL]
gi|23482051|gb|EAA18148.1| putative structure specific recognition protein [Plasmodium yoelii
yoelii]
Length = 493
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 174/321 (54%), Gaps = 12/321 (3%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQ 61
L F + +K AF ++ +++Q +Q K D+ +E D+ +D L EI F+ P+ N
Sbjct: 132 LFFDIDKKYAFNINTNNINQLNVQIKTDIAIELKNDENKQNTNEDVLSEIRFYYPHEN-- 189
Query: 62 FVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQ 121
DEN Q ++ ++ ++G E + + I +L PRGRY +E++ +L G+
Sbjct: 190 ---DENQN-FQDLKNNLLEKVNIGDSKSECIASLSNIPLLVPRGRYEIEMYSKTFKLHGK 245
Query: 122 ANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELL 181
+ DF +QYS++ ++ L+PK+N ++ +L+ I++GQT YP I++Q D + ++
Sbjct: 246 SYDFTVQYSNINKMLLVPKTNSNQYILIFSLNNKIKQGQTEYPFILIQLSNDDDMDLDIN 305
Query: 182 MSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAE 241
SEE + KLE + G ++V T + L+ PG +R+A++ + + S +A
Sbjct: 306 ASEEDIQNY---KLEKTLTGKAYDVVTRLFTALAKKNAIIPGDYRTAKNEHGITCSYRAA 362
Query: 242 DGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMH-YFDLLIRLKTEQEHLFR 300
G LYPL K F F+ KP LI ++I + F+R G N H +F L+I+ K + +
Sbjct: 363 SGQLYPLNKYFLFVVKPVILISFDDIVTLSFQR--TGNINQHRFFSLIIKHKRGISYEYT 420
Query: 301 NIQRNEYHNLFDFISGKGLKI 321
NI ++EY L +F+ K L I
Sbjct: 421 NIDKSEYAPLLEFLKSKNLNI 441
>gi|109157818|pdb|2GCJ|A Chain A, Crystal Structure Of The Pob3 Middle Domain
gi|109157819|pdb|2GCJ|B Chain B, Crystal Structure Of The Pob3 Middle Domain
gi|109157820|pdb|2GCJ|C Chain C, Crystal Structure Of The Pob3 Middle Domain
gi|109157821|pdb|2GCJ|D Chain D, Crystal Structure Of The Pob3 Middle Domain
Length = 261
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 150/254 (59%), Gaps = 1/254 (0%)
Query: 71 AQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYS 130
A+ F +++ AD+G +A+V+F+ + TPRGRY ++++ + +RL+G+ ++K+Q+
Sbjct: 4 AEAFYEELKEKADIGEVAGDAIVSFQDVFFTTPRGRYDIDIYKNSIRLRGKTYEYKLQHR 63
Query: 131 SVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTK 190
+ R+ LPK++ H +V+ ++PP+RKGQT YP +VLQF+ D + +L + +E
Sbjct: 64 QIQRIVSLPKADDIHHLLVLAIEPPLRKGQTTYPFLVLQFQKDEETEVQLNLEDEDYEEN 123
Query: 191 YKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEK 250
YKDKL+ Y H V + +L+GL+ ++ PG+++S D AV S KA +G LYPL+
Sbjct: 124 YKDKLKKQYDAKTHIVLSHVLKGLTDRRVIVPGEYKSKYDQCAVSCSFKANEGYLYPLDN 183
Query: 251 SFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQ-EHLFRNIQRNEYHN 309
+FFFL KP I ++ V R ++ FDL + L++ + F NI + E
Sbjct: 184 AFFFLTKPTLYIPFSDVSMVNISRAGQTSTSSRTFDLEVVLRSNRGSTTFANISKEEQQL 243
Query: 310 LFDFISGKGLKIMN 323
L F+ K L++ N
Sbjct: 244 LEQFLKSKNLRVKN 257
>gi|346971388|gb|EGY14840.1| FACT complex subunit pob-3 [Verticillium dahliae VdLs.17]
Length = 334
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/298 (34%), Positives = 168/298 (56%), Gaps = 9/298 (3%)
Query: 101 LTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQ 160
+ RGR+ ++++ + RL+G+ D+KIQY ++ + +LPK + H + V LDPP+R+GQ
Sbjct: 5 IANRGRFDIDMYDTSFRLRGKTYDYKIQYEAIKKFMVLPKPDDAHVMLCVGLDPPLRQGQ 64
Query: 161 TLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKIT 220
T YP +V+QF+ D V ++ ++EE + KY DKL+ Y+ +H+V T I RGL+ K+T
Sbjct: 65 TRYPFVVMQFKKDEEVTLDVNLTEEQIKDKYGDKLQSHYEQPLHQVITYIFRGLANKKVT 124
Query: 221 KPGK-FRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGG 279
P K F++ ++ +K S+KA +G LY LEK+F F+PKP T I +E+ + F R
Sbjct: 125 TPAKDFQTHRNQLGIKCSIKASEGFLYCLEKAFMFIPKPATYIAYEQTASITFSRVGGAV 184
Query: 280 SNMHYFDLLIRLKT-EQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQ 338
S + FD+ + +K F NI R + L F K L++ N D AA+ +
Sbjct: 185 SALSTFDITVLMKNGAGSTQFSNISREDLKGLETFFKLKNLRVKNEIDEDANLLKAALRE 244
Query: 339 EDDDDAVDPHLERIKNEA----GGDESDEEDSDFVADKDDGGSPTDDSGEEDSDASES 392
E DD+ D E + N+A ++ + D DF AD + + DS E SD+ ++
Sbjct: 245 EAMDDSED---EVVGNKADRGSADEDEESVDEDFRADSESDVAEEYDSNPETSDSEDA 299
>gi|221059627|ref|XP_002260459.1| structure specific recognition protein [Plasmodium knowlesi strain
H]
gi|193810532|emb|CAQ41726.1| structure specific recognition protein,putative [Plasmodium
knowlesi strain H]
Length = 505
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 177/335 (52%), Gaps = 16/335 (4%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQ 61
+ F + K AF + ++Q +Q K D+ +E +D NE D L EI F P+ N
Sbjct: 130 INFDIDNKYAFSIPTNSINQLNVQIKTDIAMELKNEDYKKTNE-DFLSEIRFCYPHEN-- 186
Query: 62 FVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQ 121
DEN Q F++ ++ ++G E + + I +L PRGRY +E++ +L G+
Sbjct: 187 ---DEN-KHFQNFKNDLLEKVNIGDSKSECIASLANIPLLVPRGRYEIEMYPKSFKLHGK 242
Query: 122 ANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELL 181
+ DF +QY+++ ++ L+PKSN ++ +L+ +++GQT YP I++Q D ++ ++
Sbjct: 243 SYDFTVQYTNINKMLLVPKSNSNQYVLIFSLNNKMKQGQTEYPFILVQLNNDDDMELDIN 302
Query: 182 MSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAE 241
SEE L K KLE S G +EV + L PG FR+A++ + + S +A
Sbjct: 303 ASEEDLK---KYKLEKSLCGRAYEVIPRLFSALVKKNAIIPGDFRTAKNEHGITCSYRAA 359
Query: 242 DGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMH-YFDLLIRLKTEQEHLFR 300
G LYPL K F F+ KP LI ++I + F+R G N H +F ++I+ K + +
Sbjct: 360 SGQLYPLNKYFLFIVKPVILISFDDIVTLTFQR--TGNINQHRFFSVIIKHKRGMSYEYT 417
Query: 301 NIQRNEYHNLFDFISGKGLKIM---NLGDMKTTDG 332
NI ++EY L +F+ K + I N+ D K G
Sbjct: 418 NIDKSEYLPLLEFLKSKNIHIQDDANVADKKQDFG 452
>gi|109157822|pdb|2GCL|A Chain A, Structure Of The Pob3 Middle Domain
gi|109157823|pdb|2GCL|B Chain B, Structure Of The Pob3 Middle Domain
Length = 261
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 148/254 (58%), Gaps = 1/254 (0%)
Query: 71 AQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYS 130
A+ F +++ AD+G +A+V+F+ + TPRGRY ++++ + +RL+G+ ++K+Q+
Sbjct: 4 AEAFYEELKEKADIGEVAGDAIVSFQDVFFTTPRGRYDIDIYKNSIRLRGKTYEYKLQHR 63
Query: 131 SVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTK 190
+ R+ LPK++ H V ++PP+R+GQT YP +VLQF+ D + +L + +E
Sbjct: 64 QIQRIVSLPKADDIHHXXVXAIEPPLRQGQTTYPFLVLQFQKDEETEVQLNLEDEDYEEN 123
Query: 191 YKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEK 250
YKDKL+ Y H V + +L+GL+ ++ PG+++S D AV S KA +G LYPL+
Sbjct: 124 YKDKLKKQYDAKTHIVLSHVLKGLTDRRVIVPGEYKSKYDQCAVSCSFKANEGYLYPLDN 183
Query: 251 SFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQ-EHLFRNIQRNEYHN 309
+FFFL KP I ++ V R ++ FDL + L++ + F NI + E
Sbjct: 184 AFFFLTKPTLYIPFSDVSXVNISRAGQTSTSSRTFDLEVVLRSNRGSTTFANISKEEQQL 243
Query: 310 LFDFISGKGLKIMN 323
L F+ K L++ N
Sbjct: 244 LEQFLKSKNLRVKN 257
>gi|403337451|gb|EJY67941.1| DNA polymerase delta binding protein [Oxytricha trifallax]
Length = 561
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 111/369 (30%), Positives = 181/369 (49%), Gaps = 43/369 (11%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEK---------DSLMEIS 52
+ F ++A + DV+ + + G+N+V LE A EK D + EI
Sbjct: 36 IGFKTNNQRALVIDYKDVALSSVSGRNEVTLELQDHKKKEAAEKNQKKPDNNYDCVSEIR 95
Query: 53 FHIPNSN-------------------TQFVGD--------ENHPPAQVFRDKIMSMADVG 85
F +PNS+ T GD E PAQ+ +KI++ A +
Sbjct: 96 FFVPNSDLMANRAKEDAKKSKPKQKKTDDKGDGSEEEDDQEEFTPAQIMNEKIINAAGLS 155
Query: 86 AGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPH 145
+ + + I + PRG+YS + SFL+L G ND+KI+Y +++ FLLPK +
Sbjct: 156 DYAGDVIASLPEITMNIPRGKYSFNFYKSFLKLHGSTNDYKIKYKDIIKGFLLPKPDGIQ 215
Query: 146 TFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHE 205
+V L P+R GQTL+ + +QF+ EL M E L +Y DKL+P +G +++
Sbjct: 216 MAYIVQLSSPLRLGQTLHYFLAIQFDRHKEATVELNMEPEKLKEEYGDKLDPILEGPLYD 275
Query: 206 VFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHE 265
V + + + + I P FR+ ++ A++ S+KA +G LYPL+ S F+ KP I
Sbjct: 276 VLSKLFKEIIKKNILIPHDFRTTKEEEALRCSVKASEGHLYPLKSSLIFIHKPVHYIKFN 335
Query: 266 EIDYVEFERHAAGGSNM---HYFDLLI-RLKTEQEHLFRNIQRNEYHNLFDFISGKGLKI 321
EI Y+EF R G S M FD+ I R + + + F I + E L ++ KG+++
Sbjct: 336 EIKYIEFSR--VGNSGMGSSKSFDITITRSRDDSQITFAGIDKTEQKKLSAYLKDKGIRV 393
Query: 322 MNLGDMKTT 330
++ D++T
Sbjct: 394 RSV-DLETN 401
>gi|295663761|ref|XP_002792433.1| FACT complex subunit pob3 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226279103|gb|EEH34669.1| FACT complex subunit pob3 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 571
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/376 (30%), Positives = 176/376 (46%), Gaps = 79/376 (21%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFH-----VDDTTGANE------------ 44
LTF V + AFE+ +++S T L GKN+V +EF V+ T G +E
Sbjct: 158 LTFNVQNRPAFELPYSEISNTNLAGKNEVAVEFALPVDGVNGTNGQSEGSTKSRGRKAGA 217
Query: 45 -KDSLMEISFHIPNSNTQFVGD-----------------ENHPPAQVFRDKIMSMADVGA 86
+D L+E+ F+IP + + E A +F + +M A++G
Sbjct: 218 GRDELVEMRFYIPGTALKKEKPEGEEGEGDEKSVHGEEAEEQNAANLFYETLMDKAEIGD 277
Query: 87 GGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHT 146
+ TF + LTPRGR+ ++++ S RL+G+ D+KIQY S+ + FLLPK++ HT
Sbjct: 278 VAGDTFATFLDVLHLTPRGRFDIDMYESSFRLRGKTYDYKIQYQSIKKFFLLPKNDDTHT 337
Query: 147 FVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEV 206
+ + LDPP+R+GQT YP +V+Q + D + +L M++
Sbjct: 338 LITLGLDPPLRQGQTRYPFLVMQLKLDDEISIDLNMTDH--------------------- 376
Query: 207 FTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEE 266
G SG VK S+KA +G+L+ L+KSF F+PKP T + E
Sbjct: 377 -----HGHSG-----------------VKCSIKANEGLLFCLDKSFMFVPKPATYVQIEN 414
Query: 267 IDYVEFERHAAGGSNMHYFDLLIRLKTEQ-EHLFRNIQRNEYHNLFDFISGKGLKIMNLG 325
I + R S FD+ + LK EH F NI R E L +F K ++ N
Sbjct: 415 ISVITMSRVGGAISASRTFDITMTLKGGMGEHQFSNINREEQQPLEEFFKAKNIRFKNEM 474
Query: 326 DMKTTDGVAAVLQEDD 341
++ +AA L +D
Sbjct: 475 ADDSSALIAAALDNED 490
>gi|389585441|dbj|GAB68172.1| structure specific recognition protein, partial [Plasmodium
cynomolgi strain B]
Length = 354
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 165/306 (53%), Gaps = 15/306 (4%)
Query: 27 KNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFVGDENHPPAQVFRDKIMSMADVGA 86
K D+ +E ++ NE D L EI F P+ N DEN Q F++ ++ ++G
Sbjct: 2 KTDIAMELKNEENKKTNE-DFLSEIRFCYPHEN-----DENQN-FQNFKNDLLEKVNIGD 54
Query: 87 GGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHT 146
E + + I +L PRGRY +E++ +L G++ DF IQY+++ ++ L+PKSN
Sbjct: 55 SKSECIASLANIPLLVPRGRYEIEMYTKSFKLHGKSYDFTIQYTNINKMLLVPKSNSNQY 114
Query: 147 FVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEV 206
++ +L+ +++GQT YP I++Q D ++ ++ SEE + K KLE S G ++V
Sbjct: 115 VLIFSLNNKMKQGQTEYPFILIQLNNDDDMELDINASEEDVK---KYKLEKSLSGKAYDV 171
Query: 207 FTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEE 266
T + L PG +R+A++ + + S +A G LYPL K F F+ KP LI ++
Sbjct: 172 VTRLFTALVKKNAIIPGDYRTAKNEHGITCSYRAASGQLYPLNKYFLFIIKPVILISFDD 231
Query: 267 IDYVEFERHAAGGSNMH-YFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLG 325
I + F+R G N H +F L+I+ K + + NI +NEY L +F+ K + I +
Sbjct: 232 IVTLSFQR--TGNINQHRFFSLIIKHKRGMSYEYTNIDKNEYLPLLEFLKSKNINIQD-- 287
Query: 326 DMKTTD 331
D TD
Sbjct: 288 DANVTD 293
>gi|68063811|ref|XP_673901.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56492088|emb|CAI02497.1| hypothetical protein PB300791.00.0 [Plasmodium berghei]
Length = 415
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 159/292 (54%), Gaps = 12/292 (4%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQ 61
L F + +K AF ++ +++Q +Q K D+ +E D+ +D L EI F+ P+ N
Sbjct: 132 LIFDIDKKYAFNINTNNINQLNVQIKTDIAIELKNDENKQNTNEDVLSEIRFYYPHEN-- 189
Query: 62 FVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQ 121
DEN Q ++ ++ ++G E + + I +L PRGRY +E++ +L G+
Sbjct: 190 ---DENQN-FQDLKNNLLEKVNIGDSKSECIASLSNIPLLVPRGRYEIEMYSKTFKLHGK 245
Query: 122 ANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELL 181
+ DF +QYS++ ++ L+PK+N ++ +L+ I++GQT YP I++Q D + ++
Sbjct: 246 SYDFTVQYSNINKMLLVPKTNSNQYILIFSLNNKIKQGQTEYPFILIQLSNDDDMDLDIN 305
Query: 182 MSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAE 241
SEE + KLE + G ++V T + L+ PG +R+A++ + + S +A
Sbjct: 306 ASEEDIQNY---KLEKTLTGKAYDVVTRLFTALAKKNAIIPGDYRTAKNEHGITCSYRAA 362
Query: 242 DGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMH-YFDLLIRLK 292
G LYPL K F F+ KP LI ++I + F+R G N H +F L+I+ K
Sbjct: 363 SGQLYPLNKYFLFVVKPVILISFDDIVTLSFQR--TGNINQHRFFSLIIKHK 412
>gi|399219077|emb|CCF75964.1| unnamed protein product [Babesia microti strain RI]
Length = 487
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 169/321 (52%), Gaps = 11/321 (3%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGAN-EKDSLMEISFHIPNSNT 60
L F + +K A ++ + +++Q + K D+ +E + T N D L+E+ F IP +T
Sbjct: 122 LLFKIDKKPALDIDVNNIAQVTIPSKGDLAIE--LKSTLDRNISCDQLLEVRFCIPKGDT 179
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
D+ + + ++ + +G ++ F + + PRGR+ ++ ++ G
Sbjct: 180 ----DDFDYNLESLKQDLLERSGLGEVKSTSIALFTDVPSIVPRGRFELDFGRKGIKFHG 235
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
++ DF IQY +V R+FL+PK + PH V+ LD +R+GQT YP+IVLQF+ + + +L
Sbjct: 236 KSYDFSIQYLTVNRMFLVPKPHSPHVIFVIGLDIAVRQGQTKYPYIVLQFDHEQDTELQL 295
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKA 240
++++ T KLE K + V T + L G I P F+S++D +AV S +A
Sbjct: 296 NVTKDEAQTL---KLEQEIKDKTYNVITKLFSALVGKTIIIPEDFKSSKDQFAVACSYRA 352
Query: 241 EDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFR 300
G L+PL KS F+ KP +E++ +EF R + +F + + +K F
Sbjct: 353 GSGHLFPLPKSILFVVKPILFFRNEDVVSIEFLRTGL-ATQSRFFSVTVHVKGGNSFEFT 411
Query: 301 NIQRNEYHNLFDFISGKGLKI 321
NI +NEY L ++ + +GLK+
Sbjct: 412 NIDKNEYQLLSNYFTNRGLKV 432
>gi|320165273|gb|EFW42172.1| structure-specific recognition protein 1 [Capsaspora owczarzaki
ATCC 30864]
Length = 796
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 142/518 (27%), Positives = 224/518 (43%), Gaps = 83/518 (16%)
Query: 69 PPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQ 128
P ++F+ +I+ DV + +V+ + TPRGRY ++ + + L L GQ +DFKI
Sbjct: 261 PVTRLFQ-RILGKVDVAHTAGDVIVSLLDVNCQTPRGRYQMDFYPTMLTLHGQTHDFKIP 319
Query: 129 YSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETD-YVVQSELLMSE--- 184
++S+ + F+LP +Q FVV+ LDPP+R+GQT YP IV +T+ + EL M+E
Sbjct: 320 FASISKTFVLPHPDQFRVFVVLALDPPVRQGQTPYPFIVFLLQTEGREISVELNMTEAEI 379
Query: 185 --------ELLNTKYK--DKLEPSYKGLIHEV----FTTILRGLSGAKITKP-------- 222
+L+N + D +P++ + E+ + R LS + P
Sbjct: 380 AEKNLQVSKLINKNVREGDAPKPNHFAITKEMSGGEVMILARLLSAMSVRLPIQPAAASS 439
Query: 223 -GKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSN 281
K S Q GY K+S +A DG L+PLE +F F+ KP T I + +I V FER G S
Sbjct: 440 KDKAYSEQHGY--KASYRASDGYLFPLENAFIFVHKPLTYIHYSDIKTVTFER---GSSI 494
Query: 282 MHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISG----KGLKIM--------NLGDMKT 329
+ F I + F +I + E NL F + KG ++
Sbjct: 495 LKTFAFTIVTHSGTGFTFNSIPKEEQRNLEQFCNAKARSKGFSVVADKPPARGAAAAAGD 554
Query: 330 TDGVAAVLQEDDDDAVDPHLERIKNEAGGDESDEEDSDFVADKDDGGSPTDDSGEEDSDA 389
DD+ D + R+K E E +A D D+ + +SD
Sbjct: 555 DSDDEDGAIHSDDEENDSYKRRMKKEGHARE--------IAGDDYDSEDEDEDFQANSDV 606
Query: 390 SESGGEKEKPAKKESKKESSSVKASTSKKKSRDGDEDGK--------------KKKQKKK 435
E G E ++ S S S S + +G+ K +K KK
Sbjct: 607 EEVGEEFDENYTSSSDDSGSDSSDSGSGSEDENGEPKVKKAKKHKKEHKPKPVRKAPKKS 666
Query: 436 KDP--------NAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEER 487
P NAPK+ MS ++ ++ R K NP ++G +LG WK++ E+
Sbjct: 667 SSPTKKAAKDKNAPKKPMSSYMLWANENRAAFKAKNPDANVMELGSILGNAWKELGESEK 726
Query: 488 EPYESKARADKKRYKDEISGYKNPK--------PMDID 517
+ KA +K Y+ ++ Y+ K PMD+D
Sbjct: 727 NSWAEKATEARKAYEITLAEYEQKKKERAAAGEPMDVD 764
>gi|290978860|ref|XP_002672153.1| predicted protein [Naegleria gruberi]
gi|284085727|gb|EFC39409.1| predicted protein [Naegleria gruberi]
Length = 531
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 147/438 (33%), Positives = 216/438 (49%), Gaps = 48/438 (10%)
Query: 9 KQAFEVSLAD-VSQTQLQGKN-DVILEFHVDDTTGANEKDSLMEISFHIPNSN------- 59
K+ F +SLAD + Q KN +++LEF D+ T N L EI F P ++
Sbjct: 129 KELFSISLADDIKNCQKIPKNSELLLEFRDDEHTDKNSI-QLTEIRFVCPETSEPAEDQD 187
Query: 60 TQFVGDENHP----PAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSF 115
+ ++N A +KI AD+ V +F + +L PRG+Y+V+L S
Sbjct: 188 EEEQEEKNLAIKDMTADALHEKISQKADLSKDLGTPVASFSQMPVLIPRGKYNVDLFKSH 247
Query: 116 LRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYV 175
LRL G+ KI Y + LFLLPK H ++V++LD P R+GQ + HIV Q E
Sbjct: 248 LRLYGRTYVHKITYKQISTLFLLPKPGDQHMYLVISLDTPFRQGQKSHFHIVFQIEKHKT 307
Query: 176 VQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVK 235
+ L S +L + D L P G I+EVF +LR L+ K+ GK+ + + A+K
Sbjct: 308 LDEPL--SIKLEKNEMGD-LTPKMNGKIYEVFAKVLRSLTKKKLIGSGKYVTHGNDKALK 364
Query: 236 SSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQ 295
SLKA +G L+ LEKS FFL KP I H+EI ++F R ++G +FDL I LK +
Sbjct: 365 CSLKANEGQLFFLEKSVFFLHKPVIYIRHDEIKLIKFLRASSGN---RFFDLSIILKNGK 421
Query: 296 EHLFRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNE 355
H F NI +NE L +F+ K D+KT + DD +D +
Sbjct: 422 SHTFLNIDQNESELLSEFLKSK--------DLKTEKDI-----RDDKIKMD--------Q 460
Query: 356 AGGDESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSSVKAST 415
GD+ +E+D DFV D+ D E+D ++ + KE A ++K + +T
Sbjct: 461 IMGDDDEEDDEDFVGKSDEEDEDASDEDEDDLESETAALLKE--AGLDAKDD-----GTT 513
Query: 416 SKKKSRDGDEDGKKKKQK 433
K+K GD + KK K
Sbjct: 514 RKRKKSSGDSEKPSKKTK 531
>gi|429329163|gb|AFZ80922.1| structure-specific recognition protein family member protein [Babesia
equi]
Length = 1346
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 162/321 (50%), Gaps = 13/321 (4%)
Query: 6 VGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFVGD 65
+G E+ + Q + K D+ +E ++ + D L+EI F +PN D
Sbjct: 994 IGSNAGLEIDATSILQATIPTKTDLAIELKSNENLYS--VDDLVEIRFCVPNKT-----D 1046
Query: 66 ENHPPAQV--FRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 123
Q+ + + + + E + I ++ PRGRY +E ++L G++
Sbjct: 1047 SEDFEVQLEDLKQTFLLKSGLDELKSEKIALLMDIPLIVPRGRYEIEFTKKSIKLHGKSY 1106
Query: 124 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMS 183
D+ + +S+++R+FLLPK N PH ++ L+ P+R+GQT YP+IV+QF+ D +Q EL +
Sbjct: 1107 DYTLLFSNILRMFLLPKPNSPHINFILGLNQPMRQGQTRYPYIVMQFDMDDELQVELNLD 1166
Query: 184 EELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDG 243
E+ KLE + +G + V + + L I PG F+S + + KA G
Sbjct: 1167 EKETEAL---KLEKTLEGKTYSVVSRLFGALVNRSIVVPGDFKSDKGDSGFSCTYKATSG 1223
Query: 244 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ 303
L+PL +S F+ KP I E+I VEF R N +F ++I +K E+ F NI
Sbjct: 1224 HLFPLNRSLLFIVKPVIFIRFEDIVSVEFNRTGVVSQN-RFFAVIISMKGGMEYEFTNID 1282
Query: 304 RNEYHNLFDFISGKGLKIMNL 324
+ E+ +L +++ + +KI +L
Sbjct: 1283 KAEFEHLNAYLTSRDIKIKSL 1303
>gi|156088085|ref|XP_001611449.1| structure specific recognition protein [Babesia bovis T2Bo]
gi|154798703|gb|EDO07881.1| structure specific recognition protein, putative [Babesia bovis]
Length = 485
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 155/312 (49%), Gaps = 9/312 (2%)
Query: 13 EVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFVGDENHPPAQ 72
++ DV+Q + K D+ +EF G D LMEI F IPN D+N +
Sbjct: 135 DIDAKDVTQVTVPTKTDLAVEFK--QNKGYINGDELMEIRFCIPNKPDV---DDNELALE 189
Query: 73 VFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSV 132
+ + A + E + + ++ PRGR+ +E ++ G++ D+ + ++++
Sbjct: 190 DLKQTFLLKAGLDELKSETLAFLTDVPLIVPRGRFEIEFSRKHIKYHGKSYDYTMFFTNI 249
Query: 133 VRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYK 192
R+FL+PK N PH ++ L P+R+GQT YP +V+QF+ + ++ E+ M EE L +
Sbjct: 250 SRMFLVPKPNSPHINFIIGLHQPMRQGQTRYPFVVMQFDAEEDIELEINMPEEDLESM-- 307
Query: 193 DKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSF 252
KLE G V T + L I PG+F+S ++ + KA G ++PL +S
Sbjct: 308 -KLEKVMTGKTFNVVTKLFGTLVNKPIVVPGEFKSEKEEAGFSCTYKATSGYMFPLNRSL 366
Query: 253 FFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFD 312
F+ KP I +EI VEF R N +F I K QE+ F N+ R E+ L
Sbjct: 367 LFIVKPVIFIRFDEIISVEFSRTGVSTQN-RFFAFSISTKNGQEYEFTNVDRAEFEPLSK 425
Query: 313 FISGKGLKIMNL 324
+++ + +KI L
Sbjct: 426 YLASRDVKIKRL 437
>gi|349806433|gb|AEQ18689.1| putative ssrp1 protein [Hymenochirus curtipes]
Length = 280
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/310 (32%), Positives = 155/310 (50%), Gaps = 32/310 (10%)
Query: 201 GLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPT 260
G ++E+ + +++ L KIT PG F+ + S KA G+LYPLE+ F ++ KPP
Sbjct: 3 GCLYEMVSRVMKALVNRKITVPGNFQGHSGSQCITCSYKASSGLLYPLERGFIYVHKPPV 62
Query: 261 LILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLK 320
+ +E++ V F R G + FD I K ++ F +I+R EY LFDF++ K L
Sbjct: 63 HLRFDEVNCVNFAR---GTTTTRSFDFEIETKQGSQYTFSSIEREEYGKLFDFVNAKKLS 119
Query: 321 IMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDESDEEDSDFVADKDDGGSPTD 380
I N G + + D+D D +LER+K E G + DSD + D+ +P
Sbjct: 120 IKNRGLKEGMKPAYDDYADSDEDQHDAYLERMKEE--GKIRENADSDDTGETDESFNP-- 175
Query: 381 DSGEEDSDASESGGEKEKPAKKESKKESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNA 440
GEE+ + +E+ K KK K + S K KDP+A
Sbjct: 176 --GEEEDEVAEAKKAKIVKEKKPRKNQES-----------------------KNNKDPSA 210
Query: 441 PKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKR 500
PKR MS ++ + RE IK NPGI+ TD+ + GE WK M+ E++E ++ +A K+
Sbjct: 211 PKRPMSAYMPWLNASREKIKGENPGISITDLSKKAGEIWKSMNREKKEEWDRRAEEAKRD 270
Query: 501 YKDEISGYKN 510
Y+ + YK+
Sbjct: 271 YEKAMKEYKS 280
>gi|145535313|ref|XP_001453395.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421106|emb|CAK85998.1| unnamed protein product [Paramecium tetraurelia]
Length = 410
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 185/375 (49%), Gaps = 27/375 (7%)
Query: 16 LADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIP-------------NSNTQF 62
L ++ + +Q KND++L+ D+ A +D L E+ F+IP N Q
Sbjct: 35 LKRITNSNIQ-KNDIVLQLSTDEC--AENEDMLCEVRFYIPPKEQKAEKKKQESNEEEQ- 90
Query: 63 VGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQA 122
DE QV ++ I+ A +G G ++++T + ++ PRG+Y+++ +R G
Sbjct: 91 --DEISYLQQV-QNHIVKKAKIG-GSSDSILTIHEVPLIVPRGKYTMDFFKKDIRFHGNT 146
Query: 123 NDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLM 182
F Y S+ R FLLP ++ + +VV L+ PI++GQT Y +IV+QF D Q E+
Sbjct: 147 YQFTTDYKSITRFFLLPMPDEVNLSLVVGLENPIKQGQTAYNYIVMQFRKDLEAQIEMKY 206
Query: 183 SEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAED 242
+ E L+ + Y G + ++ IL ++G K+ P F+ + ++ S+
Sbjct: 207 TREQLDNIGWKGIRLEYSGSMFDIVCDILSEITGIKVVSPKNFKCKNGLFCLRCSVVPHS 266
Query: 243 GVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNI 302
G L+PLEKS ++ KP I H++I + F+R N +FD+ I K HLF +
Sbjct: 267 GFLFPLEKSLLYIQKPVIYIKHDDIKEIIFQRITQTTQN-KFFDIKIVTKNA-SHLFSTV 324
Query: 303 QRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDESD 362
R E NL + + K L++ + + +G+ + +D + + + ++ +SD
Sbjct: 325 DREELDNLSQYFNSKKLQVKKIQE--ENEGIKNGKDDSEDGSQNGNDHKLT--LSQMDSD 380
Query: 363 EEDSDFVADKDDGGS 377
E+D DF A +D S
Sbjct: 381 EDDEDFQAQEDSYNS 395
>gi|194695942|gb|ACF82055.1| unknown [Zea mays]
Length = 200
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 122/204 (59%), Positives = 151/204 (74%), Gaps = 6/204 (2%)
Query: 322 MNLGDM-KTTDGVAA-VLQEDDDDAVDPHLERIKNEAGGDESDEEDSDFVADKDDGGSPT 379
MNLG + GV VL++ DDDAVDPHLERIKN+AG +ESDEED DFVADKDD GSPT
Sbjct: 1 MNLGGDGQGASGVVTDVLRDTDDDAVDPHLERIKNQAGDEESDEEDEDFVADKDDSGSPT 60
Query: 380 DDSGEEDSDASESGGEKEKPAKKESKKESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPN 439
DDSG+E+SDAS+SGGEKEK +KKE+ K K K RD DE +KKK KKKKDPN
Sbjct: 61 DDSGDEESDASDSGGEKEKSSKKEASSSKPVQK---RKHKGRD-DEGQEKKKPKKKKDPN 116
Query: 440 APKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKK 499
APKRAM+ F++FS ER N+K SNP + T++ + LGE W+KMS EE++PY +A+ DKK
Sbjct: 117 APKRAMTPFMYFSMAERGNMKSSNPDLPTTEIAKKLGEMWQKMSGEEKQPYIQQAQVDKK 176
Query: 500 RYKDEISGYKNPKPMDIDSGNESD 523
RY+ E + Y+ +D+DSGNESD
Sbjct: 177 RYEKESAVYRGEATVDVDSGNESD 200
>gi|340383933|ref|XP_003390470.1| PREDICTED: FACT complex subunit SSRP1-like, partial [Amphimedon
queenslandica]
Length = 410
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 114/348 (32%), Positives = 177/348 (50%), Gaps = 40/348 (11%)
Query: 185 ELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGV 244
E L KY KL +G + EVF +++ L G K+ PG F++ AV S KA G
Sbjct: 1 EDLKEKYGGKLTQEMEGPLMEVFARLMKVLVGKKLMVPGSFKNNNGQNAVACSCKATAGF 60
Query: 245 LYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQR 304
LYPLEK F F+ KP I E+I V F R A+GG + FD I + H F ++ R
Sbjct: 61 LYPLEKGFMFVHKPALFIKFEDIANVNFARMASGGVS-RSFDFDIETREGVVHHFSSLMR 119
Query: 305 NEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDESDEE 364
++Y L +F++ K LKI + G K L + D DP+L R+K E G+++ E
Sbjct: 120 DDYTRLHEFVTEKRLKIKDKGSSKVHVSYNDELSGNSSDEHDPYLARMKAE--GEQASSE 177
Query: 365 D----------SDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKES------ 408
D SDFVA + S +DD E DSDA+ S G + A+KE+K S
Sbjct: 178 DGKSSNTTYTYSDFVAKE----SGSDDDLEYDSDAAVSDGGSTQGAQKETKGSSDESGEE 233
Query: 409 ---SSVKASTSKKKSRDGDEDGKKKKQKKKK------------DPNAPKRAMSGFIFFSQ 453
+ +KK+S+ KK+K++K DPN PK+ +S ++ + Q
Sbjct: 234 EEEEEEEEPKAKKRSKPQTHTNVAKKRKQEKGGATGKKEKKKKDPNCPKKPLSSYMLWLQ 293
Query: 454 MERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRY 501
R ++KK +P ++ T++ + G+ WK++ +++ +E KA+ K++Y
Sbjct: 294 EMRPSLKKKHPELSITEMSKKAGQLWKEL--KDKSKWEEKAKKLKEQY 339
>gi|84996169|ref|XP_952806.1| structure-specific recognition protein (SSRP) 1 [Theileria annulata
strain Ankara]
gi|65303804|emb|CAI76181.1| structure-specific recognition protein (SSRP) 1, putative
[Theileria annulata]
Length = 490
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 160/316 (50%), Gaps = 9/316 (2%)
Query: 6 VGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFVGD 65
+ E+ + Q + K D+ +E + + N D L+EI F +P ++ +
Sbjct: 142 INNNSGLEIDAQSIIQATIPSKTDLAIE--LKNANPLNNSDDLVEIRFCVP---SKLDPE 196
Query: 66 ENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDF 125
+ + + + + + E + I ++ PRGRY +E ++L G++ D+
Sbjct: 197 DAEIKLEDLKQTFLVKSGLDEMKSEKIALLMDIPLIVPRGRYEIEFTKRSIKLHGKSYDY 256
Query: 126 KIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEE 185
+ +++++R+FLLPK N P+ ++ L +R+GQT Y +IV+QFE+D+ + +L + +
Sbjct: 257 TLLFTNIIRMFLLPKPNSPYINFILGLSQSMRQGQTRYAYIVMQFESDHETKVDLNLQD- 315
Query: 186 LLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVL 245
N + KL+ +G + V + + L I PG F+S + A+ + KA G L
Sbjct: 316 --NDLKQYKLDKVLEGKTYNVVSRLFGSLVNRSIVVPGDFKSEKGDSAISCTYKATSGHL 373
Query: 246 YPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRN 305
+PL +S F+ KP I E+I VEF R N +F +L+ ++ E+ F NI +
Sbjct: 374 FPLNRSLLFIVKPVIFIRFEDIVSVEFSRTGVVTQN-RFFAILVSMRGGIEYEFTNIDKT 432
Query: 306 EYHNLFDFISGKGLKI 321
E+ NL +++ K +K+
Sbjct: 433 EFKNLNEYLMTKDIKV 448
>gi|145516881|ref|XP_001444329.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124411740|emb|CAK76932.1| unnamed protein product [Paramecium tetraurelia]
Length = 434
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 168/351 (47%), Gaps = 32/351 (9%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIP----- 56
L Q ++ L V + Q KND++L+ DD G N+ D L E+ F+IP
Sbjct: 21 LCMKYNQSNIIKLPLKKVVNSNTQ-KNDIVLQLSTDDY-GEND-DMLCEVRFYIPPQEQK 77
Query: 57 -------------------NSNTQFVGDENHPP-AQVFRDKIMSMADVGAGGEEAVVTFE 96
++ P Q +++I++ A +G ++++T
Sbjct: 78 LKQEKEKKKQENEENQISMEEEEDGADEDAEPTFQQKLQNEILTKAKIGQSSADSILTIH 137
Query: 97 GIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPI 156
+ ++ PRG+Y+++ +R G F Y + R FLLP ++ + V+ L+ P
Sbjct: 138 DVPLIVPRGKYTMDFFTKDIRFHGNTYQFTTDYKGISRFFLLPMPDEINLSFVIGLEHPF 197
Query: 157 RKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSG 216
++GQT Y +V+QF+ D + +L S + L+ ++ Y G ++++ +L ++G
Sbjct: 198 KQGQTTYNFLVMQFKKDVENEIKLKYSRQKLDEIGWKGIKEEYSGPLYDIVCEVLAEITG 257
Query: 217 AKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHA 276
K+ P F+S + ++ S+ G L+PLEKS +L KP I HEEI V F+R
Sbjct: 258 IKVVSPKNFKSKNGLFCLRCSVGPHSGFLFPLEKSLIYLQKPVLHIKHEEIKEVIFQR-- 315
Query: 277 AGGSNMH-YFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGD 326
G +N++ +FD+ I K Q LF I+R+E NL + K + + L D
Sbjct: 316 IGSTNLNKFFDVKIVYKN-QNQLFSGIERDELDNLTSYFQQKKIAVRKLQD 365
>gi|167381161|ref|XP_001735599.1| FACT complex subunit SSRP1-A [Entamoeba dispar SAW760]
gi|165902333|gb|EDR28189.1| FACT complex subunit SSRP1-A, putative [Entamoeba dispar SAW760]
Length = 378
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 170/336 (50%), Gaps = 21/336 (6%)
Query: 12 FEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFVGDENHPPA 71
F+++ D +++ + K +V +EF DD+ D+L EI F P + Q + A
Sbjct: 33 FDMNPKDFTKSSISNKTEVSIEF--DDSKDG---DALSEIKFFAPQTEQQ----NDKDNA 83
Query: 72 QVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSS 131
D+I + A G+E V FE I L+P+G Y V+++ +R+Q + DFKI Y
Sbjct: 84 TELYDRIAEVTPTNAAGKE-VCLFENIGFLSPKGHYDVKIYEDSVRVQNKTYDFKINYKD 142
Query: 132 VVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKY 191
+VR + L K ++ +F ++ L P++KG+++Y +V++ ++ V +EL +++E N
Sbjct: 143 IVRYYKLRK-DEDTSFFILNLSNPLKKGKSIYECLVMELSSNEEVTAELHLTKEFEN--- 198
Query: 192 KDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKS 251
K LE S ++F + R L I G D + +K +L +G L+P+ S
Sbjct: 199 KTGLEESMTDNELDLFVELFRSLCNVPIISSGHKFKTNDSHFLKCNLSTNEGFLFPMSDS 258
Query: 252 FFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHL-FRNIQRNEYHNL 310
F F+ K +I+ ++I V+ R A N FD +I LK + L F + RNEY NL
Sbjct: 259 FIFVFKRIRIIMFKDIKSVDILRMNASNDN-KTFDFVINLKGRRGSLQFTGMNRNEYENL 317
Query: 311 FDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVD 346
++ LK+ +T ++E+DDD+ D
Sbjct: 318 VGYLKESQLKL-----EETLQNTERRMEEEDDDSGD 348
>gi|145535097|ref|XP_001453287.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124420998|emb|CAK85890.1| unnamed protein product [Paramecium tetraurelia]
Length = 425
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 162/317 (51%), Gaps = 24/317 (7%)
Query: 27 KNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFVGDENHPPA--------------- 71
KND++L+ ++ G N+ D L E+ F IP + ++ A
Sbjct: 45 KNDIVLQLTTEEC-GEND-DMLCEVRFFIPPQEQKVKQEKKKQDADSDQEKVDEEEDEEP 102
Query: 72 ---QVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQ 128
Q +++I+ A +G ++++T + ++ PRGRY+++ +R G F
Sbjct: 103 TFQQQLQNEILVKAKIGQSSADSILTINDVPLIVPRGRYTMDFFKKDIRFHGNTYQFTTD 162
Query: 129 YSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLN 188
Y + R FLLP ++ + +V+ L+ P ++GQT Y ++V+QF+ DY + +L + L+
Sbjct: 163 YKGISRFFLLPMPDEINLSLVIGLEHPFKQGQTAYNYLVMQFKKDYENEIKLKYQRQQLD 222
Query: 189 TKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPL 248
+++ Y G +++ +L ++G K+ P F++ ++ S+ G L+PL
Sbjct: 223 EIGWKEIKEEYSGPLYDTVCELLSEITGIKVVTPKNFKTKNGLCCLRCSVGPHSGFLFPL 282
Query: 249 EKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMH-YFDLLIRLKTEQEHLFRNIQRNEY 307
EKS +L KP I HEEI V F+R G +N++ +FD+ + K + LF +I+++E
Sbjct: 283 EKSLIYLQKPVLHIKHEEIKEVIFQR--IGQTNLNKFFDVKVIYKNSNQ-LFSSIEKDEL 339
Query: 308 HNLFDFISGKGLKIMNL 324
NL ++S K + + L
Sbjct: 340 DNLTQYLSTKKIAVRKL 356
>gi|324501567|gb|ADY40695.1| FACT complex subunit SSRP1-A [Ascaris suum]
Length = 478
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/206 (38%), Positives = 122/206 (59%), Gaps = 8/206 (3%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L F V +K FE+ L++VS GK++ +LEFH +D SLME+ FHIP T
Sbjct: 279 VLEFEVDEKPCFEIPLSNVSNCT-SGKSEAVLEFHQNDDCAV----SLMEMRFHIP---T 330
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
DE+ P + FR +M A + ++ V T + I TPRGRY ++++ + L L G
Sbjct: 331 DPDADEDADPVEEFRRAVMQYAGIETETDQPVATLQQILCTTPRGRYDIKVYQNHLSLHG 390
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ D+KI +++RLFLLP + H + V++L+PPIR+GQT Y +VL+F D V+ +L
Sbjct: 391 KTYDYKIPIKTIMRLFLLPHKDGRHMYFVISLNPPIRQGQTRYHFLVLEFAKDEEVELDL 450
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEV 206
+++E L +YK KL+ G + EV
Sbjct: 451 GLTQEQLKEQYKGKLDKKLSGNVFEV 476
>gi|67471840|ref|XP_651832.1| structure specific recognition protein [Entamoeba histolytica
HM-1:IMSS]
gi|56468614|gb|EAL46446.1| structure specific recognition protein, putative [Entamoeba
histolytica HM-1:IMSS]
gi|449706649|gb|EMD46453.1| structure specific recognition protein, putative [Entamoeba
histolytica KU27]
Length = 376
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 168/334 (50%), Gaps = 25/334 (7%)
Query: 12 FEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFVGDENHPPA 71
F+++ D +++ + K +V +EF DD+ D+L EI F P + Q + A
Sbjct: 33 FKMNPKDFTKSSISNKTEVSIEF--DDSKDG---DALSEIKFFAPQTEQQ----NDKDNA 83
Query: 72 QVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSS 131
DKI + A G+E V FE I L+P+G Y V+++ +R+Q + DFKI Y
Sbjct: 84 TELYDKIAEVTPTNAAGKE-VCLFENIGFLSPKGHYDVKIYEDSVRVQNKTYDFKINYKD 142
Query: 132 VVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKY 191
+ R + L K ++ +F ++ L P++KG+++Y +V++ ++ V +EL +++E +
Sbjct: 143 IARYYKLRK-DEDTSFFILNLSNPLKKGKSVYECLVMELSSNEEVTAELHLTKE-----F 196
Query: 192 KDK--LEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLE 249
+DK LE S ++F + R L I G D + +K +L +G L+P+
Sbjct: 197 EDKTGLEESMTDNELDLFVELFRSLCNVPIISSGHKFKTNDSHFLKCNLSTNEGFLFPMS 256
Query: 250 KSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHL-FRNIQRNEYH 308
SF F+ K +I+ ++I V+ R A N FD +I LK + L F + RNEY
Sbjct: 257 DSFIFVFKRIRIIMFKDIKSVDILRMNASNDN-KTFDFVINLKGRRGSLQFTGMNRNEYE 315
Query: 309 NLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDD 342
NL ++ LK+ +T ++EDDD
Sbjct: 316 NLVGYLKESQLKL-----EETLQNTERRMEEDDD 344
>gi|407035559|gb|EKE37743.1| structure-specific recognition protein [Entamoeba nuttalli P19]
Length = 376
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 168/334 (50%), Gaps = 25/334 (7%)
Query: 12 FEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFVGDENHPPA 71
F+++ D +++ + K +V +EF DD+ D+L EI F P + Q + A
Sbjct: 33 FKMNPKDFTKSSISNKTEVSIEF--DDSKDG---DALSEIKFFAPQTEQQ----NDKDNA 83
Query: 72 QVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSS 131
DKI + A G+E V FE I L+P+G Y V+++ +R+Q + DFKI Y
Sbjct: 84 TELYDKIAEVTPTNAAGKE-VCLFENIGFLSPKGHYDVKIYEDSVRVQNKTYDFKINYRD 142
Query: 132 VVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKY 191
+ R + L K ++ +F ++ L P++KG+++Y +V++ ++ V +EL +++E +
Sbjct: 143 IARYYKLRK-DEDTSFFILNLSNPLKKGKSVYECLVMELSSNEEVTAELHLTKE-----F 196
Query: 192 KDK--LEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLE 249
+DK LE S ++F + R L I G D + +K +L +G L+P+
Sbjct: 197 EDKTGLEESMTDNELDLFVELFRSLCNVPIISSGHKFKTNDSHFLKCNLSTNEGFLFPMS 256
Query: 250 KSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHL-FRNIQRNEYH 308
SF F+ K +I+ ++I V+ R A N FD +I LK + L F + RNEY
Sbjct: 257 DSFIFVFKRIRIIMFKDIKSVDILRMNASNDN-KTFDFVINLKGRRGSLQFTGMNRNEYE 315
Query: 309 NLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDD 342
NL ++ LK+ +T ++EDDD
Sbjct: 316 NLVGYLKESQLKL-----EETLQNTERRMEEDDD 344
>gi|340503968|gb|EGR30466.1| structure-specific recognition, putative [Ichthyophthirius
multifiliis]
Length = 431
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 164/325 (50%), Gaps = 15/325 (4%)
Query: 8 QKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIP----------N 57
QK+ ++ L + + + KND++++ + D ++D L E+ ++P
Sbjct: 29 QKRLCKLPLNKIQNSTV-NKNDIVIDLNTLDI--KEDEDVLCEMRLYVPFQQENQSKEQE 85
Query: 58 SNTQFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLR 117
+ ++ A +I+S A +G ++V FE + +L PRG+YS+++ + +
Sbjct: 86 NEQNEAENQKASRADQLNSEIISKAKIGQYSGASIVKFEDLPLLVPRGKYSLDMFQNSAK 145
Query: 118 LQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQ 177
G + ++ ++Y ++++ FLLP ++ + V+ L+ P++ G T++ IV+QF D Q
Sbjct: 146 FHGSSYNYIVEYKNIIKAFLLPLPDEVNIAFVLGLEQPLKYGNTVHSSIVMQFRKDIQQQ 205
Query: 178 SELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSS 237
++ + EL +LE Y+G ++E+ I + L + PG F+S+ VK +
Sbjct: 206 VKVNLDPELKKQSNLKELEEQYEGPLYEIVGQIFKQLCQIPVIMPGGFQSSDGQCCVKCT 265
Query: 238 LKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEH 297
LK G+L+P++KS F+ KP + +I VEFER N FD+ + K+ H
Sbjct: 266 LKTHQGMLFPMKKSLIFIYKPVIHVTLTDITKVEFERVGNASLN-KLFDIKVFTKSSNAH 324
Query: 298 LFRNIQRNEYHNLFDFISGKGLKIM 322
F +R E L ++ K ++I+
Sbjct: 325 -FIGFERKELDKLLEYFKSKNIQII 348
>gi|219116578|ref|XP_002179084.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409851|gb|EEC49782.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 160
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 103/163 (63%), Gaps = 5/163 (3%)
Query: 101 LTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQ 160
LTPRGRYS+EL+ FLRL+GQ D+KI+Y + RLFLLPK ++ H V+ LD PIR+GQ
Sbjct: 1 LTPRGRYSIELYDYFLRLRGQKYDYKIKYDDINRLFLLPKPDEVHMAFVIALDKPIRQGQ 60
Query: 161 TLYPHIVLQF--ETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAK 218
Y ++VLQ E D V + + EE L +Y +L+P +G + + + ++ K
Sbjct: 61 QRYQYLVLQATKEPDEVTVN---LDEETLKNEYGGELQPVMRGSLSNLVAKTFKVIAKKK 117
Query: 219 ITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTL 261
+ PGKF +A VK +++A +G+LYPLEK F F+ KPP L
Sbjct: 118 VFIPGKFSNAAQQACVKCAVRANEGLLYPLEKQFVFIHKPPIL 160
>gi|146165332|ref|XP_001014803.2| Structure-specific recognition protein [Tetrahymena thermophila]
gi|146145543|gb|EAR94676.2| Structure-specific recognition protein [Tetrahymena thermophila
SB210]
Length = 437
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 155/316 (49%), Gaps = 30/316 (9%)
Query: 26 GKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFVGDENHPP--------------- 70
K D++++ + D +++D L E+ IP D P
Sbjct: 44 NKTDIVIDLNTVDL--QDDEDQLCEMRLFIPQQQ-----DAQMKPEDDGEGEEKEGEDSV 96
Query: 71 ---AQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKI 127
A +I++ A +G +++V FE I++L PRG+Y ++++ +R G + ++ +
Sbjct: 97 GGYADQLNSEIITKAKIGQYSGQSIVKFEDISLLVPRGKYQLDMYKKTVRFHGSSFNYIV 156
Query: 128 QYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMS-EEL 186
+YS+V++ FLLP+ ++ H V+ LD P++ G T++ +IV+QF+ + ++ + EE
Sbjct: 157 EYSNVIKGFLLPQPDEVHVAFVLGLDQPLKIGNTVHSYIVMQFKKEQKANIKVNIDPEEK 216
Query: 187 LNTKYKDKLEPSYKGLIHEVFTTILRGLS-GAKITKPGKFRSAQDGYAVKSSLKAEDGVL 245
K KD L+ Y G ++E+ + + L +I P F+S+ +K +LK G+L
Sbjct: 217 KEDKLKD-LDEEYDGFLYEIAGQLFKTLCNNVQIIMPAGFQSSDKQNCLKCTLKTHQGLL 275
Query: 246 YPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRN 305
YP+ KS F+ KP I +I VEF R N FD+ + KT F +R
Sbjct: 276 YPMRKSLIFIYKPVIHIQISDIQKVEFNRVGNATLN-KLFDVKVFTKTTTPQFF-GFERK 333
Query: 306 EYHNLFDFISGKGLKI 321
E L ++ K +KI
Sbjct: 334 ELDVLLEYFKSKNIKI 349
>gi|240279641|gb|EER43146.1| FACT complex subunit pob3 [Ajellomyces capsulatus H143]
Length = 332
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 116/212 (54%), Gaps = 32/212 (15%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHV--DDTTGANE--------------- 44
L F V + AFE+ +++S T L GKN+V +EF + D TGAN
Sbjct: 121 LAFNVQNRPAFEIPYSEISNTNLAGKNEVAVEFSLPADGVTGANGQLEGSTKNRGRKAGA 180
Query: 45 -KDSLMEISFHIPNS-----NTQFVGDEN---------HPPAQVFRDKIMSMADVGAGGE 89
+D L+E+ F+IP + + DEN A +F + +M A++G
Sbjct: 181 GRDELVEMRFYIPGTALKKEKPEGEEDENGVDGEEAEEQNAANLFYETLMDKAEIGDVAG 240
Query: 90 EAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVV 149
+ TF + LTPRGR+ ++++ S RL+G+ D+KIQY S+ + FLLPK++ HT +
Sbjct: 241 DTFATFLDVLHLTPRGRFDIDMYESSFRLRGKTYDYKIQYQSIKKFFLLPKNDDTHTLIT 300
Query: 150 VTLDPPIRKGQTLYPHIVLQFETDYVVQSELL 181
+ LDPP+R+GQT YP +V+Q + D + +L+
Sbjct: 301 LGLDPPLRQGQTRYPFLVMQLKLDDEISIDLI 332
>gi|10179001|emb|CAC08510.1| SSRP1-like protein [Zygosaccharomyces rouxii]
Length = 542
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 134/259 (51%), Gaps = 4/259 (1%)
Query: 66 ENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDF 125
E A+ F +++ AD+G +++V+F+ + TPRGRY ++++ + +RL+G+ ++
Sbjct: 270 EEKTAAEAFHEELKEKADIGEVSGDSIVSFQDVFFATPRGRYDIDIYKNSIRLRGKTYEY 329
Query: 126 KIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEE 185
K+Q+ + + LPK+ + ++ + T P I Q + Q + + +E
Sbjct: 330 KLQHRQIPKDRSLPKAMILPSSGLIHRTTITQGQTTTLPCITFQKDER---QRCIDLEDE 386
Query: 186 LLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVL 245
YKD+L+ Y H V + +L+GL+G ++ PG+++S D AV S KA +G L
Sbjct: 387 DFEANYKDRLKREYDAKTHIVVSHVLKGLTGRRVMVPGEYKSKYDQCAVSCSYKANEGYL 446
Query: 246 YPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQ-EHLFRNIQR 304
YPL+ +FFFL KP I ++ V R ++ FDL + L+ + F NI +
Sbjct: 447 YPLDNAFFFLTKPTLYIPFMDVSSVNISRAGQASTSSRTFDLEVTLRGNRGSTTFANISK 506
Query: 305 NEYHNLFDFISGKGLKIMN 323
E L F+ + L++ N
Sbjct: 507 EEQQLLEQFLKSRNLRVKN 525
>gi|440291756|gb|ELP84998.1| FACT complex subunit SSRP1-A, putative [Entamoeba invadens IP1]
Length = 371
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 160/304 (52%), Gaps = 18/304 (5%)
Query: 20 SQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFVGDENHPPAQVFRDKIM 79
+++ L K +V +EF DD A + D L EI F P + Q +E +++ DK+
Sbjct: 39 TKSSLSNKTEVSVEF--DD---AGDGDVLTEIRFFAPQTEQQ---NEKDNATELY-DKVA 89
Query: 80 SMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLP 139
+ A G+E V FE +A L+P+G Y V+++ +R+Q DFKI+Y+ + + +
Sbjct: 90 EVTPSNASGKE-VCLFENVAFLSPKGHYDVKIYEDSVRVQNNTFDFKIKYTDIQLYYKMR 148
Query: 140 KSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSY 199
K N+ +F V++L P +KG+++Y ++++ T + +EL ++++ + K LE S
Sbjct: 149 KDNET-SFFVLSLSNPFKKGKSVYECLIMELSTTEEITAELNLTKDF---EKKTGLEASM 204
Query: 200 KGLIHEVFTTILRGLSGAKITKPG-KFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKP 258
++F + + L IT G KF++ D + +K ++ +G LYP+ F FL K
Sbjct: 205 TDNELDLFIELFKSLHPTTITPSGMKFKTG-DSHYIKCNMSTNEGFLYPMTDCFIFLYKR 263
Query: 259 PTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHL-FRNIQRNEYHNLFDFISGK 317
+ +EI+ V+ R A N FDLL+ LK + L F + R Y +L +F+
Sbjct: 264 IKIAPFKEINSVDILRMNAANDN-KTFDLLLDLKGRKGTLQFNGMSREVYDDLVEFLKQS 322
Query: 318 GLKI 321
GLK+
Sbjct: 323 GLKL 326
>gi|70927509|ref|XP_736131.1| structure specific recognition protein [Plasmodium chabaudi
chabaudi]
gi|56510406|emb|CAH76375.1| structure specific recognition protein, putative [Plasmodium
chabaudi chabaudi]
Length = 273
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 127/238 (53%), Gaps = 9/238 (3%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQ 61
L F + +K AF ++ +++Q +Q K D+ +E D+ +D L EI F+ P+ N
Sbjct: 45 LIFDIDKKYAFNINTNNINQLNVQIKTDIAIELKNDENKQNTNEDVLSEIRFYYPHEN-- 102
Query: 62 FVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQ 121
DEN Q ++ ++ ++G E + + I +L PRGRY +EL+ +L G+
Sbjct: 103 ---DENQN-FQDLKNNLLDKVNIGDSKSECIASLSNIPLLVPRGRYEIELYSKTFKLHGK 158
Query: 122 ANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELL 181
+ DF +QYS++ ++ L+PK+N ++ +L+ I++GQT YP I++Q D + ++
Sbjct: 159 SYDFTVQYSNINKMLLVPKTNSNQYILIFSLNNKIKQGQTEYPFILIQLNNDDDMDLDIN 218
Query: 182 MSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLK 239
EE + KLE + G ++V T + L+ PG +R+A++ + + S +
Sbjct: 219 APEEDIKNY---KLEKTLTGKAYDVVTRLFTALAKKNAIIPGDYRTAKNEHGITCSYR 273
>gi|19074524|ref|NP_586030.1| STRUCTURE-SPECIFIC RECOGNITION PROTEIN [Encephalitozoon cuniculi
GB-M1]
gi|19069166|emb|CAD25634.1| STRUCTURE-SPECIFIC RECOGNITION PROTEIN [Encephalitozoon cuniculi
GB-M1]
gi|449329533|gb|AGE95804.1| structure-specific recognition protein [Encephalitozoon cuniculi]
Length = 425
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/323 (29%), Positives = 151/323 (46%), Gaps = 44/323 (13%)
Query: 13 EVSLADV--------SQTQLQGKND-VILEFHVDDTTGANEKDSLMEISFHIPNSNTQFV 63
E+ +ADV Q L+ +N I E VDD D E+S + + +FV
Sbjct: 96 ELEIADVLCGELGINGQKALEFRNTKTIFEIPVDDIESV--VDIRNELSVSLRDMEIRFV 153
Query: 64 GDENHPPAQVFRDKIMSMADVGAGGEEAV----VTFEGIAILTPRGRYSVELHLSFLRLQ 119
D ++ ++ G +V + EG+++ PRG+++ +LRL
Sbjct: 154 SDRK------------TIEEIKGGCSSSVDDEILKMEGLSLAYPRGKFNFIFFRDYLRLV 201
Query: 120 GQANDFKIQYSSVVRLFLLPKS--NQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQ 177
G + D KI Y S+ L++L K +VV+ DPPIR+GQT Y H+V+ F+ V+
Sbjct: 202 GSSYDHKIYYKSIKMLYVLEKGYIRDGERYVVIGADPPIRQGQTRYDHVVVAFDD---VE 258
Query: 178 SELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSS 237
EL +S+E +L+ Y GL+ E+F ++ L K + F S ++ +
Sbjct: 259 RELSVSDE--------RLKGEYSGLLSEIFAEVMEALCVIKAVRSS-FESRDGMRCLRCA 309
Query: 238 LKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEH 297
+KA +G LYPL+ FLPK L L EI VEF R FD+ L E +
Sbjct: 310 MKAYEGQLYPLDDCMLFLPKAVRLDLG-EISLVEFSRINLSSMQAKTFDM--TLFCEGPY 366
Query: 298 LFRNIQRNEYHNLFDFISGKGLK 320
F + ++E+ L + GKG+K
Sbjct: 367 TFNGLSKDEFGALEQYFHGKGIK 389
>gi|70917816|ref|XP_732984.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56504359|emb|CAH84175.1| hypothetical protein PC300891.00.0 [Plasmodium chabaudi chabaudi]
Length = 202
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 114/211 (54%), Gaps = 9/211 (4%)
Query: 51 ISFHIPNSNTQFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVE 110
I F+ P+ N DEN Q ++ ++ ++G E + + I +L PRGRY +E
Sbjct: 1 IRFYYPHEN-----DENQN-FQDLKNNLLDKVNIGDSKSECIASLSNIPLLVPRGRYEIE 54
Query: 111 LHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQF 170
L+ +L G++ DF +QYS++ ++ L+PK+N ++ +L+ I++GQT YP I++Q
Sbjct: 55 LYSKTFKLHGKSYDFTVQYSNINKMLLVPKTNSNQYILIFSLNNKIKQGQTEYPFILIQL 114
Query: 171 ETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQD 230
D + ++ EE + KLE + G ++V T + L+ PG +R+A++
Sbjct: 115 NNDDDMDLDINAPEEDIKNY---KLEKTLTGKAYDVVTRLFTALAKKNAIIPGDYRTAKN 171
Query: 231 GYAVKSSLKAEDGVLYPLEKSFFFLPKPPTL 261
+ + S +A G LYPL K F F+ KP L
Sbjct: 172 EHGITCSYRAASGQLYPLNKYFLFVVKPVIL 202
>gi|401827029|ref|XP_003887607.1| nucleosome-binding factor SPN subunit POB3 [Encephalitozoon hellem
ATCC 50504]
gi|392998613|gb|AFM98626.1| nucleosome-binding factor SPN subunit POB3 [Encephalitozoon hellem
ATCC 50504]
Length = 423
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 149/319 (46%), Gaps = 36/319 (11%)
Query: 13 EVSLADV--------SQTQLQGKND-VILEFHVDDTTGANEKDSLMEISFHIPNSNTQFV 63
E+ +ADV Q L+ +N I E V+D D EIS + + +FV
Sbjct: 96 ELEIADVLCGELGINGQKALEFRNTKTIFEVPVEDIESV--VDIRNEISVSLKDVEIRFV 153
Query: 64 GDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 123
N + ++ S D + + EG+++ PRG++++ +LRL G +
Sbjct: 154 S--NKKAIEEIKEGCSSSVD------DEIFKMEGLSLSYPRGKFNLIFFRDYLRLVGSSY 205
Query: 124 DFKIQYSSVVRLFLLPKS--NQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELL 181
D KI Y SV +L++L K + V+ +DPPIR+GQT Y +IV+ F+ + E+
Sbjct: 206 DHKIYYKSVKQLYMLEKGYIRDEERYAVIYVDPPIRQGQTRYDYIVVSFDD---TECEVS 262
Query: 182 MSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAE 241
+E +L+ Y GL VF+ ++ L + TK F S ++ ++KA
Sbjct: 263 ADDE--------RLKKEYSGLYSSVFSEVMEALCVIRATKS-TFESRDGMRCLRCAIKAY 313
Query: 242 DGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRN 301
+G LYPLE FLPK L L+ EI VEF R FD+ L E + F
Sbjct: 314 EGQLYPLEDCMLFLPKAIRLGLN-EISLVEFSRINLSSMQAKTFDM--TLFCEGSYTFNG 370
Query: 302 IQRNEYHNLFDFISGKGLK 320
I ++E+ L + KG+K
Sbjct: 371 ISKDEFGMLEQYFHSKGVK 389
>gi|396081733|gb|AFN83348.1| nucleosome-binding factor SPN subunit POB3 [Encephalitozoon
romaleae SJ-2008]
Length = 424
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 117/231 (50%), Gaps = 17/231 (7%)
Query: 92 VVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKS--NQPHTFVV 149
+ EG+++ PRG++++ +LRL G + D K+ Y SV +L++L K +VV
Sbjct: 174 IFKMEGLSLAYPRGKFNLIFFRDYLRLVGSSYDHKVYYKSVRQLYILEKGYIRDEERYVV 233
Query: 150 VTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTT 209
+DPPIR+GQT Y +IV F+ + E+ ++E +L+ Y GL E+FT
Sbjct: 234 ACVDPPIRQGQTRYDYIVASFDD---AEGEMNANDE--------RLKKEYSGLHSEIFTE 282
Query: 210 ILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDY 269
++ L K + F S ++ ++KA +G LYPLE FLPK L L+ EI
Sbjct: 283 VMETLCVIKAVRS-MFESRDGMRCLRCAIKAYEGQLYPLEDCVLFLPKAIRLGLN-EISL 340
Query: 270 VEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLK 320
VEF R FD+ L E + F + ++E+ L + KG+K
Sbjct: 341 VEFSRINLSSMQAKTFDM--TLFCEGSYTFNGLSKDEFGMLEQYFHSKGVK 389
>gi|303389977|ref|XP_003073220.1| nucleosome-binding factor SPN subunit POB3 [Encephalitozoon
intestinalis ATCC 50506]
gi|303302365|gb|ADM11860.1| nucleosome-binding factor SPN subunit POB3 [Encephalitozoon
intestinalis ATCC 50506]
Length = 423
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 142/303 (46%), Gaps = 28/303 (9%)
Query: 21 QTQLQGKND-VILEFHVDDTTGANEKDSLMEISFHIPNSNTQFVGDENHPPAQVFRDKIM 79
Q L+ +N ILE V+D D E+S + + +F+ N + ++
Sbjct: 112 QRALEFRNTKTILEIPVEDIESV--VDIKNELSVSLKDVEIRFIS--NKKTIEGVKEGCS 167
Query: 80 SMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLP 139
S D + + EG++ PRG++++ +LRL G + D KI Y S+ +L++L
Sbjct: 168 SSVD------DEIFKMEGLSFAYPRGKFNLIFFRDYLRLVGSSYDHKIYYKSIKQLYVLE 221
Query: 140 KS--NQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEP 197
K + VV +DPPIR+GQT Y IV+ F+ + E+ S+E +L+
Sbjct: 222 KGYIRDEDKYAVVCVDPPIRQGQTKYDCIVVSFDDS---EGEISASDE--------RLKE 270
Query: 198 SYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPK 257
Y GL E+F+ ++ L K + F S ++ ++KA +G LYPLE FLPK
Sbjct: 271 EYSGLFSEIFSEVMEALCVTKSVRSA-FESRDGMRCLRCAMKAYEGQLYPLEDCVLFLPK 329
Query: 258 PPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGK 317
L L EI VEF R FD+ L E + F + ++E+ L + K
Sbjct: 330 AVKLDLS-EISLVEFSRINLSSMQAKTFDM--TLFCEGPYAFSGLSKDEFGLLEQYFHSK 386
Query: 318 GLK 320
G+K
Sbjct: 387 GIK 389
>gi|402470845|gb|EJW04882.1| hypothetical protein EDEG_00102 [Edhazardia aedis USNM 41457]
Length = 455
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 154/324 (47%), Gaps = 30/324 (9%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
L F +K F++ L ++ KN++ L F A + +S++E+ F N N
Sbjct: 118 FLEFKNKEKLIFDIFLQEIKNVH-SMKNELTLSF-------AEKNNSVIEVKFINENPN- 168
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
D+I G E +VTFE + + PRG+ + + ++ G
Sbjct: 169 -------------LIDEIKERLQKSGGLNEEIVTFETLQSVVPRGKNDYIFYTNLFKMVG 215
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSEL 180
+ K+ YSS+ +F+L K + F + +DPPIR+GQT Y +VL F + + L
Sbjct: 216 STYEHKVLYSSIKNVFMLEK-DLNEVFAAIHIDPPIRQGQTRYNFVVLIFNKEELEDFSL 274
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAK--ITKPGKFRS-AQDGYAVKSS 237
++EE N +L+ +Y G ++E F +L + K I + +FR+ + + ++K S
Sbjct: 275 KLTEE--NKLKYPQLKETYSGPVYETFIDVLCHVVSPKTNIIRSTEFRTLSTNKGSLKCS 332
Query: 238 LKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEH 297
LKA DG LYPLE FLPK + L +EI VEF R FD+ + ++ +
Sbjct: 333 LKAFDGHLYPLENCLLFLPKAIYMPL-KEIILVEFSRINVSSFAAKTFDMKVT-TVDKSY 390
Query: 298 LFRNIQRNEYHNLFDFISGKGLKI 321
+F I + ++ L + K +K+
Sbjct: 391 MFNTIAKEDFGPLEQYFGSKKVKV 414
>gi|74195932|dbj|BAE30524.1| unnamed protein product [Mus musculus]
Length = 257
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 91/150 (60%), Gaps = 10/150 (6%)
Query: 1 MLTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNT 60
+L+F +G + FE+ L++VSQ GKN+V LEFH +D + + SLME+ F++P +
Sbjct: 118 LLSFDIGDQPVFEIPLSNVSQCT-TGKNEVTLEFHQND----DAEVSLMEVRFYVPPTQ- 171
Query: 61 QFVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQG 120
++ P + F ++S ADV +A+ F + LTPRGRY + ++ +FL L G
Sbjct: 172 ----EDGVDPVEAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHG 227
Query: 121 QANDFKIQYSSVVRLFLLPKSNQPHTFVVV 150
+ D+KI Y++V+RLFLLP +Q F V+
Sbjct: 228 KTFDYKIPYTTVLRLFLLPHKDQRQMFFVI 257
>gi|296418046|ref|XP_002838655.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634611|emb|CAZ82846.1| unnamed protein product [Tuber melanosporum]
Length = 103
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 63/76 (82%)
Query: 433 KKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYES 492
+KKKDPNAPKR +S ++FF+ +REN++ NPGIAF VG+VLGERWK +S ++R+PYE+
Sbjct: 15 QKKKDPNAPKRGLSAYMFFANEQRENVRNDNPGIAFGQVGKVLGERWKALSEKQRQPYEA 74
Query: 493 KARADKKRYKDEISGY 508
KA ADKKRY+DE + Y
Sbjct: 75 KAAADKKRYEDEKAAY 90
>gi|378755342|gb|EHY65369.1| hypothetical protein NERG_01815 [Nematocida sp. 1 ERTm2]
Length = 489
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 155/312 (49%), Gaps = 31/312 (9%)
Query: 92 VVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQP----HTF 147
+ + + + + PRG+Y + L + L G+ +IQ++++ R+F L +S + ++
Sbjct: 189 IFSIDEVTSILPRGKYKITLTAGGMHLIGKRYSHQIQFNAISRMFYLERSTEEGVDEMSY 248
Query: 148 VVVTLDPPIRKGQTLYPHIVLQFE---------TDYVVQSELLMSEELLNTKYKDKLE-- 196
++ L P+R+GQT Y + L + V+QS +E ++ + K ++E
Sbjct: 249 LIFELSTPVRQGQTRYHFVNLLISEEKVKMVVGKNTVIQSPEEEAELPIDEEEKKRIEDA 308
Query: 197 -PSY--KGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFF 253
SY +G + E ++ LSG G F + G A++ SLKA +G LYPL+K F
Sbjct: 309 GISYVQEGSLSECVVNMVEKLSGIAAMHTGSFSMSTGGKALRCSLKANEGYLYPLKKGFL 368
Query: 254 FLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDF 313
F+P+ I ++ I VEF R FD+ + +K ++E++F IQ+ EY+ L +
Sbjct: 369 FVPQ-IVYIEYDLIKTVEFSRVNLSSRTAKTFDVRVIMKDKKEYMFNGIQKVEYNALETY 427
Query: 314 ISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDESDEEDSDFVADKD 373
++ K + +N ++ AA ED+D+ E + GD S+E D +++
Sbjct: 428 LAKKEINCLN--EVLNEVWAAAPSDEDEDE------ETASDTTSGDLSEETDE---TEQN 476
Query: 374 DGGSPTDDSGEE 385
+ P ++SG E
Sbjct: 477 ESAVP-EESGSE 487
>gi|367020358|ref|XP_003659464.1| hypothetical protein MYCTH_2296547 [Myceliophthora thermophila ATCC
42464]
gi|347006731|gb|AEO54219.1| hypothetical protein MYCTH_2296547 [Myceliophthora thermophila ATCC
42464]
Length = 101
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 66/82 (80%)
Query: 427 GKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEE 486
GK +K++ KKDPNAPKR +S ++FF+ +REN+++ NPG++F VG++LGERWK +S ++
Sbjct: 10 GKAEKKRSKKDPNAPKRGLSAYMFFANEQRENVREENPGVSFGQVGKILGERWKALSDKQ 69
Query: 487 REPYESKARADKKRYKDEISGY 508
R PYE+KA ADKKRY+DE Y
Sbjct: 70 RAPYEAKAAADKKRYEDEKQAY 91
>gi|226287339|gb|EEH42852.1| FACT complex subunit POB3 [Paracoccidioides brasiliensis Pb18]
Length = 572
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 90/166 (54%), Gaps = 4/166 (2%)
Query: 181 LMSEELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGK-FRSAQDGYAVKSSLK 239
L ELL T+YKDKLE Y+ IH+V T + RGLSG K+ P + F S VK S+K
Sbjct: 329 LTPSELLQTRYKDKLEAHYEEPIHQVVTKVFRGLSGKKVVMPSRDFVSHHGHSGVKCSIK 388
Query: 240 AEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQ-EHL 298
A +G+L+ L+KSF F+PKP T + E I + R S FD+ + LK EH
Sbjct: 389 ANEGLLFCLDKSFMFVPKPATYVQIENISVITMSRVGGAISASRTFDITMTLKGGMGEHQ 448
Query: 299 FRNIQRNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDA 344
F NI R E L +F K ++ N ++ +AA L D++DA
Sbjct: 449 FSNINREEQQPLEEFFKAKNIRFKNEMADDSSALIAAAL--DNEDA 492
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 35/137 (25%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEF-----HVDDTTGANE------------ 44
LTF V + AFE+ +++S T L GKN+V +EF V+ T G +E
Sbjct: 195 LTFNVQNRPAFELPYSEISNTNLAGKNEVAVEFALPVDAVNGTNGQSEGSTKNRGRKAGA 254
Query: 45 -KDSLMEISFHIPNS-----------------NTQFVGDENHPPAQVFRDKIMSMADVGA 86
+D L+E+ F+IP + + Q E A +F + +M A++G
Sbjct: 255 GRDELVEMRFYIPGTALKKEKPEGEEGEGDEKSVQGEEAEEQNAANLFYETLMDKAEIGD 314
Query: 87 GGEEAVVTFEGIAILTP 103
+ TF + LTP
Sbjct: 315 VAGDTFATFLDVLHLTP 331
>gi|74628491|sp|Q7S045.1|NHP6_NEUCR RecName: Full=Non-histone chromosomal protein 6
gi|336464617|gb|EGO52857.1| Non-histone chromosomal protein 6 [Neurospora tetrasperma FGSC
2508]
gi|350296712|gb|EGZ77689.1| Non-histone chromosomal protein 6 [Neurospora tetrasperma FGSC
2509]
Length = 103
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 66/82 (80%)
Query: 427 GKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEE 486
GK +K++ KKDPNAPKR +S ++FF+ +REN+++ NPG++F VG++LGERWK +S ++
Sbjct: 12 GKVEKRRAKKDPNAPKRGLSAYMFFANEQRENVREENPGVSFGQVGKILGERWKALSDKQ 71
Query: 487 REPYESKARADKKRYKDEISGY 508
R PYE+KA ADKKRY+DE Y
Sbjct: 72 RAPYEAKAAADKKRYEDEKQAY 93
>gi|336272321|ref|XP_003350917.1| hypothetical protein SMAC_04223 [Sordaria macrospora k-hell]
gi|380090684|emb|CCC04854.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 103
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 65/82 (79%)
Query: 427 GKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEE 486
GK +K++ KKDPNAPKR +S ++FF+ +REN+++ NPG+ F VG++LGERWK +S ++
Sbjct: 12 GKVEKRRAKKDPNAPKRGLSAYMFFANEQRENVREENPGVTFGQVGKILGERWKALSDKQ 71
Query: 487 REPYESKARADKKRYKDEISGY 508
R PYE+KA ADKKRY+DE Y
Sbjct: 72 RAPYEAKAAADKKRYEDEKQAY 93
>gi|154284354|ref|XP_001542972.1| nucleosome binding protein [Ajellomyces capsulatus NAm1]
gi|150406613|gb|EDN02154.1| nucleosome binding protein [Ajellomyces capsulatus NAm1]
gi|240273630|gb|EER37150.1| nucleosome binding protein [Ajellomyces capsulatus H143]
gi|325087527|gb|EGC40837.1| nucleosome binding protein [Ajellomyces capsulatus H88]
Length = 102
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 64/77 (83%)
Query: 432 QKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYE 491
+KKKKDPNAPKR +S ++FF+ +REN+++ NPGI+F VG+VLGERWK ++ ++R PYE
Sbjct: 16 EKKKKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKVLGERWKALNEKQRAPYE 75
Query: 492 SKARADKKRYKDEISGY 508
+KA ADKKRY+DE + Y
Sbjct: 76 AKAAADKKRYEDEKASY 92
>gi|164422576|ref|XP_957906.2| hypothetical protein NCU09995 [Neurospora crassa OR74A]
gi|157069727|gb|EAA28670.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 95
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 66/82 (80%)
Query: 427 GKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEE 486
GK +K++ KKDPNAPKR +S ++FF+ +REN+++ NPG++F VG++LGERWK +S ++
Sbjct: 12 GKVEKRRAKKDPNAPKRGLSAYMFFANEQRENVREENPGVSFGQVGKILGERWKALSDKQ 71
Query: 487 REPYESKARADKKRYKDEISGY 508
R PYE+KA ADKKRY+DE Y
Sbjct: 72 RAPYEAKAAADKKRYEDEKQAY 93
>gi|225556517|gb|EEH04805.1| non-histone chromosomal protein 6 [Ajellomyces capsulatus G186AR]
Length = 102
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 64/77 (83%)
Query: 432 QKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYE 491
+KKKKDPNAPKR +S ++FF+ +REN+++ NPGI+F VG+VLGERWK ++ ++R PYE
Sbjct: 16 EKKKKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKVLGERWKALNEKQRAPYE 75
Query: 492 SKARADKKRYKDEISGY 508
+KA ADKKRY+DE + Y
Sbjct: 76 AKAAADKKRYEDEKASY 92
>gi|367043490|ref|XP_003652125.1| hypothetical protein THITE_126111 [Thielavia terrestris NRRL 8126]
gi|346999387|gb|AEO65789.1| hypothetical protein THITE_126111 [Thielavia terrestris NRRL 8126]
Length = 103
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 66/82 (80%)
Query: 427 GKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEE 486
GK +K++ KKDPNAPKR +S ++FF+ +REN+++ NPG++F VG++LGERWK +S ++
Sbjct: 10 GKVEKRRGKKDPNAPKRGLSAYMFFANEQRENVREENPGVSFGQVGKILGERWKALSDKQ 69
Query: 487 REPYESKARADKKRYKDEISGY 508
R PYE+KA ADKKRY+DE Y
Sbjct: 70 RAPYEAKAAADKKRYEDEKQAY 91
>gi|119187239|ref|XP_001244226.1| hypothetical protein CIMG_03667 [Coccidioides immitis RS]
gi|303317166|ref|XP_003068585.1| Nonhistone chromosomal protein 6B, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240108266|gb|EER26440.1| Nonhistone chromosomal protein 6B, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320038503|gb|EFW20438.1| nucleosome binding protein Nhp6a [Coccidioides posadasii str.
Silveira]
gi|392870942|gb|EAS32789.2| non-histone chromosomal protein 6 [Coccidioides immitis RS]
Length = 102
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 65/80 (81%)
Query: 429 KKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEERE 488
++ +KKKKDPNAPKR +S ++FF+ +REN+++ NPGI+F VG++LGERWK +S ++R
Sbjct: 13 RRAEKKKKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKLLGERWKALSDKQRA 72
Query: 489 PYESKARADKKRYKDEISGY 508
PYE KA ADKKRY+DE + Y
Sbjct: 73 PYEEKAAADKKRYEDEKANY 92
>gi|302411796|ref|XP_003003731.1| nucleosome binding protein [Verticillium albo-atrum VaMs.102]
gi|261357636|gb|EEY20064.1| nucleosome binding protein [Verticillium albo-atrum VaMs.102]
gi|346978438|gb|EGY21890.1| nucleosome binding protein [Verticillium dahliae VdLs.17]
Length = 102
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 67/82 (81%)
Query: 427 GKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEE 486
G+KK ++ KKDPNAPKR +S ++FF+ +REN+++ NPGI+F VG++LGERWK ++ ++
Sbjct: 11 GEKKAKRAKKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKLLGERWKALNEKQ 70
Query: 487 REPYESKARADKKRYKDEISGY 508
R PYE+KA ADKKRY+DE + Y
Sbjct: 71 RGPYEAKAVADKKRYEDEKAAY 92
>gi|358379174|gb|EHK16855.1| hypothetical protein TRIVIDRAFT_217092 [Trichoderma virens Gv29-8]
Length = 102
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 72/97 (74%), Gaps = 6/97 (6%)
Query: 412 KASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDV 471
K + SK+ ++DG K++ KKDPNAPKR +S ++FF+ +REN+++ NPGI+F V
Sbjct: 3 KVAASKRGAKDGG------KKRTKKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQV 56
Query: 472 GRVLGERWKKMSVEEREPYESKARADKKRYKDEISGY 508
G++LGERWK ++ ++R PYE+KA ADKKRY+DE Y
Sbjct: 57 GKLLGERWKALNDKQRAPYEAKAAADKKRYEDEKQAY 93
>gi|116206850|ref|XP_001229234.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88183315|gb|EAQ90783.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 96
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 69/90 (76%), Gaps = 3/90 (3%)
Query: 419 KSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGER 478
KSR G + KK ++KKDPNAPKR +S ++FF+ +R+N+++ NPG++F VG++LGER
Sbjct: 6 KSRSGKAE---KKTRQKKDPNAPKRGLSAYMFFANEQRDNVREENPGVSFGQVGKILGER 62
Query: 479 WKKMSVEEREPYESKARADKKRYKDEISGY 508
WK +S ++R PYE+KA ADKKRY+DE Y
Sbjct: 63 WKALSDKQRAPYEAKAAADKKRYEDEKQAY 92
>gi|71028242|ref|XP_763764.1| structure specific recognition protein [Theileria parva strain
Muguga]
gi|68350718|gb|EAN31481.1| structure specific recognition protein, putative [Theileria parva]
Length = 460
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 137/316 (43%), Gaps = 45/316 (14%)
Query: 6 VGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFVGD 65
+ ++ + Q + K D+ +E + + N D L+EI F +PN + +
Sbjct: 147 INNNSGLDIDAQSIIQATIPSKTDLAIE--LKNVNTLNNSDELVEIRFCLPN---KLDPE 201
Query: 66 ENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDF 125
+N + + + + + E + I ++ PRGRY +E
Sbjct: 202 DNEIQLEDLKQTFLVKSGLDEMKSEKIALLMDIPLIVPRGRYEIE--------------- 246
Query: 126 KIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEE 185
F L +R+GQT Y +IV+QFE+D+ + +L + E+
Sbjct: 247 ---------------------FTKRRLSQSMRQGQTRYAYIVMQFESDHETKVDLNLQEQ 285
Query: 186 LLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVL 245
L + KL+ +G + V + + L I PG F+S + A+ + KA G L
Sbjct: 286 DLK---QYKLDKVLEGKTYNVVSRLFGSLVNRSIVVPGDFKSEKGDSAISCTYKATSGHL 342
Query: 246 YPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRN 305
+PL +S F+ KP I E+I VEF R A N +F +L+ ++ E+ F NI +
Sbjct: 343 FPLNRSLLFIVKPVIFIRFEDIVSVEFSRTGATTQN-RFFAILVSMRGNIEYEFTNIDKT 401
Query: 306 EYHNLFDFISGKGLKI 321
E+ L +++ K +++
Sbjct: 402 EFKYLNEYLLSKDIRV 417
>gi|429860623|gb|ELA35353.1| nucleosome binding protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 103
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 66/82 (80%)
Query: 427 GKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEE 486
GK +K++ KKDPNAPKR +S ++FF+ +REN+++ NPGI+F VG++LGERWK ++ ++
Sbjct: 12 GKVEKKRGKKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKILGERWKALNDKQ 71
Query: 487 REPYESKARADKKRYKDEISGY 508
R PYE+KA ADKKRY+DE Y
Sbjct: 72 RAPYEAKAAADKKRYEDEKQAY 93
>gi|302926833|ref|XP_003054372.1| HMG box-containing protein [Nectria haematococca mpVI 77-13-4]
gi|256735313|gb|EEU48659.1| HMG box-containing protein [Nectria haematococca mpVI 77-13-4]
Length = 101
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 67/87 (77%)
Query: 422 DGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKK 481
D + GK K++ KKDPNAPKR +S ++FF+ +REN+++ NPGI+F VG++LGERWK
Sbjct: 5 DAGKRGKAVKKRGKKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKLLGERWKA 64
Query: 482 MSVEEREPYESKARADKKRYKDEISGY 508
++ ++R PYE+KA ADKKRY+DE Y
Sbjct: 65 LNEKQRAPYEAKAAADKKRYEDEKQAY 91
>gi|440631791|gb|ELR01710.1| non-histone chromosomal protein 6 [Geomyces destructans 20631-21]
Length = 101
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 65/77 (84%)
Query: 432 QKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYE 491
+KKKKDPNAPKR +S ++FF+Q +R+N+++ NPGI+F VG+VLGERWK ++ ++R PYE
Sbjct: 16 EKKKKDPNAPKRGLSAYMFFAQEQRDNVREENPGISFGQVGKVLGERWKALNDKQRTPYE 75
Query: 492 SKARADKKRYKDEISGY 508
+KA+ DKKRY+DE + Y
Sbjct: 76 TKAQEDKKRYEDEKASY 92
>gi|295671102|ref|XP_002796098.1| nucleosome binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284231|gb|EEH39797.1| nucleosome binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 103
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 64/77 (83%)
Query: 432 QKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYE 491
+KKKKDPNAPKR +S ++FF+ +R+N+++ NPGI+F VG+VLGERWK ++ ++R PYE
Sbjct: 17 EKKKKDPNAPKRGLSAYMFFANEQRDNVREENPGISFGQVGKVLGERWKALNEKQRAPYE 76
Query: 492 SKARADKKRYKDEISGY 508
+KA ADKKRY+DE + Y
Sbjct: 77 AKAAADKKRYEDEKASY 93
>gi|261194046|ref|XP_002623428.1| nucleosome binding protein [Ajellomyces dermatitidis SLH14081]
gi|239588442|gb|EEQ71085.1| nucleosome binding protein [Ajellomyces dermatitidis SLH14081]
gi|327354542|gb|EGE83399.1| nonhistone chromosomal protein 6A [Ajellomyces dermatitidis ATCC
18188]
Length = 101
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 64/77 (83%)
Query: 432 QKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYE 491
+KKKKDPNAPKR +S ++FF+ +R+N+++ NPGI+F VG+VLGERWK ++ ++R PYE
Sbjct: 15 EKKKKDPNAPKRGLSAYMFFANEQRDNVREENPGISFGQVGKVLGERWKALNEKQRAPYE 74
Query: 492 SKARADKKRYKDEISGY 508
+KA ADKKRY+DE + Y
Sbjct: 75 AKAAADKKRYEDEKASY 91
>gi|225681708|gb|EEH19992.1| nucleosome binding protein [Paracoccidioides brasiliensis Pb03]
Length = 103
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 64/77 (83%)
Query: 432 QKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYE 491
+KKKKDPNAPKR +S ++FF+ +R+N+++ NPGI+F VG+VLGERWK ++ ++R PYE
Sbjct: 17 EKKKKDPNAPKRGLSAYMFFANEQRDNVREENPGISFGQVGKVLGERWKALNEKQRAPYE 76
Query: 492 SKARADKKRYKDEISGY 508
+KA ADKKRY+DE + Y
Sbjct: 77 AKAAADKKRYEDEKASY 93
>gi|239606992|gb|EEQ83979.1| nucleosome binding protein [Ajellomyces dermatitidis ER-3]
Length = 105
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 64/77 (83%)
Query: 432 QKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYE 491
+KKKKDPNAPKR +S ++FF+ +R+N+++ NPGI+F VG+VLGERWK ++ ++R PYE
Sbjct: 15 EKKKKDPNAPKRGLSAYMFFANEQRDNVREENPGISFGQVGKVLGERWKALNEKQRAPYE 74
Query: 492 SKARADKKRYKDEISGY 508
+KA ADKKRY+DE + Y
Sbjct: 75 AKAAADKKRYEDEKASY 91
>gi|400599237|gb|EJP66941.1| HMG box protein [Beauveria bassiana ARSEF 2860]
Length = 96
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 64/78 (82%)
Query: 431 KQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPY 490
K++ KKDPNAPKR +S ++FF+ +REN+++ NPG++F VG++LGERWK +S ++R PY
Sbjct: 16 KKRAKKDPNAPKRGLSAYMFFANEQRENVREENPGVSFGQVGKILGERWKALSDKQRTPY 75
Query: 491 ESKARADKKRYKDEISGY 508
E+KA ADKKRY+DE + Y
Sbjct: 76 EAKAAADKKRYEDEKAAY 93
>gi|358391632|gb|EHK41036.1| hypothetical protein TRIATDRAFT_259074 [Trichoderma atroviride IMI
206040]
Length = 101
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 67/90 (74%)
Query: 419 KSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGER 478
K+ G K K++ KKDPNAPKR +S ++FF+ +REN+++ NPGI+F VG++LGER
Sbjct: 3 KAASGKRGAKDTKKRAKKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKLLGER 62
Query: 479 WKKMSVEEREPYESKARADKKRYKDEISGY 508
WK ++ ++R PYE+KA ADKKRY+DE Y
Sbjct: 63 WKALNDKQRAPYEAKAAADKKRYEDEKQAY 92
>gi|378727181|gb|EHY53640.1| non-histone chromosomal protein 6 [Exophiala dermatitidis
NIH/UT8656]
Length = 102
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 66/78 (84%)
Query: 432 QKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYE 491
+KKKKDPNAPKR +S ++FF+ +RE++++ NPGI+F VG+VLG+RWK ++ ++REPYE
Sbjct: 15 EKKKKDPNAPKRGLSAYMFFANEQRESVREENPGISFGQVGKVLGDRWKALNEKQREPYE 74
Query: 492 SKARADKKRYKDEISGYK 509
KA+ADKKRY+DE + Y+
Sbjct: 75 KKAQADKKRYEDEKAKYQ 92
>gi|380476672|emb|CCF44585.1| non-histone chromosomal protein 6 [Colletotrichum higginsianum]
Length = 96
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 65/82 (79%)
Query: 427 GKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEE 486
GK K++ KKDPNAPKR +S ++FF+ +REN+++ NPGI+F VG++LGERWK ++ ++
Sbjct: 12 GKVDKKRAKKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKILGERWKALNEKQ 71
Query: 487 REPYESKARADKKRYKDEISGY 508
R+PYE+KA DKKRY+DE Y
Sbjct: 72 RQPYEAKAATDKKRYEDEKQAY 93
>gi|429964514|gb|ELA46512.1| hypothetical protein VCUG_02004 [Vavraia culicis 'floridensis']
Length = 442
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 153/313 (48%), Gaps = 28/313 (8%)
Query: 9 KQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFVGDENH 68
K F+VSL D+ KN+ +L F D E D ++E+ +P DEN
Sbjct: 125 KLIFDVSLKDIVSV-CSVKNEAVLGFDCD-----KEFDGVIEMRLGVP--------DENF 170
Query: 69 PPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQ 128
R +I G ++++ FE + ++PRG+ +++R+ G+ + K+
Sbjct: 171 VKNLRERSEI--------GQVKSIIAFETLNNVSPRGKSDYIFSENYIRVLGRTYEHKVL 222
Query: 129 YSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLN 188
YSS+ R+ +L + + +++ +DP I++GQT Y I L FE V E+ + ++L
Sbjct: 223 YSSIKRIVVLEQEKVVN--IIINVDPSIKQGQTRYNFINLLFEKGIVEDFEVELDDDL-R 279
Query: 189 TKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPL 248
+KY L+ Y G +HE F I+ + K+ F++ + + +L+A +G+L+P+
Sbjct: 280 SKYP-TLKEKYTGELHETFIEIIELFTRQKVQVSEGFKTKANQIFLSCALRALEGLLFPI 338
Query: 249 EKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYH 308
+ FLPK + H EI VEF R FD+ I + + +LF +I ++E+
Sbjct: 339 ADAVIFLPK-VIYMPHREIRLVEFYRVDVSVMTSKSFDMKI-ITYDTAYLFSSIDKDEFG 396
Query: 309 NLFDFISGKGLKI 321
L + S ++I
Sbjct: 397 ALEKYFSDCNVEI 409
>gi|320585897|gb|EFW98576.1| nucleosome-binding protein [Grosmannia clavigera kw1407]
Length = 94
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 71/98 (72%), Gaps = 7/98 (7%)
Query: 411 VKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTD 470
VKA+T K GK +K++ KKDPNAPKR +S ++FF+ +REN++ NPGI+F
Sbjct: 2 VKAATKVK-------TGKVEKRRSKKDPNAPKRGLSAYMFFANEQRENVRDENPGISFGQ 54
Query: 471 VGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGY 508
VG++LGERWK ++ ++R PYE+KA ADKKRY+D + Y
Sbjct: 55 VGKILGERWKALNEKQRTPYEAKAAADKKRYEDAKAAY 92
>gi|406862701|gb|EKD15750.1| nucleosome binding protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 102
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 62/77 (80%)
Query: 432 QKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYE 491
+KKKKDPNAPKR +S ++FF+ +REN+++ NPGI F VG+VLGERWK ++ ++R PYE
Sbjct: 16 EKKKKDPNAPKRGLSAYMFFANEQRENVREENPGITFGQVGKVLGERWKALNDKQRTPYE 75
Query: 492 SKARADKKRYKDEISGY 508
+KA DKKRY+DE + Y
Sbjct: 76 AKAAQDKKRYEDEKASY 92
>gi|310793467|gb|EFQ28928.1| HMG box protein [Glomerella graminicola M1.001]
Length = 103
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 64/82 (78%)
Query: 427 GKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEE 486
GK K++ KKDPNAPKR +S ++FF+ +REN+++ NPGI+F VG++LGERWK ++ ++
Sbjct: 12 GKVDKKRAKKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKILGERWKALNDKQ 71
Query: 487 REPYESKARADKKRYKDEISGY 508
R PYE+KA DKKRY+DE Y
Sbjct: 72 RAPYEAKAATDKKRYEDEKQAY 93
>gi|171680363|ref|XP_001905127.1| hypothetical protein [Podospora anserina S mat+]
gi|170939808|emb|CAP65034.1| unnamed protein product [Podospora anserina S mat+]
Length = 98
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 64/81 (79%)
Query: 428 KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEER 487
K K+ + KKDPNAPKR +S ++FF+ +REN+++ NPG++F VG++LGERWK +S ++R
Sbjct: 13 KVKRGRGKKDPNAPKRGLSAYMFFANEQRENVREENPGVSFGQVGKILGERWKALSDKQR 72
Query: 488 EPYESKARADKKRYKDEISGY 508
PYE+KA ADKKRY+DE Y
Sbjct: 73 APYEAKAAADKKRYEDEKQAY 93
>gi|342874398|gb|EGU76412.1| hypothetical protein FOXB_13090 [Fusarium oxysporum Fo5176]
Length = 102
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 66/83 (79%), Gaps = 1/83 (1%)
Query: 427 GKKKKQKK-KKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVE 485
GK +K K+ KKDPNAPKR +S ++FF+ +REN+++ NPGI+F VG++LGERWK ++ +
Sbjct: 10 GKAEKTKRGKKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKLLGERWKALNEK 69
Query: 486 EREPYESKARADKKRYKDEISGY 508
+R PYE+KA ADKKRY+DE Y
Sbjct: 70 QRAPYEAKAAADKKRYEDEKQAY 92
>gi|346324407|gb|EGX94004.1| nucleosome binding protein [Cordyceps militaris CM01]
Length = 96
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 64/78 (82%)
Query: 431 KQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPY 490
K++ KKDPNAPKR +S ++FF+ +R+N+++ NPG++F VG++LGERWK +S ++R PY
Sbjct: 16 KKRAKKDPNAPKRGLSAYMFFANEQRDNVREENPGVSFGQVGKILGERWKALSEKQRVPY 75
Query: 491 ESKARADKKRYKDEISGY 508
E+KA ADKKRY+DE + Y
Sbjct: 76 EAKAAADKKRYEDEKAAY 93
>gi|46105649|ref|XP_380561.1| hypothetical protein FG00385.1 [Gibberella zeae PH-1]
gi|110287687|sp|Q4IQX3.1|NHP6_GIBZE RecName: Full=Non-histone chromosomal protein 6
gi|408400690|gb|EKJ79767.1| hypothetical protein FPSE_00047 [Fusarium pseudograminearum CS3096]
Length = 101
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 62/77 (80%)
Query: 432 QKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYE 491
++ KKDPNAPKR +S ++FF+ +REN+++ NPGI+F VG++LGERWK ++ ++R PYE
Sbjct: 15 KRAKKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKLLGERWKALNEKQRAPYE 74
Query: 492 SKARADKKRYKDEISGY 508
+KA ADKKRY+DE Y
Sbjct: 75 AKAAADKKRYEDEKQAY 91
>gi|341888649|gb|EGT44584.1| hypothetical protein CAEBREN_28220 [Caenorhabditis brenneri]
Length = 292
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 94/160 (58%), Gaps = 10/160 (6%)
Query: 12 FEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFVGDENHP-P 70
FE+ +VSQ + KN+ +LEFH ++ N + SLME+ FH+P DE+
Sbjct: 128 FEIPCTNVSQC-VANKNEAVLEFHQNE----NSQVSLMEMRFHMPVDP----DDEDEIDK 178
Query: 71 AQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYS 130
+ F+ +++ A + A E+ + I TPRGRY ++++ + + L G+ D+KI
Sbjct: 179 VEEFKKAVLAYAGLEAETEQPITLLSDILCTTPRGRYEIKVYPTSIALHGKTYDYKIPVK 238
Query: 131 SVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQF 170
++ RLFL+P + H + V++L+PPIR+GQT Y ++V +F
Sbjct: 239 TINRLFLVPHKDGRHVYFVLSLNPPIRQGQTRYSYLVFEF 278
>gi|410081503|ref|XP_003958331.1| hypothetical protein KAFR_0G01620 [Kazachstania africana CBS 2517]
gi|372464919|emb|CCF59196.1| hypothetical protein KAFR_0G01620 [Kazachstania africana CBS 2517]
Length = 95
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 63/83 (75%)
Query: 426 DGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVE 485
D KK+ Q++KKDPNAPKRA+S ++FF+ R+ ++ NP + F +GR+LGERWK ++ E
Sbjct: 6 DTKKRTQRRKKDPNAPKRALSAYMFFANENRDIVRSENPDVTFGQIGRILGERWKALNAE 65
Query: 486 EREPYESKARADKKRYKDEISGY 508
++EPYE+KA ADKKRY+ E Y
Sbjct: 66 DKEPYEAKAAADKKRYESEKELY 88
>gi|70999478|ref|XP_754458.1| nucleosome binding protein (Nhp6a) [Aspergillus fumigatus Af293]
gi|74674416|sp|Q4WY33.1|NHP6_ASPFU RecName: Full=Non-histone chromosomal protein 6
gi|66852095|gb|EAL92420.1| nucleosome binding protein (Nhp6a), putative [Aspergillus fumigatus
Af293]
gi|159127475|gb|EDP52590.1| nucleosome binding protein (Nhp6a), putative [Aspergillus fumigatus
A1163]
Length = 104
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 62/80 (77%)
Query: 429 KKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEERE 488
K+ ++KKKDPNAPKR +S ++FF+ R+ +++ NPGI+F VG++LGERWK +S ER
Sbjct: 13 KRVERKKKDPNAPKRGLSAYMFFANENRDKVREENPGISFGQVGKMLGERWKALSDSERR 72
Query: 489 PYESKARADKKRYKDEISGY 508
PYE KA ADKKRY+DE + Y
Sbjct: 73 PYEEKAAADKKRYEDEKASY 92
>gi|361127235|gb|EHK99210.1| putative Non-histone chromosomal protein 6 [Glarea lozoyensis
74030]
Length = 100
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 64/80 (80%)
Query: 429 KKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEERE 488
K+ +KKKKDPNAPKR +S ++FF+ +REN+++ NPGI+F VG+VLGERWK +S +R+
Sbjct: 11 KRTEKKKKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKVLGERWKALSDTQRK 70
Query: 489 PYESKARADKKRYKDEISGY 508
PY +KA ADK RY++E + Y
Sbjct: 71 PYAAKADADKIRYEEEKANY 90
>gi|366988547|ref|XP_003674040.1| hypothetical protein NCAS_0A11010 [Naumovozyma castellii CBS 4309]
gi|342299903|emb|CCC67659.1| hypothetical protein NCAS_0A11010 [Naumovozyma castellii CBS 4309]
Length = 101
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 63/83 (75%)
Query: 426 DGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVE 485
+ K++ Q++KKDPNAPKR +S ++FF+ R+ +K NP I F VG+VLGE+WK ++ E
Sbjct: 5 EAKRRTQRRKKDPNAPKRGLSAYMFFANENRDIVKAENPNITFGQVGKVLGEKWKALTAE 64
Query: 486 EREPYESKARADKKRYKDEISGY 508
E+EPYE+KA+ADKKRY+ E Y
Sbjct: 65 EKEPYEAKAKADKKRYESEKELY 87
>gi|345569047|gb|EGX51916.1| hypothetical protein AOL_s00043g650 [Arthrobotrys oligospora ATCC
24927]
Length = 105
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 58/73 (79%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR +S ++FF+ +REN++ NPGIAF VG+VLGERWK ++ +R+PYE KA+A
Sbjct: 21 DPNAPKRGLSAYMFFANEQRENVRAENPGIAFGQVGKVLGERWKALTTAQRKPYEDKAKA 80
Query: 497 DKKRYKDEISGYK 509
DK+RY+DE Y+
Sbjct: 81 DKQRYEDEKIAYQ 93
>gi|67524855|ref|XP_660489.1| hypothetical protein AN2885.2 [Aspergillus nidulans FGSC A4]
gi|74597086|sp|Q5B995.1|NHP6_EMENI RecName: Full=Non-histone chromosomal protein 6
gi|40744280|gb|EAA63456.1| hypothetical protein AN2885.2 [Aspergillus nidulans FGSC A4]
gi|259486178|tpe|CBF83812.1| TPA: Non-histone chromosomal protein 6
[Source:UniProtKB/Swiss-Prot;Acc:Q5B995] [Aspergillus
nidulans FGSC A4]
Length = 106
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 62/77 (80%)
Query: 433 KKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYES 492
+KKKDPNAPKR +S ++FF+ R+ +++ NPGI+F VG++LGE+WK +S +ER+PYE
Sbjct: 19 RKKKDPNAPKRGLSAYMFFANDNRDKVREENPGISFGQVGKMLGEKWKSLSDKERKPYED 78
Query: 493 KARADKKRYKDEISGYK 509
KA ADKKRY+DE + YK
Sbjct: 79 KAAADKKRYEDEKAAYK 95
>gi|50304233|ref|XP_452066.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74636989|sp|Q6CVH3.1|NHP6_KLULA RecName: Full=Non-histone chromosomal protein 6
gi|49641198|emb|CAH02459.1| KLLA0B12056p [Kluyveromyces lactis]
Length = 93
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 62/81 (76%)
Query: 428 KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEER 487
+KK Q+KKKDPNAPKRA+S ++FF+ R+ ++ NPGI F VGR+LGE+WK ++ +E+
Sbjct: 5 RKKTQRKKKDPNAPKRALSAYMFFANENRDIVRAENPGITFGQVGRILGEKWKALNEDEK 64
Query: 488 EPYESKARADKKRYKDEISGY 508
PYE+KA ADKKRY+ E Y
Sbjct: 65 APYEAKAEADKKRYESEKELY 85
>gi|402077455|gb|EJT72804.1| non-histone chromosomal protein 6 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 101
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 65/81 (80%)
Query: 428 KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEER 487
K +K++ KKDP APKR +S ++FF+ +REN+++ NPG++F VG++LGERWK +S ++R
Sbjct: 11 KTEKRRGKKDPLAPKRGLSAYMFFANEQRENVREENPGVSFGQVGKILGERWKALSDKQR 70
Query: 488 EPYESKARADKKRYKDEISGY 508
PY++KA ADKKRY+DE + Y
Sbjct: 71 APYDAKAAADKKRYEDEKAAY 91
>gi|119491564|ref|XP_001263303.1| nucleosome binding protein (Nhp6a), putative [Neosartorya fischeri
NRRL 181]
gi|119411463|gb|EAW21406.1| nucleosome binding protein (Nhp6a), putative [Neosartorya fischeri
NRRL 181]
Length = 104
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 62/80 (77%)
Query: 429 KKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEERE 488
K+ ++KKKDPNAPKR +S ++FF+ R+ +++ NPGI+F VG++LGERWK +S +R
Sbjct: 13 KRVERKKKDPNAPKRGLSAYMFFANENRDKVREENPGISFGQVGKMLGERWKALSDTDRR 72
Query: 489 PYESKARADKKRYKDEISGY 508
PYE KA ADKKRY+DE + Y
Sbjct: 73 PYEEKAAADKKRYEDEKASY 92
>gi|407926962|gb|EKG19868.1| High mobility group HMG1/HMG2 [Macrophomina phaseolina MS6]
Length = 106
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 69/97 (71%), Gaps = 5/97 (5%)
Query: 412 KASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDV 471
K T+ +K++ DGKKKK DPNAPKR +S ++FF+ R+ +++ NPGI F +V
Sbjct: 3 KEKTTSRKTKASKADGKKKK-----DPNAPKRGLSAYMFFANDMRDKVREENPGIKFGEV 57
Query: 472 GRVLGERWKKMSVEEREPYESKARADKKRYKDEISGY 508
G++LGERWK +S ++R PYE+KA DKKRY+DE + Y
Sbjct: 58 GKILGERWKALSEKQRAPYEAKAANDKKRYEDEKAAY 94
>gi|440493779|gb|ELQ76206.1| Nucleosome-binding factor SPN, POB3 subunit [Trachipleistophora
hominis]
Length = 451
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 145/302 (48%), Gaps = 28/302 (9%)
Query: 9 KQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFVGDENH 68
K F+V L DV KN+ +L F D E D ++E+ +P DEN
Sbjct: 134 KLIFDVPLKDVVSV-CSVKNEAVLGFDCD-----KEFDGVIEMRLSVP--------DENF 179
Query: 69 PPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQ 128
R +I G ++++TFE + ++PRG+ +++R+ G+ + K+
Sbjct: 180 VKNLRERSEI--------GQVKSIITFETLNNVSPRGKSDYIFSENYIRILGRTYEHKVL 231
Query: 129 YSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLN 188
YSS+ ++ +L + + +++ +DP I++GQT Y I L FE EL + +L
Sbjct: 232 YSSIKKIIVLEQEKVVN--IIINVDPSIKQGQTRYNFINLLFEKGIDEDFELELDSDL-R 288
Query: 189 TKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPL 248
+KY LE Y G ++E F I+ + ++ F++ + + +L+A +G L+P+
Sbjct: 289 SKYP-SLEEKYNGELYETFIKIIELFTKQRVQVSECFKTRTNQIFLSCALRALEGFLFPI 347
Query: 249 EKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYH 308
+ FLPK + H EI VEF R FD+ I + + +LF +I ++E+
Sbjct: 348 SDAVIFLPK-VIYMPHREIRLVEFYRVDVSVMTSKSFDMKI-ITYDSSYLFSSIDKDEFG 405
Query: 309 NL 310
L
Sbjct: 406 AL 407
>gi|340520749|gb|EGR50985.1| predicted protein [Trichoderma reesei QM6a]
Length = 83
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 59/73 (80%)
Query: 436 KDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKAR 495
+DPNAPKR +S ++FF+ +REN+++ NPGI+F VG++LGERWK ++ ++R PYE+KA
Sbjct: 2 QDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKLLGERWKALNDKQRAPYEAKAA 61
Query: 496 ADKKRYKDEISGY 508
ADKKRY+DE Y
Sbjct: 62 ADKKRYEDEKQAY 74
>gi|358372276|dbj|GAA88880.1| nucleosome binding protein (Nhp6a) [Aspergillus kawachii IFO 4308]
Length = 104
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 60/77 (77%)
Query: 432 QKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYE 491
+++KKDPNAPKR +S ++FF+ RE +++ NPGI+F VG++LGERWK +S +R PYE
Sbjct: 17 ERRKKDPNAPKRGLSAYMFFANDNREKVREENPGISFGQVGKMLGERWKALSDTDRRPYE 76
Query: 492 SKARADKKRYKDEISGY 508
KA ADKKRY+DE + Y
Sbjct: 77 EKAAADKKRYEDEKASY 93
>gi|121705796|ref|XP_001271161.1| nucleosome binding protein (Nhp6a), putative [Aspergillus clavatus
NRRL 1]
gi|119399307|gb|EAW09735.1| nucleosome binding protein (Nhp6a), putative [Aspergillus clavatus
NRRL 1]
Length = 104
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 61/80 (76%)
Query: 429 KKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEERE 488
K+ ++KKKDPNAPKR +S ++FF+ R+ +++ NPGI+F VG++LGERWK +S ER
Sbjct: 13 KRVERKKKDPNAPKRGLSAYMFFANDNRDKVREENPGISFGQVGKMLGERWKALSDSERR 72
Query: 489 PYESKARADKKRYKDEISGY 508
PYE KA DKKRY+DE + Y
Sbjct: 73 PYEEKAATDKKRYEDEKASY 92
>gi|340992807|gb|EGS23362.1| hypothetical protein CTHT_0010300 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 104
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 61/82 (74%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR +S ++FF+ +R+N+++ NPGI+F VG++LGERWK ++ ++R PYE+KA A
Sbjct: 21 DPNAPKRGLSAYMFFANEQRDNVREENPGISFGQVGKILGERWKALTDKQRAPYEAKAAA 80
Query: 497 DKKRYKDEISGYKNPKPMDIDS 518
DKKRY+DE Y D DS
Sbjct: 81 DKKRYEDEKQAYNAQADGDDDS 102
>gi|389626627|ref|XP_003710967.1| non-histone chromosomal protein 6 [Magnaporthe oryzae 70-15]
gi|78192124|gb|ABB30152.1| nonhistone protein 6 [Magnaporthe grisea]
gi|291195731|gb|ADD84582.1| nonhistone chromosomal protein 6B [Magnaporthe oryzae]
gi|351650496|gb|EHA58355.1| non-histone chromosomal protein 6 [Magnaporthe oryzae 70-15]
gi|440463464|gb|ELQ33044.1| nucleosome binding protein [Magnaporthe oryzae Y34]
gi|440481294|gb|ELQ61893.1| nucleosome binding protein [Magnaporthe oryzae P131]
Length = 101
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 65/83 (78%)
Query: 427 GKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEE 486
K +K++ KKDP APKR +S ++FF+ +R+N+++ NPG+ F VG++LGERWK +S ++
Sbjct: 10 AKPEKRRAKKDPMAPKRGLSAYMFFANEQRDNVREENPGVTFGQVGKILGERWKALSDKQ 69
Query: 487 REPYESKARADKKRYKDEISGYK 509
R PY++KA ADKKRY+DE + Y+
Sbjct: 70 RAPYDAKAAADKKRYEDEKAAYQ 92
>gi|145233003|ref|XP_001399874.1| non-histone chromosomal protein 6 [Aspergillus niger CBS 513.88]
gi|317026969|ref|XP_003188583.1| non-histone chromosomal protein 6 [Aspergillus niger CBS 513.88]
gi|134056796|emb|CAK37704.1| unnamed protein product [Aspergillus niger]
gi|350634700|gb|EHA23062.1| hypothetical protein ASPNIDRAFT_206990 [Aspergillus niger ATCC
1015]
Length = 103
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 60/77 (77%)
Query: 432 QKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYE 491
+++KKDPNAPKR +S ++FF+ RE +++ NPGI+F VG++LGERWK +S +R PYE
Sbjct: 16 ERRKKDPNAPKRGLSAYMFFANDNREKVREENPGISFGQVGKMLGERWKALSDTDRRPYE 75
Query: 492 SKARADKKRYKDEISGY 508
KA ADKKRY+DE + Y
Sbjct: 76 EKAAADKKRYEDEKASY 92
>gi|339046261|ref|NP_009647.2| Nhp6bp [Saccharomyces cerevisiae S288c]
gi|341942236|sp|P11633.3|NHP6B_YEAST RecName: Full=Non-histone chromosomal protein 6B
gi|4036|emb|CAA33378.1| unnamed protein product [Saccharomyces cerevisiae]
gi|45271022|gb|AAS56892.1| YBR089C-A [Saccharomyces cerevisiae]
gi|151946484|gb|EDN64706.1| nonhistone chromosomal protein [Saccharomyces cerevisiae YJM789]
gi|190408749|gb|EDV12014.1| 11 kDa nonhistone chromosomal protein [Saccharomyces cerevisiae
RM11-1a]
gi|256274037|gb|EEU08951.1| Nhp6bp [Saccharomyces cerevisiae JAY291]
gi|290878106|emb|CBK39165.1| Nhp6bp [Saccharomyces cerevisiae EC1118]
gi|333454471|tpg|DAA07210.2| TPA: Nhp6bp [Saccharomyces cerevisiae S288c]
Length = 99
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 61/81 (75%)
Query: 428 KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEER 487
KK+ ++KKDPNAPKR +S ++FF+ R+ ++ NP + F VGR+LGERWK ++ EE+
Sbjct: 14 KKRTTRRKKDPNAPKRGLSAYMFFANENRDIVRSENPDVTFGQVGRILGERWKALTAEEK 73
Query: 488 EPYESKARADKKRYKDEISGY 508
+PYESKA+ADKKRY+ E Y
Sbjct: 74 QPYESKAQADKKRYESEKELY 94
>gi|387592245|gb|EIJ87269.1| hypothetical protein NEQG_02604 [Nematocida parisii ERTm3]
gi|387597414|gb|EIJ95034.1| hypothetical protein NEPG_00559 [Nematocida parisii ERTm1]
Length = 490
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 128/262 (48%), Gaps = 21/262 (8%)
Query: 101 LTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQP----HTFVVVTLDPPI 156
+ PRG+Y + L S++ L G+ ++ YSS+ RLF L ++ + ++++ L+ P+
Sbjct: 198 ILPRGKYKITLTSSYIHLIGKRYSHQMLYSSISRLFYLERNAEEGVEEMSYLIFELNTPV 257
Query: 157 RKGQTLYPHIVLQFETDYV---------VQSELLMSEELLNTKYKDKLEPS-----YKGL 202
R+GQT Y + L + V + E ++ + K K+E +G
Sbjct: 258 RQGQTRYHFVNLLVPEEKVKMILGKNSTIIYPEDEEEPPVDPEEKRKIEERGIDYIQEGT 317
Query: 203 IHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLI 262
+ ++ LSG K G F + G A+K SLKA +G LYPL+ F F+P+ I
Sbjct: 318 LSGCVVDMVEKLSGIKAMNTGTFATFAGGKALKCSLKANEGYLYPLKNGFLFVPQ-IVYI 376
Query: 263 LHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIM 322
+ I VEF R FD+ + L ++E++F IQ+ +Y+ L ++ K + +
Sbjct: 377 EYNHIKTVEFSRVNLSSRTAKTFDVRVILLDKKEYMFNGIQKVDYNALETYLGKKDVNCL 436
Query: 323 NLGDMKTTDGVAAVLQEDDDDA 344
N ++ + AAV ED++ A
Sbjct: 437 N--EVVNEEWAAAVSDEDEETA 456
>gi|392300930|gb|EIW12019.1| Nhp6bp [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 162
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 63/84 (75%)
Query: 425 EDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSV 484
++ KK+ ++KKDPNAPKR +S ++FF+ R+ ++ NP + F VGR+LGERWK ++
Sbjct: 74 KEPKKRTTRRKKDPNAPKRGLSAYMFFANENRDIVRSENPDVTFGQVGRILGERWKALTA 133
Query: 485 EEREPYESKARADKKRYKDEISGY 508
EE++PYESKA+ADKKRY+ E Y
Sbjct: 134 EEKQPYESKAQADKKRYESEKELY 157
>gi|1870104|emb|CAA85042.1| NHP6B [Saccharomyces cerevisiae]
Length = 99
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 61/81 (75%)
Query: 428 KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEER 487
KK+ ++KKDPNAPKR +S ++FF+ R+ ++ NP + F VGR+LGERWK ++ EE+
Sbjct: 14 KKRTTRRKKDPNAPKRRLSAYMFFANENRDIVRSENPDVTFGQVGRILGERWKALTAEEK 73
Query: 488 EPYESKARADKKRYKDEISGY 508
+PYESKA+ADKKRY+ E Y
Sbjct: 74 QPYESKAQADKKRYESEKELY 94
>gi|212526742|ref|XP_002143528.1| nucleosome binding protein (Nhp6a), putative [Talaromyces marneffei
ATCC 18224]
gi|212526744|ref|XP_002143529.1| nucleosome binding protein (Nhp6a), putative [Talaromyces marneffei
ATCC 18224]
gi|210072926|gb|EEA27013.1| nucleosome binding protein (Nhp6a), putative [Talaromyces marneffei
ATCC 18224]
gi|210072927|gb|EEA27014.1| nucleosome binding protein (Nhp6a), putative [Talaromyces marneffei
ATCC 18224]
Length = 103
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 65/98 (66%), Gaps = 7/98 (7%)
Query: 411 VKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTD 470
K T++K R G E K+KKDPNAPKR +S ++FF+ RE ++ NPGIAF
Sbjct: 2 AKEKTTRKAKRGGVE-------KRKKDPNAPKRGLSAYMFFANENRERVRDENPGIAFGA 54
Query: 471 VGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGY 508
+GR LGE WK +S ER+PYE KA ADKKRY+D+ + Y
Sbjct: 55 LGRKLGELWKGLSDSERKPYEDKAAADKKRYEDQKATY 92
>gi|258563818|ref|XP_002582654.1| nonhistone chromosomal protein 6A [Uncinocarpus reesii 1704]
gi|237908161|gb|EEP82562.1| nonhistone chromosomal protein 6A [Uncinocarpus reesii 1704]
Length = 115
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 57/71 (80%)
Query: 438 PNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARAD 497
PNAPKR +S ++FF+ +REN+++ NPGI+F VG++LGERWK +S ++R PYE KA AD
Sbjct: 22 PNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKLLGERWKALSDKQRAPYEEKAAAD 81
Query: 498 KKRYKDEISGY 508
KKRY+DE + Y
Sbjct: 82 KKRYEDEKASY 92
>gi|444323521|ref|XP_004182401.1| hypothetical protein TBLA_0I02240 [Tetrapisispora blattae CBS 6284]
gi|387515448|emb|CCH62882.1| hypothetical protein TBLA_0I02240 [Tetrapisispora blattae CBS 6284]
Length = 94
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 61/83 (73%)
Query: 426 DGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVE 485
+ KK+ ++KKDPNAPKRA+S ++FF+ R+ ++ NP + F VG++LGERWK +S E
Sbjct: 6 ETKKRSTRRKKDPNAPKRALSAYMFFANETRDIVRSENPDVTFGQVGKILGERWKALSAE 65
Query: 486 EREPYESKARADKKRYKDEISGY 508
E+ PYE+KA ADKKRY+ E Y
Sbjct: 66 EKVPYETKAEADKKRYESEKELY 88
>gi|349576469|dbj|GAA21640.1| K7_Nhp6bp [Saccharomyces cerevisiae Kyokai no. 7]
Length = 99
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 61/81 (75%)
Query: 428 KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEER 487
KK+ ++KKDPNAPKR +S ++FF+ R+ ++ NP + F VGR+LGE+WK ++ EE+
Sbjct: 14 KKRTTRRKKDPNAPKRGLSAYMFFANENRDIVRSENPDVTFGQVGRILGEKWKALTAEEK 73
Query: 488 EPYESKARADKKRYKDEISGY 508
+PYESKA+ADKKRY+ E Y
Sbjct: 74 QPYESKAQADKKRYESEKELY 94
>gi|401626897|gb|EJS44815.1| nhp6bp [Saccharomyces arboricola H-6]
Length = 99
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 60/81 (74%)
Query: 428 KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEER 487
KK+ ++KKDPNAPKR +S ++FF+ R+ ++ NP + F VGR+LGERWK ++ EE+
Sbjct: 14 KKRTTRRKKDPNAPKRGLSAYMFFANETRDIVRSENPDVTFGQVGRILGERWKALTAEEK 73
Query: 488 EPYESKARADKKRYKDEISGY 508
PYESKA+ADKKRY+ E Y
Sbjct: 74 VPYESKAQADKKRYESEKELY 94
>gi|242781691|ref|XP_002479852.1| nucleosome binding protein (Nhp6a), putative [Talaromyces
stipitatus ATCC 10500]
gi|242781695|ref|XP_002479853.1| nucleosome binding protein (Nhp6a), putative [Talaromyces
stipitatus ATCC 10500]
gi|242781700|ref|XP_002479854.1| nucleosome binding protein (Nhp6a), putative [Talaromyces
stipitatus ATCC 10500]
gi|218719999|gb|EED19418.1| nucleosome binding protein (Nhp6a), putative [Talaromyces
stipitatus ATCC 10500]
gi|218720000|gb|EED19419.1| nucleosome binding protein (Nhp6a), putative [Talaromyces
stipitatus ATCC 10500]
gi|218720001|gb|EED19420.1| nucleosome binding protein (Nhp6a), putative [Talaromyces
stipitatus ATCC 10500]
Length = 103
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 58/77 (75%)
Query: 432 QKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYE 491
+K+KKDPNAPKR +S ++FF+ RE ++ NPGIAF +GR LGE WK +S ER+PYE
Sbjct: 16 EKRKKDPNAPKRGLSAYMFFANENRERVRDENPGIAFGALGRKLGELWKGLSDAERKPYE 75
Query: 492 SKARADKKRYKDEISGY 508
KA ADKKRY+D+ + Y
Sbjct: 76 DKAAADKKRYEDQKASY 92
>gi|365762037|gb|EHN03653.1| Nhp6bp [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401841847|gb|EJT44170.1| NHP6B-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 102
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 68/96 (70%)
Query: 413 ASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVG 472
A+T + K ++ KK+ ++KKDPNAPKR +S ++FF+ R+ ++ NP + F VG
Sbjct: 2 AATKEPKQPKQTKEPKKRTTRRKKDPNAPKRGLSAYMFFANENRDIVRSENPDVTFGQVG 61
Query: 473 RVLGERWKKMSVEEREPYESKARADKKRYKDEISGY 508
R+LGE+WK ++ E+++PYESKA+ADKKRY+ E Y
Sbjct: 62 RILGEKWKALTAEDKQPYESKAQADKKRYESEKELY 97
>gi|448079731|ref|XP_004194450.1| Piso0_004944 [Millerozyma farinosa CBS 7064]
gi|359375872|emb|CCE86454.1| Piso0_004944 [Millerozyma farinosa CBS 7064]
Length = 92
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 63/81 (77%)
Query: 428 KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEER 487
KK+ +KKKDP+APKR++S ++FF+ R+ ++ NPGI+F VG++LGE+WK MS E++
Sbjct: 6 KKRASRKKKDPDAPKRSLSAYMFFANENRDIVRAENPGISFGQVGKLLGEKWKAMSSEDK 65
Query: 488 EPYESKARADKKRYKDEISGY 508
PYE+KA ADKKRY+ E + Y
Sbjct: 66 TPYETKAEADKKRYEKEKAEY 86
>gi|302309760|ref|XP_002999554.1| hypothetical protein [Candida glabrata CBS 138]
gi|196049084|emb|CAR57991.1| unnamed protein product [Candida glabrata]
Length = 93
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 61/81 (75%)
Query: 428 KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEER 487
++K ++KKDPNAPKRA+S ++FF+ R+ ++ NP + F +GR+LGERWK ++ E++
Sbjct: 8 RRKTTRRKKDPNAPKRALSAYMFFANENRDIVRSENPDVTFGQIGRLLGERWKALTAEDK 67
Query: 488 EPYESKARADKKRYKDEISGY 508
+PYE+KA ADKKRY+ E Y
Sbjct: 68 QPYEAKAEADKKRYESEKELY 88
>gi|425767422|gb|EKV05996.1| Non-histone chromosomal protein 6 [Penicillium digitatum PHI26]
gi|425779648|gb|EKV17689.1| Non-histone chromosomal protein 6 [Penicillium digitatum Pd1]
Length = 189
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 69/94 (73%), Gaps = 3/94 (3%)
Query: 415 TSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRV 474
++ K +R E K+ Q++KKDPNAPKR +S ++FF+ R+ +++ NPGI+F VG+
Sbjct: 86 STTKSTRKAPE---KRVQRRKKDPNAPKRGLSAYMFFANDNRDKVREENPGISFGQVGKQ 142
Query: 475 LGERWKKMSVEEREPYESKARADKKRYKDEISGY 508
LG++WK +S +R+PY++KA ADKKRY++E + Y
Sbjct: 143 LGDKWKALSETDRKPYDAKAAADKKRYEEEKAAY 176
>gi|403217000|emb|CCK71495.1| hypothetical protein KNAG_0H00800 [Kazachstania naganishii CBS
8797]
Length = 118
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 60/81 (74%)
Query: 428 KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEER 487
KK+ +KKKDPNAPKR+MS ++FF+ R+ +K NP F +G++LGE+WK MS E++
Sbjct: 32 KKRVTRKKKDPNAPKRSMSAYMFFANENRDIVKSENPNATFGQLGKLLGEKWKNMSTEDK 91
Query: 488 EPYESKARADKKRYKDEISGY 508
EPY++KA ADKKRY+ E Y
Sbjct: 92 EPYDAKAAADKKRYESEKELY 112
>gi|363755760|ref|XP_003648095.1| hypothetical protein Ecym_7459 [Eremothecium cymbalariae
DBVPG#7215]
gi|356892131|gb|AET41278.1| hypothetical protein Ecym_7459 [Eremothecium cymbalariae
DBVPG#7215]
Length = 94
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 57/76 (75%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKRAMS ++FF+ R+ ++ NPGI+F VGRVLGE+WK +S +E++PYE+KA A
Sbjct: 17 DPNAPKRAMSAYMFFANENRDIVRAENPGISFGQVGRVLGEKWKALSDDEKQPYEAKAEA 76
Query: 497 DKKRYKDEISGYKNPK 512
DKKRY+ E Y K
Sbjct: 77 DKKRYESEKELYNATK 92
>gi|45187563|ref|NP_983786.1| ADL310Wp [Ashbya gossypii ATCC 10895]
gi|74694642|sp|Q75B82.1|NHP6_ASHGO RecName: Full=Non-histone chromosomal protein 6
gi|44982301|gb|AAS51610.1| ADL310Wp [Ashbya gossypii ATCC 10895]
gi|374106998|gb|AEY95906.1| FADL310Wp [Ashbya gossypii FDAG1]
Length = 94
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 57/76 (75%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKRAMS ++FF+ R+ ++ NPGI+F VGRVLGE+WK +S +E++PYE+KA A
Sbjct: 17 DPNAPKRAMSAYMFFANENRDIVRAENPGISFGQVGRVLGEKWKALSDDEKQPYEAKAEA 76
Query: 497 DKKRYKDEISGYKNPK 512
DKKRY+ E Y K
Sbjct: 77 DKKRYESEKELYNATK 92
>gi|403217833|emb|CCK72326.1| hypothetical protein KNAG_0J02470 [Kazachstania naganishii CBS
8797]
Length = 92
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 60/81 (74%)
Query: 428 KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEER 487
KK++ ++KKDPNAPKRA+S ++FF+ R+ ++ NP + F +GR+LGERWK + E R
Sbjct: 7 KKRQTRRKKDPNAPKRALSAYMFFANENRDIVRSENPDVTFGQIGRLLGERWKALDGEGR 66
Query: 488 EPYESKARADKKRYKDEISGY 508
EPYE+KA ADKKRY+ E Y
Sbjct: 67 EPYEAKAAADKKRYESEKELY 87
>gi|50548527|ref|XP_501733.1| YALI0C11671p [Yarrowia lipolytica]
gi|74635076|sp|Q6CC79.1|NHP6_YARLI RecName: Full=Non-histone chromosomal protein 6
gi|49647600|emb|CAG82043.1| YALI0C11671p [Yarrowia lipolytica CLIB122]
Length = 103
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 55/73 (75%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKRA+S ++FF+ R+ I+ NPGIAF VG+ LGE+WK ++ E+ PYE KA A
Sbjct: 21 DPNAPKRALSAYMFFANDNRDAIRADNPGIAFGQVGKALGEKWKTLTDAEKVPYEEKATA 80
Query: 497 DKKRYKDEISGYK 509
DKKRY+DE + YK
Sbjct: 81 DKKRYEDEKAAYK 93
>gi|448084218|ref|XP_004195549.1| Piso0_004944 [Millerozyma farinosa CBS 7064]
gi|359376971|emb|CCE85354.1| Piso0_004944 [Millerozyma farinosa CBS 7064]
Length = 92
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 63/81 (77%)
Query: 428 KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEER 487
KK+ +KKKDP+APKR++S ++FF+ R+ ++ NPGI+F VG++LGE+WK M+ +++
Sbjct: 6 KKRASRKKKDPDAPKRSLSAYMFFANENRDIVRAENPGISFGQVGKLLGEKWKAMTSDDK 65
Query: 488 EPYESKARADKKRYKDEISGY 508
PYESKA ADKKRY+ E + Y
Sbjct: 66 TPYESKAEADKKRYEKEKAEY 86
>gi|255715687|ref|XP_002554125.1| KLTH0E14850p [Lachancea thermotolerans]
gi|238935507|emb|CAR23688.1| KLTH0E14850p [Lachancea thermotolerans CBS 6340]
Length = 93
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 62/83 (74%)
Query: 426 DGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVE 485
+ KK+ ++KKDPNAPKRA+S ++FF+ R+ ++ NPG+ F VGR+LG++WK ++ E
Sbjct: 6 EAKKRTTRRKKDPNAPKRALSAYMFFANENRDIVRAENPGVTFGQVGRLLGDKWKALTDE 65
Query: 486 EREPYESKARADKKRYKDEISGY 508
E++PYE+K ADKKRY+ E Y
Sbjct: 66 EKQPYEAKHAADKKRYESEKELY 88
>gi|238565646|ref|XP_002385897.1| hypothetical protein MPER_16072 [Moniliophthora perniciosa FA553]
gi|215436254|gb|EEB86827.1| hypothetical protein MPER_16072 [Moniliophthora perniciosa FA553]
Length = 138
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 83/130 (63%), Gaps = 3/130 (2%)
Query: 90 EAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVV 149
+ V++FE + +LTPRGRY V + FLRL+G+ D+KI+Y+ + RLFLLPK + H +
Sbjct: 4 DMVLSFEEVLVLTPRGRYDVIMFPEFLRLRGKTYDYKIEYTKISRLFLLPKDDL-HVLFI 62
Query: 150 VTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTT 209
+ L PIR+GQT Y ++++QF + +EL M +E + KY +KL +Y EV ++
Sbjct: 63 LGLTHPIRQGQTPYQYLIMQFSREEETTAELNMDDEEV-AKY-EKLNKNYDDPTFEVVSS 120
Query: 210 ILRGLSGAKI 219
+ R LS KI
Sbjct: 121 VFRALSKKKI 130
>gi|315051466|ref|XP_003175107.1| non-histone chromosomal protein 6 [Arthroderma gypseum CBS 118893]
gi|311340422|gb|EFQ99624.1| non-histone chromosomal protein 6 [Arthroderma gypseum CBS 118893]
Length = 102
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 59/77 (76%)
Query: 432 QKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYE 491
+KKKKDPNAPKR +S ++ F+ +R ++++ NP I F VG+VLGERWK ++ ++R+PYE
Sbjct: 16 EKKKKDPNAPKRGLSAYMIFANEQRASVREENPSITFGQVGKVLGERWKALTDKQRKPYE 75
Query: 492 SKARADKKRYKDEISGY 508
KA DK+RY+DE + Y
Sbjct: 76 EKAATDKQRYEDEKAAY 92
>gi|357466441|ref|XP_003603505.1| Non-histone chromosomal protein [Medicago truncatula]
gi|355492553|gb|AES73756.1| Non-histone chromosomal protein [Medicago truncatula]
Length = 131
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/106 (57%), Positives = 74/106 (69%), Gaps = 6/106 (5%)
Query: 422 DGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKK 481
D DED KKKKQKKK+DPNAPK +SGF FS+ EREN+KK+N GI+FTDV RV+GE+WKK
Sbjct: 30 DADEDVKKKKQKKKRDPNAPKSVLSGFKLFSRKERENLKKTNIGISFTDVVRVIGEKWKK 89
Query: 482 MS--VEEREPYESKARADKKRYKDEISGYKNPKPMDIDSGNESDSA 525
MS + + K +K Y DEIS +PM+ID GNE SA
Sbjct: 90 MSDMLSKMSHTRQKPVLIEKYYLDEISA----QPMNIDPGNEYGSA 131
>gi|453083241|gb|EMF11287.1| HMG_box-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 109
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 67/97 (69%), Gaps = 4/97 (4%)
Query: 412 KASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDV 471
K +T K G DG K+KKDPN PKR +S ++FF+ R+ +++ NPGI F +V
Sbjct: 5 KTTTRGSKKAAGKADG----GKRKKDPNMPKRGLSAYMFFANDTRDKVREDNPGIKFGEV 60
Query: 472 GRVLGERWKKMSVEEREPYESKARADKKRYKDEISGY 508
G++LGERWK ++ +++ PYE+KA ADKKRY++E + Y
Sbjct: 61 GKLLGERWKALNEKQKAPYEAKAAADKKRYEEEKAAY 97
>gi|302497713|ref|XP_003010856.1| hypothetical protein ARB_02895 [Arthroderma benhamiae CBS 112371]
gi|291174401|gb|EFE30216.1| hypothetical protein ARB_02895 [Arthroderma benhamiae CBS 112371]
Length = 106
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 57/77 (74%)
Query: 432 QKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYE 491
+KKKKDPNAPKR +S ++ F+ +R +++ NP I F VG+VLGERWK +S ++R PYE
Sbjct: 15 EKKKKDPNAPKRGLSAYMIFANEQRAAVREENPNITFGQVGKVLGERWKALSDKQRVPYE 74
Query: 492 SKARADKKRYKDEISGY 508
KA DK+RY+DE + Y
Sbjct: 75 EKAATDKQRYEDEKAAY 91
>gi|327296079|ref|XP_003232734.1| non-histone chromosomal protein 6 [Trichophyton rubrum CBS 118892]
gi|326465045|gb|EGD90498.1| non-histone chromosomal protein 6 [Trichophyton rubrum CBS 118892]
Length = 102
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 65/97 (67%), Gaps = 7/97 (7%)
Query: 412 KASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDV 471
K T+ +K++ G E KKKKDPNAPKR +S ++ F+ +R +++ NP I F V
Sbjct: 3 KEKTTARKTKRGVE-------KKKKDPNAPKRGLSAYMIFANEQRAAVREENPNITFGQV 55
Query: 472 GRVLGERWKKMSVEEREPYESKARADKKRYKDEISGY 508
G+VLGERWK +S ++R PYE KA DK+RY+DE + Y
Sbjct: 56 GKVLGERWKALSDKQRVPYEEKAATDKQRYEDEKAAY 92
>gi|126274287|ref|XP_001387507.1| Nonhistone chromosomal protein 6A [Scheffersomyces stipitis CBS
6054]
gi|126213377|gb|EAZ63484.1| Nonhistone chromosomal protein 6A, partial [Scheffersomyces
stipitis CBS 6054]
Length = 85
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 63/81 (77%)
Query: 428 KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEER 487
K+K +KKKDP+APKR++S ++FF+ R+ ++ NPGI+F VG++LGE+WK ++ EE+
Sbjct: 5 KRKATRKKKDPDAPKRSLSAYMFFANENRDIVRAENPGISFGQVGKLLGEKWKALTGEEK 64
Query: 488 EPYESKARADKKRYKDEISGY 508
PYE+KA ADKKRY+ E + Y
Sbjct: 65 GPYENKAEADKKRYEKEKAEY 85
>gi|326475470|gb|EGD99479.1| nucleosome binding protein [Trichophyton tonsurans CBS 112818]
Length = 102
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 57/77 (74%)
Query: 432 QKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYE 491
+KKKKDPNAPKR +S ++ F+ +R +++ NP I F VG+VLGERWK +S ++R PYE
Sbjct: 16 EKKKKDPNAPKRGLSAYMIFANEQRAAVREENPNITFGQVGKVLGERWKALSDKQRVPYE 75
Query: 492 SKARADKKRYKDEISGY 508
KA DK+RY+DE + Y
Sbjct: 76 EKAATDKQRYEDEKAAY 92
>gi|384491850|gb|EIE83046.1| hypothetical protein RO3G_07751 [Rhizopus delemar RA 99-880]
Length = 101
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 70/99 (70%), Gaps = 5/99 (5%)
Query: 406 KESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPG 465
KE++ V A + K D++ KK ++ KKDP+APKR +S ++FFSQ +R +K+ NP
Sbjct: 3 KETTKVTAKRAAK-----DDNDTKKARRSKKDPSAPKRGLSAYMFFSQDQRPTVKEENPK 57
Query: 466 IAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDE 504
+F ++G++LGERWK +S EE++PY KA DKKRY+DE
Sbjct: 58 ASFGEIGKILGERWKALSEEEKKPYLKKAEDDKKRYEDE 96
>gi|385302209|gb|EIF46351.1| nucleosome binding protein [Dekkera bruxellensis AWRI1499]
Length = 91
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 62/80 (77%)
Query: 429 KKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEERE 488
+K +KKKDPNAPKR++S ++FF+ +R+ ++ NPGIAF +G++LGE+WK + + RE
Sbjct: 3 RKGTRKKKDPNAPKRSLSAYMFFANEQRDIVRAENPGIAFGQIGKILGEKWKALDKKGRE 62
Query: 489 PYESKARADKKRYKDEISGY 508
PY++KA ADKKRY+ E + Y
Sbjct: 63 PYDAKAAADKKRYELEKAEY 82
>gi|328350132|emb|CCA36532.1| Hepatocyte growth factor-regulated tyrosine kinase substrate
[Komagataella pastoris CBS 7435]
Length = 725
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 60/81 (74%)
Query: 428 KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEER 487
+ K +KKKDPNAPKR++S ++FF+ +R+ ++ NPGI F ++G++LGE+WK + E +
Sbjct: 636 RTKTGRKKKDPNAPKRSLSAYMFFANEQRDIVRSENPGIQFGEIGKLLGEKWKALDAEGK 695
Query: 488 EPYESKARADKKRYKDEISGY 508
PYESKA DKKRY+ E + Y
Sbjct: 696 APYESKAEEDKKRYELEKAEY 716
>gi|255936601|ref|XP_002559327.1| Pc13g09020 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583947|emb|CAP91971.1| Pc13g09020 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 108
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 62/80 (77%)
Query: 429 KKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEERE 488
K+ Q++KKDPNAPKR +S ++FF+ R+ +++ NPGI+F VG+ LG++WK +S +R+
Sbjct: 16 KRVQRRKKDPNAPKRGLSAYMFFANDNRDKVREENPGISFGQVGKQLGDKWKALSETDRK 75
Query: 489 PYESKARADKKRYKDEISGY 508
PY+ KA ADKKRY++E + Y
Sbjct: 76 PYDDKAAADKKRYEEEKAAY 95
>gi|115396468|ref|XP_001213873.1| nonhistone chromosomal protein 6A [Aspergillus terreus NIH2624]
gi|114193442|gb|EAU35142.1| nonhistone chromosomal protein 6A [Aspergillus terreus NIH2624]
Length = 101
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 55/72 (76%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR +S ++FF+ R+ +++ NPGI F VG++LGE+WK +S ++R PYE KA A
Sbjct: 19 DPNAPKRGLSAYMFFANENRDKVREENPGITFGQVGKMLGEKWKALSEDDRRPYEEKAAA 78
Query: 497 DKKRYKDEISGY 508
DKKRY+DE + Y
Sbjct: 79 DKKRYEDEKASY 90
>gi|296810682|ref|XP_002845679.1| non-histone chromosomal protein 6 [Arthroderma otae CBS 113480]
gi|238843067|gb|EEQ32729.1| non-histone chromosomal protein 6 [Arthroderma otae CBS 113480]
Length = 103
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 57/77 (74%)
Query: 432 QKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYE 491
+KKKKDPNAPKR +S ++ F+ +R +++ NP I F VG+VLGERWK +S ++R PYE
Sbjct: 17 EKKKKDPNAPKRGLSAYMIFANEQRAAVREENPNITFGQVGKVLGERWKALSDKQRVPYE 76
Query: 492 SKARADKKRYKDEISGY 508
KA DK+RY+DE + Y
Sbjct: 77 EKAATDKQRYEDEKAAY 93
>gi|156837652|ref|XP_001642846.1| hypothetical protein Kpol_376p1 [Vanderwaltozyma polyspora DSM
70294]
gi|156113421|gb|EDO14988.1| hypothetical protein Kpol_376p1 [Vanderwaltozyma polyspora DSM
70294]
Length = 93
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 62/83 (74%)
Query: 426 DGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVE 485
+ KK+ ++KKDPNAPKRA+S ++FF+ R+ ++ NP ++F VGR+LGE+WK ++ E
Sbjct: 6 ESKKRTTRRKKDPNAPKRALSAYMFFANETRDIVRAENPDVSFGQVGRILGEKWKALTPE 65
Query: 486 EREPYESKARADKKRYKDEISGY 508
++ P+E+KA ADKKRY+ E Y
Sbjct: 66 DKVPFEAKAEADKKRYESEKELY 88
>gi|452839855|gb|EME41794.1| hypothetical protein DOTSEDRAFT_74007 [Dothistroma septosporum
NZE10]
Length = 108
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 59/76 (77%)
Query: 433 KKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYES 492
KKKKDPN PKR +S ++FF+ +R+ ++ NPGI F +VG+ LGE+WK +S +++ PYE+
Sbjct: 22 KKKKDPNMPKRGLSAYMFFANEQRDKVRDDNPGIKFGEVGKQLGEKWKGLSEKQKAPYEA 81
Query: 493 KARADKKRYKDEISGY 508
KA ADKKRY++E + Y
Sbjct: 82 KAAADKKRYEEEKAAY 97
>gi|238486744|ref|XP_002374610.1| nucleosome binding protein (Nhp6a), putative [Aspergillus flavus
NRRL3357]
gi|317144043|ref|XP_003189559.1| non-histone chromosomal protein 6 [Aspergillus oryzae RIB40]
gi|220699489|gb|EED55828.1| nucleosome binding protein (Nhp6a), putative [Aspergillus flavus
NRRL3357]
Length = 104
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 55/70 (78%)
Query: 432 QKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYE 491
++KKKDPNAPKR +S ++FF+ RE +++ NPGI+F VG++LGE+WK +S +R PYE
Sbjct: 16 ERKKKDPNAPKRGLSAYMFFANDNREKVREENPGISFGQVGKMLGEKWKALSEADRRPYE 75
Query: 492 SKARADKKRY 501
KA ADKKRY
Sbjct: 76 DKAAADKKRY 85
>gi|366996751|ref|XP_003678138.1| hypothetical protein NCAS_0I01260 [Naumovozyma castellii CBS 4309]
gi|342304009|emb|CCC71794.1| hypothetical protein NCAS_0I01260 [Naumovozyma castellii CBS 4309]
Length = 94
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 62/84 (73%)
Query: 425 EDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSV 484
++ KK+ ++KKDPNAPKRA+S ++FF+ R+ ++ NP + F VG++LGERWK ++
Sbjct: 6 KEPKKRTVRRKKDPNAPKRALSSYMFFANATRDIVRSENPDVTFGQVGKLLGERWKALTP 65
Query: 485 EEREPYESKARADKKRYKDEISGY 508
EE+EP+E KA+ DK+RY E + Y
Sbjct: 66 EEKEPFELKAKQDKERYASEKALY 89
>gi|344300446|gb|EGW30767.1| Non-histone chromosomal protein 6 [Spathaspora passalidarum NRRL
Y-27907]
Length = 93
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 62/81 (76%)
Query: 428 KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEER 487
K+K +KKKDP+APKR++S ++FF+ R+ ++ NPGI+F VG++LGE+WK ++ +E+
Sbjct: 7 KRKATRKKKDPDAPKRSLSAYMFFANENRDIVRAENPGISFGQVGKLLGEKWKALTADEK 66
Query: 488 EPYESKARADKKRYKDEISGY 508
PYE+KA DKKRY+ E + Y
Sbjct: 67 VPYENKAETDKKRYEKEKAEY 87
>gi|344228278|gb|EGV60164.1| hypothetical protein CANTEDRAFT_110112 [Candida tenuis ATCC 10573]
Length = 89
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 61/81 (75%)
Query: 428 KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEER 487
+KK +KKKDP+APKR++S ++FF+ R+ ++ NPGIAF VGR+LGERWK ++ +E+
Sbjct: 4 RKKAVRKKKDPDAPKRSLSAYMFFANDNRDIVRAENPGIAFGQVGRLLGERWKALTADEK 63
Query: 488 EPYESKARADKKRYKDEISGY 508
PYE KA DKKRY+ + + Y
Sbjct: 64 IPYEKKANDDKKRYEKQKAEY 84
>gi|448530095|ref|XP_003869985.1| Nhp6a non-histone chromatin component [Candida orthopsilosis Co
90-125]
gi|354547725|emb|CCE44460.1| hypothetical protein CPAR2_402610 [Candida parapsilosis]
gi|380354339|emb|CCG23854.1| Nhp6a non-histone chromatin component [Candida orthopsilosis]
Length = 93
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 62/81 (76%)
Query: 428 KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEER 487
K+K +KKKDP+APKR++S ++FF+ R+ ++ NPGI+F VG+ LG++WK +S E++
Sbjct: 7 KRKVSRKKKDPDAPKRSLSAYMFFANENRDIVRAENPGISFGQVGKALGDKWKALSAEDK 66
Query: 488 EPYESKARADKKRYKDEISGY 508
PYE+KA ADKKRY+ E + Y
Sbjct: 67 VPYENKAEADKKRYEKEKAEY 87
>gi|347441690|emb|CCD34611.1| similar to transcription factor HMG [Botryotinia fuckeliana]
Length = 101
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 56/72 (77%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR +S ++FF+ +R+N+++ NPGI+F VG+VLGERWK ++ ++R PYE A
Sbjct: 20 DPNAPKRGLSAYMFFANEQRDNVREENPGISFGQVGKVLGERWKALNEKQRGPYEESAAK 79
Query: 497 DKKRYKDEISGY 508
DKKRY++E + Y
Sbjct: 80 DKKRYEEEKANY 91
>gi|451847653|gb|EMD60960.1| hypothetical protein COCSADRAFT_98214 [Cochliobolus sativus ND90Pr]
Length = 106
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 57/72 (79%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR +S ++FF+ +RE +++ NPGI F +VG++LGE+WK ++ ++R+PYE+KA
Sbjct: 24 DPNAPKRGLSAYMFFANEQREKVREDNPGIKFGEVGKLLGEKWKALNEKQRQPYEAKAAL 83
Query: 497 DKKRYKDEISGY 508
DKKRY+ E + Y
Sbjct: 84 DKKRYEQEKAAY 95
>gi|367006853|ref|XP_003688157.1| hypothetical protein TPHA_0M01480 [Tetrapisispora phaffii CBS 4417]
gi|357526464|emb|CCE65723.1| hypothetical protein TPHA_0M01480 [Tetrapisispora phaffii CBS 4417]
Length = 93
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 64/86 (74%)
Query: 423 GDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKM 482
G + KK+ ++KKDPNAPKRAMS ++FF+ R+ ++ NP ++F +GR+LGE+W+ +
Sbjct: 3 GPREIKKRTHRRKKDPNAPKRAMSAYMFFANETRDIVRAENPDVSFGQIGRLLGEKWRAL 62
Query: 483 SVEEREPYESKARADKKRYKDEISGY 508
+ E++ P+E+KA+ADKKRY+ E Y
Sbjct: 63 TDEDKGPFEAKAQADKKRYESEKELY 88
>gi|451996730|gb|EMD89196.1| hypothetical protein COCHEDRAFT_1107529 [Cochliobolus
heterostrophus C5]
Length = 105
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 57/72 (79%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR +S ++FF+ +RE +++ NPGI F +VG++LGE+WK ++ ++R+PYE+KA
Sbjct: 23 DPNAPKRGLSAYMFFANEQREKVREDNPGIKFGEVGKLLGEKWKALNDKQRQPYEAKAAL 82
Query: 497 DKKRYKDEISGY 508
DKKRY+ E + Y
Sbjct: 83 DKKRYEQEKAAY 94
>gi|189205162|ref|XP_001938916.1| non-histone chromosomal protein 6 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|330923152|ref|XP_003300124.1| hypothetical protein PTT_11280 [Pyrenophora teres f. teres 0-1]
gi|187986015|gb|EDU51503.1| non-histone chromosomal protein 6 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|311325919|gb|EFQ91802.1| hypothetical protein PTT_11280 [Pyrenophora teres f. teres 0-1]
Length = 106
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 58/72 (80%)
Query: 438 PNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARAD 497
PNAPKR +S ++FF+ +RE +++ NPGI F +VG++LGE+WK ++ ++R PYE+KA AD
Sbjct: 25 PNAPKRGLSAYMFFANEQREKVREDNPGIKFGEVGKLLGEKWKALNEKQRTPYEAKAAAD 84
Query: 498 KKRYKDEISGYK 509
KKRY++E + Y+
Sbjct: 85 KKRYEEEKAAYQ 96
>gi|146412508|ref|XP_001482225.1| hypothetical protein PGUG_05245 [Meyerozyma guilliermondii ATCC
6260]
gi|146392989|gb|EDK41147.1| hypothetical protein PGUG_05245 [Meyerozyma guilliermondii ATCC
6260]
Length = 90
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 56/72 (77%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DP+APKR++S ++FF+ R+ I+ NPGIAF VG++LGE+WK M+ +E+ PYE+KA A
Sbjct: 13 DPDAPKRSLSAYMFFANENRDIIRAENPGIAFGQVGKLLGEKWKAMNADEKVPYETKAEA 72
Query: 497 DKKRYKDEISGY 508
DKKRY+ E + Y
Sbjct: 73 DKKRYEKEKAEY 84
>gi|398406589|ref|XP_003854760.1| HMGB family protein [Zymoseptoria tritici IPO323]
gi|339474644|gb|EGP89736.1| HMGB family protein [Zymoseptoria tritici IPO323]
Length = 111
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 57/73 (78%)
Query: 438 PNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARAD 497
PN PKR +S ++FF+ +R+N+++ NPGI F +VG++LGERWK ++ +++ PYE+KA AD
Sbjct: 26 PNMPKRGLSAYMFFANEQRDNVREENPGIKFGEVGKLLGERWKGLNEKQKTPYEAKAAAD 85
Query: 498 KKRYKDEISGYKN 510
KKRY++E Y N
Sbjct: 86 KKRYEEEKKAYLN 98
>gi|366998295|ref|XP_003683884.1| hypothetical protein TPHA_0A03740 [Tetrapisispora phaffii CBS 4417]
gi|357522179|emb|CCE61450.1| hypothetical protein TPHA_0A03740 [Tetrapisispora phaffii CBS 4417]
Length = 93
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 55/72 (76%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKRA+S ++FF+ R+ +K NP ++F VGR+LGE+WK ++ EE+ P+E+KA A
Sbjct: 17 DPNAPKRALSAYMFFANETRDIVKAENPDVSFGQVGRILGEKWKALTAEEKIPFEAKAEA 76
Query: 497 DKKRYKDEISGY 508
DKKRY+ E + Y
Sbjct: 77 DKKRYESEKALY 88
>gi|237845111|ref|XP_002371853.1| high mobility group protein [Toxoplasma gondii ME49]
gi|211969517|gb|EEB04713.1| high mobility group protein [Toxoplasma gondii ME49]
gi|221480801|gb|EEE19228.1| high mobility group protein, putative [Toxoplasma gondii GT1]
gi|221501467|gb|EEE27242.1| high mobility group protein, putative [Toxoplasma gondii VEG]
Length = 302
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 59/82 (71%), Gaps = 2/82 (2%)
Query: 430 KKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGI--AFTDVGRVLGERWKKMSVEER 487
KK K KKDPNAPKR +S FIFFS+ +RE I + NP + +VG+++GE W K+S ++
Sbjct: 217 KKTKAKKDPNAPKRPLSAFIFFSKDKREEIIRKNPELKSKLAEVGKMVGEAWGKLSDAQK 276
Query: 488 EPYESKARADKKRYKDEISGYK 509
+PYESKA ADK RY+ E+ YK
Sbjct: 277 KPYESKAVADKARYEREMIAYK 298
>gi|367012149|ref|XP_003680575.1| hypothetical protein TDEL_0C04750 [Torulaspora delbrueckii]
gi|359748234|emb|CCE91364.1| hypothetical protein TDEL_0C04750 [Torulaspora delbrueckii]
Length = 93
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 53/72 (73%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKRA+S ++FF+ R+ ++ NP + F VGR+LGERWK ++ +E+ PYESKA A
Sbjct: 17 DPNAPKRALSAYMFFANENRDIVRSENPDVTFGQVGRLLGERWKALTPDEKTPYESKAEA 76
Query: 497 DKKRYKDEISGY 508
DKKRY+ E Y
Sbjct: 77 DKKRYESEKELY 88
>gi|300123607|emb|CBK24879.2| unnamed protein product [Blastocystis hominis]
Length = 313
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 91/162 (56%), Gaps = 3/162 (1%)
Query: 9 KQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFVGDENH 68
++ FE+ L ++SQ KN+V L+F +DT+ E +SL+ + F++P S ++ V +++
Sbjct: 126 RRLFELGLNELSQCAFPSKNEVELQFVEEDTSKTTE-ESLVTVRFYVPQSASEDVNEKDD 184
Query: 69 PPAQVFRDKIMSMADV--GAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFK 126
A + +I+ A + G A + +TPRGRY +E + +++R+ G +K
Sbjct: 185 TAAHRLQKQILERAVLVNNNGNMIAEIDDRLGQFVTPRGRYMMEFYDNYMRMNGNNYTYK 244
Query: 127 IQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVL 168
I Y ++ +++ + + H +V L P+R+GQ YPH+VL
Sbjct: 245 ILYKTISCIYMFEQPDLAHRALVFCLTRPLRQGQQTYPHLVL 286
>gi|169610541|ref|XP_001798689.1| hypothetical protein SNOG_08374 [Phaeosphaeria nodorum SN15]
gi|160702095|gb|EAT84650.2| hypothetical protein SNOG_08374 [Phaeosphaeria nodorum SN15]
Length = 106
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 58/72 (80%)
Query: 438 PNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARAD 497
PNAPKR +S ++FF+ +R+ +++ NPGI F +VG++LGE+WK ++ ++R PYE+KA AD
Sbjct: 25 PNAPKRGLSAYMFFANEQRDKVREDNPGIKFGEVGKMLGEKWKALNEKQRTPYEAKAAAD 84
Query: 498 KKRYKDEISGYK 509
KKRY++E + Y+
Sbjct: 85 KKRYEEEKAAYQ 96
>gi|331220978|ref|XP_003323164.1| high mobility group protein B1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309302154|gb|EFP78745.1| high mobility group protein B1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 106
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 68/98 (69%), Gaps = 3/98 (3%)
Query: 414 STSKKKSRDGDEDG---KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTD 470
+ S K++ D DG K K+ KK+KDPNAPKR +S +++FSQ RE IK NP ++F +
Sbjct: 6 TASSKRAPKLDCDGNPVKTKRVKKEKDPNAPKRPLSAYMYFSQDWRERIKTENPDVSFGE 65
Query: 471 VGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGY 508
+GR+LG +WK +S EE++PYE A DKKR++ E + Y
Sbjct: 66 IGRLLGLKWKGLSEEEKKPYEDMASRDKKRHEAEKAEY 103
>gi|213407940|ref|XP_002174741.1| predicted protein [Schizosaccharomyces japonicus yFS275]
gi|212002788|gb|EEB08448.1| predicted protein [Schizosaccharomyces japonicus yFS275]
Length = 134
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 54/75 (72%)
Query: 431 KQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPY 490
++ ++KDPNAPKR MS F+FFS RE IK+ NP F +G +LG++WK ++ E+EPY
Sbjct: 6 RKTRRKDPNAPKRNMSAFMFFSMSNREKIKEENPEATFGQIGSLLGKKWKTLTAVEKEPY 65
Query: 491 ESKARADKKRYKDEI 505
E KAR DK+RY+ E
Sbjct: 66 EEKARKDKERYEREC 80
>gi|19114226|ref|NP_593314.1| High-mobility group non-histone chromatin protein (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74627097|sp|P87057.1|NHP6_SCHPO RecName: Full=Non-histone chromosomal protein 6
gi|2058376|emb|CAB08172.1| High-mobility group non-histone chromatin protein (predicted)
[Schizosaccharomyces pombe]
Length = 108
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 53/78 (67%)
Query: 431 KQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPY 490
K +KKDPN PKR MS F+FFS RE +K NP F +G +LG+RWK+++ EREPY
Sbjct: 6 KSSRKKDPNTPKRNMSAFMFFSIENREKMKTDNPDATFGQLGSLLGKRWKELTSTEREPY 65
Query: 491 ESKARADKKRYKDEISGY 508
E KAR DK+RY+ E Y
Sbjct: 66 EEKARQDKERYERERKEY 83
>gi|300706654|ref|XP_002995575.1| hypothetical protein NCER_101483 [Nosema ceranae BRL01]
gi|239604736|gb|EEQ81904.1| hypothetical protein NCER_101483 [Nosema ceranae BRL01]
Length = 417
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 17/208 (8%)
Query: 89 EEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKS--NQPHT 146
E+ +VTFE I ++ PRG+ + L+ + R+ G + D KI Y +V +F L K+ +
Sbjct: 168 EDDLVTFEAITMVYPRGKNNFMLYKDYFRIIGYSYDHKIYYKNVKDIFFLEKNYISDQDK 227
Query: 147 FVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKD-KLEPSYKGLIHE 205
++ ++L+ PIR+G T Y IVL F E ++ D +LE Y GL+ +
Sbjct: 228 YIALSLETPIRQGLTKYYLIVLSF------------GNEEVDVDINDSRLEKRYNGLLSD 275
Query: 206 VFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHE 265
VF I L KF ++ +K + KA +G +YPL+ FLP+ + + +
Sbjct: 276 VFIDIFEHLVEVD-AITSKFITSDKRRGLKCTYKAYEGQIYPLDGCLIFLPRSIKINI-K 333
Query: 266 EIDYVEFERHAAGGSNMHYFDLLIRLKT 293
+I VEF R FD+ I +T
Sbjct: 334 DIFSVEFSRINVSSLQAKTFDMTISAET 361
>gi|6325309|ref|NP_015377.1| Nhp6ap [Saccharomyces cerevisiae S288c]
gi|128182|sp|P11632.1|NHP6A_YEAST RecName: Full=Non-histone chromosomal protein 6A
gi|24987379|pdb|1J5N|A Chain A, Solution Structure Of The Non-Sequence-Specific Hmgb
Protein Nhp6a In Complex With Sry Dna
gi|24987655|pdb|1LWM|A Chain A, Solution Structure Of The Sequence-Non-Specific Hmgb
Protein Nhp6a
gi|4034|emb|CAA33377.1| unnamed protein product [Saccharomyces cerevisiae]
gi|171883|gb|AAA34754.1| high mobility group non-histone protein [Saccharomyces cerevisiae]
gi|805034|emb|CAA89171.1| Nhp6ap [Saccharomyces cerevisiae]
gi|1314122|emb|CAA94998.1| Nhp6ap [Saccharomyces cerevisiae]
gi|51013911|gb|AAT93249.1| YPR052C [Saccharomyces cerevisiae]
gi|285815583|tpg|DAA11475.1| TPA: Nhp6ap [Saccharomyces cerevisiae S288c]
gi|392296063|gb|EIW07166.1| Nhp6ap [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 93
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 54/72 (75%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKRA+S ++FF+ R+ ++ NP I F VG+ LGE+WK ++ EE++PYE+KA+A
Sbjct: 17 DPNAPKRALSAYMFFANENRDIVRSENPDITFGQVGKKLGEKWKALTPEEKQPYEAKAQA 76
Query: 497 DKKRYKDEISGY 508
DKKRY+ E Y
Sbjct: 77 DKKRYESEKELY 88
>gi|151942838|gb|EDN61184.1| nonhistone chromosomal protein [Saccharomyces cerevisiae YJM789]
gi|190407991|gb|EDV11256.1| 11 kDa nonhistone chromosomal protein [Saccharomyces cerevisiae
RM11-1a]
gi|256268928|gb|EEU04275.1| Nhp6ap [Saccharomyces cerevisiae JAY291]
gi|259150205|emb|CAY87008.1| Nhp6ap [Saccharomyces cerevisiae EC1118]
gi|349581863|dbj|GAA27020.1| K7_Nhp6ap [Saccharomyces cerevisiae Kyokai no. 7]
Length = 93
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 54/72 (75%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKRA+S ++FF+ R+ ++ NP I F VG+ LGE+WK ++ EE++PYE+KA+A
Sbjct: 17 DPNAPKRALSAYMFFANENRDIVRSENPDITFGQVGKKLGEKWKALTPEEKQPYEAKAQA 76
Query: 497 DKKRYKDEISGY 508
DKKRY+ E Y
Sbjct: 77 DKKRYESEKELY 88
>gi|6435676|pdb|1CG7|A Chain A, Hmg Protein Nhp6a From Saccharomyces Cerevisiae
Length = 93
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 54/72 (75%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKRA+S ++FF+ R+ ++ NP I F VG+ LGE+WK ++ EE++PYE+KA+A
Sbjct: 17 DPNAPKRALSAYMFFANENRDIVRSENPDITFGQVGKKLGEKWKALTPEEKQPYEAKAQA 76
Query: 497 DKKRYKDEISGY 508
DKKRY+ E Y
Sbjct: 77 DKKRYESEKELY 88
>gi|401839076|gb|EJT42436.1| NHP6A-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 93
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 54/72 (75%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKRA+S ++FF+ R+ ++ NP I F VG+ LGE+WK ++ EE++PYE+KA+A
Sbjct: 17 DPNAPKRALSAYMFFANENRDIVRSENPDITFGQVGKKLGEKWKALTPEEKQPYEAKAQA 76
Query: 497 DKKRYKDEISGY 508
DKKRY+ E Y
Sbjct: 77 DKKRYESEKELY 88
>gi|302828472|ref|XP_002945803.1| hypothetical protein VOLCADRAFT_72419 [Volvox carteri f.
nagariensis]
gi|300268618|gb|EFJ52798.1| hypothetical protein VOLCADRAFT_72419 [Volvox carteri f.
nagariensis]
Length = 199
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 54/74 (72%)
Query: 436 KDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKAR 495
KDPNAPK+ ++ F++FS +R+ +K NPG++F +VG++LGE+WK + E+ YE KA+
Sbjct: 76 KDPNAPKKNLTAFMYFSNAQRDKVKTDNPGVSFGEVGKLLGEKWKSLGANEKSEYEEKAK 135
Query: 496 ADKKRYKDEISGYK 509
DK+RY E+ YK
Sbjct: 136 KDKERYAKEMEAYK 149
>gi|302652822|ref|XP_003018251.1| hypothetical protein TRV_07738 [Trichophyton verrucosum HKI 0517]
gi|291181876|gb|EFE37606.1| hypothetical protein TRV_07738 [Trichophyton verrucosum HKI 0517]
Length = 132
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 52/72 (72%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR +S ++ F+ +R +++ NP I F VG+VLGERWK +S ++R PYE KA
Sbjct: 60 DPNAPKRGLSAYMIFANEQRAAVREENPNITFGQVGKVLGERWKALSDKQRVPYEEKAAT 119
Query: 497 DKKRYKDEISGY 508
DK+RY+DE + Y
Sbjct: 120 DKQRYEDEKAAY 131
>gi|156843619|ref|XP_001644876.1| hypothetical protein Kpol_1065p34 [Vanderwaltozyma polyspora DSM
70294]
gi|156115528|gb|EDO17018.1| hypothetical protein Kpol_1065p34 [Vanderwaltozyma polyspora DSM
70294]
Length = 93
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 55/72 (76%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKRA+S ++FF+ R+ +K NP ++F VGR+LGE+WK M+ E+++P+++KA A
Sbjct: 17 DPNAPKRALSAYMFFANETRDIVKAENPDVSFGQVGRILGEKWKAMTDEDKQPFDAKAEA 76
Query: 497 DKKRYKDEISGY 508
DKKRY+ E Y
Sbjct: 77 DKKRYESEKELY 88
>gi|322699087|gb|EFY90852.1| nucleosome binding protein [Metarhizium acridum CQMa 102]
gi|322708956|gb|EFZ00533.1| nucleosome binding protein [Metarhizium anisopliae ARSEF 23]
Length = 92
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 53/69 (76%)
Query: 441 PKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKR 500
PKR +S ++FF+ +REN++ NP I F VG+VLGERWK ++ ++R PYE+KA ADKKR
Sbjct: 18 PKRGLSAYMFFANEQRENVRAENPNITFGQVGKVLGERWKALNDKQRAPYEAKAAADKKR 77
Query: 501 YKDEISGYK 509
Y+DE + ++
Sbjct: 78 YEDEKAAFQ 86
>gi|365982187|ref|XP_003667927.1| hypothetical protein NDAI_0A05290 [Naumovozyma dairenensis CBS 421]
gi|343766693|emb|CCD22684.1| hypothetical protein NDAI_0A05290 [Naumovozyma dairenensis CBS 421]
Length = 93
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 59/81 (72%)
Query: 428 KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEER 487
K++ ++KKDPNAPKR +S ++FF+ R+ +K NP I F +G+VLG +WK+++ EE+
Sbjct: 8 KRRVVRRKKDPNAPKRGLSAYMFFANDNRDIVKAENPNITFGQIGKVLGAKWKELNDEEK 67
Query: 488 EPYESKARADKKRYKDEISGY 508
+PY+ KA ADKKRY+ E Y
Sbjct: 68 QPYQDKADADKKRYESEKELY 88
>gi|254580675|ref|XP_002496323.1| ZYRO0C15752p [Zygosaccharomyces rouxii]
gi|238939214|emb|CAR27390.1| ZYRO0C15752p [Zygosaccharomyces rouxii]
Length = 98
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 53/72 (73%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKRA+S ++FF+ R+ ++ NP + F VGR+LGE+WK ++ +E+ PYE+KA A
Sbjct: 17 DPNAPKRALSAYMFFANENRDIVRAENPDVTFGQVGRILGEKWKALTPDEKTPYEAKAEA 76
Query: 497 DKKRYKDEISGY 508
DKKRY+ E Y
Sbjct: 77 DKKRYESEKELY 88
>gi|341879743|gb|EGT35678.1| CBN-HMG-1.2 protein [Caenorhabditis brenneri]
Length = 235
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 62/88 (70%)
Query: 423 GDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKM 482
G ED +K+++ KKDP+APKRA+S F F+SQ +R I+ ++P V + LG+ WK++
Sbjct: 117 GGEDAMRKRKRAKKDPHAPKRALSAFFFYSQDKRPEIQSAHPDWKVGQVAQELGKMWKQV 176
Query: 483 SVEEREPYESKARADKKRYKDEISGYKN 510
S E ++ YE+KA+ADK RY DE+ YK+
Sbjct: 177 SQELKDSYEAKAQADKDRYADEMRNYKS 204
Score = 38.5 bits (88), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 446 SGFIFFSQMERENIKKSNPG--IAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKD 503
S + FF +M E KK P + T++ + E+WK M +E+ + A+ D +RY+
Sbjct: 52 SPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMVDDEKRRFYELAQKDAERYQA 111
Query: 504 EISGY 508
E++ Y
Sbjct: 112 EVAAY 116
>gi|384487819|gb|EIE79999.1| hypothetical protein RO3G_04704 [Rhizopus delemar RA 99-880]
Length = 99
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 52/67 (77%)
Query: 438 PNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARAD 497
PNAPKRA+S ++FFSQ RE + K NP F ++G++LG +WK+M+ EE++P+ KA AD
Sbjct: 27 PNAPKRALSAYMFFSQANREKVIKENPEAKFGEIGKILGAKWKEMTEEEKKPFVEKAEAD 86
Query: 498 KKRYKDE 504
KKRY+DE
Sbjct: 87 KKRYEDE 93
>gi|348680492|gb|EGZ20308.1| hypothetical protein PHYSODRAFT_285400 [Phytophthora sojae]
Length = 211
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 59/90 (65%), Gaps = 3/90 (3%)
Query: 419 KSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGER 478
K DGD +K +KKKD NAPKRA+S F+FFS RE +KK P +AF + +G R
Sbjct: 6 KRADGDHT---RKPRKKKDKNAPKRALSAFMFFSNDIRETVKKEMPELAFLQISSEIGRR 62
Query: 479 WKKMSVEEREPYESKARADKKRYKDEISGY 508
WKK+S EER PY+ A ADK+RY++E Y
Sbjct: 63 WKKISDEERRPYDELAAADKRRYQEEKEDY 92
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%)
Query: 433 KKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYES 492
+KKKDPNAPKRA+S + FF R+ ++ NP T++ +L ERW+ + ++R Y+
Sbjct: 105 RKKKDPNAPKRALSAYFFFCNDIRQEVRDENPNKKITEIATLLAERWRALPDKKRAKYQK 164
Query: 493 KARADKKRYKDEISGY 508
K +Y+ ++ Y
Sbjct: 165 MHEEAKVKYQQQMDAY 180
>gi|320580355|gb|EFW94578.1| high-mobility group non-histone chromosomal protein, putative
[Ogataea parapolymorpha DL-1]
Length = 91
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 54/72 (75%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR++S ++FF+ +R+ ++ NPGIAF +G++LGE+WK + + PYE+KA A
Sbjct: 15 DPNAPKRSLSAYMFFANEQRDIVRAENPGIAFGQIGKLLGEKWKALDEAGKAPYEAKAEA 74
Query: 497 DKKRYKDEISGY 508
DKKRY+ E S Y
Sbjct: 75 DKKRYELEKSEY 86
>gi|388582419|gb|EIM22724.1| hypothetical protein WALSEDRAFT_53977 [Wallemia sebi CBS 633.66]
Length = 137
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 52/69 (75%)
Query: 429 KKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEERE 488
KK K KKD NAPKRA+S +++ SQ R +KK NP I+F +VG+VLG +WK+MS EE++
Sbjct: 13 KKAAKPKKDENAPKRALSAYMYMSQEHRAEVKKENPNISFGEVGKVLGAKWKEMSAEEKK 72
Query: 489 PYESKARAD 497
PYE +A AD
Sbjct: 73 PYEEQAAAD 81
>gi|321259756|ref|XP_003194598.1| nonhistone protein 6 [Cryptococcus gattii WM276]
gi|317461070|gb|ADV22811.1| Nonhistone protein 6, putative [Cryptococcus gattii WM276]
Length = 110
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 58/79 (73%)
Query: 431 KQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPY 490
K++ KKDPN PKRA+S ++FF Q RE IK NP F DVG++LG +W++M+ E++PY
Sbjct: 18 KRRSKKDPNKPKRALSAYMFFVQDYRERIKAENPEATFGDVGKLLGIKWREMNENEKKPY 77
Query: 491 ESKARADKKRYKDEISGYK 509
E+KA+ADK+R E + YK
Sbjct: 78 EAKAKADKERADRENADYK 96
>gi|324526583|gb|ADY48692.1| High mobility group protein 1.2, partial [Ascaris suum]
Length = 248
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 62/97 (63%), Gaps = 1/97 (1%)
Query: 423 GDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKM 482
G ED +K+++ KKDPNAPKRA+S F FFS +R +++ +P V + LG WK +
Sbjct: 119 GGEDMLRKRKRVKKDPNAPKRALSAFFFFSHDKRPEVQQQHPEWKVGQVAQELGRYWKAL 178
Query: 483 SVEEREPYESKARADKKRYKDEISGYKNPKPMDIDSG 519
S EER YE KA DK+RY +E+ YK PK M++ G
Sbjct: 179 SDEERMVYERKALEDKERYAEEMRNYKQPK-MEMAPG 214
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 446 SGFIFFSQMERENIKKSNPG--IAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKD 503
S + FF +M E KK P + T++ + E+WK MS +E+ + A+ D +RY+
Sbjct: 54 SPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMSDDEKRRFFELAQKDAERYQA 113
Query: 504 EISGY 508
E++ Y
Sbjct: 114 EVAAY 118
>gi|401623234|gb|EJS41340.1| nhp6ap [Saccharomyces arboricola H-6]
Length = 93
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 53/72 (73%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKRA+S ++FF+ R+ ++ NP I F VG+ LGE+WK ++ EE+ PYE+KA+A
Sbjct: 17 DPNAPKRALSAYMFFANENRDIVRSENPDITFGQVGKKLGEKWKALTPEEKLPYEAKAQA 76
Query: 497 DKKRYKDEISGY 508
DKKRY+ E Y
Sbjct: 77 DKKRYESEKELY 88
>gi|58268918|ref|XP_571615.1| nonhistone protein 6 [Cryptococcus neoformans var. neoformans
JEC21]
gi|134112618|ref|XP_774852.1| hypothetical protein CNBF0170 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338818300|sp|P0CO25.1|NHP6_CRYNB RecName: Full=Non-histone chromosomal protein 6
gi|338818301|sp|P0CO24.1|NHP6_CRYNJ RecName: Full=Non-histone chromosomal protein 6
gi|50257500|gb|EAL20205.1| hypothetical protein CNBF0170 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227850|gb|AAW44308.1| nonhistone protein 6, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 116
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 57/78 (73%)
Query: 431 KQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPY 490
K++ KKDPN PKRA+S ++FF Q RE IK NP F DVG++LG +W++M+ E++PY
Sbjct: 18 KKRTKKDPNKPKRALSAYMFFVQDYRERIKTENPEATFGDVGKLLGIKWREMNENEKKPY 77
Query: 491 ESKARADKKRYKDEISGY 508
E+KA+ADK+R E + Y
Sbjct: 78 EAKAKADKERADRENADY 95
>gi|328856362|gb|EGG05484.1| hypothetical protein MELLADRAFT_31192 [Melampsora larici-populina
98AG31]
Length = 82
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 59/80 (73%)
Query: 429 KKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEERE 488
K++ K++KDPNAPKR +S ++FFSQ RE IK NP ++F ++GR+LG +WK + EE++
Sbjct: 1 KRRVKREKDPNAPKRPLSAYMFFSQDWRERIKTENPEVSFGEIGRLLGLKWKSLGEEEKK 60
Query: 489 PYESKARADKKRYKDEISGY 508
PYE A DKKR++ E + Y
Sbjct: 61 PYEDMACRDKKRHETEKAEY 80
>gi|405121060|gb|AFR95829.1| nonhistone protein 6 [Cryptococcus neoformans var. grubii H99]
Length = 116
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 57/78 (73%)
Query: 431 KQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPY 490
K++ KKDPN PKRA+S ++FF Q RE IK NP F DVG++LG +W++M+ E++PY
Sbjct: 18 KKRTKKDPNKPKRALSAYMFFVQDYRERIKAENPEATFGDVGKLLGIKWREMNENEKKPY 77
Query: 491 ESKARADKKRYKDEISGY 508
E+KA+ADK+R E + Y
Sbjct: 78 EAKAKADKERADRENADY 95
>gi|74638955|sp|Q9UVL1.1|NHP6_CANAL RecName: Full=Non-histone chromosomal protein 6
gi|6273391|gb|AAF06350.1|AF196333_1 nonhistone protein 6 [Candida albicans]
gi|238881668|gb|EEQ45306.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 92
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 56/72 (77%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DP+APKR++S ++FF+ R+ ++ NPGI+F VG++LGE+WK ++ E++ PYE+KA A
Sbjct: 15 DPDAPKRSLSAYMFFANENRDIVRAENPGISFGQVGKLLGEKWKALNSEDKLPYENKAEA 74
Query: 497 DKKRYKDEISGY 508
DKKRY+ E + Y
Sbjct: 75 DKKRYEKEKAEY 86
>gi|401885246|gb|EJT49369.1| nonhistone protein 6 [Trichosporon asahii var. asahii CBS 2479]
gi|406694772|gb|EKC98094.1| nonhistone protein 6 [Trichosporon asahii var. asahii CBS 8904]
Length = 108
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 57/84 (67%)
Query: 425 EDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSV 484
+D KK ++ KKDPN PKRA+S ++FF Q RE IK NP F VGR+LG +W++MS
Sbjct: 7 KDDKKVAKRGKKDPNKPKRALSAYMFFVQDWRERIKSENPDADFGSVGRLLGAKWQEMSA 66
Query: 485 EEREPYESKARADKKRYKDEISGY 508
E++PYE KA+ADK R E + Y
Sbjct: 67 SEKKPYEDKAQADKDRAAKEKAEY 90
>gi|241954210|ref|XP_002419826.1| high-mobility group non-histone chromosomal protein, putative
[Candida dubliniensis CD36]
gi|223643167|emb|CAX42041.1| high-mobility group non-histone chromosomal protein, putative
[Candida dubliniensis CD36]
Length = 92
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 56/72 (77%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DP+APKR++S ++FF+ R+ ++ NPGI+F VG++LGE+WK ++ E++ PYE+KA A
Sbjct: 15 DPDAPKRSLSAYMFFANENRDIVRAENPGISFGQVGKLLGEKWKALNSEDKLPYENKAEA 74
Query: 497 DKKRYKDEISGY 508
DKKRY+ E + Y
Sbjct: 75 DKKRYEKEKAEY 86
>gi|452988900|gb|EME88655.1| hypothetical protein MYCFIDRAFT_57980 [Pseudocercospora fijiensis
CIRAD86]
Length = 108
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 54/71 (76%)
Query: 438 PNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARAD 497
PN PKR +S ++FF+ +R+ ++ NPGI F +VG++LGE+WK + +++ PYE+KA AD
Sbjct: 27 PNMPKRGLSAYMFFANEQRDKVRDENPGIKFGEVGKMLGEKWKALGEKQKAPYEAKAAAD 86
Query: 498 KKRYKDEISGY 508
KKRY++E + Y
Sbjct: 87 KKRYEEEKAAY 97
>gi|302684321|ref|XP_003031841.1| hypothetical protein SCHCODRAFT_76744 [Schizophyllum commune H4-8]
gi|300105534|gb|EFI96938.1| hypothetical protein SCHCODRAFT_76744 [Schizophyllum commune H4-8]
Length = 114
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 62/92 (67%)
Query: 432 QKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYE 491
+K KKDPNAPKRA+S ++FFSQ RE +K NP +F ++G++LG +WK+M +E++PY
Sbjct: 22 RKAKKDPNAPKRALSAYMFFSQDWRERVKAENPDASFGELGKILGAKWKEMDEDEKKPYV 81
Query: 492 SKARADKKRYKDEISGYKNPKPMDIDSGNESD 523
+KA DK+R + + + Y K + +E D
Sbjct: 82 AKAAKDKERAEADKAAYDEKKSAEASEADEDD 113
>gi|149236976|ref|XP_001524365.1| hypothetical protein LELG_04337 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451900|gb|EDK46156.1| hypothetical protein LELG_04337 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 93
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 54/72 (75%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DP+APKR++S ++FF+ R+ ++ NPGI F VG++LGE+WK + E++ PYE+KA A
Sbjct: 16 DPDAPKRSLSAYMFFANENRDIVRAENPGITFGQVGKLLGEKWKALGSEDKVPYENKAEA 75
Query: 497 DKKRYKDEISGY 508
DKKRY+ E + Y
Sbjct: 76 DKKRYEKEKAEY 87
>gi|401402785|ref|XP_003881334.1| high mobility group protein, related [Neospora caninum Liverpool]
gi|325115746|emb|CBZ51301.1| high mobility group protein, related [Neospora caninum Liverpool]
Length = 94
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 59/83 (71%), Gaps = 2/83 (2%)
Query: 430 KKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGI--AFTDVGRVLGERWKKMSVEER 487
KK K KKDPNAPKR +S FIFFS+ +RE I + NP + +VG+++GE W K+S ++
Sbjct: 9 KKTKAKKDPNAPKRPLSAFIFFSKDKREEIIRKNPELKSKLAEVGKMVGEAWGKLSDAQK 68
Query: 488 EPYESKARADKKRYKDEISGYKN 510
+PYESKA ADK RY+ E+ YK
Sbjct: 69 KPYESKAVADKARYEREMIAYKK 91
>gi|391638|dbj|BAA03261.1| ORF1 [Gallus gallus]
Length = 298
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 104/222 (46%), Gaps = 46/222 (20%)
Query: 310 LFDFISGKGLKIMNLGDMKTTDGVAAVLQE---DDDDAVDPHLERIKNEAGGDESDEEDS 366
DF++ K L I N G +G+ E D+D D +LER+K E E + DS
Sbjct: 3 TVDFVNAKKLNIKNRG---LKEGMKQSYDEYADSDEDQHDAYLERMKEEGKIREENANDS 59
Query: 367 DFVADKDDGGSPTDDS---GEEDSDASE-----------------SGGEKEKPAKKESKK 406
D G TD+S GEED D +E GEK KPAKK
Sbjct: 60 S-----DGSGEETDESFNPGEEDDDVAEEFDSNASASSSSGDGDSDRGEK-KPAKK---- 109
Query: 407 ESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGI 466
+ VK +KK + KK KDPNAPKR MS ++ + RE IK +PGI
Sbjct: 110 -AKIVKDRKPRKKQVES---------KKGKDPNAPKRPMSAYMLWLNANREKIKSDHPGI 159
Query: 467 AFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGY 508
+ TD+ + GE WK MS E++E ++ KA K+ Y+ + Y
Sbjct: 160 SITDLSKKAGELWKAMSKEKKEEWDRKAEDAKRDYEKAMKEY 201
>gi|159476440|ref|XP_001696319.1| high mobility group protein [Chlamydomonas reinhardtii]
gi|158282544|gb|EDP08296.1| high mobility group protein [Chlamydomonas reinhardtii]
Length = 179
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 55/72 (76%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPK+ ++ F++FS RE++K NPGIAF +VG+V+GE+WK +S ++++ Y+ KA
Sbjct: 57 DPNAPKKPLTSFMYFSNAIRESVKSENPGIAFGEVGKVIGEKWKGLSADDKKEYDEKAAK 116
Query: 497 DKKRYKDEISGY 508
DK+RY+ E+ Y
Sbjct: 117 DKERYQKEMESY 128
>gi|409075858|gb|EKM76234.1| hypothetical protein AGABI1DRAFT_16670, partial [Agaricus bisporus
var. burnettii JB137-S8]
gi|426193694|gb|EKV43627.1| hypothetical protein AGABI2DRAFT_56560, partial [Agaricus bisporus
var. bisporus H97]
Length = 106
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 60/93 (64%), Gaps = 8/93 (8%)
Query: 432 QKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYE 491
+K KKDP APKRA+S ++FFSQ RE IK NP F +VG++LG +WK+M EE++PY
Sbjct: 14 RKSKKDPKAPKRALSAYMFFSQDWRERIKTENPEAGFGEVGKLLGAKWKEMDEEEKKPYV 73
Query: 492 SKARADKKRYKDEISGYKNPKPMDIDSGNESDS 524
+A ADK R + E + Y DSG +S S
Sbjct: 74 EQATADKTRAEKEKASY--------DSGKKSAS 98
>gi|353239969|emb|CCA71859.1| NHP6A-Nonhistone chromosomal protein related to mammalian HMG1
[Piriformospora indica DSM 11827]
Length = 106
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 51/72 (70%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DP+APK+A+S ++FF+Q RE IK NPGI F +V + LG +WK M+ EE+EPY K +A
Sbjct: 17 DPHAPKKALSPYMFFTQEWREKIKDENPGIGFGEVAKRLGAKWKSMTDEEKEPYVQKHQA 76
Query: 497 DKKRYKDEISGY 508
DKKR DE Y
Sbjct: 77 DKKRADDEKEAY 88
>gi|50421411|ref|XP_459256.1| DEHA2D17710p [Debaryomyces hansenii CBS767]
gi|74631679|sp|Q6BRB4.1|NHP6_DEBHA RecName: Full=Non-histone chromosomal protein 6
gi|49654923|emb|CAG87430.1| DEHA2D17710p [Debaryomyces hansenii CBS767]
Length = 92
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 55/72 (76%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DP+APKR++S ++FF+ R+ ++ NPGI+F VG++LGE+WK ++ E++ PYE+KA
Sbjct: 15 DPDAPKRSLSAYMFFANENRDIVRAENPGISFGQVGKLLGEKWKALTPEDKIPYENKADT 74
Query: 497 DKKRYKDEISGY 508
DKKRY+ E + Y
Sbjct: 75 DKKRYEKEKAEY 86
>gi|413943885|gb|AFW76534.1| hypothetical protein ZEAMMB73_585681 [Zea mays]
Length = 280
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/81 (66%), Positives = 63/81 (77%), Gaps = 3/81 (3%)
Query: 310 LFDFI-SGKGLKIMNLG-DMKTTDGVAA-VLQEDDDDAVDPHLERIKNEAGGDESDEEDS 366
+FD + SG +KIMNLG D + GV VL+ DDDAVDPHLERIKN+AG +ESDEED
Sbjct: 195 IFDILFSGNNIKIMNLGGDGQGASGVITDVLRNTDDDAVDPHLERIKNQAGDEESDEEDE 254
Query: 367 DFVADKDDGGSPTDDSGEEDS 387
DFVADKDD GSPTDDSG+E+
Sbjct: 255 DFVADKDDSGSPTDDSGDEEC 275
>gi|392563521|gb|EIW56700.1| HMG-box [Trametes versicolor FP-101664 SS1]
gi|392563525|gb|EIW56704.1| HMG-box [Trametes versicolor FP-101664 SS1]
gi|392563535|gb|EIW56714.1| HMG-box [Trametes versicolor FP-101664 SS1]
Length = 116
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%)
Query: 412 KASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDV 471
K +T K R + K K K KKDP APKRA+S ++FFSQ RE IK NP F ++
Sbjct: 3 KETTKTTKRRAATKQDKAPKAKGKKDPKAPKRALSAYMFFSQDWRERIKAENPDAGFGEI 62
Query: 472 GRVLGERWKKMSVEEREPYESKARADKKRYKDEISGY 508
G++LG +WK++ +E++PY +A ADK R ++E + Y
Sbjct: 63 GKLLGAKWKELDDDEKKPYLDQAAADKSRAEEEKNAY 99
>gi|17553928|ref|NP_498375.1| Protein HMG-1.2, isoform a [Caenorhabditis elegans]
gi|21903502|sp|Q09390.2|HMG12_CAEEL RecName: Full=High mobility group protein 1.2
gi|3702828|gb|AAC78599.1| high mobility group protein 1.2 [Caenorhabditis elegans]
gi|373219052|emb|CCD83369.1| Protein HMG-1.2, isoform a [Caenorhabditis elegans]
Length = 235
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 57/87 (65%)
Query: 423 GDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKM 482
G ED +K+++ KKDP+APKRA+S F F+SQ +R I+ +P V + LG+ WK +
Sbjct: 117 GGEDAMRKRKRAKKDPHAPKRALSAFFFYSQDKRPEIQAGHPDWKVGQVAQELGKMWKLV 176
Query: 483 SVEEREPYESKARADKKRYKDEISGYK 509
E ++ YE KA+ADK RY DE+ YK
Sbjct: 177 PQETKDMYEQKAQADKDRYADEMRNYK 203
>gi|440800724|gb|ELR21759.1| HMG (high mobility group) box domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 128
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 52/74 (70%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR +G+IFFS ER +K+ NP + F D+ + + +WK MS EE+EPY + A+
Sbjct: 28 DPNAPKRPKTGYIFFSAEERVKVKEDNPDLGFGDITKQVSAKWKDMSEEEKEPYLTLAKK 87
Query: 497 DKKRYKDEISGYKN 510
DK+RY+ E+S YK
Sbjct: 88 DKERYEKEMSKYKT 101
>gi|71986268|ref|NP_001022599.1| Protein HMG-1.2, isoform b [Caenorhabditis elegans]
gi|373219053|emb|CCD83370.1| Protein HMG-1.2, isoform b [Caenorhabditis elegans]
Length = 234
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 57/87 (65%)
Query: 423 GDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKM 482
G ED +K+++ KKDP+APKRA+S F F+SQ +R I+ +P V + LG+ WK +
Sbjct: 116 GGEDAMRKRKRAKKDPHAPKRALSAFFFYSQDKRPEIQAGHPDWKVGQVAQELGKMWKLV 175
Query: 483 SVEEREPYESKARADKKRYKDEISGYK 509
E ++ YE KA+ADK RY DE+ YK
Sbjct: 176 PQETKDMYEQKAQADKDRYADEMRNYK 202
>gi|71986275|ref|NP_001022600.1| Protein HMG-1.2, isoform c [Caenorhabditis elegans]
gi|373219054|emb|CCD83371.1| Protein HMG-1.2, isoform c [Caenorhabditis elegans]
Length = 233
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 57/87 (65%)
Query: 423 GDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKM 482
G ED +K+++ KKDP+APKRA+S F F+SQ +R I+ +P V + LG+ WK +
Sbjct: 115 GGEDAMRKRKRAKKDPHAPKRALSAFFFYSQDKRPEIQAGHPDWKVGQVAQELGKMWKLV 174
Query: 483 SVEEREPYESKARADKKRYKDEISGYK 509
E ++ YE KA+ADK RY DE+ YK
Sbjct: 175 PQETKDMYEQKAQADKDRYADEMRNYK 201
Score = 38.5 bits (88), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 446 SGFIFFSQMERENIKKSNPG--IAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKD 503
S + FF +M E KK P + T++ + E+WK M +E+ + A+ D +RY+
Sbjct: 50 SPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMVDDEKRRFYELAQKDAERYQA 109
Query: 504 EISGY 508
E++ Y
Sbjct: 110 EVAAY 114
>gi|412986109|emb|CCO17309.1| nucleosome binding protein [Bathycoccus prasinos]
Length = 725
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 56/81 (69%)
Query: 431 KQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPY 490
++K+KKDP+APK A S +I F + ER NI K NP +A T++ LG+RWK +S +E++PY
Sbjct: 557 QKKRKKDPSAPKGAKSAYICFCEKERANIAKDNPNLAATEIMTELGKRWKALSDKEKKPY 616
Query: 491 ESKARADKKRYKDEISGYKNP 511
E +A D+ R+ + + Y+ P
Sbjct: 617 EKQAETDRARFNEAMKNYEPP 637
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 3/85 (3%)
Query: 425 EDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSV 484
+D +K+ +++KKDP+APK A S +I F +R I K A DV LG+ W SV
Sbjct: 640 DDDEKQGKRRKKDPDAPKNAKSAYIIFCAAKRSTIPKET---APKDVMSKLGQMWSATSV 696
Query: 485 EEREPYESKARADKKRYKDEISGYK 509
+++PYE +R DK RY+ E++ YK
Sbjct: 697 ADKKPYEDLSRKDKVRYEKEMAKYK 721
>gi|397640346|gb|EJK74071.1| hypothetical protein THAOC_04277 [Thalassiosira oceanica]
Length = 337
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 58/87 (66%), Gaps = 2/87 (2%)
Query: 425 EDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKK--SNPGIAFTDVGRVLGERWKKM 482
E + +KQKK+KDPN PKR S ++FF+ ER I K ++P + FTD+G +LGERW+++
Sbjct: 192 ESSRSRKQKKRKDPNLPKRPRSSYVFFTSEERPKILKEFNDPPLKFTDIGYILGERWREL 251
Query: 483 SVEEREPYESKARADKKRYKDEISGYK 509
E R+ YE A DK R++ E+ YK
Sbjct: 252 KPERRKKYEGMAEGDKLRHEREMKEYK 278
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%)
Query: 416 SKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVL 475
S+ S G + ++ K +DP AP++ +S ++FF +R NPG+ F ++ R
Sbjct: 86 SRGNSMAGSFSNRARRSKADRDPRAPRKNISAYLFFQNEKRSEFAAENPGMEFGELTRFT 145
Query: 476 GERWKKMSVEEREPYESKARADKKRYKDEISGYKNPKPMD 515
+ + EER+ +E KA+ DK RY+ E Y P+ D
Sbjct: 146 SRMYHSLPKEERKVWEEKAKQDKVRYESEKGKYVPPEGHD 185
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 45/80 (56%)
Query: 436 KDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKAR 495
+DP APK+++S ++ F RE + NP + ++ + + K+ ++++ ++ +A
Sbjct: 6 RDPQAPKKSLSAYMLFQSAHREAYRIQNPTWSIGEIAKHASAEYSKLPADQKDAWDRRAD 65
Query: 496 ADKKRYKDEISGYKNPKPMD 515
AD++RY DE+ Y P D
Sbjct: 66 ADRQRYADEMKTYIPPPGYD 85
>gi|342319487|gb|EGU11435.1| Non-histone chromosomal protein [Rhodotorula glutinis ATCC 204091]
Length = 142
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 59/88 (67%), Gaps = 9/88 (10%)
Query: 433 KKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFT-------DVGRVLGERWKKMSVE 485
+ KKDPNAPKR +S ++ FSQ +R +K+ NP + F ++G++LG +WK++ +
Sbjct: 17 RAKKDPNAPKRPLSAYMHFSQDQRSVVKEENPDVTFVGHCESIGEIGKILGAKWKELPED 76
Query: 486 EREPYESKARADKKRYKDEISGY--KNP 511
ER+PYE KA ADK RY+ E + Y +NP
Sbjct: 77 ERKPYEEKASADKSRYEKEKAAYDAENP 104
>gi|308499102|ref|XP_003111737.1| CRE-HMG-1.2 protein [Caenorhabditis remanei]
gi|308239646|gb|EFO83598.1| CRE-HMG-1.2 protein [Caenorhabditis remanei]
Length = 238
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 59/88 (67%)
Query: 423 GDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKM 482
G ED +K+++ KKDP+APKRA+S F F+SQ +R I+ ++P V + LG+ WK +
Sbjct: 119 GGEDAMRKRKRAKKDPHAPKRALSAFFFYSQDKRPEIQSAHPDWKVGQVAQELGKMWKLV 178
Query: 483 SVEEREPYESKARADKKRYKDEISGYKN 510
E ++ YE KA+ADK RY +E+ YK+
Sbjct: 179 PQETKDLYEQKAQADKDRYAEEMRHYKS 206
>gi|25395797|pir||E88479 protein F47D12.4 [imported] - Caenorhabditis elegans
Length = 202
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 57/87 (65%)
Query: 423 GDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKM 482
G ED +K+++ KKDP+APKRA+S F F+SQ +R I+ +P V + LG+ WK +
Sbjct: 84 GGEDAMRKRKRAKKDPHAPKRALSAFFFYSQDKRPEIQAGHPDWKVGQVAQELGKMWKLV 143
Query: 483 SVEEREPYESKARADKKRYKDEISGYK 509
E ++ YE KA+ADK RY DE+ YK
Sbjct: 144 PQETKDMYEQKAQADKDRYADEMRNYK 170
>gi|392558113|gb|EIW51341.1| hypothetical protein TRAVEDRAFT_80819, partial [Trametes versicolor
FP-101664 SS1]
Length = 91
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 55/78 (70%)
Query: 431 KQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPY 490
K K KKDP APKRA+S ++FFSQ RE IK NP F ++G++LG +WK++ +E++PY
Sbjct: 13 KAKGKKDPKAPKRALSAYMFFSQDWRERIKAENPDAGFGEIGKLLGAKWKELDDDEKKPY 72
Query: 491 ESKARADKKRYKDEISGY 508
+A ADK R ++E + Y
Sbjct: 73 LDQAAADKSRAEEEKNAY 90
>gi|395326844|gb|EJF59249.1| hypothetical protein DICSQDRAFT_109066 [Dichomitus squalens
LYAD-421 SS1]
Length = 117
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 54/78 (69%)
Query: 431 KQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPY 490
K K KKDP APKRA+S ++FFSQ RE IK NP F ++G++LG +WK++ EE++PY
Sbjct: 22 KAKGKKDPKAPKRALSAYMFFSQDWRERIKAENPDAGFGEIGKLLGAKWKELDDEEKKPY 81
Query: 491 ESKARADKKRYKDEISGY 508
+A ADK R + E + Y
Sbjct: 82 LDQAAADKARAEQEKNDY 99
>gi|397631195|gb|EJK70063.1| hypothetical protein THAOC_08612 [Thalassiosira oceanica]
Length = 827
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 55/76 (72%)
Query: 430 KKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREP 489
K++KKK+DPNAPK S ++FF+ +R IK++NP F D+ ++LG+ +K++S E+EP
Sbjct: 588 KQKKKKRDPNAPKAPKSAYVFFTSAKRSEIKEANPDAGFGDISKLLGKAYKELSDAEKEP 647
Query: 490 YESKARADKKRYKDEI 505
Y+ AR DK RYK E+
Sbjct: 648 YDEMARKDKARYKREM 663
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 9/91 (9%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDV---------GRVLGERWKKMSVEER 487
DPNAPK+ M+ F+ +S R+ IK+ NP + D+ + G +++ ++ EE+
Sbjct: 695 DPNAPKKPMNAFMLYSNSIRQKIKEENPDMKVGDITYADPFFLQSKECGIKYRALNEEEK 754
Query: 488 EPYESKARADKKRYKDEISGYKNPKPMDIDS 518
+ + +KA A K++YK E + Y+ KP DS
Sbjct: 755 KKWTAKADAAKEKYKVEFAQYEKTKPKTGDS 785
>gi|268571579|ref|XP_002641089.1| C. briggsae CBR-HMG-1.2 protein [Caenorhabditis briggsae]
Length = 239
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 58/88 (65%)
Query: 423 GDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKM 482
G ED +K+++ KKDP+APKRA+S F F+SQ +R I+ +P V + LG+ WK +
Sbjct: 119 GGEDAMRKRKRAKKDPHAPKRALSAFFFYSQDKRPEIQGQHPDWKVGQVAQELGKMWKLV 178
Query: 483 SVEEREPYESKARADKKRYKDEISGYKN 510
E ++ YE+KA+ADK RY +E+ YK
Sbjct: 179 PQETKDAYETKAQADKDRYAEEMRHYKQ 206
>gi|170591488|ref|XP_001900502.1| High mobility group protein 1.2 [Brugia malayi]
gi|158592114|gb|EDP30716.1| High mobility group protein 1.2, putative [Brugia malayi]
Length = 235
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 55/87 (63%)
Query: 423 GDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKM 482
G ED +K+++ KKDPNAPKRA+S F FFS +R +++ +P V + LG WK +
Sbjct: 97 GGEDALRKRKRVKKDPNAPKRALSAFFFFSHDKRPEVQQQHPEWKVGQVAQELGRFWKAL 156
Query: 483 SVEEREPYESKARADKKRYKDEISGYK 509
EER YE KA DK+RY +E+ YK
Sbjct: 157 GEEERAVYERKALEDKERYAEEMRNYK 183
Score = 38.9 bits (89), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 446 SGFIFFSQMERENIKKSNPG--IAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKD 503
S + FF +M E KK P + T++ + E+WK MS +E+ + A+ D +RY+
Sbjct: 32 SPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMSDDEKRRFFELAQKDAERYQA 91
Query: 504 EISGY 508
E++ Y
Sbjct: 92 EVAAY 96
>gi|440799045|gb|ELR20106.1| HMG (high mobility group) box domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 143
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 53/79 (67%)
Query: 430 KKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREP 489
KK KK+KDPNAPKRA + +I F+ ER K NP + F D+ + + ++WK +S +E+ P
Sbjct: 42 KKGKKEKDPNAPKRAKTAYIIFATEERPRAKADNPELGFGDLTKCVSDKWKALSDDEKAP 101
Query: 490 YESKARADKKRYKDEISGY 508
Y KA DK+RY DE+S Y
Sbjct: 102 YLEKAAQDKERYADEVSKY 120
>gi|301097589|ref|XP_002897889.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262106637|gb|EEY64689.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 210
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 55/79 (69%)
Query: 430 KKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREP 489
+K +KKKD NAPKRA+S F+FFS R+ +KK P + F ++ +G RWK++S E+R P
Sbjct: 18 RKPRKKKDKNAPKRALSAFMFFSNDIRDTVKKEMPDLQFLEISSEIGRRWKQISDEDRRP 77
Query: 490 YESKARADKKRYKDEISGY 508
Y+ A ADK+RY++E Y
Sbjct: 78 YDELAAADKRRYQEEKEDY 96
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 45/76 (59%)
Query: 433 KKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYES 492
+KKKDPNAPKRA+S + FF R+ ++ NP T++ +L E+W+ + ++R Y+
Sbjct: 109 RKKKDPNAPKRALSAYFFFCNDIRQEVRDENPNKKITEIATLLAEKWRALPDKKRAKYQK 168
Query: 493 KARADKKRYKDEISGY 508
K +Y+ ++ Y
Sbjct: 169 MNEEAKVKYQQQMDVY 184
>gi|440804471|gb|ELR25348.1| HMG (high mobility group) box domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 205
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 58/86 (67%)
Query: 424 DEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMS 483
DE+ + K++KKKDPNAPK+ S F FS+ R IK NP +F +G+++GE+W K+
Sbjct: 88 DEEERPAKKRKKKDPNAPKKPCSAFFHFSKKMRPRIKDENPDASFGQLGKIIGEQWSKLG 147
Query: 484 VEEREPYESKARADKKRYKDEISGYK 509
+ER+ +E+ A ADK+RY E+ Y+
Sbjct: 148 ADERKEFETLAAADKERYAKEMKDYQ 173
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 52/86 (60%)
Query: 432 QKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYE 491
++K+KDPNAPKRAM+ ++ FSQ +R IK +P + F VG++LGE W + ++ Y
Sbjct: 3 RRKRKDPNAPKRAMTAYMLFSQEKRTQIKTDHPTVGFGQVGKLLGEAWAALPDGDKRKYN 62
Query: 492 SKARADKKRYKDEISGYKNPKPMDID 517
A DK RY+ E + YK P D
Sbjct: 63 ELAAKDKIRYQKEAAQYKEDHPESSD 88
>gi|422294533|gb|EKU21833.1| nucleosome binding protein, partial [Nannochloropsis gaditana
CCMP526]
Length = 195
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 51/72 (70%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPK+A+S ++ F+Q RE +K PG+ T++ +V+GERW+ +S EE++ +E +A +
Sbjct: 33 DPNAPKQALSAYMLFTQASREAVKAEQPGLKVTEISKVMGERWRALSAEEKKVFEDQAAS 92
Query: 497 DKKRYKDEISGY 508
K RY +E+ Y
Sbjct: 93 AKVRYGEELRAY 104
>gi|312075672|ref|XP_003140521.1| high mobility group protein 1.2 [Loa loa]
gi|307764316|gb|EFO23550.1| high mobility group protein 1.2 [Loa loa]
Length = 211
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 55/87 (63%)
Query: 423 GDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKM 482
G ED +K+++ KKDPNAPKRA+S F FFS +R +++ +P V + LG WK +
Sbjct: 79 GGEDALRKRKRVKKDPNAPKRALSAFFFFSHDKRPEVQQQHPEWKVGQVAQELGRFWKAL 138
Query: 483 SVEEREPYESKARADKKRYKDEISGYK 509
EER YE KA DK+RY +E+ YK
Sbjct: 139 GEEERAVYERKALEDKERYAEEMRNYK 165
Score = 38.9 bits (89), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 446 SGFIFFSQMERENIKKSNPG--IAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKD 503
S + FF +M E KK P + T++ + E+WK MS +E+ + A+ D +RY+
Sbjct: 14 SPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMSDDEKRRFFELAQKDAERYQA 73
Query: 504 EISGY 508
E++ Y
Sbjct: 74 EVAAY 78
>gi|82706005|ref|XP_727203.1| structure-specific recognition protein 1 [Plasmodium yoelii yoelii
17XNL]
gi|23482931|gb|EAA18768.1| structure-specific recognition protein 1 [Plasmodium yoelii yoelii]
Length = 198
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 75/140 (53%), Gaps = 6/140 (4%)
Query: 194 KLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFF 253
KLE + G ++V T + L+ PG +R+A++ + + S +A G LYPL K F
Sbjct: 20 KLEKTLTGKAYDVVTRLFTALAKKNAIIPGDYRTAKNEHGITCSYRAASGQLYPLNKYFL 79
Query: 254 FLPKPPTLILHEEIDYVEFERHAAGGSNMH-YFDLLIRLKTEQEHLFRNIQRNEYHNLFD 312
F+ KP LI ++I + F+R G N H +F L+I+ K + + NI ++EY L +
Sbjct: 80 FVVKPVILISFDDIVTLSFQR--TGNINQHRFFSLIIKHKRGISYEYTNIDKSEYAPLLE 137
Query: 313 FISGKGLKIM---NLGDMKT 329
F+ K L I N+ + KT
Sbjct: 138 FLKSKNLNIQDDANVSEKKT 157
>gi|393219482|gb|EJD04969.1| HMG-box [Fomitiporia mediterranea MF3/22]
Length = 114
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 52/76 (68%)
Query: 433 KKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYES 492
K KKDPNAPKRA+S ++FFSQ RE +K NP F +VG++LG +WK+M E+ PY
Sbjct: 25 KGKKDPNAPKRALSAYMFFSQDWRERVKAENPDAGFGEVGKLLGAKWKEMDESEKRPYIE 84
Query: 493 KARADKKRYKDEISGY 508
+A DK R ++E + Y
Sbjct: 85 QAARDKARAEEEKANY 100
>gi|440794204|gb|ELR15371.1| HMG (high mobility group) box domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 193
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 52/72 (72%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPK+A+S ++FF+Q R+ +KK NP F ++G++LG++W K S ++ YE+KA
Sbjct: 106 DPNAPKKALSAYMFFAQANRDKVKKENPDATFGELGKLLGKQWSKASKSDKAKYEAKANK 165
Query: 497 DKKRYKDEISGY 508
DK+RY+ E + Y
Sbjct: 166 DKERYEKEKAKY 177
>gi|388854657|emb|CCF51814.1| probable NHP6B-nonhistone chromosomal protein [Ustilago hordei]
Length = 99
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 48/70 (68%)
Query: 428 KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEER 487
+K+ K KKDP APKR +S ++FFSQ +RE +K NP F DVGR+LG RWK+MS E+
Sbjct: 15 QKRTTKSKKDPAAPKRPLSAYMFFSQDQRERVKADNPEAGFGDVGRLLGARWKEMSDAEK 74
Query: 488 EPYESKARAD 497
+PY A D
Sbjct: 75 KPYNDMANRD 84
>gi|325181279|emb|CCA15692.1| high mobility group protein putative [Albugo laibachii Nc14]
Length = 231
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 425 EDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIA-FTDVGRVLGERWKKMS 483
E GKK+K+ +KK P APKR S +I FS +RE IK P A TDV R + + W KMS
Sbjct: 21 EKGKKRKRLQKKAPGAPKRGKSPYILFSMDKREEIKSHMPADAKVTDVMRAIADAWSKMS 80
Query: 484 VEEREPYESKARADKKRYKDEISGYKNP 511
+E++P++S A DK+RY++E++ Y P
Sbjct: 81 EDEKQPWKSAAEVDKQRYEEEMASYDGP 108
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 51/77 (66%)
Query: 432 QKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYE 491
++ KKDP+APKRA S F+F+SQ+ R +KK NP + TD+ + LGE W K + ++ PY
Sbjct: 114 KRAKKDPSAPKRASSAFLFYSQVMRPQLKKENPDLKNTDISKRLGEAWSKATDVQKAPYV 173
Query: 492 SKARADKKRYKDEISGY 508
K R D+ RYK E+ +
Sbjct: 174 EKEREDRSRYKREMEEW 190
>gi|347962987|ref|XP_311155.4| AGAP000005-PA [Anopheles gambiae str. PEST]
gi|333467412|gb|EAA06432.5| AGAP000005-PA [Anopheles gambiae str. PEST]
Length = 457
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 52/83 (62%)
Query: 427 GKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEE 486
G+ KK+K+ KDPNAPKR++S F +F ER +K NP D+ + LG +W M E
Sbjct: 297 GRGKKRKQFKDPNAPKRSLSAFFWFCHDERNKVKALNPEYGVGDIAKELGRKWSDMDAEI 356
Query: 487 REPYESKARADKKRYKDEISGYK 509
++ YE A DK+RY+ E++ YK
Sbjct: 357 KQKYEQMAEKDKQRYEQEMTEYK 379
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 439 NAPKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
N P+ M+ + FF Q RE KK +P + F + R ERWK M +E++ + A
Sbjct: 217 NKPRGRMTAYAFFVQTCREEHKKKHPEEQVIFAEFSRKCAERWKTMLDKEKQRFHEMAEK 276
Query: 497 DKKRYKDEISGYKNPKPMDIDSG 519
DK RY+ E+ Y PK + G
Sbjct: 277 DKARYELEMQSYVPPKGAVVGRG 299
>gi|154318369|ref|XP_001558503.1| hypothetical protein BC1G_03352 [Botryotinia fuckeliana B05.10]
gi|347837613|emb|CCD52185.1| similar to transcription factor HMG [Botryotinia fuckeliana]
Length = 224
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 55/78 (70%)
Query: 432 QKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYE 491
Q K+KDP+APKR +S ++F++ + + +++ NP ++F +G +LGE W+ +SV +R YE
Sbjct: 146 QNKRKDPSAPKRGISAYMFYANDQHDRVRQENPALSFGQLGILLGEEWRALSVGQRSVYE 205
Query: 492 SKARADKKRYKDEISGYK 509
A D +RY++E++ Y+
Sbjct: 206 EMATKDLRRYEEELARYR 223
>gi|223994915|ref|XP_002287141.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976257|gb|EED94584.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 85
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 53/80 (66%)
Query: 429 KKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEERE 488
+K KK KDP+APKRA F++F+ R I K PGI FT++G +GERW+ ++ +E++
Sbjct: 1 RKYNKKNKDPDAPKRARGSFVYFTFECRPQIMKEQPGIKFTELGTAMGERWRALTPDEKK 60
Query: 489 PYESKARADKKRYKDEISGY 508
YE A DKKR+ DE+ Y
Sbjct: 61 KYEDLAEEDKKRFDDEMQEY 80
>gi|339250984|ref|XP_003372975.1| high mobility group protein 1.2 [Trichinella spiralis]
gi|316969210|gb|EFV53345.1| high mobility group protein 1.2 [Trichinella spiralis]
Length = 599
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 50/79 (63%)
Query: 423 GDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKM 482
G ED +K+++ KKDPNAPKRA+S F FFS ER ++KS+P + + LG WK +
Sbjct: 78 GGEDALRKRKRNKKDPNAPKRALSAFFFFSHAERPEVQKSHPDWKVGQLAQELGRMWKAL 137
Query: 483 SVEEREPYESKARADKKRY 501
+ E++ YE A DK RY
Sbjct: 138 NDEQKRKYEEMAIKDKARY 156
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 436 KDPNAPKRAMSGFIFFSQMERENIKKSNPG--IAFTDVGRVLGERWKKMSVEEREPYESK 493
++ P+ S + FF +M E KK P + T++ + E+WK M+ +E++ +
Sbjct: 3 REAGKPRGKTSPYGFFVKMCYEEHKKKYPSENVQVTEISKKCSEKWKTMTQQEKQRFYEL 62
Query: 494 ARADKKRYKDEISGY 508
A+ D++RY+ E++ +
Sbjct: 63 AQKDRERYQAEVAAF 77
>gi|403224274|dbj|BAM42404.1| structure-specific recognition protein 1 [Theileria orientalis
strain Shintoku]
Length = 934
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 99/218 (45%), Gaps = 48/218 (22%)
Query: 156 IRKGQTLYPHIVLQFETDYVVQSELLMSE-ELLNTKYKDKLE--PSY------------- 199
+R+GQT Y +IV+QFE D+ + +L + E ++ K LE SY
Sbjct: 1 MRQGQTRYSYIVMQFEADHETKVDLNLQENDMKQFKLDKTLEGKASYIEAYSHTSTRATF 60
Query: 200 -----KGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFF 254
G + V + + L I PG F+S + A+ + KA G L+PL +SF F
Sbjct: 61 VNECPLGKTYNVISRLFGSLVNRSIVVPGDFKSEKGDSAISCTYKATSGHLFPLNRSFLF 120
Query: 255 LPKP---------PTL-----------------ILHEEIDYVEFERHAAGGSNMHYFDLL 288
+ KP PTL +L E+I VEF R N +F +L
Sbjct: 121 IVKPVIFIRWVLLPTLAIKLAPVPVDWAALTNAMLFEDIVSVEFSRTGVTTQN-RFFAIL 179
Query: 289 IRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGD 326
+ ++ E+ F NI ++EY L+D++ K +K++N D
Sbjct: 180 VSMRGAIEYEFTNIDKSEYKFLYDYLISKQVKVVNAED 217
>gi|443895134|dbj|GAC72480.1| HMG box-containing protein [Pseudozyma antarctica T-34]
Length = 99
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 49/70 (70%)
Query: 428 KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEER 487
+K+ K KKDP APKR +S ++FFSQ RE +K++NP F DVGR+LG +WK+MS E+
Sbjct: 15 QKRTTKSKKDPAAPKRPLSAYMFFSQDHRERVKQANPEAGFGDVGRLLGAKWKEMSEAEK 74
Query: 488 EPYESKARAD 497
+PY A D
Sbjct: 75 KPYNDMATRD 84
>gi|349604600|gb|AEQ00107.1| High mobility group protein B3-like protein, partial [Equus
caballus]
Length = 118
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%)
Query: 433 KKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYES 492
KKKKDPNAPKR SGF F R IK +NPGI+ DV + LGE W +S E++PY +
Sbjct: 2 KKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNN 61
Query: 493 KARADKKRYKDEISGYKN 510
KA K++Y+ +++ YK+
Sbjct: 62 KAAKLKEKYEKDVADYKS 79
>gi|299741148|ref|XP_001834261.2| non-histone chromosomal protein 6 [Coprinopsis cinerea
okayama7#130]
gi|298404577|gb|EAU87573.2| non-histone chromosomal protein 6 [Coprinopsis cinerea
okayama7#130]
Length = 184
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 52/76 (68%)
Query: 433 KKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYES 492
K KKDP PKRA+S ++FFSQ RE IK NP F +VG++LG +WK++ EE++PY
Sbjct: 88 KSKKDPLKPKRALSAYMFFSQDWRERIKAENPDAGFGEVGKLLGAKWKELDEEEKKPYIE 147
Query: 493 KARADKKRYKDEISGY 508
A DK+R ++E S Y
Sbjct: 148 LANKDKERAENEKSAY 163
>gi|71012570|ref|XP_758511.1| hypothetical protein UM02364.1 [Ustilago maydis 521]
gi|46098169|gb|EAK83402.1| hypothetical protein UM02364.1 [Ustilago maydis 521]
Length = 125
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 50/70 (71%)
Query: 428 KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEER 487
+K+ K KKDP+APKR +S ++FFSQ +RE +K +NP F +VGR+LG +WK+MS E+
Sbjct: 41 QKRTTKAKKDPDAPKRPLSAYMFFSQDQRERVKNANPEAGFGEVGRLLGAKWKEMSEAEK 100
Query: 488 EPYESKARAD 497
+PY A D
Sbjct: 101 KPYNDMANRD 110
>gi|409043132|gb|EKM52615.1| hypothetical protein PHACADRAFT_164552 [Phanerochaete carnosa
HHB-10118-sp]
Length = 115
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 61/95 (64%)
Query: 418 KKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGE 477
K +R D +K +K KKD NAPKRA+S ++FFSQ RE +K NP +F ++G++LG
Sbjct: 7 KATRRKAADKEKAPRKTKKDKNAPKRALSAYMFFSQDWRERVKAENPDASFGELGKLLGT 66
Query: 478 RWKKMSVEEREPYESKARADKKRYKDEISGYKNPK 512
+WK++ EE++PY +A DK R + E Y N K
Sbjct: 67 KWKELDEEEKKPYIEQAERDKARAEREKKDYDNKK 101
>gi|312378819|gb|EFR25283.1| hypothetical protein AND_09522 [Anopheles darlingi]
Length = 527
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 52/83 (62%)
Query: 427 GKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEE 486
G+ KK+K+ KDPNAPKR++S F +F ER +K NP D+ + LG +W M E
Sbjct: 348 GRGKKRKQFKDPNAPKRSLSAFFWFCHDERNKVKALNPEYGVGDIAKELGRKWSDMDAEI 407
Query: 487 REPYESKARADKKRYKDEISGYK 509
++ YE A DK+RY+ E++ YK
Sbjct: 408 KQKYEQMAEKDKQRYEQEMTEYK 430
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 439 NAPKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
N P+ M+ + FF Q RE KK +P + F + R ERWK M +E++ + A
Sbjct: 268 NKPRGRMTAYAFFVQTCREEHKKKHPEEQVIFAEFSRKCAERWKTMLDKEKQRFHEMAEK 327
Query: 497 DKKRYKDEISGYKNPKPMDIDSG 519
DK+RY+ E+ Y PK + G
Sbjct: 328 DKQRYELEMQSYVPPKGAVVGRG 350
>gi|351713930|gb|EHB16849.1| FACT complex subunit SSRP1 [Heterocephalus glaber]
Length = 278
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 100/244 (40%), Gaps = 46/244 (18%)
Query: 70 PAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQY 129
P + F ++S AD+ + + F L L L L+G D
Sbjct: 75 PVEAFTQNVLSKADIIQAAGDTICVF---------------LELQCLTLKGPVPDV---- 115
Query: 130 SSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNT 189
++++LD PI++GQT Y ++L F D + L M++E +
Sbjct: 116 ------------------LLISLDLPIKQGQTRYHFLILLFSKDEDISLPLNMNDEEVEK 157
Query: 190 KYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLY--- 246
++ L + ++E+ + + + L KI PG + V S +A +L
Sbjct: 158 HFERWLTKNMSSSLYEMVSRVTKALVNHKIMVPGNSQRHSGAQCVTCSYEASSRLLTPME 217
Query: 247 ---PLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ 303
P+E F ++ KPP + EI +V F A G + H FD I K ++ F +I+
Sbjct: 218 WLNPMEWGFIYVHKPPVHLCFIEITFVNF---ACGTTTTHSFDFEINTKQGTQYTFGSIE 274
Query: 304 RNEY 307
R EY
Sbjct: 275 REEY 278
>gi|110287688|sp|Q4PBZ9.2|NHP6_USTMA RecName: Full=Non-histone chromosomal protein 6
Length = 99
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 50/70 (71%)
Query: 428 KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEER 487
+K+ K KKDP+APKR +S ++FFSQ +RE +K +NP F +VGR+LG +WK+MS E+
Sbjct: 15 QKRTTKAKKDPDAPKRPLSAYMFFSQDQRERVKNANPEAGFGEVGRLLGAKWKEMSEAEK 74
Query: 488 EPYESKARAD 497
+PY A D
Sbjct: 75 KPYNDMANRD 84
>gi|170097113|ref|XP_001879776.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164645179|gb|EDR09427.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 114
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 53/77 (68%)
Query: 432 QKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYE 491
+K KKDPN PKRA+S ++FFSQ R+ IK NP F +VG++LG +WK++ EE++PY
Sbjct: 22 RKGKKDPNKPKRALSAYMFFSQDWRDRIKAENPDAGFGEVGKLLGAKWKELDEEEKKPYV 81
Query: 492 SKARADKKRYKDEISGY 508
+A DK R ++ + Y
Sbjct: 82 EQASKDKTRAEEAKAAY 98
>gi|343427561|emb|CBQ71088.1| probable NHP6B-nonhistone chromosomal protein [Sporisorium
reilianum SRZ2]
Length = 99
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 48/70 (68%)
Query: 428 KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEER 487
+K+ K KKDP APKR +S ++FFSQ RE +K +NP F+DVGR+LG +W +MS E+
Sbjct: 15 QKRTTKSKKDPAAPKRPLSAYMFFSQDHRERVKTANPEAGFSDVGRLLGAKWNEMSDAEK 74
Query: 488 EPYESKARAD 497
+PY A D
Sbjct: 75 KPYNDMANRD 84
>gi|332017611|gb|EGI58308.1| Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat
subunit A [Acromyrmex echinatior]
Length = 1249
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 15/138 (10%)
Query: 387 SDASESGGEKEKPA--------------KKESKKESSSVKASTSKKKSRDGDEDGKKKKQ 432
+D ES G E+PA E K S + + G+ + KK+
Sbjct: 8 NDVPESNGTMEQPAYNGEIEEHAVKSPVSTEEKAPDSVCDNGVKRSATATGNTPNRTKKR 67
Query: 433 KKK-KDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYE 491
KK +D AP++ +SG+ F RE ++ NP + FT++ ++L W K+ +++++ Y
Sbjct: 68 KKAPRDATAPRQPLSGYFLFLNDRREKVRNQNPSLTFTEITKLLAAEWSKLPIDQKQRYL 127
Query: 492 SKARADKKRYKDEISGYK 509
A DK+RY E S YK
Sbjct: 128 DAAEQDKERYNREFSDYK 145
>gi|167536391|ref|XP_001749867.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771582|gb|EDQ85246.1| predicted protein [Monosiga brevicollis MX1]
Length = 197
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 428 KKKKQKK-KKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEE 486
K+ +QK+ KKDPN PK A S ++FFSQ R K NP TDV +++G W++MS
Sbjct: 24 KRPRQKRAKKDPNKPKNAQSAYMFFSQKVRPQFSKDNPDKKMTDVSKLIGAAWREMSDAA 83
Query: 487 REPYESKARADKKRYKDEISGYKNP 511
++PYE AR DK+RY+ +++ Y P
Sbjct: 84 KKPYEEMARRDKQRYQHQMATYVPP 108
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 47/80 (58%)
Query: 430 KKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREP 489
K+ K++KDP+APK+ ++ + ++ R ++ N D+ +++G WK +S ++P
Sbjct: 115 KRGKRRKDPDAPKKPLTAYFLYAADRRAALRAQNRNATVADIAKIIGAEWKDLSDAVKKP 174
Query: 490 YESKARADKKRYKDEISGYK 509
Y+ +A K +Y+ E+ YK
Sbjct: 175 YQDRADRLKSQYQKEVELYK 194
>gi|260828085|ref|XP_002608994.1| hypothetical protein BRAFLDRAFT_124005 [Branchiostoma floridae]
gi|229294348|gb|EEN65004.1| hypothetical protein BRAFLDRAFT_124005 [Branchiostoma floridae]
Length = 410
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 74/137 (54%), Gaps = 17/137 (12%)
Query: 376 GSPTDDSGEEDSDASESGGEKEK---PAKKESKKESSSVKASTSKKKSRDGDEDGKKKKQ 432
G ++DSG + A G++++ P +E KK R G KK++
Sbjct: 90 GGSSEDSGVSSASAQLLDGQQDQINQPTNEEPKK--------------RKGGWPKGKKRK 135
Query: 433 KKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYES 492
K+ +D NAPK ++G++ + +RE +K +P + FT++ R+LG RW +S E+++ Y
Sbjct: 136 KETRDSNAPKAPVTGYVLYLTEQREKLKVEHPELPFTEMTRLLGSRWSALSQEDKQKYLD 195
Query: 493 KARADKKRYKDEISGYK 509
A DK+RY +E+ Y+
Sbjct: 196 AAEVDKRRYIEELKAYQ 212
>gi|392333067|ref|XP_003752781.1| PREDICTED: high mobility group protein B3-like [Rattus norvegicus]
gi|392353165|ref|XP_001067503.2| PREDICTED: high mobility group protein B3-like [Rattus norvegicus]
Length = 212
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%)
Query: 433 KKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYES 492
KKKKDPNAPKR SGF F R IK +NPGI+ DV + LGE W +S E++PY +
Sbjct: 99 KKKKDPNAPKRPPSGFFLFCSEFRPKIKSANPGISIEDVVKKLGEMWNNLSDSEKQPYMT 158
Query: 493 KARADKKRYKDEISGYKN 510
KA K++Y+ +++ YK+
Sbjct: 159 KAAKLKEKYEKDVADYKS 176
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE K NP + F + + ERWK MS +E+ ++ A+ADK RY
Sbjct: 27 MSAYAFFVQTCREEHKTKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAKADKVRYG 86
Query: 503 DEISGYKNPK 512
E+ Y++ K
Sbjct: 87 REMKDYESAK 96
>gi|302851253|ref|XP_002957151.1| hypothetical protein VOLCADRAFT_77427 [Volvox carteri f.
nagariensis]
gi|300257558|gb|EFJ41805.1| hypothetical protein VOLCADRAFT_77427 [Volvox carteri f.
nagariensis]
Length = 94
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 55/78 (70%)
Query: 431 KQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPY 490
++KK KDPNAPK+ + +++F + RE +K NPG++ TD+G+ LGE WK++S E+++ Y
Sbjct: 14 REKKVKDPNAPKKPLGAYMWFCKDMRERVKAENPGMSVTDIGKRLGELWKEVSEEDKKKY 73
Query: 491 ESKARADKKRYKDEISGY 508
+A DK+RY E + Y
Sbjct: 74 LKQAEDDKERYNKEAAAY 91
>gi|300122042|emb|CBK22616.2| unnamed protein product [Blastocystis hominis]
Length = 224
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 58/84 (69%)
Query: 430 KKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREP 489
K+ KK+ DP+ PK+ +SG++ + +RE +KK NP + T++ +VLGE+WK++S EE++P
Sbjct: 15 KRGKKEVDPDKPKKPLSGYMRYCNEQREQVKKENPELKLTEISKVLGEKWKELSEEEKKP 74
Query: 490 YESKARADKKRYKDEISGYKNPKP 513
Y+ ADK++Y ++ YK P
Sbjct: 75 YQDAYEADKEKYDLQMEEYKKTHP 98
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 52/81 (64%)
Query: 433 KKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYES 492
KK DPN PKR +S +I FS +RE +K+ NP ++ ++ +LG+ WK++ EE++ YE
Sbjct: 101 KKNADPNKPKRPLSSYIIFSNDKREEVKRKNPDMSNKEITTLLGKMWKELPEEEKQEYEK 160
Query: 493 KARADKKRYKDEISGYKNPKP 513
+ +KK Y++++ Y+ P
Sbjct: 161 QHAEEKKAYEEKMGEYRREHP 181
>gi|260166759|gb|ACX32991.1| RE09522p [Drosophila melanogaster]
Length = 411
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 52/83 (62%)
Query: 427 GKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEE 486
G+ KK+K+ KDPNAPKR++S F +F ER +K NP D+ + LG +W + E
Sbjct: 275 GRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEV 334
Query: 487 REPYESKARADKKRYKDEISGYK 509
++ YES A DK RY+ E++ YK
Sbjct: 335 KQKYESMAERDKARYEREMTEYK 357
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 441 PKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESKARADK 498
P+ M+ + +F Q RE KK +P + F + R ERWK M +E++ + A DK
Sbjct: 197 PRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEKDK 256
Query: 499 KRYKDEISGYKNPKPMDIDSG 519
+RY+ E+ Y PK + G
Sbjct: 257 QRYEAEMQNYVPPKGAVVGRG 277
>gi|170056683|ref|XP_001864141.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167876428|gb|EDS39811.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 372
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 49/83 (59%)
Query: 427 GKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEE 486
GK KK+K KDPNAPKR++S F +F ER +K NP D+ + LG +W M E
Sbjct: 218 GKGKKRKAFKDPNAPKRSLSAFFWFCHEERNKVKALNPEYGVGDIAKELGRKWSDMDAEV 277
Query: 487 REPYESKARADKKRYKDEISGYK 509
+ YE A DK RY+ E++ YK
Sbjct: 278 KSRYEQMAEKDKARYEAEMTEYK 300
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 439 NAPKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
N P+ M+ + FF Q RE KK +P + F + R ERWK M +E++ + A
Sbjct: 138 NKPRGRMTAYAFFVQTCREEHKKKHPEEQVIFAEFSRKCAERWKTMLDKEKQRFHEMAEK 197
Query: 497 DKKRYKDEISGYKNPKPMDIDSG 519
DK RY+ E+ Y PK + G
Sbjct: 198 DKARYELEMQSYVPPKGTVVGKG 220
>gi|62362190|gb|AAX81532.1| amphiHMG1/2-like protein [Adineta ricciae]
Length = 142
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 54/79 (68%)
Query: 432 QKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYE 491
+K KDPNAPKR +S F FSQ ER +IKK +P ++ D+ + +G RWKK+S + R+ YE
Sbjct: 9 KKASKDPNAPKRPLSAFFLFSQDERPDIKKKSPSLSVGDISKEIGSRWKKVSDDVRKRYE 68
Query: 492 SKARADKKRYKDEISGYKN 510
KA +KK+Y+ ++ YK
Sbjct: 69 QKAADEKKKYEVRVAEYKK 87
>gi|221329973|ref|NP_001138203.1| dorsal switch protein 1, isoform F [Drosophila melanogaster]
gi|220901792|gb|ACL82935.1| dorsal switch protein 1, isoform F [Drosophila melanogaster]
Length = 397
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 52/83 (62%)
Query: 427 GKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEE 486
G+ KK+K+ KDPNAPKR++S F +F ER +K NP D+ + LG +W + E
Sbjct: 261 GRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEV 320
Query: 487 REPYESKARADKKRYKDEISGYK 509
++ YES A DK RY+ E++ YK
Sbjct: 321 KQKYESMAERDKARYEREMTEYK 343
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 441 PKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESKARADK 498
P+ M+ + +F Q RE KK +P + F + R ERWK M +E++ + A DK
Sbjct: 183 PRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEKDK 242
Query: 499 KRYKDEISGYKNPKPMDIDSG 519
+RY+ E+ Y PK + G
Sbjct: 243 QRYEAEMQNYVPPKGAVVGRG 263
>gi|158297853|ref|XP_318023.4| AGAP004791-PA [Anopheles gambiae str. PEST]
gi|158297857|ref|XP_001689081.1| AGAP004789-PA [Anopheles gambiae str. PEST]
gi|157014526|gb|EAA13138.4| AGAP004791-PA [Anopheles gambiae str. PEST]
gi|157014528|gb|EDO63498.1| AGAP004789-PA [Anopheles gambiae str. PEST]
Length = 324
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%)
Query: 428 KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEER 487
KKK+QK KD NAPK ++G++ + RE +++ +P + +V +++ E W K+S E +
Sbjct: 61 KKKRQKAPKDANAPKHPLTGYVRYMNEHREGVRQKHPNLTPIEVTKIMAEEWSKLSEERK 120
Query: 488 EPYESKARADKKRYKDEISGYK 509
+PY A DK+RY EIS YK
Sbjct: 121 KPYLEAAEVDKERYNKEISEYK 142
>gi|195448286|ref|XP_002071591.1| GK25058 [Drosophila willistoni]
gi|194167676|gb|EDW82577.1| GK25058 [Drosophila willistoni]
Length = 406
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 52/83 (62%)
Query: 427 GKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEE 486
G+ KK+K+ KDPNAPKR++S F +F ER +K NP D+ + LG +W + E
Sbjct: 265 GRGKKRKQMKDPNAPKRSLSAFFWFCNDERNKVKALNPEYGVGDIAKELGRKWSDVDPEV 324
Query: 487 REPYESKARADKKRYKDEISGYK 509
++ YES A DK RY+ E++ YK
Sbjct: 325 KQKYESMAERDKARYEREMTEYK 347
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 441 PKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESKARADK 498
P+ M+ + +F Q RE KK +P + F + R ERWK M +E++ + A DK
Sbjct: 187 PRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEKDK 246
Query: 499 KRYKDEISGYKNPKPMDIDSG 519
+RY+ E+ Y PK + G
Sbjct: 247 QRYETEMQNYVPPKGAVVGRG 267
>gi|392575401|gb|EIW68534.1| hypothetical protein TREMEDRAFT_32029 [Tremella mesenterica DSM
1558]
Length = 116
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 53/80 (66%)
Query: 429 KKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEERE 488
K+ K+KKDPNAPKR +S ++FF Q R IK +P ++F + G++LGE+WK MS E++
Sbjct: 19 KRAPKEKKDPNAPKRGLSAYMFFVQDYRPKIKNDHPDVSFGETGKLLGEKWKAMSAAEKK 78
Query: 489 PYESKARADKKRYKDEISGY 508
P+E A DK R + + Y
Sbjct: 79 PFEDLAAKDKLRAEKDKKAY 98
>gi|195040353|ref|XP_001991052.1| GH12282 [Drosophila grimshawi]
gi|193900810|gb|EDV99676.1| GH12282 [Drosophila grimshawi]
Length = 402
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 52/83 (62%)
Query: 427 GKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEE 486
G+ KK+K+ KDPNAPKR++S F +F ER +K NP D+ + LG +W + E
Sbjct: 263 GRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEV 322
Query: 487 REPYESKARADKKRYKDEISGYK 509
++ YES A DK RY+ E++ YK
Sbjct: 323 KQKYESMAERDKARYEREMTEYK 345
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 441 PKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESKARADK 498
P+ M+ + +F Q RE KK +P + F + R ERWK M +E++ + A DK
Sbjct: 185 PRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEKDK 244
Query: 499 KRYKDEISGYKNPKPMDIDSG 519
+RY+ E+ Y PK + G
Sbjct: 245 QRYEQEMQNYVPPKGTVVGRG 265
>gi|45555716|ref|NP_996485.1| dorsal switch protein 1, isoform E [Drosophila melanogaster]
gi|17366497|sp|Q24537.1|HMG2_DROME RecName: Full=High mobility group protein DSP1; AltName:
Full=Protein dorsal switch 1
gi|1150375|emb|CAA61938.1| ssrp2 [Drosophila melanogaster]
gi|45447019|gb|AAS65386.1| dorsal switch protein 1, isoform E [Drosophila melanogaster]
Length = 393
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 52/83 (62%)
Query: 427 GKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEE 486
G+ KK+K+ KDPNAPKR++S F +F ER +K NP D+ + LG +W + E
Sbjct: 257 GRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEV 316
Query: 487 REPYESKARADKKRYKDEISGYK 509
++ YES A DK RY+ E++ YK
Sbjct: 317 KQKYESMAERDKARYEREMTEYK 339
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 441 PKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESKARADK 498
P+ M+ + +F Q RE KK +P + F + R ERWK M +E++ + A DK
Sbjct: 179 PRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEKDK 238
Query: 499 KRYKDEISGYKNPKPMDIDSG 519
+RY+ E+ Y PK + G
Sbjct: 239 QRYEAEMQNYVPPKGAVVGRG 259
>gi|194770156|ref|XP_001967163.1| GF19115 [Drosophila ananassae]
gi|190619283|gb|EDV34807.1| GF19115 [Drosophila ananassae]
Length = 387
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 52/83 (62%)
Query: 427 GKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEE 486
G+ KK+K+ KDPNAPKR++S F +F ER +K NP D+ + LG +W + E
Sbjct: 251 GRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEV 310
Query: 487 REPYESKARADKKRYKDEISGYK 509
++ YES A DK RY+ E++ YK
Sbjct: 311 KQKYESMAERDKARYEREMTEYK 333
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 441 PKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESKARADK 498
P+ M+ + +F Q RE KK +P + F + R ERWK M +E++ + A DK
Sbjct: 173 PRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEKDK 232
Query: 499 KRYKDEISGYKNPKPMDIDSG 519
+RY+ E+ Y PK + G
Sbjct: 233 QRYEAEMQNYVPPKGAVVGRG 253
>gi|238576322|ref|XP_002387994.1| hypothetical protein MPER_13045 [Moniliophthora perniciosa FA553]
gi|215448913|gb|EEB88924.1| hypothetical protein MPER_13045 [Moniliophthora perniciosa FA553]
Length = 215
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 58/91 (63%), Gaps = 11/91 (12%)
Query: 432 QKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYE 491
+K KKDPNAPKRA+S ++FFSQ R+ IK NP +F G++LG +WK++ EE++PY
Sbjct: 117 RKPKKDPNAPKRALSAYMFFSQDWRDRIKTENPDASF---GKLLGAKWKELDEEEKKPYV 173
Query: 492 SKARADKKRYKDEISGYKNPKPMDIDSGNES 522
+A DK+R + E Y DSG +S
Sbjct: 174 EQAAKDKERAEGEKIAY--------DSGKKS 196
>gi|45551469|ref|NP_727959.2| dorsal switch protein 1, isoform D [Drosophila melanogaster]
gi|45447020|gb|AAN09394.2| dorsal switch protein 1, isoform D [Drosophila melanogaster]
gi|327180774|gb|AEA30996.1| RE44118p [Drosophila melanogaster]
Length = 386
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 52/83 (62%)
Query: 427 GKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEE 486
G+ KK+K+ KDPNAPKR++S F +F ER +K NP D+ + LG +W + E
Sbjct: 250 GRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEV 309
Query: 487 REPYESKARADKKRYKDEISGYK 509
++ YES A DK RY+ E++ YK
Sbjct: 310 KQKYESMAERDKARYEREMTEYK 332
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 441 PKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESKARADK 498
P+ M+ + +F Q RE KK +P + F + R ERWK M +E++ + A DK
Sbjct: 172 PRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEKDK 231
Query: 499 KRYKDEISGYKNPKPMDIDSG 519
+RY+ E+ Y PK + G
Sbjct: 232 QRYEAEMQNYVPPKGAVVGRG 252
>gi|24642472|ref|NP_727960.1| dorsal switch protein 1, isoform A [Drosophila melanogaster]
gi|24642474|ref|NP_727961.1| dorsal switch protein 1, isoform B [Drosophila melanogaster]
gi|24642476|ref|NP_542446.2| dorsal switch protein 1, isoform C [Drosophila melanogaster]
gi|16768340|gb|AAL28389.1| GM02110p [Drosophila melanogaster]
gi|22832356|gb|AAN09395.1| dorsal switch protein 1, isoform A [Drosophila melanogaster]
gi|22832357|gb|AAN09396.1| dorsal switch protein 1, isoform B [Drosophila melanogaster]
gi|22832358|gb|AAF48594.2| dorsal switch protein 1, isoform C [Drosophila melanogaster]
gi|220943192|gb|ACL84139.1| Dsp1-PA [synthetic construct]
gi|220953466|gb|ACL89276.1| Dsp1-PA [synthetic construct]
Length = 385
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 52/83 (62%)
Query: 427 GKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEE 486
G+ KK+K+ KDPNAPKR++S F +F ER +K NP D+ + LG +W + E
Sbjct: 249 GRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEV 308
Query: 487 REPYESKARADKKRYKDEISGYK 509
++ YES A DK RY+ E++ YK
Sbjct: 309 KQKYESMAERDKARYEREMTEYK 331
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 441 PKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESKARADK 498
P+ M+ + +F Q RE KK +P + F + R ERWK M +E++ + A DK
Sbjct: 171 PRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEKDK 230
Query: 499 KRYKDEISGYKNPKPMDIDSG 519
+RY+ E+ Y PK + G
Sbjct: 231 QRYEAEMQNYVPPKGAVVGRG 251
>gi|406866133|gb|EKD19173.1| HMG box protein [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 525
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 61/93 (65%), Gaps = 4/93 (4%)
Query: 419 KSRDGDEDGKKKKQKK--KKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLG 476
K +G G K+K ++ K D NAP+R S ++ FS RE++K N ++FT++ +++G
Sbjct: 95 KEANGCAPGVKRKYRRHPKPDDNAPERPPSAYVIFSNKMREDLKGRN--LSFTEIAKLVG 152
Query: 477 ERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
E W+ +S E++PYE +A A K+RY +E++ YK
Sbjct: 153 ENWQNLSPSEKDPYEQQASAAKERYNNELAEYK 185
>gi|194893856|ref|XP_001977954.1| GG17955 [Drosophila erecta]
gi|195567092|ref|XP_002107106.1| GD17278 [Drosophila simulans]
gi|190649603|gb|EDV46881.1| GG17955 [Drosophila erecta]
gi|194204505|gb|EDX18081.1| GD17278 [Drosophila simulans]
Length = 393
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 52/83 (62%)
Query: 427 GKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEE 486
G+ KK+K+ KDPNAPKR++S F +F ER +K NP D+ + LG +W + E
Sbjct: 257 GRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEV 316
Query: 487 REPYESKARADKKRYKDEISGYK 509
++ YES A DK RY+ E++ YK
Sbjct: 317 KQKYESMAERDKARYEREMTEYK 339
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 441 PKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESKARADK 498
P+ M+ + +F Q RE KK +P + F + R ERWK M +E++ + A DK
Sbjct: 179 PRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEKDK 238
Query: 499 KRYKDEISGYKNPKPMDIDSG 519
+RY+ E+ Y PK + G
Sbjct: 239 QRYEAEMQNYVPPKGAVVGRG 259
>gi|358377984|gb|EHK15667.1| hypothetical protein TRIVIDRAFT_228694 [Trichoderma virens Gv29-8]
Length = 521
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 55/82 (67%), Gaps = 1/82 (1%)
Query: 428 KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEER 487
+K ++ K D NAP+R MS ++ FS RE +K + ++FT++ +++GE W+ + + ER
Sbjct: 107 RKYRRHPKPDENAPERPMSAYVLFSNKLRETLK-GDRSLSFTEIAKLVGEHWQSLPLSER 165
Query: 488 EPYESKARADKKRYKDEISGYK 509
E YE++ARA K RY EI+ YK
Sbjct: 166 EVYEAQARASKDRYYREITIYK 187
>gi|270005614|gb|EFA02062.1| hypothetical protein TcasGA2_TC007692 [Tribolium castaneum]
Length = 557
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 51/85 (60%)
Query: 425 EDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSV 484
E + KK+K+ KDPNAPKR++S F +FS ER +K NP D+ + LG RW
Sbjct: 434 EKQRGKKRKQVKDPNAPKRSLSAFFWFSNDERAKVKSQNPEFGVGDIAKELGRRWADAEP 493
Query: 485 EEREPYESKARADKKRYKDEISGYK 509
E + YE+ A DK RY+ E++ YK
Sbjct: 494 EMKSKYEALADKDKARYEKEMTAYK 518
>gi|195479189|ref|XP_002100798.1| GE17263 [Drosophila yakuba]
gi|194188322|gb|EDX01906.1| GE17263 [Drosophila yakuba]
Length = 394
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 52/83 (62%)
Query: 427 GKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEE 486
G+ KK+K+ KDPNAPKR++S F +F ER +K NP D+ + LG +W + E
Sbjct: 258 GRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEV 317
Query: 487 REPYESKARADKKRYKDEISGYK 509
++ YES A DK RY+ E++ YK
Sbjct: 318 KQKYESMAERDKARYEREMTEYK 340
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 441 PKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESKARADK 498
P+ M+ + +F Q RE KK +P + F + R ERWK M +E++ + A DK
Sbjct: 180 PRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEKDK 239
Query: 499 KRYKDEISGYKNPKPMDIDSG 519
+RY+ E+ Y PK + G
Sbjct: 240 QRYEAEMQNYVPPKGAVVGRG 260
>gi|397640872|gb|EJK74364.1| hypothetical protein THAOC_03961 [Thalassiosira oceanica]
Length = 1104
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%)
Query: 431 KQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPY 490
K+K KKDPNAPKR S F +S R ++K++NP F D+ +++ +K + VEER +
Sbjct: 1021 KRKAKKDPNAPKRNQSAFFLYSNATRNDVKEANPEAKFGDIAKIISTHFKALPVEERAYW 1080
Query: 491 ESKARADKKRYKDEISGYK 509
++KA DK RY+ ++ YK
Sbjct: 1081 DNKAAEDKARYQQQLQMYK 1099
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 443 RAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
R S F +S R +K NP F D+ +++ +K +S ER ++ A DK+RY+
Sbjct: 944 RNQSAFFLYSNANRNRVKAENPDAKFGDIAKLISVEFKALSEHERAKWDKLAAEDKERYQ 1003
Query: 503 DEISGYKNPKPMDIDS 518
E+ Y+ P ++ D+
Sbjct: 1004 REMEDYEPPSDLEDDA 1019
>gi|195393910|ref|XP_002055595.1| GJ19445 [Drosophila virilis]
gi|194150105|gb|EDW65796.1| GJ19445 [Drosophila virilis]
Length = 403
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 52/83 (62%)
Query: 427 GKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEE 486
G+ KK+K+ KDPNAPKR++S F +F ER +K NP D+ + LG +W + E
Sbjct: 264 GRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEYGVGDIAKELGRKWSDVDPEV 323
Query: 487 REPYESKARADKKRYKDEISGYK 509
++ YES A DK RY+ E++ YK
Sbjct: 324 KQKYESMAERDKARYEREMTEYK 346
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 441 PKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESKARADK 498
P+ M+ + +F Q RE KK +P + F + R ERWK M +E++ + A DK
Sbjct: 186 PRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEKDK 245
Query: 499 KRYKDEISGYKNPKPMDIDSG 519
+RY+ E+ Y PK + G
Sbjct: 246 QRYETEMQNYVPPKGAVVGRG 266
>gi|300122950|emb|CBK23957.2| unnamed protein product [Blastocystis hominis]
Length = 163
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
Query: 429 KKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEERE 488
+K+ + K P APKRAMS F+FFS +R I+ NP + T+V LGE W+ M+ EE+E
Sbjct: 14 QKRGHQNKVPGAPKRAMSPFLFFSNEKRGQIQTENPSMKITEVSVKLGEIWRDMTEEEKE 73
Query: 489 PYESKARADKKRY---KDEISG 507
PY K+R D+ RY +DE G
Sbjct: 74 PYMQKSREDRDRYHAQQDEFKG 95
>gi|307105669|gb|EFN53917.1| hypothetical protein CHLNCDRAFT_136125 [Chlorella variabilis]
Length = 101
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 51/72 (70%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR +S +++F+ +R +KKS+P ++ +VG+ G WK++S +E+EPY+ KA
Sbjct: 27 DPNAPKRPLSAYMYFASDKRVEMKKSDPSLSLGEVGKATGAAWKELSDKEKEPYQKKADK 86
Query: 497 DKKRYKDEISGY 508
DK RY+ E + Y
Sbjct: 87 DKARYEKEKAAY 98
>gi|198469582|ref|XP_001355062.2| GA11488 [Drosophila pseudoobscura pseudoobscura]
gi|198146939|gb|EAL32118.2| GA11488 [Drosophila pseudoobscura pseudoobscura]
Length = 393
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 52/83 (62%)
Query: 427 GKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEE 486
G+ KK+K+ KDPNAPKR++S F +F ER +K NP D+ + LG +W + E
Sbjct: 256 GRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEYGVGDIAKELGRKWSDVDPEV 315
Query: 487 REPYESKARADKKRYKDEISGYK 509
++ YES A DK RY+ E++ YK
Sbjct: 316 KQKYESMAERDKARYEREMTEYK 338
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 441 PKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESKARADK 498
P+ M+ + +F Q RE KK +P + F + R ERWK M +E++ + A DK
Sbjct: 178 PRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEKDK 237
Query: 499 KRYKDEISGYKNPKPMDIDSG 519
+RY+ E+ Y PK + G
Sbjct: 238 QRYEAEMQNYVPPKGTVVGRG 258
>gi|224008000|ref|XP_002292959.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971085|gb|EED89420.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 105
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 51/80 (63%)
Query: 429 KKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEERE 488
KK KK+KDP PKRA F+FF+ R + + PGI F ++G +LGERW+ + EE++
Sbjct: 24 KKYLKKQKDPEQPKRARGSFVFFTFEHRPKVMEEFPGIKFVEMGSILGERWRSLPAEEKQ 83
Query: 489 PYESKARADKKRYKDEISGY 508
YE +A+ DK R+ E+ Y
Sbjct: 84 KYEDQAQEDKLRFNAEMEKY 103
>gi|195134440|ref|XP_002011645.1| GI10980 [Drosophila mojavensis]
gi|193906768|gb|EDW05635.1| GI10980 [Drosophila mojavensis]
Length = 402
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 52/83 (62%)
Query: 427 GKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEE 486
G+ KK+K+ KDPNAPKR++S F +F ER +K NP D+ + LG +W + E
Sbjct: 261 GRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEYGVGDIAKELGRKWSDVDPEV 320
Query: 487 REPYESKARADKKRYKDEISGYK 509
++ YES A DK RY+ E++ YK
Sbjct: 321 KQKYESMAERDKARYEREMTEYK 343
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 441 PKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESKARADK 498
P+ M+ + +F Q RE KK +P + F + R ERWK M +E++ + A DK
Sbjct: 183 PRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEKDK 242
Query: 499 KRYKDEISGYKNPKPMDIDSG 519
+RY+ E+ Y PK + G
Sbjct: 243 QRYEQEMQNYVPPKGAVVGRG 263
>gi|345320167|ref|XP_001521836.2| PREDICTED: FACT complex subunit SSRP1-like, partial
[Ornithorhynchus anatinus]
Length = 295
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 48/81 (59%)
Query: 69 PPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQ 128
P + F ++S ADV +A+ F + LTPRGRY + ++ FL L G+ D+KI
Sbjct: 37 PETKAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPPFLHLHGKTFDYKIP 96
Query: 129 YSSVVRLFLLPKSNQPHTFVV 149
Y++V+RLFLLP +Q F V
Sbjct: 97 YTTVLRLFLLPHKDQRQMFFV 117
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 48/76 (63%)
Query: 433 KKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYES 492
KK KDPNAPKR MS ++ + RE IK +PGI+ TD+ + GE WK M+ E++E ++
Sbjct: 119 KKGKDPNAPKRPMSAYMLWLNASREKIKADHPGISITDLSKKAGEIWKGMTKEKKEEWDR 178
Query: 493 KARADKKRYKDEISGY 508
KA K+ Y+ + Y
Sbjct: 179 KAEEAKREYEKAMKEY 194
>gi|348669511|gb|EGZ09334.1| hypothetical protein PHYSODRAFT_288743 [Phytophthora sojae]
Length = 231
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 427 GKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNP-GIAFTDVGRVLGERWKKMSVE 485
GKK+K+ +KK P APKR S +I FS +RE IK + P TDV R + + W KM E
Sbjct: 25 GKKRKRLQKKAPGAPKRGKSPYILFSMEKREEIKATMPENSKVTDVMRAIADAWGKMGDE 84
Query: 486 EREPYESKARADKKRYKDEISGYKNP 511
E++P++ A ADK+RY++E++ Y P
Sbjct: 85 EKQPWKVAAEADKQRYEEEMAAYDGP 110
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%)
Query: 432 QKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYE 491
++ KK P+APKRA S F+F+SQ+ R IK + + T++ + LGE W K + E++ P+
Sbjct: 116 KRAKKHPDAPKRASSAFLFYSQVMRPRIKAEHQDMKNTEISKQLGEAWAKATDEQKAPFV 175
Query: 492 SKARADKKRYKDEISGY 508
K + D+ RYK E+ +
Sbjct: 176 EKEKVDRARYKREMEEW 192
>gi|587104|emb|CAA57212.1| unnamed protein product [Drosophila melanogaster]
Length = 328
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 52/83 (62%)
Query: 427 GKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEE 486
G+ KK+K+ KDPNAPKR++S F +F ER +K NP D+ + LG +W + E
Sbjct: 192 GRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEV 251
Query: 487 REPYESKARADKKRYKDEISGYK 509
++ YES A DK RY+ E++ YK
Sbjct: 252 KQKYESMAERDKARYEREMTEYK 274
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 441 PKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESKARADK 498
P+ M+ + +F Q RE KK +P + F + R ERWK M +E++ + A DK
Sbjct: 114 PRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEKDK 173
Query: 499 KRYKDEISGYKNPKPMDIDSG 519
+RY+ E+ Y PK + G
Sbjct: 174 QRYEAEMQNYVPPKGAVVGRG 194
>gi|189236107|ref|XP_973934.2| PREDICTED: similar to High mobility group protein DSP1 (Protein
dorsal switch 1) [Tribolium castaneum]
Length = 505
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 51/85 (60%)
Query: 425 EDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSV 484
E + KK+K+ KDPNAPKR++S F +FS ER +K NP D+ + LG RW
Sbjct: 382 EKQRGKKRKQVKDPNAPKRSLSAFFWFSNDERAKVKSQNPEFGVGDIAKELGRRWADAEP 441
Query: 485 EEREPYESKARADKKRYKDEISGYK 509
E + YE+ A DK RY+ E++ YK
Sbjct: 442 EMKSKYEALADKDKARYEKEMTAYK 466
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 441 PKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESKARADK 498
P+ M+ + FF Q RE KK +P + F + + ERWK M +E++ + A DK
Sbjct: 307 PRGRMTAYAFFVQTCREEHKKKHPEENVVFAEFSKKCAERWKTMLDKEKKRFHEMAENDK 366
Query: 499 KRYKDEISGYKNPK 512
KRY DE+ Y PK
Sbjct: 367 KRYDDEMKNYTPPK 380
>gi|255074117|ref|XP_002500733.1| hypothetical protein MICPUN_57400 [Micromonas sp. RCC299]
gi|226515996|gb|ACO61991.1| hypothetical protein MICPUN_57400 [Micromonas sp. RCC299]
Length = 646
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 49/73 (67%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPK+ +S +I F++ R + NPG++ T+V + LG RWK + EE+ +E+KA+
Sbjct: 567 DPNAPKKPLSAYIIFTKERRSAVVAENPGLSLTEVTKELGARWKAIGAEEKSVFEAKAKK 626
Query: 497 DKKRYKDEISGYK 509
DK+RY E+ Y+
Sbjct: 627 DKERYAVEMEAYE 639
>gi|148235321|ref|NP_001089163.1| high mobility group box 3 [Xenopus laevis]
gi|55824420|gb|AAV66347.1| high mobility group B3b protein [Xenopus laevis]
gi|114108280|gb|AAI23148.1| LOC734200 protein [Xenopus laevis]
Length = 201
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 53/81 (65%)
Query: 430 KKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREP 489
KK K+ KDPNAPKR SGF F R IK +NPGI+ D+ + LGE W +S E++P
Sbjct: 82 KKGKRNKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDIAKKLGEMWNNLSDGEKQP 141
Query: 490 YESKARADKKRYKDEISGYKN 510
Y +KA K++Y+ +++ YK+
Sbjct: 142 YNNKAAKLKEKYEKDVADYKS 162
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 435 KKDPNAPKRAMSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYES 492
K+DP PK MS + +F Q RE KK NP I F + + ERW+ MS +E+ +E
Sbjct: 3 KRDPKKPKGKMSAYAYFVQTCREEHKKKNPEIPVNFAEFSKKCSERWRSMSGKEKSKFED 62
Query: 493 KARADKKRYKDEISGY 508
A+ADK RY E+ +
Sbjct: 63 LAKADKVRYDREMKDF 78
>gi|336465411|gb|EGO53651.1| hypothetical protein NEUTE1DRAFT_106544 [Neurospora tetrasperma
FGSC 2508]
gi|350295304|gb|EGZ76281.1| hypothetical protein NEUTE2DRAFT_122932 [Neurospora tetrasperma
FGSC 2509]
Length = 592
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 428 KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEER 487
+K ++ K D NAP+R S ++ FS RE++K N ++FT++ +++GE W+ ++ E+
Sbjct: 111 RKYRRHPKADENAPERPPSAYVLFSNKMREDLKGRN--LSFTEIAKLVGENWQNLTPAEK 168
Query: 488 EPYESKARADKKRYKDEISGYK 509
EPYESKA+A K++Y E++ YK
Sbjct: 169 EPYESKAQAYKEKYHAELAEYK 190
>gi|336274626|ref|XP_003352067.1| hypothetical protein SMAC_00615 [Sordaria macrospora k-hell]
gi|380096352|emb|CCC06400.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 595
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 428 KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEER 487
+K ++ K D NAP+R S ++ FS RE++K N ++FT++ +++GE W+ ++ E+
Sbjct: 107 RKYRRHPKADENAPERPPSAYVLFSNKMREDLKGRN--LSFTEIAKLVGENWQNLTPAEK 164
Query: 488 EPYESKARADKKRYKDEISGYK 509
EPYESKA+A K++Y E++ YK
Sbjct: 165 EPYESKAQAYKEKYHAELAEYK 186
>gi|157129203|ref|XP_001655323.1| high mobility group B1, putative [Aedes aegypti]
gi|108872320|gb|EAT36545.1| AAEL011380-PA [Aedes aegypti]
Length = 278
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 49/83 (59%)
Query: 427 GKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEE 486
G+ KK+K KDPNAPKR++S F +F ER +K NP D+ + LG +W M E
Sbjct: 118 GRGKKRKAFKDPNAPKRSLSAFFWFCHDERNKVKALNPEYGVGDIAKELGRKWSDMDAEV 177
Query: 487 REPYESKARADKKRYKDEISGYK 509
+ YE A DK RY+ E++ YK
Sbjct: 178 KSKYEQMAEKDKARYEQEMTEYK 200
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 439 NAPKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
N P+ M+ + FF Q RE KK +P + F + R ERWK M +E++ + A
Sbjct: 38 NKPRGRMTAYAFFVQTCREEHKKKHPEEQVIFAEFSRKCAERWKTMLDKEKQRFHEMAEK 97
Query: 497 DKKRYKDEISGYKNPKPMDIDSG 519
DK+RY+ E+ Y PK + G
Sbjct: 98 DKQRYELEMQNYVPPKGTVVGRG 120
>gi|444730168|gb|ELW70558.1| High mobility group protein B3 [Tupaia chinensis]
Length = 369
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 50/74 (67%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR +SGF FS R IK +NPGI+ DV + LG+ W +S E++PY +KA
Sbjct: 89 DPNAPKRPLSGFFLFSSEFRPKIKSTNPGISIGDVAKKLGDMWNNLSDSEKQPYITKAAK 148
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 149 LKEKYEKDVANYKS 162
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 445 MSGFIFFSQMERENIKKSN---PGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRY 501
MS + FF Q RE KK N P + F + + ERWK MS +E+ ++ A+ADK RY
Sbjct: 13 MSAYAFFVQTCREEHKKKNLEVP-VNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRY 71
Query: 502 KDEISGY 508
E Y
Sbjct: 72 DRETKDY 78
>gi|412992276|emb|CCO19989.1| nucleosome binding protein [Bathycoccus prasinos]
Length = 94
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 47/73 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR +S + FF +R + K+NP + T+VG+ LGE W+ MS E+ PY KA A
Sbjct: 20 DPNAPKRNLSAYFFFMNDQRAKVVKANPDMKVTEVGKKLGELWRAMSDSEKVPYNKKADA 79
Query: 497 DKKRYKDEISGYK 509
DK RY+ + YK
Sbjct: 80 DKVRYEKAKAAYK 92
>gi|46394418|gb|AAS91553.1| AmphiHMG1/2 [Branchiostoma belcheri tsingtauense]
Length = 222
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 58/88 (65%), Gaps = 2/88 (2%)
Query: 423 GDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKM 482
G E G++K+ KKKDPNAPKRAMS F + R ++ ++P D+ ++LG++WK++
Sbjct: 82 GAEGGRRKR--KKKDPNAPKRAMSAFFMYCADARPKVRAAHPDFQVGDIAKILGKQWKEI 139
Query: 483 SVEEREPYESKARADKKRYKDEISGYKN 510
S ++ YE KA+ +K RY+ E++ YK
Sbjct: 140 SDSDKAKYEKKAQTEKARYQKELAEYKR 167
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 436 KDPNAPKRAMSGFIFFSQ-MERENIKK-SNPGIAFTDVGRVLGERWKKMSVEEREPYESK 493
KD N PK MS + F Q RE+ KK N + FT+ + RWK M+ +E++ +++
Sbjct: 3 KDKNKPKGKMSAYACFVQECRREHEKKYPNKQVVFTEFSQKCASRWKTMNDDEKKRFQAL 62
Query: 494 ARADKKRYKDEISGYKNPK 512
A ADK+RY+ +++ Y PK
Sbjct: 63 AEADKRRYEQDMAKYVPPK 81
>gi|85110964|ref|XP_963712.1| hypothetical protein NCU02819 [Neurospora crassa OR74A]
gi|28925429|gb|EAA34476.1| hypothetical protein NCU02819 [Neurospora crassa OR74A]
Length = 597
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 428 KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEER 487
+K ++ K D NAP+R S ++ FS RE++K N ++FT++ +++GE W+ ++ E+
Sbjct: 111 RKYRRHPKADENAPERPPSAYVLFSNKMREDLKGRN--LSFTEIAKLVGENWQNLTPAEK 168
Query: 488 EPYESKARADKKRYKDEISGYK 509
EPYESKA+A K++Y E++ YK
Sbjct: 169 EPYESKAQAYKEKYHAELAEYK 190
>gi|328769557|gb|EGF79601.1| hypothetical protein BATDEDRAFT_89692 [Batrachochytrium
dendrobatidis JAM81]
Length = 99
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 56/79 (70%)
Query: 431 KQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPY 490
K+K +KDP+APKR +S F+ FS+ R I++ NP +F D+G++LG W++++ ++++ Y
Sbjct: 19 KKKSRKDPDAPKRPLSAFMIFSKENRPRIREENPDASFGDLGKLLGAAWRELNDKDKQVY 78
Query: 491 ESKARADKKRYKDEISGYK 509
KA DK RY+ E+S YK
Sbjct: 79 TDKADEDKGRYEREMSTYK 97
>gi|221502212|gb|EEE27950.1| HMG box domain-containing protein, putative [Toxoplasma gondii VEG]
Length = 177
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 49/70 (70%), Gaps = 2/70 (2%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGI--AFTDVGRVLGERWKKMSVEEREPYESKA 494
DPNAP+RA+S F+FF++ +R I +NP + T VG+++GE W K++ EER+P+E KA
Sbjct: 100 DPNAPRRALSAFMFFAKEKRTEIVAANPELKSQMTKVGKMVGEAWGKLTPEERKPFEEKA 159
Query: 495 RADKKRYKDE 504
DK RY E
Sbjct: 160 AQDKARYLSE 169
>gi|221481732|gb|EEE20108.1| HMG box domain-containing protein, putative [Toxoplasma gondii GT1]
Length = 177
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 49/70 (70%), Gaps = 2/70 (2%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGI--AFTDVGRVLGERWKKMSVEEREPYESKA 494
DPNAP+RA+S F+FF++ +R I +NP + T VG+++GE W K++ EER+P+E KA
Sbjct: 100 DPNAPRRALSAFMFFAKEKRTEIVAANPELKSQMTKVGKMVGEAWGKLTPEERKPFEEKA 159
Query: 495 RADKKRYKDE 504
DK RY E
Sbjct: 160 AQDKARYLSE 169
>gi|323452103|gb|EGB07978.1| hypothetical protein AURANDRAFT_17746 [Aureococcus anophagefferens]
Length = 83
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 55/81 (67%)
Query: 428 KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEER 487
+K+K++++KDP APK A S +++FS+ R +K+ N + F D+G+ +G WK + +E+
Sbjct: 3 RKRKERREKDPKAPKSATSAYMYFSKHHRLLLKRENSDLTFGDLGKTVGAMWKAATPQEK 62
Query: 488 EPYESKARADKKRYKDEISGY 508
+P+E A AD+ RY E+S Y
Sbjct: 63 KPFEDLAAADRTRYNSELSEY 83
>gi|358060355|dbj|GAA93760.1| hypothetical protein E5Q_00406 [Mixia osmundae IAM 14324]
Length = 119
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 54/80 (67%)
Query: 429 KKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEERE 488
KK KK+KDPNAPKR +S ++F+SQ +R +K+ NP +F ++G++LG +WK + E++
Sbjct: 35 KKSGKKEKDPNAPKRPLSAYMFYSQDKRTQVKEDNPDASFGELGKILGAQWKDLDESEKK 94
Query: 489 PYESKARADKKRYKDEISGY 508
Y A DK+RY + + Y
Sbjct: 95 QYNDMATRDKERYTNAKAAY 114
>gi|325181980|emb|CCA16434.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 204
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%)
Query: 439 NAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADK 498
NAPKRA+S F+FFS R+ +KK P + F + +G+RWK+ E+R PYE A ADK
Sbjct: 23 NAPKRALSAFMFFSNDIRDQVKKEMPELEFLQISTEIGKRWKQCKPEDRRPYEELAEADK 82
Query: 499 KRYKDEISGY 508
KRY++E Y
Sbjct: 83 KRYQEEKEDY 92
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 46/76 (60%)
Query: 433 KKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYES 492
+KKKDP+APKRA+S + FF R+ +++ NP T++ +L E+W+ + ++R Y
Sbjct: 105 RKKKDPDAPKRALSAYFFFCNEARDALRQENPDKKITEIASLLAEKWRNLPEKKRVKYHK 164
Query: 493 KARADKKRYKDEISGY 508
K +Y++++ Y
Sbjct: 165 MHEGAKVKYQEQMDVY 180
>gi|358391483|gb|EHK40887.1| hypothetical protein TRIATDRAFT_321166 [Trichoderma atroviride IMI
206040]
Length = 523
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 58/89 (65%), Gaps = 2/89 (2%)
Query: 422 DGDEDGKKK-KQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWK 480
DG K+K ++ K D NAP+R MS ++ FS RE++K + + FT++ +++GE W+
Sbjct: 95 DGSSGPKRKYRRHPKPDENAPERPMSAYVLFSNRLRESLK-GDRSLTFTEIAKLVGEHWQ 153
Query: 481 KMSVEEREPYESKARADKKRYKDEISGYK 509
+S+ ERE YE +AR K+RY E++ YK
Sbjct: 154 NLSLPEREVYEGQARQSKERYYREMAVYK 182
>gi|397582113|gb|EJK52170.1| hypothetical protein THAOC_28594 [Thalassiosira oceanica]
Length = 578
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 54/81 (66%)
Query: 430 KKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREP 489
+K + KK+P APKR MS F+ ++Q +R+ ++ NP ++ DV R+LGE W+ +E++ P
Sbjct: 423 RKVRAKKNPLAPKRPMSAFLMYAQRQRKIVQGDNPDLSNADVSRLLGEHWRNAKIEQKRP 482
Query: 490 YESKARADKKRYKDEISGYKN 510
+ + +A++K YK + +KN
Sbjct: 483 FLEREKAERKIYKAKTEAFKN 503
>gi|225195621|gb|ACN82088.1| high-mobility group box 1 [Carassius auratus x Megalobrama
amblycephala]
Length = 193
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 52/80 (65%)
Query: 431 KQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPY 490
K+K+ KDPNAPKR S F F R +K+ PG++ DV + LGE W K S EE++PY
Sbjct: 73 KKKRFKDPNAPKRPPSAFFIFCAEFRPKVKEETPGLSIGDVAKKLGEMWNKTSSEEKQPY 132
Query: 491 ESKARADKKRYKDEISGYKN 510
E KA K++Y+ +I+ Y++
Sbjct: 133 EKKAARLKEKYEKDITAYRS 152
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 445 MSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + +F Q RE KK +P + F++ + ERWK MS +E+ +E A+ DK RY+
Sbjct: 1 MSSYAYFVQTCREEHKKKHPEATVNFSEFSKKCSERWKTMSAKEKGKFEDMAKLDKARYE 60
Query: 503 DEISGYKNPK 512
E+ Y PK
Sbjct: 61 REMKNYIPPK 70
>gi|410917315|ref|XP_003972132.1| PREDICTED: high mobility group protein B2-like [Takifugu rubripes]
Length = 214
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 52/83 (62%)
Query: 427 GKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEE 486
G K +KKKKDPNAPKR S F F R IK+ NPGI+ D+ + LGE W ++
Sbjct: 81 GSKVSRKKKKDPNAPKRPPSAFFVFCSDHRPKIKEDNPGISIGDIAKKLGELWSTQGPKD 140
Query: 487 REPYESKARADKKRYKDEISGYK 509
+ PYE++A K++Y+ +++ YK
Sbjct: 141 KAPYEARAAKLKEKYEKDVAAYK 163
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 436 KDPNAPKRAMSGFIFFSQMERENIKKSNPG--IAFTDVGRVLGERWKKMSVEEREPYESK 493
KD PK MS + FF R+ KK +PG + F++ + ERWK MS +E+ +E
Sbjct: 2 KDHGRPKGKMSSYAFFVTTCRDEHKKKHPGTPVNFSEFSKKCSERWKNMSSKEKSKFEEL 61
Query: 494 ARADKKRYKDEISGYKNPK 512
A+ DK RY E+ Y PK
Sbjct: 62 AKTDKIRYDQEMQSYVPPK 80
>gi|226288855|gb|EEH44367.1| hypothetical protein PADG_00656 [Paracoccidioides brasiliensis
Pb18]
Length = 66
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 44/53 (83%)
Query: 456 RENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGY 508
R+N+++ NPGI+F VG+VLGERWK ++ ++R PYE+KA ADKKRY+DE + Y
Sbjct: 4 RDNVREENPGISFGQVGKVLGERWKALNEKQRAPYEAKAAADKKRYEDEKASY 56
>gi|427787117|gb|JAA59010.1| Putative dorsal switch protein 1 [Rhipicephalus pulchellus]
Length = 208
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 53/86 (61%)
Query: 428 KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEER 487
K KK+K+ KDPNAPKR +S F +F ER N+++ NP + +V + LG RW ++ + +
Sbjct: 83 KSKKRKRAKDPNAPKRPLSAFFWFCNDERPNVRQENPDSSVGEVAKELGRRWNEVGDDVK 142
Query: 488 EPYESKARADKKRYKDEISGYKNPKP 513
YE A DK RY+ E+ YK KP
Sbjct: 143 AKYEGLAAKDKARYEKELKAYKGKKP 168
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 441 PKRAMSGFIFFSQMERENIKKSNPG--IAFTDVGRVLGERWKKMSVEEREPYESKARADK 498
P+ MS + FF Q RE KK +P + F + + ERWK MS E++ + A DK
Sbjct: 7 PRGRMSAYAFFVQTCREEHKKKHPNENVVFAEFSKKCAERWKTMSDGEKKRFHQMADKDK 66
Query: 499 KRYKDEISGYKNPK 512
KR+ E++ YK PK
Sbjct: 67 KRFDTEMADYKPPK 80
>gi|323456782|gb|EGB12648.1| hypothetical protein AURANDRAFT_17678, partial [Aureococcus
anophagefferens]
Length = 82
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 52/78 (66%)
Query: 432 QKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYE 491
++++KDP APK S +IFF +R +K+ +P + DVGR LG RWK +S ++++PY
Sbjct: 2 KRRRKDPGAPKGRRSAYIFFGNAKRAEVKELHPDFSLGDVGRELGARWKALSDDDKKPYA 61
Query: 492 SKARADKKRYKDEISGYK 509
+ A AD +RY E++ YK
Sbjct: 62 ALATADAERYDREMAAYK 79
>gi|402583047|gb|EJW76991.1| hypothetical protein WUBG_12099 [Wuchereria bancrofti]
Length = 170
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 50/79 (63%)
Query: 423 GDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKM 482
G ED +K+++ KKDPNAPKRA+S F FFS +R +++ +P V + LG WK +
Sbjct: 79 GGEDALRKRKRVKKDPNAPKRALSAFFFFSHDKRPEVQQQHPEWKVGQVAQELGRFWKAL 138
Query: 483 SVEEREPYESKARADKKRY 501
EER YE KA DK+RY
Sbjct: 139 GEEERAVYERKALEDKERY 157
Score = 38.5 bits (88), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 446 SGFIFFSQMERENIKKSNPG--IAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKD 503
S + FF +M E KK P + T++ + E+WK MS +E+ + A+ D +RY+
Sbjct: 14 SPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMSDDEKRRFFELAQKDAERYQA 73
Query: 504 EISGY 508
E++ Y
Sbjct: 74 EVAAY 78
>gi|219119941|ref|XP_002180721.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408194|gb|EEC48129.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 90
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 54/85 (63%)
Query: 424 DEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMS 483
D +K+ ++ KDP APKRA ++FF+ R + + PGI F D+G+VLGERW+ ++
Sbjct: 4 DHRPRKRNKRGPKDPAAPKRASGAYVFFTNEMRPKVLQEFPGIKFVDLGKVLGERWRALT 63
Query: 484 VEEREPYESKARADKKRYKDEISGY 508
EE++ +E A DK R++ E+ Y
Sbjct: 64 PEEKKRFEEVATEDKIRFQMEMQQY 88
>gi|339242839|ref|XP_003377345.1| high mobility group protein 1.2 [Trichinella spiralis]
gi|316973861|gb|EFV57410.1| high mobility group protein 1.2 [Trichinella spiralis]
Length = 229
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 57/91 (62%)
Query: 426 DGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVE 485
DG +K+++ KKDPNAPKRA+S F FFS +R I++++P V + LG WK + +
Sbjct: 109 DGLRKRKRSKKDPNAPKRALSAFFFFSNSKRAEIQQAHPDWKVGQVAQELGRMWKAIDED 168
Query: 486 EREPYESKARADKKRYKDEISGYKNPKPMDI 516
E+ +E A D+ RY++++ YK+ D+
Sbjct: 169 EKRKFEDMAAKDRTRYEEDMKNYKSGGKSDV 199
>gi|431920081|gb|ELK18129.1| High mobility group protein B3 [Pteropus alecto]
Length = 255
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF F R IK +NPGI+ DV + LGE W +S E++PY +KA
Sbjct: 141 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAK 200
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 201 LKEKYEKDVADYKS 214
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 59/128 (46%), Gaps = 14/128 (10%)
Query: 383 GEEDSDASESGGEKEKPAKKESKKESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPK 442
G ED + E GGEK+ K + + + DG + G K + PK
Sbjct: 15 GTEDRSSVEGGGEKQLDLGDIQKTKLTEL---------VDGMDMGIKMAKGDP---KKPK 62
Query: 443 RAMSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKR 500
MS + FF Q RE KK NP + F + + ERWK MS +E+ ++ A+ADK R
Sbjct: 63 GKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVR 122
Query: 501 YKDEISGY 508
Y E+ Y
Sbjct: 123 YDREMKDY 130
>gi|551090|gb|AAA50238.1| DNA-binding protein [Drosophila melanogaster]
Length = 393
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 50/80 (62%)
Query: 430 KKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREP 489
KK+K+ KDPNAPKR++S F +F ER +K NP D+ + LG +W + E ++
Sbjct: 260 KKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEVKQK 319
Query: 490 YESKARADKKRYKDEISGYK 509
YES A DK RY+ E++ YK
Sbjct: 320 YESMAERDKARYEREMTEYK 339
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 441 PKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESKARADK 498
P+ M+ + +F Q RE KK +P + F + R ERWK M +E++ + A DK
Sbjct: 179 PRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEKDK 238
Query: 499 KRYKDEISGYKNPKPMDIDSG 519
+RY+ E+ Y PK D G
Sbjct: 239 QRYEAEMQNYVPPKGALWDRG 259
>gi|320168039|gb|EFW44938.1| hypothetical protein CAOG_02944 [Capsaspora owczarzaki ATCC 30864]
Length = 193
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 55/91 (60%)
Query: 432 QKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYE 491
+K +KDPN PK+ + F++FS RE +K NPG+ TD+ VLG+ W ++ +++ Y+
Sbjct: 6 KKDEKDPNKPKKPTTAFMYFSNAMRERVKTQNPGLKMTDIASVLGKLWGQLPEADKDKYQ 65
Query: 492 SKARADKKRYKDEISGYKNPKPMDIDSGNES 522
+ A +DK+RY + GY P SG +S
Sbjct: 66 TMANSDKERYAKAMDGYVAPVSTGGKSGKKS 96
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 48/80 (60%)
Query: 430 KKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREP 489
K KK KDPNAPKR S +I F+ R ++K+ P + +GE W++++ + +EP
Sbjct: 91 KSGKKSKDPNAPKRPPSAYICFANAVRPELRKTYPSDTMPAISTKIGELWRQLTDDNKEP 150
Query: 490 YESKARADKKRYKDEISGYK 509
Y +A A K +++ E++ YK
Sbjct: 151 YNKQAEALKLKFQTEMAAYK 170
>gi|225195617|gb|ACN82086.1| high-mobility group box 1 [Carassius auratus]
gi|225195619|gb|ACN82087.1| high-mobility group box 1 [Megalobrama amblycephala]
gi|225195623|gb|ACN82089.1| high-mobility group box 1 [Carassius auratus x Megalobrama
amblycephala]
Length = 193
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 52/80 (65%)
Query: 431 KQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPY 490
K+K+ KDPNAPKR S F F R +K+ PG++ DV + LGE W K S EE++P+
Sbjct: 73 KKKRFKDPNAPKRPPSAFFIFCSEFRPKVKEETPGLSIGDVAKKLGEMWNKTSAEEKQPF 132
Query: 491 ESKARADKKRYKDEISGYKN 510
E KA K++Y+ +I+ Y++
Sbjct: 133 EKKAARLKEKYEKDITAYRS 152
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 445 MSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + +F Q RE KK +P + F++ + ERWK MS +E+ +E A+ DK RY+
Sbjct: 1 MSSYAYFVQTCREEHKKKHPEATVNFSEFSKKCSERWKTMSAKEKGKFEDMAKQDKVRYE 60
Query: 503 DEISGYKNPK 512
E+ Y PK
Sbjct: 61 REMKNYIPPK 70
>gi|255074119|ref|XP_002500734.1| high-mobility protein [Micromonas sp. RCC299]
gi|226515997|gb|ACO61992.1| high-mobility protein [Micromonas sp. RCC299]
Length = 153
Score = 73.6 bits (179), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/73 (42%), Positives = 49/73 (67%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPK+ +S +I F++ R + NPG++ T+V + LG RWK + EE+ +E+KA+
Sbjct: 74 DPNAPKKPLSAYIIFTKERRSAVVAENPGLSLTEVTKELGARWKAIGAEEKSVFEAKAKK 133
Query: 497 DKKRYKDEISGYK 509
DK+RY E+ Y+
Sbjct: 134 DKERYAVEMEAYE 146
>gi|195167323|ref|XP_002024483.1| GL15829 [Drosophila persimilis]
gi|194107881|gb|EDW29924.1| GL15829 [Drosophila persimilis]
Length = 173
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 52/83 (62%)
Query: 427 GKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEE 486
G+ KK+K+ KDPNAPKR++S F +F ER +K NP D+ + LG +W + E
Sbjct: 36 GRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEYGVGDIAKELGRKWSDVDPEV 95
Query: 487 REPYESKARADKKRYKDEISGYK 509
++ YES A DK RY+ E++ YK
Sbjct: 96 KQKYESMAERDKARYEREMTEYK 118
>gi|405975742|gb|EKC40290.1| High mobility group protein DSP1 [Crassostrea gigas]
Length = 201
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 430 KKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREP 489
K++K+ KDPNAPKRA+S F FF ER +++ ++P + +V + LG+RW+K V R
Sbjct: 87 KRKKRAKDPNAPKRALSAFFFFCGDERPDVRAAHPEWSVAEVAKELGKRWEK--VTNRSK 144
Query: 490 YESKARADKKRYKDEISGYK 509
+E++A ADK RY E+ Y+
Sbjct: 145 FEARAEADKARYAKEMEAYR 164
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 441 PKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESKARADK 498
P+ MS + FF Q RE KK P + F + + ++WK+MS +E+ +E A DK
Sbjct: 8 PRGRMSSYAFFVQTCREEHKKKCPDENVVFAEFTKKCAQKWKEMSAKEKRRFEEMAERDK 67
Query: 499 KRYKDEISGYKNP 511
RY+ +++ Y P
Sbjct: 68 SRYEKDMANYDPP 80
>gi|443726517|gb|ELU13637.1| hypothetical protein CAPTEDRAFT_158220 [Capitella teleta]
Length = 198
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 431 KQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPY 490
K+K+ KDPNAPKRA+S F FF ER ++KK+ P + +V + LG+RW+ V +R +
Sbjct: 85 KRKRTKDPNAPKRALSAFFFFCHHERPSVKKTMPNSSVGEVAKELGKRWE--GVTDRTRF 142
Query: 491 ESKARADKKRYKDEISGYKN 510
E AR DKKRY+ +++ YK
Sbjct: 143 EVMARDDKKRYEKDMAIYKK 162
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 441 PKRAMSGFIFFSQMERENIKKSNPG--IAFTDVGRVLGERWKKMSVEEREPYESKARADK 498
P+ MS + FF Q RE KK +PG + F + + ERWK MS +E++ +E A DK
Sbjct: 8 PRGKMSSYAFFVQTCREEHKKKHPGESVVFAEFSKKCAERWKTMSAKEKKRFEEMAEKDK 67
Query: 499 KRYKDEISGY 508
RY+ +++GY
Sbjct: 68 ARYEKDMAGY 77
>gi|395545985|ref|XP_003774876.1| PREDICTED: high mobility group protein B3-like [Sarcophilus
harrisii]
Length = 201
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF F R IK +NPGI+ DV + LGE W +S E++PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAK 148
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 149 LKEKYEKDVADYKS 162
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE KK NP + F + + ERWK MS +E+ ++ A+ADK RY
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 503 DEISGY 508
E+ Y
Sbjct: 73 REMKDY 78
>gi|149410917|ref|XP_001509199.1| PREDICTED: high mobility group protein B3-like isoform 1
[Ornithorhynchus anatinus]
gi|345306624|ref|XP_003428488.1| PREDICTED: high mobility group protein B3-like isoform 2
[Ornithorhynchus anatinus]
Length = 201
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF F R IK +NPGI+ DV + LGE W +S E++PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAK 148
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 149 LKEKYEKDVADYKS 162
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE KK NP + F + + ERWK MS +E+ ++ A+ADK RY
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 503 DEISGY 508
E+ Y
Sbjct: 73 REMKDY 78
>gi|237832349|ref|XP_002365472.1| HMG box domain-containing protein [Toxoplasma gondii ME49]
gi|211963136|gb|EEA98331.1| HMG box domain-containing protein [Toxoplasma gondii ME49]
Length = 98
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 49/70 (70%), Gaps = 2/70 (2%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGI--AFTDVGRVLGERWKKMSVEEREPYESKA 494
DPNAP+RA+S F+FF++ +R I +NP + T VG+++GE W K++ EER+P+E KA
Sbjct: 21 DPNAPRRALSAFMFFAKEKRTEIVAANPELKSQMTKVGKMVGEAWGKLTPEERKPFEEKA 80
Query: 495 RADKKRYKDE 504
DK RY E
Sbjct: 81 AQDKARYLSE 90
>gi|346986304|ref|NP_001069753.2| high mobility group protein B3 isoform 1 [Bos taurus]
Length = 274
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF F R IK +NPGI+ DV + LGE W +S E++PY +KA
Sbjct: 163 DPNAPKRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAK 222
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 223 LKEKYEKDVADYKS 236
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE KK NP + F + + ERWK MS +E+ ++ A+ADK RY
Sbjct: 87 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 146
Query: 503 DEISGY 508
E+ Y
Sbjct: 147 REMKDY 152
>gi|254826706|ref|NP_001157151.1| high mobility group protein B3 [Monodelphis domestica]
gi|253756818|gb|ACT35166.1| HmgB3x [Monodelphis domestica]
Length = 201
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF F R IK +NPGI+ DV + LGE W +S E++PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDNEKQPYNNKAAK 148
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 149 LKEKYEKDVADYKS 162
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE KK NP + F + + ERWK MS +E+ ++ A+ADK RY
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 503 DEISGY 508
E+ Y
Sbjct: 73 REMKDY 78
>gi|299472000|emb|CBN80083.1| high mobility group protein [Ectocarpus siliculosus]
Length = 242
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 54/79 (68%)
Query: 432 QKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYE 491
++ KKDP APKRAMS F+ FSQ R ++++ P D+ ++LG+ W +MS EE+ PY+
Sbjct: 131 KRAKKDPLAPKRAMSAFLHFSQSMRPRLRETYPEAKNMDMSKMLGQEWNRMSDEEKLPYQ 190
Query: 492 SKARADKKRYKDEISGYKN 510
+KA D RY++ ++ +K+
Sbjct: 191 TKAHDDTLRYREAMTVWKD 209
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 438 PNAPKRAMSGFIFFSQMERENIKKSNP-GIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
P+AP+R S ++ FS RE +K + P G T+V + + +W+++S ++E + +KA
Sbjct: 51 PDAPRRGRSAYVLFSMEAREEVKNALPEGSKVTEVMKGIAAKWRELSETDKEEWTAKAAQ 110
Query: 497 DKKRYKDEISGYKNP 511
DK RY+ E+S Y P
Sbjct: 111 DKDRYEQELSVYDGP 125
>gi|281338637|gb|EFB14221.1| hypothetical protein PANDA_014002 [Ailuropoda melanoleuca]
Length = 168
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF F R IK +NPGI+ DV + LGE W +S E++PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAK 148
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 149 LKEKYEKDVADYKS 162
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE KK NP + F + + ERWK MS +E+ ++ A+ADK RY
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 503 DEISGY 508
E+ Y
Sbjct: 73 REMKDY 78
>gi|392354293|ref|XP_003751730.1| PREDICTED: high mobility group protein B3-like isoform 1 [Rattus
norvegicus]
Length = 241
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 68/121 (56%), Gaps = 14/121 (11%)
Query: 404 SKKESSSVKASTSKKKS--------------RDGDEDGKKKKQKKKKDPNAPKRAMSGFI 449
SKK S K +SK+KS R+ + G K KKKKDPNAPKR SGF
Sbjct: 83 SKKCSERWKTMSSKEKSKFDEMAKADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSGFF 142
Query: 450 FFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
F R IK +NPGI+ DV + LGE W +S E++PY +KA K++Y+ +++ YK
Sbjct: 143 LFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYMTKAAKLKEKYEKDVADYK 202
Query: 510 N 510
+
Sbjct: 203 S 203
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE KK NP + F + + ERWK MS +E+ ++ A+ADK RY
Sbjct: 54 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAKADKVRYD 113
Query: 503 DEISGY 508
E+ Y
Sbjct: 114 REMKDY 119
>gi|1085210|pir||S48708 high-mobility-group-1 protein - trout
Length = 204
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 51/80 (63%)
Query: 431 KQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPY 490
K+K+ KDPNAPKR S F F R +K PG++ DV + LGE+W ++ E++ PY
Sbjct: 84 KKKRFKDPNAPKRPSSAFFIFCADFRPQVKGETPGLSIGDVAKKLGEKWNNLTAEDKVPY 143
Query: 491 ESKARADKKRYKDEISGYKN 510
E KA K++Y+ +I+ Y+N
Sbjct: 144 EKKASKLKEKYEKDITAYRN 163
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 436 KDPNAPKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESK 493
KDP P+ MS + +F Q R KK +P + F++ + ERWK MS +E+ +E
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCRIEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDL 62
Query: 494 ARADKKRYKDEISGYKNPK 512
A+ DK RY+ E+ Y PK
Sbjct: 63 AKLDKVRYEREMRSYIPPK 81
>gi|148694630|gb|EDL26577.1| mCG10155, isoform CRA_d [Mus musculus]
Length = 220
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF F R IK +NPGI+ DV + LGE W +S E++PY +KA
Sbjct: 109 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDNEKQPYVTKAAK 168
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 169 LKEKYEKDVADYKS 182
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE KK NP + F + + ERWK MS +E+ ++ A+ADK RY
Sbjct: 33 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAKADKVRYD 92
Query: 503 DEISGY 508
E+ Y
Sbjct: 93 REMKDY 98
>gi|410989557|ref|XP_004001438.1| PREDICTED: LOW QUALITY PROTEIN: high mobility group protein B3
[Felis catus]
Length = 201
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF F R IK +NPGI+ DV + LGE W +S E++PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAK 148
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 149 LKEKYEKDVADYKS 162
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE KK NP + F + + ERWK MS +E+ ++ A+ADK RY
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 503 DEISGY 508
E+ Y
Sbjct: 73 REMKDY 78
>gi|387914026|gb|AFK10622.1| high mobility group box 3 [Callorhinchus milii]
Length = 210
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 50/81 (61%)
Query: 430 KKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREP 489
K KKKKDPNAPKR SGF F R IK +PG+ DV + LGE W + EE++P
Sbjct: 89 KGSKKKKDPNAPKRPPSGFFLFCSDHRPKIKAGSPGLTIGDVAKKLGELWNGCTDEEKKP 148
Query: 490 YESKARADKKRYKDEISGYKN 510
Y +KA K++Y+ +++ Y+
Sbjct: 149 YNAKAAKLKEKYEKDVADYRT 169
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 435 KKDPNAPKRAMSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYES 492
K+DP P+ MS + +F Q RE KK NP + F+D + ERWK MS +E+ +E
Sbjct: 10 KRDPKKPRGKMSSYAYFVQTCREEHKKKNPDVPVNFSDFSKRCSERWKTMSGKEKSKFED 69
Query: 493 KARADKKRYKDEISGYKNPK 512
A+ DK RY E+ Y PK
Sbjct: 70 LAKVDKVRYDREMKTYIPPK 89
>gi|344299188|ref|XP_003421269.1| PREDICTED: high mobility group protein B3-like [Loxodonta africana]
Length = 200
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF F R IK +NPGI+ DV + LGE W +S E++PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDNEKQPYNNKAAK 148
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 149 LKEKYEKDVADYKS 162
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE KK NP + F + + ERWK MS +E+ ++ A+ADK RY
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 503 DEISGY 508
E+ Y
Sbjct: 73 REMKDY 78
>gi|57112857|ref|XP_538194.1| PREDICTED: high mobility group protein B3 [Canis lupus familiaris]
gi|338729649|ref|XP_001505130.3| PREDICTED: high mobility group protein B3-like isoform 1 [Equus
caballus]
Length = 201
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF F R IK +NPGI+ DV + LGE W +S E++PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAK 148
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 149 LKEKYEKDVADYKS 162
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE KK NP + F + + ERWK MS +E+ ++ A+ADK RY
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 503 DEISGY 508
E+ Y
Sbjct: 73 REMKDY 78
>gi|417396975|gb|JAA45521.1| Putative nucleosome-binding factor spn pob3 subunit [Desmodus
rotundus]
Length = 200
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF F R IK +NPGI+ DV + LGE W +S E++PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAK 148
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 149 LKEKYEKDVADYKS 162
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE KK NP + F + + ERWK MS +E+ ++ A+ADK RY
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 503 DEISGY 508
E+ Y
Sbjct: 73 REMKDY 78
>gi|301778413|ref|XP_002924621.1| PREDICTED: high mobility group protein B3-like [Ailuropoda
melanoleuca]
Length = 201
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF F R IK +NPGI+ DV + LGE W +S E++PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAK 148
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 149 LKEKYEKDVADYKS 162
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE KK NP + F + + ERWK MS +E+ ++ A+ADK RY
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 503 DEISGY 508
E+ Y
Sbjct: 73 REMKDY 78
>gi|609551|gb|AAA58771.1| HMG-1 [Oncorhynchus mykiss]
Length = 204
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 51/80 (63%)
Query: 431 KQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPY 490
K+K+ KDPNAPKR S F F R +K PG++ DV + LGE+W ++ E++ PY
Sbjct: 84 KKKRFKDPNAPKRPSSAFFIFCADFRPQVKGETPGLSIGDVAKKLGEKWNNLTAEDKVPY 143
Query: 491 ESKARADKKRYKDEISGYKN 510
E KA K++Y+ +I+ Y+N
Sbjct: 144 EKKASKLKEKYEKDITAYRN 163
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 436 KDPNAPKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESK 493
KDP P+ MS + +F Q RE KK +P + F++ + ERWK MS +E+ +E
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDL 62
Query: 494 ARADKKRYKDEISGYKNPK 512
A+ DK RY+ E+ Y PK
Sbjct: 63 AKLDKVRYEREMRSYIPPK 81
>gi|392877702|gb|AFM87683.1| high mobility group box 3 [Callorhinchus milii]
Length = 203
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 50/81 (61%)
Query: 430 KKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREP 489
K KKKKDPNAPKR SGF F R IK +PG+ DV + LGE W + EE++P
Sbjct: 82 KGSKKKKDPNAPKRPPSGFFLFCSDHRPKIKAGSPGLTIGDVAKKLGELWNGCTDEEKKP 141
Query: 490 YESKARADKKRYKDEISGYKN 510
Y +KA K++Y+ +++ Y+
Sbjct: 142 YNAKAAKLKEKYEKDVADYRT 162
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 435 KKDPNAPKRAMSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYES 492
K+DP P+ MS + +F Q RE KK NP + F+D + ERWK MS +E+ +E
Sbjct: 3 KRDPKKPRGKMSSYAYFVQTCREEHKKKNPDVPVNFSDFSKRCSERWKTMSGKEKSKFED 62
Query: 493 KARADKKRYKDEISGYKNPK 512
A+ DK RY E+ Y PK
Sbjct: 63 LAKVDKVRYDREMKTYIPPK 82
>gi|253756810|gb|ACT35162.1| HmgB3y, partial [Monodelphis domestica]
Length = 193
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF F R IK +NPGI+ DV + LGE W +S E++PY +KA
Sbjct: 86 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDNEKQPYNNKAAK 145
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 146 LKEKYEKDVADYKS 159
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKA 494
DP PK MS + FF Q RE KK NP + F + + ERWK MS +E+ ++ A
Sbjct: 2 DPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKNMSGKEKSKFDEMA 61
Query: 495 RADKKRYKDEISGY 508
+ADK RY E+ Y
Sbjct: 62 KADKLRYDREMKDY 75
>gi|395857208|ref|XP_003800997.1| PREDICTED: high mobility group protein B3-like [Otolemur garnettii]
Length = 225
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 68/121 (56%), Gaps = 14/121 (11%)
Query: 404 SKKESSSVKASTSKKKS--------------RDGDEDGKKKKQKKKKDPNAPKRAMSGFI 449
SKK S KA + K+KS R+ + G K KKKKDPNAPKR SGF
Sbjct: 42 SKKCSERWKAMSGKEKSKFDEMAKADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSGFF 101
Query: 450 FFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
F R IK +NPGI+ DV + LGE W +S E++PY +KA K++Y+ +++ YK
Sbjct: 102 LFCSEFRPKIKSTNPGISVGDVAKKLGEMWNNLSDSEKQPYITKAAKLKEKYEKDVADYK 161
Query: 510 N 510
+
Sbjct: 162 S 162
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE KK NP + F + + ERWK MS +E+ ++ A+ADK RY
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKAMSGKEKSKFDEMAKADKVRYD 72
Query: 503 DEISGY 508
E+ Y
Sbjct: 73 REMKDY 78
>gi|40643040|emb|CAD91447.1| putative HMG-like protein [Crassostrea gigas]
Length = 135
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 430 KKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREP 489
K++K+ KDPNAPKRA+S F FF ER +++ ++P + +V + LG+RW+K V R
Sbjct: 36 KRKKRAKDPNAPKRALSAFFFFCGDERPDVRAAHPEWSVAEVAKELGKRWEK--VTNRSK 93
Query: 490 YESKARADKKRYKDEISGYK 509
+E++A ADK RY E+ Y+
Sbjct: 94 FEARAEADKARYAKEMEAYR 113
>gi|221053558|ref|XP_002258153.1| high mobility group protein (HMG protein) [Plasmodium knowlesi
strain H]
gi|193807986|emb|CAQ38690.1| high mobility group protein (HMG protein),putative [Plasmodium
knowlesi strain H]
Length = 99
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Query: 428 KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVE 485
+K+ ++KKKDP APKRA+S ++F+ + +R + K P +A VG+++GE W K+S
Sbjct: 11 RKQNKRKKKDPLAPKRALSAYMFYVKDKRLELIKEKPELARNVAQVGKLVGEAWGKLSAA 70
Query: 486 EREPYESKARADKKRYKDEISGYKNPK 512
++ PYE KA+ DK RY EI Y+ K
Sbjct: 71 QKTPYEKKAQLDKVRYSKEIEEYRKTK 97
>gi|148694627|gb|EDL26574.1| mCG10155, isoform CRA_b [Mus musculus]
Length = 206
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF F R IK +NPGI+ DV + LGE W +S E++PY +KA
Sbjct: 95 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDNEKQPYVTKAAK 154
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 155 LKEKYEKDVADYKS 168
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE KK NP + F + + ERWK MS +E+ ++ A+ADK RY
Sbjct: 19 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAKADKVRYD 78
Query: 503 DEISGY 508
E+ Y
Sbjct: 79 REMKDY 84
>gi|408397883|gb|EKJ77020.1| hypothetical protein FPSE_02664 [Fusarium pseudograminearum CS3096]
Length = 537
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 65/112 (58%), Gaps = 2/112 (1%)
Query: 398 KPAKKESKKESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERE 457
+P +E K ES + S ++ +K ++ K D NAP+R S ++ FS RE
Sbjct: 74 RPTSEEVKSESVQPEPSRTETPPEGHGVAKRKYRRHPKPDENAPERPPSAYVLFSNKMRE 133
Query: 458 NIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
+++ N + FT++ +++GE W+ ++ E+E YES+A ADK++Y ++ YK
Sbjct: 134 DLRSQN--LTFTEIAKLVGENWQNLNASEKEAYESQANADKEKYHRDLVEYK 183
>gi|290560936|ref|NP_001166812.1| high mobility group box 3 [Rattus norvegicus]
gi|392354295|ref|XP_003751731.1| PREDICTED: high mobility group protein B3-like isoform 2 [Rattus
norvegicus]
gi|149027076|gb|EDL82825.1| rCG56793 [Rattus norvegicus]
gi|165971283|gb|AAI58740.1| Hmgb3 protein [Rattus norvegicus]
Length = 200
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF F R IK +NPGI+ DV + LGE W +S E++PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYMTKAAK 148
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 149 LKEKYEKDVADYKS 162
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE KK NP + F + + ERWK MS +E+ ++ A+ADK RY
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAKADKVRYD 72
Query: 503 DEISGY 508
E+ Y
Sbjct: 73 REMKDY 78
>gi|71027705|ref|XP_763496.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350449|gb|EAN31213.1| high mobility group protein, putative [Theileria parva]
Length = 94
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
Query: 429 KKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEE 486
KK ++ KKDPNAPKRA+S ++FF++ +R + + NP +A VG+++G W + E
Sbjct: 11 KKSKRAKKDPNAPKRALSSYMFFAKEKRAELVRENPDLARDVAAVGKLVGAAWNSLDESE 70
Query: 487 REPYESKARADKKRYKDEISGY 508
+ PYE A AD+ RY+ E + Y
Sbjct: 71 KAPYEKLAEADRARYEKEKAAY 92
>gi|148682307|gb|EDL14254.1| mCG114640 [Mus musculus]
Length = 200
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF F R IK +NPGI+ DV + LGE W +S E++PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDNEKQPYVTKAAK 148
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 149 LKEKYEKDVADYKS 162
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE KK NP + F + + ERWK MS +E+ ++ A+ADK RY
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAKADKVRYD 72
Query: 503 DEISGY 508
E+ Y
Sbjct: 73 REMKDY 78
>gi|85000895|ref|XP_955166.1| high-mobility-group (HMG) protein [Theileria annulata strain
Ankara]
gi|65303312|emb|CAI75690.1| high-mobility-group (HMG) protein, putative [Theileria annulata]
Length = 94
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
Query: 429 KKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEE 486
KK ++ KKDPNAPKRA+S ++FF++ +R + + NP +A VG+++G W + E
Sbjct: 11 KKSKRAKKDPNAPKRALSSYMFFAKEKRAELVRDNPDLARDVAAVGKLVGAAWNSLDESE 70
Query: 487 REPYESKARADKKRYKDEISGY 508
+ PYE A AD+ RY+ E + Y
Sbjct: 71 KAPYEKLAEADRARYEKEKAAY 92
>gi|6680231|ref|NP_032279.1| high mobility group protein B3 [Mus musculus]
gi|20138160|sp|O54879.3|HMGB3_MOUSE RecName: Full=High mobility group protein B3; AltName: Full=High
mobility group protein 2a; Short=HMG-2a; AltName:
Full=High mobility group protein 4; Short=HMG-4
gi|2738989|gb|AAC16925.1| high mobility group protein homolog HMG4 [Mus musculus]
gi|15030059|gb|AAH11276.1| Hmgb3 protein [Mus musculus]
gi|26327985|dbj|BAC27733.1| unnamed protein product [Mus musculus]
gi|54035419|gb|AAH83352.1| High mobility group box 3 [Mus musculus]
gi|74146994|dbj|BAE27437.1| unnamed protein product [Mus musculus]
gi|74186760|dbj|BAE34835.1| unnamed protein product [Mus musculus]
gi|74192972|dbj|BAE34988.1| unnamed protein product [Mus musculus]
gi|74194280|dbj|BAE24671.1| unnamed protein product [Mus musculus]
gi|148694626|gb|EDL26573.1| mCG10155, isoform CRA_a [Mus musculus]
gi|148694628|gb|EDL26575.1| mCG10155, isoform CRA_a [Mus musculus]
gi|187957408|gb|AAI58038.1| High mobility group box 3 [Mus musculus]
Length = 200
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF F R IK +NPGI+ DV + LGE W +S E++PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDNEKQPYVTKAAK 148
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 149 LKEKYEKDVADYKS 162
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE KK NP + F + + ERWK MS +E+ ++ A+ADK RY
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAKADKVRYD 72
Query: 503 DEISGY 508
E+ Y
Sbjct: 73 REMKDY 78
>gi|260806967|ref|XP_002598355.1| hypothetical protein BRAFLDRAFT_57556 [Branchiostoma floridae]
gi|229283627|gb|EEN54367.1| hypothetical protein BRAFLDRAFT_57556 [Branchiostoma floridae]
Length = 223
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 423 GDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKM 482
G E G++K+ KKKDPNAPKRAMS F + R ++ ++P ++ ++LG +WK++
Sbjct: 83 GAEGGRRKR--KKKDPNAPKRAMSAFFMYCADARPKVRAAHPDFQVGEIAKILGRQWKEI 140
Query: 483 SVEEREPYESKARADKKRYKDEISGYKN 510
S ++ YE KA+ +K RY+ E++ YK
Sbjct: 141 SDSDKAKYEKKAQTEKARYQKELAEYKR 168
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 436 KDPNAPKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESK 493
KD N PK MS + F Q R+ +K P + FT+ + ERWK M+ E++ ++
Sbjct: 4 KDKNKPKGKMSAYACFVQECRKEHEKKYPDKQVVFTEFSKKCAERWKTMNDGEKKRFQDL 63
Query: 494 ARADKKRYKDEISGYKNPK 512
A DK+RY+ E++ Y PK
Sbjct: 64 AETDKRRYEREMAKYVPPK 82
>gi|426258242|ref|XP_004022724.1| PREDICTED: high mobility group protein B3 [Ovis aries]
Length = 248
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF F R IK +NPGI+ DV + LGE W +S E++PY +KA
Sbjct: 160 DPNAPKRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAK 219
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 220 LKEKYEKDVADYKS 233
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE KK NP + F + + ERWK MS +E+ ++ A+ADK RY
Sbjct: 84 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 143
Query: 503 DEISGY 508
E+ Y
Sbjct: 144 REMKDY 149
>gi|81673590|gb|AAI09794.1| High-mobility group box 3 [Bos taurus]
gi|296471156|tpg|DAA13271.1| TPA: high mobility group protein B3 isoform 1 [Bos taurus]
Length = 236
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF F R IK +NPGI+ DV + LGE W +S E++PY +KA
Sbjct: 125 DPNAPKRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAK 184
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 185 LKEKYEKDVADYKS 198
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE KK NP + F + + ERWK MS +E+ ++ A+ADK RY
Sbjct: 49 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 108
Query: 503 DEISGY 508
E+ Y
Sbjct: 109 REMKDY 114
>gi|52345682|ref|NP_001004888.1| high mobility group box 3 [Xenopus (Silurana) tropicalis]
gi|49522962|gb|AAH75290.1| MGC88931 protein [Xenopus (Silurana) tropicalis]
gi|89267024|emb|CAJ81774.1| high-mobility group box 3 [Xenopus (Silurana) tropicalis]
Length = 202
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 50/83 (60%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF F R IK +NPGI+ DV + LGE W ++ E++PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDGEKQPYNNKAAK 148
Query: 497 DKKRYKDEISGYKNPKPMDIDSG 519
K++Y+ +++ YK+ D G
Sbjct: 149 LKEKYEKDVADYKSKGKFDCAKG 171
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + +F Q RE KK NP I F + + ERWK MS +E+ ++ A+ADK RY
Sbjct: 13 MSAYAYFVQTCREEHKKKNPEIPVNFAEFSKKCSERWKTMSAKEKSKFDDLAKADKVRYD 72
Query: 503 DEISGY 508
E+ +
Sbjct: 73 REMKDF 78
>gi|547652|sp|P36194.2|HMGB1_CHICK RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|391636|dbj|BAA03260.1| HMG-1 [Gallus gallus]
Length = 201
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF F R IK +NPGI+ DV + LGE W +S E++PY +KA
Sbjct: 88 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDGEKQPYNNKAAK 147
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 148 LKEKYEKDVADYKS 161
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE KK NP + F + + ERWK MS +E+ ++ A+ADK RY
Sbjct: 13 MSAYAFFVQTCREEHKK-NPEVPVNFAEFSKKCSERWKTMSSKEKAKFDEMAKADKVRYD 71
Query: 503 DEISGY 508
E+ Y
Sbjct: 72 REMKDY 77
>gi|185135647|ref|NP_001118186.1| high mobility group-T protein [Oncorhynchus mykiss]
gi|123382|sp|P07746.2|HMGT_ONCMY RecName: Full=High mobility group-T protein; Short=HMG-T; AltName:
Full=HMG-T1; Short=HMG-1
gi|64328|emb|CAA26500.1| unnamed protein product [Oncorhynchus mykiss]
Length = 204
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 51/80 (63%)
Query: 431 KQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPY 490
K+K+ KDPNAPKR S F F R +K PG++ DV + LGE+W ++ E++ PY
Sbjct: 84 KKKRFKDPNAPKRPSSAFFIFCADFRPQVKGETPGLSIGDVAKKLGEKWNNLTAEDKVPY 143
Query: 491 ESKARADKKRYKDEISGYKN 510
E KA K++Y+ +I+ Y+N
Sbjct: 144 EKKASRLKEKYEKDITAYRN 163
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 436 KDPNAPKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESK 493
KDP P+ MS + +F Q RE KK +P + F++ + ERWK MS +E+ +E
Sbjct: 3 KDPRKPRGKMSSYAYFVQTRREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDL 62
Query: 494 ARADKKRYKDEISGYKNPK 512
A+ DK RY+ E+ Y PK
Sbjct: 63 AKLDKVRYEREMRSYIPPK 81
>gi|221221482|gb|ACM09402.1| High mobility group-T protein [Salmo salar]
Length = 203
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 51/80 (63%)
Query: 431 KQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPY 490
K+K+ KDPNAPKR S F F R +K PG++ DV + LGE+W ++ E++ PY
Sbjct: 84 KKKRFKDPNAPKRPSSAFFIFCADFRPQVKGETPGLSIGDVAKKLGEKWNNLTAEDKVPY 143
Query: 491 ESKARADKKRYKDEISGYKN 510
E KA K++Y+ +I+ Y+N
Sbjct: 144 EKKAARLKEKYEKDITAYRN 163
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 436 KDPNAPKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESK 493
KDP P+ MS + +F Q RE KK +P + F++ + ERW+ MS +E+ +E
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWRTMSAKEKGKFEDL 62
Query: 494 ARADKKRYKDEISGYKNPK 512
A+ DK RY+ E+ Y PK
Sbjct: 63 AKLDKMRYEREMRSYIPPK 81
>gi|440910877|gb|ELR60625.1| High mobility group protein B3 [Bos grunniens mutus]
Length = 236
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF F R IK +NPGI+ DV + LGE W +S E++PY +KA
Sbjct: 125 DPNAPKRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAK 184
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 185 LKEKYEKDVADYKS 198
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE KK NP + F + + ERWK MS +E+ ++ A+ADK RY
Sbjct: 49 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 108
Query: 503 DEISGY 508
E+ Y
Sbjct: 109 REMKDY 114
>gi|219116576|ref|XP_002179083.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409850|gb|EEC49781.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 75
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 51/73 (69%)
Query: 436 KDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKAR 495
KDPNAPK+AM+ F +F R IK+ NP ++F ++G+ GE ++ +S ++E YE A+
Sbjct: 1 KDPNAPKKAMTSFFYFLNEMRPKIKQENPDMSFGELGKKAGELFRALSTNQKEKYEKMAK 60
Query: 496 ADKKRYKDEISGY 508
+DK R+K+E+S Y
Sbjct: 61 SDKLRFKEEMSKY 73
>gi|29825377|gb|AAO92280.1| putative HMG-like protein [Dermacentor variabilis]
Length = 208
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 53/86 (61%)
Query: 428 KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEER 487
K KK+K+ KDPNAPKR +S F +F ER N+++ +P + +V + LG RW ++ + +
Sbjct: 83 KSKKRKRAKDPNAPKRPLSAFFWFCNDERPNVRQESPDASVGEVAKELGRRWNEVGDDVK 142
Query: 488 EPYESKARADKKRYKDEISGYKNPKP 513
YE A DK RY+ E+ YK KP
Sbjct: 143 SKYEGLAAKDKARYEKELKAYKGKKP 168
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 441 PKRAMSGFIFFSQMERENIKKSNPG--IAFTDVGRVLGERWKKMSVEEREPYESKARADK 498
P+ MS + FF Q RE KK +P + F + + ERWK MS E++ + A DK
Sbjct: 7 PRGRMSAYAFFVQTCREEHKKKHPNENVVFAEFSKKCAERWKTMSESEKKRFHQMADKDK 66
Query: 499 KRYKDEISGYKNPK 512
KR+ E++ YK PK
Sbjct: 67 KRFDTEMADYKPPK 80
>gi|449269345|gb|EMC80131.1| High mobility group protein B3 [Columba livia]
Length = 202
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF F R IK +NPGI+ DV + LGE W +S E++PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDGEKQPYNNKAAK 148
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 149 LKEKYEKDVADYKS 162
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE KK NP I F + + ERWK MS +E+ ++ A+ADK RY
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEIPVNFAEFSKKCSERWKTMSSKEKAKFDEMAKADKVRYD 72
Query: 503 DEISGY 508
E+ Y
Sbjct: 73 REMKDY 78
>gi|193664382|ref|XP_001944154.1| PREDICTED: hypothetical protein LOC100167132 [Acyrthosiphon pisum]
Length = 410
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 51/81 (62%)
Query: 430 KKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREP 489
KK+K+ KDPNAPKR++S F +F ER +K NP DV + LG++W + ++
Sbjct: 276 KKRKQIKDPNAPKRSLSAFFWFCNDERGKVKAVNPEYGVGDVAKELGKKWSDADITVKQK 335
Query: 490 YESKARADKKRYKDEISGYKN 510
YE+ A DK RY+ E++ YKN
Sbjct: 336 YEAMAEKDKARYEREMTEYKN 356
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 441 PKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESKARADK 498
P+ M+ + FF Q RE KK +P + F + + ERWK M+ +E++ + A DK
Sbjct: 196 PRGRMTAYAFFVQTCREEHKKKHPDENVIFAEFSKKCAERWKTMNEKEKKRFHEMADKDK 255
Query: 499 KRYKDEISGYKNPK 512
RY E+ Y PK
Sbjct: 256 LRYDTEMQSYIPPK 269
>gi|291410190|ref|XP_002721383.1| PREDICTED: high-mobility group box 3 [Oryctolagus cuniculus]
Length = 215
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF F R IK +NPGI+ DV + LGE W +S E++PY +KA
Sbjct: 104 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYITKAAK 163
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 164 LKEKYEKDVADYKS 177
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE KK NP + F + + ERWK MS +E+ ++ A+ADK RY
Sbjct: 28 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 87
Query: 503 DEISGY 508
E+ Y
Sbjct: 88 REMKDY 93
>gi|224098124|ref|XP_002198052.1| PREDICTED: high mobility group protein B3 isoform 1 [Taeniopygia
guttata]
gi|326924638|ref|XP_003208532.1| PREDICTED: high mobility group protein B3-like [Meleagris
gallopavo]
gi|449498655|ref|XP_004177286.1| PREDICTED: high mobility group protein B3 isoform 2 [Taeniopygia
guttata]
Length = 202
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF F R IK +NPGI+ DV + LGE W +S E++PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDGEKQPYNNKAAK 148
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 149 LKEKYEKDVADYKS 162
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE KK NP + F + + ERWK MS +E+ ++ A+ADK RY
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKAKFDEMAKADKVRYD 72
Query: 503 DEISGY 508
E+ Y
Sbjct: 73 REMKDY 78
>gi|156057705|ref|XP_001594776.1| hypothetical protein SS1G_04584 [Sclerotinia sclerotiorum 1980]
gi|154702369|gb|EDO02108.1| hypothetical protein SS1G_04584 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 554
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 428 KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEER 487
+K ++ K D NAP+R S ++ FS RE++K N ++FT++ +++GE W+ +S E+
Sbjct: 104 RKYRRHPKTDENAPERPPSAYVIFSNKMREDLKGRN--LSFTEIAKLVGENWQNLSPAEK 161
Query: 488 EPYESKARADKKRYKDEISGYK 509
EPYE A K+RY +E++ YK
Sbjct: 162 EPYEQSAYKAKERYNNELAEYK 183
>gi|49258306|pdb|1J3C|A Chain A, Solution Structure Of The C-Terminal Domain Of The Hmgb2
Length = 79
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 48/76 (63%)
Query: 434 KKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESK 493
KKKDPNAPKR S F F R IK +PG++ D + LGE W + S ++++PYE K
Sbjct: 2 KKKDPNAPKRPPSAFFLFCSEYRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQK 61
Query: 494 ARADKKRYKDEISGYK 509
A K++Y+ +I+ Y+
Sbjct: 62 AAKLKEKYEKDIAAYR 77
>gi|393236124|gb|EJD43675.1| hypothetical protein AURDEDRAFT_114701 [Auricularia delicata
TFB-10046 SS5]
Length = 107
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 47/68 (69%)
Query: 440 APKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKK 499
APKRA+S ++FF Q R+ IK+ NP +F +VG++LG +WK+M E++EPY KA DK
Sbjct: 27 APKRALSAYMFFVQDWRDRIKEENPDASFGEVGKLLGAKWKEMDDEDKEPYNQKATKDKA 86
Query: 500 RYKDEISG 507
R E +G
Sbjct: 87 RAAKEKAG 94
>gi|361130747|gb|EHL02497.1| putative High mobility group protein 20A [Glarea lozoyensis 74030]
Length = 267
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 65/104 (62%), Gaps = 8/104 (7%)
Query: 412 KASTSKKKSRD----GDEDGKKKKQKK--KKDPNAPKRAMSGFIFFSQMERENIKKSNPG 465
K+STSK+ +D G G K+K ++ K D N P+R S ++ FS RE +K N
Sbjct: 110 KSSTSKQDGKDRSGTGGPQGSKRKYRRHPKADENCPERPPSAYVIFSNKMREELKGRN-- 167
Query: 466 IAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
++FT++ +++GE W+ ++ E+EPYE +A + K+RY E++ YK
Sbjct: 168 LSFTEIAKLVGENWQNLAPAEKEPYEQQAFSAKERYNGELAEYK 211
>gi|406602438|emb|CCH45979.1| hypothetical protein BN7_5566 [Wickerhamomyces ciferrii]
Length = 90
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 49/66 (74%)
Query: 444 AMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKD 503
++S ++FF+ R+ ++ NPGI+F VG++LGERWK + E ++PY +KA ADKKRY++
Sbjct: 18 SLSAYMFFANDNRDIVRSENPGISFGGVGKLLGERWKALDDEGKKPYNAKAEADKKRYEE 77
Query: 504 EISGYK 509
E + Y+
Sbjct: 78 EKANYQ 83
>gi|49258307|pdb|1J3D|A Chain A, Solution Structure Of The C-Terminal Domain Of The Hmgb2
Length = 78
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 47/75 (62%)
Query: 435 KKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKA 494
KKDPNAPKR S F F R IK +PG++ D + LGE W + S ++++PYE KA
Sbjct: 2 KKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKA 61
Query: 495 RADKKRYKDEISGYK 509
K++Y+ +I+ Y+
Sbjct: 62 AKLKEKYEKDIAAYR 76
>gi|322794517|gb|EFZ17570.1| hypothetical protein SINV_80020 [Solenopsis invicta]
Length = 322
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 8/140 (5%)
Query: 378 PTDDSGEEDSDASESG--GEKEK-----PAKKESKKESSSVKASTSKKKSRDGDEDGKKK 430
PT+D E + ++ GE E+ P E K S + + G+ + K
Sbjct: 6 PTNDVPESNGAMEQAAYNGETEEHTTKSPVSIEEKAPDSVCDNGVKRSATVTGNTPNRTK 65
Query: 431 KQKKK-KDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREP 489
K+KK +D AP++ +SG+ F RE ++ NP + FT++ ++L W K+ +++++
Sbjct: 66 KRKKAPRDATAPRQPLSGYFLFLNDRREKVRNQNPSLTFTEITKLLAAEWSKLPIDQKQH 125
Query: 490 YESKARADKKRYKDEISGYK 509
Y A DK+RY E S YK
Sbjct: 126 YLDAAEQDKERYNREFSDYK 145
>gi|348551110|ref|XP_003461373.1| PREDICTED: high mobility group protein B3-like [Cavia porcellus]
Length = 202
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF F R IK +NPGI+ DV + LGE W +S E++PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYITKAAK 148
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 149 LKEKYEKDVADYKS 162
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE KK NP + F + + ERWK MS +E+ ++ A+ADK RY
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 503 DEISGY 508
E+ Y
Sbjct: 73 REMKDY 78
>gi|354495940|ref|XP_003510086.1| PREDICTED: high mobility group protein B3-like [Cricetulus griseus]
gi|344249016|gb|EGW05120.1| High mobility group protein B3 [Cricetulus griseus]
Length = 200
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF F R IK +NPGI+ DV + LGE W +S E++PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYITKAAK 148
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 149 LKEKYEKDVADYKS 162
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE KK NP + F + + ERWK MS +E+ ++ A+ADK RY
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 503 DEISGY 508
E+ Y
Sbjct: 73 REMKDY 78
>gi|56384901|gb|AAV85889.1| high mobility group 1 protein [Pelodiscus sinensis]
Length = 202
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF F R IK +NPGI+ DV + LGE W +S E++PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDGEKQPYNNKAAK 148
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 149 LKEKYEKDVADYKS 162
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE KK NP + F + + ERWK MS +E+ ++ A+ADK RY
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 503 DEISGY 508
E+ Y
Sbjct: 73 REMKDY 78
>gi|378725531|gb|EHY51990.1| hypothetical protein HMPREF1120_00213 [Exophiala dermatitidis
NIH/UT8656]
Length = 555
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
Query: 396 KEKPAKKESKKESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQME 455
+E P ES++ ++ + E +K ++ K D NAP+R S ++ FS
Sbjct: 73 QEAPVDSVRALESNTTPSAGPDRNPGPPAETKRKYRRHPKPDENAPERPPSAYVIFSNKV 132
Query: 456 RENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
RE +K N ++FT + +++G+RW+K+ +EP+E++A A K+RY ++S Y+
Sbjct: 133 REEVKDQN--LSFTQIAKLVGDRWQKLDPAGKEPFETQANAAKERYNIQLSTYR 184
>gi|387914724|gb|AFK10971.1| high mobility group box 1 [Callorhinchus milii]
Length = 226
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF FS R I++ PG++ D+ + LGE+W M EE+ PYE +A
Sbjct: 107 DPNAPKRPPSGFFIFSAHLRPKIREECPGLSIGDIAKKLGEKWNAMGSEEKLPYEQQADK 166
Query: 497 DKKRYKDEISGYK 509
K++YK +++ Y+
Sbjct: 167 LKEKYKKDVAAYR 179
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 431 KQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPG--IAFTDVGRVLGERWKKMSVEERE 488
K+K +DP P+ ++ F Q RE KK +P ++FT+ + ERWK MS +E+
Sbjct: 14 KRKMARDPKKPRGRLTSHALFVQTCREEHKKKHPEKVVSFTEFSKKCSERWKTMSAKEKS 73
Query: 489 PYESKARADKKRYKDEISGYKNP 511
+E ++ DKKRY+ E+ Y P
Sbjct: 74 KFEELSKEDKKRYESEMKDYVPP 96
>gi|442755991|gb|JAA70155.1| Putative dorsal switch protein 1 [Ixodes ricinus]
Length = 207
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 52/85 (61%)
Query: 428 KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEER 487
K KK+K+ KDPNAPKR +S F +F ER N+++ +P + +V + LG RW + + +
Sbjct: 83 KSKKRKRTKDPNAPKRPLSAFFWFCNDERPNVRQESPDASVGEVAKELGRRWNDVGDDTK 142
Query: 488 EPYESKARADKKRYKDEISGYKNPK 512
YE A DK RY+ E+ YKN K
Sbjct: 143 SKYEGLAAKDKARYEKELKAYKNKK 167
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 441 PKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESKARADK 498
P+ MS + FF Q RE KK +P + F + + ERWK MS E++ + A DK
Sbjct: 7 PRGRMSAYAFFVQTCREEHKKKHPTENVVFAEFSKKCAERWKTMSDGEKKRFHQMADKDK 66
Query: 499 KRYKDEISGYKNPK 512
KR+ E++ YK PK
Sbjct: 67 KRFDSEMADYKPPK 80
>gi|392876654|gb|AFM87159.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF FS R I++ PG++ D+ + LGE+W M EE+ PYE +A
Sbjct: 107 DPNAPKRPPSGFFIFSAHLRPKIREECPGLSIGDIAKKLGEKWNAMGSEEKLPYEQQADK 166
Query: 497 DKKRYKDEISGYK 509
K++YK +++ Y+
Sbjct: 167 LKEKYKKDVAAYR 179
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 431 KQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPG--IAFTDVGRVLGERWKKMSVEERE 488
K+K +DP P+ ++ + F Q RE KK +P ++FT+ + E WK MS +E+
Sbjct: 14 KRKMARDPKKPRGRLTSYALFVQTCREEHKKKHPEKVVSFTEFSKKCSEGWKTMSAKEKS 73
Query: 489 PYESKARADKKRYKDEISGYKNP 511
+E ++ DKKRY+ E+ Y P
Sbjct: 74 KFEELSKEDKKRYESEMKDYVPP 96
>gi|355694844|gb|AER99804.1| high-mobility group box 3 [Mustela putorius furo]
Length = 197
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF F R IK +NPGI+ DV + LGE W +S E++PY +KA
Sbjct: 91 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDGEKQPYNNKAAK 150
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 151 LKEKYEKDVADYKS 164
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE KK NP + F + + ERWK MS +E+ ++ A+ADK RY
Sbjct: 15 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 74
Query: 503 DEISGY 508
E+ Y
Sbjct: 75 REMKDY 80
>gi|17537205|ref|NP_496970.1| Protein HMG-1.1 [Caenorhabditis elegans]
gi|3702826|gb|AAC78598.1| high mobility group protein 1.1 [Caenorhabditis elegans]
gi|15718335|emb|CAB54448.2| Protein HMG-1.1 [Caenorhabditis elegans]
Length = 95
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 51/80 (63%), Gaps = 4/80 (5%)
Query: 430 KKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREP 489
KK K KDPNAPKRAMS F F+ Q RE IKK PG+ DV + G W K++ + R
Sbjct: 17 KKGGKAKDPNAPKRAMSAFFFWMQENRERIKK--PGMGVADVAKAAGVEWGKLTDKSR-- 72
Query: 490 YESKARADKKRYKDEISGYK 509
+E KA DKKRY+ +I+ YK
Sbjct: 73 WEKKAADDKKRYEVDIANYK 92
>gi|392879586|gb|AFM88625.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF FS R I++ PG++ D+ + LGE+W M EE+ PYE +A
Sbjct: 107 DPNAPKRPPSGFFIFSAHLRPKIREECPGLSIGDIAKKLGEKWNAMGSEEKLPYEQQADK 166
Query: 497 DKKRYKDEISGYK 509
K++YK +++ Y+
Sbjct: 167 LKEKYKKDVAAYR 179
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 431 KQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPG--IAFTDVGRVLGERWKKMSVEERE 488
K+K +DP P+ ++ + F Q RE KK +P ++FT+ + ERWK MS +E+
Sbjct: 14 KRKMARDPKKPRGRLTSYALFVQTCREEHKKKHPEKVVSFTEFSKKCSERWKTMSAKEKS 73
Query: 489 PYESKARADKKRYKDEISGYKNP 511
+E ++ DKKRY+ E+ Y P
Sbjct: 74 KFEELSKEDKKRYESEMKDYVPP 96
>gi|338815383|gb|AEJ08754.1| HMGB-like protein [Crassostrea ariakensis]
Length = 202
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 430 KKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREP 489
K++K+ KDP+APKRA+S F FF ER +++ ++P + +V + LG+RW+K V R
Sbjct: 87 KRKKRAKDPSAPKRALSAFFFFCADERPDVRAAHPEWSVAEVAKELGKRWEK--VTNRSK 144
Query: 490 YESKARADKKRYKDEISGYK 509
+E++A ADK RY E+ Y+
Sbjct: 145 FEARAEADKARYAKEMEAYR 164
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 441 PKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESKARADK 498
P+ MS + FF Q RE KK P + F + + ++WK+MS +E+ +E A DK
Sbjct: 8 PRGCMSSYAFFVQTCREEHKKKCPDENVVFAEFTKKCAQKWKEMSAKEKRRFEEMAERDK 67
Query: 499 KRYKDEISGYKNP 511
RY+ E++ Y P
Sbjct: 68 SRYEKEMANYDPP 80
>gi|392884154|gb|AFM90909.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF FS R I++ PG++ D+ + LGE+W M EE+ PYE +A
Sbjct: 107 DPNAPKRPPSGFFIFSAHLRPKIREECPGLSIGDIAKKLGEKWNAMGSEEKLPYEQQADK 166
Query: 497 DKKRYKDEISGYK 509
K++YK +++ Y+
Sbjct: 167 LKEKYKKDVAAYR 179
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 431 KQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPG--IAFTDVGRVLGERWKKMSVEERE 488
K+K +DP P+ ++ + F Q RE KK +P ++FT+ + ERW+ MS +E+
Sbjct: 14 KRKMARDPKKPRGRLTSYALFVQTCREEHKKKHPEKVVSFTEFSKKCSERWETMSAKEKS 73
Query: 489 PYESKARADKKRYKDEISGYKNP 511
+E ++ DKKRY+ E+ Y P
Sbjct: 74 KFEELSKEDKKRYESEMKDYVPP 96
>gi|392878936|gb|AFM88300.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF FS R I++ PG++ D+ + LGE+W M EE+ PYE +A
Sbjct: 107 DPNAPKRPPSGFFIFSAHLRPKIREECPGLSIGDIAKKLGEKWNAMGSEEKLPYEQQADK 166
Query: 497 DKKRYKDEISGYK 509
K++YK +++ Y+
Sbjct: 167 LKEKYKKDVAAYR 179
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 431 KQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPG--IAFTDVGRVLGERWKKMSVEERE 488
K+K +DP P+ ++ + F Q RE KK +P ++FT+ + ERWK MS +E+
Sbjct: 14 KRKMARDPKKPRGRLTSYALFVQTCREEHKKKHPEKVVSFTEFSKKCSERWKTMSAKEKS 73
Query: 489 PYESKARADKKRYKDEISGYKNP 511
+E ++ DKKRY+ E+ Y P
Sbjct: 74 KFEELSKEDKKRYESEMKDYVPP 96
>gi|359062996|ref|XP_003585778.1| PREDICTED: high mobility group protein B3-like, partial [Bos
taurus]
Length = 186
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF F R IK +NPGI+ DV + LGE W +S E++PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAK 148
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 149 LKEKYEKDVADYKS 162
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE KK NP + F + + ERWK MS +E+ ++ A+ADK RY
Sbjct: 13 MSAYSFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEIAKADKVRYD 72
Query: 503 DEISGY 508
E+ Y
Sbjct: 73 REMKDY 78
>gi|239791505|dbj|BAH72208.1| ACYPI007949 [Acyrthosiphon pisum]
Length = 172
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 51/81 (62%)
Query: 430 KKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREP 489
KK+K+ KDPNAPKR++S F +F ER +K NP DV + LG++W + ++
Sbjct: 38 KKRKQIKDPNAPKRSLSAFFWFCNDERGKVKAVNPEYGVGDVAKELGKKWSDADITVKQK 97
Query: 490 YESKARADKKRYKDEISGYKN 510
YE+ A DK RY+ E++ YKN
Sbjct: 98 YEAMAEKDKARYEREMTEYKN 118
>gi|392876858|gb|AFM87261.1| high mobility group protein [Callorhinchus milii]
gi|392878442|gb|AFM88053.1| high mobility group protein [Callorhinchus milii]
gi|392880194|gb|AFM88929.1| high mobility group protein [Callorhinchus milii]
gi|392881188|gb|AFM89426.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF FS R I++ PG++ D+ + LGE+W M EE+ PYE +A
Sbjct: 107 DPNAPKRPPSGFFIFSAHLRPKIREECPGLSIGDIAKKLGEKWNAMGSEEKLPYEQQADK 166
Query: 497 DKKRYKDEISGYK 509
K++YK +++ Y+
Sbjct: 167 LKEKYKKDVAAYR 179
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 431 KQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPG--IAFTDVGRVLGERWKKMSVEERE 488
K+K +DP P+ ++ + F Q RE KK +P ++FT+ + ERWK MS +E+
Sbjct: 14 KRKMARDPKKPRGRLTSYALFVQTCREEHKKKHPEKVVSFTEFSKKCSERWKTMSAKEKS 73
Query: 489 PYESKARADKKRYKDEISGYKNP 511
+E ++ DKKRY+ E+ Y P
Sbjct: 74 KFEELSKEDKKRYESEMKDYVPP 96
>gi|324514253|gb|ADY45807.1| FACT complex subunit SSRP1 [Ascaris suum]
Length = 91
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 433 KKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYES 492
KK KDPNAPKRAMS F F+ Q R+ +KK PG+ DV + G W K+S ++ +E
Sbjct: 12 KKAKDPNAPKRAMSAFFFWMQENRDRLKK--PGMGVADVAKAAGAEWAKLS--DKSKWEK 67
Query: 493 KARADKKRYKDEISGYK 509
KA DKKRY+ ++ YK
Sbjct: 68 KAEEDKKRYERDLVAYK 84
>gi|311277128|ref|XP_003135516.1| PREDICTED: high mobility group protein B3-like [Sus scrofa]
Length = 202
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF F R IK +NPGI+ DV + LGE W +S E++PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAK 148
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 149 LKEKYEKDVADYKS 162
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE KK NP + F + + ERWK MS +E+ ++ A+ADK RY
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 503 DEISGY 508
E+ Y
Sbjct: 73 REMKDY 78
>gi|241122588|ref|XP_002403591.1| DNA-binding protein, putative [Ixodes scapularis]
gi|215493481|gb|EEC03122.1| DNA-binding protein, putative [Ixodes scapularis]
Length = 207
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 52/85 (61%)
Query: 428 KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEER 487
K KK+K+ KDPNAPKR +S F +F ER N+++ +P + +V + LG RW + + +
Sbjct: 83 KSKKRKRTKDPNAPKRPLSAFFWFCNDERPNVRQESPDASVGEVAKELGRRWNDVGDDTK 142
Query: 488 EPYESKARADKKRYKDEISGYKNPK 512
YE A DK RY+ E+ YKN K
Sbjct: 143 SKYEGLAAKDKARYEKELKAYKNKK 167
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 441 PKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESKARADK 498
P+ MS + FF Q RE KK +P + F + + ERWK MS E++ + A DK
Sbjct: 7 PRGRMSAYAFFVQTCREEHKKKHPSENVVFAEFSKKCAERWKTMSEGEKKRFHQMADKDK 66
Query: 499 KRYKDEISGYKNPK 512
KR+ E++ YK PK
Sbjct: 67 KRFDSEMADYKPPK 80
>gi|308493323|ref|XP_003108851.1| CRE-HMG-1.1 protein [Caenorhabditis remanei]
gi|308247408|gb|EFO91360.1| CRE-HMG-1.1 protein [Caenorhabditis remanei]
Length = 95
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 47/73 (64%), Gaps = 4/73 (5%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKRAMS F F+ Q RE IKK PG+ DV + G W K++ + R +E KA
Sbjct: 24 DPNAPKRAMSAFFFWMQENRERIKK--PGMGVADVAKAAGVEWGKLTDKSR--WEKKAAD 79
Query: 497 DKKRYKDEISGYK 509
DKKRY+ EI+ YK
Sbjct: 80 DKKRYESEIATYK 92
>gi|334261581|gb|AEG74031.1| HMGbox protein [Pellia endiviifolia (species B)]
gi|334261589|gb|AEG74035.1| HMGbox protein [Pellia endiviifolia (species B)]
Length = 120
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 56/80 (70%)
Query: 430 KKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREP 489
K+ +K KD PKRA+ +++F + +R+ I++ NP ++F D+GRVLG +W K++ +E++
Sbjct: 38 KRIRKVKDKRRPKRALGPYMYFCKDQRKEIQEQNPTMSFGDIGRVLGSQWGKLNEKEKQK 97
Query: 490 YESKARADKKRYKDEISGYK 509
Y KA+ DK+RY E+ YK
Sbjct: 98 YIRKAQTDKRRYVKEMKRYK 117
>gi|350588033|ref|XP_003482539.1| PREDICTED: high mobility group protein B3-like [Sus scrofa]
gi|350588037|ref|XP_003482541.1| PREDICTED: high mobility group protein B3-like [Sus scrofa]
Length = 196
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF F R IK +NPGI+ DV + LGE W +S E++PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAK 148
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 149 LKEKYEKDVADYKS 162
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE KK NP + F + + ERWK S +E+ ++ A+ADK RY
Sbjct: 13 MSAYDFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKPTSGKEKSKFDEMAKADKVRYD 72
Query: 503 DEISGY 508
E+ Y
Sbjct: 73 REMKDY 78
>gi|164450473|ref|NP_001106728.1| high mobility group protein B3 isoform 2 [Bos taurus]
gi|146324910|sp|Q32L31.2|HMGB3_BOVIN RecName: Full=High mobility group protein B3
gi|296471157|tpg|DAA13272.1| TPA: high mobility group protein B3 isoform 2 [Bos taurus]
gi|399227521|gb|AFP36466.1| HMGB3 transcript variant 1/2 [Bos taurus]
gi|399227522|gb|AFP36467.1| HMGB3 transcript variant 3 [Bos taurus]
Length = 200
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF F R IK +NPGI+ DV + LGE W +S E++PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAK 148
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 149 LKEKYEKDVADYKS 162
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE KK NP + F + + ERWK MS +E+ ++ A+ADK RY
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 503 DEISGY 508
E+ Y
Sbjct: 73 REMKDY 78
>gi|27466905|gb|AAO12859.1| high mobility group protein [Branchiostoma belcheri tsingtauense]
Length = 164
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 56/84 (66%), Gaps = 2/84 (2%)
Query: 423 GDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKM 482
G E G++K+ KKKDPNAPKRAMS F + R ++ ++P D+ ++LG++WK++
Sbjct: 82 GAEGGRRKR--KKKDPNAPKRAMSAFFMYCADARPKVRAAHPDFQVGDIAKILGKQWKEI 139
Query: 483 SVEEREPYESKARADKKRYKDEIS 506
S ++ YE KA+ ++ RY+ E++
Sbjct: 140 SDSDKAKYEKKAQTERARYQKELA 163
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 436 KDPNAPKRAMSGFIFFSQ-MERENIKK-SNPGIAFTDVGRVLGERWKKMSVEEREPYESK 493
KD N PK MS + F Q RE+ KK N + FT+ + RWK M+ +E++ ++
Sbjct: 3 KDKNKPKGKMSAYACFVQECRREHEKKYPNKQVVFTEFSQKCASRWKTMNDDEKKRFQVL 62
Query: 494 ARADKKRYKDEISGYKNPK 512
A ADK+RY+ ++ Y PK
Sbjct: 63 AEADKRRYEQNMAKYVPPK 81
>gi|156552179|ref|XP_001605958.1| PREDICTED: high mobility group protein DSP1 [Nasonia vitripennis]
Length = 433
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 50/83 (60%)
Query: 427 GKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEE 486
G+ KK+K KDPNAPKR++S F +F ER +K NP D+ + LG++W E
Sbjct: 319 GRGKKRKHIKDPNAPKRSLSAFFWFCNDERGKVKMLNPEYGVGDIAKELGKKWSDAGPEL 378
Query: 487 REPYESKARADKKRYKDEISGYK 509
+ YE+ A DK RY+ E++ YK
Sbjct: 379 KGKYEAMAEKDKARYEREMTAYK 401
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 441 PKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESKARADK 498
P+ M+ + FF Q R+ KK +P I F + + RWK MS +E++ + A DK
Sbjct: 240 PRGRMTAYAFFVQTCRQEHKKKHPDENIVFQEFSKKCALRWKTMSDKEKKRFHEMAEKDK 299
Query: 499 KRYKDEISGYKNPK 512
KRY E+ Y PK
Sbjct: 300 KRYDTEMQSYIPPK 313
>gi|82658290|ref|NP_001032501.1| high mobility group protein B2 [Danio rerio]
gi|81294190|gb|AAI07992.1| Zgc:123215 [Danio rerio]
Length = 213
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 46/73 (63%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR S F F R +K NPGI+ D+ + LGE W K+S +E+ PYE KA
Sbjct: 91 DPNAPKRPPSAFFVFCSDHRPKVKGDNPGISIGDIAKKLGEMWSKLSPKEKSPYEQKAMK 150
Query: 497 DKKRYKDEISGYK 509
K++Y+ +++ Y+
Sbjct: 151 LKEKYEKDVAAYR 163
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 436 KDPNAPKRAMSGFIFFSQMERENIKKSNPG--IAFTDVGRVLGERWKKMSVEEREPYESK 493
KDPN P+ S + FF Q RE KK NPG + F++ + ERW+ MS +E+ +E
Sbjct: 3 KDPNKPRGKTSSYAFFVQTCREEHKKKNPGTSVNFSEFSKKCSERWRTMSSKEKGKFEEM 62
Query: 494 ARADKKRYKDEISGYKNP 511
A+ DK RY E+ Y P
Sbjct: 63 AKTDKVRYDREMKNYVPP 80
>gi|350402647|ref|XP_003486555.1| PREDICTED: high mobility group protein DSP1-like [Bombus impatiens]
Length = 456
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 51/87 (58%)
Query: 423 GDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKM 482
G+ G+ KK+K KD NAPKR++S F +F ER +K NP D+ + LG++W
Sbjct: 340 GESKGRGKKRKHIKDHNAPKRSLSAFFWFCNDERGKVKMLNPEFGVGDIAKELGKKWSDA 399
Query: 483 SVEEREPYESKARADKKRYKDEISGYK 509
E + YE+ A DK RY+ E++ YK
Sbjct: 400 DPETKSKYEAMAEKDKARYEREMTAYK 426
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 441 PKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESKARADK 498
P+ M+ + FF Q R+ KK +P I F + + RWK MS +E++ + A DK
Sbjct: 266 PRGRMTAYAFFVQTCRQEHKKKHPEEKIVFREFSKKCAMRWKTMSDKEKKRFHEMAEKDK 325
Query: 499 KRYKDEISGYKNPK 512
KRY E+ Y PK
Sbjct: 326 KRYDAEMQNYTPPK 339
>gi|428163656|gb|EKX32716.1| FACT complex subunit ssrp1 [Guillardia theta CCMP2712]
Length = 746
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 51/81 (62%)
Query: 433 KKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYES 492
++KKDPNAPKR S ++ F +RE+I K NP I FT+V + E WK +S +E++P+E
Sbjct: 544 RQKKDPNAPKRPKSAWLLFCDAKREDIVKENPDIKFTEVNGKISEIWKNLSSDEKKPFEE 603
Query: 493 KARADKKRYKDEISGYKNPKP 513
+A +YK++ + Y P
Sbjct: 604 EAAKLASKYKEDKAKYDKENP 624
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 78/132 (59%), Gaps = 6/132 (4%)
Query: 396 KEKPAKKESKKESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQME 455
KE AK + + SSS A K R G+++ + K +K KKDPNAPKR + ++ +SQ
Sbjct: 613 KEDKAKYDKENPSSSGGAG----KKRKGEDEKEGKAKKAKKDPNAPKRGQNAYMLWSQEA 668
Query: 456 RENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYKNPKPM- 514
RE ++K+NP + V + LGE+WK++ EE++ +E KAR DK+R+K E YK P
Sbjct: 669 REKMRKANPDLPMKAVMQQLGEKWKEIDAEEKKEWEEKAREDKERFKRETEEYKKKGPSL 728
Query: 515 -DIDSGNESDSA 525
+ + E DS
Sbjct: 729 EEFEKAGEEDSG 740
>gi|312190937|gb|ADQ43367.1| HMGBb [Litopenaeus vannamei]
Length = 206
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%)
Query: 430 KKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREP 489
+K++ +KDPNAPKRA+S F +F ER ++ +NP + DV + LG W E +
Sbjct: 90 RKRRNRKDPNAPKRALSAFFWFCNDERAKVRAANPDMGVGDVAKQLGAAWSNTPPEAKAK 149
Query: 490 YESKARADKKRYKDEISGYK 509
YE+ A +DK+RY+ E+ +K
Sbjct: 150 YEALAASDKERYEKEMKAFK 169
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 441 PKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESKARADK 498
P+ MS + FF Q RE KK +P + F++ R ERWK M+ +E++ + A DK
Sbjct: 11 PRGRMSAYAFFVQTCREEHKKKHPDENVVFSEFSRKCAERWKTMTDKEKDRFYDMADKDK 70
Query: 499 KRYKDEISGYKNPK 512
RY E+ GY+ P+
Sbjct: 71 ARYDTEMKGYRGPR 84
>gi|403305854|ref|XP_003943467.1| PREDICTED: high mobility group protein B3 [Saimiri boliviensis
boliviensis]
Length = 202
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF F R IK +NPGI+ DV + LGE W ++ E++PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAK 148
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 149 LKEKYEKDVADYKS 162
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE KK NP + F + + ERWK MS +E+ ++ A+ADK Y
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSEFDEMAKADKVCYD 72
Query: 503 DEISGY 508
E+ Y
Sbjct: 73 REMKDY 78
>gi|219111369|ref|XP_002177436.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411971|gb|EEC51899.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]
Length = 147
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 51/70 (72%)
Query: 432 QKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYE 491
++ KKDP+APKR MS F++FS R ++KK +P I T+V R+LGE W+ S E+R+P+
Sbjct: 78 KRAKKDPSAPKRPMSAFLYFSLGRRSDLKKKHPEIKNTEVSRLLGEMWRSASEEQRKPHV 137
Query: 492 SKARADKKRY 501
K +A++++Y
Sbjct: 138 DKEKAEREKY 147
>gi|401406436|ref|XP_003882667.1| Zgc:123215, related [Neospora caninum Liverpool]
gi|325117083|emb|CBZ52635.1| Zgc:123215, related [Neospora caninum Liverpool]
Length = 98
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 48/67 (71%), Gaps = 2/67 (2%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGI--AFTDVGRVLGERWKKMSVEEREPYESKA 494
DPNAP+RA+S F+FF++ +R I ++P + T VG+++GE W K++ EER+P+E KA
Sbjct: 21 DPNAPRRALSAFMFFAKEKRTEIVAAHPELKSQMTKVGKMVGEAWGKLTPEERKPFEEKA 80
Query: 495 RADKKRY 501
DK RY
Sbjct: 81 AQDKARY 87
>gi|332375054|gb|AEE62668.1| unknown [Dendroctonus ponderosae]
Length = 306
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 51/85 (60%)
Query: 425 EDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSV 484
E + KK+K+ KDPNAPKR++S F +FS ER +K NP D+ + LG RW
Sbjct: 194 EKQRGKKRKQIKDPNAPKRSLSAFFWFSNDERGKVKAQNPEYGVGDIAKELGRRWADADP 253
Query: 485 EEREPYESKARADKKRYKDEISGYK 509
E R +E+ A DK RY+ E++ YK
Sbjct: 254 EVRSKFEALADKDKIRYEKEMTAYK 278
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 435 KKDPNAPKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYES 492
KK + P+ M+ + FF Q RE KK +P + F + + ERWK M +E++ +
Sbjct: 113 KKGDSKPRGRMTAYAFFVQTCREEHKKKHPEENVVFAEFSKKCAERWKTMLDKEKKRFHE 172
Query: 493 KARADKKRYKDEISGYKNPK 512
A DKKRY E+ Y PK
Sbjct: 173 MAETDKKRYDTEMQSYTPPK 192
>gi|349802605|gb|AEQ16775.1| putative high mobility group box 3 [Pipa carvalhoi]
Length = 149
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 47/73 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF F R IK +NPGI+ DV + LGE W ++ E++PY +KA
Sbjct: 64 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNEGEKQPYNNKAAK 123
Query: 497 DKKRYKDEISGYK 509
K++Y+ +++ YK
Sbjct: 124 LKEKYEKDVADYK 136
Score = 38.9 bits (89), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 460 KKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGY 508
KK NP I F + + ERWK MS +E+ +E A+ADK RY E Y
Sbjct: 3 KKKNPEIPVNFAEFSKKCSERWKIMSAKEKSKFEDLAKADKVRYDREKKDY 53
>gi|66826605|ref|XP_646657.1| HMG1/2 box-containing protein [Dictyostelium discoideum AX4]
gi|74858297|sp|Q55C24.1|NHP6_DICDI RecName: Full=Non-histone chromosomal protein 6 homolog
gi|60474543|gb|EAL72480.1| HMG1/2 box-containing protein [Dictyostelium discoideum AX4]
Length = 141
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 48/72 (66%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
D NAP+R +S FIFFS+ R IK S+P +F ++G +LG+ W K+S E+++ YE A
Sbjct: 49 DENAPRRYLSPFIFFSKDHRSVIKNSHPNCSFGEIGSLLGQEWAKISAEDKKKYEKLAAE 108
Query: 497 DKKRYKDEISGY 508
DKKR++ E Y
Sbjct: 109 DKKRWELEKKNY 120
>gi|432953329|ref|XP_004085352.1| PREDICTED: high mobility group protein B2-like isoform 1 [Oryzias
latipes]
Length = 200
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 51/80 (63%)
Query: 430 KKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREP 489
K+ +K+KDPNAPKR S F F R ++K+ PG++ D + LGE W K+S E++P
Sbjct: 86 KRGRKRKDPNAPKRPPSAFFVFCSEYRPSVKQQYPGLSIGDCAKKLGEMWSKLSQSEKQP 145
Query: 490 YESKARADKKRYKDEISGYK 509
YE KA+ +++Y ++ Y+
Sbjct: 146 YEEKAQKLREKYDRDMVAYR 165
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 435 KKDPNAPKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYES 492
+KD N PK S + FF Q RE +K NP + F + + ERWK +S +++ +E
Sbjct: 3 RKDVNKPKGKTSAYAFFVQTCREEHRKKNPEQSVNFAEFSKKCSERWKALSPSDKKCFED 62
Query: 493 KARADKKRYKDEISGYKNPK 512
A+ADK RY E+ Y PK
Sbjct: 63 MAKADKVRYNREMCDYVPPK 82
>gi|426397135|ref|XP_004064781.1| PREDICTED: high mobility group protein B3-like [Gorilla gorilla
gorilla]
Length = 221
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 52/86 (60%)
Query: 434 KKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESK 493
KKKDPNA KR +SGF F R IK +NPGI+ D+ + LGE W S E++PY +K
Sbjct: 105 KKKDPNALKRPLSGFFLFCSEFRPKIKSTNPGISIGDMAKKLGEMWINYSDREKQPYITK 164
Query: 494 ARADKKRYKDEISGYKNPKPMDIDSG 519
A K++Y+ +++ YK+ D G
Sbjct: 165 AADLKEKYEKDVADYKSKGKFDSAKG 190
>gi|395847762|ref|XP_003796535.1| PREDICTED: high mobility group protein B3-like [Otolemur garnettii]
Length = 255
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 48/77 (62%)
Query: 434 KKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESK 493
KKKDPNAP R SGF F IK +NPGI+ DV + L E W +S E++PY +K
Sbjct: 109 KKKDPNAPTRPPSGFCLFCSEFHPKIKSTNPGISIGDVAKKLSEMWSNLSGSEKQPYITK 168
Query: 494 ARADKKRYKDEISGYKN 510
A +++Y+ +++ YK+
Sbjct: 169 AAQLREKYEKDVADYKS 185
>gi|380025638|ref|XP_003696576.1| PREDICTED: high mobility group protein DSP1-like [Apis florea]
Length = 420
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 51/87 (58%)
Query: 423 GDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKM 482
G+ G+ KK+K KD NAPKR++S F +F ER +K NP D+ + LG++W
Sbjct: 304 GESKGRGKKRKHIKDHNAPKRSLSAFFWFCNDERGKVKMLNPEFGVGDIAKELGKKWSDA 363
Query: 483 SVEEREPYESKARADKKRYKDEISGYK 509
E + YE+ A DK RY+ E++ YK
Sbjct: 364 DPETKSKYEAMAEKDKARYEREMTAYK 390
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 441 PKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESKARADK 498
P+ M+ + FF Q R+ KK +P I F + + RWK MS +E++ + A DK
Sbjct: 230 PRGRMTAYAFFVQTCRQEHKKKHPEEKIVFREFSKKCAMRWKTMSDKEKKRFHEMAEKDK 289
Query: 499 KRYKDEISGYKNPK 512
KRY E+ Y PK
Sbjct: 290 KRYDAEMQNYTPPK 303
>gi|2285963|emb|CAA71143.1| high mobility group protein 2a [Homo sapiens]
Length = 200
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF F R IK +NPGI+ DV + LGE W ++ E++PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAK 148
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 149 LKEKYEKDVADYKS 162
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 446 SGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYKD 503
S + FF Q RE KK NP + F + + ERWK +S +E+ ++ A+ADK RY
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTVSGKEKSKFDEMAKADKVRYDR 73
Query: 504 EISGY 508
E+ Y
Sbjct: 74 EMKDY 78
>gi|307192728|gb|EFN75836.1| High mobility group protein DSP1 [Harpegnathos saltator]
Length = 445
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 51/87 (58%)
Query: 423 GDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKM 482
G+ G+ KK+K KD NAPKR++S F +F ER +K NP D+ + LG++W
Sbjct: 328 GENKGRGKKRKHIKDHNAPKRSLSAFFWFCNDERGKVKMLNPEYGVGDIAKELGKKWSDA 387
Query: 483 SVEEREPYESKARADKKRYKDEISGYK 509
E + YE+ A DK RY+ E++ YK
Sbjct: 388 DPETKSKYEAMAEKDKARYEREMTAYK 414
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 441 PKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESKARADK 498
P+ M+ + FF Q R+ KK +P I F + + RWK MS +E++ + A DK
Sbjct: 254 PRGRMTAYAFFVQTCRQEHKKKHPEEKIVFREFSKKCAMRWKTMSDKEKKRFHEMAEKDK 313
Query: 499 KRYKDEISGYKNPK 512
KRY E+ Y PK
Sbjct: 314 KRYDAEMQNYTPPK 327
>gi|171696076|ref|XP_001912962.1| hypothetical protein [Podospora anserina S mat+]
gi|170948280|emb|CAP60444.1| unnamed protein product [Podospora anserina S mat+]
Length = 478
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 56/82 (68%), Gaps = 2/82 (2%)
Query: 428 KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEER 487
+K ++ K D NAP+R S ++ FS RE +K N ++FT++ +++GE W+ ++ E+
Sbjct: 106 RKYRRHPKPDENAPERPPSAYVLFSNKMREELKGRN--LSFTEIAKLVGENWQSLNASEK 163
Query: 488 EPYESKARADKKRYKDEISGYK 509
EPYES+A+A K++Y +++ YK
Sbjct: 164 EPYESQAQAIKEKYLSDLAEYK 185
>gi|320091041|gb|ADW08807.1| high mobility group box X [Lethenteron camtschaticum]
Length = 225
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 47/78 (60%)
Query: 432 QKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYE 491
Q+KKKDPNAPKR S F F R IK NPG+ + + LGE W + + E + PYE
Sbjct: 90 QRKKKDPNAPKRPPSAFFIFCADFRPQIKADNPGMVIGTIAKRLGEMWGRQTNENKAPYE 149
Query: 492 SKARADKKRYKDEISGYK 509
KA K++YK +++ Y+
Sbjct: 150 HKANILKEKYKKDVAAYQ 167
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPG--IAFTDVGRVLGERWKKMSVEEREPYESKA 494
DP+ P+ MS + +F Q RE KK +P +AFTD R ERWK +S +E+ +E A
Sbjct: 5 DPSKPRGRMSSYAYFVQTCREEHKKKHPNDSVAFTDFSRKCSERWKGLSPKEKLRFEDLA 64
Query: 495 RADKKRYKDEISGY 508
RADK RY E+ Y
Sbjct: 65 RADKTRYDTEMKDY 78
>gi|147898805|ref|NP_001087141.1| high mobility group protein 20A [Xenopus laevis]
gi|82181983|sp|Q6AZF8.1|HM20A_XENLA RecName: Full=High mobility group protein 20A; AltName: Full=HMG
box-containing protein 20A
gi|50603766|gb|AAH78062.1| Hmg20a-prov protein [Xenopus laevis]
Length = 345
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 54/92 (58%)
Query: 419 KSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGER 478
K+R G + +K+++ +D NAPK ++G++ F RE ++ P + F ++ R++G
Sbjct: 79 KARRGGWNKGRKRKRSPRDNNAPKAPLTGYVRFMNERREQLRTERPDVPFPEITRIVGSE 138
Query: 479 WKKMSVEEREPYESKARADKKRYKDEISGYKN 510
W K+ E++ Y +A DK+RY E+ Y+N
Sbjct: 139 WSKLPAHEKQHYLDEAEKDKERYTKELQKYQN 170
>gi|148229870|ref|NP_001080585.1| high mobility group box 3 [Xenopus laevis]
gi|27882654|gb|AAH44009.1| Hmgb3-prov protein [Xenopus laevis]
Length = 202
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 46/74 (62%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF F R IK +NPGI DV + LGE W +S E++PY +K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGITIGDVAKKLGEMWNNLSDSEKQPYNNKGAK 148
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 149 LKEKYEKDVADYKS 162
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + +F Q RE KK NP I F++ + ERW+ MS +E+ ++ A+ADK RY
Sbjct: 13 MSAYAYFVQTCREEHKKKNPEIPVNFSEFSKKCSERWRGMSGKEKSKFDDLAKADKVRYD 72
Query: 503 DEISGY 508
E+ +
Sbjct: 73 REMQDF 78
>gi|156083745|ref|XP_001609356.1| high mobility group protein-like protein NHP1 [Babesia bovis T2Bo]
gi|730136|sp|P40632.1|NHP1_BABBO RecName: Full=High mobility group protein homolog NHP1
gi|344189439|pdb|2LHJ|A Chain A, Nmr Structure Of The High Mobility Group Protein-Like
Protein Nhp1 From Babesia Bovis T2bo (Baboa.00841.A)
gi|155890|gb|AAA27799.1| non-histone protein [Babesia bovis]
gi|154796607|gb|EDO05788.1| high mobility group protein-like protein NHP1 [Babesia bovis]
Length = 97
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Query: 424 DEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKK 481
D G ++ +K KKDPNAPKRA+S ++FF++ +R I NP IA +G+++G W
Sbjct: 6 DRTGVRRPRKAKKDPNAPKRALSSYMFFAKEKRVEIIAENPEIAKDVAAIGKMIGAAWNA 65
Query: 482 MSVEEREPYESKARADKKRYKDEISGY 508
+S EE++PYE + D+ RY+ E + Y
Sbjct: 66 LSDEEKKPYERMSDEDRVRYEREKAEY 92
>gi|410219302|gb|JAA06870.1| high mobility group box 3 [Pan troglodytes]
Length = 199
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF F R IK +NPGI+ DV + LGE W ++ E++PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAK 148
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 149 LKEKYEKDVADYKS 162
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE KK NP + F + + ERWK MS +E+ ++ A+ADK RY
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 503 DEISGY 508
E+ Y
Sbjct: 73 REMKDY 78
>gi|296236643|ref|XP_002763412.1| PREDICTED: high mobility group protein B3-like [Callithrix jacchus]
Length = 203
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF F R IK +NPGI+ DV + LGE W ++ E++PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAK 148
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 149 LKEKYEKDVADYKS 162
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE KK NP + F + + ERWK MS +E+ ++ A+ADK RY
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 503 DEISGY 508
E+ Y
Sbjct: 73 REMKDY 78
>gi|167773205|gb|ABZ92037.1| high-mobility group box 3 [synthetic construct]
Length = 198
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF F R IK +NPGI+ DV + LGE W ++ E++PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAK 148
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 149 LKEKYEKDVADYKS 162
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE KK NP + F + + ERWK MS +E+ ++ A+ADK RY
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 503 DEISGY 508
E+ Y
Sbjct: 73 REMKDY 78
>gi|109132602|ref|XP_001091672.1| PREDICTED: high mobility group protein B3-like isoform 3 [Macaca
mulatta]
gi|109132606|ref|XP_001091441.1| PREDICTED: high mobility group protein B3-like isoform 1 [Macaca
mulatta]
gi|402911729|ref|XP_003918461.1| PREDICTED: high mobility group protein B3 isoform 1 [Papio anubis]
gi|402911731|ref|XP_003918462.1| PREDICTED: high mobility group protein B3 isoform 2 [Papio anubis]
Length = 201
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF F R IK +NPGI+ DV + LGE W ++ E++PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAK 148
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 149 LKEKYEKDVADYKS 162
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE KK NP + F + + ERWK MS +E+ ++ A+ADK RY
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 503 DEISGY 508
E+ Y
Sbjct: 73 REMKDY 78
>gi|71143137|ref|NP_005333.2| high mobility group protein B3 [Homo sapiens]
gi|426397735|ref|XP_004065062.1| PREDICTED: high mobility group protein B3 isoform 1 [Gorilla
gorilla gorilla]
gi|426397739|ref|XP_004065064.1| PREDICTED: high mobility group protein B3 isoform 3 [Gorilla
gorilla gorilla]
gi|85701353|sp|O15347.4|HMGB3_HUMAN RecName: Full=High mobility group protein B3; AltName: Full=High
mobility group protein 2a; Short=HMG-2a; AltName:
Full=High mobility group protein 4; Short=HMG-4
gi|47124341|gb|AAH70482.1| HMGB3 protein [Homo sapiens]
gi|117645316|emb|CAL38124.1| hypothetical protein [synthetic construct]
gi|117646384|emb|CAL38659.1| hypothetical protein [synthetic construct]
gi|119619803|gb|EAW99397.1| high-mobility group box 3, isoform CRA_a [Homo sapiens]
gi|410351655|gb|JAA42431.1| high mobility group box 3 [Pan troglodytes]
gi|410351657|gb|JAA42432.1| high mobility group box 3 [Pan troglodytes]
Length = 200
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF F R IK +NPGI+ DV + LGE W ++ E++PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAK 148
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 149 LKEKYEKDVADYKS 162
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE KK NP + F + + ERWK MS +E+ ++ A+ADK RY
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 503 DEISGY 508
E+ Y
Sbjct: 73 REMKDY 78
>gi|383858172|ref|XP_003704576.1| PREDICTED: high mobility group protein DSP1-like [Megachile
rotundata]
Length = 433
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 51/87 (58%)
Query: 423 GDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKM 482
G+ G+ KK+K KD NAPKR++S F +F ER +K NP D+ + LG++W
Sbjct: 317 GESKGRGKKRKHIKDLNAPKRSLSAFFWFCSDERGKVKMLNPEFGVGDIAKELGKKWSDA 376
Query: 483 SVEEREPYESKARADKKRYKDEISGYK 509
E + YE+ A DK RY+ E++ YK
Sbjct: 377 DPETKSKYEAMAEKDKARYEREMTAYK 403
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 441 PKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESKARADK 498
P+ M+ + FF Q R+ KK +P I F + + WK MS +E++ + A DK
Sbjct: 243 PRGRMTAYAFFVQTCRQEYKKKHPEEKIVFREFSKKCAMSWKTMSDKEKKRFHEMAEKDK 302
Query: 499 KRYKDEISGYKNPK 512
KRY E+ Y PK
Sbjct: 303 KRYDAEMQNYTPPK 316
>gi|432951224|ref|XP_004084757.1| PREDICTED: high mobility group protein B2-like [Oryzias latipes]
Length = 221
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 46/73 (63%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR S F F R IK+ NPGI+ D+ + LGE W S +++ PYE+KA
Sbjct: 114 DPNAPKRPPSAFFVFCSDHRPKIKEDNPGISIGDIAKKLGELWATQSAKDKAPYEAKAAK 173
Query: 497 DKKRYKDEISGYK 509
K++Y+ +++ Y+
Sbjct: 174 LKEKYEKDVAAYR 186
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 436 KDPNAPKRAMSGFIFFSQMERENIKKSNPG--IAFTDVGRVLGERWKKMSVEEREPYESK 493
KDPN P+ S + +F RE KK +PG + F + + ERWK MS +E+ ++
Sbjct: 26 KDPNKPRGKTSAYAYFVATCREEHKKKHPGTSVNFAEFSKKCSERWKTMSSKEKVKFDEL 85
Query: 494 ARADKKRYKDEISGYKNP 511
A+ DK RY E+ Y P
Sbjct: 86 AKTDKARYDREMKTYVPP 103
>gi|395754558|ref|XP_002832281.2| PREDICTED: high mobility group protein B3 isoform 2 [Pongo abelii]
Length = 199
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF F R IK +NPGI+ DV + LGE W ++ E++PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAK 148
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 149 LKEKYEKDVADYKS 162
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE KK NP + F + + ERWK MS +E+ ++ A+ADK RY
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 503 DEISGY 508
E+ Y
Sbjct: 73 REMKDY 78
>gi|348543650|ref|XP_003459296.1| PREDICTED: high mobility group protein B2-like isoform 1
[Oreochromis niloticus]
Length = 200
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 51/80 (63%)
Query: 430 KKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREP 489
K+ +K+KDPNAPKR S F F R ++K+ PG++ D + LGE W K+S E++P
Sbjct: 86 KRGRKRKDPNAPKRPPSAFFVFCSEYRPSVKQQYPGLSIGDCAKKLGEMWSKLSQSEKQP 145
Query: 490 YESKARADKKRYKDEISGYK 509
YE KA+ +++Y ++ Y+
Sbjct: 146 YEEKAQKLREKYDRDMVAYR 165
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 435 KKDPNAPKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYES 492
+KD N PK S + FF Q RE +K NP + F + + ERWK +S +++ +E
Sbjct: 3 RKDINKPKGKTSAYAFFVQTCREEHRKKNPEQSVNFAEFSKKCSERWKALSPSDKKCFED 62
Query: 493 KARADKKRYKDEISGYKNPK 512
A+ADK RY E+ Y PK
Sbjct: 63 MAKADKVRYNREMKDYVPPK 82
>gi|410256410|gb|JAA16172.1| high mobility group box 3 [Pan troglodytes]
Length = 213
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF F R IK +NPGI+ DV + LGE W ++ E++PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAK 148
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 149 LKEKYEKDVADYKS 162
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE KK NP + F + + ERWK MS +E+ ++ A+ADK RY
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 503 DEISGY 508
E+ Y
Sbjct: 73 REMKDY 78
>gi|145480005|ref|XP_001426025.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124393097|emb|CAK58627.1| unnamed protein product [Paramecium tetraurelia]
Length = 223
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 9/89 (10%)
Query: 429 KKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTD---------VGRVLGERW 479
K ++KK++DPNAPKR ++ F FSQ RE + + NPGI +D + ++ G++W
Sbjct: 21 KPEKKKERDPNAPKRPLTAFFLFSQKYREKVLERNPGIDLSDYQLEVKLIQISQMAGQKW 80
Query: 480 KKMSVEEREPYESKARADKKRYKDEISGY 508
+ MS +E++PY + K +Y D++ Y
Sbjct: 81 QSMSEQEKQPYVDQYNQAKSKYNDDVKEY 109
>gi|225708606|gb|ACO10149.1| High mobility group protein B2 [Osmerus mordax]
Length = 216
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 50/77 (64%)
Query: 433 KKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYES 492
K+KKDPNAPKR S F F R IK +PGI+ D+ + LGE W K + +++ PYE+
Sbjct: 88 KRKKDPNAPKRPPSAFFVFCSDHRARIKGEHPGISIGDIAKKLGELWSKQTPKDKVPYEA 147
Query: 493 KARADKKRYKDEISGYK 509
KA K++Y+ +++ Y+
Sbjct: 148 KAGKLKEKYEKDVAAYR 164
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 436 KDPNAPKRAMSGFIFFSQMERENIKKSNPG--IAFTDVGRVLGERWKKMSVEEREPYESK 493
KDPN P+ S + FF Q RE KK +PG + F++ + ERWK MS +E+ +E
Sbjct: 4 KDPNKPRGKTSSYAFFVQTCREEHKKKHPGTSVNFSEFSKKCSERWKTMSAKEKVKFEDL 63
Query: 494 ARADKKRYKDEISGYKNPK 512
A+ DK R+ E+ GY PK
Sbjct: 64 AKGDKVRFDREMKGYVPPK 82
>gi|307170751|gb|EFN62876.1| High mobility group protein 20A [Camponotus floridanus]
Length = 328
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 69/143 (48%), Gaps = 10/143 (6%)
Query: 377 SPTDDSGEEDSDASESG--GEKEK-----PAKKESKKESSSVKASTSKKKSRDGDEDGKK 429
+PT+D E + +S GE E+ P E K S + G+ +
Sbjct: 4 TPTNDVPESNGAMEQSAYNGEAEEHAAKSPGSTEEKAPDSVCDNGIKRNAIPTGNSNAPN 63
Query: 430 KKQKKKKDP---NAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEE 486
+ +K+KK P APK+ +SG+ F RE ++ NP + FT++ ++L W K+ ++
Sbjct: 64 RTKKRKKTPRDATAPKQPLSGYFLFLNDRREKVRSENPSLTFTEITKLLASEWSKLPGDQ 123
Query: 487 REPYESKARADKKRYKDEISGYK 509
++ Y A DK+RY E S YK
Sbjct: 124 KQQYLDAAEQDKERYNREFSNYK 146
>gi|47190944|emb|CAF93003.1| unnamed protein product [Tetraodon nigroviridis]
Length = 204
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 51/80 (63%)
Query: 430 KKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREP 489
K+ +K+KDPNAPKR S F F R ++K+ PG++ D + LGE W K+S E++P
Sbjct: 89 KRGRKRKDPNAPKRPPSAFFVFCSEYRPSVKQQFPGLSIGDCAKKLGEMWSKLSQSEKQP 148
Query: 490 YESKARADKKRYKDEISGYK 509
YE KA+ +++Y ++ Y+
Sbjct: 149 YEEKAQKLREKYDRDMVAYR 168
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 435 KKDPNAPKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYES 492
+KD N PK S + FF Q RE +K NP + F + + ERWK +S +++ +E
Sbjct: 6 RKDVNKPKGKTSAYAFFVQTCREEHRKKNPEQSVNFAEFSKKCSERWKALSAGDKKCFED 65
Query: 493 KARADKKRYKDEISGYKNPK 512
A+ADK RY E+ Y PK
Sbjct: 66 MAKADKVRYNREMRDYVPPK 85
>gi|397466921|ref|XP_003805186.1| PREDICTED: high mobility group protein B3 [Pan paniscus]
gi|410057106|ref|XP_001135676.3| PREDICTED: high mobility group protein B3 isoform 1 [Pan
troglodytes]
gi|426397737|ref|XP_004065063.1| PREDICTED: high mobility group protein B3 isoform 2 [Gorilla
gorilla gorilla]
gi|119619804|gb|EAW99398.1| high-mobility group box 3, isoform CRA_b [Homo sapiens]
Length = 220
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF F R IK +NPGI+ DV + LGE W ++ E++PY +KA
Sbjct: 109 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAK 168
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 169 LKEKYEKDVADYKS 182
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE KK NP + F + + ERWK MS +E+ ++ A+ADK RY
Sbjct: 33 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 92
Query: 503 DEISGY 508
E+ Y
Sbjct: 93 REMKDY 98
>gi|321455757|gb|EFX66881.1| hypothetical protein DAPPUDRAFT_189566 [Daphnia pulex]
Length = 286
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 57/98 (58%), Gaps = 3/98 (3%)
Query: 415 TSKKKSRDGDEDGKKKKQKKKKD---PNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDV 471
T+K +S G GK K++K+ P AP++ ++G++ F RE ++ +NP F D+
Sbjct: 11 TTKNRSAGGGGAGKTSKKRKRNQDLGPGAPRQPVNGYVRFLNERREQVRAANPSAGFADI 70
Query: 472 GRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
+++ + W ++ EE++ Y A D++RY+ E+ Y+
Sbjct: 71 MKIMAQEWTQLPAEEKQKYMQAAEQDRQRYQKELQEYQ 108
>gi|396490529|ref|XP_003843357.1| hypothetical protein LEMA_P074670.1 [Leptosphaeria maculans JN3]
gi|312219936|emb|CBX99878.1| hypothetical protein LEMA_P074670.1 [Leptosphaeria maculans JN3]
Length = 71
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 43/53 (81%)
Query: 449 IFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRY 501
+FF+ +RE +++ NPGI F +VG+VLGE+WK ++ ++R PYE+KA ADKKRY
Sbjct: 1 MFFANEQREKVREDNPGIKFGEVGKVLGEKWKALNEKQRTPYEAKAAADKKRY 53
>gi|729728|sp|P40618.2|HMGB3_CHICK RecName: Full=High mobility group protein B3; AltName: Full=High
mobility group protein 2a; Short=HMG-2a; AltName:
Full=High mobility group protein 4; Short=HMG-4
gi|63494|emb|CAA45065.1| HMG2a [Gallus gallus]
Length = 202
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 47/74 (63%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR S F F R IK +NPGI+ DV + LGE W +S E++PY +KA
Sbjct: 89 DPNAPKRPPSAFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDGEKQPYNNKAAK 148
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 149 LKEKYEKDVADYKS 162
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE KK NP + F + + ERWK MS +E+ ++ A+ADK RY
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKAKFDEMAKADKVRYD 72
Query: 503 DEISGY 508
E+ Y
Sbjct: 73 REMKDY 78
>gi|347921933|ref|NP_990626.2| high mobility group protein B3 [Gallus gallus]
Length = 217
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 47/74 (63%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR S F F R IK +NPGI+ DV + LGE W +S E++PY +KA
Sbjct: 104 DPNAPKRPPSAFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDGEKQPYNNKAAK 163
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 164 LKEKYEKDVADYKS 177
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE KK NP + F + + ERWK MS +E+ ++ A+ADK RY
Sbjct: 28 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKAKFDEMAKADKVRYD 87
Query: 503 DEISGY 508
E+ Y
Sbjct: 88 REMKDY 93
>gi|395844161|ref|XP_003794831.1| PREDICTED: uncharacterized protein LOC100953571 [Otolemur
garnettii]
Length = 357
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 66/120 (55%), Gaps = 13/120 (10%)
Query: 404 SKKESSSVKASTSKKKSRDGD-------------EDGKKKKQKKKKDPNAPKRAMSGFIF 450
SKK S KA++ K+KS+ + +D K KKKDPNAPK SGF
Sbjct: 209 SKKCSERWKATSGKEKSKSDEMAKADKVCCDREVKDYGPAKGGKKKDPNAPKTPPSGFFL 268
Query: 451 FSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYKN 510
F R IK +NPGI+ DV + LGE W +S E++PY +KA K++ + +++ YK+
Sbjct: 269 FCSEFRPKIKSTNPGISIGDVAKKLGEMWNSLSDSEKQPYITKAAQLKEKDEKDVADYKS 328
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 435 KKDPNAPKRAMSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYES 492
K+DP PK M + FF Q RE KK NP + + + ERWK S +E+ +
Sbjct: 170 KRDPKKPKGKMPAYAFFVQTCREEHKKKNPEVPVNLAEFSKKCSERWKATSGKEKSKSDE 229
Query: 493 KARADKKRYKDEISGY 508
A+ADK E+ Y
Sbjct: 230 MAKADKVCCDREVKDY 245
>gi|324507316|gb|ADY43106.1| FACT complex subunit Ssrp1 [Ascaris suum]
Length = 538
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 114/243 (46%), Gaps = 36/243 (14%)
Query: 90 EAVVTF---EGIAILTPRGRYSVELHLS--FLRLQGQANDFKIQYSSVVRLFLLPKSNQP 144
+A+VT +GI ++P G++ V ++ L+ + I S+ R+F+LP+ N
Sbjct: 97 DALVTLLAADGIIGISPEGKFHVIINKEDIILKSDDGGQQYTIPIDSIGRIFVLPQEN-- 154
Query: 145 HTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPS------ 198
H FV + L + P + + T YVV EL + +E+ +K+++K+E S
Sbjct: 155 HFFVALAL---------IAPLMTADWPTGYVVL-ELPLGKEV--SKFEEKIEKSEQVGDG 202
Query: 199 ----YKGLIHEVFT----TILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEK 250
G I+E T +L LSG K S +V + + G L+PLE
Sbjct: 203 ASGPVSGPINEQLTEAMPRLLSSLSGLDAEKSVLESSPSMLLSVVCTYDGKSGCLFPLED 262
Query: 251 SFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNL 310
FFFL K PT I ++ +F + GS+ DL++ +K F NI++N+++ L
Sbjct: 263 GFFFLHKYPTHIAFSDVFKADF--IDSKGSDKQS-DLVLTMKDSTMVKFCNIEKNDFYRL 319
Query: 311 FDF 313
F
Sbjct: 320 DVF 322
>gi|340923867|gb|EGS18770.1| hypothetical protein CTHT_0053790 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 576
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 56/82 (68%), Gaps = 2/82 (2%)
Query: 428 KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEER 487
+K ++ K D NAP+R S ++ F+ RE++K N ++FT++ +++GE W+ ++ EE+
Sbjct: 106 RKYRRHPKPDENAPERPPSAYVLFANKMREDLKGRN--LSFTEMAKLVGENWQNLTPEEK 163
Query: 488 EPYESKARADKKRYKDEISGYK 509
EPYE++A+ K +Y E++ YK
Sbjct: 164 EPYETQAQRCKDKYLAELAEYK 185
>gi|164661201|ref|XP_001731723.1| hypothetical protein MGL_0991 [Malassezia globosa CBS 7966]
gi|159105624|gb|EDP44509.1| hypothetical protein MGL_0991 [Malassezia globosa CBS 7966]
Length = 97
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query: 430 KKQKKKKDPNAPKRAMSGFIFFSQMERENIK-KSNPGIAFTDVGRVLGERWKKMSVEERE 488
++ K KKDP APKR +S ++FFSQ R+ K ++ + DVGR+LG +WK+MS EE++
Sbjct: 14 RRTKAKKDPAAPKRPLSAYMFFSQDWRDASKPRTLTQDSVCDVGRLLGTKWKEMSDEEKK 73
Query: 489 PYESKARADKKRYKDEISGYKN 510
PY A DK+R + E + Y N
Sbjct: 74 PYVEMASKDKERAESEKAAYAN 95
>gi|55742128|ref|NP_001006760.1| high mobility group protein 20A [Xenopus (Silurana) tropicalis]
gi|82183397|sp|Q6DIJ5.1|HM20A_XENTR RecName: Full=High mobility group protein 20A; AltName: Full=HMG
box-containing protein 20A
gi|49523172|gb|AAH75543.1| high-mobility group 20A [Xenopus (Silurana) tropicalis]
Length = 345
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 53/92 (57%)
Query: 419 KSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGER 478
K+R G +K+++ +D NAPK ++G++ F RE ++ P + F ++ R++G
Sbjct: 79 KTRRGGWTKGRKRKRSPRDNNAPKAPLTGYVRFMNERREQLRTERPDVPFPEITRIVGSE 138
Query: 479 WKKMSVEEREPYESKARADKKRYKDEISGYKN 510
W K+ E++ Y +A DK+RY E+ Y+N
Sbjct: 139 WSKLPAHEKQHYLDEAEKDKERYTKELQQYQN 170
>gi|324514003|gb|ADY45729.1| FACT complex subunit Ssrp1, partial [Ascaris suum]
Length = 492
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 114/240 (47%), Gaps = 36/240 (15%)
Query: 90 EAVVTF---EGIAILTPRGRYSVELHLS--FLRLQGQANDFKIQYSSVVRLFLLPKSNQP 144
+A+VT +GI ++P G++ V ++ L+ + I S+ R+F+LP+ N
Sbjct: 97 DALVTLLAADGIIGISPEGKFHVIINKEDIILKSDDGGQQYTIPIDSIGRIFVLPQEN-- 154
Query: 145 HTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYK---- 200
H FV + L + P + + T YVV EL + +E+ +K+++K+E S +
Sbjct: 155 HFFVALAL---------IAPLMTADWPTGYVVL-ELPLGKEV--SKFEEKIEKSEQVGDG 202
Query: 201 ------GLIHEVFT----TILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEK 250
G I+E T +L LSG K S +V + + G L+PLE
Sbjct: 203 ASGPVSGPINEQLTEAMPRLLSSLSGLDAEKSVLESSPSMLLSVVCTYDGKSGCLFPLED 262
Query: 251 SFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNL 310
FFFL K PT I ++ +F + GS+ DL++ +K F NI++N+++ L
Sbjct: 263 GFFFLHKYPTHIAFSDVFKADF--IDSKGSDKQS-DLVLTMKDSTMVKFCNIEKNDFYRL 319
>gi|332025497|gb|EGI65660.1| High mobility group protein DSP1 [Acromyrmex echinatior]
Length = 305
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 51/87 (58%)
Query: 423 GDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKM 482
G+ G+ KK+K KD NAPKR++S F +F ER +K NP D+ + LG++W
Sbjct: 185 GENKGRGKKRKHIKDHNAPKRSLSAFFWFCNDERGKVKMLNPEYGVGDIAKELGKKWSDA 244
Query: 483 SVEEREPYESKARADKKRYKDEISGYK 509
E + YE+ A DK RY+ E++ YK
Sbjct: 245 DPETKSKYEAMAEKDKARYEREMTAYK 271
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 441 PKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESKARADK 498
P+ M+ + FF Q R+ KK +P I F + + RWK MS E++ + A DK
Sbjct: 111 PRGRMTAYAFFVQTCRQEHKKKHPEEKIVFREFSKKCAMRWKTMSDIEKKRFHEMAEKDK 170
Query: 499 KRYKDEISGYKNPK 512
KRY E+ Y PK
Sbjct: 171 KRYDTEMQNYTPPK 184
>gi|145347793|ref|XP_001418346.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578575|gb|ABO96639.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 95
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR +S ++FF++ +R I K NP TDV + LG +W K + ++ YE++A
Sbjct: 24 DPNAPKRPLSAYMFFAKDQRAAILKKNPSFGVTDVAKALGAQWAKTT--DKSKYEAEAAK 81
Query: 497 DKKRYKDEISGYK 509
DKKRY+ ++ YK
Sbjct: 82 DKKRYEAAMAKYK 94
>gi|303304752|emb|CBD77423.1| high mobility group box 2 protein [Plecoglossus altivelis]
Length = 215
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR S F F R IK NPGI+ D+ + LGE W K + ++++PYE+KA
Sbjct: 92 DPNAPKRPPSAFFVFCSDHRARIKGENPGISIGDIAKKLGELWSKQTPKDKQPYEAKAGK 151
Query: 497 DKKRYKDEISGYK 509
K++Y+ +++ Y+
Sbjct: 152 LKEKYEKDVAAYR 164
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 436 KDPNAPKRAMSGFIFFSQMERENIKKSNPG--IAFTDVGRVLGERWKKMSVEEREPYESK 493
KDPN P+ S + FF Q RE KK +PG + F++ + ERWK MS +E+ +E
Sbjct: 4 KDPNKPRGKTSSYAFFVQTCREEHKKKHPGTSVNFSEFSKKCSERWKTMSAKEKVKFEDL 63
Query: 494 ARADKKRYKDEISGYKNP 511
A+ DK RY E+ GY P
Sbjct: 64 AKGDKVRYDREMKGYVPP 81
>gi|124805429|ref|XP_001350438.1| high mobility group protein [Plasmodium falciparum 3D7]
gi|6525222|gb|AAF15357.1|AF201952_1 high mobility group protein [Plasmodium falciparum]
gi|23496560|gb|AAN36118.1|AE014844_29 high mobility group protein [Plasmodium falciparum 3D7]
Length = 97
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 58/86 (67%), Gaps = 2/86 (2%)
Query: 429 KKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEE 486
+K++K KKDP+APKR++S ++FF++ +R I P ++ VG+++GE W K+ +E
Sbjct: 9 RKRRKNKKDPHAPKRSLSAYMFFAKEKRAEIISKQPELSKDVATVGKMIGEAWNKLGEKE 68
Query: 487 REPYESKARADKKRYKDEISGYKNPK 512
+ P+E KA+ DK RY+ E + Y N K
Sbjct: 69 KAPFEKKAQEDKLRYEKEKAEYANMK 94
>gi|358410870|ref|XP_003581858.1| PREDICTED: high mobility group protein B3-like [Bos taurus]
Length = 197
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 47/74 (63%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF F R IK +NPGI+ DV + LGE W +S E++PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYINKAAK 148
Query: 497 DKKRYKDEISGYKN 510
++Y+ +++ YK+
Sbjct: 149 LXEKYEKDVADYKS 162
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE KK NP + F + + ERWK MS +E+ ++ A+ADK RY
Sbjct: 13 MSAYSFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEIAKADKVRYD 72
Query: 503 DEISGY 508
E+ Y
Sbjct: 73 REMKDY 78
>gi|355762621|gb|EHH62030.1| hypothetical protein EGM_20207 [Macaca fascicularis]
Length = 201
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF F R IK +NPGI+ DV + LGE W ++ E++PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVPKKLGEMWNNLNDSEKQPYITKAAK 148
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 149 LKEKYEKDVADYKS 162
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE KK NP + F + + ERWK MS +E+ ++ A+ADK RY
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 503 DEISGY 508
E+ Y
Sbjct: 73 REMKDY 78
>gi|348538096|ref|XP_003456528.1| PREDICTED: high mobility group protein B2-like [Oreochromis
niloticus]
Length = 196
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 46/73 (63%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR S F F R IK+ NPGI+ D+ + LGE W S +++ PYE+KA
Sbjct: 91 DPNAPKRPPSAFFVFCSDHRPKIKEDNPGISIGDIAKKLGEMWATQSAKDKAPYEAKAAR 150
Query: 497 DKKRYKDEISGYK 509
K++Y+ +++ Y+
Sbjct: 151 LKEKYEKDVAAYR 163
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 436 KDPNAPKRAMSGFIFFSQMERENIKKSNPG--IAFTDVGRVLGERWKKMSVEEREPYESK 493
KDPN P+ S + FF RE KK +PG + F + + ERWK MS +E+ +E
Sbjct: 3 KDPNKPRGKTSSYAFFVATCREEHKKKHPGTSVNFAEFSKKCSERWKTMSPKEKGKFEEM 62
Query: 494 ARADKKRYKDEISGYKNP 511
A+ DK RY E+ Y P
Sbjct: 63 AKNDKVRYDREMKTYVPP 80
>gi|334323271|ref|XP_003340370.1| PREDICTED: high mobility group protein B1-like [Monodelphis
domestica]
Length = 216
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%)
Query: 432 QKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYE 491
+KK KDPNAPKR S F F R IK +PG++ DV + LGE W + ++++PYE
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYE 145
Query: 492 SKARADKKRYKDEISGYKN 510
KA K++Y+ +I+ Y+
Sbjct: 146 KKAAILKEKYEKDIAAYRT 164
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 435 KKDPNAPKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYES 492
K DP P+ MS + FF Q RE KK +P + F++ + ERWK MS +E+ ++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFQD 62
Query: 493 KARADKKRYKDEISGYKNPK 512
A+ADK Y+ E+ Y PK
Sbjct: 63 MAKADKVHYEREMKTYIPPK 82
>gi|609553|gb|AAA74556.1| HMG-T2 [Oncorhynchus mykiss]
Length = 215
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 51/83 (61%)
Query: 427 GKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEE 486
G K K+KKDPNAPKR S F F R IK NPG+ D+ + LG W K + ++
Sbjct: 83 GSKAAGKRKKDPNAPKRPPSAFFVFCAEHRGRIKADNPGMGIGDIAKQLGLLWGKQTPKD 142
Query: 487 REPYESKARADKKRYKDEISGYK 509
++P+E+KA K++Y+ +++ YK
Sbjct: 143 KQPHEAKAAKLKEKYEKDVAAYK 165
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 436 KDPNAPKRAMSGFIFFSQMERENIKKSNPG--IAFTDVGRVLGERWKKMSVEEREPYESK 493
KDPN PK S + FF RE KK +PG + F++ + ERW+ MS +E+ +E
Sbjct: 4 KDPNKPKGKTSSYAFFVATCREEHKKKHPGTSVNFSEFSKKCSERWRTMSAKEKVKFEDM 63
Query: 494 ARADKKRYKDEISGYKNPK 512
A+ DK RY ++ GY PK
Sbjct: 64 AKGDKVRYDKDMKGYVPPK 82
>gi|221221606|gb|ACM09464.1| High mobility group protein B2 [Salmo salar]
gi|223646184|gb|ACN09850.1| High mobility group protein B2 [Salmo salar]
gi|223646756|gb|ACN10136.1| High mobility group protein B2 [Salmo salar]
gi|223672031|gb|ACN12197.1| High mobility group protein B2 [Salmo salar]
gi|223672611|gb|ACN12487.1| High mobility group protein B2 [Salmo salar]
Length = 214
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 51/83 (61%)
Query: 427 GKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEE 486
G K K+KKDPNAPKR S F F R IK NPG+ D+ + LG W K + ++
Sbjct: 83 GSKAAGKRKKDPNAPKRPPSAFFVFCAEHRGRIKADNPGMGIGDIAKQLGLLWGKQTPKD 142
Query: 487 REPYESKARADKKRYKDEISGYK 509
++P+E+KA K++Y+ +++ YK
Sbjct: 143 KQPHEAKAAKLKEKYEKDVAAYK 165
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 436 KDPNAPKRAMSGFIFFSQMERENIKKSNPG--IAFTDVGRVLGERWKKMSVEEREPYESK 493
KDPN PK S + FF RE KK +PG + F++ + ERW+ MS +E+ +E
Sbjct: 4 KDPNKPKGKTSSYAFFVATCREEHKKKHPGTSVNFSEFSKKCSERWRTMSAKEKVKFEDM 63
Query: 494 ARADKKRYKDEISGYKNPK 512
A+ DK RY ++ GY PK
Sbjct: 64 AKGDKVRYDKDMKGYVPPK 82
>gi|355705241|gb|EHH31166.1| hypothetical protein EGK_21042 [Macaca mulatta]
Length = 200
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 48/74 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF F R +K +NPGI+ DV + LGE W ++ E++PY +KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKLKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAK 148
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 149 LKEKYEKDVADYKS 162
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE KK NP + F + + ERWK MS +E+ ++ A+ADK RY
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 503 DEISGY 508
E+ Y
Sbjct: 73 REMKDY 78
>gi|224013856|ref|XP_002296592.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968944|gb|EED87288.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 81
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 50/79 (63%)
Query: 431 KQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPY 490
K K KKDPNAPKR S F +S R ++K + P +AF V + + + +K + EER+ +
Sbjct: 1 KTKAKKDPNAPKRNQSAFFLYSNATRSDVKAAQPDLAFGQVAQEISKNFKALPDEERKYW 60
Query: 491 ESKARADKKRYKDEISGYK 509
+ KA ADK RY+ E++ YK
Sbjct: 61 DEKAAADKDRYQREMAAYK 79
>gi|328876155|gb|EGG24518.1| high mobility group box-containing protein [Dictyostelium
fasciculatum]
Length = 349
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 47/68 (69%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAP+R +S FIFFS+ R IK NP F ++G +LG++W+ ++ E+++ YE A
Sbjct: 259 DPNAPRRYLSPFIFFSKEHRPTIKIENPTANFGEIGALLGKKWETVTPEDKKRYEKLAAE 318
Query: 497 DKKRYKDE 504
DKKR++ E
Sbjct: 319 DKKRWEME 326
>gi|68063985|ref|XP_673987.1| high mobility group protein [Plasmodium berghei strain ANKA]
gi|56492229|emb|CAH99818.1| high mobility group protein, putative [Plasmodium berghei]
Length = 96
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 429 KKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEE 486
KK++K KKDP+APKR++S ++FF++ +R I +P ++ VG+++GE W K+ E
Sbjct: 9 KKRRKNKKDPHAPKRSLSAYMFFAKEKRAEIITRDPSLSKDVATVGKMIGEAWNKLDERE 68
Query: 487 REPYESKARADKKRYKDEISGY 508
+ PYE KA+ DK RY+ E Y
Sbjct: 69 KAPYEKKAQEDKIRYEKEKMEY 90
>gi|410930542|ref|XP_003978657.1| PREDICTED: high mobility group protein B2-like [Takifugu rubripes]
Length = 201
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%)
Query: 430 KKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREP 489
K+ +K+KDPNAPKR S F F R ++K+ PG++ D + LGE W K++ E++P
Sbjct: 86 KRGRKRKDPNAPKRPPSAFFVFCSEYRPSVKQQYPGLSIGDCAKKLGEMWSKLTQSEKQP 145
Query: 490 YESKARADKKRYKDEISGYK 509
YE KA+ +++Y ++ Y+
Sbjct: 146 YEEKAQKLREKYDRDMVAYR 165
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 435 KKDPNAPKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYES 492
+KD N PK S + FF Q RE +K NP + F + + ERWK +S +++ +E
Sbjct: 3 RKDVNKPKGKTSAYAFFVQTCREEHRKKNPEQSVNFAEFSKKCSERWKGLSASDKKCFED 62
Query: 493 KARADKKRYKDEISGYKNPK 512
A+ADK RY E+ Y PK
Sbjct: 63 MAKADKVRYNREMRDYVPPK 82
>gi|403222987|dbj|BAM41118.1| high-mobility-group protein [Theileria orientalis strain Shintoku]
Length = 93
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 54/83 (65%), Gaps = 2/83 (2%)
Query: 429 KKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEE 486
KK ++ KKDPNAPKRA+S ++FF++ +R + K NP +A VG+++G W + E
Sbjct: 10 KKGKRTKKDPNAPKRALSSYMFFAKEKRNELIKENPDLAKDVATVGKLVGAAWNSLDDSE 69
Query: 487 REPYESKARADKKRYKDEISGYK 509
+ PYE A AD++RY+ E Y+
Sbjct: 70 KAPYEKLAEADRERYEREKLEYQ 92
>gi|432860343|ref|XP_004069511.1| PREDICTED: high mobility group protein 20A-like [Oryzias latipes]
Length = 291
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 7/110 (6%)
Query: 407 ESSSVKASTSKKKSRDGDEDGKK-------KKQKKKKDPNAPKRAMSGFIFFSQMERENI 459
++ S A+T R+GDE ++ K++K KD NAPK ++G++ F RE +
Sbjct: 4 QTGSPAANTDTSTQRNGDEKPRRGSWTKGRKRKKPMKDSNAPKAPLTGYVRFMNDRREQL 63
Query: 460 KKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
+ P + F ++ R+LG W K+ EE++ Y +A DK+RY E+ Y+
Sbjct: 64 RAERPDVPFPEITRMLGNEWSKLPPEEKQRYLDEAERDKERYMRELEKYQ 113
>gi|70946314|ref|XP_742884.1| high mobility group protein [Plasmodium chabaudi chabaudi]
gi|56522109|emb|CAH79930.1| high mobility group protein, putative [Plasmodium chabaudi
chabaudi]
Length = 102
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 429 KKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEE 486
KK++K KKDP+APKR++S ++FF++ +R I +P ++ VG+++GE W K+ E
Sbjct: 15 KKRRKNKKDPHAPKRSLSAYMFFAKEKRAEIITRDPSLSKDVATVGKMIGEAWNKLDERE 74
Query: 487 REPYESKARADKKRYKDEISGY 508
+ PYE KA+ DK RY+ E Y
Sbjct: 75 KAPYEKKAQEDKLRYEKEKMEY 96
>gi|410256408|gb|JAA16171.1| high mobility group box 3 [Pan troglodytes]
Length = 213
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 49/74 (66%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DP+APKR SGF FS R IK +NPGI+ DV + LGE W ++ E++PY +KA
Sbjct: 89 DPSAPKRPPSGFFLFSSEIRPKIKSTNPGISVGDVAKKLGEMWNNLNDSEKQPYITKAAK 148
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 149 LKEKYEKDVADYKS 162
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE KK NP + F + + ERWK MS +E+ ++ A+ADK RY
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 503 DEISGY 508
E+ Y
Sbjct: 73 REMKDY 78
>gi|149410669|ref|XP_001505909.1| PREDICTED: high mobility group protein 20A [Ornithorhynchus
anatinus]
Length = 347
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
Query: 407 ESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGI 466
ESS + ++ R G G+K+K K +D NAPK ++G++ F RE ++ P +
Sbjct: 70 ESSEQRHEEEQRNKRGGWSKGRKRK-KPLRDSNAPKSPLTGYVRFMNERREQLRAKRPEV 128
Query: 467 AFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
F ++ R+LG W K+ EE++ Y +A DK+RY E+ Y+
Sbjct: 129 PFPEITRMLGNEWSKLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|330798400|ref|XP_003287241.1| hypothetical protein DICPUDRAFT_72244 [Dictyostelium purpureum]
gi|325082760|gb|EGC36232.1| hypothetical protein DICPUDRAFT_72244 [Dictyostelium purpureum]
Length = 139
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 48/73 (65%)
Query: 436 KDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKAR 495
KD NAP+R +S FIFFS+ R IK NP F ++G +LG++W ++ +E++ YE+ A
Sbjct: 47 KDENAPRRYLSPFIFFSKEYRSTIKAQNPSSTFGEIGSLLGQKWSQIGADEKKKYENMAA 106
Query: 496 ADKKRYKDEISGY 508
DKKR++ E Y
Sbjct: 107 EDKKRWEIEKKQY 119
>gi|347830295|emb|CCD45992.1| similar to transcription factor HMG [Botryotinia fuckeliana]
Length = 542
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 61/100 (61%), Gaps = 9/100 (9%)
Query: 417 KKKSRDGDE-----DGKKKKQKK--KKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFT 469
K +RD E G K+K ++ K D +AP+R S ++ FS RE++K ++FT
Sbjct: 85 KAGARDAKEGSSGPHGAKRKYRRHPKPDESAPERPPSAYVIFSNKMREDLKGR--ALSFT 142
Query: 470 DVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
++ +++GE W+ +S E+EPYE +A K+RY +E++ YK
Sbjct: 143 EIAKLVGENWQNLSPSEKEPYEHQAYTAKERYNNELAEYK 182
>gi|351715334|gb|EHB18253.1| High mobility group protein B3, partial [Heterocephalus glaber]
Length = 151
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 47/74 (63%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR GF F R IK +NPGI+ DV + LGE W +S E++PY +KA
Sbjct: 40 DPNAPKRPPPGFFLFFSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYITKAAK 99
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 100 LKEKYEKDVADYKS 113
>gi|397524101|ref|XP_003832048.1| PREDICTED: putative high mobility group protein B3-like
protein-like [Pan paniscus]
Length = 130
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 435 KKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKA 494
K DPNAPKR +SGF F IK +NPGI+ DV + LGE W ++ E++PY +K
Sbjct: 23 KNDPNAPKRPLSGFFLFCSEFCPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVTKV 82
Query: 495 RADKKRYKDEISGYKNPKPMD 515
A K+Y+ +++ YK+ +D
Sbjct: 83 -AKLKKYEKDVADYKSKGKLD 102
>gi|330804174|ref|XP_003290073.1| hypothetical protein DICPUDRAFT_13388 [Dictyostelium purpureum]
gi|325079827|gb|EGC33409.1| hypothetical protein DICPUDRAFT_13388 [Dictyostelium purpureum]
Length = 79
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 49/75 (65%)
Query: 434 KKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESK 493
K KD NAP+R +S FI+FS+ R IK NP F ++G +LG++W ++ +E++ YE+
Sbjct: 1 KNKDENAPRRYLSPFIYFSKEYRSTIKAQNPSSTFGEIGSLLGQKWSQIGADEKKKYENM 60
Query: 494 ARADKKRYKDEISGY 508
A DKKR++ E Y
Sbjct: 61 AAEDKKRWEIEKKQY 75
>gi|307191141|gb|EFN74839.1| High mobility group protein DSP1 [Camponotus floridanus]
Length = 305
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 51/87 (58%)
Query: 423 GDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKM 482
G+ G+ KK+K KD NAPKR++S F +F ER +K NP D+ + LG++W
Sbjct: 186 GENKGRGKKRKHIKDHNAPKRSLSAFFWFCNDERGKVKMLNPEYGVGDIAKELGKKWSDA 245
Query: 483 SVEEREPYESKARADKKRYKDEISGYK 509
E + YE+ A DK RY+ E++ YK
Sbjct: 246 DPETKSKYEAMAEKDKARYEREMTAYK 272
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 441 PKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESKARADK 498
P+ M+ + FF Q R+ KK +P I F + + RWK MS E++ + A DK
Sbjct: 112 PRGRMTAYAFFVQTCRQEHKKKHPEEKIVFREFSKKCAMRWKTMSDIEKKRFHEMAEKDK 171
Query: 499 KRYKDEISGYKNPK 512
KRY E+ Y PK
Sbjct: 172 KRYDAEMQNYTPPK 185
>gi|119596659|gb|EAW76253.1| hCG2042470 [Homo sapiens]
Length = 118
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 435 KKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKA 494
K DPNAPKR +SGF F IK +NPGI+ DV + LGE W ++ E++PY +K
Sbjct: 11 KNDPNAPKRPLSGFFLFCSEFCPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVTKV 70
Query: 495 RADKKRYKDEISGYKNPKPMDIDSG 519
A K+Y+ +++ YK+ +D G
Sbjct: 71 -AKLKKYEKDVADYKSKGKLDGTKG 94
>gi|291242470|ref|XP_002741130.1| PREDICTED: high mobility group 20A-like [Saccoglossus kowalevskii]
Length = 375
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%)
Query: 431 KQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPY 490
++K KD NAP+ ++G+I F RE ++ NP + F DV ++LG W K+S E++ Y
Sbjct: 103 RRKTLKDVNAPRAPLTGYIRFLNDRREKVRSDNPSLTFPDVTKMLGNEWSKLSQAEKQRY 162
Query: 491 ESKARADKKRYKDEISGYK 509
+A DK+RY E+ Y+
Sbjct: 163 LDEAEKDKERYMKELEQYQ 181
>gi|222087985|gb|ACM41855.1| high mobility group box 2-like protein [Epinephelus coioides]
Length = 212
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 44/73 (60%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR S F F R IK+ PGI+ D + LGE W S +E+ PYE+KA
Sbjct: 87 DPNAPKRPPSAFFVFCSEHRPRIKEECPGISIGDTAKKLGELWSTQSSKEKAPYEAKAAK 146
Query: 497 DKKRYKDEISGYK 509
K++Y+ E++ Y+
Sbjct: 147 LKEKYEKEVAAYR 159
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 439 NAPKRAMSGFIFFSQMERENIKKSNPG--IAFTDVGRVLGERWKKMSVEEREPYESKARA 496
N P+ S + FF RE K+ +PG + F + + ERWK MS +E+ +E A+
Sbjct: 1 NKPRGKTSSYAFFIADCREEHKRKHPGTSVGFAEFSKKCSERWKTMSAKEKAKFEELAKT 60
Query: 497 DKKRYKDEISGYKNP 511
DK RY E+ Y P
Sbjct: 61 DKIRYDREMKTYIPP 75
>gi|205539816|sp|P0C6E5.1|HG3BL_HUMAN RecName: Full=Putative high mobility group protein B3-like protein
Length = 187
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%)
Query: 434 KKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESK 493
KKKDPNAPKR SGF F K +NPGI DV + LGE WK ++ E++PY ++
Sbjct: 85 KKKDPNAPKRPPSGFFLFCSEFCPKSKSTNPGIPIGDVAKKLGEMWKNLNDSEKQPYITQ 144
Query: 494 ARADKKRYKDEISGYKN 510
A K++Y+ +++ YK+
Sbjct: 145 AAKLKEKYEKDVAVYKS 161
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPG--IAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE KK NP I F + + ERWK MS +E+ + A+ADK Y
Sbjct: 13 MSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKFNELAKADKVHYD 72
Query: 503 DEISGY 508
EI Y
Sbjct: 73 QEIKDY 78
>gi|351710199|gb|EHB13118.1| High mobility group protein B3 [Heterocephalus glaber]
Length = 191
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 54/90 (60%)
Query: 421 RDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWK 480
R+ + G K KKKKDPNA KR SGF F IK +NPGI+ DV + LGE W
Sbjct: 73 REMKDYGPAKGSKKKKDPNATKRPPSGFFLFCSEFHPKIKSTNPGISIGDVAKKLGEMWN 132
Query: 481 KMSVEEREPYESKARADKKRYKDEISGYKN 510
++ E++PY +KA K++Y+ +++ K+
Sbjct: 133 NLNDSEKQPYITKAAKLKEKYEKDVAASKS 162
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE KK NP + F + + ERWK +S +E+ ++ A+ADK Y
Sbjct: 13 MSAYAFFVQTCREEHKKKNPDVPVNFAEFSKKCSERWKTVSGKEKSKFDEMAKADKVHYD 72
Query: 503 DEISGY 508
E+ Y
Sbjct: 73 REMKDY 78
>gi|412986017|emb|CCO17217.1| nucleosome binding protein [Bathycoccus prasinos]
Length = 346
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 15/108 (13%)
Query: 416 SKKKSRDGDEDGKKKKQKKK---------------KDPNAPKRAMSGFIFFSQMERENIK 460
S K++ GD + KKKQ+K+ KDPN PK ++ F RE I
Sbjct: 133 SAKRTTRGDTNPSKKKQQKRTGSGGKSTTSSTKEMKDPNKPKGPQGPYMCFVSHNREKIV 192
Query: 461 KSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGY 508
K PGI+F + G+ LG+RW+ +S + +E Y A DKKRY+ E+ Y
Sbjct: 193 KEFPGISFGECGKKLGQRWQNLSEKGKEMYNEMAEKDKKRYEKEMEKY 240
>gi|402882719|ref|XP_003904882.1| PREDICTED: putative high mobility group protein B3-like
protein-like [Papio anubis]
Length = 132
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 434 KKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESK 493
KK DPNAPKR +SGF F +K +NPGI+ DV + LGE WK ++ E++PY +K
Sbjct: 23 KKNDPNAPKRPLSGFFLFCSEFHPKMKSTNPGISIGDVAKKLGEMWKNLNDSEKQPYVTK 82
Query: 494 ARADKKRYKDEISGYKNPKPMDIDSG 519
A +Y+ +++ YK+ +D G
Sbjct: 83 V-AKLMKYEKDVADYKSKGKLDGAKG 107
>gi|430813402|emb|CCJ29242.1| unnamed protein product [Pneumocystis jirovecii]
Length = 80
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 48/68 (70%), Gaps = 6/68 (8%)
Query: 449 IFFSQMERENIKKSNPGIAFT------DVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
+FF+Q RE++K NP F +G++LGERWK MSV++R+PYE++A+ DK+R++
Sbjct: 1 MFFAQENRESVKTENPHATFVINMSIGQIGKILGERWKTMSVKDRQPYENRAKKDKQRFE 60
Query: 503 DEISGYKN 510
E S ++N
Sbjct: 61 MEKSQWRN 68
>gi|402220154|gb|EJU00226.1| Non-histone chromosomal protein 6 [Dacryopinax sp. DJM-731 SS1]
Length = 97
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 54/83 (65%)
Query: 430 KKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREP 489
+K+ KKD +APKR +S ++ FS R+ +K NP +F DVGR+LG +WK++ EE++
Sbjct: 13 RKRGSKKDKDAPKRGLSAYLIFSNEWRDRVKAENPDASFGDVGRLLGAKWKELPDEEKKE 72
Query: 490 YESKARADKKRYKDEISGYKNPK 512
Y+ K+ DK+R E + Y+ K
Sbjct: 73 YQRKSDEDKQRAAKEKAEYEGKK 95
>gi|389633953|ref|XP_003714629.1| hypothetical protein MGG_01641 [Magnaporthe oryzae 70-15]
gi|351646962|gb|EHA54822.1| hypothetical protein MGG_01641 [Magnaporthe oryzae 70-15]
gi|440474541|gb|ELQ43278.1| hypothetical protein OOU_Y34scaffold00162g47 [Magnaporthe oryzae
Y34]
gi|440479757|gb|ELQ60505.1| hypothetical protein OOW_P131scaffold01287g37 [Magnaporthe oryzae
P131]
Length = 537
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 428 KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEER 487
+K ++ K D NAP+R S ++ FS R+++K N + FT++ +++GE W+ ++ E+
Sbjct: 110 RKYRRHPKADENAPERPPSAYVLFSNKTRDDLKDRN--LTFTEIAKLVGENWQALTPAEK 167
Query: 488 EPYESKARADKKRYKDEISGYK 509
EPYE++A+ K++Y +++ YK
Sbjct: 168 EPYETQAQTAKEKYNADLAEYK 189
>gi|403304927|ref|XP_003943030.1| PREDICTED: high mobility group protein 20A [Saimiri boliviensis
boliviensis]
Length = 347
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
Query: 399 PAKKESKKESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMEREN 458
P++ + E S + ++ R G G+K+K K +D NAPK ++G++ F RE
Sbjct: 62 PSESSNAAEGSEQRHEDEQRSKRGGWSKGRKRK-KPLRDSNAPKSPLTGYVRFMNERREQ 120
Query: 459 IKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
++ P + F ++ R+LG W K+ EE++ Y +A DK+RY E+ Y+
Sbjct: 121 LRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|387016392|gb|AFJ50315.1| High mobility group protein B1 [Crotalus adamanteus]
Length = 215
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 49/78 (62%)
Query: 432 QKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYE 491
+KK KDPNAPKR S F F R IK +PG++ DV + LGE W S E+++P+E
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTSSEDKQPFE 145
Query: 492 SKARADKKRYKDEISGYK 509
KA K++Y+ +I+ Y+
Sbjct: 146 KKAGKLKEKYEKDIAAYR 163
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 435 KKDPNAPKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYES 492
K DP P+ MS + +F Q RE KK +P + F++ + ERWK MS +E+ +E
Sbjct: 3 KGDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 493 KARADKKRYKDEISGYKNPK 512
ARADK RY+ E+ Y PK
Sbjct: 63 MARADKVRYEREMKTYVPPK 82
>gi|159478607|ref|XP_001697394.1| high mobility group protein [Chlamydomonas reinhardtii]
gi|158274552|gb|EDP00334.1| high mobility group protein [Chlamydomonas reinhardtii]
Length = 255
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 48/74 (64%)
Query: 435 KKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKA 494
+K APK+ M+ F+ FS RE++K NPGIAF ++ +V+GE+W K+S +E+ Y +
Sbjct: 116 RKASGAPKKPMTPFLHFSNAVRESVKAENPGIAFGELAKVIGEKWAKLSAQEKAEYVKRF 175
Query: 495 RADKKRYKDEISGY 508
DK+RY E+ Y
Sbjct: 176 DEDKQRYAREMQDY 189
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDE 504
M+ F+ FS R +K +PGI F +V ++LGE+W ++ +E+ YE+KA DK RY E
Sbjct: 1 MTAFLLFSNAMRAAVKAESPGIDFGEVSKILGEKWARICAKEKAEYEAKAAEDKDRYLRE 60
Query: 505 ISGYKNPKPMDIDSGNESDS 524
+ Y + K DS +E+ S
Sbjct: 61 MQEYASTKS---DSESEARS 77
>gi|154323226|ref|XP_001560927.1| hypothetical protein BC1G_00012 [Botryotinia fuckeliana B05.10]
Length = 438
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 61/100 (61%), Gaps = 9/100 (9%)
Query: 417 KKKSRDGDE-----DGKKKKQKK--KKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFT 469
K +RD E G K+K ++ K D +AP+R S ++ FS RE++K ++FT
Sbjct: 103 KAGARDAKEGSSGPHGAKRKYRRHPKPDESAPERPPSAYVIFSNKMREDLKGR--ALSFT 160
Query: 470 DVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
++ +++GE W+ +S E+EPYE +A K+RY +E++ YK
Sbjct: 161 EIAKLVGENWQNLSPSEKEPYEHQAYTAKERYNNELAEYK 200
>gi|255720981|ref|XP_002545425.1| hypothetical protein CTRG_00206 [Candida tropicalis MYA-3404]
gi|240135914|gb|EER35467.1| hypothetical protein CTRG_00206 [Candida tropicalis MYA-3404]
Length = 66
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 45/60 (75%)
Query: 449 IFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGY 508
+FF+ R+ ++ NPGI+F VG++LGE+WK ++ E++ PYE+KA ADKKRY+ E + Y
Sbjct: 1 MFFANENRDIVRAENPGISFGQVGKLLGEKWKALTPEDKTPYENKAEADKKRYEKEKAEY 60
>gi|358255365|dbj|GAA57072.1| high mobility group protein B1, partial [Clonorchis sinensis]
Length = 778
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Query: 430 KKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREP 489
K +K+KKDPNAPK+A+S F F ER +K +P +++ + LG+RW+ + + +
Sbjct: 625 KSRKRKKDPNAPKKALSAFFLFCNDERPKVKADHPDWKVSEIAKELGKRWE--TCKNKSK 682
Query: 490 YESKARADKKRYKDEISG 507
YES+A+ +K+RY+ + G
Sbjct: 683 YESQAQVEKQRYEKALPG 700
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 436 KDPNAPKRAMSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESK 493
KD + PK A++ + F Q + KK +P + F + E+WK ++ +E++ +E
Sbjct: 543 KDKSKPKGALTPYALFLQSMHADQKKKHPSVTLDFKTFSKECSEQWKNLTAKEKKKFEDL 602
Query: 494 ARADKKRYKDEISGYKNP 511
A DK+RY+ E+ Y+ P
Sbjct: 603 AAKDKERYRKEMQSYEPP 620
>gi|167521093|ref|XP_001744885.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776499|gb|EDQ90118.1| predicted protein [Monosiga brevicollis MX1]
Length = 175
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 76/147 (51%), Gaps = 9/147 (6%)
Query: 4 FMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLME-ISFHIPNSNTQF 62
F++ AFEV LA ++ Q Q +++ ILEF +DD N D ++E + F +P +
Sbjct: 37 FVLDDGVAFEVPLASLTAAQ-QQRHEAILEFQIDDMAEVN--DQVVESMRFFVPGAAASS 93
Query: 63 VGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQA 122
N F +I V +A+ E + ++ PRG + VE + SFLRL G+
Sbjct: 94 GSGANS-----FVSEINERTAVNRISGKAICMIENVKLVVPRGTHDVEFYSSFLRLHGKK 148
Query: 123 NDFKIQYSSVVRLFLLPKSNQPHTFVV 149
D KIQY +V R+ LL + ++ FV+
Sbjct: 149 FDHKIQYENVQRMHLLTQDDKFVFFVL 175
>gi|402086642|gb|EJT81540.1| hypothetical protein GGTG_01518 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 481
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 64/107 (59%), Gaps = 2/107 (1%)
Query: 403 ESKKESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKS 462
E ++ + +A T + + G +K ++ K D NAP+R S ++ FS R+++K
Sbjct: 82 EEQQRHDAQRAETPRADATAGVATKRKYRRHPKADENAPERPPSAYVLFSNKMRDDLKDQ 141
Query: 463 NPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
+ + FT++ +++GE W+ ++ E+EPYE++A+ K +Y +++ YK
Sbjct: 142 H--LTFTEIAKLVGEHWQALAPSEKEPYETQAQTAKDKYNHDLAEYK 186
>gi|47225926|emb|CAF98406.1| unnamed protein product [Tetraodon nigroviridis]
Length = 863
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%)
Query: 419 KSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGER 478
K R G +K++K KD NAPK ++G++ F RE ++ P + F ++ R+LG
Sbjct: 23 KPRRGSWTKGRKRKKPMKDSNAPKAPLTGYVRFMNDRREQLRAERPDVPFPEITRMLGNE 82
Query: 479 WKKMSVEEREPYESKARADKKRYKDEISGYK 509
W K+ EE++ Y +A DK+RY E+ Y+
Sbjct: 83 WSKLPPEEKQRYLDEAERDKERYMRELEKYQ 113
>gi|148236833|ref|NP_001082803.1| high mobility group protein 20A [Danio rerio]
gi|126632105|gb|AAI33952.1| Zgc:162335 protein [Danio rerio]
Length = 291
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 61/110 (55%), Gaps = 7/110 (6%)
Query: 407 ESSSVKASTSKKKSRDGDEDGKK-------KKQKKKKDPNAPKRAMSGFIFFSQMERENI 459
+S S A+T R+GDE ++ +++K KD NAPK ++G++ F RE +
Sbjct: 4 QSGSPGANTDNSSQRNGDEKPRRSSWTKGRRRKKPLKDSNAPKAPLTGYVRFMNERREQL 63
Query: 460 KKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
+ P + F ++ R+LG W K+ +E++ Y +A DK+RY E+ Y+
Sbjct: 64 RAERPDVPFPEITRMLGNEWSKLPADEKQRYLDEADKDKERYMRELEQYQ 113
>gi|291231769|ref|XP_002735836.1| PREDICTED: high mobility group 20 B-like [Saccoglossus kowalevskii]
Length = 546
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 46/73 (63%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
D +PK + ++ + +R +K+ NP +AFT+V ++LG +W MS E+++ Y +A
Sbjct: 256 DTGSPKAPTTAYVLYLNEQRVKVKEENPEMAFTEVTKLLGSQWSSMSAEDKQKYVEEAEN 315
Query: 497 DKKRYKDEISGYK 509
DKKRY DE+ Y+
Sbjct: 316 DKKRYIDELKAYQ 328
>gi|397502952|ref|XP_003822100.1| PREDICTED: high mobility group protein B3-like [Pan paniscus]
gi|410056873|ref|XP_003317692.2| PREDICTED: high mobility group protein B3-like [Pan troglodytes]
Length = 221
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 51/86 (59%)
Query: 434 KKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESK 493
KKKDPNA KR +SGF F IK +NPGI+ D+ + LGE W S E++PY +K
Sbjct: 105 KKKDPNALKRPLSGFFLFCSEFHPKIKSTNPGISIGDMAKKLGEMWINYSDREKQPYITK 164
Query: 494 ARADKKRYKDEISGYKNPKPMDIDSG 519
A K++Y+ +++ YK+ D G
Sbjct: 165 AADLKEKYEKDVADYKSKGKFDSAKG 190
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKA 494
D PK MS + FF+Q RE KK NP + F + + E+ K MS +E+ ++ A
Sbjct: 25 DHKKPKGKMSAYAFFAQTCREEHKKKNPEVPVNFVEFSKKCSEKRKTMSGKEKTKFDEMA 84
Query: 495 RADKKRYKDEI 505
+ DK Y E+
Sbjct: 85 KVDKVHYDQEM 95
>gi|219110207|ref|XP_002176855.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411390|gb|EEC51318.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 200
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 47/72 (65%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPN PKRAMS F FSQ R N+K+ P +F +V R+L ++K+++ +E +E KA
Sbjct: 37 DPNKPKRAMSAFFLFSQGNRVNVKEEFPEASFGEVARILARKYKELTEKEMRKWEKKAEQ 96
Query: 497 DKKRYKDEISGY 508
DK RY++E+ Y
Sbjct: 97 DKIRYQEEMKHY 108
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 46/73 (63%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR MS + +S R +K NP F + R++ E++K +S +ER+ ++ KA A
Sbjct: 126 DPNAPKRNMSAYFLYSIEVRPTVKADNPEATFGGIARLISEKFKALSPKERKVWDDKAIA 185
Query: 497 DKKRYKDEISGYK 509
DK+RY E+ YK
Sbjct: 186 DKERYTSEMEIYK 198
>gi|393236123|gb|EJD43674.1| hypothetical protein AURDEDRAFT_114700 [Auricularia delicata
TFB-10046 SS5]
Length = 125
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 58/94 (61%), Gaps = 9/94 (9%)
Query: 412 KASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDV 471
K +TS K R D K KK+K PKRA+S ++FF + RE IK+ NP AF ++
Sbjct: 3 KDTTSDKPKRKAPAD----KPKKEKKEAGPKRALSAYMFFVKDWRERIKEENPDAAFGEI 58
Query: 472 GRVLGERWKKMSVEEREPY-----ESKARADKKR 500
G+++G +WK+MS E+++PY E K RA+K R
Sbjct: 59 GKLMGAKWKEMSDEDKQPYVEQAEEDKVRAEKDR 92
>gi|327283394|ref|XP_003226426.1| PREDICTED: high mobility group protein 20A-like [Anolis
carolinensis]
Length = 347
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Query: 404 SKKESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSN 463
+K E+S + ++ R G G+K+K K +D NAPK ++G++ F RE ++
Sbjct: 67 NKAENSEPRPEEEQRTKRGGWSKGRKRK-KPLRDSNAPKSPLTGYVRFMNERREQLRAKR 125
Query: 464 PGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
P + F ++ R+LG W K+ EE+ Y +A DK+RY E+ Y+
Sbjct: 126 PEVPFPEITRMLGNEWSKLPPEEKRRYLDEADRDKERYMRELEQYQ 171
>gi|145541886|ref|XP_001456631.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124424443|emb|CAK89234.1| unnamed protein product [Paramecium tetraurelia]
Length = 235
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 49/77 (63%)
Query: 432 QKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYE 491
+KK++DPNAPK+ ++ F F+Q RE + NP I T + ++ G +W MS +E++PY
Sbjct: 42 KKKERDPNAPKKPLTPFFLFNQKYREKVVDRNPEIKLTQISQMAGNKWSSMSEQEKKPYV 101
Query: 492 SKARADKKRYKDEISGY 508
+ A K++Y+ E+ Y
Sbjct: 102 DQYNAAKEKYEQELKDY 118
>gi|351702997|gb|EHB05916.1| High mobility group protein B1 [Heterocephalus glaber]
Length = 204
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 49/78 (62%)
Query: 432 QKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYE 491
+KK KDPNAPKRA S F F R IK +PG++ DV + LGE W + +++PYE
Sbjct: 86 KKKFKDPNAPKRAPSTFFLFCSEYRPKIKGEHPGLSTGDVAKKLGEMWNNTAAGDKQPYE 145
Query: 492 SKARADKKRYKDEISGYK 509
KA K++Y+ +I+ Y+
Sbjct: 146 KKAAELKEKYEKDIAAYR 163
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 435 KKDPNAPKRAMSGFIFFSQMERENIKK--SNPGIAFTDVGRVLGERWKKMSVEEREPYES 492
K DP P+ MS + FF Q RE KK S+ + F++ + ERWK MS +E+ +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHSDASVKFSEYSKKCSERWKTMSAKEKGTFED 62
Query: 493 KARADKKRYKDEISGYKNPK 512
A+ DK RY+ ++ Y PK
Sbjct: 63 MAKVDKARYERKMKTYIPPK 82
>gi|320170534|gb|EFW47433.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 851
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 46/75 (61%)
Query: 430 KKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREP 489
+K K++KDP APKRA ++F++Q R ++ +P + + LGE W+ + V ER P
Sbjct: 533 RKIKRRKDPAAPKRASPAYLFYAQHARSSVAADDPTASNKAIASKLGEMWRALPVGERAP 592
Query: 490 YESKARADKKRYKDE 504
+E+ A+ DK RY E
Sbjct: 593 FEALAQRDKDRYDSE 607
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 441 PKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKR 500
PK+ + F++F + R ++ P D+ +G+ W + EE+ YE A ADK R
Sbjct: 440 PKKPIPAFLYFGRAVRPQVRAMYPDDKLADIATKIGKLWAALPFEEKAHYEQLASADKLR 499
Query: 501 YKDEIS 506
Y++E S
Sbjct: 500 YREEAS 505
>gi|444518919|gb|ELV12461.1| High mobility group protein B3 [Tupaia chinensis]
Length = 185
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 54/90 (60%), Gaps = 2/90 (2%)
Query: 421 RDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWK 480
R+ + G K KKK+DPNAPKR SGF F I+ +NPGI+ DV + LGE W
Sbjct: 73 REMKDYGPAKGGKKKRDPNAPKRPPSGFFLFCSEFCPKIRSNNPGISIGDVAKKLGEMWN 132
Query: 481 KMSVEEREPYESKARADKKRYKDEISGYKN 510
S E++PY +K A K +Y+ +++ YK+
Sbjct: 133 NKSDSEKQPYNTK--ATKLKYEKDVADYKS 160
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 445 MSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + FF Q RE KK NP + F + + ERWK MS +E+ ++ A+ +K Y
Sbjct: 13 MSAYTFFVQTCREKHKKKNPEVPVKFAEFSKKGSERWKTMSGKEKSKFDEMAKVNKVHYD 72
Query: 503 DEISGY 508
E+ Y
Sbjct: 73 REMKDY 78
>gi|119623033|gb|EAX02628.1| hCG1644442 [Homo sapiens]
Length = 201
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 51/86 (59%)
Query: 434 KKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESK 493
KKKDPNA KR +SGF F IK +NPGI+ D+ + LGE W S E++PY +K
Sbjct: 85 KKKDPNALKRPLSGFFLFCSEFHPKIKSTNPGISIGDMAKKLGEMWINYSDREKQPYITK 144
Query: 494 ARADKKRYKDEISGYKNPKPMDIDSG 519
A K++Y+ +++ YK+ D G
Sbjct: 145 AADLKEKYEKDVADYKSKGKFDSAKG 170
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKA 494
D PK MS + FF+Q RE KK NP + F + + E+ K MS +E+ ++ A
Sbjct: 5 DHKKPKGKMSAYAFFAQTCREEHKKKNPEVPVNFVEFSKKCSEKRKTMSGKEKTKFDEMA 64
Query: 495 RADKKRYKDEI 505
+ DK Y E+
Sbjct: 65 KVDKVHYDQEM 75
>gi|330799186|ref|XP_003287628.1| hypothetical protein DICPUDRAFT_91948 [Dictyostelium purpureum]
gi|325082355|gb|EGC35839.1| hypothetical protein DICPUDRAFT_91948 [Dictyostelium purpureum]
Length = 141
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
D NAP+R +S FI+FS+ R +K NP F ++G +LG++W ++S +E++ YE A
Sbjct: 50 DENAPRRYLSPFIYFSKEYRPTVKAQNPSSTFGEIGSLLGQKWSQISADEKKKYEKMAAE 109
Query: 497 DKKRYKDEISGYK---NPKPMDIDSGNESDS 524
DKKR++ E Y+ +P + SG+ +S
Sbjct: 110 DKKRWEVEKKQYEEKLKSQPAEPSSGSSDES 140
>gi|90103305|gb|ABD85497.1| high mobility group box 1-like [Ictalurus punctatus]
Length = 182
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 51/79 (64%)
Query: 431 KQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPY 490
K+K+ KDPNAPKR S F F R +K+ PG++ DV + LGE W K S EE++PY
Sbjct: 65 KKKRFKDPNAPKRPPSAFFIFCAEYRPKVKEETPGLSIGDVAKKLGEMWNKTSAEEKQPY 124
Query: 491 ESKARADKKRYKDEISGYK 509
E KA K++Y+ +I+ Y+
Sbjct: 125 EKKAAKLKEKYEKDIAAYR 143
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 453 QMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYKN 510
Q RE KK +P + F++ + ERWK MS +E+ +E AR DK RY+ E+ Y
Sbjct: 1 QTCREEHKKKHPDTSVNFSEFSKKCSERWKTMSAKEKGKFEDMARLDKARYEREMKNYVP 60
Query: 511 PK 512
P+
Sbjct: 61 PR 62
>gi|156101624|ref|XP_001616505.1| high mobility group protein [Plasmodium vivax Sal-1]
gi|148805379|gb|EDL46778.1| high mobility group protein, putative [Plasmodium vivax]
Length = 107
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 429 KKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEE 486
+K++K KKDP+APKR++S ++FF++ +R I +P ++ VG+++GE W K+ E
Sbjct: 19 RKRRKNKKDPHAPKRSLSAYMFFAKEKRAEIISRDPDLSKDVATVGKMIGEAWNKLDERE 78
Query: 487 REPYESKARADKKRYKDEISGY 508
+ PYE KA+ DK RY+ E Y
Sbjct: 79 KAPYEKKAQEDKLRYEREKVEY 100
>gi|348520102|ref|XP_003447568.1| PREDICTED: high mobility group protein 20A-like [Oreochromis
niloticus]
Length = 291
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 60/110 (54%), Gaps = 7/110 (6%)
Query: 407 ESSSVKASTSKKKSRDGDEDGKK-------KKQKKKKDPNAPKRAMSGFIFFSQMERENI 459
++ S A+ R+GDE ++ K++K KD NAPK ++G++ F RE +
Sbjct: 4 QTGSPAANADNNSQRNGDEKPRRGSWTKGRKRKKPMKDSNAPKAPLTGYVRFMNDRREQL 63
Query: 460 KKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
+ P + F ++ R+LG W K+ EE++ Y +A DK+RY E+ Y+
Sbjct: 64 RAERPDVPFPEITRMLGNEWSKLPPEEKQRYLDEAERDKERYMRELEKYQ 113
>gi|321478856|gb|EFX89813.1| hypothetical protein DAPPUDRAFT_232871 [Daphnia pulex]
Length = 190
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 53/83 (63%)
Query: 427 GKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEE 486
G+ +K+K+ KDPNAPKR++S F +F ER N+K ++P D+ + LG++W ++
Sbjct: 88 GRGRKRKQVKDPNAPKRSLSAFFWFCNDERGNVKAAHPEYTVGDIAKDLGKQWGEVDEST 147
Query: 487 REPYESKARADKKRYKDEISGYK 509
+ YE+ A DK RY+ E + YK
Sbjct: 148 KSKYEAMAEKDKARYERENNAYK 170
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 435 KKDPNAPKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYES 492
K D N P+ M+ + FF Q RE KK +P + F++ + ERWK MS +E++ ++
Sbjct: 5 KADANKPRGRMTAYAFFVQTCREEHKKKHPDENVVFSEFSKKCAERWKTMSDKEKKRFQE 64
Query: 493 KARADKKRYKDEISGYKNPKPMDIDSG 519
A DK R+ DE+ Y +P D +G
Sbjct: 65 MAERDKVRFDDEMRHY---EPADKGAG 88
>gi|440632195|gb|ELR02114.1| hypothetical protein GMDG_05273 [Geomyces destructans 20631-21]
Length = 541
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 66/109 (60%), Gaps = 7/109 (6%)
Query: 406 KESSSVKASTSKKKSRDGD----EDGKKK-KQKKKKDPNAPKRAMSGFIFFSQMERENIK 460
K+S K +T + +DG+ GK+K ++ K D NAP+R S ++ FS RE++K
Sbjct: 81 KQSDDTKGATPRSDGKDGNASTQPSGKRKYRRHPKPDENAPERPPSAYVIFSNKMREDLK 140
Query: 461 KSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
++FT++ +++GE W+ ++ E+E YE +A A K++Y E++ Y+
Sbjct: 141 GR--PLSFTEIAKLVGENWQNLAPSEKELYEQQAFAAKEKYTVELAEYR 187
>gi|332260744|ref|XP_003279440.1| PREDICTED: uncharacterized protein LOC100604184 [Nomascus
leucogenys]
Length = 414
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 4/82 (4%)
Query: 433 KKKKDPNAPKRAMSGFIFFSQMERENIKKSNPG----IAFTDVGRVLGERWKKMSVEERE 488
KKKKDPNAP+R +SGF F R IK +NPG F DV + LGE WK ++ E++
Sbjct: 85 KKKKDPNAPQRPLSGFFLFCSEFRPKIKSTNPGKTGIFGFGDVAKKLGEMWKNLNDSEKQ 144
Query: 489 PYESKARADKKRYKDEISGYKN 510
P+ ++A K++Y+ +++ K+
Sbjct: 145 PHITQAAKLKEKYEKDVAVCKS 166
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 435 KKDPNAPKRAMSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYES 492
K DP PK MS + FF Q RE KK NP + F + + ERWK +S +++ +
Sbjct: 3 KGDPTKPKGKMSAYAFFVQTCREEHKKKNPKVPVNFAEFSKKCSERWKTISEKKKSEFNE 62
Query: 493 KARADKKRYKDEISGY 508
A+ADK Y +I Y
Sbjct: 63 LAKADKVHYDQKIKDY 78
>gi|405965825|gb|EKC31179.1| Phospholysine phosphohistidine inorganic pyrophosphate phosphatase
[Crassostrea gigas]
Length = 718
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 64/111 (57%), Gaps = 10/111 (9%)
Query: 399 PAKKESKKESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMEREN 458
P++KES+K ++K R G GK++K + NAPK ++G++ ++ R+
Sbjct: 153 PSEKESQK--------VPEQKKRGGWPKGKRRK--NVPNVNAPKAPLTGYVMYAIERRQE 202
Query: 459 IKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
IK SNP ++F +V ++LG W + ++++ Y A DKKRY +++ ++
Sbjct: 203 IKASNPELSFPEVTKILGNEWSTLDSQKKQKYLLAAEEDKKRYMEQLKTFQ 253
>gi|384489718|gb|EIE80940.1| hypothetical protein RO3G_05645 [Rhizopus delemar RA 99-880]
Length = 176
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 53/84 (63%)
Query: 426 DGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVE 485
D KK+K +KDPNAPKR +S ++ +SQ R + +P + ++ +++GE W K+S +
Sbjct: 40 DHVNKKKKVEKDPNAPKRNLSSYMLYSQAVRPKVAAEHPDMKAIEIAKLVGEMWNKLSEK 99
Query: 486 EREPYESKARADKKRYKDEISGYK 509
E+ PY +A +K R++ E + YK
Sbjct: 100 EKAPYIKQAEKEKIRFEKENASYK 123
>gi|449500530|ref|XP_002187513.2| PREDICTED: high mobility group protein B2 [Taeniopygia guttata]
Length = 145
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR S F F R IK +PG++ D + LGE W + S ++++PYE KA
Sbjct: 40 DPNAPKRPPSAFFLFCSEHRPKIKNEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAK 99
Query: 497 DKKRYKDEISGYK 509
K++Y+ +I+ Y+
Sbjct: 100 LKEKYEKDIAAYR 112
>gi|367018942|ref|XP_003658756.1| hypothetical protein MYCTH_2294934 [Myceliophthora thermophila ATCC
42464]
gi|347006023|gb|AEO53511.1| hypothetical protein MYCTH_2294934 [Myceliophthora thermophila ATCC
42464]
Length = 521
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 428 KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEER 487
+K ++ K D NAP+R S ++ FS RE +K N ++F ++ +++GE W+ +S E+
Sbjct: 106 RKYRRHPKPDENAPERPPSAYVLFSNKMREELKGRN--LSFAEIAKLVGENWQNLSAAEK 163
Query: 488 EPYESKARADKKRYKDEISGYK 509
EP+E++A+A K +Y +++ YK
Sbjct: 164 EPFEARAQAIKDKYLADLAEYK 185
>gi|221059780|ref|XP_002260535.1| High mobility group protein [Plasmodium knowlesi strain H]
gi|193810609|emb|CAQ42507.1| High mobility group protein, putative [Plasmodium knowlesi strain
H]
Length = 104
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 429 KKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEE 486
+K++K KKDP+APKR++S ++FF++ +R I +P ++ VG+++GE W K+ E
Sbjct: 16 RKRRKNKKDPHAPKRSLSAYMFFAKEKRAEIISRDPDLSKDVATVGKMIGEAWNKLDERE 75
Query: 487 REPYESKARADKKRYKDEISGY 508
+ PYE KA+ DK RY+ E Y
Sbjct: 76 KAPYEKKAQEDKVRYEREKVEY 97
>gi|391345046|ref|XP_003746804.1| PREDICTED: high mobility group protein DSP1-like [Metaseiulus
occidentalis]
Length = 186
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 55/96 (57%), Gaps = 5/96 (5%)
Query: 430 KKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREP 489
K +K+KDPNAPKRA+S F F Q ER ++ +V + LG++W++ + E++
Sbjct: 85 KAARKEKDPNAPKRALSAFFHFCQDERPKVRAELGQSTVGEVAKQLGKKWQECTGEQKSK 144
Query: 490 YESKARADKKRYKDEISGYKN-----PKPMDIDSGN 520
YE A DK+RY+ E++ YKN P P D N
Sbjct: 145 YEQLAAKDKQRYELEMAAYKNGGVAPPAPPKRDENN 180
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 441 PKRAMSGFIFFSQMERENIKKSNPG--IAFTDVGRVLGERWKKMSVEEREPYESKARADK 498
P+ S + +F Q RE KK +P + F + + ERWK M+ E++ ++ A DK
Sbjct: 7 PRGRTSAYAYFVQTCREEYKKMHPNENVVFAEFSKKCAERWKTMNEPEKQRFQLMAAKDK 66
Query: 499 KRYKDEISGY 508
KRY+DE+S Y
Sbjct: 67 KRYEDEMSTY 76
>gi|225709792|gb|ACO10742.1| High mobility group protein B2 [Caligus rogercresseyi]
Length = 215
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 50/83 (60%)
Query: 427 GKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEE 486
G K K+KKDPNAPKR S F F R IK NPG+ D+ + LG W K + ++
Sbjct: 83 GSKAAGKRKKDPNAPKRPPSAFFVFCAEHRGRIKADNPGMGIGDIAKQLGLLWGKQTPKD 142
Query: 487 REPYESKARADKKRYKDEISGYK 509
+ P+E+KA K++Y+ +++ YK
Sbjct: 143 KLPHEAKATKLKEKYEKDVAAYK 165
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 436 KDPNAPKRAMSGFIFFSQMERENIKKSNPG--IAFTDVGRVLGERWKKMSVEEREPYESK 493
KDPN PK S + FF RE KK +PG + F++ + ERW+ MS +E+ +E
Sbjct: 4 KDPNKPKGKTSSYAFFVATCREEHKKKHPGTSVNFSEFSKKCSERWRTMSAKEKVKFEDM 63
Query: 494 ARADKKRYKDEISGYKNPK 512
A+ DK RY ++ GY PK
Sbjct: 64 AKGDKVRYDKDMKGYVPPK 82
>gi|145536343|ref|XP_001453899.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421632|emb|CAK86502.1| unnamed protein product [Paramecium tetraurelia]
Length = 236
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 49/77 (63%)
Query: 432 QKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYE 491
+KK++DPNAPK+ ++ F F+Q R+ + + NP I T + ++ G +W MS +E++PY
Sbjct: 43 KKKERDPNAPKKPLTAFFLFNQKYRQKVVERNPEIKLTQISQMAGNKWTSMSEQEKKPYL 102
Query: 492 SKARADKKRYKDEISGY 508
+ A K++Y E+ Y
Sbjct: 103 DQYNAAKEKYDQELKDY 119
>gi|322797840|gb|EFZ19748.1| hypothetical protein SINV_09636 [Solenopsis invicta]
Length = 203
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 51/87 (58%)
Query: 423 GDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKM 482
G+ G+ KK+K KD NAPKR++S F +F ER +K NP D+ + LG++W
Sbjct: 83 GENKGRGKKRKHIKDHNAPKRSLSAFFWFCNDERGKVKMLNPEYGVGDIAKELGKKWSDA 142
Query: 483 SVEEREPYESKARADKKRYKDEISGYK 509
E + YE+ A DK RY+ E++ YK
Sbjct: 143 DPETKSKYEAMAEKDKARYEREMTAYK 169
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 441 PKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESKARADK 498
P+ M+ + FF Q R+ KK +P I F + + RWK MS E++ + A DK
Sbjct: 9 PRGRMTAYAFFVQTCRQEHKKKHPEEKIVFREFSKKCAMRWKTMSDIEKKRFHEMAEKDK 68
Query: 499 KRYKDEISGYKNPK 512
KRY E+ Y PK
Sbjct: 69 KRYDTEMQNYTPPK 82
>gi|302673176|ref|XP_003026275.1| hypothetical protein SCHCODRAFT_62473 [Schizophyllum commune H4-8]
gi|300099956|gb|EFI91372.1| hypothetical protein SCHCODRAFT_62473 [Schizophyllum commune H4-8]
Length = 81
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 52/81 (64%)
Query: 428 KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEER 487
+KK+ KK+KDPNAPKR + +I + R+++K+ NPG+ T++ R + E WK + +E+
Sbjct: 1 RKKRAKKEKDPNAPKRPATSYILYQNDCRQSMKEKNPGLHNTELLRYISETWKSLPEQEK 60
Query: 488 EPYESKARADKKRYKDEISGY 508
YE+KA K Y+D + Y
Sbjct: 61 SSYEAKAAKLKHDYEDAVREY 81
>gi|213514690|ref|NP_001133170.1| high-mobility group box 2 [Salmo salar]
gi|197632301|gb|ACH70874.1| high-mobility group box 2 [Salmo salar]
gi|221219834|gb|ACM08578.1| High mobility group protein B2 [Salmo salar]
gi|221220870|gb|ACM09096.1| High mobility group protein B2 [Salmo salar]
gi|223646276|gb|ACN09896.1| High mobility group protein B2 [Salmo salar]
gi|223646962|gb|ACN10239.1| High mobility group protein B2 [Salmo salar]
gi|223672123|gb|ACN12243.1| High mobility group protein B2 [Salmo salar]
gi|223672825|gb|ACN12594.1| High mobility group protein B2 [Salmo salar]
Length = 214
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 50/83 (60%)
Query: 427 GKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEE 486
G K K+KKDPNAPKR S F F R IK NPG+ D+ + LG W K + ++
Sbjct: 83 GSKAAGKRKKDPNAPKRPPSAFFVFCAEHRGRIKADNPGMGIGDIAKQLGLLWGKQTPKD 142
Query: 487 REPYESKARADKKRYKDEISGYK 509
+ P+E+KA K++Y+ +++ YK
Sbjct: 143 KLPHEAKAAKLKEKYEKDVAAYK 165
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 436 KDPNAPKRAMSGFIFFSQMERENIKKSNPG--IAFTDVGRVLGERWKKMSVEEREPYESK 493
KDPN PK S + FF RE KK +PG + F++ + ERW+ MS +E+ +E
Sbjct: 4 KDPNKPKGKTSSYAFFVATCREEHKKKHPGTSVNFSEFSKKCSERWRTMSAKEKVKFEDM 63
Query: 494 ARADKKRYKDEISGYKNPK 512
A+ DK RY ++ GY PK
Sbjct: 64 AKGDKVRYDKDMKGYVPPK 82
>gi|28279681|gb|AAH45917.1| High-mobility group box 1 [Danio rerio]
gi|182891806|gb|AAI65307.1| Hmgb1 protein [Danio rerio]
Length = 205
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 53/80 (66%)
Query: 431 KQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPY 490
K+K+ KDPNAPKR S F F R +K+ PG++ DV + LGE W K+S EE++PY
Sbjct: 84 KKKRFKDPNAPKRPPSAFFIFCSEFRPKVKEETPGLSIGDVAKRLGEMWNKISSEEKQPY 143
Query: 491 ESKARADKKRYKDEISGYKN 510
E KA K++Y+ +I+ Y++
Sbjct: 144 EKKAAKLKEKYEKDIAAYRS 163
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 436 KDPNAPKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESK 493
KDP P+ MS + +F Q RE KK +P + F++ + ERWK MS +E+ +E
Sbjct: 3 KDPTKPRGKMSSYAYFVQTCREEHKKKHPEATVNFSEFSKKCSERWKTMSAKEKGKFEDM 62
Query: 494 ARADKKRYKDEISGYKNPK 512
A+ DK RY+ E+ Y PK
Sbjct: 63 AKLDKARYEREMKNYIPPK 81
>gi|42476233|ref|NP_955849.2| high mobility group protein B1 [Danio rerio]
gi|37681827|gb|AAQ97791.1| high-mobility group box 1 [Danio rerio]
gi|45595607|gb|AAH67193.1| High-mobility group box 1 [Danio rerio]
Length = 205
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 53/80 (66%)
Query: 431 KQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPY 490
K+K+ KDPNAPKR S F F R +K+ PG++ DV + LGE W K+S EE++PY
Sbjct: 84 KKKRFKDPNAPKRPPSAFFIFCSEFRPKVKEETPGLSIGDVAKRLGEMWNKISSEEKQPY 143
Query: 491 ESKARADKKRYKDEISGYKN 510
E KA K++Y+ +I+ Y++
Sbjct: 144 EKKAAKLKEKYEKDIAAYRS 163
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 436 KDPNAPKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESK 493
KDP P+ MS + +F Q RE KK +P + F++ + ERWK MS +E+ +E
Sbjct: 3 KDPTKPRGKMSSYAYFVQTCREEHKKKHPEATVNFSEFSKKCSERWKTMSAKEKGKFEDM 62
Query: 494 ARADKKRYKDEISGYKNPK 512
A+ DK RY+ E+ Y PK
Sbjct: 63 AKLDKARYEREMKNYIPPK 81
>gi|255083979|ref|XP_002508564.1| animal specific-mbd4, 5 and 6 [Micromonas sp. RCC299]
gi|226523841|gb|ACO69822.1| animal specific-mbd4, 5 and 6 [Micromonas sp. RCC299]
Length = 288
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPN PK ++ F Q+ R I +NP + F ++ ++LGE+WK M R YE A
Sbjct: 114 DPNKPKGPKGAYMCFVQIARPKINAANPDLKFAEIAKMLGEQWKNMDTTTRAGYEKMAEQ 173
Query: 497 DKKRYKDEISGY 508
DK+RY+ EI+ Y
Sbjct: 174 DKERYQREIAAY 185
>gi|126272184|ref|XP_001362258.1| PREDICTED: high mobility group protein 20A [Monodelphis domestica]
Length = 347
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
Query: 407 ESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGI 466
E+S + ++ R G G+K+K K +D NAPK ++G++ F RE ++ P +
Sbjct: 70 ENSEQRHEDEQRNKRGGWSKGRKRK-KPLRDSNAPKSPLTGYVRFMNERREQLRAKRPEV 128
Query: 467 AFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
F ++ R+LG W K+ EE++ Y +A DK+RY E+ Y+
Sbjct: 129 PFPEITRMLGNEWSKLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|1870101|emb|CAA85040.1| NHP6B [Saccharomyces cerevisiae]
Length = 61
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 40/53 (75%)
Query: 456 RENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGY 508
R+ ++ NP + F VGR+LGERWK ++ EE++PYESKA+ADKKRY+ E Y
Sbjct: 4 RDIVRSENPDVTFGQVGRILGERWKALTAEEKQPYESKAQADKKRYESEKELY 56
>gi|344248925|gb|EGW05029.1| hypothetical protein I79_015964 [Cricetulus griseus]
Length = 164
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 432 QKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYE 491
+KK KDPNAPKR S F+F S+ R K +PG++ DV + LGE W + +++PYE
Sbjct: 36 KKKFKDPNAPKRPPSAFLFCSEY-RPKTKGEHPGLSLGDVAKKLGEMWNNTAAGDKQPYE 94
Query: 492 SKARADKKRYKDEISGYK 509
KA K++Y+ +I+ Y+
Sbjct: 95 KKAAKLKEQYEKDIAAYR 112
>gi|449266367|gb|EMC77420.1| High mobility group protein 20A [Columba livia]
Length = 345
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 62/119 (52%), Gaps = 1/119 (0%)
Query: 405 KKESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNP 464
+ E SS+ ++ R G G+K+K K +D NAPK ++G++ F RE ++ P
Sbjct: 66 QSEFSSIFILQQQRTKRGGWAKGRKRK-KPLRDTNAPKSPLTGYVRFMNERREQLRAKRP 124
Query: 465 GIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYKNPKPMDIDSGNESD 523
+ F ++ R+LG W K+ EE+ Y +A DK+RY E+ Y+ + + S D
Sbjct: 125 EVPFPEITRMLGNEWSKLPPEEKRRYLDEADRDKERYMRELEQYQKTEAYKVFSRKAQD 183
>gi|225715078|gb|ACO13385.1| High mobility group protein B3 [Esox lucius]
Length = 204
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 429 KKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEERE 488
K+ +K KKDPNAPKR SGF F +R IK +P DV + LGE W ++ ++
Sbjct: 83 KRGKKAKKDPNAPKRPPSGFFVFCAEQRPKIKAQHPSFGIGDVAKKLGEAWNNLTDSSKQ 142
Query: 489 PYESKARADKKRYKDEISGYK 509
PY +KA K++Y+ +++ YK
Sbjct: 143 PYLAKANKLKEKYRKDVADYK 163
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 435 KKDPNAPKRAMSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYES 492
K D PK MS + +F Q RE KK NP I F++ + RWK MS +E+ +E
Sbjct: 3 KGDARKPKGKMSAYAYFVQTCREEHKKKNPEIPVNFSEFSKKCAGRWKTMSPKEKSKFED 62
Query: 493 KARADKKRYKDEISGYKNP 511
+A DK RY+ E++ Y P
Sbjct: 63 QANQDKARYESEMTSYGPP 81
>gi|326918606|ref|XP_003205579.1| PREDICTED: high mobility group protein B2-like [Meleagris
gallopavo]
Length = 246
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR S F F R IK +PG++ D + LGE W + S ++++PYE KA
Sbjct: 129 DPNAPKRPPSAFFLFCSEHRPKIKNDHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAK 188
Query: 497 DKKRYKDEISGYK 509
K++Y+ +I+ Y+
Sbjct: 189 LKEKYEKDIAAYR 201
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 445 MSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYK 502
MS + +F Q RE KK +P + F + R ERWK MS +E+ +E A+ DK RY
Sbjct: 51 MSSYAYFVQTCREEHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFEEMAKGDKARYD 110
Query: 503 DEISGYKNP 511
E+ Y P
Sbjct: 111 REMKNYVPP 119
>gi|168012074|ref|XP_001758727.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689864|gb|EDQ76233.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 92
Score = 67.8 bits (164), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 53/76 (69%)
Query: 430 KKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREP 489
+K +K++ PKRA+ ++FF + + N+ NP I FT++G++LG +W++M+ ++++P
Sbjct: 11 RKLRKQERAWRPKRAIGPYMFFCKDQHANVTADNPSIPFTEIGKILGAQWQQMNEKDKKP 70
Query: 490 YESKARADKKRYKDEI 505
Y ++ DKKRY+ E+
Sbjct: 71 YIKRSEVDKKRYEKEL 86
>gi|403172857|ref|XP_003331993.2| hypothetical protein PGTG_13945 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375170025|gb|EFP87574.2| hypothetical protein PGTG_13945 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 490
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 43/64 (67%)
Query: 427 GKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEE 486
GKKK+ K+++DPNAPKR S +I F R+ ++ +NP + ++ R +G+RWK +S E
Sbjct: 207 GKKKRVKRERDPNAPKRPASAYILFQNAVRQEMRAANPTADYKELARQIGDRWKNLSEEA 266
Query: 487 REPY 490
+ P+
Sbjct: 267 KRPW 270
>gi|344284246|ref|XP_003413879.1| PREDICTED: high mobility group protein 20A [Loxodonta africana]
Length = 347
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
Query: 407 ESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGI 466
ES+ + ++ R G G+K+K K +D NAPK ++G++ F RE ++ P +
Sbjct: 70 ESNEQRHEDEQRSKRGGWSKGRKRK-KPLRDSNAPKSPLTGYVRFMNERREQLRAKRPEV 128
Query: 467 AFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
F ++ R+LG W K+ EE++ Y +A DK+RY E+ Y+
Sbjct: 129 PFPEITRMLGNEWSKLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|56788496|gb|AAW29969.1| unknown [Sus scrofa]
gi|56792880|gb|AAW30632.1| unknown [Sus scrofa]
Length = 193
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%)
Query: 432 QKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYE 491
+KK KDPNAPKR S F F R IK +PG++ DV + LGE W + ++++PYE
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYE 145
Query: 492 SKARADKKRYKDEISGYK 509
A K++Y+ +I+ Y+
Sbjct: 146 KXAAKLKEKYEKDIAAYR 163
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 435 KKDPNAPKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYES 492
K DP P+ MS + FF Q RE KK +P + F++ + ERWK MS +E+ +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 493 KARADKKRYKDEISGYKNPK 512
A+ADK RY+ E+ Y PK
Sbjct: 63 MAKADKARYEREMKTYIPPK 82
>gi|429962227|gb|ELA41771.1| hypothetical protein VICG_01123 [Vittaforma corneae ATCC 50505]
Length = 409
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 104/234 (44%), Gaps = 24/234 (10%)
Query: 90 EAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVV 149
E + GI + PR + + + L+G + D I +S + +F L N ++V
Sbjct: 170 EEICIITGINCINPRSKSTFVFFDDYFVLKGSSYDHTISFSDISEIFFLK--NDSSFYLV 227
Query: 150 VTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFTT 209
+ L+ I +GQT Y +V LL +EL +L+ Y G ++V
Sbjct: 228 LKLENSIVQGQTRYESLVF-----------LLTDKELEVVANDPRLKNHYFGRQYDVLLE 276
Query: 210 ILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDY 269
I+ GL K ++ + K + K DG LY L +S FLPK + + EEI +
Sbjct: 277 IIEGL--------LKIKAQESELFFKCTSKVFDGHLYLLSESLLFLPKSICIPI-EEISH 327
Query: 270 VEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMN 323
VEF R FD+ + + + F IQ++ ++ + + + K +K+++
Sbjct: 328 VEFSRINLSVVQAKTFDMTVH--ASKVYNFSGIQKDAFNQIELYFNEKNIKMVS 379
>gi|324508756|gb|ADY43693.1| FACT complex subunit Ssrp1 [Ascaris suum]
Length = 623
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 113/240 (47%), Gaps = 36/240 (15%)
Query: 90 EAVVTF---EGIAILTPRGRYSVELHLS--FLRLQGQANDFKIQYSSVVRLFLLPKSNQP 144
+A+VT +GI ++P G++ V ++ L+ + I S+ R+F+LP+ N
Sbjct: 97 DALVTLLAADGIIGISPEGKFHVIINKEDIILKSDDGGQQYTIPIDSIGRIFVLPQEN-- 154
Query: 145 HTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPS------ 198
H FV + L + P + + T YVV EL + +E+ +K+++K+E S
Sbjct: 155 HFFVALAL---------IAPLMTADWPTGYVVL-ELPLGKEV--SKFEEKIEKSEQVGDG 202
Query: 199 ----YKGLIHEVFT----TILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEK 250
G I+E T +L LSG K S +V + + G L+PLE
Sbjct: 203 ASGPVSGPINEQLTEAMPRLLSSLSGLDAEKSVLESSPSMLLSVVCTYDGKSGCLFPLED 262
Query: 251 SFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNL 310
FFFL K PT I ++ +F + GS+ DL++ +K F NI++N+++ L
Sbjct: 263 GFFFLHKYPTHIAFSDVFKADF--IDSKGSDKQS-DLVLTMKDSTMVKFCNIEKNDFYRL 319
>gi|330845822|ref|XP_003294767.1| hypothetical protein DICPUDRAFT_73755 [Dictyostelium purpureum]
gi|325074702|gb|EGC28702.1| hypothetical protein DICPUDRAFT_73755 [Dictyostelium purpureum]
Length = 139
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 47/70 (67%)
Query: 439 NAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADK 498
NAP+R +S FIFFS+ R IK NP F ++G +LG++W ++S +E++ YE A+ DK
Sbjct: 50 NAPRRYLSPFIFFSKEYRPTIKAQNPSSTFGEIGSLLGQKWGQISADEKKKYEKMAQEDK 109
Query: 499 KRYKDEISGY 508
KR++ E Y
Sbjct: 110 KRWEIEKKQY 119
>gi|291415754|ref|XP_002724114.1| PREDICTED: high-mobility group box 2-like [Oryctolagus cuniculus]
Length = 234
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR S F F R IK +PG++ D + LGE W + S ++++PYE KA
Sbjct: 115 DPNAPKRPPSAFFLFCSEHRPEIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAK 174
Query: 497 DKKRYKDEISGY 508
K++Y+ +I+ Y
Sbjct: 175 LKEKYEKDIAAY 186
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 435 KKDPNAPKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYES 492
K DPN P+ MS + FF QM RE KK +P I F + + ERWK MS +E+ +E+
Sbjct: 27 KGDPNKPRDKMSSYAFFVQMCREEHKKKHPDSSINFAEFSKKCSERWKTMSAKEKSKFEN 86
Query: 493 KARADKKRYKDEISGYKNP 511
A++DK RY E+ Y P
Sbjct: 87 MAKSDKARYDREMKNYVPP 105
>gi|342866482|gb|EGU72143.1| hypothetical protein FOXB_17387 [Fusarium oxysporum Fo5176]
Length = 486
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 433 KKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYES 492
+ + D NAP+R S ++ FS RE++K N + FT++ +++GE W+ ++ E+E YES
Sbjct: 82 RYQPDENAPERPPSAYVLFSNKMREDLKSQN--LTFTEIAKLVGENWQNLNASEKEAYES 139
Query: 493 KARADKKRYKDEISGYK 509
+A ADK++Y ++ YK
Sbjct: 140 QANADKEKYHRDLMEYK 156
>gi|211929|gb|AAA48819.1| high-mobility group-2 protein [Gallus gallus]
Length = 207
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR S F F R IK +PG++ D + LGE W + S ++++PYE KA
Sbjct: 91 DPNAPKRPPSAFFLFCSEHRPKIKNDHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAK 150
Query: 497 DKKRYKDEISGYK 509
K++Y+ +I+ Y+
Sbjct: 151 LKEKYEKDIAAYR 163
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 435 KKDPNAPKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYES 492
K DPN P+ MS + +F Q KK +P + F + R ERWK MS +E+ +E
Sbjct: 3 KGDPNKPRGKMSSYAYFVQTCPREHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFEE 62
Query: 493 KARADKKRYKDEISGYKNP 511
A+ DK RY E+ Y P
Sbjct: 63 MAKGDKARYDREMKNYVPP 81
>gi|296236823|ref|XP_002763494.1| PREDICTED: high mobility group protein 20A [Callithrix jacchus]
Length = 347
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
Query: 399 PAKKESKKESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMEREN 458
P++ + E + + ++ R G G+K+K K +D NAPK ++G++ F RE
Sbjct: 62 PSESSNAAEGNEQRHEDEQRSKRGGWSKGRKRK-KPLRDSNAPKSPLTGYVRFMNERREQ 120
Query: 459 IKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
++ P + F ++ R+LG W K+ EE++ Y +A DK+RY E+ Y+
Sbjct: 121 LRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|348555623|ref|XP_003463623.1| PREDICTED: high mobility group protein 20A-like [Cavia porcellus]
Length = 347
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
Query: 407 ESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGI 466
ES+ + ++ R G G+K+K K +D NAPK ++G++ F RE ++ P +
Sbjct: 70 ESNEQRHEDEQRSKRGGWSKGRKRK-KPLRDSNAPKSPLTGYVRFMNERREQLRAKRPEV 128
Query: 467 AFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
F ++ R+LG W K+ EE++ Y +A DK+RY E+ Y+
Sbjct: 129 PFPEITRMLGNEWSKLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|449270893|gb|EMC81539.1| High mobility group protein B2 [Columba livia]
Length = 207
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR S F F R IK +PG++ D + LGE W + S ++++PYE KA
Sbjct: 91 DPNAPKRPPSAFFLFCSEHRPKIKNDHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAK 150
Query: 497 DKKRYKDEISGYK 509
K++Y+ +I+ Y+
Sbjct: 151 LKEKYEKDIAAYR 163
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 435 KKDPNAPKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYES 492
K DPN P+ MS + +F Q RE KK +P + F + R ERWK MS +E+ +E
Sbjct: 3 KGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFEE 62
Query: 493 KARADKKRYKDEISGYKNP 511
A+ DK RY E+ Y P
Sbjct: 63 MAKGDKARYDREMKNYVPP 81
>gi|389585513|dbj|GAB68243.1| high mobility group protein [Plasmodium cynomolgi strain B]
Length = 107
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 429 KKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEE 486
+K++K KKDP+APKR++S ++FF++ +R I +P ++ VG+++GE W K+ E
Sbjct: 19 RKRRKNKKDPHAPKRSLSAYMFFAKEKRAEIISRDPDLSKDVATVGKMIGEAWNKLDELE 78
Query: 487 REPYESKARADKKRYKDEISGY 508
+ PYE KA+ DK RY+ E Y
Sbjct: 79 KAPYEKKAQEDKVRYEREKVEY 100
>gi|387016388|gb|AFJ50313.1| High mobility group protein 20A-like [Crotalus adamanteus]
Length = 345
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Query: 405 KKESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNP 464
K E S ++A K R G G+K+K K +D NAPK ++G++ F RE ++ P
Sbjct: 67 KAEQSELRAEEESAK-RGGWSKGRKRK-KPLRDSNAPKSPLTGYVRFMNERREQLRAKRP 124
Query: 465 GIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
+ F ++ R+LG W K+ EE+ Y +A DK+RY E+ Y+
Sbjct: 125 EVPFPEITRMLGNEWSKLPPEEKRRYLDEADRDKERYMKELEQYQ 169
>gi|428671805|gb|EKX72720.1| high mobility group protein, putative [Babesia equi]
Length = 94
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 435 KKDPNAPKRAMSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYES 492
KKDPNAPKRA+S ++FF++ +R I NP +A VGR++G W + +E+ P+E
Sbjct: 17 KKDPNAPKRALSSYMFFAKEKRAEIIAENPELAKDVASVGRLIGAAWNALDEKEKAPFEK 76
Query: 493 KARADKKRYKDEISGY 508
A DK RY+ E + Y
Sbjct: 77 LAEEDKARYEKEKAEY 92
>gi|444730270|gb|ELW70657.1| High mobility group protein 20A [Tupaia chinensis]
Length = 321
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 76/153 (49%), Gaps = 21/153 (13%)
Query: 357 GGDESDEEDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSSVKASTS 416
GG S + +FV D G ++S S+A+E G E+ ++ SK
Sbjct: 40 GGAASSANNPEFVEDLSQGQLLQNES----SNAAE-GSEQRHEDEQRSK----------- 83
Query: 417 KKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLG 476
R G G+K+K K +D NAPK ++G++ F RE ++ P + F ++ R+LG
Sbjct: 84 ----RGGWSKGRKRK-KPLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLG 138
Query: 477 ERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
W K+ EE++ Y +A DK+RY E+ Y+
Sbjct: 139 NEWSKLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|281208001|gb|EFA82179.1| HMG1/2 box-containing protein [Polysphondylium pallidum PN500]
Length = 135
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 48/72 (66%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
D NAP+R +S FIFFS+ R IK NP F ++G +LG+RW+ +S ++++ YE A+
Sbjct: 48 DANAPRRYLSPFIFFSKEYRPTIKAENPKATFGEIGALLGKRWETISADDKKRYEKLAQE 107
Query: 497 DKKRYKDEISGY 508
DKKR++ E Y
Sbjct: 108 DKKRWEMEKKVY 119
>gi|392569066|gb|EIW62240.1| HMG-box [Trametes versicolor FP-101664 SS1]
Length = 259
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 55/92 (59%)
Query: 417 KKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLG 476
KK+ GD++ KK+ KK KDPNAPKR S +I F R ++K NP + ++ +
Sbjct: 74 KKRKARGDDNEAKKRAKKIKDPNAPKRPASSYILFQNDVRSELRKKNPEMRNNELLSHIA 133
Query: 477 ERWKKMSVEEREPYESKARADKKRYKDEISGY 508
+ W +M E++E YE++ R++K R+ E + Y
Sbjct: 134 KLWSEMPQEQKEAYEARNRSEKDRWLAEKAVY 165
>gi|405960935|gb|EKC26804.1| High mobility group protein 20A [Crassostrea gigas]
Length = 341
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 47/74 (63%)
Query: 436 KDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKAR 495
+D NAPK A++G++ F RE +++ NP +AF ++ RVLG W K+ E++ + +A
Sbjct: 95 RDSNAPKPALNGYLHFLNERREILRRENPTMAFAEMIRVLGAEWTKLPQHEKQRFLDEAE 154
Query: 496 ADKKRYKDEISGYK 509
DK+RY E+ Y+
Sbjct: 155 KDKERYNREMEAYQ 168
>gi|443727481|gb|ELU14222.1| hypothetical protein CAPTEDRAFT_191691 [Capitella teleta]
Length = 409
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 41/69 (59%)
Query: 441 PKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKR 500
P+ +G++ F+ R+ IK P +AF D+ ++LG W M EE++ Y S A DKKR
Sbjct: 148 PRAPATGYMLFAYKRRQEIKDIEPKLAFRDITKILGNEWSSMGTEEKQKYLSDAENDKKR 207
Query: 501 YKDEISGYK 509
Y DE+ YK
Sbjct: 208 YIDELDVYK 216
>gi|156097921|ref|XP_001614993.1| high mobility group protein [Plasmodium vivax Sal-1]
gi|148803867|gb|EDL45266.1| high mobility group protein, putative [Plasmodium vivax]
Length = 171
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 67/115 (58%), Gaps = 7/115 (6%)
Query: 405 KKESSSVKASTSKKKSRDGDEDGKKK-----KQKKKKDPNAPKRAMSGFIFFSQMERENI 459
KK++ + T+K+ S +KK ++KKKDP APKRA+S ++F+ + +R +
Sbjct: 55 KKQTQELATVTTKQMSNKMAAKSQKKVLKKQNKRKKKDPLAPKRALSAYMFYVKDKRLEL 114
Query: 460 KKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYKNPK 512
K P +A VG+++GE W ++S ++ PYE KA+ DK RY EI Y+ K
Sbjct: 115 IKERPELAKDVAQVGKLVGEAWGQLSAAQKTPYEKKAQLDKVRYSKEIEEYRKTK 169
>gi|391344136|ref|XP_003746359.1| PREDICTED: high mobility group protein DSP1-like isoform 3
[Metaseiulus occidentalis]
Length = 202
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 49/80 (61%)
Query: 430 KKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREP 489
K +KKKDPNAPKRA+S F F Q ER +K + +V + LG +W+ + E++
Sbjct: 100 KAARKKKDPNAPKRALSAFFHFCQDERPKVKATLGESTVAEVAKELGRKWQDCTDEQKGK 159
Query: 490 YESKARADKKRYKDEISGYK 509
YE A DK+RY+ E++ YK
Sbjct: 160 YEQLAAKDKQRYEREMTAYK 179
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 441 PKRAMSGFIFFSQMERENIKKSNPG--IAFTDVGRVLGERWKKMSVEEREPYESKARADK 498
P+ MS + +F Q RE KK +P + F + + ERWK M+ E++ + A DK
Sbjct: 22 PRGRMSAYAYFVQTCREEHKKKHPNENVVFAEFSKKCAERWKTMNEPEKQRFHLMAAKDK 81
Query: 499 KRYKDEISGY 508
KRY++E+S Y
Sbjct: 82 KRYENEMSTY 91
>gi|389582482|dbj|GAB65220.1| high mobility group protein putative [Plasmodium cynomolgi strain
B]
Length = 194
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKA 494
DP APKRA+S ++F+ + +R + K P +A VG+++GE W K+S ++ PYE KA
Sbjct: 115 DPLAPKRALSAYMFYVKDKRLELIKERPELAKDVAQVGKLVGEAWGKLSAAQKTPYEKKA 174
Query: 495 RADKKRYKDEISGYKNPK 512
+ DK RY EI Y+ K
Sbjct: 175 QLDKVRYSKEIEEYRKTK 192
>gi|157822803|ref|NP_001101620.1| high mobility group protein 20A [Rattus norvegicus]
gi|149041741|gb|EDL95582.1| high mobility group 20A (predicted) [Rattus norvegicus]
Length = 347
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
Query: 407 ESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGI 466
E S + ++ R G G+K+K K +D NAPK ++G++ F RE ++ P +
Sbjct: 70 EGSEQRPEDEQRSKRGGWSKGRKRK-KPLRDSNAPKSPLTGYVRFMNERREQLRAKRPEV 128
Query: 467 AFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
F ++ R+LG W K+ EE++ Y +A DK+RY E+ Y+
Sbjct: 129 PFPEITRMLGNEWSKLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|296200444|ref|XP_002747606.1| PREDICTED: high mobility group protein B1-like isoform 2
[Callithrix jacchus]
Length = 210
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 48/77 (62%)
Query: 432 QKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYE 491
+KK KDP+APKR S F F R IK +PG++ DV + LGE W + ++++PYE
Sbjct: 86 KKKFKDPSAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYE 145
Query: 492 SKARADKKRYKDEISGY 508
KA K++Y+ +I+ Y
Sbjct: 146 KKASKLKEKYEKDIAAY 162
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 435 KKDPNAPKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYES 492
K DP + MS + FF Q RE KK +P + F++ + ERWK MS +E+ +E
Sbjct: 3 KGDPKKLRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 493 KARADKKRYKDEISGYKNPK 512
A+ADK RY+ E+ Y PK
Sbjct: 63 MAKADKVRYEREMKTYIPPK 82
>gi|336373128|gb|EGO01466.1| hypothetical protein SERLA73DRAFT_131740 [Serpula lacrymans var.
lacrymans S7.3]
Length = 165
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 417 KKKSRDGDEDGKKKKQ-KKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVL 475
K+K+RD D DG K+K+ K KDPNAPKR S +I F R +K+ NP + +++ ++
Sbjct: 71 KRKARDDDGDGTKRKRVTKPKDPNAPKRPASAYILFQNEVRAKLKEQNPELPQSELLSLI 130
Query: 476 GERWKKMSVEERE 488
G RW MS +E+E
Sbjct: 131 GRRWTSMSQQEKE 143
>gi|148693919|gb|EDL25866.1| high mobility group 20A, isoform CRA_b [Mus musculus]
Length = 370
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 55/93 (59%)
Query: 417 KKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLG 476
+++S+ G +K++K +D NAPK ++G++ F RE ++ P + F ++ R+LG
Sbjct: 102 EQRSKRGGWSKGRKRKKPLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLG 161
Query: 477 ERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
W K+ EE++ Y +A DK+RY E+ Y+
Sbjct: 162 NEWSKLPPEEKQRYLDEADRDKERYMKELEQYQ 194
>gi|395822564|ref|XP_003784587.1| PREDICTED: high mobility group protein 20A [Otolemur garnettii]
Length = 347
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
Query: 407 ESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGI 466
E S + ++ R G G+K+K K +D NAPK ++G++ F RE ++ P +
Sbjct: 70 EGSEPRHEDEQRSKRGGWSKGRKRK-KPLRDSNAPKSPLTGYVRFMNERREQLRAKRPEV 128
Query: 467 AFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
F ++ R+LG W K+ EE++ Y +A DK+RY E+ Y+
Sbjct: 129 PFPEITRMLGNEWSKLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|159478601|ref|XP_001697391.1| high mobility group protein [Chlamydomonas reinhardtii]
gi|158274549|gb|EDP00331.1| high mobility group protein [Chlamydomonas reinhardtii]
Length = 99
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 47/73 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPK+ M +++F + RE +K NP + TD+GR LGE WK+ ++++ ++ A
Sbjct: 18 DPNAPKKPMGAYMWFCKEMREQVKADNPEFSVTDIGRRLGELWKECEDDDKKKFQDLADK 77
Query: 497 DKKRYKDEISGYK 509
DK+RY E + Y+
Sbjct: 78 DKERYNKENAAYQ 90
>gi|170784871|ref|NP_001116308.1| wu:fk52f12 [Danio rerio]
Length = 213
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 60/120 (50%), Gaps = 13/120 (10%)
Query: 404 SKKESSSVKASTSKKKSRDGDEDGKKK-------------KQKKKKDPNAPKRAMSGFIF 450
SK+ S KA T K+KSR D + K K+ KKKDPNAPKR SGF
Sbjct: 42 SKRCSGRWKAMTDKEKSRFEDMAKQDKVRYDQEMMHYMPGKRGKKKDPNAPKRPPSGFFL 101
Query: 451 FSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYKN 510
F R IK P + DV + LGE W ++ ++P+ KA K +Y+ +++ YK
Sbjct: 102 FCSEHRPQIKAQYPSLGIGDVAKKLGEMWNGLTDANKQPFLMKANKLKDKYQKDVADYKT 161
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 435 KKDPNAPKRAMSGFIFFSQMERENIKKSNPGI--AFTDVGRVLGERWKKMSVEEREPYES 492
K DP PK MS + +F Q RE KK +P I +F++ + RWK M+ +E+ +E
Sbjct: 3 KGDPRKPKGKMSAYAYFVQTCREEHKKKSPEIPVSFSEFSKRCSGRWKAMTDKEKSRFED 62
Query: 493 KARADKKRYKDEISGY 508
A+ DK RY E+ Y
Sbjct: 63 MAKQDKVRYDQEMMHY 78
>gi|291228966|ref|XP_002734443.1| PREDICTED: structure specific recognition protein 1-like
[Saccoglossus kowalevskii]
Length = 226
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 11/111 (9%)
Query: 2 LTFMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQ 61
++F V K AF + L +VS + KN+V +EFH +D SLME+ F +P +
Sbjct: 119 MSFEVDNKAAFHIPLNNVSHSTTT-KNEVTVEFHQNDDADV----SLMEMRFFLPTT--- 170
Query: 62 FVGDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELH 112
D + P + F K+++ AD+ +A+ TF I LTPRGRY ++++
Sbjct: 171 ---DPDVDPVEDFHQKVLAKADIIQATGDAIATFTEIPCLTPRGRYDIKIY 218
>gi|171848939|pdb|2YQI|A Chain A, Solution Structure Of The Second Hmg-Box Domain From High
Mobility Group Protein B3
Length = 81
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%)
Query: 439 NAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADK 498
NAPKR SGF F R IK +NPGI+ DV + LGE W ++ E++PY +KA K
Sbjct: 8 NAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKLK 67
Query: 499 KRYKDEISGYKN 510
++Y+ +++ YK+
Sbjct: 68 EKYEKDVADYKS 79
>gi|351694875|gb|EHA97793.1| High mobility group protein 20A [Heterocephalus glaber]
Length = 347
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
Query: 407 ESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGI 466
E S + ++ R G G+K+K K +D NAPK ++G++ F RE ++ P +
Sbjct: 70 EGSEQRHEDEQRSKRGGWSKGRKRK-KPLRDSNAPKSPLTGYVRFMNERREQLRAKRPEV 128
Query: 467 AFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
F ++ R+LG W K+ EE++ Y +A DK+RY E+ Y+
Sbjct: 129 PFPEITRMLGNEWSKLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|396458124|ref|XP_003833675.1| hypothetical protein LEMA_P064360.1 [Leptosphaeria maculans JN3]
gi|312210223|emb|CBX90310.1| hypothetical protein LEMA_P064360.1 [Leptosphaeria maculans JN3]
Length = 652
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 27/163 (16%)
Query: 349 LERIKNEAGGDESDEEDSDFVADKD--DGGSPTDDSGEEDSDASESGGEKEKPAKKESKK 406
L+R E+ G SD VA D +DDSG E +S++
Sbjct: 196 LQRAIAESRGQSSDRPLPPPVARAASLDRSYRSDDSGPES----------------KSRQ 239
Query: 407 ESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGI 466
SV ++ G +K ++ K D +AP+R S ++ FS RE++K + +
Sbjct: 240 GEPSVTGTS-------GTSTKRKYRRHPKPDEHAPERPPSAYVIFSNQVRESLKGQD--L 290
Query: 467 AFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
+FT++ +V+GERW+ + EERE E +A K++Y E++ YK
Sbjct: 291 SFTEIAKVVGERWQVLPAEEREGCERQANGAKEKYYAELAEYK 333
>gi|213515010|ref|NP_001133971.1| High mobility group protein B3 [Salmo salar]
gi|209156012|gb|ACI34238.1| High mobility group protein B3 [Salmo salar]
gi|223648118|gb|ACN10817.1| High mobility group protein B3 [Salmo salar]
Length = 206
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 49/82 (59%)
Query: 431 KQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPY 490
K+ +KKDPNAPKR SGF F R IK +P + DV + LGE+W ++ ++PY
Sbjct: 83 KKGRKKDPNAPKRPSSGFFIFCADHRPKIKAQHPSLGIGDVAKKLGEQWNNLTDATKQPY 142
Query: 491 ESKARADKKRYKDEISGYKNPK 512
KA K +Y+ +++ YK+ K
Sbjct: 143 LIKANKLKDKYQKDVADYKSGK 164
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 438 PNAPKRAMSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKAR 495
P PK MS + +F Q RE KK P I F + + RWK MS +E+ ++ A+
Sbjct: 6 PGKPKGKMSSYAYFVQTCREEHKKKTPEIPVNFAEFSKKCSGRWKTMSGKEKGKFDDMAK 65
Query: 496 ADKKRYKDEI 505
DK RY +E+
Sbjct: 66 QDKVRYDNEM 75
>gi|196003770|ref|XP_002111752.1| hypothetical protein TRIADDRAFT_23407 [Trichoplax adhaerens]
gi|190585651|gb|EDV25719.1| hypothetical protein TRIADDRAFT_23407, partial [Trichoplax
adhaerens]
Length = 257
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 50/82 (60%)
Query: 427 GKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEE 486
G+K+K+ KD NAPK +G++ F RE ++ NP + F+++ ++LG +W + + E
Sbjct: 2 GRKRKRFSSKDSNAPKAPHTGYVRFLNDSREKVRAENPDLPFSEITKILGTKWSSLPISE 61
Query: 487 REPYESKARADKKRYKDEISGY 508
++ Y +A DK+RY E+ Y
Sbjct: 62 KQRYLDEAEKDKERYLKELEDY 83
>gi|424513152|emb|CCO66736.1| predicted protein [Bathycoccus prasinos]
Length = 486
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 55/87 (63%)
Query: 431 KQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPY 490
K+K++KDPNAPK+ + +++F++ ER I + +P + D+ LG RWK +S + R+PY
Sbjct: 283 KKKRRKDPNAPKQVKTAYLYFAEKERMKIVQQSPDMRPPDIMAELGVRWKALSEKNRKPY 342
Query: 491 ESKARADKKRYKDEISGYKNPKPMDID 517
E A DK R+ +++ Y+ + D D
Sbjct: 343 EKIAEKDKLRHDEQMKSYQPSEGYDRD 369
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 426 DGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVE 485
D ++K+++ KK+ PK A S +++F ++ R +I + G + ++LG +W+++S E
Sbjct: 382 DDERKRKRPKKEAGQPKNARSAYVYFCEVSRPSI--APKGTHPAETMKLLGRKWQRLSEE 439
Query: 486 EREPYESKARADKKRYKDEISGYKNPK 512
+R+P+E+K DK RY+ E+ ++ K
Sbjct: 440 DRKPFEAKHEKDKARYEIEMKEWREGK 466
>gi|403295522|ref|XP_003938690.1| PREDICTED: high mobility group protein B3-like [Saimiri boliviensis
boliviensis]
Length = 202
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 47/74 (63%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNA KR SGF F R IK +NPGI+ DV + LGE W ++ E++PY +KA
Sbjct: 89 DPNASKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAK 148
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ YK+
Sbjct: 149 LKEKYEKDVADYKS 162
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 435 KKDPNAPKRAMSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYES 492
K DP PK MS + FF Q RE KK NP + F + + ERWK MS +E+ ++
Sbjct: 3 KCDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDE 62
Query: 493 KARADKKRYKDEISGY 508
A+ADK RY E+ Y
Sbjct: 63 MAKADKVRYDREMKDY 78
>gi|355563197|gb|EHH19759.1| hypothetical protein EGK_02478, partial [Macaca mulatta]
Length = 121
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 434 KKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESK 493
K DPNAPKR +SGF F +K +NPGI+ DV + LGE WK ++ E++PY +K
Sbjct: 23 KNNDPNAPKRPLSGFFLFCSEFHPKMKSTNPGISIGDVAKKLGEMWKNLNDSEKQPYVTK 82
Query: 494 ARADKKRYKDEISGYKNPKPMDIDSG 519
A +Y+ +++ YK+ +D G
Sbjct: 83 V-AKLMKYEKDVADYKSKGKLDGAKG 107
>gi|291399740|ref|XP_002716281.1| PREDICTED: high-mobility group box 1 [Oryctolagus cuniculus]
Length = 243
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%)
Query: 432 QKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYE 491
+KK KDPNAPKR S F F R IK +PG++ DV + LGE W + ++++PYE
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYE 145
Query: 492 SKARADKKRYKDEISGYK 509
KA K +Y+ + + Y+
Sbjct: 146 RKAAKLKGKYEKDTAAYR 163
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 435 KKDPNAPKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYES 492
K D P+ MS + FF Q RE KK +P + F++ + ERWK MS +E+ +E
Sbjct: 3 KGDRKKPRGKMSSYAFFVQTCREEHKKRHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 493 KARADKKRYKDEISGYKNPK 512
A+ADK RY+ E+ Y PK
Sbjct: 63 MAKADKARYEREMKTYIPPK 82
>gi|384493812|gb|EIE84303.1| hypothetical protein RO3G_09013 [Rhizopus delemar RA 99-880]
Length = 252
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 50/80 (62%)
Query: 429 KKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEERE 488
K K K+K+DP+ PK+ S ++F+ R ++ K P +F + ++ GERWKK+S E++
Sbjct: 49 KDKGKRKRDPDFPKQPTSNYLFYCNSIRADVDKEFPSASFVEKSKIYGERWKKLSDAEKK 108
Query: 489 PYESKARADKKRYKDEISGY 508
PY A+ +K+RY E+ Y
Sbjct: 109 PYNEMAQKEKERYNRELETY 128
>gi|443710428|gb|ELU04681.1| hypothetical protein CAPTEDRAFT_155070 [Capitella teleta]
Length = 269
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 49/81 (60%)
Query: 428 KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEER 487
K +K+K+ D NAPK+ ++G++ F RE I++ NP FT++ + LG W K+ E+
Sbjct: 13 KGRKRKRVHDANAPKQPLTGYVRFLSDRREQIREENPSATFTEITKRLGAEWSKLPPMEK 72
Query: 488 EPYESKARADKKRYKDEISGY 508
+ Y +A DK+RY E+ Y
Sbjct: 73 QRYLDEAERDKERYLKELEAY 93
>gi|441639466|ref|XP_004090212.1| PREDICTED: high mobility group protein B3-like [Nomascus
leucogenys]
Length = 131
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAP+R +SGF F IK +NPGI+ DV + LGE W ++ E++PY +K A
Sbjct: 27 DPNAPQRPLSGFFLFCSEFCPEIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVTKV-A 85
Query: 497 DKKRYKDEISGYKNPKPMDIDSG 519
K+Y+ +++ YK+ +D G
Sbjct: 86 KLKKYEKDVADYKSKGKLDNAKG 108
>gi|432116515|gb|ELK37328.1| High mobility group protein 20A [Myotis davidii]
Length = 347
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
Query: 407 ESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGI 466
E S + ++ R G G+K+K K +D NAPK ++G++ F RE ++ P +
Sbjct: 70 EGSEQRHEDEQRSKRGGWSKGRKRK-KPLRDSNAPKSPLTGYVRFMNERREQLRAKRPEV 128
Query: 467 AFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
F ++ R+LG W K+ EE++ Y +A DK+RY E+ Y+
Sbjct: 129 PFPEITRMLGNEWSKLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|380471591|emb|CCF47205.1| HMG box protein [Colletotrichum higginsianum]
Length = 513
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
Query: 428 KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEER 487
+K ++ K D NAP+R S ++ FS R+++K N + FT++ +++GE W+ ++ E+
Sbjct: 103 RKYRRHPKPDENAPERPPSAYVLFSNKMRDDLKGRN--LTFTEIAKLVGEHWQNLTPGEK 160
Query: 488 EPYESKARADKKRYKDEISGYK 509
EPYES A K++Y +++ YK
Sbjct: 161 EPYESSALKAKEKYNHDLAEYK 182
>gi|260820323|ref|XP_002605484.1| hypothetical protein BRAFLDRAFT_126796 [Branchiostoma floridae]
gi|229290818|gb|EEN61494.1| hypothetical protein BRAFLDRAFT_126796 [Branchiostoma floridae]
Length = 375
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 46/74 (62%)
Query: 436 KDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKAR 495
KD NAPK ++G++ F RE +++ NP + F ++ R+LG W K++ E++ Y +A
Sbjct: 120 KDVNAPKAPLTGYVRFLNERREKMRQDNPNVPFPEITRMLGNEWSKLAPHEKQQYLDEAE 179
Query: 496 ADKKRYKDEISGYK 509
DK+RY E+ Y+
Sbjct: 180 KDKERYMKELEEYQ 193
>gi|410908083|ref|XP_003967520.1| PREDICTED: high mobility group protein 20A-like [Takifugu rubripes]
Length = 291
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%)
Query: 419 KSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGER 478
K R G +K++K KD NAPK ++G++ F RE ++ P + F ++ R+LG
Sbjct: 23 KPRRGSWTKGRKRKKPMKDSNAPKAPLTGYVRFMNDRREQLRAERPDVPFPEITRMLGNE 82
Query: 479 WKKMSVEEREPYESKARADKKRYKDEISGYK 509
W K+ EE++ Y +A DK+RY E+ Y+
Sbjct: 83 WSKLPPEEKQRYLDEAERDKERYMRELEKYQ 113
>gi|426248262|ref|XP_004017883.1| PREDICTED: high mobility group protein 20A [Ovis aries]
Length = 347
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
Query: 407 ESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGI 466
E S + ++ R G G+K+K K +D NAPK ++G++ F RE ++ P +
Sbjct: 70 EGSEQRHEDEQRSKRGGWSKGRKRK-KPLRDSNAPKSPLTGYVRFMNERREQLRAKRPEV 128
Query: 467 AFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
F ++ R+LG W K+ EE++ Y +A DK+RY E+ Y+
Sbjct: 129 PFPEITRMLGNEWSKLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|74000793|ref|XP_853367.1| PREDICTED: high mobility group protein 20A isoform 2 [Canis lupus
familiaris]
Length = 347
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 55/93 (59%)
Query: 417 KKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLG 476
+++S+ G +K++K +D NAPK ++G++ F RE ++ P + F ++ R+LG
Sbjct: 79 EQRSKRGGWSKGRKRKKPLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLG 138
Query: 477 ERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
W K+ EE++ Y +A DK+RY E+ Y+
Sbjct: 139 NEWSKLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|335774950|gb|AEH58410.1| high mobility group protein 20A-like protein [Equus caballus]
Length = 347
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 55/93 (59%)
Query: 417 KKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLG 476
+++S+ G +K++K +D NAPK ++G++ F RE ++ P + F ++ R+LG
Sbjct: 79 EQRSKRGGWSKGRKRKKPLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLG 138
Query: 477 ERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
W K+ EE++ Y +A DK+RY E+ Y+
Sbjct: 139 NEWSKLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|410960786|ref|XP_003986968.1| PREDICTED: high mobility group protein 20A [Felis catus]
Length = 347
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 418 KKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGE 477
+ R G G+K+K K +D NAPK ++G++ F RE ++ P + F ++ R+LG
Sbjct: 81 RAQRRGWSKGRKRK-KPLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGN 139
Query: 478 RWKKMSVEEREPYESKARADKKRYKDEISGYK 509
W K+ EE++ Y +A DK+RY E+ Y+
Sbjct: 140 EWSKLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|395501084|ref|XP_003754928.1| PREDICTED: high mobility group protein 20A [Sarcophilus harrisii]
Length = 347
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 417 KKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLG 476
++ R G G+K+K K +D NAPK ++G++ F RE ++ P + F ++ R+LG
Sbjct: 80 QRNKRGGWSKGRKRK-KPLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLG 138
Query: 477 ERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
W K+ EE++ Y +A DK+RY E+ Y+
Sbjct: 139 NEWSKLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|355694827|gb|AER99798.1| high-mobility group 20A [Mustela putorius furo]
Length = 349
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 55/93 (59%)
Query: 417 KKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLG 476
+++S+ G +K++K +D NAPK ++G++ F RE ++ P + F ++ R+LG
Sbjct: 79 EQRSKRGGWSKGRKRKKPLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLG 138
Query: 477 ERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
W K+ EE++ Y +A DK+RY E+ Y+
Sbjct: 139 NEWSKLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|386783903|gb|AFJ24846.1| high mobility group-1 [Schmidtea mediterranea]
Length = 192
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 430 KKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREP 489
K ++K KDPN PK A + F FFS R+ IK+ NP DV +VLG+ W+ + +++
Sbjct: 82 KNKRKIKDPNKPKGAWTAFFFFSDEHRKKIKEENPEYKVGDVAKVLGKMWE--ACKDKSK 139
Query: 490 YESKARADKKRYKDEISGYKNPKPM 514
YE +A+ DK+RY E+ YK+ P+
Sbjct: 140 YEEQAKRDKERYNKELEEYKSGTPV 164
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 441 PKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESKARADK 498
PK A + + F Q+ RE KK +P I F++ + E+WK+MS +E++ + A DK
Sbjct: 6 PKGAKTPYACFVQVVREEHKKKHPDEQIVFSEFSKRCSEKWKEMSPKEKQRFMDIAAKDK 65
Query: 499 KRYKDEISGYKNP 511
+RY E+ Y+ P
Sbjct: 66 ERYLKEMDNYQPP 78
>gi|301779535|ref|XP_002925179.1| PREDICTED: high mobility group protein 20A-like [Ailuropoda
melanoleuca]
gi|281343408|gb|EFB18992.1| hypothetical protein PANDA_014629 [Ailuropoda melanoleuca]
Length = 347
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 417 KKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLG 476
++ R G G+K+K K +D NAPK ++G++ F RE ++ P + F ++ R+LG
Sbjct: 80 QRSKRGGWSKGRKRK-KPLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLG 138
Query: 477 ERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
W K+ EE++ Y +A DK+RY E+ Y+
Sbjct: 139 NEWSKLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|444515932|gb|ELV11007.1| High mobility group protein B3 [Tupaia chinensis]
Length = 212
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 46/74 (62%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAP+R SGF+ F IK +NPGI+ DV + L E W S E++PY +KA
Sbjct: 89 DPNAPERPPSGFLLFCSEFHLKIKSTNPGISIGDVAKKLVEMWNNFSDSEKQPYITKAAK 148
Query: 497 DKKRYKDEISGYKN 510
K++YK +++ YK+
Sbjct: 149 LKEKYKKDVANYKS 162
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 435 KKDPNAPKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYES 492
K DP PK +S + FF Q RE KK NP I FT+ + +RWK MS +E+ ++
Sbjct: 3 KSDPKKPKGKVSTYAFFVQTCREEHKKKNPEVPINFTEFSKKCSKRWKTMSGKEKSKFDE 62
Query: 493 KARADKKRYKDEISGY 508
A+ADK RY E+ Y
Sbjct: 63 MAKADKIRYDWEMKDY 78
>gi|384491642|gb|EIE82838.1| hypothetical protein RO3G_07543 [Rhizopus delemar RA 99-880]
Length = 280
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 61/113 (53%), Gaps = 12/113 (10%)
Query: 407 ESSSVKASTSKKKSRDGDEDG----------KKKKQKKKKDPNAPKRAMSGFIFFSQMER 456
+S++VK + S K S D D++ +K K+ K DPNAP + S ++ FS R
Sbjct: 93 DSNTVKETNSGKTSFDEDDENSDQSSNNGYIRKYKRHPKPDPNAPAKPPSAYVMFSNTAR 152
Query: 457 ENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
+K N ++F+D+ +++G+RWK + E++ YE A K Y D + YK
Sbjct: 153 AQLKDHN--LSFSDIAKIVGDRWKNLCAREKQLYERNAMRAKDEYMDAFNKYK 203
>gi|229367846|gb|ACQ58903.1| High mobility group protein B2 [Anoplopoma fimbria]
Length = 213
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR S F F R IK+ NPGI+ D+ + LGE W + +++ PYE++A
Sbjct: 92 DPNAPKRPPSAFFVFCSDHRPRIKEENPGISIGDIAKKLGEFWSTQTSKDKVPYEARAGK 151
Query: 497 DKKRYKDEISGYK 509
K++Y+ +++ YK
Sbjct: 152 LKEKYEKDVAAYK 164
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 436 KDPNAPKRAMSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESK 493
KDPN P+ S + FF RE KK +PG++ F + + ERWK MS +E+ +E
Sbjct: 3 KDPNKPRGKTSSYAFFVATCREEHKKKHPGVSVGFAEFSKKCSERWKTMSAKEKVKFEDL 62
Query: 494 ARADKKRYKDEISGY 508
A+ DK RY+ E+ Y
Sbjct: 63 AKNDKVRYEREMKTY 77
>gi|30584799|gb|AAP36652.1| Homo sapiens high-mobility group 20A [synthetic construct]
gi|61370777|gb|AAX43550.1| high-mobility group 20A [synthetic construct]
gi|61370782|gb|AAX43551.1| high-mobility group 20A [synthetic construct]
Length = 348
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 55/93 (59%)
Query: 417 KKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLG 476
+++S+ G +K++K +D NAPK ++G++ F RE ++ P + F ++ R+LG
Sbjct: 79 EQRSKRGGWSKGRKRKKPLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLG 138
Query: 477 ERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
W K+ EE++ Y +A DK+RY E+ Y+
Sbjct: 139 NEWSKLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|42572635|ref|NP_974413.1| high mobility group protein B1 [Arabidopsis thaliana]
gi|222423104|dbj|BAH19531.1| AT3G51880 [Arabidopsis thaliana]
gi|332645335|gb|AEE78856.1| high mobility group protein B1 [Arabidopsis thaliana]
Length = 185
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 429 KKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGI-AFTDVGRVLGERWKKMSVEER 487
+K++K KKDPN PKRA S F F + R KK NP + A + VG+ G++WK MS E+
Sbjct: 41 RKEKKAKKDPNKPKRAPSAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEK 100
Query: 488 EPYESKARADKKRYKDEISGY 508
PYE KA K Y+ ++ Y
Sbjct: 101 APYEEKAAKRKAEYEKQMDAY 121
>gi|403224276|dbj|BAM42406.1| structure-specific recognition protein 1 [Theileria orientalis
strain Shintoku]
Length = 309
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 71/151 (47%), Gaps = 14/151 (9%)
Query: 6 VGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFVGD 65
+ ++ ++Q + K D+ +E + T D L+EI F +P G
Sbjct: 141 INNSSGIDIDTKSIAQATIPSKTDLAIELKTNSTVF--NSDDLVEIRFCVP-------GK 191
Query: 66 ENHPPAQV----FRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQ 121
+ A++ + + + + E + + ++ PRGRY +E ++L G+
Sbjct: 192 TDPEDAEIQLEDLKQTFLMKSGLDEMKSEKIALLMDVPLIVPRGRYEIEFTKRSIKLHGK 251
Query: 122 ANDFKIQYSSVVRLFLLPKSNQPHT-FVVVT 151
+ D+ + YS+V+R+FLLPK N PH F++ T
Sbjct: 252 SYDYTLLYSNVIRMFLLPKPNSPHVNFILAT 282
>gi|15022805|ref|NP_080088.1| high mobility group protein 20A [Mus musculus]
gi|81917204|sp|Q9DC33.1|HM20A_MOUSE RecName: Full=High mobility group protein 20A; AltName: Full=HMG
box-containing protein 20A; AltName: Full=HMG
domain-containing protein HMGX1; AltName: Full=Inhibitor
of BRAF35; Short=iBRAF
gi|12835873|dbj|BAB23397.1| unnamed protein product [Mus musculus]
gi|15489430|gb|AAH13804.1| High mobility group 20A [Mus musculus]
gi|74140901|dbj|BAE22054.1| unnamed protein product [Mus musculus]
gi|148693918|gb|EDL25865.1| high mobility group 20A, isoform CRA_a [Mus musculus]
Length = 346
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 55/93 (59%)
Query: 417 KKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLG 476
+++S+ G +K++K +D NAPK ++G++ F RE ++ P + F ++ R+LG
Sbjct: 78 EQRSKRGGWSKGRKRKKPLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLG 137
Query: 477 ERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
W K+ EE++ Y +A DK+RY E+ Y+
Sbjct: 138 NEWSKLPPEEKQRYLDEADRDKERYMKELEQYQ 170
>gi|431893641|gb|ELK03462.1| High mobility group protein 20A [Pteropus alecto]
Length = 367
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 55/93 (59%)
Query: 417 KKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLG 476
+++S+ G +K++K +D NAPK ++G++ F RE ++ P + F ++ R+LG
Sbjct: 99 EQRSKRGGWSKGRKRKKPLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLG 158
Query: 477 ERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
W K+ EE++ Y +A DK+RY E+ Y+
Sbjct: 159 NEWSKLPPEEKQRYLDEADRDKERYMKELEQYQ 191
>gi|350586820|ref|XP_003482285.1| PREDICTED: high mobility group protein 20A [Sus scrofa]
gi|350596463|ref|XP_003484278.1| PREDICTED: high mobility group protein 20A-like [Sus scrofa]
Length = 347
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 55/93 (59%)
Query: 417 KKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLG 476
+++S+ G +K++K +D NAPK ++G++ F RE ++ P + F ++ R+LG
Sbjct: 79 EQRSKRGGWSKGRKRKKPLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLG 138
Query: 477 ERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
W K+ EE++ Y +A DK+RY E+ Y+
Sbjct: 139 NEWSKLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|354471461|ref|XP_003497961.1| PREDICTED: high mobility group protein 20A-like [Cricetulus
griseus]
gi|344247669|gb|EGW03773.1| High mobility group protein 20A [Cricetulus griseus]
Length = 347
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 55/93 (59%)
Query: 417 KKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLG 476
+++S+ G +K++K +D NAPK ++G++ F RE ++ P + F ++ R+LG
Sbjct: 79 EQRSKRGGWSKGRKRKKPLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLG 138
Query: 477 ERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
W K+ EE++ Y +A DK+RY E+ Y+
Sbjct: 139 NEWSKLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|297697200|ref|XP_002825755.1| PREDICTED: high mobility group protein 20A isoform 1 [Pongo abelii]
gi|332252689|ref|XP_003275487.1| PREDICTED: high mobility group protein 20A [Nomascus leucogenys]
Length = 347
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 417 KKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLG 476
++ R G G+K+K K +D NAPK ++G++ F RE ++ P + F ++ R+LG
Sbjct: 80 QRSKRGGWSKGRKRK-KPLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLG 138
Query: 477 ERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
W K+ EE++ Y +A DK+RY E+ Y+
Sbjct: 139 NEWSKLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|12857100|dbj|BAB30892.1| unnamed protein product [Mus musculus]
Length = 346
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 55/93 (59%)
Query: 417 KKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLG 476
+++S+ G +K++K +D NAPK ++G++ F RE ++ P + F ++ R+LG
Sbjct: 78 EQRSKRGGWSKGRKRKKPLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLG 137
Query: 477 ERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
W K+ EE++ Y +A DK+RY E+ Y+
Sbjct: 138 NEWSKLPPEEKQRYLDEADRDKERYMKELEQYQ 170
>gi|451852563|gb|EMD65858.1| hypothetical protein COCSADRAFT_180514 [Cochliobolus sativus
ND90Pr]
Length = 366
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 56/86 (65%), Gaps = 3/86 (3%)
Query: 428 KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEER 487
+K + K D +AP R +S ++ F+ RE++K G++FT++ +V+G+RW+ + E R
Sbjct: 75 RKYARHPKSDEHAPGRPLSAYVIFANHVRESLKGQ--GLSFTEIAKVVGKRWQVLPAEAR 132
Query: 488 EPYESKARADKKRYKDEISGYK-NPK 512
E Y+ +A+ K++Y E++ YK +PK
Sbjct: 133 EAYQCQAKVGKEKYHAELAEYKGSPK 158
>gi|114658303|ref|XP_510687.2| PREDICTED: high mobility group protein 20A isoform 2 [Pan
troglodytes]
gi|410296376|gb|JAA26788.1| high mobility group 20A [Pan troglodytes]
gi|410296378|gb|JAA26789.1| high mobility group 20A [Pan troglodytes]
gi|410352811|gb|JAA43009.1| high mobility group 20A [Pan troglodytes]
gi|410352813|gb|JAA43010.1| high mobility group 20A [Pan troglodytes]
Length = 347
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 417 KKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLG 476
++ R G G+K+K K +D NAPK ++G++ F RE ++ P + F ++ R+LG
Sbjct: 80 QRSKRGGWSKGRKRK-KPLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLG 138
Query: 477 ERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
W K+ EE++ Y +A DK+RY E+ Y+
Sbjct: 139 NEWSKLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|8922633|ref|NP_060670.1| high mobility group protein 20A [Homo sapiens]
gi|387763258|ref|NP_001248493.1| high mobility group protein 20A [Macaca mulatta]
gi|397479766|ref|XP_003811178.1| PREDICTED: high mobility group protein 20A isoform 1 [Pan paniscus]
gi|397479768|ref|XP_003811179.1| PREDICTED: high mobility group protein 20A isoform 2 [Pan paniscus]
gi|402874986|ref|XP_003901303.1| PREDICTED: high mobility group protein 20A isoform 1 [Papio anubis]
gi|402874988|ref|XP_003901304.1| PREDICTED: high mobility group protein 20A isoform 2 [Papio anubis]
gi|74734297|sp|Q9NP66.1|HM20A_HUMAN RecName: Full=High mobility group protein 20A; AltName: Full=HMG
box-containing protein 20A; AltName: Full=HMG
domain-containing protein 1; AltName: Full=HMG
domain-containing protein HMGX1
gi|7673025|gb|AAF66706.1|AF146222_1 HMG domain protein HMGX1 [Homo sapiens]
gi|7022956|dbj|BAA91782.1| unnamed protein product [Homo sapiens]
gi|7799126|emb|CAB90816.1| HMG20A [Homo sapiens]
gi|18314393|gb|AAH21959.1| High-mobility group 20A [Homo sapiens]
gi|30582271|gb|AAP35362.1| high-mobility group 20A [Homo sapiens]
gi|61361068|gb|AAX41984.1| high-mobility group 20A [synthetic construct]
gi|61361075|gb|AAX41985.1| high-mobility group 20A [synthetic construct]
gi|119619607|gb|EAW99201.1| high-mobility group 20A, isoform CRA_a [Homo sapiens]
gi|119619608|gb|EAW99202.1| high-mobility group 20A, isoform CRA_a [Homo sapiens]
gi|119619609|gb|EAW99203.1| high-mobility group 20A, isoform CRA_a [Homo sapiens]
gi|208966460|dbj|BAG73244.1| high-mobility group 20A protein [synthetic construct]
gi|355692904|gb|EHH27507.1| HMG box-containing protein 20A [Macaca mulatta]
gi|355778214|gb|EHH63250.1| HMG box-containing protein 20A [Macaca fascicularis]
gi|380784973|gb|AFE64362.1| high mobility group protein 20A [Macaca mulatta]
gi|383413847|gb|AFH30137.1| high mobility group protein 20A [Macaca mulatta]
gi|384942166|gb|AFI34688.1| high mobility group protein 20A [Macaca mulatta]
Length = 347
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 55/93 (59%)
Query: 417 KKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLG 476
+++S+ G +K++K +D NAPK ++G++ F RE ++ P + F ++ R+LG
Sbjct: 79 EQRSKRGGWSKGRKRKKPLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLG 138
Query: 477 ERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
W K+ EE++ Y +A DK+RY E+ Y+
Sbjct: 139 NEWSKLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|170575732|ref|XP_001893362.1| high mobility group protein [Brugia malayi]
gi|312082913|ref|XP_003143642.1| high mobility group protein [Loa loa]
gi|158600692|gb|EDP37804.1| high mobility group protein [Brugia malayi]
gi|393906921|gb|EJD74451.1| high mobility group protein, variant [Loa loa]
Length = 90
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 46/74 (62%), Gaps = 4/74 (5%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKRAMS F + R+ IKK PG++ DV + G W M+ ++ +E +A
Sbjct: 19 DPNAPKRAMSAFFIWMNENRDRIKK--PGMSVGDVAKAAGIEWAAMT--DKSQWEKRAEE 74
Query: 497 DKKRYKDEISGYKN 510
DKKRY+ EI+ YKN
Sbjct: 75 DKKRYEREIAAYKN 88
>gi|397568766|gb|EJK46329.1| hypothetical protein THAOC_35006 [Thalassiosira oceanica]
Length = 356
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 71/137 (51%), Gaps = 11/137 (8%)
Query: 387 SDASESGGEKEKPAKKESKKESSSVKASTSKKKSRDGDEDG-----------KKKKQKKK 435
SD E + E P K++S+ E+ V+ S +++ +E K K+ K
Sbjct: 218 SDEDERKEKVENPLKRKSRVEAGPVEVDVSGQRTEANNEKPAAKPAVAIKRVKSNKKGKV 277
Query: 436 KDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKAR 495
+DPN PK ++ F F++ RE IK SNP F ++ ++G+ WK ++ +ER+ + A
Sbjct: 278 RDPNRPKAPLTAFNLFAKSRREKIKTSNPDKNFNEISALVGKAWKALADDERKQFFDDAA 337
Query: 496 ADKKRYKDEISGYKNPK 512
A++ YK+ ++ Y K
Sbjct: 338 AERAEYKEAMTRYNGSK 354
>gi|427778249|gb|JAA54576.1| Putative high mobility group protein 20a [Rhipicephalus pulchellus]
Length = 445
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 50/79 (63%)
Query: 431 KQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPY 490
++K+ +D NAP+R ++G++ F RE ++ +NP F DV ++L W K+S +E++ Y
Sbjct: 49 RRKRARDVNAPERPLTGYVRFLNDRREAVRAANPTANFPDVTKLLAIEWSKLSPQEKQKY 108
Query: 491 ESKARADKKRYKDEISGYK 509
+A D++RY E+ Y+
Sbjct: 109 LDEAEKDRERYSKELEQYQ 127
>gi|269862999|ref|XP_002651057.1| structure-specific recognition protein 1 [Enterocytozoon bieneusi
H348]
gi|220065197|gb|EED42999.1| structure-specific recognition protein 1 [Enterocytozoon bieneusi
H348]
Length = 405
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 125/274 (45%), Gaps = 36/274 (13%)
Query: 89 EEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFV 148
E +VT + ++PR R ++ + +G + D I Y V + L T++
Sbjct: 166 EVCIVT--NVNCVSPRSRVTLIFFETHFECRGSSYDHSIAYKDVTNVLFLETDTD--TYL 221
Query: 149 VVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFT 208
++ L+ PI +GQT Y +V + +E+ + +L+ Y G EV
Sbjct: 222 LLRLETPIVQGQTRYEGMVFSLD-----------KKEIEVSARDGRLQEYYHGGQDEVVV 270
Query: 209 TILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEID 268
I+ L G+ + KF +K + K DG L+ ++ FLPKP L + EEI
Sbjct: 271 EIIEKLIGST-AREAKFY-------IKCTNKVNDGYLFFMDTGLQFLPKPTFLSI-EEIK 321
Query: 269 YVEFERHAAGGSNMH--YFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGD 326
VEF R GGS + FD+ + E+ + F +I + ++ + ++ + G+K +
Sbjct: 322 AVEFSR--IGGSVLQGKSFDMTVH--GEKIYNFNSINKTDFTKVEEYFTHHGVKTV---- 373
Query: 327 MKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDE 360
M+ D V++ + D+ + H+ I ++A DE
Sbjct: 374 MEVIDEVSSEESKYSDE--EKHISGIIDDADSDE 405
>gi|440909289|gb|ELR59212.1| High mobility group protein 20A [Bos grunniens mutus]
Length = 351
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 417 KKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLG 476
++ R G G+K+K K +D NAPK ++G++ F RE ++ P + F ++ R+LG
Sbjct: 80 QRSKRGGWSKGRKRK-KPLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLG 138
Query: 477 ERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
W K+ EE++ Y +A DK+RY E+ Y+
Sbjct: 139 NEWSKLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|429855216|gb|ELA30184.1| hmg box protein [Colletotrichum gloeosporioides Nara gc5]
Length = 468
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Query: 417 KKKSRDGDEDGKKK-KQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVL 475
+ ++++G K+K ++ K D NAP+R S ++ FS R+ +K N + FT++ +++
Sbjct: 91 RPENKEGPVQAKRKYRRHPKPDENAPERPPSAYVLFSNKMRDELKGRN--LTFTEIAKLV 148
Query: 476 GERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
GE W+ ++ E+EPYE+ A K++Y +++ YK
Sbjct: 149 GEHWQNLTPAEKEPYETSALKAKEKYNHDLAEYK 182
>gi|426379912|ref|XP_004056631.1| PREDICTED: high mobility group protein 20A isoform 1 [Gorilla
gorilla gorilla]
gi|426379914|ref|XP_004056632.1| PREDICTED: high mobility group protein 20A isoform 2 [Gorilla
gorilla gorilla]
Length = 347
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 417 KKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLG 476
++ R G G+K+K K +D NAPK ++G++ F RE ++ P + F ++ R+LG
Sbjct: 80 QRSKRGGWSKGRKRK-KPLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLG 138
Query: 477 ERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
W K+ EE++ Y +A DK+RY E+ Y+
Sbjct: 139 NEWSKLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|115497282|ref|NP_001069105.1| high mobility group protein 20A [Bos taurus]
gi|111307054|gb|AAI20109.1| High-mobility group 20A [Bos taurus]
gi|296475408|tpg|DAA17523.1| TPA: high-mobility group 20A [Bos taurus]
Length = 347
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 417 KKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLG 476
++ R G G+K+K K +D NAPK ++G++ F RE ++ P + F ++ R+LG
Sbjct: 80 QRSKRGGWSKGRKRK-KPLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLG 138
Query: 477 ERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
W K+ EE++ Y +A DK+RY E+ Y+
Sbjct: 139 NEWSKLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|291411606|ref|XP_002722079.1| PREDICTED: high-mobility group 20A [Oryctolagus cuniculus]
Length = 347
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 55/93 (59%)
Query: 417 KKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLG 476
+++S+ G +K++K +D NAPK ++G++ F RE ++ P + F ++ R+LG
Sbjct: 79 EQRSKRGGWSKGRKRKKPLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLG 138
Query: 477 ERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
W K+ EE++ Y +A DK+RY E+ Y+
Sbjct: 139 NEWSKLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|75707631|gb|ABA26278.1| inhibitor of BRAF35 [Mus musculus]
Length = 342
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 55/93 (59%)
Query: 417 KKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLG 476
+++S+ G +K++K +D NAPK ++G++ F RE ++ P + F ++ R+LG
Sbjct: 74 EQRSKRGGWSKGRKRKKPLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLG 133
Query: 477 ERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
W K+ EE++ Y +A DK+RY E+ Y+
Sbjct: 134 NEWSKLPPEEKQRYLDEADRDKERYMKELEQYQ 166
>gi|427778651|gb|JAA54777.1| Putative high mobility group protein 20a [Rhipicephalus pulchellus]
Length = 371
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%)
Query: 431 KQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPY 490
++K+ +D NAP+R ++G++ F RE ++ +NP F DV ++L W K+S +E++ Y
Sbjct: 49 RRKRARDVNAPERPLTGYVRFLNDRREAVRAANPTANFPDVTKLLAIEWSKLSPQEKQKY 108
Query: 491 ESKARADKKRYKDEISGYKNPKPMDI 516
+A D++RY E+ Y+ + I
Sbjct: 109 LDEAEKDRERYSKELEQYQQTEAYRI 134
>gi|391344132|ref|XP_003746357.1| PREDICTED: high mobility group protein DSP1-like isoform 1
[Metaseiulus occidentalis]
gi|391344134|ref|XP_003746358.1| PREDICTED: high mobility group protein DSP1-like isoform 2
[Metaseiulus occidentalis]
Length = 187
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 49/80 (61%)
Query: 430 KKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREP 489
K +KKKDPNAPKRA+S F F Q ER +K + +V + LG +W+ + E++
Sbjct: 85 KAARKKKDPNAPKRALSAFFHFCQDERPKVKATLGESTVAEVAKELGRKWQDCTDEQKGK 144
Query: 490 YESKARADKKRYKDEISGYK 509
YE A DK+RY+ E++ YK
Sbjct: 145 YEQLAAKDKQRYEREMTAYK 164
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 441 PKRAMSGFIFFSQMERENIKKSNPG--IAFTDVGRVLGERWKKMSVEEREPYESKARADK 498
P+ MS + +F Q RE KK +P + F + + ERWK M+ E++ + A DK
Sbjct: 7 PRGRMSAYAYFVQTCREEHKKKHPNENVVFAEFSKKCAERWKTMNEPEKQRFHLMAAKDK 66
Query: 499 KRYKDEISGY 508
KRY++E+S Y
Sbjct: 67 KRYENEMSTY 76
>gi|226443200|ref|NP_001140081.1| High mobility group-T protein [Salmo salar]
gi|223649418|gb|ACN11467.1| High mobility group-T protein [Salmo salar]
Length = 345
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 53/83 (63%)
Query: 428 KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEER 487
K +K+K+ KDPNAPKR S F F R +K PG++ DV + LGE+W ++ E++
Sbjct: 223 KGEKKKRFKDPNAPKRPSSAFFIFCADFRPQVKGETPGLSIGDVAKKLGEKWNNLTAEDK 282
Query: 488 EPYESKARADKKRYKDEISGYKN 510
PYE KA K++Y+ +I+ Y+N
Sbjct: 283 VPYEKKAAKLKEKYEKDITAYRN 305
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 436 KDPNAPKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESK 493
KDP P+ MS + +F Q RE KK +P + F++ + ERWK MS +E+ +E
Sbjct: 145 KDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDL 204
Query: 494 ARADKKRYKDEISGYKNPK 512
A+ DK RY+ E+ Y PK
Sbjct: 205 AKLDKVRYEREMRSYIPPK 223
>gi|62897761|dbj|BAD96820.1| high-mobility group 20A variant [Homo sapiens]
Length = 347
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 417 KKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLG 476
++ R G G+K+K K +D NAPK ++G++ F RE ++ P + F ++ R+LG
Sbjct: 80 QRSKRGGWSKGRKRK-KPLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLG 138
Query: 477 ERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
W K+ EE++ Y +A DK+RY E+ Y+
Sbjct: 139 NEWSKLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|156369656|ref|XP_001628091.1| predicted protein [Nematostella vectensis]
gi|156215058|gb|EDO36028.1| predicted protein [Nematostella vectensis]
Length = 180
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 49/76 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPN PKR +S + F ++R+++KK NP + + +VLGE W KM+ +++ Y+ A+
Sbjct: 89 DPNKPKRCLSAYFHFINLKRDDVKKDNPNASGGALSKVLGEMWSKMTDDDKTQYQDMAKK 148
Query: 497 DKKRYKDEISGYKNPK 512
DK RY+ E+ +K+ K
Sbjct: 149 DKVRYESEMKAFKDGK 164
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 43/73 (58%)
Query: 439 NAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADK 498
N PK A S + FF Q +RE +++ + D +V E+WK MS EE+E + KA DK
Sbjct: 1 NKPKGAKSAYNFFLQDQREKLQREEGKFSLADFSKVSAEKWKNMSEEEKETFVQKAGKDK 60
Query: 499 KRYKDEISGYKNP 511
+R+K+E+ Y P
Sbjct: 61 ERFKEEMQSYTPP 73
>gi|223649496|gb|ACN11506.1| High mobility group protein B3 [Salmo salar]
Length = 207
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%)
Query: 431 KQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPY 490
K+ +KKDPNAPKR SGF F R IK +P + DV + LGE+W ++ ++PY
Sbjct: 83 KKGRKKDPNAPKRPPSGFFIFCADHRPKIKAQHPSLGIGDVAKKLGEQWNNLTDATKQPY 142
Query: 491 ESKARADKKRYKDEISGYKN 510
KA K +Y+ +++ YK+
Sbjct: 143 LIKANKLKDKYQKDVADYKS 162
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 438 PNAPKRAMSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKAR 495
P PK MS + +F Q RE KK +P I F + + RWK MS +E+ +E A+
Sbjct: 6 PGKPKGKMSAYAYFVQTCREEHKKKSPEIPVNFAEFSKKCSGRWKTMSGKEKGKFEDMAK 65
Query: 496 ADKKRYKDEI 505
DK RY +E+
Sbjct: 66 QDKVRYDNEM 75
>gi|297819892|ref|XP_002877829.1| hypothetical protein ARALYDRAFT_323737 [Arabidopsis lyrata subsp.
lyrata]
gi|297323667|gb|EFH54088.1| hypothetical protein ARALYDRAFT_323737 [Arabidopsis lyrata subsp.
lyrata]
Length = 185
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 429 KKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGI-AFTDVGRVLGERWKKMSVEER 487
+K++K KKDPN PKRA S F F + R KK NP + A + VG+ G++WK MS E+
Sbjct: 41 RKEKKAKKDPNKPKRAPSAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEK 100
Query: 488 EPYESKARADKKRYKDEISGY 508
PYE KA K Y+ ++ Y
Sbjct: 101 APYEEKAAKRKAEYEKQMDAY 121
>gi|148673204|gb|EDL05151.1| mCG5336 [Mus musculus]
Length = 216
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 48/78 (61%)
Query: 432 QKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYE 491
+KK KDPNAPKR S F F R IK +PG++ DV + LGE W +V +++PY
Sbjct: 86 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAVYDKQPYG 145
Query: 492 SKARADKKRYKDEISGYK 509
KA K++Y+ +I+ Y+
Sbjct: 146 KKAAKLKEKYEKDIAAYR 163
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 435 KKDPNAPKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYES 492
K DP P+ MS + FF Q RE KK +P + F++ + ERWK MS +E+ +E
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 493 KARADKKRYKDEISGYKNPK 512
A+ADK RY+ E+ Y PK
Sbjct: 63 MAKADKARYEREMKTYIPPK 82
>gi|154323224|ref|XP_001560926.1| hypothetical protein BC1G_00011 [Botryotinia fuckeliana B05.10]
Length = 263
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 69/137 (50%), Gaps = 4/137 (2%)
Query: 375 GGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSSVKASTSKKKSRDGDEDGKKKKQKK 434
G S DD E SD S S P KA K G K+K ++
Sbjct: 59 GVSERDDCDFEPSDTSSSYRALASPTSTTPDNHGDEPKAGARDAKEGSSGPHGAKRKYRR 118
Query: 435 --KKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYES 492
K D +AP+R S ++ FS RE++K ++FT++ +++GE W+ +S E+EPYE
Sbjct: 119 HPKPDESAPERPPSAYVIFSNKMREDLKGR--ALSFTEIAKLVGENWQNLSPSEKEPYEH 176
Query: 493 KARADKKRYKDEISGYK 509
+A K+RY +E++ YK
Sbjct: 177 QAYTAKERYNNELAEYK 193
>gi|344245608|gb|EGW01712.1| High mobility group protein B1 [Cricetulus griseus]
Length = 162
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%)
Query: 432 QKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYE 491
+KK KDPNAPKR S F F IK PG++ D + LGE W + E+++PYE
Sbjct: 35 KKKFKDPNAPKRPPSAFFLFCSEYHPKIKGERPGLSIGDAAKKLGETWNSTAAEDKQPYE 94
Query: 492 SKARADKKRYKDEISGYK 509
+KA K++Y+ +I+ Y+
Sbjct: 95 TKAAKLKEQYEKDIADYR 112
>gi|124512426|ref|XP_001349346.1| high mobility group protein [Plasmodium falciparum 3D7]
gi|23499115|emb|CAD51195.1| high mobility group protein [Plasmodium falciparum 3D7]
Length = 99
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKA 494
DP APKRA+S ++F+ + +R I K P +A VG+++GE W ++S ++ PYE KA
Sbjct: 20 DPLAPKRALSAYMFYVKDKRLEIIKEKPELAKDVAQVGKLIGEAWGQLSPAQKAPYEKKA 79
Query: 495 RADKKRYKDEISGYKN 510
+ DK RY EI Y+
Sbjct: 80 QLDKVRYSKEIEEYRK 95
>gi|268532742|ref|XP_002631499.1| Hypothetical protein CBG20663 [Caenorhabditis briggsae]
Length = 92
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 47/73 (64%), Gaps = 5/73 (6%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKRAMS F F+ Q RE IKK PG+ DV + G W K++ ++ +E KA A
Sbjct: 23 DPNAPKRAMSAFFFWMQENRERIKK--PGMGVADVAKAAGVEWGKLT--DKSKWEKKA-A 77
Query: 497 DKKRYKDEISGYK 509
D KRY+ +I+ YK
Sbjct: 78 DDKRYETDIANYK 90
>gi|52219178|ref|NP_001004674.1| high-mobility group box 2b [Danio rerio]
gi|51858850|gb|AAH81415.1| High-mobility group box 2 [Danio rerio]
gi|182889482|gb|AAI65150.1| Hmgb2 protein [Danio rerio]
Length = 214
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 433 KKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYES 492
+KKKDPNAPKR S F F R +K +P + ++ + LGE W K S ++R P+E
Sbjct: 89 RKKKDPNAPKRPPSAFFVFCSEYRPTVKSEHPNLTIGEIAKKLGELWSKQSSKDRAPFEQ 148
Query: 493 KARADKKRYKDEISGYK 509
KA +++Y+ E++ Y+
Sbjct: 149 KAGKLREKYEKEVAAYR 165
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 435 KKDPNAPKRAMSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYES 492
K D N PK S + FF Q R+ K+ +P + F++ + ERWK ++ ++ +E
Sbjct: 3 KGDVNKPKGKTSAYAFFVQTCRDEHKRKSPDVPVNFSEFSKKCSERWKSLNASDKVKFED 62
Query: 493 KARADKKRYKDEISGYKNPK 512
A+ADK RY E+ Y PK
Sbjct: 63 MAKADKVRYDREMKTYVPPK 82
>gi|71896259|ref|NP_001025565.1| high mobility group protein 20A [Gallus gallus]
gi|75571328|sp|Q5ZKF4.1|HM20A_CHICK RecName: Full=High mobility group protein 20A; AltName: Full=HMG
box-containing protein 20A
gi|53131076|emb|CAG31789.1| hypothetical protein RCJMB04_11c24 [Gallus gallus]
Length = 348
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 58/103 (56%)
Query: 407 ESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGI 466
E++ K +++++ G +K++K +D NAPK ++G++ F RE ++ P +
Sbjct: 70 ENTEQKPEEEQQRTKRGGWAKGRKRKKPLRDSNAPKSPLTGYVRFMNERREQLRAKRPEV 129
Query: 467 AFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
F ++ R+LG W K+ EE+ Y +A DK+RY E+ Y+
Sbjct: 130 PFPEITRMLGNEWSKLPPEEKRRYLDEADRDKERYMRELEQYQ 172
>gi|213982973|ref|NP_001135648.1| uncharacterized protein LOC100216207 [Xenopus (Silurana)
tropicalis]
gi|156914901|gb|AAI52619.1| Hmgb2 protein [Danio rerio]
gi|197245630|gb|AAI68534.1| Unknown (protein for MGC:181066) [Xenopus (Silurana) tropicalis]
Length = 214
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 433 KKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYES 492
+KKKDPNAPKR S F F R +K +P + ++ + LGE W K S ++R P+E
Sbjct: 89 RKKKDPNAPKRPPSAFFVFCSEYRPTVKSEHPNLTIGEIAKKLGELWSKQSSKDRAPFEQ 148
Query: 493 KARADKKRYKDEISGYK 509
KA +++Y+ E++ Y+
Sbjct: 149 KAGKLREKYEKEVAAYR 165
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 435 KKDPNAPKRAMSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYES 492
K D N PK S + FF Q R+ K+ P + F++ + ERWK ++ ++ +E
Sbjct: 3 KGDVNKPKGKTSAYAFFVQTCRDEHKRKGPDVPVNFSEFSKKCSERWKSLNASDKVKFED 62
Query: 493 KARADKKRYKDEISGYKNPK 512
A+ADK RY E+ Y PK
Sbjct: 63 MAKADKVRYDREMKTYVPPK 82
>gi|225704132|gb|ACO07912.1| High mobility group protein B1 [Oncorhynchus mykiss]
Length = 194
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 48/80 (60%)
Query: 430 KKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREP 489
+K+K+ KDPNAPKR S F F R IK +PG++ D + LG W + EE++P
Sbjct: 83 QKKKRFKDPNAPKRPPSAFFIFCADFRAKIKSEHPGLSIGDTAKKLGVMWNSSAAEEKKP 142
Query: 490 YESKARADKKRYKDEISGYK 509
YE KA K++Y +I+ Y+
Sbjct: 143 YEKKAATLKEKYDKDIASYR 162
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 436 KDPNAPKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESK 493
KDP P+ MS + +F Q R KK +P + F + + ERWK MS +E+ +E
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCRAEHKKKHPEASVNFAEFSKKCSERWKPMSPKEKGKFEDM 62
Query: 494 ARADKKRYKDEISGYKNP 511
A+ DK RY+ E+ Y P
Sbjct: 63 AKQDKVRYEGEMKNYIPP 80
>gi|427781171|gb|JAA56037.1| Putative high mobility group protein 20a [Rhipicephalus pulchellus]
Length = 308
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 50/79 (63%)
Query: 431 KQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPY 490
++K+ +D NAP+R ++G++ F RE ++ +NP F DV ++L W K+S +E++ Y
Sbjct: 49 RRKRARDVNAPERPLTGYVRFLNDRREAVRAANPTANFPDVTKLLAIEWSKLSPQEKQKY 108
Query: 491 ESKARADKKRYKDEISGYK 509
+A D++RY E+ Y+
Sbjct: 109 LDEAEKDRERYSKELEQYQ 127
>gi|229367676|gb|ACQ58818.1| High mobility group protein B1 [Anoplopoma fimbria]
Length = 197
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 47/83 (56%)
Query: 428 KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEER 487
K +K+K+ KDPNAPKR S F F R +K +PG+ D + LGE W S E +
Sbjct: 81 KGQKKKRFKDPNAPKRPPSAFFLFCGDFRPKVKSEHPGLTIGDTAKKLGEMWNSSSAENK 140
Query: 488 EPYESKARADKKRYKDEISGYKN 510
+PYE KA K++Y +I Y+
Sbjct: 141 QPYERKAAKLKEKYDKDIVAYRT 163
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 436 KDPNAPKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESK 493
KDP PK MS + +F Q RE KK +P + F + + ERWK MS + + +E
Sbjct: 3 KDPRKPKGKMSSYAYFVQTCREEHKKKHPEASVNFAEFSKKCSERWKTMSQKGKGKFEDM 62
Query: 494 ARADKKRYKDEISGYKNPK 512
A+ DK RY+ ++ Y PK
Sbjct: 63 AKLDKVRYERDMKNYDPPK 81
>gi|194206436|ref|XP_001490860.2| PREDICTED: high mobility group protein 20A [Equus caballus]
Length = 322
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 417 KKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLG 476
++ R G G+K+K K +D NAPK ++G++ F RE ++ P + F ++ R+LG
Sbjct: 55 QRSKRGGWSKGRKRK-KPLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLG 113
Query: 477 ERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
W K+ EE++ Y +A DK+RY E+ Y+
Sbjct: 114 NEWSKLPPEEKQRYLDEADRDKERYMKELEQYQ 146
>gi|51858856|gb|AAH81424.1| Hmgb3b protein [Danio rerio]
Length = 166
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%)
Query: 429 KKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEERE 488
KK +K+KKDPNAP+R SGF F +R IK NP + DV + LG W +S E++
Sbjct: 82 KKGRKQKKDPNAPRRPPSGFFLFCAEQRPIIKAQNPSLGIGDVAKKLGGMWNNLSDSEKQ 141
Query: 489 PYESKARADKKRYKDEISGYKNPK 512
P+ S A K +Y+ +++ YK K
Sbjct: 142 PFLSNADKLKDKYQKDMAFYKKKK 165
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 435 KKDPNAPKRAMSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYES 492
K DP PK MS + +F + RE K NPG+ F++ + ERWK MS +E+ +E
Sbjct: 3 KGDPGKPKGKMSAYAYFVKTCREEHNKKNPGVTVNFSEFSKKCSERWKTMSPKEKTKFED 62
Query: 493 KARADKKRYKDEISGYKNP 511
A+ DK RY E+ Y NP
Sbjct: 63 LAKQDKARYDQEMMHY-NP 80
>gi|340370210|ref|XP_003383639.1| PREDICTED: hypothetical protein LOC100632823 [Amphimedon
queenslandica]
Length = 436
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
Query: 426 DGKKK---KQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKM 482
DG+K ++K+KDP+ PKR MS F+F+S+ +R +++ N + + ++L +WK M
Sbjct: 329 DGQKPIYHPRRKRKDPDMPKRNMSAFMFYSKAKRPHLRAQNMTLRVGQLAQILAAQWKIM 388
Query: 483 SVEEREPYESKARADKKRYKDEISGYK 509
S E++ ++ AR DK+RY+ ++ Y+
Sbjct: 389 SPSEKKQFDDMARKDKERYEMQLKAYR 415
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
Query: 401 KKESKKESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIK 460
K+ +KES+S AS + D K+ +K+K+P PKR M F+ F +R ++
Sbjct: 179 KERFRKESASYHASLGQPY-----RDSNSKRGRKRKEPGQPKRNMCAFLHFCAEKRPKLR 233
Query: 461 KSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGY 508
+P + + + L WK M+ +++ PYE A DK RY+ + Y
Sbjct: 234 VESPAASIGALAKQLSLAWKVMTPDQKRPYEDMAMRDKLRYEQQKQAY 281
Score = 38.5 bits (88), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 38/73 (52%)
Query: 436 KDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKAR 495
KD + P+ M+ + FF Q RE ++ + FT + WK++ +E+ ++ +
Sbjct: 117 KDRSRPRGRMTPYAFFVQERREYYRRHGVPVEFTAFSKECSSLWKELKDDEKSRFQKMSE 176
Query: 496 ADKKRYKDEISGY 508
DK+R++ E + Y
Sbjct: 177 DDKERFRKESASY 189
>gi|345567385|gb|EGX50317.1| hypothetical protein AOL_s00076g81 [Arthrobotrys oligospora ATCC
24927]
Length = 551
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 428 KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEER 487
+K ++ + D NAP++ S ++ F+ RE +K N ++FT++ R++G+RWK + E++
Sbjct: 105 RKYRRHPRPDENAPEKPPSAYVMFANNVREELKGQN--LSFTEIARLVGDRWKVLPPEQK 162
Query: 488 EPYESKARADKKRYKDEISGYK 509
E YE +A K RY E++ YK
Sbjct: 163 EEYEYRAGVMKDRYNQELAAYK 184
>gi|224061734|ref|XP_002194749.1| PREDICTED: high mobility group protein 20A [Taeniopygia guttata]
Length = 348
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 58/103 (56%)
Query: 407 ESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGI 466
E++ K +++++ G +K++K +D NAPK ++G++ F RE ++ P +
Sbjct: 70 ETTEQKPEEEQQRTKRGGWAKGRKRKKPLRDSNAPKSPLTGYVRFMNERREQLRAKRPEV 129
Query: 467 AFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
F ++ R+LG W K+ EE+ Y +A DK+RY E+ Y+
Sbjct: 130 PFPEITRMLGNEWSKLPPEEKRRYLDEADRDKERYMRELEQYQ 172
>gi|148693920|gb|EDL25867.1| high mobility group 20A, isoform CRA_c [Mus musculus]
Length = 403
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 54/92 (58%)
Query: 418 KKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGE 477
++S+ G +K++K +D NAPK ++G++ F RE ++ P + F ++ R+LG
Sbjct: 103 QRSKRGGWSKGRKRKKPLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGN 162
Query: 478 RWKKMSVEEREPYESKARADKKRYKDEISGYK 509
W K+ EE++ Y +A DK+RY E+ Y+
Sbjct: 163 EWSKLPPEEKQRYLDEADRDKERYMKELEQYQ 194
>gi|82594869|ref|XP_725606.1| high mobility group protein [Plasmodium yoelii yoelii 17XNL]
gi|23480678|gb|EAA17171.1| high mobility group protein [Plasmodium yoelii yoelii]
Length = 105
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
Query: 429 KKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEE 486
K ++K KDP+APKR++S ++FF++ +R I +P ++ VG+++GE W K+ E
Sbjct: 18 KXRRKNXKDPHAPKRSLSAYMFFAKEKRAEIITRDPSLSKDVATVGKMIGEAWNKLDERE 77
Query: 487 REPYESKARADKKRYKDEISGY 508
+ PYE KA+ DK RY+ E Y
Sbjct: 78 KAPYEKKAQEDKIRYEKEKMEY 99
>gi|336366372|gb|EGN94719.1| hypothetical protein SERLA73DRAFT_187779 [Serpula lacrymans var.
lacrymans S7.3]
gi|336379042|gb|EGO20198.1| hypothetical protein SERLADRAFT_477580 [Serpula lacrymans var.
lacrymans S7.9]
Length = 119
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 54/92 (58%)
Query: 413 ASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVG 472
A+ K+K+ + E + K K PKRA+S ++FFSQ RE IK NP F +VG
Sbjct: 5 ATKPKRKAAEKAEKTSRAKATKAAKGTGPKRALSAYMFFSQDWRERIKAENPDAGFGEVG 64
Query: 473 RVLGERWKKMSVEEREPYESKARADKKRYKDE 504
++LG +WK++ E++PY A DK R ++E
Sbjct: 65 KLLGAKWKELDESEKKPYVELAAKDKARAEEE 96
>gi|391325154|ref|XP_003737104.1| PREDICTED: high mobility group protein 20A-like [Metaseiulus
occidentalis]
Length = 391
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 55/93 (59%)
Query: 417 KKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLG 476
K++ R ++K++ + KD NAPK ++G++ F RE +K NP +AF ++ ++L
Sbjct: 83 KRRGRPPKPGNERKRRPRAKDVNAPKAPINGYVRFLNENRERCRKVNPEVAFANITKLLA 142
Query: 477 ERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
+ W ++ E+++ Y A D++RY E+ Y+
Sbjct: 143 QEWSQLKQEDKQKYLDAAEKDRERYMKEVEEYQ 175
>gi|225703866|gb|ACO07779.1| High mobility group protein B1 [Oncorhynchus mykiss]
Length = 194
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 47/79 (59%)
Query: 431 KQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPY 490
K+K+ KDPNAPKR S F F R IK +PG++ D + LG W + EE++PY
Sbjct: 84 KKKRFKDPNAPKRPPSAFFIFCADFRAKIKSEHPGLSIGDTAKKLGVMWNSSAAEEKKPY 143
Query: 491 ESKARADKKRYKDEISGYK 509
E KA K++Y +I+ Y+
Sbjct: 144 EKKAATLKEKYDKDIASYR 162
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 436 KDPNAPKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESK 493
KDP P+ MS + +F Q R KK +P + F + + ERWK MS +E+ +E
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCRAEHKKKHPEASVNFAEFSKKCSERWKPMSPKEKGKFEDM 62
Query: 494 ARADKKRYKDEISGYKNP 511
A+ DK RY+ E+ Y P
Sbjct: 63 AKQDKVRYEREMKNYIPP 80
>gi|221221922|gb|ACM09622.1| High mobility group protein B1 [Salmo salar]
Length = 196
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 47/79 (59%)
Query: 431 KQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPY 490
K+K+ KDPNAPKR S F F R IK +PG++ D + LG W + EE++PY
Sbjct: 84 KKKRFKDPNAPKRPPSAFFIFCADFRAKIKSEHPGLSIGDTAKKLGVMWNSSAAEEKKPY 143
Query: 491 ESKARADKKRYKDEISGYK 509
E KA K++Y +I+ Y+
Sbjct: 144 EKKAATLKEKYDKDIASYR 162
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 436 KDPNAPKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESK 493
KDP P+ MS + +F Q R KK +P + F + + ERWK MS +E+ +E
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCRAEHKKKHPEASVNFAEFSKKCSERWKPMSPKEKGKFEDM 62
Query: 494 ARADKKRYKDEISGYKNP 511
A+ DK RY+ E+ Y P
Sbjct: 63 AKQDKVRYEREMKNYIPP 80
>gi|221219434|gb|ACM08378.1| High mobility group protein B1 [Salmo salar]
Length = 196
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 47/79 (59%)
Query: 431 KQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPY 490
K+K+ KDPNAPKR S F F R IK +PG++ D + LG W + EE++PY
Sbjct: 84 KKKRFKDPNAPKRPPSAFFIFCADFRAKIKSEHPGLSIGDTAKKLGVMWNSSAAEEKKPY 143
Query: 491 ESKARADKKRYKDEISGYK 509
E KA K++Y +I+ Y+
Sbjct: 144 EKKAATLKEKYDKDIASYR 162
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 436 KDPNAPKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESK 493
KDP P+ MS + +F Q R KK +P + F + + ERWK MS +E+ +E
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCRAEHKKKHPEASVNFAEFSKKCSERWKPMSPKEKGKFEDM 62
Query: 494 ARADKKRYKDEISGYKNP 511
A+ DK RY+ E+ Y P
Sbjct: 63 AKQDKVRYEREMKNYIPP 80
>gi|320589146|gb|EFX01608.1| chromatin-associated protein [Grosmannia clavigera kw1407]
Length = 593
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 428 KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEER 487
+K ++ K D AP+R S ++ FS RE +K N ++FT++ +++GE W+ ++ ER
Sbjct: 109 RKYRRHPKPDECAPERPPSAYVLFSNKMREKLKGQN--LSFTEIAKLVGENWQTLTPAER 166
Query: 488 EPYESKARADKKRYKDEISGYK 509
+PYE++A+A K +Y + YK
Sbjct: 167 KPYETEAQAAKDKYNHAMVVYK 188
>gi|229365968|gb|ACQ57964.1| High mobility group protein B1 [Anoplopoma fimbria]
Length = 197
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 47/83 (56%)
Query: 428 KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEER 487
K +K+K+ KDPNAPKR S F F R +K +PG+ D + LGE W S E +
Sbjct: 81 KGQKKKRFKDPNAPKRPPSAFFLFCGDFRPKVKSEHPGLTIGDTAKKLGEMWNSSSAENK 140
Query: 488 EPYESKARADKKRYKDEISGYKN 510
+PYE KA K++Y +I Y+
Sbjct: 141 QPYERKAAKLKEKYDKDIVAYRT 163
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 436 KDPNAPKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESK 493
KDP PK MS + +F Q RE KK +P + F + + ERWK MS +E+ +E
Sbjct: 3 KDPRKPKGKMSSYAYFVQTCREEHKKKHPEASVNFAEFSKKCSERWKTMSQKEKGKFEDM 62
Query: 494 ARADKKRYKDEISGYKNPK 512
A+ DK RY+ ++ Y PK
Sbjct: 63 AKLDKVRYERDMKNYDPPK 81
>gi|269866208|ref|XP_002652193.1| structure-specific recognition protein 1 [Enterocytozoon bieneusi
H348]
gi|220062983|gb|EED41863.1| structure-specific recognition protein 1 [Enterocytozoon bieneusi
H348]
Length = 270
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 107/236 (45%), Gaps = 30/236 (12%)
Query: 89 EEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFV 148
E +VT + ++PR R ++ + +G + D I Y V + L T++
Sbjct: 31 EVCIVT--NVNCVSPRSRVTLIFFETHFECRGSSYDHSIAYKDVTNVLFLETDTD--TYL 86
Query: 149 VVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMSEELLNTKYKDKLEPSYKGLIHEVFT 208
++ L+ PI +GQT Y +V + +E+ + +L+ Y G EV
Sbjct: 87 LLRLETPIVQGQTRYEGMVFSLD-----------KKEIEVSARDGRLQEYYHGGQDEVVV 135
Query: 209 TILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEID 268
I+ L G+ + KF +K + K DG L+ ++ FLPKP L + EEI
Sbjct: 136 EIIEKLIGST-AREAKFY-------IKCTNKVNDGYLFFMDTGLQFLPKPTFLSI-EEIK 186
Query: 269 YVEFERHAAGGSNMH--YFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIM 322
VEF R GGS + FD+ + E+ + F +I + ++ + ++ + G+K +
Sbjct: 187 AVEFSR--IGGSVLQGKSFDMTVH--GEKIYNFNSINKTDFTKVEEYFTHHGVKTV 238
>gi|326926383|ref|XP_003209381.1| PREDICTED: high mobility group protein 20A-like [Meleagris
gallopavo]
Length = 348
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 58/103 (56%)
Query: 407 ESSSVKASTSKKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGI 466
E++ K +++++ G +K++K +D NAPK ++G++ F RE ++ P +
Sbjct: 70 ENTEQKPEEEQQRTKRGGWAKGRKRKKPLRDSNAPKSPLTGYVRFMNERREQLRAKRPEV 129
Query: 467 AFTDVGRVLGERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
F ++ R+LG W K+ EE+ Y +A DK+RY E+ Y+
Sbjct: 130 PFPEITRMLGNEWSKLPPEEKRRYLDEADRDKERYMRELEQYQ 172
>gi|148223673|ref|NP_001079576.1| HMG-X protein [Xenopus laevis]
gi|639691|dbj|BAA06440.1| HMG-X protein [Xenopus laevis]
Length = 212
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 48/79 (60%)
Query: 431 KQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPY 490
K K+KKDPNAPKR S F F R IK PG++ D + LGE W + + +++ P+
Sbjct: 86 KGKRKKDPNAPKRPPSAFFIFCSEHRPQIKSETPGLSIGDTAKKLGELWAEQTPKDKLPH 145
Query: 491 ESKARADKKRYKDEISGYK 509
E KA K++Y+ +++ Y+
Sbjct: 146 EQKAAKLKEKYEKDVAAYR 164
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 435 KKDPNAPKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYES 492
K DPN P+ MS + +F Q RE KK +P + F+D + ERWK MS +E+ +E
Sbjct: 3 KGDPNKPRGKMSSYAYFVQTCREEHKKKHPDTSVNFSDFSKKCSERWKSMSAKEKGKFED 62
Query: 493 KARADKKRYKDEISGYKNPK 512
A+ DK RY+ E+ Y PK
Sbjct: 63 LAKGDKARYEREMKTYIPPK 82
>gi|328909415|gb|AEB61375.1| high mobility group protein 20A-like protein, partial [Equus
caballus]
Length = 300
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 417 KKKSRDGDEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLG 476
++ R G G+K+K K +D NAPK ++G++ F RE ++ P + F ++ R+LG
Sbjct: 80 QRSKRGGWSKGRKRK-KPLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLG 138
Query: 477 ERWKKMSVEEREPYESKARADKKRYKDEISGYK 509
W K+ EE++ Y +A DK+RY E+ Y+
Sbjct: 139 NEWSKLPPEEKQRYLDEADRDKERYMKELEQYQ 171
>gi|15231065|ref|NP_190756.1| high mobility group protein B1 [Arabidopsis thaliana]
gi|145332807|ref|NP_001078269.1| high mobility group protein B1 [Arabidopsis thaliana]
gi|75274976|sp|O49595.1|HMGB1_ARATH RecName: Full=High mobility group B protein 1; AltName: Full=High
mobility group protein A; Short=AtHMGalpha; Short=HMG
alpha; AltName: Full=Nucleosome/chromatin assembly
factor group D 01; Short=Nucleosome/chromatin assembly
factor group D 1
gi|2832357|emb|CAA74400.1| HMG protein [Arabidopsis thaliana]
gi|3068715|gb|AAC14415.1| unknown [Arabidopsis thaliana]
gi|15912191|gb|AAL08229.1| At3g51880/ORF13 [Arabidopsis thaliana]
gi|21360557|gb|AAM47475.1| At3g51880/ORF13 [Arabidopsis thaliana]
gi|332645334|gb|AEE78855.1| high mobility group protein B1 [Arabidopsis thaliana]
gi|332645336|gb|AEE78857.1| high mobility group protein B1 [Arabidopsis thaliana]
Length = 178
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 429 KKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGI-AFTDVGRVLGERWKKMSVEER 487
+K++K KKDPN PKRA S F F + R KK NP + A + VG+ G++WK MS E+
Sbjct: 41 RKEKKAKKDPNKPKRAPSAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEK 100
Query: 488 EPYESKARADKKRYKDEISGY 508
PYE KA K Y+ ++ Y
Sbjct: 101 APYEEKAAKRKAEYEKQMDAY 121
>gi|351706443|gb|EHB09362.1| High mobility group protein B3 [Heterocephalus glaber]
Length = 226
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 45/74 (60%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DPNAPKR SGF F R IK + PGI DV + LGE W +S E++PY +K
Sbjct: 108 DPNAPKRPPSGFFLFCSEFRPKIKSTKPGITIGDVAKKLGEMWNNLSDSEKQPYITKVAK 167
Query: 497 DKKRYKDEISGYKN 510
K++++ +++ YK+
Sbjct: 168 LKEKHEKDVADYKS 181
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 445 MSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYESKARADK 498
MS + FF Q +E KK NP + F + + ERWK MS +E+ ++ A+ DK
Sbjct: 32 MSAYAFFVQTCKEEHKKKNPKVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKVDK 87
>gi|346327301|gb|EGX96897.1| High mobility group, superfamily [Cordyceps militaris CM01]
Length = 513
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
Query: 428 KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEER 487
+K ++ K D NAP+R S ++ FS RE++K N ++FT++ +++GE W+ + ER
Sbjct: 106 RKYRRHPKSDENAPERPPSAYVLFSNKMREDLKSHN--LSFTEIAKLVGENWQNLDQGER 163
Query: 488 EPYESKARADKKRYKDEISGYK 509
E YE++A A K +Y+ ++ YK
Sbjct: 164 ELYENQANAAKDKYRRSLTEYK 185
>gi|397641752|gb|EJK74832.1| hypothetical protein THAOC_03468, partial [Thalassiosira oceanica]
Length = 599
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
Query: 431 KQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPY 490
K+KKK+DP APK+ + ++FF R IK SNP F ++ +LG+ +++++ E++ P+
Sbjct: 134 KKKKKRDPAAPKKPKNAYLFFCAETRPEIKASNPDATFGELQTLLGKAYRELTPEDKAPF 193
Query: 491 ESKARADKKRYKDEISGYKNPKPMDID 517
+ A ADK RY E+ Y PM D
Sbjct: 194 DKLAEADKLRYGQELERY---SPMASD 217
>gi|310790717|gb|EFQ26250.1| HMG box protein [Glomerella graminicola M1.001]
Length = 500
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
Query: 428 KKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEER 487
+K ++ K D NAP+R S ++ FS R+++K N + FT++ +++GE W+ ++ E+
Sbjct: 103 RKYRRHPKPDENAPERPPSAYVLFSNKMRDDLKGRN--LTFTEIAKLVGEHWQNLTPGEK 160
Query: 488 EPYESKARADKKRYKDEISGYK 509
EPYE+ A K++Y +++ YK
Sbjct: 161 EPYETSALKAKEKYNHDLAEYK 182
>gi|397475678|ref|XP_003809257.1| PREDICTED: high mobility group protein B3-like [Pan paniscus]
Length = 165
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 48/74 (64%)
Query: 437 DPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPYESKARA 496
DP+APKR SGF FS R IK +NPGI+ DV + LGE W ++ E++PY +KA
Sbjct: 66 DPSAPKRPPSGFFLFSSEIRPKIKSTNPGISVGDVAKKLGEMWNNLNDSEKQPYITKAAK 125
Query: 497 DKKRYKDEISGYKN 510
K++Y+ +++ K+
Sbjct: 126 LKEKYEKDVADSKS 139
>gi|213513415|ref|NP_001133101.1| high mobility group protein B1 [Salmo salar]
gi|197631937|gb|ACH70692.1| high-mobility group box 1 [Salmo salar]
Length = 203
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 51/80 (63%)
Query: 431 KQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEEREPY 490
K+K+ KDPNAPKR S F F R +K PG++ DV + LGE+W ++ E++ PY
Sbjct: 84 KKKRFKDPNAPKRPSSAFFIFCADFRPQVKGETPGLSIGDVAKKLGEKWNNLTAEDKVPY 143
Query: 491 ESKARADKKRYKDEISGYKN 510
E KA K++Y+ +I+ Y+N
Sbjct: 144 EKKAAKLKEKYEKDITAYRN 163
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 436 KDPNAPKRAMSGFIFFSQMERENIKKSNP--GIAFTDVGRVLGERWKKMSVEEREPYESK 493
KDP P+ MS + +F Q RE KK +P + F++ + ERW+ MS +E+ +E
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWRTMSAKEKGKFEDL 62
Query: 494 ARADKKRYKDEISGYKNPK 512
A+ DK RY+ E+ Y PK
Sbjct: 63 AKLDKVRYEREMRSYIPPK 81
>gi|62955511|ref|NP_001017769.1| high mobility group protein B3 [Danio rerio]
gi|62202670|gb|AAH93186.1| High-mobility group box 3b [Danio rerio]
gi|182890656|gb|AAI64996.1| Hmgb3b protein [Danio rerio]
Length = 198
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 429 KKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMSVEERE 488
KK +K+KKDPNAP+R SGF F +R IK NP + DV + LG W +S E++
Sbjct: 82 KKGRKQKKDPNAPRRPPSGFFLFCAEQRPIIKAQNPSLGIGDVAKKLGGMWNNLSDSEKQ 141
Query: 489 PYESKARADKKRYKDEISGYK 509
P+ S A K +Y+ +++ Y+
Sbjct: 142 PFLSNADKLKDKYQKDMAFYR 162
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 435 KKDPNAPKRAMSGFIFFSQMERENIKKSNPGIA--FTDVGRVLGERWKKMSVEEREPYES 492
K DP PK MS + +F + RE K NPG+ F++ + ERWK MS +E+ +E
Sbjct: 3 KGDPGKPKGKMSAYAYFVKTCREEHNKKNPGVTVNFSEFSKKCSERWKTMSPKEKTKFED 62
Query: 493 KARADKKRYKDEISGYKNP 511
A+ DK RY E+ Y NP
Sbjct: 63 LAKQDKARYDQEMMHY-NP 80
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.312 0.132 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,580,398,257
Number of Sequences: 23463169
Number of extensions: 391629773
Number of successful extensions: 3396221
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 11687
Number of HSP's successfully gapped in prelim test: 22150
Number of HSP's that attempted gapping in prelim test: 2581351
Number of HSP's gapped (non-prelim): 436108
length of query: 525
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 378
effective length of database: 8,910,109,524
effective search space: 3368021400072
effective search space used: 3368021400072
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 79 (35.0 bits)