Query 009805
Match_columns 525
No_of_seqs 472 out of 3467
Neff 10.3
Searched_HMMs 29240
Date Mon Mar 25 13:23:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009805.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009805hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n11_A Ankyrin; clathrin, BAND 100.0 3.3E-55 1.1E-59 445.1 38.6 355 2-397 15-370 (437)
2 1n11_A Ankyrin; clathrin, BAND 100.0 1.6E-54 5.3E-59 440.1 38.6 340 2-377 48-388 (437)
3 4g8k_A 2-5A-dependent ribonucl 100.0 5.9E-43 2E-47 342.3 30.2 289 33-361 24-329 (337)
4 4g8k_A 2-5A-dependent ribonucl 100.0 2E-42 6.9E-47 338.5 31.5 294 74-400 21-330 (337)
5 3utm_A Tankyrase-1; tankyrase, 100.0 2.7E-43 9.2E-48 346.6 24.0 308 20-374 10-321 (351)
6 3utm_A Tankyrase-1; tankyrase, 100.0 6.2E-42 2.1E-46 336.8 30.0 320 3-376 26-349 (351)
7 1wdy_A 2-5A-dependent ribonucl 100.0 5.2E-42 1.8E-46 327.0 28.4 263 77-363 4-283 (285)
8 1wdy_A 2-5A-dependent ribonucl 100.0 1.5E-41 5.1E-46 323.9 29.6 263 33-329 4-283 (285)
9 2fo1_E LIN-12 protein; beta-ba 100.0 1.9E-42 6.4E-47 343.0 18.1 308 2-352 38-367 (373)
10 2xai_A ASB-9, ankyrin repeat a 100.0 9.1E-41 3.1E-45 314.3 24.0 243 77-343 2-249 (261)
11 2fo1_E LIN-12 protein; beta-ba 100.0 2.2E-41 7.6E-46 335.3 20.2 278 5-319 70-369 (373)
12 3d9h_A CDNA FLJ77766, highly s 100.0 1.5E-40 5E-45 316.9 24.9 255 33-318 14-275 (285)
13 3d9h_A CDNA FLJ77766, highly s 100.0 4.1E-40 1.4E-44 313.8 25.2 270 74-359 11-280 (285)
14 2xai_A ASB-9, ankyrin repeat a 100.0 3E-40 1E-44 310.8 22.1 251 33-317 2-259 (261)
15 3ljn_A Hypothetical protein; a 100.0 2.4E-40 8.1E-45 327.4 16.9 261 71-352 13-310 (364)
16 3ljn_A Hypothetical protein; a 100.0 3.2E-40 1.1E-44 326.4 17.6 264 25-318 11-311 (364)
17 1yyh_A HN1;, notch 1, ankyrin 100.0 3.3E-39 1.1E-43 302.2 23.1 228 119-352 3-243 (253)
18 1yyh_A HN1;, notch 1, ankyrin 100.0 2.2E-39 7.7E-44 303.4 21.8 242 26-317 2-244 (253)
19 3b7b_A Euchromatic histone-lys 100.0 3E-38 1E-42 292.7 26.0 225 72-316 5-230 (237)
20 1oy3_D Transcription factor in 100.0 6.7E-39 2.3E-43 305.2 22.0 263 71-375 2-267 (282)
21 1k1a_A B-cell lymphoma 3-encod 100.0 5.7E-39 2E-43 298.3 20.6 231 72-318 3-238 (241)
22 1k1a_A B-cell lymphoma 3-encod 100.0 1.2E-38 4.3E-43 296.0 22.3 227 119-351 2-236 (241)
23 3b7b_A Euchromatic histone-lys 100.0 9.6E-38 3.3E-42 289.3 26.3 222 119-347 4-225 (237)
24 4b93_B Ankyrin repeat domain-c 100.0 9.5E-39 3.3E-43 300.8 16.0 224 73-308 6-230 (269)
25 3aji_A 26S proteasome non-ATPa 100.0 1.4E-37 4.8E-42 287.0 22.6 222 77-317 5-226 (231)
26 3aji_A 26S proteasome non-ATPa 100.0 4.9E-37 1.7E-41 283.4 25.1 223 123-352 3-226 (231)
27 1oy3_D Transcription factor in 100.0 1.7E-37 5.9E-42 295.5 21.5 265 29-343 4-269 (282)
28 3eu9_A Huntingtin-interacting 100.0 1.3E-36 4.4E-41 282.1 25.5 231 72-320 3-234 (240)
29 2dzn_A Probable 26S proteasome 100.0 1.1E-36 3.7E-41 280.5 23.8 220 78-317 2-226 (228)
30 1s70_B 130 kDa myosin-binding 100.0 1.6E-37 5.5E-42 298.4 17.6 249 75-352 37-285 (299)
31 2dzn_A Probable 26S proteasome 100.0 1.8E-36 6.3E-41 278.9 21.6 211 126-342 2-218 (228)
32 4b93_B Ankyrin repeat domain-c 100.0 3.4E-37 1.2E-41 290.2 15.8 217 121-344 6-230 (269)
33 1s70_B 130 kDa myosin-binding 100.0 7.6E-37 2.6E-41 293.7 18.4 282 84-393 4-286 (299)
34 2f8y_A Notch homolog 1, transl 100.0 9.6E-36 3.3E-40 273.1 23.2 215 12-253 2-217 (223)
35 3kea_A K1L; tropism, ANK repea 100.0 5.6E-36 1.9E-40 285.1 17.9 218 71-318 24-243 (285)
36 3kea_A K1L; tropism, ANK repea 100.0 1E-35 3.6E-40 283.2 19.8 234 119-374 24-260 (285)
37 2f8y_A Notch homolog 1, transl 100.0 3.1E-35 1.1E-39 269.7 21.6 215 52-287 2-216 (223)
38 1sw6_A Regulatory protein SWI6 100.0 1.1E-36 3.6E-41 296.0 10.9 267 52-341 30-325 (327)
39 3eu9_A Huntingtin-interacting 100.0 5.5E-35 1.9E-39 271.0 21.8 229 30-287 5-235 (240)
40 1sw6_A Regulatory protein SWI6 100.0 1.2E-35 4.3E-40 288.4 12.5 258 10-307 28-327 (327)
41 1ikn_D Protein (I-kappa-B-alph 100.0 4E-35 1.4E-39 271.5 12.4 199 31-252 5-209 (236)
42 2rfa_A Transient receptor pote 100.0 1.1E-33 3.7E-38 261.1 20.7 194 77-287 2-222 (232)
43 2rfa_A Transient receptor pote 100.0 1.9E-33 6.5E-38 259.5 22.3 201 33-253 2-223 (232)
44 1ikn_D Protein (I-kappa-B-alph 100.0 6.7E-35 2.3E-39 270.0 11.2 215 73-302 3-225 (236)
45 2pnn_A Transient receptor pote 100.0 2.5E-33 8.5E-38 265.4 18.9 214 25-253 4-259 (273)
46 3hra_A Ankyrin repeat family p 100.0 2.3E-32 8E-37 246.2 22.3 191 33-249 4-200 (201)
47 2etb_A Transient receptor pote 100.0 4.9E-33 1.7E-37 260.8 17.2 209 33-253 1-247 (256)
48 3hra_A Ankyrin repeat family p 100.0 6.3E-32 2.2E-36 243.4 23.7 193 123-318 2-200 (201)
49 2pnn_A Transient receptor pote 100.0 3.3E-33 1.1E-37 264.6 14.1 220 71-299 6-270 (273)
50 2etb_A Transient receptor pote 100.0 9.9E-33 3.4E-37 258.7 15.3 194 77-287 1-246 (256)
51 4gpm_A Engineered protein OR26 100.0 1.4E-31 4.8E-36 232.7 19.7 157 80-253 6-162 (169)
52 4gpm_A Engineered protein OR26 100.0 4.8E-32 1.6E-36 235.6 15.3 147 52-218 15-161 (169)
53 3jxi_A Vanilloid receptor-rela 100.0 1.7E-31 5.8E-36 250.9 16.6 209 33-253 4-251 (260)
54 3jxi_A Vanilloid receptor-rela 100.0 6.3E-31 2.2E-35 247.0 17.1 194 3-219 7-251 (260)
55 2rfm_A Putative ankyrin repeat 100.0 1.7E-29 5.8E-34 225.7 18.7 164 70-250 27-190 (192)
56 4hbd_A KN motif and ankyrin re 100.0 1.9E-29 6.6E-34 238.6 17.5 192 78-285 76-273 (276)
57 4hbd_A KN motif and ankyrin re 100.0 1.1E-29 3.8E-34 240.3 15.3 194 33-251 75-274 (276)
58 3v30_A DNA-binding protein rfx 100.0 5.1E-29 1.7E-33 218.4 17.7 169 35-230 3-171 (172)
59 2rfm_A Putative ankyrin repeat 100.0 6.2E-29 2.1E-33 222.1 18.5 164 26-216 27-190 (192)
60 1ihb_A P18-INK4C(INK6), cyclin 100.0 3.1E-29 1.1E-33 217.5 15.8 158 77-251 4-161 (162)
61 2aja_A Ankyrin repeat family p 100.0 1.5E-31 5.2E-36 262.0 1.3 265 52-377 77-360 (376)
62 3v31_A Ankyrin repeat family A 100.0 1.2E-28 4.3E-33 214.8 18.4 159 77-252 2-160 (167)
63 2y1l_E Darpin-8.4; hydrolase-i 100.0 1.6E-28 5.5E-33 214.5 18.6 160 74-250 10-169 (169)
64 3v31_A Ankyrin repeat family A 100.0 1.8E-28 6.3E-33 213.7 18.0 161 33-220 2-162 (167)
65 3v30_A DNA-binding protein rfx 100.0 1.3E-28 4.3E-33 215.9 16.3 170 126-299 2-171 (172)
66 1ihb_A P18-INK4C(INK6), cyclin 100.0 1.8E-28 6.3E-33 212.6 16.8 159 125-287 4-162 (162)
67 2vge_A RELA-associated inhibit 100.0 3.7E-31 1.3E-35 242.9 -2.6 198 143-347 2-203 (229)
68 2aja_A Ankyrin repeat family p 100.0 3.6E-31 1.2E-35 259.4 -3.0 278 4-347 68-364 (376)
69 2vge_A RELA-associated inhibit 100.0 5.7E-30 2E-34 234.9 3.6 191 177-376 2-198 (229)
70 1awc_B Protein (GA binding pro 100.0 1.1E-27 3.6E-32 205.6 17.2 150 79-246 3-152 (153)
71 2y1l_E Darpin-8.4; hydrolase-i 100.0 1.8E-27 6.3E-32 207.8 18.9 159 122-284 10-168 (169)
72 3twr_A Tankyrase-2; ankyrin re 100.0 6.2E-28 2.1E-32 209.9 13.4 161 74-251 4-164 (165)
73 1bd8_A P19INK4D CDK4/6 inhibit 100.0 2.1E-27 7.2E-32 204.5 16.5 153 78-249 2-155 (156)
74 1awc_B Protein (GA binding pro 99.9 4.3E-27 1.5E-31 201.8 17.4 151 126-281 2-152 (153)
75 3f6q_A Integrin-linked protein 99.9 1.9E-27 6.6E-32 209.8 15.1 131 121-253 34-164 (179)
76 3twr_A Tankyrase-2; ankyrin re 99.9 1.9E-27 6.4E-32 206.9 14.5 161 122-286 4-164 (165)
77 3f6q_A Integrin-linked protein 99.9 6.4E-27 2.2E-31 206.4 16.1 161 124-287 3-163 (179)
78 1bd8_A P19INK4D CDK4/6 inhibit 99.9 5.8E-27 2E-31 201.7 15.2 154 34-215 2-155 (156)
79 1ycs_B 53BP2, P53BP2; ankyrin 99.9 2.1E-27 7.3E-32 219.7 9.0 181 123-308 2-193 (239)
80 1ycs_B 53BP2, P53BP2; ankyrin 99.9 2.2E-27 7.4E-32 219.7 8.9 182 75-274 2-193 (239)
81 1d9s_A Cyclin-dependent kinase 99.9 1.6E-25 5.4E-30 187.9 13.2 133 69-218 3-136 (136)
82 1bi7_B P16INK4A, MTS1, multipl 99.9 3.4E-25 1.2E-29 190.5 11.0 143 73-233 7-150 (156)
83 1d9s_A Cyclin-dependent kinase 99.9 7.3E-25 2.5E-29 183.8 11.9 131 119-252 5-136 (136)
84 3t8k_A Uncharacterized protein 99.9 4.1E-25 1.4E-29 195.2 8.6 154 78-250 6-177 (186)
85 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.5E-23 5.2E-28 173.0 16.4 126 77-218 1-126 (126)
86 1bi7_B P16INK4A, MTS1, multipl 99.9 2.6E-24 8.9E-29 185.0 11.4 143 120-267 6-149 (156)
87 3t8k_A Uncharacterized protein 99.9 5.1E-25 1.7E-29 194.6 6.7 157 33-218 5-179 (186)
88 2jab_A H10-2-G3; HER2, darpin, 99.9 1.1E-23 3.7E-28 176.6 13.9 123 77-215 13-135 (136)
89 2jab_A H10-2-G3; HER2, darpin, 99.9 2.2E-23 7.4E-28 174.8 14.2 127 122-250 10-136 (136)
90 3ui2_A Signal recognition part 99.9 7.8E-25 2.7E-29 203.0 5.9 169 33-249 14-182 (244)
91 1n0r_A 4ANK, 4 ankyrin repeats 99.9 4.4E-23 1.5E-27 170.2 15.9 126 125-252 1-126 (126)
92 3deo_A Signal recognition part 99.9 1.2E-23 4E-28 186.0 10.3 141 75-249 41-181 (183)
93 3ui2_A Signal recognition part 99.9 1.5E-24 5.1E-29 201.1 4.4 171 77-287 14-185 (244)
94 3c5r_A BARD-1, BRCA1-associate 99.9 1.7E-23 5.9E-28 175.6 7.7 125 74-214 6-130 (137)
95 3deo_A Signal recognition part 99.9 1.1E-22 3.8E-27 179.7 12.6 140 123-284 41-181 (183)
96 3c5r_A BARD-1, BRCA1-associate 99.9 6.2E-23 2.1E-27 172.2 8.7 129 121-251 5-133 (137)
97 2b0o_E UPLC1; arfgap, structur 99.9 5.5E-22 1.9E-26 189.2 15.1 146 77-239 150-298 (301)
98 3aaa_C Myotrophin, protein V-1 99.9 2.4E-22 8.4E-27 165.1 9.6 108 125-234 6-113 (123)
99 2b0o_E UPLC1; arfgap, structur 99.9 5.2E-22 1.8E-26 189.4 12.8 140 126-274 151-298 (301)
100 3aaa_C Myotrophin, protein V-1 99.9 6.7E-22 2.3E-26 162.5 10.6 119 157-278 4-122 (123)
101 3ehr_A Osteoclast-stimulating 99.9 1.9E-22 6.5E-27 184.3 8.1 129 74-218 69-198 (222)
102 3ehr_A Osteoclast-stimulating 99.8 1.4E-21 4.7E-26 178.5 9.0 133 119-253 66-199 (222)
103 1dcq_A PYK2-associated protein 99.8 3.1E-20 1.1E-24 175.0 14.4 126 127-253 131-264 (278)
104 1dcq_A PYK2-associated protein 99.8 1.9E-20 6.7E-25 176.4 12.2 193 74-287 62-263 (278)
105 3jue_A Arfgap with coiled-coil 99.8 4.5E-20 1.5E-24 179.9 13.4 125 124-250 197-324 (368)
106 1n0q_A 3ANK, 3 ankyrin repeats 99.8 6.7E-20 2.3E-24 142.3 11.6 90 126-216 2-91 (93)
107 3lvq_E ARF-GAP with SH3 domain 99.8 1.3E-19 4.4E-24 185.7 17.1 144 77-237 131-277 (497)
108 1n0q_A 3ANK, 3 ankyrin repeats 99.8 1.4E-19 4.8E-24 140.5 12.3 93 159-252 1-93 (93)
109 3lvq_E ARF-GAP with SH3 domain 99.8 1.5E-19 5.2E-24 185.1 15.6 138 125-271 131-276 (497)
110 3jue_A Arfgap with coiled-coil 99.8 1.7E-19 5.8E-24 175.8 13.8 149 156-307 195-348 (368)
111 2l6b_A NR1C; ankyrin, consensu 99.8 7.8E-20 2.7E-24 148.1 6.9 107 74-196 5-111 (115)
112 2l6b_A NR1C; ankyrin, consensu 99.8 3.4E-19 1.2E-23 144.3 8.4 108 121-230 4-111 (115)
113 2zgd_A 3 repeat synthetic anky 99.7 9.9E-17 3.4E-21 128.5 10.7 93 119-212 17-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.7 7.1E-17 2.4E-21 129.3 9.4 94 70-179 16-109 (110)
115 3gvo_A Pumilio 2, pumilio homo 61.9 7 0.00024 37.0 4.4 193 121-316 68-273 (351)
116 3gvo_A Pumilio 2, pumilio homo 55.9 9.7 0.00033 36.0 4.3 27 292-318 292-318 (351)
117 3k49_A MRNA-binding protein PU 55.3 10 0.00035 36.1 4.4 197 121-319 73-287 (369)
118 3k49_A MRNA-binding protein PU 44.8 28 0.00094 33.1 5.5 26 292-317 309-334 (369)
119 3mkq_B Coatomer subunit alpha; 30.0 2.3E+02 0.008 23.4 8.3 130 79-248 9-139 (177)
120 1gp8_A Protein (scaffolding pr 28.6 21 0.00072 20.9 1.0 18 4-21 16-33 (40)
121 3mkq_B Coatomer subunit alpha; 27.9 2.5E+02 0.0086 23.2 7.9 49 125-182 91-140 (177)
122 2lx0_A Membrane fusion protein 24.1 59 0.002 17.2 2.1 15 429-443 6-20 (32)
No 1
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=3.3e-55 Score=445.11 Aligned_cols=355 Identities=25% Similarity=0.331 Sum_probs=252.0
Q ss_pred ChHHHHHHHcCCcchhhhhhhhccccccccCCCCchhhhhhhcccccccCCchhhHHHHHHHHHhCCccccccCCCCCcH
Q 009805 2 EPKLYEAATNGEIEPFNGIAKDNLRSIVTHNNKHTVLHVNIARQSLKNKEGESVSTKFVEQILEICPSLLIQTNAKGDSP 81 (525)
Q Consensus 2 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~g~~~~~~~ll~~~~~~~~~l~~~~~~g~tp 81 (525)
.++||.||..|+.++|++|+++|++++..+..|.||||+|+.. |+.+++++|++. +..++.++..|.||
T Consensus 15 ~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~-------g~~~~v~~Ll~~----g~~~~~~~~~g~t~ 83 (437)
T 1n11_A 15 LTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARA-------GHTEVAKYLLQN----KAKVNAKAKDDQTP 83 (437)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHH-------TCHHHHHHHHHH----TCCSSCCCTTSCCH
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc-------CCHHHHHHHHhC----CCCCCCCCCCCCCH
Confidence 3689999999999999999999999988988999999999999 999999999874 66778899999999
Q ss_pred HHHHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCc
Q 009805 82 LHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFPYSANVNGE 161 (525)
Q Consensus 82 Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~ 161 (525)
||+|+..|+.++|++|++.+++ ++..+..|.||||+|+..|+.+++++|++++.+.. ..+..|.
T Consensus 84 L~~A~~~g~~~~v~~Ll~~ga~---------------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~-~~~~~g~ 147 (437)
T 1n11_A 84 LHCAARIGHTNMVKLLLENNAN---------------PNLATTAGHTPLHIAAREGHVETVLALLEKEASQA-CMTKKGF 147 (437)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCC---------------TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSC-CCCTTSC
T ss_pred HHHHHHCCCHHHHHHHHhCCCC---------------CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCc-CCCCCCC
Confidence 9999999999999999999987 44556666777777777777777777776666654 4455666
Q ss_pred hHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCcccCCCCCCcHHHHHHHcCChh
Q 009805 162 TPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAVNSYAADVVEKLLAKKRHLTRERDDCGWTPLHHSAYLGLKD 241 (525)
Q Consensus 162 tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~ 241 (525)
||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|++.+.+ ++..+..|.||||+|+..|+.+
T Consensus 148 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~ 226 (437)
T 1n11_A 148 TPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGS-PHSPAWNGYTPLHIAAKQNQVE 226 (437)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCC-SCCCCTTCCCHHHHHHHTTCHH
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-CCCcCCCCCCHHHHHHHcCCHH
Confidence 777777777777777777776666666666666777777776667777766666665 4555666666666666666666
Q ss_pred HHHHHhhcCCCcchhcccCCCCcHHHHHHhcCCHHHHHHHHhhCCCccccccCCCCchhHHHHhcCCHHHHHHHhhCccc
Q 009805 242 ITALLLEFDGSSALILDKDRKMTALLMAASQGHESLAGTIIAHYPECYDLVDNGGWNVLHFLMVSLHESKLKRLLKDPLY 321 (525)
Q Consensus 242 ~v~~Ll~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~ll~~~~~ 321 (525)
++++|++++.+. +..+. .|.||||+|+..|+.+++++|++++++ .+..|..|+||||+|+..++.++++.|++.
T Consensus 227 ~~~~Ll~~g~~~-~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~--- 300 (437)
T 1n11_A 227 VARSLLQYGGSA-NAESV-QGVTPLHLAAQEGHAEMVALLLSKQAN-GNLGNKSGLTPLHLVAQEGHVPVADVLIKH--- 300 (437)
T ss_dssp HHHHHHHTTCCT-TCCCT-TCCCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHH---
T ss_pred HHHHHHHcCCCC-CCCCC-CCCCHHHHHHHCCCHHHHHHHHhcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHhC---
Confidence 666666666654 22232 466666666666666666666666665 455666666666666666666666666653
Q ss_pred cccccccCCCCChHHHHHHhcCchhH-HHHHHHhCCCChHHHhccCCChHHHHhhcCCCccchhhhHHHHhhcCCCC
Q 009805 322 KSFIDEKNEMGNTPLHILATLSARTC-NEIVRQIGKGDTQAVNKKKISVKHIELYGCPELQGEIQGLSENIGRGQYP 397 (525)
Q Consensus 322 ~~~in~~d~~G~T~Lh~A~~~~~~~~-~~ll~~~~~~d~~~~n~~g~t~l~~a~~~~~~~~~~~~~~~~~l~~~~~~ 397 (525)
+.+++.+|..|+||||+|+..+...+ +.|++ .++|++.+|..|.||||+|...+ ..+.+..+++.+..|
T Consensus 301 g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~--~gad~n~~~~~g~t~L~~A~~~g-----~~~iv~~Ll~~ga~~ 370 (437)
T 1n11_A 301 GVMVDATTRMGYTPLHVASHYGNIKLVKFLLQ--HQADVNAKTKLGYSPLHQAAQQG-----HTDIVTLLLKNGASP 370 (437)
T ss_dssp TCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHH--TTCCTTCCCTTSCCHHHHHHHTT-----CHHHHHHHHHTTCCS
T ss_pred CccCCCCCCCCCCHHHHHHHcCcHHHHHHHHh--cCCCCCCCCCCCCCHHHHHHHCC-----hHHHHHHHHHCcCCC
Confidence 33466666666666666666664444 55555 56666666666666666666432 444444455544443
No 2
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.6e-54 Score=440.12 Aligned_cols=340 Identities=24% Similarity=0.281 Sum_probs=316.3
Q ss_pred ChHHHHHHHcCCcchhhhhhhhccccccccCCCCchhhhhhhcccccccCCchhhHHHHHHHHHhCCccccccCCCCCcH
Q 009805 2 EPKLYEAATNGEIEPFNGIAKDNLRSIVTHNNKHTVLHVNIARQSLKNKEGESVSTKFVEQILEICPSLLIQTNAKGDSP 81 (525)
Q Consensus 2 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~g~~~~~~~ll~~~~~~~~~l~~~~~~g~tp 81 (525)
.++||.|+..|+.+++++|+++|.+.+.++.+|.||||+|+.. |+.+++++|++. +.+++..+..|.||
T Consensus 48 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~-------g~~~~v~~Ll~~----ga~~~~~~~~g~t~ 116 (437)
T 1n11_A 48 ETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARI-------GHTNMVKLLLEN----NANPNLATTAGHTP 116 (437)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHH-------TCHHHHHHHHHH----TCCTTCCCTTCCCH
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHC-------CCHHHHHHHHhC----CCCCCCCCCCCCcH
Confidence 4689999999999999999999999988998999999999999 999999999874 66778889999999
Q ss_pred HHHHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCc
Q 009805 82 LHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFPYSANVNGE 161 (525)
Q Consensus 82 Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~ 161 (525)
||+|+..|+.+++++|++.+.+ .+..+..|.||||+|+..|+.+++++|+++|++++ ..+..|.
T Consensus 117 L~~A~~~g~~~~v~~Ll~~~~~---------------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~ 180 (437)
T 1n11_A 117 LHIAAREGHVETVLALLEKEAS---------------QACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPN-AAGKNGL 180 (437)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCC---------------SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCSSCC
T ss_pred HHHHHHcCCHHHHHHHHhCCCC---------------CcCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC-CCCCCCC
Confidence 9999999999999999999876 45678899999999999999999999999999976 6788999
Q ss_pred hHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCcccCCCCCCcHHHHHHHcCChh
Q 009805 162 TPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAVNSYAADVVEKLLAKKRHLTRERDDCGWTPLHHSAYLGLKD 241 (525)
Q Consensus 162 tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~ 241 (525)
||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|++.+.+ .+..+..|.||||+|+..|+.+
T Consensus 181 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~ 259 (437)
T 1n11_A 181 TPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGS-ANAESVQGVTPLHLAAQEGHAE 259 (437)
T ss_dssp CHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHH
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHCCCHH
Confidence 999999999999999999999999999999999999999999999999999999988 6888999999999999999999
Q ss_pred HHHHHhhcCCCcchhcccCCCCcHHHHHHhcCCHHHHHHHHhhCCCccccccCCCCchhHHHHhcCCHHHHHHHhhCccc
Q 009805 242 ITALLLEFDGSSALILDKDRKMTALLMAASQGHESLAGTIIAHYPECYDLVDNGGWNVLHFLMVSLHESKLKRLLKDPLY 321 (525)
Q Consensus 242 ~v~~Ll~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~ll~~~~~ 321 (525)
++++|++++.+. ...+. .|.||||+|+..|+.+++++|++++.+ ++.+|..|+||||+|+.+++.+++++|++.
T Consensus 260 ~v~~Ll~~~~~~-~~~~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~--- 333 (437)
T 1n11_A 260 MVALLLSKQANG-NLGNK-SGLTPLHLVAQEGHVPVADVLIKHGVM-VDATTRMGYTPLHVASHYGNIKLVKFLLQH--- 333 (437)
T ss_dssp HHHHHHTTTCCT-TCCCT-TCCCHHHHHHHHTCHHHHHHHHHHTCC-TTCCCSSCCCHHHHHHHSSCSHHHHHHHHT---
T ss_pred HHHHHHhcCCCC-CCCCC-CCCCHHHHHHHcCCHHHHHHHHhCCcc-CCCCCCCCCCHHHHHHHcCcHHHHHHHHhc---
Confidence 999999999887 44444 799999999999999999999999988 788999999999999999999999999985
Q ss_pred cccccccCCCCChHHHHHHhcCchhH-HHHHHHhCCCChHHHhccCCChHHHHhhcC
Q 009805 322 KSFIDEKNEMGNTPLHILATLSARTC-NEIVRQIGKGDTQAVNKKKISVKHIELYGC 377 (525)
Q Consensus 322 ~~~in~~d~~G~T~Lh~A~~~~~~~~-~~ll~~~~~~d~~~~n~~g~t~l~~a~~~~ 377 (525)
++++|.+|..|+||||+|+..+...+ ..|++ .|+|++.+|.+|+||+++|.+.+
T Consensus 334 gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~--~ga~~~~~~~~g~t~l~~A~~~g 388 (437)
T 1n11_A 334 QADVNAKTKLGYSPLHQAAQQGHTDIVTLLLK--NGASPNEVSSDGTTPLAIAKRLG 388 (437)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH--TTCCSCCCCSSSCCHHHHHHHTT
T ss_pred CCCCCCCCCCCCCHHHHHHHCChHHHHHHHHH--CcCCCCCCCCCCCCHHHHHHHcC
Confidence 45699999999999999999987666 77777 89999999999999999999654
No 3
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=5.9e-43 Score=342.27 Aligned_cols=289 Identities=17% Similarity=0.188 Sum_probs=228.0
Q ss_pred CCCchhhhhhhcccccccCCchhhHHHHHHHHHhCCccccccCC-CCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhh
Q 009805 33 NKHTVLHVNIARQSLKNKEGESVSTKFVEQILEICPSLLIQTNA-KGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCC 111 (525)
Q Consensus 33 ~g~t~Lh~A~~~~~~~~~~g~~~~~~~ll~~~~~~~~~l~~~~~-~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~ 111 (525)
+|+|+||.|+++ |+.++|++|++. +.+++.++. .|.||||+|+..|+.++|++|+++|++
T Consensus 24 ~~~t~L~~Av~~-------g~~~~V~~LL~~----Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~-------- 84 (337)
T 4g8k_A 24 EDNHLLIKAVQN-------EDVDLVQQLLEG----GANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD-------- 84 (337)
T ss_dssp HHHHHHHHHHHT-------TCHHHHHHHHHH----TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC--------
T ss_pred CCChHHHHHHHc-------CCHHHHHHHHHC----CCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCc--------
Confidence 567888888888 888888888764 566666654 488888888888888888888888877
Q ss_pred hhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCC--
Q 009805 112 AKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFPYSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHD-- 189 (525)
Q Consensus 112 ~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~-- 189 (525)
++.++..+.++++.++..+...++..+++.+++++ ..+..|.||||+|+..|+.+++++|+++|++++..
T Consensus 85 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~ 156 (337)
T 4g8k_A 85 -------PVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVN-ECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRK 156 (337)
T ss_dssp -------TTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTT-CBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCC
T ss_pred -------hhhhccCCCchhHHHHhcccchhhHHhhhccchhh-hhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhc
Confidence 55678888888888888888888888888888876 67788888888888888888888888888777643
Q ss_pred --------CCCCCcHHHHHHHcCCHHHHHHHHHh-cCcCcccCCCCCCcHHHHHHHcCC----hhHHHHHhhcCCCcchh
Q 009805 190 --------GPNGKTALHAAVNSYAADVVEKLLAK-KRHLTRERDDCGWTPLHHSAYLGL----KDITALLLEFDGSSALI 256 (525)
Q Consensus 190 --------~~~g~t~L~~A~~~~~~~~~~~Ll~~-~~~~~~~~d~~g~tpL~~A~~~g~----~~~v~~Ll~~~~~~~~~ 256 (525)
+..|.||||+|+..|+.+++++|+++ +.+ ++.+|..|.||++.++..+. .+++++|+++|+++ +.
T Consensus 157 ~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad-~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~-n~ 234 (337)
T 4g8k_A 157 TKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGAD-VNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADV-NV 234 (337)
T ss_dssp CC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCC-TTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCT-TC
T ss_pred cccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCC-cCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCC-CC
Confidence 44688889888888888888888865 555 67888888888888776554 35788888888876 44
Q ss_pred cccCCCCcHHHHHHhcCCHHHHHHHHhhCCCccccccCCCCchhHHHHhcCCHHHHHHHhhCccccccccccCCCCChHH
Q 009805 257 LDKDRKMTALLMAASQGHESLAGTIIAHYPECYDLVDNGGWNVLHFLMVSLHESKLKRLLKDPLYKSFIDEKNEMGNTPL 336 (525)
Q Consensus 257 ~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~ll~~~~~~~~in~~d~~G~T~L 336 (525)
.+. .|.||||+|+..|+.++++.|++.....++.+|.+|+||||+|++.|+.+++++|++.+ +++| +.|||
T Consensus 235 ~d~-~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~G---Ad~n-----~~~~L 305 (337)
T 4g8k_A 235 RGE-RGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRG---ASTD-----CGDLV 305 (337)
T ss_dssp CCG-GGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTS---CSST-----TCCHH
T ss_pred cCC-CCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCC---CCCC-----CCCHH
Confidence 444 68889999999999888888888654447888888999999999999988888888853 3344 44689
Q ss_pred HHHHhcCchhH-HHHHHHhCCCChHH
Q 009805 337 HILATLSARTC-NEIVRQIGKGDTQA 361 (525)
Q Consensus 337 h~A~~~~~~~~-~~ll~~~~~~d~~~ 361 (525)
|+|++.+...+ +.|++ .|+|+|.
T Consensus 306 ~~A~~~~~~~iv~~Ll~--~GA~~d~ 329 (337)
T 4g8k_A 306 MTARRNYDHSLVKVLLS--HGAKEDF 329 (337)
T ss_dssp HHHHHTTCHHHHHHHHH--TTCCC--
T ss_pred HHHHHcCCHHHHHHHHH--CcCCCCC
Confidence 99888876555 77777 6666654
No 4
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=2e-42 Score=338.49 Aligned_cols=294 Identities=20% Similarity=0.204 Sum_probs=253.8
Q ss_pred cCCCCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcCccC-CCChHhHHHHHcCCHHHHHHHHhcCCCC
Q 009805 74 TNAKGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLTNE-EENTALHEAVQCGNLDAVKILMEAGPNF 152 (525)
Q Consensus 74 ~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~~~-~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~ 152 (525)
.+.+|.||||.|++.|+.++|++||+.|++ ++.++. .|.||||+|+..|+.++|++|+++|+++
T Consensus 21 ~~~~~~t~L~~Av~~g~~~~V~~LL~~Gad---------------vn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~ 85 (337)
T 4g8k_A 21 AAVEDNHLLIKAVQNEDVDLVQQLLEGGAN---------------VNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADP 85 (337)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHTCC---------------TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHCCCC---------------CCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCch
Confidence 445678999999999999999999999988 555654 5999999999999999999999999998
Q ss_pred CCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCc---------ccC
Q 009805 153 PYSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAVNSYAADVVEKLLAKKRHLT---------RER 223 (525)
Q Consensus 153 ~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~---------~~~ 223 (525)
+ ..+..+.+|++.++..+...++..+++.+++++..|..|.||||+|+..++.+++++|++.+++.. ...
T Consensus 86 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~ 164 (337)
T 4g8k_A 86 V-LRKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERL 164 (337)
T ss_dssp T-CCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----C
T ss_pred h-hhccCCCchhHHHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccc
Confidence 7 678899999999999999999999999999999999999999999999999999999999987742 234
Q ss_pred CCCCCcHHHHHHHcCChhHHHHHhhc-CCCcchhcccCCCCcHHHHHHhcCC----HHHHHHHHhhCCCccccccCCCCc
Q 009805 224 DDCGWTPLHHSAYLGLKDITALLLEF-DGSSALILDKDRKMTALLMAASQGH----ESLAGTIIAHYPECYDLVDNGGWN 298 (525)
Q Consensus 224 d~~g~tpL~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~~g~tpL~~A~~~g~----~~~v~~Ll~~~~~~~~~~d~~g~t 298 (525)
+..|.||||+|+..|+.+++++|+++ |.++ +..+. .|.||+|.++..+. ..++++|++++++ ++.+|..|+|
T Consensus 165 ~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~-n~~d~-~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad-~n~~d~~g~t 241 (337)
T 4g8k_A 165 RKGGATALMDAAEKGHVEVLKILLDEMGADV-NACDN-MGRNALIHALLSSDDSDVEAITHLLLDHGAD-VNVRGERGKT 241 (337)
T ss_dssp TTCSCCHHHHHHHHTCHHHHHHHHHHSCCCT-TCCCT-TSCCHHHHHHHHSCTTTHHHHHHHHHHTTCC-TTCCCGGGCC
T ss_pred cCCCCcHHHHHHHCCCHHHHHHHHhccCCCc-CccCC-CCCcHHHHHHHHcCcccHHHHHHHHHHCCCC-CCCcCCCCCC
Confidence 56789999999999999999999964 6665 55555 79999998886554 4688999999998 7889999999
Q ss_pred hhHHHHhcCCHHHHHHHhhCccccccccccCCCCChHHHHHHhcCchhH-HHHHHHhCCCChHHHhccCCChHHHHhhcC
Q 009805 299 VLHFLMVSLHESKLKRLLKDPLYKSFIDEKNEMGNTPLHILATLSARTC-NEIVRQIGKGDTQAVNKKKISVKHIELYGC 377 (525)
Q Consensus 299 ~Lh~A~~~~~~~~~~~ll~~~~~~~~in~~d~~G~T~Lh~A~~~~~~~~-~~ll~~~~~~d~~~~n~~g~t~l~~a~~~~ 377 (525)
|||+|+..++.++++.|++. .+.++|.+|.+|+||||+|++.|...+ +.|++ .|+|++. .+||++|.+.+
T Consensus 242 ~L~~a~~~~~~~~v~~Ll~~--~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~--~GAd~n~-----~~~L~~A~~~~ 312 (337)
T 4g8k_A 242 PLILAVEKKHLGLVQRLLEQ--EHIEINDTDSDGKTALLLAVELKLKKIAELLCK--RGASTDC-----GDLVMTARRNY 312 (337)
T ss_dssp HHHHHHHTTCHHHHHHHHTS--TTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHT--TSCSSTT-----CCHHHHHHHTT
T ss_pred HHHHHHHhhhhHHHHHHHHh--cCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHH--CCCCCCC-----CCHHHHHHHcC
Confidence 99999999999999999874 346799999999999999999997766 77777 7887754 57999999654
Q ss_pred CCccchhhhHHHHhhcCCCCCcc
Q 009805 378 PELQGEIQGLSENIGRGQYPKGV 400 (525)
Q Consensus 378 ~~~~~~~~~~~~~l~~~~~~~~~ 400 (525)
..+.+..+++.|..|...
T Consensus 313 -----~~~iv~~Ll~~GA~~d~~ 330 (337)
T 4g8k_A 313 -----DHSLVKVLLSHGAKEDFH 330 (337)
T ss_dssp -----CHHHHHHHHHTTCCC---
T ss_pred -----CHHHHHHHHHCcCCCCCC
Confidence 677888899998776543
No 5
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=2.7e-43 Score=346.59 Aligned_cols=308 Identities=16% Similarity=0.169 Sum_probs=262.2
Q ss_pred hhhhccccccccCCCCchhhhhhhcccccccCCchhhHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCChhHHHHHHH
Q 009805 20 IAKDNLRSIVTHNNKHTVLHVNIARQSLKNKEGESVSTKFVEQILEICPSLLIQTNAKGDSPLHAAAKCGRPAVVKVLIE 99 (525)
Q Consensus 20 ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~g~~~~~~~ll~~~~~~~~~l~~~~~~g~tpLh~A~~~g~~~~v~~Ll~ 99 (525)
+.+.+.+...++..+.++||.|+.. |+.+.++.++ ...+..++.+|..|.||||+|+..|+.++|++|++
T Consensus 10 l~~~~~~~~~~~~~~~~~L~~A~~~-------g~~~~v~~ll---~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~ 79 (351)
T 3utm_A 10 LADPSAKAVLTGEYKKDELLEAARS-------GNEEKLMALL---TPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQ 79 (351)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHH-------TCHHHHHHHC---CTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred ccCCceeeeeeccccchhHHHHHHc-------CCHHHHHHHH---HhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 4444566666676889999999999 9999999884 45677788899999999999999999999999999
Q ss_pred hhhcCChhHhhhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCchHHHHHHHcCCHHHHHHH
Q 009805 100 FAKKQPTAMKCCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFPYSANVNGETPLYMAAARGSKKMVAEI 179 (525)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~L 179 (525)
.+.+ ++.+|..|.||||+|+..|+.+++++|+++|++++ ..+..|.||||+|+..|+.+++++|
T Consensus 80 ~g~~---------------~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~L 143 (351)
T 3utm_A 80 HGAD---------------VHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVN-AMDLWQFTPLHEAASKNRVEVCSLL 143 (351)
T ss_dssp TTCC---------------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred cCCC---------------CCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 9887 66789999999999999999999999999999987 6788999999999999999999999
Q ss_pred HHhcCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCcccCCCCCCcHHHHHHHcCChhHHHHHhhcCCCcchhccc
Q 009805 180 LEKCSSAAHDGPNGKTALHAAVNSYAADVVEKLLAKKRHLTRERDDCGWTPLHHSAYLGLKDITALLLEFDGSSALILDK 259 (525)
Q Consensus 180 l~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~ 259 (525)
+++|++++..+..|.+|+++|+..+..+.+.+.... .++..++..+..+.++.++...... ...+
T Consensus 144 l~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~- 208 (351)
T 3utm_A 144 LSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKG-------------HSLLQAAREADLAKVKKTLALEIIN-FKQP- 208 (351)
T ss_dssp HHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHH-------------HHHHHHHHTTCHHHHHHHTTTCCTT-CCCT-
T ss_pred HHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcc-------------cHHHHHHHhccHHHHHHHHHhhccc-ccCC-
Confidence 999999999999999999999888777777765542 4577788888888888888765543 2223
Q ss_pred CCCCcHHHHHHhc---CCHHHHHHHHhhCCCccccccCCCCchhHHHHhcCCHHHHHHHhhCccccccccccCCCCChHH
Q 009805 260 DRKMTALLMAASQ---GHESLAGTIIAHYPECYDLVDNGGWNVLHFLMVSLHESKLKRLLKDPLYKSFIDEKNEMGNTPL 336 (525)
Q Consensus 260 ~~g~tpL~~A~~~---g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~ll~~~~~~~~in~~d~~G~T~L 336 (525)
..|.||||+|+.. +..+++++|++.+.+ ++.+|..|+||||+|+..++.+++++|++. ++++|.+|..|+|||
T Consensus 209 ~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~---ga~~n~~d~~g~t~L 284 (351)
T 3utm_A 209 QSHETALHCAVASLHPKRKQVAELLLRKGAN-VNEKNKDFMTPLHVAAERAHNDVMEVLHKH---GAKMNALDSLGQTAL 284 (351)
T ss_dssp TTCCCHHHHHHHCCSTTHHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTSCCHH
T ss_pred CCCCCHHHHHHHHhCccHHHHHHHHHHcCCC-cCCcCCCCCCHHHHHHHcCCHHHHHHHHHC---CCCCCCcCCCCCCHH
Confidence 3688999999988 557899999999888 678889999999999999999999999984 456888999999999
Q ss_pred HHHHhcCchhH-HHHHHHhCCCChHHHhccCCChHHHHh
Q 009805 337 HILATLSARTC-NEIVRQIGKGDTQAVNKKKISVKHIEL 374 (525)
Q Consensus 337 h~A~~~~~~~~-~~ll~~~~~~d~~~~n~~g~t~l~~a~ 374 (525)
|+|+..+...+ ..|++ .|+|++.+|..|+||+++|.
T Consensus 285 ~~A~~~~~~~~v~~Ll~--~gad~~~~~~~g~tal~~a~ 321 (351)
T 3utm_A 285 HRAALAGHLQTCRLLLS--YGSDPSIISLQGFTAAQMGN 321 (351)
T ss_dssp HHHHHHTCHHHHHHHHH--TTCCTTCCCTTSCCHHHHSC
T ss_pred HHHHHcCcHHHHHHHHH--cCCCCCCcCCCCCChhhhhh
Confidence 99999886665 77777 78899999999999999985
No 6
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=6.2e-42 Score=336.84 Aligned_cols=320 Identities=20% Similarity=0.174 Sum_probs=263.6
Q ss_pred hHHHHHHHcCCcchhhhhhhh-ccccccccCCCCchhhhhhhcccccccCCchhhHHHHHHHHHhCCccccccCCCCCcH
Q 009805 3 PKLYEAATNGEIEPFNGIAKD-NLRSIVTHNNKHTVLHVNIARQSLKNKEGESVSTKFVEQILEICPSLLIQTNAKGDSP 81 (525)
Q Consensus 3 ~~L~~A~~~g~~~~v~~ll~~-~~~~~~~~~~g~t~Lh~A~~~~~~~~~~g~~~~~~~ll~~~~~~~~~l~~~~~~g~tp 81 (525)
++|+.||+.|+.+.+++++.. +.+.+.++..|.||||+|+.. |+.+++++|++. +.+++.+|..|.||
T Consensus 26 ~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~-------g~~~~v~~Ll~~----g~~~~~~~~~g~t~ 94 (351)
T 3utm_A 26 DELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGY-------NRVRIVQLLLQH----GADVHAKDKGGLVP 94 (351)
T ss_dssp HHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHT-------TCHHHHHHHHHT----TCCTTCCCTTCCCH
T ss_pred hhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHc-------CCHHHHHHHHHc----CCCCCccCCCCCcH
Confidence 689999999999999999886 888888888999999999999 999999999773 67788899999999
Q ss_pred HHHHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCc
Q 009805 82 LHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFPYSANVNGE 161 (525)
Q Consensus 82 Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~ 161 (525)
||+|+..|+.+++++|++.+++ ++..|..|.||||+|+..|+.+++++|+++|+++. ..+..|.
T Consensus 95 L~~A~~~g~~~iv~~Ll~~g~~---------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~ 158 (351)
T 3utm_A 95 LHNACSYGHYEVTELLLKHGAC---------------VNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPT-LVNCHGK 158 (351)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC---------------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSC
T ss_pred HHHHHHCCCHHHHHHHHHCCCC---------------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc-cccCCCC
Confidence 9999999999999999999987 66789999999999999999999999999999976 6788999
Q ss_pred hHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCcccCCCCCCcHHHHHHHc---C
Q 009805 162 TPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAVNSYAADVVEKLLAKKRHLTRERDDCGWTPLHHSAYL---G 238 (525)
Q Consensus 162 tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~~---g 238 (525)
+|+++|+..+..+.+++.... .++..++..++.+.++.++..... ....+..|.||||+|+.. +
T Consensus 159 ~~l~~a~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~t~L~~A~~~~~~~ 225 (351)
T 3utm_A 159 SAVDMAPTPELRERLTYEFKG------------HSLLQAAREADLAKVKKTLALEII-NFKQPQSHETALHCAVASLHPK 225 (351)
T ss_dssp CHHHHCSSHHHHHHHHHHHHH------------HHHHHHHHTTCHHHHHHHTTTCCT-TCCCTTTCCCHHHHHHHCCSTT
T ss_pred cchHHHhhhhhHHHHHhhhcc------------cHHHHHHHhccHHHHHHHHHhhcc-cccCCCCCCCHHHHHHHHhCcc
Confidence 999999988888888877643 468888888999999888887665 455778899999999998 4
Q ss_pred ChhHHHHHhhcCCCcchhcccCCCCcHHHHHHhcCCHHHHHHHHhhCCCccccccCCCCchhHHHHhcCCHHHHHHHhhC
Q 009805 239 LKDITALLLEFDGSSALILDKDRKMTALLMAASQGHESLAGTIIAHYPECYDLVDNGGWNVLHFLMVSLHESKLKRLLKD 318 (525)
Q Consensus 239 ~~~~v~~Ll~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~ll~~ 318 (525)
..+++++|++.+.+. +..+. .|.||||+|+..|+.+++++|++++++ ++.+|..|+||||+|+..++.+++++|++.
T Consensus 226 ~~~~~~~Ll~~g~~~-~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ 302 (351)
T 3utm_A 226 RKQVAELLLRKGANV-NEKNK-DFMTPLHVAAERAHNDVMEVLHKHGAK-MNALDSLGQTALHRAALAGHLQTCRLLLSY 302 (351)
T ss_dssp HHHHHHHHHHTTCCT-TCCCT-TCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCc-CCcCC-CCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHc
Confidence 578999999999887 44454 789999999999999999999999988 788899999999999999999999999985
Q ss_pred ccccccccccCCCCChHHHHHHhcCchhHHHHHHHhCCCChHHHhccCCChHHHHhhc
Q 009805 319 PLYKSFIDEKNEMGNTPLHILATLSARTCNEIVRQIGKGDTQAVNKKKISVKHIELYG 376 (525)
Q Consensus 319 ~~~~~~in~~d~~G~T~Lh~A~~~~~~~~~~ll~~~~~~d~~~~n~~g~t~l~~a~~~ 376 (525)
+++++.+|..|+||||+|. ..+..++.... ......+.+++..|.+.
T Consensus 303 ---gad~~~~~~~g~tal~~a~----~~~~~~l~~~~----~~~~~~~~~~l~~A~~~ 349 (351)
T 3utm_A 303 ---GSDPSIISLQGFTAAQMGN----EAVQQILSEST----PMRTSDVDYRLLEASKA 349 (351)
T ss_dssp ---TCCTTCCCTTSCCHHHHSC----HHHHHHHHHC----------------------
T ss_pred ---CCCCCCcCCCCCChhhhhh----HHHHHHHHhcc----ccccCcceeehhhhhcc
Confidence 4568999999999999983 33433333222 23455677777777654
No 7
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=5.2e-42 Score=327.05 Aligned_cols=263 Identities=22% Similarity=0.250 Sum_probs=237.1
Q ss_pred CCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcCc-cCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCC
Q 009805 77 KGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLT-NEEENTALHEAVQCGNLDAVKILMEAGPNFPYS 155 (525)
Q Consensus 77 ~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~-~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~ 155 (525)
+|.||||.|++.|+.+++++|++.+.+ ++.. +..|.||||+|+..|+.+++++|+++|++++ .
T Consensus 4 ~g~~~L~~A~~~g~~~~v~~Ll~~g~~---------------~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~ 67 (285)
T 1wdy_A 4 EDNHLLIKAVQNEDVDLVQQLLEGGAN---------------VNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPV-L 67 (285)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTCC---------------TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-C
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCC---------------cccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCc-c
Confidence 578999999999999999999999877 3444 7889999999999999999999999999976 6
Q ss_pred CCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCcccC----------CC
Q 009805 156 ANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAVNSYAADVVEKLLAKKRHLTRER----------DD 225 (525)
Q Consensus 156 ~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~----------d~ 225 (525)
.+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|++.+.+. +.. +.
T Consensus 68 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~~~~~~~~~~ 146 (285)
T 1wdy_A 68 RKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANV-NLRRKTKEDQERLRK 146 (285)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCCCCHHHHHTTC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCc-ccccccHHHHHhhcc
Confidence 7889999999999999999999999999999999999999999999999999999999999884 444 77
Q ss_pred CCCcHHHHHHHcCChhHHHHHhhc-CCCcchhcccCCCCcHHHHHHhcCC----HHHHHHHHhhCCCccccccCCCCchh
Q 009805 226 CGWTPLHHSAYLGLKDITALLLEF-DGSSALILDKDRKMTALLMAASQGH----ESLAGTIIAHYPECYDLVDNGGWNVL 300 (525)
Q Consensus 226 ~g~tpL~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~~g~tpL~~A~~~g~----~~~v~~Ll~~~~~~~~~~d~~g~t~L 300 (525)
.|.||||+|+..|+.+++++|++. +.+. ...+. .|.||||.|+..++ .+++++|++++++ ++.+|..|+|||
T Consensus 147 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~-~~~~~-~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~-~~~~~~~g~t~L 223 (285)
T 1wdy_A 147 GGATALMDAAEKGHVEVLKILLDEMGADV-NACDN-MGRNALIHALLSSDDSDVEAITHLLLDHGAD-VNVRGERGKTPL 223 (285)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHTSCCCT-TCCCT-TSCCHHHHHHHCSCTTTHHHHHHHHHHTTCC-SSCCCTTSCCHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHhcCCCC-CccCC-CCCCHHHHHHHccccchHHHHHHHHHHcCCC-CCCcCCCCCcHH
Confidence 899999999999999999999987 6665 44455 79999999999999 8999999999998 788999999999
Q ss_pred HHHHhcCCHHHHHHHhhCccccccccccCCCCChHHHHHHhcCchhH-HHHHHHhCCCChHHHh
Q 009805 301 HFLMVSLHESKLKRLLKDPLYKSFIDEKNEMGNTPLHILATLSARTC-NEIVRQIGKGDTQAVN 363 (525)
Q Consensus 301 h~A~~~~~~~~~~~ll~~~~~~~~in~~d~~G~T~Lh~A~~~~~~~~-~~ll~~~~~~d~~~~n 363 (525)
|+|+..++.++++.|++. .+.+++.+|..|+||||+|++.+...+ ..|++ .|+|++.+|
T Consensus 224 ~~A~~~~~~~~v~~Ll~~--~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~--~Ga~~~~~d 283 (285)
T 1wdy_A 224 ILAVEKKHLGLVQRLLEQ--EHIEINDTDSDGKTALLLAVELKLKKIAELLCK--RGASTDCGD 283 (285)
T ss_dssp HHHHHTTCHHHHHHHHHS--SSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH--HSSCSCCSS
T ss_pred HHHHHcCCHHHHHHHHhc--cCCCccccCCCCCcHHHHHHHcCcHHHHHHHHH--cCCCCCccc
Confidence 999999999999999983 235689999999999999999987766 77888 778777665
No 8
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.5e-41 Score=323.90 Aligned_cols=263 Identities=19% Similarity=0.227 Sum_probs=172.1
Q ss_pred CCCchhhhhhhcccccccCCchhhHHHHHHHHHhCCcccccc-CCCCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhh
Q 009805 33 NKHTVLHVNIARQSLKNKEGESVSTKFVEQILEICPSLLIQT-NAKGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCC 111 (525)
Q Consensus 33 ~g~t~Lh~A~~~~~~~~~~g~~~~~~~ll~~~~~~~~~l~~~-~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~ 111 (525)
+|.||||.|++. |+.+++++|++ . +..++.. +..|.||||+|+..|+.+++++|++.+.+
T Consensus 4 ~g~~~L~~A~~~-------g~~~~v~~Ll~---~-g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-------- 64 (285)
T 1wdy_A 4 EDNHLLIKAVQN-------EDVDLVQQLLE---G-GANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD-------- 64 (285)
T ss_dssp HHHHHHHHHHHT-------TCHHHHHHHHH---T-TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC--------
T ss_pred ccchHHHHHHHc-------CCHHHHHHHHH---c-CCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC--------
Confidence 355667777777 77777776654 2 2333333 55666777777777777777777766655
Q ss_pred hhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCC--
Q 009805 112 AKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFPYSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHD-- 189 (525)
Q Consensus 112 ~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~-- 189 (525)
++.+|..|.||||+|+..|+.+++++|+++|++++ ..+..|.||||+|+..|+.+++++|+++|++++..
T Consensus 65 -------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 136 (285)
T 1wdy_A 65 -------PVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVN-ECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRK 136 (285)
T ss_dssp -------TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT-CBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCC
T ss_pred -------CcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-ccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccc
Confidence 44556667777777777777777777777766654 45666677777777777777777777777666655
Q ss_pred --------CCCCCcHHHHHHHcCCHHHHHHHHHh-cCcCcccCCCCCCcHHHHHHHcCC----hhHHHHHhhcCCCcchh
Q 009805 190 --------GPNGKTALHAAVNSYAADVVEKLLAK-KRHLTRERDDCGWTPLHHSAYLGL----KDITALLLEFDGSSALI 256 (525)
Q Consensus 190 --------~~~g~t~L~~A~~~~~~~~~~~Ll~~-~~~~~~~~d~~g~tpL~~A~~~g~----~~~v~~Ll~~~~~~~~~ 256 (525)
+..|.||||.|+..|+.+++++|++. +.+ .+..|..|.||||+|+..++ .+++++|+++|.+. +.
T Consensus 137 ~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~-~~ 214 (285)
T 1wdy_A 137 TKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGAD-VNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADV-NV 214 (285)
T ss_dssp CCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCC-TTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCS-SC
T ss_pred cHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCC-CCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCC-CC
Confidence 55666777777777777777777766 444 56666667777777777666 66777777766665 33
Q ss_pred cccCCCCcHHHHHHhcCCHHHHHHHHh-hCCCccccccCCCCchhHHHHhcCCHHHHHHHhhCccccccccccC
Q 009805 257 LDKDRKMTALLMAASQGHESLAGTIIA-HYPECYDLVDNGGWNVLHFLMVSLHESKLKRLLKDPLYKSFIDEKN 329 (525)
Q Consensus 257 ~~~~~g~tpL~~A~~~g~~~~v~~Ll~-~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~ll~~~~~~~~in~~d 329 (525)
.+. .|.||||+|+..|+.+++++|++ .+.+ ++.+|..|+||||+|+..++.+++++|++. +++++.+|
T Consensus 215 ~~~-~g~t~L~~A~~~~~~~~v~~Ll~~~g~~-~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~---Ga~~~~~d 283 (285)
T 1wdy_A 215 RGE-RGKTPLILAVEKKHLGLVQRLLEQEHIE-INDTDSDGKTALLLAVELKLKKIAELLCKR---GASTDCGD 283 (285)
T ss_dssp CCT-TSCCHHHHHHHTTCHHHHHHHHHSSSCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHH---SSCSCCSS
T ss_pred cCC-CCCcHHHHHHHcCCHHHHHHHHhccCCC-ccccCCCCCcHHHHHHHcCcHHHHHHHHHc---CCCCCccc
Confidence 333 56677777777777777777776 4444 566677777777777777777777777763 33455554
No 9
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=1.9e-42 Score=342.99 Aligned_cols=308 Identities=17% Similarity=0.149 Sum_probs=221.8
Q ss_pred ChHHHHHHHcCCcchhhhhhhhccccccccCCCCchhhhhhhcccccccCCchhhHHHHHHHHHhCCccccccCCCCCcH
Q 009805 2 EPKLYEAATNGEIEPFNGIAKDNLRSIVTHNNKHTVLHVNIARQSLKNKEGESVSTKFVEQILEICPSLLIQTNAKGDSP 81 (525)
Q Consensus 2 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~g~~~~~~~ll~~~~~~~~~l~~~~~~g~tp 81 (525)
.++|..|+..|+.+.++.+++...... .-.++++-+... |+.+++++++. ..++..|.||
T Consensus 38 ~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-------g~~~~~~~~~~---------~~~~~~g~t~ 97 (373)
T 2fo1_E 38 QHSLLEASYDGYIKRQRNELQHYSLYP----NPQGYGNGNDFL-------GDFNHTNLQIP---------TEPEPESPIK 97 (373)
T ss_dssp ----------------------------------------------------------------------------CCCH
T ss_pred ccccccccCCccccchhhhhhhhcccc----CccccCCCCCcc-------ccccccccccc---------cCCCCCCccH
Confidence 467888888899998888887643321 223456667777 88888877633 2468899999
Q ss_pred HHHHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcCcc-CCCChHhHHHHHcCCHHHHHHHH--------hcCCCC
Q 009805 82 LHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLTN-EEENTALHEAVQCGNLDAVKILM--------EAGPNF 152 (525)
Q Consensus 82 Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~~-~~g~t~Lh~A~~~g~~~~v~~Ll--------~~~~~~ 152 (525)
||+|+..+ .+++++|+.. + ++.+| ..|.||||+|+..|+.+++++|+ +.|+++
T Consensus 98 L~~Aa~~~-~~~~~~L~~~--~---------------~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~v 159 (373)
T 2fo1_E 98 LHTEAAGS-YAITEPITRE--S---------------VNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADV 159 (373)
T ss_dssp HHHHHHSS-SCCCSCCSTT--T---------------TTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCT
T ss_pred HHHHhcCC-chHHHHhccc--c---------------ccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCC
Confidence 99999955 4788777542 2 45667 78999999999999998877776 789998
Q ss_pred CCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhc---CcCcccCCCCCCc
Q 009805 153 PYSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAVNSYAADVVEKLLAKK---RHLTRERDDCGWT 229 (525)
Q Consensus 153 ~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~---~~~~~~~d~~g~t 229 (525)
+ ..|..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++.+ .+ .+..|..|.|
T Consensus 160 n-~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~-~~~~d~~g~t 237 (373)
T 2fo1_E 160 N-AMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGD-IEELDRNGMT 237 (373)
T ss_dssp T-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHT-TSCCCTTSCC
T ss_pred c-CCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccC-hhhcCCCCCC
Confidence 7 67889999999999999999999999999999999999999999999999999999999987 44 6788999999
Q ss_pred HHHHHHHcC---ChhHHHHHhhcCCCcchh------cccCCCCcHHHHHHhcCCHHHHHHHHhhCCCccccccCCCCchh
Q 009805 230 PLHHSAYLG---LKDITALLLEFDGSSALI------LDKDRKMTALLMAASQGHESLAGTIIAHYPECYDLVDNGGWNVL 300 (525)
Q Consensus 230 pL~~A~~~g---~~~~v~~Ll~~~~~~~~~------~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~L 300 (525)
|||+|+..+ +.+++++|+++|.+.... ..+..|.||||+|+..|+.+++++|+++++..++.+|..|+|||
T Consensus 238 ~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL 317 (373)
T 2fo1_E 238 ALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPI 317 (373)
T ss_dssp HHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHH
T ss_pred HHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHH
Confidence 999999998 899999999999887431 11237899999999999999999999998555899999999999
Q ss_pred HHHHhcCCHHHHHHHhhCccccccccccCCCCChHHHHHHhcCchhH-HHHHH
Q 009805 301 HFLMVSLHESKLKRLLKDPLYKSFIDEKNEMGNTPLHILATLSARTC-NEIVR 352 (525)
Q Consensus 301 h~A~~~~~~~~~~~ll~~~~~~~~in~~d~~G~T~Lh~A~~~~~~~~-~~ll~ 352 (525)
|+|+..|+.+++++|++. +++++.+|..|+||||+|+..+...+ ..|++
T Consensus 318 ~~A~~~g~~~iv~~Ll~~---gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~ 367 (373)
T 2fo1_E 318 MLAAQEGRIEVVMYLIQQ---GASVEAVDATDHTARQLAQANNHHNIVDIFDR 367 (373)
T ss_dssp HHHHHHTCHHHHHHHHHT---TCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHHHc---CCCccCCCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 999999999999999995 46699999999999999999997777 55554
No 10
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=9.1e-41 Score=314.30 Aligned_cols=243 Identities=21% Similarity=0.211 Sum_probs=185.0
Q ss_pred CCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCC
Q 009805 77 KGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFPYSA 156 (525)
Q Consensus 77 ~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~ 156 (525)
+|.||||+|+..|+.+++++|++.+.+ ++.+|.+|.||||+|+..|+.+++++|+++|++++ ..
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~---------------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~ 65 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWA---------------VNIITADHVSPLHEACLGGHLSCVKILLKHGAQVN-GV 65 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCC---------------SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT-CC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCC---------------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-CC
Confidence 578888888888888888888888766 55678888888888888888888888888888876 66
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCcccCCCCCCcHHHHHHH
Q 009805 157 NVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAVNSYAADVVEKLLAKKRHLTRERDDCGWTPLHHSAY 236 (525)
Q Consensus 157 ~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~ 236 (525)
+..|.||||+|+..|+.+++++|+++|++++. +..|.||||+|+..|+.+++++|++.+++ ++.+|..|.||||+|+.
T Consensus 66 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~ 143 (261)
T 2xai_A 66 TADWHTPLFNACVSGSWDCVNLLLQHGASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGN-IDHKISHLGTPLYLACE 143 (261)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCBTTTBCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCC-CCcCCCCCCCHHHHHHH
Confidence 77888888888888888888888888887764 34588888888888888888888888877 56777788888888888
Q ss_pred cCChhHHHHHhhcCCCcchhcccCCCCcHHHHHHhcCCHHHHHHHHhhCCCccccccCCCCchhHHHHhcCCHHHHHHHh
Q 009805 237 LGLKDITALLLEFDGSSALILDKDRKMTALLMAASQGHESLAGTIIAHYPECYDLVDNGGWNVLHFLMVSLHESKLKRLL 316 (525)
Q Consensus 237 ~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~ll 316 (525)
.|+.+++++|+++|.+.. . +. .|.||||+|+..|+.+++++|++++++ ++.+|.+|+||||+|+.++. +++.|+
T Consensus 144 ~~~~~~v~~Ll~~g~~~~-~-~~-~g~t~Lh~A~~~~~~~~v~~Ll~~gad-~~~~d~~g~tpl~~A~~~~~--~~~~ll 217 (261)
T 2xai_A 144 NQQRACVKKLLESGADVN-Q-GK-GQDSPLHAVARTASEELACLLMDFGAD-TQAKNAEGKRPVELVPPESP--LAQLFL 217 (261)
T ss_dssp TTCHHHHHHHHHHTCCTT-C-CB-TTBCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCGGGGSCTTCT--HHHHHH
T ss_pred hCCHHHHHHHHHcCCCCC-C-CC-CCCChHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCChhhhcccccc--HHHHHH
Confidence 888888888888887764 2 33 677888888888888888888888877 67778888888888886554 666666
Q ss_pred hCcccc-----ccccccCCCCChHHHHHHhcC
Q 009805 317 KDPLYK-----SFIDEKNEMGNTPLHILATLS 343 (525)
Q Consensus 317 ~~~~~~-----~~in~~d~~G~T~Lh~A~~~~ 343 (525)
+..... ..++.+|..|+||||+|.+..
T Consensus 218 ~~~~~~~l~~~~~~~~r~~~g~t~l~~~~~~~ 249 (261)
T 2xai_A 218 EREGPPSLMQLCRLRIRKCFGIQQHHKITKLV 249 (261)
T ss_dssp HC-CCCCHHHHHHHHHHTTSCTTCGGGGGGSS
T ss_pred hccCCccHHHHHHHHHHHHhchhccccCcccC
Confidence 643221 334555666666666666554
No 11
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=2.2e-41 Score=335.27 Aligned_cols=278 Identities=19% Similarity=0.145 Sum_probs=226.8
Q ss_pred HHHHHHcCCcchhhhhhhhccccccccCCCCchhhhhhhcccccccCCchhhHHHHHHHHHhCCccccccC-CCCCcHHH
Q 009805 5 LYEAATNGEIEPFNGIAKDNLRSIVTHNNKHTVLHVNIARQSLKNKEGESVSTKFVEQILEICPSLLIQTN-AKGDSPLH 83 (525)
Q Consensus 5 L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~g~~~~~~~ll~~~~~~~~~l~~~~-~~g~tpLh 83 (525)
+..+...|+.+.+++++... .+..|.||||+|+.. +. +++++|++ ..++..| ..|.||||
T Consensus 70 ~~~~~~~g~~~~~~~~~~~~-----~~~~g~t~L~~Aa~~-------~~-~~~~~L~~------~~~n~~d~~~g~t~Lh 130 (373)
T 2fo1_E 70 GNGNDFLGDFNHTNLQIPTE-----PEPESPIKLHTEAAG-------SY-AITEPITR------ESVNIIDPRHNRTVLH 130 (373)
T ss_dssp -----------------------------CCCHHHHHHHS-------SS-CCCSCCST------TTTTTCCCSSCCCHHH
T ss_pred CCCCCccccccccccccccC-----CCCCCccHHHHHhcC-------Cc-hHHHHhcc------ccccccCCcCCCCHHH
Confidence 34566668888888876553 344899999999988 75 67776632 3566677 78999999
Q ss_pred HHHHcCChhHHHHHH--------HhhhcCChhHhhhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCC
Q 009805 84 AAAKCGRPAVVKVLI--------EFAKKQPTAMKCCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFPYS 155 (525)
Q Consensus 84 ~A~~~g~~~~v~~Ll--------~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~ 155 (525)
+|+..|+.+++++|+ +.+++ ++.+|..|.||||+|+..|+.+++++|+++|++++ .
T Consensus 131 ~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~---------------vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~-~ 194 (373)
T 2fo1_E 131 WIASNSSAEKSEDLIVHEAKECIAAGAD---------------VNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPT-I 194 (373)
T ss_dssp HHHCTTCCSCCTTHHHHHHHHHHHTCCC---------------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSC-C
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHhcCCC---------------CcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCc-c
Confidence 999999999988887 45555 67789999999999999999999999999999987 6
Q ss_pred CCCCCchHHHHHHHcCCHHHHHHHHHhc---CCCCCCCCCCCcHHHHHHHcC---CHHHHHHHHHhcCcCcc-------c
Q 009805 156 ANVNGETPLYMAAARGSKKMVAEILEKC---SSAAHDGPNGKTALHAAVNSY---AADVVEKLLAKKRHLTR-------E 222 (525)
Q Consensus 156 ~~~~g~tpL~~A~~~g~~~~v~~Ll~~~---~~~~~~~~~g~t~L~~A~~~~---~~~~~~~Ll~~~~~~~~-------~ 222 (525)
.+..|.||||+|+..|+.+++++|++++ ++++..+..|.||||+|+..+ +.+++++|++.+.+... .
T Consensus 195 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~ 274 (373)
T 2fo1_E 195 YNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDS 274 (373)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSS
T ss_pred cCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCc
Confidence 7889999999999999999999999998 799999999999999999998 89999999999988432 3
Q ss_pred CCCCCCcHHHHHHHcCChhHHHHHhhcCCCcchhcccCCCCcHHHHHHhcCCHHHHHHHHhhCCCccccccCCCCchhHH
Q 009805 223 RDDCGWTPLHHSAYLGLKDITALLLEFDGSSALILDKDRKMTALLMAASQGHESLAGTIIAHYPECYDLVDNGGWNVLHF 302 (525)
Q Consensus 223 ~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~ 302 (525)
.|..|.||||+|+..|+.+++++|++++....+..+. .|.||||+|+..|+.+++++|++++++ ++.+|..|+||||+
T Consensus 275 ~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~-~g~TpL~~A~~~g~~~iv~~Ll~~gad-~~~~d~~g~t~l~~ 352 (373)
T 2fo1_E 275 EKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDE-DGKTPIMLAAQEGRIEVVMYLIQQGAS-VEAVDATDHTARQL 352 (373)
T ss_dssp SSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCT-TCCCHHHHHHHHTCHHHHHHHHHTTCC-SSCCCSSSCCHHHH
T ss_pred ccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCC-CCCCHHHHHHHcCCHHHHHHHHHcCCC-ccCCCCCCCCHHHH
Confidence 6778999999999999999999999987333355565 799999999999999999999999998 78899999999999
Q ss_pred HHhcCCHHHHHHHhhCc
Q 009805 303 LMVSLHESKLKRLLKDP 319 (525)
Q Consensus 303 A~~~~~~~~~~~ll~~~ 319 (525)
|+.+++.+++++|++..
T Consensus 353 A~~~g~~~iv~~Ll~~~ 369 (373)
T 2fo1_E 353 AQANNHHNIVDIFDRCR 369 (373)
T ss_dssp HHHTTCHHHHHHHHTTC
T ss_pred HHHcCCHHHHHHHHhcC
Confidence 99999999999999854
No 12
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=316.88 Aligned_cols=255 Identities=19% Similarity=0.189 Sum_probs=185.7
Q ss_pred CCCchhhhhhhcccccccCCchhhHHHHHHHHHh-------CCccccccCCCCCcHHHHHHHcCChhHHHHHHHhhhcCC
Q 009805 33 NKHTVLHVNIARQSLKNKEGESVSTKFVEQILEI-------CPSLLIQTNAKGDSPLHAAAKCGRPAVVKVLIEFAKKQP 105 (525)
Q Consensus 33 ~g~t~Lh~A~~~~~~~~~~g~~~~~~~ll~~~~~-------~~~~l~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~ 105 (525)
.|.|+||+|+.. |+.+.+..++..... ....+...|..|.||||+|+..|+.+++++|++.+.+
T Consensus 14 ~~~~~lH~Aa~~-------g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~-- 84 (285)
T 3d9h_A 14 LVPRGSHMASMD-------GKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWA-- 84 (285)
T ss_dssp -----------------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCC--
T ss_pred HHHHHHHHHhhc-------CCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCC--
Confidence 899999999999 997776665432111 1223456788899999999999999999999998876
Q ss_pred hhHhhhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCC
Q 009805 106 TAMKCCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFPYSANVNGETPLYMAAARGSKKMVAEILEKCSS 185 (525)
Q Consensus 106 ~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ 185 (525)
++.+|.+|.||||+|+..|+.+++++|+++|++++ ..+..|.||||+|+..|+.+++++|+++|++
T Consensus 85 -------------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 150 (285)
T 3d9h_A 85 -------------VNIITADHVSPLHEACLGGHLSCVKILLKHGAQVN-GVTADWHTPLFNACVSGSWDCVNLLLQHGAS 150 (285)
T ss_dssp -------------SCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSS-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred -------------CCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHcCHHHHHHHHHHCCCC
Confidence 56688889999999999999999999999988876 6778899999999999999999999999888
Q ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCcccCCCCCCcHHHHHHHcCChhHHHHHhhcCCCcchhcccCCCCcH
Q 009805 186 AAHDGPNGKTALHAAVNSYAADVVEKLLAKKRHLTRERDDCGWTPLHHSAYLGLKDITALLLEFDGSSALILDKDRKMTA 265 (525)
Q Consensus 186 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tp 265 (525)
++..+ .|.||||+|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+.+++++|+++|.+.. .+. .|.||
T Consensus 151 ~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~--~~~-~g~t~ 225 (285)
T 3d9h_A 151 VQPES-DLASPIHEAARRGHVECVNSLIAYGGN-IDHKISHLGTPLYLACENQQRACVKKLLESGADVN--QGK-GQDSP 225 (285)
T ss_dssp SSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCC-TTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTT--CCB-TTBCH
T ss_pred CCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCC--CCC-CCCCH
Confidence 77543 488899998888888888888888887 57778888888888888888888888888877764 233 67788
Q ss_pred HHHHHhcCCHHHHHHHHhhCCCccccccCCCCchhHHHHhcCCHHHHHHHhhC
Q 009805 266 LLMAASQGHESLAGTIIAHYPECYDLVDNGGWNVLHFLMVSLHESKLKRLLKD 318 (525)
Q Consensus 266 L~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~ll~~ 318 (525)
||+|+..|+.+++++|++++++ ++.+|.+|+||||+|+ ++.++++.|++.
T Consensus 226 L~~A~~~~~~~~v~~Ll~~gad-~~~~d~~g~t~l~~A~--~~~~~~~~Ll~~ 275 (285)
T 3d9h_A 226 LHAVVRTASEELACLLMDFGAD-TQAKNAEGKRPVELVP--PESPLAQLFLER 275 (285)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCGGGGSC--TTSHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHhc--CccHHHHHHHHh
Confidence 8888888888888888888777 6777888888888887 345677777763
No 13
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.1e-40 Score=313.77 Aligned_cols=270 Identities=16% Similarity=0.124 Sum_probs=202.6
Q ss_pred cCCCCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCC
Q 009805 74 TNAKGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFP 153 (525)
Q Consensus 74 ~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~ 153 (525)
....|.|+||+|+..|+.+.+..++..+....... ......++.+|..|.||||+|+..|+.+++++|++.|++++
T Consensus 11 ~~~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~----~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~ 86 (285)
T 3d9h_A 11 SSGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGI----RLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVN 86 (285)
T ss_dssp -------------------------------CCSE----ECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSC
T ss_pred cchHHHHHHHHHhhcCCCCCcccCCCCccccccch----hhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 34679999999999999887777776653310000 00011256689999999999999999999999999999976
Q ss_pred CCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCcccCCCCCCcHHHH
Q 009805 154 YSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAVNSYAADVVEKLLAKKRHLTRERDDCGWTPLHH 233 (525)
Q Consensus 154 ~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~ 233 (525)
..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|++.+++. + .+..|.||||+
T Consensus 87 -~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~-~~~~g~t~L~~ 163 (285)
T 3d9h_A 87 -IITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASV-Q-PESDLASPIHE 163 (285)
T ss_dssp -EECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-S-CSCTTSCHHHH
T ss_pred -CcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCC-C-CCCCCCCHHHH
Confidence 67889999999999999999999999999999999999999999999999999999999999884 3 34459999999
Q ss_pred HHHcCChhHHHHHhhcCCCcchhcccCCCCcHHHHHHhcCCHHHHHHHHhhCCCccccccCCCCchhHHHHhcCCHHHHH
Q 009805 234 SAYLGLKDITALLLEFDGSSALILDKDRKMTALLMAASQGHESLAGTIIAHYPECYDLVDNGGWNVLHFLMVSLHESKLK 313 (525)
Q Consensus 234 A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~ 313 (525)
|+..|+.+++++|++++.+. ...+. .|.||||+|+..|+.+++++|++.+++ ++ .|..|+||||+|+..++.++++
T Consensus 164 A~~~g~~~~v~~Ll~~g~~~-~~~d~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~-~~~~g~t~L~~A~~~~~~~~v~ 239 (285)
T 3d9h_A 164 AARRGHVECVNSLIAYGGNI-DHKIS-HLGTPLYLACENQQRACVKKLLESGAD-VN-QGKGQDSPLHAVVRTASEELAC 239 (285)
T ss_dssp HHHHTCHHHHHHHHHTTCCT-TCCBT-TTBCHHHHHHHTTCHHHHHHHHHTTCC-TT-CCBTTBCHHHHHHHTTCHHHHH
T ss_pred HHHcCCHHHHHHHHHCCCCC-CCcCC-CCCCHHHHHHHcCcHHHHHHHHHCCCC-CC-CCCCCCCHHHHHHHcCCHHHHH
Confidence 99999999999999999887 44455 799999999999999999999999988 44 4889999999999999999999
Q ss_pred HHhhCccccccccccCCCCChHHHHHHhcCchhHHHHHHHhCCCCh
Q 009805 314 RLLKDPLYKSFIDEKNEMGNTPLHILATLSARTCNEIVRQIGKGDT 359 (525)
Q Consensus 314 ~ll~~~~~~~~in~~d~~G~T~Lh~A~~~~~~~~~~ll~~~~~~d~ 359 (525)
+|++. +++++.+|.+|+||||+|+.. ...+..|+++ .++++
T Consensus 240 ~Ll~~---gad~~~~d~~g~t~l~~A~~~-~~~~~~Ll~~-~~a~l 280 (285)
T 3d9h_A 240 LLMDF---GADTQAKNAEGKRPVELVPPE-SPLAQLFLER-EGASL 280 (285)
T ss_dssp HHHHT---TCCTTCCCTTSCCGGGGSCTT-SHHHHHHHHH-C----
T ss_pred HHHHC---CCCCCCcCCCCCCHHHHhcCc-cHHHHHHHHh-hccCC
Confidence 99985 456999999999999999954 3444556552 34443
No 14
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=3e-40 Score=310.75 Aligned_cols=251 Identities=20% Similarity=0.245 Sum_probs=225.0
Q ss_pred CCCchhhhhhhcccccccCCchhhHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhh
Q 009805 33 NKHTVLHVNIARQSLKNKEGESVSTKFVEQILEICPSLLIQTNAKGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCA 112 (525)
Q Consensus 33 ~g~t~Lh~A~~~~~~~~~~g~~~~~~~ll~~~~~~~~~l~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~ 112 (525)
+|+||||+|+.. |+.+++++|++. +.+++.+|.+|.||||+|+..|+.+++++|++.+++
T Consensus 2 ~g~t~L~~A~~~-------g~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~--------- 61 (261)
T 2xai_A 2 SDWSPMHEAAIH-------GHQLSLRNLISQ----GWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQ--------- 61 (261)
T ss_dssp --CCHHHHHHHH-------TCHHHHHHHHHT----TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC---------
T ss_pred CCCCHHHHHHHc-------CCHHHHHHHHHC----CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC---------
Confidence 689999999999 999999999773 667889999999999999999999999999999987
Q ss_pred hhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCC
Q 009805 113 KTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFPYSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPN 192 (525)
Q Consensus 113 ~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~ 192 (525)
++.+|..|.||||+|+..|+.+++++|+++|++++ .+..|.||||+|+..|+.+++++|+++|++++..+..
T Consensus 62 ------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 133 (261)
T 2xai_A 62 ------VNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQ--PESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISH 133 (261)
T ss_dssp ------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSS--CSCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTT
T ss_pred ------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC--CCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCC
Confidence 66789999999999999999999999999999876 3456999999999999999999999999999999999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhcCcCcccCCCCCCcHHHHHHHcCChhHHHHHhhcCCCcchhcccCCCCcHHHHHHhc
Q 009805 193 GKTALHAAVNSYAADVVEKLLAKKRHLTRERDDCGWTPLHHSAYLGLKDITALLLEFDGSSALILDKDRKMTALLMAASQ 272 (525)
Q Consensus 193 g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpL~~A~~~ 272 (525)
|.||||+|+..++.+++++|++.+++. + .+..|.||||+|+..|+.+++++|+++|++. ...+. .|.||||+|+.+
T Consensus 134 g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~-~~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~-~~~d~-~g~tpl~~A~~~ 209 (261)
T 2xai_A 134 LGTPLYLACENQQRACVKKLLESGADV-N-QGKGQDSPLHAVARTASEELACLLMDFGADT-QAKNA-EGKRPVELVPPE 209 (261)
T ss_dssp TBCHHHHHHHTTCHHHHHHHHHHTCCT-T-CCBTTBCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCT-TSCCGGGGSCTT
T ss_pred CCCHHHHHHHhCCHHHHHHHHHcCCCC-C-CCCCCCChHHHHHHcCCHHHHHHHHHcCCCC-CCcCC-CCCChhhhcccc
Confidence 999999999999999999999999985 4 4888999999999999999999999999987 55555 799999999965
Q ss_pred CCHHHHHHHHhhCCC-------ccccccCCCCchhHHHHhcCCHHHHHHHhh
Q 009805 273 GHESLAGTIIAHYPE-------CYDLVDNGGWNVLHFLMVSLHESKLKRLLK 317 (525)
Q Consensus 273 g~~~~v~~Ll~~~~~-------~~~~~d~~g~t~Lh~A~~~~~~~~~~~ll~ 317 (525)
+ ++++.|++++.. ....+|..|+|++|.|.+...++.++.++.
T Consensus 210 ~--~~~~~ll~~~~~~~l~~~~~~~~r~~~g~t~l~~~~~~~~p~~l~~~l~ 259 (261)
T 2xai_A 210 S--PLAQLFLEREGPPSLMQLCRLRIRKCFGIQQHHKITKLVLPEDLKQFLL 259 (261)
T ss_dssp C--THHHHHHHC-CCCCHHHHHHHHHHTTSCTTCGGGGGGSSSCHHHHHHHT
T ss_pred c--cHHHHHHhccCCccHHHHHHHHHHHHhchhccccCcccCCcHHHHHHHh
Confidence 5 588999988653 244679999999999999988887777665
No 15
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=2.4e-40 Score=327.41 Aligned_cols=261 Identities=19% Similarity=0.165 Sum_probs=228.9
Q ss_pred ccccCCCCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCC
Q 009805 71 LIQTNAKGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGP 150 (525)
Q Consensus 71 l~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~ 150 (525)
....|..|.||||+|+..|+.++|++|++.+.+ ++.+|..|.||||+|+..|+.+++++|+++|+
T Consensus 13 ~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~---------------~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~ 77 (364)
T 3ljn_A 13 RIKSDDENMEKIHVAARKGQTDEVRRLIETGVS---------------PTIQNRFGCTALHLACKFGCVDTAKYLASVGE 77 (364)
T ss_dssp ---CCHHHHHHHHHHHHHTCHHHHHHHHHTTCC---------------TTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCC
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---------------ccccCCCCCcHHHHHHHcCCHHHHHHHHHCCC
Confidence 355788999999999999999999999999887 67789999999999999999999999999999
Q ss_pred CCCCCCCCCCchHHHHHHHcCCHHHHHHHHHh----cCCCCC-----------------CCCCCCcHHHHHHHcC--CHH
Q 009805 151 NFPYSANVNGETPLYMAAARGSKKMVAEILEK----CSSAAH-----------------DGPNGKTALHAAVNSY--AAD 207 (525)
Q Consensus 151 ~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~----~~~~~~-----------------~~~~g~t~L~~A~~~~--~~~ 207 (525)
+.. +..|.||||+|+..|+.+++++|+++ +.+++. .+..|.||||+|+..| +.+
T Consensus 78 ~~~---~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~ 154 (364)
T 3ljn_A 78 VHS---LWHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLE 154 (364)
T ss_dssp CCC---CBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHH
T ss_pred Ccc---ccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHH
Confidence 643 45799999999999999999999999 766665 7788999999999999 999
Q ss_pred HHHHHHHhcCcCcccCCCCCCcHHHHHHHcCChhHHHHHhhcCCCc----chhcccCCCCcHHHHHHhcCCHHHHHHHHh
Q 009805 208 VVEKLLAKKRHLTRERDDCGWTPLHHSAYLGLKDITALLLEFDGSS----ALILDKDRKMTALLMAASQGHESLAGTIIA 283 (525)
Q Consensus 208 ~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~----~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~ 283 (525)
++++|++.+.+ ++.+|..|.||||+|+..|+.+++++|++++++. .+..+. .|.||||+|+..|+.+++++|++
T Consensus 155 ~v~~Ll~~ga~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~ 232 (364)
T 3ljn_A 155 MIKILVQLGAS-PTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANK-QGNSHLHWAILINWEDVAMRFVE 232 (364)
T ss_dssp HHHHHHHHTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCT-TCCCTTHHHHTTTCHHHHHHHHT
T ss_pred HHHHHHHcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCC-CCCcHHHHHHHcCCHHHHHHHHH
Confidence 99999999988 6889999999999999999999999999998872 244454 79999999999999999999999
Q ss_pred hCCCccccccCCCCchhHHHHhcCCHHHHHHHhhCcccc---------ccccccCCCCChHHHHHHhcC-chhHHHHHH
Q 009805 284 HYPECYDLVDNGGWNVLHFLMVSLHESKLKRLLKDPLYK---------SFIDEKNEMGNTPLHILATLS-ARTCNEIVR 352 (525)
Q Consensus 284 ~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~ll~~~~~~---------~~in~~d~~G~T~Lh~A~~~~-~~~~~~ll~ 352 (525)
++++ ++.+|..|+||||+|+..++.+++++|++.+... ......+..|+|||+.|+..+ ...+..|+.
T Consensus 233 ~gad-~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~~~~~v~~ll~ 310 (364)
T 3ljn_A 233 MGID-VNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQ 310 (364)
T ss_dssp TTCC-TTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBCGGGCCCCTTSCSSCCHHHHHHHHHHH
T ss_pred cCCC-CCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCcccccccccccccchhhhhccCHHHHHHHHH
Confidence 9999 7889999999999999999999999999864221 222336788999999999987 445566666
No 16
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=3.2e-40 Score=326.45 Aligned_cols=264 Identities=17% Similarity=0.183 Sum_probs=229.5
Q ss_pred cccccccCCCCchhhhhhhcccccccCCchhhHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCChhHHHHHHHhhhcC
Q 009805 25 LRSIVTHNNKHTVLHVNIARQSLKNKEGESVSTKFVEQILEICPSLLIQTNAKGDSPLHAAAKCGRPAVVKVLIEFAKKQ 104 (525)
Q Consensus 25 ~~~~~~~~~g~t~Lh~A~~~~~~~~~~g~~~~~~~ll~~~~~~~~~l~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~ 104 (525)
++.+..|.+|.||||+|+.. |+.+++++|++. +.+++.+|..|.||||+|+..|+.++|++|++.+++
T Consensus 11 ~~~~~~d~~g~t~L~~Aa~~-------g~~~~v~~Ll~~----g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~- 78 (364)
T 3ljn_A 11 LNRIKSDDENMEKIHVAARK-------GQTDEVRRLIET----GVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEV- 78 (364)
T ss_dssp -----CCHHHHHHHHHHHHH-------TCHHHHHHHHHT----TCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCC-
T ss_pred CCccccCCCCCCHHHHHHHc-------CCHHHHHHHHHc----CCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCC-
Confidence 44445666899999999999 999999999763 677888999999999999999999999999999875
Q ss_pred ChhHhhhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhc----CCCCCC----------------CCCCCCchHH
Q 009805 105 PTAMKCCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEA----GPNFPY----------------SANVNGETPL 164 (525)
Q Consensus 105 ~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~----~~~~~~----------------~~~~~g~tpL 164 (525)
..+.+|.||||+|+..|+.+++++|++. |.+.+. ..+..|.|||
T Consensus 79 ----------------~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L 142 (364)
T 3ljn_A 79 ----------------HSLWHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTAL 142 (364)
T ss_dssp ----------------CCCBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHH
T ss_pred ----------------ccccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHH
Confidence 2345899999999999999999999998 665431 1566899999
Q ss_pred HHHHHcC--CHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcC----cccCCCCCCcHHHHHHHcC
Q 009805 165 YMAAARG--SKKMVAEILEKCSSAAHDGPNGKTALHAAVNSYAADVVEKLLAKKRHL----TRERDDCGWTPLHHSAYLG 238 (525)
Q Consensus 165 ~~A~~~g--~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~----~~~~d~~g~tpL~~A~~~g 238 (525)
|+|+..| +.+++++|+++|++++..|..|.||||+|+..|+.+++++|++.+++. .+..|..|+||||+|+..|
T Consensus 143 ~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g 222 (364)
T 3ljn_A 143 HWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILIN 222 (364)
T ss_dssp HHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTT
T ss_pred HHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcC
Confidence 9999999 999999999999999999999999999999999999999999998873 5778899999999999999
Q ss_pred ChhHHHHHhhcCCCcchhcccCCCCcHHHHHHhcCCHHHHHHHHhhCCCc-----------cccccCCCCchhHHHHhcC
Q 009805 239 LKDITALLLEFDGSSALILDKDRKMTALLMAASQGHESLAGTIIAHYPEC-----------YDLVDNGGWNVLHFLMVSL 307 (525)
Q Consensus 239 ~~~~v~~Ll~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~-----------~~~~d~~g~t~Lh~A~~~~ 307 (525)
+.+++++|+++|++. +..+. .|.||||+|+..|+.+++++|++++++. ....+..|+++|++|+..+
T Consensus 223 ~~~~v~~Ll~~gad~-~~~d~-~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~ 300 (364)
T 3ljn_A 223 WEDVAMRFVEMGIDV-NMEDN-EHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADP 300 (364)
T ss_dssp CHHHHHHHHTTTCCT-TCCCT-TSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBCGGGCCCCTTSCSSCCH
T ss_pred CHHHHHHHHHcCCCC-CCCCC-CCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCcccccccccccccchhhhhcc
Confidence 999999999999987 55555 7999999999999999999999997652 1225678999999999999
Q ss_pred CHHHHHHHhhC
Q 009805 308 HESKLKRLLKD 318 (525)
Q Consensus 308 ~~~~~~~ll~~ 318 (525)
+.+.+..|+..
T Consensus 301 ~~~~v~~ll~~ 311 (364)
T 3ljn_A 301 SKQEVLQLLQE 311 (364)
T ss_dssp HHHHHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 88888887764
No 17
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=3.3e-39 Score=302.24 Aligned_cols=228 Identities=21% Similarity=0.195 Sum_probs=178.3
Q ss_pred hcCccCCCChHhHHHHHcC-------------CHHHHHHHHhcCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCC
Q 009805 119 LGLTNEEENTALHEAVQCG-------------NLDAVKILMEAGPNFPYSANVNGETPLYMAAARGSKKMVAEILEKCSS 185 (525)
Q Consensus 119 l~~~~~~g~t~Lh~A~~~g-------------~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ 185 (525)
++.+|.+|.||||+|+..| +.+++++|++.|++++...+..|.||||+|+..|+.+++++|+++|++
T Consensus 3 vn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~ 82 (253)
T 1yyh_A 3 VNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASAD 82 (253)
T ss_dssp -------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Confidence 5678999999999999987 899999999999998877789999999999999999999999999999
Q ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCcccCCCCCCcHHHHHHHcCChhHHHHHhhcCCCcchhcccCCCCcH
Q 009805 186 AAHDGPNGKTALHAAVNSYAADVVEKLLAKKRHLTRERDDCGWTPLHHSAYLGLKDITALLLEFDGSSALILDKDRKMTA 265 (525)
Q Consensus 186 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tp 265 (525)
++..+..|.||||+|+..++.+++++|++.++...+.++..|.||||+|+..|+.+++++|+++|.+. +..+. .|.||
T Consensus 83 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~-~g~t~ 160 (253)
T 1yyh_A 83 ANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADV-NAVDD-LGKSA 160 (253)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCT-TCBCT-TSCBH
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCC-CCcCC-CCCCH
Confidence 99999999999999999999999999999998667889999999999999999999999999999887 44454 79999
Q ss_pred HHHHHhcCCHHHHHHHHhhCCCccccccCCCCchhHHHHhcCCHHHHHHHhhCccccccccccCCCCChHHHHHHhcCch
Q 009805 266 LLMAASQGHESLAGTIIAHYPECYDLVDNGGWNVLHFLMVSLHESKLKRLLKDPLYKSFIDEKNEMGNTPLHILATLSAR 345 (525)
Q Consensus 266 L~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~ll~~~~~~~~in~~d~~G~T~Lh~A~~~~~~ 345 (525)
||+|+..|+.+++++|++++++ ++.+|..|+||||+|+..++.++++.|++. +++++.+|..|+||||+|++.|..
T Consensus 161 L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~---ga~~~~~d~~g~tpl~~A~~~g~~ 236 (253)
T 1yyh_A 161 LHWAAAVNNVDAAVVLLKNGAN-KDMQNNREETPLFLAAREGSYETAKVLLDH---FANRDITDHMDRLPRDIAQERMHH 236 (253)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHT---TCCTTCCCTTCCCHHHHHHHTTCH
T ss_pred HHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHCCCHHHHHHHHHc---CCCccccccCCCCHHHHHHHcCCH
Confidence 9999999999999999999998 788999999999999999999999999995 456899999999999999999988
Q ss_pred hHHHHHH
Q 009805 346 TCNEIVR 352 (525)
Q Consensus 346 ~~~~ll~ 352 (525)
.+..++.
T Consensus 237 ~i~~~l~ 243 (253)
T 1yyh_A 237 DIVRLLD 243 (253)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8855554
No 18
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=2.2e-39 Score=303.36 Aligned_cols=242 Identities=21% Similarity=0.250 Sum_probs=100.6
Q ss_pred ccccccCCCCchhhhhhhcccccccCCchhhHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCChhHHHHHHHhhhcCC
Q 009805 26 RSIVTHNNKHTVLHVNIARQSLKNKEGESVSTKFVEQILEICPSLLIQTNAKGDSPLHAAAKCGRPAVVKVLIEFAKKQP 105 (525)
Q Consensus 26 ~~~~~~~~g~t~Lh~A~~~~~~~~~~g~~~~~~~ll~~~~~~~~~l~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~ 105 (525)
+.+.+|.+|.||||+|+.. |+.- + ....+...++.+++++|++.+.+.
T Consensus 2 dvn~~d~~g~tpL~~A~~~-------g~~~------~------------------~~~~~~~~~~~~~v~~Ll~~g~~~- 49 (253)
T 1yyh_A 2 DVNVRGPDGFTPLMIASCS-------GGGL------E------------------TGNSEEEEDAPAVISDFIYQGASL- 49 (253)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCCCCCCcHHHHHHhc-------cccc------c------------------ccchhhcCCChHHHHHHHHccCCc-
Confidence 4567888999999999998 6210 0 000133444555555555554431
Q ss_pred hhHhhhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHhcC-
Q 009805 106 TAMKCCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFPYSANVNGETPLYMAAARGSKKMVAEILEKCS- 184 (525)
Q Consensus 106 ~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~- 184 (525)
....|..|.||||+|+..|+.+++++|+++|++++ ..+..|.||||+|+..|+.+++++|++++.
T Consensus 50 -------------~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~ 115 (253)
T 1yyh_A 50 -------------HNQTDRTGETALHLAARYSRSDAAKRLLEASADAN-IQDNMGRTPLHAAVSADAQGVFQILIRNRAT 115 (253)
T ss_dssp ---------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHSTTS
T ss_pred -------------ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 12234455555555555555555555555555543 344455555555555555555555555543
Q ss_pred CCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCcccCCCCCCcHHHHHHHcCChhHHHHHhhcCCCcchhcccCCCCc
Q 009805 185 SAAHDGPNGKTALHAAVNSYAADVVEKLLAKKRHLTRERDDCGWTPLHHSAYLGLKDITALLLEFDGSSALILDKDRKMT 264 (525)
Q Consensus 185 ~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t 264 (525)
+++..+..|.||||+|+..++.+++++|++.+.+ ++.+|..|+||||+|+..|+.+++++|+++|++. +..+. .|.|
T Consensus 116 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~-~g~t 192 (253)
T 1yyh_A 116 DLDARMHDGTTPLILAARLAVEGMLEDLINSHAD-VNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANK-DMQNN-REET 192 (253)
T ss_dssp CTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCC-TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCT-TCCCT-TSCC
T ss_pred CccccCCCCCcHHHHHHHcChHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCC-CCCC
Confidence 4455555555555555555555555555555544 3444555555555555555555555555555544 22222 4555
Q ss_pred HHHHHHhcCCHHHHHHHHhhCCCccccccCCCCchhHHHHhcCCHHHHHHHhh
Q 009805 265 ALLMAASQGHESLAGTIIAHYPECYDLVDNGGWNVLHFLMVSLHESKLKRLLK 317 (525)
Q Consensus 265 pL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~ll~ 317 (525)
|||+|+..|+.+++++|++++++ ++.+|..|+||||+|+++|+.+++++|..
T Consensus 193 pL~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~g~~~i~~~l~~ 244 (253)
T 1yyh_A 193 PLFLAAREGSYETAKVLLDHFAN-RDITDHMDRLPRDIAQERMHHDIVRLLDL 244 (253)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHC
T ss_pred HHHHHHHCCCHHHHHHHHHcCCC-ccccccCCCCHHHHHHHcCCHHHHHHHHH
Confidence 55555555555555555555555 44555555555555555555555555544
No 19
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=3e-38 Score=292.73 Aligned_cols=225 Identities=24% Similarity=0.284 Sum_probs=128.2
Q ss_pred cccCCCCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCC
Q 009805 72 IQTNAKGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPN 151 (525)
Q Consensus 72 ~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~ 151 (525)
+.+|.+|.||||+|+..|+.+++++|++.+.+ ++..+..|.||||+|+..|+.+++++|+++|++
T Consensus 5 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~---------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 69 (237)
T 3b7b_A 5 KMEHQNKRSPLHAAAEAGHVDICHMLVQAGAN---------------IDTCSEDQRTPLMEAAENNHLEAVKYLIKAGAL 69 (237)
T ss_dssp CCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCC---------------TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC
T ss_pred ccccCCCCCHHHHHHHcCcHHHHHHHHHcCCC---------------cCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCC
Confidence 44555666666666666666666666666554 344555566666666666666666666666655
Q ss_pred CCCCCCCCCchHHHHHHHcCCHHHHHHHHHhc-CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCcccCCCCCCcH
Q 009805 152 FPYSANVNGETPLYMAAARGSKKMVAEILEKC-SSAAHDGPNGKTALHAAVNSYAADVVEKLLAKKRHLTRERDDCGWTP 230 (525)
Q Consensus 152 ~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~-~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tp 230 (525)
++ ..+..|.||||+|+..|+.+++++|++++ .+++..+..|.||||+|+..++.+++++|++.+++ ++.++..|.||
T Consensus 70 ~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~ 147 (237)
T 3b7b_A 70 VD-PKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSD-INIRDNEENIC 147 (237)
T ss_dssp CC-CCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCH
T ss_pred CC-CCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCccCCCCCCH
Confidence 44 44555666666666666666666666665 55555555666666666666666666666665555 34555555555
Q ss_pred HHHHHHcCChhHHHHHhhcCCCcchhcccCCCCcHHHHHHhcCCHHHHHHHHhhCCCccccccCCCCchhHHHHhcCCHH
Q 009805 231 LHHSAYLGLKDITALLLEFDGSSALILDKDRKMTALLMAASQGHESLAGTIIAHYPECYDLVDNGGWNVLHFLMVSLHES 310 (525)
Q Consensus 231 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~ 310 (525)
||+|+..|+.+++++|+++|.+. +..+. .|.||||+|+..|+.+++++|++++++ ++.+|..|+||||+|+.+++.+
T Consensus 148 L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~gad-~~~~d~~g~t~l~~A~~~~~~~ 224 (237)
T 3b7b_A 148 LHWAAFSGCVDIAEILLAAKCDL-HAVNI-HGDSPLHIAARENRYDCVVLFLSRDSD-VTLKNKEGETPLQCASLNSQVW 224 (237)
T ss_dssp HHHHHHHCCHHHHHHHHTTTCCT-TCCCT-TCCCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHSCTTCHHH
T ss_pred HHHHHHCCCHHHHHHHHHcCCCC-CCcCC-CCCCHHHHHHHhCCHhHHHHHHHcCCC-CCccCCCCCCHHHHHHHHHHHH
Confidence 55555555555555555555544 22222 455555555555555555555555555 4445555555555555555544
Q ss_pred HHHHHh
Q 009805 311 KLKRLL 316 (525)
Q Consensus 311 ~~~~ll 316 (525)
.+..++
T Consensus 225 ~~~~l~ 230 (237)
T 3b7b_A 225 SALQMS 230 (237)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444333
No 20
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=6.7e-39 Score=305.23 Aligned_cols=263 Identities=18% Similarity=0.139 Sum_probs=141.7
Q ss_pred ccccCCCCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCC
Q 009805 71 LIQTNAKGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGP 150 (525)
Q Consensus 71 l~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~ 150 (525)
++.+|.+|.||||+|++.|+.++|++|++.+++.. .++.+|..|.||||+|+..|+.+++++|+++|+
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~------------~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga 69 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHE------------YLDLQNDLGQTALHLAAILGEASTVEKLYAAGA 69 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSG------------GGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcc------------cccccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 45688999999999999999999999999887622 256788999999999999999999999999999
Q ss_pred CCCCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCcccCCCCCCcH
Q 009805 151 NFPYSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAVNSYAADVVEKLLAKKRHLTRERDDCGWTP 230 (525)
Q Consensus 151 ~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tp 230 (525)
+++ ..+..|.||||+|+..|+.+++++|++++++......... +... .......+.++
T Consensus 70 ~~~-~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~------------------~~~~---~~~~~~~~~~~ 127 (282)
T 1oy3_D 70 GVL-VAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTY------------------LTQS---QDCTPDTSHAP 127 (282)
T ss_dssp CSS-CCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC----------------------------------------
T ss_pred CCC-CCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHH------------------hhcc---cccCcchhcch
Confidence 976 6788999999999999999999999998876433211100 0000 00111223333
Q ss_pred HHHHHHcCChh-HHHHHhhcCCCcchhcccCCCCcHHHHHHhcCCHHHHHHHHhhCCCccccccC-CCCchhHHHHhcCC
Q 009805 231 LHHSAYLGLKD-ITALLLEFDGSSALILDKDRKMTALLMAASQGHESLAGTIIAHYPECYDLVDN-GGWNVLHFLMVSLH 308 (525)
Q Consensus 231 L~~A~~~g~~~-~v~~Ll~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~-~g~t~Lh~A~~~~~ 308 (525)
++.++..+... ....+...+.+. ...+. .|.||||+|+..|+.+++++|++++++ ++..+. .|+||||+|+..++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~~g~tpL~~A~~~~~ 204 (282)
T 1oy3_D 128 AAVDSQPNPENEEEPRDEDWRLQL-EAENY-DGHTPLHVAVIHKDAEMVRLLRDAGAD-LNKPEPTCGRTPLHLAVEAQA 204 (282)
T ss_dssp ----------------CCCGGGGT-TCCCT-TSCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTTCCCHHHHHHHTTC
T ss_pred hhhccccccchhhhhhhhhhhhcC-CCcCC-CCcCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCcCHHHHHHHcCC
Confidence 43333332221 122222222221 12222 344555555555555555555555544 233332 25555555555555
Q ss_pred HHHHHHHhhCccccccccccCCCCChHHHHHHhcCchhH-HHHHHHhCCCChHHHhccCCChHHHHhh
Q 009805 309 ESKLKRLLKDPLYKSFIDEKNEMGNTPLHILATLSARTC-NEIVRQIGKGDTQAVNKKKISVKHIELY 375 (525)
Q Consensus 309 ~~~~~~ll~~~~~~~~in~~d~~G~T~Lh~A~~~~~~~~-~~ll~~~~~~d~~~~n~~g~t~l~~a~~ 375 (525)
.+++++|++. +++++.+|..|+||||+|+..+...+ ..|++ .|+|++.+|..|.||+++|..
T Consensus 205 ~~~v~~Ll~~---gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~--~ga~~~~~~~~g~tpl~~a~~ 267 (282)
T 1oy3_D 205 ASVLELLLKA---GADPTARMYGGRTPLGSALLRPNPILARLLRA--HGAPEPEDGGDKLSPCSSSGS 267 (282)
T ss_dssp HHHHHHHHHT---TCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHH--TTCCCCCCC------------
T ss_pred HHHHHHHHHc---CCCCcccccCCCCHHHHHHHcCCcHHHHHHHH--cCCCcCcCCCcccccccccCC
Confidence 5555555543 23345555555555555555543333 44444 455555555555555555543
No 21
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=5.7e-39 Score=298.32 Aligned_cols=231 Identities=23% Similarity=0.262 Sum_probs=146.6
Q ss_pred cccCCCCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCC
Q 009805 72 IQTNAKGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPN 151 (525)
Q Consensus 72 ~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~ 151 (525)
+.+|.+|.||||+|++.|+.+++++|++...... ..++.+|..|.||||+|+..|+.+++++|+++|++
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~-----------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 71 (241)
T 1k1a_A 3 TRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGG-----------RELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGAS 71 (241)
T ss_dssp ----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTT-----------CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcC-----------CCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 3456666666666666666666666665321100 00445566666666666666666666666666666
Q ss_pred CCCCCCCCCchHHHHHHHcCCHHHHHHHHHhcC----CCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCcccCC-CC
Q 009805 152 FPYSANVNGETPLYMAAARGSKKMVAEILEKCS----SAAHDGPNGKTALHAAVNSYAADVVEKLLAKKRHLTRERD-DC 226 (525)
Q Consensus 152 ~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~----~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d-~~ 226 (525)
++ ..+..|.||||+|+..|+.+++++|+++++ +++..+..|.||||+|+..++.+++++|++.+++. +..+ ..
T Consensus 72 ~~-~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~~ 149 (241)
T 1k1a_A 72 PM-ALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADI-DAVDIKS 149 (241)
T ss_dssp TT-CCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTT
T ss_pred cc-ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCc-ccccccC
Confidence 54 455666666666666666666666666665 55666666777777777777777777777766663 3444 56
Q ss_pred CCcHHHHHHHcCChhHHHHHhhcCCCcchhcccCCCCcHHHHHHhcCCHHHHHHHHhhCCCccccccCCCCchhHHHHhc
Q 009805 227 GWTPLHHSAYLGLKDITALLLEFDGSSALILDKDRKMTALLMAASQGHESLAGTIIAHYPECYDLVDNGGWNVLHFLMVS 306 (525)
Q Consensus 227 g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~ 306 (525)
|.||||+|+..|+.+++++|+++|.+. +..+. .|.||||+|+..|+.+++++|++++++ ++.+|..|+||||+|+..
T Consensus 150 g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~tpl~~A~~~ 226 (241)
T 1k1a_A 150 GRSPLIHAVENNSLSMVQLLLQHGANV-NAQMY-SGSSALHSASGRGLLPLVRTLVRSGAD-SSLKNCHNDTPLMVARSR 226 (241)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCT-TCBCT-TSCBHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCTTTTCSSH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCC-CCCCHHHHHHHcCCHHHHHHHHhcCCC-CCCcCCCCCCHHHHHHhc
Confidence 777777777777777777777766665 33333 567777777777777777777777776 566777777777777777
Q ss_pred CCHHHHHHHhhC
Q 009805 307 LHESKLKRLLKD 318 (525)
Q Consensus 307 ~~~~~~~~ll~~ 318 (525)
++.++++.|.+.
T Consensus 227 ~~~~i~~~l~~~ 238 (241)
T 1k1a_A 227 RVIDILRGKATR 238 (241)
T ss_dssp HHHHHHTC----
T ss_pred CcHHHHhhhccC
Confidence 777777666653
No 22
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=1.2e-38 Score=296.04 Aligned_cols=227 Identities=22% Similarity=0.204 Sum_probs=201.9
Q ss_pred hcCccCCCChHhHHHHHcCCHHHHHHHHh----cCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCC
Q 009805 119 LGLTNEEENTALHEAVQCGNLDAVKILME----AGPNFPYSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGK 194 (525)
Q Consensus 119 l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~----~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~ 194 (525)
++.+|.+|.||||+|+..|+.+++++|++ .+.+++ ..+..|.||||+|+..|+.+++++|+++|++++..+..|.
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 80 (241)
T 1k1a_A 2 ATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELD-IYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQ 80 (241)
T ss_dssp -----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSC-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCC-cccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCC
Confidence 45689999999999999999999999997 677765 6788999999999999999999999999999999999999
Q ss_pred cHHHHHHHcCCHHHHHHHHHhcCc---CcccCCCCCCcHHHHHHHcCChhHHHHHhhcCCCcchhcccCCCCcHHHHHHh
Q 009805 195 TALHAAVNSYAADVVEKLLAKKRH---LTRERDDCGWTPLHHSAYLGLKDITALLLEFDGSSALILDKDRKMTALLMAAS 271 (525)
Q Consensus 195 t~L~~A~~~~~~~~~~~Ll~~~~~---~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpL~~A~~ 271 (525)
||||+|+..++.+++++|++.++. ..+..+..|.||||+|+..|+.+++++|++++.+... .+...|.||||+|+.
T Consensus 81 t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~~g~t~L~~A~~ 159 (241)
T 1k1a_A 81 TAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDA-VDIKSGRSPLIHAVE 159 (241)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTTCCCHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCccc-ccccCCCcHHHHHHH
Confidence 999999999999999999999872 3677889999999999999999999999999988743 342379999999999
Q ss_pred cCCHHHHHHHHhhCCCccccccCCCCchhHHHHhcCCHHHHHHHhhCccccccccccCCCCChHHHHHHhcCchhH-HHH
Q 009805 272 QGHESLAGTIIAHYPECYDLVDNGGWNVLHFLMVSLHESKLKRLLKDPLYKSFIDEKNEMGNTPLHILATLSARTC-NEI 350 (525)
Q Consensus 272 ~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~ll~~~~~~~~in~~d~~G~T~Lh~A~~~~~~~~-~~l 350 (525)
.|+.+++++|++++++ ++.+|..|+||||+|+..++.++++.|++. +++++.+|..|+||||+|+..+...+ +.|
T Consensus 160 ~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l 235 (241)
T 1k1a_A 160 NNSLSMVQLLLQHGAN-VNAQMYSGSSALHSASGRGLLPLVRTLVRS---GADSSLKNCHNDTPLMVARSRRVIDILRGK 235 (241)
T ss_dssp TTCHHHHHHHHHTTCC-TTCBCTTSCBHHHHHHHHTCHHHHHHHHHT---TCCTTCCCTTSCCTTTTCSSHHHHHHHTC-
T ss_pred cCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHhc---CCCCCCcCCCCCCHHHHHHhcCcHHHHhhh
Confidence 9999999999999998 788999999999999999999999999985 45689999999999999999987766 444
Q ss_pred H
Q 009805 351 V 351 (525)
Q Consensus 351 l 351 (525)
+
T Consensus 236 ~ 236 (241)
T 1k1a_A 236 A 236 (241)
T ss_dssp -
T ss_pred c
Confidence 3
No 23
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=9.6e-38 Score=289.34 Aligned_cols=222 Identities=25% Similarity=0.307 Sum_probs=205.4
Q ss_pred hcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHH
Q 009805 119 LGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFPYSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALH 198 (525)
Q Consensus 119 l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~ 198 (525)
++.+|..|.||||+|+..|+.+++++|+++|++++ ..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||
T Consensus 4 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 82 (237)
T 3b7b_A 4 FKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANID-TCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLH 82 (237)
T ss_dssp CCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHH
T ss_pred cccccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcC-ccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHH
Confidence 56789999999999999999999999999999986 67889999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHhcCcCcccCCCCCCcHHHHHHHcCChhHHHHHhhcCCCcchhcccCCCCcHHHHHHhcCCHHHH
Q 009805 199 AAVNSYAADVVEKLLAKKRHLTRERDDCGWTPLHHSAYLGLKDITALLLEFDGSSALILDKDRKMTALLMAASQGHESLA 278 (525)
Q Consensus 199 ~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v 278 (525)
+|+..|+.+++++|++.++...+..+..|.||||+|+..|+.+++++|+++|.+. ...+. .|.||||+|+..|+.+++
T Consensus 83 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~-~g~t~L~~A~~~~~~~~~ 160 (237)
T 3b7b_A 83 LAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDI-NIRDN-EENICLHWAAFSGCVDIA 160 (237)
T ss_dssp HHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT-TSCCHHHHHHHHCCHHHH
T ss_pred HHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CccCC-CCCCHHHHHHHCCCHHHH
Confidence 9999999999999999996667889999999999999999999999999999887 44444 799999999999999999
Q ss_pred HHHHhhCCCccccccCCCCchhHHHHhcCCHHHHHHHhhCccccccccccCCCCChHHHHHHhcCchhH
Q 009805 279 GTIIAHYPECYDLVDNGGWNVLHFLMVSLHESKLKRLLKDPLYKSFIDEKNEMGNTPLHILATLSARTC 347 (525)
Q Consensus 279 ~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~ll~~~~~~~~in~~d~~G~T~Lh~A~~~~~~~~ 347 (525)
++|++.+++ ++.+|..|+||||+|+..++.++++.|++. +++++.+|.+|+||||+|+..+....
T Consensus 161 ~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---gad~~~~d~~g~t~l~~A~~~~~~~~ 225 (237)
T 3b7b_A 161 EILLAAKCD-LHAVNIHGDSPLHIAARENRYDCVVLFLSR---DSDVTLKNKEGETPLQCASLNSQVWS 225 (237)
T ss_dssp HHHHTTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHTT---TCCTTCCCTTSCCHHHHSCTTCHHHH
T ss_pred HHHHHcCCC-CCCcCCCCCCHHHHHHHhCCHhHHHHHHHc---CCCCCccCCCCCCHHHHHHHHHHHHH
Confidence 999999998 788899999999999999999999999985 45689999999999999999986644
No 24
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=9.5e-39 Score=300.82 Aligned_cols=224 Identities=19% Similarity=0.238 Sum_probs=173.0
Q ss_pred ccCCCCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcCccCCCChHhHHHHHcCCH-HHHHHHHhcCCC
Q 009805 73 QTNAKGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLTNEEENTALHEAVQCGNL-DAVKILMEAGPN 151 (525)
Q Consensus 73 ~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~-~~v~~Ll~~~~~ 151 (525)
.+|.++.+||+.||+.|+.++|++|++.+.+..... ...++..+..|.||||.|+..++. .++++|++.|++
T Consensus 6 kkd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~-------~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gad 78 (269)
T 4b93_B 6 KKDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDA-------EDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLG 78 (269)
T ss_dssp -CCCHHHHHHHHHHHTTCHHHHHHHHTCC-----------------------------------------------CCCC
T ss_pred ccCccchhHHHHHHHcCCHHHHHHHHHCCCcccccc-------cccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCC
Confidence 467778899999999999999999999887632211 123566788999999999988775 588999999999
Q ss_pred CCCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCcccCCCCCCcHH
Q 009805 152 FPYSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAVNSYAADVVEKLLAKKRHLTRERDDCGWTPL 231 (525)
Q Consensus 152 ~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL 231 (525)
++ ..|.+|+||||+|+..|+.+++++|++.+++++..+..|.||+|.|+..++.+++++|++.+++ ++.+|..|+|||
T Consensus 79 vn-~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~-~n~~d~~g~TpL 156 (269)
T 4b93_B 79 VN-VTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAK-PNKKDLSGNTPL 156 (269)
T ss_dssp TT-CCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTCCCHH
T ss_pred CC-CcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCC-CCCCCCCCCCHH
Confidence 87 7788999999999999999999999999999999999999999999999999999999999998 688999999999
Q ss_pred HHHHHcCChhHHHHHhhcCCCcchhcccCCCCcHHHHHHhcCCHHHHHHHHhhCCCccccccCCCCchhHHHHhcCC
Q 009805 232 HHSAYLGLKDITALLLEFDGSSALILDKDRKMTALLMAASQGHESLAGTIIAHYPECYDLVDNGGWNVLHFLMVSLH 308 (525)
Q Consensus 232 ~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~ 308 (525)
|+|+..|+.+++++|+++|+++ +..+. .|.||||+|+..|+.++|++|+++|++ ++.+|.+|+||||+|+++++
T Consensus 157 ~~A~~~g~~~~v~~Ll~~gadv-n~~~~-~g~t~Lh~A~~~g~~~~v~~Ll~~Gad-~~~~d~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 157 IYACSGGHHELVALLLQHGASI-NASNN-KGNTALHEAVIEKHVFVVELLLLHGAS-VQVLNKRQRTAVDCAEQNSK 230 (269)
T ss_dssp HHHHHTTCGGGHHHHHHTTCCT-TCBCT-TSCBHHHHHHHTTCHHHHHHHHHTTCC-SCCCCTTSCCSGGGSCTTCH
T ss_pred HHHHHCCCHHHHHHHHHCCCCC-Ccccc-CCCcHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHhCCc
Confidence 9999999999999999999987 44555 799999999999999999999999998 78899999999999998775
No 25
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=1.4e-37 Score=287.04 Aligned_cols=222 Identities=22% Similarity=0.223 Sum_probs=127.6
Q ss_pred CCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCC
Q 009805 77 KGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFPYSA 156 (525)
Q Consensus 77 ~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~ 156 (525)
.+.||||.|++.|+.+.++.|++.+.. .++.+|..|.||||+|+..|+.+++++|+++|++++ ..
T Consensus 5 ~~~~~l~~A~~~g~~~~v~~ll~~~~~--------------~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~ 69 (231)
T 3aji_A 5 VSNIMICNLAYSGKLDELKERILADKS--------------LATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVN-DK 69 (231)
T ss_dssp CSSSHHHHHHHHTCHHHHHHHHHHCGG--------------GGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSC-CC
T ss_pred cccchHHHHHHhCCHHHHHHHHHhchh--------------hhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCC-Cc
Confidence 345556666666666666555555432 133445555666666666666666666665555544 44
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCcccCCCCCCcHHHHHHH
Q 009805 157 NVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAVNSYAADVVEKLLAKKRHLTRERDDCGWTPLHHSAY 236 (525)
Q Consensus 157 ~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~ 236 (525)
+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..++.+++++|++.+.+ ++.++..|.||||+|+.
T Consensus 70 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~ 148 (231)
T 3aji_A 70 DDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGAN-PDAKDHYDATAMHRAAA 148 (231)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHH
Confidence 55555666666666666666666666655555555566666666666666666666655555 34555556666666666
Q ss_pred cCChhHHHHHhhcCCCcchhcccCCCCcHHHHHHhcCCHHHHHHHHhhCCCccccccCCCCchhHHHHhcCCHHHHHHHh
Q 009805 237 LGLKDITALLLEFDGSSALILDKDRKMTALLMAASQGHESLAGTIIAHYPECYDLVDNGGWNVLHFLMVSLHESKLKRLL 316 (525)
Q Consensus 237 ~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~ll 316 (525)
.|+.+++++|++++.+. +..+. .|.||||+|+..|+.+++++|++++++ ++.+|..|+||||+|+..++.+++++|.
T Consensus 149 ~~~~~~v~~Ll~~g~~~-~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~i~~lL~ 225 (231)
T 3aji_A 149 KGNLKMVHILLFYKAST-NIQDT-EGNTPLHLACDEERVEEAKFLVTQGAS-IYIENKEEKTPLQVAKGGLGLILKRLAE 225 (231)
T ss_dssp HTCHHHHHHHHHTTCCS-CCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHSCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHhcCCCc-cccCC-CCCCHHHHHHHCCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHhhHHHHHHHHHc
Confidence 66666666666655554 22233 455666666666666666666666655 4555666666666666666655555555
Q ss_pred h
Q 009805 317 K 317 (525)
Q Consensus 317 ~ 317 (525)
+
T Consensus 226 ~ 226 (231)
T 3aji_A 226 G 226 (231)
T ss_dssp H
T ss_pred c
Confidence 4
No 26
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=4.9e-37 Score=283.38 Aligned_cols=223 Identities=22% Similarity=0.227 Sum_probs=205.1
Q ss_pred cCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHH
Q 009805 123 NEEENTALHEAVQCGNLDAVKILMEAGPNFPYSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAVN 202 (525)
Q Consensus 123 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~ 202 (525)
+..+++|||.|+..|+.+.++.|++.++......+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+.
T Consensus 3 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 82 (231)
T 3aji_A 3 GCVSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAAS 82 (231)
T ss_dssp CCCSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHH
T ss_pred CccccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHH
Confidence 45688999999999999999999999887666788999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHhcCcCcccCCCCCCcHHHHHHHcCChhHHHHHhhcCCCcchhcccCCCCcHHHHHHhcCCHHHHHHHH
Q 009805 203 SYAADVVEKLLAKKRHLTRERDDCGWTPLHHSAYLGLKDITALLLEFDGSSALILDKDRKMTALLMAASQGHESLAGTII 282 (525)
Q Consensus 203 ~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll 282 (525)
.++.+++++|++.+.+ .+.+|..|.||||+|+..|+.+++++|++++.+. ...+. .|.||||+|+..|+.+++++|+
T Consensus 83 ~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~-~g~t~L~~A~~~~~~~~v~~Ll 159 (231)
T 3aji_A 83 AGXDEIVKALLVKGAH-VNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANP-DAKDH-YDATAMHRAAAKGNLKMVHILL 159 (231)
T ss_dssp HTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT-TSCCHHHHHHHHTCHHHHHHHH
T ss_pred cCHHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCC-CCCcHHHHHHHcCCHHHHHHHH
Confidence 9999999999999988 6788999999999999999999999999999887 44444 7999999999999999999999
Q ss_pred hhCCCccccccCCCCchhHHHHhcCCHHHHHHHhhCccccccccccCCCCChHHHHHHhcCchhH-HHHHH
Q 009805 283 AHYPECYDLVDNGGWNVLHFLMVSLHESKLKRLLKDPLYKSFIDEKNEMGNTPLHILATLSARTC-NEIVR 352 (525)
Q Consensus 283 ~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~ll~~~~~~~~in~~d~~G~T~Lh~A~~~~~~~~-~~ll~ 352 (525)
+++++ ++.+|..|+||||+|+..++.+++++|++. +++++.+|..|.||||+|+..+...+ ..|.+
T Consensus 160 ~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~ 226 (231)
T 3aji_A 160 FYKAS-TNIQDTEGNTPLHLACDEERVEEAKFLVTQ---GASIYIENKEEKTPLQVAKGGLGLILKRLAEG 226 (231)
T ss_dssp HTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHHT---TCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHH
T ss_pred hcCCC-ccccCCCCCCHHHHHHHCCCHHHHHHHHHC---CCCCCCCCCCCCCHHHHHHhhHHHHHHHHHcc
Confidence 99988 788999999999999999999999999995 45689999999999999999887776 55544
No 27
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=1.7e-37 Score=295.47 Aligned_cols=265 Identities=17% Similarity=0.124 Sum_probs=164.2
Q ss_pred cccCCCCchhhhhhhcccccccCCchhhHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCChhHHHHHHHhhhcCChhH
Q 009805 29 VTHNNKHTVLHVNIARQSLKNKEGESVSTKFVEQILEICPSLLIQTNAKGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAM 108 (525)
Q Consensus 29 ~~~~~g~t~Lh~A~~~~~~~~~~g~~~~~~~ll~~~~~~~~~l~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~ 108 (525)
..+.+|.||||+|+.. |+.+++++|++. ...+..++.+|..|.||||+|+..|+.+++++|++.+++
T Consensus 4 ~~d~~g~t~L~~A~~~-------g~~~~v~~Ll~~-g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~----- 70 (282)
T 1oy3_D 4 YVTEDGDTALHLAVIH-------QHEPFLDFLLGF-SAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAG----- 70 (282)
T ss_dssp CCCTTCCCHHHHHHHT-------TCHHHHHHHHHH-HTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-----
T ss_pred ccCCCCCcHHHHHHHc-------CCHHHHHHHHhc-CCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----
Confidence 4677999999999999 999999999873 444445788999999999999999999999999999987
Q ss_pred hhhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCC
Q 009805 109 KCCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFPYSANVNGETPLYMAAARGSKKMVAEILEKCSSAAH 188 (525)
Q Consensus 109 ~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~ 188 (525)
++.+|..|.||||+|+..|+.+++++|++++++....... +. +..+ ...
T Consensus 71 ----------~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~---~~----------------~~~~--~~~ 119 (282)
T 1oy3_D 71 ----------VLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASD---TY----------------LTQS--QDC 119 (282)
T ss_dssp ----------SSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC--------------------------------
T ss_pred ----------CCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHH---HH----------------hhcc--ccc
Confidence 6678999999999999999999999999998875421110 00 0000 011
Q ss_pred CCCCCCcHHHHHHHcCCHHHHH-HHHHhcCcCcccCCCCCCcHHHHHHHcCChhHHHHHhhcCCCcchhcccCCCCcHHH
Q 009805 189 DGPNGKTALHAAVNSYAADVVE-KLLAKKRHLTRERDDCGWTPLHHSAYLGLKDITALLLEFDGSSALILDKDRKMTALL 267 (525)
Q Consensus 189 ~~~~g~t~L~~A~~~~~~~~~~-~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpL~ 267 (525)
....+.++++.+...+...... .+...+.+ .+.++..|.||||+|+..|+.+++++|+++|++... .+...|.||||
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~~g~tpL~ 197 (282)
T 1oy3_D 120 TPDTSHAPAAVDSQPNPENEEEPRDEDWRLQ-LEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNK-PEPTCGRTPLH 197 (282)
T ss_dssp ------------------------CCCGGGG-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTC-CCTTTCCCHHH
T ss_pred Ccchhcchhhhccccccchhhhhhhhhhhhc-CCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCcCHHH
Confidence 1223444555444443332222 22222322 455666666777777776667777777766666532 22224677777
Q ss_pred HHHhcCCHHHHHHHHhhCCCccccccCCCCchhHHHHhcCCHHHHHHHhhCccccccccccCCCCChHHHHHHhcC
Q 009805 268 MAASQGHESLAGTIIAHYPECYDLVDNGGWNVLHFLMVSLHESKLKRLLKDPLYKSFIDEKNEMGNTPLHILATLS 343 (525)
Q Consensus 268 ~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~ll~~~~~~~~in~~d~~G~T~Lh~A~~~~ 343 (525)
+|+..|+.+++++|++++++ ++.+|..|+||||+|+..++.++++.|++. +++++.+|..|.|||++|....
T Consensus 198 ~A~~~~~~~~v~~Ll~~gad-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~---ga~~~~~~~~g~tpl~~a~~~~ 269 (282)
T 1oy3_D 198 LAVEAQAASVLELLLKAGAD-PTARMYGGRTPLGSALLRPNPILARLLRAH---GAPEPEDGGDKLSPCSSSGSDS 269 (282)
T ss_dssp HHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHTSSCHHHHHHHHHT---TCCCCCCC--------------
T ss_pred HHHHcCCHHHHHHHHHcCCC-CcccccCCCCHHHHHHHcCCcHHHHHHHHc---CCCcCcCCCcccccccccCCcc
Confidence 77777777777777777666 566677777777777777777777777763 3446777777777777776653
No 28
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.3e-36 Score=282.05 Aligned_cols=231 Identities=23% Similarity=0.226 Sum_probs=212.5
Q ss_pred cccCCCCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCC
Q 009805 72 IQTNAKGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPN 151 (525)
Q Consensus 72 ~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~ 151 (525)
...|..|.||||.|++.|+.+++++|++.+.+ ++.++..|.||||+|+..|+.+++++|+++|++
T Consensus 3 ~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~---------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~ 67 (240)
T 3eu9_A 3 THIDDYSTWDIVKATQYGIYERCRELVEAGYD---------------VRQPDKENVTLLHWAAINNRIDLVKYYISKGAI 67 (240)
T ss_dssp CCCSCGGGCCHHHHHHTTCHHHHHHHHHTTCC---------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred cccccccchHHHHHHHcCChHHHHHHHHcCCC---------------cCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCc
Confidence 45688899999999999999999999999977 567889999999999999999999999999999
Q ss_pred CCCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCcccCCCCCCcHH
Q 009805 152 FPYSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAVNSYAADVVEKLLAKKRHLTRERDDCGWTPL 231 (525)
Q Consensus 152 ~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL 231 (525)
.....+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|++.+.+ ++.++..|.|||
T Consensus 68 ~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~-~~~~~~~g~t~l 146 (240)
T 3eu9_A 68 VDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQD-VDMMDQNGMTPL 146 (240)
T ss_dssp TTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHH
T ss_pred chhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCC-ccccCCCCCcHH
Confidence 8877777899999999999999999999999999999999999999999999999999999999988 688899999999
Q ss_pred HHHHHcCC-hhHHHHHhhcCCCcchhcccCCCCcHHHHHHhcCCHHHHHHHHhhCCCccccccCCCCchhHHHHhcCCHH
Q 009805 232 HHSAYLGL-KDITALLLEFDGSSALILDKDRKMTALLMAASQGHESLAGTIIAHYPECYDLVDNGGWNVLHFLMVSLHES 310 (525)
Q Consensus 232 ~~A~~~g~-~~~v~~Ll~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~ 310 (525)
|+|+..++ .+++++|++.+.+.... +...|.||||+|+..|+.+++++|++++++ ++.+|..|+||||+|+..++.+
T Consensus 147 ~~a~~~~~~~~~~~~L~~~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~ 224 (240)
T 3eu9_A 147 MWAAYRTHSVDPTRLLLTFNVSVNLG-DKYHKNTALHWAVLAGNTTVISLLLEAGAN-VDAQNIKGESALDLAKQRKNVW 224 (240)
T ss_dssp HHHHHHCCSSTTHHHHHHTTCCTTCC-CTTTCCCHHHHHHHHTCHHHHHHHHHHTCC-TTCBCTTSCBHHHHHHHTTCHH
T ss_pred HHHHHhCChHHHHHHHHhcCCCcchh-hccCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCcHH
Confidence 99997776 89999999999887443 333689999999999999999999999988 7889999999999999999999
Q ss_pred HHHHHhhCcc
Q 009805 311 KLKRLLKDPL 320 (525)
Q Consensus 311 ~~~~ll~~~~ 320 (525)
++++|++...
T Consensus 225 ~v~~L~~~~~ 234 (240)
T 3eu9_A 225 MINHLQEARQ 234 (240)
T ss_dssp HHHHHHHHC-
T ss_pred HHHHHHHhhh
Confidence 9999998543
No 29
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=1.1e-36 Score=280.48 Aligned_cols=220 Identities=25% Similarity=0.274 Sum_probs=180.0
Q ss_pred CCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcC--CCCCCC
Q 009805 78 GDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAG--PNFPYS 155 (525)
Q Consensus 78 g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~--~~~~~~ 155 (525)
|+||||.|++.|+.+++++|++.+.+. .+.+|..|.||||+|+..|+.+++++|+++| +++...
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~--------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 67 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSL--------------LLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDY 67 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGG--------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGC
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccc--------------cccCCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccc
Confidence 689999999999999999999987652 3457888999999999999999999999998 555433
Q ss_pred CCCCCchHHHHHHHcCCHHHHHHHHHhc--CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCcccCCCCCCcHHHH
Q 009805 156 ANVNGETPLYMAAARGSKKMVAEILEKC--SSAAHDGPNGKTALHAAVNSYAADVVEKLLAKKRHLTRERDDCGWTPLHH 233 (525)
Q Consensus 156 ~~~~g~tpL~~A~~~g~~~~v~~Ll~~~--~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~ 233 (525)
.+..|.||||+|+..|+.+++++|+++| ++++..+..|.||||+|+..++.+++++|++.+.+ ++.+|..|.||||+
T Consensus 68 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~ 146 (228)
T 2dzn_A 68 PDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGAS-VRIKDKFNQIPLHR 146 (228)
T ss_dssp CCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-SCCCCTTSCCHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCC-ccccCCCCCCHHHH
Confidence 6788999999999999999999999988 78888888899999999999999999999998887 57788888888888
Q ss_pred HHHcCChhHHHHHhhcCCCcchhcccCCCCcHHHHHHhcCCHHHHHHHH-hhCCCccccccCCCCchhHHHHhcCCHHHH
Q 009805 234 SAYLGLKDITALLLEFDGSSALILDKDRKMTALLMAASQGHESLAGTII-AHYPECYDLVDNGGWNVLHFLMVSLHESKL 312 (525)
Q Consensus 234 A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll-~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~ 312 (525)
|+..|+.+++++|++++....+..+. .|.||||+|+..|+.+++++|+ +.+++ ++.+|.+|+||||+|+..+ +.
T Consensus 147 A~~~~~~~~v~~Ll~~g~~~~~~~d~-~g~t~L~~A~~~~~~~~v~~Ll~~~ga~-~~~~~~~g~t~l~~A~~~~---~~ 221 (228)
T 2dzn_A 147 AASVGSLKLIELLCGLGKSAVNWQDK-QGWTPLFHALAEGHGDAAVLLVEKYGAE-YDLVDNKGAKAEDVALNEQ---VK 221 (228)
T ss_dssp HHHTTCHHHHHHHHTTTCCCSCCCCT-TSCCHHHHHHHTTCHHHHHHHHHHHCCC-SCCBCTTSCBGGGGCSSTT---HH
T ss_pred HHHcCCHHHHHHHHhcCcccccCcCC-CCCCHHHHHHHcCCHHHHHHHHHhcCCC-CCccCCCCCcHHHHHHHHH---HH
Confidence 88888888888888888333244454 6888888888888888888888 77777 6778888888888886653 34
Q ss_pred HHHhh
Q 009805 313 KRLLK 317 (525)
Q Consensus 313 ~~ll~ 317 (525)
++|++
T Consensus 222 ~~l~~ 226 (228)
T 2dzn_A 222 KFFLN 226 (228)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 44443
No 30
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=1.6e-37 Score=298.43 Aligned_cols=249 Identities=20% Similarity=0.216 Sum_probs=203.4
Q ss_pred CCCCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCC
Q 009805 75 NAKGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFPY 154 (525)
Q Consensus 75 ~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~ 154 (525)
+..|.||||.||..|+.++|++|++.+.+ ++..|..|.||||+|+..|+.+++++|+++|++++
T Consensus 37 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~---------------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~- 100 (299)
T 1s70_B 37 KFDDGAVFLAACSSGDTEEVLRLLERGAD---------------INYANVDGLTALHQACIDDNVDMVKFLVENGANIN- 100 (299)
T ss_dssp EECHHHHHHHHHHHTCHHHHHHHHHHCCC---------------TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTT-
T ss_pred ccCCccHHHHHHHcCCHHHHHHHHHcCCC---------------CcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-
Confidence 45678999999999999999999999887 66788999999999999999999999999999976
Q ss_pred CCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCcccCCCCCCcHHHHH
Q 009805 155 SANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAVNSYAADVVEKLLAKKRHLTRERDDCGWTPLHHS 234 (525)
Q Consensus 155 ~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A 234 (525)
..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.++++.++.......+..+..+.++++
T Consensus 101 ~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~-- 178 (299)
T 1s70_B 101 QPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIML-- 178 (299)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHH--
T ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHH--
Confidence 678899999999999999999999999999999999999999999999999999998887654433332222223322
Q ss_pred HHcCChhHHHHHhhcCCCcchhcccCCCCcHHHHHHhcCCHHHHHHHHhhCCCccccccCCCCchhHHHHhcCCHHHHHH
Q 009805 235 AYLGLKDITALLLEFDGSSALILDKDRKMTALLMAASQGHESLAGTIIAHYPECYDLVDNGGWNVLHFLMVSLHESKLKR 314 (525)
Q Consensus 235 ~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~ 314 (525)
..++.++..+.......+. .|.||||+|+..|+.+++++|++++++ ++.+|..|+||||+|+..++.++++.
T Consensus 179 ------~~~~~~l~~~~~~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~d-~~~~d~~g~tpL~~A~~~~~~~~v~~ 250 (299)
T 1s70_B 179 ------RDARQWLNSGHINDVRHAK-SGGTALHVAAAKGYTEVLKLLIQARYD-VNIKDYDGWTPLHAAAHWGKEEACRI 250 (299)
T ss_dssp ------HHHHHHHHHTCCCCCCCTT-TCCCHHHHHHHHTCHHHHHHHHTTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred ------HHHHHHHhccCcchhhhcC-CCCCHHHHHHHCCcHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHhcCCHHHHHH
Confidence 3344555555554343333 688999999999999999999998888 77888999999999999999999999
Q ss_pred HhhCccccccccccCCCCChHHHHHHhcCchhHHHHHH
Q 009805 315 LLKDPLYKSFIDEKNEMGNTPLHILATLSARTCNEIVR 352 (525)
Q Consensus 315 ll~~~~~~~~in~~d~~G~T~Lh~A~~~~~~~~~~ll~ 352 (525)
|++. +++++.+|..|+||||+|+......+..+++
T Consensus 251 Ll~~---gad~~~~d~~g~t~l~~A~~~~~~~l~~l~~ 285 (299)
T 1s70_B 251 LVEN---LCDMEAVNKVGQTAFDVADEDILGYLEELQK 285 (299)
T ss_dssp HHHT---TCCTTCCCTTSCCTTTSCCSGGGHHHHHHHH
T ss_pred HHHc---CCCCCCcCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9985 3568888999999999997755555555555
No 31
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=1.8e-36 Score=278.91 Aligned_cols=211 Identities=21% Similarity=0.239 Sum_probs=187.5
Q ss_pred CChHhHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHhc--CCCCC-CCCCCCcHHHHHHH
Q 009805 126 ENTALHEAVQCGNLDAVKILMEAGPNFPYSANVNGETPLYMAAARGSKKMVAEILEKC--SSAAH-DGPNGKTALHAAVN 202 (525)
Q Consensus 126 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~--~~~~~-~~~~g~t~L~~A~~ 202 (525)
|+||||+|+..|+.++++.|++.+++.....+..|.||||+|+..|+.+++++|+++| .+++. .+..|.||||+|+.
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~ 81 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS 81 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHH
Confidence 7899999999999999999999999877678899999999999999999999999999 55555 78899999999999
Q ss_pred cCCHHHHHHHHHhc--CcCcccCCCCCCcHHHHHHHcCChhHHHHHhhcCCCcchhcccCCCCcHHHHHHhcCCHHHHHH
Q 009805 203 SYAADVVEKLLAKK--RHLTRERDDCGWTPLHHSAYLGLKDITALLLEFDGSSALILDKDRKMTALLMAASQGHESLAGT 280 (525)
Q Consensus 203 ~~~~~~~~~Ll~~~--~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~ 280 (525)
.|+.+++++|++.+ ++ .+..+..|.||||+|+..|+.+++++|+++|.+. ...+. .|.||||+|+..|+.+++++
T Consensus 82 ~~~~~~~~~Ll~~g~~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~-~g~t~L~~A~~~~~~~~v~~ 158 (228)
T 2dzn_A 82 VGNLEVVKSLYDRPLKPD-LNKITNQGVTCLHLAVGKKWFEVSQFLIENGASV-RIKDK-FNQIPLHRAASVGSLKLIEL 158 (228)
T ss_dssp HCCHHHHHHHHSSSSCCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCS-CCCCT-TSCCHHHHHHHTTCHHHHHH
T ss_pred cCCHHHHHHHHhCCCCcc-cccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCc-cccCC-CCCCHHHHHHHcCCHHHHHH
Confidence 99999999999988 55 5778889999999999999999999999998887 44444 68999999999999999999
Q ss_pred HHhhCCCccccccCCCCchhHHHHhcCCHHHHHHHh-hCccccccccccCCCCChHHHHHHhc
Q 009805 281 IIAHYPECYDLVDNGGWNVLHFLMVSLHESKLKRLL-KDPLYKSFIDEKNEMGNTPLHILATL 342 (525)
Q Consensus 281 Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~ll-~~~~~~~~in~~d~~G~T~Lh~A~~~ 342 (525)
|++.++..++.+|..|+||||+|+..++.++++.|+ + .+++++.+|..|.||||+|+..
T Consensus 159 Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~---~ga~~~~~~~~g~t~l~~A~~~ 218 (228)
T 2dzn_A 159 LCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEK---YGAEYDLVDNKGAKAEDVALNE 218 (228)
T ss_dssp HHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHH---HCCCSCCBCTTSCBGGGGCSST
T ss_pred HHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHh---cCCCCCccCCCCCcHHHHHHHH
Confidence 999995558889999999999999999999999999 5 3456899999999999999764
No 32
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.4e-37 Score=290.21 Aligned_cols=217 Identities=22% Similarity=0.219 Sum_probs=172.2
Q ss_pred CccCCCChHhHHHHHcCCHHHHHHHHhcCCCCC-------CCCCCCCchHHHHHHHcCCH-HHHHHHHHhcCCCCCCCCC
Q 009805 121 LTNEEENTALHEAVQCGNLDAVKILMEAGPNFP-------YSANVNGETPLYMAAARGSK-KMVAEILEKCSSAAHDGPN 192 (525)
Q Consensus 121 ~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~-------~~~~~~g~tpL~~A~~~g~~-~~v~~Ll~~~~~~~~~~~~ 192 (525)
.+|..+.++|+.|+..|+.++|++|++.+++.. ...+..+.|||+.|+..++. .++++|++.|++++.+|.+
T Consensus 6 kkd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~ 85 (269)
T 4b93_B 6 KKDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQD 85 (269)
T ss_dssp -CCCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTCCCTT
T ss_pred ccCccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCC
Confidence 367788899999999999999999999887532 24566789999999988775 4889999999999999999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhcCcCcccCCCCCCcHHHHHHHcCChhHHHHHhhcCCCcchhcccCCCCcHHHHHHhc
Q 009805 193 GKTALHAAVNSYAADVVEKLLAKKRHLTRERDDCGWTPLHHSAYLGLKDITALLLEFDGSSALILDKDRKMTALLMAASQ 272 (525)
Q Consensus 193 g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpL~~A~~~ 272 (525)
|.||||+|+..|+.+++++|++.+++ ++.++..|.||+|+|+..++.+++++|+++|+++ +..+. .|.||||+|+..
T Consensus 86 G~TpLh~A~~~g~~~~v~~Ll~~~a~-~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-n~~d~-~g~TpL~~A~~~ 162 (269)
T 4b93_B 86 GSSPLHVAALHGRADLIPLLLKHGAN-AGARNADQAVPLHLACQQGHFQVVKCLLDSNAKP-NKKDL-SGNTPLIYACSG 162 (269)
T ss_dssp SCCHHHHHHHTTCTTHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCT-TCCCHHHHHHHT
T ss_pred CCCHHHHHHHcCcHHHHHHHHhcCCC-cCccCCCCCCccccccccChHHHHHHHHHCCCCC-CCCCC-CCCCHHHHHHHC
Confidence 99999999999999999999999998 6888999999999999999999999999999887 44555 799999999999
Q ss_pred CCHHHHHHHHhhCCCccccccCCCCchhHHHHhcCCHHHHHHHhhCccccccccccCCCCChHHHHHHhcCc
Q 009805 273 GHESLAGTIIAHYPECYDLVDNGGWNVLHFLMVSLHESKLKRLLKDPLYKSFIDEKNEMGNTPLHILATLSA 344 (525)
Q Consensus 273 g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~ll~~~~~~~~in~~d~~G~T~Lh~A~~~~~ 344 (525)
|+.+++++|++++++ ++.+|..|+||||+|+..|+.++++.|++. ++++|.+|.+|+||||+|++++.
T Consensus 163 g~~~~v~~Ll~~gad-vn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~---Gad~~~~d~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 163 GHHELVALLLQHGAS-INASNNKGNTALHEAVIEKHVFVVELLLLH---GASVQVLNKRQRTAVDCAEQNSK 230 (269)
T ss_dssp TCGGGHHHHHHTTCC-TTCBCTTSCBHHHHHHHTTCHHHHHHHHHT---TCCSCCCCTTSCCSGGGSCTTCH
T ss_pred CCHHHHHHHHHCCCC-CCccccCCCcHHHHHHHcCCHHHHHHHHHC---CCCCCCcCCCCCCHHHHHHhCCc
Confidence 999999999999998 788999999999999999999999999985 46799999999999999998764
No 33
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=7.6e-37 Score=293.72 Aligned_cols=282 Identities=21% Similarity=0.172 Sum_probs=228.2
Q ss_pred HHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCchH
Q 009805 84 AAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFPYSANVNGETP 163 (525)
Q Consensus 84 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tp 163 (525)
.+++.++.+.++.++............ ......+..|.||||.|+..|+.+++++|+++|++++ ..+..|.||
T Consensus 4 ~~a~~~~~~~l~~~~~~~~~~~~~~~~------~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~ 76 (299)
T 1s70_B 4 ADAKQKRNEQLKRWIGSETDLEPPVVK------RKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGADIN-YANVDGLTA 76 (299)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCCSCCC------CSCCCCEECHHHHHHHHHHHTCHHHHHHHHHHCCCTT-CBCTTCCBH
T ss_pred hHHHHHHHHHHHHHHcccccccccccc------CcccccccCCccHHHHHHHcCCHHHHHHHHHcCCCCc-ccCCCCCCH
Confidence 567778888888888776543211100 0012235578899999999999999999999999987 678899999
Q ss_pred HHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCcccCCCCCCcHHHHHHHcCChhHH
Q 009805 164 LYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAVNSYAADVVEKLLAKKRHLTRERDDCGWTPLHHSAYLGLKDIT 243 (525)
Q Consensus 164 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v 243 (525)
||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|++.+++ ++..+..|.||||+|+..++.+++
T Consensus 77 L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~ 155 (299)
T 1s70_B 77 LHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAH-VGAVNSEGDTPLDIAEEEAMEELL 155 (299)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHCCSHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC-CCCcCCCCCCHHHHHHhcchHHHH
Confidence 9999999999999999999999999999999999999999999999999999988 678899999999999999999999
Q ss_pred HHHhhcCCCcchhcccCCCCcHHHHHHhcCCHHHHHHHHhhCCCccccccCCCCchhHHHHhcCCHHHHHHHhhCccccc
Q 009805 244 ALLLEFDGSSALILDKDRKMTALLMAASQGHESLAGTIIAHYPECYDLVDNGGWNVLHFLMVSLHESKLKRLLKDPLYKS 323 (525)
Q Consensus 244 ~~Ll~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~ll~~~~~~~ 323 (525)
+.++............ .+.++++ ..+..++..+.......+..|+||||+|+..|+.++++.|++. ++
T Consensus 156 ~~ll~~~~~~~~~~~~-~~~~~~~--------~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~---g~ 223 (299)
T 1s70_B 156 QNEVNRQGVDIEAARK-EEERIML--------RDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQA---RY 223 (299)
T ss_dssp HHHHHHHTCCHHHHHH-HHHHHHH--------HHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTT---TC
T ss_pred HHHHhhcCCCchhhhh-hhhhHHH--------HHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHc---CC
Confidence 9988754332222222 2223333 3455667777665666788999999999999999999999985 45
Q ss_pred cccccCCCCChHHHHHHhcCchhH-HHHHHHhCCCChHHHhccCCChHHHHhhcCCCccchhhhHHHHhhc
Q 009805 324 FIDEKNEMGNTPLHILATLSARTC-NEIVRQIGKGDTQAVNKKKISVKHIELYGCPELQGEIQGLSENIGR 393 (525)
Q Consensus 324 ~in~~d~~G~T~Lh~A~~~~~~~~-~~ll~~~~~~d~~~~n~~g~t~l~~a~~~~~~~~~~~~~~~~~l~~ 393 (525)
++|.+|..|+||||+|+..+...+ ..|++ .|+|++.+|..|+||+++|.+. ..+.+.+++++
T Consensus 224 d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~--~gad~~~~d~~g~t~l~~A~~~------~~~~l~~l~~~ 286 (299)
T 1s70_B 224 DVNIKDYDGWTPLHAAAHWGKEEACRILVE--NLCDMEAVNKVGQTAFDVADED------ILGYLEELQKK 286 (299)
T ss_dssp CTTCCCTTCCCHHHHHHHTTCHHHHHHHHH--TTCCTTCCCTTSCCTTTSCCSG------GGHHHHHHHHH
T ss_pred CCCCcCCCCCcHHHHHHhcCCHHHHHHHHH--cCCCCCCcCCCCCCHHHHHHHH------HHHHHHHHHHH
Confidence 699999999999999999987666 77887 8999999999999999999742 34444444444
No 34
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=9.6e-36 Score=273.15 Aligned_cols=215 Identities=17% Similarity=0.140 Sum_probs=180.0
Q ss_pred CCcchhhhhhhhccccccc-cCCCCchhhhhhhcccccccCCchhhHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCC
Q 009805 12 GEIEPFNGIAKDNLRSIVT-HNNKHTVLHVNIARQSLKNKEGESVSTKFVEQILEICPSLLIQTNAKGDSPLHAAAKCGR 90 (525)
Q Consensus 12 g~~~~v~~ll~~~~~~~~~-~~~g~t~Lh~A~~~~~~~~~~g~~~~~~~ll~~~~~~~~~l~~~~~~g~tpLh~A~~~g~ 90 (525)
|+.+++++|+++|.+.+.. +.+|.||||+|+.. |+.+++++|++. +..++..|..|.||||+|+..|+
T Consensus 2 g~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~-------g~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~A~~~~~ 70 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLHNQTDRTGETALHLAARY-------SRSDAAKRLLEA----SADANIQDNMGRTPLHAAVSADA 70 (223)
T ss_dssp ---CCEETTEETTCCTTCCCTTTCCCHHHHHHHT-------TCHHHHHHHHHT----TCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CcHHHHHHHHHcCCCcccccCCCCCchHHHHHHc-------CCHHHHHHHHHc----CCCCCCcCCCCCCHHHHHHHcCC
Confidence 7888999999988877654 66889999999999 999999998763 56677788889999999999999
Q ss_pred hhHHHHHHHhhhcCChhHhhhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCchHHHHHHHc
Q 009805 91 PAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFPYSANVNGETPLYMAAAR 170 (525)
Q Consensus 91 ~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~ 170 (525)
.+++++|++.+... ++..+..|.||||+|+..|+.+++++|+++|++++ ..+..|.||||+|+..
T Consensus 71 ~~~v~~Ll~~~~~~--------------~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~ 135 (223)
T 2f8y_A 71 QGVFQILIRNRATD--------------LDARMHDGTTPLILAARLAVEGMLEDLINSHADVN-AVDDLGKSALHWAAAV 135 (223)
T ss_dssp HHHHHHHHHBTTSC--------------TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT-CBCTTSCBHHHHHHHT
T ss_pred HHHHHHHHHcCCCC--------------cccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCc-CcCCCCCcHHHHHHHc
Confidence 99999999887631 45678888999999999999999999999888876 6677888999999999
Q ss_pred CCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCcccCCCCCCcHHHHHHHcCChhHHHHHhhcC
Q 009805 171 GSKKMVAEILEKCSSAAHDGPNGKTALHAAVNSYAADVVEKLLAKKRHLTRERDDCGWTPLHHSAYLGLKDITALLLEFD 250 (525)
Q Consensus 171 g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~ 250 (525)
|+.+++++|+++|++++.++..|.||||+|+..++.+++++|++++++ ++.+|..|.||||+|+..++.+++++|+++|
T Consensus 136 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g 214 (223)
T 2f8y_A 136 NNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFAN-RDITDHMDRLPRDIAQERMHHDIVRLLDEYN 214 (223)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCC-CccccccCCCHHHHHHHhcchHHHHHHHHcC
Confidence 999999999999988888888899999999998999999999988887 5778888888888888888888888888887
Q ss_pred CCc
Q 009805 251 GSS 253 (525)
Q Consensus 251 ~~~ 253 (525)
...
T Consensus 215 ~~~ 217 (223)
T 2f8y_A 215 LVR 217 (223)
T ss_dssp CSS
T ss_pred CCc
Confidence 754
No 35
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=5.6e-36 Score=285.08 Aligned_cols=218 Identities=18% Similarity=0.154 Sum_probs=132.8
Q ss_pred ccccCCCCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCC
Q 009805 71 LIQTNAKGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGP 150 (525)
Q Consensus 71 l~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~ 150 (525)
++.+|..|.||||+|+..|+.++|++|++.+++ ++.. +|.||||+|+..|+.+++++|+++|+
T Consensus 24 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~---------------~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga 86 (285)
T 3kea_A 24 TFKADVHGHSASYYAIADNNVRLVCTLLNAGAL---------------KNLL--ENEFPLHQAATLEDTKIVKILLFSGL 86 (285)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGG---------------GSCC--TTCCHHHHHTTSSSCHHHHHHHHTTC
T ss_pred CCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCC---------------CCCC--CCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 455666666666666666666666666666654 2222 36666666666666666666666666
Q ss_pred CCCCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCC-CcHHHHHHHcCCHHHHHHHHHhcCcCcccCCCCCCc
Q 009805 151 NFPYSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNG-KTALHAAVNSYAADVVEKLLAKKRHLTRERDDCGWT 229 (525)
Q Consensus 151 ~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g-~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t 229 (525)
+++ ..+..|.||||+|+..|+.+++++|+++|++++..+..| .||||+|+..|+.+++++|++.+++.... ..|.|
T Consensus 87 ~~~-~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~--~~g~t 163 (285)
T 3kea_A 87 DDS-QFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL--AILLS 163 (285)
T ss_dssp CTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC--STHHH
T ss_pred CCC-CcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc--cCCcc
Confidence 654 455566666666666666666666666666666666666 56666666666666666666666553111 15666
Q ss_pred HHHHHHHcCChhHHHHHhhcCCCcchhcccCCCCcH-HHHHHhcCCHHHHHHHHhhCCCccccccCCCCchhHHHHhcCC
Q 009805 230 PLHHSAYLGLKDITALLLEFDGSSALILDKDRKMTA-LLMAASQGHESLAGTIIAHYPECYDLVDNGGWNVLHFLMVSLH 308 (525)
Q Consensus 230 pL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tp-L~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~ 308 (525)
|||+|+..|+.+++++|+++|++. +..+. .|.|| ||+|+..|+.+++++|+++|++ ++..| +.|+..++
T Consensus 164 ~L~~A~~~g~~~~v~~Ll~~gad~-n~~~~-~g~t~~L~~A~~~~~~~~v~~Ll~~gad-~~~~~-------~~a~~~~~ 233 (285)
T 3kea_A 164 CIHITIKNGHVDMMILLLDYMTST-NTNNS-LLFIPDIKLAIDNKDIEMLQALFKYDIN-IYSAN-------LENVLLDD 233 (285)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHT-CTTCC-CBCCTTHHHHHHHTCHHHHHHHTTSCBC-STTTT-------GGGGTTTC
T ss_pred HHHHHHHcChHHHHHHHHHcCCCC-CcccC-CCCChHHHHHHHcCCHHHHHHHHHcCCC-CCCCC-------hhhhhcCC
Confidence 666666666666666666666554 33333 45565 6666666666666666666665 33333 24555666
Q ss_pred HHHHHHHhhC
Q 009805 309 ESKLKRLLKD 318 (525)
Q Consensus 309 ~~~~~~ll~~ 318 (525)
.+++++|++.
T Consensus 234 ~~iv~~Ll~~ 243 (285)
T 3kea_A 234 AEIAKMIIEK 243 (285)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHc
Confidence 6666666664
No 36
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=1e-35 Score=283.19 Aligned_cols=234 Identities=18% Similarity=0.083 Sum_probs=204.0
Q ss_pred hcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHH
Q 009805 119 LGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFPYSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALH 198 (525)
Q Consensus 119 l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~ 198 (525)
++.+|..|.||||+|+..|+.+++++|+++|++++.. +|.||||+|+..|+.+++++|+++|++++.++..|.||||
T Consensus 24 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~---~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~ 100 (285)
T 3kea_A 24 TFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLL---ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALY 100 (285)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC---TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHH
Confidence 4578999999999999999999999999999987643 4999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHhcCcCcccCCCCC-CcHHHHHHHcCChhHHHHHhhcCCCcchhcccCCCCcHHHHHHhcCCHHH
Q 009805 199 AAVNSYAADVVEKLLAKKRHLTRERDDCG-WTPLHHSAYLGLKDITALLLEFDGSSALILDKDRKMTALLMAASQGHESL 277 (525)
Q Consensus 199 ~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g-~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~ 277 (525)
+|+..|+.+++++|++.+++ ++.++..| .||||+|+..|+.+++++|++++++... ...|.||||+|+..|+.++
T Consensus 101 ~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~---~~~g~t~L~~A~~~g~~~~ 176 (285)
T 3kea_A 101 YAVDSGNMQTVKLFVKKNWR-LMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFD---LAILLSCIHITIKNGHVDM 176 (285)
T ss_dssp HHHHTTCHHHHHHHHHHCGG-GGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCC---CSTHHHHHHHHHHTTCHHH
T ss_pred HHHHcCCHHHHHHHHhcCCC-CCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcccc---ccCCccHHHHHHHcChHHH
Confidence 99999999999999999998 67888888 7999999999999999999999987622 2268999999999999999
Q ss_pred HHHHHhhCCCccccccCCCCch-hHHHHhcCCHHHHHHHhhCccccccccccCCCCChHHHHHHhcCchhH-HHHHHHhC
Q 009805 278 AGTIIAHYPECYDLVDNGGWNV-LHFLMVSLHESKLKRLLKDPLYKSFIDEKNEMGNTPLHILATLSARTC-NEIVRQIG 355 (525)
Q Consensus 278 v~~Ll~~~~~~~~~~d~~g~t~-Lh~A~~~~~~~~~~~ll~~~~~~~~in~~d~~G~T~Lh~A~~~~~~~~-~~ll~~~~ 355 (525)
+++|++++++ ++.+|..|+|| ||+|+..++.+++++|++. +++++.+|. .|+..+...+ ..|++ .
T Consensus 177 v~~Ll~~gad-~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~---gad~~~~~~-------~a~~~~~~~iv~~Ll~--~ 243 (285)
T 3kea_A 177 MILLLDYMTS-TNTNNSLLFIPDIKLAIDNKDIEMLQALFKY---DINIYSANL-------ENVLLDDAEIAKMIIE--K 243 (285)
T ss_dssp HHHHHHHHHH-TCTTCCCBCCTTHHHHHHHTCHHHHHHHTTS---CBCSTTTTG-------GGGTTTCHHHHHHHHH--H
T ss_pred HHHHHHcCCC-CCcccCCCCChHHHHHHHcCCHHHHHHHHHc---CCCCCCCCh-------hhhhcCCHHHHHHHHH--c
Confidence 9999999988 78899999998 9999999999999999985 455788773 5566665555 78887 5
Q ss_pred CCChHHHhccCCChHHHHh
Q 009805 356 KGDTQAVNKKKISVKHIEL 374 (525)
Q Consensus 356 ~~d~~~~n~~g~t~l~~a~ 374 (525)
|++++. ......+++..
T Consensus 244 g~~~~~--~~~~~~~~~~~ 260 (285)
T 3kea_A 244 HVEYKS--DSYTKDLDIVK 260 (285)
T ss_dssp HHHHTT--CTTTTTCHHHH
T ss_pred CCCCCC--ccccchHHHHh
Confidence 665443 33445566665
No 37
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=3.1e-35 Score=269.72 Aligned_cols=215 Identities=22% Similarity=0.215 Sum_probs=168.9
Q ss_pred CchhhHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcCccCCCChHhH
Q 009805 52 GESVSTKFVEQILEICPSLLIQTNAKGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLTNEEENTALH 131 (525)
Q Consensus 52 g~~~~~~~ll~~~~~~~~~l~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh 131 (525)
|+.+++++|++ .+.......|..|.||||+|+..|+.+++++|++.+.+ ++.+|..|.||||
T Consensus 2 g~~~~i~~Ll~---~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~---------------~~~~~~~g~t~L~ 63 (223)
T 2f8y_A 2 DAPAVISDFIY---QGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASAD---------------ANIQDNMGRTPLH 63 (223)
T ss_dssp ---CCEETTEE---TTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC---------------TTCCCTTSCCHHH
T ss_pred CcHHHHHHHHH---cCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCC---------------CCCcCCCCCCHHH
Confidence 66777777743 34444444578888888888888888888888888776 5567888888888
Q ss_pred HHHHcCCHHHHHHHHhcCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHcCCHHHHHH
Q 009805 132 EAVQCGNLDAVKILMEAGPNFPYSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAVNSYAADVVEK 211 (525)
Q Consensus 132 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ 211 (525)
+|+..|+.+++++|+++++......+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++
T Consensus 64 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 143 (223)
T 2f8y_A 64 AAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVV 143 (223)
T ss_dssp HHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHH
Confidence 88888888888888888874444677788888888888888888888888888888888888888888888888888888
Q ss_pred HHHhcCcCcccCCCCCCcHHHHHHHcCChhHHHHHhhcCCCcchhcccCCCCcHHHHHHhcCCHHHHHHHHhhCCC
Q 009805 212 LLAKKRHLTRERDDCGWTPLHHSAYLGLKDITALLLEFDGSSALILDKDRKMTALLMAASQGHESLAGTIIAHYPE 287 (525)
Q Consensus 212 Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ 287 (525)
|++.+.+ ++.+|..|.||||+|+..|+.+++++|+++|++. ...+. .|.|||++|+..|+.+++++|++++..
T Consensus 144 Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~-~g~t~l~~A~~~~~~~i~~~L~~~g~~ 216 (223)
T 2f8y_A 144 LLKNGAN-KDMQNNREETPLFLAAREGSYETAKVLLDHFANR-DITDH-MDRLPRDIAQERMHHDIVRLLDEYNLV 216 (223)
T ss_dssp HHHTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCT-TCCCHHHHHHHTTCHHHHHHHHHTTCS
T ss_pred HHHcCCC-CCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCC-ccccc-cCCCHHHHHHHhcchHHHHHHHHcCCC
Confidence 8888877 5777788888888888888888888888887766 33444 677888888888888888888887765
No 38
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=1.1e-36 Score=295.96 Aligned_cols=267 Identities=15% Similarity=0.048 Sum_probs=174.0
Q ss_pred CchhhHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhhhhh--HHHhcCccCCCChH
Q 009805 52 GESVSTKFVEQILEICPSLLIQTNAKGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTA--WQMLGLTNEEENTA 129 (525)
Q Consensus 52 g~~~~~~~ll~~~~~~~~~l~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~--~~~l~~~~~~g~t~ 129 (525)
...+++++|++ .+..++..+..|.|+++ |+.++|+.|+++|.++....-...... ..--..+.....+.
T Consensus 30 ~~~dlv~~ll~----~ga~i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 100 (327)
T 1sw6_A 30 FTHDLTSDFLS----SPLKIMKALPSPVVNDN-----EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQ 100 (327)
T ss_dssp CCTTCCCSTTT----SSCCCEECBCCCCCCCH-----HHHHHHHHHHHHHHC----------------------------
T ss_pred hcCchHHHHhh----CCcccccCCCCCCcccC-----chhHHHHHHHHhccCCccccchHhhhcccccccccccCCccch
Confidence 55677888865 47888999999999988 999999999999987422100000000 00000011122334
Q ss_pred hHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHcCC---H
Q 009805 130 LHEAVQCGNLDAVKILMEAGPNFPYSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAVNSYA---A 206 (525)
Q Consensus 130 Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~---~ 206 (525)
+|.|+..+..+++++|++.|.+++...+..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+ .
T Consensus 101 ~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~ 180 (327)
T 1sw6_A 101 QHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDS 180 (327)
T ss_dssp ---CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHT
T ss_pred hHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccH
Confidence 5888888888999999999999885478899999999999999999999999999999999999999999999888 6
Q ss_pred HHHHHHHHhcCcCcccCCCCCCcHHHHHHH----cCChhHHHHHhhcCC--------------------CcchhcccCCC
Q 009805 207 DVVEKLLAKKRHLTRERDDCGWTPLHHSAY----LGLKDITALLLEFDG--------------------SSALILDKDRK 262 (525)
Q Consensus 207 ~~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~----~g~~~~v~~Ll~~~~--------------------~~~~~~~~~~g 262 (525)
++++.|++.+....+.+|..|+||||+|+. .|+.+++++|++.+. ++ ...+. .|
T Consensus 181 ~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~-~~~~~-~g 258 (327)
T 1sw6_A 181 GTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKP-NDKNG-ER 258 (327)
T ss_dssp TCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC-----------------
T ss_pred HHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCc-ccccc-cC
Confidence 778888887744478888999999999998 888999999987642 22 22222 45
Q ss_pred CcHHHHHHhcCCHHHHHHHHhhCCCccccccCCCCchhHHHHhcCCHHHHHHHhhCccccccccccCCCCChHHHHHHh
Q 009805 263 MTALLMAASQGHESLAGTIIAHYPECYDLVDNGGWNVLHFLMVSLHESKLKRLLKDPLYKSFIDEKNEMGNTPLHILAT 341 (525)
Q Consensus 263 ~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~ll~~~~~~~~in~~d~~G~T~Lh~A~~ 341 (525)
.||||.|+. +++|++++ ++.+|..|+||||+|+..|+.+++++|++. +++++.+|..|+||||+|++
T Consensus 259 ~t~L~~a~~------~~~Ll~~~---~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~---Gad~~~~d~~G~TpL~~A~~ 325 (327)
T 1sw6_A 259 KDSILENLD------LKWIIANM---LNAQDSNGDTCLNIAARLGNISIVDALLDY---GADPFIANKSGLRPVDFGAG 325 (327)
T ss_dssp -CHHHHHCS------HHHHHHHT---TTCCCTTSCCHHHHHHHHCCHHHHHHHHHT---TCCTTCCCTTSCCGGGGTCC
T ss_pred CChhHHHHH------HHHHHHhC---CCCCCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCcccCCCCCCHHHHHHh
Confidence 555555543 45555542 344455555555555555555555555542 23355555555555555544
No 39
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=5.5e-35 Score=271.04 Aligned_cols=229 Identities=21% Similarity=0.147 Sum_probs=202.0
Q ss_pred ccCCCCchhhhhhhcccccccCCchhhHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCChhHHHHHHHhhhcCChhHh
Q 009805 30 THNNKHTVLHVNIARQSLKNKEGESVSTKFVEQILEICPSLLIQTNAKGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMK 109 (525)
Q Consensus 30 ~~~~g~t~Lh~A~~~~~~~~~~g~~~~~~~ll~~~~~~~~~l~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~ 109 (525)
.|..|.++||.|++. |+.+++++|++ .+.+++.++..|.||||+|+..|+.+++++|++.+.+..
T Consensus 5 ~d~~~~~~l~~A~~~-------g~~~~~~~Ll~----~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~---- 69 (240)
T 3eu9_A 5 IDDYSTWDIVKATQY-------GIYERCRELVE----AGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVD---- 69 (240)
T ss_dssp CSCGGGCCHHHHHHT-------TCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT----
T ss_pred cccccchHHHHHHHc-------CChHHHHHHHH----cCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcch----
Confidence 455789999999999 99999999976 356778889999999999999999999999999987632
Q ss_pred hhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCC
Q 009805 110 CCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFPYSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHD 189 (525)
Q Consensus 110 ~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~ 189 (525)
...+..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++++|+++|++++..
T Consensus 70 ----------~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~ 138 (240)
T 3eu9_A 70 ----------QLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPS-LIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMM 138 (240)
T ss_dssp ----------CCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred ----------hhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCCc-ccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCcccc
Confidence 2345569999999999999999999999999876 67889999999999999999999999999999999
Q ss_pred CCCCCcHHHHHHHcCC-HHHHHHHHHhcCcCcccCCC-CCCcHHHHHHHcCChhHHHHHhhcCCCcchhcccCCCCcHHH
Q 009805 190 GPNGKTALHAAVNSYA-ADVVEKLLAKKRHLTRERDD-CGWTPLHHSAYLGLKDITALLLEFDGSSALILDKDRKMTALL 267 (525)
Q Consensus 190 ~~~g~t~L~~A~~~~~-~~~~~~Ll~~~~~~~~~~d~-~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpL~ 267 (525)
+..|.||||+|+..++ .+++++|++.+.+. +..+. .|.||||+|+..|+.+++++|+++|.+. ...+. .|.|||+
T Consensus 139 ~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~-~g~t~l~ 215 (240)
T 3eu9_A 139 DQNGMTPLMWAAYRTHSVDPTRLLLTFNVSV-NLGDKYHKNTALHWAVLAGNTTVISLLLEAGANV-DAQNI-KGESALD 215 (240)
T ss_dssp CTTSCCHHHHHHHHCCSSTTHHHHHHTTCCT-TCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCT-TCBCT-TSCBHHH
T ss_pred CCCCCcHHHHHHHhCChHHHHHHHHhcCCCc-chhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCC-CCCCHHH
Confidence 9999999999996665 89999999999884 55554 8999999999999999999999999887 44555 7999999
Q ss_pred HHHhcCCHHHHHHHHhhCCC
Q 009805 268 MAASQGHESLAGTIIAHYPE 287 (525)
Q Consensus 268 ~A~~~g~~~~v~~Ll~~~~~ 287 (525)
+|+..|+.+++++|++.+++
T Consensus 216 ~A~~~~~~~~v~~L~~~~~~ 235 (240)
T 3eu9_A 216 LAKQRKNVWMINHLQEARQA 235 (240)
T ss_dssp HHHHTTCHHHHHHHHHHC--
T ss_pred HHHHcCcHHHHHHHHHhhhc
Confidence 99999999999999999876
No 40
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=1.2e-35 Score=288.40 Aligned_cols=258 Identities=14% Similarity=0.080 Sum_probs=203.4
Q ss_pred HcCCcchhhhhhhhccccccccCCCCchhhhhhhcccccccCCchhhHHHHHHHHHhCCc--cccc-----------cCC
Q 009805 10 TNGEIEPFNGIAKDNLRSIVTHNNKHTVLHVNIARQSLKNKEGESVSTKFVEQILEICPS--LLIQ-----------TNA 76 (525)
Q Consensus 10 ~~g~~~~v~~ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~g~~~~~~~ll~~~~~~~~--~l~~-----------~~~ 76 (525)
.....+++++|+++|++.+..+..|.++++ |+.++++.|++..-.... .... ...
T Consensus 28 ~~~~~dlv~~ll~~ga~i~~~~~~g~~~~~------------g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~ 95 (327)
T 1sw6_A 28 ITFTHDLTSDFLSSPLKIMKALPSPVVNDN------------EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGS 95 (327)
T ss_dssp EECCTTCCCSTTTSSCCCEECBCCCCCCCH------------HHHHHHHHHHHHHHC-----------------------
T ss_pred hhhcCchHHHHhhCCcccccCCCCCCcccC------------chhHHHHHHHHhccCCccccchHhhhcccccccccccC
Confidence 345667899999999999989989999987 899999999875211111 0000 111
Q ss_pred CCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcC-ccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCC
Q 009805 77 KGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGL-TNEEENTALHEAVQCGNLDAVKILMEAGPNFPYS 155 (525)
Q Consensus 77 ~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~-~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~ 155 (525)
...+.+|.|+..+..++++.|++.+.+ ++. +|..|.||||+|+..|+.++|++|+++|++++ .
T Consensus 96 ~~~~~~~~a~~~~~~~~~~~l~~~g~d---------------vn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n-~ 159 (327)
T 1sw6_A 96 SNQQQQHVSFDSLLQEVNDAFPNTQLN---------------LNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRL-Y 159 (327)
T ss_dssp --------CHHHHHHHHHHHCTTSCCC---------------SCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-B
T ss_pred CccchhHHHHHhhHHHHHHHHHhcCCC---------------cccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-C
Confidence 122345888888888999999998887 667 79999999999999999999999999999987 7
Q ss_pred CCCCCchHHHHHHHcCC---HHHHHHHHHhc-CCCCCCCCCCCcHHHHHHH----cCCHHHHHHHHHh------------
Q 009805 156 ANVNGETPLYMAAARGS---KKMVAEILEKC-SSAAHDGPNGKTALHAAVN----SYAADVVEKLLAK------------ 215 (525)
Q Consensus 156 ~~~~g~tpL~~A~~~g~---~~~v~~Ll~~~-~~~~~~~~~g~t~L~~A~~----~~~~~~~~~Ll~~------------ 215 (525)
.+..|+||||+|+..|+ .++++.|++.+ ++++.+|..|.||||+|+. .|+.+++++|++.
T Consensus 160 ~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~ 239 (327)
T 1sw6_A 160 GDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRP 239 (327)
T ss_dssp CCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCC
T ss_pred cCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchH
Confidence 88899999999999998 78888999887 7789999999999999999 8999999999987
Q ss_pred --------cCcCcccCCCCCCcHHHHHHHcCChhHHHHHhhcCCCcchhcccCCCCcHHHHHHhcCCHHHHHHHHhhCCC
Q 009805 216 --------KRHLTRERDDCGWTPLHHSAYLGLKDITALLLEFDGSSALILDKDRKMTALLMAASQGHESLAGTIIAHYPE 287 (525)
Q Consensus 216 --------~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ 287 (525)
+.+ ++.++..|.||||+|+. +++|++++. +..+. .|+||||+|+..|+.+++++|++++++
T Consensus 240 i~~~~~~~g~~-~~~~~~~g~t~L~~a~~------~~~Ll~~~~---n~~d~-~G~TpLh~A~~~g~~~~v~~Ll~~Gad 308 (327)
T 1sw6_A 240 IQSGTNEKESK-PNDKNGERKDSILENLD------LKWIIANML---NAQDS-NGDTCLNIAARLGNISIVDALLDYGAD 308 (327)
T ss_dssp EEEC-----------------CHHHHHCS------HHHHHHHTT---TCCCT-TSCCHHHHHHHHCCHHHHHHHHHTTCC
T ss_pred HHhhhhcccCC-cccccccCCChhHHHHH------HHHHHHhCC---CCCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 445 67889999999999985 899999853 44454 799999999999999999999999999
Q ss_pred ccccccCCCCchhHHHHhcC
Q 009805 288 CYDLVDNGGWNVLHFLMVSL 307 (525)
Q Consensus 288 ~~~~~d~~g~t~Lh~A~~~~ 307 (525)
++.+|..|+||||+|++.|
T Consensus 309 -~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 309 -PFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp -TTCCCTTSCCGGGGTCC--
T ss_pred -CcccCCCCCCHHHHHHhcC
Confidence 7899999999999998764
No 41
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=4e-35 Score=271.49 Aligned_cols=199 Identities=25% Similarity=0.258 Sum_probs=101.8
Q ss_pred cCCCCchhhhhhhcccccccCCchhhHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhh
Q 009805 31 HNNKHTVLHVNIARQSLKNKEGESVSTKFVEQILEICPSLLIQTNAKGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKC 110 (525)
Q Consensus 31 ~~~g~t~Lh~A~~~~~~~~~~g~~~~~~~ll~~~~~~~~~l~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~ 110 (525)
|.+|.||||+|+.. |+.+++++|++.....+.+++.+|..|.||||+|+..|+.+++++|++.+++
T Consensus 5 d~~g~t~L~~A~~~-------g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------- 70 (236)
T 1ikn_D 5 TEDGDSFLHLAIIH-------EEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCD------- 70 (236)
T ss_dssp --CCCCTTHHHHHT-------TCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCC-------
T ss_pred CCCCCchhHHHHHc-------CChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-------
Confidence 33555555555555 5555555554432222334455555555555555555555555555555544
Q ss_pred hhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCC-----CCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCC
Q 009805 111 CAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPNF-----PYSANVNGETPLYMAAARGSKKMVAEILEKCSS 185 (525)
Q Consensus 111 ~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~-----~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ 185 (525)
++.+|..|.||||+|+..|+.+++++|++.+++. ....+..|.||||+|+..|+.+++++|+++|++
T Consensus 71 --------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 142 (236)
T 1ikn_D 71 --------PELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGAD 142 (236)
T ss_dssp --------SCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred --------CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 3345555555555555555555555555555431 123344455555555555555555555555555
Q ss_pred CCCCCC-CCCcHHHHHHHcCCHHHHHHHHHhcCcCcccCCCCCCcHHHHHHHcCChhHHHHHhhcCCC
Q 009805 186 AAHDGP-NGKTALHAAVNSYAADVVEKLLAKKRHLTRERDDCGWTPLHHSAYLGLKDITALLLEFDGS 252 (525)
Q Consensus 186 ~~~~~~-~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ 252 (525)
++.++. .|.||||+|+..++.+++++|++.+++ ++.+|..|.||||+|+..|+.+++++|+++|++
T Consensus 143 ~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~ 209 (236)
T 1ikn_D 143 VNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGAD-VNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLE 209 (236)
T ss_dssp TTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCC-SCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCG
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcccCCCCCHHHHHHccCchHHHHHHHHcchh
Confidence 555544 555555555555555555555555544 344444455555555555555555555544443
No 42
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=1.1e-33 Score=261.12 Aligned_cols=194 Identities=26% Similarity=0.334 Sum_probs=145.3
Q ss_pred CCCcHHHHHHHcCChhHHHHHHHh-hhcCChhHhhhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCC--
Q 009805 77 KGDSPLHAAAKCGRPAVVKVLIEF-AKKQPTAMKCCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFP-- 153 (525)
Q Consensus 77 ~g~tpLh~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~-- 153 (525)
.|+||||.|++.|+.+++++|++. +.+ ++.+|..|.||||+|+..|+.+++++|+++|+++.
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~---------------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~ 66 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCE---------------VHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFE 66 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSC---------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCC---------------cccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccc
Confidence 588999999999999999999997 665 66789999999999999999999999999988753
Q ss_pred --CCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCC-------------CCCcHHHHHHHcCCHHHHHHHHHhcCc
Q 009805 154 --YSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGP-------------NGKTALHAAVNSYAADVVEKLLAKKRH 218 (525)
Q Consensus 154 --~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~-------------~g~t~L~~A~~~~~~~~~~~Ll~~~~~ 218 (525)
...+..|.||||+|+..|+.+++++|+++|++++..+. .|.||||+|+..|+.+++++|++++++
T Consensus 67 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 146 (232)
T 2rfa_A 67 PMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGAD 146 (232)
T ss_dssp CCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred cccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 24567899999999999999999999999999887665 566666666666666666666666665
Q ss_pred CcccCCCCCCcHHHHHHHcCChhHH----HHHhhcCCCcc-----hhcccCCCCcHHHHHHhcCCHHHHHHHHhhCCC
Q 009805 219 LTRERDDCGWTPLHHSAYLGLKDIT----ALLLEFDGSSA-----LILDKDRKMTALLMAASQGHESLAGTIIAHYPE 287 (525)
Q Consensus 219 ~~~~~d~~g~tpL~~A~~~g~~~~v----~~Ll~~~~~~~-----~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ 287 (525)
++.+|..|+||||+|+..|+.+++ ++|++++++.. +..+. .|.||||+|+..|+.+++++|+++++.
T Consensus 147 -~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~-~g~tpl~~A~~~g~~~~v~~Ll~~g~~ 222 (232)
T 2rfa_A 147 -IRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNN-QGLTPFKLAGVEGNIVMFQHLMQKRKH 222 (232)
T ss_dssp -TTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCT-TSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred -CCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCC-CCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence 455666666666666666666655 66666665442 22233 556666666666666666666665544
No 43
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=1.9e-33 Score=259.50 Aligned_cols=201 Identities=22% Similarity=0.199 Sum_probs=180.2
Q ss_pred CCCchhhhhhhcccccccCCchhhHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhh
Q 009805 33 NKHTVLHVNIARQSLKNKEGESVSTKFVEQILEICPSLLIQTNAKGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCA 112 (525)
Q Consensus 33 ~g~t~Lh~A~~~~~~~~~~g~~~~~~~ll~~~~~~~~~l~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~ 112 (525)
.|.||||+|+.. |+.+++++|++ ..+.+++.+|..|.||||+|+..|+.+++++|++.+++...
T Consensus 2 ~g~t~L~~A~~~-------g~~~~v~~Ll~---~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~------ 65 (232)
T 2rfa_A 2 IWESPLLLAAKE-------NDVQALSKLLK---FEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVF------ 65 (232)
T ss_dssp CTTCHHHHHHHT-------TCHHHHHHHHT---TTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGG------
T ss_pred CCCCHHHHHHHc-------CCHHHHHHHHH---hcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhcc------
Confidence 589999999999 99999999954 45778899999999999999999999999999999876311
Q ss_pred hhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCC------------CCCCchHHHHHHHcCCHHHHHHHH
Q 009805 113 KTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFPYSA------------NVNGETPLYMAAARGSKKMVAEIL 180 (525)
Q Consensus 113 ~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~------------~~~g~tpL~~A~~~g~~~~v~~Ll 180 (525)
...+.+|..|.||||+|+..|+.+++++|+++|++++... +..|.||||+|+..|+.+++++|+
T Consensus 66 ----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 141 (232)
T 2rfa_A 66 ----EPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLI 141 (232)
T ss_dssp ----CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHH
T ss_pred ----ccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHH
Confidence 0125578899999999999999999999999999977432 237999999999999999999999
Q ss_pred HhcCCCCCCCCCCCcHHHHHHHcCCHHHH----HHHHHhcCcCc-----ccCCCCCCcHHHHHHHcCChhHHHHHhhcCC
Q 009805 181 EKCSSAAHDGPNGKTALHAAVNSYAADVV----EKLLAKKRHLT-----RERDDCGWTPLHHSAYLGLKDITALLLEFDG 251 (525)
Q Consensus 181 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~~----~~Ll~~~~~~~-----~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~ 251 (525)
++|++++.+|..|.||||+|+..++.+++ ++|++.+++.. +.+|..|+||||+|+..|+.+++++|++++.
T Consensus 142 ~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~ 221 (232)
T 2rfa_A 142 EHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRK 221 (232)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCc
Confidence 99999999999999999999999999988 99999998743 6889999999999999999999999999887
Q ss_pred Cc
Q 009805 252 SS 253 (525)
Q Consensus 252 ~~ 253 (525)
..
T Consensus 222 ~~ 223 (232)
T 2rfa_A 222 HI 223 (232)
T ss_dssp HC
T ss_pred cc
Confidence 55
No 44
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=6.7e-35 Score=269.99 Aligned_cols=215 Identities=22% Similarity=0.241 Sum_probs=122.4
Q ss_pred ccCCCCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCC
Q 009805 73 QTNAKGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPNF 152 (525)
Q Consensus 73 ~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~ 152 (525)
.+|.+|.||||+|+..|+.+++++|++.+..... .++.+|..|.||||+|+..|+.+++++|+++|+++
T Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~-----------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 71 (236)
T 1ikn_D 3 QLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLA-----------FLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDP 71 (236)
T ss_dssp ----CCCCTTHHHHHTTCSSSSSCCCC-----CC-----------CCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCS
T ss_pred cCCCCCCchhHHHHHcCChhHHHHHHHHhhccHH-----------HhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 3566777777777777777777777776543110 14556677777777777777777777777777766
Q ss_pred CCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCC------CCCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCcccCCC-
Q 009805 153 PYSANVNGETPLYMAAARGSKKMVAEILEKCSSA------AHDGPNGKTALHAAVNSYAADVVEKLLAKKRHLTRERDD- 225 (525)
Q Consensus 153 ~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~------~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~- 225 (525)
+ ..+..|.||||+|+..|+.+++++|+++++++ +..+..|.||||+|+..|+.+++++|++.+++ ++.++.
T Consensus 72 ~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~ 149 (236)
T 1ikn_D 72 E-LRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGAD-VNAQEPC 149 (236)
T ss_dssp C-CCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTT
T ss_pred C-CcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCC
Confidence 5 55667777777777777777777777776542 33445555666666665556666666555555 334443
Q ss_pred CCCcHHHHHHHcCChhHHHHHhhcCCCcchhcccCCCCcHHHHHHhcCCHHHHHHHHhhCCCcc-ccccCCCCchhHH
Q 009805 226 CGWTPLHHSAYLGLKDITALLLEFDGSSALILDKDRKMTALLMAASQGHESLAGTIIAHYPECY-DLVDNGGWNVLHF 302 (525)
Q Consensus 226 ~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~-~~~d~~g~t~Lh~ 302 (525)
.|.||||+|+..|+.+++++|+++|++. ...+. .|.||||+|+.+|+.+++++|++++++.. ...+..|.|+.+.
T Consensus 150 ~g~tpL~~A~~~~~~~~v~~Ll~~ga~~-~~~~~-~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~ 225 (236)
T 1ikn_D 150 NGRTALHLAVDLQNPDLVSLLLKCGADV-NRVTY-QGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDT 225 (236)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHTTTCCS-CCCCT-TCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTTCCCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcccC-CCCCHHHHHHccCchHHHHHHHHcchhhhhcCCccchHHHHhh
Confidence 5555555555555555555555555544 22222 45555555555555555555555554422 2344444444443
No 45
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=2.5e-33 Score=265.44 Aligned_cols=214 Identities=22% Similarity=0.263 Sum_probs=171.2
Q ss_pred cccccccCCCCchhhhhhhcccccccCCchhhHHHHHHHHHhCCcccc----ccCCCCCcHHHHHHHc---CChhHHHHH
Q 009805 25 LRSIVTHNNKHTVLHVNIARQSLKNKEGESVSTKFVEQILEICPSLLI----QTNAKGDSPLHAAAKC---GRPAVVKVL 97 (525)
Q Consensus 25 ~~~~~~~~~g~t~Lh~A~~~~~~~~~~g~~~~~~~ll~~~~~~~~~l~----~~~~~g~tpLh~A~~~---g~~~~v~~L 97 (525)
...+..+..|.||||+|++. |+.++++.|++.....+..+. ..|..|.||||+|+.. |+.++|++|
T Consensus 4 a~~~~~d~~g~t~L~~A~~~-------g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~L 76 (273)
T 2pnn_A 4 AGEKPPRLYDRRSIFDAVAQ-------SNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALL 76 (273)
T ss_dssp -------CCCHHHHHHHHHT-------TCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHH
T ss_pred ccCCCCCcccchHHHHHHHc-------CCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHH
Confidence 34445677999999999999 999999999886555555444 4688999999999987 999999999
Q ss_pred HHhhhcCChhHhhhhhhhHHHhcC----ccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCCC-------------CCC
Q 009805 98 IEFAKKQPTAMKCCAKTAWQMLGL----TNEEENTALHEAVQCGNLDAVKILMEAGPNFPYSAN-------------VNG 160 (525)
Q Consensus 98 l~~~~~~~~~~~~~~~~~~~~l~~----~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~-------------~~g 160 (525)
++.+++.... ..+++. .|..|.||||+|+..|+.+++++|+++|++++.... ..|
T Consensus 77 l~~ga~~~~~--------~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g 148 (273)
T 2pnn_A 77 LDVARKTDSL--------KQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFG 148 (273)
T ss_dssp HHHHHHTTCH--------HHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSC
T ss_pred HHhhccccch--------hHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCC
Confidence 9999763221 111232 567899999999999999999999999999874332 279
Q ss_pred chHHHHHHHcCCHHHHHHHHH---hcCCCCCCCCCCCcHHHHHHHcCC---------HHHHHHHHHhcCcCc------cc
Q 009805 161 ETPLYMAAARGSKKMVAEILE---KCSSAAHDGPNGKTALHAAVNSYA---------ADVVEKLLAKKRHLT------RE 222 (525)
Q Consensus 161 ~tpL~~A~~~g~~~~v~~Ll~---~~~~~~~~~~~g~t~L~~A~~~~~---------~~~~~~Ll~~~~~~~------~~ 222 (525)
.||||+|+..|+.+++++|++ +|++++.+|..|.||||+|+..++ .+++++|++.+++.. +.
T Consensus 149 ~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~ 228 (273)
T 2pnn_A 149 ELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEI 228 (273)
T ss_dssp BSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGC
T ss_pred CCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccc
Confidence 999999999999999999999 889999999999999999999887 788899998888743 24
Q ss_pred CCCCCCcHHHHHHHcCChhHHHHHhhcCCCc
Q 009805 223 RDDCGWTPLHHSAYLGLKDITALLLEFDGSS 253 (525)
Q Consensus 223 ~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~ 253 (525)
+|..|+||||+|+..|+.+++++|+++|+..
T Consensus 229 ~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~d 259 (273)
T 2pnn_A 229 TNRKGLTPLALAASSGKIGVLAYILQREIHE 259 (273)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHHHTC-
T ss_pred cCCCCCCHHHHHHHhChHHHHHHHHHCCCCC
Confidence 7788888888888888888888888888743
No 46
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=2.3e-32 Score=246.23 Aligned_cols=191 Identities=19% Similarity=0.237 Sum_probs=102.4
Q ss_pred CCCchhhhhhhcccccccCCchhhHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhh
Q 009805 33 NKHTVLHVNIARQSLKNKEGESVSTKFVEQILEICPSLLIQTNAKGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCA 112 (525)
Q Consensus 33 ~g~t~Lh~A~~~~~~~~~~g~~~~~~~ll~~~~~~~~~l~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~ 112 (525)
.+.||||.|+.. |+.+.++.++ ...+.+++..|..|.||||+|+..|+.+++++|++.+++
T Consensus 4 ~~~~~L~~A~~~-------g~~~~v~~ll---~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~--------- 64 (201)
T 3hra_A 4 YEVGALLEAANQ-------RDTKKVKEIL---QDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGAD--------- 64 (201)
T ss_dssp CCTTHHHHHHHT-------TCHHHHHHHH---TCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC---------
T ss_pred ccccHHHHHHHh-------ccHHHHHHHH---HcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---------
Confidence 445555555555 5555555552 233334555555555555555555555555555555554
Q ss_pred hhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHhc-CCCCCCCC
Q 009805 113 KTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFPYSANVNGETPLYMAAARGSKKMVAEILEKC-SSAAHDGP 191 (525)
Q Consensus 113 ~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~-~~~~~~~~ 191 (525)
++.+|..|.||||+|+..|+.+++++|++.+.......+..|.||||+|+..|+.+++++|+++| ++++.++.
T Consensus 65 ------~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 138 (201)
T 3hra_A 65 ------INLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQND 138 (201)
T ss_dssp ------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCT
T ss_pred ------CCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCC
Confidence 33455555555555555555555555553322112244555555555555555555555555555 55555555
Q ss_pred CCCcHHHHHHHcCC-----HHHHHHHHHhcCcCcccCCCCCCcHHHHHHHcCChhHHHHHhhc
Q 009805 192 NGKTALHAAVNSYA-----ADVVEKLLAKKRHLTRERDDCGWTPLHHSAYLGLKDITALLLEF 249 (525)
Q Consensus 192 ~g~t~L~~A~~~~~-----~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ 249 (525)
.|.||||+|+..++ .+++++|++.+++ ++.+|..|.||||+|+..|+.+++++|+++
T Consensus 139 ~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 200 (201)
T 3hra_A 139 FGYTALIEAVGLREGNQLYQDIVKLLMENGAD-QSIKDNSGRTAMDYANQKGYTEISKILAQY 200 (201)
T ss_dssp TSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHTC
T ss_pred CCCCHHHHHHHhccchhhHHHHHHHHHHCCCC-CCccCCCCCCHHHHHHHcCCHhHHHHHHhc
Confidence 55555555555554 5555555555555 344555555555555555555555555544
No 47
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=4.9e-33 Score=260.77 Aligned_cols=209 Identities=24% Similarity=0.249 Sum_probs=173.7
Q ss_pred CCCchhhhhhhcccccccCCchhhHHHHHHHHHhCCccccc----cCCCCCcHHHHHHHc---CChhHHHHHHHhhhcCC
Q 009805 33 NKHTVLHVNIARQSLKNKEGESVSTKFVEQILEICPSLLIQ----TNAKGDSPLHAAAKC---GRPAVVKVLIEFAKKQP 105 (525)
Q Consensus 33 ~g~t~Lh~A~~~~~~~~~~g~~~~~~~ll~~~~~~~~~l~~----~~~~g~tpLh~A~~~---g~~~~v~~Ll~~~~~~~ 105 (525)
.|.||||.|+.. |+.+.++.|++.+...+.+++. .|..|.||||+|+.. |+.+++++|++.+++..
T Consensus 1 ~G~t~L~~A~~~-------g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~ 73 (256)
T 2etb_A 1 FDRDRLFSVVSR-------GVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSG 73 (256)
T ss_dssp CCHHHHHHHHHH-------TCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTT
T ss_pred CCccHHHHHHHc-------CCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCccc
Confidence 378999999999 9999777776655555777777 899999999999999 99999999999998742
Q ss_pred hhHhhhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCCCCC-------------CchHHHHHHHcCC
Q 009805 106 TAMKCCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFPYSANVN-------------GETPLYMAAARGS 172 (525)
Q Consensus 106 ~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~-------------g~tpL~~A~~~g~ 172 (525)
.... ........+|..|.||||+|+..|+.+++++|+++|++++ ..+.. |.||||+|+..|+
T Consensus 74 ~~~~----~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~ 148 (256)
T 2etb_A 74 NPKP----LVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVH-LRACGRFFQKHQGTCFYFGELPLSLAACTKQ 148 (256)
T ss_dssp CSSC----GGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCCSGGGSCCSSSCCCSCSSHHHHHHHTTC
T ss_pred chhh----hcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCC-cccccccccccccccccCCCCHHHHHHHcCC
Confidence 1000 0000011245789999999999999999999999999987 44443 9999999999999
Q ss_pred HHHHHHHHH---hcCCCCCCCCCCCcHHHHHHH--cCCHH-------HHHHHHHhcCcCc------ccCCCCCCcHHHHH
Q 009805 173 KKMVAEILE---KCSSAAHDGPNGKTALHAAVN--SYAAD-------VVEKLLAKKRHLT------RERDDCGWTPLHHS 234 (525)
Q Consensus 173 ~~~v~~Ll~---~~~~~~~~~~~g~t~L~~A~~--~~~~~-------~~~~Ll~~~~~~~------~~~d~~g~tpL~~A 234 (525)
.+++++|++ +|++++.+|..|.||||+|+. .++.+ ++++|++.+++.. +.+|..|+||||+|
T Consensus 149 ~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A 228 (256)
T 2etb_A 149 WDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLA 228 (256)
T ss_dssp HHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHH
T ss_pred HHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHH
Confidence 999999999 899999999999999999998 78888 9999999988842 77888899999999
Q ss_pred HHcCChhHHHHHhhcCCCc
Q 009805 235 AYLGLKDITALLLEFDGSS 253 (525)
Q Consensus 235 ~~~g~~~~v~~Ll~~~~~~ 253 (525)
+..|+.+++++|+++|...
T Consensus 229 ~~~g~~~~v~~Ll~~g~~~ 247 (256)
T 2etb_A 229 AKEGKIEIFRHILQREFSG 247 (256)
T ss_dssp HHTTCHHHHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHhCCCCC
Confidence 9999999999999887654
No 48
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=6.3e-32 Score=243.41 Aligned_cols=193 Identities=17% Similarity=0.167 Sum_probs=174.3
Q ss_pred cCCCChHhHHHHHcCCHHHHHHHHhcCC-CCCCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHH
Q 009805 123 NEEENTALHEAVQCGNLDAVKILMEAGP-NFPYSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAV 201 (525)
Q Consensus 123 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~ 201 (525)
+..+.||||.|+..|+.+.++.|++.++ +++ ..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~ 80 (201)
T 3hra_A 2 KTYEVGALLEAANQRDTKKVKEILQDTTYQVD-EVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAG 80 (201)
T ss_dssp -CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CcccccHHHHHHHhccHHHHHHHHHcCCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Confidence 3568899999999999999999999987 544 77889999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHhcCcCcccCCCCCCcHHHHHHHcCChhHHHHHhhcCCCcchhcccCCCCcHHHHHHhcCC-----HH
Q 009805 202 NSYAADVVEKLLAKKRHLTRERDDCGWTPLHHSAYLGLKDITALLLEFDGSSALILDKDRKMTALLMAASQGH-----ES 276 (525)
Q Consensus 202 ~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpL~~A~~~g~-----~~ 276 (525)
..++.+++++|++.+....+..|..|.||||+|+..|+.+++++|++++.......+. .|.||||+|+..++ .+
T Consensus 81 ~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-~g~t~L~~A~~~~~~~~~~~~ 159 (201)
T 3hra_A 81 AQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQND-FGYTALIEAVGLREGNQLYQD 159 (201)
T ss_dssp HTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCT-TSCCHHHHHHHSSCCSHHHHH
T ss_pred HcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCC-CCCCHHHHHHHhccchhhHHH
Confidence 9999999999997766557889999999999999999999999999998444355555 79999999999888 89
Q ss_pred HHHHHHhhCCCccccccCCCCchhHHHHhcCCHHHHHHHhhC
Q 009805 277 LAGTIIAHYPECYDLVDNGGWNVLHFLMVSLHESKLKRLLKD 318 (525)
Q Consensus 277 ~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~ll~~ 318 (525)
++++|++++++ ++.+|..|+||||+|+..++.++++.|++.
T Consensus 160 ~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 200 (201)
T 3hra_A 160 IVKLLMENGAD-QSIKDNSGRTAMDYANQKGYTEISKILAQY 200 (201)
T ss_dssp HHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHTC
T ss_pred HHHHHHHCCCC-CCccCCCCCCHHHHHHHcCCHhHHHHHHhc
Confidence 99999999988 688999999999999999999999999874
No 49
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=3.3e-33 Score=264.55 Aligned_cols=220 Identities=17% Similarity=0.185 Sum_probs=163.0
Q ss_pred ccccCCCCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcCccCCCChHhHHHHHc---CCHHHHHHHHh
Q 009805 71 LIQTNAKGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLTNEEENTALHEAVQC---GNLDAVKILME 147 (525)
Q Consensus 71 l~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~---g~~~~v~~Ll~ 147 (525)
....|..|.||||.|++.|+.++|+.|++.+.+...... ......|..|.||||+|+.. |+.+++++|++
T Consensus 6 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~-------~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~ 78 (273)
T 2pnn_A 6 EKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLT-------DSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLD 78 (273)
T ss_dssp -----CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTT-------SGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHH
T ss_pred CCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccC-------CcccccCcCCCCHHHHHHHHHhcCChHHHHHHHH
Confidence 345788999999999999999999999997654322110 00114588999999999987 99999999999
Q ss_pred cCCCCC----------CCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCC--------------CCCcHHHHHHHc
Q 009805 148 AGPNFP----------YSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGP--------------NGKTALHAAVNS 203 (525)
Q Consensus 148 ~~~~~~----------~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~--------------~g~t~L~~A~~~ 203 (525)
+|++.. ...|..|.||||+|+..|+.+++++|+++|++++..+. .|.||||+|+..
T Consensus 79 ~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~ 158 (273)
T 2pnn_A 79 VARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACT 158 (273)
T ss_dssp HHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHT
T ss_pred hhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHc
Confidence 986421 12466899999999999999999999999999998886 688888888888
Q ss_pred CCHHHHHHHHH---hcCcCcccCCCCCCcHHHHHHHcCC---------hhHHHHHhhcCCCcch------hcccCCCCcH
Q 009805 204 YAADVVEKLLA---KKRHLTRERDDCGWTPLHHSAYLGL---------KDITALLLEFDGSSAL------ILDKDRKMTA 265 (525)
Q Consensus 204 ~~~~~~~~Ll~---~~~~~~~~~d~~g~tpL~~A~~~g~---------~~~v~~Ll~~~~~~~~------~~~~~~g~tp 265 (525)
|+.+++++|++ .+.+ ++.+|..|+||||+|+..|+ .+++++|+++|++... ..+. .|.||
T Consensus 159 g~~~~v~~Ll~~~~~gad-~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~-~g~Tp 236 (273)
T 2pnn_A 159 NQLAIVKFLLQNSWQPAD-ISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNR-KGLTP 236 (273)
T ss_dssp TCHHHHHHHHHCSSCCCC-TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCT-TSCCH
T ss_pred CCHHHHHHHHhcccCCCC-ceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCC-CCCCH
Confidence 88888888888 6776 57788888888888888877 6788888887776532 2343 67788
Q ss_pred HHHHHhcCCHHHHHHHHhhCCCccccccCCCCch
Q 009805 266 LLMAASQGHESLAGTIIAHYPECYDLVDNGGWNV 299 (525)
Q Consensus 266 L~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~ 299 (525)
||+|+..|+.+++++|+++++.........+++|
T Consensus 237 L~~A~~~g~~~iv~~Ll~~ga~dp~~~~~~~~~~ 270 (273)
T 2pnn_A 237 LALAASSGKIGVLAYILQREIHEPECRHAAAHHH 270 (273)
T ss_dssp HHHHHHTTCHHHHHHHHHHHTC------------
T ss_pred HHHHHHhChHHHHHHHHHCCCCCchhhhhhhhhc
Confidence 8888888888888888888774355555555544
No 50
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=9.9e-33 Score=258.72 Aligned_cols=194 Identities=21% Similarity=0.182 Sum_probs=150.5
Q ss_pred CCCcHHHHHHHcCChh----HHHHHHHhhhcCChhHhhhhhhhHHHhcC----ccCCCChHhHHHHHc---CCHHHHHHH
Q 009805 77 KGDSPLHAAAKCGRPA----VVKVLIEFAKKQPTAMKCCAKTAWQMLGL----TNEEENTALHEAVQC---GNLDAVKIL 145 (525)
Q Consensus 77 ~g~tpLh~A~~~g~~~----~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~----~~~~g~t~Lh~A~~~---g~~~~v~~L 145 (525)
.|+||||.|++.|+.+ ++++|++.+.+ ++. +|..|.||||+|+.. |+.+++++|
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~---------------i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~L 65 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKY---------------LTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPL 65 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCC---------------TTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHH
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCC---------------cccccccCCCCCCCHHHHHHHccccchHHHHHHH
Confidence 3789999999999997 55666667776 444 799999999999999 999999999
Q ss_pred HhcCCCCCCC----------CCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCC-------------CCcHHHHHHH
Q 009805 146 MEAGPNFPYS----------ANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPN-------------GKTALHAAVN 202 (525)
Q Consensus 146 l~~~~~~~~~----------~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~-------------g~t~L~~A~~ 202 (525)
++.|++.... .|..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+.
T Consensus 66 l~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~ 145 (256)
T 2etb_A 66 LQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAAC 145 (256)
T ss_dssp HHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHH
T ss_pred HhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHH
Confidence 9998775422 2467999999999999999999999999999988876 7778888877
Q ss_pred cCCHHHHHHHHH---hcCcCcccCCCCCCcHHHHHHH--cCChh-------HHHHHhhcCCCcc------hhcccCCCCc
Q 009805 203 SYAADVVEKLLA---KKRHLTRERDDCGWTPLHHSAY--LGLKD-------ITALLLEFDGSSA------LILDKDRKMT 264 (525)
Q Consensus 203 ~~~~~~~~~Ll~---~~~~~~~~~d~~g~tpL~~A~~--~g~~~-------~v~~Ll~~~~~~~------~~~~~~~g~t 264 (525)
.|+.+++++|++ .+.+ ++.+|..|+||||+|+. .++.+ ++++|+++|++.. ...+. .|.|
T Consensus 146 ~~~~~~v~~Ll~~~~~ga~-~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~-~g~t 223 (256)
T 2etb_A 146 TKQWDVVTYLLENPHQPAS-LEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNH-QGLT 223 (256)
T ss_dssp TTCHHHHHHHHHCSSCCCC-TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCT-TSCC
T ss_pred cCCHHHHHHHHhccccCCC-cCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCC-CCCC
Confidence 777788888777 6666 56777777777777777 55666 7777777666542 22333 5666
Q ss_pred HHHHHHhcCCHHHHHHHHhhCCC
Q 009805 265 ALLMAASQGHESLAGTIIAHYPE 287 (525)
Q Consensus 265 pL~~A~~~g~~~~v~~Ll~~~~~ 287 (525)
|||+|+..|+.+++++|++++++
T Consensus 224 pL~~A~~~g~~~~v~~Ll~~g~~ 246 (256)
T 2etb_A 224 PLKLAAKEGKIEIFRHILQREFS 246 (256)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHhCCCC
Confidence 66666666666666666666544
No 51
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.98 E-value=1.4e-31 Score=232.66 Aligned_cols=157 Identities=29% Similarity=0.419 Sum_probs=119.1
Q ss_pred cHHHHHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCCCCC
Q 009805 80 SPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFPYSANVN 159 (525)
Q Consensus 80 tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~ 159 (525)
++|+.||+.|+.++|+.|++.|++ ++.+|.+|.||||+|+..++.+++++|+++|++++ ..|..
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gad---------------vn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~-~~d~~ 69 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGAD---------------VNASDSDGRTPLHHAAENGHKEVVKLLISKGADVN-AKDSD 69 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCC---------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTT
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCC---------------CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchh-hhccC
Confidence 367778888888888888877776 56677778888888888888888888888777765 56777
Q ss_pred CchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCcccCCCCCCcHHHHHHHcCC
Q 009805 160 GETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAVNSYAADVVEKLLAKKRHLTRERDDCGWTPLHHSAYLGL 239 (525)
Q Consensus 160 g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~ 239 (525)
|+||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+..|+.+++++|++.+++ ++.+|..|+||||+|+..|+
T Consensus 70 g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad-~~~~d~~G~TpL~~A~~~g~ 148 (169)
T 4gpm_A 70 GRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGAD-VNTSDSDGRTPLDLAREHGN 148 (169)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCC
Confidence 78888888888888888888888877777777788888888888888888888877777 56777777777777777777
Q ss_pred hhHHHHHhhcCCCc
Q 009805 240 KDITALLLEFDGSS 253 (525)
Q Consensus 240 ~~~v~~Ll~~~~~~ 253 (525)
.+++++|+++|++.
T Consensus 149 ~~iv~~Ll~~GA~i 162 (169)
T 4gpm_A 149 EEVVKLLEKQGGWL 162 (169)
T ss_dssp HHHHHHHHTC----
T ss_pred HHHHHHHHHCCCCc
Confidence 77777777777765
No 52
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.98 E-value=4.8e-32 Score=235.63 Aligned_cols=147 Identities=27% Similarity=0.407 Sum_probs=69.6
Q ss_pred CchhhHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcCccCCCChHhH
Q 009805 52 GESVSTKFVEQILEICPSLLIQTNAKGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLTNEEENTALH 131 (525)
Q Consensus 52 g~~~~~~~ll~~~~~~~~~l~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh 131 (525)
|+.++|++|++ .+.+++.+|.+|.||||+|+..++.+++++|++.+++ ++.+|.+|.||||
T Consensus 15 G~~~~v~~Ll~----~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad---------------~~~~d~~g~TpLh 75 (169)
T 4gpm_A 15 GNKDRVKDLIE----NGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGAD---------------VNAKDSDGRTPLH 75 (169)
T ss_dssp TCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---------------TTCCCTTSCCHHH
T ss_pred CCHHHHHHHHH----CCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccc---------------hhhhccCCCCHHH
Confidence 44444444433 1334444444444444444444444444444444444 3344444455555
Q ss_pred HHHHcCCHHHHHHHHhcCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHcCCHHHHHH
Q 009805 132 EAVQCGNLDAVKILMEAGPNFPYSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAVNSYAADVVEK 211 (525)
Q Consensus 132 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ 211 (525)
+|+..|+.+++++|+++|++++ ..|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|++.|+.+++++
T Consensus 76 ~A~~~g~~~~v~~Ll~~gadvn-~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~ 154 (169)
T 4gpm_A 76 HAAENGHKEVVKLLISKGADVN-AKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKL 154 (169)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HHHHcCCHHHHHHHHHCcCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHH
Confidence 5555555555555555444443 344444555555555555555555555555544445555555555555555555555
Q ss_pred HHHhcCc
Q 009805 212 LLAKKRH 218 (525)
Q Consensus 212 Ll~~~~~ 218 (525)
|+++|++
T Consensus 155 Ll~~GA~ 161 (169)
T 4gpm_A 155 LEKQGGW 161 (169)
T ss_dssp HHTC---
T ss_pred HHHCCCC
Confidence 5554444
No 53
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.97 E-value=1.7e-31 Score=250.89 Aligned_cols=209 Identities=22% Similarity=0.246 Sum_probs=172.4
Q ss_pred CCCchhhhhhhcccccccCCchhhHHHHHHHHHhCCccccccC----CCCCcHHHHHH---HcCChhHHHHHHHhhhcCC
Q 009805 33 NKHTVLHVNIARQSLKNKEGESVSTKFVEQILEICPSLLIQTN----AKGDSPLHAAA---KCGRPAVVKVLIEFAKKQP 105 (525)
Q Consensus 33 ~g~t~Lh~A~~~~~~~~~~g~~~~~~~ll~~~~~~~~~l~~~~----~~g~tpLh~A~---~~g~~~~v~~Ll~~~~~~~ 105 (525)
.+.++||.|++. |+.+.++.|++.+...+..++..+ ..|.||||+|+ +.|+.+++++|++.+++..
T Consensus 4 ~~~~~L~~A~~~-------g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~ 76 (260)
T 3jxi_A 4 FNRPILFDIVSR-------GSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTG 76 (260)
T ss_dssp CCHHHHHHHHHH-------TCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTT
T ss_pred chHHHHHHHHHh-------CCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhccccc
Confidence 678999999999 999988888775555566666554 77999999999 7799999999999987643
Q ss_pred hhHhhhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCCC--------------CCCchHHHHHHHcC
Q 009805 106 TAMKCCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFPYSAN--------------VNGETPLYMAAARG 171 (525)
Q Consensus 106 ~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~--------------~~g~tpL~~A~~~g 171 (525)
.... .....++..|..|.||||+|+..|+.+++++|+++|++++ ..+ ..|.||||+|+..|
T Consensus 77 ~~~~----~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g 151 (260)
T 3jxi_A 77 NMRE----FINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVH-AQARGRFFQPKDEGGYFYFGELPLSLAACTN 151 (260)
T ss_dssp CHHH----HHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCEECCCSSSCCCCSCCSCSSHHHHHHHTT
T ss_pred chHh----hhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcC-ccccccccCcccccccccCCCCHHHHHHHcC
Confidence 2110 0011134456689999999999999999999999999987 444 57999999999999
Q ss_pred CHHHHHHHHH---hcCCCCCCCCCCCcHHHHHHHcCC---------HHHHHHHHHhcCcCc------ccCCCCCCcHHHH
Q 009805 172 SKKMVAEILE---KCSSAAHDGPNGKTALHAAVNSYA---------ADVVEKLLAKKRHLT------RERDDCGWTPLHH 233 (525)
Q Consensus 172 ~~~~v~~Ll~---~~~~~~~~~~~g~t~L~~A~~~~~---------~~~~~~Ll~~~~~~~------~~~d~~g~tpL~~ 233 (525)
+.+++++|++ +|++++.+|..|.||||+|+..++ .+++++|++.+++.. +.+|..|+||||+
T Consensus 152 ~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~ 231 (260)
T 3jxi_A 152 QPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMM 231 (260)
T ss_dssp CHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHH
T ss_pred CHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHH
Confidence 9999999999 899999999999999999998777 689999999988742 5688888888888
Q ss_pred HHHcCChhHHHHHhhcCCCc
Q 009805 234 SAYLGLKDITALLLEFDGSS 253 (525)
Q Consensus 234 A~~~g~~~~v~~Ll~~~~~~ 253 (525)
|+..|+.+++++|+++|+..
T Consensus 232 A~~~g~~~~v~~Ll~~g~~~ 251 (260)
T 3jxi_A 232 AAKTGKIGIFQHIIRREIAD 251 (260)
T ss_dssp HHHTTCHHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHhCCCc
Confidence 88888888888888887654
No 54
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.97 E-value=6.3e-31 Score=247.00 Aligned_cols=194 Identities=19% Similarity=0.217 Sum_probs=169.4
Q ss_pred hHHHHHHHcCCcchhhhhhh----hcccccccc----CCCCchhhhhh---hcccccccCCchhhHHHHHHHHHhCC---
Q 009805 3 PKLYEAATNGEIEPFNGIAK----DNLRSIVTH----NNKHTVLHVNI---ARQSLKNKEGESVSTKFVEQILEICP--- 68 (525)
Q Consensus 3 ~~L~~A~~~g~~~~v~~ll~----~~~~~~~~~----~~g~t~Lh~A~---~~~~~~~~~g~~~~~~~ll~~~~~~~--- 68 (525)
++||.||+.|+.+.++.|++ .+.+.+..+ ..|.||||+|+ +. |+.+++++|++......
T Consensus 7 ~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~-------g~~~~v~~Ll~~g~~~~~~~ 79 (260)
T 3jxi_A 7 PILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSA-------GRNDTIPILLDIAEKTGNMR 79 (260)
T ss_dssp HHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBT-------TBCTHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhc-------CCHHHHHHHHHhcccccchH
Confidence 57999999999998888777 677766554 56999999998 78 99999999988533211
Q ss_pred ----ccccccCCCCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcCcc--------------CCCChHh
Q 009805 69 ----SLLIQTNAKGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLTN--------------EEENTAL 130 (525)
Q Consensus 69 ----~~l~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~~--------------~~g~t~L 130 (525)
......|..|.||||+|+..|+.++|++|++.+++ ++.++ ..|.|||
T Consensus 80 ~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~---------------~~~~~~~~~~~~~~~~~~~~~g~tpL 144 (260)
T 3jxi_A 80 EFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGAD---------------VHAQARGRFFQPKDEGGYFYFGELPL 144 (260)
T ss_dssp HHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCC---------------TTCCCEECCCSSSCCCCSCCSCSSHH
T ss_pred hhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCC---------------cCccccccccCcccccccccCCCCHH
Confidence 22445566899999999999999999999999987 44455 6899999
Q ss_pred HHHHHcCCHHHHHHHHh---cCCCCCCCCCCCCchHHHHHHHcCC---------HHHHHHHHHhcCCC-------CCCCC
Q 009805 131 HEAVQCGNLDAVKILME---AGPNFPYSANVNGETPLYMAAARGS---------KKMVAEILEKCSSA-------AHDGP 191 (525)
Q Consensus 131 h~A~~~g~~~~v~~Ll~---~~~~~~~~~~~~g~tpL~~A~~~g~---------~~~v~~Ll~~~~~~-------~~~~~ 191 (525)
|+|+..|+.+++++|++ +|++++ ..|..|+||||+|+..|+ .+++++|+++|+++ +.+|.
T Consensus 145 ~~A~~~g~~~~v~~Ll~~~~~ga~~~-~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~ 223 (260)
T 3jxi_A 145 SLAACTNQPHIVHYLTENGHKQADLR-RQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNN 223 (260)
T ss_dssp HHHHHTTCHHHHHHHHHCSSCCCCTT-CCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCT
T ss_pred HHHHHcCCHHHHHHHHhccccCCCCc-ccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccC
Confidence 99999999999999999 899987 788899999999999888 79999999999888 67999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhcCcC
Q 009805 192 NGKTALHAAVNSYAADVVEKLLAKKRHL 219 (525)
Q Consensus 192 ~g~t~L~~A~~~~~~~~~~~Ll~~~~~~ 219 (525)
.|.||||+|+..|+.+++++|++++++.
T Consensus 224 ~g~tpL~~A~~~g~~~~v~~Ll~~g~~~ 251 (260)
T 3jxi_A 224 DGLSPLMMAAKTGKIGIFQHIIRREIAD 251 (260)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhCCCc
Confidence 9999999999999999999999998774
No 55
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.97 E-value=1.7e-29 Score=225.73 Aligned_cols=164 Identities=25% Similarity=0.298 Sum_probs=148.7
Q ss_pred cccccCCCCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcC
Q 009805 70 LLIQTNAKGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAG 149 (525)
Q Consensus 70 ~l~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~ 149 (525)
.++.+|..|.||||+|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+.+++++|+++|
T Consensus 27 ~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~---------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 91 (192)
T 2rfm_A 27 LRNYRDSYNRTPLMVACMLGMENAIDKLVENFDK---------------LEDKDIEGSTALIWAVKNNRLGIAEKLLSKG 91 (192)
T ss_dssp HHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCC---------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHT
T ss_pred HHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccc---------------cccccccCccHHHHHHHcCCHHHHHHHHHCC
Confidence 3456889999999999999999999999999876 5678889999999999999999999999999
Q ss_pred CCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCcccCCCCCCc
Q 009805 150 PNFPYSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAVNSYAADVVEKLLAKKRHLTRERDDCGWT 229 (525)
Q Consensus 150 ~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~t 229 (525)
++++ ..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|++.+++ ++.+|..|.|
T Consensus 92 ~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t 169 (192)
T 2rfm_A 92 SNVN-TKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGAD-ISARDLTGLT 169 (192)
T ss_dssp CCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-TTCBCTTSCB
T ss_pred CCCC-CCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCC
Confidence 9876 6788899999999999999999999999999999999999999999999999999999999888 6788889999
Q ss_pred HHHHHHHcCChhHHHHHhhcC
Q 009805 230 PLHHSAYLGLKDITALLLEFD 250 (525)
Q Consensus 230 pL~~A~~~g~~~~v~~Ll~~~ 250 (525)
|||+|+..|+.+++++|++++
T Consensus 170 ~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 170 AEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp HHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHhCcHHHHHHHHhcc
Confidence 999999999999999998764
No 56
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.96 E-value=1.9e-29 Score=238.61 Aligned_cols=192 Identities=25% Similarity=0.299 Sum_probs=142.4
Q ss_pred CCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCCC
Q 009805 78 GDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFPYSAN 157 (525)
Q Consensus 78 g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~ 157 (525)
+.+++|.|+..|+.+.++.+++.+.+ ..++.+|.+|.||||+|+..|+.+++++|++.|+......+
T Consensus 76 ~~~~l~~a~~~~~~~~~~~l~~~~~~-------------~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~ 142 (276)
T 4hbd_A 76 CRSDAHPELVRRHLVTFRAMSARLLD-------------YVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQN 142 (276)
T ss_dssp HSTTCCHHHHHHHHHHHHHHCHHHHH-------------HHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCC
T ss_pred hccCCCHHHHHHHHHHHHHHHHHHHh-------------hcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCC
Confidence 45677788888888888887776543 23667788888888888888888888888888873233677
Q ss_pred CCCchHHHHHH-----HcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCcccCCCCCCcHHH
Q 009805 158 VNGETPLYMAA-----ARGSKKMVAEILEKCSSAAHDGPNGKTALHAAVNSYAADVVEKLLAKKRHLTRERDDCGWTPLH 232 (525)
Q Consensus 158 ~~g~tpL~~A~-----~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~ 232 (525)
..|.||||+|+ ..++.+++++|++.|.+.+..+..|.||||+|+..|+.+++++|++.+++ ++.+|..|+||||
T Consensus 143 ~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad-~n~~d~~G~TpLh 221 (276)
T 4hbd_A 143 RAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEAD-VNVQDDDGSTALM 221 (276)
T ss_dssp TTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHH
T ss_pred CCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-CCCCCCCCCCHHH
Confidence 77888888887 55777788888888877777777788888888888888888888887777 5677777777777
Q ss_pred HHHHcCChhHHHHHhh-cCCCcchhcccCCCCcHHHHHHhcCCHHHHHHHHhhC
Q 009805 233 HSAYLGLKDITALLLE-FDGSSALILDKDRKMTALLMAASQGHESLAGTIIAHY 285 (525)
Q Consensus 233 ~A~~~g~~~~v~~Ll~-~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~ 285 (525)
+|+..|+.+++++|++ .|.+. +..+. .|.||||+|+..|+.+++++|+++.
T Consensus 222 ~A~~~g~~~iv~~Ll~~~gad~-~~~d~-~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 222 CACEHGHKEIAGLLLAVPSCDI-SLTDR-DGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp HHHHHTCHHHHHHHHTSTTCCT-TCCCT-TSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred HHHHCCCHHHHHHHHhcCCCCC-cCcCC-CCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 7777777777777777 56655 33444 5777777777777777777777664
No 57
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.96 E-value=1.1e-29 Score=240.29 Aligned_cols=194 Identities=19% Similarity=0.215 Sum_probs=174.7
Q ss_pred CCCchhhhhhhcccccccCCchhhHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhh
Q 009805 33 NKHTVLHVNIARQSLKNKEGESVSTKFVEQILEICPSLLIQTNAKGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCA 112 (525)
Q Consensus 33 ~g~t~Lh~A~~~~~~~~~~g~~~~~~~ll~~~~~~~~~l~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~ 112 (525)
...+++|.|+.. |+.+.++.+++... ...++.+|.+|.||||+|+..|+.++|++|++.++..
T Consensus 75 ~~~~~l~~a~~~-------~~~~~~~~l~~~~~--~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~-------- 137 (276)
T 4hbd_A 75 ACRSDAHPELVR-------RHLVTFRAMSARLL--DYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCK-------- 137 (276)
T ss_dssp HHSTTCCHHHHH-------HHHHHHHHHCHHHH--HHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCC--------
T ss_pred HhccCCCHHHHH-------HHHHHHHHHHHHHH--hhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCc--------
Confidence 456889999999 99999999866321 2246788999999999999999999999999999721
Q ss_pred hhhHHHhcCccCCCChHhHHHH-----HcCCHHHHHHHHhcCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCC
Q 009805 113 KTAWQMLGLTNEEENTALHEAV-----QCGNLDAVKILMEAGPNFPYSANVNGETPLYMAAARGSKKMVAEILEKCSSAA 187 (525)
Q Consensus 113 ~~~~~~l~~~~~~g~t~Lh~A~-----~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~ 187 (525)
++..|..|.||||+|+ ..++.+++++|++.|.... ..+..|.||||+|+..|+.+++++|+++|++++
T Consensus 138 ------~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~-~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n 210 (276)
T 4hbd_A 138 ------VDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINA-KASQAGQTALMLAVSHGRVDVVKALLACEADVN 210 (276)
T ss_dssp ------TTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTC-CCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred ------CCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCcc-ccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC
Confidence 6678999999999999 6689999999999997765 678889999999999999999999999999999
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHH-hcCcCcccCCCCCCcHHHHHHHcCChhHHHHHhhcCC
Q 009805 188 HDGPNGKTALHAAVNSYAADVVEKLLA-KKRHLTRERDDCGWTPLHHSAYLGLKDITALLLEFDG 251 (525)
Q Consensus 188 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~-~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~ 251 (525)
.+|..|.||||+|+..|+.+++++|++ .+.+ ++.+|..|.||||+|+..|+.+++++|+++..
T Consensus 211 ~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad-~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~~ 274 (276)
T 4hbd_A 211 VQDDDGSTALMCACEHGHKEIAGLLLAVPSCD-ISLTDRDGSTALMVALDAGQSEIASMLYSRMN 274 (276)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHHCC
T ss_pred CCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCC-CcCcCCCCCCHHHHHHHcCCHHHHHHHHhccC
Confidence 999999999999999999999999999 6777 68899999999999999999999999998753
No 58
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=5.1e-29 Score=218.43 Aligned_cols=169 Identities=22% Similarity=0.230 Sum_probs=105.5
Q ss_pred CchhhhhhhcccccccCCchhhHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhhhh
Q 009805 35 HTVLHVNIARQSLKNKEGESVSTKFVEQILEICPSLLIQTNAKGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKT 114 (525)
Q Consensus 35 ~t~Lh~A~~~~~~~~~~g~~~~~~~ll~~~~~~~~~l~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~ 114 (525)
.+|||.|+.. |+.+++++++ ...+..++.+|..|.||||+|+..|+.+++++|++.+++
T Consensus 3 ~~~L~~A~~~-------g~~~~v~~ll---~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----------- 61 (172)
T 3v30_A 3 SLSIHQLAAQ-------GELDQLKEHL---RKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGAD----------- 61 (172)
T ss_dssp -CCHHHHHHT-------TCHHHHHHHH---TTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-----------
T ss_pred hhhHHHHHHc-------CCHHHHHHHH---HcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----------
Confidence 4666666666 6666666663 334444566666666666666666666666666666655
Q ss_pred hHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCC
Q 009805 115 AWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFPYSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGK 194 (525)
Q Consensus 115 ~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~ 194 (525)
++.+|..|.||||+|+..|+.+++++|+++|++++ ..+..|.||||+|+..|+.+++++|+++|++++.++..|.
T Consensus 62 ----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~ 136 (172)
T 3v30_A 62 ----PHILAKERESALSLASTGGYTDIVGLLLERDVDIN-IYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGY 136 (172)
T ss_dssp ----TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred ----chhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCC
Confidence 44556666666666666666666666666666654 4556666666666666666666666666666666666666
Q ss_pred cHHHHHHHcCCHHHHHHHHHhcCcCcccCCCCCCcH
Q 009805 195 TALHAAVNSYAADVVEKLLAKKRHLTRERDDCGWTP 230 (525)
Q Consensus 195 t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tp 230 (525)
||||+|+..++.+++++|++++++ ....+..|.||
T Consensus 137 t~l~~A~~~~~~~~~~~L~~~~~~-~~~~~~~~~~p 171 (172)
T 3v30_A 137 TPMDLAVALGYRKVQQVIENHILK-LFQSNLVPADP 171 (172)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHHHH-HSCC-------
T ss_pred CHHHHHHHhCcHHHHHHHHHHHHH-HhcccCCCCCC
Confidence 666666666666666666666665 23444444443
No 59
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.96 E-value=6.2e-29 Score=222.07 Aligned_cols=164 Identities=21% Similarity=0.210 Sum_probs=153.1
Q ss_pred ccccccCCCCchhhhhhhcccccccCCchhhHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCChhHHHHHHHhhhcCC
Q 009805 26 RSIVTHNNKHTVLHVNIARQSLKNKEGESVSTKFVEQILEICPSLLIQTNAKGDSPLHAAAKCGRPAVVKVLIEFAKKQP 105 (525)
Q Consensus 26 ~~~~~~~~g~t~Lh~A~~~~~~~~~~g~~~~~~~ll~~~~~~~~~l~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~ 105 (525)
..+.++..|.||||+|+.. |+.+++++|++. +.+++..|..|.||||+|+..|+.+++++|++.+.+
T Consensus 27 ~~n~~d~~g~t~L~~A~~~-------g~~~~v~~Ll~~----~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-- 93 (192)
T 2rfm_A 27 LRNYRDSYNRTPLMVACML-------GMENAIDKLVEN----FDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSN-- 93 (192)
T ss_dssp HHTCCCTTCCCHHHHHHHH-------TCGGGHHHHHHH----HCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC--
T ss_pred HHhCcCCCCCCHHHHHHHc-------CCHHHHHHHHHh----ccccccccccCccHHHHHHHcCCHHHHHHHHHCCCC--
Confidence 3456788999999999999 999999999874 456778899999999999999999999999999987
Q ss_pred hhHhhhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCC
Q 009805 106 TAMKCCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFPYSANVNGETPLYMAAARGSKKMVAEILEKCSS 185 (525)
Q Consensus 106 ~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ 185 (525)
++.+|..|.||||+|+..|+.+++++|+++|++++ ..+..|.||||+|+..|+.+++++|+++|++
T Consensus 94 -------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 159 (192)
T 2rfm_A 94 -------------VNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVN-DRNLEGETPLIVASKYGRSEIVKKLLELGAD 159 (192)
T ss_dssp -------------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSS-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred -------------CCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 66789999999999999999999999999999987 7788999999999999999999999999999
Q ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHHHHHhc
Q 009805 186 AAHDGPNGKTALHAAVNSYAADVVEKLLAKK 216 (525)
Q Consensus 186 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~ 216 (525)
++.+|..|.||||+|+..++.+++++|++.+
T Consensus 160 ~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 160 ISARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp TTCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 9999999999999999999999999999875
No 60
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.96 E-value=3.1e-29 Score=217.46 Aligned_cols=158 Identities=21% Similarity=0.185 Sum_probs=106.7
Q ss_pred CCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCC
Q 009805 77 KGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFPYSA 156 (525)
Q Consensus 77 ~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~ 156 (525)
...||||.|+..|+.+++++|++.+.+ ++.+|..|.||||+|+. |+.+++++|+++|++++ ..
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~---------------~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~-~~ 66 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVN---------------VNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPD-LK 66 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCC---------------TTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTT-CC
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCC---------------ccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCC-CC
Confidence 345677777777777777777766655 44566667777777666 77777777777766655 45
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCcccCCCCCCcHHHHHHH
Q 009805 157 NVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAVNSYAADVVEKLLAKKRHLTRERDDCGWTPLHHSAY 236 (525)
Q Consensus 157 ~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~ 236 (525)
+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|++.+++..+.+|..|.||||+|+.
T Consensus 67 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~ 146 (162)
T 1ihb_A 67 DRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARL 146 (162)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHH
Confidence 66677777777777777777777777777766667777777777777777777777777666556666666666666666
Q ss_pred cCChhHHHHHhhcCC
Q 009805 237 LGLKDITALLLEFDG 251 (525)
Q Consensus 237 ~g~~~~v~~Ll~~~~ 251 (525)
.|+.+++++|+++|+
T Consensus 147 ~~~~~~~~~Ll~~GA 161 (162)
T 1ihb_A 147 YGRNEVVSLMQANGA 161 (162)
T ss_dssp TTCHHHHHHHHHTC-
T ss_pred cCCHHHHHHHHHhCC
Confidence 666666666666654
No 61
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.96 E-value=1.5e-31 Score=262.00 Aligned_cols=265 Identities=16% Similarity=0.099 Sum_probs=171.0
Q ss_pred CchhhHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcCccCCCChHhH
Q 009805 52 GESVSTKFVEQILEICPSLLIQTNAKGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLTNEEENTALH 131 (525)
Q Consensus 52 g~~~~~~~ll~~~~~~~~~l~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh 131 (525)
++.++++++.+ .+.++.||||+|++.|+.++|++|++.++.... ....+..|.||||
T Consensus 77 ~~~~~~~~l~~-----------~g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~------------~~~~~~~~~tpL~ 133 (376)
T 2aja_A 77 NAKQLWSDAHK-----------KGIKSEVICFVAAITGCSSALDTLCLLLTSDEI------------VKVIQAENYQAFR 133 (376)
T ss_dssp TCTTHHHHHHH-----------HTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSS------------CC--CHHHHHHHH
T ss_pred CCHHHHHHHHH-----------cCCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHH------------HHHhccCCCCHHH
Confidence 55666666644 334556888888888888888888888763110 1123456778888
Q ss_pred HHHHcCCHHHHHHHHhcCCCCC--CCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCC--CCCCCCcHHHHHH-HcCCH
Q 009805 132 EAVQCGNLDAVKILMEAGPNFP--YSANVNGETPLYMAAARGSKKMVAEILEKCSSAAH--DGPNGKTALHAAV-NSYAA 206 (525)
Q Consensus 132 ~A~~~g~~~~v~~Ll~~~~~~~--~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~--~~~~g~t~L~~A~-~~~~~ 206 (525)
+|+..|+.++|++|+++|++.. ...+.. .||||+|+..|+.+++++|+++|++++. .|..|.||||+|+ ..|+.
T Consensus 134 ~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~ 212 (376)
T 2aja_A 134 LAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHH 212 (376)
T ss_dssp HHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCH
T ss_pred HHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCH
Confidence 8888888888888888886421 011222 7888888888888888888888887766 6777888888888 88888
Q ss_pred HHHHHHHHhcCcCcccCCCCCCcHHHHHHHcCChhHHHHHhhcCCCcchhcccCCCCcHHHHHHhcCCHHHH--------
Q 009805 207 DVVEKLLAKKRHLTRERDDCGWTPLHHSAYLGLKDITALLLEFDGSSALILDKDRKMTALLMAASQGHESLA-------- 278 (525)
Q Consensus 207 ~~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v-------- 278 (525)
+++++|++.+.. |.||||+|+..|+.+++++|++++.+.. . ..++++.|+..|+.+++
T Consensus 213 eiv~~Ll~~ga~--------~~taL~~Aa~~g~~evv~lL~~~ga~~~-~-----~~~~l~~A~~~g~~~vv~~~~~~~~ 278 (376)
T 2aja_A 213 NVINFLLDCPVM--------LAYAEIHEFEYGEKYVNPFIARHVNRLK-E-----MHDAFKLSNPDGVFDLVTKSECLQG 278 (376)
T ss_dssp HHHHHHTTSHHH--------HHHHHHCTTTTTTTTHHHHHHHHHHHHH-H-----HHTTTTTTSSSSCCCCSSHHHHHHH
T ss_pred HHHHHHHhCCCc--------cchHHHHHHHCCCHHHHHHHHhcCcccc-c-----ccHHHHHHHHCCChhhhcHHhhhhh
Confidence 888888876532 6788888888888888888888776542 1 12467777777776633
Q ss_pred ----HHHHhhCCCccccccCCCCchhHHHHhcCCHHHHHHHhhCcccccc--ccccCCCCChHHHHHHhcCchhHHHHHH
Q 009805 279 ----GTIIAHYPECYDLVDNGGWNVLHFLMVSLHESKLKRLLKDPLYKSF--IDEKNEMGNTPLHILATLSARTCNEIVR 352 (525)
Q Consensus 279 ----~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~ll~~~~~~~~--in~~d~~G~T~Lh~A~~~~~~~~~~ll~ 352 (525)
+.|+.++.. +..+.+++|++....+.. .....+.++||||+|++.|...+..+|.
T Consensus 279 ~~~~~~li~~~~~-------------------~~~~~~~~Ll~~~~vk~l~~~g~~~n~~~~~L~~A~~~g~~e~v~lLl 339 (376)
T 2aja_A 279 FYMLRNLIRRNDE-------------------VLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLL 339 (376)
T ss_dssp HHHHHHHHHHCCG-------------------GGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHHT
T ss_pred HHHHHHHHHcchh-------------------hHHHHHHHHHhChhhhhhhccCCCCCCccHHHHHHHHcCcHHHHHHHH
Confidence 334443311 124556666664332211 2334567889999999999877744444
Q ss_pred HhCCCChHHHhccCCChHHHHhhcC
Q 009805 353 QIGKGDTQAVNKKKISVKHIELYGC 377 (525)
Q Consensus 353 ~~~~~d~~~~n~~g~t~l~~a~~~~ 377 (525)
+ ...+++..|+|++++|..++
T Consensus 340 ~----~~~v~~~~~~~~~~~~~~~~ 360 (376)
T 2aja_A 340 S----IPSVLALTKANNYYINETGG 360 (376)
T ss_dssp T----SHHHHHSCC-----------
T ss_pred c----ChHHHHHHHHhccccccccc
Confidence 2 24789999999999998654
No 62
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=1.2e-28 Score=214.80 Aligned_cols=159 Identities=21% Similarity=0.254 Sum_probs=125.7
Q ss_pred CCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCC
Q 009805 77 KGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFPYSA 156 (525)
Q Consensus 77 ~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~ 156 (525)
.|.||||.|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+.+++++|+++|++++ ..
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~---------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~ 65 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENV---------------INHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQ-LL 65 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSC---------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CC
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCC---------------cCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC-Cc
Confidence 467888888888888888888887765 55677788888888888888888888888887765 56
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCcccCCCCCCcHHHHHHH
Q 009805 157 NVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAVNSYAADVVEKLLAKKRHLTRERDDCGWTPLHHSAY 236 (525)
Q Consensus 157 ~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~ 236 (525)
+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|++.+++ ++.+|..|.||||+|+.
T Consensus 66 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~ 144 (167)
T 3v31_A 66 GKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGAD-PTIETDSGYNSMDLAVA 144 (167)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHH
Confidence 67788888888888888888888888888888888888888888888888888888887777 46677777888888888
Q ss_pred cCChhHHHHHhhcCCC
Q 009805 237 LGLKDITALLLEFDGS 252 (525)
Q Consensus 237 ~g~~~~v~~Ll~~~~~ 252 (525)
.|+.+++++|++++.+
T Consensus 145 ~~~~~~~~~L~~~~~~ 160 (167)
T 3v31_A 145 LGYRSVQQVIESHLLK 160 (167)
T ss_dssp HTCHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHH
Confidence 7777777777776543
No 63
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=1.6e-28 Score=214.50 Aligned_cols=160 Identities=26% Similarity=0.359 Sum_probs=120.6
Q ss_pred cCCCCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCC
Q 009805 74 TNAKGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFP 153 (525)
Q Consensus 74 ~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~ 153 (525)
....+.||||.|++.|+.++|++|++.+.+ ++.+|..|.||||+|+..|+.+++++|+++|++++
T Consensus 10 ~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~---------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 74 (169)
T 2y1l_E 10 HGSDLGKKLLEAARAGRDDEVRILMANGAD---------------VNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVN 74 (169)
T ss_dssp ---CHHHHHHHHHHHTCHHHHHHHHHTTCC---------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred CCCcccchHHHHHHcCCHHHHHHHHHCCCC---------------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 445566778888888888888888887766 55667778888888888888888888888777765
Q ss_pred CCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCcccCCCCCCcHHHH
Q 009805 154 YSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAVNSYAADVVEKLLAKKRHLTRERDDCGWTPLHH 233 (525)
Q Consensus 154 ~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~ 233 (525)
..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|++++++ .+.+|..|.||||+
T Consensus 75 -~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~ 152 (169)
T 2y1l_E 75 -AVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGAD-VNAQDKFGKTAFDI 152 (169)
T ss_dssp -CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHH
T ss_pred -ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHH
Confidence 5666778888888888888888888888877777777788888888888888888888877777 46677777777777
Q ss_pred HHHcCChhHHHHHhhcC
Q 009805 234 SAYLGLKDITALLLEFD 250 (525)
Q Consensus 234 A~~~g~~~~v~~Ll~~~ 250 (525)
|+..|+.+++++|++.|
T Consensus 153 A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 153 SIDNGNEDLAEILQKLN 169 (169)
T ss_dssp HHHTTCHHHHHHHHTC-
T ss_pred HHHhCCHHHHHHHHHcC
Confidence 77777777777777654
No 64
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=1.8e-28 Score=213.73 Aligned_cols=161 Identities=25% Similarity=0.271 Sum_probs=151.2
Q ss_pred CCCchhhhhhhcccccccCCchhhHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhh
Q 009805 33 NKHTVLHVNIARQSLKNKEGESVSTKFVEQILEICPSLLIQTNAKGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCA 112 (525)
Q Consensus 33 ~g~t~Lh~A~~~~~~~~~~g~~~~~~~ll~~~~~~~~~l~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~ 112 (525)
.|.||||.|+.. |+.+++++|++. +.+++.+|..|.||||+|+..|+.+++++|++.+.+
T Consensus 2 ~~~t~L~~A~~~-------g~~~~v~~ll~~----~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~--------- 61 (167)
T 3v31_A 2 ANSLSVHQLAAQ-------GEMLYLATRIEQ----ENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGAD--------- 61 (167)
T ss_dssp TTCCCHHHHHHT-------TCHHHHHHHHHH----SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---------
T ss_pred CCcchHHHHHHC-------CCHHHHHHHHHc----CCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCC---------
Confidence 588999999999 999999999774 566888999999999999999999999999999887
Q ss_pred hhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCC
Q 009805 113 KTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFPYSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPN 192 (525)
Q Consensus 113 ~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~ 192 (525)
++..|..|.||||+|+..|+.+++++|+++|++++ ..+..|.||||+|+..|+.+++++|+++|++++.++..
T Consensus 62 ------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 134 (167)
T 3v31_A 62 ------PQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVN-EYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDS 134 (167)
T ss_dssp ------TTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred ------CCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCC-cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC
Confidence 56789999999999999999999999999999987 77889999999999999999999999999999999999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhcCcCc
Q 009805 193 GKTALHAAVNSYAADVVEKLLAKKRHLT 220 (525)
Q Consensus 193 g~t~L~~A~~~~~~~~~~~Ll~~~~~~~ 220 (525)
|.||||+|+..|+.+++++|++++..+.
T Consensus 135 g~t~l~~A~~~~~~~~~~~L~~~~~~~~ 162 (167)
T 3v31_A 135 GYNSMDLAVALGYRSVQQVIESHLLKLL 162 (167)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 9999999999999999999999987643
No 65
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=1.3e-28 Score=215.89 Aligned_cols=170 Identities=21% Similarity=0.153 Sum_probs=136.2
Q ss_pred CChHhHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHcCC
Q 009805 126 ENTALHEAVQCGNLDAVKILMEAGPNFPYSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAVNSYA 205 (525)
Q Consensus 126 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~ 205 (525)
+.||||.|+..|+.++++.|++.+++.....+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGY 81 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCC
Confidence 45889999999999999999999887555778889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCcCcccCCCCCCcHHHHHHHcCChhHHHHHhhcCCCcchhcccCCCCcHHHHHHhcCCHHHHHHHHhhC
Q 009805 206 ADVVEKLLAKKRHLTRERDDCGWTPLHHSAYLGLKDITALLLEFDGSSALILDKDRKMTALLMAASQGHESLAGTIIAHY 285 (525)
Q Consensus 206 ~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~ 285 (525)
.+++++|++.+.+ .+.+|..|.||||+|+..|+.+++++|+++|++. ...+. .|.||||+|+..|+.+++++|++++
T Consensus 82 ~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~-~g~t~l~~A~~~~~~~~~~~L~~~~ 158 (172)
T 3v30_A 82 TDIVGLLLERDVD-INIYDWNGGTPLLYAVRGNHVKCVEALLARGADL-TTEAD-SGYTPMDLAVALGYRKVQQVIENHI 158 (172)
T ss_dssp HHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT-TSCCHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCC-CCCCHHHHHHHhCcHHHHHHHHHHH
Confidence 9999999988887 5777888888888888888888888888888776 33444 6788888888888888888888887
Q ss_pred CCccccccCCCCch
Q 009805 286 PECYDLVDNGGWNV 299 (525)
Q Consensus 286 ~~~~~~~d~~g~t~ 299 (525)
++ ....+..|.||
T Consensus 159 ~~-~~~~~~~~~~p 171 (172)
T 3v30_A 159 LK-LFQSNLVPADP 171 (172)
T ss_dssp HH-HSCC-------
T ss_pred HH-HhcccCCCCCC
Confidence 76 44455556554
No 66
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.96 E-value=1.8e-28 Score=212.56 Aligned_cols=159 Identities=20% Similarity=0.234 Sum_probs=136.1
Q ss_pred CCChHhHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHcC
Q 009805 125 EENTALHEAVQCGNLDAVKILMEAGPNFPYSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAVNSY 204 (525)
Q Consensus 125 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~ 204 (525)
...||||.|+..|+.+++++|+++|++++ ..+..|.||||+|+. |+.+++++|+++|++++.++..|.||||+|+..+
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~-~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 81 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNVN-AQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAG 81 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCTT-CCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCcc-ccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 45689999999999999999999998876 677889999999988 9999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcCcCcccCCCCCCcHHHHHHHcCChhHHHHHhhcCCCcchhcccCCCCcHHHHHHhcCCHHHHHHHHhh
Q 009805 205 AADVVEKLLAKKRHLTRERDDCGWTPLHHSAYLGLKDITALLLEFDGSSALILDKDRKMTALLMAASQGHESLAGTIIAH 284 (525)
Q Consensus 205 ~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~ 284 (525)
+.+++++|++.+.+ ++.+|..|.||||+|+..|+.+++++|++++++.....+. .|.||||+|+..|+.+++++|+++
T Consensus 82 ~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-~g~t~l~~A~~~~~~~~~~~Ll~~ 159 (162)
T 1ihb_A 82 FLDTLQTLLEFQAD-VNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNH-KGDTACDLARLYGRNEVVSLMQAN 159 (162)
T ss_dssp CHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCC-CCCcHHHHHHHcCCHHHHHHHHHh
Confidence 99999999998887 5778888889999999888888999988888875455555 688888888888888888888888
Q ss_pred CCC
Q 009805 285 YPE 287 (525)
Q Consensus 285 ~~~ 287 (525)
|++
T Consensus 160 GAd 162 (162)
T 1ihb_A 160 GAG 162 (162)
T ss_dssp C--
T ss_pred CCC
Confidence 764
No 67
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.96 E-value=3.7e-31 Score=242.86 Aligned_cols=198 Identities=17% Similarity=0.167 Sum_probs=123.7
Q ss_pred HHHHhcCCCCC--CCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCc
Q 009805 143 KILMEAGPNFP--YSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAVNSYAADVVEKLLAKKRHLT 220 (525)
Q Consensus 143 ~~Ll~~~~~~~--~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~ 220 (525)
+.|+++|++.. ...+..+.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++.+++ +
T Consensus 2 ~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~-~ 80 (229)
T 2vge_A 2 RSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGAN-V 80 (229)
T ss_dssp --------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-T
T ss_pred eehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-C
Confidence 45555555433 22344556666666666666666666666666666666666666666666666666666666666 4
Q ss_pred ccCCCCCCcHHHHHHHcCChhHHHHHhhcCCCcchhcccCCCCcHHHHH--HhcCCHHHHHHHHhhCCCccccccCCCCc
Q 009805 221 RERDDCGWTPLHHSAYLGLKDITALLLEFDGSSALILDKDRKMTALLMA--ASQGHESLAGTIIAHYPECYDLVDNGGWN 298 (525)
Q Consensus 221 ~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpL~~A--~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t 298 (525)
+.+|..|+||||+|+..|+.+++++|+++|++.....+. .|.||||+| +..|+.+++++|++.+++ ++..|..|.|
T Consensus 81 n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~-~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~-~~~~~~~~~~ 158 (229)
T 2vge_A 81 NSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLS-DGATAFEKCDPYREGYADCATYLADVEQS-MGLMNSGAVY 158 (229)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSS-TTCCTGGGCCTTSTTHHHHHHHHHHHHHH-TTTSGGGEEE
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCC-CCCCHHHHHHHHhcChHHHHHHHHHcCCC-cccccCCchH
Confidence 566666777777777777777777777766665332222 577777777 777777777777777776 5667777778
Q ss_pred hhHHHHhcCCHHHHHHHhhCccccccccccCCCCChHHHHHHhcCchhH
Q 009805 299 VLHFLMVSLHESKLKRLLKDPLYKSFIDEKNEMGNTPLHILATLSARTC 347 (525)
Q Consensus 299 ~Lh~A~~~~~~~~~~~ll~~~~~~~~in~~d~~G~T~Lh~A~~~~~~~~ 347 (525)
++|.++..... +.+++.+ ...+++.+|..|+||||+|+..|...+
T Consensus 159 ~l~~~~~~~~~---~~ll~~g-a~~~~~~~d~~G~TpL~~A~~~g~~~~ 203 (229)
T 2vge_A 159 ALWDYSAEFGD---ELSFREG-ESVTVLRRDGPEETDWWWAALHGQEGY 203 (229)
T ss_dssp ESSCBCCSSTT---BCCBCTT-CEEEEEESSCTTCSSEEEEEETTEEEE
T ss_pred HHHHHhhcccc---ccCcccc-ccccccccCCCcccHHHHHHHcCCcce
Confidence 87755544432 3333321 123467788888888888888875544
No 68
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.96 E-value=3.6e-31 Score=259.36 Aligned_cols=278 Identities=15% Similarity=0.075 Sum_probs=193.8
Q ss_pred HHHHHHH-cCCcchhhhhhhhccccccccCCCCchhhhhhhcccccccCCchhhHHHHHHHHHhCCccccccCCCCCcHH
Q 009805 4 KLYEAAT-NGEIEPFNGIAKDNLRSIVTHNNKHTVLHVNIARQSLKNKEGESVSTKFVEQILEICPSLLIQTNAKGDSPL 82 (525)
Q Consensus 4 ~L~~A~~-~g~~~~v~~ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~g~~~~~~~ll~~~~~~~~~l~~~~~~g~tpL 82 (525)
.++.|.. .++.+.+++++++|.+. .||||+|++. |+.+++++|++. ..........+..|.|||
T Consensus 68 ~~~~a~~~~~~~~~~~~l~~~g~~~-------~T~Lh~Aa~~-------G~~e~v~~Ll~~-ga~~~~~~~~~~~~~tpL 132 (376)
T 2aja_A 68 CLYYAHYNRNAKQLWSDAHKKGIKS-------EVICFVAAIT-------GCSSALDTLCLL-LTSDEIVKVIQAENYQAF 132 (376)
T ss_dssp HHHHHHTTTTCTTHHHHHHHHTCCH-------HHHHHHHHHH-------CCHHHHHHHTTC---CCSSCC--CHHHHHHH
T ss_pred HHHHHHhcCCCHHHHHHHHHcCCCc-------CCHHHHHHHc-------CCHHHHHHHHHc-CCcHHHHHHhccCCCCHH
Confidence 3455555 57888999998877654 4999999999 999999999662 111112224556788999
Q ss_pred HHHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCC-CCCCCCc
Q 009805 83 HAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFPY-SANVNGE 161 (525)
Q Consensus 83 h~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~-~~~~~g~ 161 (525)
|+|++.|+.++|++|++.+++... .+..+.+ .||||+|+..|+.++|++|+++|++++. ..+..|.
T Consensus 133 ~~Aa~~G~~eiv~~Ll~~gad~~~------------~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~ 199 (376)
T 2aja_A 133 RLAAENGHLHVLNRLCELAPTEIM------------AMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENY 199 (376)
T ss_dssp HHHHHTTCHHHHHHHHHSCTTTHH------------HHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHhCCCCccc------------cccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCC
Confidence 999999999999999999864210 1112222 8999999999999999999999998652 2567799
Q ss_pred hHHHHHH-HcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCcccCCCCCCcHHHHHHHcCCh
Q 009805 162 TPLYMAA-ARGSKKMVAEILEKCSSAAHDGPNGKTALHAAVNSYAADVVEKLLAKKRHLTRERDDCGWTPLHHSAYLGLK 240 (525)
Q Consensus 162 tpL~~A~-~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~ 240 (525)
||||+|+ ..|+.+++++|++.|+ .|.||||+|+..|+.+++++|++.+++. +..+ ++++.|+..|+.
T Consensus 200 TpL~~Aa~~~G~~eiv~~Ll~~ga-------~~~taL~~Aa~~g~~evv~lL~~~ga~~-~~~~----~~l~~A~~~g~~ 267 (376)
T 2aja_A 200 YAFRWAAVGRGHHNVINFLLDCPV-------MLAYAEIHEFEYGEKYVNPFIARHVNRL-KEMH----DAFKLSNPDGVF 267 (376)
T ss_dssp HHHHHHHSTTCCHHHHHHHTTSHH-------HHHHHHHCTTTTTTTTHHHHHHHHHHHH-HHHH----TTTTTTSSSSCC
T ss_pred CHHHHHHHHCCCHHHHHHHHhCCC-------ccchHHHHHHHCCCHHHHHHHHhcCccc-cccc----HHHHHHHHCCCh
Confidence 9999999 9999999999999774 3899999999999999999999998873 3322 467788888887
Q ss_pred hHH------------HHHhhcCCCcchhcccCCCCcHHHHHHhcCCHHHHHHHHhhCCCc----cccccCCCCchhHHHH
Q 009805 241 DIT------------ALLLEFDGSSALILDKDRKMTALLMAASQGHESLAGTIIAHYPEC----YDLVDNGGWNVLHFLM 304 (525)
Q Consensus 241 ~~v------------~~Ll~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~----~~~~d~~g~t~Lh~A~ 304 (525)
+++ +.|+..+ ..+..+.+++|++..... .......+.||||+|+
T Consensus 268 ~vv~~~~~~~~~~~~~~li~~~--------------------~~~~~~~~~~Ll~~~~vk~l~~~g~~~n~~~~~L~~A~ 327 (376)
T 2aja_A 268 DLVTKSECLQGFYMLRNLIRRN--------------------DEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLAL 327 (376)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHC--------------------CGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHH
T ss_pred hhhcHHhhhhhHHHHHHHHHcc--------------------hhhHHHHHHHHHhChhhhhhhccCCCCCCccHHHHHHH
Confidence 754 3333322 112355667776543210 0112345678899999
Q ss_pred hcCCHHHHHHHhhCccccccccccCCCCChHHHHHHhcCchhH
Q 009805 305 VSLHESKLKRLLKDPLYKSFIDEKNEMGNTPLHILATLSARTC 347 (525)
Q Consensus 305 ~~~~~~~~~~ll~~~~~~~~in~~d~~G~T~Lh~A~~~~~~~~ 347 (525)
..|+.++++.|++.+ ..+|..|+|++.+|-..|....
T Consensus 328 ~~g~~e~v~lLl~~~------~v~~~~~~~~~~~~~~~~~~~~ 364 (376)
T 2aja_A 328 RLGNQGACALLLSIP------SVLALTKANNYYINETGGRLDL 364 (376)
T ss_dssp HHTCTTHHHHHTTSH------HHHHSCC---------------
T ss_pred HcCcHHHHHHHHcCh------HHHHHHHHhccccccccccccH
Confidence 999999999988743 5567788899888888875554
No 69
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.95 E-value=5.7e-30 Score=234.90 Aligned_cols=191 Identities=14% Similarity=0.016 Sum_probs=117.8
Q ss_pred HHHHHhcCCCCCC---CCCCCcHHHHHHHcCCHHHHHHHHHhcCcCcccCCCCCCcHHHHHHHcCChhHHHHHhhcCCCc
Q 009805 177 AEILEKCSSAAHD---GPNGKTALHAAVNSYAADVVEKLLAKKRHLTRERDDCGWTPLHHSAYLGLKDITALLLEFDGSS 253 (525)
Q Consensus 177 ~~Ll~~~~~~~~~---~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~ 253 (525)
+.|+++|++++.. +.++.||||.|+..|+.+++++|++.+++ ++.+|..|+||||+|+..|+.+++++|+++|++.
T Consensus 2 ~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~ 80 (229)
T 2vge_A 2 RSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMND-PSQPNEEGITALHNAICGANYSIVDFLITAGANV 80 (229)
T ss_dssp --------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred eehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 4566666665543 33455667777777777777777777666 4666777777777777777777777777776665
Q ss_pred chhcccCCCCcHHHHHHhcCCHHHHHHHHhhCCCcccccc-CCCCchhHHH--HhcCCHHHHHHHhhCccccccccccCC
Q 009805 254 ALILDKDRKMTALLMAASQGHESLAGTIIAHYPECYDLVD-NGGWNVLHFL--MVSLHESKLKRLLKDPLYKSFIDEKNE 330 (525)
Q Consensus 254 ~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~d-~~g~t~Lh~A--~~~~~~~~~~~ll~~~~~~~~in~~d~ 330 (525)
+..+. .|.||||+|+..|+.+++++|++++++ ++..+ ..|+||||+| +..++.+++++|++. +++++.+|.
T Consensus 81 -n~~d~-~g~tpLh~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~---ga~~~~~~~ 154 (229)
T 2vge_A 81 -NSPDS-HGWTPLHCAASCNDTVICMALVQHGAA-IFATTLSDGATAFEKCDPYREGYADCATYLADV---EQSMGLMNS 154 (229)
T ss_dssp -TCCCT-TCCCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHH---HHHTTTSGG
T ss_pred -CCCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCC-cccccCCCCCCHHHHHHHHhcChHHHHHHHHHc---CCCcccccC
Confidence 33343 577777777777777777777777776 34443 5777777777 777777777777763 344666777
Q ss_pred CCChHHHHHHhcCchhHHHHHHHhCCCChHHHhccCCChHHHHhhc
Q 009805 331 MGNTPLHILATLSARTCNEIVRQIGKGDTQAVNKKKISVKHIELYG 376 (525)
Q Consensus 331 ~G~T~Lh~A~~~~~~~~~~ll~~~~~~d~~~~n~~g~t~l~~a~~~ 376 (525)
.|.||||.++..... ..++..+..++++.+|..|+||||+|+..
T Consensus 155 ~~~~~l~~~~~~~~~--~~ll~~ga~~~~~~~d~~G~TpL~~A~~~ 198 (229)
T 2vge_A 155 GAVYALWDYSAEFGD--ELSFREGESVTVLRRDGPEETDWWWAALH 198 (229)
T ss_dssp GEEEESSCBCCSSTT--BCCBCTTCEEEEEESSCTTCSSEEEEEET
T ss_pred CchHHHHHHhhcccc--ccCccccccccccccCCCcccHHHHHHHc
Confidence 777777755444322 23344223333666677777777777644
No 70
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.95 E-value=1.1e-27 Score=205.62 Aligned_cols=150 Identities=25% Similarity=0.307 Sum_probs=113.6
Q ss_pred CcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCCCC
Q 009805 79 DSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFPYSANV 158 (525)
Q Consensus 79 ~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~ 158 (525)
.||||.|++.|+.+++++|++.+.+ ++ .+..|.||||+|+..|+.+++++|+++|++++ ..+.
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~---------------~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~ 65 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAP---------------FT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRD-ARTK 65 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCC---------------CC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTT-CCCT
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCC---------------CC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CCCC
Confidence 4677888888888888888777764 11 46677788888888888888888887777765 5666
Q ss_pred CCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCcccCCCCCCcHHHHHHHcC
Q 009805 159 NGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAVNSYAADVVEKLLAKKRHLTRERDDCGWTPLHHSAYLG 238 (525)
Q Consensus 159 ~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g 238 (525)
.|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|++.+++ ++.+|..|.||||+|+..|
T Consensus 66 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~ 144 (153)
T 1awc_B 66 VDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGAD-VHTQSKFCKTAFDISIDNG 144 (153)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCCHHHHHHHcC
Confidence 777888888877888888888877777777777777788877777777777777777776 4667777777777777777
Q ss_pred ChhHHHHH
Q 009805 239 LKDITALL 246 (525)
Q Consensus 239 ~~~~v~~L 246 (525)
+.+++++|
T Consensus 145 ~~~i~~~L 152 (153)
T 1awc_B 145 NEDLAEIL 152 (153)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHh
Confidence 77777765
No 71
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.95 E-value=1.8e-27 Score=207.77 Aligned_cols=159 Identities=29% Similarity=0.351 Sum_probs=117.4
Q ss_pred ccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHH
Q 009805 122 TNEEENTALHEAVQCGNLDAVKILMEAGPNFPYSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAV 201 (525)
Q Consensus 122 ~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~ 201 (525)
....+.++|+.|++.|+.+++++|+++|++++ ..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+
T Consensus 10 ~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 88 (169)
T 2y1l_E 10 HGSDLGKKLLEAARAGRDDEVRILMANGADVN-AEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAA 88 (169)
T ss_dssp ---CHHHHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CCCcccchHHHHHHcCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHH
Confidence 34556778888888888888888888887765 56777888888888888888888888888888888888888888888
Q ss_pred HcCCHHHHHHHHHhcCcCcccCCCCCCcHHHHHHHcCChhHHHHHhhcCCCcchhcccCCCCcHHHHHHhcCCHHHHHHH
Q 009805 202 NSYAADVVEKLLAKKRHLTRERDDCGWTPLHHSAYLGLKDITALLLEFDGSSALILDKDRKMTALLMAASQGHESLAGTI 281 (525)
Q Consensus 202 ~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~L 281 (525)
..++.+++++|++.+++ .+.+|..|.||||+|+..|+.+++++|+++|.+. ...+. .|.||||+|+..|+.+++++|
T Consensus 89 ~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~-~g~t~l~~A~~~~~~~~~~~L 165 (169)
T 2y1l_E 89 LFGHLEIVEVLLKNGAD-VNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADV-NAQDK-FGKTAFDISIDNGNEDLAEIL 165 (169)
T ss_dssp HTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT-TSCCHHHHHHHTTCHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCC-CCCCHHHHHHHhCCHHHHHHH
Confidence 88888888888887776 4666777777777777777777777777776665 33333 566777777777777777776
Q ss_pred Hhh
Q 009805 282 IAH 284 (525)
Q Consensus 282 l~~ 284 (525)
++.
T Consensus 166 ~~~ 168 (169)
T 2y1l_E 166 QKL 168 (169)
T ss_dssp HTC
T ss_pred HHc
Confidence 654
No 72
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.95 E-value=6.2e-28 Score=209.90 Aligned_cols=161 Identities=23% Similarity=0.245 Sum_probs=111.5
Q ss_pred cCCCCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCC
Q 009805 74 TNAKGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFP 153 (525)
Q Consensus 74 ~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~ 153 (525)
.|.+|.||||.|++.|+.++++.|++.+... ++..+..|.||||+|+..|+.+++++|+++|++++
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~--------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 69 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVN--------------CRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVH 69 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTT--------------CCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCC--------------ccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCC
Confidence 3556677777777777777777777654321 33456667777777777777777777777777765
Q ss_pred CCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCcccCCCCCCcHHHH
Q 009805 154 YSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAVNSYAADVVEKLLAKKRHLTRERDDCGWTPLHH 233 (525)
Q Consensus 154 ~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~ 233 (525)
..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|++.+.+ ++.+|..|.||||+
T Consensus 70 -~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~ 147 (165)
T 3twr_A 70 -AKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGAD-PTKKNRDGNTPLDL 147 (165)
T ss_dssp -CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCTGGG
T ss_pred -ccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCChhHh
Confidence 5566777777777777777777777777777777777777777777777777777777777766 46677777777777
Q ss_pred HHHcCChhHHHHHhhcCC
Q 009805 234 SAYLGLKDITALLLEFDG 251 (525)
Q Consensus 234 A~~~g~~~~v~~Ll~~~~ 251 (525)
|+. |+.+++++|+++|+
T Consensus 148 a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 148 VKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp SCT-TCHHHHHHHHTC--
T ss_pred Hhc-CChHHHHHHhhccc
Confidence 555 66777777776553
No 73
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.95 E-value=2.1e-27 Score=204.48 Aligned_cols=153 Identities=24% Similarity=0.261 Sum_probs=120.7
Q ss_pred CCcHHHHHHHcCChhHHHHHHHhhh-cCChhHhhhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCC
Q 009805 78 GDSPLHAAAKCGRPAVVKVLIEFAK-KQPTAMKCCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFPYSA 156 (525)
Q Consensus 78 g~tpLh~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~ 156 (525)
+.||||.|+..|+.++++.|++... + ++..|..|.||||+ +..|+.+++++|+++|++++ ..
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~---------------~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~-~~ 64 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVH---------------PDALNRFGKTALQV-MMFGSTAIALELLKQGASPN-VQ 64 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCC---------------TTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTT-CC
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcC---------------ccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCC-Cc
Confidence 4578888888888888888887721 2 45677788888888 78888888888888888765 56
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCcccCCCCCCcHHHHHHH
Q 009805 157 NVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAVNSYAADVVEKLLAKKRHLTRERDDCGWTPLHHSAY 236 (525)
Q Consensus 157 ~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~ 236 (525)
+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++. .+ .+.+|..|.||||+|+.
T Consensus 65 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~-~~~~~~~g~t~l~~A~~ 142 (156)
T 1bd8_A 65 DTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SD-LHRRDARGLTPLELALQ 142 (156)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SC-TTCCCTTSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cC-CCCcCCCCCCHHHHHHH
Confidence 77788888888888888888888888888888888888888888888888888888877 55 56777778888888888
Q ss_pred cCChhHHHHHhhc
Q 009805 237 LGLKDITALLLEF 249 (525)
Q Consensus 237 ~g~~~~v~~Ll~~ 249 (525)
.|+.+++++|+++
T Consensus 143 ~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 143 RGAQDLVDILQGH 155 (156)
T ss_dssp SCCHHHHHHHHTT
T ss_pred cCcHHHHHHHHhh
Confidence 8888888887763
No 74
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.95 E-value=4.3e-27 Score=201.78 Aligned_cols=151 Identities=27% Similarity=0.340 Sum_probs=117.2
Q ss_pred CChHhHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHcCC
Q 009805 126 ENTALHEAVQCGNLDAVKILMEAGPNFPYSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAVNSYA 205 (525)
Q Consensus 126 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~ 205 (525)
..|+||.|++.|+.+++++|+++|++.. .+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..++
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 79 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFT--TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGH 79 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCC--CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCC--cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCh
Confidence 3578888888888888888888888754 57778888888888888888888888888888888888888888888888
Q ss_pred HHHHHHHHHhcCcCcccCCCCCCcHHHHHHHcCChhHHHHHhhcCCCcchhcccCCCCcHHHHHHhcCCHHHHHHH
Q 009805 206 ADVVEKLLAKKRHLTRERDDCGWTPLHHSAYLGLKDITALLLEFDGSSALILDKDRKMTALLMAASQGHESLAGTI 281 (525)
Q Consensus 206 ~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~L 281 (525)
.+++++|++.+++ ++.+|..|.||||+|+..|+.+++++|+++|++. ...+. .|.||||+|+..|+.+++++|
T Consensus 80 ~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~-~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 80 ANIVEVLLKHGAD-VNAKDMLKMTALHWATEHNHQEVVELLIKYGADV-HTQSK-FCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT-TSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCC-CCCCHHHHHHHcCCHHHHHHh
Confidence 8888888888777 5667777777777777777777777777776665 33333 566777777777777766654
No 75
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=1.9e-27 Score=209.78 Aligned_cols=131 Identities=20% Similarity=0.222 Sum_probs=62.7
Q ss_pred CccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHH
Q 009805 121 LTNEEENTALHEAVQCGNLDAVKILMEAGPNFPYSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAA 200 (525)
Q Consensus 121 ~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A 200 (525)
.+|..|.||||+|+..|+.+++++|+++|++++ ..+..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|
T Consensus 34 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A 112 (179)
T 3f6q_A 34 QGDDHGFSPLHWACREGRSAVVEMLIMRGARIN-VMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYA 112 (179)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred ccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHH
Confidence 344444444444444444444444444444443 3344444444444444444444444444444444444444444444
Q ss_pred HHcCCHHHHHHHHHhcCcCcccCCCCCCcHHHHHHHcCChhHHHHHhhcCCCc
Q 009805 201 VNSYAADVVEKLLAKKRHLTRERDDCGWTPLHHSAYLGLKDITALLLEFDGSS 253 (525)
Q Consensus 201 ~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~ 253 (525)
+..++.+++++|++.+++ ++.+|..|.|||++|+..++.+++++|+++|.+.
T Consensus 113 ~~~~~~~~v~~Ll~~ga~-~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~ 164 (179)
T 3f6q_A 113 CFWGQDQVAEDLVANGAL-VSICNKYGEMPVDKAKAPLRELLRERAEKMGQNL 164 (179)
T ss_dssp HHTTCHHHHHHHHHTTCC-SSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCC
T ss_pred HHcCCHHHHHHHHHCCCC-cchhccCCCCcHHHHHHHHHHHHHHHHHHhhcCc
Confidence 444444444444444444 3444444444444444444444444444444443
No 76
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.95 E-value=1.9e-27 Score=206.88 Aligned_cols=161 Identities=23% Similarity=0.257 Sum_probs=128.2
Q ss_pred ccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHH
Q 009805 122 TNEEENTALHEAVQCGNLDAVKILMEAGPNFPYSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAV 201 (525)
Q Consensus 122 ~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~ 201 (525)
.|.+|.||||.|++.|+.++++.|++.++......+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 83 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNAC 83 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHH
Confidence 47778899999999999999999998765544567778899999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHhcCcCcccCCCCCCcHHHHHHHcCChhHHHHHhhcCCCcchhcccCCCCcHHHHHHhcCCHHHHHHH
Q 009805 202 NSYAADVVEKLLAKKRHLTRERDDCGWTPLHHSAYLGLKDITALLLEFDGSSALILDKDRKMTALLMAASQGHESLAGTI 281 (525)
Q Consensus 202 ~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~L 281 (525)
..++.+++++|++.+.+ ++.+|..|+||||+|+..|+.+++++|+++|.+. ...+. .|.||||+|+. |+.+++++|
T Consensus 84 ~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~-~g~t~l~~a~~-~~~~i~~~L 159 (165)
T 3twr_A 84 SYGHYEVAELLVKHGAV-VNVADLWKFTPLHEAAAKGKYEICKLLLQHGADP-TKKNR-DGNTPLDLVKD-GDTDIQDLL 159 (165)
T ss_dssp HTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT-TSCCTGGGSCT-TCHHHHHHH
T ss_pred HcCcHHHHHHHHhCCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-cccCC-CCCChhHhHhc-CChHHHHHH
Confidence 99999999999998887 5677777888888888877777777777777665 33444 57777777555 667777777
Q ss_pred HhhCC
Q 009805 282 IAHYP 286 (525)
Q Consensus 282 l~~~~ 286 (525)
+++++
T Consensus 160 ~~~gA 164 (165)
T 3twr_A 160 RGDAA 164 (165)
T ss_dssp HTC--
T ss_pred hhccc
Confidence 76653
No 77
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=6.4e-27 Score=206.40 Aligned_cols=161 Identities=20% Similarity=0.202 Sum_probs=133.3
Q ss_pred CCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHc
Q 009805 124 EEENTALHEAVQCGNLDAVKILMEAGPNFPYSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAVNS 203 (525)
Q Consensus 124 ~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~ 203 (525)
.++.++||.|+..|+.+++++|++.++......+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 82 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASH 82 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 35678899999999999999999986554457788899999999999999999999999999998889999999999999
Q ss_pred CCHHHHHHHHHhcCcCcccCCCCCCcHHHHHHHcCChhHHHHHhhcCCCcchhcccCCCCcHHHHHHhcCCHHHHHHHHh
Q 009805 204 YAADVVEKLLAKKRHLTRERDDCGWTPLHHSAYLGLKDITALLLEFDGSSALILDKDRKMTALLMAASQGHESLAGTIIA 283 (525)
Q Consensus 204 ~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~ 283 (525)
++.+++++|++.+++ ++.+|..|.||||+|+..|+.+++++|+++|++. ...+. .|.|||++|+..++.+++++|++
T Consensus 83 ~~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~-~g~tpl~~A~~~~~~~~~~~L~~ 159 (179)
T 3f6q_A 83 GHRDIVQKLLQYKAD-INAVNEHGNVPLHYACFWGQDQVAEDLVANGALV-SICNK-YGEMPVDKAKAPLRELLRERAEK 159 (179)
T ss_dssp TCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCS-SBCCT-TSCCGGGGSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCc-chhcc-CCCCcHHHHHHHHHHHHHHHHHH
Confidence 999999999998887 5778888888888888888888888888888776 44444 67888888888888888888888
Q ss_pred hCCC
Q 009805 284 HYPE 287 (525)
Q Consensus 284 ~~~~ 287 (525)
.+++
T Consensus 160 ~g~~ 163 (179)
T 3f6q_A 160 MGQN 163 (179)
T ss_dssp TTCC
T ss_pred hhcC
Confidence 8877
No 78
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.95 E-value=5.8e-27 Score=201.71 Aligned_cols=154 Identities=21% Similarity=0.281 Sum_probs=143.7
Q ss_pred CCchhhhhhhcccccccCCchhhHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhhh
Q 009805 34 KHTVLHVNIARQSLKNKEGESVSTKFVEQILEICPSLLIQTNAKGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAK 113 (525)
Q Consensus 34 g~t~Lh~A~~~~~~~~~~g~~~~~~~ll~~~~~~~~~l~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~ 113 (525)
+.|+||.|+.. |+.+++++|++ ..+.+++..|..|.||||+ +..|+.+++++|++.+.+
T Consensus 2 ~~~~L~~A~~~-------g~~~~v~~ll~---~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~---------- 60 (156)
T 1bd8_A 2 AGDRLSGAAAR-------GDVQEVRRLLH---RELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGAS---------- 60 (156)
T ss_dssp HHHHHHHHHHH-------TCHHHHHHHHH---TTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCC----------
T ss_pred cchHHHHHHHh-------CCHHHHHHHHH---hhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCC----------
Confidence 46899999999 99999999966 3555788899999999999 999999999999999987
Q ss_pred hhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCC
Q 009805 114 TAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFPYSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNG 193 (525)
Q Consensus 114 ~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g 193 (525)
++.+|..|.||||+|+..|+.+++++|+++|++++ ..|..|.||||+|+..|+.+++++|+++ ++++.+|..|
T Consensus 61 -----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g 133 (156)
T 1bd8_A 61 -----PNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVN-VPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARG 133 (156)
T ss_dssp -----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSC-CCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTS
T ss_pred -----CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCC-CcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCC
Confidence 66789999999999999999999999999999976 6788999999999999999999999999 9999999999
Q ss_pred CcHHHHHHHcCCHHHHHHHHHh
Q 009805 194 KTALHAAVNSYAADVVEKLLAK 215 (525)
Q Consensus 194 ~t~L~~A~~~~~~~~~~~Ll~~ 215 (525)
.||||+|+..++.+++++|+++
T Consensus 134 ~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 134 LTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp CCHHHHHHHSCCHHHHHHHHTT
T ss_pred CCHHHHHHHcCcHHHHHHHHhh
Confidence 9999999999999999999874
No 79
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.94 E-value=2.1e-27 Score=219.72 Aligned_cols=181 Identities=18% Similarity=0.163 Sum_probs=122.5
Q ss_pred cCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHH
Q 009805 123 NEEENTALHEAVQCGNLDAVKILMEAGPNFPYSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAVN 202 (525)
Q Consensus 123 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~ 202 (525)
+..|.||||.|++.|+.++++.|+++|.+++. +..|.||||.|+..|+.+++++|+++|++++.+|..|.||||+|+.
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~--~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~ 79 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMRVKF--NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVC 79 (239)
T ss_dssp -------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHH
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCCccc--CchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 35689999999999999999999999998763 4678999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHhcCcCcccCCCCCCcHHHHHHHcCChhHHHHHhhcCCCcchhcccCCCCcHHHHH--HhcCCHHHHHH
Q 009805 203 SYAADVVEKLLAKKRHLTRERDDCGWTPLHHSAYLGLKDITALLLEFDGSSALILDKDRKMTALLMA--ASQGHESLAGT 280 (525)
Q Consensus 203 ~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpL~~A--~~~g~~~~v~~ 280 (525)
.|+.+++++|++.+++ ++.+|..|+||||+|+..|+.+++++|+++|++. ...+...+.||||+| +..|+.+++++
T Consensus 80 ~g~~~~v~~Ll~~ga~-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~~~~t~l~~a~~~~~g~~~~~~~ 157 (239)
T 1ycs_B 80 AGHTEIVKFLVQFGVN-VNAADSDGWTPLHCAASCNNVQVCKFLVESGAAV-FAMTYSDMQTAADKCEEMEEGYTQCSQF 157 (239)
T ss_dssp HTCHHHHHHHHHHTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCSSSCCCHHHHCCSSSTTCCCHHHH
T ss_pred cCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-ceecCCCCcchHHHHHHhhhccHHHHHH
Confidence 9999999999999988 6888999999999999999999999999999887 444442455999998 78889999999
Q ss_pred HHhhCCCccccc---------cCCCCchhHHHHhcCC
Q 009805 281 IIAHYPECYDLV---------DNGGWNVLHFLMVSLH 308 (525)
Q Consensus 281 Ll~~~~~~~~~~---------d~~g~t~Lh~A~~~~~ 308 (525)
|++.+++ .+.. |..+++++++++..|.
T Consensus 158 Ll~~~a~-~~~~~~~~~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 158 LYGVQEK-MGIMNKGVIYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp HHHHHHH-TTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred HHHhhhc-ccccccceEEEEeccCCCCCCcccccCCC
Confidence 9998876 3333 4445555555555554
No 80
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.94 E-value=2.2e-27 Score=219.69 Aligned_cols=182 Identities=14% Similarity=0.122 Sum_probs=130.5
Q ss_pred CCCCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCC
Q 009805 75 NAKGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFPY 154 (525)
Q Consensus 75 ~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~ 154 (525)
+..|.||||.|++.|+.+.++.|++.+.+. +. +..|.||||.|+..|+.+++++|++.|++++
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~~---------------~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~- 64 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMRV---------------KF-NPLPLALLLDSSLEGEFDLVQRIIYEVDDPS- 64 (239)
T ss_dssp ---------------------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCC-
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCCc---------------cc-CchhhHHHHHHHHcCCHHHHHHHHHcCCCCC-
Confidence 356999999999999999999999999873 32 4678999999999999999999999999876
Q ss_pred CCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCcccCCCCCC-cHHHH
Q 009805 155 SANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAVNSYAADVVEKLLAKKRHLTRERDDCGW-TPLHH 233 (525)
Q Consensus 155 ~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~-tpL~~ 233 (525)
..|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++++++ .+.++..|. ||||+
T Consensus 65 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~~~~t~l~~ 143 (239)
T 1ycs_B 65 LPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAA-VFAMTYSDMQTAADK 143 (239)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCSSSCCCHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-cceecCCCCcchHHH
Confidence 6788999999999999999999999999999999999999999999999999999999999999 466666665 99999
Q ss_pred H--HHcCChhHHHHHhhcCCCcchhcc-------cCCCCcHHHHHHhcCC
Q 009805 234 S--AYLGLKDITALLLEFDGSSALILD-------KDRKMTALLMAASQGH 274 (525)
Q Consensus 234 A--~~~g~~~~v~~Ll~~~~~~~~~~~-------~~~g~tpL~~A~~~g~ 274 (525)
| +..|+.+++++|++++++...... ...+.++++++...|.
T Consensus 144 a~~~~~g~~~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 144 CEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp CCSSSTTCCCHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred HHHhhhccHHHHHHHHHhhhcccccccceEEEEeccCCCCCCcccccCCC
Confidence 9 788999999999998876532211 2357788888877775
No 81
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.93 E-value=1.6e-25 Score=187.85 Aligned_cols=133 Identities=17% Similarity=0.138 Sum_probs=103.3
Q ss_pred ccccccCCCCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhc
Q 009805 69 SLLIQTNAKGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEA 148 (525)
Q Consensus 69 ~~l~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~ 148 (525)
..++..+..|.||||+|+..|+.+++++|++.+.+ ++.+|..|.||||+|+. |+.+++++|+++
T Consensus 3 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---------------~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~ 66 (136)
T 1d9s_A 3 PGIHMLGGSSDAGLATAAARGQVETVRQLLEAGAD---------------PNALNRFGRRPIQVMMM-GSAQVAELLLLH 66 (136)
T ss_dssp CCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCC---------------TTCCCTTCCTTTTTSTT-SCHHHHHHHHHH
T ss_pred CCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCC---------------cCCcCCCCCCHHHHHHc-CCHHHHHHHHHC
Confidence 45566777888888888888888888888887766 55677778888888888 888888888888
Q ss_pred CCCCCCCCCCC-CchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhcCc
Q 009805 149 GPNFPYSANVN-GETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAVNSYAADVVEKLLAKKRH 218 (525)
Q Consensus 149 ~~~~~~~~~~~-g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~ 218 (525)
|++++ ..+.. |.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|+++|++
T Consensus 67 g~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 67 GAEPN-CADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp TCCSS-CCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 87766 45556 78888888888888888888888888877777888888888888888888888777653
No 82
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.92 E-value=3.4e-25 Score=190.55 Aligned_cols=143 Identities=18% Similarity=0.141 Sum_probs=96.8
Q ss_pred ccCCCCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCC
Q 009805 73 QTNAKGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPNF 152 (525)
Q Consensus 73 ~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~ 152 (525)
..+..|.||||+|++.|+.++|++|++.+.+ ++.+|..|.||||+|+ .|+.+++++|+++|+++
T Consensus 7 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~---------------~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~ 70 (156)
T 1bi7_B 7 SSMEPSADWLATAAARGRVEEVRALLEAGAN---------------PNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEP 70 (156)
T ss_dssp ---CCSTTHHHHHHHHTCHHHHHHHHTTTCC---------------TTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCC
T ss_pred CCCccchHHHHHHHHcCCHHHHHHHHHcCCC---------------CCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCC
Confidence 4566777888888888888888888877765 5567777888888774 77888888888887776
Q ss_pred CCCCCCCCch-HHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCcccCCCCCCcHH
Q 009805 153 PYSANVNGET-PLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAVNSYAADVVEKLLAKKRHLTRERDDCGWTPL 231 (525)
Q Consensus 153 ~~~~~~~g~t-pL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL 231 (525)
+ ..+..|.| |||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|++++++ ++.++..|.||.
T Consensus 71 ~-~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~~ 148 (156)
T 1bi7_B 71 N-CADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGG-TRGSNHARIDAA 148 (156)
T ss_dssp C-CCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC---------------
T ss_pred C-CcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCC-CCccCcCcCccc
Confidence 5 56667777 88888888888888888888888777777788888888888888888888877777 566777777776
Q ss_pred HH
Q 009805 232 HH 233 (525)
Q Consensus 232 ~~ 233 (525)
+.
T Consensus 149 ~~ 150 (156)
T 1bi7_B 149 EG 150 (156)
T ss_dssp --
T ss_pred cc
Confidence 53
No 83
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.92 E-value=7.3e-25 Score=183.77 Aligned_cols=131 Identities=21% Similarity=0.272 Sum_probs=114.1
Q ss_pred hcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCC-CCcHH
Q 009805 119 LGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFPYSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPN-GKTAL 197 (525)
Q Consensus 119 l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~-g~t~L 197 (525)
++..|..|.||||+|+..|+.+++++|+++|++++ ..+..|.||||+|+. |+.+++++|+++|++++.+|.. |.|||
T Consensus 5 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L 82 (136)
T 1d9s_A 5 IHMLGGSSDAGLATAAARGQVETVRQLLEAGADPN-ALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPV 82 (136)
T ss_dssp CSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHH
T ss_pred ccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcC-CcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHH
Confidence 56778889999999999999999999999988876 667889999999999 9999999999999998888888 89999
Q ss_pred HHHHHcCCHHHHHHHHHhcCcCcccCCCCCCcHHHHHHHcCChhHHHHHhhcCCC
Q 009805 198 HAAVNSYAADVVEKLLAKKRHLTRERDDCGWTPLHHSAYLGLKDITALLLEFDGS 252 (525)
Q Consensus 198 ~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ 252 (525)
|+|+..++.+++++|++.+++ ++.+|..|.||||+|+..++.+++++|+++|++
T Consensus 83 ~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 83 HDAAREGFLDTLVVLHRAGAR-LDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHHHHTCHHHHHHHHHTCCC-CCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred HHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999999999999988887 577888888888888888888888888887753
No 84
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.91 E-value=4.1e-25 Score=195.19 Aligned_cols=154 Identities=15% Similarity=0.112 Sum_probs=115.5
Q ss_pred CCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcCcc-CCCChHhHHHHHcCCH----HHHHHHHhcCCCC
Q 009805 78 GDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLTN-EEENTALHEAVQCGNL----DAVKILMEAGPNF 152 (525)
Q Consensus 78 g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~~-~~g~t~Lh~A~~~g~~----~~v~~Ll~~~~~~ 152 (525)
+.++|+.|++.|+.+.++.+++.+.. .++ ..|.||||+|+..|+. +++++|+++|+++
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~-----------------~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadv 68 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYE-----------------DKESVLKSNILYDVLRNNNDEARYKISMFLINKGADI 68 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSS-----------------CHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCS
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCcc-----------------cccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCC
Confidence 35678888888888888887776532 223 5688888888888864 4788888888887
Q ss_pred CCCCCCCCchHHHHHHHcCC------HHHHHHHHHhcCCCCCCCCCCC-cHHHHHHHcC-----CHHHHHHHHH-hcCcC
Q 009805 153 PYSANVNGETPLYMAAARGS------KKMVAEILEKCSSAAHDGPNGK-TALHAAVNSY-----AADVVEKLLA-KKRHL 219 (525)
Q Consensus 153 ~~~~~~~g~tpL~~A~~~g~------~~~v~~Ll~~~~~~~~~~~~g~-t~L~~A~~~~-----~~~~~~~Ll~-~~~~~ 219 (525)
+ ..+..|+||||+|+..|+ .+++++|+++|++++.+|..|. ||||+|+..+ +.+++++|++ .+++
T Consensus 69 n-~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad- 146 (186)
T 3t8k_A 69 K-SRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQ- 146 (186)
T ss_dssp S-CCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCC-
T ss_pred C-CCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCC-
Confidence 6 567788888888888776 5678888888888888888888 8888888743 3457777777 7776
Q ss_pred cccCCCCCCcHHHHHHHcCChhHHHHHhhcC
Q 009805 220 TRERDDCGWTPLHHSAYLGLKDITALLLEFD 250 (525)
Q Consensus 220 ~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~ 250 (525)
++.+|..|.||||+|+..|+.+++++|.++.
T Consensus 147 ~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~ 177 (186)
T 3t8k_A 147 LLIKDKWGLTALEFVKRCQKPIALKMMEDYI 177 (186)
T ss_dssp TTCCCTTSCCHHHHHHTTTCHHHHHHHHHHH
T ss_pred CcccCCCCCCHHHHHHHcCCHHHHHHHHHHH
Confidence 5777777888888888777777777777643
No 85
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.91 E-value=1.5e-23 Score=173.03 Aligned_cols=126 Identities=36% Similarity=0.530 Sum_probs=93.4
Q ss_pred CCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCC
Q 009805 77 KGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFPYSA 156 (525)
Q Consensus 77 ~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~ 156 (525)
+|.||||.|++.|+.+++++|++.+.+ ++..|..|.||||+|+..|+.+++++|+++|++++ ..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~---------------~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~ 64 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD---------------VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN-AK 64 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCC---------------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CC
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCC---------------CCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCc-cc
Confidence 467777777777777777777777665 45567777777777777777777777777777765 55
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhcCc
Q 009805 157 NVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAVNSYAADVVEKLLAKKRH 218 (525)
Q Consensus 157 ~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~ 218 (525)
+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..++.+++++|+++|++
T Consensus 65 ~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 65 DKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred CCCCCcHHHHHHHcChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 66777777777777777777777777777777777777777777777777777777777653
No 86
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.91 E-value=2.6e-24 Score=185.01 Aligned_cols=143 Identities=23% Similarity=0.287 Sum_probs=108.7
Q ss_pred cCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCc-HHH
Q 009805 120 GLTNEEENTALHEAVQCGNLDAVKILMEAGPNFPYSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKT-ALH 198 (525)
Q Consensus 120 ~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t-~L~ 198 (525)
...+..|.||||+|+..|+.+++++|+++|++++ ..+..|.||||+|+ .|+.+++++|+++|++++.++..|.| |||
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~ 83 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGANPN-APNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVH 83 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTT-CCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHH
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHH
Confidence 3467788999999999999999999999988876 66778999999885 88999999999999999988888988 999
Q ss_pred HHHHcCCHHHHHHHHHhcCcCcccCCCCCCcHHHHHHHcCChhHHHHHhhcCCCcchhcccCCCCcHHH
Q 009805 199 AAVNSYAADVVEKLLAKKRHLTRERDDCGWTPLHHSAYLGLKDITALLLEFDGSSALILDKDRKMTALL 267 (525)
Q Consensus 199 ~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpL~ 267 (525)
+|+..|+.+++++|++++++ ++.+|..|.||||+|+..|+.+++++|+++|++. ...+. .|.||.+
T Consensus 84 ~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~-~~~~~-~g~t~~~ 149 (156)
T 1bi7_B 84 DAAREGFLDTLVVLHRAGAR-LDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGT-RGSNH-ARIDAAE 149 (156)
T ss_dssp HHHHHTCHHHHHHHHHHTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----------------
T ss_pred HHHHCCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCC-CccCc-CcCcccc
Confidence 99999999999999998887 5778888888888888888888888888888776 33333 5666655
No 87
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.91 E-value=5.1e-25 Score=194.56 Aligned_cols=157 Identities=11% Similarity=0.001 Sum_probs=138.0
Q ss_pred CCCchhhhhhhcccccccCCchhhHHHHHHHHHhCCccccccC-CCCCcHHHHHHHcCCh----hHHHHHHHhhhcCChh
Q 009805 33 NKHTVLHVNIARQSLKNKEGESVSTKFVEQILEICPSLLIQTN-AKGDSPLHAAAKCGRP----AVVKVLIEFAKKQPTA 107 (525)
Q Consensus 33 ~g~t~Lh~A~~~~~~~~~~g~~~~~~~ll~~~~~~~~~l~~~~-~~g~tpLh~A~~~g~~----~~v~~Ll~~~~~~~~~ 107 (525)
+++++||.|++. |+.+.++.+++ ... +.++ ..|.||||+|+..|+. +++++|++.|++
T Consensus 5 ~~~~~l~~Aa~~-------g~~~~~~~l~~---~~~---~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gad---- 67 (186)
T 3t8k_A 5 SEYRTVSAAAML-------GTYEDFLELFE---KGY---EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGAD---- 67 (186)
T ss_dssp HHCSSHHHHHHH-------SCHHHHHHHHH---HSS---SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCC----
T ss_pred ccccHHHHHHHc-------CCHHHHHHHHh---cCc---ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCC----
Confidence 357899999999 99999888855 332 3344 7799999999999975 599999999998
Q ss_pred HhhhhhhhHHHhcCccCCCChHhHHHHHcCC------HHHHHHHHhcCCCCCCCCCCCCc-hHHHHHHHcC-----CHHH
Q 009805 108 MKCCAKTAWQMLGLTNEEENTALHEAVQCGN------LDAVKILMEAGPNFPYSANVNGE-TPLYMAAARG-----SKKM 175 (525)
Q Consensus 108 ~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~------~~~v~~Ll~~~~~~~~~~~~~g~-tpL~~A~~~g-----~~~~ 175 (525)
++.+|..|.||||+|+..|+ .+++++|+++|++++ ..|..|. ||||+|+..+ +.++
T Consensus 68 -----------vn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin-~~d~~g~ttpLh~A~~~~~~~~~~~~i 135 (186)
T 3t8k_A 68 -----------IKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADIT-ALYKPYKIVVFKNIFNYFVDENEMIPL 135 (186)
T ss_dssp -----------SSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSS-SCBGGGTBCTTGGGGGCCSCHHHHHHH
T ss_pred -----------CCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCC-ccCCCcCchHHHHHHHcCCChhhHHHH
Confidence 77899999999999999987 689999999999987 7788999 9999999954 4569
Q ss_pred HHHHHH-hcCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhcCc
Q 009805 176 VAEILE-KCSSAAHDGPNGKTALHAAVNSYAADVVEKLLAKKRH 218 (525)
Q Consensus 176 v~~Ll~-~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~ 218 (525)
+++|++ +|++++.+|..|.||||+|++.++.+++++|.+....
T Consensus 136 v~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~ 179 (186)
T 3t8k_A 136 YKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKK 179 (186)
T ss_dssp HHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHHHHH
Confidence 999999 9999999999999999999999999999999987544
No 88
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.91 E-value=1.1e-23 Score=176.61 Aligned_cols=123 Identities=24% Similarity=0.324 Sum_probs=65.3
Q ss_pred CCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCC
Q 009805 77 KGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFPYSA 156 (525)
Q Consensus 77 ~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~ 156 (525)
.+.||||.|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+.+++++|+++|++++ ..
T Consensus 13 ~~~t~l~~A~~~g~~~~v~~Ll~~g~~---------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~ 76 (136)
T 2jab_A 13 DLGKKLLEAARAGQDDEVRILMANGAD---------------VNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVN-AV 76 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHTTCC---------------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CC
T ss_pred cccHHHHHHHHhCCHHHHHHHHHcCCC---------------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-cC
Confidence 345555555555555555555555444 33445555555555555555555555555555543 34
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHh
Q 009805 157 NVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAVNSYAADVVEKLLAK 215 (525)
Q Consensus 157 ~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~ 215 (525)
|..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..++.+++++|++.
T Consensus 77 d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ 135 (136)
T 2jab_A 77 DAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKL 135 (136)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHc
Confidence 44555555555555555555555555555555555555555555555555555555543
No 89
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.90 E-value=2.2e-23 Score=174.76 Aligned_cols=127 Identities=28% Similarity=0.374 Sum_probs=110.5
Q ss_pred ccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHH
Q 009805 122 TNEEENTALHEAVQCGNLDAVKILMEAGPNFPYSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAV 201 (525)
Q Consensus 122 ~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~ 201 (525)
....+.||||+|+..|+.+++++|+++|++++ ..|..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~ 88 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGADVN-AKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAA 88 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHH
Confidence 35567899999999999999999999998876 67788999999999999999999999999999988999999999999
Q ss_pred HcCCHHHHHHHHHhcCcCcccCCCCCCcHHHHHHHcCChhHHHHHhhcC
Q 009805 202 NSYAADVVEKLLAKKRHLTRERDDCGWTPLHHSAYLGLKDITALLLEFD 250 (525)
Q Consensus 202 ~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~ 250 (525)
..++.+++++|++.+++ .+.+|..|.||||+|+..|+.+++++|+++|
T Consensus 89 ~~~~~~~v~~Ll~~g~~-~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 89 FIGHLEIAEVLLKHGAD-VNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HcCCHHHHHHHHHcCCC-CcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 99999999999998887 5778888999999999999999999888764
No 90
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.90 E-value=7.8e-25 Score=202.96 Aligned_cols=169 Identities=21% Similarity=0.224 Sum_probs=125.8
Q ss_pred CCCchhhhhhhcccccccCCchhhHHHHHHHHHhCCccccccCCCCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhh
Q 009805 33 NKHTVLHVNIARQSLKNKEGESVSTKFVEQILEICPSLLIQTNAKGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCA 112 (525)
Q Consensus 33 ~g~t~Lh~A~~~~~~~~~~g~~~~~~~ll~~~~~~~~~l~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~ 112 (525)
.+.+++.+++.. |+.+.+..+.. .....+..|.||||+|++.|+.++++.|++ +.+
T Consensus 14 ~~~~~~l~~~~~-------g~~~~~~~~~~-------~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~--------- 69 (244)
T 3ui2_A 14 EGAMEYLIEWKD-------GHSPSWVPSSY-------IAADVVSEYETPWWTAARKADEQALSQLLE-DRD--------- 69 (244)
T ss_dssp TTEEEEEEEESS-------CCCCEEEEGGG-------SCHHHHHHHHHHHHHHHTTTCHHHHHHTTT-TCC---------
T ss_pred CCccHHHHHHHc-------CCCcccccccc-------cccccccCCCCHHHHHHHcCCHHHHHHHHc-CCC---------
Confidence 456667776666 66665433311 112234567888888888888888888888 655
Q ss_pred hhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCC
Q 009805 113 KTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFPYSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPN 192 (525)
Q Consensus 113 ~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~ 192 (525)
++.+|..|.||||+|+..|+.+++++|+++|++++...+..|.||||+|+..|+.+++++|+++|++++.+|..
T Consensus 70 ------~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~ 143 (244)
T 3ui2_A 70 ------VDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDER 143 (244)
T ss_dssp ------TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred ------CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC
Confidence 56678888888888888888888888888888877544477888888888888888888888888888888888
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhcCcCcccCCCCCCcHHHHHHHcCChhHHHHHhhc
Q 009805 193 GKTALHAAVNSYAADVVEKLLAKKRHLTRERDDCGWTPLHHSAYLGLKDITALLLEF 249 (525)
Q Consensus 193 g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ 249 (525)
|.||||+|+..+ ....+.||||+|+..|+.+++++|+++
T Consensus 144 g~t~l~~A~~~~------------------~~~~~~~~l~~a~~~g~~~iv~~L~~~ 182 (244)
T 3ui2_A 144 GLTALELAREIL------------------KTTPKGNPMQFGRRIGLEKVINVLEGQ 182 (244)
T ss_dssp CCCHHHHHHHHH------------------TTCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHH------------------hccCCCCHHHHHHHcChHHHHHHHHHh
Confidence 888888887521 113466777777777777777777764
No 91
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.90 E-value=4.4e-23 Score=170.23 Aligned_cols=126 Identities=36% Similarity=0.505 Sum_probs=104.3
Q ss_pred CCChHhHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHcC
Q 009805 125 EENTALHEAVQCGNLDAVKILMEAGPNFPYSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAVNSY 204 (525)
Q Consensus 125 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~ 204 (525)
+|.||||+|+..|+.+++++|+++|++++ ..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~ 79 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVN-AKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 79 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCC-CcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcC
Confidence 47888888888888888888888888765 56778888888888888888888888888888888888888888888888
Q ss_pred CHHHHHHHHHhcCcCcccCCCCCCcHHHHHHHcCChhHHHHHhhcCCC
Q 009805 205 AADVVEKLLAKKRHLTRERDDCGWTPLHHSAYLGLKDITALLLEFDGS 252 (525)
Q Consensus 205 ~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ 252 (525)
+.+++++|++.+++ .+.+|..|.||||+|+..|+.+++++|+++|++
T Consensus 80 ~~~~~~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 80 HLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp CHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred hHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 88888888888877 567777888888888888888888888877753
No 92
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.89 E-value=1.2e-23 Score=186.05 Aligned_cols=141 Identities=23% Similarity=0.271 Sum_probs=120.2
Q ss_pred CCCCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCC
Q 009805 75 NAKGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFPY 154 (525)
Q Consensus 75 ~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~ 154 (525)
+..|.||||.|++.|+.++++.|++ +.+ ++.+|..|.||||+|+..|+.+++++|+++|++++.
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~---------------~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 104 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRD---------------VDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDH 104 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSC---------------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCC---------------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc
Confidence 4567899999999999999999999 665 667889999999999999999999999999999875
Q ss_pred CCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCcccCCCCCCcHHHHH
Q 009805 155 SANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAVNSYAADVVEKLLAKKRHLTRERDDCGWTPLHHS 234 (525)
Q Consensus 155 ~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A 234 (525)
..+..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|++.++. ..+.+||++|
T Consensus 105 ~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~------------------~~~~~~l~~a 166 (183)
T 3deo_A 105 RDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKT------------------TPKGNPMQFG 166 (183)
T ss_dssp CCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT------------------CCCCSHHHHH
T ss_pred CCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC------------------cccccHHHHH
Confidence 5558899999999999999999999999999999999999999999864211 2367888888
Q ss_pred HHcCChhHHHHHhhc
Q 009805 235 AYLGLKDITALLLEF 249 (525)
Q Consensus 235 ~~~g~~~~v~~Ll~~ 249 (525)
+..|+.+++++|.++
T Consensus 167 ~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 167 RRIGLEKVINVLEGQ 181 (183)
T ss_dssp HHHHHHHHHHHHHTC
T ss_pred HHcCHHHHHHHHHHh
Confidence 888888888888764
No 93
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.89 E-value=1.5e-24 Score=201.06 Aligned_cols=171 Identities=23% Similarity=0.212 Sum_probs=142.6
Q ss_pred CCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCC
Q 009805 77 KGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFPYSA 156 (525)
Q Consensus 77 ~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~ 156 (525)
.+.+++.+++..|+.+.+..+...+.+ .+..|.||||+|++.|+.++++.|++ |.+++ ..
T Consensus 14 ~~~~~~l~~~~~g~~~~~~~~~~~~~~------------------~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~-~~ 73 (244)
T 3ui2_A 14 EGAMEYLIEWKDGHSPSWVPSSYIAAD------------------VVSEYETPWWTAARKADEQALSQLLE-DRDVD-AV 73 (244)
T ss_dssp TTEEEEEEEESSCCCCEEEEGGGSCHH------------------HHHHHHHHHHHHHTTTCHHHHHHTTT-TCCTT-CB
T ss_pred CCccHHHHHHHcCCCcccccccccccc------------------cccCCCCHHHHHHHcCCHHHHHHHHc-CCCCC-Cc
Confidence 445556666666666555443333222 34578999999999999999999999 88876 67
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCC-CCCCcHHHHHHHcCCHHHHHHHHHhcCcCcccCCCCCCcHHHHHH
Q 009805 157 NVNGETPLYMAAARGSKKMVAEILEKCSSAAHDG-PNGKTALHAAVNSYAADVVEKLLAKKRHLTRERDDCGWTPLHHSA 235 (525)
Q Consensus 157 ~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A~ 235 (525)
|..|.||||+|+..|+.+++++|+++|++++.++ ..|.||||+|+..|+.+++++|++.+++ ++.+|..|.||||+|+
T Consensus 74 d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~t~l~~A~ 152 (244)
T 3ui2_A 74 DENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGAD-IEVEDERGLTALELAR 152 (244)
T ss_dssp CTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHH
T ss_pred CCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCcHHHHHH
Confidence 8899999999999999999999999999999988 8899999999999999999999999998 6889999999999998
Q ss_pred HcCChhHHHHHhhcCCCcchhcccCCCCcHHHHHHhcCCHHHHHHHHhhCCC
Q 009805 236 YLGLKDITALLLEFDGSSALILDKDRKMTALLMAASQGHESLAGTIIAHYPE 287 (525)
Q Consensus 236 ~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ 287 (525)
..+.. ..+.+|||+|+..|+.+++++|+++..+
T Consensus 153 ~~~~~-------------------~~~~~~l~~a~~~g~~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 153 EILKT-------------------TPKGNPMQFGRRIGLEKVINVLEGQVFE 185 (244)
T ss_dssp HHHTT-------------------CCCSSHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred HHHhc-------------------cCCCCHHHHHHHcChHHHHHHHHHhccc
Confidence 63321 2578999999999999999999987543
No 94
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.89 E-value=1.7e-23 Score=175.63 Aligned_cols=125 Identities=22% Similarity=0.253 Sum_probs=68.7
Q ss_pred cCCCCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCC
Q 009805 74 TNAKGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFP 153 (525)
Q Consensus 74 ~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~ 153 (525)
+|.+|.||||+|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+.+++++|+++|++++
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~---------------~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~ 70 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVEYLLQNGSD---------------PNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVN 70 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCC---------------SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---------------CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCccc
Confidence 455555555555555555555555555544 34455555555555555555555555555555544
Q ss_pred CCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHH
Q 009805 154 YSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAVNSYAADVVEKLLA 214 (525)
Q Consensus 154 ~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~ 214 (525)
..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..+..+++++|.+
T Consensus 71 -~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~ 130 (137)
T 3c5r_A 71 -TTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEK 130 (137)
T ss_dssp -CCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC--
T ss_pred -CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhccc
Confidence 445555555555555555555555555555555555555555555555555555444443
No 95
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.88 E-value=1.1e-22 Score=179.73 Aligned_cols=140 Identities=24% Similarity=0.268 Sum_probs=127.6
Q ss_pred cCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCC-CCCCcHHHHHH
Q 009805 123 NEEENTALHEAVQCGNLDAVKILMEAGPNFPYSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDG-PNGKTALHAAV 201 (525)
Q Consensus 123 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~g~t~L~~A~ 201 (525)
+..|.||||+|+..|+.++++.|++ |.+++ ..|..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||+|+
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~-~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~ 118 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVD-AVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAA 118 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHH
Confidence 5678999999999999999999999 88876 678899999999999999999999999999999988 88999999999
Q ss_pred HcCCHHHHHHHHHhcCcCcccCCCCCCcHHHHHHHcCChhHHHHHhhcCCCcchhcccCCCCcHHHHHHhcCCHHHHHHH
Q 009805 202 NSYAADVVEKLLAKKRHLTRERDDCGWTPLHHSAYLGLKDITALLLEFDGSSALILDKDRKMTALLMAASQGHESLAGTI 281 (525)
Q Consensus 202 ~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~L 281 (525)
..|+.+++++|++.+++ ++.+|..|.||||+|+..++. ..+.+||++|+..|+.++++.|
T Consensus 119 ~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~-------------------~~~~~~l~~a~~~~~~~i~~~L 178 (183)
T 3deo_A 119 GYVRPEVVEALVELGAD-IEVEDERGLTALELAREILKT-------------------TPKGNPMQFGRRIGLEKVINVL 178 (183)
T ss_dssp HTTCHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHHHHT-------------------CCCCSHHHHHHHHHHHHHHHHH
T ss_pred hcCcHHHHHHHHHcCCC-CcCCCCCCCCHHHHHHHhccC-------------------cccccHHHHHHHcCHHHHHHHH
Confidence 99999999999999988 688999999999999975432 1467999999999999999999
Q ss_pred Hhh
Q 009805 282 IAH 284 (525)
Q Consensus 282 l~~ 284 (525)
.++
T Consensus 179 ~~~ 181 (183)
T 3deo_A 179 EGQ 181 (183)
T ss_dssp HTC
T ss_pred HHh
Confidence 765
No 96
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.88 E-value=6.2e-23 Score=172.20 Aligned_cols=129 Identities=24% Similarity=0.298 Sum_probs=111.9
Q ss_pred CccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHH
Q 009805 121 LTNEEENTALHEAVQCGNLDAVKILMEAGPNFPYSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAA 200 (525)
Q Consensus 121 ~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A 200 (525)
.+|..|.||||+|+..|+.+++++|+++|++++ ..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A 83 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPN-VKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDA 83 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSC-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHH
Confidence 468889999999999999999999999998876 6788899999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHhcCcCcccCCCCCCcHHHHHHHcCChhHHHHHhhcCC
Q 009805 201 VNSYAADVVEKLLAKKRHLTRERDDCGWTPLHHSAYLGLKDITALLLEFDG 251 (525)
Q Consensus 201 ~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~ 251 (525)
+..++.+++++|++.+++ .+.+|..|.||||+|+..+..+++++|.+.+.
T Consensus 84 ~~~~~~~~v~~Ll~~ga~-~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 84 AKNGHVDIVKLLLSYGAS-RNAVNIFGLRPVDYTDDESMKSLLLLPEKNES 133 (137)
T ss_dssp HHTTCHHHHHHHHHTTCC-TTCCCTTSCCGGGGCCCHHHHHHHSCC-----
T ss_pred HHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHhhccHHHHHhhcccccc
Confidence 999999999999999888 57888999999999988888888877766543
No 97
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.87 E-value=5.5e-22 Score=189.23 Aligned_cols=146 Identities=18% Similarity=0.120 Sum_probs=120.8
Q ss_pred CCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcCccCCCChHhHHHHHc---CCHHHHHHHHhcCCCCC
Q 009805 77 KGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLTNEEENTALHEAVQC---GNLDAVKILMEAGPNFP 153 (525)
Q Consensus 77 ~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~---g~~~~v~~Ll~~~~~~~ 153 (525)
...++||.|+..|+.+.++.|++.+.+...... -...+..|.||||+|+.. |+.+++++|+++|++++
T Consensus 150 ~~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~---------~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn 220 (301)
T 2b0o_E 150 PEPQRLWTAICNRDLLSVLEAFANGQDFGQPLP---------GPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLD 220 (301)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEE---------CSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTT
T ss_pred chHHHHhhhhhccCHHHHHHHHhcCCcccccCC---------CcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCC
Confidence 355789999999999999999999887321000 001588999999999997 89999999999999987
Q ss_pred CCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCcccCCCCCCcHHHH
Q 009805 154 YSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAVNSYAADVVEKLLAKKRHLTRERDDCGWTPLHH 233 (525)
Q Consensus 154 ~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~ 233 (525)
..|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|++.+++ .|.||||+
T Consensus 221 -~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~-------~g~tpLh~ 292 (301)
T 2b0o_E 221 -AKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG-------TFAFPLHV 292 (301)
T ss_dssp -CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH-------TTSSCCC-
T ss_pred -CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC-------CCCChhHH
Confidence 6788999999999999999999999999999999999999999999999999999999998876 37899999
Q ss_pred HHHcCC
Q 009805 234 SAYLGL 239 (525)
Q Consensus 234 A~~~g~ 239 (525)
|+..|+
T Consensus 293 A~~~g~ 298 (301)
T 2b0o_E 293 DYSWVI 298 (301)
T ss_dssp ------
T ss_pred HHhcCC
Confidence 998876
No 98
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.87 E-value=2.4e-22 Score=165.12 Aligned_cols=108 Identities=23% Similarity=0.241 Sum_probs=50.5
Q ss_pred CCChHhHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHcC
Q 009805 125 EENTALHEAVQCGNLDAVKILMEAGPNFPYSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAVNSY 204 (525)
Q Consensus 125 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~ 204 (525)
.|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..+
T Consensus 6 ~~~~~l~~A~~~~~~~~v~~ll~~~~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~ 84 (123)
T 3aaa_C 6 MCDKEFMWALKNGDLDEVKDYVAKGEDVN-RTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEG 84 (123)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCCTT-SCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCcC-ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcC
Confidence 34444444444444444444444444433 33444444444444444444444444444444444444444444444444
Q ss_pred CHHHHHHHHHhcCcCcccCCCCCCcHHHHH
Q 009805 205 AADVVEKLLAKKRHLTRERDDCGWTPLHHS 234 (525)
Q Consensus 205 ~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A 234 (525)
+.+++++|++.+++ ++.+|..|.||||+|
T Consensus 85 ~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A 113 (123)
T 3aaa_C 85 HVSCVKLLLSKGAD-KTVKGPDGLTAFEAT 113 (123)
T ss_dssp CHHHHHHHHHTTCC-TTCCCTTSCCHHHHC
T ss_pred CHHHHHHHHHcCCC-CCCcCCCCCCHHHHh
Confidence 44444444444444 344444444444444
No 99
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.87 E-value=5.2e-22 Score=189.40 Aligned_cols=140 Identities=22% Similarity=0.167 Sum_probs=100.5
Q ss_pred CChHhHHHHHcCCHHHHHHHHhcCCCCCCC-----CCCCCchHHHHHHHc---CCHHHHHHHHHhcCCCCCCCCCCCcHH
Q 009805 126 ENTALHEAVQCGNLDAVKILMEAGPNFPYS-----ANVNGETPLYMAAAR---GSKKMVAEILEKCSSAAHDGPNGKTAL 197 (525)
Q Consensus 126 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~-----~~~~g~tpL~~A~~~---g~~~~v~~Ll~~~~~~~~~~~~g~t~L 197 (525)
+.++|+.|+..|+.+.++.|++.|++++.. .+..|.||||+|+.. |+.+++++|+++|++++.+|..|.|||
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpL 230 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTAL 230 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHH
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHH
Confidence 346688888888888888888877776642 566778888888876 777888888888888777777788888
Q ss_pred HHHHHcCCHHHHHHHHHhcCcCcccCCCCCCcHHHHHHHcCChhHHHHHhhcCCCcchhcccCCCCcHHHHHHhcCC
Q 009805 198 HAAVNSYAADVVEKLLAKKRHLTRERDDCGWTPLHHSAYLGLKDITALLLEFDGSSALILDKDRKMTALLMAASQGH 274 (525)
Q Consensus 198 ~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpL~~A~~~g~ 274 (525)
|+|+..|+.+++++|++.+++ ++.+|..|.||||+|+..|+.+++++|++++++ .|.||||+|+..|+
T Consensus 231 h~A~~~g~~~~v~~Ll~~gad-~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~--------~g~tpLh~A~~~g~ 298 (301)
T 2b0o_E 231 HYAALYNQPDCLKLLLKGRAL-VGTVNEAGETALDIARKKHHKECEELLEQAQAG--------TFAFPLHVDYSWVI 298 (301)
T ss_dssp HHHHHTTCHHHHHHHHHTTCC-CSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH--------TTSSCCC-------
T ss_pred HHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC--------CCCChhHHHHhcCC
Confidence 888888888888888887777 567777777777777777777777777776543 35677777776665
No 100
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.86 E-value=6.7e-22 Score=162.49 Aligned_cols=119 Identities=21% Similarity=0.232 Sum_probs=105.9
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCcccCCCCCCcHHHHHHH
Q 009805 157 NVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAVNSYAADVVEKLLAKKRHLTRERDDCGWTPLHHSAY 236 (525)
Q Consensus 157 ~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~ 236 (525)
+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|++.+++ ++.+|..|+||||+|+.
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~tpL~~A~~ 82 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGAD-INAPDKHHITPLLSAVY 82 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCHHHHHHH
Confidence 45789999999999999999999999999999999999999999999999999999999988 68899999999999999
Q ss_pred cCChhHHHHHhhcCCCcchhcccCCCCcHHHHHHhcCCHHHH
Q 009805 237 LGLKDITALLLEFDGSSALILDKDRKMTALLMAASQGHESLA 278 (525)
Q Consensus 237 ~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v 278 (525)
.|+.+++++|+++|++. ...+. .|.||||+|+..+..+++
T Consensus 83 ~~~~~~v~~Ll~~ga~~-~~~~~-~g~t~l~~A~~~~~~~ll 122 (123)
T 3aaa_C 83 EGHVSCVKLLLSKGADK-TVKGP-DGLTAFEATDNQAIKALL 122 (123)
T ss_dssp HTCHHHHHHHHHTTCCT-TCCCT-TSCCHHHHCCCHHHHHHH
T ss_pred cCCHHHHHHHHHcCCCC-CCcCC-CCCCHHHHhCCHHHHHHh
Confidence 99999999999999887 45555 799999999655544443
No 101
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.86 E-value=1.9e-22 Score=184.26 Aligned_cols=129 Identities=25% Similarity=0.258 Sum_probs=89.9
Q ss_pred cCCCCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhc-CCCC
Q 009805 74 TNAKGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEA-GPNF 152 (525)
Q Consensus 74 ~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~-~~~~ 152 (525)
.+..|.||||+|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+.+++++|++. |.++
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~---------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~ 133 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDNRVG---------------VNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIEL 133 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHTTCC---------------TTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCC
T ss_pred cccccccccccccccCcHHHHHHHHhCCCC---------------ccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCc
Confidence 455677777777777777777777777665 555677777777777777777777777777 6665
Q ss_pred CCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhcCc
Q 009805 153 PYSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAVNSYAADVVEKLLAKKRH 218 (525)
Q Consensus 153 ~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~ 218 (525)
+ ..|..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..++.++++.|++.+..
T Consensus 134 ~-~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~ 198 (222)
T 3ehr_A 134 N-QQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAV 198 (222)
T ss_dssp C-CCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC--------
T ss_pred c-ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchh
Confidence 5 5667777777777777777777777777777777777777777777777777777777776655
No 102
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.85 E-value=1.4e-21 Score=178.51 Aligned_cols=133 Identities=25% Similarity=0.252 Sum_probs=116.3
Q ss_pred hcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHh-cCCCCCCCCCCCcHH
Q 009805 119 LGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFPYSANVNGETPLYMAAARGSKKMVAEILEK-CSSAAHDGPNGKTAL 197 (525)
Q Consensus 119 l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~L 197 (525)
++..+..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++++|+++ |++++.+|..|.|||
T Consensus 66 v~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL 144 (222)
T 3ehr_A 66 VAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVN-GLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTAL 144 (222)
T ss_dssp HHHHEEEESCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHH
T ss_pred ccccccccccccccccccCcHHHHHHHHhCCCCcc-ccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHH
Confidence 34457789999999999999999999999999976 6788999999999999999999999999 899999999999999
Q ss_pred HHHHHcCCHHHHHHHHHhcCcCcccCCCCCCcHHHHHHHcCChhHHHHHhhcCCCc
Q 009805 198 HAAVNSYAADVVEKLLAKKRHLTRERDDCGWTPLHHSAYLGLKDITALLLEFDGSS 253 (525)
Q Consensus 198 ~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~ 253 (525)
|+|+..|+.+++++|++.+++ ++.+|..|.||||+|+..++.++++.|++.+...
T Consensus 145 ~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~ 199 (222)
T 3ehr_A 145 HAAAWKGYADIVQLLLAKGAR-TDLRNIEKKLAFDMATNAACASLLKKKQGTDAVR 199 (222)
T ss_dssp HHHHHHTCHHHHHHHHHHTCC-SCCCCTTSCCHHHHCCSHHHHHHHC---------
T ss_pred HHHHHcCCHHHHHHHHHcCCC-CccccCCCCCHHHHhcchhHHHHHHHHhccchhh
Confidence 999999999999999999998 6889999999999999999999999999888765
No 103
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.83 E-value=3.1e-20 Score=175.01 Aligned_cols=126 Identities=21% Similarity=0.221 Sum_probs=105.8
Q ss_pred ChHhHHHHHcCCHHHHHHHHhcCCCCCC-----CCCCCCchHHHHHHHc---CCHHHHHHHHHhcCCCCCCCCCCCcHHH
Q 009805 127 NTALHEAVQCGNLDAVKILMEAGPNFPY-----SANVNGETPLYMAAAR---GSKKMVAEILEKCSSAAHDGPNGKTALH 198 (525)
Q Consensus 127 ~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~-----~~~~~g~tpL~~A~~~---g~~~~v~~Ll~~~~~~~~~~~~g~t~L~ 198 (525)
.++|+.|+..|+.+.++.+++.|+++.. ..+..|.||||+|+.. |+.+++++|+++|++++.+|..|.||||
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh 210 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALH 210 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHH
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHH
Confidence 4688889999999999888888887542 2367788999999888 8888999999988888888888889999
Q ss_pred HHHHcCCHHHHHHHHHhcCcCcccCCCCCCcHHHHHHHcCChhHHHHHhhcCCCc
Q 009805 199 AAVNSYAADVVEKLLAKKRHLTRERDDCGWTPLHHSAYLGLKDITALLLEFDGSS 253 (525)
Q Consensus 199 ~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~ 253 (525)
+|+..|+.+++++|++.+++ ++.+|..|.||||+|+..|+.+++++|+++++..
T Consensus 211 ~A~~~g~~~~v~~Ll~~gad-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 211 YCCLTDNAECLKLLLRGKAS-IEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp HHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred HHHHcCCHHHHHHHHHcCCC-CCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 99888888888888888887 6778888888888888888888888888877643
No 104
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.83 E-value=1.9e-20 Score=176.43 Aligned_cols=193 Identities=17% Similarity=0.107 Sum_probs=133.8
Q ss_pred cCCCCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCC
Q 009805 74 TNAKGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFP 153 (525)
Q Consensus 74 ~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~ 153 (525)
.|..+.++|+.+...|+....+++......... .+-..+.... .....-..+++........
T Consensus 62 ~d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~--------------~kP~~~s~~~----~~~~fI~aKYl~~~f~~~~ 123 (278)
T 1dcq_A 62 LDVLGTSELLLAKNIGNAGFNEIMECCLPSEDP--------------VKPNPGSDMI----ARKDYITAKYMERRYARKK 123 (278)
T ss_dssp TSCCCGGGGHHHHHSCHHHHHHHHTTTCCSSSC--------------CSCCTTCCHH----HHHHHHHHHHTTCTTSCCC
T ss_pred cCCCCHHHHHHHHHcCcHHHHHHHHhhCChhhc--------------CCCCCCCCHH----HHHHHHHHHHHHhhccccc
Confidence 567788899999999988777765433221100 0000111111 1111112233333222211
Q ss_pred CCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCC------CCCCCCCCcHHHHHHHc---CCHHHHHHHHHhcCcCcccCC
Q 009805 154 YSANVNGETPLYMAAARGSKKMVAEILEKCSSA------AHDGPNGKTALHAAVNS---YAADVVEKLLAKKRHLTRERD 224 (525)
Q Consensus 154 ~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~------~~~~~~g~t~L~~A~~~---~~~~~~~~Ll~~~~~~~~~~d 224 (525)
........++|+.|+..|+.+.++.+++.|+++ +..+..|.||||+|+.. ++.+++++|++.+++ ++.+|
T Consensus 124 ~~~~~~~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~-in~~d 202 (278)
T 1dcq_A 124 HADTAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN-LDKQT 202 (278)
T ss_dssp SSSHHHHHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSC-TTCCC
T ss_pred ccccchhhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCC-ccccC
Confidence 112223457899999999999999999999874 34577889999999988 888999999999888 67888
Q ss_pred CCCCcHHHHHHHcCChhHHHHHhhcCCCcchhcccCCCCcHHHHHHhcCCHHHHHHHHhhCCC
Q 009805 225 DCGWTPLHHSAYLGLKDITALLLEFDGSSALILDKDRKMTALLMAASQGHESLAGTIIAHYPE 287 (525)
Q Consensus 225 ~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ 287 (525)
..|+||||+|+..|+.+++++|+++|++. +..+. .|.||||+|+..|+.+++++|++++++
T Consensus 203 ~~g~TpLh~A~~~g~~~~v~~Ll~~gad~-~~~d~-~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 203 GKGSTALHYCCLTDNAECLKLLLRGKASI-EIANE-SGETPLDIAKRLKHEHCEELLTQALSG 263 (278)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT-TSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCccC-CCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 88999999999999999999999888876 44555 688888888888888888888888764
No 105
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.82 E-value=4.5e-20 Score=179.92 Aligned_cols=125 Identities=21% Similarity=0.210 Sum_probs=73.1
Q ss_pred CCCChHhHHHHHc-CCHHHHHHHHhcCCCCCCCCC--CCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHH
Q 009805 124 EEENTALHEAVQC-GNLDAVKILMEAGPNFPYSAN--VNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAA 200 (525)
Q Consensus 124 ~~g~t~Lh~A~~~-g~~~~v~~Ll~~~~~~~~~~~--~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A 200 (525)
..+.|+||.|+.. |+.++++.|+++|++++. .+ ..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|
T Consensus 197 ~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~-~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A 275 (368)
T 3jue_A 197 LHPGALLFRASGHPPSLPTMADALAHGADVNW-VNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHA 275 (368)
T ss_dssp CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTC-CCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CCCCcHHHHHHHccCCHHHHHHHHHcCCCCCc-cccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Confidence 3445566666655 666666666666655542 23 4555666666666666666666666666665566666666666
Q ss_pred HHcCCHHHHHHHHHhcCcCcccCCCCCCcHHHHHHHcCChhHHHHHhhcC
Q 009805 201 VNSYAADVVEKLLAKKRHLTRERDDCGWTPLHHSAYLGLKDITALLLEFD 250 (525)
Q Consensus 201 ~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~ 250 (525)
+..++.+++++|++.+++ ++.+|..|.||||+|+..|+.+++++|++.+
T Consensus 276 ~~~g~~~~v~~LL~~Gad-~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~ 324 (368)
T 3jue_A 276 TILGHTGLACLFLKRGAD-LGARDSEGRDPLTIAMETANADIVTLLRLAK 324 (368)
T ss_dssp HHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHcCcHHHHHHHHHCcCC-CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 666666666666666555 3555555666666666666666666665543
No 106
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.82 E-value=6.7e-20 Score=142.25 Aligned_cols=90 Identities=37% Similarity=0.525 Sum_probs=42.5
Q ss_pred CChHhHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHcCC
Q 009805 126 ENTALHEAVQCGNLDAVKILMEAGPNFPYSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAVNSYA 205 (525)
Q Consensus 126 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~ 205 (525)
|+||||+|+..|+.+++++|+++|++++ ..|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~n-~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~ 80 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVN-AKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCc-ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 3444444444444444444444444443 334444444444444444444444444444444444444444444444444
Q ss_pred HHHHHHHHHhc
Q 009805 206 ADVVEKLLAKK 216 (525)
Q Consensus 206 ~~~~~~Ll~~~ 216 (525)
.+++++|++.|
T Consensus 81 ~~~~~~Ll~~g 91 (93)
T 1n0q_A 81 LEVVKLLLEAG 91 (93)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHcC
Confidence 44444444444
No 107
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.82 E-value=1.3e-19 Score=185.66 Aligned_cols=144 Identities=19% Similarity=0.115 Sum_probs=116.6
Q ss_pred CCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcCccCCCChHhHHHHH---cCCHHHHHHHHhcCCCCC
Q 009805 77 KGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLTNEEENTALHEAVQ---CGNLDAVKILMEAGPNFP 153 (525)
Q Consensus 77 ~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~---~g~~~~v~~Ll~~~~~~~ 153 (525)
...+.||.|+..|+.+.|+.|++.+++.+.... ....|..|.||||+|+. .|+.+++++|+++|++++
T Consensus 131 ~~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~---------~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn 201 (497)
T 3lvq_E 131 PEPQRLWTAICNRDLLSVLEAFANGQDFGQPLP---------GPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLD 201 (497)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBC---------CSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTT
T ss_pred ccHHHHHHHHhccCHHHHHHHHhhcccccCCCC---------CcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCC
Confidence 344789999999999999999999987321100 01138899999999977 899999999999999987
Q ss_pred CCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCcccCCCCCCcHHHH
Q 009805 154 YSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAVNSYAADVVEKLLAKKRHLTRERDDCGWTPLHH 233 (525)
Q Consensus 154 ~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~ 233 (525)
..|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++.+++. ..+|+|.
T Consensus 202 -~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~-------~~~~~h~ 273 (497)
T 3lvq_E 202 -AKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGT-------FAFPLHV 273 (497)
T ss_dssp -CCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC----------------
T ss_pred -ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCC-------CCCccee
Confidence 77889999999999999999999999999999999999999999999999999999999999884 2368887
Q ss_pred HHHc
Q 009805 234 SAYL 237 (525)
Q Consensus 234 A~~~ 237 (525)
+...
T Consensus 274 ~~~~ 277 (497)
T 3lvq_E 274 DYSW 277 (497)
T ss_dssp ----
T ss_pred eccc
Confidence 7654
No 108
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.81 E-value=1.4e-19 Score=140.45 Aligned_cols=93 Identities=35% Similarity=0.472 Sum_probs=88.0
Q ss_pred CCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCcccCCCCCCcHHHHHHHcC
Q 009805 159 NGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAVNSYAADVVEKLLAKKRHLTRERDDCGWTPLHHSAYLG 238 (525)
Q Consensus 159 ~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g 238 (525)
+|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|++.+++ ++.+|..|+||||+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcC
Confidence 489999999999999999999999999999999999999999999999999999999998 6889999999999999999
Q ss_pred ChhHHHHHhhcCCC
Q 009805 239 LKDITALLLEFDGS 252 (525)
Q Consensus 239 ~~~~v~~Ll~~~~~ 252 (525)
+.+++++|+++|++
T Consensus 80 ~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 80 HLEVVKLLLEAGAY 93 (93)
T ss_dssp CHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHcCCC
Confidence 99999999999864
No 109
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.81 E-value=1.5e-19 Score=185.14 Aligned_cols=138 Identities=22% Similarity=0.200 Sum_probs=117.1
Q ss_pred CCChHhHHHHHcCCHHHHHHHHhcCCCCCCC-----CCCCCchHHHHHHH---cCCHHHHHHHHHhcCCCCCCCCCCCcH
Q 009805 125 EENTALHEAVQCGNLDAVKILMEAGPNFPYS-----ANVNGETPLYMAAA---RGSKKMVAEILEKCSSAAHDGPNGKTA 196 (525)
Q Consensus 125 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~-----~~~~g~tpL~~A~~---~g~~~~v~~Ll~~~~~~~~~~~~g~t~ 196 (525)
...+.||.|+..|+.++++.|++.|++++.. .+..|.||||+|+. .|+.+++++|+++|++++.+|..|.||
T Consensus 131 ~~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~Tp 210 (497)
T 3lvq_E 131 PEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTA 210 (497)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCH
T ss_pred ccHHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcH
Confidence 3447899999999999999999999998733 27789999999976 899999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHhcCcCcccCCCCCCcHHHHHHHcCChhHHHHHhhcCCCcchhcccCCCCcHHHHHHh
Q 009805 197 LHAAVNSYAADVVEKLLAKKRHLTRERDDCGWTPLHHSAYLGLKDITALLLEFDGSSALILDKDRKMTALLMAAS 271 (525)
Q Consensus 197 L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpL~~A~~ 271 (525)
||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+++|++. ..+|+|.+..
T Consensus 211 Lh~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~--------~~~~~h~~~~ 276 (497)
T 3lvq_E 211 LHYAALYNQPDCLKLLLKGRAL-VGTVNEAGETALDIARKKHHKECEELLEQAQAGT--------FAFPLHVDYS 276 (497)
T ss_dssp HHHHTTTTCHHHHHHHHHTCCC-CSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC--------------------
T ss_pred HHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCC--------CCCcceeecc
Confidence 9999999999999999999999 6889999999999999999999999999999876 3368887654
No 110
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.81 E-value=1.7e-19 Score=175.83 Aligned_cols=149 Identities=17% Similarity=0.166 Sum_probs=117.7
Q ss_pred CCCCCchHHHHHHHc-CCHHHHHHHHHhcCCCCCCC--CCCCcHHHHHHHcCCHHHHHHHHHhcCcCcccCCCCCCcHHH
Q 009805 156 ANVNGETPLYMAAAR-GSKKMVAEILEKCSSAAHDG--PNGKTALHAAVNSYAADVVEKLLAKKRHLTRERDDCGWTPLH 232 (525)
Q Consensus 156 ~~~~g~tpL~~A~~~-g~~~~v~~Ll~~~~~~~~~~--~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tpL~ 232 (525)
.+..+.|+||.|+.. |+.+++++|+++|++++..+ ..|.||||+|+..++.+++++|++.+++ ++.+|..|+||||
T Consensus 195 ~~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gad-vn~~d~~G~TpLh 273 (368)
T 3jue_A 195 GSLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGAN-VNQADSAGRGPLH 273 (368)
T ss_dssp --CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHH
T ss_pred ccCCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCCCCCCCCHHH
Confidence 345678999999999 99999999999999999988 8999999999999999999999999998 6889999999999
Q ss_pred HHHHcCChhHHHHHhhcCCCcchhcccCCCCcHHHHHHhcCCHHHHHHHHhhCCCc--cccccCCCCchhHHHHhcC
Q 009805 233 HSAYLGLKDITALLLEFDGSSALILDKDRKMTALLMAASQGHESLAGTIIAHYPEC--YDLVDNGGWNVLHFLMVSL 307 (525)
Q Consensus 233 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~--~~~~d~~g~t~Lh~A~~~~ 307 (525)
+|+..|+.+++++|+++|++. ...+. .|.||||+|+..|+.+++++|++.+... ....+..+.|+++++....
T Consensus 274 ~A~~~g~~~~v~~LL~~Gad~-~~~d~-~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~~ 348 (368)
T 3jue_A 274 HATILGHTGLACLFLKRGADL-GARDS-EGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDFS 348 (368)
T ss_dssp HHHHHTCHHHHHHHHHTTCCT-TCCCT-TSCCHHHHHHHTTCHHHHHHHHHHHC-----------------------
T ss_pred HHHHcCcHHHHHHHHHCcCCC-CCcCC-CCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHHH
Confidence 999999999999999999987 55555 7999999999999999999999876432 2245667889998877654
No 111
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.79 E-value=7.8e-20 Score=148.09 Aligned_cols=107 Identities=26% Similarity=0.398 Sum_probs=54.9
Q ss_pred cCCCCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCC
Q 009805 74 TNAKGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFP 153 (525)
Q Consensus 74 ~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~ 153 (525)
+|.+|.||||+|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+.+++++|+++|++++
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~---------------~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~ 69 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGAD---------------VNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVN 69 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCC---------------SSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTT
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---------------CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCc
Confidence 444555555555555555555555555444 33445555555555555555555555555555543
Q ss_pred CCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcH
Q 009805 154 YSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTA 196 (525)
Q Consensus 154 ~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~ 196 (525)
..|..|.||||+|+..|+.+++++|+++|++++.++..|.+|
T Consensus 70 -~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~ 111 (115)
T 2l6b_A 70 -ARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHH 111 (115)
T ss_dssp -CCCTTCCCTTHHHHTTTCHHHHHHHHTTSSSHHHHSCCCC--
T ss_pred -ccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCcccccc
Confidence 344455555555555555555555555555555544444443
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.78 E-value=3.4e-19 Score=144.28 Aligned_cols=108 Identities=27% Similarity=0.357 Sum_probs=92.0
Q ss_pred CccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHH
Q 009805 121 LTNEEENTALHEAVQCGNLDAVKILMEAGPNFPYSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAA 200 (525)
Q Consensus 121 ~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A 200 (525)
.+|.+|.||||+|+..|+.+++++|+++|++++ ..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A 82 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVN-ARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLA 82 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSS-CCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHH
Confidence 468889999999999999999999999988876 6778889999999999999999999999988888888899999999
Q ss_pred HHcCCHHHHHHHHHhcCcCcccCCCCCCcH
Q 009805 201 VNSYAADVVEKLLAKKRHLTRERDDCGWTP 230 (525)
Q Consensus 201 ~~~~~~~~~~~Ll~~~~~~~~~~d~~g~tp 230 (525)
+..++.+++++|++++++ ++.++..|.+|
T Consensus 83 ~~~~~~~~~~~Ll~~ga~-~n~~~~~~~~~ 111 (115)
T 2l6b_A 83 KKNGHHEIVKLLDAKGAD-VNARSWGSSHH 111 (115)
T ss_dssp HTTTCHHHHHHHHTTSSS-HHHHSCCCC--
T ss_pred HHCCCHHHHHHHHHcCCC-CCcCCcccccc
Confidence 998899999999988888 57777777776
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.69 E-value=9.9e-17 Score=128.46 Aligned_cols=93 Identities=30% Similarity=0.414 Sum_probs=77.2
Q ss_pred hcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHH
Q 009805 119 LGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFPYSANVNGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALH 198 (525)
Q Consensus 119 l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~ 198 (525)
....|.+|.||||+|+..|+.+++++|+++|++++ ..|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~-~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~ 95 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGADVA-AKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFD 95 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCC-ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHH
Confidence 44567888899999999999999999999888876 56788899999999999999999999998888888888889999
Q ss_pred HHHHcCCHHHHHHH
Q 009805 199 AAVNSYAADVVEKL 212 (525)
Q Consensus 199 ~A~~~~~~~~~~~L 212 (525)
+|+..++.+++++|
T Consensus 96 ~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 96 ISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHTCHHHHHHH
T ss_pred HHHHcCCHHHHHHh
Confidence 99888888888876
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.69 E-value=7.1e-17 Score=129.30 Aligned_cols=94 Identities=22% Similarity=0.377 Sum_probs=83.5
Q ss_pred cccccCCCCCcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcC
Q 009805 70 LLIQTNAKGDSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAG 149 (525)
Q Consensus 70 ~l~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~ 149 (525)
.....|.+|.||||+|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+.+++++|+++|
T Consensus 16 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~---------------i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~g 80 (110)
T 2zgd_A 16 RGSHMGSDLGKKLLEAARAGQDDEVRILMANGAD---------------VAAKDKNGSTPLHLAARNGHLEVVKLLLEAG 80 (110)
T ss_dssp ------CCHHHHHHHHHHHTCHHHHHHHHHTTCC---------------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred cccccCCccchHHHHHHHcCCHHHHHHHHHcCCC---------------CCccCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 3456788999999999999999999999999887 6778999999999999999999999999999
Q ss_pred CCCCCCCCCCCchHHHHHHHcCCHHHHHHH
Q 009805 150 PNFPYSANVNGETPLYMAAARGSKKMVAEI 179 (525)
Q Consensus 150 ~~~~~~~~~~g~tpL~~A~~~g~~~~v~~L 179 (525)
++++ ..|..|.||||+|+..|+.+++++|
T Consensus 81 a~~~-~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 81 ADVX-AQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp CCTT-CCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred CCcc-ccccCCCcHHHHHHHcCCHHHHHHh
Confidence 9976 6788999999999999999999987
No 115
>3gvo_A Pumilio 2, pumilio homolog 2; RNA-binding, PUF domain, RNA binding protein; HET: DTD; 1.60A {Mus musculus} SCOP: a.118.1.8 PDB: 3gvt_A 3q0q_A 3q0r_A 3q0s_A 1ib2_A 1m8w_A 1m8x_A 1m8y_A 1m8z_A 3q0l_A 3q0m_A 3q0n_A 3q0o_A 3q0p_A 2yjy_A 3bsx_A 3bsb_A 3h3d_X
Probab=61.85 E-value=7 Score=36.97 Aligned_cols=193 Identities=12% Similarity=0.113 Sum_probs=93.7
Q ss_pred CccCCCChHhHHHHHcCCHHHHHHHHhc--CCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCC-C--CCCCCCCCc
Q 009805 121 LTNEEENTALHEAVQCGNLDAVKILMEA--GPNFPYSANVNGETPLYMAAARGSKKMVAEILEKCSS-A--AHDGPNGKT 195 (525)
Q Consensus 121 ~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~--~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~-~--~~~~~~g~t 195 (525)
+.|..|+..+.-....++.+....+++. |.-.....+..|...+..+......+-...+++.-.. + -..|..|..
T Consensus 68 ~~d~~gn~vvQklle~~~~~~~~~i~~~i~g~~~~l~~~~~G~rvvQk~le~~~~~~~~~i~~el~~~~~~L~~d~~Gn~ 147 (351)
T 3gvo_A 68 MTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNH 147 (351)
T ss_dssp HTSTTHHHHHHHHHHHCCHHHHHHHHHHHTTCHHHHHTSTTHHHHHHHHHHHSCHHHHHHHHGGGTTCHHHHHHSTTHHH
T ss_pred HhChhhhHHHHHHHhhCCHHHHHHHHHHHHhhHHHHhhCHHhHHHHHHHHHhCCHHHHHHHHHHhhhhHHHHHHhhhhhH
Confidence 4688888888888888887766666653 2111223456676677666666665554444433211 0 014566666
Q ss_pred HHHHHHHcCCHHHHHHHHHhcCcC--cccCCCCCCcHHHHHHHcCCh----hHHHHHhhcCCCcchhcccCCCCcHHHHH
Q 009805 196 ALHAAVNSYAADVVEKLLAKKRHL--TRERDDCGWTPLHHSAYLGLK----DITALLLEFDGSSALILDKDRKMTALLMA 269 (525)
Q Consensus 196 ~L~~A~~~~~~~~~~~Ll~~~~~~--~~~~d~~g~tpL~~A~~~g~~----~~v~~Ll~~~~~~~~~~~~~~g~tpL~~A 269 (525)
.+..+...+..+..+.+++.-... .-..+..|...+..+...... .+++.|..+ ......+ ..|...+...
T Consensus 148 ViQk~l~~~~~~~~~~i~~~~~~~~~~ls~~~~G~~Vvq~~le~~~~~~~~~ii~~l~~~--~~~L~~d-~~Gn~ViQ~~ 224 (351)
T 3gvo_A 148 VVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQH--TEQLVQD-QYGNYVIQHV 224 (351)
T ss_dssp HHHHHHHHSCGGGTHHHHHHTTTTHHHHHTSTTHHHHHHHHHHHSCHHHHHHHHHHHHTT--HHHHHTS-TTHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCcHhHHHHHHHHHHCCHHHHHHHHHHHhhh--HHhcCCC-chHHHHHHHH
Confidence 666666655544444444321110 011233343333333333322 222222211 1112222 2566666666
Q ss_pred HhcCCHHHHHHHHhhCCCcc--ccccCCCCchhHHHHhcCCHHHHHHHh
Q 009805 270 ASQGHESLAGTIIAHYPECY--DLVDNGGWNVLHFLMVSLHESKLKRLL 316 (525)
Q Consensus 270 ~~~g~~~~v~~Ll~~~~~~~--~~~d~~g~t~Lh~A~~~~~~~~~~~ll 316 (525)
...+..+.-+.+++.-...+ -..++.|...+..+...+..+..+.++
T Consensus 225 l~~~~~~~~~~i~~~l~~~~~~Ls~~k~gs~Vvek~l~~~~~~~r~~ii 273 (351)
T 3gvo_A 225 LEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLI 273 (351)
T ss_dssp HHHSCHHHHHHHHHTTTTCHHHHHTSTTHHHHHHHHHHHSCHHHHHHHH
T ss_pred HHhCchhhHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHhCCHHHHHHHH
Confidence 66666555555554322111 113555666666666666554333333
No 116
>3gvo_A Pumilio 2, pumilio homolog 2; RNA-binding, PUF domain, RNA binding protein; HET: DTD; 1.60A {Mus musculus} SCOP: a.118.1.8 PDB: 3gvt_A 3q0q_A 3q0r_A 3q0s_A 1ib2_A 1m8w_A 1m8x_A 1m8y_A 1m8z_A 3q0l_A 3q0m_A 3q0n_A 3q0o_A 3q0p_A 2yjy_A 3bsx_A 3bsb_A 3h3d_X
Probab=55.89 E-value=9.7 Score=35.99 Aligned_cols=27 Identities=11% Similarity=0.075 Sum_probs=18.3
Q ss_pred ccCCCCchhHHHHhcCCHHHHHHHhhC
Q 009805 292 VDNGGWNVLHFLMVSLHESKLKRLLKD 318 (525)
Q Consensus 292 ~d~~g~t~Lh~A~~~~~~~~~~~ll~~ 318 (525)
.|..|+..+..+......+....+++.
T Consensus 292 ~d~ygnyViq~~L~~~~~~~r~~i~~~ 318 (351)
T 3gvo_A 292 KDQYANYVVQKMIDMAEPAQRKIIMHK 318 (351)
T ss_dssp HSTTHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHhCCHHHHHHHHHH
Confidence 577788888887777766655555543
No 117
>3k49_A MRNA-binding protein PUF3; PUF3, pumilio, RNA binding, mitochondrial mRNA,, membrane, mitochondrion; HET: CIT; 2.50A {Saccharomyces cerevisiae} SCOP: a.118.1.0 PDB: 3k4e_A
Probab=55.33 E-value=10 Score=36.09 Aligned_cols=197 Identities=10% Similarity=0.039 Sum_probs=87.5
Q ss_pred CccCCCChHhHHHHHcCCHHHHHHHHhcCC-C-CCCCCCCCCchHHHHHHHcCCHHHHHHHHHhcCC-C--CCCCCCCCc
Q 009805 121 LTNEEENTALHEAVQCGNLDAVKILMEAGP-N-FPYSANVNGETPLYMAAARGSKKMVAEILEKCSS-A--AHDGPNGKT 195 (525)
Q Consensus 121 ~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~-~-~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~-~--~~~~~~g~t 195 (525)
+.|..|+..+......+..+..+.+++.-. . .....+..|.-.+.-+......+-...+++.-.. . -..|..|..
T Consensus 73 ~~d~~gn~vvQkll~~~~~~~~~~i~~~~~g~~~~L~~~~~G~rVlQk~le~~~~~q~~~ii~el~~~~~~L~~d~~Gn~ 152 (369)
T 3k49_A 73 SNDVFGNYVIQKFFEFGSKIQKNTLVDQFKGNMKQLSLQMYACRVIQKALEYIDSNQRIELVLELSDSVLQMIKDQNGNH 152 (369)
T ss_dssp HHSTTTHHHHHHHHHHCCHHHHHHHHHHHTTCHHHHHHSTTHHHHHHHHHHHSCHHHHHHHHGGGTTCHHHHHHSTTHHH
T ss_pred hhCcccccHHHHHHHhCCHHHHHHHHHHHhhhHHHHhcChhhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhcCcccch
Confidence 357778887777777777766666655311 1 0112234455555555555544443334332110 0 013555665
Q ss_pred HHHHHHHcCCHHHHHHHHHhcCc--CcccCCCCCCcHHHHHHHcCChhHHHHHhhcC-CCcchhcccCCCCcHHHHHHhc
Q 009805 196 ALHAAVNSYAADVVEKLLAKKRH--LTRERDDCGWTPLHHSAYLGLKDITALLLEFD-GSSALILDKDRKMTALLMAASQ 272 (525)
Q Consensus 196 ~L~~A~~~~~~~~~~~Ll~~~~~--~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~-~~~~~~~~~~~g~tpL~~A~~~ 272 (525)
.+...+..+..+..+.+++.-.. ..-..+..|...+..+...+..+.-+.+++.- ........+..|...+..+...
T Consensus 153 ViQ~~l~~~~~~~~~~i~~~~~~~~~~ls~~~~Gs~Vvq~~l~~~~~~~~~~i~~~l~~~~~~L~~d~~GnyViQ~~l~~ 232 (369)
T 3k49_A 153 VIQKAIETIPIEKLPFILSSLTGHIYHLSTHSYGCRVIQRLLEFGSSEDQESILNELKDFIPYLIQDQYGNYVIQYVLQQ 232 (369)
T ss_dssp HHHHHHHHSCGGGCHHHHHHHTTTHHHHHTSTTHHHHHHHHHHHSCHHHHHHHHHTTTTCHHHHHHSTTHHHHHHHHHTC
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHhCCCccCcHHHHHHHhCCHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhc
Confidence 55555554443322222221100 01123344444454444444433333333211 0111111112455455555544
Q ss_pred CCH----------HHHHHHHhhCCCccccccCCCCchhHHHHhcCCHHHHHHHhhCc
Q 009805 273 GHE----------SLAGTIIAHYPECYDLVDNGGWNVLHFLMVSLHESKLKRLLKDP 319 (525)
Q Consensus 273 g~~----------~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~ll~~~ 319 (525)
+.. .+++.+..+... -..++.|...+..+...+..+..+.+++..
T Consensus 233 ~~~~~~~~~~~~~~i~~~l~~~~~~--Ls~~k~gS~Vvek~l~~~~~~~r~~ii~~l 287 (369)
T 3k49_A 233 DQFTNKEMVDIKQEIIETVANNVVE--YSKHKFASNVVEKSILYGSKNQKDLIISKI 287 (369)
T ss_dssp CTTSCHHHHHHHHHHHHHHHTTHHH--HHTSTTHHHHHHHHHHHSCHHHHHHHHTTT
T ss_pred CCchhhhhHhHHHHHHHHHHHHHHH--HHhhhHhhHHHHHHHHhCCHHHHHHHHHHH
Confidence 432 223333322111 124566777777777777666666666543
No 118
>3k49_A MRNA-binding protein PUF3; PUF3, pumilio, RNA binding, mitochondrial mRNA,, membrane, mitochondrion; HET: CIT; 2.50A {Saccharomyces cerevisiae} SCOP: a.118.1.0 PDB: 3k4e_A
Probab=44.75 E-value=28 Score=33.05 Aligned_cols=26 Identities=15% Similarity=-0.017 Sum_probs=16.1
Q ss_pred ccCCCCchhHHHHhcCCHHHHHHHhh
Q 009805 292 VDNGGWNVLHFLMVSLHESKLKRLLK 317 (525)
Q Consensus 292 ~d~~g~t~Lh~A~~~~~~~~~~~ll~ 317 (525)
.|..|+..+..+......+..+.+++
T Consensus 309 ~D~~gNyViq~~l~~~~~~~~~~l~~ 334 (369)
T 3k49_A 309 KDQFANYVIQKLVNVSEGEGKKLIVI 334 (369)
T ss_dssp TSTTHHHHHHHHHHHCCHHHHHHHHH
T ss_pred hCcchHHHHHHHHHhCCHHHHHHHHH
Confidence 46667777777776666554444444
No 119
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=30.05 E-value=2.3e+02 Score=23.36 Aligned_cols=130 Identities=9% Similarity=0.049 Sum_probs=63.9
Q ss_pred CcHHHHHHHcCChhHHHHHHHhhhcCChhHhhhhhhhHHHhcCccCCCChHhHHHHHcCCHHHHHHHHhcCCCCCCCCCC
Q 009805 79 DSPLHAAAKCGRPAVVKVLIEFAKKQPTAMKCCAKTAWQMLGLTNEEENTALHEAVQCGNLDAVKILMEAGPNFPYSANV 158 (525)
Q Consensus 79 ~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~ 158 (525)
++=+-.|...|+.+....+.+.... .......=..|...|++++++.-..+-.++.
T Consensus 9 ~~rF~LAL~lg~l~~A~e~a~~l~~-------------------~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~----- 64 (177)
T 3mkq_B 9 HIRFDLALEYGNLDAALDEAKKLND-------------------SITWERLIQEALAQGNASLAEMIYQTQHSFD----- 64 (177)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHCC-------------------HHHHHHHHHHHHHTTCHHHHHHHHHHTTCHH-----
T ss_pred HHHHHHHHhcCCHHHHHHHHHHhCC-------------------HHHHHHHHHHHHHcCChHHHHHHHHHhCCHH-----
Confidence 3445677788888877666554321 0011223345667788888877776544432
Q ss_pred CCchHHHHHHHcCCHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHcCCHH-HHHHHHHhcCcCcccCCCCCCcHHHHHHHc
Q 009805 159 NGETPLYMAAARGSKKMVAEILEKCSSAAHDGPNGKTALHAAVNSYAAD-VVEKLLAKKRHLTRERDDCGWTPLHHSAYL 237 (525)
Q Consensus 159 ~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~-~~~~Ll~~~~~~~~~~d~~g~tpL~~A~~~ 237 (525)
..+.+....|+.+-++.+.+... ...+-....+.+...|+.+ .++.|.+.+.. .-+...|-.+
T Consensus 65 ---~L~~Ly~~tg~~e~L~kla~iA~----~~g~~n~af~~~l~lGdv~~~i~lL~~~~r~---------~eA~~~A~t~ 128 (177)
T 3mkq_B 65 ---KLSFLYLVTGDVNKLSKMQNIAQ----TREDFGSMLLNTFYNNSTKERSSIFAEGGSL---------PLAYAVAKAN 128 (177)
T ss_dssp ---HHHHHHHHHTCHHHHHHHHHHHH----HTTCHHHHHHHHHHHTCHHHHHHHHHHTTCH---------HHHHHHHHHT
T ss_pred ---HHHHHHHHhCCHHHHHHHHHHHH----HCccHHHHHHHHHHcCCHHHHHHHHHHCCCh---------HHHHHHHHHc
Confidence 23344444566665555543210 0112233455555555543 44444443221 0123344445
Q ss_pred CChhHHHHHhh
Q 009805 238 GLKDITALLLE 248 (525)
Q Consensus 238 g~~~~v~~Ll~ 248 (525)
|..++.+.+++
T Consensus 129 g~~~~a~~~~~ 139 (177)
T 3mkq_B 129 GDEAAASAFLE 139 (177)
T ss_dssp TCHHHHHHHHH
T ss_pred CcHHHHHHHHH
Confidence 55555555554
No 120
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=28.59 E-value=21 Score=20.89 Aligned_cols=18 Identities=22% Similarity=0.582 Sum_probs=12.7
Q ss_pred HHHHHHHcCCcchhhhhh
Q 009805 4 KLYEAATNGEIEPFNGIA 21 (525)
Q Consensus 4 ~L~~A~~~g~~~~v~~ll 21 (525)
.++.||..||.+.++.|-
T Consensus 16 qiyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 16 QMDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHH
Confidence 567777777777777653
No 121
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=27.88 E-value=2.5e+02 Score=23.18 Aligned_cols=49 Identities=18% Similarity=0.231 Sum_probs=23.9
Q ss_pred CCChHhHHHHHcCCHH-HHHHHHhcCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHh
Q 009805 125 EENTALHEAVQCGNLD-AVKILMEAGPNFPYSANVNGETPLYMAAARGSKKMVAEILEK 182 (525)
Q Consensus 125 ~g~t~Lh~A~~~g~~~-~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~ 182 (525)
+-+.+++.+...|+++ +++.|.+.|.- .-+...|-.+|..++.+.+++.
T Consensus 91 ~~n~af~~~l~lGdv~~~i~lL~~~~r~---------~eA~~~A~t~g~~~~a~~~~~~ 140 (177)
T 3mkq_B 91 DFGSMLLNTFYNNSTKERSSIFAEGGSL---------PLAYAVAKANGDEAAASAFLEQ 140 (177)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHTTCH---------HHHHHHHHHTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHcCCHHHHHHHHHHCCCh---------HHHHHHHHHcCcHHHHHHHHHH
Confidence 3345556665666653 44444442211 1233445556666666666543
No 122
>2lx0_A Membrane fusion protein P14; membrane fusion protein transmembrane domain, P14 fast prote ARCH, micelle-peptide complex, membrane protein; NMR {Synthetic}
Probab=24.05 E-value=59 Score=17.24 Aligned_cols=15 Identities=47% Similarity=0.521 Sum_probs=12.3
Q ss_pred hHHHHHHHHHHHHHh
Q 009805 429 HLVVAALTATVTFAA 443 (525)
Q Consensus 429 ~~vva~LiaTv~Faa 443 (525)
..|+|.|+|-.||-|
T Consensus 6 weviaglvalltfla 20 (32)
T 2lx0_A 6 WEVIAGLVALLTFLA 20 (32)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 458899999999875
Done!