BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009812
(524 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P09379|GYP7_YARLI GTPase-activating protein GYP7 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=GYP7 PE=3 SV=2
Length = 730
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 84/156 (53%), Gaps = 20/156 (12%)
Query: 355 EDHEAFWCFAGFMKKARHNFRLDEVGIRRQLSIVSKIIKCKDNHLYRHLEQLQAEDCFFV 414
+D AFW F+ FM++ N+ D+ G+R QL + +++ LY+HLE+ ++ + FF
Sbjct: 532 DDTLAFWAFSAFMERMERNYLRDQSGMRNQLLCLDHLVQFMLPSLYKHLEKTESTNLFFF 591
Query: 415 YRMVVVLFRRELTFEQTLCLWEVIWADQAAIRAGIAKSAWGRMRLRAPPTDDLLLYAIAA 474
+RM++V F+REL ++ L LWEV+W D + +L+ A
Sbjct: 592 FRMLLVWFKRELLWDDVLRLWEVLWTDYL--------------------SSQFVLFVCLA 631
Query: 475 CVLQRRKLIIEKYSSMDEIMRECNSMAGHLDVWKLL 510
+ + + ++I+ + DEI++ N ++ +D+ +LL
Sbjct: 632 ILDKHKDVMIDHLAGFDEILKYMNELSMTIDLDELL 667
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%)
Query: 71 RRKHALLPKQWKTFFTPDGKLSEGGVKFLKKVRSGGVDPSIRAEVWPFLLGVYDLKSSKE 130
+R++ + +W FF +G+L + +++ GG+ P++R E W FLLGVY S+
Sbjct: 353 QRRNEVSLAEWNAFFDYNGRLIVTVNEVKERIFHGGLAPAVRPEGWLFLLGVYPWDSTAA 412
Query: 131 ERDSVKAEKRKEYENLRKE 149
ER + ++ R +Y L+KE
Sbjct: 413 ERKELVSKLRVDYNRLKKE 431
>sp|Q6BU76|GYP7_DEBHA GTPase-activating protein GYP7 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=GYP7 PE=3 SV=2
Length = 757
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 83/166 (50%), Gaps = 20/166 (12%)
Query: 359 AFWCFAGFMKKARHNFRLDEVGIRRQLSIVSKIIKCKDNHLYRHLEQLQAEDCFFVYRMV 418
FW F FM + NF D+ G++ Q+ ++++++ L++HLE+ ++ D +F +RM+
Sbjct: 557 TFWAFVNFMDRMERNFLRDQSGMKNQMLTLNELVQFMLPDLFKHLEKCESTDLYFFFRML 616
Query: 419 VVLFRRELTFEQTLCLWEVIWADQAAIRAGIAKSAWGRMRLRAPPTDDLLLYAIAACVLQ 478
+V F+RE + L LWE++W D + G+ L +A+A
Sbjct: 617 LVWFKREFEWSSVLSLWEILWTDYYS----------GQFH---------LFFALAVLSDN 657
Query: 479 RRKLIIEKYSSMDEIMRECNSMAGHLDVWKLLDDAHDLVVTLHAKI 524
R +I + S DE+++ N ++ ++++ LL A L + I
Sbjct: 658 ER-IIRQNLSRFDEVLKYMNDLSMNMNLNHLLIRAELLFLRFRRMI 702
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%)
Query: 68 SRRRRKHALLPKQWKTFFTPDGKLSEGGVKFLKKVRSGGVDPSIRAEVWPFLLGVYDLKS 127
S+ R+ + +W+ F G+L + ++ GG++ IR E W FLL VY S
Sbjct: 357 SKTSRRKPISKVEWEGLFDFSGRLIISIDEIKDRIFHGGLEDCIRGEAWLFLLNVYPWDS 416
Query: 128 SKEERDSVKAEKRKEYENLR 147
S EER +++ + YE ++
Sbjct: 417 SAEERKTLRNSFQTAYEEIK 436
>sp|Q9UUH7|GYP7_SCHPO GTPase-activating protein gyp7 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=gyp7 PE=3 SV=1
Length = 743
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 75/146 (51%), Gaps = 20/146 (13%)
Query: 359 AFWCFAGFMKKARHNFRLDEVGIRRQLSIVSKIIKCKDNHLYRHLEQLQAEDCFFVYRMV 418
FW G MK+ NF D+ G+ RQL + +I+ D L+ HLE+ + + F +RM+
Sbjct: 550 TFWGMVGLMKRLHFNFLRDQSGMHRQLDTLRLLIEFMDPELFAHLEKTDSSNLFCFFRML 609
Query: 419 VVLFRRELTFEQTLCLWEVIWADQAAIRAGIAKSAWGRMRLRAPPTDDLLLYAIAACVLQ 478
++ F+RE +E L LW+V++ + + I + YAIA +
Sbjct: 610 LIYFKREFDWEVLLKLWDVLFTNYLSYDYHI-----------------FVAYAIAE---R 649
Query: 479 RRKLIIEKYSSMDEIMRECNSMAGHL 504
R++++ + S+ DE+++ N ++G L
Sbjct: 650 HREVLLNQTSAFDEVLKYFNELSGKL 675
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 49/88 (55%)
Query: 69 RRRRKHALLPKQWKTFFTPDGKLSEGGVKFLKKVRSGGVDPSIRAEVWPFLLGVYDLKSS 128
R +R L +QW + F GKL + L + GG+ PS+R EVWPFLL VY S+
Sbjct: 374 RVKRDDPLSVEQWNSMFNAHGKLQVDVHRVLGIIFHGGIQPSLRKEVWPFLLSVYPWDST 433
Query: 129 KEERDSVKAEKRKEYENLRKECRKIIHR 156
EER + ++EY L+++ + IH+
Sbjct: 434 SEERRVIYLSLQEEYCTLKRKWYEDIHK 461
>sp|Q6FWI1|GYP7_CANGA GTPase-activating protein GYP7 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=GYP7 PE=3 SV=1
Length = 745
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 92/211 (43%), Gaps = 36/211 (17%)
Query: 311 SEWTIYSPSQAAVSEMKAQRSAQIVGLKDYDHLEPSRIYHAARLEDHEAFWCFAGFMKKA 370
+ + I++P+ V M D L P +Y+ R ++ FWCF FM++
Sbjct: 508 TTYNIFNPNLGYVQGMT-------------DLLSP--LYYIIR-DEETTFWCFTNFMERM 551
Query: 371 RHNFRLDEVGIRRQLSIVSKIIKCKDNHLYRHLEQLQAEDCFFVYRMVVVLFRRELTFEQ 430
NF D+ GIR Q+ ++ + + L HL++ + D FF +RM++V F+RE ++
Sbjct: 552 ERNFLRDQSGIRDQMLALTDLCQLMLPRLSAHLQKCDSSDLFFCFRMLLVWFKREFNYDD 611
Query: 431 TLCLWEVIWADQAAIRAGIAKSAWGRMRLRAPPTDDLLLYAIAACVLQRRKLIIEKYSSM 490
+WEV + D + + L+ + A + + I+ +
Sbjct: 612 IFNIWEVFFTDFYSSQYQ--------------------LFFMLAILQKNSSPIVNNLQTF 651
Query: 491 DEIMRECNSMAGHLDVWKLLDDAHDLVVTLH 521
D++++ N + ++ L+ + L + H
Sbjct: 652 DQVIKYFNDLNSKMNWRDLMVRSELLFIQFH 682
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 72 RKHALLPKQWKTFFTPDGKLSEGGVKFLKKVRSGGV-DPSIRAEVWPFLLGVYDLKSSKE 130
R H + ++W + F +G+L+ + + GG+ D + R EVWPFLLGVY SS++
Sbjct: 356 RNHPMTKQKWNSLFDSEGRLTVTVNEVKDYIFHGGLADDATRKEVWPFLLGVYPWDSSED 415
Query: 131 ERDSVKAEKRKEYENLRKE 149
ER ++ EY L+++
Sbjct: 416 ERKQLRKALHDEYMELKQK 434
>sp|O43147|SGSM2_HUMAN Small G protein signaling modulator 2 OS=Homo sapiens GN=SGSM2 PE=1
SV=4
Length = 1006
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 108/473 (22%), Positives = 187/473 (39%), Gaps = 83/473 (17%)
Query: 96 VKFLKKVRSGGVDPSIRAEVWPFLLGVYDLKSSKEERDSVKAEKRKEYENLRKE---CRK 152
++ L++V GG++ IR +VWPFLLG Y SK+E + V A Y+ + E C
Sbjct: 556 LELLRQVYYGGIEHEIRKDVWPFLLGHYKFGMSKKEMEQVDAVVAARYQQVLAEWKACEV 615
Query: 153 IIHRYEK----SSKLKETTGKSSN--------EDSGDLSQVF------DSPGLEDEASSR 194
++ + E+ +++ K ++G S + DS + VF + P +D SR
Sbjct: 616 VVRQREREAHPATRTKFSSGSSIDSHVQRLIHRDSTISNDVFISVDDLEPPEPQDPEDSR 675
Query: 195 RSVSSDG-----GSPVAEDLDHPVYDQSPECSGLLEGEDERDKSVLTCEDASAGDTESTD 249
+ G+ V E H V SP+ SGL R+ SV + +S + +S
Sbjct: 676 PKPEQEAGPGTPGTAVVEQ-QHSVEFDSPD-SGL---PSSRNYSVASGIQSSLDEGQSVG 730
Query: 250 SDSSEDLENIPLLSVEGAEARHENPKESSSLSKADGN-----------SKFYTDEDFAT- 297
+ + A P++ S G + YT E T
Sbjct: 731 FEEEDGGGEEGSSGPGPAAHTLREPQDPSQEKPQAGELEAGEELAAVCAAAYTIELLDTV 790
Query: 298 ---WQRIIRLDAVRANSEWTIYSPSQAAVSEMKAQRSAQIVGLKDYDHLEPSRIYHAARL 354
RI + D R + + ++P +R ++ ++HL+ + L
Sbjct: 791 ALNLHRIDK-DVQRCDRNYWYFTPP-------NLERLRDVMCSYVWEHLDVGYVQGMCDL 842
Query: 355 ---------EDHEAFWCFAGFMKKARHNFRLDEVGIRRQLSIVSKIIKCKDNHLYRHLEQ 405
D A+ CF+ MK+ NF + + + + +I+ D+ L+ + Q
Sbjct: 843 LAPLLVTLDNDQLAYSCFSHLMKRMSQNFP-NGGAMDTHFANMRSLIQILDSELFELMHQ 901
Query: 406 L-QAEDCFFVYRMVVVLFRRELTFEQTLCLWEVIWADQAAIRAGIAKSAWGRMRLRAPPT 464
+F YR ++ F+REL +E +WEVIWA R +
Sbjct: 902 NGDYTHFYFCYRWFLLDFKRELLYEDVFAVWEVIWA------------------ARHISS 943
Query: 465 DDLLLYAIAACVLQRRKLIIEKYSSMDEIMRECNSMAGHLDVWKLLDDAHDLV 517
+ +L+ A V R++I + +I++ N A H D ++L A DLV
Sbjct: 944 EHFVLFIALALVEAYREIIRDNNMDFTDIIKFFNERAEHHDAQEILRIARDLV 996
>sp|Q80U12|SGSM2_MOUSE Small G protein signaling modulator 2 OS=Mus musculus GN=Sgsm2 PE=2
SV=2
Length = 1005
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 111/471 (23%), Positives = 183/471 (38%), Gaps = 80/471 (16%)
Query: 96 VKFLKKVRSGGVDPSIRAEVWPFLLGVYDLKSSKEERDSVKAEKRKEYENLRKE---CRK 152
++ L++V GGV+ IR +VWPFLLG Y SK+E + V Y+ + E C
Sbjct: 556 LELLRQVYYGGVEHEIRKDVWPFLLGHYKFGMSKKEMEQVDTAVAARYQQVLAEWKACEV 615
Query: 153 IIHRYEKSSKLKETTGKSS------------NEDSGDLSQVFDS---------PGLEDEA 191
++ + E+ + T SS + DS + VF S LED
Sbjct: 616 VVRQREREAHPATLTKFSSGSSIDSHVQRLVHRDSTISNDVFISVDDLEPSGPQDLEDSK 675
Query: 192 SSRRSVSSDGGSPVAEDLDHPVYDQSPECSGLLEGEDERDKSVLTCEDASAGDTEST--- 248
R G +A V SP+ SGL R+ SV + +S + +S
Sbjct: 676 PKREQEPGAGTPGIAAAEQQSVEFDSPD-SGL---PSSRNYSVASGIQSSLDEAQSVGFE 731
Query: 249 DSDSSEDLENIPLLSVEGAEARHENPKES-SSLSKADGNSKF-------YTDEDFAT--- 297
D + ED P + H+ +E+ + S+ + + YT E T
Sbjct: 732 DDGAGEDGSEGPATAAHTFPGPHDPGQETLAPASELEAGQELAAVCAAAYTIELLDTVAL 791
Query: 298 -WQRIIRLDAVRANSEWTIYSPSQAAVSEMKAQRSAQIVGLKDYDHLEPSRIYHAARL-- 354
RI + D R + + ++ S +R I+ ++HL+ + L
Sbjct: 792 NLHRIDK-DVQRCDRNYWYFTTS-------NLERLRDIMCSYVWEHLDMGYVQGMCDLLA 843
Query: 355 -------EDHEAFWCFAGFMKKARHNFRLDEVGIRRQLSIVSKIIKCKDNHLYRHLEQLQ 407
D A+ CF+ MK+ NF + + + +I+ D+ L+ + Q
Sbjct: 844 PLLVILDNDQLAYSCFSHLMKRMGQNFP-SGGAMDSHFANMRSLIQILDSELFELMHQNG 902
Query: 408 AEDCF-FVYRMVVVLFRRELTFEQTLCLWEVIWADQAAIRAGIAKSAWGRMRLRAPPTDD 466
F F YR ++ F+REL +E +WEVIWA R ++
Sbjct: 903 DYTHFYFCYRWFLLDFKRELLYEDVFAVWEVIWA------------------ARRISSEH 944
Query: 467 LLLYAIAACVLQRRKLIIEKYSSMDEIMRECNSMAGHLDVWKLLDDAHDLV 517
+L+ A V R++I + +I++ N A D ++L A DLV
Sbjct: 945 FVLFIALALVEAYREIIRDNNMDFTDIIKFFNERAERHDAQEILRIARDLV 995
>sp|Q8TC07|TBC15_HUMAN TBC1 domain family member 15 OS=Homo sapiens GN=TBC1D15 PE=1 SV=2
Length = 691
Score = 76.3 bits (186), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 20/153 (13%)
Query: 358 EAFWCFAGFMKKARHNFRLDEVGIRRQLSIVSKIIKCKDNHLYRHLEQLQAEDCFFVYRM 417
+AFWCFA +M + NF G++ QL +S +++ D+ +LE + +F +R
Sbjct: 472 DAFWCFASYMDQMHQNFEEQMQGMKTQLIQLSTLLRLLDSGFCSYLESQDSGYLYFCFRW 531
Query: 418 VVVLFRRELTFEQTLCLWEVIWADQAAIRAGIAKSAWGRMRLRAPPTDDLLLYAIAACVL 477
+++ F+RE +F L LWEV+W + P + L A +
Sbjct: 532 LLIRFKREFSFLDILRLWEVMWTEL--------------------PCTNFHLLLCCAILE 571
Query: 478 QRRKLIIEKYSSMDEIMRECNSMAGHLDVWKLL 510
++ I+EK+ +EI++ N ++ +DV +L
Sbjct: 572 SEKQQIMEKHYGFNEILKHINELSMKIDVEDIL 604
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Query: 66 PWSRRRRKHALLPKQWKTFFTPDGKLSEGGVKFLKK-VRSGGVDPSIRAEVWPFLLGVYD 124
P +RR +L ++W +G++ V +K+ + GG+ ++R + W FLLG +
Sbjct: 309 PVVQRREPVSL--EEWTKNIDSEGRIL--NVDNMKQMIFRGGLSHALRKQAWKFLLGYFP 364
Query: 125 LKSSKEERDSVKAEKRKEYENLRKECRKIIHRYEK-SSKLKE 165
S+KEER ++ +K EY ++ + + I EK +S+L++
Sbjct: 365 WDSTKEERTQLQKQKTDEYFRMKLQWKSISQEQEKRNSRLRD 406
>sp|Q9CXF4|TBC15_MOUSE TBC1 domain family member 15 OS=Mus musculus GN=Tbc1d15 PE=1 SV=1
Length = 671
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 77/163 (47%), Gaps = 20/163 (12%)
Query: 358 EAFWCFAGFMKKARHNFRLDEVGIRRQLSIVSKIIKCKDNHLYRHLEQLQAEDCFFVYRM 417
+AFWCFA +M + NF G++ QL +S +++ D+ +LE + +F +R
Sbjct: 455 DAFWCFASYMDQMHQNFEEQMQGMKTQLIQLSTLLRLLDSGFCSYLESQDSGYLYFCFRW 514
Query: 418 VVVLFRRELTFEQTLCLWEVIWADQAAIRAGIAKSAWGRMRLRAPPTDDLLLYAIAACVL 477
+++ F+RE +F L LWEV+W + P + L A +
Sbjct: 515 LLIRFKREFSFLDILRLWEVMWTEL--------------------PCKNFHLLLCCAILE 554
Query: 478 QRRKLIIEKYSSMDEIMRECNSMAGHLDVWKLLDDAHDLVVTL 520
++ I+ K+ +EI++ N ++ +DV +L A + + +
Sbjct: 555 SEKQQIMAKHYGFNEILKHINELSMKIDVEDILCKAEAISLQM 597
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 66 PWSRRRRKHALLPKQWKTFFTPDGKLSEGGVKFLK-KVRSGGVDPSIRAEVWPFLLGVYD 124
P +RR +L ++W P+G+L V+ +K K+ GG+ S+R + W FLLG +
Sbjct: 292 PVVQRREPVSL--EEWNKSLDPEGRLV--AVESMKQKIFRGGLSHSLRKQAWKFLLGYFP 347
Query: 125 LKSSKEERDSVKAEKRKEYENLRKECRKIIHRYEK-SSKLKE 165
S+KEER ++ +K EY ++ + + + EK +S+L++
Sbjct: 348 WDSTKEERTQLQKQKTDEYFRMKLQWKSVSEAQEKRNSRLRD 389
>sp|P48365|GYP7_YEAST GTPase-activating protein GYP7 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=GYP7 PE=1 SV=1
Length = 746
Score = 72.4 bits (176), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 23/165 (13%)
Query: 341 DHLEPSRIYHAARLEDHEAFWCFAGFMKKARHNFRLDEVGIRRQLSIVSKIIKCKDNHLY 400
D L P IY + E+ + FWCF FM NF D+ GI Q+ + ++++ L
Sbjct: 535 DLLSP--IYVIMK-EEWKTFWCFTHFMDIMERNFLRDQSGIHEQMLTLVELVQLMLPELS 591
Query: 401 RHLEQLQAEDCFFVYRMVVVLFRRELTFEQTLCLWEVIWADQAAIRAGIAKSAWGRMRLR 460
HL + + + FF +RM++V F+RE E + +WE W +
Sbjct: 592 EHLNKCDSGNLFFCFRMLLVWFKREFEMEDIMHIWENFWTFYYS---------------- 635
Query: 461 APPTDDLLLYAIAACVLQRRKLIIEKYSSMDEIMRECNSMAGHLD 505
L+ + A + + + I++ + D+I++ N + G LD
Sbjct: 636 ----SQFQLFFMLAILQKNSQAILQHLNQFDQILKFFNELNGKLD 676
Score = 37.0 bits (84), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 71 RRKHALLPKQWKTFFTP-DGKLSEGGVKFLKKVRSGGV-DPSIRAEVWPFLLGVYDLKSS 128
+R+ L +W + + DG+L + + GG+ + S+R +VW FLL +Y SS
Sbjct: 348 QRQFPLTEAKWNSLWDENDGRLRVTVNEVKDFIFHGGLENDSLRGKVWGFLLEIYPWDSS 407
Query: 129 KEERDSVKAEKRKEYENLR 147
++ER + EY+ L+
Sbjct: 408 QDERVQIDQTLAAEYDQLK 426
>sp|Q3MII6|TBC25_HUMAN TBC1 domain family member 25 OS=Homo sapiens GN=TBC1D25 PE=1 SV=2
Length = 688
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 356 DHE--AFWCFAGFMKKARHNFRLDEVGIRRQLSIVSKIIKCKDNHLYRHLEQLQAEDCFF 413
DHE AF CF G MK+ NF D + + + + +++ D Y++L++ A+D FF
Sbjct: 346 DHEGHAFVCFCGIMKRLAANFHPDGRAMATKFAHLKLLLRHADPDFYQYLQEAGADDLFF 405
Query: 414 VYRMVVVLFRRELTFEQTLCLWEVIWA 440
YR +++ +RE F+ L + EV W+
Sbjct: 406 CYRWLLLELKREFAFDDALRMLEVTWS 432
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 80 QWKTFFTPDGKLSEGGVKFLKKVRSGGVDPSIRAEVWPFLLGVYDLKSSKEERDSVKAEK 139
++ T+ +G+LS + ++ GGV+PS+R VW +LL VY + ER K
Sbjct: 203 EFHTYLNHEGQLSRP-EELRLRIYHGGVEPSLRKVVWRYLLNVYPDGLTGRERMDYMKRK 261
Query: 140 RKEYENLRKE 149
+EYE L+ E
Sbjct: 262 SREYEQLKSE 271
>sp|A1A5B6|TBC25_MOUSE TBC1 domain family member 25 OS=Mus musculus GN=Tbc1d25 PE=1 SV=1
Length = 742
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 356 DHE--AFWCFAGFMKKARHNFRLDEVGIRRQLSIVSKIIKCKDNHLYRHLEQLQAEDCFF 413
DHE AF CF G MK+ NF D + + + + +++ D Y++L++ A+D FF
Sbjct: 400 DHEGHAFVCFCGIMKRLAANFHPDGRAMATKFAHLKLLLRHADPDFYQYLQEAGADDLFF 459
Query: 414 VYRMVVVLFRRELTFEQTLCLWEVIWA 440
YR +++ +RE F+ L + EV W+
Sbjct: 460 CYRWLLLELKREFAFDDALRMLEVTWS 486
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 67/148 (45%), Gaps = 19/148 (12%)
Query: 80 QWKTFFTPDGKLSEGGVKFLKKVRSGGVDPSIRAEVWPFLLGVYDLKSSKEERDSVKAEK 139
++ T+ +G+LS + ++ GGV+PS+R VW +LL VY + ER K
Sbjct: 257 EFHTYLNHEGQLSRP-EELRLRIYHGGVEPSLRKVVWRYLLNVYPDGLTGRERMDYMKRK 315
Query: 140 RKEYENLRKECRKIIH----RYEKSSKLKETTGK-------SSNEDSGDLSQVFDSPGLE 188
+EYE L+ E + ++ + +S+ LK+ + ED L + D L
Sbjct: 316 SREYEQLKSEWAQRVNPEDLEFIRSTVLKDVLRTDRAHPYYAGPEDGPHLRALHDL--LT 373
Query: 189 DEASSRRSVS-----SDGGSPVAEDLDH 211
A + VS SD SP+ +DH
Sbjct: 374 TYAVTHPQVSYCQGMSDLASPILAVMDH 401
>sp|Q8BYH7|TBC17_MOUSE TBC1 domain family member 17 OS=Mus musculus GN=Tbc1d17 PE=2 SV=2
Length = 645
Score = 62.8 bits (151), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 20/165 (12%)
Query: 358 EAFWCFAGFMKKARHNFRLDEVGIRRQLSIVSKIIKCKDNHLYRHLEQLQAEDCFFVYRM 417
+AFWCF GFM+ NF + ++RQL + +++ D L L+ + F +R
Sbjct: 436 DAFWCFCGFMELVHGNFEESQETMKRQLGQLLLLLRVLDQPLCDFLDSQDSGSLCFCFRW 495
Query: 418 VVVLFRRELTFEQTLCLWEVIWADQAAIRAGIAKSAWGRMRLRAPPTDDLLLYAIAACVL 477
+++ F+RE F L LWEV+W P + LL A A +
Sbjct: 496 LLIWFKREFPFPDVLRLWEVLWTG-------------------LPGPNLHLLVACAILDM 536
Query: 478 QRRKLIIEKYSSMDEIMRECNSMAGHLDVWKLLDDAHDLVVTLHA 522
+R L++ + S +EI++ N + L V +L A L L A
Sbjct: 537 ERDTLMLSGFGS-NEILKHINELTMKLSVEDVLTRAEALYRQLTA 580
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 79 KQWKTFFTPDGKLSEGGVKFLK-KVRSGGVDPSIRAEVWPFLLGVYDLKSSKEERDSVKA 137
++W + P+G+L V LK ++ SGG+ P +R E W FLLG +SS EE +
Sbjct: 284 EEWNRYVGPEGRLQ--NVPELKNRIFSGGLSPGLRREAWKFLLGYLSWESSAEEHKAHVR 341
Query: 138 EKRKEYENLRKECRKIIHRYEKSSKL 163
+K EY ++ + + + E+ + L
Sbjct: 342 KKTDEYFRMKLQWKSVSAEQERRNSL 367
>sp|Q9HA65|TBC17_HUMAN TBC1 domain family member 17 OS=Homo sapiens GN=TBC1D17 PE=1 SV=2
Length = 648
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 20/159 (12%)
Query: 358 EAFWCFAGFMKKARHNFRLDEVGIRRQLSIVSKIIKCKDNHLYRHLEQLQAEDCFFVYRM 417
+AFWCF GFM+ + NF + ++RQL + +++ D L L+ + F +R
Sbjct: 436 DAFWCFCGFMELVQGNFEESQETMKRQLGRLLLLLRVLDPLLCDFLDSQDSGSLCFCFRW 495
Query: 418 VVVLFRRELTFEQTLCLWEVIWADQAAIRAGIAKSAWGRMRLRAPPTDDLLLYAIAACVL 477
+++ F+RE F L LWEV+W P + LL A A +
Sbjct: 496 LLIWFKREFPFPDVLRLWEVLWTG-------------------LPGPNLHLLVACAILDM 536
Query: 478 QRRKLIIEKYSSMDEIMRECNSMAGHLDVWKLLDDAHDL 516
+R L++ + S +EI++ N + L V +L A L
Sbjct: 537 ERDTLMLSGFGS-NEILKHINELTMKLSVEDVLTRAEAL 574
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 79 KQWKTFFTPDGKLSEGGVKFLK-KVRSGGVDPSIRAEVWPFLLGVYDLKSSKEERDSVKA 137
++W P+G+L + V LK ++ SGG+ PS+R E W FLLG + + EE +
Sbjct: 284 EEWARHVGPEGRLQQ--VPELKNRIFSGGLSPSLRREAWKFLLGYLSWEGTAEEHKAHIR 341
Query: 138 EKRKEYENLRKECRKIIHRYEKSSKL 163
+K EY ++ + + + E+ + L
Sbjct: 342 KKTDEYFRMKLQWKSVSPEQERRNSL 367
>sp|Q8TBP0|TBC16_HUMAN TBC1 domain family member 16 OS=Homo sapiens GN=TBC1D16 PE=2 SV=1
Length = 767
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 38/53 (71%)
Query: 97 KFLKKVRSGGVDPSIRAEVWPFLLGVYDLKSSKEERDSVKAEKRKEYENLRKE 149
K K + GG+D SIR EVWPFLL Y +S+ EER++++ +KRKEY ++++
Sbjct: 416 KLRKAIFFGGIDVSIRGEVWPFLLRYYSHESTSEEREALRLQKRKEYSEIQQK 468
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 97/239 (40%), Gaps = 45/239 (18%)
Query: 282 KADGNSKFYTDEDFATWQRIIRLDAVRANSEWTIYSPSQAAVSEMKAQRSAQIVGLKDYD 341
+ D N++F+ ED + + R+ + +Y+P+ S+ + A I+
Sbjct: 494 RTDRNNQFFRGEDNPNVESMRRILL-----NYAVYNPA-VGYSQGMSDLVAPIL------ 541
Query: 342 HLEPSRIYHAARLEDHEAFWCFAGFMKKARHNFRLDEVGIRRQLSIVSKIIKCKDNHLYR 401
A L++ + FWCF G M+ + + +QL + ++++ Y+
Sbjct: 542 ---------AEVLDESDTFWCFVGLMQNTIFVSSPRDEDMEKQLLYLRELLRLTHVRFYQ 592
Query: 402 HLEQLQAED---CFFVYRMVVVLFRRELTFEQTLCLWEVIWADQAAIRAGIAKSAWGRMR 458
HL L ED F +R +++ F+RE + L +WE WA
Sbjct: 593 HLVSL-GEDGLQMLFCHRWLLLCFKREFPEAEALRIWEACWAHYQ--------------- 636
Query: 459 LRAPPTDDLLLYAIAACVLQRRKLIIEKYSSMDEIMRECNSMAGHLDVWKLLDDAHDLV 517
TD L+ A V +IE+ + D+++ ++A H++ +L A L+
Sbjct: 637 -----TDYFHLFICVAIVAIYGDDVIEQQLATDQMLLHFGNLAMHMNGELVLRKARSLL 690
>sp|Q2NKQ1|SGSM1_HUMAN Small G protein signaling modulator 1 OS=Homo sapiens GN=SGSM1 PE=1
SV=2
Length = 1148
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 69/167 (41%), Gaps = 20/167 (11%)
Query: 359 AFWCFAGFMKKARHNFRLDEVGIRRQLSIVSKIIKCKDNHLYRHLEQL-QAEDCFFVYRM 417
AF CF MK+ NF + + + +I+ D+ L+ + Q +F YR
Sbjct: 998 AFSCFTELMKRMNQNFP-HGGAMDTHFANMRSLIQILDSELFELMHQNGDYTHFYFCYRW 1056
Query: 418 VVVLFRRELTFEQTLCLWEVIWADQAAIRAGIAKSAWGRMRLRAPPTDDLLLYAIAACVL 477
++ F+REL ++ +WE IWA + A +L+ A V
Sbjct: 1057 FLLDFKRELVYDDVFLVWETIWAAKHVSSA------------------HYVLFIALALVE 1098
Query: 478 QRRKLIIEKYSSMDEIMRECNSMAGHLDVWKLLDDAHDLVVTLHAKI 524
R +I+E +I++ N MA + ++L A DLV + I
Sbjct: 1099 VYRDIILENNMDFTDIIKFFNEMAERHNTKQVLKLARDLVYKVQTLI 1145
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 97 KFLKKVRSGGVDPSIRAEVWPFLLGVYDLKSSKEERDSVKAEKRKEYENLRKE---CRKI 153
+ L+ + GG+ P IR VWPFLLG Y ++ ER V + Y E C I
Sbjct: 608 ELLRLIYYGGIQPEIRKAVWPFLLGHYQFGMTETERKEVDEQIHACYAQTMAEWLGCEAI 667
Query: 154 IHRYEKSS 161
+ + E+ S
Sbjct: 668 VRQRERES 675
>sp|Q8BPQ7|SGSM1_MOUSE Small G protein signaling modulator 1 OS=Mus musculus GN=Sgsm1 PE=2
SV=2
Length = 1093
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 67/160 (41%), Gaps = 20/160 (12%)
Query: 359 AFWCFAGFMKKARHNFRLDEVGIRRQLSIVSKIIKCKDNHLYRHLEQLQAEDCF-FVYRM 417
AF CF MK+ NF + + + +I+ D+ L+ + Q F F YR
Sbjct: 943 AFSCFTELMKRMNQNFP-HGGAMDTHFANMRSLIQILDSELFELMHQNGDYTHFYFCYRW 1001
Query: 418 VVVLFRRELTFEQTLCLWEVIWADQAAIRAGIAKSAWGRMRLRAPPTDDLLLYAIAACVL 477
++ F+REL ++ +WE IWA + A +L+ A V
Sbjct: 1002 FLLDFKRELVYDDVFSVWETIWAAKHVSSA------------------HYVLFIALALVE 1043
Query: 478 QRRKLIIEKYSSMDEIMRECNSMAGHLDVWKLLDDAHDLV 517
R +I+E +I++ N MA + ++L A DLV
Sbjct: 1044 VYRDIILENNMDFTDIIKFFNEMAERHNAKQILQLARDLV 1083
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 97 KFLKKVRSGGVDPSIRAEVWPFLLGVYDLKSSKEERDSVKAEKRKEYENLRKE---CRKI 153
+ L+ + GGV P IR VWPFLLG Y ++ ER V + Y E C I
Sbjct: 553 ELLRLIYYGGVQPEIRRAVWPFLLGHYQFGMTEMERKEVDEQIHACYAQTMSEWLGCEAI 612
Query: 154 IHRYEKSS 161
+ + E+ S
Sbjct: 613 VRQRERES 620
>sp|Q8IYX1|TBC21_HUMAN TBC1 domain family member 21 OS=Homo sapiens GN=TBC1D21 PE=2 SV=1
Length = 336
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 3/117 (2%)
Query: 71 RRKHALLPKQWKTFFTPDGKLSEGGVKFLKKVRSGGVDPSIRAEVWPFLLGVYDLKSSKE 130
+RK + +W +FF G L++ + G+ P +R E W FL G + +SS++
Sbjct: 22 KRKPPIDKTEWDSFFDESGHLAKSRDFICVNILERGLHPFVRTEAWKFLTGYFSWQSSQD 81
Query: 131 ERDSVKAEKRKEYENLRKECRKIIHRYEKSSKLKETTGKSSNEDSGDLSQVFDSPGL 187
ER +V + +RK Y+ L + KI E L ++ N + D+ +++D L
Sbjct: 82 ERLTVDSMRRKNYKALCQMYEKIQPLLE---NLHRNFTETRNNIARDIQKIYDKDPL 135
Score = 40.0 bits (92), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 65/158 (41%), Gaps = 22/158 (13%)
Query: 344 EPSRIYHAARLEDHEAFWCFAGFMKKARHNFRLDEVGIRRQLSIVSKIIKCKDNHLYRHL 403
E ++ DHE FW F F++K H+ ++ +G+ + L ++S +I D HL
Sbjct: 167 EMMMLFQLMVEHDHETFWLFQFFLQKTEHSCVIN-IGVAKNLDMLSTLITFLDPVFAEHL 225
Query: 404 EQLQAEDCFFVYRMVVVLFRREL-TFEQTLCLWEVIWADQAAIRAGIAKSAWGRMRLRAP 462
+ A ++ F+R +F+ LWEV+ L
Sbjct: 226 KGKGAGAVQSLFPWFCFCFQRAFKSFDDVWRLWEVL--------------------LTGK 265
Query: 463 PTDDLLLYAIAACVLQRRKLIIEKYSSMDEIMRECNSM 500
P + + + + R+ ++++ D+I+ CN++
Sbjct: 266 PCRNFQVLVAYSMLQMVREQVLQESMGGDDILLACNNL 303
>sp|Q08484|GYP1_YEAST GTPase-activating protein GYP1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=GYP1 PE=1 SV=1
Length = 637
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Query: 337 LKDYDHLEPSRIYHAARLEDHEA--FWCFAGFMKKARHNFRLDEVGIRRQLSIVSKIIKC 394
+ D + +PS ++ D EA FWC +++ N+ + GI RQ+ +S+++K
Sbjct: 401 IDDVEIKDPSTYMVDEQITDLEADTFWCLTKLLEQITDNYIHGQPGILRQVKNLSQLVKR 460
Query: 395 KDNHLYRHLEQLQAEDCFFVYRMVVVLFRRELTFEQTLCLWEV 437
D LY H + E F +R + L RE + +W+
Sbjct: 461 IDADLYNHFQNEHVEFIQFAFRWMNCLLMREFQMGTVIRMWDT 503
>sp|Q9NVG8|TBC13_HUMAN TBC1 domain family member 13 OS=Homo sapiens GN=TBC1D13 PE=1 SV=3
Length = 400
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 358 EAFWCFAGFMKKARHNF--RLD--EVGIRRQLSIVSKIIKCKDNHLYRHLEQLQAEDCFF 413
+ F+CF M + R NF LD + GI ++ V +K KD LY L++ + FF
Sbjct: 257 DTFFCFTNLMAEIRDNFIKSLDDSQCGITYKMEKVYSTLKDKDVELYLKLQEQNIKPQFF 316
Query: 414 VYRMVVVLFRRELTFEQTLCLWEVIWAD 441
+R + +L +E + +W+ ++AD
Sbjct: 317 AFRWLTLLLSQEFLLPDVIRIWDSLFAD 344
>sp|Q95KI1|TB22A_MACFA TBC1 domain family member 22A (Fragment) OS=Macaca fascicularis
GN=TBC1D22A PE=2 SV=2
Length = 497
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/148 (19%), Positives = 63/148 (42%), Gaps = 19/148 (12%)
Query: 358 EAFWCFAGFMKKARHNFRLDEVGIRRQLSIVSKIIKCKDNHLYRHLEQLQAEDCFFVYRM 417
+ +WC + + + N+ + GI+ ++ ++ +++ D ++RHL+Q + F +R
Sbjct: 342 DTYWCMSKLLDGIQDNYTFAQPGIQMKVKMLEELVSRIDEQVHRHLDQHEVRYLQFAFRW 401
Query: 418 VVVLFRRELTFEQTLCLWEVIWADQAAIRAGIAKSAWGRMRLRAPPTDDLLLYAIAACVL 477
+ L RE+ T+ LW+ ++ LY AA ++
Sbjct: 402 MNNLLMREVPLRCTIRLWDTYQSEPEGF-------------------SHFHLYVCAAFLV 442
Query: 478 QRRKLIIEKYSSMDEIMRECNSMAGHLD 505
+ RK I+E+ + ++ N H D
Sbjct: 443 RWRKEILEEKDFQELLLFLQNLPTAHWD 470
>sp|Q8WUA7|TB22A_HUMAN TBC1 domain family member 22A OS=Homo sapiens GN=TBC1D22A PE=1 SV=2
Length = 517
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/148 (19%), Positives = 63/148 (42%), Gaps = 19/148 (12%)
Query: 358 EAFWCFAGFMKKARHNFRLDEVGIRRQLSIVSKIIKCKDNHLYRHLEQLQAEDCFFVYRM 417
+ +WC + + + N+ + GI+ ++ ++ +++ D ++RHL+Q + F +R
Sbjct: 362 DTYWCMSKLLDGIQDNYTFAQPGIQMKVKMLEELVSRIDEQVHRHLDQHEVRYLQFAFRW 421
Query: 418 VVVLFRRELTFEQTLCLWEVIWADQAAIRAGIAKSAWGRMRLRAPPTDDLLLYAIAACVL 477
+ L RE+ T+ LW+ ++ LY AA ++
Sbjct: 422 MNNLLMREVPLRCTIRLWDTYQSEPDGF-------------------SHFHLYVCAAFLV 462
Query: 478 QRRKLIIEKYSSMDEIMRECNSMAGHLD 505
+ RK I+E+ + ++ N H D
Sbjct: 463 RWRKEILEEKDFQELLLFLQNLPTAHWD 490
>sp|Q8R3D1|TBC13_MOUSE TBC1 domain family member 13 OS=Mus musculus GN=Tbc1d13 PE=2 SV=1
Length = 400
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 358 EAFWCFAGFMKKARHNF--RLD--EVGIRRQLSIVSKIIKCKDNHLYRHLEQLQAEDCFF 413
+ F+CF M + R NF LD + GI ++ V +K KD LY L++ + FF
Sbjct: 257 DTFFCFTNLMAEIRDNFIKSLDDSQCGITYKMEKVYSTLKDKDVELYLKLQEQSIKPQFF 316
Query: 414 VYRMVVVLFRRELTFEQTLCLWEVIWAD 441
+R + +L +E + +W+ ++AD
Sbjct: 317 AFRWLTLLLSQEFLLPDVIRIWDSLFAD 344
>sp|O59737|GYP1_SCHPO GTPase-activating protein gyp1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=gyp1 PE=3 SV=1
Length = 514
Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 43/84 (51%)
Query: 358 EAFWCFAGFMKKARHNFRLDEVGIRRQLSIVSKIIKCKDNHLYRHLEQLQAEDCFFVYRM 417
+A+WC + + + N+ + GIRRQ++ + ++ D L +HL+ + F +R
Sbjct: 359 DAYWCLSKLLDGIQDNYIHAQPGIRRQVNNLRELTLRIDEPLVKHLQMEGVDFLQFSFRW 418
Query: 418 VVVLFRRELTFEQTLCLWEVIWAD 441
+ L REL+ + +W+ A+
Sbjct: 419 MNCLLMRELSISNIIRMWDTYMAE 442
>sp|Q95LL3|TB22B_MACFA TBC1 domain family member 22B OS=Macaca fascicularis GN=TBC1D22B
PE=2 SV=1
Length = 505
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 41/80 (51%)
Query: 358 EAFWCFAGFMKKARHNFRLDEVGIRRQLSIVSKIIKCKDNHLYRHLEQLQAEDCFFVYRM 417
++FWC + + + N+ + GI++++ + +++ D ++ H + + E F +R
Sbjct: 350 DSFWCMSKLLDGIQDNYTFAQPGIQKKVKALEELVSRIDEQVHNHFRRYEVEYLQFAFRW 409
Query: 418 VVVLFRRELTFEQTLCLWEV 437
+ L REL T+ LW+
Sbjct: 410 MNNLLMRELPLRCTIRLWDT 429
>sp|Q9NU19|TB22B_HUMAN TBC1 domain family member 22B OS=Homo sapiens GN=TBC1D22B PE=1 SV=3
Length = 505
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 41/80 (51%)
Query: 358 EAFWCFAGFMKKARHNFRLDEVGIRRQLSIVSKIIKCKDNHLYRHLEQLQAEDCFFVYRM 417
++FWC + + + N+ + GI++++ + +++ D ++ H + + E F +R
Sbjct: 350 DSFWCMSKLLDGIQDNYTFAQPGIQKKVKALEELVSRIDEQVHNHFRRYEVEYLQFAFRW 409
Query: 418 VVVLFRRELTFEQTLCLWEV 437
+ L REL T+ LW+
Sbjct: 410 MNNLLMRELPLRCTIRLWDT 429
>sp|Q8R5A6|TB22A_MOUSE TBC1 domain family member 22A OS=Mus musculus GN=Tbc1d22a PE=2 SV=3
Length = 516
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 41/80 (51%)
Query: 358 EAFWCFAGFMKKARHNFRLDEVGIRRQLSIVSKIIKCKDNHLYRHLEQLQAEDCFFVYRM 417
+ +WC + + + N+ + GI+ ++ ++ +++ D ++RHL+ + F +R
Sbjct: 361 DTYWCMSKLLDGIQDNYTFAQPGIQMKVKMLEELVSRIDERVHRHLDGHEVRYLQFAFRW 420
Query: 418 VVVLFRRELTFEQTLCLWEV 437
+ L REL T+ LW+
Sbjct: 421 MNNLLMRELPLRCTIRLWDT 440
>sp|Q54TA5|TBC5B_DICDI TBC1 domain family member 5 homolog B OS=Dictyostelium discoideum
GN=tbc1d5B PE=3 SV=1
Length = 1016
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%)
Query: 387 IVSKIIKCKDNHLYRHLEQLQAEDCFFVYRMVVVLFRRELTFEQTLCLWEVIWA 440
I S ++K KD LY+HL+ L E ++ R + +LF RE F+ L +W+ ++A
Sbjct: 581 IHSILLKQKDFELYQHLDSLDIEPQIYLLRWIRLLFGREFHFDDVLNIWDALFA 634
>sp|Q9URY3|YLOH_SCHPO TBC domain-containing protein C1952.17c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC1952.17c PE=4
SV=4
Length = 619
Score = 39.3 bits (90), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 11/143 (7%)
Query: 349 YHAARLEDHEAFWCFAGFMKKARHNFR--LD---EVGIRRQLSIVSKIIKCKDNHLYRHL 403
Y L + +AF+ F M + R + LD + GI +S ++ +K D L+ +L
Sbjct: 289 YENYYLCECDAFFLFTQMMVQVRDLYEKTLDHDSDHGIHFLMSKFTERLKKYDYELWENL 348
Query: 404 EQLQAEDCFFVYRMVVVLFRRELTFEQTLCLWEVIWADQAAIRAGIAKSAWGRMRLRAPP 463
E+ Q ++ +R L +E + LW+ I ADQ R +G+
Sbjct: 349 EEKQIHPTYYSFRWFTCLLSQEFPLPDVIRLWDSIIADQMKAR------LFGKNDDGFNG 402
Query: 464 TDDLLLYAIAACVLQRRKLIIEK 486
D L+ + +++ R+ I+E+
Sbjct: 403 AYDFLMDFCCSILIELRESILER 425
>sp|Q92609|TBCD5_HUMAN TBC1 domain family member 5 OS=Homo sapiens GN=TBC1D5 PE=1 SV=1
Length = 795
Score = 38.9 bits (89), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 385 LSIVSKIIKCKDN-------HLYRHLEQLQAEDCFFVYRMVVVLFRRELTFEQTLCLWEV 437
++IV+K+ + +D+ LY HL +L+ + R V +LF RE + L +W+
Sbjct: 295 IAIVTKVNQIQDHLLKKHDIELYMHLNRLEIAPQIYGLRWVRLLFGREFPLQDLLVVWDA 354
Query: 438 IWAD 441
++AD
Sbjct: 355 LFAD 358
>sp|Q80XQ2|TBCD5_MOUSE TBC1 domain family member 5 OS=Mus musculus GN=Tbc1d5 PE=1 SV=2
Length = 815
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 387 IVSKIIKCKDNHLYRHLEQLQAEDCFFVYRMVVVLFRRELTFEQTLCLWEVIWAD 441
I ++K D LY HL +L+ + R V +LF RE + L +W+ ++AD
Sbjct: 304 IQDHLLKKHDIELYMHLNRLEIAPQIYGLRWVRLLFGREFPLQDLLVVWDALFAD 358
>sp|Q81258|POLG_HCVNZ Genome polyprotein OS=Hepatitis C virus genotype 3a (isolate NZL1)
PE=1 SV=3
Length = 3021
Score = 35.8 bits (81), Expect = 0.94, Method: Composition-based stats.
Identities = 38/134 (28%), Positives = 54/134 (40%), Gaps = 12/134 (8%)
Query: 160 SSKLKETTGKSSNED--SGDLSQVFDSPGLEDEASSRRSVSSDGGSPVAEDLDHPVYDQS 217
SSK +E SS D S S+V SPG E ++ S S+ G P DL
Sbjct: 2360 SSKPQEENSSSSGVDTQSSTTSKVPPSPGGESDSESCSSMPPLEGEPGDPDL-------- 2411
Query: 218 PECSGLLEGEDERDKSVLTCEDASAGDTESTDSDSSEDLENIPLLSVEGAEARHENPKES 277
C D ++SV+ C S T + + S + E +P+ + + RH N S
Sbjct: 2412 -SCDSWSTVSDSEEQSVVCCS-MSYSWTGALITPCSAEEEKLPISPLSNSLLRHHNLVYS 2469
Query: 278 SSLSKADGNSKFYT 291
+S A K T
Sbjct: 2470 TSSRSASQRQKKVT 2483
>sp|Q84BU4|DNAK_LACAC Chaperone protein DnaK OS=Lactobacillus acidophilus (strain ATCC
700396 / NCK56 / N2 / NCFM) GN=dnaK PE=3 SV=1
Length = 614
Score = 35.0 bits (79), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 138 EKRKEYENLRKECRKIIHRYEKSSKLKETTGKSSNEDSGDLSQVFD 183
+KRK+ +LR E ++I EK+ LKET GK S+ED+ + + D
Sbjct: 498 KKRKDEADLRNEVDQLIFTTEKT--LKETKGKVSDEDTKKVQEALD 541
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.129 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 193,311,637
Number of Sequences: 539616
Number of extensions: 8015007
Number of successful extensions: 49442
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 130
Number of HSP's successfully gapped in prelim test: 371
Number of HSP's that attempted gapping in prelim test: 42691
Number of HSP's gapped (non-prelim): 4082
length of query: 524
length of database: 191,569,459
effective HSP length: 122
effective length of query: 402
effective length of database: 125,736,307
effective search space: 50545995414
effective search space used: 50545995414
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)