Query 009814
Match_columns 524
No_of_seqs 404 out of 2683
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 13:35:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009814.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009814hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3nva_A CTP synthase; rossman f 100.0 1E-193 4E-198 1544.3 36.8 504 1-523 3-510 (535)
2 1vco_A CTP synthetase; tetrame 100.0 1E-159 4E-164 1298.1 36.5 503 1-523 12-521 (550)
3 1s1m_A CTP synthase; CTP synth 100.0 7E-158 3E-162 1282.3 36.5 500 1-523 3-514 (545)
4 2c5m_A CTP synthase; cytidine 100.0 2E-145 7E-150 1067.3 20.3 272 1-272 23-294 (294)
5 2vo1_A CTP synthase 1; pyrimid 100.0 1E-143 3E-148 1063.4 18.6 273 1-273 23-295 (295)
6 2v4u_A CTP synthase 2; pyrimid 100.0 1.2E-40 4E-45 337.8 17.6 240 283-523 11-252 (289)
7 2w7t_A CTP synthetase, putativ 100.0 3.6E-37 1.2E-41 309.8 16.2 218 297-523 8-232 (273)
8 1a9x_B Carbamoyl phosphate syn 100.0 1.8E-36 6.1E-41 317.6 10.2 270 178-523 51-351 (379)
9 3fij_A LIN1909 protein; 11172J 99.8 8E-20 2.7E-24 181.3 18.0 183 297-523 4-217 (254)
10 4gud_A Imidazole glycerol phos 99.8 2.9E-19 1E-23 171.1 9.3 176 299-523 4-184 (211)
11 1qdl_B Protein (anthranilate s 99.8 3.5E-18 1.2E-22 162.6 15.0 162 300-523 4-174 (195)
12 2a9v_A GMP synthase; structura 99.8 2.6E-18 9E-23 166.1 13.4 165 296-523 12-178 (212)
13 1l9x_A Gamma-glutamyl hydrolas 99.7 9.3E-18 3.2E-22 171.8 12.3 182 297-523 30-240 (315)
14 2vpi_A GMP synthase; guanine m 99.7 8.3E-18 2.8E-22 163.5 10.4 162 298-523 25-188 (218)
15 1wl8_A GMP synthase [glutamine 99.7 5E-17 1.7E-21 153.4 14.9 161 299-523 2-165 (189)
16 1o1y_A Conserved hypothetical 99.7 1.5E-16 5.2E-21 156.5 16.0 167 295-523 10-184 (239)
17 3uow_A GMP synthetase; structu 99.7 1E-16 3.6E-21 175.6 13.0 185 298-523 8-208 (556)
18 1i1q_B Anthranilate synthase c 99.7 2.1E-15 7.3E-20 142.8 17.0 165 298-523 1-168 (192)
19 3tqi_A GMP synthase [glutamine 99.6 4.4E-16 1.5E-20 169.7 12.1 166 298-523 11-183 (527)
20 3r75_A Anthranilate/para-amino 99.6 3.1E-16 1.1E-20 174.4 10.5 160 298-523 447-612 (645)
21 2ywj_A Glutamine amidotransfer 99.6 1E-15 3.4E-20 143.9 10.7 159 298-523 1-164 (186)
22 3m3p_A Glutamine amido transfe 99.6 2.3E-15 7.9E-20 149.5 13.6 166 299-523 5-175 (250)
23 1gpm_A GMP synthetase, XMP ami 99.6 6.9E-16 2.4E-20 168.0 10.2 162 298-523 8-180 (525)
24 1gpw_B Amidotransferase HISH; 99.6 8.3E-16 2.9E-20 146.2 8.7 162 298-523 1-177 (201)
25 2ywb_A GMP synthase [glutamine 99.6 6.5E-16 2.2E-20 167.3 8.6 159 300-523 2-163 (503)
26 3l7n_A Putative uncharacterize 99.6 1E-14 3.4E-19 142.9 14.7 165 299-523 2-178 (236)
27 3d54_D Phosphoribosylformylgly 99.6 1.2E-14 4.3E-19 138.6 14.5 164 298-523 3-185 (213)
28 2vxo_A GMP synthase [glutamine 99.6 4E-15 1.4E-19 166.8 10.3 161 298-523 30-193 (697)
29 2ywd_A Glutamine amidotransfer 99.5 1.4E-13 4.8E-18 129.3 10.3 160 298-523 3-171 (191)
30 1ka9_H Imidazole glycerol phos 99.4 2.3E-13 7.7E-18 129.6 10.3 164 298-523 3-177 (200)
31 1q7r_A Predicted amidotransfer 99.4 1.7E-13 5.7E-18 132.6 9.4 163 296-523 22-191 (219)
32 2iss_D Glutamine amidotransfer 99.4 4.3E-13 1.5E-17 128.6 10.9 89 295-411 18-111 (208)
33 2nv0_A Glutamine amidotransfer 99.4 5.9E-13 2E-17 126.0 11.0 163 298-523 2-169 (196)
34 1jvn_A Glutamine, bifunctional 99.2 6.5E-12 2.2E-16 137.6 6.4 179 297-523 4-195 (555)
35 2abw_A PDX2 protein, glutamina 99.1 1.2E-10 4E-15 112.9 6.3 88 297-412 3-101 (227)
36 2h2w_A Homoserine O-succinyltr 98.6 1.1E-06 3.6E-11 90.0 16.0 129 360-523 109-245 (312)
37 2vdj_A Homoserine O-succinyltr 98.6 9.9E-07 3.4E-11 89.8 15.6 130 360-523 97-234 (301)
38 3ugj_A Phosphoribosylformylgly 98.5 2.1E-06 7.2E-11 102.0 17.0 89 297-405 1047-1150(1303)
39 3l4e_A Uncharacterized peptida 98.4 2.9E-07 1E-11 88.7 6.3 92 297-405 27-127 (206)
40 1fy2_A Aspartyl dipeptidase; s 98.4 1.8E-07 6.3E-12 91.2 4.2 88 297-405 31-127 (229)
41 1oi4_A Hypothetical protein YH 97.6 0.00014 4.9E-09 68.4 8.6 101 297-407 23-134 (193)
42 3l18_A Intracellular protease 97.1 0.0019 6.3E-08 58.8 9.3 99 298-405 3-109 (168)
43 3qxc_A Dethiobiotin synthetase 96.8 0.0047 1.6E-07 60.6 9.5 171 1-219 21-199 (242)
44 4dzz_A Plasmid partitioning pr 96.7 0.0046 1.6E-07 56.9 8.4 97 1-165 1-97 (206)
45 2rk3_A Protein DJ-1; parkinson 96.3 0.0078 2.7E-07 56.3 7.5 100 299-406 5-114 (197)
46 3of5_A Dethiobiotin synthetase 96.3 0.0084 2.9E-07 58.0 7.9 169 1-219 4-179 (228)
47 4hcj_A THIJ/PFPI domain protei 96.1 0.0049 1.7E-07 57.6 4.8 45 361-405 68-115 (177)
48 2ab0_A YAJL; DJ-1/THIJ superfa 95.9 0.013 4.4E-07 55.4 6.8 98 299-405 4-114 (205)
49 4e08_A DJ-1 beta; flavodoxin-l 95.8 0.027 9.1E-07 52.3 8.7 100 299-406 7-115 (190)
50 3er6_A Putative transcriptiona 95.7 0.022 7.7E-07 54.0 7.7 48 359-406 71-123 (209)
51 3fgn_A Dethiobiotin synthetase 95.6 0.02 7E-07 56.3 7.3 167 1-218 26-195 (251)
52 1xjc_A MOBB protein homolog; s 95.4 0.018 6.1E-07 53.6 5.5 44 1-46 4-48 (169)
53 2vrn_A Protease I, DR1199; cys 95.4 0.0094 3.2E-07 55.2 3.6 102 297-406 9-123 (190)
54 1hyq_A MIND, cell division inh 95.2 0.11 3.9E-06 49.7 11.0 41 1-42 2-42 (263)
55 3efe_A THIJ/PFPI family protei 95.2 0.028 9.7E-07 53.4 6.6 44 362-405 74-119 (212)
56 2fex_A Conserved hypothetical 95.1 0.0087 3E-07 55.5 2.7 44 362-405 63-108 (188)
57 3cne_A Putative protease I; st 95.1 0.018 6.1E-07 52.6 4.7 46 361-406 65-119 (175)
58 3l3b_A ES1 family protein; ssg 95.1 0.015 5.3E-07 56.9 4.5 48 361-408 106-168 (242)
59 3f5d_A Protein YDEA; unknow pr 95.0 0.035 1.2E-06 52.8 6.6 46 361-406 62-108 (206)
60 3gra_A Transcriptional regulat 94.8 0.035 1.2E-06 52.4 5.9 46 360-406 69-116 (202)
61 2xxa_A Signal recognition part 94.7 0.25 8.6E-06 52.3 12.9 41 2-44 101-142 (433)
62 2g0t_A Conserved hypothetical 94.7 0.018 6.2E-07 59.6 3.8 41 1-42 169-209 (350)
63 2xj4_A MIPZ; replication, cell 94.6 0.23 7.8E-06 48.8 11.4 40 2-42 5-44 (286)
64 1vhq_A Enhancing lycopene bios 94.6 0.023 7.7E-07 54.8 4.0 47 361-407 89-149 (232)
65 3en0_A Cyanophycinase; serine 94.5 0.075 2.6E-06 53.6 7.7 108 282-405 43-159 (291)
66 1u9c_A APC35852; structural ge 94.3 0.029 9.9E-07 53.3 4.1 45 361-405 88-136 (224)
67 3fse_A Two-domain protein cont 94.0 0.09 3.1E-06 54.6 7.4 101 297-405 10-119 (365)
68 3dm5_A SRP54, signal recogniti 94.0 0.42 1.4E-05 50.9 12.6 40 2-43 101-140 (443)
69 3ea0_A ATPase, para family; al 93.9 0.11 3.7E-06 49.0 7.1 41 1-42 4-45 (245)
70 3noq_A THIJ/PFPI family protei 93.8 0.048 1.7E-06 52.7 4.5 46 360-405 63-111 (231)
71 3kl4_A SRP54, signal recogniti 93.6 0.7 2.4E-05 49.0 13.5 39 2-42 98-136 (433)
72 3kjh_A CO dehydrogenase/acetyl 93.6 0.18 6.1E-06 47.2 8.1 39 1-42 1-39 (254)
73 3ej6_A Catalase-3; heme, hydro 93.3 0.33 1.1E-05 54.2 10.6 95 298-405 538-644 (688)
74 1rw7_A YDR533CP; alpha-beta sa 93.2 0.033 1.1E-06 54.0 2.4 45 361-405 97-145 (243)
75 3ttv_A Catalase HPII; heme ori 93.2 0.1 3.4E-06 58.9 6.4 99 298-405 601-706 (753)
76 3n7t_A Macrophage binding prot 92.9 0.05 1.7E-06 53.4 3.1 45 361-405 104-152 (247)
77 3uk7_A Class I glutamine amido 92.9 0.07 2.4E-06 55.2 4.3 46 361-406 281-329 (396)
78 3kkl_A Probable chaperone prot 92.6 0.055 1.9E-06 52.9 3.0 45 361-405 97-145 (244)
79 3mgk_A Intracellular protease/ 92.4 0.056 1.9E-06 51.4 2.6 45 361-405 64-111 (211)
80 3end_A Light-independent proto 92.2 0.19 6.7E-06 49.5 6.4 43 1-45 41-83 (307)
81 3uk7_A Class I glutamine amido 91.8 0.1 3.5E-06 54.0 4.0 47 361-407 88-137 (396)
82 3ot1_A 4-methyl-5(B-hydroxyeth 91.8 0.054 1.9E-06 51.2 1.7 99 298-405 10-119 (208)
83 1n57_A Chaperone HSP31, protei 91.3 0.073 2.5E-06 53.3 2.1 46 360-405 143-192 (291)
84 3ewn_A THIJ/PFPI family protei 91.3 0.11 3.9E-06 51.0 3.5 44 362-405 84-131 (253)
85 2ffh_A Protein (FFH); SRP54, s 90.5 2.1 7.2E-05 45.2 12.5 40 2-43 99-138 (425)
86 2iuf_A Catalase; oxidoreductas 90.5 0.53 1.8E-05 52.7 8.3 95 298-405 530-646 (688)
87 3q9l_A Septum site-determining 90.4 0.36 1.2E-05 45.8 6.0 40 1-41 2-41 (260)
88 1g3q_A MIND ATPase, cell divis 90.4 0.38 1.3E-05 45.1 6.0 41 1-42 2-42 (237)
89 4gdh_A DJ-1, uncharacterized p 90.0 0.35 1.2E-05 45.2 5.5 44 360-403 71-119 (194)
90 1np6_A Molybdopterin-guanine d 89.7 0.42 1.4E-05 44.2 5.7 44 1-46 6-50 (174)
91 1sy7_A Catalase 1; heme oxidat 89.2 0.62 2.1E-05 52.5 7.5 101 298-408 535-645 (715)
92 1ihu_A Arsenical pump-driving 89.0 0.33 1.1E-05 52.8 5.1 42 3-45 328-369 (589)
93 3k9g_A PF-32 protein; ssgcid, 88.2 0.56 1.9E-05 45.0 5.6 42 1-44 27-68 (267)
94 2ph1_A Nucleotide-binding prot 87.7 0.63 2.2E-05 44.8 5.6 42 1-43 18-59 (262)
95 3fwy_A Light-independent proto 87.4 0.78 2.7E-05 46.3 6.3 44 1-46 48-91 (314)
96 2afh_E Nitrogenase iron protei 86.8 0.82 2.8E-05 44.5 5.9 42 1-44 2-43 (289)
97 1cp2_A CP2, nitrogenase iron p 86.5 0.8 2.7E-05 43.8 5.6 42 1-44 1-42 (269)
98 3zq6_A Putative arsenical pump 86.0 0.62 2.1E-05 46.8 4.7 41 1-42 13-53 (324)
99 1wcv_1 SOJ, segregation protei 84.7 0.92 3.1E-05 43.5 5.0 43 1-44 6-48 (257)
100 1byi_A Dethiobiotin synthase; 84.3 1.2 4E-05 41.3 5.4 40 1-43 1-40 (224)
101 3ug7_A Arsenical pump-driving 82.9 1.2 4.2E-05 45.3 5.3 41 1-42 25-65 (349)
102 2obn_A Hypothetical protein; s 82.3 12 0.00039 38.6 12.3 151 1-220 152-310 (349)
103 3pg5_A Uncharacterized protein 82.2 1.3 4.6E-05 45.1 5.3 46 1-47 1-46 (361)
104 1nks_A Adenylate kinase; therm 81.5 1.1 3.7E-05 40.1 3.8 36 1-38 1-36 (194)
105 1z0s_A Probable inorganic poly 81.4 1.1 3.9E-05 44.7 4.3 72 297-400 29-100 (278)
106 1ls1_A Signal recognition part 81.4 9.4 0.00032 37.7 11.0 40 2-43 99-138 (295)
107 3bhn_A THIJ/PFPI domain protei 80.8 0.42 1.4E-05 46.4 0.9 45 360-406 78-127 (236)
108 2oze_A ORF delta'; para, walke 79.4 1.7 6E-05 42.2 4.8 42 3-44 36-78 (298)
109 3cio_A ETK, tyrosine-protein k 78.1 2.3 8E-05 42.2 5.4 154 1-218 104-275 (299)
110 3fkq_A NTRC-like two-domain pr 78.0 2 6.8E-05 43.9 4.9 44 1-45 143-186 (373)
111 3iqw_A Tail-anchored protein t 77.9 2.1 7E-05 43.6 4.9 40 2-43 17-56 (334)
112 3io3_A DEHA2D07832P; chaperone 77.7 2.1 7.1E-05 43.8 4.9 40 1-42 18-59 (348)
113 1ihu_A Arsenical pump-driving 77.5 2.3 7.7E-05 46.1 5.4 40 1-42 8-47 (589)
114 3bfv_A CAPA1, CAPB2, membrane 77.2 2.9 0.0001 40.8 5.7 41 1-42 82-122 (271)
115 2woo_A ATPase GET3; tail-ancho 76.8 2 6.8E-05 43.3 4.4 41 2-43 19-59 (329)
116 2woj_A ATPase GET3; tail-ancho 76.3 1.7 5.8E-05 44.4 3.8 42 2-44 18-61 (354)
117 3ff4_A Uncharacterized protein 75.5 12 0.00042 32.4 8.7 39 361-405 81-119 (122)
118 4b4o_A Epimerase family protei 75.4 2.8 9.7E-05 40.5 5.0 34 1-41 1-34 (298)
119 3cwq_A Para family chromosome 74.9 3 0.0001 38.8 4.8 40 2-43 1-40 (209)
120 2z0h_A DTMP kinase, thymidylat 74.5 3.7 0.00013 36.8 5.3 33 2-36 1-33 (197)
121 2f1r_A Molybdopterin-guanine d 71.8 2.8 9.7E-05 38.3 3.8 40 1-42 2-41 (171)
122 3guy_A Short-chain dehydrogena 71.7 2 6.9E-05 40.1 2.8 34 1-40 1-34 (230)
123 1gtv_A TMK, thymidylate kinase 70.9 1.7 5.8E-05 39.7 2.0 36 2-39 1-36 (214)
124 1zu4_A FTSY; GTPase, signal re 69.4 6.3 0.00021 39.7 6.1 39 2-42 106-144 (320)
125 2v3c_C SRP54, signal recogniti 68.4 2.8 9.7E-05 44.1 3.4 40 2-43 100-139 (432)
126 3pfn_A NAD kinase; structural 67.8 7.6 0.00026 40.2 6.4 94 298-400 39-141 (365)
127 3la6_A Tyrosine-protein kinase 66.7 5.7 0.00019 39.2 5.0 40 2-42 93-132 (286)
128 2oyn_A Hypothetical protein MJ 65.9 2.3 7.7E-05 38.7 1.7 41 2-42 5-53 (146)
129 1vma_A Cell division protein F 65.3 8.8 0.0003 38.4 6.1 40 2-43 105-144 (306)
130 2pbr_A DTMP kinase, thymidylat 64.3 6.2 0.00021 35.0 4.4 33 2-36 1-33 (195)
131 1fjh_A 3alpha-hydroxysteroid d 64.2 5 0.00017 37.7 3.9 34 1-40 1-34 (257)
132 1zmt_A Haloalcohol dehalogenas 63.6 5 0.00017 38.1 3.8 31 1-37 1-31 (254)
133 2px0_A Flagellar biosynthesis 63.0 7.4 0.00025 38.6 5.1 39 2-42 106-145 (296)
134 1u0t_A Inorganic polyphosphate 61.3 9.7 0.00033 37.9 5.6 94 298-400 5-108 (307)
135 1j8m_F SRP54, signal recogniti 59.8 11 0.00038 37.4 5.6 40 2-43 99-138 (297)
136 4fyk_A Deoxyribonucleoside 5'- 59.8 23 0.0008 32.1 7.3 94 298-399 3-102 (152)
137 3ez2_A Plasmid partition prote 59.3 11 0.00039 38.3 5.8 43 1-44 108-156 (398)
138 1eiw_A Hypothetical protein MT 58.1 8 0.00027 33.3 3.7 39 359-397 35-73 (111)
139 1rz3_A Hypothetical protein rb 57.9 13 0.00043 34.0 5.4 40 2-43 23-62 (201)
140 1nn5_A Similar to deoxythymidy 57.3 11 0.00038 34.0 4.9 34 2-37 10-43 (215)
141 2an1_A Putative kinase; struct 56.7 16 0.00055 35.7 6.2 89 298-400 6-96 (292)
142 2j37_W Signal recognition part 56.5 14 0.00047 39.8 6.0 40 2-43 102-141 (504)
143 3a4m_A L-seryl-tRNA(SEC) kinas 55.7 11 0.00036 36.3 4.6 39 1-41 4-42 (260)
144 3ez9_A Para; DNA binding, wing 55.0 9.6 0.00033 39.0 4.4 45 1-46 111-161 (403)
145 3l77_A Short-chain alcohol deh 54.6 8.4 0.00029 35.7 3.6 33 1-39 2-34 (235)
146 3igf_A ALL4481 protein; two-do 53.6 11 0.00039 38.8 4.7 39 1-42 2-40 (374)
147 4edh_A DTMP kinase, thymidylat 53.5 15 0.00052 34.5 5.2 35 2-38 7-41 (213)
148 4e4y_A Short chain dehydrogena 52.8 7.2 0.00025 36.6 2.8 35 1-40 4-38 (244)
149 3h2s_A Putative NADH-flavin re 52.4 14 0.00048 33.5 4.7 34 1-41 1-34 (224)
150 3l6e_A Oxidoreductase, short-c 52.3 9.5 0.00032 35.8 3.6 33 1-39 3-35 (235)
151 1p3d_A UDP-N-acetylmuramate--a 52.0 14 0.00049 38.7 5.3 57 2-64 119-175 (475)
152 2x5o_A UDP-N-acetylmuramoylala 52.0 17 0.00058 37.8 5.8 55 2-70 105-164 (439)
153 2ph3_A 3-oxoacyl-[acyl carrier 51.9 7.9 0.00027 35.9 2.9 31 1-37 1-31 (245)
154 1w78_A FOLC bifunctional prote 51.5 15 0.00052 37.9 5.2 32 2-37 50-81 (422)
155 3llv_A Exopolyphosphatase-rela 51.4 11 0.00037 32.1 3.5 33 2-41 7-39 (141)
156 3ew7_A LMO0794 protein; Q8Y8U8 51.4 17 0.00057 32.8 5.0 34 1-41 1-34 (221)
157 1kht_A Adenylate kinase; phosp 51.2 14 0.00047 32.6 4.3 34 2-37 4-37 (192)
158 1zmo_A Halohydrin dehalogenase 50.9 11 0.00038 35.4 3.8 31 1-37 1-31 (244)
159 1jbw_A Folylpolyglutamate synt 49.9 15 0.00051 38.0 4.9 32 2-37 40-71 (428)
160 3ksm_A ABC-type sugar transpor 49.5 57 0.002 30.0 8.5 33 361-397 57-90 (276)
161 2f00_A UDP-N-acetylmuramate--L 49.4 17 0.00057 38.5 5.3 57 2-64 120-176 (491)
162 2wwf_A Thymidilate kinase, put 49.0 18 0.00063 32.6 4.9 34 2-37 11-44 (212)
163 3orf_A Dihydropteridine reduct 48.9 13 0.00043 35.2 3.9 34 2-41 23-56 (251)
164 2yvu_A Probable adenylyl-sulfa 48.8 17 0.00059 32.4 4.6 39 2-42 14-52 (186)
165 2jah_A Clavulanic acid dehydro 48.3 11 0.00039 35.4 3.4 32 2-39 8-39 (247)
166 3i4f_A 3-oxoacyl-[acyl-carrier 47.5 11 0.00038 35.5 3.2 31 1-37 7-37 (264)
167 3i1j_A Oxidoreductase, short c 47.4 11 0.00039 35.0 3.2 32 2-39 15-46 (247)
168 3nrs_A Dihydrofolate:folylpoly 47.2 16 0.00054 38.2 4.6 32 2-37 53-84 (437)
169 1j6u_A UDP-N-acetylmuramate-al 47.2 24 0.00082 37.1 6.0 38 2-44 115-152 (469)
170 3e03_A Short chain dehydrogena 46.9 13 0.00046 35.6 3.7 31 2-38 7-37 (274)
171 3ged_A Short-chain dehydrogena 46.7 12 0.00042 36.2 3.4 33 2-40 3-35 (247)
172 3kb2_A SPBC2 prophage-derived 46.4 14 0.00049 31.9 3.6 25 1-27 1-25 (173)
173 3o26_A Salutaridine reductase; 46.2 12 0.00041 35.8 3.2 32 2-39 13-44 (311)
174 1o5z_A Folylpolyglutamate synt 45.9 18 0.00061 37.8 4.8 32 2-37 53-84 (442)
175 3h7a_A Short chain dehydrogena 45.9 14 0.00049 35.0 3.7 32 2-39 8-39 (252)
176 3gbv_A Putative LACI-family tr 45.8 84 0.0029 29.3 9.2 34 361-398 68-101 (304)
177 3vtz_A Glucose 1-dehydrogenase 45.6 14 0.00047 35.5 3.6 33 2-40 15-47 (269)
178 3zv4_A CIS-2,3-dihydrobiphenyl 45.1 13 0.00046 35.8 3.4 30 2-37 6-35 (281)
179 3kts_A Glycerol uptake operon 44.8 23 0.00078 33.4 4.8 78 112-216 11-88 (192)
180 3lf2_A Short chain oxidoreduct 44.7 14 0.00047 35.2 3.4 32 2-39 9-40 (265)
181 3asu_A Short-chain dehydrogena 44.7 17 0.00058 34.4 4.0 31 2-38 1-31 (248)
182 3rwb_A TPLDH, pyridoxal 4-dehy 44.7 13 0.00044 35.1 3.1 30 2-37 7-36 (247)
183 3t4x_A Oxidoreductase, short c 44.7 13 0.00043 35.5 3.1 32 2-39 11-42 (267)
184 3tpc_A Short chain alcohol deh 44.4 16 0.00054 34.5 3.7 32 2-39 8-39 (257)
185 3p19_A BFPVVD8, putative blue 44.4 13 0.00046 35.6 3.3 31 2-38 17-47 (266)
186 2ekp_A 2-deoxy-D-gluconate 3-d 44.3 16 0.00054 34.1 3.7 33 2-40 3-35 (239)
187 3gvc_A Oxidoreductase, probabl 44.3 15 0.00052 35.4 3.7 31 2-38 30-60 (277)
188 2hq1_A Glucose/ribitol dehydro 44.0 14 0.00047 34.3 3.2 30 2-37 6-35 (247)
189 2pjk_A 178AA long hypothetical 43.9 28 0.00096 32.0 5.3 47 111-166 59-106 (178)
190 3nyw_A Putative oxidoreductase 43.8 13 0.00043 35.3 3.0 32 2-39 8-39 (250)
191 1g5t_A COB(I)alamin adenosyltr 43.8 13 0.00044 35.1 3.0 29 13-41 36-66 (196)
192 2d1y_A Hypothetical protein TT 43.6 16 0.00056 34.5 3.7 33 2-40 7-39 (256)
193 4a0g_A Adenosylmethionine-8-am 43.5 19 0.00064 41.1 4.8 36 2-38 35-75 (831)
194 4b79_A PA4098, probable short- 43.5 16 0.00056 35.3 3.7 33 2-40 12-44 (242)
195 2dtx_A Glucose 1-dehydrogenase 43.4 17 0.00057 34.8 3.8 34 2-41 9-42 (264)
196 4imr_A 3-oxoacyl-(acyl-carrier 43.4 15 0.00051 35.4 3.5 31 2-38 34-64 (275)
197 3lyl_A 3-oxoacyl-(acyl-carrier 43.3 14 0.00049 34.4 3.2 31 2-38 6-36 (247)
198 3pxx_A Carveol dehydrogenase; 43.2 15 0.0005 35.1 3.4 33 2-40 11-43 (287)
199 4hf7_A Putative acylhydrolase; 43.1 31 0.0011 31.3 5.5 61 118-186 63-130 (209)
200 2fwm_X 2,3-dihydro-2,3-dihydro 43.0 17 0.00058 34.2 3.7 33 2-40 8-40 (250)
201 3uce_A Dehydrogenase; rossmann 42.9 11 0.00038 34.8 2.3 33 2-40 7-39 (223)
202 3ezl_A Acetoacetyl-COA reducta 42.8 14 0.00049 34.6 3.1 29 2-36 14-42 (256)
203 4dmm_A 3-oxoacyl-[acyl-carrier 42.7 14 0.00047 35.5 3.1 30 2-37 29-58 (269)
204 2cfc_A 2-(R)-hydroxypropyl-COM 42.3 17 0.00058 33.7 3.5 31 2-38 3-33 (250)
205 4eso_A Putative oxidoreductase 42.0 16 0.00055 34.7 3.4 32 2-39 9-40 (255)
206 1vl8_A Gluconate 5-dehydrogena 41.9 16 0.00055 34.9 3.4 32 2-39 22-53 (267)
207 1ooe_A Dihydropteridine reduct 41.9 19 0.00064 33.5 3.8 34 2-41 4-37 (236)
208 1wma_A Carbonyl reductase [NAD 41.9 18 0.0006 33.8 3.6 34 1-40 4-38 (276)
209 2dkn_A 3-alpha-hydroxysteroid 41.7 26 0.00089 32.2 4.7 34 1-40 1-34 (255)
210 1vi6_A 30S ribosomal protein S 41.7 1.1E+02 0.0039 29.0 9.2 77 298-398 69-145 (208)
211 3tfo_A Putative 3-oxoacyl-(acy 41.5 16 0.00053 35.2 3.2 33 2-40 5-37 (264)
212 4e3z_A Putative oxidoreductase 41.4 15 0.00053 34.9 3.2 29 2-36 27-55 (272)
213 2ew8_A (S)-1-phenylethanol deh 41.4 19 0.00063 33.9 3.7 32 2-39 8-39 (249)
214 3ai3_A NADPH-sorbose reductase 41.4 17 0.00057 34.4 3.4 31 2-38 8-38 (263)
215 3bos_A Putative DNA replicatio 41.4 43 0.0015 30.2 6.1 59 3-63 54-112 (242)
216 3m1a_A Putative dehydrogenase; 41.4 17 0.00059 34.6 3.6 32 1-38 5-36 (281)
217 3a28_C L-2.3-butanediol dehydr 41.3 16 0.00054 34.5 3.2 32 2-39 3-34 (258)
218 3lv8_A DTMP kinase, thymidylat 41.3 27 0.00091 33.5 4.8 35 2-38 28-63 (236)
219 3rkr_A Short chain oxidoreduct 41.1 16 0.00055 34.6 3.2 31 2-38 30-60 (262)
220 3op4_A 3-oxoacyl-[acyl-carrier 41.0 16 0.00056 34.4 3.2 31 2-38 10-40 (248)
221 3oid_A Enoyl-[acyl-carrier-pro 41.0 16 0.00055 34.7 3.2 29 2-36 5-33 (258)
222 2p67_A LAO/AO transport system 41.0 1.1E+02 0.0039 30.3 9.7 40 2-43 57-96 (341)
223 4iiu_A 3-oxoacyl-[acyl-carrier 41.0 16 0.00055 34.7 3.2 29 2-36 27-55 (267)
224 3ppi_A 3-hydroxyacyl-COA dehyd 40.9 19 0.00065 34.4 3.7 32 2-39 31-62 (281)
225 3tsc_A Putative oxidoreductase 40.7 17 0.00058 34.8 3.4 32 2-39 12-43 (277)
226 3tl3_A Short-chain type dehydr 40.7 15 0.00051 34.7 2.9 30 2-37 10-39 (257)
227 2uvd_A 3-oxoacyl-(acyl-carrier 40.7 16 0.00054 34.2 3.1 30 2-37 5-34 (246)
228 3ioy_A Short-chain dehydrogena 40.6 20 0.00069 35.4 4.0 32 2-39 9-40 (319)
229 3f1l_A Uncharacterized oxidore 40.6 18 0.0006 34.2 3.4 31 2-38 13-43 (252)
230 2rhc_B Actinorhodin polyketide 40.6 17 0.00059 34.8 3.4 32 2-39 23-54 (277)
231 3tzq_B Short-chain type dehydr 40.4 19 0.00067 34.3 3.7 32 2-39 12-43 (271)
232 2a6a_A Hypothetical protein TM 40.3 21 0.0007 34.1 3.8 44 361-405 65-110 (218)
233 3qiv_A Short-chain dehydrogena 40.3 18 0.00061 33.8 3.4 31 2-38 10-40 (253)
234 4dry_A 3-oxoacyl-[acyl-carrier 40.3 16 0.00055 35.3 3.1 31 2-38 34-64 (281)
235 3sho_A Transcriptional regulat 40.2 1.9E+02 0.0066 25.4 11.1 96 282-399 27-122 (187)
236 3pk0_A Short-chain dehydrogena 40.1 16 0.00056 34.7 3.1 32 2-39 11-42 (262)
237 2ae2_A Protein (tropinone redu 40.1 18 0.00062 34.1 3.4 32 2-39 10-41 (260)
238 1iy8_A Levodione reductase; ox 40.1 18 0.00061 34.3 3.4 31 2-38 14-44 (267)
239 1mxh_A Pteridine reductase 2; 40.0 16 0.00055 34.7 3.1 30 2-37 12-41 (276)
240 2vos_A Folylpolyglutamate synt 40.0 26 0.00088 37.2 4.9 31 2-36 65-95 (487)
241 3hp4_A GDSL-esterase; psychrot 40.0 44 0.0015 29.0 5.8 74 91-174 21-103 (185)
242 4f67_A UPF0176 protein LPG2838 39.8 18 0.00061 35.6 3.4 62 2-71 183-247 (265)
243 3s55_A Putative short-chain de 39.8 18 0.00061 34.6 3.4 33 2-40 11-43 (281)
244 2o23_A HADH2 protein; HSD17B10 39.8 20 0.0007 33.5 3.7 32 2-39 13-44 (265)
245 2wsb_A Galactitol dehydrogenas 39.7 19 0.00063 33.5 3.4 31 2-38 12-42 (254)
246 2nwq_A Probable short-chain de 39.7 23 0.00079 34.1 4.1 33 2-40 22-54 (272)
247 4dqx_A Probable oxidoreductase 39.6 18 0.00062 34.9 3.4 31 2-38 28-58 (277)
248 3l49_A ABC sugar (ribose) tran 39.5 98 0.0033 28.8 8.5 33 361-397 60-92 (291)
249 1e7w_A Pteridine reductase; di 39.5 17 0.00057 35.3 3.1 31 2-38 10-40 (291)
250 3ek2_A Enoyl-(acyl-carrier-pro 39.5 22 0.00075 33.4 3.9 31 2-37 15-46 (271)
251 3uve_A Carveol dehydrogenase ( 39.4 18 0.00062 34.7 3.4 33 2-40 12-44 (286)
252 1h5q_A NADP-dependent mannitol 39.4 19 0.00065 33.6 3.4 30 2-37 15-44 (265)
253 3t7c_A Carveol dehydrogenase; 39.4 18 0.00062 35.2 3.4 34 2-41 29-62 (299)
254 3icc_A Putative 3-oxoacyl-(acy 39.4 17 0.00059 33.8 3.1 30 2-37 8-37 (255)
255 3tjr_A Short chain dehydrogena 39.2 18 0.00063 35.2 3.4 30 2-37 32-61 (301)
256 3r1i_A Short-chain type dehydr 39.2 21 0.0007 34.5 3.7 30 2-37 33-62 (276)
257 3dqp_A Oxidoreductase YLBE; al 39.1 27 0.00092 31.7 4.3 34 1-41 1-34 (219)
258 3o38_A Short chain dehydrogena 39.0 23 0.00078 33.4 4.0 33 2-39 23-55 (266)
259 3rd5_A Mypaa.01249.C; ssgcid, 39.0 19 0.00066 34.7 3.5 33 2-40 17-49 (291)
260 3sx2_A Putative 3-ketoacyl-(ac 39.0 19 0.00065 34.3 3.4 32 2-39 14-45 (278)
261 1edo_A Beta-keto acyl carrier 39.0 18 0.0006 33.5 3.1 29 2-36 2-30 (244)
262 1spx_A Short-chain reductase f 38.9 17 0.00059 34.5 3.1 32 2-39 7-38 (278)
263 2qq5_A DHRS1, dehydrogenase/re 38.8 18 0.00062 34.1 3.2 31 2-38 6-36 (260)
264 3gem_A Short chain dehydrogena 38.7 16 0.00055 34.9 2.8 33 2-40 28-60 (260)
265 3v2g_A 3-oxoacyl-[acyl-carrier 38.6 19 0.00065 34.6 3.4 30 2-37 32-61 (271)
266 3un1_A Probable oxidoreductase 38.5 21 0.00071 34.0 3.6 33 2-40 29-61 (260)
267 4tmk_A Protein (thymidylate ki 38.5 32 0.0011 32.3 4.8 33 2-36 4-37 (213)
268 1o5i_A 3-oxoacyl-(acyl carrier 38.5 20 0.00068 33.8 3.4 34 2-41 20-53 (249)
269 3ftp_A 3-oxoacyl-[acyl-carrier 38.4 18 0.00062 34.7 3.1 30 2-37 29-58 (270)
270 3ak4_A NADH-dependent quinucli 38.1 20 0.00068 33.8 3.4 31 2-38 13-43 (263)
271 1geg_A Acetoin reductase; SDR 38.1 20 0.00069 33.7 3.4 31 2-38 3-33 (256)
272 2q2v_A Beta-D-hydroxybutyrate 37.8 20 0.00069 33.7 3.3 30 2-37 5-34 (255)
273 3ijr_A Oxidoreductase, short c 37.8 22 0.00076 34.4 3.7 32 2-39 48-79 (291)
274 1uuy_A CNX1, molybdopterin bio 37.6 57 0.002 29.3 6.2 47 111-166 49-96 (167)
275 1yde_A Retinal dehydrogenase/r 37.5 21 0.00071 34.2 3.4 32 2-39 10-41 (270)
276 2z1n_A Dehydrogenase; reductas 37.5 21 0.00071 33.7 3.4 31 2-38 8-38 (260)
277 2x9g_A PTR1, pteridine reducta 37.3 19 0.00063 34.7 3.0 32 2-39 24-55 (288)
278 4e6p_A Probable sorbitol dehyd 37.2 21 0.00073 33.7 3.4 32 2-39 9-40 (259)
279 3v8b_A Putative dehydrogenase, 37.1 21 0.00073 34.5 3.4 31 2-38 29-59 (283)
280 3uf0_A Short-chain dehydrogena 37.1 21 0.00071 34.4 3.4 30 2-37 32-61 (273)
281 8abp_A L-arabinose-binding pro 37.0 1.4E+02 0.0048 27.9 9.3 33 361-397 56-88 (306)
282 3svt_A Short-chain type dehydr 36.9 21 0.00073 34.1 3.4 33 2-40 12-44 (281)
283 3ksu_A 3-oxoacyl-acyl carrier 36.9 17 0.00059 34.6 2.7 30 2-37 12-41 (262)
284 3pzy_A MOG; ssgcid, seattle st 36.8 31 0.0011 31.2 4.3 45 111-166 46-91 (164)
285 2ptg_A Enoyl-acyl carrier redu 36.7 26 0.00088 34.3 4.0 33 2-39 10-43 (319)
286 3sc4_A Short chain dehydrogena 36.7 22 0.00074 34.3 3.4 33 2-40 10-42 (285)
287 1xx6_A Thymidine kinase; NESG, 36.7 35 0.0012 31.6 4.7 33 2-38 9-43 (191)
288 1xu9_A Corticosteroid 11-beta- 36.7 21 0.0007 34.3 3.2 32 2-39 29-60 (286)
289 2plr_A DTMP kinase, probable t 36.7 36 0.0012 30.3 4.8 30 2-34 5-34 (213)
290 1vjn_A Zn-dependent hydrolase 36.6 37 0.0013 31.7 5.0 71 139-219 138-208 (220)
291 1uls_A Putative 3-oxoacyl-acyl 36.6 22 0.00075 33.3 3.4 32 2-39 6-37 (245)
292 4gkb_A 3-oxoacyl-[acyl-carrier 36.4 24 0.00084 34.2 3.7 30 2-37 8-37 (258)
293 3osu_A 3-oxoacyl-[acyl-carrier 36.3 21 0.00072 33.4 3.2 29 2-36 5-33 (246)
294 3rih_A Short chain dehydrogena 36.3 22 0.00075 34.7 3.4 33 2-40 42-74 (293)
295 3bch_A 40S ribosomal protein S 36.2 1.1E+02 0.0039 29.9 8.4 77 298-398 105-181 (253)
296 3sju_A Keto reductase; short-c 36.2 22 0.00077 34.1 3.4 31 2-38 25-55 (279)
297 3v2h_A D-beta-hydroxybutyrate 36.2 23 0.00078 34.2 3.5 29 2-36 26-54 (281)
298 3is3_A 17BETA-hydroxysteroid d 36.1 21 0.00071 34.0 3.2 29 2-36 19-47 (270)
299 4fn4_A Short chain dehydrogena 36.1 22 0.00076 34.5 3.4 32 2-39 8-39 (254)
300 1yo6_A Putative carbonyl reduc 36.1 22 0.00075 32.6 3.2 33 2-40 4-38 (250)
301 3edm_A Short chain dehydrogena 36.0 22 0.00077 33.7 3.4 30 2-37 9-38 (259)
302 4iin_A 3-ketoacyl-acyl carrier 35.9 21 0.00071 34.0 3.1 30 2-37 30-59 (271)
303 4hp8_A 2-deoxy-D-gluconate 3-d 35.8 23 0.00079 34.4 3.5 30 2-37 10-39 (247)
304 1uay_A Type II 3-hydroxyacyl-C 35.8 24 0.00083 32.3 3.5 34 2-41 3-36 (242)
305 1yb1_A 17-beta-hydroxysteroid 35.5 23 0.00079 33.7 3.4 32 2-39 32-63 (272)
306 4h15_A Short chain alcohol deh 35.5 21 0.00073 34.5 3.2 31 2-38 12-42 (261)
307 2h7i_A Enoyl-[acyl-carrier-pro 35.4 31 0.0011 32.7 4.3 32 2-38 8-40 (269)
308 3g1w_A Sugar ABC transporter; 35.4 1.2E+02 0.0042 28.4 8.6 33 361-397 60-92 (305)
309 1ae1_A Tropinone reductase-I; 35.4 24 0.00081 33.7 3.4 32 2-39 22-53 (273)
310 2zat_A Dehydrogenase/reductase 35.4 23 0.00077 33.4 3.2 31 2-38 15-45 (260)
311 1x1t_A D(-)-3-hydroxybutyrate 35.3 23 0.00078 33.4 3.3 30 2-37 5-34 (260)
312 2r8r_A Sensor protein; KDPD, P 35.2 31 0.0011 33.3 4.2 32 11-42 14-45 (228)
313 4g81_D Putative hexonate dehyd 35.2 18 0.00062 35.2 2.6 30 2-37 10-39 (255)
314 3uxy_A Short-chain dehydrogena 35.1 21 0.00071 34.2 2.9 30 2-37 29-58 (266)
315 3p32_A Probable GTPase RV1496/ 34.9 45 0.0015 33.5 5.6 41 2-44 80-120 (355)
316 1hdc_A 3-alpha, 20 beta-hydrox 34.9 23 0.0008 33.4 3.3 31 2-38 6-36 (254)
317 3ucx_A Short chain dehydrogena 34.9 29 0.001 32.9 4.0 31 2-38 12-42 (264)
318 4fc7_A Peroxisomal 2,4-dienoyl 34.9 22 0.00074 34.1 3.1 30 2-37 28-57 (277)
319 1e6c_A Shikimate kinase; phosp 34.8 24 0.00081 30.7 3.1 25 1-27 2-26 (173)
320 3ko8_A NAD-dependent epimerase 34.8 38 0.0013 32.3 4.8 31 4-40 3-33 (312)
321 1zem_A Xylitol dehydrogenase; 34.8 24 0.00084 33.3 3.4 32 2-39 8-39 (262)
322 3dii_A Short-chain dehydrogena 34.8 25 0.00086 33.0 3.5 32 2-39 3-34 (247)
323 1gz6_A Estradiol 17 beta-dehyd 34.7 20 0.00069 35.5 2.9 30 2-37 10-39 (319)
324 1sby_A Alcohol dehydrogenase; 34.7 26 0.00091 32.7 3.6 31 2-38 6-37 (254)
325 2nm0_A Probable 3-oxacyl-(acyl 34.7 29 0.00099 32.9 3.9 33 2-40 22-54 (253)
326 2c07_A 3-oxoacyl-(acyl-carrier 34.6 20 0.00068 34.4 2.8 31 2-38 45-75 (285)
327 1xhl_A Short-chain dehydrogena 34.6 22 0.00076 34.6 3.1 32 2-39 27-58 (297)
328 3v9p_A DTMP kinase, thymidylat 34.5 33 0.0011 32.7 4.2 35 2-38 26-64 (227)
329 3gk3_A Acetoacetyl-COA reducta 34.4 22 0.00074 33.8 3.0 29 2-36 26-54 (269)
330 3qlj_A Short chain dehydrogena 34.3 22 0.00075 35.0 3.1 31 2-38 28-58 (322)
331 3dhn_A NAD-dependent epimerase 34.3 40 0.0014 30.5 4.7 35 1-41 4-38 (227)
332 4ibo_A Gluconate dehydrogenase 34.0 19 0.00067 34.5 2.6 30 2-37 27-56 (271)
333 1e8c_A UDP-N-acetylmuramoylala 34.0 43 0.0015 35.3 5.5 33 2-38 109-141 (498)
334 3cxt_A Dehydrogenase with diff 33.9 25 0.00086 34.1 3.4 31 2-38 35-65 (291)
335 3r3s_A Oxidoreductase; structu 33.7 25 0.00086 34.1 3.4 30 2-37 50-79 (294)
336 2o2s_A Enoyl-acyl carrier redu 33.7 28 0.00097 34.0 3.8 33 2-39 10-43 (315)
337 1ja9_A 4HNR, 1,3,6,8-tetrahydr 33.6 24 0.00082 33.1 3.1 30 2-37 22-51 (274)
338 1zk4_A R-specific alcohol dehy 33.5 24 0.00084 32.6 3.1 32 2-39 7-38 (251)
339 1gee_A Glucose 1-dehydrogenase 33.4 25 0.00085 32.9 3.2 30 2-37 8-37 (261)
340 1xq1_A Putative tropinone redu 33.4 24 0.00083 33.1 3.1 33 2-40 15-47 (266)
341 2b4q_A Rhamnolipids biosynthes 33.4 24 0.00083 33.9 3.1 30 2-37 30-59 (276)
342 3n74_A 3-ketoacyl-(acyl-carrie 33.3 27 0.00093 32.7 3.5 32 2-39 10-41 (261)
343 3u5t_A 3-oxoacyl-[acyl-carrier 33.3 23 0.00078 33.9 2.9 29 2-36 28-56 (267)
344 1yxm_A Pecra, peroxisomal tran 33.2 26 0.0009 33.6 3.4 31 2-38 19-49 (303)
345 1orr_A CDP-tyvelose-2-epimeras 33.1 35 0.0012 33.0 4.3 31 1-37 1-31 (347)
346 2pez_A Bifunctional 3'-phospho 33.1 56 0.0019 28.7 5.4 33 2-36 6-38 (179)
347 3oec_A Carveol dehydrogenase ( 33.1 25 0.00084 34.6 3.2 31 2-38 47-77 (317)
348 1hxh_A 3BETA/17BETA-hydroxyste 33.0 23 0.00078 33.3 2.8 30 2-37 7-36 (253)
349 3rht_A (gatase1)-like protein; 33.0 1.5E+02 0.0053 28.8 8.9 82 297-397 4-85 (259)
350 3l6u_A ABC-type sugar transpor 33.0 1.3E+02 0.0046 27.8 8.3 33 361-397 63-95 (293)
351 3ctm_A Carbonyl reductase; alc 32.9 29 0.00099 32.9 3.6 31 2-38 35-65 (279)
352 1sny_A Sniffer CG10964-PA; alp 32.9 26 0.0009 32.8 3.3 34 1-40 21-57 (267)
353 3imf_A Short chain dehydrogena 32.9 26 0.00087 33.1 3.2 31 2-38 7-37 (257)
354 3ld9_A DTMP kinase, thymidylat 32.8 46 0.0016 31.7 4.9 33 2-36 22-55 (223)
355 1fmc_A 7 alpha-hydroxysteroid 32.7 23 0.00079 32.8 2.8 31 2-38 12-42 (255)
356 3rot_A ABC sugar transporter, 32.6 1.2E+02 0.0042 28.4 8.1 33 361-397 60-92 (297)
357 4egf_A L-xylulose reductase; s 32.6 25 0.00086 33.4 3.1 32 2-39 21-52 (266)
358 2bgk_A Rhizome secoisolaricire 32.6 28 0.00096 32.8 3.4 31 2-38 17-47 (278)
359 3grp_A 3-oxoacyl-(acyl carrier 32.6 26 0.00089 33.5 3.2 31 2-38 28-58 (266)
360 3nrc_A Enoyl-[acyl-carrier-pro 32.6 36 0.0012 32.5 4.3 34 2-40 27-61 (280)
361 2a4k_A 3-oxoacyl-[acyl carrier 32.5 28 0.00096 33.2 3.4 31 2-38 7-37 (263)
362 1g0o_A Trihydroxynaphthalene r 32.5 28 0.00096 33.3 3.4 30 2-37 30-59 (283)
363 2qhx_A Pteridine reductase 1; 32.5 25 0.00085 34.9 3.1 31 2-38 47-77 (328)
364 2pd4_A Enoyl-[acyl-carrier-pro 32.2 35 0.0012 32.4 4.1 32 2-38 7-39 (275)
365 3m9w_A D-xylose-binding peripl 32.2 1.4E+02 0.0047 28.3 8.4 33 361-397 57-89 (313)
366 3u9l_A 3-oxoacyl-[acyl-carrier 32.1 29 0.00099 34.4 3.6 30 2-37 6-35 (324)
367 4fgs_A Probable dehydrogenase 31.7 29 0.00099 34.1 3.4 31 2-38 30-60 (273)
368 3lkv_A Uncharacterized conserv 31.5 93 0.0032 30.0 7.1 66 296-370 7-77 (302)
369 2v54_A DTMP kinase, thymidylat 31.5 27 0.00093 31.2 3.0 31 2-36 5-35 (204)
370 3r6m_A YEAZ, resuscitation pro 31.4 32 0.0011 32.7 3.6 61 361-422 55-122 (213)
371 3uug_A Multiple sugar-binding 31.4 1.6E+02 0.0056 27.8 8.8 33 361-397 58-90 (330)
372 2p91_A Enoyl-[acyl-carrier-pro 31.3 39 0.0013 32.3 4.3 32 2-38 22-54 (285)
373 4da9_A Short-chain dehydrogena 31.3 29 0.001 33.4 3.4 30 2-37 30-59 (280)
374 1jlj_A Gephyrin; globular alph 31.1 64 0.0022 29.8 5.5 66 89-166 34-103 (189)
375 1qsg_A Enoyl-[acyl-carrier-pro 31.1 41 0.0014 31.8 4.3 32 2-38 10-42 (265)
376 1uj2_A Uridine-cytidine kinase 31.1 43 0.0015 31.5 4.5 25 2-28 23-47 (252)
377 4ag6_A VIRB4 ATPase, type IV s 31.0 48 0.0016 33.5 5.0 50 3-56 37-102 (392)
378 1xkq_A Short-chain reductase f 31.0 28 0.00095 33.3 3.1 32 2-39 7-38 (280)
379 3d02_A Putative LACI-type tran 30.5 2.1E+02 0.0073 26.5 9.3 34 361-398 60-93 (303)
380 3pgx_A Carveol dehydrogenase; 30.3 32 0.0011 32.8 3.4 32 2-39 16-47 (280)
381 3tox_A Short chain dehydrogena 30.3 26 0.00088 33.9 2.8 31 2-38 9-39 (280)
382 2gk3_A Putative cytoplasmic pr 30.1 38 0.0013 32.7 3.9 67 313-397 42-124 (256)
383 1d7o_A Enoyl-[acyl-carrier pro 30.1 40 0.0014 32.4 4.1 35 2-41 9-44 (297)
384 1w6u_A 2,4-dienoyl-COA reducta 30.0 32 0.0011 32.9 3.4 30 2-37 27-56 (302)
385 1oaa_A Sepiapterin reductase; 30.0 31 0.0011 32.4 3.3 31 2-38 7-40 (259)
386 3qvo_A NMRA family protein; st 29.9 45 0.0015 30.8 4.3 35 1-41 23-58 (236)
387 4eaq_A DTMP kinase, thymidylat 29.6 47 0.0016 31.2 4.4 31 2-35 27-57 (229)
388 1odf_A YGR205W, hypothetical 3 29.6 41 0.0014 33.1 4.2 41 2-44 32-75 (290)
389 1m7g_A Adenylylsulfate kinase; 29.6 41 0.0014 30.6 3.9 35 2-38 26-61 (211)
390 2wyu_A Enoyl-[acyl carrier pro 29.6 40 0.0014 31.7 4.0 32 2-38 9-41 (261)
391 2p5y_A UDP-glucose 4-epimerase 29.5 45 0.0015 31.9 4.3 30 1-37 1-30 (311)
392 1uf9_A TT1252 protein; P-loop, 29.4 41 0.0014 29.8 3.8 25 2-32 9-33 (203)
393 2c20_A UDP-glucose 4-epimerase 29.2 51 0.0017 31.7 4.7 32 1-38 1-32 (330)
394 3jy6_A Transcriptional regulat 29.2 2E+02 0.0069 26.5 8.9 31 361-398 62-92 (276)
395 3oig_A Enoyl-[acyl-carrier-pro 29.1 43 0.0015 31.5 4.1 31 2-37 8-39 (266)
396 3tb6_A Arabinose metabolism tr 29.1 1.9E+02 0.0064 26.7 8.6 37 361-398 70-106 (298)
397 3rft_A Uronate dehydrogenase; 28.9 31 0.0011 32.6 3.1 35 1-41 3-37 (267)
398 2wtz_A UDP-N-acetylmuramoyl-L- 28.7 55 0.0019 34.9 5.3 33 2-38 147-179 (535)
399 3u5c_A 40S ribosomal protein S 28.7 2E+02 0.0068 28.2 8.7 76 299-398 72-147 (252)
400 1jtv_A 17 beta-hydroxysteroid 28.6 29 0.00098 34.4 2.8 30 2-37 3-32 (327)
401 3kvo_A Hydroxysteroid dehydrog 28.4 34 0.0012 34.3 3.4 32 2-39 46-77 (346)
402 3gv0_A Transcriptional regulat 28.3 1.4E+02 0.0049 27.8 7.7 31 361-397 65-95 (288)
403 3eag_A UDP-N-acetylmuramate:L- 28.0 2.5E+02 0.0084 27.6 9.6 30 297-330 4-34 (326)
404 3cs3_A Sugar-binding transcrip 28.0 1.2E+02 0.0043 28.0 7.1 30 362-397 57-86 (277)
405 1a7j_A Phosphoribulokinase; tr 28.0 36 0.0012 33.4 3.4 41 2-44 6-46 (290)
406 3r6d_A NAD-dependent epimerase 27.7 57 0.0019 29.5 4.5 34 1-40 5-39 (221)
407 2rh8_A Anthocyanidin reductase 27.5 60 0.002 31.3 4.9 34 2-41 10-43 (338)
408 1y63_A LMAJ004144AAA protein; 27.4 38 0.0013 30.2 3.2 22 2-25 11-32 (184)
409 3k4h_A Putative transcriptiona 27.2 1.8E+02 0.006 27.0 8.0 31 361-397 68-98 (292)
410 3gdg_A Probable NADP-dependent 27.2 40 0.0014 31.6 3.5 31 2-37 21-52 (267)
411 3d7l_A LIN1944 protein; APC893 27.2 61 0.0021 28.8 4.6 33 1-41 4-36 (202)
412 3e48_A Putative nucleoside-dip 27.2 53 0.0018 31.0 4.3 34 1-41 1-35 (289)
413 1yrb_A ATP(GTP)binding protein 27.1 77 0.0027 29.4 5.5 38 4-44 17-54 (262)
414 2c29_D Dihydroflavonol 4-reduc 26.7 55 0.0019 31.7 4.4 34 2-41 6-39 (337)
415 2rgy_A Transcriptional regulat 26.7 2E+02 0.007 26.7 8.5 32 361-398 66-97 (290)
416 2grj_A Dephospho-COA kinase; T 26.6 48 0.0016 30.5 3.8 26 3-34 14-40 (192)
417 4eyg_A Twin-arginine transloca 26.4 3.4E+02 0.012 25.8 10.2 92 295-399 4-104 (368)
418 2pk3_A GDP-6-deoxy-D-LYXO-4-he 25.9 64 0.0022 30.8 4.7 35 1-41 12-46 (321)
419 2if2_A Dephospho-COA kinase; a 25.7 42 0.0014 30.1 3.2 23 1-25 1-23 (204)
420 3da7_A Barnase circular permut 25.6 50 0.0017 28.5 3.3 36 54-100 26-61 (111)
421 2qt1_A Nicotinamide riboside k 25.4 41 0.0014 30.4 3.0 37 2-44 22-58 (207)
422 3h75_A Periplasmic sugar-bindi 25.3 1.8E+02 0.0061 28.1 7.9 32 362-398 62-93 (350)
423 3evn_A Oxidoreductase, GFO/IDH 25.3 1.5E+02 0.0052 28.9 7.5 68 297-371 5-76 (329)
424 3u3x_A Oxidoreductase; structu 25.1 76 0.0026 31.8 5.3 93 297-394 26-142 (361)
425 2bd0_A Sepiapterin reductase; 25.0 45 0.0015 30.7 3.3 25 2-32 3-27 (244)
426 2h3h_A Sugar ABC transporter, 24.9 1.8E+02 0.0063 27.4 7.8 34 361-398 56-89 (313)
427 3bbl_A Regulatory protein of L 24.8 1.9E+02 0.0066 26.8 7.9 32 361-398 63-94 (287)
428 3grk_A Enoyl-(acyl-carrier-pro 24.6 57 0.0019 31.5 4.1 31 2-37 32-63 (293)
429 2gk4_A Conserved hypothetical 24.5 50 0.0017 31.9 3.5 39 2-40 4-52 (232)
430 2qh8_A Uncharacterized protein 24.3 1.8E+02 0.0062 27.5 7.6 84 298-398 141-227 (302)
431 2zkq_b 40S ribosomal protein S 24.3 1.7E+02 0.0057 29.4 7.4 76 299-398 73-148 (295)
432 2x7x_A Sensor protein; transfe 23.7 4.2E+02 0.015 25.0 10.3 33 361-397 61-93 (325)
433 4fs3_A Enoyl-[acyl-carrier-pro 23.6 68 0.0023 30.3 4.4 31 2-37 7-38 (256)
434 2vfb_A Arylamine N-acetyltrans 23.6 91 0.0031 30.6 5.4 53 22-74 76-133 (280)
435 3e70_C DPA, signal recognition 23.6 1.1E+02 0.0037 30.7 6.0 39 2-42 130-168 (328)
436 3kkj_A Amine oxidase, flavin-c 23.6 43 0.0015 29.3 2.7 28 15-42 9-36 (336)
437 2f6r_A COA synthase, bifunctio 23.5 51 0.0018 31.9 3.5 34 1-42 75-108 (281)
438 4id9_A Short-chain dehydrogena 23.5 62 0.0021 31.3 4.2 34 2-41 20-53 (347)
439 3qk7_A Transcriptional regulat 23.4 2.2E+02 0.0074 26.7 8.0 32 361-398 64-95 (294)
440 1uz5_A MOEA protein, 402AA lon 23.4 75 0.0026 33.0 4.9 45 111-166 226-271 (402)
441 1udb_A Epimerase, UDP-galactos 23.4 74 0.0025 30.7 4.6 28 4-37 3-30 (338)
442 4amg_A Snogd; transferase, pol 23.3 54 0.0019 32.2 3.7 37 1-40 23-59 (400)
443 3sc6_A DTDP-4-dehydrorhamnose 23.2 40 0.0014 31.8 2.6 33 1-39 4-37 (287)
444 3ic5_A Putative saccharopine d 23.1 89 0.0031 24.8 4.4 33 2-41 6-39 (118)
445 3awd_A GOX2181, putative polyo 23.1 73 0.0025 29.4 4.4 31 2-38 14-44 (260)
446 3p94_A GDSL-like lipase; serin 23.0 56 0.0019 28.7 3.4 60 118-185 59-125 (204)
447 3e9n_A Putative short-chain de 22.8 41 0.0014 31.3 2.5 30 2-38 6-35 (245)
448 3trf_A Shikimate kinase, SK; a 22.7 63 0.0022 28.3 3.7 24 2-27 6-29 (185)
449 3eag_A UDP-N-acetylmuramate:L- 22.4 1.2E+02 0.0043 29.8 6.2 59 2-64 109-174 (326)
450 4e5v_A Putative THUA-like prot 22.3 3.5E+02 0.012 26.3 9.4 90 296-401 3-96 (281)
451 1w5r_A Arylamine N-acetyltrans 22.3 94 0.0032 30.5 5.2 53 22-74 79-136 (278)
452 3m2p_A UDP-N-acetylglucosamine 22.3 78 0.0027 30.2 4.5 34 1-40 2-35 (311)
453 3d3q_A TRNA delta(2)-isopenten 22.3 1.1E+02 0.0036 31.2 5.7 44 2-52 8-54 (340)
454 4hv4_A UDP-N-acetylmuramate--L 22.2 81 0.0028 33.3 5.0 57 2-64 123-179 (494)
455 2fn9_A Ribose ABC transporter, 22.2 2.8E+02 0.0096 25.5 8.4 33 361-397 57-89 (290)
456 2q1w_A Putative nucleotide sug 22.1 88 0.003 30.3 4.9 34 1-40 21-54 (333)
457 1t2a_A GDP-mannose 4,6 dehydra 22.1 86 0.003 30.8 4.9 33 2-40 25-57 (375)
458 1rrv_A Glycosyltransferase GTF 22.1 78 0.0027 31.7 4.7 38 1-41 1-38 (416)
459 3rfq_A Pterin-4-alpha-carbinol 22.1 86 0.0029 29.0 4.6 46 111-166 68-114 (185)
460 1usg_A Leucine-specific bindin 21.9 3E+02 0.01 25.9 8.7 33 361-398 68-100 (346)
461 2xzm_B RPS0E; ribosome, transl 21.8 1.3E+02 0.0046 29.1 6.0 77 299-398 68-144 (241)
462 3kjx_A Transcriptional regulat 21.8 3.6E+02 0.012 25.8 9.4 31 361-397 123-153 (344)
463 1t0b_A THUA-like protein; treh 21.7 1.9E+02 0.0064 27.8 7.1 88 297-400 7-106 (252)
464 3d3w_A L-xylulose reductase; u 21.7 83 0.0028 28.8 4.4 32 2-39 8-39 (244)
465 3f9i_A 3-oxoacyl-[acyl-carrier 21.6 75 0.0026 29.4 4.1 31 2-38 15-45 (249)
466 3o74_A Fructose transport syst 21.5 2.6E+02 0.009 25.3 8.0 32 361-397 57-88 (272)
467 1ek6_A UDP-galactose 4-epimera 21.5 75 0.0026 30.7 4.3 30 2-37 3-32 (348)
468 1u7z_A Coenzyme A biosynthesis 21.5 55 0.0019 31.4 3.2 32 2-38 9-55 (226)
469 2ehd_A Oxidoreductase, oxidore 21.4 80 0.0027 28.8 4.2 32 2-39 6-37 (234)
470 3oml_A GH14720P, peroxisomal m 21.2 45 0.0015 36.3 2.8 31 2-38 20-50 (613)
471 2p4h_X Vestitone reductase; NA 21.2 83 0.0028 29.9 4.5 31 2-38 2-32 (322)
472 1n7h_A GDP-D-mannose-4,6-dehyd 21.1 90 0.0031 30.7 4.8 33 2-40 29-61 (381)
473 2qgz_A Helicase loader, putati 21.1 67 0.0023 31.6 3.9 61 2-64 153-223 (308)
474 1kew_A RMLB;, DTDP-D-glucose 4 21.1 85 0.0029 30.5 4.6 33 1-40 1-34 (361)
475 1sb8_A WBPP; epimerase, 4-epim 21.0 93 0.0032 30.3 4.9 33 1-39 27-59 (352)
476 3ruf_A WBGU; rossmann fold, UD 21.0 96 0.0033 30.0 4.9 33 2-40 26-58 (351)
477 4hv4_A UDP-N-acetylmuramate--L 21.0 4.1E+02 0.014 27.7 10.2 81 298-396 23-110 (494)
478 3kzv_A Uncharacterized oxidore 20.9 48 0.0016 31.1 2.6 29 2-36 3-33 (254)
479 4h08_A Putative hydrolase; GDS 20.8 85 0.0029 27.8 4.2 47 137-186 72-123 (200)
480 1qf9_A UMP/CMP kinase, protein 20.7 73 0.0025 27.7 3.6 25 1-27 6-30 (194)
481 3vps_A TUNA, NAD-dependent epi 20.6 90 0.0031 29.5 4.5 33 2-40 8-40 (321)
482 2b69_A UDP-glucuronate decarbo 20.5 88 0.003 30.3 4.5 33 1-39 27-59 (343)
483 1xg5_A ARPG836; short chain de 20.4 88 0.003 29.5 4.4 32 2-39 33-64 (279)
484 3j20_B 30S ribosomal protein S 20.3 1.5E+02 0.0051 28.0 5.9 76 299-398 66-141 (202)
485 2fep_A Catabolite control prot 20.3 4E+02 0.014 24.6 9.2 32 361-398 71-102 (289)
486 2ydy_A Methionine adenosyltran 20.1 83 0.0028 29.9 4.2 32 2-39 3-34 (315)
487 2gel_A Putative GRAM negative 20.1 1E+02 0.0035 29.2 4.8 40 361-400 54-95 (231)
488 3e8x_A Putative NAD-dependent 20.1 1E+02 0.0035 28.0 4.7 34 2-41 22-55 (236)
No 1
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=1.3e-193 Score=1544.31 Aligned_cols=504 Identities=46% Similarity=0.808 Sum_probs=485.7
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCccccccCC
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtmsp~~hgevfv~~dg~e~dldlg~yerf~~~ 80 (524)
||||||||||+|||||||+|||||+|||+|||+|++||||||||||||||||||||||||||||+||||||||||||||+
T Consensus 3 ~k~i~vtggv~s~lgkgi~~as~g~ll~~~g~~v~~~k~dpylnvd~gtmsp~~hgevfv~~dg~e~dldlg~yerf~~~ 82 (535)
T 3nva_A 3 NKYIVVTGGVLSSVGKGTLVASIGMLLKRRGYNVTAVKIDPYINVDAGTMNPYMHGEVFVTEDGAETDLDLGHYERFMDV 82 (535)
T ss_dssp CEEEEEECCCSTTTTHHHHHHHHHHHHHHTTCCEEEEEEECSSSSSSTTCCHHHHCCCEECTTCCEECTHHHHHHHHHCC
T ss_pred ceEEEEeCccccCcchHHHHHHHHHHHHHCCceEEEEecCcceeecCCCCCccccceEEEecCCccccccccchhhhcCC
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccCcchHH
Q 009814 81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFI 160 (524)
Q Consensus 81 ~~~~~~n~t~g~iy~~vi~ker~g~ylg~tvqviphit~ei~~~i~~~~~~~~d~~~~~~d~~i~eiggtvgdies~pf~ 160 (524)
+|||+||+||||||++||+|||||||||||||||||||||||+||+++|+ ..+|||||||||||||||||+|||
T Consensus 83 ~l~~~~n~ttg~iy~~vi~ker~g~ylg~tvqviphit~eik~~i~~~~~------~~~~dv~i~eiggtvgdies~pf~ 156 (535)
T 3nva_A 83 NMTKYNNITAGKVYFEVIKKEREGKYLGQTVQIIPHVTDQIKDMIRYASK------INNAEITLVEIGGTVGDIESLPFL 156 (535)
T ss_dssp CCCGGGEEEHHHHHHHHHHHHHTTTTTTCCCCHHHHHHHHHHHHHHHHHH------HHTCSEEEEEECSCTTSGGGHHHH
T ss_pred CcccccCcchhHHHHHHHHHHhcCCcCCCeeEECCCchHHHHHHHHHhhc------cCCCCEEEEEeCCccchhcccHHH
Confidence 99999999999999999999999999999999999999999999999995 468999999999999999999999
Q ss_pred HHHHHhhhhcCCCCEEEEEeeeeeeecCCCccccCCchhhHHHhhcCCCcccEEEEecCCCCCcchhccccccCCCCCCC
Q 009814 161 EALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQN 240 (524)
Q Consensus 161 ea~rq~~~~~~~~n~~~ih~~~vp~~~~~~e~ktkptq~sv~~lrs~Gi~pd~lv~R~~~~l~~~~r~KisLf~~v~~~~ 240 (524)
||+||||+++|++|+|||||||||||+++||+||||||||||+|||.|||||+|||||++++++++|+||||||||++++
T Consensus 157 ea~rq~~~~~g~~n~~~ih~tlvp~~~~~ge~ktkptqhsv~~Lrs~GIqPdilvcRs~~~l~~~~r~KiaLfc~V~~~~ 236 (535)
T 3nva_A 157 EAVRQLKLEEGEDNVIFVHIALVEYLSVTGELKTKPLQHSVQELRRIGIQPDFIVGRATLPLDDETRRKIALFTNVKVDH 236 (535)
T ss_dssp HHHHHHHHHHCTTTEEEEEEEECCBCTTTSSBCCHHHHHHHHHHHHHTCCCSEEEEEESSCCCHHHHHHHHHHTTCCGGG
T ss_pred HHHHHHHHHhCCCCEEEEEeeccceecCCCcccCCchHHHHHHHHhCCCCCCEEEEecCCCCCHHHHHhhhhhcCCChhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCccchhhHHHHHhhhHHHHHhhcCCCCCCChhhHHHHHHHHHhhc--CCCCCeEEEEEeccCCCcchHHHHHH
Q 009814 241 IITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQGTTKEPLLKEWTSRAEICD--GLHEPVRIAMVGKYTGLSDAYLSILK 318 (524)
Q Consensus 241 Vi~i~dvdtiy~vpl~LreqG~~~~i~~~l~l~~~~~~~~l~~W~~lv~~~~--~~~~~v~IaiVGkY~~~~day~SI~~ 318 (524)
||+++|+||||++|++||+||+++.++++|+|+ .+.++|++|+++++++. ++.++++||+||||+++.|+|.|+.+
T Consensus 237 VI~i~DvdtiY~vpl~L~~qGl~~~~~~~l~l~--~~~~~~~~w~~~~~~~~~~~~~~~v~IalVGKY~~l~DaY~Sv~e 314 (535)
T 3nva_A 237 IVSSYDVETSYEVPIILESQKLVSKILSRLKLE--DRQVDLTDWISFVNNIKGINSKKTINIALVGKYTKLKDSYISIKE 314 (535)
T ss_dssp EEEEECCSCGGGHHHHHHHHTHHHHHHHHTTCC--CCCCCCHHHHHHHHHHHTTTCCCEEEEEEEESCTTSGGGGHHHHH
T ss_pred eEecCCCChHHHhHHHHHHCCcHHHHHHHcCCC--CCCCCHHHHHHHHHHhhccCCCCeeEEEEEecCcCCchhHHHHHH
Confidence 999999999999999999999999999999997 36678999999999998 78889999999999999999999999
Q ss_pred HHHHcCCceeEEeeeEEeeCCCccccccCCChhhhhHHHHhccCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEEh
Q 009814 319 ALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (524)
Q Consensus 319 aL~~ag~~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~l~~~DGIllpGGfG~rg~eg~i~air~are~~iP~LGIC 398 (524)
||+|+|+++.+++++.||++++++..+. ++|+.+.++|||++|||||+++.+|+++++++|+++++|+||||
T Consensus 315 AL~hag~~~~~~V~I~wIds~~l~~~~~--------~~~~~L~~~DgIIlpGG~G~~~~~g~i~~ir~a~~~~~PiLGIC 386 (535)
T 3nva_A 315 AIYHASAYIGVRPKLIWIESTDLESDTK--------NLNEILGNVNGIIVLPGFGSRGAEGKIKAIKYAREHNIPFLGIC 386 (535)
T ss_dssp HHHHHHHHTTCEEEEEEEEGGGGCCSSS--------CCTTTTTSCSEEEECCCCSSTTHHHHHHHHHHHHHHTCCEEEET
T ss_pred HHHHHHHHcCCCeEEEEecchhcccccc--------chhhhccCCCEEEECCCCCCccHHHHHHHHHHHHHcCCcEEEEC
Confidence 9999999999999999999998865432 12467899999999999999999999999999999999999999
Q ss_pred HhHHHHHHHhccccccccCCCCcccCCCCCCCeeeeCCCCC-cCCCCCcccccceeeEeccCCcccccccCCcceeeeee
Q 009814 399 LGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGS-KTHMGGTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERH 477 (524)
Q Consensus 399 LGmQll~ie~gr~v~gl~~a~S~Ef~~~~~~pVi~l~~e~~-~~~~GgtmrLg~~~v~l~~g~s~~~~iYg~~~~I~erh 477 (524)
+|||+|++||||+++|+++|+|+||++.+++|++++|+++. ..++|||||||+|+|.+.++ |+++++|| +..|+|||
T Consensus 387 lG~Qll~va~Gg~v~g~qda~s~Ef~~~~~~pvI~~m~eq~~~~~~ggtmrlg~h~v~l~~g-S~L~~iyG-~~~I~erH 464 (535)
T 3nva_A 387 FGFQLSIVEFARDVLGLSEANSTEINPNTKDPVITLLDEQKNVTQLGGTMRLGAQKIILKEG-TIAYQLYG-KKVVYERH 464 (535)
T ss_dssp HHHHHHHHHHHHTTTCCTTCEETTTCTTCSCEEEECBCSSSCBCSSCCCCEEEEEEEEECTT-SHHHHHHT-SSEEEEEE
T ss_pred cchhHHHHHhhccccCccCCcccccCCCCCCCeeecchhcccccccCCccccCceEEEEcCC-CcHHHHhC-CCeeeecc
Confidence 99999999999999999999999999999999999999865 57899999999999999999 99999996 77899999
Q ss_pred ccccccChhhHHhhhcCCeEEEEEeCCCCeEEEEEECCCcE-EEEec
Q 009814 478 RHRYEVNPDMIARLENAGLSFTGKDETSQRMEVWTFNYKIA-VLLNY 523 (524)
Q Consensus 478 rHrYeVn~~~v~~l~~~Gl~~sg~~~dg~~VE~iE~~~hp~-f~vqy 523 (524)
||||+||+.+.+.+++.||+++|+++|| +||+||+++||| +.|||
T Consensus 465 rHryeVNs~h~q~l~~~GL~vsA~s~DG-~IEAIE~~~~pf~vGVQf 510 (535)
T 3nva_A 465 RHRYEVNPKYVDILEDAGLVVSGISENG-LVEIIELPSNKFFVATQA 510 (535)
T ss_dssp EECCEECHHHHHHHHHTTCEEEEECTTC-CEEEEECTTSSCEEEESS
T ss_pred cccceechHHHhhcccCCeEEEEEeCCC-CEEEEEeCCCCcEEEEEe
Confidence 9999999999999988999999999999 699999999995 89998
No 2
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A
Probab=100.00 E-value=1e-159 Score=1298.07 Aligned_cols=503 Identities=49% Similarity=0.822 Sum_probs=472.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCccccccCC
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtmsp~~hgevfv~~dg~e~dldlg~yerf~~~ 80 (524)
||||||||||+||+|||+++||||+||+++||+|+++|+||||||||||||||||||||||+||+|+||||||||||+++
T Consensus 12 ~~~i~v~gg~~s~~gk~~~~~~~~~~l~~~g~~v~~~k~~py~n~d~~~ms~~~hge~~vt~dg~e~~~~~g~~~~~~~~ 91 (550)
T 1vco_A 12 RKYVFITGGVVSSLGKGILTSSLGALLRARGYRVTAIKIDPYVNVDAGTMRPYEHGEVFVTADGAETDLDIGHYERFLDM 91 (550)
T ss_dssp CEEEEEEECSSSCSCHHHHHHHHHHHHHTTTCCEEEEEEECSSCSSGGGSCSSTTSCCEECTTCCEECTHHHHHHHHHTS
T ss_pred eeEEEEeCCcccCcchHHHHHHHHHHHHhCCceeeEeecccccccCccccCcccCCceEECCCCceehhhhccHHhcCCc
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccCcchHH
Q 009814 81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFI 160 (524)
Q Consensus 81 ~~~~~~n~t~g~iy~~vi~ker~g~ylg~tvqviphit~ei~~~i~~~~~~~~d~~~~~~d~~i~eiggtvgdies~pf~ 160 (524)
.|+++||+||||||++||+|||+|||||+|||||||||||||+||+++++ ..++||||||+||||||||||||+
T Consensus 92 ~l~~~~~~~~g~~~~~~~~~~~~~~y~~~~~~~~~~~~~~i~~~~~~~~~------~~~~d~~i~e~~gt~~di~~~~~~ 165 (550)
T 1vco_A 92 DLSRGNNLTTGQVYLSVIQKERRGEYLSQTVQVIPHITDEIKERIRKVAE------EQKAEIVVVEVGGTVGDIESLPFL 165 (550)
T ss_dssp CCCGGGEEEHHHHHHHHHHHHHTTTTTTCCCCTTTHHHHHHHHHHHHHHH------HTTCSEEEEEECSCTTSSTTHHHH
T ss_pred ccCCCCCeeccEEchhhhhhhcccccccCceEEhhHHHHHHHHHHHHHhc------ccCCCEEEEECCCChhHhhhHHHH
Confidence 99999999999999999999999999999999999999999999999984 457999999999999999999999
Q ss_pred HHHHHhhhhcCCCCEEEEEeeeeeeecCCCccccCCchhhHHHhhcCCCcccEEEEecCCCCCcchhccccccCCCCCCC
Q 009814 161 EALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQN 240 (524)
Q Consensus 161 ea~rq~~~~~~~~n~~~ih~~~vp~~~~~~e~ktkptq~sv~~lrs~Gi~pd~lv~R~~~~l~~~~r~KisLf~~v~~~~ 240 (524)
||+||||+++|++|+|||||||||||+++||+|||||||||++|||.|||||++|||++++++++||+|+||||||++++
T Consensus 166 ~~~rq~~~~~~~~~~~~~h~~~~p~~~~~~e~ktkptq~sv~~lrs~gi~pd~lvvR~~~~~~~~~r~k~sL~~~v~~~~ 245 (550)
T 1vco_A 166 EAIRQFRFDEGEGNTLYLHLTLVPYLETSEEFKTKPTQHSVATLRGVGIQPDILVLRSARPVPEEVRRKVALFTNVRPGH 245 (550)
T ss_dssp HHHHTHHHHHCTTSEEEEEEEECCEETTTTEECCHHHHHHHHHHHHTTCCCSEEEEEESSCCCHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHhHhhCcCCEEEEEEeCeecccCCCCcCCCCcchhHHHHhcCCCccCEEEEeCCCCCCcchhcccchhcCCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCccchhhHHHHHhhhHHHHHhhcCCCCCCChhhHHHHHHHHHhhcCCCCCeEEEEEeccCCCcchHHHHHHHH
Q 009814 241 IITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQGTTKEPLLKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKAL 320 (524)
Q Consensus 241 Vi~i~dvdtiy~vpl~LreqG~~~~i~~~l~l~~~~~~~~l~~W~~lv~~~~~~~~~v~IaiVGkY~~~~day~SI~~aL 320 (524)
||++.|+||||+||++||+||++++++++++++ ...++++.|.+++.++.++..+++|+++|||..+.|+|.|+.++|
T Consensus 246 Vi~~~dvdt~y~lp~~lr~~G~~~~v~~~~~l~--~~~~~l~~w~~~~~~~~~~~~~v~I~ivgkyv~l~D~y~Sv~~aL 323 (550)
T 1vco_A 246 VFSSPTVEHLYEVPLLLEEQGLGRAVERALGLE--AVIPNLSFWQEAVRVLKHPERTVKIAIAGKYVKMPDAYLSLLEAL 323 (550)
T ss_dssp EEEEECCSCTTHHHHHHHHHTHHHHHHHHTTCC--CCCCCCHHHHHHHHHHHSCSEEEEEEEEESCC---CTTHHHHHHH
T ss_pred eeecCCCChHHHHHHHHHHcCChhhhHhhCCCC--chhHHHHHhHHHHHhhcCCCCceEEcccCCeEEEEecHHHHHHHH
Confidence 999999999999999999999999999999986 355688899999999998888899999999999999999999999
Q ss_pred HHcCCceeEEeeeEEeeCCCccccccCCChhhhhHHHHhccCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEEhHh
Q 009814 321 LHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLG 400 (524)
Q Consensus 321 ~~ag~~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~l~~~DGIllpGGfG~rg~eg~i~air~are~~iP~LGICLG 400 (524)
.+++.+.++++++.|++++++++++ +++.+.++||||||||||+|+.+|+++++++|+++++|+||||||
T Consensus 324 ~~~g~~~g~~v~I~~~d~~~~~~~~----------~~~~L~~~DGIILpGGfGd~~~~g~i~~ir~a~e~~iPiLGICLG 393 (550)
T 1vco_A 324 RHAGIKNRARVEVKWVDAESLEAAD----------LEEAFRDVSGILVPGGFGVRGIEGKVRAAQYARERKIPYLGICLG 393 (550)
T ss_dssp HHHHHHTTEEEEEEEEEGGGC--CC----------HHHHTTTCSCEEECCCCSSTTHHHHHHHHHHHHHTTCCEEEETHH
T ss_pred HHHHHHcCCeEEEEEeCccccccch----------HHHHHhcCCEEEECCCCCCcchhhhHHHHHHHHHCCCcEEEECcC
Confidence 9999999999999999987664322 245678999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccccccccCCCCcccCCCCCCCeeeeCCCC-CcCCCCCcccccceeeEeccCCcccccccCCcceeeeeecc
Q 009814 401 MQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEG-SKTHMGGTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRH 479 (524)
Q Consensus 401 mQll~ie~gr~v~gl~~a~S~Ef~~~~~~pVi~l~~e~-~~~~~GgtmrLg~~~v~l~~g~s~~~~iYg~~~~I~erhrH 479 (524)
||+|+++||++++++++++|+||+++++||++.+++++ +++|+|++||+|.++|.+.++ |++.++|+ +..|.+||||
T Consensus 394 mQlL~~a~Gg~v~~l~~~~s~E~~~~~~hpvi~~~~~q~~i~~~ggtmrlG~~~v~i~~~-s~l~~iy~-~~~v~e~h~H 471 (550)
T 1vco_A 394 LQIAVIEFARNVAGLKGANSTEFDPHTPHPVIDLMPEQLEVEGLGGTMRLGDWPMRIKPG-TLLHRLYG-KEEVLERHRH 471 (550)
T ss_dssp HHHHHHHHHHHTSCCTTCEETTTCTTCSCEEEEESCGGGCC---CCCCEEEEEEEEECTT-SHHHHHHC-CSEEEEEEEE
T ss_pred HHHHHHHhCcccccCCccccccccCCCCCCeEEeccccccccccCCcccccceEEEEccC-chhhHhcC-Cceeeeeccc
Confidence 99999999999999999999999999999999999864 578999999999999999988 99999996 6778899999
Q ss_pred ccccChhhHHhhhcCCeEEEEEeCC-----CCeEEEEEECCCcEE-EEec
Q 009814 480 RYEVNPDMIARLENAGLSFTGKDET-----SQRMEVWTFNYKIAV-LLNY 523 (524)
Q Consensus 480 rYeVn~~~v~~l~~~Gl~~sg~~~d-----g~~VE~iE~~~hp~f-~vqy 523 (524)
+|+||+.+.+.+++.|++++|+++| +.++|+||+++|||| +|||
T Consensus 472 ~Y~Vns~~~~~l~~~gl~v~a~s~dG~g~~~~~VeaIe~~~~p~fvGVQF 521 (550)
T 1vco_A 472 RYEVNPLYVDGLERAGLVVSATTPGMRGRGAGLVEAIELKDHPFFLGLQS 521 (550)
T ss_dssp SEEECHHHHHHHHHHTEEEEEECCCBTTBSTTCEEEEEETTSSSEEEESS
T ss_pred eEEEchHHhhccccCCeEEEEEeCCCCccCCCcEEEEEeCCCCEEEEEEe
Confidence 9999999988886679999999999 558999999999999 9998
No 3
>1s1m_A CTP synthase; CTP synthetase, UTP:ammonia ligase (ADP-forming), cytidine 5 triphosphate synthase, ammonia lyase; 2.30A {Escherichia coli} SCOP: c.23.16.1 c.37.1.10 PDB: 2ad5_A*
Probab=100.00 E-value=7.4e-158 Score=1282.32 Aligned_cols=500 Identities=48% Similarity=0.798 Sum_probs=469.2
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCccccccCC
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtmsp~~hgevfv~~dg~e~dldlg~yerf~~~ 80 (524)
||||||||||+||+|||+++||||+||+++||+|+++|+|||||||||||||+||||||||+||+|+||||||||||+|+
T Consensus 3 ~~~i~v~gg~~s~~gk~~~~~~l~~~l~~~g~~v~~~k~~py~n~d~~~ms~~~hge~~vt~dg~e~~~~~~~~~~~~~~ 82 (545)
T 1s1m_A 3 TNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRT 82 (545)
T ss_dssp CEEEEEEECSSSCSCHHHHHHHHHHHHHTTTCCEEEEEEECCSCSCGGGSCTTTSCCCEECTTSCEECTHHHHHHHHCSS
T ss_pred ceEEEEeCCcccCcchHHHHHHHHHHHHhCCceeeeeeccccccCCCCccCcccCCCeEECCCCCeehhhhccceeeece
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccCcchHH
Q 009814 81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFI 160 (524)
Q Consensus 81 ~~~~~~n~t~g~iy~~vi~ker~g~ylg~tvqviphit~ei~~~i~~~~~~~~d~~~~~~d~~i~eiggtvgdies~pf~ 160 (524)
.|+++||+|+||||++||+|||+|+|+|+|||++||||||||+||+++++ ++||||||+||||||||||||+
T Consensus 83 ~l~~~~~~~~g~~~~~~~~~~~~~~y~~~~~~~~~~~~~~i~~~~~~~~~--------~~d~~i~e~~gt~~di~~~~~~ 154 (545)
T 1s1m_A 83 KMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGE--------GHDVVLVEIGGTVGDIESLPFL 154 (545)
T ss_dssp CCCGGGEEEHHHHHHHHHHHHHTTTTTTCCCCHHHHHHHHHHHHHHHHHT--------TCSEEEEEECSCTTSSTTHHHH
T ss_pred eecCCCCeeccEEeeehhhhccccccccCceeehhHHHHHHHHHHHHHhc--------cCCEEEEECCCChhhhhChHHH
Confidence 99999999999999999999999999999999999999999999999983 7899999999999999999999
Q ss_pred HHHHHhhhhcCCCCEEEEEeeeeeeecCCCccccCCchhhHHHhhcCCCcccEEEEecCCCCCcchhccccccCCCCCCC
Q 009814 161 EALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQN 240 (524)
Q Consensus 161 ea~rq~~~~~~~~n~~~ih~~~vp~~~~~~e~ktkptq~sv~~lrs~Gi~pd~lv~R~~~~l~~~~r~KisLf~~v~~~~ 240 (524)
||+||||+++|++|+|||||||||||+++||+|||||||||++|||.|||||+||||++++++++||+|+||||||++++
T Consensus 155 ~~~~q~~~~~~~~~~~~~h~~~~p~~~~~ge~ktkptq~sv~~l~s~gi~pd~lv~R~~~~~~~~~r~kisL~~~v~~~~ 234 (545)
T 1s1m_A 155 EAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKA 234 (545)
T ss_dssp HHHHHHHHHHCTTSEEEEEEEECCEETTTTEECCHHHHHHHHHHHTTTCCCSEEEEEESSCCCHHHHHHHHHTTCCCSSC
T ss_pred HHHHHHhHhhCcCcEEEEEEeCcccccCCCCcCCCCCcCCHHHHhCCCCccCEEEEeCCCCCCchhhccCChhhCccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCccchhhHHHHHhhhHHHHHhhcCCCCCCChhhHHHHHHHHHhhcCCCCCeEEEEEeccCCCcchHHHHHHHH
Q 009814 241 IITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQGTTKEPLLKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKAL 320 (524)
Q Consensus 241 Vi~i~dvdtiy~vpl~LreqG~~~~i~~~l~l~~~~~~~~l~~W~~lv~~~~~~~~~v~IaiVGkY~~~~day~SI~~aL 320 (524)
||+++|+||||+||++||+||++++++++++++ ...+++++|++++++++++...++||++|||..+.|+|.|+.++|
T Consensus 235 Vi~~~dvdt~y~lp~~lr~~G~~~~ii~~~~l~--~~~~~l~~w~~lv~~v~~~~~~v~i~~vGkyv~l~D~y~Si~~aL 312 (545)
T 1s1m_A 235 VISLKDVDSIYKIPGLLKSQGLDDYICKRFSLN--CPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEAL 312 (545)
T ss_dssp EEEEECCSCGGGHHHHHHHTTHHHHHHHHTTCC--CCCCCCHHHHHHHHHHHCCSEEEEEEEEESSCSSGGGGHHHHHHH
T ss_pred ceecCCCChHHHHHHHHHHcCChhhhhhhCCCC--chhHHHHHHHHHHHhccCCCCeEEeCCcCCeEEEEEHHHHHHHHH
Confidence 999999999999999999999999999999986 345688999999999999888899999999999999999999999
Q ss_pred HHcCCceeEEeeeEEeeCCCccccccCCChhhhhHHHHhccCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEEhHh
Q 009814 321 LHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLG 400 (524)
Q Consensus 321 ~~ag~~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~l~~~DGIllpGGfG~rg~eg~i~air~are~~iP~LGICLG 400 (524)
+++|+++++++.+.|+++++++.+ +++.+.++||||||||||+|+.+++++++++++++++|+||||||
T Consensus 313 ~~~G~~~~~~V~i~~~d~e~i~~~-----------~~~~l~~~DGIilsGGpg~~~~~g~~~~i~~a~~~~~PiLGIClG 381 (545)
T 1s1m_A 313 KHGGLKNRVSVNIKLIDSQDVETR-----------GVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLG 381 (545)
T ss_dssp HHHHHHHTEEEEEEEEEHHHHHHH-----------CTTTTTTCSEEEECCCCSSTTHHHHHHHHHHHHHTTCCEEEETHH
T ss_pred HHhCcccCCeEEEccCCHHHhhhh-----------hhhhhhcCCEEEECCCCCCccchhhHHHHHHHHHCCCcEEEECCh
Confidence 999999888889999987654310 113467899999999999999999999999999999999999999
Q ss_pred HHHHHHHhccccccccCCCCcccCCCCCCCeeeeC----------CCC-CcCCCCCcccccceeeEeccCCcccccccCC
Q 009814 401 MQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFM----------PEG-SKTHMGGTMRLGSRRTYFQIKDCKSAKLYGN 469 (524)
Q Consensus 401 mQll~ie~gr~v~gl~~a~S~Ef~~~~~~pVi~l~----------~e~-~~~~~GgtmrLg~~~v~l~~g~s~~~~iYg~ 469 (524)
||+|++||||+++++++++|+||+++++||++.++ +++ ...++|||||+|.++|.+.++ |++.++|+
T Consensus 382 ~Qll~va~Gg~v~~l~~a~s~E~~~~~~hpvi~l~~~w~~~~g~~~~q~~~~~~ggtmrlG~~~v~l~~~-s~l~~iyg- 459 (545)
T 1s1m_A 382 MQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDD-SLVRQLYN- 459 (545)
T ss_dssp HHHHHHHHHHHHHCCTTCEETTTCSSCSCEEEECTTTCCCTTSCCC----------CCEEEEEEEEECTT-CHHHHHTT-
T ss_pred HHHHHHHhCCceecCCCCcccccCCCCCCceEEeecccccccccccccccccccCccccccceeeEeccC-CHHHHhcC-
Confidence 99999999999999999999999999999999988 432 346889999999999999998 99999996
Q ss_pred cceeeeeeccccccChhhHHhhhcCCeEEEEEeCCCCeEEEEEECCCcEE-EEec
Q 009814 470 RTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEVWTFNYKIAV-LLNY 523 (524)
Q Consensus 470 ~~~I~erhrHrYeVn~~~v~~l~~~Gl~~sg~~~dg~~VE~iE~~~hp~f-~vqy 523 (524)
+..|.+||||||+||+.+.+.+++.|++++|+++||.++|++|+++|||| +|||
T Consensus 460 ~~~v~e~h~Hry~VNs~~~~~l~~~gl~v~a~s~dg~~VEaie~~~~p~flGVQF 514 (545)
T 1s1m_A 460 APTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQF 514 (545)
T ss_dssp SSEEEEEEEECCEECHHHHHHHHHTTCEEEEECSSSCCEEEEECTTSSSEEEESS
T ss_pred CceEEEecCcceEEChHHhhhcccCCeEEEEECCCCCceEEEEeCCCCEEEEEeC
Confidence 67788999999999999999887789999999999978999999999999 9998
No 4
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=100.00 E-value=1.9e-145 Score=1067.35 Aligned_cols=272 Identities=67% Similarity=1.118 Sum_probs=229.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCccccccCC
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtmsp~~hgevfv~~dg~e~dldlg~yerf~~~ 80 (524)
||||||||||+|||||||+|||||+|||+|||+|++||||||||||||||||||||||||||||+||||||||||||||+
T Consensus 23 mKyIfVTGGVvSglGKGi~aaSlG~LLk~rG~~Vt~~KiDPYlNvD~GTMsP~qHGEVfVtdDG~EtDLDLGhYERFl~~ 102 (294)
T 2c5m_A 23 MKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYINIDAGTFSPYEHGEVFVLDDGGEVDLDLGNYERFLDI 102 (294)
T ss_dssp CEEEEEEECSSTTSCHHHHHHHHHHHHHTTTCCEECCEEECBCCCCC---------------------------------
T ss_pred eEEEEEcCccccccchHHHHHHHHHHHHHCCCeeEEEecCCceeecCCCCCccccceEEEecCCccccccccchhhhcCC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccCcchHH
Q 009814 81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFI 160 (524)
Q Consensus 81 ~~~~~~n~t~g~iy~~vi~ker~g~ylg~tvqviphit~ei~~~i~~~~~~~~d~~~~~~d~~i~eiggtvgdies~pf~ 160 (524)
+|+++||+||||||++||+|||||||||||||||||||||||+||+++|++|||+++.+|||||||||||||||||+||+
T Consensus 103 ~lt~~nNiTtGkIY~~VI~KERrGdYLGkTVQVIPHiTdeIk~~I~~~a~~pvd~~~~~~Dv~IiEiGGTVGDIES~PFl 182 (294)
T 2c5m_A 103 RLTKDNNLTTGKIYQYVINKERKGDYLGKTVQVVPHITDAIQEWVMRQALIPVDEDGLEPQVCVIELGGTVGDIESMPFI 182 (294)
T ss_dssp --CCTTEEEHHHHHHHHHHHHHTSCSCSSCCCTTTHHHHHHHHHHHHHTTCC------CCSEEEEEECSCTTCSTTHHHH
T ss_pred CCcccccccHHHHHHHHHHHHhcCCcCCceeEEcCCchHHHHHHHHHHhcCCccccCCCCCEEEEEeCCcchhhcccHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhcCCCCEEEEEeeeeeeecCCCccccCCchhhHHHhhcCCCcccEEEEecCCCCCcchhccccccCCCCCCC
Q 009814 161 EALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQN 240 (524)
Q Consensus 161 ea~rq~~~~~~~~n~~~ih~~~vp~~~~~~e~ktkptq~sv~~lrs~Gi~pd~lv~R~~~~l~~~~r~KisLf~~v~~~~ 240 (524)
||+||||+++|++|+||||||||||++++||+||||||||||+|||+|||||+|+|||+.|++++.|+||||||+|++++
T Consensus 183 EAiRQ~~~~~g~~n~~~iHvtlVP~i~~~gE~KTKPTQhSVk~Lr~~Gi~PDiivcRse~~l~~~~k~KIalfc~V~~~~ 262 (294)
T 2c5m_A 183 EAFRQFQFKVKRENFCNIHVSLVPQPSSTGEQKTKPTQNSVRELRGLGLSPDLVVCRCSNPLDTSVKEKISMFCHVEPEQ 262 (294)
T ss_dssp HHHHTTTTTSCTTTEEEEEEEECCCCTTTCSCCCHHHHHHHHHHHHTTCCCSEEEEECSSCCCTTHHHHHHHTTTCCCSC
T ss_pred HHHHHHHHHhCCCCEEEEEeeccceecCCCcccCCCcHHHHHHHHHcCCCCCEEEEecCCCCCHHHHHHHHHhcCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCccchhhHHHHHhhhHHHHHhhcCC
Q 009814 241 IITLYDVPNIWHIPLLLRDQKAHEAIFKVLNL 272 (524)
Q Consensus 241 Vi~i~dvdtiy~vpl~LreqG~~~~i~~~l~l 272 (524)
||+++|++|+|+||++|++||+++.++++|+|
T Consensus 263 Vi~~~D~~~IY~VPl~l~~qgl~~~i~~~L~l 294 (294)
T 2c5m_A 263 VICVHDVSSIYRVPLLLEEQGVVDYFLRRLDL 294 (294)
T ss_dssp CEECCCCSCGGGHHHHHHTTTHHHHHHHHTTC
T ss_pred EEecCCcchHHHhhHHHHHCChHHHHHHHhCc
Confidence 99999999999999999999999999999875
No 5
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=100.00 E-value=9.5e-144 Score=1063.42 Aligned_cols=273 Identities=66% Similarity=1.114 Sum_probs=231.5
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCccccccCC
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtmsp~~hgevfv~~dg~e~dldlg~yerf~~~ 80 (524)
||||||||||+|||||||+|||||+|||+|||+|+++|||||||||||||||||||||||||||+||||||||||||||+
T Consensus 23 ~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DPYlNvD~GTMsP~qHGEVfVtdDG~EtDLDLGhYERFl~~ 102 (295)
T 2vo1_A 23 MKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYINIDAGTFSPYEHGEVFVLDDGGEVDLDLGNYERFLDI 102 (295)
T ss_dssp CEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEECSSCCC----------------------------------
T ss_pred ceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeecccceecCCCCCChhhhceEEeecccccccccccchHhhccC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccCcchHH
Q 009814 81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFI 160 (524)
Q Consensus 81 ~~~~~~n~t~g~iy~~vi~ker~g~ylg~tvqviphit~ei~~~i~~~~~~~~d~~~~~~d~~i~eiggtvgdies~pf~ 160 (524)
+|+++||+||||||++||+|||||||||||||||||||||||+||+++|.+|+|+++.+|||||||||||||||||+|||
T Consensus 103 ~l~~~~niTtGkiY~~Vi~kERrGdYLG~TVQvIPHiTdeIk~~I~~~a~~~~~~~~~~~Dv~IvEiGGTVGDIEs~PFl 182 (295)
T 2vo1_A 103 RLTKDNNLTTGKIYQYVINKERKGDYLGKTVQVVPHITDAIQEWVMRQALIPVDEDGLEPQVCVIELGGTVGDIESMPFI 182 (295)
T ss_dssp -----CEEEHHHHHHHHHHHHHTTTTTTCCCCHHHHHHHHHHHHHHHHHHSCCSSSCCCCSEEEEEECSCTTCGGGHHHH
T ss_pred CcCccccccHHHHHHHHHHHHHcCCCCCCeEEecCChhhHHHHHHHHhhcccccccCCCCCEEEEEcCceeccccccHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhcCCCCEEEEEeeeeeeecCCCccccCCchhhHHHhhcCCCcccEEEEecCCCCCcchhccccccCCCCCCC
Q 009814 161 EALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQN 240 (524)
Q Consensus 161 ea~rq~~~~~~~~n~~~ih~~~vp~~~~~~e~ktkptq~sv~~lrs~Gi~pd~lv~R~~~~l~~~~r~KisLf~~v~~~~ 240 (524)
||+||||+++|++|+||||||||||++++||+||||||||||+|||+|||||+|||||+.|++++.|+||||||+|++++
T Consensus 183 EAiRQ~~~~~g~~n~~~iHvtlvP~l~~~gE~KTKPTQhSVkeLr~~GIqPDiivcRse~pl~~~~k~KIAlFCnV~~~~ 262 (295)
T 2vo1_A 183 EAFRQFQFKVKRENFCNIHVSLVPQPSSTGEQKTKPTQNSVRELRGLGLSPDLVVCRCSNPLDTSVKEKISMFCHVEPEQ 262 (295)
T ss_dssp HHHHHHHHHSCGGGEEEEEEEECCCCCC-CCCCCHHHHHHHHHHHHHTCCCSEEEEECSSCCCHHHHHHHHHHTTSCGGG
T ss_pred HHHHHHHHhhcccceeEEEeeccccccccccccccchHhHHHHHHhcCCCCCeeeecCCCCCCHHHHHHHHHccCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCccchhhHHHHHhhhHHHHHhhcCCC
Q 009814 241 IITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQ 273 (524)
Q Consensus 241 Vi~i~dvdtiy~vpl~LreqG~~~~i~~~l~l~ 273 (524)
||+++|++|||+||++|++||+++.++++|+|+
T Consensus 263 VI~~~Dv~sIYeVPl~L~~qgl~~~i~~~L~LP 295 (295)
T 2vo1_A 263 VICVHDVSSIYRVPLLLEEQGVVDYFLRRLDLP 295 (295)
T ss_dssp EEEECCCSSGGGHHHHHHHTTHHHHHHHHHTCC
T ss_pred EEEcCCcCcHHHHHHHHHHCCchHHHHHHcCCC
Confidence 999999999999999999999999999999985
No 6
>2v4u_A CTP synthase 2; pyrimidine biosynthesis, glutamine amidotransferase, glutaminase domain, 5-OXO-L-norleucine, DON, ligase, phosphoprotein; HET: CYD; 2.3A {Homo sapiens} PDB: 2vkt_A
Probab=100.00 E-value=1.2e-40 Score=337.84 Aligned_cols=240 Identities=48% Similarity=0.774 Sum_probs=200.7
Q ss_pred HHHHHHHhhcCCCCCeEEEEEeccCCCcchHHHHHHHHHHcCCceeEEeeeEEeeCCCccccccCCChhhhhHHHHhccC
Q 009814 283 EWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKG 362 (524)
Q Consensus 283 ~W~~lv~~~~~~~~~v~IaiVGkY~~~~day~SI~~aL~~ag~~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~l~~ 362 (524)
-|+.+++++.++..+++|+++|+|.+..++|.|+.++|+++|+.+...+.+.|+++++++......+++.|+++|+.+.+
T Consensus 11 ~~~~~~~~~~~~~~~~~Iavv~d~~~~~~s~~si~~~L~~~G~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 90 (289)
T 2v4u_A 11 VDLGTENLYFQSMKICSIALVGKYTKLRDCYASVFKALEHSALAINHKLNLMYIDSIDLEKITETEDPVKFHEAWQKLCK 90 (289)
T ss_dssp ------------CEEEEEEEEESCSSCCGGGHHHHHHHHHHHHHTTEEEEEEEEEGGGGSHHHHHHCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCcCCceEEEEEecCcCCCccHHHHHHHHHHhhhhhCCceEEEEechhhcccccccCChhhhhhHHHHHhh
Confidence 59999999998877899999999976888899999999999999888889999998766432222356668888888889
Q ss_pred CCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEEhHhHHHHHHHhccccccccCCCCcccCCCCCCCeeeeCCCCCcCC
Q 009814 363 ADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTH 442 (524)
Q Consensus 363 ~DGIllpGGfG~rg~eg~i~air~are~~iP~LGICLGmQll~ie~gr~v~gl~~a~S~Ef~~~~~~pVi~l~~e~~~~~ 442 (524)
+||||||||||++...+.++++++++++++|+||||+|||+|+.++|++++|++++++.|++++.++|++.+|++....+
T Consensus 91 ~dgiil~GG~~~~~~~~~~~~i~~~~~~~~PilGIC~G~Q~l~~a~Gg~v~~~~~~~~~e~~~~~~~~~i~~~~~h~~~~ 170 (289)
T 2v4u_A 91 ADGILVPGGFGIRGTLGKLQAISWARTKKIPFLGVXLGMQLAVIEFARNCLNLKDADSTEFRPNAPVPLVIDMPEHNPGN 170 (289)
T ss_dssp CSEEEECSCCSSTTHHHHHHHHHHHHHTTCCEEEETHHHHHHHHHHHHHHSCCTTEEESTTCTTCSEEEEEECCBCCTTC
T ss_pred CCEEEecCCCCchhHHHHHHHHHHHHHcCCcEEEECccHHHHHHHHhccccccccCcccccCccccccceecchhhcccc
Confidence 99999999999988889999999999999999999999999999999999999999999999888899999998765556
Q ss_pred CCCcccccceeeEec-cCCcccccccCCcceeeeeeccccccChhhHHhhhcCCeEEEEEeCCCCeEEEEEECCCcEE-E
Q 009814 443 MGGTMRLGSRRTYFQ-IKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEVWTFNYKIAV-L 520 (524)
Q Consensus 443 ~GgtmrLg~~~v~l~-~g~s~~~~iYg~~~~I~erhrHrYeVn~~~v~~l~~~Gl~~sg~~~dg~~VE~iE~~~hp~f-~ 520 (524)
+|++||+|.+++.+. ++ +.+.++|+....|+++|+|||+||++++..+.+.|++++|+++|+.++|++|++++||+ .
T Consensus 171 ~~~~~~~g~~~v~~~~~~-s~l~~~~~~~~~v~~~H~H~y~vn~~~v~~l~~~g~~v~A~s~dg~~ieaie~~~~p~~lG 249 (289)
T 2v4u_A 171 LGGTMRLGIRRTVFKTEN-SILRKLYGDVPFIEERHRHRFEVNPNLIKQFEQNDLSFVGQDVDGDRMEIIELANHPYFVG 249 (289)
T ss_dssp SSCBCEEEEEEEEESCSC-CHHHHHTTSCSEEEEEEEECEEECGGGSGGGTTSSEEEEEEETTSCSEEEEEESSSSCEEE
T ss_pred cCCccccceEEEEEecCC-CHHHHhcCCCceEEEecccccccCHHHHHhcccCCeEEEEEcCCCCeEEEEEcCCCCeEEE
Confidence 789999999999997 67 88999996335788999999999999998885579999999988856999999999987 9
Q ss_pred Eec
Q 009814 521 LNY 523 (524)
Q Consensus 521 vqy 523 (524)
|||
T Consensus 250 vQf 252 (289)
T 2v4u_A 250 VQF 252 (289)
T ss_dssp ESS
T ss_pred EEC
Confidence 998
No 7
>2w7t_A CTP synthetase, putative cytidine triphosphate synthase; glutaminase domain, trypsanosoma brucei, ligase, acivicin; HET: 5CS; 2.10A {Trypanosoma brucei}
Probab=100.00 E-value=3.6e-37 Score=309.82 Aligned_cols=218 Identities=41% Similarity=0.662 Sum_probs=185.9
Q ss_pred CeEEEEEecc-CCCcchHHHHHHHHHHcCCceeEEeeeEEeeCCCccccccCCChhhhhHHHHhccCCCEEEECCCCCCC
Q 009814 297 PVRIAMVGKY-TGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR 375 (524)
Q Consensus 297 ~v~IaiVGkY-~~~~day~SI~~aL~~ag~~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~l~~~DGIllpGGfG~r 375 (524)
+++|||+||| ..+.|+|.|+.++|++++.++.+++.+.|+++++++..+ . ..+++.+.++||||||||||++
T Consensus 8 ~~~Iaivg~y~~~~~dny~S~~~aL~~~g~~~~~~v~v~~~~~~~~~~~~----~---~~~~~~~~~~dgiil~GG~~~~ 80 (273)
T 2w7t_A 8 TVRIAFVGKYLQDAGDTYFSVLQCFEHCQIALQVRLDILYVDSEELEGPN----A---DEARKALLGCDGIFVPGGFGNR 80 (273)
T ss_dssp CEEEEEEECCHHHHTTTTHHHHHHHHHHHHHHTCCEEEEEEEGGGGSSTT----T---HHHHHHHHTCSEEEECCCCTTT
T ss_pred CCEEEEEeCCCcCCchHHHHHHHHHHHHHHhcCCceEEeccChhhccccc----c---hhHHHHHhhCCEEEecCCCCCc
Confidence 3899999999 577899999999999999999888999999987654311 0 0022457789999999999999
Q ss_pred chhHHHHHHHHHHHcCCCEEEEhHhHHHHHHHhccccccccCCCCcccCCCCCCCeeeeCCCCCcCCCCCcccccceeeE
Q 009814 376 GVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTY 455 (524)
Q Consensus 376 g~eg~i~air~are~~iP~LGICLGmQll~ie~gr~v~gl~~a~S~Ef~~~~~~pVi~l~~e~~~~~~GgtmrLg~~~v~ 455 (524)
..++.+.++++++++++|+||||+|||+|+++||+++.++++++|+|+++++++|++.+++ .....++++|++|.+++.
T Consensus 81 ~~~~~~~~i~~~~~~~~PilGIC~G~Qll~~a~Gg~v~~~~~~~s~E~~~~~~~~~l~~~~-~~~~~~~~~~~~g~~~v~ 159 (273)
T 2w7t_A 81 GVDGKCAAAQVARMNNIPYFGVXLGMQVAVIELSRNVVGWSDANSEEFNKESTHQVVRIMD-CDRNKMGANMHLGACDVY 159 (273)
T ss_dssp THHHHHHHHHHHHHHTCCEEEETHHHHHHHHHHHHHTTCCTTCEETTTCTTCSCEEEECCG-GGBCSSCBCCEEEEEEEE
T ss_pred CchhHHHHHHHHHHCCCcEEEECcCHHHHHHHHhCccccccCCchhhcccccCCCceeecc-ccccccCCcccccceEEE
Confidence 8889999999999999999999999999999999999999999999998888889887773 333445678899999999
Q ss_pred ec-cCCcccccccCCcceeeeeeccccccChhhHHhhhcCCeEEEEEeCC----CCeEEEEEECCCcEE-EEec
Q 009814 456 FQ-IKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDET----SQRMEVWTFNYKIAV-LLNY 523 (524)
Q Consensus 456 l~-~g~s~~~~iYg~~~~I~erhrHrYeVn~~~v~~l~~~Gl~~sg~~~d----g~~VE~iE~~~hp~f-~vqy 523 (524)
+. ++ +.+.++|+....++++|+|||+||+++++.++..|++++|+++| +..+|+||+++|||+ .|||
T Consensus 160 ~~~~~-s~l~~~~~~~~~v~~~H~Hsy~v~~~~v~~l~~~g~~v~A~s~d~~~~g~~ieaie~~~~p~~~GvQf 232 (273)
T 2w7t_A 160 IVEKS-SIMAKIYSKSNIVVERHRHRYEVNTAYFEDLRKAGLCISAVTDPTFSSRCRVEAVENPSLRFFLAVQF 232 (273)
T ss_dssp ECCTT-SHHHHHTTTCSEEEEEEEECCEECGGGHHHHHHTTCEEEEESCTTCCTTCCEEEEECTTSSSEEEESS
T ss_pred EecCC-cHHHHHhCCCceEEeecccccccCHHHHHhhccCCcEEEEEcCCcCCCCCeEEEEEcCCCCeEEEEeC
Confidence 86 46 77888986456788999999999999988774568999999998 447999999999976 9998
No 8
>1a9x_B Carbamoyl phosphate synthetase (small chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: c.8.3.1 c.23.16.1 PDB: 1bxr_B* 1ce8_B* 1jdb_C* 1cs0_B* 1m6v_B* 1c30_B* 1c3o_B* 1kee_B* 1t36_B*
Probab=100.00 E-value=1.8e-36 Score=317.59 Aligned_cols=270 Identities=20% Similarity=0.240 Sum_probs=198.9
Q ss_pred EEeeeeeeecCCCccccCCchhhHHHhhcCCCcccEEEEecCCCCCcchhccccccCCCCCCCeeecCCCCccchhhHHH
Q 009814 178 IHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQNIITLYDVPNIWHIPLLL 257 (524)
Q Consensus 178 ih~~~vp~~~~~~e~ktkptq~sv~~lrs~Gi~pd~lv~R~~~~l~~~~r~KisLf~~v~~~~Vi~i~dvdtiy~vpl~L 257 (524)
|-+.--|.++..|=-+ .+.||.+|++.++|||+.++.+||||++.||..||++++|++|.+|||| +|+++|
T Consensus 51 i~~~t~P~iGn~Gv~~--------~d~es~~~~~~g~vv~~~~~~~s~~~~~~~l~~~l~~~~i~gi~giDTR-~lt~~i 121 (379)
T 1a9x_B 51 IVTLTYPHIGNVGTND--------ADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTR-KLTRLL 121 (379)
T ss_dssp EEEECSSBCCTTCCCG--------GGCSSSSCCBSEEECSBCCSCCCCTTCCSCHHHHHHHTTCEEEESSCHH-HHHHHH
T ss_pred eeEEcCCCccEEccCc--------hhhccccceEEEEEEccCCCCCCcccccCCHHHHHHHCCCccccCCCHH-HHHHHH
Confidence 3333456676555422 3689999999999999999999999999999999999999999999999 999999
Q ss_pred HHhhhHHHHHhhc-CCCCCCChhhHHHHH-----HHHHhhcCC-------CC----------------CeEEEEEeccCC
Q 009814 258 RDQKAHEAIFKVL-NLQGTTKEPLLKEWT-----SRAEICDGL-------HE----------------PVRIAMVGKYTG 308 (524)
Q Consensus 258 reqG~~~~i~~~l-~l~~~~~~~~l~~W~-----~lv~~~~~~-------~~----------------~v~IaiVGkY~~ 308 (524)
|++|+|+++|..- ..+.......+..|. ++++.+... .. ..+|+++ +|+
T Consensus 122 R~~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~vi-D~G- 199 (379)
T 1a9x_B 122 REKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPQAKKEDELPFHVVAY-DFG- 199 (379)
T ss_dssp HHHCCEEEEEEESSSCCHHHHHHHHHHCCCSTTCBCHHHHSCSSCEEECCCCCBTTTBSCCCCCGGGCCEEEEEE-ESS-
T ss_pred HhcCCeeEEEecCCCCCHHHHHHHHHhCCCccccCccceeCCCCCEEeCCCCcccccccccccccccCCCEEEEE-ECC-
Confidence 9999999988652 111000011233342 355555431 11 3689999 586
Q ss_pred CcchHHHHHHHHHHcCCceeEEeeeEEeeCCCccccccCCChhhhhHHHHh-ccCCCEEEECCCCCCCc-hhHHHHHHHH
Q 009814 309 LSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKL-LKGADGILVPGGFGNRG-VQGKILAAKY 386 (524)
Q Consensus 309 ~~day~SI~~aL~~ag~~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~-l~~~DGIllpGGfG~rg-~eg~i~air~ 386 (524)
...|+.++|+.+|+.+.+. +.+. + +.+. ..++||||||||||++. ....++.++.
T Consensus 200 ---~k~ni~r~L~~~G~~v~vv------p~~~--------~------~e~i~~~~~DGliLsGGPgdp~~~~~~~~~Ir~ 256 (379)
T 1a9x_B 200 ---AKRNILRMLVDRGCRLTIV------PAQT--------S------AEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQK 256 (379)
T ss_dssp ---CCHHHHHHHHHTTEEEEEE------ETTC--------C------HHHHHTTCCSEEEECCCSBCSTTCHHHHHHHHH
T ss_pred ---ChHHHHHHHHHCCCEEEEE------eccC--------C------HHHHhhcCCCEEEEeCCCCChHHHHHHHHHHHH
Confidence 5588999999999877654 3221 0 0122 24799999999999984 4688899999
Q ss_pred HHHcCCCEEEEhHhHHHHHHHhccccccccCCCCcccCCCCCCCeeeeCCCCCcCCCCCcccccceeeEeccCCcccccc
Q 009814 387 AREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQIKDCKSAKL 466 (524)
Q Consensus 387 are~~iP~LGICLGmQll~ie~gr~v~gl~~a~S~Ef~~~~~~pVi~l~~e~~~~~~GgtmrLg~~~v~l~~g~s~~~~i 466 (524)
+++.++|+||||||||+|+.++|+++.+++..|+ |++ +++...+. .++
T Consensus 257 ~~~~~~PILGIClG~QLLa~A~GG~v~k~~~gh~-----------------------g~n-----~pv~~~~~----g~v 304 (379)
T 1a9x_B 257 FLETDIPVFGICLGHQLLALASGAKTVKMKFGHH-----------------------GGN-----HPVKDVEK----NVV 304 (379)
T ss_dssp HTTSCCCEEEETHHHHHHHHHTTCCEEEEEEEEE-----------------------EEE-----EEEEETTT----TEE
T ss_pred HHHcCCCEEEECchHHHHHHHhCcEEEecccccc-----------------------cCc-----eeeEecCC----CcE
Confidence 9999999999999999999999999987654322 222 33331111 122
Q ss_pred cCCcceeeeeeccccccChhhHHhhhcCCeEEEEEeCCCCeEEEEEECCCcEEEEec
Q 009814 467 YGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEVWTFNYKIAVLLNY 523 (524)
Q Consensus 467 Yg~~~~I~erhrHrYeVn~~~v~~l~~~Gl~~sg~~~dg~~VE~iE~~~hp~f~vqy 523 (524)
.++ .|+|+|+|+++.+ ..++++++.+.++..+|+++++++|+|+|||
T Consensus 305 -----~it-s~~H~~aV~~~~L----p~~~~v~a~s~~Dg~ieai~~~~~pi~gVQF 351 (379)
T 1a9x_B 305 -----MIT-AQNHGFAVDEATL----PANLRVTHKSLFDGTLQGIHRTDKPAFSFQG 351 (379)
T ss_dssp -----EEE-EEEEEEEECSTTC----CTTEEEEEEETTTCCEEEEEESSSSEEEESS
T ss_pred -----EEE-ecCccceEecccC----CCCeEEEEEeCCCCcEEEEEECCCCEEEEEe
Confidence 244 4889999987533 3479999999655569999999999999998
No 9
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=99.83 E-value=8e-20 Score=181.30 Aligned_cols=183 Identities=17% Similarity=0.204 Sum_probs=125.0
Q ss_pred CeEEEEEeccCCC----------cchHHHHHHHHHHcCCceeEEeeeEEeeCCCccccccCCChhhhhHHHHhccCCCEE
Q 009814 297 PVRIAMVGKYTGL----------SDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGI 366 (524)
Q Consensus 297 ~v~IaiVGkY~~~----------~day~SI~~aL~~ag~~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~l~~~DGI 366 (524)
++.|+|...+... .-.+.+.+++|+.+|+.+.+. +...-. +..+.+.++|||
T Consensus 4 ~p~IGi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~pv~l------p~~~~~------------~~~~~l~~~DGl 65 (254)
T 3fij_A 4 KPVIGITGNRLVKGVDVFYGHRVTYTQQRYVDAIQKVGGFPIAL------PIDDPS------------TAVQAISLVDGL 65 (254)
T ss_dssp CCEEEEEC------------------CHHHHHHHHHHTCEEEEE------CCCCGG------------GHHHHHHTCSEE
T ss_pred CCEEEEeCCcccccccccCCcchhhhhHHHHHHHHHCCCEEEEE------eCCCch------------HHHHHHhhCCEE
Confidence 4678998753211 012356789999999876653 321100 012457789999
Q ss_pred EECCCCC-CCc-----------------hhHHHHHHHHHHHcCCCEEEEhHhHHHHHHHhccccccccCCCCcccCCCCC
Q 009814 367 LVPGGFG-NRG-----------------VQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTK 428 (524)
Q Consensus 367 llpGGfG-~rg-----------------~eg~i~air~are~~iP~LGICLGmQll~ie~gr~v~gl~~a~S~Ef~~~~~ 428 (524)
|||||++ +|. ...+++++++|+++++|+||||+|||+|++++|+++.+ +..+. .
T Consensus 66 il~GG~~v~P~~yg~~~~~~~~~~~~~rd~~~~~lir~a~~~~~PiLGIC~G~Qll~~a~Gg~v~~--~~~~~-~----- 137 (254)
T 3fij_A 66 LLTGGQDITPQLYLEEPSQEIGAYFPPRDSYEIALVRAALDAGKPIFAICRGMQLVNVALGGTLYQ--DISQV-E----- 137 (254)
T ss_dssp EECCCSCCCGGGGTCCCCTTCCCCCHHHHHHHHHHHHHHHHTTCCEEEETHHHHHHHHHTTCCEES--SGGGS-S-----
T ss_pred EECCCCCCChhhcCCccCcccCCcChhhhHHHHHHHHHHHHcCCCEEEECHHHHHHHHHhCCceec--ccccc-c-----
Confidence 9999976 221 13478999999999999999999999999999999854 22221 0
Q ss_pred CCeeeeCCCCCcCCCC-CcccccceeeEeccCCcccccccCCcceeeeeeccccccChhhHHhhhcCCeEEEEEeCCCCe
Q 009814 429 NPCVIFMPEGSKTHMG-GTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQR 507 (524)
Q Consensus 429 ~pVi~l~~e~~~~~~G-gtmrLg~~~v~l~~g~s~~~~iYg~~~~I~erhrHrYeVn~~~v~~l~~~Gl~~sg~~~dg~~ 507 (524)
.+.+ .|+. ..+++|.+++.+.++ +.+.+.|+....+++ .|++.|+ .+ ..|+++++.++|+.
T Consensus 138 ~~~~--------~h~~~~~~~~g~~~v~~~~~-s~l~~~~~~~~~v~~--~H~~~v~-----~l-~~g~~v~a~s~dg~- 199 (254)
T 3fij_A 138 TKAL--------QHLQRVDEQLGSHTIDIEPT-SELAKHHPNKKLVNS--LHHQFIK-----KL-APSFKVTARTADGM- 199 (254)
T ss_dssp SCCC--------CCBCCSCTTSCCEEEEECTT-SSGGGTCCTTEEECC--BCSCEES-----SC-CSSEEEEEEETTCC-
T ss_pred Cccc--------cccCCCCCccceEEEEeCCC-ChHHHhcCCcEEEEE--eccchhh-----cc-CCCcEEEEEeCCCc-
Confidence 1111 1111 235678889999888 888888864334554 3666664 23 56899999999885
Q ss_pred EEEEEEC-CCc-EEEEec
Q 009814 508 MEVWTFN-YKI-AVLLNY 523 (524)
Q Consensus 508 VE~iE~~-~hp-~f~vqy 523 (524)
+|++|++ ++| ++.|||
T Consensus 200 ieai~~~~~~~~~~gvQf 217 (254)
T 3fij_A 200 IEAVEGDNLPSWYLGVQW 217 (254)
T ss_dssp EEEEEESSCSSCEEEESS
T ss_pred EEEEEecCCCCeEEEEEc
Confidence 9999999 999 999998
No 10
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=99.78 E-value=2.9e-19 Score=171.15 Aligned_cols=176 Identities=14% Similarity=0.119 Sum_probs=109.2
Q ss_pred EEEEEeccCCCcchHHHHHHHHHHcCCceeEEeeeEEeeCCCccccccCCChhhhhHHHHhccCCCEEEECCCCCCCchh
Q 009814 299 RIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQ 378 (524)
Q Consensus 299 ~IaiVGkY~~~~day~SI~~aL~~ag~~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~l~~~DGIllpGGfG~rg~e 378 (524)
+|+|+ ||+ .+ +..||.+||+++|+++.+. .+| +.+.++||||+|| +|+++..
T Consensus 4 ~I~ii-D~g-~~-n~~si~~al~~~G~~~~v~-----------------~~~-------~~l~~~D~lilPG-~g~~~~~ 55 (211)
T 4gud_A 4 NVVII-DTG-CA-NISSVKFAIERLGYAVTIS-----------------RDP-------QVVLAADKLFLPG-VGTASEA 55 (211)
T ss_dssp CEEEE-CCC-CT-THHHHHHHHHHTTCCEEEE-----------------CCH-------HHHHHCSEEEECC-CSCHHHH
T ss_pred EEEEE-ECC-CC-hHHHHHHHHHHCCCEEEEE-----------------CCH-------HHHhCCCEEEECC-CCCHHHH
Confidence 69999 698 33 6789999999999987753 112 4677899999996 4554221
Q ss_pred ----HHHHHHHHHHHcCCCEEEEhHhHHHHHHHhccccccccCCCCcccCCCCCCCeeeeCCC-CCcCCCCCccccccee
Q 009814 379 ----GKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE-GSKTHMGGTMRLGSRR 453 (524)
Q Consensus 379 ----g~i~air~are~~iP~LGICLGmQll~ie~gr~v~gl~~a~S~Ef~~~~~~pVi~l~~e-~~~~~~GgtmrLg~~~ 453 (524)
.....++.+++.++|+||||+|||+|+.++++++......... -...+.+|..+... ....+++++ .
T Consensus 56 ~~~~~~~~~i~~~~~~~~PvlGIClG~QlL~~~~g~~~~~~~~~~~g--l~~~~~~v~~~~~~~~~~~~~~~~------~ 127 (211)
T 4gud_A 56 MKNLTERDLIELVKRVEKPLLGICLGMQLLGKLSEEKGQKADEIVQC--LGLVDGEVRLLQTGDLPLPHMGWN------T 127 (211)
T ss_dssp HHHHHHTTCHHHHHHCCSCEEEETHHHHTTSSEECCC----CCCEEC--CCSSSCEEEECCCTTSCSSEEEEE------C
T ss_pred HHHHHhcChHHHHHHcCCCEEEEchhHhHHHHHhCCcccccCCcccc--ceeccceEEEcccCCcceeeccce------e
Confidence 1223467788899999999999999999999988654332221 11234455554322 223444433 2
Q ss_pred eEeccCCcccccccCCcceeeeeeccccccChhhHHhhhcCCeEEEEEeCCCCeEEEEEECCCcEEEEec
Q 009814 454 TYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEVWTFNYKIAVLLNY 523 (524)
Q Consensus 454 v~l~~g~s~~~~iYg~~~~I~erhrHrYeVn~~~v~~l~~~Gl~~sg~~~dg~~VE~iE~~~hp~f~vqy 523 (524)
+.....+++...+. ....+ .+.|+|.+.+ +..+.+.+.+|. .+++.+.+.|++.|||
T Consensus 128 ~~~~~~~~l~~~l~-~~~~~--~~~H~~~v~~---------~~~~~a~~~~g~-~~~~~v~~~~v~GvQF 184 (211)
T 4gud_A 128 VQVKEGHPLFNGIE-PDAYF--YFVHSFAMPV---------GDYTIAQCEYGQ-PFSAAIQAGNYYGVQF 184 (211)
T ss_dssp CEECTTCGGGTTCC-TTCCE--EEEESEECCC---------CTTEEEEEESSS-EEEEEEEETTEEEESS
T ss_pred eeeeccChhhcCCC-CCcEE--EEEeeEEeCC---------CCeEEEEecCCC-eEEEEEeCCCEEEEEc
Confidence 22223312222222 12223 4678888753 334567777776 6777777889999998
No 11
>1qdl_B Protein (anthranilate synthase (TRPG-SUBUNIT)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: c.23.16.1
Probab=99.77 E-value=3.5e-18 Score=162.62 Aligned_cols=162 Identities=15% Similarity=0.191 Sum_probs=109.6
Q ss_pred EEEEeccCCCcchHHHHHHHHHHcCCceeEEeeeEEeeCCCccccccCCChhhhhHHHHhcc--CCCEEEECCCCCCCch
Q 009814 300 IAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLK--GADGILVPGGFGNRGV 377 (524)
Q Consensus 300 IaiVGkY~~~~day~SI~~aL~~ag~~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~l~--~~DGIllpGGfG~rg~ 377 (524)
|++++.+.+. ..++.++|+.+|+.+.+. +.++.. ++.+. ++|||++|||+|.+..
T Consensus 4 i~iid~~~s~---~~~~~~~l~~~G~~~~v~------~~~~~~--------------~~~~~~~~~dglil~gG~~~~~~ 60 (195)
T 1qdl_B 4 TLIIDNYDSF---VYNIAQIVGELGSYPIVI------RNDEIS--------------IKGIERIDPDRLIISPGPGTPEK 60 (195)
T ss_dssp EEEEECSCSS---HHHHHHHHHHTTCEEEEE------ETTTSC--------------HHHHHHHCCSEEEECCCSSCTTS
T ss_pred EEEEECCCch---HHHHHHHHHhCCCEEEEE------eCCCCC--------------HHHHhhCCCCEEEECCCCCChhh
Confidence 8999755533 247789999999876553 222110 12232 6999999999998743
Q ss_pred ---hH-HHHHHHHHHHcCCCEEEEhHhHHHHHHHhccccccccCCCCcccCCCCCCCeeeeCCCCCcCCCCCccccccee
Q 009814 378 ---QG-KILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRR 453 (524)
Q Consensus 378 ---eg-~i~air~are~~iP~LGICLGmQll~ie~gr~v~gl~~a~S~Ef~~~~~~pVi~l~~e~~~~~~GgtmrLg~~~ 453 (524)
.+ ..+.++++ +.++|+||||+|||+|+.++|+++...+.. .| |+ .++
T Consensus 61 ~~~~~~~~~~i~~~-~~~~PvLGIC~G~QlL~~~~gg~v~~~~~~----------------------~~-g~-----~~~ 111 (195)
T 1qdl_B 61 REDIGVSLDVIKYL-GKRTPILGVCLGHQAIGYAFGAKIRRARKV----------------------FH-GK-----ISN 111 (195)
T ss_dssp HHHHTTHHHHHHHH-TTTSCEEEETHHHHHHHHHTTCEEEEEEEE----------------------EE-EE-----EEE
T ss_pred hhhhhHHHHHHHHh-cCCCcEEEEehHHHHHHHHhCCEEeccCCC----------------------cC-CC-----ceE
Confidence 22 34777775 779999999999999999999998653310 11 11 122
Q ss_pred eEeccCCc--ccccccCCcceeeeeeccccccChhhHHhhhcCCeEEEEEe-CCCCeEEEEEECCCcEEEEec
Q 009814 454 TYFQIKDC--KSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKD-ETSQRMEVWTFNYKIAVLLNY 523 (524)
Q Consensus 454 v~l~~g~s--~~~~iYg~~~~I~erhrHrYeVn~~~v~~l~~~Gl~~sg~~-~dg~~VE~iE~~~hp~f~vqy 523 (524)
+.+.++ + .+.+.+. ..+.-.+.|+|.|. .+ ..|+++++.+ .++ .+|+++.+++|++.|||
T Consensus 112 v~~~~~-~~~~l~~~~~--~~~~v~~~H~~~v~-----~l-~~~~~vla~s~~~g-~i~a~~~~~~~~~gvQf 174 (195)
T 1qdl_B 112 IILVNN-SPLSLYYGIA--KEFKATRYHSLVVD-----EV-HRPLIVDAISAEDN-EIMAIHHEEYPIYGVQF 174 (195)
T ss_dssp EEECCS-SCCSTTTTCC--SEEEEEEEEEEEEE-----CC-CTTEEEEEEESSSC-CEEEEEESSSSEEEESS
T ss_pred EEECCC-CHhHHHhcCC--CceEEeccccchhh-----hC-CCCcEEEEEECCCC-cEEEEEeCCCCEEEEec
Confidence 333334 3 3434342 23444688999885 22 4589999999 677 59999999999999998
No 12
>2a9v_A GMP synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, ligase; 2.24A {Thermoplasma acidophilum} SCOP: c.23.16.1
Probab=99.76 E-value=2.6e-18 Score=166.05 Aligned_cols=165 Identities=19% Similarity=0.256 Sum_probs=115.1
Q ss_pred CCeEEEEEeccCCCcchHHHHHHHHHHcCCceeEEeeeEEeeCCCccccccCCChhhhhHHHHhccCCCEEEECCC-CCC
Q 009814 296 EPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGG-FGN 374 (524)
Q Consensus 296 ~~v~IaiVGkY~~~~day~SI~~aL~~ag~~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~l~~~DGIllpGG-fG~ 374 (524)
..++|.+++.|.+.. .++.++|+.+|+.+.+. +.+. ++ +.+.++|||||||| |++
T Consensus 12 ~~~~i~~id~~~~~~---~~~~~~l~~~G~~~~vv------~~~~--------~~-------~~l~~~DglIl~GG~p~~ 67 (212)
T 2a9v_A 12 HMLKIYVVDNGGQWT---HREWRVLRELGVDTKIV------PNDI--------DS-------SELDGLDGLVLSGGAPNI 67 (212)
T ss_dssp CCCBEEEEEESCCTT---CHHHHHHHHTTCBCCEE------ETTS--------CG-------GGGTTCSEEEEEEECSCG
T ss_pred ccceEEEEeCCCccH---HHHHHHHHHCCCEEEEE------eCCC--------CH-------HHHhCCCEEEECCCCCCC
Confidence 457899997665432 46789999999877654 3221 01 34567999999999 888
Q ss_pred Cchh-HHHHHHHHHHHcCCCEEEEhHhHHHHHHHhccccccccCCCCcccCCCCCCCeeeeCCCCCcCCCCCccccccee
Q 009814 375 RGVQ-GKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRR 453 (524)
Q Consensus 375 rg~e-g~i~air~are~~iP~LGICLGmQll~ie~gr~v~gl~~a~S~Ef~~~~~~pVi~l~~e~~~~~~GgtmrLg~~~ 453 (524)
+..+ ......++++++++|+||||+|||+|+.++|+++...+. ++. |.++
T Consensus 68 ~~~~~~~~~l~~~~~~~~~PiLGIC~G~Qll~~~lGg~v~~~~~-----------------------~~~------G~~~ 118 (212)
T 2a9v_A 68 DEELDKLGSVGKYIDDHNYPILGICVGAQFIALHFGASVVKAKH-----------------------PEF------GKTK 118 (212)
T ss_dssp GGTGGGHHHHHHHHHHCCSCEEEETHHHHHHHHHTTCEEEEEEE-----------------------EEE------EEEE
T ss_pred CcccccchhHHHHHHhCCCCEEEEChHHHHHHHHhCCEEEcCCC-----------------------ccc------Ccee
Confidence 6321 223345667789999999999999999999998854311 112 3345
Q ss_pred eEeccCCcccccccCCcceeeeeeccccccChhhHHhhhcCCeEEEEEeCCCCeEEEEEECCCcEEEEec
Q 009814 454 TYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEVWTFNYKIAVLLNY 523 (524)
Q Consensus 454 v~l~~g~s~~~~iYg~~~~I~erhrHrYeVn~~~v~~l~~~Gl~~sg~~~dg~~VE~iE~~~hp~f~vqy 523 (524)
+.+.++ +.+.+.++ . .+.-.|.|+|.|.. + ..|+++++.+.++. +|+++.+++|++.|||
T Consensus 119 v~~~~~-~~l~~~~~-~-~~~v~~~H~~~v~~-----l-~~~~~vlA~s~d~~-i~ai~~~~~~i~gvQf 178 (212)
T 2a9v_A 119 VSVMHS-ENIFGGLP-S-EITVWENHNDEIIN-----L-PDDFTLAASSATCQ-VQGFYHKTRPIYATQF 178 (212)
T ss_dssp EEESCC-CGGGTTCC-S-EEEEEEEEEEEEES-----C-CTTEEEEEECSSCS-CSEEEESSSSEEEESS
T ss_pred eEECCC-ChhHhcCC-C-ceEEEeEhhhhHhh-----C-CCCcEEEEEeCCCC-EEEEEECCCCEEEEEe
Confidence 555555 44444443 2 23336889998742 2 35899999998865 9999999999999998
No 13
>1l9x_A Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCOP: c.23.16.1
Probab=99.73 E-value=9.3e-18 Score=171.82 Aligned_cols=182 Identities=14% Similarity=0.096 Sum_probs=110.2
Q ss_pred CeEEEEEeccCCCc--------chHHHHHHHHHHcCCceeEEeeeEEeeCCCccccccCCChhhhhHHHHhccCCCEEEE
Q 009814 297 PVRIAMVGKYTGLS--------DAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILV 368 (524)
Q Consensus 297 ~v~IaiVGkY~~~~--------day~SI~~aL~~ag~~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~l~~~DGIll 368 (524)
++.|+|........ -...++.++|+.+|+.+.+. +.+.+ + .+..+.+.++|||||
T Consensus 30 ~P~IGI~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~vv----~~~~~----------~---~~i~~~l~~~dglil 92 (315)
T 1l9x_A 30 KPIIGILMQKCRNKVMKNYGRYYIAASYVKYLESAGARVVPV----RLDLT----------E---KDYEILFKSINGILF 92 (315)
T ss_dssp CCEEEEECEECCSHHHHTTCSEEEEHHHHHHHHHTTCEEEEE----CSSCC----------H---HHHHHHHHHSSEEEE
T ss_pred CCEEEEECCcccccccccCcceehHHHHHHHHHHCCCEEEEE----ecCCC----------H---HHHHHHHhcCCEEEE
Confidence 57899997543211 01246789999999876654 22111 1 011233568999999
Q ss_pred CCCCCCC--c-h-hHHHHHHHHHHHc-----CCCEEEEhHhHHHHHHHhccccccccCCCCcccCCCCCCCeeeeCCCCC
Q 009814 369 PGGFGNR--G-V-QGKILAAKYAREH-----RIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGS 439 (524)
Q Consensus 369 pGGfG~r--g-~-eg~i~air~are~-----~iP~LGICLGmQll~ie~gr~v~gl~~a~S~Ef~~~~~~pVi~l~~e~~ 439 (524)
|||+++. . . +-...+++.+++. ++|+||||+|||+|++++|+++..... .+.+ .+.|+...
T Consensus 93 ~GG~~~v~p~~~~~~~~~l~~~~~~~~~~g~~~PiLGIC~G~Qll~~a~GG~~~~~~~---~~~g--~~~p~~~~----- 162 (315)
T 1l9x_A 93 PGGSVDLRRSDYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGFEELSLLISGECLLTAT---DTVD--VAMPLNFT----- 162 (315)
T ss_dssp CCCCCCTTTCHHHHHHHHHHHHHHHHHHTTCCCCEEEETHHHHHHHHHHHSSCCCEEE---EEEE--EEECCEEC-----
T ss_pred eCCCcccChhhhhHHHHHHHHHHHHHHhcCCCceEEEEChHHHHHHHHhCCccccccc---cccC--CCCCeeec-----
Confidence 9999874 2 1 1112344555554 699999999999999999998642111 0110 01122110
Q ss_pred cCCCCCcccccceeeEeccCCcccccccCC-------cceeeeeeccccccChhhHHh--hhcCCeEEEEEeCCCCeEEE
Q 009814 440 KTHMGGTMRLGSRRTYFQIKDCKSAKLYGN-------RTFIDERHRHRYEVNPDMIAR--LENAGLSFTGKDETSQRMEV 510 (524)
Q Consensus 440 ~~~~GgtmrLg~~~v~l~~g~s~~~~iYg~-------~~~I~erhrHrYeVn~~~v~~--l~~~Gl~~sg~~~dg~~VE~ 510 (524)
...++ +.+.+.+.. +..+.. ++|+|+|++++++. ....|++++|+++|+. +|+
T Consensus 163 ---------------~~~~~-s~L~~~~~~~~~~~l~~~~~~~-~~H~~~V~~~~~~~~~~l~~g~~v~A~s~dg~-ve~ 224 (315)
T 1l9x_A 163 ---------------GGQLH-SRMFQNFPTELLLSLAVEPLTA-NFHKWSLSVKNFTMNEKLKKFFNVLTTNTDGK-IEF 224 (315)
T ss_dssp ---------------STTTT-CSTTTTSCHHHHHHHHHSCCEE-EEEEEECBHHHHHTCHHHHHHEEEEEEEESSS-CEE
T ss_pred ---------------cCCCC-ChHHHhcChhhhhhccccceEE-EhhhhhcCccccccccccCCCCEEEEEcCCCC-EEE
Confidence 00123 344444421 123444 48999999877654 1245899999999865 776
Q ss_pred E---EECCCcEEEEec
Q 009814 511 W---TFNYKIAVLLNY 523 (524)
Q Consensus 511 i---E~~~hp~f~vqy 523 (524)
+ ++++.|++.|||
T Consensus 225 i~~i~~~~~~i~GVQf 240 (315)
T 1l9x_A 225 ISTMEGYKYPVYGVQW 240 (315)
T ss_dssp EEEEEESSSCEEEESS
T ss_pred EEEeccCCCCEEEEEe
Confidence 6 667789999998
No 14
>2vpi_A GMP synthase; guanine monophosphate synthetase, phosphoprotein, GMP synthetase, GMP biosynthesis, glutamine amidotransferase, ligase, cytoplasm; 2.40A {Homo sapiens}
Probab=99.73 E-value=8.3e-18 Score=163.53 Aligned_cols=162 Identities=14% Similarity=0.085 Sum_probs=104.9
Q ss_pred eEEEEEeccCCCcchHHHHHHHHHHcCCceeEEeeeEEeeCCCccccccCCChhhhhHHHHhc--cCCCEEEECCCCCCC
Q 009814 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGFGNR 375 (524)
Q Consensus 298 v~IaiVGkY~~~~day~SI~~aL~~ag~~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~l--~~~DGIllpGGfG~r 375 (524)
.+|+++ +|+.- .-.++.++|+.+|+.+.+. +++.+ + +.+ .++|||+||||++.+
T Consensus 25 ~~I~ii-D~g~~--~~~~i~~~l~~~G~~~~vv----~~~~~----------~-------~~l~~~~~dglil~Gg~~~~ 80 (218)
T 2vpi_A 25 GAVVIL-DAGAQ--YGKVIDRRVRELFVQSEIF----PLETP----------A-------FAIKEQGFRAIIISGGPNSV 80 (218)
T ss_dssp TCEEEE-ECSTT--TTHHHHHHHHHTTCCEEEE----CTTCC----------H-------HHHHHHTCSEEEEEC-----
T ss_pred CeEEEE-ECCCc--hHHHHHHHHHHCCCEEEEE----ECCCC----------h-------HHHhhcCCCEEEECCCCccc
Confidence 479999 46521 2358899999999876654 22111 0 122 569999999999875
Q ss_pred chhHHHHHHHHHHHcCCCEEEEhHhHHHHHHHhccccccccCCCCcccCCCCCCCeeeeCCCCCcCCCCCcccccceeeE
Q 009814 376 GVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTY 455 (524)
Q Consensus 376 g~eg~i~air~are~~iP~LGICLGmQll~ie~gr~v~gl~~a~S~Ef~~~~~~pVi~l~~e~~~~~~GgtmrLg~~~v~ 455 (524)
..+......+.+++.++|+||||+|||+|+.++|+++...+. .+. |.+++.
T Consensus 81 ~~~~~~~~~~~~~~~~~PilGIC~G~Qll~~~~GG~v~~~~~-----------------------~~~------G~~~v~ 131 (218)
T 2vpi_A 81 YAEDAPWFDPAIFTIGKPVLGICYGMQMMNKVFGGTVHKKSV-----------------------RED------GVFNIS 131 (218)
T ss_dssp ----CCCCCGGGGTSSCCEEEETHHHHHHHHHTTCCEEEEEE-----------------------CSC------EEEEEE
T ss_pred ccccchhHHHHHHHcCCCEEEEcHHHHHHHHHhCCceEeCCC-----------------------Ccc------cEEEEE
Confidence 211111123445678999999999999999999998865321 112 234555
Q ss_pred eccCCcccccccCCcceeeeeeccccccChhhHHhhhcCCeEEEEEeCCCCeEEEEEECCCcEEEEec
Q 009814 456 FQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEVWTFNYKIAVLLNY 523 (524)
Q Consensus 456 l~~g~s~~~~iYg~~~~I~erhrHrYeVn~~~v~~l~~~Gl~~sg~~~dg~~VE~iE~~~hp~f~vqy 523 (524)
+.++ +.+.+.++....+ .+.|+|.|+. + ..|+++++.+ ++ .+|++++++.|++.|||
T Consensus 132 ~~~~-~~l~~~l~~~~~v--~~~H~~~v~~-----l-~~~~~vlA~s-~~-~i~ai~~~~~~i~gvQf 188 (218)
T 2vpi_A 132 VDNT-CSLFRGLQKEEVV--LLTHGDSVDK-----V-ADGFKVVARS-GN-IVAGIANESKKLYGAQF 188 (218)
T ss_dssp ECTT-SGGGTTCCSEEEE--EECSEEEESS-----C-CTTCEEEEEE-TT-EEEEEEETTTTEEEESS
T ss_pred EccC-ChhHhcCCCCcEE--eehhhhHhhh-----c-CCCCEEEEEc-CC-eEEEEEECCCCEEEEEc
Confidence 5555 5555555322233 4779999852 2 3589999998 55 79999999999999998
No 15
>1wl8_A GMP synthase [glutamine-hydrolyzing] subunit A; transferase, gatases, riken structural genomics/proteomics initiative, RSGI; 1.45A {Pyrococcus horikoshii} SCOP: c.23.16.1 PDB: 2d7j_A
Probab=99.72 E-value=5e-17 Score=153.38 Aligned_cols=161 Identities=19% Similarity=0.186 Sum_probs=107.2
Q ss_pred EEEEEeccCCCcchHHHHHHHHHHcCCceeEEeeeEEeeCCCccccccCCChhhhhHHHHhc--cCCCEEEECCCCCCCc
Q 009814 299 RIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGFGNRG 376 (524)
Q Consensus 299 ~IaiVGkY~~~~day~SI~~aL~~ag~~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~l--~~~DGIllpGGfG~rg 376 (524)
+|++++ |.. +...++.++|+.+|+.+.+. +.+. .+ +.+ .++|||++|||+ ++.
T Consensus 2 mi~iid-~~~--~~~~~~~~~l~~~G~~~~~~------~~~~--------~~-------~~~~~~~~dglil~Gg~-~~~ 56 (189)
T 1wl8_A 2 MIVIMD-NGG--QYVHRIWRTLRYLGVETKII------PNTT--------PL-------EEIKAMNPKGIIFSGGP-SLE 56 (189)
T ss_dssp EEEEEE-CSC--TTHHHHHHHHHHTTCEEEEE------ETTC--------CH-------HHHHHTCCSEEEECCCS-CTT
T ss_pred eEEEEE-CCC--chHHHHHHHHHHCCCeEEEE------ECCC--------Ch-------HHhcccCCCEEEECCCC-Chh
Confidence 489995 542 13568899999999876653 2221 01 222 369999999998 663
Q ss_pred hhH-HHHHHHHHHHcCCCEEEEhHhHHHHHHHhccccccccCCCCcccCCCCCCCeeeeCCCCCcCCCCCcccccceeeE
Q 009814 377 VQG-KILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTY 455 (524)
Q Consensus 377 ~eg-~i~air~are~~iP~LGICLGmQll~ie~gr~v~gl~~a~S~Ef~~~~~~pVi~l~~e~~~~~~GgtmrLg~~~v~ 455 (524)
..+ ..+.++.+.+.++|+||||+|||+|+.++|+++.+++.. +.|++ ++.
T Consensus 57 ~~~~~~~~i~~~~~~~~PilGIC~G~Q~l~~~~gg~v~~~~~~-----------------------~~G~~------~~~ 107 (189)
T 1wl8_A 57 NTGNCEKVLEHYDEFNVPILGICLGHQLIAKFFGGKVGRGEKA-----------------------EYSLV------EIE 107 (189)
T ss_dssp CCTTHHHHHHTGGGTCSCEEEETHHHHHHHHHHTCEEEECSCC-----------------------SCEEE------EEE
T ss_pred hhhhHHHHHHHHhhCCCeEEEEcHHHHHHHHHhCCceecCCCc-----------------------ccCce------eEE
Confidence 233 467777776889999999999999999999998654211 12221 222
Q ss_pred eccCCcccccccCCcceeeeeeccccccChhhHHhhhcCCeEEEEEeCCCCeEEEEEECCCcEEEEec
Q 009814 456 FQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEVWTFNYKIAVLLNY 523 (524)
Q Consensus 456 l~~g~s~~~~iYg~~~~I~erhrHrYeVn~~~v~~l~~~Gl~~sg~~~dg~~VE~iE~~~hp~f~vqy 523 (524)
+... +.+.+.++ ..+.-.|.|.+.++ .+ ..++++.+.++++. +|+++++++|++.|||
T Consensus 108 ~~~~-~~l~~~~~--~~~~~~~~h~~~v~-----~l-~~~~~vla~s~~g~-i~a~~~~~~~~~gvQf 165 (189)
T 1wl8_A 108 IIDE-XEIFKGLP--KRLKVWESHMDEVK-----EL-PPKFKILARSETCP-IEAMKHEELPIYGVQF 165 (189)
T ss_dssp ESCC---CCTTSC--SEEEEEECCSEEEE-----EC-CTTEEEEEEESSCS-CSEEEESSSCEEEESS
T ss_pred EecC-chHHhCCC--CceEEEEEeeeehh-----hC-CCCcEEEEEcCCCC-EEEEEeCCceEEEEec
Confidence 2222 22222222 22333577777653 22 45899999999885 9999999999999998
No 16
>1o1y_A Conserved hypothetical protein TM1158; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 1.70A {Thermotoga maritima} SCOP: c.23.16.1
Probab=99.70 E-value=1.5e-16 Score=156.46 Aligned_cols=167 Identities=16% Similarity=0.172 Sum_probs=114.3
Q ss_pred CCCeEEEEEeccCCCcchHHHHHHHHHHcCCceeEEeeeEEeeC-CCccccccCCChhhhhHHHHhccCCCEEEECCCCC
Q 009814 295 HEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPA-CDLEDATEKENPDAYKAAWKLLKGADGILVPGGFG 373 (524)
Q Consensus 295 ~~~v~IaiVGkY~~~~day~SI~~aL~~ag~~~~v~v~i~~i~s-~~le~~~~~~~p~~y~~~~~~l~~~DGIllpGGfG 373 (524)
...++|.++-.+ ... +-.++.++|+..|+++.+. ..+. +.+ | +.+.++||||+|||++
T Consensus 10 ~~~~~~~~i~~~-~~~-~~~~i~~~l~~~G~~v~v~----~~~~~~~~--------~-------~~l~~~Dglil~GG~~ 68 (239)
T 1o1y_A 10 HHHVRVLAIRHV-EIE-DLGMMEDIFREKNWSFDYL----DTPKGEKL--------E-------RPLEEYSLVVLLGGYM 68 (239)
T ss_dssp CCCCEEEEECSS-TTS-SCTHHHHHHHHTTCEEEEE----CGGGTCCC--------S-------SCGGGCSEEEECCCSC
T ss_pred cceeEEEEEECC-CCC-CchHHHHHHHhCCCcEEEe----CCcCcccc--------c-------cchhcCCEEEECCCCc
Confidence 356889888543 233 4557888899999876543 1111 111 1 3467899999999997
Q ss_pred CC-c------hhHHHHHHHHHHHcCCCEEEEhHhHHHHHHHhccccccccCCCCcccCCCCCCCeeeeCCCCCcCCCCCc
Q 009814 374 NR-G------VQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGT 446 (524)
Q Consensus 374 ~r-g------~eg~i~air~are~~iP~LGICLGmQll~ie~gr~v~gl~~a~S~Ef~~~~~~pVi~l~~e~~~~~~Ggt 446 (524)
.+ + +....+.++++.++++|+||||+|||+|+.++|+++...+.. ++
T Consensus 69 ~~~~~~~~~~l~~~~~~i~~~~~~~~PiLGIC~G~QlL~~alGG~v~~~~~g----------------------~~---- 122 (239)
T 1o1y_A 69 GAYEEEKYPFLKYEFQLIEEILKKEIPFLGICLGSQMLAKVLGASVYRGKNG----------------------EE---- 122 (239)
T ss_dssp CTTCTTTCTHHHHHHHHHHHHHHHTCCEEEETHHHHHHHHHTTCCEEECTTC----------------------CE----
T ss_pred cccCCccChhHHHHHHHHHHHHHCCCCEEEEchhHHHHHHHcCCeEecCCCC----------------------Cc----
Confidence 64 2 246788999999999999999999999999999988543210 01
Q ss_pred ccccceeeEeccCCcccccccCCcceeeeeeccccccChhhHHhhhcCCeEEEEEeCCCCeEEEEEECCCcEEEEec
Q 009814 447 MRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEVWTFNYKIAVLLNY 523 (524)
Q Consensus 447 mrLg~~~v~l~~g~s~~~~iYg~~~~I~erhrHrYeVn~~~v~~l~~~Gl~~sg~~~dg~~VE~iE~~~hp~f~vqy 523 (524)
.|.+++...++ +.+.+.++ ..+...|.|+|.+. + ..|+++.+.+.++. +|+++..+ ++.|||
T Consensus 123 --~G~~~v~~~~~-~~l~~~~~--~~~~~~~~H~~~v~------l-p~~~~vlA~s~~~~-iea~~~~~--i~gvQf 184 (239)
T 1o1y_A 123 --IGWYFVEKVSD-NKFFREFP--DRLRVFQWHGDTFD------L-PRRATRVFTSEKYE-NQGFVYGK--AVGLQF 184 (239)
T ss_dssp --EEEEEEEECCC-CGGGTTSC--SEEEEEEEESEEEC------C-CTTCEEEEECSSCS-CSEEEETT--EEEESS
T ss_pred --cccEEEEECCC-CchHHhCC--CCceeEeecCCccc------c-CCCCEEEEEcCCCC-EEEEEECC--EEEEEe
Confidence 12334444344 44444442 23444688999872 2 45899999988775 99999986 999998
No 17
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum}
Probab=99.68 E-value=1e-16 Score=175.63 Aligned_cols=185 Identities=18% Similarity=0.222 Sum_probs=119.0
Q ss_pred eEEEEEeccCCCcchHHHHHHHHHHcCCceeEEeeeEEeeCCCccccccCCChhhhhHHHHhc--cCCCEEEECCCCCCC
Q 009814 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGFGNR 375 (524)
Q Consensus 298 v~IaiVGkY~~~~day~SI~~aL~~ag~~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~l--~~~DGIllpGGfG~r 375 (524)
.+|+++ ||+.. .-.+|.++|+.+|+.+.+. +.+. ++ +.+ .++|||||||||+++
T Consensus 8 ~~Ilil-D~Gs~--~~~~I~r~lre~Gv~~eiv----~~~~-~~----------------~~i~~~~~dgIIlsGGp~s~ 63 (556)
T 3uow_A 8 DKILVL-NFGSQ--YFHLIVKRLNNIKIFSETK----DYGV-EL----------------KDIKDMNIKGVILSGGPYSV 63 (556)
T ss_dssp CEEEEE-ESSCT--THHHHHHHHHHTTCCEEEE----ETTC-CG----------------GGTTTSCEEEEEECCCSCCT
T ss_pred CEEEEE-ECCCc--cHHHHHHHHHHCCCeEEEE----ECCC-CH----------------HHHhhcCCCEEEECCCCCcc
Confidence 479999 58731 3358999999999887664 2111 11 222 378999999999986
Q ss_pred chhH----HHHHHHHHHHcCCCEEEEhHhHHHHHHHhccccccccCCCCcccC-------CC---CCCCeeeeCCCCCcC
Q 009814 376 GVQG----KILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFD-------PN---TKNPCVIFMPEGSKT 441 (524)
Q Consensus 376 g~eg----~i~air~are~~iP~LGICLGmQll~ie~gr~v~gl~~a~S~Ef~-------~~---~~~pVi~l~~e~~~~ 441 (524)
..++ ....++.+.+.++|+||||+|||+|+.++|+++.... +.|++ +. .++|++..+++.. +
T Consensus 64 ~~~~~~~~~~~l~~~a~~~g~PvLGIC~G~QlLa~~lGG~V~~~~---~~E~G~~~l~~~~~~~~~~~p~v~~~~~~~-~ 139 (556)
T 3uow_A 64 TEAGSPHLKKEVFEYFLEKKIPIFGICYGMQEIAVQMNGEVKKSK---TSEYGCTDVNILRNDNINNITYCRNFGDSS-S 139 (556)
T ss_dssp TSTTCCCCCHHHHHHHHHTTCCEEEETHHHHHHHHHTTCEEEEEE---EEEEEEEEEEECCTTGGGGCSGGGGC---C-C
T ss_pred cccCCcchhHHHHHHhhhcCCCEEEECHHHHHHHHHhCCcEecCC---CcccCCcceeeccCcccccccceecccccc-c
Confidence 3322 1245566778899999999999999999999996532 23332 11 2356665554322 4
Q ss_pred CCCCcccccceeeEeccCCcccccccCCcceeeeeeccccccChhhHHhhhcCCeEEEEEeCCCCeEEEEEECCCcEEEE
Q 009814 442 HMGGTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEVWTFNYKIAVLL 521 (524)
Q Consensus 442 ~~GgtmrLg~~~v~l~~g~s~~~~iYg~~~~I~erhrHrYeVn~~~v~~l~~~Gl~~sg~~~dg~~VE~iE~~~hp~f~v 521 (524)
||||. ...+.+...++++..+|. ....-.+.|+|.|.. + ..|+++.|.++++ .++++++++++++.|
T Consensus 140 ~mg~~----~n~~~~~~~~~Lf~gl~~--~~~~v~~~H~d~V~~-----l-p~g~~vlA~s~~~-~i~ai~~~~~~i~Gv 206 (556)
T 3uow_A 140 AMDLY----SNYKLMNETCCLFENIKS--DITTVWMNHNDEVTK-----I-PENFYLVSSSENC-LICSIYNKEYNIYGV 206 (556)
T ss_dssp HHHHH----TTSCCCC--CGGGTTCCS--SEEEEEEEEEEEEEE-----C-CTTCEEEEEETTE-EEEEEEETTTTEEEE
T ss_pred ccccc----cccccccccchhhccccc--CceEEEEEccceeec-----c-CCCcEEEEEeCCC-CEEEEEECCCCEEEE
Confidence 55542 122222222133434432 223335778887742 2 4589999999887 499999999999999
Q ss_pred ec
Q 009814 522 NY 523 (524)
Q Consensus 522 qy 523 (524)
||
T Consensus 207 QF 208 (556)
T 3uow_A 207 QY 208 (556)
T ss_dssp SS
T ss_pred Ec
Confidence 98
No 18
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B*
Probab=99.66 E-value=2.1e-15 Score=142.84 Aligned_cols=165 Identities=12% Similarity=0.105 Sum_probs=97.4
Q ss_pred eEEEEEeccCCCcchHHHHHHHHHHcCCceeEEeeeEEeeCC-CccccccCCChhhhhHHHHhcc--CCCEEEECCCCCC
Q 009814 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPAC-DLEDATEKENPDAYKAAWKLLK--GADGILVPGGFGN 374 (524)
Q Consensus 298 v~IaiVGkY~~~~day~SI~~aL~~ag~~~~v~v~i~~i~s~-~le~~~~~~~p~~y~~~~~~l~--~~DGIllpGGfG~ 374 (524)
++|++++.|.+. ..++.++|+.+|+++.+. +.+ ..+ +..+.+. +.|++|++||+|+
T Consensus 1 ~~i~iiDn~~s~---~~~i~~~l~~~G~~~~v~------~~~~~~~------------~i~~~l~~~~~~~iil~gGpg~ 59 (192)
T 1i1q_B 1 ADILLLDNIDSF---TWNLADQLRTNGHNVVIY------RNHIPAQ------------TLIDRLATMKNPVLMLSPGPGV 59 (192)
T ss_dssp CEEEEEECSCSS---HHHHHHHHHHTTCEEEEE------ETTSCSH------------HHHHHHTTCSSEEEEECCCSSC
T ss_pred CcEEEEECCccH---HHHHHHHHHHCCCeEEEE------ECCCCHH------------HHHHHhhhccCCeEEECCCCcC
Confidence 379999756532 367899999999876653 221 110 0112222 3457999999999
Q ss_pred CchhHHHHHHHHHHHcCCCEEEEhHhHHHHHHHhccccccccCCCCcccCCCCCCCeeeeCCCCCcCCCCCcccccceee
Q 009814 375 RGVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRT 454 (524)
Q Consensus 375 rg~eg~i~air~are~~iP~LGICLGmQll~ie~gr~v~gl~~a~S~Ef~~~~~~pVi~l~~e~~~~~~GgtmrLg~~~v 454 (524)
+...+....+..+.+.++|+||||+|||+|+.++|+++..... .+. +.+.. .
T Consensus 60 ~~~~~~~~~l~~~~~~~~PilGIC~G~Qll~~~~Gg~v~~~~~---~~~-----g~~~~--------------------~ 111 (192)
T 1i1q_B 60 PSEAGCMPELLTRLRGKLPIIGICLGHQAIVEAYGGYVGQAGE---ILH-----GKATS--------------------I 111 (192)
T ss_dssp GGGSTTHHHHHHHHBTTBCEEEETHHHHHHHHHTSCCCCC------CCS-----SEEEE--------------------E
T ss_pred chhCchHHHHHHHHhcCCCEEEECcChHHHHHHhCCEEEeCCC---cEe-----cceeE--------------------E
Confidence 8544444444445677899999999999999999998743211 010 00000 0
Q ss_pred EeccCCcccccccCCcceeeeeeccccccChhhHHhhhcCCeEEEEEeCCCCeEEEEEECCCcEEEEec
Q 009814 455 YFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEVWTFNYKIAVLLNY 523 (524)
Q Consensus 455 ~l~~g~s~~~~iYg~~~~I~erhrHrYeVn~~~v~~l~~~Gl~~sg~~~dg~~VE~iE~~~hp~f~vqy 523 (524)
. ....++... .. ....-.+.|+|.|. .+ ..|+++.+. .+ ..++++++++.|++.|||
T Consensus 112 ~-~~~~~l~~~-~~--~~~~v~~~H~~~v~-----~l-p~~~~v~a~-~~-~~~~ai~~~~~~~~gvQf 168 (192)
T 1i1q_B 112 E-HDGQAMFAG-LA--NPLPVARYHSLVGS-----NV-PAGLTINAH-FN-GMVMAVRHDADRVCGFQF 168 (192)
T ss_dssp E-ECCCGGGTT-SC--SSEEEEECCC---C-----CC-CTTCEEEEE-ET-TEEEEEEETTTTEEEESS
T ss_pred e-cCCChHHhc-CC--CCcEEEechhhHhh-----hC-CCccEEEEC-CC-CcEEEEEECCCCEEEEEc
Confidence 0 011011111 11 11222477888764 22 357888874 34 469999999999999998
No 19
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}
Probab=99.64 E-value=4.4e-16 Score=169.66 Aligned_cols=166 Identities=19% Similarity=0.219 Sum_probs=104.9
Q ss_pred eEEEEEeccCCCcchH-HHHHHHHHHcCCceeEEeeeEE-eeCCCccccccCCChhhhhHHHHhccCCCEEEECCCCCCC
Q 009814 298 VRIAMVGKYTGLSDAY-LSILKALLHASVDLRKKLVIDW-IPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR 375 (524)
Q Consensus 298 v~IaiVGkY~~~~day-~SI~~aL~~ag~~~~v~v~i~~-i~s~~le~~~~~~~p~~y~~~~~~l~~~DGIllpGGfG~r 375 (524)
.+|+++ ||+. .| .+|.++|+++|+.+.+. .| .+.+++ .-.++|||||||||+++
T Consensus 11 ~~I~Il-D~g~---~~~~~i~r~lr~~Gv~~~i~---p~~~~~~~i-----------------~~~~~dgIILsGGp~sv 66 (527)
T 3tqi_A 11 HRILIL-DFGS---QYAQLIARRVREIGVYCELM---PCDIDEETI-----------------RDFNPHGIILSGGPETV 66 (527)
T ss_dssp SEEEEE-ECSC---TTHHHHHHHHHHHTCEEEEE---ETTCCSSSS-----------------TTTCCSEEEECCCCC--
T ss_pred CeEEEE-ECCC---ccHHHHHHHHHHCCCeEEEE---ECCCCHHHH-----------------HhcCCCEEEECCcCccc
Confidence 479999 5873 44 58899999999887764 11 111111 01267999999999987
Q ss_pred chhHHHHHHHHHHHcCCCEEEEhHhHHHHHHHhccccccccCCCCcccCCCCCCCeeeeCCCCCcCCCCCcccccceeeE
Q 009814 376 GVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTY 455 (524)
Q Consensus 376 g~eg~i~air~are~~iP~LGICLGmQll~ie~gr~v~gl~~a~S~Ef~~~~~~pVi~l~~e~~~~~~GgtmrLg~~~v~ 455 (524)
..++...+.+.+.+.++|+||||+|||+|+.++|+++...+ ..|+ |.+.+.
T Consensus 67 ~~~~~~~~~~~~~~~~~PvLGIC~G~Qlla~~lGG~V~~~~---~~e~--------------------------G~~~v~ 117 (527)
T 3tqi_A 67 TLSHTLRAPAFIFEIGCPVLGICYGMQTMAYQLGGKVNRTA---KAEF--------------------------GHAQLR 117 (527)
T ss_dssp -------CCCSTTTSSSCEEEETHHHHHHHHHSSSCBC--------CE--------------------------EEEEEE
T ss_pred ccCCChhhHHHHHhcCCCEEEEChHHHHHHHHcCCeEEeCC---Cccc--------------------------cceEEE
Confidence 55565666677788899999999999999999999985421 1121 222333
Q ss_pred eccCCcccccccCC-----cceeeeeeccccccChhhHHhhhcCCeEEEEEeCCCCeEEEEEECCCcEEEEec
Q 009814 456 FQIKDCKSAKLYGN-----RTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEVWTFNYKIAVLLNY 523 (524)
Q Consensus 456 l~~g~s~~~~iYg~-----~~~I~erhrHrYeVn~~~v~~l~~~Gl~~sg~~~dg~~VE~iE~~~hp~f~vqy 523 (524)
+.+++.++..+... .....-.+.|+|.|.. + ..|+++.+.+.++ .+++++++++|++.|||
T Consensus 118 ~~~~~~l~~~l~~~~~~~~~~~~~v~~~H~d~v~~-----l-p~g~~v~A~s~~~-~i~ai~~~~~~~~GvQF 183 (527)
T 3tqi_A 118 VLNPAFLFDGIEDQVSPQGEPLLDVWMSHGDIVSE-----L-PPGFEATACTDNS-PLAAMADFKRRFFGLQF 183 (527)
T ss_dssp ESSCTTTTSSCCSBCCTTSCCEEEEEEESSSCBCS-----C-CTTCEEEEEETTE-EEEEEECSSSCEEEESB
T ss_pred EcCCChhhcCCccccccccccceEEEEEcccchhc-----c-CCCCEEEEEeCCC-cEEEEEcCCCCEEEEEe
Confidence 33331122222110 0023335789998853 2 4589999999765 59999999999999998
No 20
>3r75_A Anthranilate/para-aminobenzoate synthases compone; ammonia channel, chorismate, type 1 glutamine amidotransfera phenazine biosynthesis, lyase; HET: CYG; 2.10A {Burkholderia SP} PDB: 3r74_A* 3r76_A*
Probab=99.64 E-value=3.1e-16 Score=174.41 Aligned_cols=160 Identities=9% Similarity=0.026 Sum_probs=105.0
Q ss_pred eEEEEEeccCCCcchHHHHHHHHHHcCCceeEEeeeEEeeCCCccccccCCChhhhhHHHHhccCCCEEEECCCCCCCch
Q 009814 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGV 377 (524)
Q Consensus 298 v~IaiVGkY~~~~day~SI~~aL~~ag~~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~l~~~DGIllpGGfG~rg~ 377 (524)
.+|.+++.|.+ ...++.++|+..|+.+.+. +.+.. ..+.++|||||+||||++..
T Consensus 447 k~IlviD~gds---f~~~l~~~l~~~G~~v~Vv----~~d~~------------------~~~~~~DgIIlsGGPg~p~d 501 (645)
T 3r75_A 447 CRALIVDAEDH---FTAMIAQQLSSLGLATEVC----GVHDA------------------VDLARYDVVVMGPGPGDPSD 501 (645)
T ss_dssp CEEEEEESSCT---HHHHHHHHHHHTTCEEEEE----ETTCC------------------CCGGGCSEEEECCCSSCTTC
T ss_pred CEEEEEECCcc---HHHHHHHHHHHCCCEEEEE----ECCCc------------------ccccCCCEEEECCCCCChhh
Confidence 47999964432 3468899999999876654 32221 12457899999999999843
Q ss_pred h------HHHHHHHHHHHcCCCEEEEhHhHHHHHHHhccccccccCCCCcccCCCCCCCeeeeCCCCCcCCCCCcccccc
Q 009814 378 Q------GKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGS 451 (524)
Q Consensus 378 e------g~i~air~are~~iP~LGICLGmQll~ie~gr~v~gl~~a~S~Ef~~~~~~pVi~l~~e~~~~~~GgtmrLg~ 451 (524)
. .+.++++++++.++|+||||||||+|+.+||+++.+.+. ++.|++
T Consensus 502 ~~~p~i~~~~~lI~~a~~~~iPiLGIClG~QlLa~alGG~V~~~~~-----------------------~~~G~~----- 553 (645)
T 3r75_A 502 AGDPRIARLYAWLRHLIDEGKPFMAVCLSHQILNAILGIPLVRREV-----------------------PNQGIQ----- 553 (645)
T ss_dssp TTSHHHHHHHHHHHHHHHHTCCEEEETHHHHHHHHHTTCCEEEEEE-----------------------EEEEEE-----
T ss_pred hhhhhHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHhCCEEEcCCC-----------------------cccccc-----
Confidence 3 367889999999999999999999999999999965432 112222
Q ss_pred eeeEeccCCcccccccCCcceeeeeeccccccChhhHHhhhcCCeEEEEEeCCCCeEEEEEECCCcEEEEec
Q 009814 452 RRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEVWTFNYKIAVLLNY 523 (524)
Q Consensus 452 ~~v~l~~g~s~~~~iYg~~~~I~erhrHrYeVn~~~v~~l~~~Gl~~sg~~~dg~~VE~iE~~~hp~f~vqy 523 (524)
+.+.+... ++...+|. ...+.+ | |... ...+ ..|+++++.+.++. ++++++++ ++.|||
T Consensus 554 ~~i~~~~~-~l~~~~~~-~~~v~~-~-h~~~-----~~~l-p~g~~v~A~s~dg~-i~Ai~~~~--~~GVQF 612 (645)
T 3r75_A 554 VEIDLFGQ-RERVGFYN-TYVAQT-V-RDEM-----DVDG-VGTVAISRDPRTGE-VHALRGPT--FSSMQF 612 (645)
T ss_dssp EEEEETTE-EEEEEEEE-EEEEBC-S-CSEE-----EETT-TEEEEEEECTTTCB-EEEEEETT--EEEESS
T ss_pred eEEeeecC-cceecCCC-cEEEEE-e-hhhc-----cccC-CCCeEEEEEcCCCc-EEEEEcCC--EEEEEe
Confidence 22222222 22223331 222221 2 2111 1112 35899999998775 99999885 699998
No 21
>2ywj_A Glutamine amidotransferase subunit PDXT; uncharacterized conserved protein, structural genomics; 1.90A {Methanocaldococcus jannaschii}
Probab=99.62 E-value=1e-15 Score=143.92 Aligned_cols=159 Identities=15% Similarity=0.171 Sum_probs=96.6
Q ss_pred eEEEEEeccCCCcchHHHHHHHHHHcCCceeEEeeeEEeeCCCccccccCCChhhhhHHHHhccCCCEEEECCCCCCCc-
Q 009814 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRG- 376 (524)
Q Consensus 298 v~IaiVGkY~~~~day~SI~~aL~~ag~~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~l~~~DGIllpGGfG~rg- 376 (524)
++|+++.- .++|.++.++|+.+|+.+.+. +.+ +.+.++|||++|||++.+.
T Consensus 1 m~i~vl~~----~g~~~~~~~~l~~~G~~~~~~------~~~------------------~~~~~~dglil~GG~~~~~~ 52 (186)
T 2ywj_A 1 MIIGVLAI----QGDVEEHEEAIKKAGYEAKKV------KRV------------------EDLEGIDALIIPGGESTAIG 52 (186)
T ss_dssp CEEEEECS----SSCCHHHHHHHHHTTSEEEEE------CSG------------------GGGTTCSEEEECCSCHHHHH
T ss_pred CEEEEEec----CcchHHHHHHHHHCCCEEEEE------CCh------------------HHhccCCEEEECCCCchhhh
Confidence 37899953 348889999999999865543 211 2467789999999987652
Q ss_pred ----hhHHHHHHHHHHHcCCCEEEEhHhHHHHHHHhccccccccCCCCcccCCCCCCCeeeeCCCCCcCCCCCcccccce
Q 009814 377 ----VQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSR 452 (524)
Q Consensus 377 ----~eg~i~air~are~~iP~LGICLGmQll~ie~gr~v~gl~~a~S~Ef~~~~~~pVi~l~~e~~~~~~GgtmrLg~~ 452 (524)
..+.++. ++++++|+||||+|||+|+.++|+++-++.. .+...... . .|. +...+
T Consensus 53 ~~~~~~~~~~~---i~~~~~PilGIC~G~Qll~~~~gg~~~~lg~-----------~~~~~~~~----~-~~~--~~~~~ 111 (186)
T 2ywj_A 53 KLMKKYGLLEK---IKNSNLPILGTCAGMVLLSKGTGINQILLEL-----------MDITVKRN----A-YGR--QVDSF 111 (186)
T ss_dssp HHHHHTTHHHH---HHTCCCCEEEETHHHHHHSSCCSSCCCCCCC-----------SSEEEETT----T-TCS--SSCCE
T ss_pred hhhhccCHHHH---HHhcCCcEEEECHHHHHHHHHhCCCcCccCC-----------CceeEEec----c-CCC--cccce
Confidence 1223344 4478999999999999999999887421110 01100000 0 010 01111
Q ss_pred eeEeccCCcccccccCCcceeeeeeccccccChhhHHhhhcCCeEEEEEeCCCCeEEEEEECCCcEEEEec
Q 009814 453 RTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEVWTFNYKIAVLLNY 523 (524)
Q Consensus 453 ~v~l~~g~s~~~~iYg~~~~I~erhrHrYeVn~~~v~~l~~~Gl~~sg~~~dg~~VE~iE~~~hp~f~vqy 523 (524)
... .++..+ .++.-.+.|+|.|+. ++..|+++++.+ | ..+|++|.+ +++.|||
T Consensus 112 ~~~-----~~~~~~----~~~~~~~~H~~~v~~-----l~~~~~~v~a~s-d-~~~~a~~~~--~~~gvQf 164 (186)
T 2ywj_A 112 EKE-----IEFKDL----GKVYGVFIRAPVVDK-----ILSDDVEVIARD-G-DKIVGVKQG--KYMALSF 164 (186)
T ss_dssp EEE-----EEETTT----EEEEEEESSCCEEEE-----ECCTTCEEEEEE-T-TEEEEEEET--TEEEESS
T ss_pred ecc-----cccccC----CcEEEEEEecceeee-----cCCCCeEEEEEE-C-CEEEEEeeC--CEEEEEC
Confidence 111 111111 112223568887752 213589999998 5 469999974 7999998
No 22
>3m3p_A Glutamine amido transferase; structural genomics, nysgrc, PSI-2; HET: MSE; 1.30A {Methylobacillus flagellatus} PDB: 3l83_A*
Probab=99.62 E-value=2.3e-15 Score=149.54 Aligned_cols=166 Identities=13% Similarity=0.190 Sum_probs=111.4
Q ss_pred EEEEEeccCCCcchHHHHHHHHHHcCCceeEEeeeEEeeCCCccccccCCChhhhhHHHHhccCCCEEEECCCCCCC---
Q 009814 299 RIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR--- 375 (524)
Q Consensus 299 ~IaiVGkY~~~~day~SI~~aL~~ag~~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~l~~~DGIllpGGfG~r--- 375 (524)
+|.++- ..... ...++.++|+..|+++.+. .....+ ..| +.+.++||||||||++++
T Consensus 5 ~vliiq-h~~~e-~~~~i~~~l~~~G~~v~v~----~~~~~~-------~~p-------~~~~~~d~lIl~GGp~~~~d~ 64 (250)
T 3m3p_A 5 PVMIIQ-FSASE-GPGHFGDFLAGEHIPFQVL----RMDRSD-------PLP-------AEIRDCSGLAMMGGPMSANDD 64 (250)
T ss_dssp CEEEEE-SSSSC-CCHHHHHHHHHTTCCEEEE----EGGGTC-------CCC-------SCGGGSSEEEECCCSSCTTSC
T ss_pred eEEEEE-CCCCC-CHHHHHHHHHHCCCeEEEE----eccCCC-------cCc-------CccccCCEEEECCCCCccccc
Confidence 566662 33222 5567888999999887664 211111 011 245689999999999864
Q ss_pred --chhHHHHHHHHHHHcCCCEEEEhHhHHHHHHHhccccccccCCCCcccCCCCCCCeeeeCCCCCcCCCCCccccccee
Q 009814 376 --GVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRR 453 (524)
Q Consensus 376 --g~eg~i~air~are~~iP~LGICLGmQll~ie~gr~v~gl~~a~S~Ef~~~~~~pVi~l~~e~~~~~~GgtmrLg~~~ 453 (524)
-+...++.++.+.+.++|+||||+|||+|+.++|++|...+. +++|| ++
T Consensus 65 ~~~~~~~~~~i~~~~~~~~PvlGIC~G~Qll~~~lGG~V~~~~~-----------------------~e~G~------~~ 115 (250)
T 3m3p_A 65 LPWMPTLLALIRDAVAQRVPVIGHCLGGQLLAKAMGGEVTDSPH-----------------------AEIGW------VR 115 (250)
T ss_dssp CTTHHHHHHHHHHHHHHTCCEEEETHHHHHHHHHTTCCEEEEEE-----------------------EEEEE------EE
T ss_pred chHHHHHHHHHHHHHHcCCCEEEECHHHHHHHHHhCCEEEeCCC-----------------------Cceee------EE
Confidence 345677889999999999999999999999999999865321 12233 33
Q ss_pred eEeccCCcccccccCCcceeeeeeccccccChhhHHhhhcCCeEEEEEeCCCCeEEEEEECCCcEEEEec
Q 009814 454 TYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEVWTFNYKIAVLLNY 523 (524)
Q Consensus 454 v~l~~g~s~~~~iYg~~~~I~erhrHrYeVn~~~v~~l~~~Gl~~sg~~~dg~~VE~iE~~~hp~f~vqy 523 (524)
+.+.+. +....+++-...+.-.|.|+|.|. + ..|+++.+.+.++ .+++++..+ +++.|||
T Consensus 116 v~~~~~-~~~~~l~g~~~~~~v~~~H~~~v~------l-p~~~~vlA~s~~~-~~~a~~~~~-~~~GvQf 175 (250)
T 3m3p_A 116 AWPQHV-PQALEWLGTWDELELFEWHYQTFS------I-PPGAVHILRSEHC-ANQAYVLDD-LHIGFQC 175 (250)
T ss_dssp EEECSS-HHHHHHHSCSSCEEEEEEEEEEEC------C-CTTEEEEEEETTE-EEEEEEETT-TEEEESS
T ss_pred EEEecC-CCCcccccCCCccEEEEEccceee------c-CCCCEEEEEeCCC-CEEEEEECC-eeEEEEe
Confidence 444332 222233321223333578888872 2 4589999999886 599999988 4999998
No 23
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1
Probab=99.62 E-value=6.9e-16 Score=168.03 Aligned_cols=162 Identities=15% Similarity=0.189 Sum_probs=106.0
Q ss_pred eEEEEEeccCCCcchH-HHHHHHHHHcCCceeEEeeeEEeeCCCccccccCCChhhhhHHHHhc--cCCCEEEECCCCCC
Q 009814 298 VRIAMVGKYTGLSDAY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGFGN 374 (524)
Q Consensus 298 v~IaiVGkY~~~~day-~SI~~aL~~ag~~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~l--~~~DGIllpGGfG~ 374 (524)
.+|+++ +|+. .| .++.++|+.+|+.+.+. +.+. ++ +.+ .++|||||||||++
T Consensus 8 ~~IlIl-D~g~---~~~~~i~r~lr~~G~~~~i~------p~~~--------~~-------~~i~~~~~dgiILsGGp~s 62 (525)
T 1gpm_A 8 HRILIL-DFGS---QYTQLVARRVRELGVYCELW------AWDV--------TE-------AQIRDFNPSGIILSGGPES 62 (525)
T ss_dssp SEEEEE-ECSC---TTHHHHHHHHHHTTCEEEEE------ESCC--------CH-------HHHHHHCCSEEEECCCSSC
T ss_pred CEEEEE-ECCC---ccHHHHHHHHHHCCCEEEEE------ECCC--------CH-------HHHhccCCCEEEECCcCcc
Confidence 579999 5873 33 57889999999876654 2211 01 122 26899999999987
Q ss_pred CchhHHHHHHHHHHHcCCCEEEEhHhHHHHHHHhccccccccCCCCcccCCCCCCCeeeeCCCCCcCCCCCcccccceee
Q 009814 375 RGVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRT 454 (524)
Q Consensus 375 rg~eg~i~air~are~~iP~LGICLGmQll~ie~gr~v~gl~~a~S~Ef~~~~~~pVi~l~~e~~~~~~GgtmrLg~~~v 454 (524)
+..++.....+.+.+.++|+||||+|||+|+.++|+++.+.+ +.|++ .+.+
T Consensus 63 ~~~~~~~~~~~~~~~~g~PvLGIC~G~Qlla~~~GG~V~~~~---~~e~G--------------------------~~~v 113 (525)
T 1gpm_A 63 TTEENSPRAPQYVFEAGVPVFGVCYGMQTMAMQLGGHVEASN---EREFG--------------------------YAQV 113 (525)
T ss_dssp TTSTTCCCCCGGGGTSSSCEEEETHHHHHHHHHHTCEEECCS---SCEEE--------------------------EEEE
T ss_pred ccccCCcchHHHHHHCCCCEEEEChHHHHHHHHcCCEEEeCC---Ccccc--------------------------eEEE
Confidence 632221222355667899999999999999999999996532 22221 1122
Q ss_pred EeccCCcccccccCC--------cceeeeeeccccccChhhHHhhhcCCeEEEEEeCCCCeEEEEEECCCcEEEEec
Q 009814 455 YFQIKDCKSAKLYGN--------RTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEVWTFNYKIAVLLNY 523 (524)
Q Consensus 455 ~l~~g~s~~~~iYg~--------~~~I~erhrHrYeVn~~~v~~l~~~Gl~~sg~~~dg~~VE~iE~~~hp~f~vqy 523 (524)
.+.++ +.+.+-+.. ...+ .+.|+|.|.. + ..|++++|.++++. ++++++++++++.|||
T Consensus 114 ~~~~~-~~L~~~l~~~~~~~~~~~~~v--~~~H~~~V~~-----l-p~g~~v~A~s~~~~-i~ai~~~~~~i~gvQF 180 (525)
T 1gpm_A 114 EVVND-SALVRGIEDALTADGKPLLDV--WMSHGDKVTA-----I-PSDFITVASTESCP-FAIMANEEKRFYGVQF 180 (525)
T ss_dssp EECSC-CTTTTTCCSEECTTSCEEEEE--EEEECSEEEE-----C-CTTCEEEEECSSCS-CSEEEETTTTEEEESB
T ss_pred EeCCC-CHhhccCccccccccccceEE--EEEccceeee-----C-CCCCEEEEECCCCC-EEEEEECCCCEEEEec
Confidence 22222 111111111 1223 3678888742 2 46899999998875 9999999999999998
No 24
>1gpw_B Amidotransferase HISH; lyase/transferase, complex (lyase/transferase), histidine biosynthesis, glutaminase, glutamine amidotransferase; 2.4A {Thermotoga maritima} SCOP: c.23.16.1 PDB: 1k9v_F 1kxj_A 2wjz_B
Probab=99.61 E-value=8.3e-16 Score=146.20 Aligned_cols=162 Identities=19% Similarity=0.212 Sum_probs=101.2
Q ss_pred eEEEEEeccCCCcchHHHHHHHHHHcC-----CceeEEeeeEEeeCCCccccccCCChhhhhHHHHhccCCCEEEECCCC
Q 009814 298 VRIAMVGKYTGLSDAYLSILKALLHAS-----VDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGF 372 (524)
Q Consensus 298 v~IaiVGkY~~~~day~SI~~aL~~ag-----~~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~l~~~DGIllpGGf 372 (524)
++|+++ +|+ . .++.|+.++|+.+| +++.+. +.. +. .++|||+||||
T Consensus 1 m~I~ii-d~~-~-g~~~s~~~~l~~~G~~~~~~~~~~~------~~~------------------~~-~~~dglilpG~- 51 (201)
T 1gpw_B 1 MRIGII-SVG-P-GNIMNLYRGVKRASENFEDVSIELV------ESP------------------RN-DLYDLLFIPGV- 51 (201)
T ss_dssp CEEEEE-CCS-S-SCCHHHHHHHHHHSTTBSSCEEEEE------CSC------------------CS-SCCSEEEECCC-
T ss_pred CEEEEE-ecC-C-chHHHHHHHHHHcCCCCCceEEEEE------CCC------------------cc-cCCCEEEECCC-
Confidence 379999 586 2 26788999999998 655543 211 13 57899999884
Q ss_pred CCCchh-------HHHHHHHHHHHcCCCEEEEhHhHHHHHHHhc--cccccccCCCCcccCCCCCCCeeeeCCCCCcCCC
Q 009814 373 GNRGVQ-------GKILAAKYAREHRIPYLGICLGMQVAVIEFA--RSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHM 443 (524)
Q Consensus 373 G~rg~e-------g~i~air~are~~iP~LGICLGmQll~ie~g--r~v~gl~~a~S~Ef~~~~~~pVi~l~~e~~~~~~ 443 (524)
|+++.. +..+.++.+.++++|+||||+|||+|+.+++ ++.-++.. ....+... +..+.+|+
T Consensus 52 g~~~~~~~~l~~~~~~~~i~~~~~~~~PilGIC~G~Qll~~~~g~~G~~~~l~~---------~~g~v~~~-~~~~~~~~ 121 (201)
T 1gpw_B 52 GHFGEGMRRLRENDLIDFVRKHVEDERYVVGVCLGMQLLFEESEEAPGVKGLSL---------IEGNVVKL-RSRRLPHM 121 (201)
T ss_dssp SCSHHHHHHHHHTTCHHHHHHHHHTTCEEEEETHHHHTTSSEETTEEEEECCCS---------SSEEEEEC-CCSSCSEE
T ss_pred CcHHHHHHHHHhhCHHHHHHHHHHcCCeEEEEChhHHHHHHhhccCCCCCCcce---------eeeEEEEc-CCCCCCcc
Confidence 665321 4678889998999999999999999999886 33211110 01112111 10022344
Q ss_pred CCcccccceeeEeccCCcccccccCCcceeeeeeccccccChhhHHhhhcCCeEEEEEeCC-CCeEEEEEECCCcEEEEe
Q 009814 444 GGTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDET-SQRMEVWTFNYKIAVLLN 522 (524)
Q Consensus 444 GgtmrLg~~~v~l~~g~s~~~~iYg~~~~I~erhrHrYeVn~~~v~~l~~~Gl~~sg~~~d-g~~VE~iE~~~hp~f~vq 522 (524)
|| +++.+... + . ...+ .+.|+|.|.+. ++++.+.+++ |..+|+++.++ +++.||
T Consensus 122 g~------~~l~~~~~-~--~-----~~~v--~~~H~~~v~~~--------~~~vla~s~~~g~~~~a~~~~~-~i~gvQ 176 (201)
T 1gpw_B 122 GW------NEVIFKDT-F--P-----NGYY--YFVHTYRAVCE--------EEHVLGTTEYDGEIFPSAVRKG-RILGFQ 176 (201)
T ss_dssp EE------EEEEESSS-S--C-----CEEE--EEEESEEEEEC--------GGGEEEEEEETTEEEEEEEEET-TEEEES
T ss_pred cc------eeeEeccC-C--C-----CCeE--EEECcceeccC--------CCEEEEEEccCCceEEEEEECC-CEEEEE
Confidence 43 23332221 1 0 1112 36688888542 4567888775 64699999987 899999
Q ss_pred c
Q 009814 523 Y 523 (524)
Q Consensus 523 y 523 (524)
|
T Consensus 177 f 177 (201)
T 1gpw_B 177 F 177 (201)
T ss_dssp S
T ss_pred C
Confidence 8
No 25
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*
Probab=99.61 E-value=6.5e-16 Score=167.35 Aligned_cols=159 Identities=14% Similarity=0.130 Sum_probs=104.0
Q ss_pred EEEEeccCCCcchH-HHHHHHHHHcCCceeEEeeeEEeeCCCccccccCCChhhhhHHHHhc--cCCCEEEECCCCCCCc
Q 009814 300 IAMVGKYTGLSDAY-LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGFGNRG 376 (524)
Q Consensus 300 IaiVGkY~~~~day-~SI~~aL~~ag~~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~l--~~~DGIllpGGfG~rg 376 (524)
|+++ ||+. .| .+|.++|+.+|+.+.+. +.+. ++ +.+ .++|||||||||++..
T Consensus 2 i~il-D~g~---~~~~~i~r~l~~~G~~~~i~------p~~~--------~~-------~~i~~~~~dgiIlsGGp~s~~ 56 (503)
T 2ywb_A 2 VLVL-DFGS---QYTRLIARRLRELRAFSLIL------PGDA--------PL-------EEVLKHRPQALILSGGPRSVF 56 (503)
T ss_dssp EEEE-ESSC---TTHHHHHHHHHTTTCCEEEE------ETTC--------CH-------HHHHTTCCSEEEECCCSSCSS
T ss_pred EEEE-ECCC---cHHHHHHHHHHHCCCEEEEE------ECCC--------CH-------HHHHhcCCCEEEECCCCchhc
Confidence 7888 5873 34 58999999999887654 2211 01 222 2579999999998762
Q ss_pred hhHHHHHHHHHHHcCCCEEEEhHhHHHHHHHhccccccccCCCCcccCCCCCCCeeeeCCCCCcCCCCCcccccceeeEe
Q 009814 377 VQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYF 456 (524)
Q Consensus 377 ~eg~i~air~are~~iP~LGICLGmQll~ie~gr~v~gl~~a~S~Ef~~~~~~pVi~l~~e~~~~~~GgtmrLg~~~v~l 456 (524)
.++.....+.+.+.++|+||||+|||+|+.++|+++.+.+ ..|+ |+ +.+.+
T Consensus 57 ~~~~~~~~~~~~~~~~PvLGIC~G~Qlla~~~GG~v~~~~---~~e~--------------------G~------~~v~~ 107 (503)
T 2ywb_A 57 DPDAPRPDPRLFSSGLPLLGICYGMQLLAQELGGRVERAG---RAEY--------------------GK------ALLTR 107 (503)
T ss_dssp CTTCCCCCGGGGCSSCCEEEETHHHHHHHHTTTCEEECC------CE--------------------EE------EECSE
T ss_pred cCCCcchHHHHHhCCCCEEEECHHHHHHHHHhCCeEeeCC---CCcc--------------------ce------EEEEe
Confidence 2221122355667899999999999999999999986432 1121 21 12222
Q ss_pred ccCCcccccccCCcceeeeeeccccccChhhHHhhhcCCeEEEEEeCCCCeEEEEEECCCcEEEEec
Q 009814 457 QIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEVWTFNYKIAVLLNY 523 (524)
Q Consensus 457 ~~g~s~~~~iYg~~~~I~erhrHrYeVn~~~v~~l~~~Gl~~sg~~~dg~~VE~iE~~~hp~f~vqy 523 (524)
.+ +.+.+-+.....+ .+.|+|.|.. + ..|++++|.+.++. +++++++++|++.|||
T Consensus 108 ~~--~~l~~~~~~~~~v--~~~H~~~v~~-----l-p~g~~v~A~s~~~~-i~ai~~~~~~~~gvQF 163 (503)
T 2ywb_A 108 HE--GPLFRGLEGEVQV--WMSHQDAVTA-----P-PPGWRVVAETEENP-VAAIASPDGRAYGVQF 163 (503)
T ss_dssp EC--SGGGTTCCSCCEE--EEECSCEEEE-----C-CTTCEEEEECSSCS-CSEEECTTSSEEEESB
T ss_pred cC--cHHhhcCCCccEE--EEECCCcccc-----C-CCCCEEEEEECCCC-EEEEEeCCCCEEEEec
Confidence 11 1122222212223 3778998852 2 46899999998865 9999999999999998
No 26
>3l7n_A Putative uncharacterized protein; glutamine amidotransferase, transferas; 2.70A {Streptococcus mutans}
Probab=99.59 E-value=1e-14 Score=142.92 Aligned_cols=165 Identities=14% Similarity=0.115 Sum_probs=106.9
Q ss_pred EEEEEeccCCCcchHHHHHHHHHHcCCceeEEeeeEEeeCCCccccccCCChhhhhHHHHhccCCCEEEECCCCCCCc--
Q 009814 299 RIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRG-- 376 (524)
Q Consensus 299 ~IaiVGkY~~~~day~SI~~aL~~ag~~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~l~~~DGIllpGGfG~rg-- 376 (524)
+|+++ ...... ....+.+.|+..|+++.+. .+...+ ..| +.+.++|||||||||+++.
T Consensus 2 ~i~vi-~h~~~e-~~g~~~~~l~~~g~~~~~~----~~~~~~-------~~p-------~~~~~~d~lii~GGp~~~~~~ 61 (236)
T 3l7n_A 2 RIHFI-LHETFE-APGAYLAWAALRGHDVSMT----KVYRYE-------KLP-------KDIDDFDMLILMGGPQSPSST 61 (236)
T ss_dssp EEEEE-ECCTTS-CCHHHHHHHHHTTCEEEEE----EGGGTC-------CCC-------SCGGGCSEEEECCCSSCTTCC
T ss_pred eEEEE-eCCCCC-CchHHHHHHHHCCCeEEEE----eeeCCC-------CCC-------CCccccCEEEECCCCCCcccc
Confidence 56666 343332 5567778888899877654 222111 011 2356899999999999851
Q ss_pred ------h--hHHHHHHHHHHHcCCCEEEEhHhHHHHHHHhccccccccCCCCcccCCCCCCCeeeeCCCCCcCCCCCccc
Q 009814 377 ------V--QGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMR 448 (524)
Q Consensus 377 ------~--eg~i~air~are~~iP~LGICLGmQll~ie~gr~v~gl~~a~S~Ef~~~~~~pVi~l~~e~~~~~~Ggtmr 448 (524)
+ ....+.++.+.+.++|+||||+|||+|+.++|+++.+.+. +++
T Consensus 62 ~~~~~~~~~~~~~~~i~~~~~~~~PvLGIClG~QlL~~~~Gg~v~~~~~-----------------------~~~----- 113 (236)
T 3l7n_A 62 KKEFPYYDAQAEVKLIQKAAKSEKIIVGVCLGAQLMGVAYGADYLHSPK-----------------------KEI----- 113 (236)
T ss_dssp TTTCTTCCHHHHHHHHHHHHHTTCEEEEETHHHHHHHHHTTCCCEEEEE-----------------------EEE-----
T ss_pred cccCcccchHHHHHHHHHHHHcCCCEEEEchHHHHHHHHhCCEEecCCC-----------------------cee-----
Confidence 1 3478999999999999999999999999999998754321 111
Q ss_pred ccceeeEeccC--CcccccccCCcceeeeeeccccccChhhHHhhhcCCeEEEEEeCCCCeEEEEEECCCcEEEEec
Q 009814 449 LGSRRTYFQIK--DCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEVWTFNYKIAVLLNY 523 (524)
Q Consensus 449 Lg~~~v~l~~g--~s~~~~iYg~~~~I~erhrHrYeVn~~~v~~l~~~Gl~~sg~~~dg~~VE~iE~~~hp~f~vqy 523 (524)
|.+++.+.+. .+.+.+... ....-.|.|++.+ .+ ..++++.+.+.++. +++++..+ +++.|||
T Consensus 114 -G~~~v~~~~~~~~~~l~~~~~--~~~~v~~~H~~~~------~l-p~~~~vla~s~~~~-~~a~~~~~-~v~gvQf 178 (236)
T 3l7n_A 114 -GNYLISLTEAGKMDSYLSDFS--DDLLVGHWHGDMP------GL-PDKAQVLAISQGCP-RQIIKFGP-KQYAFQC 178 (236)
T ss_dssp -EEEEEEECTTGGGCGGGTTSC--SEEEEEEEEEEEC------CC-CTTCEEEEECSSCS-CSEEEEET-TEEEESS
T ss_pred -eeEEEEEccCcccChHHhcCC--CCcEEEEecCCcc------cC-CChheEEEECCCCC-EEEEEECC-CEEEEEe
Confidence 2234444331 011222221 2233346677642 12 35899999998775 99999875 8999997
No 27
>3d54_D Phosphoribosylformylglycinamidine synthase 1; alpha-beta structure, ATP-binding, cytoplasm, ligase, nucleotide-binding, purine biosynthesis; HET: CYG ADP; 3.50A {Thermotoga maritima}
Probab=99.59 E-value=1.2e-14 Score=138.57 Aligned_cols=164 Identities=16% Similarity=0.088 Sum_probs=107.2
Q ss_pred eEEEEEeccCCCcchHHHHHHHHHHcCCceeEEeeeEEeeCCCccccccCCChhhhhHHHHhccCCCEEEECCCCCCC-c
Q 009814 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR-G 376 (524)
Q Consensus 298 v~IaiVGkY~~~~day~SI~~aL~~ag~~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~l~~~DGIllpGGfG~r-g 376 (524)
++|+++ .|.... ...++.++|+.+|+.+.+. +.. +.+.++||||||||++.. .
T Consensus 3 ~~i~il-~~~~~~-~~~~~~~~l~~~g~~~~~~------~~~------------------~~~~~~d~lil~Gg~~~~~~ 56 (213)
T 3d54_D 3 PRACVV-VYPGSN-CDRDAYHALEINGFEPSYV------GLD------------------DKLDDYELIILPGGFSYGDY 56 (213)
T ss_dssp CEEEEE-CCTTEE-EHHHHHHHHHTTTCEEEEE------CTT------------------CCCSSCSEEEECEECGGGGC
T ss_pred cEEEEE-EcCCCC-ccHHHHHHHHHCCCEEEEE------ecC------------------CCcccCCEEEECCCCchhhh
Confidence 579999 465432 2357899999999765543 211 135678999999997632 1
Q ss_pred --------hhHHHHHHHHHHHcCCCEEEEhHhHHHHHHH--hccccccccCCCCcccCCCCCCCeeeeCCCCCcCCCCCc
Q 009814 377 --------VQGKILAAKYAREHRIPYLGICLGMQVAVIE--FARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGT 446 (524)
Q Consensus 377 --------~eg~i~air~are~~iP~LGICLGmQll~ie--~gr~v~gl~~a~S~Ef~~~~~~pVi~l~~e~~~~~~Ggt 446 (524)
.....+.++.+.++++|+||||+|||+|+.+ +++++...+. .. .|.|
T Consensus 57 ~~~~~~~~~~~~~~~l~~~~~~~~pilgIC~G~qlLa~aGll~g~v~~~~~--------------------~~-~~~g-- 113 (213)
T 3d54_D 57 LRPGAVAAREKIAFEIAKAAERGKLIMGICNGFQILIEMGLLKGALLQNSS--------------------GK-FICK-- 113 (213)
T ss_dssp SSTTHHHHTSTTHHHHHHHHHHTCEEEECHHHHHHHHHHTSSCSEEECCSS--------------------SS-CBCC--
T ss_pred hccccccccHHHHHHHHHHHHCCCEEEEECHHHHHHHHcCCCCCCeecCCC--------------------Cc-eEee--
Confidence 2456788999888999999999999999988 5554421110 00 1223
Q ss_pred ccccceeeEec-cCCcccccccCCcceeeeeecc---ccccChhhHHhhhcCCeEEEEEeCC--C--CeEEEEEECCCcE
Q 009814 447 MRLGSRRTYFQ-IKDCKSAKLYGNRTFIDERHRH---RYEVNPDMIARLENAGLSFTGKDET--S--QRMEVWTFNYKIA 518 (524)
Q Consensus 447 mrLg~~~v~l~-~g~s~~~~iYg~~~~I~erhrH---rYeVn~~~v~~l~~~Gl~~sg~~~d--g--~~VE~iE~~~hp~ 518 (524)
.+++.+. ++ +.+.+.++....+.--+.| +|.+.+ .++.+.+.+.+ | ..+|+++.++.++
T Consensus 114 ----~~~v~~~~~~-~~l~~~~~~~~~~~~~~~H~~~s~~~~~--------~~~~~~a~~~~~ng~~~~i~a~~~~~~~~ 180 (213)
T 3d54_D 114 ----WVDLIVENND-TPFTNAFEKGEKIRIPIAHGFGRYVKID--------DVNVVLRYVKDVNGSDERIAGVLNESGNV 180 (213)
T ss_dssp ----EEEEEECCCS-STTSTTSCTTCEEEEECCBSSCEEECSS--------CCEEEEEESSCSSCCGGGEEEEECSSSCE
T ss_pred ----eEEEEeCCCC-CceeeccCCCCEEEEEeecCceEEEecC--------CCcEEEEEcCCCCCCccceeEEEcCCCCE
Confidence 3345554 34 4444444211223221245 888754 37888888765 6 5799999988999
Q ss_pred EEEec
Q 009814 519 VLLNY 523 (524)
Q Consensus 519 f~vqy 523 (524)
+.|||
T Consensus 181 ~gvQf 185 (213)
T 3d54_D 181 FGLMP 185 (213)
T ss_dssp EEECS
T ss_pred EEEeC
Confidence 99998
No 28
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens}
Probab=99.57 E-value=4e-15 Score=166.84 Aligned_cols=161 Identities=16% Similarity=0.136 Sum_probs=101.0
Q ss_pred eEEEEEeccCCCcchHH-HHHHHHHHcCCceeEEeeeEEeeCCCccccccCCChhhhhHHHHhc--cCCCEEEECCCCCC
Q 009814 298 VRIAMVGKYTGLSDAYL-SILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPGGFGN 374 (524)
Q Consensus 298 v~IaiVGkY~~~~day~-SI~~aL~~ag~~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~l--~~~DGIllpGGfG~ 374 (524)
.+|++++ |+. .|. .|.++|+.+|+.+.+. +.+.- + +.+ .++|||||||||++
T Consensus 30 ~~I~VLD-fg~---q~~~liar~lre~Gv~~~iv------p~~~~--------~-------e~i~~~~~dGIILsGGp~s 84 (697)
T 2vxo_A 30 GAVVILD-AGA---QYGKVIDRRVRELFVQSEIF------PLETP--------A-------FAIKEQGFRAIIISGGPNS 84 (697)
T ss_dssp CCEEEEE-EC-----CHHHHHHHHHHTTCCEEEE------ETTCC--------H-------HHHHHHTCSEEEEEECC--
T ss_pred CEEEEEE-CCC---chHHHHHHHHHHCCCEEEEE------ECCCC--------H-------HHHhhcCCCEEEECCCCCc
Confidence 4688884 652 333 4779999999887664 32210 0 222 58999999999998
Q ss_pred CchhHHHHHHHHHHHcCCCEEEEhHhHHHHHHHhccccccccCCCCcccCCCCCCCeeeeCCCCCcCCCCCcccccceee
Q 009814 375 RGVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRT 454 (524)
Q Consensus 375 rg~eg~i~air~are~~iP~LGICLGmQll~ie~gr~v~gl~~a~S~Ef~~~~~~pVi~l~~e~~~~~~GgtmrLg~~~v 454 (524)
+..++.....+.+.+.++|+||||+|||+|+.++|+++.+++ ..| .| .+++
T Consensus 85 ~~~~~~~~~~~~i~~~g~PvLGIC~G~QlLa~~lGG~v~~~~---~~e--------------------~G------~~~v 135 (697)
T 2vxo_A 85 VYAEDAPWFDPAIFTIGKPVLGICYGMQMMNKVFGGTVHKKS---VRE--------------------DG------VFNI 135 (697)
T ss_dssp -----CCCCCGGGTTSSCCEEEEEHHHHHHHHHTTCCBCC------------------------------------CEEE
T ss_pred ccCccchhHHHHHHhCCCCEEEECHHHHHHHHHhCCeEeecC---CCc--------------------cc------eEEE
Confidence 522111112234457889999999999999999999986532 112 12 2344
Q ss_pred EeccCCcccccccCCcceeeeeeccccccChhhHHhhhcCCeEEEEEeCCCCeEEEEEECCCcEEEEec
Q 009814 455 YFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEVWTFNYKIAVLLNY 523 (524)
Q Consensus 455 ~l~~g~s~~~~iYg~~~~I~erhrHrYeVn~~~v~~l~~~Gl~~sg~~~dg~~VE~iE~~~hp~f~vqy 523 (524)
.+.++ +.+.+-+.....+ .+.|+|.|.. + ..|+++++.+. + .+++++++++|++.|||
T Consensus 136 ~~~~~-~~Lf~~l~~~~~v--~~~H~~~V~~-----l-p~g~~vlA~s~-~-~i~ai~~~~~~i~GvQF 193 (697)
T 2vxo_A 136 SVDNT-CSLFRGLQKEEVV--LLTHGDSVDK-----V-ADGFKVVARSG-N-IVAGIANESKKLYGAQF 193 (697)
T ss_dssp EECTT-SGGGTTCCSEEEE--CCCSSCCBSS-----C-CTTCEEEEEET-T-EEEEEEETTTTEEEESS
T ss_pred EecCC-ChhhhcCCccCcc--eeecccceec-----C-CCCeEEEEEeC-C-ceEEEEeCCCCEEEEEe
Confidence 44444 4344434222233 3668998852 2 45899999984 4 79999999999999998
No 29
>2ywd_A Glutamine amidotransferase subunit PDXT; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.46 E-value=1.4e-13 Score=129.27 Aligned_cols=160 Identities=12% Similarity=0.093 Sum_probs=100.1
Q ss_pred eEEEEEeccCCCcchHHHHHHHHHHcCCceeEEeeeEEeeCCCccccccCCChhhhhHHHHhccCCCEEEECCCCCCC--
Q 009814 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR-- 375 (524)
Q Consensus 298 v~IaiVGkY~~~~day~SI~~aL~~ag~~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~l~~~DGIllpGGfG~r-- 375 (524)
++|+++. + .+++.++.++|+.+|+.+.+. +.. +.+.++|||++|||++..
T Consensus 3 p~Igi~~-~---~~~~~~~~~~l~~~G~~~~~~------~~~------------------~~l~~~dglil~GG~~~~~~ 54 (191)
T 2ywd_A 3 GVVGVLA-L---QGDFREHKEALKRLGIEAKEV------RKK------------------EHLEGLKALIVPGGESTTIG 54 (191)
T ss_dssp CCEEEEC-S---SSCHHHHHHHHHTTTCCCEEE------CSG------------------GGGTTCSEEEECSSCHHHHH
T ss_pred cEEEEEe-c---CCchHHHHHHHHHCCCEEEEe------CCh------------------hhhccCCEEEECCCChhhhH
Confidence 5799985 3 247889999999999877653 211 245678999999996431
Q ss_pred c---hhHHHHHHHHHHHcC-CCEEEEhHhHHHHHHHhcc-ccccccCCCCcccCCCCCCCeeeeCCCCCcCCCCCccccc
Q 009814 376 G---VQGKILAAKYAREHR-IPYLGICLGMQVAVIEFAR-SVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLG 450 (524)
Q Consensus 376 g---~eg~i~air~are~~-iP~LGICLGmQll~ie~gr-~v~gl~~a~S~Ef~~~~~~pVi~l~~e~~~~~~GgtmrLg 450 (524)
. .....+.++.+.+++ +|+||||+|||+|+.++|+ ++. +.. + -.|..... ...|. +..
T Consensus 55 ~~~~~~~~~~~i~~~~~~~~~PilGiC~G~Q~l~~~~gg~~~~--~~l-----g---~~~~~~~~-----~~~g~--~~~ 117 (191)
T 2ywd_A 55 KLAREYGIEDEVRKRVEEGSLALFGTCAGAIWLAKEIVGYPEQ--PRL-----G---VLEAWVER-----NAFGR--QVE 117 (191)
T ss_dssp HHHHHTTHHHHHHHHHHTTCCEEEEETHHHHHHEEEETTCTTC--CCC-----C---CEEEEEET-----TCSCC--SSS
T ss_pred HhhhhhhHHHHHHHHHHCCCCeEEEECHHHHHHHHHhCCCCCC--ccc-----c---ccceEEEc-----CCcCC--ccc
Confidence 1 135678888888889 9999999999999999987 431 110 0 00110000 00111 111
Q ss_pred ce--eeEeccCCcccccccCCcceeeeeeccccccChhhHHhhhcCCeEEEEEeCCCCeEEEEEECCCcEEEEec
Q 009814 451 SR--RTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEVWTFNYKIAVLLNY 523 (524)
Q Consensus 451 ~~--~v~l~~g~s~~~~iYg~~~~I~erhrHrYeVn~~~v~~l~~~Gl~~sg~~~dg~~VE~iE~~~hp~f~vqy 523 (524)
.+ ...+ ++ + ..+...+.|+|.+.+ + ..++++.+.+ + ..+|+++..+ ++.+||
T Consensus 118 ~~~~~~~~-~~------~----~~~~~~~~Hs~~v~~-----l-~~~~~~~a~~-~-~~~~a~~~~~--~~gvQf 171 (191)
T 2ywd_A 118 SFEEDLEV-EG------L----GSFHGVFIRAPVFRR-----L-GEGVEVLARL-G-DLPVLVRQGK--VLASSF 171 (191)
T ss_dssp EEEEEEEE-TT------T----EEEEEEEESCCEEEE-----E-CTTCEEEEEE-T-TEEEEEEETT--EEEESS
T ss_pred cccccccc-cC------C----CceeEEEEcccceec-----c-CCCcEEEEEE-C-CEEEEEEECC--EEEEEe
Confidence 11 1111 11 1 122234678887641 1 3478898888 4 5699999864 999997
No 30
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1
Probab=99.45 E-value=2.3e-13 Score=129.56 Aligned_cols=164 Identities=24% Similarity=0.271 Sum_probs=101.0
Q ss_pred eEEEEEeccCCCcchHHHHHHHHHHcCCceeEEeeeEEeeCCCccccccCCChhhhhHHHHhccCCCEEEECCCCCCCch
Q 009814 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGV 377 (524)
Q Consensus 298 v~IaiVGkY~~~~day~SI~~aL~~ag~~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~l~~~DGIllpGGfG~rg~ 377 (524)
++|+++ +|+ . .++.++.++|+.+|+.+.+. +.+ +.+.++|||++|| +|++..
T Consensus 3 ~~I~ii-d~~-~-~~~~~~~~~l~~~G~~~~~~------~~~------------------~~l~~~d~lil~G-~g~~~~ 54 (200)
T 1ka9_H 3 MKALLI-DYG-S-GNLRSAAKALEAAGFSVAVA------QDP------------------KAHEEADLLVLPG-QGHFGQ 54 (200)
T ss_dssp CEEEEE-CSS-C-SCHHHHHHHHHHTTCEEEEE------SST------------------TSCSSCSEEEECC-CSCHHH
T ss_pred cEEEEE-eCC-C-ccHHHHHHHHHHCCCeEEEe------cCh------------------HHcccCCEEEECC-CCcHHH
Confidence 479999 575 2 37788899999999876653 211 2356899999977 455421
Q ss_pred -------hHHHHHHHHHHHcCCCEEEEhHhHHHHHHH---hccccccccCCCCcccCCCCCCCeeeeCCCCCcCCCCCcc
Q 009814 378 -------QGKILAAKYAREHRIPYLGICLGMQVAVIE---FARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTM 447 (524)
Q Consensus 378 -------eg~i~air~are~~iP~LGICLGmQll~ie---~gr~v~gl~~a~S~Ef~~~~~~pVi~l~~e~~~~~~Ggtm 447 (524)
.+..+.++.+.++++|+||||+|||+|+.+ +|+ . ++.. . .+..+... +..+.+++||
T Consensus 55 ~~~~l~~~~~~~~i~~~~~~~~PilGIC~G~Qll~~~~~~~Gg-~---~~l~--~----~~g~v~~~-~~~~~~~~G~-- 121 (200)
T 1ka9_H 55 VMRAFQESGFVERVRRHLERGLPFLGICVGMQVLYEGSEEAPG-V---RGLG--L----VPGEVRRF-RAGRVPQMGW-- 121 (200)
T ss_dssp HHHTTSSSCTHHHHHHHHHTTCCEEECTHHHHTTSSEETTSTT-C---CCCC--S----SSSEEEEC-CSSSSSEEEE--
T ss_pred HHHHHHhcCHHHHHHHHHHcCCeEEEEcHHHHHHHHhccccCC-c---CCcc--c----cccEEEEC-CCCCCCceeE--
Confidence 346788999999999999999999999987 443 1 1110 0 11122221 1012234444
Q ss_pred cccceeeEeccCCcccccccCCcceeeeeeccccccChhhHHhhhcCCeEEEEEeCC-CCeEEEEEECCCcEEEEec
Q 009814 448 RLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDET-SQRMEVWTFNYKIAVLLNY 523 (524)
Q Consensus 448 rLg~~~v~l~~g~s~~~~iYg~~~~I~erhrHrYeVn~~~v~~l~~~Gl~~sg~~~d-g~~VE~iE~~~hp~f~vqy 523 (524)
+++.+.+ + +..+.+ ....+.|+|.+ +. ..+ .+ +.+.+ |..++++...+ +++.|||
T Consensus 122 ----~~v~~~~--~-l~~~~~----~~~~~~Hs~~~-~~------~~~-~v-a~s~~~g~~~~~~~~~~-~i~gvQf 177 (200)
T 1ka9_H 122 ----NALEFGG--A-FAPLTG----RHFYFANSYYG-PL------TPY-SL-GKGEYEGTPFTALLAKE-NLLAPQF 177 (200)
T ss_dssp ----EECEECG--G-GGGGTT----CEEEEEESEEC-CC------CTT-CC-EEEEETTEEEEEEEECS-SEEEESS
T ss_pred ----EEEEech--h-hhcCCC----CCEEEeccccc-CC------CCC-cE-EEEEeCCeEEEEEEeeC-CEEEEec
Confidence 3444433 2 333321 12247799988 42 123 45 77766 53467777766 9999998
No 31
>1q7r_A Predicted amidotransferase; structural genomics, YAAE, PDX2, predicted glutamine amidotransferase, PSI; HET: MSE; 1.90A {Geobacillus stearothermophilus} SCOP: c.23.16.1
Probab=99.44 E-value=1.7e-13 Score=132.61 Aligned_cols=163 Identities=13% Similarity=0.131 Sum_probs=101.6
Q ss_pred CCeEEEEEeccCCCcchHHHHHHHHHHcCCceeEEeeeEEeeCCCccccccCCChhhhhHHHHhccCCCEEEECCCCCCC
Q 009814 296 EPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR 375 (524)
Q Consensus 296 ~~v~IaiVGkY~~~~day~SI~~aL~~ag~~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~l~~~DGIllpGGfG~r 375 (524)
.+++|+++. + .++|.+..++|+.+|+.+.+. +.. +.+.++|||+||||++..
T Consensus 22 ~~~~I~il~-~---~~~~~~~~~~l~~~G~~~~~~------~~~------------------~~l~~~Dglil~GG~~~~ 73 (219)
T 1q7r_A 22 SNMKIGVLG-L---QGAVREHVRAIEACGAEAVIV------KKS------------------EQLEGLDGLVLPGGESTT 73 (219)
T ss_dssp CCCEEEEES-C---GGGCHHHHHHHHHTTCEEEEE------CSG------------------GGGTTCSEEEECCCCHHH
T ss_pred CCCEEEEEe-C---CCCcHHHHHHHHHCCCEEEEE------CCH------------------HHHhhCCEEEECCCChHH
Confidence 357899994 4 246777789999999865543 221 246689999999998753
Q ss_pred c-----hhHHHHHHHHHHHcCCCEEEEhHhHHHHHHHhccccccccCCCCcccCCCCCCCeeeeCCCCCcCCCCCccccc
Q 009814 376 G-----VQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLG 450 (524)
Q Consensus 376 g-----~eg~i~air~are~~iP~LGICLGmQll~ie~gr~v~gl~~a~S~Ef~~~~~~pVi~l~~e~~~~~~GgtmrLg 450 (524)
. ..+..+.++.+.++++|+||||+|||+|+.++|+++.. . .+. .|+..-.. ..|. +.+
T Consensus 74 ~~~~~~~~~~~~~i~~~~~~~~PilGIC~G~QlL~~~~gg~~~~--~-----lg~---~~~~~~~~-----~~g~--~~~ 136 (219)
T 1q7r_A 74 MRRLIDRYGLMEPLKQFAAAGKPMFGTCAGLILLAKRIVGYDEP--H-----LGL---MDITVERN-----SFGR--QRE 136 (219)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCEEEETTHHHHHEEEEESSCCC--C-----CCC---EEEEEECH-----HHHC--CCC
T ss_pred HHHHhhhhHHHHHHHHHHHcCCeEEEECHHHHHHHHHhCCCCcC--C-----cCc---cceEEEec-----CCCc--ccc
Confidence 1 23457889999999999999999999999999887521 1 100 01100000 0011 111
Q ss_pred ce--eeEeccCCcccccccCCcceeeeeeccccccChhhHHhhhcCCeEEEEEeCCCCeEEEEEECCCcEEEEec
Q 009814 451 SR--RTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEVWTFNYKIAVLLNY 523 (524)
Q Consensus 451 ~~--~v~l~~g~s~~~~iYg~~~~I~erhrHrYeVn~~~v~~l~~~Gl~~sg~~~dg~~VE~iE~~~hp~f~vqy 523 (524)
.+ .+.+ ++ |+ .++...+.|++.|.. + ..++++++.+ |+ .+|+++.. +++.|||
T Consensus 137 ~~~~~~~~-~g-------~g--~~~~~~~~h~~~v~~-----l-~~~~~v~a~s-dg-~~ea~~~~--~i~GvQf 191 (219)
T 1q7r_A 137 SFEAELSI-KG-------VG--DGFVGVFIRAPHIVE-----A-GDGVDVLATY-ND-RIVAARQG--QFLGCSF 191 (219)
T ss_dssp CEEEEEEE-TT-------TE--EEEEEEESSCCEEEE-----E-CTTCEEEEEE-TT-EEEEEEET--TEEEESS
T ss_pred ceecCccc-CC-------CC--CceEEEEEecceeec-----c-CCCcEEEEEc-CC-EEEEEEEC--CEEEEEE
Confidence 11 1112 11 21 123223557766532 2 3578999988 55 69999984 7999997
No 32
>2iss_D Glutamine amidotransferase subunit PDXT; (beta/alpha)8-barrel, alpha/beta three layer sandwich, lyase transferase; HET: 5RP; 2.90A {Thermotoga maritima}
Probab=99.43 E-value=4.3e-13 Score=128.64 Aligned_cols=89 Identities=15% Similarity=0.163 Sum_probs=64.9
Q ss_pred CCCeEEEEEeccCCCcchHHHHHHHHHHcCCceeEEeeeEEeeCCCccccccCCChhhhhHHHHhccCCCEEEECCCCCC
Q 009814 295 HEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGN 374 (524)
Q Consensus 295 ~~~v~IaiVGkY~~~~day~SI~~aL~~ag~~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~l~~~DGIllpGGfG~ 374 (524)
.++++|+++ +|. .+|.++.++|+.+|+.+.+. +.. +.+.++|||++|||+..
T Consensus 18 ~~~~~I~ii-~~~---~~~~~~~~~l~~~g~~~~~~------~~~------------------~~l~~~d~iil~GG~~~ 69 (208)
T 2iss_D 18 GSHMKIGVL-GVQ---GDVREHVEALHKLGVETLIV------KLP------------------EQLDMVDGLILPGGEST 69 (208)
T ss_dssp --CCEEEEE-CSS---SCHHHHHHHHHHTTCEEEEE------CSG------------------GGGGGCSEEEECSSCHH
T ss_pred CCCcEEEEE-ECC---CchHHHHHHHHHCCCEEEEe------CCh------------------HHHhhCCEEEECCCcHH
Confidence 456799999 572 38999999999998765432 211 23567999999998533
Q ss_pred C-c----hhHHHHHHHHHHHcCCCEEEEhHhHHHHHHHhccc
Q 009814 375 R-G----VQGKILAAKYAREHRIPYLGICLGMQVAVIEFARS 411 (524)
Q Consensus 375 r-g----~eg~i~air~are~~iP~LGICLGmQll~ie~gr~ 411 (524)
. + ..+..+.++.+.++++|+||||+|||+|+.++++.
T Consensus 70 ~~~~~~~~~~~~~~i~~~~~~g~PilGIC~G~QlL~~~~gg~ 111 (208)
T 2iss_D 70 TMIRILKEMDMDEKLVERINNGLPVFATCAGVILLAKRIKNY 111 (208)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCEEEETHHHHHHEEEEC--
T ss_pred HHHhhhhhhhHHHHHHHHHHCCCeEEEECHHHHHHHHHcCCC
Confidence 2 1 12346788999899999999999999999988875
No 33
>2nv0_A Glutamine amidotransferase subunit PDXT; 3-layer(ABA) sandwich, rossmann fold, glutaminase; 1.73A {Bacillus subtilis} SCOP: c.23.16.1 PDB: 1r9g_A 2nv2_B*
Probab=99.42 E-value=5.9e-13 Score=125.96 Aligned_cols=163 Identities=13% Similarity=0.135 Sum_probs=97.8
Q ss_pred eEEEEEeccCCCcchHHHHHHHHHHcCCceeEEeeeEEeeCCCccccccCCChhhhhHHHHhccCCCEEEECCCCCCCc-
Q 009814 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRG- 376 (524)
Q Consensus 298 v~IaiVGkY~~~~day~SI~~aL~~ag~~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~l~~~DGIllpGGfG~rg- 376 (524)
++|++++ + .++|.+..++|+.+|+.+.+. +.. +.+.++|||++|||++...
T Consensus 2 m~I~il~-~---~~~~~~~~~~l~~~g~~~~~~------~~~------------------~~l~~~d~iil~GG~~~~~~ 53 (196)
T 2nv0_A 2 LTIGVLG-L---QGAVREHIHAIEACGAAGLVV------KRP------------------EQLNEVDGLILPGGESTTMR 53 (196)
T ss_dssp CEEEEEC-S---SSCCHHHHHHHHHTTCEEEEE------CSG------------------GGGGGCSEEEECCSCHHHHH
T ss_pred cEEEEEE-c---cCCcHHHHHHHHHCCCEEEEe------CCh------------------HHHhhCCEEEECCCChhhHH
Confidence 5899994 5 347888889999999765432 221 2356789999999986541
Q ss_pred ----hhHHHHHHHHHHHcCCCEEEEhHhHHHHHHHhccccccccCCCCcccCCCCCCCeeeeCCCCCcCCCCCcccccce
Q 009814 377 ----VQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSR 452 (524)
Q Consensus 377 ----~eg~i~air~are~~iP~LGICLGmQll~ie~gr~v~gl~~a~S~Ef~~~~~~pVi~l~~e~~~~~~GgtmrLg~~ 452 (524)
..+..+.++.+.++++|+||||+|||+|+.++++++.. +.+ -.|+...+. ..|.. .+.
T Consensus 54 ~~~~~~~~~~~i~~~~~~~~pilgIC~G~q~l~~~~gg~~~~-------~lg---~~~~~~~~~-----~~g~~--~~~- 115 (196)
T 2nv0_A 54 RLIDTYQFMEPLREFAAQGKPMFGTCAGLIILAKEIAGSDNP-------HLG---LLNVVVERN-----SFGRQ--VDS- 115 (196)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCEEEETHHHHHHSBCCC----C-------CCC---CSCEEEECC-----CSCTT--TSE-
T ss_pred HHhhhHHHHHHHHHHHHCCCcEEEECHHHHHHHHHhcCCCCC-------ccc---CCceeEecc-----CCCcc--ccc-
Confidence 12347888899899999999999999999998886521 111 011111110 01111 010
Q ss_pred eeEeccCCcccccccCCcceeeeeeccccccChhhHHhhhcCCeEEEEEeCCCCeEEEEEECCCcEEEEec
Q 009814 453 RTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEVWTFNYKIAVLLNY 523 (524)
Q Consensus 453 ~v~l~~g~s~~~~iYg~~~~I~erhrHrYeVn~~~v~~l~~~Gl~~sg~~~dg~~VE~iE~~~hp~f~vqy 523 (524)
+..+ +.+.. |+ . ++...+.|++.|.. + ..++++.+.+ |+ .+|+++.. +++.+||
T Consensus 116 ---~~~~-~~~~~-~g-~-~~~~~~~h~~~v~~-----~-~~~~~v~a~~-d~-~~~a~~~~--~~~gvQf 169 (196)
T 2nv0_A 116 ---FEAD-LTIKG-LD-E-PFTGVFIRAPHILE-----A-GENVEVLSEH-NG-RIVAAKQG--QFLGCSF 169 (196)
T ss_dssp ---EEEE-ECCTT-CS-S-CEEEEEESCCEEEE-----E-CTTCEEEEEE-TT-EEEEEEET--TEEEESS
T ss_pred ---ccCC-ccccc-CC-C-ceEEEEEecceecc-----c-CCCcEEEEEE-CC-EEEEEEEC--CEEEEEE
Confidence 1111 22222 32 1 23223457776642 2 3578888887 44 58999874 7999997
No 34
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=99.22 E-value=6.5e-12 Score=137.64 Aligned_cols=179 Identities=13% Similarity=0.078 Sum_probs=102.3
Q ss_pred CeEEEEEeccCCCcchHHHHHHHHHHcCCceeEEeeeEEeeCCCccccccCCChhhhhHHHHhccCCCEEEECCCCCCCc
Q 009814 297 PVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRG 376 (524)
Q Consensus 297 ~v~IaiVGkY~~~~day~SI~~aL~~ag~~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~l~~~DGIllpGGfG~rg 376 (524)
+++|+++ +|.. ..+.++.++|+.+|+.+.+. +..+ . ..+.++|||||||| |++.
T Consensus 4 m~~I~Ii-d~~~--g~~~~~~~~l~~~G~~~~vv------~~~~--~--------------~~l~~~DglILpGg-G~~~ 57 (555)
T 1jvn_A 4 MPVVHVI-DVES--GNLQSLTNAIEHLGYEVQLV------KSPK--D--------------FNISGTSRLILPGV-GNYG 57 (555)
T ss_dssp SCEEEEE-CCSC--SCCHHHHHHHHHTTCEEEEE------SSGG--G--------------CCSTTCSCEEEEEC-SCHH
T ss_pred CCEEEEE-ECCC--CCHHHHHHHHHHCCCEEEEE------CCcc--c--------------cccccCCEEEECCC-CchH
Confidence 4689999 5862 25678999999999876653 2110 0 12668999999873 4432
Q ss_pred h-------hHHHHHHHHHHHcCCCEEEEhHhHHHHHHHh--ccccccccCCCCcccCCCCCCCeeeeCC-CCCcCCCCCc
Q 009814 377 V-------QGKILAAKYAREHRIPYLGICLGMQVAVIEF--ARSVLNLRDANSTEFDPNTKNPCVIFMP-EGSKTHMGGT 446 (524)
Q Consensus 377 ~-------eg~i~air~are~~iP~LGICLGmQll~ie~--gr~v~gl~~a~S~Ef~~~~~~pVi~l~~-e~~~~~~Ggt 446 (524)
. .+..++++.+.+.++|+||||+|||+|+.++ ++..-++.. ....|..+.. ..+.+|+||+
T Consensus 58 ~~~~~l~~~~~~~~i~~~~~~g~PiLGIC~G~QlL~~a~~egg~~~~Lg~---------lgg~v~~~~~~~~~~~~~G~~ 128 (555)
T 1jvn_A 58 HFVDNLFNRGFEKPIREYIESGKPIMGIXVGLQALFAGSVESPKSTGLNY---------IDFKLSRFDDSEKPVPEIGWN 128 (555)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCEEEEEHHHHTTEEEETTBTTCCCCCS---------EEEEEEECCTTTSCSSEEEEE
T ss_pred hHhhhhhhccHHHHHHHHHHcCCcEEEEchhhhhhhhhhhcCCCccccCC---------CCcEEEECCcCCCCCccccce
Confidence 1 2457889999899999999999999999877 111111100 0111222110 1123555654
Q ss_pred ccccceeeEeccCCcccccccCCcceeeeeeccccccChhhH-HhhhcCCeEEEEEeCCC--CeEEEEEECCCcEEEEec
Q 009814 447 MRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMI-ARLENAGLSFTGKDETS--QRMEVWTFNYKIAVLLNY 523 (524)
Q Consensus 447 mrLg~~~v~l~~g~s~~~~iYg~~~~I~erhrHrYeVn~~~v-~~l~~~Gl~~sg~~~dg--~~VE~iE~~~hp~f~vqy 523 (524)
++.+. . +++..+- ..... .+.|+|.+..... ..+-..|+.+.+.+..+ ..+|+++. .+++.|||
T Consensus 129 ------~v~~~-~-~L~~~l~-~~~~~--~~vHS~~~~~i~~~~~~L~~g~~vlA~s~~~~D~~i~ai~~--~~i~GvQF 195 (555)
T 1jvn_A 129 ------SCIPS-E-NLFFGLD-PYKRY--YFVHSFAAILNSEKKKNLENDGWKIAKAKYGSEEFIAAVNK--NNIFATQF 195 (555)
T ss_dssp ------CCCCC-T-TCCTTCC-TTSCE--EEEESEECBCCHHHHHHHHHTTCEEEEEEETTEEEEEEEEE--TTEEEESS
T ss_pred ------EEEEc-C-HHHhhCC-CCceE--EEEEEEEEEecccccccCCCCCEEEEEEcCCCCCeEEEEEe--CCEEEEEe
Confidence 22222 2 2222221 11112 3678888754210 00102356677776632 46999994 58999998
No 35
>2abw_A PDX2 protein, glutaminase; PLP-synthase, vitamin B6, malaria, transferase; HET: PG4; 1.62A {Plasmodium falciparum} SCOP: c.23.16.1 PDB: 4ads_G
Probab=99.06 E-value=1.2e-10 Score=112.87 Aligned_cols=88 Identities=15% Similarity=0.248 Sum_probs=65.9
Q ss_pred CeEEEEEeccCCCcchHHHHHHHHHHc---CCceeEEeeeEEeeCCCccccccCCChhhhhHHHHhccCCCEEEECCCCC
Q 009814 297 PVRIAMVGKYTGLSDAYLSILKALLHA---SVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFG 373 (524)
Q Consensus 297 ~v~IaiVGkY~~~~day~SI~~aL~~a---g~~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~l~~~DGIllpGGfG 373 (524)
+++|+|+. |. .++.+..++|+.+ |+.+.. ++. + +.+.++|||+||||+.
T Consensus 3 ~~~I~Il~-~~---~~~~~~~~~l~~~~~~G~~~~~------~~~-----------~-------~~l~~~dglil~GG~~ 54 (227)
T 2abw_A 3 EITIGVLS-LQ---GDFEPHINHFIKLQIPSLNIIQ------VRN-----------V-------HDLGLCDGLVIPGGES 54 (227)
T ss_dssp CEEEEEEC-TT---SCCHHHHHHHHTTCCTTEEEEE------ECS-----------H-------HHHHTCSEEEECCSCH
T ss_pred CcEEEEEe-CC---CCcHHHHHHHHHhccCCeEEEE------EcC-----------c-------cccccCCEEEECCCcH
Confidence 47899994 54 3567778999988 754332 221 1 3466799999999984
Q ss_pred CC-----ch--hHHHHHHHHHHHc-CCCEEEEhHhHHHHHHHhcccc
Q 009814 374 NR-----GV--QGKILAAKYAREH-RIPYLGICLGMQVAVIEFARSV 412 (524)
Q Consensus 374 ~r-----g~--eg~i~air~are~-~iP~LGICLGmQll~ie~gr~v 412 (524)
+. .. .+..+.++.+.+. ++|+||||+|||+|+.++++.+
T Consensus 55 ~~~~~~~~~d~~~~~~~i~~~~~~~g~PilGIC~G~QlL~~~~gg~~ 101 (227)
T 2abw_A 55 TTVRRCCAYENDTLYNALVHFIHVLKKPIWGTCAGCILLSKNVENIK 101 (227)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHTSCCCEEEETHHHHHTEEEEECCC
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHhcCCEEEEECHHHHHHHHHhcCCc
Confidence 32 11 3568889999999 9999999999999999988764
No 36
>2h2w_A Homoserine O-succinyltransferase; TM0881, (EC 2.3.1.46), HOM O-transsuccinylase, HTS, (TM0881), structural genomics; 2.52A {Thermotoga maritima}
Probab=98.56 E-value=1.1e-06 Score=90.00 Aligned_cols=129 Identities=13% Similarity=0.112 Sum_probs=78.0
Q ss_pred ccCCCEEEECCCCCC-------CchhHHHHHHHHHHHcCCCEEEEhHhHHHHHHHhcccc-ccccCCCCcccCCCCCCCe
Q 009814 360 LKGADGILVPGGFGN-------RGVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSV-LNLRDANSTEFDPNTKNPC 431 (524)
Q Consensus 360 l~~~DGIllpGGfG~-------rg~eg~i~air~are~~iP~LGICLGmQll~ie~gr~v-~gl~~a~S~Ef~~~~~~pV 431 (524)
..++||+||.|||=. +-+....+.+++++++++|+||||+|+|++.-++++-. ..++ ..|
T Consensus 109 ~~~~DglIITGsP~~~~~~ed~~yw~el~~li~~~~~~~~p~LGIC~GaQ~~l~~~~G~~k~~~~---~K~--------- 176 (312)
T 2h2w_A 109 DRKFDGFIITGAPVELLPFEEVDYWEELTEIMEWSRHNVYSTMFICWAAQAGLYYFYGIPKYELP---QKL--------- 176 (312)
T ss_dssp TCCEEEEEECCCSCTTSCGGGSTTHHHHHHHHHHHHHHEEEEEEETHHHHHHHHHHHCCCCEEEE---EEE---------
T ss_pred ccCcCEEEECCCCCCCCCCccCchHHHHHHHHHHHHHcCCcEEEECHHHHHHHHHhCCCccccCC---CCE---------
Confidence 367999999999843 23456778899999999999999999999776666522 1110 011
Q ss_pred eeeCCCCCcCCCCCcccccceeeEeccCCcccccccCCcceeeeeeccccccChhhHHhhhcCCeEEEEEeCCCCeEEEE
Q 009814 432 VIFMPEGSKTHMGGTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEVW 511 (524)
Q Consensus 432 i~l~~e~~~~~~GgtmrLg~~~v~l~~g~s~~~~iYg~~~~I~erhrHrYeVn~~~v~~l~~~Gl~~sg~~~dg~~VE~i 511 (524)
.|..+..+.+. +.+.+-.. +...--|-|.=++..+.+... .|+++-+.|..-. +.++
T Consensus 177 -----------------~Gv~~~~~~~~-~pL~~g~~--~~f~vphsr~~e~~~~~v~~~--pga~vLA~S~~~~-~q~~ 233 (312)
T 2h2w_A 177 -----------------SGVYKHRVAKD-SVLFRGHD--DFFWAPHSRYTEVKKEDIDKV--PELEILAESDEAG-VYVV 233 (312)
T ss_dssp -----------------EEEEEEEESSC-CGGGTTCC--SEEEEEEEEEEECCHHHHTTC--C-CEEEEEETTTE-EEEE
T ss_pred -----------------EEEEEEEEcCC-CccccCCC--CceEeeEEeccccCHHHccCC--CCCEEEEcCCCCc-ceEE
Confidence 12222333222 11111111 111112311123444444432 4899999887766 9999
Q ss_pred EECCCcEEEEec
Q 009814 512 TFNYKIAVLLNY 523 (524)
Q Consensus 512 E~~~hp~f~vqy 523 (524)
..++..++.||+
T Consensus 234 ~~~~~~~~~vQg 245 (312)
T 2h2w_A 234 ANKSERQIFVTG 245 (312)
T ss_dssp ECSSSSEEEECS
T ss_pred EecCCCEEEEEC
Confidence 998888999996
No 37
>2vdj_A Homoserine O-succinyltransferase; methionine biosynthesis, amino-acid biosynthesis, homoserine transacetylase, homoserine transsuccinylase; 2.00A {Bacillus cereus} PDB: 2ghr_A
Probab=98.56 E-value=9.9e-07 Score=89.79 Aligned_cols=130 Identities=15% Similarity=0.149 Sum_probs=78.8
Q ss_pred ccCCCEEEECCCCCC-------CchhHHHHHHHHHHHcCCCEEEEhHhHHHHHHHhcc-ccccccCCCCcccCCCCCCCe
Q 009814 360 LKGADGILVPGGFGN-------RGVQGKILAAKYAREHRIPYLGICLGMQVAVIEFAR-SVLNLRDANSTEFDPNTKNPC 431 (524)
Q Consensus 360 l~~~DGIllpGGfG~-------rg~eg~i~air~are~~iP~LGICLGmQll~ie~gr-~v~gl~~a~S~Ef~~~~~~pV 431 (524)
..++||+||.|||=. +-+....+.+++++++++|+||||+|+|++.-++++ ....++ ..|+
T Consensus 97 ~~~~DglIITGap~~~~~~ed~~yw~el~~li~~~~~~~~~~lgIC~GaQ~~l~~~~G~~k~~~~---~K~~-------- 165 (301)
T 2vdj_A 97 NEKFDGLIITGAPVETLSFEEVDYWEELKRIMEYSKTNVTSTLHICWGAQAGLYHHYGVQKYPLK---EKMF-------- 165 (301)
T ss_dssp TSCEEEEEECCCTTTTSCGGGSTTHHHHHHHHHHHHHHEEEEEEETHHHHHHHHHHHCCCCEEEE---EEEE--------
T ss_pred ccccCEEEECCCCCcCCCcccCchHHHHHHHHHHHHHcCCcEEEEcHHHHHHHHHhCCCccccCC---CCEE--------
Confidence 467999999999843 234567788999999999999999999996666555 221111 1111
Q ss_pred eeeCCCCCcCCCCCcccccceeeEeccCCcccccccCCcceeeeeeccccccChhhHHhhhcCCeEEEEEeCCCCeEEEE
Q 009814 432 VIFMPEGSKTHMGGTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEVW 511 (524)
Q Consensus 432 i~l~~e~~~~~~GgtmrLg~~~v~l~~g~s~~~~iYg~~~~I~erhrHrYeVn~~~v~~l~~~Gl~~sg~~~dg~~VE~i 511 (524)
|..+..+....+.+.+-. .+...--|-|.-++..+.+..+ .|+++-+.|..-. +.++
T Consensus 166 ------------------Gv~~~~~~~~~~pL~~g~--~~~f~~phsr~~~~~~~~v~~~--pga~vLA~S~~~~-~~~~ 222 (301)
T 2vdj_A 166 ------------------GVFEHEVREQHVKLLQGF--DELFFAVHSRHTEVRESDIREV--KELTLLANSEEAG-VHLV 222 (301)
T ss_dssp ------------------EEEEEEECCSSCGGGTTC--CSEEEEEEEEEEECCHHHHHTC--TTEEEEEEETTTE-EEEE
T ss_pred ------------------EEEEEEecCCCCccccCC--CCceEeeeEeccCcCHHHccCC--CCCEEEEeCCCCc-ceEE
Confidence 112222211001111111 1111112322223444555543 3899999987766 9999
Q ss_pred EECCCcEEEEec
Q 009814 512 TFNYKIAVLLNY 523 (524)
Q Consensus 512 E~~~hp~f~vqy 523 (524)
..++..++.||+
T Consensus 223 ~~~~~~~~~vQg 234 (301)
T 2vdj_A 223 IGQEGRQVFALG 234 (301)
T ss_dssp EEGGGTEEEECS
T ss_pred EecCCCEEEEEC
Confidence 998878999996
No 38
>3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A*
Probab=98.46 E-value=2.1e-06 Score=101.97 Aligned_cols=89 Identities=19% Similarity=0.248 Sum_probs=61.0
Q ss_pred CeEEEEEeccCCCcchHHHHHHHHHHcCCceeEEeeeEEeeCCCccccccCCChhhhhHHHHhccCCCEEEECCCCC--C
Q 009814 297 PVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFG--N 374 (524)
Q Consensus 297 ~v~IaiVGkY~~~~day~SI~~aL~~ag~~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~l~~~DGIllpGGfG--~ 374 (524)
+++|+|+ +|.... .-.++.+||+++|+.+.+. |+. ++.. .+ +.+.++|+|++||||. |
T Consensus 1047 ~pkVaIi-~~~G~N-~~~~~~~A~~~aG~~~~~v----~~~--dl~~-----~~-------~~l~~~d~lvlPGGfSygD 1106 (1303)
T 3ugj_A 1047 RPKVAVL-REQGVN-SHVEMAAAFHRAGFDAIDV----HMS--DLLG-----GR-------IGLGNFHALVACGGFSYGD 1106 (1303)
T ss_dssp CCEEEEE-ECTTCC-CHHHHHHHHHHTTCEEEEE----EHH--HHHT-----TS-------CCGGGCSEEEECCSCGGGG
T ss_pred CCEEEEE-ecCCcC-CHHHHHHHHHHhCCceEEE----eec--cccc-----Cc-------ccHhhCCEEEECCCCcchh
Confidence 5799999 574332 5578899999999876643 321 1100 00 2467899999999974 3
Q ss_pred C---ch---------hHHHHHHHHHH-HcCCCEEEEhHhHHHHH
Q 009814 375 R---GV---------QGKILAAKYAR-EHRIPYLGICLGMQVAV 405 (524)
Q Consensus 375 r---g~---------eg~i~air~ar-e~~iP~LGICLGmQll~ 405 (524)
- +. .++.++++.+. +.++|+||||+|||+|+
T Consensus 1107 ~l~~g~~~a~~~l~~~~l~~~l~~~~~~~g~pvLGICnG~QlL~ 1150 (1303)
T 3ugj_A 1107 VLGAGEGWAKSILFNHRVRDEFETFFHRPQTLALGVCNGCQMMS 1150 (1303)
T ss_dssp TTSTTHHHHHHHHTSHHHHHHHHHHHHSSSCEEEEETHHHHHHH
T ss_pred hhccchhHHHHHHhchhHHHHHHHHHHhCCCcEEEECHHHHHHH
Confidence 1 10 34555666643 57899999999999999
No 39
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=98.39 E-value=2.9e-07 Score=88.66 Aligned_cols=92 Identities=14% Similarity=-0.001 Sum_probs=63.9
Q ss_pred CeEEEEEeccCCC---cc-hHHHHHHHHHHcCCceeEEeeeEEeeCCCccccccCCChhhhhHHHHhccCCCEEEECCCC
Q 009814 297 PVRIAMVGKYTGL---SD-AYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGF 372 (524)
Q Consensus 297 ~v~IaiVGkY~~~---~d-ay~SI~~aL~~ag~~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~l~~~DGIllpGGf 372 (524)
..+|+++ +|..- .+ ...|+.++|+..|+++.+. +-.+- ++ .+..+.+.++|+|++|||-
T Consensus 27 ~~~i~~I-p~As~~~~~~~~~~s~~~a~~~lG~~v~~~------~i~~~-------~~---~~~~~~l~~ad~I~l~GG~ 89 (206)
T 3l4e_A 27 GKTVTFI-PTASTVEEVTFYVEAGKKALESLGLLVEEL------DIATE-------SL---GEITTKLRKNDFIYVTGGN 89 (206)
T ss_dssp TCEEEEE-CGGGGGCSCCHHHHHHHHHHHHTTCEEEEC------CTTTS-------CH---HHHHHHHHHSSEEEECCSC
T ss_pred CCEEEEE-CCCCCCCCHHHHHHHHHHHHHHcCCeEEEE------EecCC-------Ch---HHHHHHHHhCCEEEECCCC
Confidence 3689999 58632 12 4478999999999865432 11110 11 1112457899999999953
Q ss_pred CCC-----chhHHHHHHHHHHHcCCCEEEEhHhHHHHH
Q 009814 373 GNR-----GVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (524)
Q Consensus 373 G~r-----g~eg~i~air~are~~iP~LGICLGmQll~ 405 (524)
-.+ ...|..++++.+.++++|++|||.|||+|+
T Consensus 90 ~~~l~~~L~~~gl~~~l~~~~~~G~p~~G~sAGa~~l~ 127 (206)
T 3l4e_A 90 TFFLLQELKRTGADKLILEEIAAGKLYIGESAGAVITS 127 (206)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHTTCEEEEETHHHHTTS
T ss_pred HHHHHHHHHHCChHHHHHHHHHcCCeEEEECHHHHHhc
Confidence 222 125788999999999999999999999997
No 40
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=98.36 E-value=1.8e-07 Score=91.23 Aligned_cols=88 Identities=16% Similarity=0.192 Sum_probs=62.2
Q ss_pred CeEEEEEeccCC---Ccc-hHHHHHHHHHHcCCceeEEeeeEEeeCCCccccccCCChhhhhHHHHhccCCCEEEECCCC
Q 009814 297 PVRIAMVGKYTG---LSD-AYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGF 372 (524)
Q Consensus 297 ~v~IaiVGkY~~---~~d-ay~SI~~aL~~ag~~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~l~~~DGIllpGGf 372 (524)
..+|+++ +|.. ..+ ...|+.++|+..|+++... .. .+ + ..+.+.++|+|++|||-
T Consensus 31 ~~~i~iI-~~a~~~~~~~~~~~~~~~al~~lG~~~~~v------~~--~~------d------~~~~l~~ad~I~lpGG~ 89 (229)
T 1fy2_A 31 RRSAVFI-PFAGVTQTWDEYTDKTAEVLAPLGVNVTGI------HR--VA------D------PLAAIEKAEIIIVGGGN 89 (229)
T ss_dssp CCEEEEE-CTTCCSSCHHHHHHHHHHHHGGGTCEEEET------TS--SS------C------HHHHHHHCSEEEECCSC
T ss_pred CCeEEEE-ECCCCCCCHHHHHHHHHHHHHHCCCEEEEE------ec--cc------c------HHHHHhcCCEEEECCCc
Confidence 4689999 5863 122 3467899999999754432 10 00 0 12567889999999953
Q ss_pred CCC-----chhHHHHHHHHHHHcCCCEEEEhHhHHHHH
Q 009814 373 GNR-----GVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (524)
Q Consensus 373 G~r-----g~eg~i~air~are~~iP~LGICLGmQll~ 405 (524)
-.. ...|..++++.+.++++|++|||.|||+|+
T Consensus 90 ~~~~~~~l~~~gl~~~l~~~~~~G~p~~G~sAG~~~l~ 127 (229)
T 1fy2_A 90 TFQLLKESRERGLLAPMADRVKRGALYIGWSAGANLAC 127 (229)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCEEEEETHHHHHTS
T ss_pred HHHHHHHHHHCChHHHHHHHHHcCCEEEEECHHHHhhc
Confidence 322 114678899988888999999999999998
No 41
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=97.61 E-value=0.00014 Score=68.35 Aligned_cols=101 Identities=17% Similarity=0.201 Sum_probs=63.4
Q ss_pred CeEEEEEeccCCCcc-hHHHHHHHHHHcCCceeEEeeeEEeeCCC-cccc----ccCCChhhhhHHHHh--ccCCCEEEE
Q 009814 297 PVRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPACD-LEDA----TEKENPDAYKAAWKL--LKGADGILV 368 (524)
Q Consensus 297 ~v~IaiVGkY~~~~d-ay~SI~~aL~~ag~~~~v~v~i~~i~s~~-le~~----~~~~~p~~y~~~~~~--l~~~DGIll 368 (524)
..+|+++- +..+.+ ......+.|+.+|+++.+. ..+... +... .+..+. . .+. ..++|+|+|
T Consensus 23 ~~kV~ill-~~g~~~~e~~~~~~~l~~ag~~v~~v----s~~~~~~v~~~~g~~~v~~~~-~----l~~~~~~~~D~liv 92 (193)
T 1oi4_A 23 SKKIAVLI-TDEFEDSEFTSPADEFRKAGHEVITI----EKQAGKTVKGKKGEASVTIDK-S----IDEVTPAEFDALLL 92 (193)
T ss_dssp CCEEEEEC-CTTBCTHHHHHHHHHHHHTTCEEEEE----ESSTTCEEECTTSSCEEECCE-E----GGGCCGGGCSEEEE
T ss_pred CCEEEEEE-CCCCCHHHHHHHHHHHHHCCCEEEEE----ECCCCcceecCCCCeEEECCC-C----hHHCCcccCCEEEE
Confidence 45788883 544443 3566789999999776543 111110 1000 000000 0 112 246899999
Q ss_pred CCCCCCC---chhHHHHHHHHHHHcCCCEEEEhHhHHHHHHH
Q 009814 369 PGGFGNR---GVQGKILAAKYAREHRIPYLGICLGMQVAVIE 407 (524)
Q Consensus 369 pGGfG~r---g~eg~i~air~are~~iP~LGICLGmQll~ie 407 (524)
|||+|.. ..+..++.++.+.++++|++|||.|.|+|+-+
T Consensus 93 pGG~~~~~l~~~~~l~~~l~~~~~~gk~i~aIC~G~~lLa~a 134 (193)
T 1oi4_A 93 PGGHSPDYLRGDNRFVTFTRDFVNSGKPVFAICHGPQLLISA 134 (193)
T ss_dssp CCBTHHHHHTTSHHHHHHHHHHHHTTCCEEEETTTHHHHHHH
T ss_pred CCCcCHHHhhhCHHHHHHHHHHHHcCCEEEEECHHHHHHHHC
Confidence 9997643 23567889999999999999999999998843
No 42
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=97.10 E-value=0.0019 Score=58.79 Aligned_cols=99 Identities=14% Similarity=0.255 Sum_probs=61.3
Q ss_pred eEEEEEeccCCCcc-hHHHHHHHHHHcCCceeEEee-eEEeeCCC-ccccccCCChhhhhHHHHhc--cCCCEEEECCCC
Q 009814 298 VRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLV-IDWIPACD-LEDATEKENPDAYKAAWKLL--KGADGILVPGGF 372 (524)
Q Consensus 298 v~IaiVGkY~~~~d-ay~SI~~aL~~ag~~~~v~v~-i~~i~s~~-le~~~~~~~p~~y~~~~~~l--~~~DGIllpGGf 372 (524)
.+|+++- |....+ ......+.|+.+|+++.+.-. -..+.+.. +. +..+. ..+.+ ..+|.|+||||+
T Consensus 3 ~ki~il~-~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~~v~~~~g~~---i~~~~-----~~~~~~~~~~D~livpGG~ 73 (168)
T 3l18_A 3 MKVLFLS-ADGFEDLELIYPLHRIKEEGHEVYVASFQRGKITGKHGYS---VNVDL-----TFEEVDPDEFDALVLPGGK 73 (168)
T ss_dssp CEEEEEC-CTTBCHHHHHHHHHHHHHTTCEEEEEESSSEEEECTTSCE---EEECE-----EGGGCCGGGCSEEEECCBS
T ss_pred cEEEEEe-CCCccHHHHHHHHHHHHHCCCEEEEEECCCCEEecCCCcE---EeccC-----ChhHCCHhhCCEEEECCCc
Confidence 4677773 554443 244567899999877655310 00111111 00 00000 01222 358999999998
Q ss_pred CCC---chhHHHHHHHHHHHcCCCEEEEhHhHHHHH
Q 009814 373 GNR---GVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (524)
Q Consensus 373 G~r---g~eg~i~air~are~~iP~LGICLGmQll~ 405 (524)
|.. ..+..++.++.+.++++|+.+||-|.++|+
T Consensus 74 ~~~~~~~~~~l~~~l~~~~~~~k~i~aiC~G~~~La 109 (168)
T 3l18_A 74 APEIVRLNEKAVMITRRMFEDDKPVASICHGPQILI 109 (168)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTTCCEEEETTTHHHHH
T ss_pred CHHHhccCHHHHHHHHHHHHCCCEEEEECHhHHHHH
Confidence 642 335678889999999999999999999987
No 43
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=96.76 E-value=0.0047 Score=60.64 Aligned_cols=171 Identities=15% Similarity=0.157 Sum_probs=95.5
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCcc----cc
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNY----ER 76 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtmsp~~hgevfv~~dg~e~dldlg~y----er 76 (524)
+|-||||| .=++.||=++++.|.+.|+.+|++|...| | .+.|-. ..+| .|-|...+ .+
T Consensus 21 ~k~i~Itg-T~t~vGKT~vs~gL~~~L~~~G~~V~~fK--P-----------v~~g~~--~~~~--~~~D~~~~~~~~~~ 82 (242)
T 3qxc_A 21 GHMLFISA-TNTNAGKTTCARLLAQYCNACGVKTILLK--P-----------IETGVN--DAIN--HSSDAHLFLQDNRL 82 (242)
T ss_dssp CEEEEEEE-SSTTSSHHHHHHHHHHHHHHTTCCEEEEC--C-----------EECSCC--TTTC--CCSHHHHHHHHHHT
T ss_pred CcEEEEEe-CCCCCcHHHHHHHHHHHHHhCCCceEEEe--e-----------eecCCc--ccCC--CCchHHHHHHHHHH
Confidence 47899986 56999999999999999999999999988 2 222210 0001 22233333 33
Q ss_pred cc-CCCCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCcccccc-
Q 009814 77 FM-DIKLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDI- 154 (524)
Q Consensus 77 f~-~~~~~~~~n~t~g~iy~~vi~ker~g~ylg~tvqviphit~ei~~~i~~~~~~~~d~~~~~~d~~i~eiggtvgdi- 154 (524)
+. +.....-+-++--.-.+--+..++.|.+ +. ---++|++.+.+++. ++|++|||==|-+.+.
T Consensus 83 ~~~g~~~~~~~p~~~~~p~sp~~aa~~~g~~--~~-----i~~~~I~~~~~~l~~--------~~D~vlIEGagGl~~pl 147 (242)
T 3qxc_A 83 LDRSLTLKDISFYRYHKVSAPLIAQQEEDPN--AP-----IDTDNLTQRLHNFTK--------TYDLVIVEGAGGLCVPI 147 (242)
T ss_dssp TCTTCCHHHHCCEECSSSSCHHHHHHHHCTT--CC-----CCHHHHHHHHHHGGG--------TCSEEEEECCSCTTCBS
T ss_pred HhCCCChHHeeeEEECCCCChHHHHHHcCCC--Cc-----CCHHHHHHHHHHHHh--------cCCEEEEECCCCccccc
Confidence 33 2221000000000000012223334432 11 134788888888863 6899999976655542
Q ss_pred -CcchHHHHHHHhhhhcCCCCEEEEEeeeeeeecC-CCccccCCchhhHHHhhcCCCcccEEEEecC
Q 009814 155 -ESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNV-VGEQKTKPTQHSVRGLRGQGLTPNILACRST 219 (524)
Q Consensus 155 -es~pf~ea~rq~~~~~~~~n~~~ih~~~vp~~~~-~~e~ktkptq~sv~~lrs~Gi~pd~lv~R~~ 219 (524)
+..-..+-++++... ++.| ... .|- -.-+.-+++.|++.|+. .++|+-..
T Consensus 148 ~~~~~~adlA~~l~~p-----VILV-------~~~~lg~--i~~~~lt~~~l~~~g~~-~GvIlN~v 199 (242)
T 3qxc_A 148 TLEENMLDFALKLKAK-----MLLI-------SHDNLGL--INDCLLNDFLLKSHQLD-YKIAINLK 199 (242)
T ss_dssp SSSCBHHHHHHHHTCE-----EEEE-------ECCSTTH--HHHHHHHHHHHHTSSSC-EEEEECCC
T ss_pred cccchHHHHHHHcCCC-----EEEE-------EcCCCcH--HHHHHHHHHHHHhCCCC-EEEEEeCC
Confidence 333445666666533 2221 211 121 12456677888899999 89888644
No 44
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=96.67 E-value=0.0046 Score=56.92 Aligned_cols=97 Identities=15% Similarity=0.213 Sum_probs=70.2
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCccccccCC
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtmsp~~hgevfv~~dg~e~dldlg~yerf~~~ 80 (524)
||-|.|+++ -.|.||=.+|+.++..|..+|++|.++..||.-|.- .|+..
T Consensus 1 M~vi~v~s~-kgG~GKTt~a~~la~~la~~g~~vlliD~D~~~~~~-----------------------------~~~~~ 50 (206)
T 4dzz_A 1 MKVISFLNP-KGGSGKTTAVINIATALSRSGYNIAVVDTDPQMSLT-----------------------------NWSKA 50 (206)
T ss_dssp CEEEEECCS-STTSSHHHHHHHHHHHHHHTTCCEEEEECCTTCHHH-----------------------------HHHTT
T ss_pred CeEEEEEeC-CCCccHHHHHHHHHHHHHHCCCeEEEEECCCCCCHH-----------------------------HHHhc
Confidence 788889876 788999999999999999999999999999643321 01110
Q ss_pred CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccCcchHH
Q 009814 81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFI 160 (524)
Q Consensus 81 ~~~~~~n~t~g~iy~~vi~ker~g~ylg~tvqviphit~ei~~~i~~~~~~~~d~~~~~~d~~i~eiggtvgdies~pf~ 160 (524)
. .. .+.++|--.+.+.+.+..+. ..+|++||+.++..++ ...
T Consensus 51 ~---~~-----------------------~~~~~~~~~~~l~~~l~~l~--------~~yD~viiD~~~~~~~----~~~ 92 (206)
T 4dzz_A 51 G---KA-----------------------AFDVFTAASEKDVYGIRKDL--------ADYDFAIVDGAGSLSV----ITS 92 (206)
T ss_dssp S---CC-----------------------SSEEEECCSHHHHHTHHHHT--------TTSSEEEEECCSSSSH----HHH
T ss_pred C---CC-----------------------CCcEEecCcHHHHHHHHHhc--------CCCCEEEEECCCCCCH----HHH
Confidence 0 00 05566665688888888875 3699999999998854 444
Q ss_pred HHHHH
Q 009814 161 EALGQ 165 (524)
Q Consensus 161 ea~rq 165 (524)
.+++.
T Consensus 93 ~~l~~ 97 (206)
T 4dzz_A 93 AAVMV 97 (206)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 45443
No 45
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=96.30 E-value=0.0078 Score=56.30 Aligned_cols=100 Identities=13% Similarity=0.096 Sum_probs=60.9
Q ss_pred EEEEEeccCCCcc-hHHHHHHHHHHcCCceeEEeeeEEeeCC-Cccc-cccCCChhhhhHHHHhc---cCCCEEEECCCC
Q 009814 299 RIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPAC-DLED-ATEKENPDAYKAAWKLL---KGADGILVPGGF 372 (524)
Q Consensus 299 ~IaiVGkY~~~~d-ay~SI~~aL~~ag~~~~v~v~i~~i~s~-~le~-~~~~~~p~~y~~~~~~l---~~~DGIllpGGf 372 (524)
+|+++- |..+.+ ......+.|+.+++++.+. ..... .+.. ....-.|. . ..+.+ ..+|.|+||||+
T Consensus 5 ~v~ill-~~g~~~~e~~~~~~~l~~ag~~v~~v----s~~~~~~v~~~~g~~v~~d-~--~l~~~~~~~~~D~livpGG~ 76 (197)
T 2rk3_A 5 RALVIL-AKGAEEMETVIPVDVMRRAGIKVTVA----GLAGKDPVQCSRDVVICPD-A--SLEDAKKEGPYDVVVLPGGN 76 (197)
T ss_dssp EEEEEE-CTTCCHHHHHHHHHHHHHTTCEEEEE----ETTCSSCEECTTSCEECCS-E--EHHHHHTTCCCSEEEECCCH
T ss_pred EEEEEE-CCCCcHHHHHHHHHHHHHCCCEEEEE----EcCCCCccccCCCCEEeCC-c--CHHHcCCccCCCEEEECCCc
Confidence 567663 544443 2455678999999766543 11110 0110 00000010 0 11233 679999999997
Q ss_pred CCC----chhHHHHHHHHHHHcCCCEEEEhHhHHHHHH
Q 009814 373 GNR----GVQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (524)
Q Consensus 373 G~r----g~eg~i~air~are~~iP~LGICLGmQll~i 406 (524)
+.. ..+..++.++.+.++++|+.+||-|-++|+-
T Consensus 77 ~~~~~l~~~~~~~~~l~~~~~~gk~i~aiC~G~~~La~ 114 (197)
T 2rk3_A 77 LGAQNLSESAAVKEILKEQENRKGLIATICAGPTALLA 114 (197)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHTTCEEEEETTTHHHHHH
T ss_pred hhHHHhhhCHHHHHHHHHHHHcCCEEEEECHHHHHHHH
Confidence 532 2356788899999999999999999998883
No 46
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=96.29 E-value=0.0084 Score=57.96 Aligned_cols=169 Identities=15% Similarity=0.203 Sum_probs=93.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCccccccCC
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtmsp~~hgevfv~~dg~e~dldlg~yerf~~~ 80 (524)
||-||||| .-|+.||=++++.|.+.|+.+|++|...| |.++|-.+ .+|| ..|-|.-. +..+.
T Consensus 4 mk~i~Itg-t~t~vGKT~vt~~L~~~l~~~G~~V~~~K-------------Pv~~g~~~-~~~~-~~~~D~~~--~~~~~ 65 (228)
T 3of5_A 4 MKKFFIIG-TDTEVGKTYISTKLIEVCEHQNIKSLCLK-------------PVASGQSQ-FSEL-CEDVESIL--NAYKH 65 (228)
T ss_dssp CEEEEEEE-SSSSSCHHHHHHHHHHHHHHTTCCEEEEC-------------SEEESBCS-SSSS-BHHHHHHH--HHTTT
T ss_pred CcEEEEEe-CCCCCCHHHHHHHHHHHHHHCCCeeEEec-------------ceeecCcc-CCCC-CChHHHHH--HhcCC
Confidence 68899986 56999999999999999999999999966 45566322 1222 11112211 22222
Q ss_pred CCCCCCcccchHhh----HHHHhhhhcCCCCCCeeEEcccchHHHHHHHHH-HhcccCCCCCCCCcEEEEeeCccccc--
Q 009814 81 KLTRDNNITTGKIY----QSVIDKERKGDYLGKTVQVVPHITDEIQDWIER-VAMIPVDGKEGPVDVCVIELGGTIGD-- 153 (524)
Q Consensus 81 ~~~~~~n~t~g~iy----~~vi~ker~g~ylg~tvqviphit~ei~~~i~~-~~~~~~d~~~~~~d~~i~eiggtvgd-- 153 (524)
.++.+ ++ ..-.| .--+..++.|. +---++|++.+.+ ++ .++|++|||--|-+.+
T Consensus 66 ~~~~~-~~-~~~~~~~p~sp~~aa~~~~~---------~i~~~~i~~~~~~~l~--------~~~D~vlIEgaggl~~p~ 126 (228)
T 3of5_A 66 KFTAA-EI-NLISFNQAVAPHIIAAKTKV---------DISIENLKQFIEDKYN--------QDLDILFIEGAGGLLTPY 126 (228)
T ss_dssp SSCHH-HH-CSEEESSSSCHHHHHHHTTC---------CCCHHHHHHHHHGGGG--------SSCSEEEEEEEEETTCBS
T ss_pred CCChh-hE-EEEEECCCCCHHHHHHHcCC---------CCCHHHHHHHHHHHHH--------ccCCEEEEECCCcccccc
Confidence 21100 00 00001 00111122221 1123778888887 65 3789999996554443
Q ss_pred cCcchHHHHHHHhhhhcCCCCEEEEEeeeeeeecCCCccccCCchhhHHHhhcCCCcccEEEEecC
Q 009814 154 IESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRST 219 (524)
Q Consensus 154 ies~pf~ea~rq~~~~~~~~n~~~ih~~~vp~~~~~~e~ktkptq~sv~~lrs~Gi~pd~lv~R~~ 219 (524)
-+..-..+-++++... ++.| --.+ .|- -.-+..+++.++..|+..-++|+-..
T Consensus 127 ~~~~~~adla~~l~~p-----viLV-----~~~~-~~~--i~~~~~~~~~l~~~~~~i~GvIlN~~ 179 (228)
T 3of5_A 127 SDHTTQLDLIKALQIP-----VLLV-----SAIK-VGC--INHTLLTINELNRHNIKLAGWIANCN 179 (228)
T ss_dssp SSSCBHHHHHHHHTCC-----EEEE-----EECS-TTH--HHHHHHHHHHHHHTTCCEEEEEEEEC
T ss_pred ccchhHHHHHHHcCCC-----EEEE-----EcCC-cch--HHHHHHHHHHHHhCCCcEEEEEEECc
Confidence 1233345555665422 2221 1111 122 22355677778899999988887543
No 47
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=96.08 E-value=0.0049 Score=57.63 Aligned_cols=45 Identities=20% Similarity=0.161 Sum_probs=38.8
Q ss_pred cCCCEEEECCCCCCC---chhHHHHHHHHHHHcCCCEEEEhHhHHHHH
Q 009814 361 KGADGILVPGGFGNR---GVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (524)
Q Consensus 361 ~~~DGIllpGGfG~r---g~eg~i~air~are~~iP~LGICLGmQll~ 405 (524)
.++|+|++|||+|.. ..+..++.++.+.++++|+.+||-|-++|+
T Consensus 68 ~~yD~liiPGG~g~~~l~~~~~~~~~l~~~~~~~k~iaaIC~g~~~La 115 (177)
T 4hcj_A 68 VEFDAVVFVGGIGCITLWDDWRTQGLAKLFLDNQKIVAGIGSGVVIMA 115 (177)
T ss_dssp GGCSEEEECCSGGGGGGTTCHHHHHHHHHHHHTTCEEEEETTHHHHHH
T ss_pred hHCCEEEECCCccHHHHhhCHHHHHHHHHHHHhCCEEEEecccHHHHH
Confidence 568999999999864 335678899999999999999999998876
No 48
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=95.89 E-value=0.013 Score=55.39 Aligned_cols=98 Identities=15% Similarity=0.142 Sum_probs=59.8
Q ss_pred EEEEEeccCCCcc-hHHHHHHHHHHcCCceeEEee-eE---EeeCCC-ccccccCCChhhhhHHHHh--ccCCCEEEECC
Q 009814 299 RIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLV-ID---WIPACD-LEDATEKENPDAYKAAWKL--LKGADGILVPG 370 (524)
Q Consensus 299 ~IaiVGkY~~~~d-ay~SI~~aL~~ag~~~~v~v~-i~---~i~s~~-le~~~~~~~p~~y~~~~~~--l~~~DGIllpG 370 (524)
+|+++- +..+.+ ......+.|+.+|+++.+.-. -. .+.+.. +. +..+. ..+. ..++|+|+|||
T Consensus 4 kV~ill-~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~~~~~v~~~~g~~---v~~~~-----~l~~~~~~~~D~livpG 74 (205)
T 2ab0_A 4 SALVCL-APGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVK---LLADA-----PLVEVADGEYDVIVLPG 74 (205)
T ss_dssp EEEEEE-CTTCCHHHHHHHHHHHHHTTCEEEEEECSSTTCCEEECTTSCE---EECSE-----EHHHHTTSCCSEEEECC
T ss_pred EEEEEE-cCCCcHHHHHHHHHHHHHCCCEEEEEeCCCCCCceeecCCCeE---EecCC-----CHHHCCcccCCEEEECC
Confidence 566663 444432 244567899999977654310 00 111111 00 00000 0122 35799999999
Q ss_pred CCCCC----chhHHHHHHHHHHHcCCCEEEEhHhH-HHHH
Q 009814 371 GFGNR----GVQGKILAAKYAREHRIPYLGICLGM-QVAV 405 (524)
Q Consensus 371 GfG~r----g~eg~i~air~are~~iP~LGICLGm-Qll~ 405 (524)
|++.. ..+..++.++.+.++++|+.+||-|- ++|+
T Consensus 75 G~~~~~~l~~~~~l~~~l~~~~~~gk~i~aiC~G~~~lLa 114 (205)
T 2ab0_A 75 GIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLV 114 (205)
T ss_dssp CHHHHHHHHHCHHHHHHHHHHHHTTCEEEEETHHHHHHTT
T ss_pred CcccHHHhccCHHHHHHHHHHHHcCCEEEEECHhHHHHHH
Confidence 97532 23567788999999999999999999 8887
No 49
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=95.83 E-value=0.027 Score=52.31 Aligned_cols=100 Identities=13% Similarity=0.132 Sum_probs=58.7
Q ss_pred EEEEEeccCCCcc-hHHHHHHHHHHcCCceeEEeeeEEeeC-CCccc-cccCCChhhhhHHHHhc--cCCCEEEECCCCC
Q 009814 299 RIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPA-CDLED-ATEKENPDAYKAAWKLL--KGADGILVPGGFG 373 (524)
Q Consensus 299 ~IaiVGkY~~~~d-ay~SI~~aL~~ag~~~~v~v~i~~i~s-~~le~-~~~~~~p~~y~~~~~~l--~~~DGIllpGGfG 373 (524)
+|+++= +..+.+ ......+.|+.+|+++.+. ..+. ..+.. ....-.|.. ..+.+ ..+|.|+||||.+
T Consensus 7 kv~ill-~~g~~~~e~~~~~~~l~~ag~~v~~~----s~~~~~~v~~~~g~~i~~d~---~l~~~~~~~~D~livpGG~~ 78 (190)
T 4e08_A 7 SALVIL-APGAEEMEFIIAADVLRRAGIKVTVA----GLNGGEAVKCSRDVQILPDT---SLAQVASDKFDVVVLPGGLG 78 (190)
T ss_dssp EEEEEE-CTTCCHHHHHHHHHHHHHTTCEEEEE----ESSSSSCEECTTSCEEECSE---ETGGGTTCCCSEEEECCCHH
T ss_pred EEEEEE-CCCchHHHHHHHHHHHHHCCCEEEEE----ECCCCcceecCCCcEEECCC---CHHHCCcccCCEEEECCCCh
Confidence 566552 433433 3455678999999766543 1111 11110 000000000 01222 3689999999953
Q ss_pred -CC---chhHHHHHHHHHHHcCCCEEEEhHhHHHHHH
Q 009814 374 -NR---GVQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (524)
Q Consensus 374 -~r---g~eg~i~air~are~~iP~LGICLGmQll~i 406 (524)
.. ..+..++.++.+.++++|+.+||-|-++|+-
T Consensus 79 ~~~~~~~~~~~~~~l~~~~~~~k~i~aiC~G~~~La~ 115 (190)
T 4e08_A 79 GSNAMGESSLVGDLLRSQESGGGLIAAICAAPTVLAK 115 (190)
T ss_dssp HHHHHHHCHHHHHHHHHHHHTTCEEEEETTTHHHHHH
T ss_pred HHHHhhhCHHHHHHHHHHHHCCCEEEEECHHHHHHHH
Confidence 22 2346788899999999999999999998873
No 50
>3er6_A Putative transcriptional regulator protein; structural genomics, unknown function, DNA-binding, transcription regulation, PSI-2; 1.90A {Vibrio parahaemolyticus}
Probab=95.70 E-value=0.022 Score=54.04 Aligned_cols=48 Identities=6% Similarity=-0.173 Sum_probs=40.0
Q ss_pred hccCCCEEEECCCCCCC-----chhHHHHHHHHHHHcCCCEEEEhHhHHHHHH
Q 009814 359 LLKGADGILVPGGFGNR-----GVQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (524)
Q Consensus 359 ~l~~~DGIllpGGfG~r-----g~eg~i~air~are~~iP~LGICLGmQll~i 406 (524)
.+.++|.|+||||.+.. ..+..++.++.+.++++++.+||-|-.+|+-
T Consensus 71 ~~~~~D~livpGg~~~~~~~~~~~~~l~~~l~~~~~~g~~iaaIC~G~~~La~ 123 (209)
T 3er6_A 71 SFDFTNILIIGSIGDPLESLDKIDPALFDWIRELHLKGSKIVAIDTGIFVVAK 123 (209)
T ss_dssp GCSCCSEEEECCCSCHHHHGGGSCHHHHHHHHHHHHTTCEEEEETTHHHHHHH
T ss_pred ccCCCCEEEECCCCCchhhhccCCHHHHHHHHHHHhcCCEEEEEcHHHHHHHH
Confidence 45679999999998643 2457788999999999999999999988873
No 51
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=95.62 E-value=0.02 Score=56.34 Aligned_cols=167 Identities=19% Similarity=0.239 Sum_probs=90.2
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCccccccCC
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtmsp~~hgevfv~~dg~e~dldlg~yerf~~~ 80 (524)
||-||||| .=|+.||=++++.|.+.|+.+|++|...| |.+.|-. .|+ -|.....+..+.
T Consensus 26 m~~i~Itg-t~t~vGKT~vt~gL~~~l~~~G~~V~~fK-------------Pv~~g~~---~~~----~D~~~~~~~~g~ 84 (251)
T 3fgn_A 26 MTILVVTG-TGTGVGKTVVCAALASAARQAGIDVAVCK-------------PVQTGTA---RGD----DDLAEVGRLAGV 84 (251)
T ss_dssp CEEEEEEE-SSTTSCHHHHHHHHHHHHHHTTCCEEEEE-------------EEECCGG---GTC----CHHHHHHHHHCC
T ss_pred CCEEEEEe-CCCCCcHHHHHHHHHHHHHHCCCeEEEEe-------------eeecCCC---CCC----HHHHHHHHHcCC
Confidence 67888886 67999999999999999999999999988 2233310 111 222222232222
Q ss_pred CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCcccccc--Cc-c
Q 009814 81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDI--ES-M 157 (524)
Q Consensus 81 ~~~~~~n~t~g~iy~~vi~ker~g~ylg~tvqviphit~ei~~~i~~~~~~~~d~~~~~~d~~i~eiggtvgdi--es-~ 157 (524)
... .|-++--.-.+--+..++.|.. . ---++|++.+.+++ .++|++|||==|-+.|- +. .
T Consensus 85 ~~~-~~~~~~~~p~sP~~aa~~~~~~---~-----~~~~~i~~~~~~l~--------~~~D~vlIEGagGl~~pl~~~~~ 147 (251)
T 3fgn_A 85 TQL-AGLARYPQPMAPAAAAEHAGMA---L-----PARDQIVRLIADLD--------RPGRLTLVEGAGGLLVELAEPGV 147 (251)
T ss_dssp CEE-EEEEECSSSSCHHHHHHHTTCC---C-----CCHHHHHHHHHTTC--------CTTCEEEEECSSSTTCEEETTTE
T ss_pred CCC-CCCeeECCCCChHHHHHHcCCC---C-----CCHHHHHHHHHHHH--------hcCCEEEEECCCCCcCCcCcccc
Confidence 111 0000000000111122223320 0 11366788777764 47899999976555431 21 2
Q ss_pred hHHHHHHHhhhhcCCCCEEEEEeeeeeeecCCCccccCCchhhHHHhhcCCCcccEEEEec
Q 009814 158 PFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRS 218 (524)
Q Consensus 158 pf~ea~rq~~~~~~~~n~~~ih~~~vp~~~~~~e~ktkptq~sv~~lrs~Gi~pd~lv~R~ 218 (524)
-..+-++++... ++. |--.+ .|-. .-+.-+++.++..|+...++|+-.
T Consensus 148 ~~adla~~l~~p-----VIL-----V~~~~-~g~i--~~~~lt~~~l~~~g~~i~GvIlN~ 195 (251)
T 3fgn_A 148 TLRDVAVDVAAA-----ALV-----VVTAD-LGTL--NHTKLTLEALAAQQVSCAGLVIGS 195 (251)
T ss_dssp EHHHHHHHTTCE-----EEE-----EECSS-TTHH--HHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred hHHHHHHHcCCC-----EEE-----EEcCC-CccH--HHHHHHHHHHHhCCCCEEEEEEEC
Confidence 334555555432 221 11111 1222 235567777888999999999854
No 52
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=95.37 E-value=0.018 Score=53.59 Aligned_cols=44 Identities=20% Similarity=0.071 Sum_probs=36.2
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc-ccCC
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY-LNTD 46 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpy-ln~d 46 (524)
|+.|.++| .||-||-..+..|-..|+.+|++|..+|.||. .++|
T Consensus 4 ~~~i~i~G--~sGsGKTTl~~~L~~~l~~~g~~v~~ik~~~~~~diD 48 (169)
T 1xjc_A 4 MNVWQVVG--YKHSGKTTLMEKWVAAAVREGWRVGTVKHHGHGGEPA 48 (169)
T ss_dssp CCEEEEEC--CTTSSHHHHHHHHHHHHHHTTCCEEEEECCC------
T ss_pred CEEEEEEC--CCCCCHHHHHHHHHHhhHhcCCeeeEEEeCCCCcccc
Confidence 56788898 78999999999999999999999999999997 5666
No 53
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=95.36 E-value=0.0094 Score=55.15 Aligned_cols=102 Identities=21% Similarity=0.214 Sum_probs=60.7
Q ss_pred CeEEEEEeccCCCcc-hHHHHHHHHHHcCCceeEEeeeEEeeCCCccc------cccCCChhhhhHHHHhc--cCCCEEE
Q 009814 297 PVRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPACDLED------ATEKENPDAYKAAWKLL--KGADGIL 367 (524)
Q Consensus 297 ~v~IaiVGkY~~~~d-ay~SI~~aL~~ag~~~~v~v~i~~i~s~~le~------~~~~~~p~~y~~~~~~l--~~~DGIl 367 (524)
..+|+++ -|..+.+ ......+.|+.+++++.+. ......+.. ....-.+. . ..+.+ ..+|.|+
T Consensus 9 ~~~v~il-~~~g~~~~e~~~~~~~l~~ag~~v~~v----s~~~~~v~~~~~~~~~g~~v~~~-~--~~~~~~~~~~D~li 80 (190)
T 2vrn_A 9 GKKIAIL-AADGVEEIELTSPRAAIEAAGGTTELI----SLEPGEIQSMKGDIEPQEKYRVD-H--VVSEVQVSDYDGLL 80 (190)
T ss_dssp TCEEEEE-CCTTCBHHHHHHHHHHHHHTTCEEEEE----ESSSSEEEEEETTTEEEEEEECS-E--EGGGCCGGGCSEEE
T ss_pred CCEEEEE-eCCCCCHHHHHHHHHHHHHCCCEEEEE----ecCCCccccccccccCCcEEeCC-C--ChhhCChhhCCEEE
Confidence 3578888 3654443 2445678899998776543 111000100 00000000 0 01222 4689999
Q ss_pred ECCCCCCC----chhHHHHHHHHHHHcCCCEEEEhHhHHHHHH
Q 009814 368 VPGGFGNR----GVQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (524)
Q Consensus 368 lpGGfG~r----g~eg~i~air~are~~iP~LGICLGmQll~i 406 (524)
||||++.. ..+..++.++.+.++++|+.+||-|-++|+-
T Consensus 81 vpGG~~~~~~~~~~~~l~~~l~~~~~~gk~i~aiC~G~~~La~ 123 (190)
T 2vrn_A 81 LPGGTVNPDKLRLEEGAMKFVRDMYDAGKPIAAICHGPWSLSE 123 (190)
T ss_dssp ECCCTHHHHHHTTCHHHHHHHHHHHHTTCCEEEC-CTTHHHHH
T ss_pred ECCCchhHHHHhhCHHHHHHHHHHHHcCCEEEEECHhHHHHHh
Confidence 99997432 3456788999999999999999999998883
No 54
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=95.22 E-value=0.11 Score=49.66 Aligned_cols=41 Identities=29% Similarity=0.453 Sum_probs=37.2
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpy 42 (524)
+|.|.|+++ -.|.||=.+|+.|+..|..+|++|.++.+||.
T Consensus 2 ~~~I~v~s~-kgGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 42 (263)
T 1hyq_A 2 VRTITVASG-KGGTGKTTITANLGVALAQLGHDVTIVDADIT 42 (263)
T ss_dssp CEEEEEEES-SSCSCHHHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred CeEEEEECC-CCCCCHHHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 478888876 57999999999999999999999999999995
No 55
>3efe_A THIJ/PFPI family protein; structural GEN csgid, center for structural genomics of infectious disease chaperone; 2.30A {Bacillus anthracis}
Probab=95.21 E-value=0.028 Score=53.37 Aligned_cols=44 Identities=18% Similarity=0.107 Sum_probs=38.4
Q ss_pred CCCEEEECCCCCCC--chhHHHHHHHHHHHcCCCEEEEhHhHHHHH
Q 009814 362 GADGILVPGGFGNR--GVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (524)
Q Consensus 362 ~~DGIllpGGfG~r--g~eg~i~air~are~~iP~LGICLGmQll~ 405 (524)
.+|.|+||||.+.+ ..+..++.++.+.++++|+.+||-|-.+|+
T Consensus 74 ~~D~livpGG~~~~~~~~~~l~~~l~~~~~~gk~iaaiC~G~~~La 119 (212)
T 3efe_A 74 SKDLLILPGGTTWSEEIHQPILERIGQALKIGTIVAAICGATDALA 119 (212)
T ss_dssp TTCEEEECCCSCTTSGGGHHHHHHHHHHHHHTCEEEEETHHHHHHH
T ss_pred CCCEEEECCCCccccccCHHHHHHHHHHHHCCCEEEEEcHHHHHHH
Confidence 78999999998764 345678899999999999999999998877
No 56
>2fex_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; 1.70A {Agrobacterium tumefaciens} SCOP: c.23.16.2
Probab=95.15 E-value=0.0087 Score=55.54 Aligned_cols=44 Identities=20% Similarity=0.269 Sum_probs=37.1
Q ss_pred CCCEEEECCCCCCC--chhHHHHHHHHHHHcCCCEEEEhHhHHHHH
Q 009814 362 GADGILVPGGFGNR--GVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (524)
Q Consensus 362 ~~DGIllpGGfG~r--g~eg~i~air~are~~iP~LGICLGmQll~ 405 (524)
++|.|+||||.+.. ..+..+..++.+.++++|+.+||-|-++|+
T Consensus 63 ~~D~livpGG~~~~~~~~~~l~~~l~~~~~~~k~i~aiC~G~~~La 108 (188)
T 2fex_A 63 DIDALVIPGGLSWEKGTAADLGGLVKRFRDRDRLVAGICAAASALG 108 (188)
T ss_dssp TCSEEEECCBSHHHHTCCCCCHHHHHHHHHTTCEEEEETHHHHHHH
T ss_pred cCCEEEECCCCcccccccHHHHHHHHHHHHCCCEEEEECHHHHHHH
Confidence 68999999997642 234567889999999999999999999887
No 57
>3cne_A Putative protease I; structural genomics, PSI-2, MCSG, protein struct initiative, midwest center for structural genomics; HET: FMN; 1.99A {Bacteroides thetaiotaomicron vpi-5482}
Probab=95.14 E-value=0.018 Score=52.62 Aligned_cols=46 Identities=15% Similarity=0.097 Sum_probs=38.0
Q ss_pred cCCCEEEECCC--C-CCC------chhHHHHHHHHHHHcCCCEEEEhHhHHHHHH
Q 009814 361 KGADGILVPGG--F-GNR------GVQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (524)
Q Consensus 361 ~~~DGIllpGG--f-G~r------g~eg~i~air~are~~iP~LGICLGmQll~i 406 (524)
.++|.|+|||| + +.. ..+..++.++.+.++++|+.+||-|-++|+-
T Consensus 65 ~~~D~livpGG~~~~~~~~l~~~~~~~~~~~~l~~~~~~gk~i~aiC~G~~~La~ 119 (175)
T 3cne_A 65 DEFDALVFSCGDAVPVFQQYANQPYNVDLMEVIKTFGEKGKMMIGHCAGAMMFDF 119 (175)
T ss_dssp GGCSEEEEECCTTGGGGGGCTTCHHHHHHHHHHHHHHHTTCEEEEETTHHHHHHH
T ss_pred ccCCEEEECCCcCcccHHHHhhcccCHHHHHHHHHHHHCCCEEEEECHHHHHHHH
Confidence 56899999999 6 542 2345778899999999999999999998883
No 58
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=95.12 E-value=0.015 Score=56.92 Aligned_cols=48 Identities=21% Similarity=0.321 Sum_probs=39.9
Q ss_pred cCCCEEEECCCCCC---------------CchhHHHHHHHHHHHcCCCEEEEhHhHHHHHHHh
Q 009814 361 KGADGILVPGGFGN---------------RGVQGKILAAKYAREHRIPYLGICLGMQVAVIEF 408 (524)
Q Consensus 361 ~~~DGIllpGGfG~---------------rg~eg~i~air~are~~iP~LGICLGmQll~ie~ 408 (524)
.++|+|+||||+|. +..+...+.++.+.++++|+.+||-|-++|+-+-
T Consensus 106 ~~~D~livPGG~~~~~~L~~~~~~~~~~~~~~~~l~~~lr~~~~~gk~IaaIC~G~~~La~ag 168 (242)
T 3l3b_A 106 EEFDMLVIPGGYGVAKNFSNLFDEDKENDYILPEFKNAVREFYNAKKPIGAVCISPAVVVALL 168 (242)
T ss_dssp GGCSEEEECCCHHHHHHHBSTTSCC--CCCBCHHHHHHHHHHHHTTCCEEEETTHHHHHHHHH
T ss_pred ccCCEEEEcCCcchhhhhhhhhccccccccCCHHHHHHHHHHHHcCCEEEEECHHHHHHHHhC
Confidence 46899999999863 2235678899999999999999999999988553
No 59
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=95.04 E-value=0.035 Score=52.79 Aligned_cols=46 Identities=17% Similarity=0.173 Sum_probs=38.7
Q ss_pred cCCCEEEECCCCCCC-chhHHHHHHHHHHHcCCCEEEEhHhHHHHHH
Q 009814 361 KGADGILVPGGFGNR-GVQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (524)
Q Consensus 361 ~~~DGIllpGGfG~r-g~eg~i~air~are~~iP~LGICLGmQll~i 406 (524)
.++|.|+||||.|.. ..+..++.++.+.++++|+.+||-|-++|+-
T Consensus 62 ~~~D~livpGG~~~~~~~~~l~~~l~~~~~~gk~iaaiC~G~~~La~ 108 (206)
T 3f5d_A 62 ANFNLLVMIGGDSWSNDNKKLLHFVKTAFQKNIPIAAICGAVDFLAK 108 (206)
T ss_dssp SCCSEEEECCBSCCCCCCHHHHHHHHHHHHTTCCEEEETHHHHHHHH
T ss_pred cCCCEEEEcCCCChhhcCHHHHHHHHHHHHcCCEEEEECHHHHHHHH
Confidence 368999999998754 3456788899999999999999999998873
No 60
>3gra_A Transcriptional regulator, ARAC family; transcription regulator, PSI-II, structural genomics structure initiative; 2.30A {Pseudomonas putida}
Probab=94.79 E-value=0.035 Score=52.38 Aligned_cols=46 Identities=20% Similarity=0.088 Sum_probs=39.8
Q ss_pred ccCCCEEEECCCCCCC--chhHHHHHHHHHHHcCCCEEEEhHhHHHHHH
Q 009814 360 LKGADGILVPGGFGNR--GVQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (524)
Q Consensus 360 l~~~DGIllpGGfG~r--g~eg~i~air~are~~iP~LGICLGmQll~i 406 (524)
..++|.|+||||.+.+ . +..++.++.+.++++++.+||-|-.+|+-
T Consensus 69 ~~~~D~livpGG~~~~~~~-~~l~~~l~~~~~~g~~iaaIC~G~~~La~ 116 (202)
T 3gra_A 69 LKELDLLVVCGGLRTPLKY-PELDRLLNDCAAHGMALGGLWNGAWFLGR 116 (202)
T ss_dssp GTTCSEEEEECCTTCCSCC-TTHHHHHHHHHHHTCEEEEETTHHHHHHH
T ss_pred CCCCCEEEEeCCCchhhcc-HHHHHHHHHHHhhCCEEEEECHHHHHHHH
Confidence 4578999999998764 4 77888999999999999999999998873
No 61
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=94.72 E-value=0.25 Score=52.25 Aligned_cols=41 Identities=27% Similarity=0.473 Sum_probs=37.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHC-CCeeEEeeeccccc
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKAC-GLRVTCIKIDPYLN 44 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~-g~~v~~~k~dpyln 44 (524)
+.|.++| .+|.||=.+++.|+..|+.+ |++|.++..|||-+
T Consensus 101 ~vI~ivG--~~GvGKTT~a~~LA~~l~~~~G~kVllvd~D~~r~ 142 (433)
T 2xxa_A 101 AVVLMAG--LQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRP 142 (433)
T ss_dssp EEEEEEC--STTSSHHHHHHHHHHHHHHTSCCCEEEEECCCSST
T ss_pred eEEEEEC--CCCCCHHHHHHHHHHHHHHhcCCeEEEEecCCCCc
Confidence 5678885 49999999999999999999 99999999999853
No 62
>2g0t_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.67A {Thermotoga maritima} SCOP: c.37.1.10
Probab=94.66 E-value=0.018 Score=59.61 Aligned_cols=41 Identities=22% Similarity=0.144 Sum_probs=36.2
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpy 42 (524)
+|-|||||==. ++||+.++..|-+.|+.+|++|..++.-.+
T Consensus 169 ~~ri~v~GTDt-~vGKt~t~~~L~~~l~~~G~~v~~v~tgqt 209 (350)
T 2g0t_A 169 IKVVGVFGTDC-VVGKRTTAVQLWERALEKGIKAGFLATGQT 209 (350)
T ss_dssp SEEEEEEESSS-SSSHHHHHHHHHHHHHHTTCCEEEEECSHH
T ss_pred ceEEEEecCCC-CccCccHHHHHHHHHHhcCCeEEEEccCce
Confidence 36799999777 599999999999999999999999887665
No 63
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=94.58 E-value=0.23 Score=48.80 Aligned_cols=40 Identities=25% Similarity=0.329 Sum_probs=35.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpy 42 (524)
|-|.|+++ -.|.||=.+|+.|+..|..+|++|.++.+||+
T Consensus 5 kvI~v~s~-KGGvGKTT~a~nLA~~La~~G~~VlliD~D~~ 44 (286)
T 2xj4_A 5 RVIVVGNE-KGGAGKSTIAVHLVTALLYGGAKVAVIDLDLR 44 (286)
T ss_dssp EEEEECCS-SSCTTHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred eEEEEEcC-CCCCCHHHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 57777764 57899999999999999999999999999994
No 64
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=94.57 E-value=0.023 Score=54.76 Aligned_cols=47 Identities=21% Similarity=0.279 Sum_probs=39.5
Q ss_pred cCCCEEEECCCCCCC--------------chhHHHHHHHHHHHcCCCEEEEhHhHHHHHHH
Q 009814 361 KGADGILVPGGFGNR--------------GVQGKILAAKYAREHRIPYLGICLGMQVAVIE 407 (524)
Q Consensus 361 ~~~DGIllpGGfG~r--------------g~eg~i~air~are~~iP~LGICLGmQll~ie 407 (524)
.++|+|+||||+|.. ..+..++.++.+.++++|+.+||-|-++|+-+
T Consensus 89 ~~~D~livpGG~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~gk~vaaIC~G~~~La~a 149 (232)
T 1vhq_A 89 AELDALIVPGGFGAAKNLSNFASLGSECTVDRELKALAQAMHQAGKPLGFMCIAPAMLPKI 149 (232)
T ss_dssp GGCSEEEECCSTHHHHTSBCHHHHGGGCCBCHHHHHHHHHHHHTTCCEEEETTGGGGHHHH
T ss_pred ccCCEEEECCCcchHHHHhhhhccccccccCHHHHHHHHHHHHcCCEEEEECHHHHHHHHH
Confidence 468999999998751 13567889999999999999999999998855
No 65
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP}
Probab=94.46 E-value=0.075 Score=53.58 Aligned_cols=108 Identities=13% Similarity=0.079 Sum_probs=68.7
Q ss_pred HHHHHHHHhhcCCCCCeEEEEEeccCC-CcchHH-HHHHHHHHcCCc-eeEEeeeEEeeCCCccccccCCChhhhhHHHH
Q 009814 282 KEWTSRAEICDGLHEPVRIAMVGKYTG-LSDAYL-SILKALLHASVD-LRKKLVIDWIPACDLEDATEKENPDAYKAAWK 358 (524)
Q Consensus 282 ~~W~~lv~~~~~~~~~v~IaiVGkY~~-~~day~-SI~~aL~~ag~~-~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~ 358 (524)
.-|+.|++.... ...+|+++. +-. ..+.|. ...++|+..|+. +.+. +-.+.+.. .+| +..+
T Consensus 43 ~i~~~~v~lagg--~~~~I~~Ip-tAs~~~~~~~~~~~~~f~~lG~~~v~~L------~i~~r~~a---~~~----~~~~ 106 (291)
T 3en0_A 43 EILQTFWSRSGG--NDAIIGIIP-SASREPLLIGERYQTIFSDMGVKELKVL------DIRDRAQG---DDS----GYRL 106 (291)
T ss_dssp HHHHHHHHHTTG--GGCEEEEEC-TTCSSHHHHHHHHHHHHHHHCCSEEEEC------CCCSGGGG---GCH----HHHH
T ss_pred HHHHHHHHHcCC--CCCeEEEEe-CCCCChHHHHHHHHHHHHHcCCCeeEEE------EecCcccc---CCH----HHHH
Confidence 456777777653 246899994 532 223443 356788888873 3321 11111100 111 1234
Q ss_pred hccCCCEEEECCCCCCC-----chhHHHHHHHHHHHcC-CCEEEEhHhHHHHH
Q 009814 359 LLKGADGILVPGGFGNR-----GVQGKILAAKYAREHR-IPYLGICLGMQVAV 405 (524)
Q Consensus 359 ~l~~~DGIllpGGfG~r-----g~eg~i~air~are~~-iP~LGICLGmQll~ 405 (524)
.+.++|+|+++||--.+ .-.+..++++.+.+++ +|+.|.|-|.-+|+
T Consensus 107 ~l~~ad~I~v~GGnt~~l~~~l~~t~l~~~L~~~~~~G~~~~~GtSAGA~i~~ 159 (291)
T 3en0_A 107 FVEQCTGIFMTGGDQLRLCGLLADTPLMDRIRQRVHNGEISLAGTSAGAAVMG 159 (291)
T ss_dssp HHHHCSEEEECCSCHHHHHHHHTTCHHHHHHHHHHHTTSSEEEEETHHHHTTS
T ss_pred HHhcCCEEEECCCCHHHHHHHHHhCCHHHHHHHHHHCCCeEEEEeCHHHHhhh
Confidence 67899999999974332 2257889999999999 99999999998876
No 66
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=94.32 E-value=0.029 Score=53.28 Aligned_cols=45 Identities=24% Similarity=0.349 Sum_probs=38.6
Q ss_pred cCCCEEEECCCCCCC----chhHHHHHHHHHHHcCCCEEEEhHhHHHHH
Q 009814 361 KGADGILVPGGFGNR----GVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (524)
Q Consensus 361 ~~~DGIllpGGfG~r----g~eg~i~air~are~~iP~LGICLGmQll~ 405 (524)
..+|+|+||||.+.. ..+..++.++.+.++++|+.+||-|-++|+
T Consensus 88 ~~~D~livpGG~~~~~~l~~~~~l~~~l~~~~~~~k~iaaiC~G~~~La 136 (224)
T 1u9c_A 88 HGFDAIFLPGGHGTMFDFPDNETLQYVLQQFAEDGRIIAAVCHGPSGLV 136 (224)
T ss_dssp SSCSEEEECCCTTHHHHSTTCHHHHHHHHHHHHTTCEEEEETTGGGGGT
T ss_pred hhCCEEEECCCcchHHHhhcCHHHHHHHHHHHHCCCEEEEEChHHHHHH
Confidence 478999999998752 345778899999999999999999999877
No 67
>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413}
Probab=94.04 E-value=0.09 Score=54.63 Aligned_cols=101 Identities=15% Similarity=0.205 Sum_probs=61.4
Q ss_pred CeEEEEEeccCCCcch-HHHHHHHHHHcCCceeEEeeeEEeeCCC-ccc-ccc-CCChhhhhHHHHhc--cCCCEEEECC
Q 009814 297 PVRIAMVGKYTGLSDA-YLSILKALLHASVDLRKKLVIDWIPACD-LED-ATE-KENPDAYKAAWKLL--KGADGILVPG 370 (524)
Q Consensus 297 ~v~IaiVGkY~~~~da-y~SI~~aL~~ag~~~~v~v~i~~i~s~~-le~-~~~-~~~p~~y~~~~~~l--~~~DGIllpG 370 (524)
..+|+++- |..+.+. .....+.|+.+|+++.+. -..... +.. ... .-.|.. ..+.+ ..+|.|||||
T Consensus 10 mkkV~ILl-~dgf~~~El~~p~dvL~~Ag~~v~vv----S~~~g~~V~ss~G~~~i~~d~---~l~~v~~~~~DaLiVPG 81 (365)
T 3fse_A 10 KKKVAILI-EQAVEDTEFIIPCNGLKQAGFEVVVL----GSRMNEKYKGKRGRLSTQADG---TTTEAIASEFDAVVIPG 81 (365)
T ss_dssp -CEEEEEC-CTTBCHHHHHHHHHHHHHTTCEEEEE----ESSSSCCEECTTSCCEECCSE---ETTTCCGGGCSEEEECC
T ss_pred ceEEEEEE-CCCCcHHHHHHHHHHHHHCCCEEEEE----ECCCCceeecCCCceEEeCCC---CHhhCCCcCCCEEEEEC
Confidence 45788873 6555432 445678999999776553 111110 100 000 000000 01122 2589999999
Q ss_pred CCCCC---chhHHHHHHHHHHHcCCCEEEEhHhHHHHH
Q 009814 371 GFGNR---GVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (524)
Q Consensus 371 GfG~r---g~eg~i~air~are~~iP~LGICLGmQll~ 405 (524)
|+|.. ..+..+..++.+.++++|+.+||-|-.+|+
T Consensus 82 G~g~~~l~~~~~l~~~Lr~~~~~gk~IaAIC~G~~lLA 119 (365)
T 3fse_A 82 GMAPDKMRRNPNTVRFVQEAMEQGKLVAAVCHGPQVLI 119 (365)
T ss_dssp BTHHHHHTTCHHHHHHHHHHHHTTCEEEEETTTHHHHH
T ss_pred CcchhhccCCHHHHHHHHHHHHCCCEEEEECHHHHHHH
Confidence 98642 335678899999999999999999999887
No 68
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=94.00 E-value=0.42 Score=50.88 Aligned_cols=40 Identities=23% Similarity=0.377 Sum_probs=36.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpyl 43 (524)
+.|+++|- +|.||=.+++.|+..|+.+|++|.++..|||-
T Consensus 101 ~vIlivG~--~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R 140 (443)
T 3dm5_A 101 TILLMVGI--QGSGKTTTVAKLARYFQKRGYKVGVVCSDTWR 140 (443)
T ss_dssp EEEEEECC--TTSSHHHHHHHHHHHHHTTTCCEEEEECCCSS
T ss_pred eEEEEECc--CCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence 46777875 99999999999999999999999999999973
No 69
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=93.88 E-value=0.11 Score=49.01 Aligned_cols=41 Identities=15% Similarity=0.148 Sum_probs=37.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHC-CCeeEEeeeccc
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKAC-GLRVTCIKIDPY 42 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~-g~~v~~~k~dpy 42 (524)
||.|.|+++ -.|.||=.+|+.|+..|..+ |+||-++.+||.
T Consensus 4 ~~vI~v~s~-kGGvGKTt~a~~LA~~la~~~g~~VlliD~D~~ 45 (245)
T 3ea0_A 4 KRVFGFVSA-KGGDGGSCIAANFAFALSQEPDIHVLAVDISLP 45 (245)
T ss_dssp CEEEEEEES-STTSSHHHHHHHHHHHHTTSTTCCEEEEECCTT
T ss_pred CeEEEEECC-CCCcchHHHHHHHHHHHHhCcCCCEEEEECCCC
Confidence 578888876 58999999999999999999 999999999997
No 70
>3noq_A THIJ/PFPI family protein; DJ-1 superfamily, isocyanide hydratase, isonitrIle hydratase; HET: NHE; 1.00A {Pseudomonas fluorescens} PDB: 3noo_A 3non_A 3nor_A* 3nov_A
Probab=93.77 E-value=0.048 Score=52.68 Aligned_cols=46 Identities=17% Similarity=0.106 Sum_probs=39.1
Q ss_pred ccCCCEEEECCCCCCC---chhHHHHHHHHHHHcCCCEEEEhHhHHHHH
Q 009814 360 LKGADGILVPGGFGNR---GVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (524)
Q Consensus 360 l~~~DGIllpGGfG~r---g~eg~i~air~are~~iP~LGICLGmQll~ 405 (524)
+..+|.|+||||+|.. ..+..+..++.+.++++++.+||-|-.+|+
T Consensus 63 ~~~~D~livpGG~g~~~~~~~~~l~~~lr~~~~~g~~v~aiC~G~~~La 111 (231)
T 3noq_A 63 CPPLDVICIPGGTGVGALMEDPQALAFIRQQAARARYVTSVSTGSLVLG 111 (231)
T ss_dssp CCCCSEEEECCSTTHHHHTTCHHHHHHHHHHHTTCSEEEEETTHHHHHH
T ss_pred CCcCCEEEECCCCChhhhccCHHHHHHHHHHHhcCCEEEEECHHHHHHH
Confidence 4578999999998763 335678899999999999999999998877
No 71
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=93.63 E-value=0.7 Score=48.98 Aligned_cols=39 Identities=28% Similarity=0.456 Sum_probs=35.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpy 42 (524)
+.|+++|. +|.||=.+++.|+.+|+.+|.+|.++-.|+|
T Consensus 98 ~vI~lvG~--~GsGKTTt~~kLA~~l~~~G~kVllv~~D~~ 136 (433)
T 3kl4_A 98 FIIMLVGV--QGSGKTTTAGKLAYFYKKRGYKVGLVAADVY 136 (433)
T ss_dssp EEEEECCC--TTSCHHHHHHHHHHHHHHTTCCEEEEEECCS
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHHHcCCeEEEEecCcc
Confidence 56788875 8999999999999999999999999999976
No 72
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=93.60 E-value=0.18 Score=47.25 Aligned_cols=39 Identities=26% Similarity=0.370 Sum_probs=35.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpy 42 (524)
|| |.|+| -.|.||=.+|+.++..|..+|+||-++.+||-
T Consensus 1 mk-I~vs~--kGGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 39 (254)
T 3kjh_A 1 MK-LAVAG--KGGVGKTTVAAGLIKIMASDYDKIYAVDGDPD 39 (254)
T ss_dssp CE-EEEEC--SSSHHHHHHHHHHHHHHTTTCSCEEEEEECTT
T ss_pred CE-EEEec--CCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 67 55564 89999999999999999999999999999994
No 73
>3ej6_A Catalase-3; heme, hydrogen iron, metal-binding, oxidoreductase, peroxidase; HET: NAG HEM; 2.30A {Neurospora crassa}
Probab=93.26 E-value=0.33 Score=54.24 Aligned_cols=95 Identities=11% Similarity=0.042 Sum_probs=61.4
Q ss_pred eEEEEEeccCCCcc-hHHHHHHHHHHcCCceeEEeeeEEeeCCCccccccCCChhhhhHHHHhccCCCEEEECCCCCC--
Q 009814 298 VRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGN-- 374 (524)
Q Consensus 298 v~IaiVGkY~~~~d-ay~SI~~aL~~ag~~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~l~~~DGIllpGGfG~-- 374 (524)
.+|||+-.-+...+ ....+.++|+.+|+.+.+. ..+. .. .... .|.+ .....+|+|+||||...
T Consensus 538 rKVaILvadG~fE~~El~~p~~aL~~aGa~V~vV------sp~~-g~-GvD~---t~~~--~~s~~fDAVvlPGG~~~~~ 604 (688)
T 3ej6_A 538 LRVGVLSTTKGGSLDKAKALKEQLEKDGLKVTVI------AEYL-AS-GVDQ---TYSA--ADATAFDAVVVAEGAERVF 604 (688)
T ss_dssp CEEEEECCSSSSHHHHHHHHHHHHHHTTCEEEEE------ESSC-CT-TCCE---ETTT--CCGGGCSEEEECTTCCTTT
T ss_pred CEEEEEccCCCccHHHHHHHHHHHHHCCCEEEEE------eCCC-CC-Cccc---Cccc--CChhcCcEEEECCCccccc
Confidence 47877732221222 4577889999999988775 2111 00 0000 0000 01246899999999632
Q ss_pred ---------CchhHHHHHHHHHHHcCCCEEEEhHhHHHHH
Q 009814 375 ---------RGVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (524)
Q Consensus 375 ---------rg~eg~i~air~are~~iP~LGICLGmQll~ 405 (524)
+.....+..++.+-++++|+..||-|-|+|.
T Consensus 605 ~~~~~~d~Lr~~~~a~~fV~e~~~hgKpIAAIchgp~lL~ 644 (688)
T 3ej6_A 605 SGKGAMSPLFPAGRPSQILTDGYRWGKPVAAVGSAKKALQ 644 (688)
T ss_dssp STTTTCCTTSCTTHHHHHHHHHHHTTCCEEEEGGGHHHHH
T ss_pred ccccchhhhccCHHHHHHHHHHHHcCCEEEEeCccHHHHH
Confidence 2335678899999999999999999999998
No 74
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=93.24 E-value=0.033 Score=53.99 Aligned_cols=45 Identities=11% Similarity=0.046 Sum_probs=37.9
Q ss_pred cCCCEEEECCCCCCC----chhHHHHHHHHHHHcCCCEEEEhHhHHHHH
Q 009814 361 KGADGILVPGGFGNR----GVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (524)
Q Consensus 361 ~~~DGIllpGGfG~r----g~eg~i~air~are~~iP~LGICLGmQll~ 405 (524)
.++|+||||||.|.. ..+...+.++.+.++++|+.+||-|-++|+
T Consensus 97 ~~~D~livpGG~~~~~~l~~~~~l~~~l~~~~~~gk~vaaIC~G~~~La 145 (243)
T 1rw7_A 97 DDYQIFFASAGHGTLFDYPKAKDLQDIASEIYANGGVVAAVCHGPAIFD 145 (243)
T ss_dssp GGEEEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGT
T ss_pred hhCcEEEECCCCCchhhcccCHHHHHHHHHHHHcCCEEEEECCCHHHHH
Confidence 368999999998842 345678899999999999999999998766
No 75
>3ttv_A Catalase HPII; heme orientation, oxidoreductase; HET: HEM; 1.45A {Escherichia coli} PDB: 3ttt_A* 1gge_A* 1iph_A* 4ens_A* 3ttu_A* 3p9p_A* 4enq_A* 1p81_A* 3ttx_A* 4enw_A* 3ttw_A* 4ent_A* 1qws_A* 1cf9_A* 1p80_A* 1qf7_A* 4enu_A* 4enp_A* 1gg9_A* 1ggf_A* ...
Probab=93.23 E-value=0.1 Score=58.89 Aligned_cols=99 Identities=17% Similarity=0.082 Sum_probs=61.2
Q ss_pred eEEEEEeccCCCcc-hHHHHHHHHHHcCCceeEEe-eeEEeeCCCccccccCCChhhhhHHHHh--ccCCCEEEECCCCC
Q 009814 298 VRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKL-VIDWIPACDLEDATEKENPDAYKAAWKL--LKGADGILVPGGFG 373 (524)
Q Consensus 298 v~IaiVGkY~~~~d-ay~SI~~aL~~ag~~~~v~v-~i~~i~s~~le~~~~~~~p~~y~~~~~~--l~~~DGIllpGGfG 373 (524)
.+|+|+- ...+.+ ...++.++|+.+|+.+.+.- ..-.|.+.. ...+..+- .+ +. ...+|+|+|||| |
T Consensus 601 rKVaILl-aDGfEe~El~~pvdaLr~AG~~V~vVS~~~g~V~gs~--G~~V~aD~-t~----~~v~s~~fDALVVPGG-g 671 (753)
T 3ttv_A 601 RVVAILL-NDEVRSADLLAILKALKAKGVHAKLLYSRMGEVTADD--GTVLPIAA-TF----AGAPSLTVDAVIVPCG-N 671 (753)
T ss_dssp CEEEEEC-CTTCCHHHHHHHHHHHHHHTCEEEEEESSSSEEECTT--SCEEECCE-ET----TTSCGGGCSEEEECCS-C
T ss_pred CEEEEEe-cCCCCHHHHHHHHHHHHHCCCEEEEEEcCCCeEEeCC--CCEEeccc-ch----hhCCCcCCCEEEECCC-C
Confidence 4777763 333333 46778999999998766530 000111110 00000000 00 11 134899999999 6
Q ss_pred CC---chhHHHHHHHHHHHcCCCEEEEhHhHHHHH
Q 009814 374 NR---GVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (524)
Q Consensus 374 ~r---g~eg~i~air~are~~iP~LGICLGmQll~ 405 (524)
.. .....+..++.+.++++|+-+||-|-++|+
T Consensus 672 ~~~Lr~d~~vl~~Vre~~~~gKpIAAIC~Gp~lLa 706 (753)
T 3ttv_A 672 IADIADNGDANYYLMEAYKHLKPIALAGDARKFKA 706 (753)
T ss_dssp GGGTTTCHHHHHHHHHHHHTTCCEEEEGGGGGGGG
T ss_pred hHHhhhCHHHHHHHHHHHhcCCeEEEECchHHHHH
Confidence 53 345688899999999999999999999887
No 76
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=92.89 E-value=0.05 Score=53.42 Aligned_cols=45 Identities=16% Similarity=0.093 Sum_probs=38.4
Q ss_pred cCCCEEEECCCCCC----CchhHHHHHHHHHHHcCCCEEEEhHhHHHHH
Q 009814 361 KGADGILVPGGFGN----RGVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (524)
Q Consensus 361 ~~~DGIllpGGfG~----rg~eg~i~air~are~~iP~LGICLGmQll~ 405 (524)
.++|+|+||||.|. +..+...+.++.+.++++|+.+||-|-++|+
T Consensus 104 ~~yD~l~ipGG~g~~~~l~~~~~l~~~l~~~~~~gk~iaaIC~Gp~~La 152 (247)
T 3n7t_A 104 HDYGLMFVCGGHGALYDFPHAKHLQNIAQDIYKRGGVIGAVCHGPAMLP 152 (247)
T ss_dssp GGCSEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGG
T ss_pred hhCCEEEEeCCCchhhhcccCHHHHHHHHHHHHcCCEEEEEChHHHHHH
Confidence 46899999999985 2345678899999999999999999998876
No 77
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=92.86 E-value=0.07 Score=55.23 Aligned_cols=46 Identities=22% Similarity=0.322 Sum_probs=38.9
Q ss_pred cCCCEEEECCCCCCC---chhHHHHHHHHHHHcCCCEEEEhHhHHHHHH
Q 009814 361 KGADGILVPGGFGNR---GVQGKILAAKYAREHRIPYLGICLGMQVAVI 406 (524)
Q Consensus 361 ~~~DGIllpGGfG~r---g~eg~i~air~are~~iP~LGICLGmQll~i 406 (524)
..+|.|+||||+|.. ..+..+..++.+.++++|+.+||-|-++|+-
T Consensus 281 ~~~D~livpGg~~~~~~~~~~~~~~~l~~~~~~~~~i~aiC~g~~~La~ 329 (396)
T 3uk7_A 281 SSYDALVIPGGRAPEYLALNEHVLNIVKEFMNSEKPVASICHGQQILAA 329 (396)
T ss_dssp GGCSEEEECCBSHHHHHTTCHHHHHHHHHHHHTTCCEEEEGGGHHHHHH
T ss_pred ccCCEEEECCCcchhhhccCHHHHHHHHHHHHCCCEEEEEchHHHHHHH
Confidence 478999999998743 3356788999999999999999999998873
No 78
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=92.64 E-value=0.055 Score=52.95 Aligned_cols=45 Identities=13% Similarity=0.049 Sum_probs=38.5
Q ss_pred cCCCEEEECCCCCC----CchhHHHHHHHHHHHcCCCEEEEhHhHHHHH
Q 009814 361 KGADGILVPGGFGN----RGVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (524)
Q Consensus 361 ~~~DGIllpGGfG~----rg~eg~i~air~are~~iP~LGICLGmQll~ 405 (524)
.++|+|+||||.|. +..+...+.++.+.++++|+.+||-|-.+|+
T Consensus 97 ~~yD~l~vpGG~~~~~~l~~~~~l~~~l~~~~~~gk~iaaIC~G~~~La 145 (244)
T 3kkl_A 97 SDYKVFFASAGHGALFDYPKAKNLQDIASKIYANGGVIAAICHGPLLFD 145 (244)
T ss_dssp GGCSEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGT
T ss_pred hhCCEEEEcCCCchhhhcccCHHHHHHHHHHHHcCCEEEEECHHHHHHH
Confidence 46899999999875 2346778899999999999999999998876
No 79
>3mgk_A Intracellular protease/amidase related enzyme (THIJ family); amidotranferase-like, structural genomics, PSI; 2.00A {Clostridium acetobutylicum}
Probab=92.39 E-value=0.056 Score=51.39 Aligned_cols=45 Identities=20% Similarity=0.262 Sum_probs=37.7
Q ss_pred cCCCEEEECCCCCCC---chhHHHHHHHHHHHcCCCEEEEhHhHHHHH
Q 009814 361 KGADGILVPGGFGNR---GVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (524)
Q Consensus 361 ~~~DGIllpGGfG~r---g~eg~i~air~are~~iP~LGICLGmQll~ 405 (524)
..+|.|+||||+|.. ..+..+..++.+.++++|+.+||-|-.+|+
T Consensus 64 ~~~D~livpGG~~~~~~~~~~~~~~~l~~~~~~~k~iaaiC~G~~~La 111 (211)
T 3mgk_A 64 NIEKILFVPGGSGTREKVNDDNFINFIGNMVKESKYIISVCTGSALLS 111 (211)
T ss_dssp SSEEEEEECCSTHHHHHTTCHHHHHHHHHHHHHCSEEEECTTHHHHHH
T ss_pred CCCCEEEECCCcchhhhcCCHHHHHHHHHHHHcCCEEEEEchHHHHHH
Confidence 347999999998753 235678889999999999999999998877
No 80
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=92.23 E-value=0.19 Score=49.51 Aligned_cols=43 Identities=33% Similarity=0.451 Sum_probs=39.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccC
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNT 45 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpyln~ 45 (524)
+|.|.|+ | -.|.||=.+|+.|+..|..+|++|-++.+||.-|.
T Consensus 41 ~~vI~v~-~-KGGvGKTT~a~nLA~~La~~G~~VlliD~D~~~~~ 83 (307)
T 3end_A 41 AKVFAVY-G-KGGIGKSTTSSNLSAAFSILGKRVLQIGCDPKHDS 83 (307)
T ss_dssp CEEEEEE-C-STTSSHHHHHHHHHHHHHHTTCCEEEEEESSSCCT
T ss_pred ceEEEEE-C-CCCccHHHHHHHHHHHHHHCCCeEEEEeCCCCCCH
Confidence 5789999 7 99999999999999999999999999999996443
No 81
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=91.83 E-value=0.1 Score=54.00 Aligned_cols=47 Identities=21% Similarity=0.333 Sum_probs=39.2
Q ss_pred cCCCEEEECCCCCCC---chhHHHHHHHHHHHcCCCEEEEhHhHHHHHHH
Q 009814 361 KGADGILVPGGFGNR---GVQGKILAAKYAREHRIPYLGICLGMQVAVIE 407 (524)
Q Consensus 361 ~~~DGIllpGGfG~r---g~eg~i~air~are~~iP~LGICLGmQll~ie 407 (524)
..+|.|+||||.|.. ..+..+..++.+.++++|+.+||-|-++|+-+
T Consensus 88 ~~~D~livpGG~~~~~~~~~~~~~~~l~~~~~~~~~i~aiC~G~~~La~a 137 (396)
T 3uk7_A 88 SKYDGLVIPGGRAPEYLALTASVVELVKEFSRSGKPIASICHGQLILAAA 137 (396)
T ss_dssp GGCSEEEECCBSHHHHHTTCHHHHHHHHHHHHTTCCEEEETTTHHHHHHT
T ss_pred ccCCEEEECCCcchhhcccCHHHHHHHHHHHHcCCEEEEECchHHHHHhc
Confidence 568999999998742 23567889999999999999999999988743
No 82
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=91.80 E-value=0.054 Score=51.17 Aligned_cols=99 Identities=15% Similarity=0.152 Sum_probs=60.1
Q ss_pred eEEEEEeccCCCcc-hHHHHHHHHHHcCCceeEEeee--EEeeCCC-ccccccCCChhhhhHHHHhc--cCCCEEEECCC
Q 009814 298 VRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVI--DWIPACD-LEDATEKENPDAYKAAWKLL--KGADGILVPGG 371 (524)
Q Consensus 298 v~IaiVGkY~~~~d-ay~SI~~aL~~ag~~~~v~v~i--~~i~s~~-le~~~~~~~p~~y~~~~~~l--~~~DGIllpGG 371 (524)
.+|+++- +..+.+ ......+.|+.+|+++.+.-.- ..+.+.. +. +..+. ..+.+ ..+|.|+||||
T Consensus 10 ~~v~ill-~~g~~~~e~~~~~~~l~~ag~~v~~vs~~g~~~v~~~~G~~---v~~d~-----~l~~~~~~~~D~livpGG 80 (208)
T 3ot1_A 10 KRILVPV-AHGSEEMETVIIVDTLVRAGFQVTMAAVGDKLQVQGSRGVW---LTAEQ-----TLEACSAEAFDALALPGG 80 (208)
T ss_dssp CEEEEEE-CTTCCHHHHHHHHHHHHHTTCEEEEEESSSCSEEECTTSCE---EECSE-----EGGGCCGGGCSEEEECCC
T ss_pred CeEEEEE-CCCCcHHHHHHHHHHHHHCCCEEEEEEcCCCcceecCCCcE---EeCCC-----CHHHCCCcCCCEEEECCC
Confidence 4677773 544443 3455678999999776553100 0111110 00 00000 01222 46899999999
Q ss_pred CCCC----chhHHHHHHHHHHHcCCCEEEEhHhH-HHHH
Q 009814 372 FGNR----GVQGKILAAKYAREHRIPYLGICLGM-QVAV 405 (524)
Q Consensus 372 fG~r----g~eg~i~air~are~~iP~LGICLGm-Qll~ 405 (524)
.+.. ..+..++.++.+.++++|+.+||-|- .+|+
T Consensus 81 ~~~~~~l~~~~~l~~~l~~~~~~gk~i~aiC~G~a~~La 119 (208)
T 3ot1_A 81 VGGAQAFADSTALLALIDAFSQQGKLVAAICATPALVFA 119 (208)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHTTCEEEEETTHHHHTTT
T ss_pred chHHHHHhhCHHHHHHHHHHHHcCCEEEEEChhHHHHHH
Confidence 7532 33567889999999999999999998 7776
No 83
>1n57_A Chaperone HSP31, protein YEDU; alpha-beta sandwich; 1.60A {Escherichia coli} SCOP: c.23.16.2 PDB: 1pv2_A 1izy_A 1ons_A 1izz_A
Probab=91.32 E-value=0.073 Score=53.35 Aligned_cols=46 Identities=26% Similarity=0.385 Sum_probs=38.5
Q ss_pred ccCCCEEEECCCCCCC-c---hhHHHHHHHHHHHcCCCEEEEhHhHHHHH
Q 009814 360 LKGADGILVPGGFGNR-G---VQGKILAAKYAREHRIPYLGICLGMQVAV 405 (524)
Q Consensus 360 l~~~DGIllpGGfG~r-g---~eg~i~air~are~~iP~LGICLGmQll~ 405 (524)
..++|+||||||.|.. . .+...+.++.+.++++|+.+||-|-.+|+
T Consensus 143 ~~~yD~livPGG~g~~~~l~~~~~l~~~l~~~~~~gk~VaaIC~Gp~~La 192 (291)
T 1n57_A 143 DSEYAAIFVPGGHGALIGLPESQDVAAALQWAIKNDRFVISLCHGPAAFL 192 (291)
T ss_dssp TCSEEEEEECCSGGGGSSGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGG
T ss_pred cccCCEEEecCCcchhhhhhhCHHHHHHHHHHHHcCCEEEEECccHHHHH
Confidence 3578999999998764 2 35678899999999999999999998655
No 84
>3ewn_A THIJ/PFPI family protein; monomer, PSI nysgrc, structural genomics, protein structure initiative; 1.65A {Pseudomonas syringae PV}
Probab=91.30 E-value=0.11 Score=50.95 Aligned_cols=44 Identities=14% Similarity=0.171 Sum_probs=37.1
Q ss_pred CCCEEEECCCC-CCC---chhHHHHHHHHHHHcCCCEEEEhHhHHHHH
Q 009814 362 GADGILVPGGF-GNR---GVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (524)
Q Consensus 362 ~~DGIllpGGf-G~r---g~eg~i~air~are~~iP~LGICLGmQll~ 405 (524)
.+|.||||||. |.. ..+..+..++.+.++++++.+||-|-.+|+
T Consensus 84 ~yD~liVPGG~~g~~~l~~~~~l~~~Lr~~~~~gk~IaaICtG~~lLa 131 (253)
T 3ewn_A 84 DLTVLFAPGGTDGTLAAASDAETLAFMADRGARAKYITSVCSGSLILG 131 (253)
T ss_dssp SCSEEEECCBSHHHHHHTTCHHHHHHHHHHHTTCSEEEEETTHHHHHH
T ss_pred CCCEEEECCCccchhhhccCHHHHHHHHHHHHcCCEEEEEChHHHHHH
Confidence 45999999998 643 345678899999999999999999998877
No 85
>2ffh_A Protein (FFH); SRP54, signal recognition particle, GTPase, M domain, RNA-binding, signal sequence-binding, helix-turn-helix, protein targeting; 3.20A {Thermus aquaticus} SCOP: a.24.13.1 a.36.1.1 c.37.1.10 PDB: 2iy3_A
Probab=90.52 E-value=2.1 Score=45.18 Aligned_cols=40 Identities=25% Similarity=0.361 Sum_probs=35.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpyl 43 (524)
+.|.++| .+|-||=.+++.|+.+|+.+|.+|.++..|+|-
T Consensus 99 ~vi~i~G--~~GsGKTT~~~~LA~~l~~~g~~Vllvd~D~~r 138 (425)
T 2ffh_A 99 NLWFLVG--LQGSGKTTTAAKLALYYKGKGRRPLLVAADTQR 138 (425)
T ss_dssp EEEEEEC--CTTSSHHHHHHHHHHHHHTTTCCEEEEECCSSC
T ss_pred eEEEEEC--CCCCCHHHHHHHHHHHHHHcCCeEEEeeccccC
Confidence 4677775 399999999999999999999999999999873
No 86
>2iuf_A Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Penicillium janthinellum} PDB: 2xf2_A*
Probab=90.51 E-value=0.53 Score=52.66 Aligned_cols=95 Identities=14% Similarity=0.075 Sum_probs=60.9
Q ss_pred eEEEEEec--cCCCcchHHHHHHHHHHcCCceeEEeeeEEeeCCCccccccCCChhhhhHHHHhccCCCEEEECCCC-C-
Q 009814 298 VRIAMVGK--YTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGF-G- 373 (524)
Q Consensus 298 v~IaiVGk--Y~~~~day~SI~~aL~~ag~~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~l~~~DGIllpGGf-G- 373 (524)
.+|+++-. -+--......+..+|+.+|+.+.+. ....-+..+. .|.+ .....+|+|+||||. |
T Consensus 530 ~kVaIL~a~~dGfe~~E~~~~~~~L~~aG~~V~vV------s~~~g~~vD~-----t~~~--~~s~~fDAVvlPGG~~g~ 596 (688)
T 2iuf_A 530 LKVGLLASVNKPASIAQGAKLQVALSSVGVDVVVV------AERXANNVDE-----TYSA--SDAVQFDAVVVADGAEGL 596 (688)
T ss_dssp CEEEEECCTTCHHHHHHHHHHHHHHGGGTCEEEEE------ESSCCTTCCE-----ESTT--CCGGGCSEEEECTTCGGG
T ss_pred CEEEEEecCCCCCcHHHHHHHHHHHHHCCCEEEEE------eccCCccccc-----chhc--CCccccCeEEecCCCccc
Confidence 47888742 1111124577889999999988775 1111000000 0100 013468999999994 4
Q ss_pred ---------------C---CchhHHHHHHHHHHHcCCCEEEEhHhHHHHH
Q 009814 374 ---------------N---RGVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (524)
Q Consensus 374 ---------------~---rg~eg~i~air~are~~iP~LGICLGmQll~ 405 (524)
. +.....++.++.+-+.++|+-.||-|-++|.
T Consensus 597 ~~~~~~~~~~~~~~~~~~L~~~~~~~~~v~~~~~~gKpIaAIc~ap~vL~ 646 (688)
T 2iuf_A 597 FGADSFTVEPSAGSGASTLYPAGRPLNILLDAFRFGKTVGALGSGSDALE 646 (688)
T ss_dssp CCTTTTTCCCCTTSCCCSSSCTTHHHHHHHHHHHHTCEEEEEGGGHHHHH
T ss_pred ccccccccccccccchhhcccChHHHHHHHHHHHcCCEEEEECchHHHHH
Confidence 1 1335678899999999999999999999876
No 87
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=90.44 E-value=0.36 Score=45.79 Aligned_cols=40 Identities=25% Similarity=0.420 Sum_probs=37.0
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dp 41 (524)
+|.|.|+++ -.|.||=.+|+.++..|..+|++|-++.+||
T Consensus 2 ~~vi~v~s~-kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 2 ARIIVVTSG-KGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp CEEEEEECS-STTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CeEEEEECC-CCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 478888886 5899999999999999999999999999999
No 88
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=90.36 E-value=0.38 Score=45.06 Aligned_cols=41 Identities=22% Similarity=0.327 Sum_probs=37.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpy 42 (524)
+|.|.|+++ -.|.||=.+|+.++..|..+|+||-.+.+||.
T Consensus 2 ~~~i~v~s~-kgGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 42 (237)
T 1g3q_A 2 GRIISIVSG-KGGTGKTTVTANLSVALGDRGRKVLAVDGDLT 42 (237)
T ss_dssp CEEEEEECS-STTSSHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred ceEEEEecC-CCCCCHHHHHHHHHHHHHhcCCeEEEEeCCCC
Confidence 488889885 57999999999999999999999999999994
No 89
>4gdh_A DJ-1, uncharacterized protein C22E12.03C; unknown function, cysteine oxidation; 1.05A {Schizosaccharomyces pombe} PDB: 4ge3_A 4ge0_A
Probab=90.05 E-value=0.35 Score=45.16 Aligned_cols=44 Identities=20% Similarity=0.053 Sum_probs=31.4
Q ss_pred ccCCCEEEECCCCCC-C---chhHHHHHHHHHHH-cCCCEEEEhHhHHH
Q 009814 360 LKGADGILVPGGFGN-R---GVQGKILAAKYARE-HRIPYLGICLGMQV 403 (524)
Q Consensus 360 l~~~DGIllpGGfG~-r---g~eg~i~air~are-~~iP~LGICLGmQl 403 (524)
..++|.|+||||.+. . ..+..++.++.+.+ .++|+-.||-|..+
T Consensus 71 ~~~yD~lvvPGG~~~~~~l~~~~~l~~~l~~~~~~~~k~iaaiC~g~~l 119 (194)
T 4gdh_A 71 AKQYDIAIIPGGGLGAKTLSTTPFVQQVVKEFYKKPNKWIGMICAGTLT 119 (194)
T ss_dssp HHHCSEEEECCCHHHHHHHHTCHHHHHHHHHHTTCTTCEEEEEGGGGHH
T ss_pred cccCCEEEECCCchhHhHhhhCHHHHHHHHHhhhcCCceEEeecccccc
Confidence 356899999999643 2 23456677776644 47899999999743
No 90
>1np6_A Molybdopterin-guanine dinucleotide biosynthesis protein B; mixed alpha-beta fold, elongated beta-sheet, walker A motif, P-loop structural motif; 1.90A {Escherichia coli} SCOP: c.37.1.10 PDB: 1p9n_A
Probab=89.73 E-value=0.42 Score=44.16 Aligned_cols=44 Identities=25% Similarity=0.250 Sum_probs=36.0
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc-ccCC
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY-LNTD 46 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpy-ln~d 46 (524)
++.|.++| -||-||-.....|-..|+.+|++|..+|.||- .++|
T Consensus 6 ~~~i~i~G--~sGsGKTTl~~~l~~~l~~~g~~v~~i~~~~~~~~id 50 (174)
T 1np6_A 6 IPLLAFAA--WSGTGKTTLLKKLIPALCARGIRPGLIKHTHHDMDVD 50 (174)
T ss_dssp CCEEEEEC--CTTSCHHHHHHHHHHHHHHTTCCEEEEEECCC-----
T ss_pred ceEEEEEe--CCCCCHHHHHHHHHHhccccCCceeEEeeCCCccccC
Confidence 46788888 79999999999999999999999999999983 3555
No 91
>1sy7_A Catalase 1; heme oxidation, singlet oxygen, oxidoreductase; HET: HDD HEM; 1.75A {Neurospora crassa} SCOP: c.23.16.3
Probab=89.22 E-value=0.62 Score=52.46 Aligned_cols=101 Identities=13% Similarity=0.036 Sum_probs=61.7
Q ss_pred eEEEEEeccCCCcc-hHHHHHHHHHHcCCceeEEeeeEEeeCCCccc-cc--cCCChhhhhHHHHh--ccCCCEEEECCC
Q 009814 298 VRIAMVGKYTGLSD-AYLSILKALLHASVDLRKKLVIDWIPACDLED-AT--EKENPDAYKAAWKL--LKGADGILVPGG 371 (524)
Q Consensus 298 v~IaiVGkY~~~~d-ay~SI~~aL~~ag~~~~v~v~i~~i~s~~le~-~~--~~~~p~~y~~~~~~--l~~~DGIllpGG 371 (524)
.+|+|+- +..+.. ......++|+.+|+.+.+. ......+.. .. +..+. . .+. ...+|+||||||
T Consensus 535 rkVaILl-~dGfe~~El~~p~dvL~~AG~~V~iv----S~~gg~V~ss~G~~v~~d~-~----l~~v~~~~yDaViVPGG 604 (715)
T 1sy7_A 535 RRVAIII-ADGYDNVAYDAAYAAISANQAIPLVI----GPRRSKVTAANGSTVQPHH-H----LEGFRSTMVDAIFIPGG 604 (715)
T ss_dssp CEEEEEC-CTTBCHHHHHHHHHHHHHTTCEEEEE----ESCSSCEEBTTSCEECCSE-E----TTTCCGGGSSEEEECCC
T ss_pred CEEEEEE-cCCCCHHHHHHHHHHHHhcCCEEEEE----ECCCCceecCCCceEeccc-c----cccCCcccCCEEEEcCC
Confidence 4788883 544432 2455678999999776553 111111110 00 00000 0 011 235799999999
Q ss_pred CCCC----chhHHHHHHHHHHHcCCCEEEEhHhHHHHHHHh
Q 009814 372 FGNR----GVQGKILAAKYAREHRIPYLGICLGMQVAVIEF 408 (524)
Q Consensus 372 fG~r----g~eg~i~air~are~~iP~LGICLGmQll~ie~ 408 (524)
.+.. .....+..++.+.++++|+.+||-|-.+|+-++
T Consensus 605 ~~~~~~l~~~~~l~~~Lr~~~~~gK~IaAIC~G~~lLA~Al 645 (715)
T 1sy7_A 605 AKAAETLSKNGRALHWIREAFGHLKAIGATGEAVDLVAKAI 645 (715)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHTTCEEEEETTHHHHHHHHH
T ss_pred cccHhhhccCHHHHHHHHHHHhCCCEEEEECHHHHHHHHcc
Confidence 5322 234578899999999999999999999988553
No 92
>1ihu_A Arsenical pump-driving ATPase; aluminum fluoride, ADP, ARSA ATPase, ATP binding site, hydro; HET: ADP; 2.15A {Escherichia coli} SCOP: c.37.1.10 c.37.1.10 PDB: 1f48_A* 1ii0_A* 1ii9_A*
Probab=89.04 E-value=0.33 Score=52.76 Aligned_cols=42 Identities=29% Similarity=0.385 Sum_probs=34.0
Q ss_pred EEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccC
Q 009814 3 YVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNT 45 (524)
Q Consensus 3 ~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpyln~ 45 (524)
-|++++| -.|.||-.+|++++..|..+|.+|-++-.||.-|.
T Consensus 328 ~~~~~~~-~~g~Gktt~a~~lA~~l~~~g~~vllvD~Dp~~~l 369 (589)
T 1ihu_A 328 GLIMLMG-KGGVGKTTMAAAIAVRLADMGFDVHLTTSDPAAHL 369 (589)
T ss_dssp EEEEEEC-STTSSHHHHHHHHHHHHHHTTCCEEEEESCCC---
T ss_pred eEEEEec-CCCCChhhHHHHHHHHHHHCCCcEEEEeCCCcccH
Confidence 3455544 57899999999999999999999999999997554
No 93
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=88.21 E-value=0.56 Score=45.04 Aligned_cols=42 Identities=24% Similarity=0.305 Sum_probs=37.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpyln 44 (524)
+|.|.|+++ -.|.||=.+|+.++..|. +|+||-++.+||.-|
T Consensus 27 ~~vI~v~s~-kGGvGKTT~a~~LA~~la-~g~~VlliD~D~~~~ 68 (267)
T 3k9g_A 27 PKIITIASI-KGGVGKSTSAIILATLLS-KNNKVLLIDMDTQAS 68 (267)
T ss_dssp CEEEEECCS-SSSSCHHHHHHHHHHHHT-TTSCEEEEEECTTCH
T ss_pred CeEEEEEeC-CCCchHHHHHHHHHHHHH-CCCCEEEEECCCCCC
Confidence 467778766 589999999999999999 999999999999754
No 94
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=87.71 E-value=0.63 Score=44.82 Aligned_cols=42 Identities=21% Similarity=0.274 Sum_probs=37.8
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpyl 43 (524)
+|-|.|+++ -.|.||=.+|+.|+..|..+|++|-++.+||.-
T Consensus 18 ~~vI~v~s~-kGGvGKTT~a~nLA~~la~~G~~VlliD~D~~~ 59 (262)
T 2ph1_A 18 KSRIAVMSG-KGGVGKSTVTALLAVHYARQGKKVGILDADFLG 59 (262)
T ss_dssp SCEEEEECS-SSCTTHHHHHHHHHHHHHHTTCCEEEEECCSSC
T ss_pred CeEEEEEcC-CCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 467888876 479999999999999999999999999999986
No 95
>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2}
Probab=87.43 E-value=0.78 Score=46.28 Aligned_cols=44 Identities=32% Similarity=0.440 Sum_probs=39.8
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCC
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTD 46 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpyln~d 46 (524)
+|.|-|+| =-|+||=.||+.|+..|..+|+||-++=+||+.|.-
T Consensus 48 aKVIAIaG--KGGVGKTTtavNLA~aLA~~GkkVllID~Dpq~~s~ 91 (314)
T 3fwy_A 48 AKVFAVYG--KGGIGKSTTSSNLSAAFSILGKRVLQIGCDPKHDST 91 (314)
T ss_dssp CEEEEEEC--STTSSHHHHHHHHHHHHHHTTCCEEEEEESSSCCTT
T ss_pred ceEEEEEC--CCccCHHHHHHHHHHHHHHCCCeEEEEecCCCCccc
Confidence 58899995 668999999999999999999999999999987753
No 96
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=86.85 E-value=0.82 Score=44.55 Aligned_cols=42 Identities=26% Similarity=0.449 Sum_probs=38.5
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpyln 44 (524)
||-|.|+ | =-|.||=.+|+.|+..|..+|+||-++-+||.-|
T Consensus 2 MkvIavs-~-KGGvGKTT~a~nLA~~La~~G~rVlliD~D~q~~ 43 (289)
T 2afh_E 2 MRQCAIY-G-KGGIGKSTTTQNLVAALAEMGKKVMIVGCDPKAD 43 (289)
T ss_dssp CEEEEEE-E-CTTSSHHHHHHHHHHHHHHTTCCEEEEEECSSSC
T ss_pred ceEEEEe-C-CCcCcHHHHHHHHHHHHHHCCCeEEEEecCCCCC
Confidence 7888886 5 8899999999999999999999999999999754
No 97
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=86.51 E-value=0.8 Score=43.80 Aligned_cols=42 Identities=29% Similarity=0.470 Sum_probs=38.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpyln 44 (524)
||-|.|+ | =-|.||=.+|+.|+..|..+|+||-++-+||.-|
T Consensus 1 M~vI~vs-~-KGGvGKTT~a~nLA~~la~~G~~VlliD~D~q~~ 42 (269)
T 1cp2_A 1 MRQVAIY-G-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPKAD 42 (269)
T ss_dssp CEEEEEE-E-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTTSC
T ss_pred CcEEEEe-c-CCCCcHHHHHHHHHHHHHHCCCcEEEEcCCCCCC
Confidence 7888886 5 8899999999999999999999999999999654
No 98
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=85.98 E-value=0.62 Score=46.77 Aligned_cols=41 Identities=22% Similarity=0.426 Sum_probs=37.0
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpy 42 (524)
||-|+||+| -.|.||=.+|++++..|..+|.||-++-.||-
T Consensus 13 m~~i~v~sg-KGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~ 53 (324)
T 3zq6_A 13 KTTFVFIGG-KGGVGKTTISAATALWMARSGKKTLVISTDPA 53 (324)
T ss_dssp BCEEEEEEE-STTSSHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred CeEEEEEeC-CCCchHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 467777877 78999999999999999999999999999983
No 99
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=84.68 E-value=0.92 Score=43.46 Aligned_cols=43 Identities=28% Similarity=0.444 Sum_probs=37.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpyln 44 (524)
||-|.|+++ -.|.||=.+|+.|+..|..+|+||-++.+||.-|
T Consensus 6 ~~vI~v~s~-kGGvGKTt~a~~LA~~la~~g~~VlliD~D~~~~ 48 (257)
T 1wcv_1 6 VRRIALANQ-KGGVGKTTTAINLAAYLARLGKRVLLVDLDPQGN 48 (257)
T ss_dssp CCEEEECCS-SCCHHHHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred CEEEEEEeC-CCCchHHHHHHHHHHHHHHCCCCEEEEECCCCcC
Confidence 467888764 5789999999999999999999999999999644
No 100
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=84.29 E-value=1.2 Score=41.30 Aligned_cols=40 Identities=30% Similarity=0.355 Sum_probs=34.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpyl 43 (524)
+|-|+||++ -.|.||=.+|+.|+..|..+|+||-. +||-.
T Consensus 1 ~k~I~v~s~-kgGvGKTt~a~nLa~~la~~G~rVll--~dp~~ 40 (224)
T 1byi_A 1 SKRYFVTGT-DTEVGKTVASCALLQAAKAAGYRTAG--YKPVA 40 (224)
T ss_dssp CEEEEEEES-STTSCHHHHHHHHHHHHHHTTCCEEE--ECSEE
T ss_pred CceEEEEEC-CCCCCHHHHHHHHHHHHHHCCCCEEE--Eccee
Confidence 578899875 57899999999999999999999998 56744
No 101
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=82.91 E-value=1.2 Score=45.27 Aligned_cols=41 Identities=32% Similarity=0.536 Sum_probs=36.7
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpy 42 (524)
||-|+||+| -.|.||=.+|++++..|..+|.||-++-.||-
T Consensus 25 ~~~i~v~sg-KGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~ 65 (349)
T 3ug7_A 25 GTKYIMFGG-KGGVGKTTMSAATGVYLAEKGLKVVIVSTDPA 65 (349)
T ss_dssp SCEEEEEEC-SSSTTHHHHHHHHHHHHHHSSCCEEEEECCTT
T ss_pred CCEEEEEeC-CCCccHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 456777777 78999999999999999999999999999984
No 102
>2obn_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: PG4; 2.30A {Anabaena variabilis}
Probab=82.31 E-value=12 Score=38.61 Aligned_cols=151 Identities=17% Similarity=0.151 Sum_probs=94.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCCccccCCCCccccccCC
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDI 80 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtmsp~~hgevfv~~dg~e~dldlg~yerf~~~ 80 (524)
+|-|||||= =+++||=.++..|-+.|+.+|+++..+|- -|-|..- ...|-..|-
T Consensus 152 ~k~i~v~GT-D~~VGK~~ts~~L~~~l~~~G~~a~~~~t-------------gqtg~~~-~~~gi~~Da----------- 205 (349)
T 2obn_A 152 CRRVLTVGT-DMAIGKMSTSLELHWAAKLRGWRSKFLAT-------------GQTGVML-EGDGVALDA----------- 205 (349)
T ss_dssp SEEEEEEES-SSSSSHHHHHHHHHHHHHHTTCCEEEECC-------------SHHHHHH-HSCSCCGGG-----------
T ss_pred ceEEEEcCC-CccccceeHHHHHHHHHHhcCCcEEEEec-------------cchhhhh-hcCCcchhH-----------
Confidence 367899986 77799999999999999999999998542 2433211 111212221
Q ss_pred CCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccCcchHH
Q 009814 81 KLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFI 160 (524)
Q Consensus 81 ~~~~~~n~t~g~iy~~vi~ker~g~ylg~tvqviphit~ei~~~i~~~~~~~~d~~~~~~d~~i~eiggtvgdies~pf~ 160 (524)
-.....+| ++.+.+.+++ +++|+++||==|-+--=-+...+
T Consensus 206 ---v~~df~aG----------------------------~ve~~~~~~~--------~~~d~vlVEGqGgl~~P~~~~t~ 246 (349)
T 2obn_A 206 ---VRVDFAAG----------------------------AVEQMVMRYG--------KNYDILHIEGQGSLLHPGSTATL 246 (349)
T ss_dssp ---SBHHHHHH----------------------------HHHHHHHHHT--------TTCSEEEECCCCCTTSTTCCTHH
T ss_pred ---HHHHHHhh----------------------------hHHHHHHHhc--------cCCCEEEEeCCCcccCcChHhHH
Confidence 00111122 3334444442 36899999965544321122233
Q ss_pred HHHHHhhhhcCCCCEEEEEeeeeeeecCCCccccCCchhhHHHhhc--------CCCcccEEEEecCC
Q 009814 161 EALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRG--------QGLTPNILACRSTV 220 (524)
Q Consensus 161 ea~rq~~~~~~~~n~~~ih~~~vp~~~~~~e~ktkptq~sv~~lrs--------~Gi~pd~lv~R~~~ 220 (524)
.|-....+.-++.+|-.=...+..--+++--|-+|.+...+. .|+++-++++-...
T Consensus 247 ----~ll~g~~p~~vILv~~~~~g~i~~~~~~~~p~l~~~i~t~e~l~~~~~~~~~~~V~Gi~lN~~~ 310 (349)
T 2obn_A 247 ----PLIRGSQPTQLVLVHRAGQTHNGNNPHVPIPPLPEVIRLYETVASGGGAFGTVPVVGIALNTAH 310 (349)
T ss_dssp ----HHHHHHCCSEEEEEEETTCCBCSSCTTSBCCCHHHHHHHHHHHHHTTTTSCCCCEEEEEEECTT
T ss_pred ----HHHHHcCCCeEEEEECCCCceECCCCccCCCCHHHHHHHHHHHHHhhccCCCCcEEEEEEECCC
Confidence 333444556699999877777765556666677877776665 68999999988755
No 103
>3pg5_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 3.30A {Corynebacterium diphtheriae}
Probab=82.20 E-value=1.3 Score=45.08 Aligned_cols=46 Identities=22% Similarity=0.356 Sum_probs=41.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCC
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDA 47 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpyln~d~ 47 (524)
||.|.|+++ --|.||=.+|+.+|..|..+|.||-++-+||.-|.-.
T Consensus 1 MkvIav~s~-KGGvGKTT~a~nLA~~LA~~G~rVLlID~D~q~~~~~ 46 (361)
T 3pg5_A 1 MRTISFFNN-KGGVGKTTLSTNVAHYFALQGKRVLYVDCDPQCNATQ 46 (361)
T ss_dssp CEEEEBCCS-SCCHHHHHHHHHHHHHHHHTTCCEEEEECCTTCTTHH
T ss_pred CeEEEEEcC-CCCCcHHHHHHHHHHHHHhCCCcEEEEEcCCCCChhh
Confidence 788999877 7899999999999999999999999999999866543
No 104
>1nks_A Adenylate kinase; thermophilic, transferase; HET: AMP ADP; 2.57A {Sulfolobus acidocaldarius} SCOP: c.37.1.1
Probab=81.49 E-value=1.1 Score=40.06 Aligned_cols=36 Identities=31% Similarity=0.458 Sum_probs=32.2
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|++|+++|. +|-||...+..|...|...|+++..+-
T Consensus 1 M~~I~i~G~--~GsGKsT~~~~L~~~l~~~g~~~~~~~ 36 (194)
T 1nks_A 1 MKIGIVTGI--PGVGKSTVLAKVKEILDNQGINNKIIN 36 (194)
T ss_dssp CEEEEEEEC--TTSCHHHHHHHHHHHHHTTTCCEEEEE
T ss_pred CeEEEEECC--CCCCHHHHHHHHHHHHHhcCceEEEEE
Confidence 789999995 899999999999999999999887763
No 105
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=81.43 E-value=1.1 Score=44.67 Aligned_cols=72 Identities=26% Similarity=0.228 Sum_probs=49.5
Q ss_pred CeEEEEEeccCCCcchHHHHHHHHHHcCCceeEEeeeEEeeCCCccccccCCChhhhhHHHHhccCCCEEEECCCCCCCc
Q 009814 297 PVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRG 376 (524)
Q Consensus 297 ~v~IaiVGkY~~~~day~SI~~aL~~ag~~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~l~~~DGIllpGGfG~rg 376 (524)
.++|+++++.... ...+.+.|+..|+++.+. .+.- +.+.++|.|++-||=|
T Consensus 29 ~mki~iv~~~~~~---~~~l~~~L~~~g~~v~~~-------~~~~----------------~~~~~~DlvIvlGGDG--- 79 (278)
T 1z0s_A 29 GMRAAVVYKTDGH---VKRIEEALKRLEVEVELF-------NQPS----------------EELENFDFIVSVGGDG--- 79 (278)
T ss_dssp -CEEEEEESSSTT---HHHHHHHHHHTTCEEEEE-------SSCC----------------GGGGGSSEEEEEECHH---
T ss_pred ceEEEEEeCCcHH---HHHHHHHHHHCCCEEEEc-------cccc----------------cccCCCCEEEEECCCH---
Confidence 3689999876532 567788899999876543 1110 2346789999999832
Q ss_pred hhHHHHHHHHHHHcCCCEEEEhHh
Q 009814 377 VQGKILAAKYAREHRIPYLGICLG 400 (524)
Q Consensus 377 ~eg~i~air~are~~iP~LGICLG 400 (524)
..+.+++++... +|++||=+|
T Consensus 80 --T~L~aa~~~~~~-~PilGIN~G 100 (278)
T 1z0s_A 80 --TILRILQKLKRC-PPIFGINTG 100 (278)
T ss_dssp --HHHHHHTTCSSC-CCEEEEECS
T ss_pred --HHHHHHHHhCCC-CcEEEECCC
Confidence 244667766555 999999887
No 106
>1ls1_A Signal recognition particle protein; FFH, SRP54, SRP, GTPase, ultrahigh resolution, protein transport; 1.10A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 1jpn_B* 1jpj_A* 1ry1_U* 2j45_A* 1o87_A* 2c04_A* 2j46_A* 1rj9_B* 2c03_A* 2j7p_A* 1okk_A* 2cnw_A* 1ng1_A* 2xkv_A 3ng1_A 1ffh_A 2ng1_A*
Probab=81.41 E-value=9.4 Score=37.75 Aligned_cols=40 Identities=25% Similarity=0.361 Sum_probs=35.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpyl 43 (524)
+.|.++| .+|-||=.+++.|+.+++..|.+|.++-.|++-
T Consensus 99 ~~i~i~g--~~G~GKTT~~~~la~~~~~~~~~v~l~~~d~~~ 138 (295)
T 1ls1_A 99 NLWFLVG--LQGSGKTTTAAKLALYYKGKGRRPLLVAADTQR 138 (295)
T ss_dssp EEEEEEC--CTTTTHHHHHHHHHHHHHHTTCCEEEEECCSSC
T ss_pred eEEEEEC--CCCCCHHHHHHHHHHHHHHcCCeEEEecCCccc
Confidence 5678885 499999999999999999999999999999874
No 107
>3bhn_A THIJ/PFPI domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.76A {Shewanella loihica pv-4}
Probab=80.84 E-value=0.42 Score=46.38 Aligned_cols=45 Identities=22% Similarity=0.170 Sum_probs=32.0
Q ss_pred ccCCCEEEECCC-CCCC---chhHHHHHHHHHHHcCC-CEEEEhHhHHHHHH
Q 009814 360 LKGADGILVPGG-FGNR---GVQGKILAAKYAREHRI-PYLGICLGMQVAVI 406 (524)
Q Consensus 360 l~~~DGIllpGG-fG~r---g~eg~i~air~are~~i-P~LGICLGmQll~i 406 (524)
...+|.|+|||| +|.+ ..+..+..+ ..+++. |+.+||-|-.+|+-
T Consensus 78 ~~~~D~liVPGG~~g~~~l~~~~~l~~~L--~~~~~~~~IaaIC~G~~lLa~ 127 (236)
T 3bhn_A 78 VKEQDVVLITSGYRGIPAALQDENFMSAL--KLDPSRQLIGSICAGSFVLHE 127 (236)
T ss_dssp GGGCSEEEECCCTTHHHHHHTCHHHHHHC--CCCTTTCEEEEETTHHHHHHH
T ss_pred ccCCCEEEEcCCccCHhhhccCHHHHHHH--HhCCCCCEEEEEcHHHHHHHH
Confidence 467899999999 6653 223455555 333455 99999999998873
No 108
>2oze_A ORF delta'; para, walker type atpases, DNA segregation, PSM19035, plasmid, DNA binding protein; HET: AGS EPE; 1.83A {Streptococcus pyogenes}
Probab=79.42 E-value=1.7 Score=42.21 Aligned_cols=42 Identities=19% Similarity=0.266 Sum_probs=35.8
Q ss_pred EEEEeCC-ccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 009814 3 YVLVTGG-VVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (524)
Q Consensus 3 ~i~vtgg-v~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpyln 44 (524)
-|.|++. .-.|.||=.+|+.|+..|..+|+||-++.+||.-|
T Consensus 36 ~i~v~~~s~KGGvGKTT~a~nLA~~la~~G~rVlliD~D~q~~ 78 (298)
T 2oze_A 36 AIVILNNYFKGGVGKSKLSTMFAYLTDKLNLKVLMIDKDLQAT 78 (298)
T ss_dssp CEEEEECCSSSSSSHHHHHHHHHHHHHHTTCCEEEEEECTTCH
T ss_pred EEEEEeccCCCCchHHHHHHHHHHHHHhCCCeEEEEeCCCCCC
Confidence 3555543 56789999999999999999999999999999865
No 109
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=78.08 E-value=2.3 Score=42.17 Aligned_cols=154 Identities=18% Similarity=0.272 Sum_probs=90.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc-------ccCCCCCCCccccceEEEccCCccccCCCCc
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY-------LNTDAGTMSPFEHGEVFVLDDGGEVDLDLGN 73 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpy-------ln~d~gtmsp~~hgevfv~~dg~e~dldlg~ 73 (524)
+|-|+|||. -.|.||=.+|+.|+..|...|.||-++..||. +++++ +.| -+|+
T Consensus 104 ~kvI~vts~-kgG~GKTtva~nLA~~lA~~G~rVLLID~D~r~~~l~~~~~~~~------~~g---------l~~~---- 163 (299)
T 3cio_A 104 NNILMITGA-TPDSGKTFVSSTLAAVIAQSDQKVLFIDADLRRGYSHNLFTVSN------EHG---------LSEY---- 163 (299)
T ss_dssp CCEEEEEES-SSSSCHHHHHHHHHHHHHHTTCCEEEEECCTTTCCHHHHTTCCC------SSS---------HHHH----
T ss_pred CeEEEEECC-CCCCChHHHHHHHHHHHHhCCCcEEEEECCCCCccHHHHcCCCC------CCC---------HHHH----
Confidence 367888864 47999999999999999999999999999983 33322 111 0110
Q ss_pred cccccCCCCCCCCcccchHhhHHHHhhhhcCCCCCCeeEEccc-----------chHHHHHHHHHHhcccCCCCCCCCcE
Q 009814 74 YERFMDIKLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPH-----------ITDEIQDWIERVAMIPVDGKEGPVDV 142 (524)
Q Consensus 74 yerf~~~~~~~~~n~t~g~iy~~vi~ker~g~ylg~tvqviph-----------it~ei~~~i~~~~~~~~d~~~~~~d~ 142 (524)
|. .. .-..++|.+-.. ..+.|+|- -.+.+++.+..+. ..+|+
T Consensus 164 ----L~----~~------~~l~~~i~~~~~-----~~l~vl~~g~~~~~~~ell~~~~l~~ll~~l~--------~~yD~ 216 (299)
T 3cio_A 164 ----LA----GK------DELNKVIQHFGK-----GGFDVITRGQVPPNPSELLMRDRMRQLLEWAN--------DHYDL 216 (299)
T ss_dssp ----HT----TS------SCHHHHCEEETT-----TTEEEECCCSCCSCHHHHHTSHHHHHHHHHHH--------HHCSE
T ss_pred ----Cc----CC------CCHHHhhhccCC-----CCEEEEECCCCCCCHHHHhCHHHHHHHHHHHH--------hCCCE
Confidence 00 00 002233332110 22445542 1245666666664 36899
Q ss_pred EEEeeCccccccCcchHHHHHHHhhhhcCCCCEEEEEeeeeeeecCCCccccCCchhhHHHhhcCCCcccEEEEec
Q 009814 143 CVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRS 218 (524)
Q Consensus 143 ~i~eiggtvgdies~pf~ea~rq~~~~~~~~n~~~ih~~~vp~~~~~~e~ktkptq~sv~~lrs~Gi~pd~lv~R~ 218 (524)
|||+..+..+-- +|. .+.... + ..+++.- .+....+-++.+++.|+..|+..-++|+-.
T Consensus 217 VIIDtpp~~~~~------d~~-~l~~~a--d------~vilV~~--~~~~~~~~~~~~~~~l~~~~~~~~GvVlN~ 275 (299)
T 3cio_A 217 VIVDTPPMLAVS------DAA-VVGRSV--G------TSLLVAR--FGLNTAKEVSLSMQRLEQAGVNIKGAILNG 275 (299)
T ss_dssp EEEECCCTTTCT------HHH-HHGGGC--S------EEEEEEE--TTTSCTTHHHHHHHHHHHTTCCCCCEEEEE
T ss_pred EEEcCCCCchhH------HHH-HHHHHC--C------EEEEEEc--CCCChHHHHHHHHHHHHhCCCCeEEEEEeC
Confidence 999999876521 111 111111 1 1222222 344555677889999999999888777744
No 110
>3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium rectale}
Probab=77.98 E-value=2 Score=43.89 Aligned_cols=44 Identities=20% Similarity=0.302 Sum_probs=39.2
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccC
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNT 45 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpyln~ 45 (524)
+|.|.|++| -.|.||=.+|+.++..|..+|.+|-++-+||+-|+
T Consensus 143 ~kvIav~s~-KGGvGKTT~a~nLA~~La~~g~rVlliD~D~~~~l 186 (373)
T 3fkq_A 143 SSVVIFTSP-CGGVGTSTVAAACAIAHANMGKKVFYLNIEQCGTT 186 (373)
T ss_dssp CEEEEEECS-STTSSHHHHHHHHHHHHHHHTCCEEEEECCTTCCH
T ss_pred ceEEEEECC-CCCChHHHHHHHHHHHHHhCCCCEEEEECCCCCCH
Confidence 578888887 68999999999999999999999999999976554
No 111
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=77.86 E-value=2.1 Score=43.58 Aligned_cols=40 Identities=28% Similarity=0.486 Sum_probs=34.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpyl 43 (524)
|++|++| -.|.||=.+|++++..|..+|.||-++-.||--
T Consensus 17 ~i~~~sg--kGGvGKTt~a~~lA~~la~~g~~vllid~D~~~ 56 (334)
T 3iqw_A 17 RWIFVGG--KGGVGKTTTSCSLAIQLAKVRRSVLLLSTDPAH 56 (334)
T ss_dssp CEEEEEC--STTSSHHHHHHHHHHHHTTSSSCEEEEECCSSC
T ss_pred EEEEEeC--CCCccHHHHHHHHHHHHHhCCCcEEEEECCCCC
Confidence 5665555 789999999999999999999999999999743
No 112
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=77.65 E-value=2.1 Score=43.84 Aligned_cols=40 Identities=35% Similarity=0.531 Sum_probs=36.5
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHH--HCCCeeEEeeeccc
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLK--ACGLRVTCIKIDPY 42 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~--~~g~~v~~~k~dpy 42 (524)
+|++|++| -.|.||=.+|++++..|. .+|.+|-++-.||-
T Consensus 18 ~~i~~~~g--kGGvGKTt~a~~lA~~la~~~~g~~vllid~D~~ 59 (348)
T 3io3_A 18 LKWIFVGG--KGGVGKTTTSSSVAVQLALAQPNEQFLLISTDPA 59 (348)
T ss_dssp CSEEEEEC--STTSSHHHHHHHHHHHHHHHCTTSCEEEEECCSS
T ss_pred cEEEEEeC--CCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCCC
Confidence 46788877 889999999999999999 99999999999985
No 113
>1ihu_A Arsenical pump-driving ATPase; aluminum fluoride, ADP, ARSA ATPase, ATP binding site, hydro; HET: ADP; 2.15A {Escherichia coli} SCOP: c.37.1.10 c.37.1.10 PDB: 1f48_A* 1ii0_A* 1ii9_A*
Probab=77.54 E-value=2.3 Score=46.14 Aligned_cols=40 Identities=30% Similarity=0.496 Sum_probs=35.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpy 42 (524)
+|++|++|- .|.||=.+|++++..|..+|.||-.+-.||-
T Consensus 8 ~~i~~~sgk--GGvGKTT~a~~lA~~lA~~G~rVLlvd~D~~ 47 (589)
T 1ihu_A 8 PPYLFFTGK--GGVGKTSISCATAIRLAEQGKRVLLVSTDPA 47 (589)
T ss_dssp CSEEEEECS--TTSSHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CEEEEEeCC--CcCHHHHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 367777764 9999999999999999999999999999983
No 114
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=77.16 E-value=2.9 Score=40.83 Aligned_cols=41 Identities=20% Similarity=0.352 Sum_probs=36.2
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpy 42 (524)
+|-|+||+. -.|.||=.+|+.|+..|...|.||-++-.||.
T Consensus 82 ~kvI~vts~-kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~~ 122 (271)
T 3bfv_A 82 VQSIVITSE-APGAGKSTIAANLAVAYAQAGYKTLIVDGDMR 122 (271)
T ss_dssp CCEEEEECS-STTSSHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred CeEEEEECC-CCCCcHHHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 467888875 56899999999999999999999999999964
No 115
>2woo_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; 3.01A {Schizosaccharomyces pombe}
Probab=76.80 E-value=2 Score=43.27 Aligned_cols=41 Identities=27% Similarity=0.386 Sum_probs=35.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpyl 43 (524)
|-|+||+| --|.||=.+|+.++..|..+|+||-++-.||.-
T Consensus 19 ~~i~v~sg-kGGvGKTTva~~LA~~lA~~G~rVllvD~D~~~ 59 (329)
T 2woo_A 19 LKWIFVGG-KGGVGKTTTSCSLAIQMSKVRSSVLLISTDPAH 59 (329)
T ss_dssp CCEEEEEC-SSSSSHHHHHHHHHHHHHTSSSCEEEEECCTTC
T ss_pred CEEEEEeC-CCCCcHHHHHHHHHHHHHHCCCeEEEEECCCCc
Confidence 34566666 689999999999999999999999999999953
No 116
>2woj_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; HET: ADP; 1.99A {Saccharomyces cerevisiae} PDB: 3h84_A 3zs8_A 3zs9_A* 3sja_A 3sjb_A 3sjc_A 3sjd_A* 3idq_A 3a36_A 3a37_A*
Probab=76.27 E-value=1.7 Score=44.42 Aligned_cols=42 Identities=26% Similarity=0.401 Sum_probs=36.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHH--HCCCeeEEeeeccccc
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLK--ACGLRVTCIKIDPYLN 44 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~--~~g~~v~~~k~dpyln 44 (524)
|-|.||+| --|.||=.+|++++..|. .+|.||-++..||--|
T Consensus 18 ~~i~v~sg-KGGvGKTTvaanLA~~lA~~~~G~rVLLvD~D~~~~ 61 (354)
T 2woj_A 18 HKWIFVGG-KGGVGKTTSSCSIAIQMALSQPNKQFLLISTDPAHN 61 (354)
T ss_dssp CCEEEEEE-STTSSHHHHHHHHHHHHHHHCTTSCEEEEECCSSCC
T ss_pred cEEEEEeC-CCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCCCCC
Confidence 34666666 789999999999999999 9999999999998533
No 117
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=75.53 E-value=12 Score=32.39 Aligned_cols=39 Identities=13% Similarity=0.056 Sum_probs=30.9
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEEhHhHHHHH
Q 009814 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLGMQVAV 405 (524)
Q Consensus 361 ~~~DGIllpGGfG~rg~eg~i~air~are~~iP~LGICLGmQll~ 405 (524)
.++.+|++..|+-+ -++++.|+++++.++|=|+|+++-.
T Consensus 81 ~g~k~v~~~~G~~~------~e~~~~a~~~Girvv~nC~gv~l~~ 119 (122)
T 3ff4_A 81 LKPKRVIFNPGTEN------EELEEILSENGIEPVIGCTLVMLSA 119 (122)
T ss_dssp HCCSEEEECTTCCC------HHHHHHHHHTTCEEEESCHHHHHHH
T ss_pred cCCCEEEECCCCCh------HHHHHHHHHcCCeEECCcCeEEecC
Confidence 35677888887743 3678889999999999999998743
No 118
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=75.41 E-value=2.8 Score=40.47 Aligned_cols=34 Identities=41% Similarity=0.654 Sum_probs=28.8
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dp 41 (524)
|| |+||||- |-+.+.|-+.|.++|++|+.+--+|
T Consensus 1 Mk-ILVTGat------GfIG~~L~~~L~~~G~~V~~l~R~~ 34 (298)
T 4b4o_A 1 MR-VLVGGGT------GFIGTALTQLLNARGHEVTLVSRKP 34 (298)
T ss_dssp CE-EEEETTT------SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CE-EEEECCC------CHHHHHHHHHHHHCCCEEEEEECCC
Confidence 78 9999964 7888999999999999999985543
No 119
>3cwq_A Para family chromosome partitioning protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: ADP; 2.47A {Synechocystis SP}
Probab=74.88 E-value=3 Score=38.84 Aligned_cols=40 Identities=28% Similarity=0.290 Sum_probs=34.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpyl 43 (524)
|-|.|+++ =.|.||=.+|+.|+..|..+| +|.++.+||.-
T Consensus 1 kvI~v~s~-KGGvGKTT~a~~LA~~la~~g-~VlliD~D~q~ 40 (209)
T 3cwq_A 1 MIITVASF-KGGVGKTTTAVHLSAYLALQG-ETLLIDGDPNR 40 (209)
T ss_dssp CEEEEEES-STTSSHHHHHHHHHHHHHTTS-CEEEEEECTTC
T ss_pred CEEEEEcC-CCCCcHHHHHHHHHHHHHhcC-CEEEEECCCCC
Confidence 34566643 578999999999999999999 99999999964
No 120
>2z0h_A DTMP kinase, thymidylate kinase; ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics, NPPSFA; HET: ADP TYD; 2.10A {Thermotoga maritima} PDB: 3hjn_A*
Probab=74.52 E-value=3.7 Score=36.77 Aligned_cols=33 Identities=21% Similarity=0.335 Sum_probs=28.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~ 36 (524)
++|++||+ +|-||...+.-|...|+..|+.|..
T Consensus 1 ~~I~l~G~--~GsGKsT~~~~L~~~l~~~g~~v~~ 33 (197)
T 2z0h_A 1 MFITFEGI--DGSGKSTQIQLLAQYLEKRGKKVIL 33 (197)
T ss_dssp CEEEEECS--TTSSHHHHHHHHHHHHHHCCC-EEE
T ss_pred CEEEEECC--CCCCHHHHHHHHHHHHHHCCCeEEE
Confidence 37999997 6889999999999999999998853
No 121
>2f1r_A Molybdopterin-guanine dinucleotide biosynthesis protein B (MOBB); structural genomics, PSI, protein structure initiative; 2.10A {Archaeoglobus fulgidus}
Probab=71.78 E-value=2.8 Score=38.35 Aligned_cols=40 Identities=25% Similarity=0.331 Sum_probs=34.0
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpy 42 (524)
|+.|.|+| -||-||=..+..|..+++.+|+++-.+|+|+.
T Consensus 2 ~~~v~IvG--~SGsGKSTL~~~L~~~~~~~g~~~G~I~~dg~ 41 (171)
T 2f1r_A 2 SLILSIVG--TSDSGKTTLITRMMPILRERGLRVAVVKRHAH 41 (171)
T ss_dssp -CEEEEEE--SCHHHHHHHHHHHHHHHHHTTCCEEEEEC---
T ss_pred ceEEEEEC--CCCCCHHHHHHHHHHHhhhcCCceEEEEEcCc
Confidence 47788999 79999999999999999999999999999874
No 122
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=71.73 E-value=2 Score=40.06 Aligned_cols=34 Identities=29% Similarity=0.400 Sum_probs=24.8
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~d 40 (524)
||-++||||- +|||+.++ +.|..+|++|.+.=.+
T Consensus 1 Mk~vlVTGas-~gIG~~~a-----~~l~~~G~~V~~~~r~ 34 (230)
T 3guy_A 1 MSLIVITGAS-SGLGAELA-----KLYDAEGKATYLTGRS 34 (230)
T ss_dssp --CEEEESTT-SHHHHHHH-----HHHHHTTCCEEEEESC
T ss_pred CCEEEEecCC-chHHHHHH-----HHHHHCCCEEEEEeCC
Confidence 7899999996 78887654 5677889998876443
No 123
>1gtv_A TMK, thymidylate kinase; transferase, transferase (ATP:TMP phosphotransferase); HET: TYD TMP; 1.55A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1g3u_A* 1gsi_A* 1mrn_A* 1mrs_A* 1n5i_A* 1n5j_A* 1n5k_A* 1n5l_A* 1w2g_A* 1w2h_A*
Probab=70.93 E-value=1.7 Score=39.75 Aligned_cols=36 Identities=22% Similarity=0.415 Sum_probs=31.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
++|.|+| .||-||...+..|...|..+|++|..++-
T Consensus 1 ~~I~i~G--~~GsGKsTl~~~L~~~l~~~g~~v~~~~~ 36 (214)
T 1gtv_A 1 MLIAIEG--VDGAGKRTLVEKLSGAFRAAGRSVATLAF 36 (214)
T ss_dssp CEEEEEE--EEEEEHHHHHHHHHHHHHEEEEEEEEEES
T ss_pred CEEEEEc--CCCCCHHHHHHHHHHHHHhcCCeEEEEee
Confidence 4788888 68999999999999999999999987763
No 124
>1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A
Probab=69.41 E-value=6.3 Score=39.68 Aligned_cols=39 Identities=21% Similarity=0.414 Sum_probs=35.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpy 42 (524)
+.|.|+| . +|-||=.+++.|+.+|+..|.+|.++-.|+|
T Consensus 106 ~vI~ivG-~-~G~GKTT~~~~LA~~l~~~g~kVllid~D~~ 144 (320)
T 1zu4_A 106 NIFMLVG-V-NGTGKTTSLAKMANYYAELGYKVLIAAADTF 144 (320)
T ss_dssp EEEEEES-S-TTSSHHHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred eEEEEEC-C-CCCCHHHHHHHHHHHHHHCCCeEEEEeCCCc
Confidence 5788887 4 9999999999999999999999999999976
No 125
>2v3c_C SRP54, signal recognition 54 kDa protein; nucleotide-binding, signal recognition particle, GTP-binding, RNA-binding; 2.50A {Methanocaldococcus jannaschii} PDB: 3ndb_B
Probab=68.43 E-value=2.8 Score=44.13 Aligned_cols=40 Identities=30% Similarity=0.476 Sum_probs=36.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpyl 43 (524)
+.|.++|- +|.||=.+++.|+..|+.+|++|.++-.|||-
T Consensus 100 ~vI~ivG~--~GvGKTTla~~La~~l~~~G~kVllv~~D~~r 139 (432)
T 2v3c_C 100 NVILLVGI--QGSGKTTTAAKLARYIQKRGLKPALIAADTYR 139 (432)
T ss_dssp CCEEEECC--SSSSTTHHHHHHHHHHHHHHCCEEEECCSCCC
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHHHcCCeEEEEeccccC
Confidence 36788883 89999999999999999999999999999984
No 126
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=67.81 E-value=7.6 Score=40.19 Aligned_cols=94 Identities=14% Similarity=0.174 Sum_probs=53.7
Q ss_pred eEEEEEeccCCC--cchHHHHHHHHHHcCCceeEEeeeEEeeCCCccccccCCChh---h---hhHH-HHhccCCCEEEE
Q 009814 298 VRIAMVGKYTGL--SDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPD---A---YKAA-WKLLKGADGILV 368 (524)
Q Consensus 298 v~IaiVGkY~~~--~day~SI~~aL~~ag~~~~v~v~i~~i~s~~le~~~~~~~p~---~---y~~~-~~~l~~~DGIll 368 (524)
.+|+||+|+..- ......+.+.|...|+.+-+.-++ ++++........+. . +... .+.-..+|-||.
T Consensus 39 k~I~iv~K~~~~~~~~~~~~l~~~L~~~~~~V~ve~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DlvI~ 114 (365)
T 3pfn_A 39 KSVLVIKKMRDASLLQPFKELCTHLMEENMIVYVEKKV----LEDPAIASDESFGAVKKKFCTFREDYDDISNQIDFIIC 114 (365)
T ss_dssp CEEEEEECTTCGGGHHHHHHHHHHHHHTSCEEEEEHHH----HHSHHHHHCSTTHHHHHHCEEECTTTCCCTTTCSEEEE
T ss_pred CEEEEEecCCCHHHHHHHHHHHHHHHHCCCEEEEehHH----hhhhccccccccccccccccccccChhhcccCCCEEEE
Confidence 479999998642 234567789999988665443110 01000000000000 0 0000 012257899999
Q ss_pred CCCCCCCchhHHHHHHHHHHHcCCCEEEEhHh
Q 009814 369 PGGFGNRGVQGKILAAKYAREHRIPYLGICLG 400 (524)
Q Consensus 369 pGGfG~rg~eg~i~air~are~~iP~LGICLG 400 (524)
=||=| -.+.+++++....+|+|||=+|
T Consensus 115 lGGDG-----T~L~aa~~~~~~~~PvlGiN~G 141 (365)
T 3pfn_A 115 LGGDG-----TLLYASSLFQGSVPPVMAFHLG 141 (365)
T ss_dssp ESSTT-----HHHHHHHHCSSSCCCEEEEESS
T ss_pred EcChH-----HHHHHHHHhccCCCCEEEEcCC
Confidence 99854 3667777777778999999887
No 127
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=66.68 E-value=5.7 Score=39.22 Aligned_cols=40 Identities=18% Similarity=0.301 Sum_probs=35.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpy 42 (524)
|-|.||++ -.|.||=.+|+.|+..|...|.||-+|-.||.
T Consensus 93 kvI~vts~-kgG~GKTtva~nLA~~lA~~G~rVLLID~D~~ 132 (286)
T 3la6_A 93 NVLMMTGV-SPSIGMTFVCANLAAVISQTNKRVLLIDCDMR 132 (286)
T ss_dssp CEEEEEES-SSSSSHHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred eEEEEECC-CCCCcHHHHHHHHHHHHHhCCCCEEEEeccCC
Confidence 67888875 46899999999999999999999999999985
No 128
>2oyn_A Hypothetical protein MJ0056; structural genomics, unknown function, PSI-2, protein structure initiative; HET: CDP; 1.85A {Methanocaldococcus jannaschii DSM2661} SCOP: b.43.5.2 PDB: 2p3m_A 2vbs_A 2vbt_A* 2vbu_A* 2vbv_A*
Probab=65.90 E-value=2.3 Score=38.70 Aligned_cols=41 Identities=34% Similarity=0.537 Sum_probs=30.5
Q ss_pred EEEEEeCCccCCcchHHHHHHH----HHHHHHCCCe----eEEeeeccc
Q 009814 2 KYVLVTGGVVSGLGKGVTASSI----GVLLKACGLR----VTCIKIDPY 42 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~----g~ll~~~g~~----v~~~k~dpy 42 (524)
|-+-++|=|+||+|+|----|+ -..++..||. --.+|+||.
T Consensus 5 ~~i~l~G~VvSGlGEG~~y~sl~~Y~~qf~~~LGF~PfPGTLNi~l~~~ 53 (146)
T 2oyn_A 5 KLMIIEGEVVSGLGEGRYFLSLPPYKEIFKKILGFEPYEGTLNLKLDRE 53 (146)
T ss_dssp CEEEEEEEEECCSSHHHHHTTSHHHHHHHHHHHSSCCCSSCEEEEEEEE
T ss_pred eEEEEEEEEEccccceEEEEeCHHHHHHHHHHhCCcCCCCcEEEEeCch
Confidence 5678999999999999988887 5666777873 234555554
No 129
>1vma_A Cell division protein FTSY; TM0570, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics; HET: CIT; 1.60A {Thermotoga maritima} SCOP: a.24.13.1 c.37.1.10
Probab=65.31 E-value=8.8 Score=38.43 Aligned_cols=40 Identities=20% Similarity=0.326 Sum_probs=36.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpyl 43 (524)
+.|.++|- +|-||=.+++.|+.+|+..|.+|.++-.|+|-
T Consensus 105 ~vi~ivG~--~GsGKTTl~~~LA~~l~~~g~kV~lv~~D~~r 144 (306)
T 1vma_A 105 FVIMVVGV--NGTGKTTSCGKLAKMFVDEGKSVVLAAADTFR 144 (306)
T ss_dssp EEEEEECC--TTSSHHHHHHHHHHHHHHTTCCEEEEEECTTC
T ss_pred eEEEEEcC--CCChHHHHHHHHHHHHHhcCCEEEEEcccccc
Confidence 57889983 99999999999999999999999999999863
No 130
>2pbr_A DTMP kinase, thymidylate kinase; transferase, nucleotide biosynthesis, TMP-binding, A binding, structural genomics, NPPSFA; 1.96A {Aquifex aeolicus}
Probab=64.26 E-value=6.2 Score=35.02 Aligned_cols=33 Identities=27% Similarity=0.272 Sum_probs=28.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~ 36 (524)
+.|++||+ +|-||...+.-|...|.+.|+.|..
T Consensus 1 ~~I~l~G~--~GsGKsT~~~~L~~~l~~~g~~~i~ 33 (195)
T 2pbr_A 1 MLIAFEGI--DGSGKTTQAKKLYEYLKQKGYFVSL 33 (195)
T ss_dssp CEEEEECS--TTSCHHHHHHHHHHHHHHTTCCEEE
T ss_pred CEEEEECC--CCCCHHHHHHHHHHHHHHCCCeEEE
Confidence 46899998 6779999999999999888987654
No 131
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=64.21 E-value=5 Score=37.70 Aligned_cols=34 Identities=26% Similarity=0.571 Sum_probs=25.7
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~d 40 (524)
||-|+||||- +|||+.+ .+.|.++|++|.+.-.+
T Consensus 1 mk~vlVTGas-~gIG~~~-----a~~l~~~G~~V~~~~r~ 34 (257)
T 1fjh_A 1 MSIIVISGCA-TGIGAAT-----RKVLEAAGHQIVGIDIR 34 (257)
T ss_dssp CCEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCC-CHHHHHH-----HHHHHHCCCEEEEEeCC
Confidence 7899999984 7777654 45677789999886443
No 132
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=63.59 E-value=5 Score=38.07 Aligned_cols=31 Identities=29% Similarity=0.326 Sum_probs=24.0
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
||-++||||- +|||+.+ .+.|.++|++|.+.
T Consensus 1 Mk~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~ 31 (254)
T 1zmt_A 1 MSTAIVTNVK-HFGGMGS-----ALRLSEAGHTVACH 31 (254)
T ss_dssp -CEEEESSTT-STTHHHH-----HHHHHHTTCEEEEC
T ss_pred CeEEEEeCCC-chHHHHH-----HHHHHHCCCEEEEE
Confidence 7899999996 8999864 45677789988765
No 133
>2px0_A Flagellar biosynthesis protein FLHF; SRP GTPase, flagellum, protein transport, biosynthetic protein; HET: GNP; 3.00A {Bacillus subtilis} PDB: 2px3_A* 3syn_A*
Probab=63.03 E-value=7.4 Score=38.61 Aligned_cols=39 Identities=26% Similarity=0.492 Sum_probs=34.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHH-CCCeeEEeeeccc
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKA-CGLRVTCIKIDPY 42 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~-~g~~v~~~k~dpy 42 (524)
+.|.++|- +|-||=.+++.|+.+|+. +|.+|.++-.|||
T Consensus 106 ~vi~lvG~--~GsGKTTl~~~LA~~l~~~~G~~V~lv~~D~~ 145 (296)
T 2px0_A 106 KYIVLFGS--TGAGKTTTLAKLAAISMLEKHKKIAFITTDTY 145 (296)
T ss_dssp SEEEEEES--TTSSHHHHHHHHHHHHHHTTCCCEEEEECCCS
T ss_pred cEEEEECC--CCCCHHHHHHHHHHHHHHhcCCEEEEEecCcc
Confidence 35677774 799999999999999995 8999999999997
No 134
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=61.32 E-value=9.7 Score=37.93 Aligned_cols=94 Identities=26% Similarity=0.266 Sum_probs=48.1
Q ss_pred eEEEEEeccCCC--cchHHHHHHHHHHcCCceeEEeeeEEeeCCCcc-----ccccC--C-ChhhhhHHHHhccCCCEEE
Q 009814 298 VRIAMVGKYTGL--SDAYLSILKALLHASVDLRKKLVIDWIPACDLE-----DATEK--E-NPDAYKAAWKLLKGADGIL 367 (524)
Q Consensus 298 v~IaiVGkY~~~--~day~SI~~aL~~ag~~~~v~v~i~~i~s~~le-----~~~~~--~-~p~~y~~~~~~l~~~DGIl 367 (524)
.+|+++.+...- ......+.+.|+..|+++.+.... ++.+. ..... . ....+........++|-|+
T Consensus 5 ~ki~iI~n~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~vi 80 (307)
T 1u0t_A 5 RSVLLVVHTGRDEATETARRVEKVLGDNKIALRVLSAE----AVDRGSLHLAPDDMRAMGVEIEVVDADQHAADGCELVL 80 (307)
T ss_dssp CEEEEEESSSGGGGSHHHHHHHHHHHTTTCEEEEEC---------------------------------------CCCEE
T ss_pred CEEEEEEeCCCHHHHHHHHHHHHHHHHCCCEEEEecch----hhhhhcccccccccccccccccccccccccccCCCEEE
Confidence 368888776531 123456778888888876553111 11110 00000 0 0000000001235689999
Q ss_pred ECCCCCCCchhHHHHHHHHHHHcCCCEEEEhHh
Q 009814 368 VPGGFGNRGVQGKILAAKYAREHRIPYLGICLG 400 (524)
Q Consensus 368 lpGGfG~rg~eg~i~air~are~~iP~LGICLG 400 (524)
+-||=| -...+++.+...++|+|||=+|
T Consensus 81 ~~GGDG-----T~l~a~~~~~~~~~pvlgi~~G 108 (307)
T 1u0t_A 81 VLGGDG-----TFLRAAELARNASIPVLGVNLG 108 (307)
T ss_dssp EEECHH-----HHHHHHHHHHHHTCCEEEEECS
T ss_pred EEeCCH-----HHHHHHHHhccCCCCEEEEeCC
Confidence 988733 3566777777788999999776
No 135
>1j8m_F SRP54, signal recognition 54 kDa protein; signaling protein; 2.00A {Acidianus ambivalens} SCOP: a.24.13.1 c.37.1.10 PDB: 1j8y_F
Probab=59.81 E-value=11 Score=37.42 Aligned_cols=40 Identities=30% Similarity=0.502 Sum_probs=35.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpyl 43 (524)
+.|.++| .+|.||=.+++.|+..|..+|.+|.++-.|||-
T Consensus 99 ~vi~i~G--~~G~GKTT~~~~la~~~~~~g~~v~l~~~D~~r 138 (297)
T 1j8m_F 99 YVIMLVG--VQGTGKTTTAGKLAYFYKKKGFKVGLVGADVYR 138 (297)
T ss_dssp EEEEEEC--SSCSSTTHHHHHHHHHHHHTTCCEEEEECCCSS
T ss_pred eEEEEEC--CCCCCHHHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 4677776 499999999999999999999999999999974
No 136
>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*
Probab=59.75 E-value=23 Score=32.08 Aligned_cols=94 Identities=16% Similarity=0.129 Sum_probs=54.0
Q ss_pred eEEEEEeccCCCc-c--hHHHHHHHHHHcCCceeEEeeeEEeeCCCccccc---cCCChhhhhHHHHhccCCCEEEECCC
Q 009814 298 VRIAMVGKYTGLS-D--AYLSILKALLHASVDLRKKLVIDWIPACDLEDAT---EKENPDAYKAAWKLLKGADGILVPGG 371 (524)
Q Consensus 298 v~IaiVGkY~~~~-d--ay~SI~~aL~~ag~~~~v~v~i~~i~s~~le~~~---~~~~p~~y~~~~~~l~~~DGIllpGG 371 (524)
++|=+.|...... + .|..+.+.|+..| .+ . . .|+..+.++... ..+...-|....+.+..+|.||.-..
T Consensus 3 mkIYlAGP~f~~~e~~~~~~~i~~~L~~~G-~V--l-~-~hv~~~~l~~~g~~~~~~~~~i~~~d~~~i~~aD~vvA~l~ 77 (152)
T 4fyk_A 3 RSVYFCGSIRGGREDQALYARIVSRLRRYG-KV--L-T-EHVADAELEPLGEEAAGGDQFIHEQNLNWLQQADVVVAEVT 77 (152)
T ss_dssp CEEEEECCSTTCCTTHHHHHHHHHHHTTTS-EE--C-C-CC-------------CCCHHHHHHHHHHHHHHCSEEEEECS
T ss_pred ceEEEECCCCCcHHHHHHHHHHHHHHHHcC-cc--c-c-cccCchhhhhccccccCCHHHHHHHHHHHHHHCCEEEEeCC
Confidence 5788888775432 2 5678899999988 42 1 1 345443332211 01222234333445789999876432
Q ss_pred CCCCchhHHHHHHHHHHHcCCCEEEEhH
Q 009814 372 FGNRGVQGKILAAKYAREHRIPYLGICL 399 (524)
Q Consensus 372 fG~rg~eg~i~air~are~~iP~LGICL 399 (524)
....|..-.+-+|...++|+++.|.
T Consensus 78 ---~~d~Gt~~EiG~A~algkPV~~l~~ 102 (152)
T 4fyk_A 78 ---QPSLGVGYELGRAVALGKPILCLFR 102 (152)
T ss_dssp ---SCCHHHHHHHHHHHHTTCCEEEEEC
T ss_pred ---CCCCCHHHHHHHHHHcCCeEEEEEe
Confidence 2234556677889999999999876
No 137
>3ez2_A Plasmid partition protein A; type IA, DNA binding, winged-HTH, DNA bindin; HET: ADP EPE; 2.05A {Escherichia coli} PDB: 3ez6_A* 3ez7_A
Probab=59.34 E-value=11 Score=38.32 Aligned_cols=43 Identities=23% Similarity=0.392 Sum_probs=36.0
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHH------CCCeeEEeeeccccc
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKA------CGLRVTCIKIDPYLN 44 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~------~g~~v~~~k~dpyln 44 (524)
+|-|.|++|- -|.||=.+|++++..|.. +|+||-++-+||.-|
T Consensus 108 ~~vIav~s~K-GGvGKTT~a~nLA~~La~~~~~~~~g~rVlliD~D~q~~ 156 (398)
T 3ez2_A 108 AYVIFISNLK-GGVSKTVSTVSLAHAMRAHPHLLMEDLRILVIDLDPQSS 156 (398)
T ss_dssp CEEEEECCSS-SSSSHHHHHHHHHHHHHHCTTTGGGCCCEEEEEECTTCH
T ss_pred CeEEEEEeCC-CCccHHHHHHHHHHHHHhcchhhcCCCeEEEEeCCCCCC
Confidence 3667777654 789999999999999984 799999999999654
No 138
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=58.12 E-value=8 Score=33.31 Aligned_cols=39 Identities=21% Similarity=0.271 Sum_probs=31.0
Q ss_pred hccCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 009814 359 LLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (524)
Q Consensus 359 ~l~~~DGIllpGGfG~rg~eg~i~air~are~~iP~LGI 397 (524)
.++.+|++++.-|.-...-+..-..|+.|.+.++|++||
T Consensus 35 ~I~~~~~vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV 73 (111)
T 1eiw_A 35 TPEDADAVIVLAGLWGTRRDEILGAVDLARKSSKPIITV 73 (111)
T ss_dssp CSSSCSEEEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEE
T ss_pred ccccCCEEEEEeCCCcCCChHHHHHHHHHHHcCCCEEEE
Confidence 467899998777766655556667788899999999999
No 139
>1rz3_A Hypothetical protein rbstp0775; MCSG, structural genomics, PSI, protein structure initiative; 1.90A {Geobacillus stearothermophilus} SCOP: c.37.1.6
Probab=57.88 E-value=13 Score=34.04 Aligned_cols=40 Identities=23% Similarity=0.293 Sum_probs=35.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpyl 43 (524)
..|.|+|+ ||-||-..+..|..+|+..|.+|...-.|.+.
T Consensus 23 ~~i~i~G~--~GsGKstl~~~l~~~~~~~~~~v~~~~~d~~~ 62 (201)
T 1rz3_A 23 LVLGIDGL--SRSGKTTLANQLSQTLREQGISVCVFHMDDHI 62 (201)
T ss_dssp EEEEEEEC--TTSSHHHHHHHHHHHHHHTTCCEEEEEGGGGC
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHhhcCCeEEEeccCccc
Confidence 56889997 88899999999999999999999888888764
No 140
>1nn5_A Similar to deoxythymidylate kinase (thymidylate K; P-loop, D4TMP, transferase; HET: 2DT ANP; 1.50A {Homo sapiens} SCOP: c.37.1.1 PDB: 1e2e_A* 1e2d_A* 1e2g_A* 1e2q_A* 1e99_A* 1e9a_A* 1e9b_A* 1nmx_A* 1nmz_A* 1nn0_A* 1nn1_A* 1e2f_A* 1nn3_A* 2xx3_A* 1e9c_A* 1e9d_A* 1e9e_A* 1e98_A* 1nmy_A* 1e9f_A*
Probab=57.30 E-value=11 Score=34.03 Aligned_cols=34 Identities=21% Similarity=0.298 Sum_probs=29.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
+.|++||+ +|-||...+.-|...|...|++|...
T Consensus 10 ~~I~l~G~--~GsGKsT~~~~L~~~l~~~~~~v~~~ 43 (215)
T 1nn5_A 10 ALIVLEGV--DRAGKSTQSRKLVEALCAAGHRAELL 43 (215)
T ss_dssp CEEEEEES--TTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred cEEEEECC--CCCCHHHHHHHHHHHHHHcCCcEEEe
Confidence 57999996 78899999999999999999998543
No 141
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=56.67 E-value=16 Score=35.69 Aligned_cols=89 Identities=21% Similarity=0.156 Sum_probs=48.6
Q ss_pred eEEEEEeccCC--CcchHHHHHHHHHHcCCceeEEeeeEEeeCCCccccccCCChhhhhHHHHhccCCCEEEECCCCCCC
Q 009814 298 VRIAMVGKYTG--LSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR 375 (524)
Q Consensus 298 v~IaiVGkY~~--~~day~SI~~aL~~ag~~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~l~~~DGIllpGGfG~r 375 (524)
.+|+++.+... .......+.+.|+..|+++.+... .++.+..... + .. .......++|.|++-||=|
T Consensus 6 kki~ii~np~~~~~~~~~~~i~~~l~~~g~~v~~~~~----~~~~~~~~~~---~-~~-~~~~~~~~~D~vi~~GGDG-- 74 (292)
T 2an1_A 6 KCIGIVGHPRHPTALTTHEMLYRWLCDQGYEVIVEQQ----IAHELQLKNV---P-TG-TLAEIGQQADLAVVVGGDG-- 74 (292)
T ss_dssp CEEEEECC-------CHHHHHHHHHHHTTCEEEEEHH----HHHHTTCSSC---C-EE-CHHHHHHHCSEEEECSCHH--
T ss_pred cEEEEEEcCCCHHHHHHHHHHHHHHHHCCCEEEEecc----hhhhcccccc---c-cc-chhhcccCCCEEEEEcCcH--
Confidence 46888865432 223456778899999987654310 0000000000 0 00 0011234689999999833
Q ss_pred chhHHHHHHHHHHHcCCCEEEEhHh
Q 009814 376 GVQGKILAAKYAREHRIPYLGICLG 400 (524)
Q Consensus 376 g~eg~i~air~are~~iP~LGICLG 400 (524)
-..++++.+.+.++|+|||=+|
T Consensus 75 ---T~l~a~~~~~~~~~P~lGI~~G 96 (292)
T 2an1_A 75 ---NMLGAARTLARYDINVIGINRG 96 (292)
T ss_dssp ---HHHHHHHHHTTSSCEEEEBCSS
T ss_pred ---HHHHHHHHhhcCCCCEEEEECC
Confidence 3556677776778999999765
No 142
>2j37_W Signal recognition particle 54 kDa protein (SRP54); ribosome, SRP, translation/RNA; 8.00A {Canis SP} PDB: 1wgw_A
Probab=56.45 E-value=14 Score=39.82 Aligned_cols=40 Identities=23% Similarity=0.348 Sum_probs=35.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpyl 43 (524)
+.|.++|- .|.||=.+++.|+..|+.+|.+|.++-.|||-
T Consensus 102 ~vI~ivG~--~GvGKTTl~~kLA~~l~~~G~kVllVd~D~~r 141 (504)
T 2j37_W 102 NVIMFVGL--QGSGKTTTCSKLAYYYQRKGWKTCLICADTFR 141 (504)
T ss_dssp EEEEEECS--TTSSHHHHHHHHHHHHHHTTCCEEEEEECCSS
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHHhCCCeEEEEeccccc
Confidence 45777754 79999999999999999999999999999974
No 143
>3a4m_A L-seryl-tRNA(SEC) kinase; P-loop motif, walker A motif, ATP binding motif, ATP- binding, nucleotide-binding, transferase; HET: ADP; 1.79A {Methanocaldococcus jannaschii} PDB: 3a4l_A* 3a4n_A 3am1_A* 3add_A* 3adc_A* 3adb_A*
Probab=55.66 E-value=11 Score=36.27 Aligned_cols=39 Identities=21% Similarity=0.400 Sum_probs=31.8
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dp 41 (524)
|+.|+++|. +|-||...|..|...|...|+.+..+-.|.
T Consensus 4 ~~lIvl~G~--pGSGKSTla~~La~~L~~~g~~~i~~~~D~ 42 (260)
T 3a4m_A 4 IMLIILTGL--PGVGKSTFSKNLAKILSKNNIDVIVLGSDL 42 (260)
T ss_dssp CEEEEEECC--TTSSHHHHHHHHHHHHHHTTCCEEEECTHH
T ss_pred CEEEEEEcC--CCCCHHHHHHHHHHHHHhCCCEEEEECchH
Confidence 578999997 899999999999999998998775433343
No 144
>3ez9_A Para; DNA binding, winged-HTH, partition, biosynthetic protein; 2.80A {Salmonella enterica subsp} PDB: 3ezf_A
Probab=54.96 E-value=9.6 Score=38.98 Aligned_cols=45 Identities=22% Similarity=0.365 Sum_probs=30.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHH------HCCCeeEEeeecccccCC
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLK------ACGLRVTCIKIDPYLNTD 46 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~------~~g~~v~~~k~dpyln~d 46 (524)
+|-|.|++| --|.||=.+|++|+..|. .+|++|-++-+||.-|..
T Consensus 111 ~~vIav~s~-KGGvGKTT~a~nLA~~LA~~g~~~~~g~rVlliD~D~~~~l~ 161 (403)
T 3ez9_A 111 PYVIFVVNL-KGGVSKTVSTVTLAHALRVHQDLLRHDLRILVIDLDPQASST 161 (403)
T ss_dssp CEEEEECCC---------CHHHHHHHHHSCGGGGGGCCCEEEEEESSSSGGG
T ss_pred ceEEEEEcC-CCCchHHHHHHHHHHHHHhcchhhcCCCeEEEEeCCCCCChh
Confidence 466777754 367899999999999998 689999999999976644
No 145
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=54.57 E-value=8.4 Score=35.72 Aligned_cols=33 Identities=27% Similarity=0.387 Sum_probs=24.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
+|.++||||- +|||+. +.+.|-++|++|.+.-.
T Consensus 2 ~k~vlITGas-~gIG~~-----ia~~l~~~G~~V~~~~r 34 (235)
T 3l77_A 2 MKVAVITGAS-RGIGEA-----IARALARDGYALALGAR 34 (235)
T ss_dssp CCEEEEESCS-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 5889999985 777764 45667788998877543
No 146
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=53.56 E-value=11 Score=38.81 Aligned_cols=39 Identities=23% Similarity=0.219 Sum_probs=33.7
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpy 42 (524)
|+++|++| -.|.||=.+|++++..|..+|.||-++-. |-
T Consensus 2 ~~i~~~~g--kGG~GKTt~a~~la~~la~~g~~vllvd~-~~ 40 (374)
T 3igf_A 2 ALILTFLG--KSGVARTKIAIAAAKLLASQGKRVLLAGL-AE 40 (374)
T ss_dssp CEEEEEEC--SBHHHHHHHHHHHHHHHHHTTCCEEEEEC-SC
T ss_pred cEEEEEeC--CCCCcHHHHHHHHHHHHHHCCCCeEEEeC-CC
Confidence 46777776 45999999999999999999999999987 63
No 147
>4edh_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology; HET: TMP ADP; 1.32A {Pseudomonas aeruginosa PAO1} PDB: 4e5u_A* 4esh_A* 4gmd_A* 3uwk_A* 3uwo_A* 3uxm_A*
Probab=53.54 E-value=15 Score=34.49 Aligned_cols=35 Identities=23% Similarity=0.416 Sum_probs=31.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
++|.+.|. +|-||+..+.-|...|+.+|++|...+
T Consensus 7 ~~i~~eG~--~gsGKsT~~~~l~~~l~~~~~~v~~~~ 41 (213)
T 4edh_A 7 LFVTLEGP--EGAGKSTNRDYLAERLRERGIEVQLTR 41 (213)
T ss_dssp EEEEEECS--TTSSHHHHHHHHHHHHHTTTCCEEEEE
T ss_pred eEEEEEcC--CCCCHHHHHHHHHHHHHHcCCCccccc
Confidence 68999985 799999999999999999999986554
No 148
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}
Probab=52.79 E-value=7.2 Score=36.62 Aligned_cols=35 Identities=43% Similarity=0.606 Sum_probs=25.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~d 40 (524)
+|-++||||- ||||+.++- .|++..|.+|...-.+
T Consensus 4 ~k~vlITGas-~gIG~~~a~----~l~~~~g~~v~~~~~~ 38 (244)
T 4e4y_A 4 MANYLVTGGS-KGIGKAVVE----LLLQNKNHTVINIDIQ 38 (244)
T ss_dssp CEEEEEETTT-SHHHHHHHH----HHTTSTTEEEEEEESS
T ss_pred CCeEEEeCCC-ChHHHHHHH----HHHhcCCcEEEEeccc
Confidence 5889999986 788886553 3444489988876544
No 149
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=52.37 E-value=14 Score=33.52 Aligned_cols=34 Identities=32% Similarity=0.426 Sum_probs=25.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dp 41 (524)
|| |+||||- |-+.+.+.+.|.++|++|..+--+|
T Consensus 1 Mk-ilVtGat------G~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 1 MK-IAVLGAT------GRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp CE-EEEETTT------SHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CE-EEEEcCC------CHHHHHHHHHHHHCCCEEEEEEecc
Confidence 67 9999974 4444566677778899999886554
No 150
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=52.35 E-value=9.5 Score=35.83 Aligned_cols=33 Identities=30% Similarity=0.470 Sum_probs=24.8
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
+|-++||||- ||||+.+ .+.|.++|++|.+.-.
T Consensus 3 ~k~vlVTGas-~GIG~a~-----a~~l~~~G~~V~~~~r 35 (235)
T 3l6e_A 3 LGHIIVTGAG-SGLGRAL-----TIGLVERGHQVSMMGR 35 (235)
T ss_dssp CCEEEEESTT-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CCEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEEEC
Confidence 4789999986 7888754 4667788999877643
No 151
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=52.02 E-value=14 Score=38.73 Aligned_cols=57 Identities=18% Similarity=0.235 Sum_probs=39.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCC
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDG 64 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtmsp~~hgevfv~~dg 64 (524)
|.|-||| +=||+.|++=|+.+|++.|++.+. ++.--+| +.|...-.+..+++|.+=|
T Consensus 119 ~vI~VTG----TnGKTTTt~ml~~iL~~~G~~p~~-~igg~~~-~~~~~~~~~~~d~~VlE~~ 175 (475)
T 1p3d_A 119 HGIAVAG----THGKTTTTAMISMIYTQAKLDPTF-VNGGLVK-SAGKNAHLGASRYLIAEAD 175 (475)
T ss_dssp EEEEEES----SSCHHHHHHHHHHHHHHTTCCCEE-EEEEEET-TTTEEEECCSSSEEEEECC
T ss_pred CEEEEEC----CCCHHHHHHHHHHHHHhCCCCCEE-EECCccc-ccccccccCCCCEEEEEec
Confidence 6788888 569999999999999999998543 3443334 3332111134578888876
No 152
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=51.97 E-value=17 Score=37.75 Aligned_cols=55 Identities=29% Similarity=0.451 Sum_probs=40.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCcc-----ccceEEEccCCccccCC
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPF-----EHGEVFVLDDGGEVDLD 70 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtmsp~-----~hgevfv~~dg~e~dld 70 (524)
|.|-||| +=||+.|++=|+.+|++.|++|...- |+. .|+ +.++++|.+=|. -+||
T Consensus 105 ~vI~VTG----TnGKTTT~~ml~~iL~~~g~~~~~~g-----nig----~~~~~~~~~~~d~~VlE~~~-~~l~ 164 (439)
T 2x5o_A 105 PIVAITG----SNGKSTVTTLVGEMAKAAGVNVGVGG-----NIG----LPALMLLDDECELYVLELSS-FQLE 164 (439)
T ss_dssp CEEEEEC----SSSHHHHHHHHHHHHHHTTCCEEEEE-----SSS----BCHHHHCCTTCCEEEEECCH-HHHH
T ss_pred CEEEEEC----CCCHHHHHHHHHHHHHhcCCCEEEec-----ccC----HHHHHHhCCCCCEEEEECCc-hhhc
Confidence 5788888 56999999999999999999987542 321 122 456888888664 4443
No 153
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=51.92 E-value=7.9 Score=35.86 Aligned_cols=31 Identities=26% Similarity=0.544 Sum_probs=23.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
+|.|+||||- +|||+.++ +.|.++|++|.++
T Consensus 1 ~k~vlITGas-ggiG~~~a-----~~l~~~G~~v~~~ 31 (245)
T 2ph3_A 1 MRKALITGAS-RGIGRAIA-----LRLAEDGFALAIH 31 (245)
T ss_dssp CCEEEETTTT-SHHHHHHH-----HHHHTTTCEEEEE
T ss_pred CCEEEEeCCC-chHHHHHH-----HHHHHCCCEEEEE
Confidence 6889999994 77777554 5566788887764
No 154
>1w78_A FOLC bifunctional protein; DHFS, dihydrofolate synthase, synthase, ATP-binding, folate biosynthesis, ligase, multifunctional enzyme; HET: KCX PD8 ADP; 1.82A {Escherichia coli} PDB: 1w7k_A*
Probab=51.54 E-value=15 Score=37.86 Aligned_cols=32 Identities=31% Similarity=0.436 Sum_probs=28.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
|.|-|||- =|||.|++=|..+|++.|++|...
T Consensus 50 ~vI~VTGT----nGKtTT~~~l~~iL~~~G~~~g~~ 81 (422)
T 1w78_A 50 FVFTVAGT----NGKGTTCRTLESILMAAGYKVGVY 81 (422)
T ss_dssp EEEEEECS----SCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred cEEEEeCC----cChHHHHHHHHHHHHHCCCCEEEE
Confidence 67888984 699999999999999999998765
No 155
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=51.43 E-value=11 Score=32.14 Aligned_cols=33 Identities=18% Similarity=0.198 Sum_probs=26.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dp 41 (524)
+.|+|+|+ |-+..++.+.|..+|++|..+-.||
T Consensus 7 ~~v~I~G~-------G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGS-------EAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECC-------SHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECC-------CHHHHHHHHHHHHCCCeEEEEECCH
Confidence 45777775 4477889999999999999887664
No 156
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=51.39 E-value=17 Score=32.75 Aligned_cols=34 Identities=32% Similarity=0.313 Sum_probs=24.7
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dp 41 (524)
|| |+||||- |-+.+.+.+.|.++|++|..+--+|
T Consensus 1 Mk-vlVtGat------G~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 1 MK-IGIIGAT------GRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp CE-EEEETTT------SHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred Ce-EEEEcCC------chhHHHHHHHHHhCCCEEEEEEcCc
Confidence 56 8999974 3444566677888899999876553
No 157
>1kht_A Adenylate kinase; phosphotransferase, signaling protein, transferase; HET: AMP; 2.50A {Methanococcus voltae} SCOP: c.37.1.1 PDB: 3h86_B* 1ki9_A
Probab=51.20 E-value=14 Score=32.63 Aligned_cols=34 Identities=26% Similarity=0.341 Sum_probs=27.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
++|+++|. +|-||...+..|...|...|++...+
T Consensus 4 ~~I~i~G~--~GsGKsT~~~~L~~~l~~~g~~~~~i 37 (192)
T 1kht_A 4 KVVVVTGV--PGVGSTTSSQLAMDNLRKEGVNYKMV 37 (192)
T ss_dssp CEEEEECC--TTSCHHHHHHHHHHHHHTTTCCCEEE
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHHhcCcceEEE
Confidence 48999995 89999999999999888877544333
No 158
>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}
Probab=50.94 E-value=11 Score=35.36 Aligned_cols=31 Identities=29% Similarity=0.278 Sum_probs=23.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
+|-++||||- +|||+.++ +.|.++|++|.+.
T Consensus 1 ~k~vlVTGas-~gIG~~ia-----~~l~~~G~~V~~~ 31 (244)
T 1zmo_A 1 MVIALVTHAR-HFAGPAAV-----EALTQDGYTVVCH 31 (244)
T ss_dssp -CEEEESSTT-STTHHHHH-----HHHHHTTCEEEEC
T ss_pred CCEEEEECCC-ChHHHHHH-----HHHHHCCCEEEEe
Confidence 4789999985 89998654 5566789988664
No 159
>1jbw_A Folylpolyglutamate synthase; FPGS folate AMPPCP ternary complex, ligase; HET: KCX ACQ TMF; 1.85A {Lactobacillus casei} SCOP: c.59.1.2 c.72.2.2 PDB: 1fgs_A* 1jbv_A* 2gca_A 2gc5_A* 2gc6_A* 2gcb_A
Probab=49.93 E-value=15 Score=38.03 Aligned_cols=32 Identities=44% Similarity=0.657 Sum_probs=28.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
|.|-|||- =|||.|++=|..+|++.|++|...
T Consensus 40 ~vI~VtGT----nGKtTT~~~l~~iL~~~G~~vg~~ 71 (428)
T 1jbw_A 40 RYIHVTGT----NGKGSAANAIAHVLEASGLTVGLY 71 (428)
T ss_dssp CEEEEECS----SCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred cEEEEECC----CChHHHHHHHHHHHHHCCCCEEEE
Confidence 57888884 699999999999999999998754
No 160
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=49.47 E-value=57 Score=30.02 Aligned_cols=33 Identities=15% Similarity=0.236 Sum_probs=22.4
Q ss_pred cC-CCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 009814 361 KG-ADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (524)
Q Consensus 361 ~~-~DGIllpGGfG~rg~eg~i~air~are~~iP~LGI 397 (524)
.+ +|||++.+.. ... ....++.+.+.++|+.-+
T Consensus 57 ~~~vdgii~~~~~-~~~---~~~~~~~~~~~~ipvV~~ 90 (276)
T 3ksm_A 57 QAPPDALILAPNS-AED---LTPSVAQYRARNIPVLVV 90 (276)
T ss_dssp HSCCSEEEECCSS-TTT---THHHHHHHHHTTCCEEEE
T ss_pred hCCCCEEEEeCCC-HHH---HHHHHHHHHHCCCcEEEE
Confidence 46 9999998732 112 234567778889999766
No 161
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=49.38 E-value=17 Score=38.46 Aligned_cols=57 Identities=19% Similarity=0.332 Sum_probs=39.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCC
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDG 64 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtmsp~~hgevfv~~dg 64 (524)
|.|-||| +=||+.|++=|+.+|++.|++.+. ++.--+| +.|...-.+..+++|.+=|
T Consensus 120 ~vI~VTG----TnGKTTTt~ml~~iL~~~G~~p~~-~igg~~~-~~~~~~~~~~~d~~VlE~~ 176 (491)
T 2f00_A 120 HGIAIAG----THGKTTTTAMVSSIYAEAGLDPTF-VNGGLVK-AAGVHARLGHGRYLIAEAD 176 (491)
T ss_dssp EEEEEES----SSCHHHHHHHHHHHHHHTTCCCEE-EEEEEET-TTTEEEECCSSSEEEEECC
T ss_pred CEEEEEC----CCCHHHHHHHHHHHHHhCCCCCEE-EECCeec-cccccccCCCCCEEEEEeC
Confidence 6788888 569999999999999999998533 3333333 3332111234578888876
No 162
>2wwf_A Thymidilate kinase, putative; transferase, malaria; HET: TMP ADP; 1.89A {Plasmodium falciparum} PDB: 2wwg_A* 2wwh_A* 2wwi_A*
Probab=49.05 E-value=18 Score=32.56 Aligned_cols=34 Identities=21% Similarity=0.319 Sum_probs=29.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
+.|++||+ +|-||...+.-|...|...+++|...
T Consensus 11 ~~I~l~G~--~GsGKST~~~~L~~~l~~~~~~~~~~ 44 (212)
T 2wwf_A 11 KFIVFEGL--DRSGKSTQSKLLVEYLKNNNVEVKHL 44 (212)
T ss_dssp CEEEEEES--TTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEEcC--CCCCHHHHHHHHHHHHHHcCCcEEEE
Confidence 57999997 68899999999999999999988543
No 163
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=48.86 E-value=13 Score=35.17 Aligned_cols=34 Identities=26% Similarity=0.406 Sum_probs=25.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dp 41 (524)
|.++||||- +|||+. +.+.|.++|++|.+.-.++
T Consensus 23 k~vlITGas-~gIG~~-----la~~l~~~G~~V~~~~r~~ 56 (251)
T 3orf_A 23 KNILVLGGS-GALGAE-----VVKFFKSKSWNTISIDFRE 56 (251)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEESSC
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEeCCc
Confidence 789999996 677764 5567778899998875443
No 164
>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national P protein structural and functional analyses; 2.10A {Aeropyrum pernix}
Probab=48.79 E-value=17 Score=32.36 Aligned_cols=39 Identities=33% Similarity=0.344 Sum_probs=33.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpy 42 (524)
++|+++|- +|-||-..+..|...|...|++|..+.-|.+
T Consensus 14 ~~i~l~G~--~GsGKsT~~~~L~~~l~~~~~~~~~~~~d~~ 52 (186)
T 2yvu_A 14 IVVWLTGL--PGSGKTTIATRLADLLQKEGYRVEVLDGDWA 52 (186)
T ss_dssp EEEEEECC--TTSSHHHHHHHHHHHHHHTTCCEEEEEHHHH
T ss_pred cEEEEEcC--CCCCHHHHHHHHHHHHHhcCCeEEEeeHHHH
Confidence 57889985 8999999999999999999999888766654
No 165
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=48.32 E-value=11 Score=35.41 Aligned_cols=32 Identities=34% Similarity=0.441 Sum_probs=24.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
|.++||||- +|||+.+ .+.|..+|++|.+.-.
T Consensus 8 k~~lVTGas-~gIG~ai-----a~~l~~~G~~V~~~~r 39 (247)
T 2jah_A 8 KVALITGAS-SGIGEAT-----ARALAAEGAAVAIAAR 39 (247)
T ss_dssp CEEEEESCS-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEEEC
Confidence 789999985 7888765 4567778999877643
No 166
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=47.52 E-value=11 Score=35.54 Aligned_cols=31 Identities=39% Similarity=0.534 Sum_probs=23.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
+|.++||||- +|||+. +.+.|-++|++|.+.
T Consensus 7 ~k~vlVTGas-~gIG~~-----~a~~l~~~G~~v~~~ 37 (264)
T 3i4f_A 7 VRHALITAGT-KGLGKQ-----VTEKLLAKGYSVTVT 37 (264)
T ss_dssp CCEEEETTTT-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred cCEEEEeCCC-chhHHH-----HHHHHHHCCCEEEEE
Confidence 4789999985 677764 456677889988764
No 167
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=47.39 E-value=11 Score=35.03 Aligned_cols=32 Identities=28% Similarity=0.441 Sum_probs=24.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
|.++||||- +|||+.+ .+.|-++|++|.+.=.
T Consensus 15 k~vlITGas-~gIG~~i-----a~~l~~~G~~V~~~~r 46 (247)
T 3i1j_A 15 RVILVTGAA-RGIGAAA-----ARAYAAHGASVVLLGR 46 (247)
T ss_dssp CEEEESSTT-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-ChHHHHH-----HHHHHHCCCEEEEEec
Confidence 789999995 7888754 4667788999877643
No 168
>3nrs_A Dihydrofolate:folylpolyglutamate synthetase; structural genomics, center for structural genomics of infec diseases, csgid; HET: TLA MES; 1.80A {Yersinia pestis} PDB: 3n2a_A* 3pyz_A* 3qcz_A*
Probab=47.23 E-value=16 Score=38.15 Aligned_cols=32 Identities=41% Similarity=0.578 Sum_probs=28.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
|.|=|||- =|||-|++-|..+|++.||+|-+.
T Consensus 53 ~vI~VtGT----NGKgSt~~~l~~iL~~~G~~vg~~ 84 (437)
T 3nrs_A 53 KIFTVAGT----NGKGTTCCTLEAILLAAGLRVGVY 84 (437)
T ss_dssp EEEEEECS----SSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEECC----cChHHHHHHHHHHHHHCCCcEEEE
Confidence 67888885 699999999999999999999653
No 169
>1j6u_A UDP-N-acetylmuramate-alanine ligase MURC; structural genomics, TM0231, JCSG, PSI, protein structure initiative; 2.30A {Thermotoga maritima} SCOP: c.5.1.1 c.59.1.1 c.72.2.1
Probab=47.21 E-value=24 Score=37.11 Aligned_cols=38 Identities=24% Similarity=0.215 Sum_probs=31.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpyln 44 (524)
|.|-||| +=||+.|++=|+.+|++.|+++.. .+-|.+|
T Consensus 115 ~vI~VTG----TnGKTTTt~ml~~iL~~~G~~~~~-~~~g~~~ 152 (469)
T 1j6u_A 115 EEFAVTG----TDGKTTTTAMVAHVLKHLRKSPTV-FLGGIMD 152 (469)
T ss_dssp CEEEEEC----SSSHHHHHHHHHHHHHHTTCCCEE-ECSSCCT
T ss_pred CEEEEEC----CCCHHHHHHHHHHHHHHcCCCceE-EECCeec
Confidence 5788888 469999999999999999999853 4566654
No 170
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=46.92 E-value=13 Score=35.58 Aligned_cols=31 Identities=23% Similarity=0.390 Sum_probs=24.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|.++||||- ||||+.+ .+.|-++|++|.+.=
T Consensus 7 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~~ 37 (274)
T 3e03_A 7 KTLFITGAS-RGIGLAI-----ALRAARDGANVAIAA 37 (274)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred cEEEEECCC-ChHHHHH-----HHHHHHCCCEEEEEe
Confidence 789999997 8888755 466777899887753
No 171
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=46.65 E-value=12 Score=36.20 Aligned_cols=33 Identities=39% Similarity=0.592 Sum_probs=26.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~d 40 (524)
|-|+||||- ||||+.+ .+.|-+.|.+|.+.-+|
T Consensus 3 K~vlVTGas-~GIG~ai-----a~~la~~Ga~V~~~~~~ 35 (247)
T 3ged_A 3 RGVIVTGGG-HGIGKQI-----CLDFLEAGDKVCFIDID 35 (247)
T ss_dssp CEEEEESTT-SHHHHHH-----HHHHHHTTCEEEEEESC
T ss_pred CEEEEecCC-CHHHHHH-----HHHHHHCCCEEEEEeCC
Confidence 789999994 8888854 56788899999886443
No 172
>3kb2_A SPBC2 prophage-derived uncharacterized protein YORR; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: G3D; 2.20A {Bacillus subtilis} SCOP: c.37.1.1 PDB: 2axp_A*
Probab=46.38 E-value=14 Score=31.87 Aligned_cols=25 Identities=20% Similarity=0.251 Sum_probs=19.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHH
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLL 27 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll 27 (524)
|+.|+++|+ ||-||...+.-|...|
T Consensus 1 M~~i~l~G~--~GsGKsT~~~~L~~~l 25 (173)
T 3kb2_A 1 MTLIILEGP--DCCFKSTVAAKLSKEL 25 (173)
T ss_dssp -CEEEEECS--SSSSHHHHHHHHHHHH
T ss_pred CeEEEEECC--CCCCHHHHHHHHHHHh
Confidence 678999995 8899988777666544
No 173
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=46.19 E-value=12 Score=35.84 Aligned_cols=32 Identities=28% Similarity=0.397 Sum_probs=24.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
|.++||||- +|||+.+ .+.|..+|++|.+.=.
T Consensus 13 k~vlITGas-~GIG~~~-----a~~L~~~G~~V~~~~r 44 (311)
T 3o26_A 13 RCAVVTGGN-KGIGFEI-----CKQLSSNGIMVVLTCR 44 (311)
T ss_dssp CEEEESSCS-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred cEEEEecCC-chHHHHH-----HHHHHHCCCEEEEEeC
Confidence 689999996 8888754 4566678998877543
No 174
>1o5z_A Folylpolyglutamate synthase/dihydrofolate synthas; TM0166, structural genomics, JC protein structure initiative; 2.10A {Thermotoga maritima} SCOP: c.59.1.2 c.72.2.2
Probab=45.91 E-value=18 Score=37.76 Aligned_cols=32 Identities=31% Similarity=0.443 Sum_probs=28.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
|.|-|||- =|||.|++=|..+|++.|++|...
T Consensus 53 ~vI~VTGT----nGKtTT~~~l~~iL~~~G~~vg~~ 84 (442)
T 1o5z_A 53 KTIHIGGT----NGKGSVANMVSNILVSQGYRVGSY 84 (442)
T ss_dssp EEEEEECS----SSHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CEEEEECC----cCHHHHHHHHHHHHHHCCCCEEEE
Confidence 67889984 699999999999999999998754
No 175
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=45.89 E-value=14 Score=34.98 Aligned_cols=32 Identities=25% Similarity=0.198 Sum_probs=24.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
|.++||||- ||||+. +.+.|-++|++|.+.-.
T Consensus 8 k~vlVTGas-~GIG~a-----ia~~l~~~G~~V~~~~r 39 (252)
T 3h7a_A 8 ATVAVIGAG-DYIGAE-----IAKKFAAEGFTVFAGRR 39 (252)
T ss_dssp CEEEEECCS-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-chHHHH-----HHHHHHHCCCEEEEEeC
Confidence 789999996 777764 45667778999887643
No 176
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=45.78 E-value=84 Score=29.32 Aligned_cols=34 Identities=21% Similarity=0.202 Sum_probs=22.5
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEEh
Q 009814 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (524)
Q Consensus 361 ~~~DGIllpGGfG~rg~eg~i~air~are~~iP~LGIC 398 (524)
.++||||+.+... .. ....++.+.+.++|+.-+.
T Consensus 68 ~~vdgiii~~~~~-~~---~~~~~~~~~~~~iPvV~~~ 101 (304)
T 3gbv_A 68 EQPDGVMFAPTVP-QY---TKGFTDALNELGIPYIYID 101 (304)
T ss_dssp TCCSEEEECCSSG-GG---THHHHHHHHHHTCCEEEES
T ss_pred cCCCEEEECCCCh-HH---HHHHHHHHHHCCCeEEEEe
Confidence 5799999987321 11 2345677777899987653
No 177
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=45.56 E-value=14 Score=35.53 Aligned_cols=33 Identities=39% Similarity=0.599 Sum_probs=25.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~d 40 (524)
|-|+||||- ||||+.+ .+.|.++|++|.+.-.+
T Consensus 15 k~vlVTGas-~GIG~ai-----a~~l~~~G~~V~~~~r~ 47 (269)
T 3vtz_A 15 KVAIVTGGS-SGIGLAV-----VDALVRYGAKVVSVSLD 47 (269)
T ss_dssp CEEEESSTT-SHHHHHH-----HHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHCCCEEEEEeCC
Confidence 779999986 7888754 45677889999876443
No 178
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=45.14 E-value=13 Score=35.79 Aligned_cols=30 Identities=40% Similarity=0.619 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
|.++||||- +|||+.+ .+.|-++|++|.+.
T Consensus 6 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~ 35 (281)
T 3zv4_A 6 EVALITGGA-SGLGRAL-----VDRFVAEGARVAVL 35 (281)
T ss_dssp CEEEEETCS-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEECCC-cHHHHHH-----HHHHHHCcCEEEEE
Confidence 789999986 7787754 46677889998874
No 179
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=44.83 E-value=23 Score=33.42 Aligned_cols=78 Identities=17% Similarity=0.248 Sum_probs=52.5
Q ss_pred EEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccCcchHHHHHHHhhhhcCCCCEEEEEeeeeeeecCCCc
Q 009814 112 QVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGE 191 (524)
Q Consensus 112 qviphit~ei~~~i~~~~~~~~d~~~~~~d~~i~eiggtvgdies~pf~ea~rq~~~~~~~~n~~~ih~~~vp~~~~~~e 191 (524)
.|||-|.|+ +.++++- ..++++|++ ++|+++.+ + +.+.+++. .| ...|||+-++--|+
T Consensus 11 piI~Avr~~--~~l~~al-------~s~~~~ifl-l~g~i~~l---~--~~v~~lk~-~~--K~v~Vh~Dli~Gls---- 68 (192)
T 3kts_A 11 SIIPAAHNQ--KDMEKIL-------ELDLTYMVM-LETHVAQL---K--ALVKYAQA-GG--KKVLLHADLVNGLK---- 68 (192)
T ss_dssp CEEEEESSS--HHHHHHT-------TSSCCEEEE-CSEETTTH---H--HHHHHHHH-TT--CEEEEEGGGEETCC----
T ss_pred CEEEEecCH--HHHHHHH-------cCCCCEEEE-ecCcHHHH---H--HHHHHHHH-cC--CeEEEecCchhccC----
Confidence 578877664 2344543 345788888 77777664 4 55555544 34 48999999988763
Q ss_pred cccCCchhhHHHhhcCCCcccEEEE
Q 009814 192 QKTKPTQHSVRGLRGQGLTPNILAC 216 (524)
Q Consensus 192 ~ktkptq~sv~~lrs~Gi~pd~lv~ 216 (524)
+-+.++.-|. .+..||+||-
T Consensus 69 ----~d~~ai~fL~-~~~~pdGIIs 88 (192)
T 3kts_A 69 ----NDDYAIDFLC-TEICPDGIIS 88 (192)
T ss_dssp ----CSHHHHHHHH-HTTCCSEEEE
T ss_pred ----CcHHHHHHHH-hCCCCCEEEe
Confidence 4566777665 4889999874
No 180
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=44.75 E-value=14 Score=35.24 Aligned_cols=32 Identities=34% Similarity=0.422 Sum_probs=23.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
|.++||||- +|||+.+ .+.|-++|++|.+.-.
T Consensus 9 k~~lVTGas-~GIG~ai-----a~~l~~~G~~V~~~~r 40 (265)
T 3lf2_A 9 AVAVVTGGS-SGIGLAT-----VELLLEAGAAVAFCAR 40 (265)
T ss_dssp CEEEEETCS-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-ChHHHHH-----HHHHHHCCCEEEEEeC
Confidence 789999985 7777654 4667778998877543
No 181
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=44.71 E-value=17 Score=34.36 Aligned_cols=31 Identities=29% Similarity=0.409 Sum_probs=23.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|-++||||- +|||+.+ .+.|.++|++|.+.-
T Consensus 1 k~vlVTGas-~gIG~ai-----a~~l~~~G~~V~~~~ 31 (248)
T 3asu_A 1 MIVLVTGAT-AGFGECI-----TRRFIQQGHKVIATG 31 (248)
T ss_dssp CEEEETTTT-STTHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-ChHHHHH-----HHHHHHCCCEEEEEe
Confidence 568999984 8999765 456777899988753
No 182
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=44.67 E-value=13 Score=35.14 Aligned_cols=30 Identities=43% Similarity=0.554 Sum_probs=23.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
|-++||||- ||||+. +.+.|.++|++|.+.
T Consensus 7 k~vlVTGas-~gIG~a-----~a~~l~~~G~~V~~~ 36 (247)
T 3rwb_A 7 KTALVTGAA-QGIGKA-----IAARLAADGATVIVS 36 (247)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEE
Confidence 789999985 777764 456777889998874
No 183
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=44.65 E-value=13 Score=35.54 Aligned_cols=32 Identities=38% Similarity=0.446 Sum_probs=24.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
|-++||||- +|||+.+ .+.|-++|++|.+.-.
T Consensus 11 k~~lVTGas-~gIG~ai-----a~~l~~~G~~V~~~~r 42 (267)
T 3t4x_A 11 KTALVTGST-AGIGKAI-----ATSLVAEGANVLINGR 42 (267)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 679999985 7787754 4667778999887543
No 184
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=44.44 E-value=16 Score=34.53 Aligned_cols=32 Identities=31% Similarity=0.528 Sum_probs=24.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
|.++||||- +|||+. +.+.|-++|++|.+.-.
T Consensus 8 k~~lVTGas-~gIG~a-----ia~~l~~~G~~V~~~~r 39 (257)
T 3tpc_A 8 RVFIVTGAS-SGLGAA-----VTRMLAQEGATVLGLDL 39 (257)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-CHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 789999995 777765 45667788999987643
No 185
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=44.40 E-value=13 Score=35.60 Aligned_cols=31 Identities=29% Similarity=0.480 Sum_probs=24.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|.++||||- ||||+. +.+.|-++|++|.+.-
T Consensus 17 k~vlVTGas-~gIG~a-----ia~~l~~~G~~V~~~~ 47 (266)
T 3p19_A 17 KLVVITGAS-SGIGEA-----IARRFSEEGHPLLLLA 47 (266)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHTTCCEEEEE
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEE
Confidence 789999995 778775 4567778899998764
No 186
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=44.29 E-value=16 Score=34.08 Aligned_cols=33 Identities=39% Similarity=0.597 Sum_probs=24.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~d 40 (524)
|-++||||- +|||+. +.+.|.++|++|.+.-.+
T Consensus 3 k~vlVTGas-~giG~~-----~a~~l~~~G~~V~~~~r~ 35 (239)
T 2ekp_A 3 RKALVTGGS-RGIGRA-----IAEALVARGYRVAIASRN 35 (239)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEEeCC
Confidence 789999985 777764 456677889998876444
No 187
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=44.25 E-value=15 Score=35.45 Aligned_cols=31 Identities=35% Similarity=0.530 Sum_probs=24.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|.++||||- +|||+.+ .+.|..+|++|.+.-
T Consensus 30 k~vlVTGas-~gIG~ai-----a~~la~~G~~V~~~~ 60 (277)
T 3gvc_A 30 KVAIVTGAG-AGIGLAV-----ARRLADEGCHVLCAD 60 (277)
T ss_dssp CEEEETTTT-STHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-cHHHHHH-----HHHHHHCCCEEEEEe
Confidence 679999986 8888754 456777899988764
No 188
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=44.04 E-value=14 Score=34.31 Aligned_cols=30 Identities=33% Similarity=0.467 Sum_probs=22.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
|-|+||||- +|||+.+ .+.|.++|++|.+.
T Consensus 6 ~~vlItGas-ggiG~~~-----a~~l~~~G~~V~~~ 35 (247)
T 2hq1_A 6 KTAIVTGSS-RGLGKAI-----AWKLGNMGANIVLN 35 (247)
T ss_dssp CEEEESSCS-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred cEEEEECCC-chHHHHH-----HHHHHHCCCEEEEE
Confidence 679999985 7777654 45677789988765
No 189
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=43.86 E-value=28 Score=31.95 Aligned_cols=47 Identities=21% Similarity=0.234 Sum_probs=32.7
Q ss_pred eEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCcc-ccccCcchHHHHHHHh
Q 009814 111 VQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGT-IGDIESMPFIEALGQF 166 (524)
Q Consensus 111 vqviphit~ei~~~i~~~~~~~~d~~~~~~d~~i~eiggt-vgdies~pf~ea~rq~ 166 (524)
..++|.=-++|++.|++... ..++|++|+ .||| +|+--=.| ||++++
T Consensus 59 ~~iv~Dd~~~I~~al~~a~~------~~~~DlVit-tGG~s~g~~D~t~--eal~~~ 106 (178)
T 2pjk_A 59 YSLVPDDKIKILKAFTDALS------IDEVDVIIS-TGGTGYSPTDITV--ETIRKL 106 (178)
T ss_dssp EEEECSCHHHHHHHHHHHHT------CTTCCEEEE-ESCCSSSTTCCHH--HHHGGG
T ss_pred EEEeCCCHHHHHHHHHHHHh------cCCCCEEEE-CCCCCCCCCcchH--HHHHHH
Confidence 35788888999999999873 335898886 7887 56533333 565554
No 190
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=43.85 E-value=13 Score=35.31 Aligned_cols=32 Identities=31% Similarity=0.434 Sum_probs=23.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
|.++||||- +|||+. +.+.|.++|++|.+.=.
T Consensus 8 k~~lVTGas-~GIG~a-----ia~~l~~~G~~V~~~~r 39 (250)
T 3nyw_A 8 GLAIITGAS-QGIGAV-----IAAGLATDGYRVVLIAR 39 (250)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHHTCEEEEEES
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEEC
Confidence 689999996 777764 45566677998877643
No 191
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=43.84 E-value=13 Score=35.13 Aligned_cols=29 Identities=31% Similarity=0.471 Sum_probs=24.7
Q ss_pred CcchHHHHHHHHHHHHH--CCCeeEEeeecc
Q 009814 13 GLGKGVTASSIGVLLKA--CGLRVTCIKIDP 41 (524)
Q Consensus 13 ~lgkgi~~~s~g~ll~~--~g~~v~~~k~dp 41 (524)
|=|||-|+|++|.-|++ +|++|-++-+++
T Consensus 36 G~GkGKTTaA~GlalRA~g~G~rV~~vQF~K 66 (196)
T 1g5t_A 36 GNGKGKTTAAFGTAARAVGHGKNVGVVQFIK 66 (196)
T ss_dssp SSSSCHHHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCCHHHHHHHHHHHHHHCCCeEEEEEeeC
Confidence 45899999999998886 689999997777
No 192
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=43.63 E-value=16 Score=34.46 Aligned_cols=33 Identities=33% Similarity=0.519 Sum_probs=24.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~d 40 (524)
|-++||||- +|||+.+ .+.|.++|++|.+.-.+
T Consensus 7 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r~ 39 (256)
T 2d1y_A 7 KGVLVTGGA-RGIGRAI-----AQAFAREGALVALCDLR 39 (256)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHCCCEEEEEeCC
Confidence 679999985 7777754 45677789998776433
No 193
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=43.55 E-value=19 Score=41.07 Aligned_cols=36 Identities=17% Similarity=0.228 Sum_probs=32.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHC-----CCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKAC-----GLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~-----g~~v~~~k 38 (524)
|-|||+| .-|+.||=++++.|-++|+.+ |++|...|
T Consensus 35 ~~l~I~g-t~s~vGKT~vt~gL~r~l~~~~~~~~G~~V~~fK 75 (831)
T 4a0g_A 35 PTYLIWS-ANTSLGKTLVSTGIAASFLLQQPSSSATKLLYLK 75 (831)
T ss_dssp CEEEEEE-SSSSSCHHHHHHHHHHHHHSCSSCCTTCEEEEEE
T ss_pred ccEEEEE-CCCCCCHHHHHHHHHHHHHhcccccCCceEEEEc
Confidence 5567764 679999999999999999999 99999999
No 194
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=43.54 E-value=16 Score=35.34 Aligned_cols=33 Identities=39% Similarity=0.678 Sum_probs=26.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~d 40 (524)
|-++||||- ||||+. +.+.|-+.|.+|.+.-.|
T Consensus 12 K~alVTGas-~GIG~a-----ia~~la~~Ga~Vv~~~~~ 44 (242)
T 4b79_A 12 QQVLVTGGS-SGIGAA-----IAMQFAELGAEVVALGLD 44 (242)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCC-CHHHHH-----HHHHHHHCCCEEEEEeCC
Confidence 779999995 788875 467888999999886543
No 195
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=43.42 E-value=17 Score=34.77 Aligned_cols=34 Identities=29% Similarity=0.472 Sum_probs=25.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dp 41 (524)
|.|+||||- +|||+.+ .+.|.++|++|.+.-.++
T Consensus 9 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r~~ 42 (264)
T 2dtx_A 9 KVVIVTGAS-MGIGRAI-----AERFVDEGSKVIDLSIHD 42 (264)
T ss_dssp CEEEEESCS-SHHHHHH-----HHHHHHTTCEEEEEESSC
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHCCCEEEEEecCc
Confidence 789999985 7777754 466778899998875443
No 196
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=43.40 E-value=15 Score=35.43 Aligned_cols=31 Identities=29% Similarity=0.416 Sum_probs=23.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|.++||||- ||||+.+ .+.|-.+|++|.+.-
T Consensus 34 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~~ 64 (275)
T 4imr_A 34 RTALVTGSS-RGIGAAI-----AEGLAGAGAHVILHG 64 (275)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEEc
Confidence 789999986 7887754 456777899988753
No 197
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=43.30 E-value=14 Score=34.37 Aligned_cols=31 Identities=32% Similarity=0.408 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|.++||||- +|||+. +.+.|-++|++|.+.-
T Consensus 6 k~vlITGas-~gIG~~-----~a~~l~~~G~~v~~~~ 36 (247)
T 3lyl_A 6 KVALVTGAS-RGIGFE-----VAHALASKGATVVGTA 36 (247)
T ss_dssp CEEEESSCS-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-ChHHHH-----HHHHHHHCCCEEEEEe
Confidence 789999985 777764 5566778899887654
No 198
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=43.15 E-value=15 Score=35.08 Aligned_cols=33 Identities=39% Similarity=0.524 Sum_probs=25.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~d 40 (524)
|.++||||- +|||+. +.+.|-++|++|.++-.+
T Consensus 11 k~vlVTGas-~gIG~~-----ia~~l~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 11 KVVLVTGGA-RGQGRS-----HAVKLAEEGADIILFDIC 43 (287)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEECC
T ss_pred CEEEEeCCC-ChHHHH-----HHHHHHHCCCeEEEEccc
Confidence 789999996 677764 556777889999886443
No 199
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=43.13 E-value=31 Score=31.32 Aligned_cols=61 Identities=11% Similarity=0.117 Sum_probs=32.9
Q ss_pred hHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccCc-------chHHHHHHHhhhhcCCCCEEEEEeeeeeee
Q 009814 118 TDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIES-------MPFIEALGQFSYRVGPGNFCLIHVSLVPVL 186 (524)
Q Consensus 118 t~ei~~~i~~~~~~~~d~~~~~~d~~i~eiggtvgdies-------~pf~ea~rq~~~~~~~~n~~~ih~~~vp~~ 186 (524)
|..+..|+.+... ..+||+|+|.+|. .|+-. .-+.+-+++|.......++-.+-+|..|.-
T Consensus 63 t~~~l~r~~~~v~------~~~Pd~vvi~~G~--ND~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~iil~~~~P~~ 130 (209)
T 4hf7_A 63 SYQFLLRFREDVI------NLSPALVVINAGT--NDVAENTGAYNEDYTFGNIASMAELAKANKIKVILTSVLPAA 130 (209)
T ss_dssp HHHHHHHHHHHTG------GGCCSEEEECCCH--HHHTTSSSSCCHHHHHHHHHHHHHHHHHTTCEEEEECCCCCS
T ss_pred HHHHHHHHHHHHH------hcCCCEEEEEeCC--CcCccccccccHHHHHHHHHHhhHHHhccCceEEEEeeeccC
Confidence 4556667766321 3579999999985 45421 113334454433322234545555666644
No 200
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=42.99 E-value=17 Score=34.18 Aligned_cols=33 Identities=30% Similarity=0.424 Sum_probs=25.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~d 40 (524)
|-++||||- +|||+.+ .+.|.++|++|.+.-.+
T Consensus 8 k~vlVTGas-~giG~~i-----a~~l~~~G~~V~~~~r~ 40 (250)
T 2fwm_X 8 KNVWVTGAG-KGIGYAT-----ALAFVEAGAKVTGFDQA 40 (250)
T ss_dssp CEEEEESTT-SHHHHHH-----HHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEEeCc
Confidence 679999985 7777754 46677889999887544
No 201
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=42.94 E-value=11 Score=34.80 Aligned_cols=33 Identities=24% Similarity=0.307 Sum_probs=25.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~d 40 (524)
|-++||||- +|||+.++ +.|.++|++|.+.-.+
T Consensus 7 k~vlVTGas-~gIG~~~a-----~~l~~~G~~V~~~~r~ 39 (223)
T 3uce_A 7 TVYVVLGGT-SGIGAELA-----KQLESEHTIVHVASRQ 39 (223)
T ss_dssp EEEEEETTT-SHHHHHHH-----HHHCSTTEEEEEESGG
T ss_pred CEEEEECCC-CHHHHHHH-----HHHHHCCCEEEEecCC
Confidence 789999986 78887655 5677889998876444
No 202
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=42.78 E-value=14 Score=34.61 Aligned_cols=29 Identities=34% Similarity=0.636 Sum_probs=22.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~ 36 (524)
|.|+||||- +|||+.+ .+.|-++|++|.+
T Consensus 14 k~vlITGas-~giG~~i-----a~~l~~~G~~v~~ 42 (256)
T 3ezl_A 14 RIAYVTGGM-GGIGTSI-----CQRLHKDGFRVVA 42 (256)
T ss_dssp EEEEETTTT-SHHHHHH-----HHHHHHTTEEEEE
T ss_pred CEEEEECCC-ChHHHHH-----HHHHHHCCCEEEE
Confidence 889999995 7777654 4567778988754
No 203
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=42.67 E-value=14 Score=35.48 Aligned_cols=30 Identities=37% Similarity=0.627 Sum_probs=22.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
|.++||||- ||||+. +.+.|-++|++|.+.
T Consensus 29 k~vlVTGas-~gIG~a-----ia~~la~~G~~V~~~ 58 (269)
T 4dmm_A 29 RIALVTGAS-RGIGRA-----IALELAAAGAKVAVN 58 (269)
T ss_dssp CEEEETTCS-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEE
Confidence 789999986 778775 455677789988653
No 204
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=42.26 E-value=17 Score=33.74 Aligned_cols=31 Identities=32% Similarity=0.473 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|-++||||- +|||+.+ .+.|.++|++|.+.-
T Consensus 3 k~vlItGas-ggiG~~~-----a~~l~~~G~~V~~~~ 33 (250)
T 2cfc_A 3 RVAIVTGAS-SGNGLAI-----ATRFLARGDRVAALD 33 (250)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-chHHHHH-----HHHHHHCCCEEEEEe
Confidence 789999985 7777754 456677899887764
No 205
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=42.03 E-value=16 Score=34.67 Aligned_cols=32 Identities=28% Similarity=0.301 Sum_probs=24.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
|-++||||- ||||+. +.+.|-++|++|.+.-.
T Consensus 9 k~~lVTGas-~gIG~a-----~a~~l~~~G~~V~~~~r 40 (255)
T 4eso_A 9 KKAIVIGGT-HGMGLA-----TVRRLVEGGAEVLLTGR 40 (255)
T ss_dssp CEEEEETCS-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 789999985 777764 55677788999887543
No 206
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=41.94 E-value=16 Score=34.93 Aligned_cols=32 Identities=38% Similarity=0.534 Sum_probs=23.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
|-++||||- +|||+.++ +.|.++|++|.+.-.
T Consensus 22 k~~lVTGas-~gIG~~ia-----~~l~~~G~~V~~~~r 53 (267)
T 1vl8_A 22 RVALVTGGS-RGLGFGIA-----QGLAEAGCSVVVASR 53 (267)
T ss_dssp CEEEEETTT-SHHHHHHH-----HHHHHTTCEEEEEES
T ss_pred CEEEEECCC-CHHHHHHH-----HHHHHCCCEEEEEeC
Confidence 789999985 77877554 566778998877533
No 207
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=41.88 E-value=19 Score=33.45 Aligned_cols=34 Identities=32% Similarity=0.448 Sum_probs=25.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dp 41 (524)
|-++||||- +|||+. +.+.|.++|++|.+.-.++
T Consensus 4 k~vlITGas-~gIG~~-----~a~~l~~~G~~V~~~~r~~ 37 (236)
T 1ooe_A 4 GKVIVYGGK-GALGSA-----ILEFFKKNGYTVLNIDLSA 37 (236)
T ss_dssp EEEEEETTT-SHHHHH-----HHHHHHHTTEEEEEEESSC
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEecCc
Confidence 789999984 667764 5567778899998875443
No 208
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=41.86 E-value=18 Score=33.78 Aligned_cols=34 Identities=29% Similarity=0.328 Sum_probs=23.5
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHH-CCCeeEEeeec
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKA-CGLRVTCIKID 40 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~-~g~~v~~~k~d 40 (524)
+|-|+||||- +|||+.++ +.|-. +|++|.+.=.+
T Consensus 4 ~k~vlITGas-ggIG~~~a-----~~L~~~~g~~V~~~~r~ 38 (276)
T 1wma_A 4 IHVALVTGGN-KGIGLAIV-----RDLCRLFSGDVVLTARD 38 (276)
T ss_dssp CCEEEESSCS-SHHHHHHH-----HHHHHHSSSEEEEEESS
T ss_pred CCEEEEeCCC-cHHHHHHH-----HHHHHhcCCeEEEEeCC
Confidence 3789999985 77776543 44555 89988776444
No 209
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=41.73 E-value=26 Score=32.23 Aligned_cols=34 Identities=32% Similarity=0.491 Sum_probs=24.5
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~d 40 (524)
||-|+||||- ++||+-+ .+.|.++|++|.++-.+
T Consensus 1 Mk~vlVtGas-g~iG~~l-----~~~L~~~g~~V~~~~r~ 34 (255)
T 2dkn_A 1 MSVIAITGSA-SGIGAAL-----KELLARAGHTVIGIDRG 34 (255)
T ss_dssp -CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEESS
T ss_pred CcEEEEeCCC-cHHHHHH-----HHHHHhCCCEEEEEeCC
Confidence 6889999985 6666654 45566789999887543
No 210
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=41.67 E-value=1.1e+02 Score=28.96 Aligned_cols=77 Identities=18% Similarity=0.164 Sum_probs=49.0
Q ss_pred eEEEEEeccCCCcchHHHHHHHHHHcCCceeEEeeeEEeeCCCccccccCCChhhhhHHHHhccCCCEEEECCCCCCCch
Q 009814 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGV 377 (524)
Q Consensus 298 v~IaiVGkY~~~~day~SI~~aL~~ag~~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~l~~~DGIllpGGfG~rg~ 377 (524)
-+|.+||-- ..+...|.++-+.+|+... +-.|++- .++.... +....||.+||.. | .
T Consensus 69 ~~iLfVgTk---~~~~~~V~~~A~~~g~~~v---~~rwlgG-~LTN~~~-----------~~f~~PdlliV~D-p---~- 125 (208)
T 1vi6_A 69 SKILLVAAR---QYAHKPVQMFSKVVGSDYI---VGRFIPG-TLTNPML-----------SEYREPEVVFVND-P---A- 125 (208)
T ss_dssp GGEEEEECS---GGGHHHHHHHHHHHCCEEE---ESSCCTT-TTTCTTS-----------TTCCCCSEEEESC-T---T-
T ss_pred CEEEEEeCC---HHHHHHHHHHHHHhCCeee---cCEECCC-cccChhh-----------HhhCCCCEEEEEC-C---C-
Confidence 468888732 1245566676667776543 3367654 3332111 2346799999886 2 1
Q ss_pred hHHHHHHHHHHHcCCCEEEEh
Q 009814 378 QGKILAAKYAREHRIPYLGIC 398 (524)
Q Consensus 378 eg~i~air~are~~iP~LGIC 398 (524)
....|+++|..-+||+.|||
T Consensus 126 -~e~~ai~EA~~l~IPvIalv 145 (208)
T 1vi6_A 126 -IDKQAVSEATAVGIPVVALC 145 (208)
T ss_dssp -TTHHHHHHHHHTTCCEEEEE
T ss_pred -cchhHHHHHHHhCCCEEEEe
Confidence 23568999999999999998
No 211
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=41.49 E-value=16 Score=35.25 Aligned_cols=33 Identities=27% Similarity=0.488 Sum_probs=24.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~d 40 (524)
|.++||||- ||||+.+ .+.|-.+|++|.+.-.+
T Consensus 5 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~~r~ 37 (264)
T 3tfo_A 5 KVILITGAS-GGIGEGI-----ARELGVAGAKILLGARR 37 (264)
T ss_dssp CEEEESSTT-SHHHHHH-----HHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCc-cHHHHHH-----HHHHHHCCCEEEEEECC
Confidence 789999996 7888755 45677789988776443
No 212
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=41.44 E-value=15 Score=34.91 Aligned_cols=29 Identities=41% Similarity=0.595 Sum_probs=21.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~ 36 (524)
|.++||||- ||||+ ++.+.|-.+|++|.+
T Consensus 27 k~vlITGas-~gIG~-----a~a~~l~~~G~~V~~ 55 (272)
T 4e3z_A 27 PVVLVTGGS-RGIGA-----AVCRLAARQGWRVGV 55 (272)
T ss_dssp CEEEETTTT-SHHHH-----HHHHHHHHTTCEEEE
T ss_pred CEEEEECCC-chHHH-----HHHHHHHHCCCEEEE
Confidence 789999984 77776 455667778988754
No 213
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=41.44 E-value=19 Score=33.90 Aligned_cols=32 Identities=22% Similarity=0.548 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
|.++||||- +|||+.+ .+.|.++|++|.+.-.
T Consensus 8 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r 39 (249)
T 2ew8_A 8 KLAVITGGA-NGIGRAI-----AERFAVEGADIAIADL 39 (249)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEEcC
Confidence 789999984 7777654 4566778998877543
No 214
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=41.44 E-value=17 Score=34.39 Aligned_cols=31 Identities=23% Similarity=0.410 Sum_probs=23.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|-++||||- +|||+.+ .+.|.++|++|.+.-
T Consensus 8 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~ 38 (263)
T 3ai3_A 8 KVAVITGSS-SGIGLAI-----AEGFAKEGAHIVLVA 38 (263)
T ss_dssp CEEEEESCS-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-chHHHHH-----HHHHHHCCCEEEEEc
Confidence 779999985 7777654 456777899887753
No 215
>3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A
Probab=41.41 E-value=43 Score=30.21 Aligned_cols=59 Identities=12% Similarity=0.103 Sum_probs=46.2
Q ss_pred EEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccC
Q 009814 3 YVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDD 63 (524)
Q Consensus 3 ~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtmsp~~hgevfv~~d 63 (524)
-++++|- +|.||=..+..++..+...|++|..+..+.+.+.-...+.-+....|.+.||
T Consensus 54 ~~ll~G~--~G~GKT~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vliiDe 112 (242)
T 3bos_A 54 AIYLWGP--VKSGRTHLIHAACARANELERRSFYIPLGIHASISTALLEGLEQFDLICIDD 112 (242)
T ss_dssp EEEEECS--TTSSHHHHHHHHHHHHHHTTCCEEEEEGGGGGGSCGGGGTTGGGSSEEEEET
T ss_pred eEEEECC--CCCCHHHHHHHHHHHHHHcCCeEEEEEHHHHHHHHHHHHHhccCCCEEEEec
Confidence 4778886 6999999999999999999999999888776654444445555566777776
No 216
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=41.38 E-value=17 Score=34.58 Aligned_cols=32 Identities=34% Similarity=0.398 Sum_probs=23.8
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
+|-++||||- +|||+.+ .+.|.++|++|...-
T Consensus 5 ~k~vlVTGas-~gIG~~~-----a~~l~~~G~~V~~~~ 36 (281)
T 3m1a_A 5 AKVWLVTGAS-SGFGRAI-----AEAAVAAGDTVIGTA 36 (281)
T ss_dssp CCEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CcEEEEECCC-ChHHHHH-----HHHHHHCCCEEEEEe
Confidence 3789999985 7777654 456777899987653
No 217
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=41.31 E-value=16 Score=34.54 Aligned_cols=32 Identities=34% Similarity=0.693 Sum_probs=23.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
|.++||||- +|||+.+ .+.|.++|++|.+.-.
T Consensus 3 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r 34 (258)
T 3a28_C 3 KVAMVTGGA-QGIGRGI-----SEKLAADGFDIAVADL 34 (258)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHHTCEEEEEEC
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 789999985 7777754 4556667998877533
No 218
>3lv8_A DTMP kinase, thymidylate kinase; structural genomics, in diseases, center for structural genomics of infectious DISE ATP-binding; HET: ADP TMP TYD; 1.80A {Vibrio cholerae o1 biovar eltor} PDB: 3n2i_A*
Probab=41.29 E-value=27 Score=33.55 Aligned_cols=35 Identities=23% Similarity=0.457 Sum_probs=30.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCe-eEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLR-VTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~-v~~~k 38 (524)
++|.+.|. +|-||+..+.-|...|+.+|++ |...+
T Consensus 28 ~~i~~eG~--~GsGKsT~~~~l~~~l~~~~~~~~~~~r 63 (236)
T 3lv8_A 28 KFIVIEGL--EGAGKSTAIQVVVETLQQNGIDHITRTR 63 (236)
T ss_dssp CEEEEEES--TTSCHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHHhcCCCeeeeec
Confidence 68999985 7999999999999999999999 55444
No 219
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=41.09 E-value=16 Score=34.62 Aligned_cols=31 Identities=29% Similarity=0.467 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|.++||||- +|||+.++ +.|-.+|++|.+.=
T Consensus 30 k~vlITGas-~gIG~~la-----~~l~~~G~~V~~~~ 60 (262)
T 3rkr_A 30 QVAVVTGAS-RGIGAAIA-----RKLGSLGARVVLTA 60 (262)
T ss_dssp CEEEESSTT-SHHHHHHH-----HHHHHTTCEEEEEE
T ss_pred CEEEEECCC-ChHHHHHH-----HHHHHCCCEEEEEE
Confidence 789999985 78887654 56667899887653
No 220
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=41.00 E-value=16 Score=34.40 Aligned_cols=31 Identities=39% Similarity=0.567 Sum_probs=23.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|.++||||- ||||+.+ .+.|-++|++|.+.-
T Consensus 10 k~~lVTGas-~gIG~a~-----a~~l~~~G~~V~~~~ 40 (248)
T 3op4_A 10 KVALVTGAS-RGIGKAI-----AELLAERGAKVIGTA 40 (248)
T ss_dssp CEEEESSCS-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHCCCEEEEEe
Confidence 789999985 7777654 456778899987653
No 221
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=40.99 E-value=16 Score=34.74 Aligned_cols=29 Identities=34% Similarity=0.568 Sum_probs=22.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~ 36 (524)
|-++||||- ||||+.+ .+.|-++|++|.+
T Consensus 5 k~vlVTGas-~gIG~ai-----a~~l~~~G~~vv~ 33 (258)
T 3oid_A 5 KCALVTGSS-RGVGKAA-----AIRLAENGYNIVI 33 (258)
T ss_dssp CEEEESSCS-SHHHHHH-----HHHHHHTTCEEEE
T ss_pred CEEEEecCC-chHHHHH-----HHHHHHCCCEEEE
Confidence 789999985 7787754 5667788998865
No 222
>2p67_A LAO/AO transport system kinase; ARGK, structural GEN PSI-2, protein structure initiative, NEW YORK SGX research for structural genomics; 1.80A {Escherichia coli} SCOP: c.37.1.10
Probab=40.99 E-value=1.1e+02 Score=30.26 Aligned_cols=40 Identities=38% Similarity=0.532 Sum_probs=34.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccc
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYL 43 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpyl 43 (524)
+.|.++| -.|-||=.+...|..+++..|.+|.++-.||.-
T Consensus 57 ~~i~i~G--~~g~GKSTl~~~l~~~~~~~~~~v~v~~~d~~~ 96 (341)
T 2p67_A 57 LRLGVTG--TPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSS 96 (341)
T ss_dssp EEEEEEE--CTTSCHHHHHHHHHHHHHHTTCCEEEEEECCC-
T ss_pred EEEEEEc--CCCCCHHHHHHHHHHHHHhcCCeEEEEeecCCc
Confidence 4567777 899999999999999999999999999888864
No 223
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=40.98 E-value=16 Score=34.67 Aligned_cols=29 Identities=38% Similarity=0.622 Sum_probs=22.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~ 36 (524)
|.++||||- +|||+. +.+.|-++|++|.+
T Consensus 27 k~vlVTGas-~gIG~~-----la~~l~~~G~~v~i 55 (267)
T 4iiu_A 27 RSVLVTGAS-KGIGRA-----IARQLAADGFNIGV 55 (267)
T ss_dssp CEEEETTTT-SHHHHH-----HHHHHHHTTCEEEE
T ss_pred CEEEEECCC-ChHHHH-----HHHHHHHCCCEEEE
Confidence 779999985 788774 45667778988754
No 224
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=40.89 E-value=19 Score=34.38 Aligned_cols=32 Identities=34% Similarity=0.503 Sum_probs=24.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
|-++||||- ||||+. +.+.|-++|++|.+.-.
T Consensus 31 k~vlVTGas-~GIG~a-----ia~~l~~~G~~Vi~~~r 62 (281)
T 3ppi_A 31 ASAIVSGGA-GGLGEA-----TVRRLHADGLGVVIADL 62 (281)
T ss_dssp EEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-ChHHHH-----HHHHHHHCCCEEEEEeC
Confidence 789999985 777765 44666778999887643
No 225
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=40.75 E-value=17 Score=34.76 Aligned_cols=32 Identities=25% Similarity=0.504 Sum_probs=24.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
|.++||||- ||||+.+ .+.|-.+|++|.+.-.
T Consensus 12 k~~lVTGas-~GIG~a~-----a~~la~~G~~V~~~~r 43 (277)
T 3tsc_A 12 RVAFITGAA-RGQGRAH-----AVRMAAEGADIIAVDI 43 (277)
T ss_dssp CEEEEESTT-SHHHHHH-----HHHHHHTTCEEEEEEC
T ss_pred CEEEEECCc-cHHHHHH-----HHHHHHcCCEEEEEec
Confidence 789999985 7777654 4567788999987643
No 226
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=40.74 E-value=15 Score=34.72 Aligned_cols=30 Identities=37% Similarity=0.523 Sum_probs=23.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
|.++||||- ||||+. +.+.|-++|++|.+.
T Consensus 10 k~vlVTGas-~gIG~a-----ia~~l~~~G~~V~~~ 39 (257)
T 3tl3_A 10 AVAVVTGGA-SGLGLA-----TTKRLLDAGAQVVVL 39 (257)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHHTCEEEEE
T ss_pred CEEEEeCCC-CHHHHH-----HHHHHHHCCCEEEEE
Confidence 679999986 778775 445677789988774
No 227
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=40.69 E-value=16 Score=34.24 Aligned_cols=30 Identities=33% Similarity=0.524 Sum_probs=22.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
|.++||||- +|||+.++ +.|.++|++|.+.
T Consensus 5 k~vlVTGas-~giG~~ia-----~~l~~~G~~V~~~ 34 (246)
T 2uvd_A 5 KVALVTGAS-RGIGRAIA-----IDLAKQGANVVVN 34 (246)
T ss_dssp CEEEETTCS-SHHHHHHH-----HHHHHTTCEEEEE
T ss_pred CEEEEECCC-cHHHHHHH-----HHHHHCCCEEEEE
Confidence 789999986 78887654 5666789888664
No 228
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=40.63 E-value=20 Score=35.36 Aligned_cols=32 Identities=34% Similarity=0.532 Sum_probs=24.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
|-++||||- ||||+.+ .+.|-++|++|.+.=.
T Consensus 9 k~vlVTGas-~gIG~~l-----a~~l~~~G~~Vv~~~r 40 (319)
T 3ioy_A 9 RTAFVTGGA-NGVGIGL-----VRQLLNQGCKVAIADI 40 (319)
T ss_dssp CEEEEETTT-STHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEcCCc-hHHHHHH-----HHHHHHCCCEEEEEEC
Confidence 689999997 8888754 4566678999877544
No 229
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=40.62 E-value=18 Score=34.21 Aligned_cols=31 Identities=26% Similarity=0.507 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|-++||||- +|||+.+ .+.|-++|++|.+.=
T Consensus 13 k~vlVTGas-~gIG~ai-----a~~l~~~G~~V~~~~ 43 (252)
T 3f1l_A 13 RIILVTGAS-DGIGREA-----AMTYARYGATVILLG 43 (252)
T ss_dssp CEEEEESTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-ChHHHHH-----HHHHHHCCCEEEEEe
Confidence 789999985 7777654 456777899987753
No 230
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=40.59 E-value=17 Score=34.85 Aligned_cols=32 Identities=38% Similarity=0.459 Sum_probs=24.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
|.++||||- +|||+.+ .+.|..+|++|.+.-.
T Consensus 23 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r 54 (277)
T 2rhc_B 23 EVALVTGAT-SGIGLEI-----ARRLGKEGLRVFVCAR 54 (277)
T ss_dssp CEEEEETCS-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 789999984 7788754 4567778998877643
No 231
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=40.40 E-value=19 Score=34.34 Aligned_cols=32 Identities=28% Similarity=0.509 Sum_probs=24.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
|.++||||- +|||+. +.+.|-++|++|.+.-.
T Consensus 12 k~vlVTGas-~gIG~a-----ia~~l~~~G~~V~~~~r 43 (271)
T 3tzq_B 12 KVAIITGAC-GGIGLE-----TSRVLARAGARVVLADL 43 (271)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEcC
Confidence 789999995 777765 45667788999887643
No 232
>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9
Probab=40.34 E-value=21 Score=34.10 Aligned_cols=44 Identities=20% Similarity=0.180 Sum_probs=30.9
Q ss_pred cCCCEEEECCCCCCC-chhHHHHHHH-HHHHcCCCEEEEhHhHHHHH
Q 009814 361 KGADGILVPGGFGNR-GVQGKILAAK-YAREHRIPYLGICLGMQVAV 405 (524)
Q Consensus 361 ~~~DGIllpGGfG~r-g~eg~i~air-~are~~iP~LGICLGmQll~ 405 (524)
.+.|+|.++-|||.- |+.=-+.++| .|...++|++||+- ++.++
T Consensus 65 ~dld~Iav~~GPGsfTGlRiG~~~Ak~La~~~~iPl~gVs~-l~a~a 110 (218)
T 2a6a_A 65 KDLDVVGVGIGPGGLTGLRVGIATVVGLVSPYDIPVAPLNS-FEMTA 110 (218)
T ss_dssp GGCSEEEEECCSSCHHHHHHHHHHHHHHHGGGTCCEEEECH-HHHHH
T ss_pred HHCCEEEEEcCCCchHhHHHHHHHHHHHHHHcCCCEEEeCc-HHHHH
Confidence 467999999999985 5542233333 35667999999996 55444
No 233
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=40.29 E-value=18 Score=33.84 Aligned_cols=31 Identities=29% Similarity=0.369 Sum_probs=23.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|.++||||- +|||+. +.+.|-++|++|.+.-
T Consensus 10 k~vlITGas-~giG~~-----~a~~l~~~G~~V~~~~ 40 (253)
T 3qiv_A 10 KVGIVTGSG-GGIGQA-----YAEALAREGAAVVVAD 40 (253)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-ChHHHH-----HHHHHHHCCCEEEEEc
Confidence 789999984 777764 5567778899988753
No 234
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=40.28 E-value=16 Score=35.34 Aligned_cols=31 Identities=39% Similarity=0.636 Sum_probs=23.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|-++||||- ||||+.+ .+.|-++|++|.+.-
T Consensus 34 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~~ 64 (281)
T 4dry_A 34 RIALVTGGG-TGVGRGI-----AQALSAEGYSVVITG 64 (281)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHCCCEEEEEE
Confidence 679999985 7788755 455667899887753
No 235
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=40.15 E-value=1.9e+02 Score=25.37 Aligned_cols=96 Identities=10% Similarity=0.041 Sum_probs=51.4
Q ss_pred HHHHHHHHhhcCCCCCeEEEEEeccCCCcchHHHHHHHHHHcCCceeEEeeeEEeeCCCccccccCCChhhhhHHHHhcc
Q 009814 282 KEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLK 361 (524)
Q Consensus 282 ~~W~~lv~~~~~~~~~v~IaiVGkY~~~~day~SI~~aL~~ag~~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~l~ 361 (524)
..+.++++.+.+. -+|.++| .+...-.-......|.+.|..+... +.+. ..+......+.
T Consensus 27 ~~l~~~~~~i~~a---~~I~i~G-~G~S~~~a~~~~~~l~~~g~~~~~~------~~~~----------~~~~~~~~~~~ 86 (187)
T 3sho_A 27 EAIEAAVEAICRA---DHVIVVG-MGFSAAVAVFLGHGLNSLGIRTTVL------TEGG----------STLTITLANLR 86 (187)
T ss_dssp HHHHHHHHHHHHC---SEEEEEC-CGGGHHHHHHHHHHHHHTTCCEEEE------CCCT----------HHHHHHHHTCC
T ss_pred HHHHHHHHHHHhC---CEEEEEe-cCchHHHHHHHHHHHHhcCCCEEEe------cCCc----------hhHHHHHhcCC
Confidence 4566677777653 2788888 4421111122345566666665543 2110 01111112233
Q ss_pred CCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEEhH
Q 009814 362 GADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICL 399 (524)
Q Consensus 362 ~~DGIllpGGfG~rg~eg~i~air~are~~iP~LGICL 399 (524)
.=|-+|+-.-.|. ....+++++.|++++.|+.+|+-
T Consensus 87 ~~d~~i~iS~sG~--t~~~~~~~~~ak~~g~~vi~IT~ 122 (187)
T 3sho_A 87 PTDLMIGVSVWRY--LRDTVAALAGAAERGVPTMALTD 122 (187)
T ss_dssp TTEEEEEECCSSC--CHHHHHHHHHHHHTTCCEEEEES
T ss_pred CCCEEEEEeCCCC--CHHHHHHHHHHHHCCCCEEEEeC
Confidence 3454443332333 34578899999999999999974
No 236
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=40.13 E-value=16 Score=34.71 Aligned_cols=32 Identities=31% Similarity=0.654 Sum_probs=24.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
|-++||||- +|||+.+ .+.|-++|++|.+.-.
T Consensus 11 k~vlVTGas-~gIG~ai-----a~~l~~~G~~V~~~~r 42 (262)
T 3pk0_A 11 RSVVVTGGT-KGIGRGI-----ATVFARAGANVAVAGR 42 (262)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-cHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 789999985 7777754 4567788998877643
No 237
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=40.11 E-value=18 Score=34.14 Aligned_cols=32 Identities=34% Similarity=0.406 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
|-++|||| -+|||+.+ .+.|.++|++|.+.-.
T Consensus 10 k~vlVTGa-s~giG~~i-----a~~l~~~G~~V~~~~r 41 (260)
T 2ae2_A 10 CTALVTGG-SRGIGYGI-----VEELASLGASVYTCSR 41 (260)
T ss_dssp CEEEEESC-SSHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEECC-CcHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 77999998 47777754 4556678998877643
No 238
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=40.10 E-value=18 Score=34.35 Aligned_cols=31 Identities=42% Similarity=0.703 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|.++||||- +|||+.++ +.|.++|++|.+.-
T Consensus 14 k~vlVTGas-~gIG~~ia-----~~l~~~G~~V~~~~ 44 (267)
T 1iy8_A 14 RVVLITGGG-SGLGRATA-----VRLAAEGAKLSLVD 44 (267)
T ss_dssp CEEEEETTT-SHHHHHHH-----HHHHHTTCEEEEEE
T ss_pred CEEEEECCC-CHHHHHHH-----HHHHHCCCEEEEEe
Confidence 789999984 88887654 55667899887753
No 239
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=40.03 E-value=16 Score=34.70 Aligned_cols=30 Identities=30% Similarity=0.541 Sum_probs=22.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
|-++||||- +|||+.++ +.|.++|++|.+.
T Consensus 12 k~~lVTGas-~gIG~~ia-----~~l~~~G~~V~~~ 41 (276)
T 1mxh_A 12 PAAVITGGA-RRIGHSIA-----VRLHQQGFRVVVH 41 (276)
T ss_dssp CEEEETTCS-SHHHHHHH-----HHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHHHH-----HHHHHCCCEEEEE
Confidence 679999986 77877554 5566789988764
No 240
>2vos_A Folylpolyglutamate synthase protein FOLC; ligase, peptidoglycan synthesis, cell division; HET: ADP; 2.0A {Mycobacterium tuberculosis} PDB: 2vor_A*
Probab=39.97 E-value=26 Score=37.18 Aligned_cols=31 Identities=23% Similarity=0.231 Sum_probs=27.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~ 36 (524)
|.|-|||- =|||-|++=|..+|++.|++|-.
T Consensus 65 ~vI~VtGT----NGKtST~~~l~~iL~~~G~~vG~ 95 (487)
T 2vos_A 65 PSIHIAGT----NGKTSVARMVDALVTALHRRTGR 95 (487)
T ss_dssp CEEEEECS----SSHHHHHHHHHHHHHHTTCCEEE
T ss_pred eEEEEeCC----CCcHHHHHHHHHHHHHcCCCeEE
Confidence 57888884 59999999999999999999854
No 241
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=39.96 E-value=44 Score=29.00 Aligned_cols=74 Identities=9% Similarity=0.131 Sum_probs=39.9
Q ss_pred hHhhHHHHhhhhcCCCCCCeeEEc-----ccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCcccccc----CcchHHH
Q 009814 91 GKIYQSVIDKERKGDYLGKTVQVV-----PHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDI----ESMPFIE 161 (524)
Q Consensus 91 g~iy~~vi~ker~g~ylg~tvqvi-----phit~ei~~~i~~~~~~~~d~~~~~~d~~i~eiggtvgdi----es~pf~e 161 (524)
++-|...+.+.=... |..++|+ =.-|....+++..... ..+||+|+|++|+ .|+ ...-|.+
T Consensus 21 ~~~~~~~l~~~l~~~--~~~~~v~n~g~~G~~~~~~~~~~~~~~~------~~~pd~vvi~~G~--ND~~~~~~~~~~~~ 90 (185)
T 3hp4_A 21 EEGWVKLLQDKYDAE--QSDIVLINASISGETSGGALRRLDALLE------QYEPTHVLIELGA--NDGLRGFPVKKMQT 90 (185)
T ss_dssp GGSHHHHHHHHHHHT--TCCEEEEECCCTTCCHHHHHHHHHHHHH------HHCCSEEEEECCH--HHHHTTCCHHHHHH
T ss_pred cccHHHHHHHHHHhc--CCcEEEEECCcCCccHHHHHHHHHHHHh------hcCCCEEEEEeec--ccCCCCcCHHHHHH
Confidence 356666666543222 4556664 1234455555655431 2379999999995 453 2233555
Q ss_pred HHHHhhhhcCCCC
Q 009814 162 ALGQFSYRVGPGN 174 (524)
Q Consensus 162 a~rq~~~~~~~~n 174 (524)
.+++|-..+...+
T Consensus 91 ~~~~~i~~~~~~~ 103 (185)
T 3hp4_A 91 NLTALVKKSQAAN 103 (185)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcC
Confidence 5555554444333
No 242
>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}
Probab=39.83 E-value=18 Score=35.62 Aligned_cols=62 Identities=27% Similarity=0.436 Sum_probs=43.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCC-eeEEee--ecccccCCCCCCCccccceEEEccCCccccCCC
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGL-RVTCIK--IDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDL 71 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~-~v~~~k--~dpyln~d~gtmsp~~hgevfv~~dg~e~dldl 71 (524)
+.|+.+.| |+.|+....+|+..|| +|..++ +.-|..-=+.. .+.-.|++||-|+=--++-+|
T Consensus 183 ~IVvyC~~-------G~RS~~Aa~~L~~~Gf~nV~~L~GGi~aW~~~~~~~-~~~w~G~~fVFD~R~~~~~~l 247 (265)
T 4f67_A 183 KIAMFCTG-------GIRCEKTTAYMKELGFEHVYQLHDGILNYLESIPES-ESLWEGKCFVFDDRVAVDQKL 247 (265)
T ss_dssp CEEEECSS-------SHHHHHHHHHHHHHTCSSEEEETTHHHHHHHHSCTT-TCCEEECEECSSTTCEECTTS
T ss_pred eEEEEeCC-------ChHHHHHHHHHHHcCCCCEEEecCHHHHHHHhcCcc-cccccCcceeEcCccccccCH
Confidence 45666653 6778888999999999 588765 44454322222 345579999999987777766
No 243
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=39.83 E-value=18 Score=34.64 Aligned_cols=33 Identities=30% Similarity=0.501 Sum_probs=25.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~d 40 (524)
|.++||||- +|||+.+ .+.|-++|++|.+.-.+
T Consensus 11 k~~lVTGas-~gIG~a~-----a~~l~~~G~~V~~~~r~ 43 (281)
T 3s55_A 11 KTALITGGA-RGMGRSH-----AVALAEAGADIAICDRC 43 (281)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEECC
T ss_pred CEEEEeCCC-chHHHHH-----HHHHHHCCCeEEEEeCC
Confidence 789999986 7777654 56677889998876544
No 244
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=39.83 E-value=20 Score=33.47 Aligned_cols=32 Identities=28% Similarity=0.440 Sum_probs=23.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
|.|+||||- +|||+.+ .+.|.++|++|.++-.
T Consensus 13 k~vlVTGas-ggiG~~~-----a~~l~~~G~~V~~~~r 44 (265)
T 2o23_A 13 LVAVITGGA-SGLGLAT-----AERLVGQGASAVLLDL 44 (265)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEEC
T ss_pred CEEEEECCC-ChHHHHH-----HHHHHHCCCEEEEEeC
Confidence 789999994 7777654 4567778999887643
No 245
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=39.73 E-value=19 Score=33.54 Aligned_cols=31 Identities=35% Similarity=0.433 Sum_probs=23.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|.++||||- +|||+. +.+.|.++|++|.+.=
T Consensus 12 k~vlITGas-ggiG~~-----la~~l~~~G~~V~~~~ 42 (254)
T 2wsb_A 12 ACAAVTGAG-SGIGLE-----ICRAFAASGARLILID 42 (254)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEe
Confidence 679999985 677764 4556777899887763
No 246
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=39.66 E-value=23 Score=34.07 Aligned_cols=33 Identities=18% Similarity=0.344 Sum_probs=25.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~d 40 (524)
|-++||||- +|||+.++ +.|-++|++|.+.-.+
T Consensus 22 k~vlVTGas-~gIG~aia-----~~La~~G~~V~~~~r~ 54 (272)
T 2nwq_A 22 STLFITGAT-SGFGEACA-----RRFAEAGWSLVLTGRR 54 (272)
T ss_dssp CEEEESSTT-TSSHHHHH-----HHHHHTTCEEEEEESC
T ss_pred cEEEEeCCC-CHHHHHHH-----HHHHHCCCEEEEEECC
Confidence 679999984 89998654 5567789998876443
No 247
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=39.59 E-value=18 Score=34.85 Aligned_cols=31 Identities=32% Similarity=0.535 Sum_probs=23.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|.++||||- +|||+. +.+.|-++|++|.+.-
T Consensus 28 k~vlVTGas-~GIG~a-----ia~~l~~~G~~V~~~~ 58 (277)
T 4dqx_A 28 RVCIVTGGG-SGIGRA-----TAELFAKNGAYVVVAD 58 (277)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEe
Confidence 789999985 777765 4566778899988753
No 248
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=39.54 E-value=98 Score=28.77 Aligned_cols=33 Identities=15% Similarity=0.066 Sum_probs=23.0
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 009814 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (524)
Q Consensus 361 ~~~DGIllpGGfG~rg~eg~i~air~are~~iP~LGI 397 (524)
.++|||++.+... ......++.+.+.++|+.-+
T Consensus 60 ~~vdgiIi~~~~~----~~~~~~~~~~~~~~iPvV~~ 92 (291)
T 3l49_A 60 QKPDAIIEQLGNL----DVLNPWLQKINDAGIPLFTV 92 (291)
T ss_dssp HCCSEEEEESSCH----HHHHHHHHHHHHTTCCEEEE
T ss_pred cCCCEEEEeCCCh----hhhHHHHHHHHHCCCcEEEe
Confidence 5799999876321 22345677788889998765
No 249
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=39.51 E-value=17 Score=35.29 Aligned_cols=31 Identities=32% Similarity=0.353 Sum_probs=23.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|.++||||- +|||+.+ .+.|.++|++|.+.=
T Consensus 10 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~~ 40 (291)
T 1e7w_A 10 PVALVTGAA-KRLGRSI-----AEGLHAEGYAVCLHY 40 (291)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-chHHHHH-----HHHHHHCCCeEEEEc
Confidence 789999985 7888754 456777899987753
No 250
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=39.51 E-value=22 Score=33.36 Aligned_cols=31 Identities=23% Similarity=0.306 Sum_probs=23.9
Q ss_pred EEEEEeCCc-cCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 2 KYVLVTGGV-VSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 2 k~i~vtggv-~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
|.|+||||- -+|||+.++ +.|-.+|++|.+.
T Consensus 15 k~vlITGa~~~~giG~~ia-----~~l~~~G~~V~~~ 46 (271)
T 3ek2_A 15 KRILLTGLLSNRSIAYGIA-----KACKREGAELAFT 46 (271)
T ss_dssp CEEEECCCCSTTSHHHHHH-----HHHHHTTCEEEEE
T ss_pred CEEEEeCCCCCCcHHHHHH-----HHHHHcCCCEEEE
Confidence 789999995 379998654 5666789988765
No 251
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=39.45 E-value=18 Score=34.65 Aligned_cols=33 Identities=30% Similarity=0.447 Sum_probs=25.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~d 40 (524)
|.++||||- ||||+. +.+.|-.+|++|.+.-.+
T Consensus 12 k~~lVTGas-~gIG~a-----ia~~la~~G~~V~~~~~~ 44 (286)
T 3uve_A 12 KVAFVTGAA-RGQGRS-----HAVRLAQEGADIIAVDIC 44 (286)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHTTCEEEEEECC
T ss_pred CEEEEeCCC-chHHHH-----HHHHHHHCCCeEEEEecc
Confidence 789999996 677764 556777889999887544
No 252
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=39.44 E-value=19 Score=33.64 Aligned_cols=30 Identities=37% Similarity=0.579 Sum_probs=22.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
|-|+||||- +|||+.+ .+.|.++|++|.++
T Consensus 15 k~vlITGas-ggiG~~~-----a~~l~~~G~~V~~~ 44 (265)
T 1h5q_A 15 KTIIVTGGN-RGIGLAF-----TRAVAAAGANVAVI 44 (265)
T ss_dssp EEEEEETTT-SHHHHHH-----HHHHHHTTEEEEEE
T ss_pred CEEEEECCC-chHHHHH-----HHHHHHCCCeEEEE
Confidence 789999984 7777644 45666789887765
No 253
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=39.36 E-value=18 Score=35.16 Aligned_cols=34 Identities=24% Similarity=0.428 Sum_probs=25.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dp 41 (524)
|.++||||- ||||+. +.+.|-++|++|.++-.++
T Consensus 29 k~~lVTGas-~GIG~a-----ia~~la~~G~~V~~~~~~~ 62 (299)
T 3t7c_A 29 KVAFITGAA-RGQGRS-----HAITLAREGADIIAIDVCK 62 (299)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHTTCEEEEEECCS
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEeccc
Confidence 789999985 777764 4566778899998865443
No 254
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=39.36 E-value=17 Score=33.85 Aligned_cols=30 Identities=33% Similarity=0.455 Sum_probs=22.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
|.++||||- ||||+.+ .+.|-++|++|.++
T Consensus 8 k~vlITGas-~gIG~~~-----a~~l~~~G~~v~~~ 37 (255)
T 3icc_A 8 KVALVTGAS-RGIGRAI-----AKRLANDGALVAIH 37 (255)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEECCC-ChHHHHH-----HHHHHHCCCeEEEE
Confidence 789999996 7777654 45566789887653
No 255
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=39.21 E-value=18 Score=35.23 Aligned_cols=30 Identities=30% Similarity=0.482 Sum_probs=23.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
|-++||||- ||||+.+ .+.|-++|++|.+.
T Consensus 32 k~vlVTGas-~gIG~~l-----a~~l~~~G~~V~~~ 61 (301)
T 3tjr_A 32 RAAVVTGGA-SGIGLAT-----ATEFARRGARLVLS 61 (301)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHCCCEEEEE
Confidence 679999997 7888754 56677789988775
No 256
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=39.21 E-value=21 Score=34.45 Aligned_cols=30 Identities=30% Similarity=0.570 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
|-++||||- +|||+. +.+.|.++|++|.+.
T Consensus 33 k~~lVTGas-~GIG~a-----ia~~la~~G~~V~~~ 62 (276)
T 3r1i_A 33 KRALITGAS-TGIGKK-----VALAYAEAGAQVAVA 62 (276)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-CHHHHH-----HHHHHHHCCCEEEEE
Confidence 789999996 788865 456677889998775
No 257
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=39.12 E-value=27 Score=31.72 Aligned_cols=34 Identities=21% Similarity=0.290 Sum_probs=24.9
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dp 41 (524)
|| |+||||- +++|+ .+.+.|.++|++|..+-.+|
T Consensus 1 M~-ilItGat-G~iG~-----~l~~~L~~~g~~V~~~~R~~ 34 (219)
T 3dqp_A 1 MK-IFIVGST-GRVGK-----SLLKSLSTTDYQIYAGARKV 34 (219)
T ss_dssp CE-EEEESTT-SHHHH-----HHHHHHTTSSCEEEEEESSG
T ss_pred Ce-EEEECCC-CHHHH-----HHHHHHHHCCCEEEEEECCc
Confidence 55 8999975 45554 55567778899999887665
No 258
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=39.02 E-value=23 Score=33.42 Aligned_cols=33 Identities=27% Similarity=0.243 Sum_probs=25.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
|.++||||-=||||+.+ .+.|-.+|++|.+.-.
T Consensus 23 k~vlITGasg~GIG~~~-----a~~l~~~G~~V~~~~r 55 (266)
T 3o38_A 23 KVVLVTAAAGTGIGSTT-----ARRALLEGADVVISDY 55 (266)
T ss_dssp CEEEESSCSSSSHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCCchHHHH-----HHHHHHCCCEEEEecC
Confidence 78999999767888754 5567778998887644
No 259
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=39.01 E-value=19 Score=34.66 Aligned_cols=33 Identities=33% Similarity=0.361 Sum_probs=24.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~d 40 (524)
|-++||||- +|||+.+ .+.|-++|++|.+.=.+
T Consensus 17 k~vlVTGas-~gIG~~~-----a~~L~~~G~~V~~~~r~ 49 (291)
T 3rd5_A 17 RTVVITGAN-SGLGAVT-----ARELARRGATVIMAVRD 49 (291)
T ss_dssp CEEEEECCS-SHHHHHH-----HHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCC-ChHHHHH-----HHHHHHCCCEEEEEECC
Confidence 679999997 7787654 46677889998876443
No 260
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=38.96 E-value=19 Score=34.33 Aligned_cols=32 Identities=28% Similarity=0.507 Sum_probs=24.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
|.++||||- +|||+.+ .+.|-.+|++|.++-.
T Consensus 14 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r 45 (278)
T 3sx2_A 14 KVAFITGAA-RGQGRAH-----AVRLAADGADIIAVDL 45 (278)
T ss_dssp CEEEEESTT-SHHHHHH-----HHHHHHTTCEEEEEEC
T ss_pred CEEEEECCC-ChHHHHH-----HHHHHHCCCeEEEEec
Confidence 789999985 7777654 5567788999987643
No 261
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=38.96 E-value=18 Score=33.46 Aligned_cols=29 Identities=38% Similarity=0.599 Sum_probs=21.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~ 36 (524)
|.|+||||- +|||+. +.+.|.++|++|.+
T Consensus 2 k~vlVTGas-ggiG~~-----la~~l~~~G~~v~~ 30 (244)
T 1edo_A 2 PVVVVTGAS-RGIGKA-----IALSLGKAGCKVLV 30 (244)
T ss_dssp CEEEETTCS-SHHHHH-----HHHHHHHTTCEEEE
T ss_pred CEEEEeCCC-chHHHH-----HHHHHHHCCCEEEE
Confidence 679999985 677764 45567778998876
No 262
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=38.93 E-value=17 Score=34.52 Aligned_cols=32 Identities=31% Similarity=0.536 Sum_probs=24.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
|.++||||- +|||+.+ .+.|.++|++|.+.=.
T Consensus 7 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r 38 (278)
T 1spx_A 7 KVAIITGSS-NGIGRAT-----AVLFAREGAKVTITGR 38 (278)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-chHHHHH-----HHHHHHCCCEEEEEeC
Confidence 789999985 7787755 4566778999887643
No 263
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=38.83 E-value=18 Score=34.12 Aligned_cols=31 Identities=29% Similarity=0.520 Sum_probs=23.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|.++||||- +|||+.+ .+.|-++|++|.+.-
T Consensus 6 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~ 36 (260)
T 2qq5_A 6 QVCVVTGAS-RGIGRGI-----ALQLCKAGATVYITG 36 (260)
T ss_dssp CEEEESSTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-chHHHHH-----HHHHHHCCCEEEEEe
Confidence 789999984 7777754 456777899887753
No 264
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=38.68 E-value=16 Score=34.86 Aligned_cols=33 Identities=24% Similarity=0.242 Sum_probs=24.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~d 40 (524)
|-++||||- +|||+. +.+.|-++|++|.+.-.+
T Consensus 28 k~vlVTGas-~gIG~a-----ia~~l~~~G~~V~~~~r~ 60 (260)
T 3gem_A 28 APILITGAS-QRVGLH-----CALRLLEHGHRVIISYRT 60 (260)
T ss_dssp CCEEESSTT-SHHHHH-----HHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEeCC
Confidence 679999985 777764 445677789998876443
No 265
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=38.64 E-value=19 Score=34.59 Aligned_cols=30 Identities=33% Similarity=0.481 Sum_probs=22.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
|.++||||- +|||+.+ .+.|-++|++|.+.
T Consensus 32 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~ 61 (271)
T 3v2g_A 32 KTAFVTGGS-RGIGAAI-----AKRLALEGAAVALT 61 (271)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEE
Confidence 789999985 7787754 45677789988654
No 266
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=38.53 E-value=21 Score=34.05 Aligned_cols=33 Identities=27% Similarity=0.451 Sum_probs=24.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~d 40 (524)
|-++||||- +|||+. +.+.|.++|++|.+.-.+
T Consensus 29 k~vlVTGas-~gIG~a-----ia~~l~~~G~~V~~~~r~ 61 (260)
T 3un1_A 29 KVVVITGAS-QGIGAG-----LVRAYRDRNYRVVATSRS 61 (260)
T ss_dssp CEEEESSCS-SHHHHH-----HHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCC-CHHHHH-----HHHHHHHCCCEEEEEeCC
Confidence 779999985 777764 445677789999886543
No 267
>4tmk_A Protein (thymidylate kinase); ATP:DTMP phosphotransferase, transferase; HET: T5A; 1.98A {Escherichia coli} SCOP: c.37.1.1 PDB: 5tmp_A*
Probab=38.53 E-value=32 Score=32.34 Aligned_cols=33 Identities=24% Similarity=0.459 Sum_probs=28.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCC-eeEE
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGL-RVTC 36 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~-~v~~ 36 (524)
+||.+.|. +|-||+..+..|...|+.+|+ .|..
T Consensus 4 ~~i~~eG~--~gsGKsT~~~~l~~~l~~~~~~~v~~ 37 (213)
T 4tmk_A 4 KYIVIEGL--EGAGKTTARNVVVETLEQLGIRDMVF 37 (213)
T ss_dssp CEEEEEEC--TTSCHHHHHHHHHHHHHHTTCCCEEE
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHHHcCCCccee
Confidence 68999985 799999999999999999998 5543
No 268
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=38.53 E-value=20 Score=33.81 Aligned_cols=34 Identities=32% Similarity=0.391 Sum_probs=25.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dp 41 (524)
|-|+||||- +|||+.+ .+.|.++|++|.+.-.++
T Consensus 20 k~vlVTGas-~gIG~~~-----a~~l~~~G~~V~~~~r~~ 53 (249)
T 1o5i_A 20 KGVLVLAAS-RGIGRAV-----ADVLSQEGAEVTICARNE 53 (249)
T ss_dssp CEEEEESCS-SHHHHHH-----HHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEEcCCH
Confidence 679999995 7777754 456677899998875554
No 269
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=38.39 E-value=18 Score=34.74 Aligned_cols=30 Identities=27% Similarity=0.463 Sum_probs=22.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
|.++||||- ||||+.+ .+.|-++|++|.+.
T Consensus 29 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~ 58 (270)
T 3ftp_A 29 QVAIVTGAS-RGIGRAI-----ALELARRGAMVIGT 58 (270)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEE
Confidence 789999985 7787755 45677889988765
No 270
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=38.15 E-value=20 Score=33.84 Aligned_cols=31 Identities=29% Similarity=0.545 Sum_probs=23.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|.++||||- +|||+.+ .+.|.++|++|.+.-
T Consensus 13 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~ 43 (263)
T 3ak4_A 13 RKAIVTGGS-KGIGAAI-----ARALDKAGATVAIAD 43 (263)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-ChHHHHH-----HHHHHHCCCEEEEEe
Confidence 679999985 7777654 456777899988753
No 271
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=38.10 E-value=20 Score=33.74 Aligned_cols=31 Identities=35% Similarity=0.520 Sum_probs=23.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|.++||||- +|||+.+ .+.|.++|++|.+.-
T Consensus 3 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~ 33 (256)
T 1geg_A 3 KVALVTGAG-QGIGKAI-----ALRLVKDGFAVAIAD 33 (256)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-ChHHHHH-----HHHHHHCCCEEEEEe
Confidence 789999985 7777654 456777899887753
No 272
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=37.81 E-value=20 Score=33.73 Aligned_cols=30 Identities=37% Similarity=0.588 Sum_probs=22.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
|-++||||- +|||+.+ .+.|.++|++|.+.
T Consensus 5 k~vlVTGas-~giG~~i-----a~~l~~~G~~V~~~ 34 (255)
T 2q2v_A 5 KTALVTGST-SGIGLGI-----AQVLARAGANIVLN 34 (255)
T ss_dssp CEEEESSCS-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEE
Confidence 779999985 7777754 45677789988764
No 273
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=37.81 E-value=22 Score=34.43 Aligned_cols=32 Identities=31% Similarity=0.608 Sum_probs=23.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
|.++||||- +|||+. +.+.|-++|++|.+.-.
T Consensus 48 k~vlVTGas-~GIG~a-----ia~~la~~G~~V~~~~r 79 (291)
T 3ijr_A 48 KNVLITGGD-SGIGRA-----VSIAFAKEGANIAIAYL 79 (291)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 789999984 777765 45667788999877533
No 274
>1uuy_A CNX1, molybdopterin biosynthesis CNX1; chelatase, molybdenum cofactor biosynthesis; HET: MTE AMP; 1.45A {Arabidopsis thaliana} SCOP: c.57.1.1 PDB: 1o8q_A 1o8n_A 1o8o_A 1uux_A* 1eav_A
Probab=37.65 E-value=57 Score=29.27 Aligned_cols=47 Identities=28% Similarity=0.444 Sum_probs=34.0
Q ss_pred eEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCcc-ccccCcchHHHHHHHh
Q 009814 111 VQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGT-IGDIESMPFIEALGQF 166 (524)
Q Consensus 111 vqviphit~ei~~~i~~~~~~~~d~~~~~~d~~i~eiggt-vgdies~pf~ea~rq~ 166 (524)
..+||.=-++|++.|++++. ..++|++|+ .||| +|+-.=.| ||++++
T Consensus 49 ~~iv~Dd~~~i~~~l~~~~~------~~~~DlVit-tGG~g~g~~D~t~--~a~~~~ 96 (167)
T 1uuy_A 49 TAVVPDEVERIKDILQKWSD------VDEMDLILT-LGGTGFTPRDVTP--EATKKV 96 (167)
T ss_dssp EEEECSCHHHHHHHHHHHHH------TSCCSEEEE-ESCCSSSTTCCHH--HHHHHH
T ss_pred EEEcCCCHHHHHHHHHHHHh------cCCCCEEEE-CCCCCCCCCCchH--HHHHHH
Confidence 45778777899999998862 236898766 7887 66544445 899887
No 275
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=37.53 E-value=21 Score=34.20 Aligned_cols=32 Identities=38% Similarity=0.537 Sum_probs=23.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
|.++||||- +|||+.+ .+.|.++|++|.+.-.
T Consensus 10 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r 41 (270)
T 1yde_A 10 KVVVVTGGG-RGIGAGI-----VRAFVNSGARVVICDK 41 (270)
T ss_dssp CEEEEETCS-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-cHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 689999985 7777654 4567778999887643
No 276
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=37.45 E-value=21 Score=33.71 Aligned_cols=31 Identities=35% Similarity=0.470 Sum_probs=23.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|-++||||- +|||+.+ .+.|.++|++|.+.=
T Consensus 8 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~ 38 (260)
T 2z1n_A 8 KLAVVTAGS-SGLGFAS-----ALELARNGARLLLFS 38 (260)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-chHHHHH-----HHHHHHCCCEEEEEe
Confidence 679999985 7777654 456677899887753
No 277
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=37.25 E-value=19 Score=34.71 Aligned_cols=32 Identities=28% Similarity=0.417 Sum_probs=23.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
|.++||||- +|||+.++ +.|-.+|++|.+.-.
T Consensus 24 k~~lVTGas-~gIG~aia-----~~L~~~G~~V~~~~r 55 (288)
T 2x9g_A 24 PAAVVTGAA-KRIGRAIA-----VKLHQTGYRVVIHYH 55 (288)
T ss_dssp CEEEETTCS-SHHHHHHH-----HHHHHHTCEEEEEES
T ss_pred CEEEEeCCC-CHHHHHHH-----HHHHHCCCeEEEEeC
Confidence 679999986 88887654 456667998877543
No 278
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=37.16 E-value=21 Score=33.69 Aligned_cols=32 Identities=28% Similarity=0.439 Sum_probs=24.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
|-++||||- +|||+. +.+.|-++|++|.+.-.
T Consensus 9 k~vlVTGas-~gIG~~-----ia~~l~~~G~~V~~~~r 40 (259)
T 4e6p_A 9 KSALITGSA-RGIGRA-----FAEAYVREGATVAIADI 40 (259)
T ss_dssp CEEEEETCS-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 779999985 777765 45667788999887633
No 279
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=37.15 E-value=21 Score=34.49 Aligned_cols=31 Identities=32% Similarity=0.536 Sum_probs=23.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|.++||||- ||||+.+ .+.|-++|++|.+.-
T Consensus 29 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~~ 59 (283)
T 3v8b_A 29 PVALITGAG-SGIGRAT-----ALALAADGVTVGALG 59 (283)
T ss_dssp CEEEEESCS-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEEe
Confidence 679999985 7777654 466777899887653
No 280
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=37.12 E-value=21 Score=34.36 Aligned_cols=30 Identities=27% Similarity=0.416 Sum_probs=22.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
|-++||||- +|||+.+ .+.|-++|++|.+.
T Consensus 32 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~ 61 (273)
T 3uf0_A 32 RTAVVTGAG-SGIGRAI-----AHGYARAGAHVLAW 61 (273)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEE
Confidence 679999995 7788754 45667789987654
No 281
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=37.04 E-value=1.4e+02 Score=27.91 Aligned_cols=33 Identities=15% Similarity=0.120 Sum_probs=22.4
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 009814 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (524)
Q Consensus 361 ~~~DGIllpGGfG~rg~eg~i~air~are~~iP~LGI 397 (524)
.++|||++.+.- . ......++.+.+.++|+.-+
T Consensus 56 ~~vdgiii~~~~--~--~~~~~~~~~~~~~~iPvV~~ 88 (306)
T 8abp_A 56 SGAKGFVICTPD--P--KLGSAIVAKARGYDMKVIAV 88 (306)
T ss_dssp TTCCEEEEECSC--G--GGHHHHHHHHHHTTCEEEEE
T ss_pred cCCCEEEEeCCC--c--hhhHHHHHHHHHCCCcEEEe
Confidence 579999887631 1 22334577788889998654
No 282
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=36.89 E-value=21 Score=34.14 Aligned_cols=33 Identities=42% Similarity=0.614 Sum_probs=24.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~d 40 (524)
|-++||||- +|||+. +.+.|-++|++|.+.-.+
T Consensus 12 k~vlVTGas-~gIG~a-----ia~~l~~~G~~V~~~~r~ 44 (281)
T 3svt_A 12 RTYLVTGGG-SGIGKG-----VAAGLVAAGASVMIVGRN 44 (281)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEEeCC
Confidence 679999984 777765 446677789988776433
No 283
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=36.86 E-value=17 Score=34.57 Aligned_cols=30 Identities=17% Similarity=0.321 Sum_probs=23.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
|.++||||- ||||+.+ .+.|-++|++|.+.
T Consensus 12 k~vlVTGas-~GIG~ai-----a~~la~~G~~V~~~ 41 (262)
T 3ksu_A 12 KVIVIAGGI-KNLGALT-----AKTFALESVNLVLH 41 (262)
T ss_dssp CEEEEETCS-SHHHHHH-----HHHHTTSSCEEEEE
T ss_pred CEEEEECCC-chHHHHH-----HHHHHHCCCEEEEE
Confidence 789999986 7887654 46677789888764
No 284
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=36.78 E-value=31 Score=31.19 Aligned_cols=45 Identities=24% Similarity=0.368 Sum_probs=33.5
Q ss_pred eEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCcc-ccccCcchHHHHHHHh
Q 009814 111 VQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGT-IGDIESMPFIEALGQF 166 (524)
Q Consensus 111 vqviphit~ei~~~i~~~~~~~~d~~~~~~d~~i~eiggt-vgdies~pf~ea~rq~ 166 (524)
..++|-= ++|++.|+++. ..++|++|+ .||| +|+--=.| ||++++
T Consensus 46 ~~iv~Dd-~~i~~al~~a~-------~~~~DlVit-tGG~s~g~~D~t~--eal~~~ 91 (164)
T 3pzy_A 46 PEVVADG-SPVGEALRKAI-------DDDVDVILT-SGGTGIAPTDSTP--DQTVAV 91 (164)
T ss_dssp CEEECSS-HHHHHHHHHHH-------HTTCSEEEE-ESCCSSSTTCCHH--HHHHTT
T ss_pred EEEeCCH-HHHHHHHHHHH-------hCCCCEEEE-CCCCCCCCCccHH--HHHHHH
Confidence 4678888 89999998875 236898887 7887 66655555 888876
No 285
>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}
Probab=36.74 E-value=26 Score=34.27 Aligned_cols=33 Identities=33% Similarity=0.419 Sum_probs=25.9
Q ss_pred EEEEEeCCc-cCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 2 KYVLVTGGV-VSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 2 k~i~vtggv-~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
|.++||||- -||||+.++ +.|-.+|++|.+.-.
T Consensus 10 k~~lVTGa~~s~GIG~aia-----~~la~~G~~Vv~~~r 43 (319)
T 2ptg_A 10 KTAFVAGVADSNGYGWAIC-----KLLRAAGARVLVGTW 43 (319)
T ss_dssp CEEEEECCCCTTSHHHHHH-----HHHHHTTCEEEEEEC
T ss_pred CEEEEeCCCCCCcHHHHHH-----HHHHHCCCEEEEEec
Confidence 689999995 899998654 557778999887643
No 286
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=36.73 E-value=22 Score=34.35 Aligned_cols=33 Identities=24% Similarity=0.461 Sum_probs=24.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~d 40 (524)
|.++||||- ||||+.+ .+.|-++|++|.+.=.+
T Consensus 10 k~vlVTGas-~GIG~ai-----a~~l~~~G~~V~~~~r~ 42 (285)
T 3sc4_A 10 KTMFISGGS-RGIGLAI-----AKRVAADGANVALVAKS 42 (285)
T ss_dssp CEEEEESCS-SHHHHHH-----HHHHHTTTCEEEEEESC
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEEECC
Confidence 789999986 7888754 46677789988776443
No 287
>1xx6_A Thymidine kinase; NESG, northeast structural genomics consortium, protein STRU initiative, PSI, structural genomics, DNA synthesis; HET: ADP; 2.00A {Clostridium acetobutylicum} SCOP: c.37.1.24 g.39.1.14
Probab=36.73 E-value=35 Score=31.57 Aligned_cols=33 Identities=15% Similarity=0.217 Sum_probs=26.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHH--CCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKA--CGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~--~g~~v~~~k 38 (524)
|.+|+||- -|+|-|.+.++++.+. +|.+|-++|
T Consensus 9 ~i~v~~G~----mgsGKTT~ll~~a~r~~~~g~kV~v~k 43 (191)
T 1xx6_A 9 WVEVIVGP----MYSGKSEELIRRIRRAKIAKQKIQVFK 43 (191)
T ss_dssp EEEEEECS----TTSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEEECC----CCCcHHHHHHHHHHHHHHCCCEEEEEE
Confidence 56777774 3666788888887665 999999998
No 288
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=36.69 E-value=21 Score=34.29 Aligned_cols=32 Identities=31% Similarity=0.468 Sum_probs=23.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
|.++||||- +|||+-++ +.|.++|++|.+.-.
T Consensus 29 k~vlITGas-ggIG~~la-----~~l~~~G~~V~~~~r 60 (286)
T 1xu9_A 29 KKVIVTGAS-KGIGREMA-----YHLAKMGAHVVVTAR 60 (286)
T ss_dssp CEEEESSCS-SHHHHHHH-----HHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-cHHHHHHH-----HHHHHCCCEEEEEEC
Confidence 679999985 77777554 556678998887643
No 289
>2plr_A DTMP kinase, probable thymidylate kinase; TMP-binding, ATP-binding, structural GEN NPPSFA; HET: 1PE PGE EPE PG4; 1.60A {Sulfolobus tokodaii}
Probab=36.67 E-value=36 Score=30.31 Aligned_cols=30 Identities=20% Similarity=0.207 Sum_probs=25.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRV 34 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v 34 (524)
+.|+++|. +|-||+..|..|...|...| +|
T Consensus 5 ~~I~i~G~--~GsGKsT~~~~L~~~l~~~g-~~ 34 (213)
T 2plr_A 5 VLIAFEGI--DGSGKSSQATLLKDWIELKR-DV 34 (213)
T ss_dssp EEEEEECC--TTSSHHHHHHHHHHHHTTTS-CE
T ss_pred eEEEEEcC--CCCCHHHHHHHHHHHHhhcC-CE
Confidence 68999996 78899999999998887666 44
No 290
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=36.63 E-value=37 Score=31.73 Aligned_cols=71 Identities=15% Similarity=0.163 Sum_probs=48.9
Q ss_pred CCcEEEEeeCccccccCcchHHHHHHHhhhhcCCCCEEEEEeeeeeeecCCCccccCCchhhHHHhhcCCCcccEEEEec
Q 009814 139 PVDVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRS 218 (524)
Q Consensus 139 ~~d~~i~eiggtvgdies~pf~ea~rq~~~~~~~~n~~~ih~~~vp~~~~~~e~ktkptq~sv~~lrs~Gi~pd~lv~R~ 218 (524)
++|++++|+||. + -+-. |...++..+++...++.+|.+-- ++.. ...|.+.-.+++++.++.++-+.++.
T Consensus 138 ~~Dvlil~~g~~-~---h~~~-~~a~~~~~~~~~k~vi~~H~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (220)
T 1vjn_A 138 EIDVLLVPVGGT-Y---TIGP-KEAKEVADLLNAKVIIPMHYKTK-YLKF----NLLPVDDFLKLFDSYERVGNILELFE 207 (220)
T ss_dssp CCSEEEEECCSS-S---SCCH-HHHHHHHHHTTCSEEEEESCCCS-SCCT----TCCCTHHHHTTSSCCEECCSEEEESS
T ss_pred CCCEEEEcCCCc-C---cCCH-HHHHHHHHhcCCCEEEEEecccc-cccC----CchhHHHHHHHHHhcCCCccceEEec
Confidence 689999999875 2 2333 33344455677888999999763 3321 15678888888888888877777775
Q ss_pred C
Q 009814 219 T 219 (524)
Q Consensus 219 ~ 219 (524)
.
T Consensus 208 ~ 208 (220)
T 1vjn_A 208 K 208 (220)
T ss_dssp C
T ss_pred C
Confidence 5
No 291
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=36.63 E-value=22 Score=33.34 Aligned_cols=32 Identities=34% Similarity=0.574 Sum_probs=24.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
|.++||||- +|||+.++ +.|.++|++|.+.-.
T Consensus 6 k~vlVTGas-~giG~~ia-----~~l~~~G~~V~~~~r 37 (245)
T 1uls_A 6 KAVLITGAA-HGIGRATL-----ELFAKEGARLVACDI 37 (245)
T ss_dssp CEEEEESTT-SHHHHHHH-----HHHHHTTCEEEEEES
T ss_pred CEEEEECCC-CHHHHHHH-----HHHHHCCCEEEEEeC
Confidence 779999984 77877654 566778999887643
No 292
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=36.37 E-value=24 Score=34.16 Aligned_cols=30 Identities=33% Similarity=0.481 Sum_probs=23.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
|-++||||- ||||+.+ .+.|-+.|.+|.+.
T Consensus 8 KvalVTGas-~GIG~ai-----a~~la~~Ga~Vv~~ 37 (258)
T 4gkb_A 8 KVVIVTGGA-SGIGGAI-----SMRLAEERAIPVVF 37 (258)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHcCCEEEEE
Confidence 789999985 8888765 45677788887664
No 293
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=36.30 E-value=21 Score=33.45 Aligned_cols=29 Identities=34% Similarity=0.594 Sum_probs=22.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~ 36 (524)
|-++||||- ||||+.+ .+.|-++|++|.+
T Consensus 5 k~~lVTGas-~gIG~~i-----a~~l~~~G~~V~~ 33 (246)
T 3osu_A 5 KSALVTGAS-RGIGRSI-----ALQLAEEGYNVAV 33 (246)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEE
T ss_pred CEEEEECCC-ChHHHHH-----HHHHHHCCCEEEE
Confidence 789999985 7777654 4667778988765
No 294
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=36.29 E-value=22 Score=34.74 Aligned_cols=33 Identities=33% Similarity=0.669 Sum_probs=24.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~d 40 (524)
|-++||||- +|||+.+ .+.|-.+|++|.+.-.+
T Consensus 42 k~vlVTGas-~GIG~ai-----a~~la~~G~~V~~~~r~ 74 (293)
T 3rih_A 42 RSVLVTGGT-KGIGRGI-----ATVFARAGANVAVAARS 74 (293)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEEECC
Confidence 679999995 7777754 46677889988876443
No 295
>3bch_A 40S ribosomal protein SA; laminin receptor, P40 ribosomal protein, acetylation, cytoplasm, phosphorylation, polymorphism; 2.15A {Homo sapiens}
Probab=36.22 E-value=1.1e+02 Score=29.90 Aligned_cols=77 Identities=9% Similarity=0.185 Sum_probs=47.8
Q ss_pred eEEEEEeccCCCcchHHHHHHHHHHcCCceeEEeeeEEeeCCCccccccCCChhhhhHHHHhccCCCEEEECCCCCCCch
Q 009814 298 VRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGV 377 (524)
Q Consensus 298 v~IaiVGkY~~~~day~SI~~aL~~ag~~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~l~~~DGIllpGGfG~rg~ 377 (524)
-+|.+||-- ..+...|.++-+.+|+... +-.|++- .|+.... ..+..||.|||..-
T Consensus 105 ~~iLfVgTk---~~aq~~V~~~A~~~g~~yv---~~RWlgG-~LTN~~~-----------~~f~~PdlliV~Dp------ 160 (253)
T 3bch_A 105 ADVSVISSR---NTGQRAVLKFAAATGATPI---AGRFTPG-TFTNQIQ-----------AAFREPRLLVVTDP------ 160 (253)
T ss_dssp GGEEEEECS---HHHHHHHHHHHHHHCCEEE---ESCCCTT-TTTCCSC-----------STTCSCSEEEESCT------
T ss_pred CeEEEEeCC---HHHHHHHHHHHHHhCCeee---cceecCC-cccCccc-----------cccCCCCEEEEECC------
Confidence 357777611 1234556666666676443 3468654 2432110 13467999998862
Q ss_pred hHHHHHHHHHHHcCCCEEEEh
Q 009814 378 QGKILAAKYAREHRIPYLGIC 398 (524)
Q Consensus 378 eg~i~air~are~~iP~LGIC 398 (524)
.....++++|..-+||+.|||
T Consensus 161 ~~e~~AI~EA~~lgIPvIalv 181 (253)
T 3bch_A 161 RADHQPLTEASYVNLPTIALC 181 (253)
T ss_dssp TTTHHHHHHHHHTTCCEEEEE
T ss_pred CccchHHHHHHHhCCCEEEEE
Confidence 123578999999999999998
No 296
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=36.19 E-value=22 Score=34.12 Aligned_cols=31 Identities=35% Similarity=0.407 Sum_probs=23.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|-++||||- +|||+.+ .+.|-++|++|.+.-
T Consensus 25 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~~ 55 (279)
T 3sju_A 25 QTAFVTGVS-SGIGLAV-----ARTLAARGIAVYGCA 55 (279)
T ss_dssp CEEEEESTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHCCCEEEEEe
Confidence 789999985 7777654 456667899887654
No 297
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=36.18 E-value=23 Score=34.15 Aligned_cols=29 Identities=31% Similarity=0.513 Sum_probs=22.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~ 36 (524)
|-++||||- ||||+. +.+.|-++|++|.+
T Consensus 26 k~~lVTGas-~GIG~~-----ia~~la~~G~~V~~ 54 (281)
T 3v2h_A 26 KTAVITGST-SGIGLA-----IARTLAKAGANIVL 54 (281)
T ss_dssp CEEEEETCS-SHHHHH-----HHHHHHHTTCEEEE
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEE
Confidence 779999985 777764 45667788998876
No 298
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=36.14 E-value=21 Score=34.05 Aligned_cols=29 Identities=41% Similarity=0.568 Sum_probs=22.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~ 36 (524)
|-++||||- ||||+.+ .+.|-++|++|.+
T Consensus 19 k~~lVTGas-~gIG~ai-----a~~l~~~G~~V~~ 47 (270)
T 3is3_A 19 KVALVTGSG-RGIGAAV-----AVHLGRLGAKVVV 47 (270)
T ss_dssp CEEEESCTT-SHHHHHH-----HHHHHHTTCEEEE
T ss_pred CEEEEECCC-chHHHHH-----HHHHHHCCCEEEE
Confidence 789999985 7787754 4667788998865
No 299
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=36.13 E-value=22 Score=34.51 Aligned_cols=32 Identities=28% Similarity=0.465 Sum_probs=24.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
|-++||||- ||||+.++ +.|-+.|.+|.+.-.
T Consensus 8 KvalVTGas-~GIG~aiA-----~~la~~Ga~Vv~~~~ 39 (254)
T 4fn4_A 8 KVVIVTGAG-SGIGRAIA-----KKFALNDSIVVAVEL 39 (254)
T ss_dssp CEEEEETTT-SHHHHHHH-----HHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-CHHHHHHH-----HHHHHcCCEEEEEEC
Confidence 789999984 78888754 567788998877544
No 300
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=36.12 E-value=22 Score=32.63 Aligned_cols=33 Identities=27% Similarity=0.294 Sum_probs=23.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCC--CeeEEeeec
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACG--LRVTCIKID 40 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g--~~v~~~k~d 40 (524)
|.|+||||- +|||+.+ .+.|..+| ++|.++-.+
T Consensus 4 k~vlItGas-ggiG~~l-----a~~l~~~g~~~~V~~~~r~ 38 (250)
T 1yo6_A 4 GSVVVTGAN-RGIGLGL-----VQQLVKDKNIRHIIATARD 38 (250)
T ss_dssp SEEEESSCS-SHHHHHH-----HHHHHTCTTCCEEEEEESS
T ss_pred CEEEEecCC-chHHHHH-----HHHHHhcCCCcEEEEEecC
Confidence 689999984 7777654 45566788 888876544
No 301
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=36.03 E-value=22 Score=33.66 Aligned_cols=30 Identities=17% Similarity=0.354 Sum_probs=22.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
|-++||||- ||||+. +.+.|-++|++|.+.
T Consensus 9 k~vlVTGas-~GIG~a-----ia~~la~~G~~V~~~ 38 (259)
T 3edm_A 9 RTIVVAGAG-RDIGRA-----CAIRFAQEGANVVLT 38 (259)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEECCC-chHHHH-----HHHHHHHCCCEEEEE
Confidence 689999985 777765 445677789987654
No 302
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=35.86 E-value=21 Score=34.04 Aligned_cols=30 Identities=40% Similarity=0.561 Sum_probs=22.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
|.|+||||- +|||+. +.+.|-++|++|.+.
T Consensus 30 k~vlITGas-~gIG~~-----la~~l~~~G~~V~~~ 59 (271)
T 4iin_A 30 KNVLITGAS-KGIGAE-----IAKTLASMGLKVWIN 59 (271)
T ss_dssp CEEEETTCS-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEE
Confidence 679999985 677764 445666789988764
No 303
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=35.84 E-value=23 Score=34.38 Aligned_cols=30 Identities=43% Similarity=0.725 Sum_probs=24.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
|-++||||- ||||+.| .+.|-+.|.+|.+.
T Consensus 10 KvalVTGas-~GIG~ai-----A~~la~~Ga~Vvi~ 39 (247)
T 4hp8_A 10 RKALVTGAN-TGLGQAI-----AVGLAAAGAEVVCA 39 (247)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCcC-CHHHHHH-----HHHHHHcCCEEEEE
Confidence 679999985 8898865 46788899999764
No 304
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=35.79 E-value=24 Score=32.30 Aligned_cols=34 Identities=44% Similarity=0.734 Sum_probs=25.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dp 41 (524)
|-|+||||- ++||+.+ .+.|.++|++|.+.-.++
T Consensus 3 k~vlVtGas-ggiG~~l-----a~~l~~~G~~V~~~~r~~ 36 (242)
T 1uay_A 3 RSALVTGGA-SGLGRAA-----ALALKARGYRVVVLDLRR 36 (242)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHHTCEEEEEESSC
T ss_pred CEEEEeCCC-ChHHHHH-----HHHHHHCCCEEEEEccCc
Confidence 679999985 7777654 456667899998865443
No 305
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=35.51 E-value=23 Score=33.69 Aligned_cols=32 Identities=22% Similarity=0.310 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
|-|+||||- +|||+. +.+.|.++|++|.+.-.
T Consensus 32 k~vlITGas-ggIG~~-----la~~L~~~G~~V~~~~r 63 (272)
T 1yb1_A 32 EIVLITGAG-HGIGRL-----TAYEFAKLKSKLVLWDI 63 (272)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-chHHHH-----HHHHHHHCCCEEEEEEc
Confidence 679999985 677764 45667778998877643
No 306
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=35.49 E-value=21 Score=34.55 Aligned_cols=31 Identities=29% Similarity=0.388 Sum_probs=24.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|-++||||- ||||+.+ .+.|-+.|.+|.+.-
T Consensus 12 K~alVTGas-~GIG~ai-----a~~la~~Ga~V~~~~ 42 (261)
T 4h15_A 12 KRALITAGT-KGAGAAT-----VSLFLELGAQVLTTA 42 (261)
T ss_dssp CEEEESCCS-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEeccC-cHHHHHH-----HHHHHHcCCEEEEEE
Confidence 789999984 7888764 567889999997753
No 307
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=35.44 E-value=31 Score=32.69 Aligned_cols=32 Identities=19% Similarity=0.250 Sum_probs=25.0
Q ss_pred EEEEEeCCc-cCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGV-VSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv-~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|-++||||- -+|||+.++ +.|.++|++|.+.=
T Consensus 8 k~vlVTGa~~s~gIG~aia-----~~l~~~G~~V~~~~ 40 (269)
T 2h7i_A 8 KRILVSGIITDSSIAFHIA-----RVAQEQGAQLVLTG 40 (269)
T ss_dssp CEEEECCCSSTTSHHHHHH-----HHHHHTTCEEEEEE
T ss_pred CEEEEECCCCCCchHHHHH-----HHHHHCCCEEEEEe
Confidence 679999994 789998654 56777899887753
No 308
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=35.42 E-value=1.2e+02 Score=28.38 Aligned_cols=33 Identities=18% Similarity=0.100 Sum_probs=22.3
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 009814 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (524)
Q Consensus 361 ~~~DGIllpGGfG~rg~eg~i~air~are~~iP~LGI 397 (524)
.++|||++.+.... .. ...++.+.+.++|+.-+
T Consensus 60 ~~vdgiIi~~~~~~-~~---~~~~~~~~~~~iPvV~~ 92 (305)
T 3g1w_A 60 KNPAGIAISAIDPV-EL---TDTINKAVDAGIPIVLF 92 (305)
T ss_dssp HCCSEEEECCSSTT-TT---HHHHHHHHHTTCCEEEE
T ss_pred hCCCEEEEcCCCHH-HH---HHHHHHHHHCCCcEEEE
Confidence 57999999774321 22 34567777889998754
No 309
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=35.40 E-value=24 Score=33.71 Aligned_cols=32 Identities=34% Similarity=0.421 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
|.++|||| -+|||+.+ .+.|..+|++|.+.-.
T Consensus 22 k~vlVTGa-s~gIG~ai-----a~~l~~~G~~V~~~~r 53 (273)
T 1ae1_A 22 TTALVTGG-SKGIGYAI-----VEELAGLGARVYTCSR 53 (273)
T ss_dssp CEEEEESC-SSHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEECC-cchHHHHH-----HHHHHHCCCEEEEEeC
Confidence 67999998 47777754 4566778998877533
No 310
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=35.36 E-value=23 Score=33.41 Aligned_cols=31 Identities=29% Similarity=0.380 Sum_probs=23.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|.++||||- +|||+.+ .+.|.++|++|.+.-
T Consensus 15 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~ 45 (260)
T 2zat_A 15 KVALVTAST-DGIGLAI-----ARRLAQDGAHVVVSS 45 (260)
T ss_dssp CEEEESSCS-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-cHHHHHH-----HHHHHHCCCEEEEEe
Confidence 679999984 6777654 456777899887753
No 311
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=35.25 E-value=23 Score=33.44 Aligned_cols=30 Identities=37% Similarity=0.551 Sum_probs=22.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
|-++||||- +|||+.+ .+.|.++|++|.+.
T Consensus 5 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~ 34 (260)
T 1x1t_A 5 KVAVVTGST-SGIGLGI-----ATALAAQGADIVLN 34 (260)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHcCCEEEEE
Confidence 789999984 7777654 45677789988765
No 312
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=35.16 E-value=31 Score=33.27 Aligned_cols=32 Identities=19% Similarity=0.191 Sum_probs=29.9
Q ss_pred cCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 009814 11 VSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (524)
Q Consensus 11 ~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpy 42 (524)
-.|.||=.+|.++|..|..+|++|.++-+||-
T Consensus 14 kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~q 45 (228)
T 2r8r_A 14 APGVGKTYAMLQAAHAQLRQGVRVMAGVVETH 45 (228)
T ss_dssp STTSSHHHHHHHHHHHHHHTTCCEEEEECCCT
T ss_pred CCCCcHHHHHHHHHHHHHHCCCCEEEEEeCCC
Confidence 47999999999999999999999999999985
No 313
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=35.15 E-value=18 Score=35.16 Aligned_cols=30 Identities=43% Similarity=0.459 Sum_probs=23.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
|-++||||- ||||+. +.+.|-+.|.+|.+.
T Consensus 10 KvalVTGas-~GIG~a-----ia~~la~~Ga~Vvi~ 39 (255)
T 4g81_D 10 KTALVTGSA-RGLGFA-----YAEGLAAAGARVILN 39 (255)
T ss_dssp CEEEETTCS-SHHHHH-----HHHHHHHTTCEEEEC
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEE
Confidence 789999986 788876 457788899988764
No 314
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=35.06 E-value=21 Score=34.24 Aligned_cols=30 Identities=40% Similarity=0.629 Sum_probs=23.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
|-++||||- +|||+. +.+.|.++|++|.+.
T Consensus 29 k~vlVTGas-~gIG~a-----ia~~la~~G~~V~~~ 58 (266)
T 3uxy_A 29 KVALVTGAA-GGIGGA-----VVTALRAAGARVAVA 58 (266)
T ss_dssp CEEEESSTT-SHHHHH-----HHHHHHHTTCEEEEC
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEE
Confidence 679999985 677764 456677889999875
No 315
>3p32_A Probable GTPase RV1496/MT1543; structural genomics, seattle structural genomics center for infectious disease, ssgcid, MEAB, MMAA; HET: GDP PGE; 1.90A {Mycobacterium tuberculosis} PDB: 3md0_A* 4gt1_A* 3nxs_A* 3tk1_A*
Probab=34.92 E-value=45 Score=33.46 Aligned_cols=41 Identities=32% Similarity=0.515 Sum_probs=33.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpyln 44 (524)
..|.+||- .|.||=.++..++..|...|.+|.++-.||.-.
T Consensus 80 ~~I~i~G~--~G~GKSTl~~~L~~~l~~~g~kV~vi~~Dp~~~ 120 (355)
T 3p32_A 80 HRVGITGV--PGVGKSTAIEALGMHLIERGHRVAVLAVDPSST 120 (355)
T ss_dssp EEEEEECC--TTSSHHHHHHHHHHHHHTTTCCEEEEEEC----
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHHhCCCceEEEecCCCCC
Confidence 35777884 999999999999999999999999999998655
No 316
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=34.89 E-value=23 Score=33.37 Aligned_cols=31 Identities=39% Similarity=0.548 Sum_probs=23.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|-++||||- +|||+.+ .+.|.++|++|.+.-
T Consensus 6 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~ 36 (254)
T 1hdc_A 6 KTVIITGGA-RGLGAEA-----ARQAVAAGARVVLAD 36 (254)
T ss_dssp SEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-cHHHHHH-----HHHHHHCCCEEEEEe
Confidence 679999984 7777654 456777899987753
No 317
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=34.88 E-value=29 Score=32.87 Aligned_cols=31 Identities=19% Similarity=0.221 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|.++||||- +|||+.+ .+.|-++|++|.+.-
T Consensus 12 k~vlVTGas-~gIG~ai-----a~~l~~~G~~V~~~~ 42 (264)
T 3ucx_A 12 KVVVISGVG-PALGTTL-----ARRCAEQGADLVLAA 42 (264)
T ss_dssp CEEEEESCC-TTHHHHH-----HHHHHHTTCEEEEEE
T ss_pred cEEEEECCC-cHHHHHH-----HHHHHHCcCEEEEEe
Confidence 789999994 7888755 456777899887753
No 318
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=34.87 E-value=22 Score=34.12 Aligned_cols=30 Identities=27% Similarity=0.453 Sum_probs=22.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
|.++||||- +|||+.++ +.|-++|++|.+.
T Consensus 28 k~~lVTGas-~GIG~aia-----~~l~~~G~~V~~~ 57 (277)
T 4fc7_A 28 KVAFITGGG-SGIGFRIA-----EIFMRHGCHTVIA 57 (277)
T ss_dssp CEEEEETTT-SHHHHHHH-----HHHHTTTCEEEEE
T ss_pred CEEEEeCCC-chHHHHHH-----HHHHHCCCEEEEE
Confidence 789999994 77777554 5566789888765
No 319
>1e6c_A Shikimate kinase; phosphoryl transfer, ADP, shikimate pathway, P-loop protein, transferase; 1.8A {Erwinia chrysanthemi} SCOP: c.37.1.2 PDB: 1shk_A 2shk_A*
Probab=34.84 E-value=24 Score=30.67 Aligned_cols=25 Identities=16% Similarity=0.328 Sum_probs=19.4
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHH
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLL 27 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll 27 (524)
|+.|++|| .+|-||...|.-|...|
T Consensus 2 ~~~I~l~G--~~GsGKsT~a~~La~~l 26 (173)
T 1e6c_A 2 TEPIFMVG--ARGCGMTTVGRELARAL 26 (173)
T ss_dssp CCCEEEES--CTTSSHHHHHHHHHHHH
T ss_pred CceEEEEC--CCCCCHHHHHHHHHHHh
Confidence 57899999 58999987777666544
No 320
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=34.81 E-value=38 Score=32.32 Aligned_cols=31 Identities=29% Similarity=0.380 Sum_probs=23.7
Q ss_pred EEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 009814 4 VLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (524)
Q Consensus 4 i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~d 40 (524)
|+||||- |-+.+.|.+.|.++|++|..+-.+
T Consensus 3 vlVtGat------G~iG~~l~~~L~~~g~~V~~~~r~ 33 (312)
T 3ko8_A 3 IVVTGGA------GFIGSHLVDKLVELGYEVVVVDNL 33 (312)
T ss_dssp EEEETTT------SHHHHHHHHHHHHTTCEEEEECCC
T ss_pred EEEECCC------ChHHHHHHHHHHhCCCEEEEEeCC
Confidence 8999974 555667777888899999887443
No 321
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=34.75 E-value=24 Score=33.33 Aligned_cols=32 Identities=25% Similarity=0.395 Sum_probs=23.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
|.++||||- +|||+.+ .+.|.++|++|.+.-.
T Consensus 8 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r 39 (262)
T 1zem_A 8 KVCLVTGAG-GNIGLAT-----ALRLAEEGTAIALLDM 39 (262)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 789999984 7777754 4667778999877643
No 322
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=34.75 E-value=25 Score=32.96 Aligned_cols=32 Identities=41% Similarity=0.571 Sum_probs=24.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
|-++||||- +|||+. +.+.|-++|++|.+.-.
T Consensus 3 k~vlVTGas-~gIG~~-----ia~~l~~~G~~V~~~~r 34 (247)
T 3dii_A 3 RGVIVTGGG-HGIGKQ-----ICLDFLEAGDKVCFIDI 34 (247)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEeC
Confidence 789999986 677765 45667788999988643
No 323
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Probab=34.72 E-value=20 Score=35.51 Aligned_cols=30 Identities=33% Similarity=0.475 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
|.++||||- +|||+.+ .+.|..+|++|.+.
T Consensus 10 k~~lVTGas-~GIG~~~-----a~~La~~Ga~Vv~~ 39 (319)
T 1gz6_A 10 RVVLVTGAG-GGLGRAY-----ALAFAERGALVVVN 39 (319)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEE
Confidence 789999986 8888765 45677789988774
No 324
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=34.71 E-value=26 Score=32.72 Aligned_cols=31 Identities=19% Similarity=0.324 Sum_probs=22.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCe-eEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLR-VTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~-v~~~k 38 (524)
|-++|||| -+|||+.+ .+.|.++|++ |.+.-
T Consensus 6 k~vlVtGa-s~gIG~~~-----a~~l~~~G~~~v~~~~ 37 (254)
T 1sby_A 6 KNVIFVAA-LGGIGLDT-----SRELVKRNLKNFVILD 37 (254)
T ss_dssp CEEEEETT-TSHHHHHH-----HHHHHHTCCSEEEEEE
T ss_pred cEEEEECC-CChHHHHH-----HHHHHHCCCcEEEEEe
Confidence 67999998 47888754 4556778986 66653
No 325
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=34.69 E-value=29 Score=32.92 Aligned_cols=33 Identities=33% Similarity=0.466 Sum_probs=24.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~d 40 (524)
|-++||||- +|||+. +.+.|.++|++|.+.-.+
T Consensus 22 k~vlVTGas-~gIG~a-----ia~~l~~~G~~V~~~~r~ 54 (253)
T 2nm0_A 22 RSVLVTGGN-RGIGLA-----IARAFADAGDKVAITYRS 54 (253)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCC-CHHHHH-----HHHHHHHCCCEEEEEeCC
Confidence 679999984 777765 456677889999876443
No 326
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=34.65 E-value=20 Score=34.43 Aligned_cols=31 Identities=35% Similarity=0.595 Sum_probs=23.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|.|+||||- +|||+.++ +.|..+|++|.+.-
T Consensus 45 k~vlITGas-ggIG~~la-----~~L~~~G~~V~~~~ 75 (285)
T 2c07_A 45 KVALVTGAG-RGIGREIA-----KMLAKSVSHVICIS 75 (285)
T ss_dssp CEEEEESTT-SHHHHHHH-----HHHTTTSSEEEEEE
T ss_pred CEEEEECCC-cHHHHHHH-----HHHHHcCCEEEEEc
Confidence 679999986 78887654 56667899887743
No 327
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=34.61 E-value=22 Score=34.59 Aligned_cols=32 Identities=31% Similarity=0.539 Sum_probs=23.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
|.++|||| -+|||+.+ .+.|.++|++|.+.-.
T Consensus 27 k~vlVTGa-s~gIG~ai-----a~~L~~~G~~V~~~~r 58 (297)
T 1xhl_A 27 KSVIITGS-SNGIGRSA-----AVIFAKEGAQVTITGR 58 (297)
T ss_dssp CEEEETTC-SSHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCC-CcHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 67999998 47787765 4567778999887643
No 328
>3v9p_A DTMP kinase, thymidylate kinase; ssgcid, STRU genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia thailandensis}
Probab=34.45 E-value=33 Score=32.71 Aligned_cols=35 Identities=23% Similarity=0.358 Sum_probs=27.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHC----CCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKAC----GLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~----g~~v~~~k 38 (524)
+||++.| .+|-||+..+.-|...|+.+ |++|...+
T Consensus 26 ~~I~~eG--~~GsGKsT~~~~l~~~l~~~~~~~g~~v~~~r 64 (227)
T 3v9p_A 26 KFITFEG--IDGAGKTTHLQWFCDRLQERLGPAGRHVVVTR 64 (227)
T ss_dssp CEEEEEC--CC---CHHHHHHHHHHHHHHHGGGTCCEEEEE
T ss_pred eEEEEEC--CCCCCHHHHHHHHHHHHHhhccccceeeeeec
Confidence 6889998 58999999999999999998 99986543
No 329
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=34.41 E-value=22 Score=33.84 Aligned_cols=29 Identities=34% Similarity=0.678 Sum_probs=22.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~ 36 (524)
|.++||||- +|||+.+ .+.|-.+|++|.+
T Consensus 26 k~vlITGas-~gIG~~~-----a~~l~~~G~~v~~ 54 (269)
T 3gk3_A 26 RVAFVTGGM-GGLGAAI-----SRRLHDAGMAVAV 54 (269)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHTTTCEEEE
T ss_pred CEEEEECCC-chHHHHH-----HHHHHHCCCEEEE
Confidence 789999986 8888755 4567778998865
No 330
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=34.35 E-value=22 Score=34.96 Aligned_cols=31 Identities=32% Similarity=0.521 Sum_probs=23.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|.++||||- ||||+.+ .+.|-++|++|.+.=
T Consensus 28 k~vlVTGas-~GIG~ai-----a~~la~~G~~Vv~~~ 58 (322)
T 3qlj_A 28 RVVIVTGAG-GGIGRAH-----ALAFAAEGARVVVND 58 (322)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEEC
T ss_pred CEEEEECCC-cHHHHHH-----HHHHHHCCCEEEEEe
Confidence 789999986 7888754 456667899887753
No 331
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=34.30 E-value=40 Score=30.55 Aligned_cols=35 Identities=23% Similarity=0.339 Sum_probs=27.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dp 41 (524)
||-|+||||- |-+.+.+.+.|.++|++|..+--+|
T Consensus 4 m~~ilItGat------G~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 4 VKKIVLIGAS------GFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CCEEEEETCC------HHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CCEEEEEcCC------chHHHHHHHHHHHCCCEEEEEEcCc
Confidence 4569999975 7777788888889999998875543
No 332
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=34.03 E-value=19 Score=34.52 Aligned_cols=30 Identities=33% Similarity=0.511 Sum_probs=22.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
|-++||||- +|||+. +.+.|-++|++|.+.
T Consensus 27 k~~lVTGas-~gIG~a-----ia~~la~~G~~V~~~ 56 (271)
T 4ibo_A 27 RTALVTGSS-RGLGRA-----MAEGLAVAGARILIN 56 (271)
T ss_dssp CEEEETTCS-SHHHHH-----HHHHHHHTTCEEEEC
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEE
Confidence 789999985 777765 456677889988774
No 333
>1e8c_A UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase; peptidoglycan biosynthesis; HET: KCX UAG API; 2.00A {Escherichia coli} SCOP: c.98.1.1 c.59.1.1 c.72.2.1
Probab=34.00 E-value=43 Score=35.34 Aligned_cols=33 Identities=24% Similarity=0.206 Sum_probs=28.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|.|-||| +=||+.|++=|..+|++.|++|..+.
T Consensus 109 ~vI~VTG----TnGKTTT~~ml~~iL~~~g~~~~~~g 141 (498)
T 1e8c_A 109 RLVGVTG----TNGKTTTTQLLAQWSQLLGEISAVMG 141 (498)
T ss_dssp EEEEEES----SSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred eEEEEeC----CcChHHHHHHHHHHHHhCCCCEEEEC
Confidence 5788888 56999999999999999999987653
No 334
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=33.90 E-value=25 Score=34.14 Aligned_cols=31 Identities=26% Similarity=0.392 Sum_probs=23.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|.++||||- +|||+.++ +.|.++|++|.+.-
T Consensus 35 k~vlVTGas-~gIG~aia-----~~L~~~G~~V~~~~ 65 (291)
T 3cxt_A 35 KIALVTGAS-YGIGFAIA-----SAYAKAGATIVFND 65 (291)
T ss_dssp CEEEEETCS-SHHHHHHH-----HHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-cHHHHHHH-----HHHHHCCCEEEEEe
Confidence 679999984 77777554 55667899887753
No 335
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=33.74 E-value=25 Score=34.08 Aligned_cols=30 Identities=33% Similarity=0.512 Sum_probs=22.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
|.++||||- +|||+.+ .+.|-++|++|.+.
T Consensus 50 k~vlVTGas-~GIG~ai-----a~~la~~G~~V~~~ 79 (294)
T 3r3s_A 50 RKALVTGGD-SGIGRAA-----AIAYAREGADVAIN 79 (294)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEE
Confidence 789999994 7777654 46677889988764
No 336
>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*
Probab=33.74 E-value=28 Score=33.97 Aligned_cols=33 Identities=24% Similarity=0.303 Sum_probs=26.1
Q ss_pred EEEEEeCCc-cCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 2 KYVLVTGGV-VSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 2 k~i~vtggv-~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
|.++||||- -||||+.++ +.|-.+|++|.+.=.
T Consensus 10 k~~lVTGa~~s~GIG~aia-----~~la~~G~~Vv~~~r 43 (315)
T 2o2s_A 10 QTAFVAGVADSHGYGWAIA-----KHLASAGARVALGTW 43 (315)
T ss_dssp CEEEEECCSSSSSHHHHHH-----HHHHTTTCEEEEEEC
T ss_pred CEEEEeCCCCCCChHHHHH-----HHHHHCCCEEEEEec
Confidence 789999995 899998654 567778999987643
No 337
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=33.61 E-value=24 Score=33.11 Aligned_cols=30 Identities=33% Similarity=0.529 Sum_probs=22.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
|.|+||||- +|||+-++ +.|..+|++|.+.
T Consensus 22 k~vlItGas-ggiG~~la-----~~l~~~G~~v~~~ 51 (274)
T 1ja9_A 22 KVALTTGAG-RGIGRGIA-----IELGRRGASVVVN 51 (274)
T ss_dssp CEEEETTTT-SHHHHHHH-----HHHHHTTCEEEEE
T ss_pred CEEEEeCCC-chHHHHHH-----HHHHHCCCEEEEE
Confidence 679999984 67776554 5677789887754
No 338
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=33.49 E-value=24 Score=32.62 Aligned_cols=32 Identities=28% Similarity=0.440 Sum_probs=23.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
|.|+||||- +|||+ ++.+.|.++|++|.+.=.
T Consensus 7 k~vlVtGas-ggiG~-----~~a~~l~~~G~~V~~~~r 38 (251)
T 1zk4_A 7 KVAIITGGT-LGIGL-----AIATKFVEEGAKVMITGR 38 (251)
T ss_dssp CEEEETTTT-SHHHH-----HHHHHHHHTTCEEEEEES
T ss_pred cEEEEeCCC-ChHHH-----HHHHHHHHCCCEEEEEeC
Confidence 679999983 66665 455667778998887643
No 339
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=33.39 E-value=25 Score=32.87 Aligned_cols=30 Identities=30% Similarity=0.504 Sum_probs=22.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
|.|+||||- +|||+. +.+.|.++|++|.+.
T Consensus 8 k~vlITGas-ggiG~~-----~a~~l~~~G~~V~~~ 37 (261)
T 1gee_A 8 KVVVITGSS-TGLGKS-----MAIRFATEKAKVVVN 37 (261)
T ss_dssp CEEEETTCS-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-ChHHHH-----HHHHHHHCCCEEEEE
Confidence 689999985 777765 445666779887764
No 340
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=33.39 E-value=24 Score=33.10 Aligned_cols=33 Identities=30% Similarity=0.460 Sum_probs=23.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~d 40 (524)
|-|+|||| -+|||+.+ .+.|.++|++|.+.-.+
T Consensus 15 k~vlITGa-sggiG~~l-----a~~l~~~G~~V~~~~r~ 47 (266)
T 1xq1_A 15 KTVLVTGG-TKGIGHAI-----VEEFAGFGAVIHTCARN 47 (266)
T ss_dssp CEEEETTT-TSHHHHHH-----HHHHHHTTCEEEEEESC
T ss_pred CEEEEECC-CCHHHHHH-----HHHHHHCCCEEEEEeCC
Confidence 67999998 46777654 45566789988776443
No 341
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=33.37 E-value=24 Score=33.88 Aligned_cols=30 Identities=37% Similarity=0.525 Sum_probs=22.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
|.++||||- +|||+.+ .+.|.++|++|.+.
T Consensus 30 k~vlVTGas-~gIG~ai-----a~~L~~~G~~V~~~ 59 (276)
T 2b4q_A 30 RIALVTGGS-RGIGQMI-----AQGLLEAGARVFIC 59 (276)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-ChHHHHH-----HHHHHHCCCEEEEE
Confidence 789999984 7777754 45667789988765
No 342
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=33.34 E-value=27 Score=32.71 Aligned_cols=32 Identities=31% Similarity=0.529 Sum_probs=24.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
|.++||||- +|||+. +.+.|-++|++|.+.=.
T Consensus 10 k~vlITGas-~gIG~~-----~a~~l~~~G~~V~~~~r 41 (261)
T 3n74_A 10 KVALITGAG-SGFGEG-----MAKRFAKGGAKVVIVDR 41 (261)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-chHHHH-----HHHHHHHCCCEEEEEcC
Confidence 789999996 777764 45667788999887643
No 343
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=33.32 E-value=23 Score=33.94 Aligned_cols=29 Identities=31% Similarity=0.536 Sum_probs=21.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~ 36 (524)
|.++||||- ||||+.+ .+.|-++|++|.+
T Consensus 28 k~~lVTGas-~GIG~ai-----a~~la~~G~~Vv~ 56 (267)
T 3u5t_A 28 KVAIVTGAS-RGIGAAI-----AARLASDGFTVVI 56 (267)
T ss_dssp CEEEEESCS-SHHHHHH-----HHHHHHHTCEEEE
T ss_pred CEEEEeCCC-CHHHHHH-----HHHHHHCCCEEEE
Confidence 779999984 7777654 4556677988865
No 344
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=33.24 E-value=26 Score=33.63 Aligned_cols=31 Identities=32% Similarity=0.493 Sum_probs=23.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|.|+||||- +|||+.+ .+.|..+|++|.+.=
T Consensus 19 k~vlVTGas-ggIG~~l-----a~~l~~~G~~V~~~~ 49 (303)
T 1yxm_A 19 QVAIVTGGA-TGIGKAI-----VKELLELGSNVVIAS 49 (303)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-cHHHHHH-----HHHHHHCCCEEEEEe
Confidence 679999984 7777654 456677899887653
No 345
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=33.14 E-value=35 Score=32.97 Aligned_cols=31 Identities=26% Similarity=0.500 Sum_probs=21.9
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
||-|+||||- |-+.+.|.+.|.++|++|..+
T Consensus 1 M~~vlVTGat------G~iG~~l~~~L~~~g~~V~~~ 31 (347)
T 1orr_A 1 MAKLLITGGC------GFLGSNLASFALSQGIDLIVF 31 (347)
T ss_dssp -CEEEEETTT------SHHHHHHHHHHHHTTCEEEEE
T ss_pred CcEEEEeCCC------chhHHHHHHHHHhCCCEEEEE
Confidence 6779999973 344456666677789988775
No 346
>2pez_A Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthetase 1 (PAPS synthetase...; NMP-kinase fold, protein in complex with nucleic acid; HET: GGZ DAT; 1.40A {Homo sapiens} PDB: 2pey_A* 2ax4_A*
Probab=33.10 E-value=56 Score=28.66 Aligned_cols=33 Identities=27% Similarity=0.298 Sum_probs=26.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~ 36 (524)
++|.+||. +|-||=..+..|...|+..|+.+..
T Consensus 6 ~~i~l~G~--~GsGKST~~~~L~~~l~~~g~~~i~ 38 (179)
T 2pez_A 6 CTVWLTGL--SGAGKTTVSMALEEYLVCHGIPCYT 38 (179)
T ss_dssp EEEEEECC--TTSSHHHHHHHHHHHHHHTTCCEEE
T ss_pred cEEEEECC--CCCCHHHHHHHHHHHHhhCCCcEEE
Confidence 57899996 8889988888888888777876543
No 347
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=33.08 E-value=25 Score=34.61 Aligned_cols=31 Identities=29% Similarity=0.462 Sum_probs=23.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|.++||||- +|||+. +.+.|-++|++|.++-
T Consensus 47 k~~lVTGas-~GIG~a-----ia~~la~~G~~Vv~~~ 77 (317)
T 3oec_A 47 KVAFITGAA-RGQGRT-----HAVRLAQDGADIVAID 77 (317)
T ss_dssp CEEEESSCS-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCeEEEEe
Confidence 689999985 777765 4556778899988763
No 348
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=32.99 E-value=23 Score=33.34 Aligned_cols=30 Identities=47% Similarity=0.567 Sum_probs=22.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
|-++||||- +|||+.+ .+.|.++|++|.+.
T Consensus 7 k~vlVTGas-~giG~~i-----a~~l~~~G~~V~~~ 36 (253)
T 1hxh_A 7 KVALVTGGA-SGVGLEV-----VKLLLGEGAKVAFS 36 (253)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEE
Confidence 679999984 6777654 45677789998775
No 349
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=32.96 E-value=1.5e+02 Score=28.77 Aligned_cols=82 Identities=13% Similarity=0.007 Sum_probs=49.4
Q ss_pred CeEEEEEeccCCCcchHHHHHHHHHHcCCceeEEeeeEEeeCCCccccccCCChhhhhHHHHhccCCCEEEECCCCCCCc
Q 009814 297 PVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRG 376 (524)
Q Consensus 297 ~v~IaiVGkY~~~~day~SI~~aL~~ag~~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~l~~~DGIllpGGfG~rg 376 (524)
+.++.+|+.-. ..+.-..+.++|+..|+++.+. +.+++-. ++ +.|.++|.||++.-....-
T Consensus 4 m~~vLiV~g~~-~~~~a~~l~~aL~~~g~~V~~i------~~~~~~~-----~~-------~~L~~yDvIIl~d~~~~~l 64 (259)
T 3rht_A 4 MTRVLYCGDTS-LETAAGYLAGLMTSWQWEFDYI------PSHVGLD-----VG-------ELLAKQDLVILSDYPAERM 64 (259)
T ss_dssp --CEEEEESSC-TTTTHHHHHHHHHHTTCCCEEE------CTTSCBC-----SS-------HHHHTCSEEEEESCCGGGB
T ss_pred CceEEEECCCC-chhHHHHHHHHHHhCCceEEEe------ccccccc-----Ch-------hHHhcCCEEEEcCCccccC
Confidence 35677886221 2334567788999999888764 5554411 11 5688999999986322222
Q ss_pred hhHHHHHHHHHHHcCCCEEEE
Q 009814 377 VQGKILAAKYAREHRIPYLGI 397 (524)
Q Consensus 377 ~eg~i~air~are~~iP~LGI 397 (524)
.+..+++++...+++-=++.+
T Consensus 65 ~~~~~~~L~~yV~~GGgLi~~ 85 (259)
T 3rht_A 65 TAQAIDQLVTMVKAGCGLVML 85 (259)
T ss_dssp CHHHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHHHHHhCCeEEEe
Confidence 245567777666666555544
No 350
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=32.95 E-value=1.3e+02 Score=27.85 Aligned_cols=33 Identities=21% Similarity=0.138 Sum_probs=22.4
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 009814 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (524)
Q Consensus 361 ~~~DGIllpGGfG~rg~eg~i~air~are~~iP~LGI 397 (524)
.++||||+.+... ... ...++.+.+.++|+.-+
T Consensus 63 ~~vdgiI~~~~~~-~~~---~~~~~~~~~~~iPvV~~ 95 (293)
T 3l6u_A 63 LKVDAIFITTLDD-VYI---GSAIEEAKKAGIPVFAI 95 (293)
T ss_dssp TTCSEEEEECSCT-TTT---HHHHHHHHHTTCCEEEE
T ss_pred cCCCEEEEecCCh-HHH---HHHHHHHHHcCCCEEEe
Confidence 5799999876322 122 24567777889998766
No 351
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=32.94 E-value=29 Score=32.87 Aligned_cols=31 Identities=29% Similarity=0.327 Sum_probs=23.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|.|+|||| -+|||+.++ +.|.++|++|.+.-
T Consensus 35 k~vlITGa-sggIG~~la-----~~L~~~G~~V~~~~ 65 (279)
T 3ctm_A 35 KVASVTGS-SGGIGWAVA-----EAYAQAGADVAIWY 65 (279)
T ss_dssp CEEEETTT-TSSHHHHHH-----HHHHHHTCEEEEEE
T ss_pred CEEEEECC-CcHHHHHHH-----HHHHHCCCEEEEEe
Confidence 67999998 478887654 45666799887753
No 352
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=32.92 E-value=26 Score=32.81 Aligned_cols=34 Identities=26% Similarity=0.280 Sum_probs=24.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCC---CeeEEeeec
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACG---LRVTCIKID 40 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g---~~v~~~k~d 40 (524)
+|.|+||||- +|||+.+ .+.|.++| ++|.+.-.+
T Consensus 21 ~k~vlITGas-ggIG~~l-----a~~L~~~G~~~~~V~~~~r~ 57 (267)
T 1sny_A 21 MNSILITGCN-RGLGLGL-----VKALLNLPQPPQHLFTTCRN 57 (267)
T ss_dssp CSEEEESCCS-SHHHHHH-----HHHHHTSSSCCSEEEEEESC
T ss_pred CCEEEEECCC-CcHHHHH-----HHHHHhcCCCCcEEEEEecC
Confidence 4789999994 7777654 45666778 888776443
No 353
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=32.86 E-value=26 Score=33.15 Aligned_cols=31 Identities=42% Similarity=0.686 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|-++||||- +|||+. +.+.|-++|++|.+.-
T Consensus 7 k~vlVTGas-~gIG~a-----ia~~l~~~G~~V~~~~ 37 (257)
T 3imf_A 7 KVVIITGGS-SGMGKG-----MATRFAKEGARVVITG 37 (257)
T ss_dssp CEEEETTTT-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEe
Confidence 789999985 677765 4566778899987753
No 354
>3ld9_A DTMP kinase, thymidylate kinase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 2.15A {Ehrlichia chaffeensis}
Probab=32.79 E-value=46 Score=31.67 Aligned_cols=33 Identities=18% Similarity=0.321 Sum_probs=30.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHH-CCCeeEE
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKA-CGLRVTC 36 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~-~g~~v~~ 36 (524)
++|+++|. +|-||...+..|...|.. +|++|..
T Consensus 22 ~~i~~~G~--~g~GKst~~~~l~~~l~~~~g~~v~~ 55 (223)
T 3ld9_A 22 MFITFEGI--DGSGKTTQSHLLAEYLSEIYGVNNVV 55 (223)
T ss_dssp EEEEEECS--TTSSHHHHHHHHHHHHHHHHCGGGEE
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHhhccCceeeE
Confidence 68999985 899999999999999999 9998876
No 355
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=32.69 E-value=23 Score=32.82 Aligned_cols=31 Identities=26% Similarity=0.537 Sum_probs=22.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|-|+||||- +|||+.+ .+.|.++|++|.+.-
T Consensus 12 ~~vlVtGas-ggiG~~l-----a~~l~~~G~~V~~~~ 42 (255)
T 1fmc_A 12 KCAIITGAG-AGIGKEI-----AITFATAGASVVVSD 42 (255)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHTTTCEEEEEE
T ss_pred CEEEEECCc-cHHHHHH-----HHHHHHCCCEEEEEc
Confidence 679999984 7777654 455667899887753
No 356
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=32.63 E-value=1.2e+02 Score=28.43 Aligned_cols=33 Identities=15% Similarity=0.132 Sum_probs=22.4
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 009814 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (524)
Q Consensus 361 ~~~DGIllpGGfG~rg~eg~i~air~are~~iP~LGI 397 (524)
.++|||++.+... ... ...++.+.+.++|+.-+
T Consensus 60 ~~vdgiii~~~~~-~~~---~~~~~~~~~~giPvV~~ 92 (297)
T 3rot_A 60 TYPSGIATTIPSD-TAF---SKSLQRANKLNIPVIAV 92 (297)
T ss_dssp TCCSEEEECCCCS-STT---HHHHHHHHHHTCCEEEE
T ss_pred cCCCEEEEeCCCH-HHH---HHHHHHHHHCCCCEEEE
Confidence 5799999976322 222 34567788889999755
No 357
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=32.61 E-value=25 Score=33.43 Aligned_cols=32 Identities=28% Similarity=0.459 Sum_probs=24.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
|-++||||- ||||+.+ .+.|-++|++|.+.-.
T Consensus 21 k~vlVTGas-~gIG~ai-----a~~l~~~G~~V~~~~r 52 (266)
T 4egf_A 21 KRALITGAT-KGIGADI-----ARAFAAAGARLVLSGR 52 (266)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 679999995 7777654 4667788998877644
No 358
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=32.61 E-value=28 Score=32.76 Aligned_cols=31 Identities=29% Similarity=0.559 Sum_probs=22.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|.|+||||- +|||+- +.+.|.++|++|.+.-
T Consensus 17 k~vlITGas-ggiG~~-----~a~~l~~~G~~V~~~~ 47 (278)
T 2bgk_A 17 KVAIITGGA-GGIGET-----TAKLFVRYGAKVVIAD 47 (278)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-CHHHHH-----HHHHHHHCCCEEEEEc
Confidence 679999984 777765 4456667899888753
No 359
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=32.60 E-value=26 Score=33.49 Aligned_cols=31 Identities=29% Similarity=0.421 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|-++||||- +|||+.+ .+.|-++|++|.+.-
T Consensus 28 k~vlVTGas-~gIG~ai-----a~~la~~G~~V~~~~ 58 (266)
T 3grp_A 28 RKALVTGAT-GGIGEAI-----ARCFHAQGAIVGLHG 58 (266)
T ss_dssp CEEEESSTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEEe
Confidence 789999985 7777654 566778899887653
No 360
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=32.55 E-value=36 Score=32.50 Aligned_cols=34 Identities=18% Similarity=0.330 Sum_probs=25.6
Q ss_pred EEEEEeCCcc-CCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 009814 2 KYVLVTGGVV-SGLGKGVTASSIGVLLKACGLRVTCIKID 40 (524)
Q Consensus 2 k~i~vtggv~-s~lgkgi~~~s~g~ll~~~g~~v~~~k~d 40 (524)
|.++||||-- ||||+.+ .+.|-.+|++|.+.=.+
T Consensus 27 k~vlVTGasg~~GIG~~i-----a~~l~~~G~~V~~~~r~ 61 (280)
T 3nrc_A 27 KKILITGLLSNKSIAYGI-----AKAMHREGAELAFTYVG 61 (280)
T ss_dssp CEEEECCCCSTTCHHHHH-----HHHHHHTTCEEEEEECT
T ss_pred CEEEEECCCCCCCHHHHH-----HHHHHHcCCEEEEeeCc
Confidence 7899999854 7898765 45667789998876443
No 361
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=32.55 E-value=28 Score=33.16 Aligned_cols=31 Identities=32% Similarity=0.525 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|-++||||- +|||+.+ .+.|.++|++|.+.-
T Consensus 7 k~vlITGas-~gIG~ai-----a~~l~~~G~~V~~~~ 37 (263)
T 2a4k_A 7 KTILVTGAA-SGIGRAA-----LDLFAREGASLVAVD 37 (263)
T ss_dssp CEEEEESTT-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEEe
Confidence 689999984 7777764 456677899988753
No 362
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=32.53 E-value=28 Score=33.31 Aligned_cols=30 Identities=33% Similarity=0.472 Sum_probs=22.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
|-++||||- +|||+.+ .+.|.++|++|.+.
T Consensus 30 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~ 59 (283)
T 1g0o_A 30 KVALVTGAG-RGIGREM-----AMELGRRGCKVIVN 59 (283)
T ss_dssp CEEEETTTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHHH-----HHHHHHCCCEEEEE
Confidence 679999984 7777755 45667789988764
No 363
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=32.46 E-value=25 Score=34.89 Aligned_cols=31 Identities=32% Similarity=0.353 Sum_probs=23.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|.++||||- +|||+.+ .+.|.++|++|.+.=
T Consensus 47 k~~lVTGas-~GIG~ai-----a~~La~~G~~Vv~~~ 77 (328)
T 2qhx_A 47 PVALVTGAA-KRLGRSI-----AEGLHAEGYAVCLHY 77 (328)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCEEEEEc
Confidence 689999996 7777754 466778899988763
No 364
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=32.22 E-value=35 Score=32.43 Aligned_cols=32 Identities=16% Similarity=0.117 Sum_probs=24.5
Q ss_pred EEEEEeCCcc-CCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVV-SGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~-s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|-++||||-- +|||+.+ .+.|..+|++|.+.-
T Consensus 7 k~vlVTGas~~~gIG~~~-----a~~l~~~G~~V~~~~ 39 (275)
T 2pd4_A 7 KKGLIVGVANNKSIAYGI-----AQSCFNQGATLAFTY 39 (275)
T ss_dssp CEEEEECCCSTTSHHHHH-----HHHHHTTTCEEEEEE
T ss_pred CEEEEECCCCCCcHHHHH-----HHHHHHCCCEEEEEe
Confidence 7899999963 8999865 456667899887753
No 365
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=32.21 E-value=1.4e+02 Score=28.27 Aligned_cols=33 Identities=21% Similarity=0.216 Sum_probs=22.4
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 009814 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (524)
Q Consensus 361 ~~~DGIllpGGfG~rg~eg~i~air~are~~iP~LGI 397 (524)
.++|||++.+...+ .. ...++.+.+.++|+.-+
T Consensus 57 ~~vdgiIi~~~~~~-~~---~~~~~~~~~~~iPvV~~ 89 (313)
T 3m9w_A 57 RGVDVLVIIPYNGQ-VL---SNVVKEAKQEGIKVLAY 89 (313)
T ss_dssp TTCSEEEEECSSTT-SC---HHHHHHHHTTTCEEEEE
T ss_pred cCCCEEEEeCCChh-hh---HHHHHHHHHCCCeEEEE
Confidence 57999998874322 21 24667778889998654
No 366
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=32.14 E-value=29 Score=34.42 Aligned_cols=30 Identities=37% Similarity=0.534 Sum_probs=22.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
|.++||||- ||||+. +.+.|-++|++|...
T Consensus 6 k~vlVTGas-~GIG~a-----ia~~L~~~G~~V~~~ 35 (324)
T 3u9l_A 6 KIILITGAS-SGFGRL-----TAEALAGAGHRVYAS 35 (324)
T ss_dssp CEEEESSCS-SHHHHH-----HHHHHHHTTCEEEEE
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEe
Confidence 689999985 777764 556677889988654
No 367
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=31.73 E-value=29 Score=34.08 Aligned_cols=31 Identities=32% Similarity=0.416 Sum_probs=24.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|-++|||| -||||+.+ .+.|-+.|.+|.+.=
T Consensus 30 KvalVTGa-s~GIG~ai-----A~~la~~Ga~V~i~~ 60 (273)
T 4fgs_A 30 KIAVITGA-TSGIGLAA-----AKRFVAEGARVFITG 60 (273)
T ss_dssp CEEEEESC-SSHHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEeCc-CCHHHHHH-----HHHHHHCCCEEEEEE
Confidence 67999998 58888764 567888999987753
No 368
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=31.55 E-value=93 Score=30.04 Aligned_cols=66 Identities=15% Similarity=0.174 Sum_probs=42.0
Q ss_pred CCeEEEEEeccCCCc---chHHHHHHHHHHcCCceeEEeeeEEeeCCCccccccCCChhhhhHHHHhc--cCCCEEEECC
Q 009814 296 EPVRIAMVGKYTGLS---DAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLL--KGADGILVPG 370 (524)
Q Consensus 296 ~~v~IaiVGkY~~~~---day~SI~~aL~~ag~~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~l--~~~DGIllpG 370 (524)
+.++||++ .+.+++ +++..+.++|+..|+..+..+++.+.++.. ++++..+..+.+ .++|.|+..+
T Consensus 7 ~~~~igi~-q~~~hp~ld~~~~G~~~~L~~~G~~~g~nv~~~~~~a~g--------d~~~~~~~~~~l~~~~~DlIiai~ 77 (302)
T 3lkv_A 7 KTAKVAVS-QIVEHPALDATRQGLLDGLKAKGYEEGKNLEFDYKTAQG--------NPAIAVQIARQFVGENPDVLVGIA 77 (302)
T ss_dssp CCEEEEEE-ESCCCHHHHHHHHHHHHHHHHTTCCBTTTEEEEEEECTT--------CHHHHHHHHHHHHTTCCSEEEEES
T ss_pred CCceEEEE-EeecChhHHHHHHHHHHHHHhhCcccCCcEEEEEEeCCC--------CHHHHHHHHHHHHhcCCcEEEEcC
Confidence 56899999 688754 345667899999998776555666655542 232332222332 5799887543
No 369
>2v54_A DTMP kinase, thymidylate kinase; nucleotide biosynthesis, ATP-binding, nucleotide-binding, poxvirus, transferase; HET: TYD POP; 2.4A {Vaccinia virus copenhagen} PDB: 2w0s_A*
Probab=31.50 E-value=27 Score=31.16 Aligned_cols=31 Identities=13% Similarity=0.098 Sum_probs=22.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEE
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTC 36 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~ 36 (524)
++|+++|+ +|-||...+.-|...| .|++|..
T Consensus 5 ~~I~l~G~--~GsGKsT~~~~L~~~l--~g~~~~~ 35 (204)
T 2v54_A 5 ALIVFEGL--DKSGKTTQCMNIMESI--PANTIKY 35 (204)
T ss_dssp CEEEEECC--TTSSHHHHHHHHHHTS--CGGGEEE
T ss_pred cEEEEEcC--CCCCHHHHHHHHHHHH--CCCceEE
Confidence 68999997 7889987777666544 2666543
No 370
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=31.42 E-value=32 Score=32.69 Aligned_cols=61 Identities=23% Similarity=0.251 Sum_probs=37.3
Q ss_pred cCCCEEEECCCCCCC-chhHHHHHHH-HHHHcCCCEEEEhHhHHHHHHHh----c-cccccccCCCCcc
Q 009814 361 KGADGILVPGGFGNR-GVQGKILAAK-YAREHRIPYLGICLGMQVAVIEF----A-RSVLNLRDANSTE 422 (524)
Q Consensus 361 ~~~DGIllpGGfG~r-g~eg~i~air-~are~~iP~LGICLGmQll~ie~----g-r~v~gl~~a~S~E 422 (524)
.+.|+|.++-|||.- |+.=-+..+| .|...++|+.||+- ++.++... + ..++-+-||...|
T Consensus 55 ~dld~Iav~~GPGsfTglRig~~~AkgLa~~~~iPl~gVst-L~a~a~~~~~~~~~~~v~~~~DARr~e 122 (213)
T 3r6m_A 55 QDLDALAFGRGPGSFTGVRIGIGIAQGLAFGAELPMIGVST-LAAMAQASYRLHGATDVAVAIDARMSE 122 (213)
T ss_dssp TTCSEEEEEEESSCHHHHHHHHHHHHHHHHHTTCCEEEEEH-HHHHHHHHHHHHCCSEEEEEECCSTTC
T ss_pred HHccEEEEecCCCchhhHHHHHHHHHHHHHHhCCCEEEEcC-HHHHHHhhhhcCCCcEEEEEEECCCCC
Confidence 467999999999984 5542223333 35567899999984 33333221 1 2455566666555
No 371
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=31.38 E-value=1.6e+02 Score=27.85 Aligned_cols=33 Identities=21% Similarity=0.150 Sum_probs=22.5
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 009814 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (524)
Q Consensus 361 ~~~DGIllpGGfG~rg~eg~i~air~are~~iP~LGI 397 (524)
.++|||++.+-.. ......++.+.+.++|+.-+
T Consensus 58 ~~vdgiIi~~~~~----~~~~~~~~~~~~~giPvV~~ 90 (330)
T 3uug_A 58 KGVKVLVIASIDG----TTLSDVLKQAGEQGIKVIAY 90 (330)
T ss_dssp HTCSEEEECCSSG----GGGHHHHHHHHHTTCEEEEE
T ss_pred cCCCEEEEEcCCc----hhHHHHHHHHHHCCCCEEEE
Confidence 5799999976321 12234677788889998755
No 372
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=31.34 E-value=39 Score=32.31 Aligned_cols=32 Identities=19% Similarity=0.262 Sum_probs=24.3
Q ss_pred EEEEEeCCcc-CCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVV-SGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~-s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|-++||||-- +|||+.++ +.|.++|++|.+.-
T Consensus 22 k~vlVTGas~~~gIG~~ia-----~~l~~~G~~V~~~~ 54 (285)
T 2p91_A 22 KRALITGVANERSIAYGIA-----KSFHREGAQLAFTY 54 (285)
T ss_dssp CEEEECCCSSTTSHHHHHH-----HHHHHTTCEEEEEE
T ss_pred CEEEEECCCCCCcHHHHHH-----HHHHHcCCEEEEEe
Confidence 6799999964 79998654 55667899887753
No 373
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=31.32 E-value=29 Score=33.35 Aligned_cols=30 Identities=33% Similarity=0.616 Sum_probs=22.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
|.++||||- ||||+.+ .+.|-++|++|.+.
T Consensus 30 k~~lVTGas-~GIG~ai-----a~~la~~G~~V~~~ 59 (280)
T 4da9_A 30 PVAIVTGGR-RGIGLGI-----ARALAASGFDIAIT 59 (280)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEecCC-CHHHHHH-----HHHHHHCCCeEEEE
Confidence 679999984 6777654 45666789887664
No 374
>1jlj_A Gephyrin; globular alpha/beta fold, structural protein; 1.60A {Homo sapiens} SCOP: c.57.1.1 PDB: 1ihc_A
Probab=31.12 E-value=64 Score=29.82 Aligned_cols=66 Identities=23% Similarity=0.403 Sum_probs=42.9
Q ss_pred cchHhhHHHHhhhhcCCCCCCee---EEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCcc-ccccCcchHHHHHH
Q 009814 89 TTGKIYQSVIDKERKGDYLGKTV---QVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGT-IGDIESMPFIEALG 164 (524)
Q Consensus 89 t~g~iy~~vi~ker~g~ylg~tv---qviphit~ei~~~i~~~~~~~~d~~~~~~d~~i~eiggt-vgdies~pf~ea~r 164 (524)
|+|....+.+++. .++|-.| .+||.=-++|++.|+++.. ..++|++|+ .||| +|+--=.| ||++
T Consensus 34 ~n~~~L~~~L~~~---~~~G~~v~~~~iv~Dd~~~I~~al~~a~~------~~~~DlVIt-tGGtg~g~~D~t~--eal~ 101 (189)
T 1jlj_A 34 RSGINLKDLVQDP---SLLGGTISAYKIVPDEIEEIKETLIDWCD------EKELNLILT-TGGTGFAPRDVTP--EATK 101 (189)
T ss_dssp HHHHHHHHHHHCT---TTTCCEEEEEEEECSCHHHHHHHHHHHHH------TSCCSEEEE-ESCCSSSTTCCHH--HHHH
T ss_pred hHHHHHHHHHhch---hcCCcEEEEEEEeCCCHHHHHHHHHHHhh------cCCCCEEEE-cCCCCCCCcccHH--HHHH
Confidence 3555555555431 2345444 5677777889999998862 236898866 7887 66544455 8888
Q ss_pred Hh
Q 009814 165 QF 166 (524)
Q Consensus 165 q~ 166 (524)
++
T Consensus 102 ~~ 103 (189)
T 1jlj_A 102 EV 103 (189)
T ss_dssp HH
T ss_pred HH
Confidence 76
No 375
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=31.09 E-value=41 Score=31.75 Aligned_cols=32 Identities=22% Similarity=0.296 Sum_probs=24.4
Q ss_pred EEEEEeCCcc-CCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVV-SGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~-s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|-++||||-- +|||+.+ .+.|.++|++|.+.-
T Consensus 10 k~vlVTGas~~~gIG~~i-----a~~l~~~G~~V~~~~ 42 (265)
T 1qsg_A 10 KRILVTGVASKLSIAYGI-----AQAMHREGAELAFTY 42 (265)
T ss_dssp CEEEECCCCSTTSHHHHH-----HHHHHHTTCEEEEEE
T ss_pred CEEEEECCCCCCCHHHHH-----HHHHHHCCCEEEEEc
Confidence 6799999964 7898765 456777899887753
No 376
>1uj2_A Uridine-cytidine kinase 2; alpha/beta mononucleotide-binding HOLD, transferase; HET: C5P ADP; 1.80A {Homo sapiens} SCOP: c.37.1.6 PDB: 1uei_A* 1uej_A* 1udw_A 1ufq_A* 1xrj_A*
Probab=31.06 E-value=43 Score=31.53 Aligned_cols=25 Identities=32% Similarity=0.407 Sum_probs=18.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHH
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLK 28 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~ 28 (524)
..|.|||+ ||-||...|.-|...|.
T Consensus 23 ~iI~I~G~--~GSGKST~a~~L~~~lg 47 (252)
T 1uj2_A 23 FLIGVSGG--TASGKSSVCAKIVQLLG 47 (252)
T ss_dssp EEEEEECS--TTSSHHHHHHHHHHHTT
T ss_pred EEEEEECC--CCCCHHHHHHHHHHHhh
Confidence 56899997 56689887776665443
No 377
>4ag6_A VIRB4 ATPase, type IV secretory pathway VIRB4 components-like P; hydrolase, type IV secretion, conjugation; 2.35A {Thermoanaerobacter pseudethanolicus} PDB: 4ag5_A
Probab=31.05 E-value=48 Score=33.47 Aligned_cols=50 Identities=28% Similarity=0.410 Sum_probs=37.6
Q ss_pred EEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc--------------cccCCC--CCCCccccc
Q 009814 3 YVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP--------------YLNTDA--GTMSPFEHG 56 (524)
Q Consensus 3 ~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dp--------------yln~d~--gtmsp~~hg 56 (524)
.++|+| -||-||-.++..+-..+..+|.+|.+ +|| |+++++ +.+||++..
T Consensus 37 ~~~i~G--~~G~GKs~~~~~~~~~~~~~~~~~~~--~D~~~~~~~~~~~~gg~~~~~~~~~~~~NPf~~~ 102 (392)
T 4ag6_A 37 NWTILA--KPGAGKSFTAKMLLLREYMQGSRVII--IDPEREYKEMCRKLGGVWINCTGGEGKINPLQVR 102 (392)
T ss_dssp CEEEEC--CTTSSHHHHHHHHHHHHHTTTCCEEE--EESSCCSHHHHHHTTCEEEETTSGGGCCCTTSCC
T ss_pred ceEEEc--CCCCCHHHHHHHHHHHHHHCCCEEEE--EeCCcCHHHHHHHcCCEEEEECCCCCeecceecc
Confidence 467777 58999999999998888889988877 576 455554 366777653
No 378
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=31.05 E-value=28 Score=33.29 Aligned_cols=32 Identities=31% Similarity=0.522 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
|-++||||- +|||+.+ .+.|.++|++|.+.=.
T Consensus 7 k~vlVTGas-~gIG~~i-----a~~l~~~G~~V~~~~r 38 (280)
T 1xkq_A 7 KTVIITGSS-NGIGRTT-----AILFAQEGANVTITGR 38 (280)
T ss_dssp CEEEETTCS-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-ChHHHHH-----HHHHHHCCCEEEEEeC
Confidence 789999984 7777754 4566778998877533
No 379
>3d02_A Putative LACI-type transcriptional regulator; periplasmic sugar-binding protein, structura genomics; HET: MSE GOL; 1.30A {Klebsiella pneumoniae subsp}
Probab=30.52 E-value=2.1e+02 Score=26.55 Aligned_cols=34 Identities=21% Similarity=0.009 Sum_probs=22.7
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEEh
Q 009814 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (524)
Q Consensus 361 ~~~DGIllpGGfG~rg~eg~i~air~are~~iP~LGIC 398 (524)
.++|||++.+.. .......++.+.+.++|+.-+.
T Consensus 60 ~~vdgiii~~~~----~~~~~~~~~~~~~~~ipvV~~~ 93 (303)
T 3d02_A 60 RKVDAITIVPND----ANVLEPVFKKARDAGIVVLTNE 93 (303)
T ss_dssp TTCSEEEECCSC----HHHHHHHHHHHHHTTCEEEEES
T ss_pred cCCCEEEEecCC----hHHHHHHHHHHHHCCCeEEEEe
Confidence 579999987631 1222345677778899987654
No 380
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=30.35 E-value=32 Score=32.82 Aligned_cols=32 Identities=28% Similarity=0.470 Sum_probs=24.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
|.++||||- +|||+. +.+.|-.+|++|.+.-.
T Consensus 16 k~~lVTGas-~gIG~a-----~a~~la~~G~~V~~~~r 47 (280)
T 3pgx_A 16 RVAFITGAA-RGQGRS-----HAVRLAAEGADIIACDI 47 (280)
T ss_dssp CEEEEESTT-SHHHHH-----HHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEec
Confidence 789999985 677754 55667788999887644
No 381
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=30.33 E-value=26 Score=33.88 Aligned_cols=31 Identities=32% Similarity=0.568 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|.++||||- ||||+. +.+.|-++|++|.+.-
T Consensus 9 k~vlVTGas-~GIG~a-----ia~~la~~G~~V~~~~ 39 (280)
T 3tox_A 9 KIAIVTGAS-SGIGRA-----AALLFAREGAKVVVTA 39 (280)
T ss_dssp CEEEESSTT-SHHHHH-----HHHHHHHTTCEEEECC
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEE
Confidence 679999985 777765 4566777899887753
No 382
>2gk3_A Putative cytoplasmic protein; STM3548, structural genomics, PSI, P structure initiative; 2.25A {Salmonella typhimurium} SCOP: c.23.16.9
Probab=30.07 E-value=38 Score=32.67 Aligned_cols=67 Identities=21% Similarity=0.099 Sum_probs=43.1
Q ss_pred HHHHHHHHHHcCCceeEEeeeEEeeCC----CccccccCCChhhhhHHHHhccCCCEEEECCCCCCC-c-----------
Q 009814 313 YLSILKALLHASVDLRKKLVIDWIPAC----DLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR-G----------- 376 (524)
Q Consensus 313 y~SI~~aL~~ag~~~~v~v~i~~i~s~----~le~~~~~~~p~~y~~~~~~l~~~DGIllpGGfG~r-g----------- 376 (524)
...+.++|+..++++.+. ++. .+. . ..+.|.++|.||+.+-+... .
T Consensus 42 ~~~l~~aL~~~~~~v~~~------~~~~~~~~fp-----~-------~~~~L~~yDvIIl~~~~~~~l~~~~~~~~~~~~ 103 (256)
T 2gk3_A 42 ATWLLECLRKGGVDIDYM------PAHTVQIAFP-----E-------SIDELNRYDVIVISDIGSNTFLLQNETFYQLKI 103 (256)
T ss_dssp CHHHHHHHHHTTCEEEEE------CHHHHHHCCC-----C-------SHHHHHTCSEEEEESCCHHHHHSCHHHHTTCCC
T ss_pred HHHHHHHHHhcCceEEEE------ecccchhhCC-----c-------ChhHHhcCCEEEEeCCchhhccccccccccccc
Confidence 356788999887665543 221 110 0 12468899999999843211 0
Q ss_pred hhHHHHHHHHHHHcCCCEEEE
Q 009814 377 VQGKILAAKYAREHRIPYLGI 397 (524)
Q Consensus 377 ~eg~i~air~are~~iP~LGI 397 (524)
.+...++++...+++..+++|
T Consensus 104 ~~~~~~~l~~~V~~GGgll~i 124 (256)
T 2gk3_A 104 KPNALESIKEYVKNGGGLLMI 124 (256)
T ss_dssp CCCHHHHHHHHHHTTCEEEEE
T ss_pred ChHHHHHHHHHHHhCCEEEEE
Confidence 034567888887889999999
No 383
>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*
Probab=30.07 E-value=40 Score=32.40 Aligned_cols=35 Identities=26% Similarity=0.291 Sum_probs=26.2
Q ss_pred EEEEEeCCc-cCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 009814 2 KYVLVTGGV-VSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (524)
Q Consensus 2 k~i~vtggv-~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dp 41 (524)
|.++||||- -||||+.++ +.|.++|++|.+.-.+|
T Consensus 9 k~~lVTGas~~~GIG~aia-----~~la~~G~~V~~~~r~~ 44 (297)
T 1d7o_A 9 KRAFIAGIADDNGYGWAVA-----KSLAAAGAEILVGTWVP 44 (297)
T ss_dssp CEEEEECCSSSSSHHHHHH-----HHHHHTTCEEEEEEEHH
T ss_pred CEEEEECCCCCCChHHHHH-----HHHHHCCCeEEEeeccc
Confidence 679999996 489997654 55677899998864443
No 384
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=30.01 E-value=32 Score=32.91 Aligned_cols=30 Identities=40% Similarity=0.682 Sum_probs=22.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
|-|+||||- +|||+.+ .+.|.++|++|.+.
T Consensus 27 k~vlITGas-ggiG~~l-----a~~L~~~G~~V~~~ 56 (302)
T 1w6u_A 27 KVAFITGGG-TGLGKGM-----TTLLSSLGAQCVIA 56 (302)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEECCC-chHHHHH-----HHHHHHCCCEEEEE
Confidence 679999985 6777654 45677789998876
No 385
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=30.00 E-value=31 Score=32.35 Aligned_cols=31 Identities=19% Similarity=0.307 Sum_probs=22.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHH---CCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKA---CGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~---~g~~v~~~k 38 (524)
|.++||||- ||||+.++ +.|.+ +|++|.+.=
T Consensus 7 k~~lVTGas-~gIG~~ia-----~~l~~~~~~G~~V~~~~ 40 (259)
T 1oaa_A 7 AVCVLTGAS-RGFGRALA-----PQLARLLSPGSVMLVSA 40 (259)
T ss_dssp EEEEESSCS-SHHHHHHH-----HHHHTTBCTTCEEEEEE
T ss_pred cEEEEeCCC-ChHHHHHH-----HHHHHhhcCCCeEEEEe
Confidence 789999985 77776553 44555 799887763
No 386
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=29.89 E-value=45 Score=30.77 Aligned_cols=35 Identities=23% Similarity=0.263 Sum_probs=25.2
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCC-CeeEEeeecc
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACG-LRVTCIKIDP 41 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g-~~v~~~k~dp 41 (524)
||-|+||||- ++|| +.|.+.|.++| ++|...-.+|
T Consensus 23 mk~vlVtGat-G~iG-----~~l~~~L~~~G~~~V~~~~R~~ 58 (236)
T 3qvo_A 23 MKNVLILGAG-GQIA-----RHVINQLADKQTIKQTLFARQP 58 (236)
T ss_dssp CEEEEEETTT-SHHH-----HHHHHHHTTCTTEEEEEEESSG
T ss_pred ccEEEEEeCC-cHHH-----HHHHHHHHhCCCceEEEEEcCh
Confidence 5789999974 4455 45566778889 8988876554
No 387
>4eaq_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, MTBI, transferase; HET: ATM; 1.85A {Staphylococcus aureus subsp} PDB: 4dwj_A* 4f4i_A
Probab=29.64 E-value=47 Score=31.18 Aligned_cols=31 Identities=19% Similarity=0.266 Sum_probs=26.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeE
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVT 35 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~ 35 (524)
++|+++|. +|-||+..+.-|...|.. |+.|.
T Consensus 27 ~~i~i~G~--~GsGKsT~~~~l~~~l~~-~~~~~ 57 (229)
T 4eaq_A 27 AFITFEGP--EGSGKTTVINEVYHRLVK-DYDVI 57 (229)
T ss_dssp EEEEEECC--TTSCHHHHHHHHHHHHTT-TSCEE
T ss_pred eEEEEEcC--CCCCHHHHHHHHHHHHhc-CCCce
Confidence 68999995 789999999999999877 76653
No 388
>1odf_A YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser2 intergenic region; yeast protein, ATP binding protein; 2.25A {Saccharomyces cerevisiae} SCOP: c.37.1.6
Probab=29.59 E-value=41 Score=33.06 Aligned_cols=41 Identities=22% Similarity=0.239 Sum_probs=31.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCC--CeeEEe-eeccccc
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACG--LRVTCI-KIDPYLN 44 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g--~~v~~~-k~dpyln 44 (524)
..|.|+|+ ||-||=..+..|..+|...| .++..+ -.|+|+-
T Consensus 32 ~ii~I~G~--sGsGKSTla~~L~~~l~~~g~~~~~~~iv~~D~f~~ 75 (290)
T 1odf_A 32 LFIFFSGP--QGSGKSFTSIQIYNHLMEKYGGEKSIGYASIDDFYL 75 (290)
T ss_dssp EEEEEECC--TTSSHHHHHHHHHHHHHHHHGGGSCEEEEEGGGGBC
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHhhhcCCCCceEEEeccccccC
Confidence 46788886 67789999999999998866 555555 7777653
No 389
>1m7g_A Adenylylsulfate kinase; APS kinase, transferase, sulfate Met nucleotide 2 kinase; HET: AV2 ADX ADP; 1.43A {Penicillium chrysogenum} SCOP: c.37.1.4 PDB: 1d6j_A* 1m7h_A* 3cr7_A*
Probab=29.58 E-value=41 Score=30.64 Aligned_cols=35 Identities=20% Similarity=0.144 Sum_probs=28.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHH-HCCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLK-ACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~-~~g~~v~~~k 38 (524)
++|+++|. +|-||-..+..|...|. ..|+++..+.
T Consensus 26 ~~i~~~G~--~GsGKsT~~~~l~~~l~~~~g~~~~~~~ 61 (211)
T 1m7g_A 26 LTIWLTGL--SASGKSTLAVELEHQLVRDRRVHAYRLD 61 (211)
T ss_dssp EEEEEECS--TTSSHHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred CEEEEECC--CCCCHHHHHHHHHHHhccccCCcEEEEC
Confidence 68899985 89999999999999998 7887765544
No 390
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=29.58 E-value=40 Score=31.74 Aligned_cols=32 Identities=31% Similarity=0.323 Sum_probs=23.9
Q ss_pred EEEEEeCCcc-CCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVV-SGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~-s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|-++||||-- +|||+.++ +.|.++|++|.+.=
T Consensus 9 k~vlVTGas~~~gIG~~ia-----~~l~~~G~~V~~~~ 41 (261)
T 2wyu_A 9 KKALVMGVTNQRSLGFAIA-----AKLKEAGAEVALSY 41 (261)
T ss_dssp CEEEEESCCSSSSHHHHHH-----HHHHHHTCEEEEEE
T ss_pred CEEEEECCCCCCcHHHHHH-----HHHHHCCCEEEEEc
Confidence 6799999964 78988654 45666799887753
No 391
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=29.47 E-value=45 Score=31.90 Aligned_cols=30 Identities=50% Similarity=0.633 Sum_probs=21.5
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
|| |+||||- |-+.+.+.+.|.++|++|..+
T Consensus 1 m~-vlVTGat------G~iG~~l~~~L~~~G~~V~~~ 30 (311)
T 2p5y_A 1 MR-VLVTGGA------GFIGSHIVEDLLARGLEVAVL 30 (311)
T ss_dssp CE-EEEETTT------SHHHHHHHHHHHTTTCEEEEE
T ss_pred CE-EEEEeCC------cHHHHHHHHHHHHCCCEEEEE
Confidence 44 8999974 444556666777789998775
No 392
>1uf9_A TT1252 protein; P-loop, nucleotide binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ATP; 2.80A {Thermus thermophilus} SCOP: c.37.1.1
Probab=29.39 E-value=41 Score=29.82 Aligned_cols=25 Identities=32% Similarity=0.567 Sum_probs=17.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCC
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGL 32 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~ 32 (524)
+.|++||+ +|-||.. ++++|..+|+
T Consensus 9 ~~I~i~G~--~GsGKST----~~~~La~~g~ 33 (203)
T 1uf9_A 9 IIIGITGN--IGSGKST----VAALLRSWGY 33 (203)
T ss_dssp EEEEEEEC--TTSCHHH----HHHHHHHTTC
T ss_pred eEEEEECC--CCCCHHH----HHHHHHHCCC
Confidence 57899998 6778854 5566666664
No 393
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=29.24 E-value=51 Score=31.66 Aligned_cols=32 Identities=31% Similarity=0.440 Sum_probs=23.5
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
||-|+||||- |-+.+.+.+.|.++|++|..+-
T Consensus 1 M~~ilVtGat------G~iG~~l~~~L~~~g~~V~~~~ 32 (330)
T 2c20_A 1 MNSILICGGA------GYIGSHAVKKLVDEGLSVVVVD 32 (330)
T ss_dssp -CEEEEETTT------SHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCC------cHHHHHHHHHHHhCCCEEEEEe
Confidence 6779999973 5555667777888899998753
No 394
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=29.22 E-value=2e+02 Score=26.46 Aligned_cols=31 Identities=13% Similarity=0.268 Sum_probs=22.4
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEEh
Q 009814 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (524)
Q Consensus 361 ~~~DGIllpGGfG~rg~eg~i~air~are~~iP~LGIC 398 (524)
.++||||+.+... ...++.+.+.++|+.-+.
T Consensus 62 ~~vdgiIi~~~~~-------~~~~~~l~~~~iPvV~i~ 92 (276)
T 3jy6_A 62 RGFDGLILQSFSN-------PQTVQEILHQQMPVVSVD 92 (276)
T ss_dssp TTCSEEEEESSCC-------HHHHHHHHTTSSCEEEES
T ss_pred CCCCEEEEecCCc-------HHHHHHHHHCCCCEEEEe
Confidence 5799999887432 346677777899987664
No 395
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=29.08 E-value=43 Score=31.46 Aligned_cols=31 Identities=19% Similarity=0.338 Sum_probs=23.4
Q ss_pred EEEEEeCCcc-CCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 2 KYVLVTGGVV-SGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 2 k~i~vtggv~-s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
|.++||||-= ||||+.+ .+.|.++|++|.+.
T Consensus 8 k~vlVTGasg~~GIG~~i-----a~~l~~~G~~V~~~ 39 (266)
T 3oig_A 8 RNIVVMGVANKRSIAWGI-----ARSLHEAGARLIFT 39 (266)
T ss_dssp CEEEEECCCSTTSHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEEcCCCCCcHHHHH-----HHHHHHCCCEEEEe
Confidence 6899999864 6888754 46677789987664
No 396
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=29.08 E-value=1.9e+02 Score=26.74 Aligned_cols=37 Identities=19% Similarity=0.139 Sum_probs=23.4
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEEh
Q 009814 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (524)
Q Consensus 361 ~~~DGIllpGGfG~rg~eg~i~air~are~~iP~LGIC 398 (524)
.++|||++.+....- .......++.+.+.++|+.-+.
T Consensus 70 ~~vdgiIi~~~~~~~-~~~~~~~~~~~~~~~iPvV~~~ 106 (298)
T 3tb6_A 70 QHIDGLIVEPTKSAL-QTPNIGYYLNLEKNGIPFAMIN 106 (298)
T ss_dssp TCCSEEEECCSSTTS-CCTTHHHHHHHHHTTCCEEEES
T ss_pred CCCCEEEEecccccc-cCCcHHHHHHHHhcCCCEEEEe
Confidence 579999997743210 0112346677778899987653
No 397
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=28.90 E-value=31 Score=32.59 Aligned_cols=35 Identities=29% Similarity=0.386 Sum_probs=26.5
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dp 41 (524)
||-|+||||- ++||+- +.+.|..+|++|.+.-.++
T Consensus 3 ~k~vlVTGas-g~IG~~-----la~~L~~~G~~V~~~~r~~ 37 (267)
T 3rft_A 3 MKRLLVTGAA-GQLGRV-----MRERLAPMAEILRLADLSP 37 (267)
T ss_dssp EEEEEEESTT-SHHHHH-----HHHHTGGGEEEEEEEESSC
T ss_pred CCEEEEECCC-CHHHHH-----HHHHHHhcCCEEEEEecCC
Confidence 4789999985 666654 5566778899998877665
No 398
>2wtz_A UDP-N-acetylmuramoyl-L-alanyl-D-glutamate- -2,6-diaminopimelate ligase; nucleotide-binding, peptidoglycan synthesis, MURE, C shape; HET: KCX UAG; 3.00A {Mycobacterium tuberculosis} PDB: 2xja_A*
Probab=28.75 E-value=55 Score=34.94 Aligned_cols=33 Identities=27% Similarity=0.253 Sum_probs=28.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|.|-||| +=||+.|++=|..+|++.|++|-.+.
T Consensus 147 ~vI~VTG----TnGKTTT~~ml~~iL~~~G~~~g~~g 179 (535)
T 2wtz_A 147 TVIGITG----TSGKTTTTYLVEAGLRAAGRVAGLIG 179 (535)
T ss_dssp EEEEEES----SSCHHHHHHHHHHHHHHTTCCEEEES
T ss_pred eEEEeeC----CCChHHHHHHHHHHHHHCCCCEEEEC
Confidence 6788888 56999999999999999999987653
No 399
>3u5c_A 40S ribosomal protein S0-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_A 3o30_A 3o2z_A 3u5g_A 3jyv_B* 1s1h_B
Probab=28.70 E-value=2e+02 Score=28.15 Aligned_cols=76 Identities=14% Similarity=0.154 Sum_probs=48.0
Q ss_pred EEEEEeccCCCcchHHHHHHHHHHcCCceeEEeeeEEeeCCCccccccCCChhhhhHHHHhccCCCEEEECCCCCCCchh
Q 009814 299 RIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQ 378 (524)
Q Consensus 299 ~IaiVGkY~~~~day~SI~~aL~~ag~~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~l~~~DGIllpGGfG~rg~e 378 (524)
+|.+||-- ..+...|.+.-...|+... +-.|++. .|+.... ..+..||.+||.. | .
T Consensus 72 ~vlfVgTk---~~~q~~V~k~A~~~g~~~v---~~rwlgG-tLTN~~t-----------~~f~~PdllvV~D-p---~-- 127 (252)
T 3u5c_A 72 DVVAISSR---TFGQRAVLKFAAHTGATPI---AGRFTPG-SFTNYIT-----------RSFKEPRLVIVTD-P---R-- 127 (252)
T ss_dssp GEEEEECS---HHHHHHHHHHHHHSSCEEE---ESCCCTT-SSSCTTS-----------TTCCCCSEEEESC-T---T--
T ss_pred EEEEEeCC---cHHHHHHHHHHHHhCCcee---cCcccCC-cccChhh-----------hhccCCceEEEeC-C---c--
Confidence 57778721 1244566666666776543 3467653 3332110 2357899999986 2 1
Q ss_pred HHHHHHHHHHHcCCCEEEEh
Q 009814 379 GKILAAKYAREHRIPYLGIC 398 (524)
Q Consensus 379 g~i~air~are~~iP~LGIC 398 (524)
....+++.|...+||+.|||
T Consensus 128 ~d~~ai~EA~~l~IP~Ial~ 147 (252)
T 3u5c_A 128 SDAQAIKEASYVNIPVIALT 147 (252)
T ss_dssp TTHHHHHHHHTTTCCEEEEE
T ss_pred cchHHHHHHHHcCCCEEEEE
Confidence 23578999999999999998
No 400
>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...
Probab=28.64 E-value=29 Score=34.40 Aligned_cols=30 Identities=30% Similarity=0.337 Sum_probs=22.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
|.|+||||- ||||+.+ .+.|-++|++|..+
T Consensus 3 k~vlVTGas-~GIG~al-----a~~L~~~G~~v~~v 32 (327)
T 1jtv_A 3 TVVLITGCS-SGIGLHL-----AVRLASDPSQSFKV 32 (327)
T ss_dssp EEEEESCCS-SHHHHHH-----HHHHHTCTTCCEEE
T ss_pred CEEEEECCC-CHHHHHH-----HHHHHHCCCceEEE
Confidence 789999985 7888765 45677788887654
No 401
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=28.45 E-value=34 Score=34.35 Aligned_cols=32 Identities=22% Similarity=0.360 Sum_probs=24.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
|.++||||- +|||+.+ .+.|-++|++|.+.=.
T Consensus 46 k~vlVTGas-~GIG~ai-----a~~La~~Ga~Vvl~~r 77 (346)
T 3kvo_A 46 CTVFITGAS-RGIGKAI-----ALKAAKDGANIVIAAK 77 (346)
T ss_dssp CEEEEETTT-SHHHHHH-----HHHHHTTTCEEEEEES
T ss_pred CEEEEeCCC-hHHHHHH-----HHHHHHCCCEEEEEEC
Confidence 789999996 7888754 4667778998877643
No 402
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=28.28 E-value=1.4e+02 Score=27.80 Aligned_cols=31 Identities=19% Similarity=0.400 Sum_probs=20.9
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 009814 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (524)
Q Consensus 361 ~~~DGIllpGGfG~rg~eg~i~air~are~~iP~LGI 397 (524)
.++||||+.+..... ..++.+.+.++|+.-+
T Consensus 65 ~~vdgiIi~~~~~~~------~~~~~l~~~~iPvV~i 95 (288)
T 3gv0_A 65 GSADGVIISKIEPND------PRVRFMTERNMPFVTH 95 (288)
T ss_dssp TCCSEEEEESCCTTC------HHHHHHHHTTCCEEEE
T ss_pred CCccEEEEecCCCCc------HHHHHHhhCCCCEEEE
Confidence 579999987632211 3466677788998755
No 403
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=28.04 E-value=2.5e+02 Score=27.59 Aligned_cols=30 Identities=10% Similarity=0.223 Sum_probs=21.1
Q ss_pred CeEEEEEeccCCCcchHHH-HHHHHHHcCCceeEE
Q 009814 297 PVRIAMVGKYTGLSDAYLS-ILKALLHASVDLRKK 330 (524)
Q Consensus 297 ~v~IaiVGkY~~~~day~S-I~~aL~~ag~~~~v~ 330 (524)
..+|.++| -+ .+=.| +.+.|...|+++.+.
T Consensus 4 ~~~i~~iG-iG---g~Gms~~A~~L~~~G~~V~~~ 34 (326)
T 3eag_A 4 MKHIHIIG-IG---GTFMGGLAAIAKEAGFEVSGC 34 (326)
T ss_dssp CCEEEEES-CC---SHHHHHHHHHHHHTTCEEEEE
T ss_pred CcEEEEEE-EC---HHHHHHHHHHHHhCCCEEEEE
Confidence 34788887 33 35565 678888899887765
No 404
>3cs3_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative; 2.40A {Enterococcus faecalis}
Probab=28.03 E-value=1.2e+02 Score=27.98 Aligned_cols=30 Identities=10% Similarity=-0.066 Sum_probs=20.0
Q ss_pred CCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 009814 362 GADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (524)
Q Consensus 362 ~~DGIllpGGfG~rg~eg~i~air~are~~iP~LGI 397 (524)
++|||++.+...+ . ..++.+.+.++|+.-+
T Consensus 57 ~vdgiI~~~~~~~---~---~~~~~l~~~~iPvV~~ 86 (277)
T 3cs3_A 57 MVDGAIILDWTFP---T---KEIEKFAERGHSIVVL 86 (277)
T ss_dssp TCSEEEEECTTSC---H---HHHHHHHHTTCEEEES
T ss_pred cccEEEEecCCCC---H---HHHHHHHhcCCCEEEE
Confidence 8999988764221 1 3456666788998655
No 405
>1a7j_A Phosphoribulokinase; transferase, calvin cycle; 2.50A {Rhodobacter sphaeroides} SCOP: c.37.1.6
Probab=27.97 E-value=36 Score=33.35 Aligned_cols=41 Identities=22% Similarity=0.425 Sum_probs=31.8
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpyln 44 (524)
+.|.|||| ||-||..+|..|...|...|+++..+-.|-|-.
T Consensus 6 ~iIgItG~--sGSGKSTva~~L~~~lg~~~~~~~vI~~D~~~r 46 (290)
T 1a7j_A 6 PIISVTGS--SGAGTSTVKHTFDQIFRREGVKAVSIEGDAFHR 46 (290)
T ss_dssp CEEEEESC--C---CCTHHHHHHHHHHHHTCCEEEEEGGGGBS
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHhhcCCCeeEeecchhhc
Confidence 36889996 788999999999998888888888888887753
No 406
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=27.71 E-value=57 Score=29.54 Aligned_cols=34 Identities=12% Similarity=0.238 Sum_probs=23.5
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHH-HCCCeeEEeeec
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLK-ACGLRVTCIKID 40 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~-~~g~~v~~~k~d 40 (524)
||-|+||||- ++||+.+ .+.|. ++|++|..+-.+
T Consensus 5 mk~vlVtGas-g~iG~~~-----~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 5 YXYITILGAA-GQIAQXL-----TATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp CSEEEEESTT-SHHHHHH-----HHHHHHHCCCEEEEEESS
T ss_pred EEEEEEEeCC-cHHHHHH-----HHHHHhcCCceEEEEecC
Confidence 4779999974 5566544 34444 899999887554
No 407
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=27.50 E-value=60 Score=31.34 Aligned_cols=34 Identities=38% Similarity=0.427 Sum_probs=25.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dp 41 (524)
|-|+||||- |-+.+.|.+.|.++|++|...-.||
T Consensus 10 ~~vlVTGat------GfIG~~l~~~Ll~~G~~V~~~~r~~ 43 (338)
T 2rh8_A 10 KTACVVGGT------GFVASLLVKLLLQKGYAVNTTVRDP 43 (338)
T ss_dssp CEEEEECTT------SHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred CEEEEECCc------hHHHHHHHHHHHHCCCEEEEEEcCc
Confidence 569999973 5566677777888999998754443
No 408
>1y63_A LMAJ004144AAA protein; structural genomics, protein structure initiative, PSI, SGPP structural genomics of pathogenic protozoa consortium; HET: ADP; 1.70A {Leishmania major} SCOP: c.37.1.1
Probab=27.39 E-value=38 Score=30.18 Aligned_cols=22 Identities=36% Similarity=0.505 Sum_probs=16.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHH
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGV 25 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ 25 (524)
+.|++||+ +|-||..++.-|..
T Consensus 11 ~~I~l~G~--~GsGKSTv~~~La~ 32 (184)
T 1y63_A 11 INILITGT--PGTGKTSMAEMIAA 32 (184)
T ss_dssp CEEEEECS--TTSSHHHHHHHHHH
T ss_pred CEEEEECC--CCCCHHHHHHHHHH
Confidence 57999997 78899765554444
No 409
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=27.23 E-value=1.8e+02 Score=26.98 Aligned_cols=31 Identities=23% Similarity=0.376 Sum_probs=21.4
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 009814 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (524)
Q Consensus 361 ~~~DGIllpGGfG~rg~eg~i~air~are~~iP~LGI 397 (524)
.++|||++.+...+. ..++.+.+.++|+.-+
T Consensus 68 ~~vdgiIi~~~~~~~------~~~~~l~~~~iPvV~~ 98 (292)
T 3k4h_A 68 RQIGGIILLYSREND------RIIQYLHEQNFPFVLI 98 (292)
T ss_dssp TCCCEEEESCCBTTC------HHHHHHHHTTCCEEEE
T ss_pred CCCCEEEEeCCCCCh------HHHHHHHHCCCCEEEE
Confidence 579999987643221 3566777889998754
No 410
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=27.22 E-value=40 Score=31.61 Aligned_cols=31 Identities=29% Similarity=0.290 Sum_probs=23.3
Q ss_pred EEEEEeCCcc-CCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 2 KYVLVTGGVV-SGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 2 k~i~vtggv~-s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
|-++||||-= +|||+. +.+.|-.+|++|.+.
T Consensus 21 k~vlITGas~~~giG~~-----~a~~l~~~G~~v~~~ 52 (267)
T 3gdg_A 21 KVVVVTGASGPKGMGIE-----AARGCAEMGAAVAIT 52 (267)
T ss_dssp CEEEETTCCSSSSHHHH-----HHHHHHHTSCEEEEC
T ss_pred CEEEEECCCCCCChHHH-----HHHHHHHCCCeEEEE
Confidence 7899999954 688864 456677789887664
No 411
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=27.20 E-value=61 Score=28.79 Aligned_cols=33 Identities=27% Similarity=0.304 Sum_probs=23.5
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dp 41 (524)
|| |+||||- ++||+.+ .+.|. +|++|.++-.++
T Consensus 4 M~-vlVtGas-g~iG~~~-----~~~l~-~g~~V~~~~r~~ 36 (202)
T 3d7l_A 4 MK-ILLIGAS-GTLGSAV-----KERLE-KKAEVITAGRHS 36 (202)
T ss_dssp CE-EEEETTT-SHHHHHH-----HHHHT-TTSEEEEEESSS
T ss_pred cE-EEEEcCC-cHHHHHH-----HHHHH-CCCeEEEEecCc
Confidence 45 8999984 6666655 44556 799999875554
No 412
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=27.16 E-value=53 Score=30.97 Aligned_cols=34 Identities=21% Similarity=0.109 Sum_probs=23.0
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHC-CCeeEEeeecc
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKAC-GLRVTCIKIDP 41 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~-g~~v~~~k~dp 41 (524)
|| |+||||- ..||+ .+-+.|..+ |++|.++--+|
T Consensus 1 M~-ilVtGat-G~iG~-----~l~~~L~~~~g~~V~~~~R~~ 35 (289)
T 3e48_A 1 MN-IMLTGAT-GHLGT-----HITNQAIANHIDHFHIGVRNV 35 (289)
T ss_dssp CC-EEEETTT-SHHHH-----HHHHHHHHTTCTTEEEEESSG
T ss_pred CE-EEEEcCC-chHHH-----HHHHHHhhCCCCcEEEEECCH
Confidence 45 8999975 44554 444446666 99999886654
No 413
>1yrb_A ATP(GTP)binding protein; GTPase, P-loop, rossman fold, GDP, HYDR; HET: GDP; 1.75A {Pyrococcus abyssi} SCOP: c.37.1.10 PDB: 1yr6_A* 1yr8_A* 1yr9_A* 1yra_A* 1yr7_A* 2oxr_A*
Probab=27.11 E-value=77 Score=29.37 Aligned_cols=38 Identities=24% Similarity=0.443 Sum_probs=32.1
Q ss_pred EEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 009814 4 VLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (524)
Q Consensus 4 i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpyln 44 (524)
++++| -.|.||=.++..++..|. +|++|.++-.||--+
T Consensus 17 ~~~~G--kgGvGKTTl~~~La~~l~-~g~~v~vvd~D~~~~ 54 (262)
T 1yrb_A 17 VVFVG--TAGSGKTTLTGEFGRYLE-DNYKVAYVNLDTGVK 54 (262)
T ss_dssp EEEEC--STTSSHHHHHHHHHHHHT-TTSCEEEEECCSSCS
T ss_pred EEEeC--CCCCCHHHHHHHHHHHHH-CCCeEEEEeCCCCcc
Confidence 44444 478999999999999999 999999999999644
No 414
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=26.73 E-value=55 Score=31.66 Aligned_cols=34 Identities=32% Similarity=0.344 Sum_probs=24.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dp 41 (524)
|-|+||||- |-+.+.+.+.|.++|++|...-.||
T Consensus 6 ~~vlVTGat------GfIG~~l~~~L~~~G~~V~~~~r~~ 39 (337)
T 2c29_D 6 ETVCVTGAS------GFIGSWLVMRLLERGYTVRATVRDP 39 (337)
T ss_dssp CEEEETTTT------SHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred CEEEEECCc------hHHHHHHHHHHHHCCCEEEEEECCc
Confidence 669999974 4555667777778999998764443
No 415
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=26.73 E-value=2e+02 Score=26.72 Aligned_cols=32 Identities=9% Similarity=-0.005 Sum_probs=21.4
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEEh
Q 009814 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (524)
Q Consensus 361 ~~~DGIllpGGfG~rg~eg~i~air~are~~iP~LGIC 398 (524)
.++|||++.+...+ . ..++.+.+.++|+.-+.
T Consensus 66 ~~vdgiIi~~~~~~---~---~~~~~l~~~~iPvV~~~ 97 (290)
T 2rgy_A 66 RDCDGVVVISHDLH---D---EDLDELHRMHPKMVFLN 97 (290)
T ss_dssp TTCSEEEECCSSSC---H---HHHHHHHHHCSSEEEES
T ss_pred cCccEEEEecCCCC---H---HHHHHHhhcCCCEEEEc
Confidence 57999999764322 1 34556666789987764
No 416
>2grj_A Dephospho-COA kinase; TM1387, EC 2.7.1.24, dephosphocoenzyme kinase, structural genomics, joint center for structural GE JCSG; HET: ADP COD; 2.60A {Thermotoga maritima}
Probab=26.63 E-value=48 Score=30.48 Aligned_cols=26 Identities=38% Similarity=0.451 Sum_probs=16.9
Q ss_pred EEEEeCCccCCcchHHHHHHHHHHHHHC-CCee
Q 009814 3 YVLVTGGVVSGLGKGVTASSIGVLLKAC-GLRV 34 (524)
Q Consensus 3 ~i~vtggv~s~lgkgi~~~s~g~ll~~~-g~~v 34 (524)
.|.+||| +|=||-.+ ++.|+.+ |+.|
T Consensus 14 iIgltG~--~GSGKSTv----a~~L~~~lg~~v 40 (192)
T 2grj_A 14 VIGVTGK--IGTGKSTV----CEILKNKYGAHV 40 (192)
T ss_dssp EEEEECS--TTSSHHHH----HHHHHHHHCCEE
T ss_pred EEEEECC--CCCCHHHH----HHHHHHhcCCEE
Confidence 5889999 45578554 5555555 7543
No 417
>4eyg_A Twin-arginine translocation pathway signal; PSI-biology, MCSG, midwest center for structural genomics, transporter; HET: VNL; 1.86A {Rhodopseudomonas palustris} PDB: 4ey3_A* 3t0n_A* 4eyk_A*
Probab=26.42 E-value=3.4e+02 Score=25.84 Aligned_cols=92 Identities=15% Similarity=0.094 Sum_probs=50.2
Q ss_pred CCCeEEEEEeccCCCcc-----hHHHHHHHHHHcCC-ceeEEeeeEEeeCCCccccccCCChhhhhHHHHh-c--cCCCE
Q 009814 295 HEPVRIAMVGKYTGLSD-----AYLSILKALLHASV-DLRKKLVIDWIPACDLEDATEKENPDAYKAAWKL-L--KGADG 365 (524)
Q Consensus 295 ~~~v~IaiVGkY~~~~d-----ay~SI~~aL~~ag~-~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~-l--~~~DG 365 (524)
.++++|+++........ ....+..+++..+. -.+.++++.+.+... +|....++.+. + .++|+
T Consensus 4 ~~~i~IG~~~p~sg~~~~~g~~~~~g~~~a~~~~~~~i~G~~i~l~~~D~~~--------~~~~~~~~~~~li~~~~v~~ 75 (368)
T 4eyg_A 4 EDTFKVGLIVPMTGGQASTGKQIDNAIKLYIKKHGDTVAGKKIEVILKDDAA--------IPDNTKRLAQELIVNDKVNV 75 (368)
T ss_dssp CCEEEEEEEECSSSTTHHHHHHHHHHHHHHHHHHCSEETTEEEEEEEEECTT--------CHHHHHHHHHHHHHTSCCSE
T ss_pred CCcEEEEEEeCCcCcchhccHHHHHHHHHHHHHcCCCCCCeEEEEEEeCCCC--------CHHHHHHHHHHHHhcCCcEE
Confidence 35689999986643211 22334455666554 234566666666432 23222222233 2 57999
Q ss_pred EEECCCCCCCchhHHHHHHHHHHHcCCCEEEEhH
Q 009814 366 ILVPGGFGNRGVQGKILAAKYAREHRIPYLGICL 399 (524)
Q Consensus 366 IllpGGfG~rg~eg~i~air~are~~iP~LGICL 399 (524)
||-|-+. .....++..+.+.++|++..+.
T Consensus 76 iiG~~~s-----~~~~~~~~~~~~~~ip~i~~~~ 104 (368)
T 4eyg_A 76 IAGFGIT-----PAALAAAPLATQAKVPEIVMAA 104 (368)
T ss_dssp EEECSSH-----HHHHHHHHHHHHHTCCEEESSC
T ss_pred EECCCcc-----HHHHHHHHHHHhCCceEEeccC
Confidence 8844321 1233455667778999987753
No 418
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=25.88 E-value=64 Score=30.78 Aligned_cols=35 Identities=17% Similarity=0.145 Sum_probs=24.9
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dp 41 (524)
+|-|+||||- |-+.+.|.+.|.++|++|..+-.+|
T Consensus 12 ~~~vlVTGat------G~iG~~l~~~L~~~G~~V~~~~r~~ 46 (321)
T 2pk3_A 12 SMRALITGVA------GFVGKYLANHLTEQNVEVFGTSRNN 46 (321)
T ss_dssp -CEEEEETTT------SHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred cceEEEECCC------ChHHHHHHHHHHHCCCEEEEEecCC
Confidence 3669999984 4455666677788899998865443
No 419
>2if2_A Dephospho-COA kinase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 3.00A {Aquifex aeolicus}
Probab=25.70 E-value=42 Score=30.08 Aligned_cols=23 Identities=35% Similarity=0.414 Sum_probs=17.0
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHH
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGV 25 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ 25 (524)
|+.|.+||+ +|-||...+..|..
T Consensus 1 m~~i~i~G~--~GsGKSTl~~~L~~ 23 (204)
T 2if2_A 1 MKRIGLTGN--IGCGKSTVAQMFRE 23 (204)
T ss_dssp CCEEEEEEC--TTSSHHHHHHHHHH
T ss_pred CeEEEEECC--CCcCHHHHHHHHHH
Confidence 678999998 77889765555444
No 420
>3da7_A Barnase circular permutant; circular permutant, protein-protein complex, endonuclease, cytoplasm, protein binding; 2.25A {Bacillus amyloliquefaciens}
Probab=25.56 E-value=50 Score=28.51 Aligned_cols=36 Identities=17% Similarity=0.234 Sum_probs=24.8
Q ss_pred ccceEEEccCCccccCCCCccccccCCCCCCCCcccchHhhHHHHhh
Q 009814 54 EHGEVFVLDDGGEVDLDLGNYERFMDIKLTRDNNITTGKIYQSVIDK 100 (524)
Q Consensus 54 ~hgevfv~~dg~e~dldlg~yerf~~~~~~~~~n~t~g~iy~~vi~k 100 (524)
..|++|+|.| ||+-|.-+..+ .-+|++.---.-|+.
T Consensus 26 ~dg~~y~T~D---------HY~tF~~i~~~--~~~n~~~~V~~Yl~~ 61 (111)
T 3da7_A 26 SDWLIYKTTD---------HYQTFTKIRCA--QVINTFDGVADYLQT 61 (111)
T ss_dssp TTCCEEEESS---------TTSCCEECCCS--SCCSHHHHHHHHHHH
T ss_pred CCCCEEEecc---------hhhhhhcchhh--hhcCCchHHHHHHHH
Confidence 4689999988 99999999877 445554433333433
No 421
>2qt1_A Nicotinamide riboside kinase 1; non-protein kinase, NAD+, NRK1, nicotinic acid riboside kinase activity, NAD biosynthesis; HET: NNR; 1.32A {Homo sapiens} PDB: 2qsy_A* 2qsz_A* 2qt0_A* 2p0e_A* 2qg6_A* 2ql6_A*
Probab=25.37 E-value=41 Score=30.36 Aligned_cols=37 Identities=19% Similarity=0.278 Sum_probs=26.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccccc
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLN 44 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpyln 44 (524)
+.|.+||+ ||-||...+..|...+. .+..+-.|+|+-
T Consensus 22 ~~i~i~G~--~GsGKSTl~~~L~~~~~----~~~~i~~D~~~~ 58 (207)
T 2qt1_A 22 FIIGISGV--TNSGKTTLAKNLQKHLP----NCSVISQDDFFK 58 (207)
T ss_dssp EEEEEEES--TTSSHHHHHHHHHTTST----TEEEEEGGGGBC
T ss_pred eEEEEECC--CCCCHHHHHHHHHHhcC----CcEEEeCCcccc
Confidence 56889997 57789887777666442 467777888764
No 422
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=25.34 E-value=1.8e+02 Score=28.07 Aligned_cols=32 Identities=6% Similarity=-0.034 Sum_probs=22.5
Q ss_pred CCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEEh
Q 009814 362 GADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (524)
Q Consensus 362 ~~DGIllpGGfG~rg~eg~i~air~are~~iP~LGIC 398 (524)
++|||++.+ . .. .....++.+.+.++|+.-+.
T Consensus 62 ~vDgiIi~~-~-~~---~~~~~~~~~~~~giPvV~~~ 93 (350)
T 3h75_A 62 KPDYLMLVN-E-QY---VAPQILRLSQGSGIKLFIVN 93 (350)
T ss_dssp CCSEEEEEC-C-SS---HHHHHHHHHTTSCCEEEEEE
T ss_pred CCCEEEEeC-c-hh---hHHHHHHHHHhCCCcEEEEc
Confidence 899999975 2 11 22356777888899998764
No 423
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=25.31 E-value=1.5e+02 Score=28.91 Aligned_cols=68 Identities=16% Similarity=0.113 Sum_probs=32.3
Q ss_pred CeEEEEEeccCCCcchHHHHHHHHHHcC-CceeEEeeeEEeeCCCcccc-ccCCChhhhhHHHHhcc--CCCEEEECCC
Q 009814 297 PVRIAMVGKYTGLSDAYLSILKALLHAS-VDLRKKLVIDWIPACDLEDA-TEKENPDAYKAAWKLLK--GADGILVPGG 371 (524)
Q Consensus 297 ~v~IaiVGkY~~~~day~SI~~aL~~ag-~~~~v~v~i~~i~s~~le~~-~~~~~p~~y~~~~~~l~--~~DGIllpGG 371 (524)
+++|+++| .+... ....++|...+ +++....+ .+.+..+.- .....+..|.+..+.+. ++|.|+++--
T Consensus 5 ~~rigiiG-~G~ig---~~~~~~l~~~~~~~~~av~d---~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp 76 (329)
T 3evn_A 5 KVRYGVVS-TAKVA---PRFIEGVRLAGNGEVVAVSS---RTLESAQAFANKYHLPKAYDKLEDMLADESIDVIYVATI 76 (329)
T ss_dssp CEEEEEEB-CCTTH---HHHHHHHHHHCSEEEEEEEC---SCSSTTCC---CCCCSCEESCHHHHHTCTTCCEEEECSC
T ss_pred ceEEEEEe-chHHH---HHHHHHHHhCCCcEEEEEEc---CCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCC
Confidence 57999999 66543 23456665543 22222111 112212110 00011223444445565 6899998763
No 424
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=25.06 E-value=76 Score=31.77 Aligned_cols=93 Identities=15% Similarity=0.077 Sum_probs=46.1
Q ss_pred CeEEEEEeccCCCcchHHHHHHHHHHcCCceeEEeeeEEeeCCCccccccCCChhhhhHHHHhcc--CCCEEEECCCCCC
Q 009814 297 PVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLK--GADGILVPGGFGN 374 (524)
Q Consensus 297 ~v~IaiVGkY~~~~day~SI~~aL~~ag~~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~l~--~~DGIllpGGfG~ 374 (524)
+++|||+| .+.. .......+|.+.++++....+...-.++.+.. .. ..+..|.+..+.+. ++|.|+|..-+..
T Consensus 26 ~irvgiiG-~G~~--~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~-~~-~~~~~~~~~~~ll~~~~vD~V~I~tp~~~ 100 (361)
T 3u3x_A 26 ELRFAAVG-LNHN--HIYGQVNCLLRAGARLAGFHEKDDALAAEFSA-VY-ADARRIATAEEILEDENIGLIVSAAVSSE 100 (361)
T ss_dssp CCEEEEEC-CCST--THHHHHHHHHHTTCEEEEEECSCHHHHHHHHH-HS-SSCCEESCHHHHHTCTTCCEEEECCCHHH
T ss_pred CcEEEEEC-cCHH--HHHHHHHHhhcCCcEEEEEEcCCHHHHHHHHH-Hc-CCCcccCCHHHHhcCCCCCEEEEeCChHH
Confidence 47999999 5532 22345566666666654432211000000100 00 01223444445554 4899999874321
Q ss_pred -------------------C---chhHHHHHHHHHHHcCCCE
Q 009814 375 -------------------R---GVQGKILAAKYAREHRIPY 394 (524)
Q Consensus 375 -------------------r---g~eg~i~air~are~~iP~ 394 (524)
| ..+...+.++.|+++++++
T Consensus 101 H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~l 142 (361)
T 3u3x_A 101 RAELAIRAMQHGKDVLVDKPGMTSFDQLAKLRRVQAETGRIF 142 (361)
T ss_dssp HHHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHHHTTCCCE
T ss_pred HHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEE
Confidence 1 1244555666677777664
No 425
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=24.97 E-value=45 Score=30.70 Aligned_cols=25 Identities=20% Similarity=0.493 Sum_probs=18.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCC
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGL 32 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~ 32 (524)
|.|+||||- +|||+.++ +.|-.+|+
T Consensus 3 k~vlITGas-ggiG~~la-----~~l~~~G~ 27 (244)
T 2bd0_A 3 HILLITGAG-KGIGRAIA-----LEFARAAR 27 (244)
T ss_dssp EEEEEETTT-SHHHHHHH-----HHHHHHTT
T ss_pred CEEEEECCC-ChHHHHHH-----HHHHHhcC
Confidence 789999984 77777655 44555677
No 426
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=24.89 E-value=1.8e+02 Score=27.40 Aligned_cols=34 Identities=29% Similarity=0.337 Sum_probs=22.4
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEEh
Q 009814 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (524)
Q Consensus 361 ~~~DGIllpGGfG~rg~eg~i~air~are~~iP~LGIC 398 (524)
.++|||++.+... ... ...++.+.+.++|+.-+.
T Consensus 56 ~~vdgiIi~~~~~-~~~---~~~~~~~~~~~iPvV~~~ 89 (313)
T 2h3h_A 56 EGVNGIAIAPSDP-TAV---IPTIKKALEMGIPVVTLD 89 (313)
T ss_dssp TTCSEEEECCSST-TTT---HHHHHHHHHTTCCEEEES
T ss_pred cCCCEEEEeCCCh-HHH---HHHHHHHHHCCCeEEEeC
Confidence 5799999876322 121 245667777899998763
No 427
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=24.85 E-value=1.9e+02 Score=26.85 Aligned_cols=32 Identities=13% Similarity=0.298 Sum_probs=21.2
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEEh
Q 009814 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (524)
Q Consensus 361 ~~~DGIllpGGfG~rg~eg~i~air~are~~iP~LGIC 398 (524)
.++||||+.+...+. ..++.+.+.++|+.-+.
T Consensus 63 ~~vdgiIi~~~~~~~------~~~~~l~~~~iPvV~~~ 94 (287)
T 3bbl_A 63 GNVDGFVLSSINYND------PRVQFLLKQKFPFVAFG 94 (287)
T ss_dssp TCCSEEEECSCCTTC------HHHHHHHHTTCCEEEES
T ss_pred CCCCEEEEeecCCCc------HHHHHHHhcCCCEEEEC
Confidence 579999987633221 34566667789987664
No 428
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=24.59 E-value=57 Score=31.55 Aligned_cols=31 Identities=16% Similarity=0.230 Sum_probs=23.5
Q ss_pred EEEEEeCCcc-CCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 2 KYVLVTGGVV-SGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 2 k~i~vtggv~-s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
|-++||||-= +|||+.+ .+.|-++|++|.+.
T Consensus 32 k~~lVTGasg~~GIG~ai-----a~~la~~G~~V~~~ 63 (293)
T 3grk_A 32 KRGLILGVANNRSIAWGI-----AKAAREAGAELAFT 63 (293)
T ss_dssp CEEEEECCCSSSSHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEEcCCCCCcHHHHH-----HHHHHHCCCEEEEE
Confidence 7899999964 5788765 45677789988765
No 429
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=24.46 E-value=50 Score=31.88 Aligned_cols=39 Identities=26% Similarity=0.270 Sum_probs=25.9
Q ss_pred EEEEEeCCcc----------CCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 009814 2 KYVLVTGGVV----------SGLGKGVTASSIGVLLKACGLRVTCIKID 40 (524)
Q Consensus 2 k~i~vtggv~----------s~lgkgi~~~s~g~ll~~~g~~v~~~k~d 40 (524)
|-|+||||=- |--=-|-...+|.+.|..+|++|+++--.
T Consensus 4 k~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~ 52 (232)
T 2gk4_A 4 MKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTK 52 (232)
T ss_dssp CEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 6689999942 11112334456678888999999988543
No 430
>2qh8_A Uncharacterized protein; conserved domain protein, structural genomics, PSI-2, MCSG, BIG_563.1, protein structure initiative; HET: HIS; 2.20A {Vibrio cholerae o1 biovar eltor str} PDB: 3lkv_A*
Probab=24.34 E-value=1.8e+02 Score=27.55 Aligned_cols=84 Identities=14% Similarity=0.046 Sum_probs=44.0
Q ss_pred eEEEEEeccCCC--cchHHHHHHHHHHcCCceeEEeeeEEeeCCCccccccCCChhhhhHHHHhccCCCEEEECCCCCCC
Q 009814 298 VRIAMVGKYTGL--SDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNR 375 (524)
Q Consensus 298 v~IaiVGkY~~~--~day~SI~~aL~~ag~~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~l~~~DGIllpGGfG~r 375 (524)
-+|+++..-... .+.+....++++..|+.+. ..|+... + ..+....+.+..+|+|+.++ |.
T Consensus 141 ~~I~~i~~~~~~~~~~r~~g~~~al~~~gi~~~----~~~~~~~--~--------~~~~~~~~l~~~~dai~~~~---D~ 203 (302)
T 2qh8_A 141 KSIGVVYNPGEANAVSLMELLKLSAAKHGIKLV----EATALKS--A--------DVQSATQAIAEKSDVIYALI---DN 203 (302)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHTTCEEE----EEECSSG--G--------GHHHHHHHHGGGCSEEEECS---CH
T ss_pred cEEEEEecCCCcchHHHHHHHHHHHHHcCCEEE----EEecCCh--H--------HHHHHHHHHhccCCEEEECC---cH
Confidence 379988532211 0122344577777776543 2343211 1 11222333456899999986 32
Q ss_pred chhHHHHHHH-HHHHcCCCEEEEh
Q 009814 376 GVQGKILAAK-YAREHRIPYLGIC 398 (524)
Q Consensus 376 g~eg~i~air-~are~~iP~LGIC 398 (524)
-.-|.+.+++ .++..++|++|.=
T Consensus 204 ~a~g~~~~l~~~~~~~~i~vig~d 227 (302)
T 2qh8_A 204 TVASAIEGMIVAANQAKTPVFGAA 227 (302)
T ss_dssp HHHTTHHHHHHHHHHTTCCEEESS
T ss_pred hHHHHHHHHHHHHHHcCCCEEECC
Confidence 2223344443 4556789999963
No 431
>2zkq_b 40S ribosomal protein SA; protein-RNA complex, 40S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=24.27 E-value=1.7e+02 Score=29.37 Aligned_cols=76 Identities=9% Similarity=0.173 Sum_probs=46.4
Q ss_pred EEEEEeccCCCcchHHHHHHHHHHcCCceeEEeeeEEeeCCCccccccCCChhhhhHHHHhccCCCEEEECCCCCCCchh
Q 009814 299 RIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQ 378 (524)
Q Consensus 299 ~IaiVGkY~~~~day~SI~~aL~~ag~~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~l~~~DGIllpGGfG~rg~e 378 (524)
+|.+||-- ..+...|.+.-++.|+... +-+|++-. |++... ..+..||.|||..- .
T Consensus 73 ~ILfVgTk---~~aq~~V~k~A~~~g~~yv---~~RWlgG~-LTN~~t-----------~~f~~PdlliV~Dp----~-- 128 (295)
T 2zkq_b 73 DVSVISSR---NTGQRAVLKFAAATGATPI---AGRFTPGT-FTNQIQ-----------AAFREPRLLVVTDP----R-- 128 (295)
T ss_dssp GEEEEECS---HHHHHHHHHHHHHHCCEEE---ESSCCCC--CCCTTC-----------SSCCCCSEEEESCT----T--
T ss_pred eEEEEeCc---HHHHHHHHHHHHHhCCcee---cceEeccc-ccCccc-----------ccccCCCeEEEeCC----C--
Confidence 57777621 1133456666666676433 33676542 332110 13567999998862 1
Q ss_pred HHHHHHHHHHHcCCCEEEEh
Q 009814 379 GKILAAKYAREHRIPYLGIC 398 (524)
Q Consensus 379 g~i~air~are~~iP~LGIC 398 (524)
....++++|...+||+.|||
T Consensus 129 ~e~~AI~EA~~lgIPvIalv 148 (295)
T 2zkq_b 129 ADHQPLTEASYVNLPTIALC 148 (295)
T ss_dssp TTHHHHHHHHHHTCCEEEEE
T ss_pred cchhHHHHHHHhCCCEEEEe
Confidence 22578999999999999998
No 432
>2x7x_A Sensor protein; transferase, sensor histidine kinase; HET: FRU; 2.64A {Bacteroides thetaiotaomicron}
Probab=23.71 E-value=4.2e+02 Score=25.03 Aligned_cols=33 Identities=15% Similarity=0.204 Sum_probs=22.0
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 009814 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (524)
Q Consensus 361 ~~~DGIllpGGfG~rg~eg~i~air~are~~iP~LGI 397 (524)
.++||||+.+.. .......++.+.+.++|+.-+
T Consensus 61 ~~vdgiIi~~~~----~~~~~~~~~~~~~~~iPvV~~ 93 (325)
T 2x7x_A 61 EGVDLLIISANE----AAPMTPIVEEAYQKGIPVILV 93 (325)
T ss_dssp TTCSEEEECCSS----HHHHHHHHHHHHHTTCCEEEE
T ss_pred cCCCEEEEeCCC----HHHHHHHHHHHHHCCCeEEEe
Confidence 579999997632 112234567777789998765
No 433
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=23.64 E-value=68 Score=30.35 Aligned_cols=31 Identities=19% Similarity=0.293 Sum_probs=24.1
Q ss_pred EEEEEeCCc-cCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 2 KYVLVTGGV-VSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 2 k~i~vtggv-~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
|-++|||+- -+|||++| .+.|-+.|.+|.+.
T Consensus 7 K~alVTGaa~~~GIG~ai-----A~~la~~Ga~Vvi~ 38 (256)
T 4fs3_A 7 KTYVIMGIANKRSIAFGV-----AKVLDQLGAKLVFT 38 (256)
T ss_dssp CEEEEECCCSTTCHHHHH-----HHHHHHTTCEEEEE
T ss_pred CEEEEECCCCCchHHHHH-----HHHHHHCCCEEEEE
Confidence 789999975 35888765 56788899998775
No 434
>2vfb_A Arylamine N-acetyltransferase; NAT, acetyl COA, mycobacteria, actyltransferase; 2.00A {Mycobacterium marinum} PDB: 2vfc_A* 3ltw_A*
Probab=23.59 E-value=91 Score=30.60 Aligned_cols=53 Identities=23% Similarity=0.226 Sum_probs=40.3
Q ss_pred HHHHHHHHCCCeeEEeeecccccCCCCCC-CccccceEEEccCCcc----ccCCCCcc
Q 009814 22 SIGVLLKACGLRVTCIKIDPYLNTDAGTM-SPFEHGEVFVLDDGGE----VDLDLGNY 74 (524)
Q Consensus 22 s~g~ll~~~g~~v~~~k~dpyln~d~gtm-sp~~hgevfv~~dg~e----~dldlg~y 74 (524)
-++.+|++.||+|+.+.-=-|.+-+++.- .|..|==..|+-||.. +|.=+|.+
T Consensus 76 Lf~~~L~~LGF~V~~~~arV~~~~~~~~~~~~~~H~~l~V~idg~~~~ylvDVGFG~~ 133 (280)
T 2vfb_A 76 LIGYVLAELGYRVRRLAGRVVWLAPPDAPTPAQTHTVLAVTFPGCQGPYLVDVGFGGM 133 (280)
T ss_dssp HHHHHHHHHTCEEEEEEEEECTTCCTTSCCCCSCEEEEEEECTTCSSCEEECSCSGGG
T ss_pred HHHHHHHHCCCeEEEEEEEEEeCCCCCCCCCCCCcEEEEEEECCeEEEEEEecCCCcc
Confidence 46789999999999987555655555433 5999999999999864 46667653
No 435
>3e70_C DPA, signal recognition particle receptor; FTSY, SRP-GTPase, protein-targeting, transport protein; HET: GDP; 1.97A {Pyrococcus furiosus} PDB: 3dmd_B 3dm9_B*
Probab=23.59 E-value=1.1e+02 Score=30.71 Aligned_cols=39 Identities=26% Similarity=0.384 Sum_probs=33.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpy 42 (524)
..|.+.|- ||-||=.+++.|+.+++..|.+|.+.-.|.|
T Consensus 130 ~vi~lvG~--nGaGKTTll~~Lag~l~~~~g~V~l~g~D~~ 168 (328)
T 3e70_C 130 YVIMFVGF--NGSGKTTTIAKLANWLKNHGFSVVIAASDTF 168 (328)
T ss_dssp EEEEEECC--TTSSHHHHHHHHHHHHHHTTCCEEEEEECCS
T ss_pred eEEEEECC--CCCCHHHHHHHHHHHHHhcCCEEEEEeeccc
Confidence 35667776 9999999999999999999999998876654
No 436
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=23.57 E-value=43 Score=29.26 Aligned_cols=28 Identities=25% Similarity=0.292 Sum_probs=23.5
Q ss_pred chHHHHHHHHHHHHHCCCeeEEeeeccc
Q 009814 15 GKGVTASSIGVLLKACGLRVTCIKIDPY 42 (524)
Q Consensus 15 gkgi~~~s~g~ll~~~g~~v~~~k~dpy 42 (524)
|=|.+-.|.+..|..+|++|+++-=.|.
T Consensus 9 GaGpaGL~aA~~La~~G~~V~v~Ek~~~ 36 (336)
T 3kkj_A 9 GTGIAGLSAAQALTAAGHQVHLFDKSRG 36 (336)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CcCHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 4478888999999999999999876654
No 437
>2f6r_A COA synthase, bifunctional coenzyme A synthase; 18044849, bifunctional coenzyme A synthase (COA synthase), S genomics; HET: ACO UNL; 1.70A {Mus musculus}
Probab=23.55 E-value=51 Score=31.92 Aligned_cols=34 Identities=29% Similarity=0.341 Sum_probs=22.1
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY 42 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpy 42 (524)
++.|.|||+ ||-||..+|.-|. ..|+.| +-.|.+
T Consensus 75 ~~iI~I~G~--~GSGKSTva~~La----~lg~~~--id~D~~ 108 (281)
T 2f6r_A 75 LYVLGLTGI--SGSGKSSVAQRLK----NLGAYI--IDSDHL 108 (281)
T ss_dssp CEEEEEEEC--TTSCHHHHHHHHH----HHTCEE--EEHHHH
T ss_pred CEEEEEECC--CCCCHHHHHHHHH----HCCCcE--EehhHH
Confidence 467999997 5778876655544 457643 555554
No 438
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=23.50 E-value=62 Score=31.33 Aligned_cols=34 Identities=26% Similarity=0.463 Sum_probs=25.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dp 41 (524)
|-|+||||- |-+.+.|...|.++|++|..+-.+|
T Consensus 20 ~~vlVtGat------G~iG~~l~~~L~~~G~~V~~~~r~~ 53 (347)
T 4id9_A 20 HMILVTGSA------GRVGRAVVAALRTQGRTVRGFDLRP 53 (347)
T ss_dssp -CEEEETTT------SHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CEEEEECCC------ChHHHHHHHHHHhCCCEEEEEeCCC
Confidence 569999974 5566677788888999999875543
No 439
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=23.39 E-value=2.2e+02 Score=26.66 Aligned_cols=32 Identities=16% Similarity=0.435 Sum_probs=22.0
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEEh
Q 009814 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (524)
Q Consensus 361 ~~~DGIllpGGfG~rg~eg~i~air~are~~iP~LGIC 398 (524)
.++||||+.+...+. ..++.+.+.++|+.-+.
T Consensus 64 ~~vdGiIi~~~~~~~------~~~~~l~~~~iPvV~~~ 95 (294)
T 3qk7_A 64 RRVDALIVAHTQPED------FRLQYLQKQNFPFLALG 95 (294)
T ss_dssp TCCSEEEECSCCSSC------HHHHHHHHTTCCEEEES
T ss_pred CCCCEEEEeCCCCCh------HHHHHHHhCCCCEEEEC
Confidence 479999998743322 45666777889987553
No 440
>1uz5_A MOEA protein, 402AA long hypothetical molybdopterin biosynthesis MOEA protein; MOEA molybdopterin, MOCF biosynthesis; 2.05A {Pyrococcus horikoshii} SCOP: b.85.6.1 b.103.1.1 c.57.1.2
Probab=23.38 E-value=75 Score=33.00 Aligned_cols=45 Identities=22% Similarity=0.319 Sum_probs=31.6
Q ss_pred eEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCcc-ccccCcchHHHHHHHh
Q 009814 111 VQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGT-IGDIESMPFIEALGQF 166 (524)
Q Consensus 111 vqviphit~ei~~~i~~~~~~~~d~~~~~~d~~i~eiggt-vgdies~pf~ea~rq~ 166 (524)
..++|+=-++|++.|++... +.|++|+ .||| +|+-.=.| ||++++
T Consensus 226 ~~iv~Dd~~~i~~~l~~a~~--------~~DlVit-tGG~s~g~~D~t~--~al~~~ 271 (402)
T 1uz5_A 226 MGVARDDKESLKALIEKAVN--------VGDVVVI-SGGASGGTKDLTA--SVIEEL 271 (402)
T ss_dssp EEEECSSHHHHHHHHHHHHH--------HCSEEEE-ECCC-----CHHH--HHHHHH
T ss_pred EEEeCCCHHHHHHHHHHHhh--------CCCEEEE-cCCCCCCCcccHH--HHHHhh
Confidence 35778777899999998863 4799887 8887 67655455 899887
No 441
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=23.35 E-value=74 Score=30.67 Aligned_cols=28 Identities=43% Similarity=0.488 Sum_probs=19.8
Q ss_pred EEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 4 VLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 4 i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
|+||||- |-+.+.+.+.|.++|++|..+
T Consensus 3 vlVTGat------G~iG~~l~~~L~~~G~~V~~~ 30 (338)
T 1udb_A 3 VLVTGGS------GYIGSHTCVQLLQNGHDVIIL 30 (338)
T ss_dssp EEEETTT------SHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEECCC------CHHHHHHHHHHHHCCCEEEEE
Confidence 8999973 444455666677789988764
No 442
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=23.25 E-value=54 Score=32.23 Aligned_cols=37 Identities=22% Similarity=0.298 Sum_probs=28.2
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~d 40 (524)
||..|++.| +.|==.-+-.|++.|++||+.|+++=-.
T Consensus 23 MRIL~~~~p---~~GHv~P~l~LA~~L~~rGh~Vt~~t~~ 59 (400)
T 4amg_A 23 MRALFITSP---GLSHILPTVPLAQALRALGHEVRYATGG 59 (400)
T ss_dssp CEEEEECCS---SHHHHGGGHHHHHHHHHTTCEEEEEECS
T ss_pred CeEEEECCC---chhHHHHHHHHHHHHHHCCCEEEEEeCc
Confidence 788898877 3344344668899999999999997543
No 443
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=23.17 E-value=40 Score=31.78 Aligned_cols=33 Identities=21% Similarity=0.230 Sum_probs=24.5
Q ss_pred CE-EEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 1 MK-YVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 1 ~k-~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
|| -|+||||- |-+.+.+.+.|.++|++|..+--
T Consensus 4 M~m~ilVtGat------G~iG~~l~~~L~~~g~~V~~~~r 37 (287)
T 3sc6_A 4 MKERVIITGAN------GQLGKQLQEELNPEEYDIYPFDK 37 (287)
T ss_dssp -CEEEEEESTT------SHHHHHHHHHSCTTTEEEEEECT
T ss_pred ceeEEEEECCC------CHHHHHHHHHHHhCCCEEEEecc
Confidence 55 79999974 55666777788888999888744
No 444
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=23.12 E-value=89 Score=24.75 Aligned_cols=33 Identities=30% Similarity=0.390 Sum_probs=23.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCC-CeeEEeeecc
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACG-LRVTCIKIDP 41 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g-~~v~~~k~dp 41 (524)
+-|+|+|+ .++|. ++...|..+| ++|...-.+|
T Consensus 6 ~~v~I~G~--G~iG~-----~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGA--GKIGQ-----MIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECC--SHHHH-----HHHHHHHHCSSEEEEEEESCH
T ss_pred CeEEEECC--CHHHH-----HHHHHHHhCCCceEEEEeCCH
Confidence 56888886 55554 5566778889 8888765543
No 445
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=23.06 E-value=73 Score=29.43 Aligned_cols=31 Identities=29% Similarity=0.454 Sum_probs=22.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|.|+||||- +|||+. +.+.|.++|++|.+.-
T Consensus 14 k~vlItGas-ggiG~~-----la~~l~~~G~~V~~~~ 44 (260)
T 3awd_A 14 RVAIVTGGA-QNIGLA-----CVTALAEAGARVIIAD 44 (260)
T ss_dssp CEEEEETTT-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-chHHHH-----HHHHHHHCCCEEEEEe
Confidence 679999985 666654 4556777899887763
No 446
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=23.01 E-value=56 Score=28.67 Aligned_cols=60 Identities=18% Similarity=0.162 Sum_probs=33.4
Q ss_pred hHHHHHHHHHHhcccCCCCCCCCcEEEEeeCccccccCc-------chHHHHHHHhhhhcCCCCEEEEEeeeeee
Q 009814 118 TDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIES-------MPFIEALGQFSYRVGPGNFCLIHVSLVPV 185 (524)
Q Consensus 118 t~ei~~~i~~~~~~~~d~~~~~~d~~i~eiggtvgdies-------~pf~ea~rq~~~~~~~~n~~~ih~~~vp~ 185 (524)
|..+.+++.+... ..+||+|+|.+|. .|+-. .-|.+.+++|-..+...+.-.+-++..|.
T Consensus 59 ~~~~~~~~~~~~~------~~~pd~vvi~~G~--ND~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~vil~~~~p~ 125 (204)
T 3p94_A 59 TSEMLVRFRQDVI------NLKPKAVVILAGI--NDIAHNNGVIALENVFGNLVSMAELAKANHIKVIFCSVLPA 125 (204)
T ss_dssp HHHHHHHHHHHTG------GGCEEEEEEECCH--HHHTTTTSCCCHHHHHHHHHHHHHHHHHTTCEEEEECCCCC
T ss_pred HHHHHHHHHHHHH------hCCCCEEEEEeec--CccccccCCCCHHHHHHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 3455556654331 3469999999985 34432 34556666655444334454555555553
No 447
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}
Probab=22.80 E-value=41 Score=31.26 Aligned_cols=30 Identities=27% Similarity=0.364 Sum_probs=21.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|.++||||- +|||+.++- .|.. |.+|.++-
T Consensus 6 k~vlITGas-~gIG~~~a~-----~l~~-g~~v~~~~ 35 (245)
T 3e9n_A 6 KIAVVTGAT-GGMGIEIVK-----DLSR-DHIVYALG 35 (245)
T ss_dssp CEEEEESTT-SHHHHHHHH-----HHTT-TSEEEEEE
T ss_pred CEEEEEcCC-CHHHHHHHH-----HHhC-CCeEEEEe
Confidence 679999984 788876653 3433 88777653
No 448
>3trf_A Shikimate kinase, SK; amino acid biosynthesis, transferase; 2.60A {Coxiella burnetii}
Probab=22.65 E-value=63 Score=28.31 Aligned_cols=24 Identities=25% Similarity=0.336 Sum_probs=19.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHH
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLL 27 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll 27 (524)
+.|+++|. ||-||...|.-|+..|
T Consensus 6 ~~i~l~G~--~GsGKst~a~~La~~l 29 (185)
T 3trf_A 6 TNIYLIGL--MGAGKTSVGSQLAKLT 29 (185)
T ss_dssp CEEEEECS--TTSSHHHHHHHHHHHH
T ss_pred CEEEEECC--CCCCHHHHHHHHHHHh
Confidence 57899997 9999988877777655
No 449
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=22.39 E-value=1.2e+02 Score=29.79 Aligned_cols=59 Identities=22% Similarity=0.287 Sum_probs=39.0
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe--eecccccCC--CCC---CCccccceEEEccCC
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI--KIDPYLNTD--AGT---MSPFEHGEVFVLDDG 64 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~--k~dpyln~d--~gt---msp~~hgevfv~~dg 64 (524)
+.|-||| +=||=.|++=|+.+|+..|+++..+ .+-.-+|.. -|+ ..--+..+++|.+=+
T Consensus 109 ~~IaVTG----TnGKTTTt~ll~~iL~~~g~~~~~~~g~~~~n~~~~~~~~~p~~~~~~~~~~~~V~E~s 174 (326)
T 3eag_A 109 WVLGVAG----THGKTTTASMLAWVLEYAGLAPGFLIGGVPENFGVSARLPQTPRQDPNSQSPFFVIEAD 174 (326)
T ss_dssp EEEEEES----SSCHHHHHHHHHHHHHHTTCCCEEECSSEETTSSCSEECCCCCSSCTTSCCCEEEEECC
T ss_pred CEEEEEC----CCCHHHHHHHHHHHHHHcCCCceEEecceeccCCcceecCCccccccCCCCCEEEEEcc
Confidence 5788898 5699999999999999999998642 122222221 121 111246789999844
No 450
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=22.30 E-value=3.5e+02 Score=26.33 Aligned_cols=90 Identities=4% Similarity=-0.045 Sum_probs=50.5
Q ss_pred CCeEEEEEeccCCCcc---hHHHHHHHHHHcC-CceeEEeeeEEeeCCCccccccCCChhhhhHHHHhccCCCEEEECCC
Q 009814 296 EPVRIAMVGKYTGLSD---AYLSILKALLHAS-VDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGG 371 (524)
Q Consensus 296 ~~v~IaiVGkY~~~~d---ay~SI~~aL~~ag-~~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~l~~~DGIllpGG 371 (524)
++++|.+++.-.. .| +-..+.+.|+..| +.+.+.- +.+..+ +++.|+ +.|.++|.||+.-
T Consensus 3 ~~~kvLiv~G~~~-H~~~~~~~~l~~~l~~~g~f~V~~~~-----d~~~~~------d~~~f~---~~L~~~D~vV~~~- 66 (281)
T 4e5v_A 3 KPIKTLLITGQNN-HNWQVSHVVLKQILENSGRFDVDFVI-----SPEQGK------DMSGFV---LDFSPYQLVVLDY- 66 (281)
T ss_dssp CCEEEEEEESCCS-SCHHHHHHHHHHHHHHTTSEEEEEEE-----CCCTTS------CCTTCC---CCCTTCSEEEECC-
T ss_pred CceEEEEEcCCCC-CChHHHHHHHHHHHHhcCCEEEEEEe-----CCcccc------chhHHh---hhhhcCCEEEEeC-
Confidence 4577888765432 33 1234556777677 6666541 111000 011111 2478899999644
Q ss_pred CCCCchhHHHHHHHHHHHcCCCEEEEhHhH
Q 009814 372 FGNRGVQGKILAAKYAREHRIPYLGICLGM 401 (524)
Q Consensus 372 fG~rg~eg~i~air~are~~iP~LGICLGm 401 (524)
.++.-.....+++....+++.+++|+.-+.
T Consensus 67 ~~~~l~~~~~~~l~~yV~~Ggglv~~H~a~ 96 (281)
T 4e5v_A 67 NGDSWPEETNRRFLEYVQNGGGVVIYHAAD 96 (281)
T ss_dssp CSSCCCHHHHHHHHHHHHTTCEEEEEGGGG
T ss_pred CCCcCCHHHHHHHHHHHHcCCCEEEEeccc
Confidence 344322445667777777899999998653
No 451
>1w5r_A Arylamine N-acetyltransferase; acyltransferase; 1.45A {Mycobacterium smegmatis} SCOP: d.3.1.5 PDB: 1w6f_A* 1gx3_A
Probab=22.28 E-value=94 Score=30.45 Aligned_cols=53 Identities=19% Similarity=0.246 Sum_probs=39.9
Q ss_pred HHHHHHHHCCCeeEEeeecccccCCCCCC-CccccceEEEccCCcc----ccCCCCcc
Q 009814 22 SIGVLLKACGLRVTCIKIDPYLNTDAGTM-SPFEHGEVFVLDDGGE----VDLDLGNY 74 (524)
Q Consensus 22 s~g~ll~~~g~~v~~~k~dpyln~d~gtm-sp~~hgevfv~~dg~e----~dldlg~y 74 (524)
-++.+|++.||+|+.+.-=-|.+-+++.- .|..|==..|+-||.. +|.=+|.+
T Consensus 79 Lf~~~L~~LGF~V~~~~arV~~~~~~~~~~~~~~H~~l~V~idg~~~~ylvDVGFG~~ 136 (278)
T 1w5r_A 79 LLGYVLEELGFEVERLSGRVVWMRADDAPLPAQTHNVLSVAVPGADGRYLVDVGFGGQ 136 (278)
T ss_dssp HHHHHHHHHTCEEEEEEEEECTTCCTTCCCCCEEEEEEEEECSSCSCCEEECSCSCTT
T ss_pred HHHHHHHHcCCeEEEEEEEEeeCCCCCCCCCCCccEEEEEEECCeEEEEEEecCCCcc
Confidence 46789999999999987655655554432 5999999999999854 46666653
No 452
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=22.27 E-value=78 Score=30.20 Aligned_cols=34 Identities=21% Similarity=0.186 Sum_probs=25.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~d 40 (524)
+|=|+||||- |-+.+.|.+.|.++|++|..+--+
T Consensus 2 ~~~vlVtGat------G~iG~~l~~~L~~~g~~V~~~~r~ 35 (311)
T 3m2p_A 2 SLKIAVTGGT------GFLGQYVVESIKNDGNTPIILTRS 35 (311)
T ss_dssp CCEEEEETTT------SHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCC------cHHHHHHHHHHHhCCCEEEEEeCC
Confidence 3569999974 566677778888899988876544
No 453
>3d3q_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2; 2.70A {Staphylococcus epidermidis atcc 12228}
Probab=22.26 E-value=1.1e+02 Score=31.18 Aligned_cols=44 Identities=18% Similarity=0.199 Sum_probs=32.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeeccc---ccCCCCCCCc
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPY---LNTDAGTMSP 52 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpy---ln~d~gtmsp 52 (524)
+.|+|+|+ ||-||-..|..|...|. +.++-.|-| -..|-||-.|
T Consensus 8 ~lI~I~Gp--tgSGKTtla~~La~~l~-----~~iis~Ds~qvYr~~~i~Takp 54 (340)
T 3d3q_A 8 FLIVIVGP--TASGKTELSIEVAKKFN-----GEIISGDSMQVYQGMDIGTAKV 54 (340)
T ss_dssp EEEEEECS--TTSSHHHHHHHHHHHTT-----EEEEECCSSTTBTTCCTTTTCC
T ss_pred ceEEEECC--CcCcHHHHHHHHHHHcC-----CceeccccccccccccccccCC
Confidence 37889997 67789888877776543 678888884 6677777554
No 454
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=22.25 E-value=81 Score=33.28 Aligned_cols=57 Identities=19% Similarity=0.303 Sum_probs=37.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecccccCCCCCCCccccceEEEccCC
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDPYLNTDAGTMSPFEHGEVFVLDDG 64 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dpyln~d~gtmsp~~hgevfv~~dg 64 (524)
+.|-||| +=||-.|++=|+.+|+..|++++.+ +-..+| ..|+..-....+++|.+=|
T Consensus 123 ~~IaVTG----TnGKTTTt~ml~~iL~~~g~~~~~~-~gg~~~-~~g~~~~~~~~d~~VlE~~ 179 (494)
T 4hv4_A 123 HGIAVAG----THGKTTTTAMLSSIYAEAGLDPTFV-NGGLVK-AAGTHARLGSSRYLIAEAD 179 (494)
T ss_dssp EEEEEEC----SSSHHHHHHHHHHHHHHTTCCCEEE-EEEEET-TTTEEEECCSSSEEEEECC
T ss_pred CEEEEec----CCChHHHHHHHHHHHHhcCCCCEEE-ECCccc-ccccccccCCCcEEEEEcc
Confidence 4688888 5699999999999999999975422 111112 1232111234688888765
No 455
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=22.22 E-value=2.8e+02 Score=25.54 Aligned_cols=33 Identities=30% Similarity=0.413 Sum_probs=21.6
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 009814 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (524)
Q Consensus 361 ~~~DGIllpGGfG~rg~eg~i~air~are~~iP~LGI 397 (524)
.++|||++.+...+ .. ...++.+.+.++|+.-+
T Consensus 57 ~~vdgiI~~~~~~~-~~---~~~~~~~~~~~iPvV~~ 89 (290)
T 2fn9_A 57 AGYDAIIFNPTDAD-GS---IANVKRAKEAGIPVFCV 89 (290)
T ss_dssp TTCSEEEECCSCTT-TT---HHHHHHHHHTTCCEEEE
T ss_pred cCCCEEEEecCChH-HH---HHHHHHHHHCCCeEEEE
Confidence 57999999763221 11 23566677789998765
No 456
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=22.13 E-value=88 Score=30.28 Aligned_cols=34 Identities=38% Similarity=0.351 Sum_probs=24.5
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~d 40 (524)
||-|+||||- |-+.+.+.+.|.++|++|.++--+
T Consensus 21 ~~~vlVTGat------G~iG~~l~~~L~~~g~~V~~~~r~ 54 (333)
T 2q1w_A 21 MKKVFITGIC------GQIGSHIAELLLERGDKVVGIDNF 54 (333)
T ss_dssp CCEEEEETTT------SHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEeCCc------cHHHHHHHHHHHHCCCEEEEEECC
Confidence 4669999974 445566667777889999887443
No 457
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=22.12 E-value=86 Score=30.80 Aligned_cols=33 Identities=27% Similarity=0.280 Sum_probs=23.5
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~d 40 (524)
|-|+||||- |-+.+.+.+.|.++|++|..+-.+
T Consensus 25 ~~vlVtGat------G~iG~~l~~~L~~~g~~V~~~~r~ 57 (375)
T 1t2a_A 25 NVALITGIT------GQDGSYLAEFLLEKGYEVHGIVRR 57 (375)
T ss_dssp CEEEEETTT------SHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cEEEEECCC------chHHHHHHHHHHHCCCEEEEEECC
Confidence 679999974 444456666677789998876443
No 458
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=22.12 E-value=78 Score=31.68 Aligned_cols=38 Identities=21% Similarity=0.217 Sum_probs=30.9
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dp 41 (524)
||.+|+++| +.|==.-+-.|++.|+++|+.|+++--++
T Consensus 1 MrIl~~~~~---~~GH~~p~l~la~~L~~~Gh~V~~~~~~~ 38 (416)
T 1rrv_A 1 MRVLLSVCG---TRGDVEIGVALADRLKALGVQTRMCAPPA 38 (416)
T ss_dssp CEEEEEEES---CHHHHHHHHHHHHHHHHTTCEEEEEECGG
T ss_pred CeEEEEecC---CCccHHHHHHHHHHHHHCCCeEEEEeCHH
Confidence 788888887 45555667789999999999999986554
No 459
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=22.08 E-value=86 Score=29.04 Aligned_cols=46 Identities=26% Similarity=0.377 Sum_probs=0.0
Q ss_pred eEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCcc-ccccCcchHHHHHHHh
Q 009814 111 VQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGT-IGDIESMPFIEALGQF 166 (524)
Q Consensus 111 vqviphit~ei~~~i~~~~~~~~d~~~~~~d~~i~eiggt-vgdies~pf~ea~rq~ 166 (524)
..+||-=-++|++.|++.. ..++|++|+ .||| +|+--=.| ||++++
T Consensus 68 ~~iv~Dd~~~I~~al~~a~-------~~~~DlVIt-tGGts~g~~D~t~--eal~~l 114 (185)
T 3rfq_A 68 VVAVEADEVDIRNALNTAV-------IGGVDLVVS-VGGTGVTPRDVTP--ESTREI 114 (185)
T ss_dssp EEEECSCHHHHHHHHHHHH-------HTTCSEEEE-ESCCSSSTTCCHH--HHHHTT
T ss_pred EEEeCCCHHHHHHHHHHHH-------hCCCCEEEE-CCCCCCCCcccHH--HHHHHH
No 460
>1usg_A Leucine-specific binding protein; leucine-binding protein, X-RAY crystallography, protein structure, ABC transport systems, transport protein; 1.53A {Escherichia coli} SCOP: c.93.1.1 PDB: 1usi_A* 1usk_A 2lbp_A 1z15_A 1z16_A 1z17_A 1z18_A 2liv_A
Probab=21.89 E-value=3e+02 Score=25.95 Aligned_cols=33 Identities=9% Similarity=-0.019 Sum_probs=20.5
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEEh
Q 009814 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (524)
Q Consensus 361 ~~~DGIllpGGfG~rg~eg~i~air~are~~iP~LGIC 398 (524)
.++||||.|.+ . .....++..+.+.++|++.++
T Consensus 68 ~~v~~iig~~~---s--~~~~~~~~~~~~~~ip~v~~~ 100 (346)
T 1usg_A 68 DGIKYVIGHLC---S--SSTQPASDIYEDEGILMISPG 100 (346)
T ss_dssp TTCCEEECCSS---H--HHHHHHHHHHHHHTCEEEECC
T ss_pred CCCCEEEcCCC---c--HHHHHHHHHHHHCCCeEEeeC
Confidence 57999984332 1 122344566777899998764
No 461
>2xzm_B RPS0E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_B
Probab=21.85 E-value=1.3e+02 Score=29.12 Aligned_cols=77 Identities=16% Similarity=0.168 Sum_probs=46.3
Q ss_pred EEEEEeccCCCcchHHHHHHHHHHcCCceeEEeeeEEeeCCCccccccCCChhhhhHHHHhccCCCEEEECCCCCCCchh
Q 009814 299 RIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQ 378 (524)
Q Consensus 299 ~IaiVGkY~~~~day~SI~~aL~~ag~~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~l~~~DGIllpGGfG~rg~e 378 (524)
+|.+||-- ..+...|.+.-+..|+.... +-+|++. .|+.... .....||.|||.. | .
T Consensus 68 ~iLfVgtk---~~~~~~V~~~A~~~g~~yv~--~~RWlgG-~LTN~~t-----------~~~~~PdlliV~D-p---~-- 124 (241)
T 2xzm_B 68 DVMVVCSR---IYGQRAAIKFAGYTHCKSTS--SSRWTPG-TLTNYQT-----------LKYEEPRVLIVTD-P---R-- 124 (241)
T ss_dssp GEEEECCS---HHHHHHHHHHHHHHTCBCCC--CSSCCTT-TTTCTTC-----------TTCCCCSEEEESC-T---T--
T ss_pred eEEEEECC---HHHHHHHHHHHHHhCCEEec--cccccCC-cccCccc-----------cccCCCCEEEEEC-C---C--
Confidence 57788721 11334566665666665330 2357643 2332110 2346799999886 2 1
Q ss_pred HHHHHHHHHHHcCCCEEEEh
Q 009814 379 GKILAAKYAREHRIPYLGIC 398 (524)
Q Consensus 379 g~i~air~are~~iP~LGIC 398 (524)
....++++|..-+||+.|||
T Consensus 125 ~e~~ai~EA~~l~IPvIalv 144 (241)
T 2xzm_B 125 SDFQAIKEASYVNIPVIALC 144 (241)
T ss_dssp TTHHHHHHHTTTTCCEEECC
T ss_pred cchHHHHHHHHhCCCEEEEe
Confidence 23568999999999999998
No 462
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=21.79 E-value=3.6e+02 Score=25.80 Aligned_cols=31 Identities=19% Similarity=0.259 Sum_probs=21.1
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 009814 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (524)
Q Consensus 361 ~~~DGIllpGGfG~rg~eg~i~air~are~~iP~LGI 397 (524)
..+||||+.+...+ . ..++.+.+.++|+.-+
T Consensus 123 ~~vdGiIi~~~~~~---~---~~~~~l~~~~iPvV~i 153 (344)
T 3kjx_A 123 WRPSGVIIAGLEHS---E---AARAMLDAAGIPVVEI 153 (344)
T ss_dssp TCCSEEEEECSCCC---H---HHHHHHHHCSSCEEEE
T ss_pred CCCCEEEEECCCCC---H---HHHHHHHhCCCCEEEE
Confidence 47999998763221 1 3566677789998765
No 463
>1t0b_A THUA-like protein; trehalose metabolism, NCS symmetry, structural genomics, PSI, protein structure initiative; 1.70A {Geobacillus stearothermophilus} SCOP: c.23.16.6
Probab=21.70 E-value=1.9e+02 Score=27.83 Aligned_cols=88 Identities=13% Similarity=0.072 Sum_probs=50.8
Q ss_pred CeEEEEEeccCCCc--chH---------HHHHHHHHHcCCceeEEeeeEEeeCCCccccccCCChhhhhHHHHhccCCCE
Q 009814 297 PVRIAMVGKYTGLS--DAY---------LSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADG 365 (524)
Q Consensus 297 ~v~IaiVGkY~~~~--day---------~SI~~aL~~ag~~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~l~~~DG 365 (524)
.++|.+.++|..-. .+- ..+.++|+..|+++.+. ..++.+.. .+ .+.|+++|.
T Consensus 7 ~~~vlv~~~~~h~~~~~~v~~~~p~g~~~~i~~~L~~~gf~V~~~------t~dd~~~~---~~-------~~~L~~~Dv 70 (252)
T 1t0b_A 7 PIRVVVWNEFRHEKKDEQVRAIYPEGMHTVIASYLAEAGFDAATA------VLDEPEHG---LT-------DEVLDRCDV 70 (252)
T ss_dssp CCEEEEEECCCHHHHCHHHHHHCTTCHHHHHHHHHHHTTCEEEEE------ESSSGGGG---CC-------HHHHHTCSE
T ss_pred CcEEEEECCccccccchhhhccCchHHHHHHHHHHhhCCcEEEEE------eccCcccc---CC-------HhHHhcCCE
Confidence 46787877765100 011 12367788888766653 22222110 01 146889999
Q ss_pred EEECC-CCCCCchhHHHHHHHHHHHcCCCEEEEhHh
Q 009814 366 ILVPG-GFGNRGVQGKILAAKYAREHRIPYLGICLG 400 (524)
Q Consensus 366 IllpG-GfG~rg~eg~i~air~are~~iP~LGICLG 400 (524)
||+-| ..++.-.+...++++...+++.+++||=-|
T Consensus 71 vV~~~~~~~~~l~~~~~~al~~~V~~GgG~vgiH~a 106 (252)
T 1t0b_A 71 LVWWGHIAHDEVKDEVVERVHRRVLEGMGLIVLHSG 106 (252)
T ss_dssp EEEECSSCGGGSCHHHHHHHHHHHHTTCEEEEEGGG
T ss_pred EEEecCCCCCcCCHHHHHHHHHHHHcCCCEEEEccc
Confidence 98832 122222244567788888899999999655
No 464
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=21.67 E-value=83 Score=28.81 Aligned_cols=32 Identities=41% Similarity=0.612 Sum_probs=23.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
|.|+||||- +|||+.+ .+.|.++|++|.+.-.
T Consensus 8 k~vlITGas-ggiG~~~-----a~~l~~~G~~V~~~~r 39 (244)
T 3d3w_A 8 RRVLVTGAG-KGIGRGT-----VQALHATGARVVAVSR 39 (244)
T ss_dssp CEEEEESTT-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred cEEEEECCC-cHHHHHH-----HHHHHHCCCEEEEEeC
Confidence 789999984 6666654 4567778998877643
No 465
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=21.60 E-value=75 Score=29.35 Aligned_cols=31 Identities=39% Similarity=0.538 Sum_probs=23.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|.|+||||- +|||+. +.+.|.++|++|.+.-
T Consensus 15 k~vlVTGas-~gIG~~-----~a~~l~~~G~~V~~~~ 45 (249)
T 3f9i_A 15 KTSLITGAS-SGIGSA-----IARLLHKLGSKVIISG 45 (249)
T ss_dssp CEEEETTTT-SHHHHH-----HHHHHHHTTCEEEEEE
T ss_pred CEEEEECCC-ChHHHH-----HHHHHHHCCCEEEEEc
Confidence 779999994 677764 4567778899988753
No 466
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=21.53 E-value=2.6e+02 Score=25.34 Aligned_cols=32 Identities=13% Similarity=0.244 Sum_probs=20.8
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEE
Q 009814 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGI 397 (524)
Q Consensus 361 ~~~DGIllpGGfG~rg~eg~i~air~are~~iP~LGI 397 (524)
.++|||++.+.... . ...++.+.+.++|+.-+
T Consensus 57 ~~vdgiIi~~~~~~-~----~~~~~~~~~~~iPvV~~ 88 (272)
T 3o74_A 57 RRCDALFVASCLPP-E----DDSYRELQDKGLPVIAI 88 (272)
T ss_dssp TTCSEEEECCCCCS-S----CCHHHHHHHTTCCEEEE
T ss_pred cCCCEEEEecCccc-c----HHHHHHHHHcCCCEEEE
Confidence 57999999774321 1 12455667788998754
No 467
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=21.52 E-value=75 Score=30.70 Aligned_cols=30 Identities=37% Similarity=0.414 Sum_probs=22.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEe
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCI 37 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~ 37 (524)
|-|+||||- |-+.+.+.+.|.++|++|..+
T Consensus 3 ~~vlVtGat------G~iG~~l~~~L~~~g~~V~~~ 32 (348)
T 1ek6_A 3 EKVLVTGGA------GYIGSHTVLELLEAGYLPVVI 32 (348)
T ss_dssp SEEEEETTT------SHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEECCC------CHHHHHHHHHHHHCCCEEEEE
Confidence 579999974 445566667777789988775
No 468
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=21.47 E-value=55 Score=31.37 Aligned_cols=32 Identities=22% Similarity=0.325 Sum_probs=23.6
Q ss_pred EEEEEeCCc---------------cCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGV---------------VSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv---------------~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|-++||||- -+++|+ +|...|..+|++|+++-
T Consensus 9 k~vlVTgG~T~E~iDpVR~itN~SSg~iG~-----aiA~~~~~~Ga~V~l~~ 55 (226)
T 1u7z_A 9 LNIMITAGPTREPLDPVRYISDHSSGKMGF-----AIAAAAARRGANVTLVS 55 (226)
T ss_dssp CEEEEEESBCEEESSSSEEEEECCCSHHHH-----HHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCCCcccCceeeccCCCccHHHH-----HHHHHHHHCCCEEEEEE
Confidence 679999995 233554 45677888999999863
No 469
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=21.42 E-value=80 Score=28.78 Aligned_cols=32 Identities=38% Similarity=0.534 Sum_probs=23.2
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
|.|+||||- +|||+. +.+.|.++|++|.+.-.
T Consensus 6 k~vlVtGas-ggiG~~-----~a~~l~~~G~~V~~~~r 37 (234)
T 2ehd_A 6 GAVLITGAS-RGIGEA-----TARLLHAKGYRVGLMAR 37 (234)
T ss_dssp CEEEESSTT-SHHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-cHHHHH-----HHHHHHHCCCEEEEEEC
Confidence 679999985 677754 44566778998877543
No 470
>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}
Probab=21.19 E-value=45 Score=36.31 Aligned_cols=31 Identities=29% Similarity=0.513 Sum_probs=23.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|.++||||- ||||+. +.+.|-++|.+|.+.-
T Consensus 20 k~~lVTGas-~GIG~a-----iA~~La~~Ga~Vv~~~ 50 (613)
T 3oml_A 20 RVAVVTGAG-AGLGRE-----YALLFAERGAKVVVND 50 (613)
T ss_dssp CEEEETTTT-SHHHHH-----HHHHHHHTTCEEEEC-
T ss_pred CEEEEeCCC-cHHHHH-----HHHHHHHCCCEEEEEe
Confidence 679999996 788875 4566778899998753
No 471
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=21.16 E-value=83 Score=29.92 Aligned_cols=31 Identities=35% Similarity=0.279 Sum_probs=22.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIK 38 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k 38 (524)
|-|+||||- |-+.+.+-+.|.++|++|...-
T Consensus 2 k~vlVTGat------G~iG~~l~~~L~~~G~~V~~~~ 32 (322)
T 2p4h_X 2 GRVCVTGGT------GFLGSWIIKSLLENGYSVNTTI 32 (322)
T ss_dssp CEEEEESTT------SHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECCh------hHHHHHHHHHHHHCCCEEEEEE
Confidence 569999974 4444556666778899988653
No 472
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=21.13 E-value=90 Score=30.73 Aligned_cols=33 Identities=27% Similarity=0.281 Sum_probs=23.4
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~d 40 (524)
|-|+||||- |-+.+.|.+.|.++|++|..+--+
T Consensus 29 k~vlVtGat------G~IG~~l~~~L~~~g~~V~~~~r~ 61 (381)
T 1n7h_A 29 KIALITGIT------GQDGSYLTEFLLGKGYEVHGLIRR 61 (381)
T ss_dssp CEEEEETTT------SHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CeEEEEcCC------chHHHHHHHHHHHCCCEEEEEecC
Confidence 679999973 344455666677789998876443
No 473
>2qgz_A Helicase loader, putative primosome component; structural genomics, PSI-2, protein structure initiative; 2.40A {Streptococcus pyogenes serotype M3}
Probab=21.12 E-value=67 Score=31.59 Aligned_cols=61 Identities=21% Similarity=0.357 Sum_probs=42.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHH-HCCCeeEEeeeccccc-----CCCCC----CCccccceEEEccCC
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLK-ACGLRVTCIKIDPYLN-----TDAGT----MSPFEHGEVFVLDDG 64 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~-~~g~~v~~~k~dpyln-----~d~gt----msp~~hgevfv~~dg 64 (524)
+-++++|. +|.||=-.|.+|+..+. .+|++|..+-..-+++ .+.|. +.-+..-.|.+.||=
T Consensus 153 ~~lll~G~--~GtGKT~La~aia~~~~~~~g~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~lLiiDdi 223 (308)
T 2qgz_A 153 KGLYLYGD--MGIGKSYLLAAMAHELSEKKGVSTTLLHFPSFAIDVKNAISNGSVKEEIDAVKNVPVLILDDI 223 (308)
T ss_dssp CEEEEECS--TTSSHHHHHHHHHHHHHHHSCCCEEEEEHHHHHHHHHCCCC----CCTTHHHHTSSEEEEETC
T ss_pred ceEEEECC--CCCCHHHHHHHHHHHHHHhcCCcEEEEEHHHHHHHHHHHhccchHHHHHHHhcCCCEEEEcCC
Confidence 45788997 79999999999999999 9999998776654433 22332 222334467777763
No 474
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=21.09 E-value=85 Score=30.48 Aligned_cols=33 Identities=27% Similarity=0.289 Sum_probs=20.8
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHC-CCeeEEeeec
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKAC-GLRVTCIKID 40 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~-g~~v~~~k~d 40 (524)
|| |+||||- ++||. .|.+.|.++ |++|..+-.+
T Consensus 1 Mk-vlVTGas-G~iG~-----~l~~~L~~~~g~~V~~~~r~ 34 (361)
T 1kew_A 1 MK-ILITGGA-GFIGS-----AVVRHIIKNTQDTVVNIDKL 34 (361)
T ss_dssp CE-EEEESTT-SHHHH-----HHHHHHHHHCSCEEEEEECC
T ss_pred CE-EEEECCC-chHhH-----HHHHHHHhcCCCeEEEEecC
Confidence 67 8999984 44444 444444445 7888876443
No 475
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=21.01 E-value=93 Score=30.26 Aligned_cols=33 Identities=24% Similarity=0.185 Sum_probs=23.3
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
+|-|+||||- |-+.+.+.+.|.++|++|..+-.
T Consensus 27 ~~~vlVtGat------G~iG~~l~~~L~~~g~~V~~~~r 59 (352)
T 1sb8_A 27 PKVWLITGVA------GFIGSNLLETLLKLDQKVVGLDN 59 (352)
T ss_dssp CCEEEEETTT------SHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCeEEEECCC------cHHHHHHHHHHHHCCCEEEEEeC
Confidence 3569999973 44455666677788998887644
No 476
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=20.99 E-value=96 Score=30.01 Aligned_cols=33 Identities=24% Similarity=0.097 Sum_probs=25.6
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~d 40 (524)
|-|+||||- |-+.+.|.+.|.++|++|..+-.+
T Consensus 26 ~~vlVtGat------G~iG~~l~~~L~~~g~~V~~~~r~ 58 (351)
T 3ruf_A 26 KTWLITGVA------GFIGSNLLEKLLKLNQVVIGLDNF 58 (351)
T ss_dssp CEEEEETTT------SHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CeEEEECCC------cHHHHHHHHHHHHCCCEEEEEeCC
Confidence 679999974 566677778888899998887543
No 477
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=20.97 E-value=4.1e+02 Score=27.72 Aligned_cols=81 Identities=19% Similarity=0.153 Sum_probs=44.4
Q ss_pred eEEEEEeccCCCcchHHH-HHHHHHHcCCceeEEeeeEEeeCCC------ccccccCCChhhhhHHHHhccCCCEEEECC
Q 009814 298 VRIAMVGKYTGLSDAYLS-ILKALLHASVDLRKKLVIDWIPACD------LEDATEKENPDAYKAAWKLLKGADGILVPG 370 (524)
Q Consensus 298 v~IaiVGkY~~~~day~S-I~~aL~~ag~~~~v~v~i~~i~s~~------le~~~~~~~p~~y~~~~~~l~~~DGIllpG 370 (524)
.+|.++| .+ .+=.| +.+.|...|+.+.+. |... ++...+... ..++ .+.+.++|-||++.
T Consensus 23 ~~v~viG-iG---~sG~s~~A~~l~~~G~~V~~~------D~~~~~~~~~l~~~gi~~~-~g~~--~~~~~~~d~vV~Sp 89 (494)
T 4hv4_A 23 RHIHFVG-IG---GAGMGGIAEVLANEGYQISGS------DLAPNSVTQHLTALGAQIY-FHHR--PENVLDASVVVVST 89 (494)
T ss_dssp CEEEEET-TT---STTHHHHHHHHHHTTCEEEEE------CSSCCHHHHHHHHTTCEEE-SSCC--GGGGTTCSEEEECT
T ss_pred CEEEEEE-Ec---HhhHHHHHHHHHhCCCeEEEE------ECCCCHHHHHHHHCCCEEE-CCCC--HHHcCCCCEEEECC
Confidence 4788887 44 34465 788899999888765 3221 111000000 0000 02456799999998
Q ss_pred CCCCCchhHHHHHHHHHHHcCCCEEE
Q 009814 371 GFGNRGVQGKILAAKYAREHRIPYLG 396 (524)
Q Consensus 371 GfG~rg~eg~i~air~are~~iP~LG 396 (524)
|..... ..++.|+++++|+++
T Consensus 90 gi~~~~-----p~~~~a~~~gi~v~~ 110 (494)
T 4hv4_A 90 AISADN-----PEIVAAREARIPVIR 110 (494)
T ss_dssp TSCTTC-----HHHHHHHHTTCCEEE
T ss_pred CCCCCC-----HHHHHHHHCCCCEEc
Confidence 754321 234556666677655
No 478
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=20.94 E-value=48 Score=31.13 Aligned_cols=29 Identities=34% Similarity=0.408 Sum_probs=19.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHC--CCeeEE
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKAC--GLRVTC 36 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~--g~~v~~ 36 (524)
|-++||||- +|||+.++ +.|-++ |.+|..
T Consensus 3 k~~lVTGas-~GIG~aia-----~~l~~~g~~~~v~~ 33 (254)
T 3kzv_A 3 KVILVTGVS-RGIGKSIV-----DVLFSLDKDTVVYG 33 (254)
T ss_dssp CEEEECSTT-SHHHHHHH-----HHHHHHCSSCEEEE
T ss_pred CEEEEECCC-chHHHHHH-----HHHHhcCCCeEEEE
Confidence 889999986 78887664 444444 355543
No 479
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=20.83 E-value=85 Score=27.76 Aligned_cols=47 Identities=17% Similarity=0.169 Sum_probs=25.4
Q ss_pred CCCCcEEEEeeCccccccCcc--hHHHHHHHhhhh---cCCCCEEEEEeeeeeee
Q 009814 137 EGPVDVCVIELGGTIGDIESM--PFIEALGQFSYR---VGPGNFCLIHVSLVPVL 186 (524)
Q Consensus 137 ~~~~d~~i~eiggtvgdies~--pf~ea~rq~~~~---~~~~n~~~ih~~~vp~~ 186 (524)
..+||+|++.+|.- |+-.. -|.+.+++|-.. .+++ .-.|-++..|..
T Consensus 72 ~~~pd~Vvi~~G~N--D~~~~~~~~~~~l~~ii~~l~~~~p~-~~ii~~~~~P~~ 123 (200)
T 4h08_A 72 NTKFDVIHFNNGLH--GFDYTEEEYDKSFPKLIKIIRKYAPK-AKLIWANTTPVR 123 (200)
T ss_dssp HSCCSEEEECCCSS--CTTSCHHHHHHHHHHHHHHHHHHCTT-CEEEEECCCCCE
T ss_pred cCCCCeEEEEeeeC--CCCCCHHHHHHHHHHHHHHHhhhCCC-ccEEEeccCCCc
Confidence 35799999999964 65322 245555554332 2332 334444444543
No 480
>1qf9_A UMP/CMP kinase, protein (uridylmonophosphate/cytidylmonophosphate kinase); nucleoside monophosphate kinase, NMP kinase; HET: ADP C5P; 1.70A {Dictyostelium discoideum} SCOP: c.37.1.1 PDB: 1uke_A* 2ukd_A* 3ukd_A* 4ukd_A* 5ukd_A*
Probab=20.70 E-value=73 Score=27.72 Aligned_cols=25 Identities=36% Similarity=0.514 Sum_probs=18.7
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHH
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLL 27 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll 27 (524)
++.|+++|+ +|-||...|..|...|
T Consensus 6 ~~~I~l~G~--~GsGKsT~~~~L~~~l 30 (194)
T 1qf9_A 6 PNVVFVLGG--PGSGKGTQCANIVRDF 30 (194)
T ss_dssp CEEEEEEES--TTSSHHHHHHHHHHHH
T ss_pred CcEEEEECC--CCCCHHHHHHHHHHHh
Confidence 368999997 6889988776665543
No 481
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=20.58 E-value=90 Score=29.52 Aligned_cols=33 Identities=30% Similarity=0.426 Sum_probs=25.3
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeec
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKID 40 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~d 40 (524)
|-|+||||- |-+.+.|.+.|.++|++|..+--+
T Consensus 8 ~~vlVtGat------G~iG~~l~~~L~~~g~~V~~~~r~ 40 (321)
T 3vps_A 8 HRILITGGA------GFIGGHLARALVASGEEVTVLDDL 40 (321)
T ss_dssp CEEEEETTT------SHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CeEEEECCC------ChHHHHHHHHHHHCCCEEEEEecC
Confidence 569999974 556667777888889999887443
No 482
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=20.48 E-value=88 Score=30.31 Aligned_cols=33 Identities=33% Similarity=0.426 Sum_probs=24.6
Q ss_pred CEEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 1 ~k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
+|-|+||||- |-+.+.|.+.|.++|++|..+-.
T Consensus 27 ~~~vlVtGat------G~iG~~l~~~L~~~g~~V~~~~r 59 (343)
T 2b69_A 27 RKRILITGGA------GFVGSHLTDKLMMDGHEVTVVDN 59 (343)
T ss_dssp CCEEEEETTT------SHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEEcCc------cHHHHHHHHHHHHCCCEEEEEeC
Confidence 3569999973 55666777778888999988643
No 483
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=20.39 E-value=88 Score=29.52 Aligned_cols=32 Identities=34% Similarity=0.485 Sum_probs=23.1
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
|.++||||- +|||+.+ .+.|.++|++|.+.-.
T Consensus 33 k~vlVTGas-ggIG~~l-----a~~l~~~G~~V~~~~r 64 (279)
T 1xg5_A 33 RLALVTGAS-GGIGAAV-----ARALVQQGLKVVGCAR 64 (279)
T ss_dssp CEEEEESTT-SHHHHHH-----HHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-chHHHHH-----HHHHHHCCCEEEEEEC
Confidence 689999985 6777654 4556678999877543
No 484
>3j20_B 30S ribosomal protein S2P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=20.32 E-value=1.5e+02 Score=28.00 Aligned_cols=76 Identities=16% Similarity=0.089 Sum_probs=47.9
Q ss_pred EEEEEeccCCCcchHHHHHHHHHHcCCceeEEeeeEEeeCCCccccccCCChhhhhHHHHhccCCCEEEECCCCCCCchh
Q 009814 299 RIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQ 378 (524)
Q Consensus 299 ~IaiVGkY~~~~day~SI~~aL~~ag~~~~v~v~i~~i~s~~le~~~~~~~p~~y~~~~~~l~~~DGIllpGGfG~rg~e 378 (524)
+|.+||--. .+...|.+.-+..|+... +=.|++. .++.... +....||.+|+.. |.
T Consensus 66 ~ilfV~tk~---~~~~~V~k~A~~~g~~~v---~~rw~gG-~lTN~~~-----------~~~~~Pdllvv~D----p~-- 121 (202)
T 3j20_B 66 SILAVSVRL---YGQKPVKKFGEVTGARAI---PGRFLPG-TMTNPAV-----------KNFFEPDVLIVTD----PR-- 121 (202)
T ss_dssp CEEEECCCT---TTHHHHHHHHHHHSCCCC---CSSCCSS-SSSCSSS-----------SSCCCCSEEEESC----TT--
T ss_pred eEEEEecCh---HHHHHHHHHHHHHCCcee---CceecCC-CcccHhH-----------HhccCCCeEEEeC----Cc--
Confidence 577887322 245666666666676543 2367653 3332111 1245799999985 22
Q ss_pred HHHHHHHHHHHcCCCEEEEh
Q 009814 379 GKILAAKYAREHRIPYLGIC 398 (524)
Q Consensus 379 g~i~air~are~~iP~LGIC 398 (524)
....++++|..-+||+.|+|
T Consensus 122 ~d~~ai~EA~~l~IP~Ial~ 141 (202)
T 3j20_B 122 ADHQAMREAVEIGIPIVALV 141 (202)
T ss_dssp TSHHHHHHHHHHTCCEEEEE
T ss_pred cchHHHHHHHHcCCCEEEEE
Confidence 23578899999999999998
No 485
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=20.30 E-value=4e+02 Score=24.63 Aligned_cols=32 Identities=22% Similarity=0.255 Sum_probs=21.0
Q ss_pred cCCCEEEECCCCCCCchhHHHHHHHHHHHcCCCEEEEh
Q 009814 361 KGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 398 (524)
Q Consensus 361 ~~~DGIllpGGfG~rg~eg~i~air~are~~iP~LGIC 398 (524)
.++|||++.+.... . ..++.+.+.++|+.-+.
T Consensus 71 ~~vdgiIi~~~~~~---~---~~~~~l~~~~iPvV~~~ 102 (289)
T 2fep_A 71 KQVDGIVFMGGNIT---D---EHVAEFKRSPVPIVLAA 102 (289)
T ss_dssp TTCSEEEECCSCCC---H---HHHHHHHHSSSCEEEES
T ss_pred CCCCEEEEecCCCC---H---HHHHHHHhcCCCEEEEc
Confidence 57999998764221 1 24555667789987664
No 486
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=20.13 E-value=83 Score=29.94 Aligned_cols=32 Identities=19% Similarity=0.269 Sum_probs=23.7
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeee
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKI 39 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~ 39 (524)
|-|+||||- |-+.+.+.+.|.++|++|..+-.
T Consensus 3 ~~vlVtGat------G~iG~~l~~~L~~~g~~V~~~~r 34 (315)
T 2ydy_A 3 RRVLVTGAT------GLLGRAVHKEFQQNNWHAVGCGF 34 (315)
T ss_dssp CEEEEETTT------SHHHHHHHHHHHTTTCEEEEEC-
T ss_pred CeEEEECCC------cHHHHHHHHHHHhCCCeEEEEcc
Confidence 569999974 55556677778888999987643
No 487
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=20.13 E-value=1e+02 Score=29.20 Aligned_cols=40 Identities=25% Similarity=0.295 Sum_probs=27.9
Q ss_pred cCCCEEEECCCCCCC-chhHHHHHHH-HHHHcCCCEEEEhHh
Q 009814 361 KGADGILVPGGFGNR-GVQGKILAAK-YAREHRIPYLGICLG 400 (524)
Q Consensus 361 ~~~DGIllpGGfG~r-g~eg~i~air-~are~~iP~LGICLG 400 (524)
.+.|+|.++-|||.- |+.=-+..+| .+...++|+.||+--
T Consensus 54 ~did~Iav~~GPGsftglRig~~~ak~la~~~~~Pl~~V~~l 95 (231)
T 2gel_A 54 NEIDALAFGRGPGSFTGVRIGIGIAQGLALGANLPMIGVSTL 95 (231)
T ss_dssp GGCSEEEEECCSSCHHHHHHHHHHHHHHHHTTTCCEEEECHH
T ss_pred HHCCEEEEEcCCChhHhHHHHHHHHHHHHHHcCCCEEEeccH
Confidence 457999999999984 5542233333 345678999999953
No 488
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=20.09 E-value=1e+02 Score=28.05 Aligned_cols=34 Identities=21% Similarity=0.173 Sum_probs=23.9
Q ss_pred EEEEEeCCccCCcchHHHHHHHHHHHHHCCCeeEEeeecc
Q 009814 2 KYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTCIKIDP 41 (524)
Q Consensus 2 k~i~vtggv~s~lgkgi~~~s~g~ll~~~g~~v~~~k~dp 41 (524)
|-|+||||- ++||+ .+.+.|.++|++|..+-.+|
T Consensus 22 ~~ilVtGat-G~iG~-----~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 22 MRVLVVGAN-GKVAR-----YLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp CEEEEETTT-SHHHH-----HHHHHHHHTTCEEEEEESSG
T ss_pred CeEEEECCC-ChHHH-----HHHHHHHhCCCeEEEEECCh
Confidence 458999974 44554 55566777899999886543
Done!