Query 009816
Match_columns 524
No_of_seqs 449 out of 2024
Neff 10.7
Searched_HMMs 46136
Date Thu Mar 28 17:40:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009816.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009816hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2271 UhpC Sugar phosphate p 100.0 3.4E-46 7.3E-51 343.4 31.3 412 28-500 19-438 (448)
2 PRK09556 uhpT sugar phosphate 100.0 2.4E-40 5.2E-45 333.6 36.2 414 30-500 21-453 (467)
3 COG2814 AraJ Arabinose efflux 100.0 4.1E-39 8.8E-44 301.8 35.2 375 34-495 9-385 (394)
4 PRK11663 regulatory protein Uh 100.0 1.1E-38 2.4E-43 318.4 35.8 398 33-493 18-421 (434)
5 TIGR02332 HpaX 4-hydroxyphenyl 100.0 1.6E-38 3.4E-43 314.7 29.8 396 33-485 3-410 (412)
6 PRK03545 putative arabinose tr 100.0 7E-37 1.5E-41 301.9 37.4 339 98-495 39-379 (390)
7 TIGR00894 2A0114euk Na(+)-depe 100.0 3E-37 6.4E-42 311.7 31.3 421 32-493 13-447 (465)
8 PRK11273 glpT sn-glycerol-3-ph 100.0 2E-36 4.3E-41 303.8 35.4 411 32-502 23-441 (452)
9 PRK11551 putative 3-hydroxyphe 100.0 3.8E-36 8.2E-41 298.8 33.5 378 34-491 11-391 (406)
10 PRK10642 proline/glycine betai 100.0 5.8E-36 1.3E-40 303.2 33.4 389 37-492 15-426 (490)
11 PRK15034 nitrate/nitrite trans 100.0 2.3E-35 4.9E-40 287.1 34.3 390 32-497 28-455 (462)
12 PRK14995 methyl viologen resis 100.0 6.5E-36 1.4E-40 303.1 31.9 382 35-472 3-413 (495)
13 TIGR00892 2A0113 monocarboxyla 100.0 1.4E-35 3.1E-40 297.0 34.0 395 32-490 13-415 (455)
14 PRK10406 alpha-ketoglutarate t 100.0 1.7E-35 3.7E-40 295.5 34.4 380 34-493 18-421 (432)
15 PLN00028 nitrate transmembrane 100.0 1.7E-35 3.6E-40 298.1 34.0 386 32-496 30-433 (476)
16 TIGR01299 synapt_SV2 synaptic 100.0 3.8E-36 8.3E-41 309.6 28.5 414 33-502 162-738 (742)
17 TIGR00893 2A0114 d-galactonate 100.0 1.4E-35 3.1E-40 293.9 30.5 388 46-493 2-396 (399)
18 PRK03699 putative transporter; 100.0 9.2E-35 2E-39 286.9 35.2 378 34-499 3-383 (394)
19 PRK10213 nepI ribonucleoside t 100.0 2.9E-34 6.2E-39 282.5 38.0 365 34-488 16-383 (394)
20 PRK09705 cynX putative cyanate 100.0 7.7E-35 1.7E-39 286.9 33.1 355 55-501 26-385 (393)
21 TIGR00890 2A0111 Oxalate/Forma 100.0 2.5E-35 5.5E-40 290.1 29.4 368 40-488 5-374 (377)
22 PRK12307 putative sialic acid 100.0 7.1E-35 1.5E-39 291.6 32.0 375 34-481 14-393 (426)
23 TIGR00903 2A0129 major facilit 100.0 7E-35 1.5E-39 282.5 29.6 354 50-492 3-361 (368)
24 TIGR00712 glpT glycerol-3-phos 100.0 3.4E-34 7.5E-39 286.6 35.0 406 32-495 21-432 (438)
25 COG2223 NarK Nitrate/nitrite t 100.0 1.8E-34 3.8E-39 266.9 30.0 387 32-499 8-404 (417)
26 PRK10091 MFS transport protein 100.0 7E-34 1.5E-38 279.4 34.6 366 42-495 7-375 (382)
27 TIGR00891 2A0112 putative sial 100.0 1E-34 2.2E-39 288.7 28.5 388 32-480 6-400 (405)
28 TIGR00881 2A0104 phosphoglycer 100.0 1.8E-34 4E-39 284.1 28.7 372 45-477 2-378 (379)
29 PRK15402 multidrug efflux syst 100.0 2.1E-33 4.7E-38 278.7 35.8 360 33-472 8-370 (406)
30 PRK09952 shikimate transporter 100.0 2E-33 4.3E-38 280.6 35.3 383 35-493 19-430 (438)
31 TIGR00887 2A0109 phosphate:H+ 100.0 2.2E-34 4.8E-39 292.8 27.0 429 31-507 9-498 (502)
32 PRK10504 putative transporter; 100.0 1.9E-33 4.2E-38 284.7 33.7 376 40-472 12-415 (471)
33 KOG2532 Permease of the major 100.0 3.4E-34 7.4E-39 280.9 26.2 365 98-496 68-447 (466)
34 KOG2533 Permease of the major 100.0 1.2E-33 2.5E-38 277.5 28.4 394 32-486 39-446 (495)
35 PRK03893 putative sialic acid 100.0 1.8E-33 3.9E-38 287.1 30.8 393 33-489 15-446 (496)
36 PRK15075 citrate-proton sympor 100.0 3.5E-33 7.5E-38 279.1 31.9 359 35-474 12-397 (434)
37 PRK15403 multidrug efflux syst 100.0 1.9E-32 4E-37 271.2 36.4 365 43-487 21-388 (413)
38 TIGR00711 efflux_EmrB drug res 100.0 1.7E-33 3.6E-38 286.7 29.2 380 38-472 2-410 (485)
39 PRK10077 xylE D-xylose transpo 100.0 7.9E-34 1.7E-38 288.5 26.3 424 34-506 8-466 (479)
40 TIGR00710 efflux_Bcr_CflA drug 100.0 4.3E-32 9.4E-37 267.9 36.2 345 47-472 14-361 (385)
41 PRK05122 major facilitator sup 100.0 4E-32 8.7E-37 269.1 34.8 363 41-493 18-386 (399)
42 TIGR00879 SP MFS transporter, 100.0 1.1E-33 2.5E-38 287.7 23.0 411 37-493 27-467 (481)
43 PRK11195 lysophospholipid tran 100.0 6.7E-32 1.4E-36 265.7 34.5 347 110-501 38-385 (393)
44 PF07690 MFS_1: Major Facilita 100.0 4E-33 8.6E-38 271.8 25.2 347 44-463 2-352 (352)
45 PRK10133 L-fucose transporter; 100.0 5.2E-32 1.1E-36 269.3 32.9 368 33-485 21-422 (438)
46 TIGR00900 2A0121 H+ Antiporter 100.0 1.7E-32 3.7E-37 268.7 28.9 328 110-472 34-363 (365)
47 TIGR00898 2A0119 cation transp 100.0 4E-33 8.7E-38 284.9 25.0 366 110-503 127-500 (505)
48 TIGR00899 2A0120 sugar efflux 100.0 1.3E-31 2.7E-36 263.6 34.5 339 98-493 28-371 (375)
49 PRK10489 enterobactin exporter 100.0 1.3E-32 2.9E-37 274.0 27.4 354 110-505 52-407 (417)
50 TIGR00895 2A0115 benzoate tran 100.0 4E-32 8.7E-37 269.4 29.2 379 33-469 12-397 (398)
51 TIGR00897 2A0118 polyol permea 100.0 2.9E-31 6.3E-36 262.6 34.9 349 98-495 43-400 (402)
52 PRK03633 putative MFS family t 100.0 1.6E-31 3.4E-36 262.8 32.6 356 40-488 8-364 (381)
53 PRK09874 drug efflux system pr 100.0 4.1E-31 9E-36 263.0 35.5 335 111-493 55-395 (408)
54 PRK12382 putative transporter; 100.0 4.5E-31 9.7E-36 260.9 34.5 336 98-493 46-386 (392)
55 PRK11043 putative transporter; 100.0 6.8E-31 1.5E-35 260.5 35.7 319 98-472 36-357 (401)
56 KOG1330 Sugar transporter/spin 100.0 1.3E-33 2.9E-38 262.8 14.9 376 31-475 26-417 (493)
57 PRK11652 emrD multidrug resist 100.0 8.4E-31 1.8E-35 259.2 35.7 354 36-472 6-360 (394)
58 PRK11646 multidrug resistance 100.0 9.4E-31 2E-35 258.2 34.2 335 98-489 41-381 (400)
59 KOG2504 Monocarboxylate transp 100.0 6.3E-31 1.4E-35 261.3 29.7 406 32-496 40-476 (509)
60 PRK11102 bicyclomycin/multidru 100.0 1.9E-30 4E-35 255.4 32.8 321 98-467 21-344 (377)
61 PRK10473 multidrug efflux syst 100.0 3.7E-30 7.9E-35 254.4 35.0 255 98-395 33-288 (392)
62 TIGR00886 2A0108 nitrite extru 100.0 5.9E-31 1.3E-35 257.9 28.3 348 41-459 4-366 (366)
63 PRK11010 ampG muropeptide tran 100.0 7.8E-30 1.7E-34 257.3 36.2 345 110-495 47-402 (491)
64 TIGR00883 2A0106 metabolite-pr 100.0 2E-30 4.4E-35 256.8 27.7 323 120-485 45-390 (394)
65 PRK10054 putative transporter; 100.0 5.6E-30 1.2E-34 252.2 30.0 339 98-489 38-377 (395)
66 cd06174 MFS The Major Facilita 100.0 9.9E-30 2.2E-34 247.7 30.6 342 43-492 4-348 (352)
67 PRK15011 sugar efflux transpor 100.0 7.8E-29 1.7E-33 244.5 36.7 336 98-493 46-388 (393)
68 TIGR00885 fucP L-fucose:H+ sym 100.0 2.6E-29 5.6E-34 247.8 33.2 362 40-484 5-400 (410)
69 TIGR00902 2A0127 phenyl propri 100.0 9.1E-29 2E-33 243.0 35.6 357 43-489 9-372 (382)
70 KOG0569 Permease of the major 100.0 1.6E-29 3.4E-34 244.7 26.9 381 110-508 60-465 (485)
71 KOG3764 Vesicular amine transp 100.0 1.6E-30 3.4E-35 236.9 17.9 353 104-497 100-455 (464)
72 PF05977 MFS_3: Transmembrane 100.0 9.4E-29 2E-33 247.0 31.3 347 108-493 43-391 (524)
73 TIGR00896 CynX cyanate transpo 100.0 5.4E-29 1.2E-33 242.6 27.2 315 98-472 30-348 (355)
74 PRK06814 acylglycerophosphoeth 100.0 1.8E-28 3.9E-33 274.0 34.8 341 110-489 52-415 (1140)
75 PRK09528 lacY galactoside perm 100.0 1.3E-28 2.7E-33 245.5 29.7 356 98-494 41-401 (420)
76 PRK11128 putative 3-phenylprop 100.0 3.4E-27 7.5E-32 232.0 36.0 331 98-488 34-371 (382)
77 PRK11902 ampG muropeptide tran 100.0 3.6E-27 7.8E-32 233.5 36.2 343 98-492 29-386 (402)
78 TIGR00889 2A0110 nucleoside tr 100.0 2.6E-27 5.5E-32 234.6 34.6 343 98-496 33-402 (418)
79 COG2807 CynX Cyanate permease 100.0 5.3E-27 1.1E-31 212.4 32.1 336 98-493 42-382 (395)
80 PRK08633 2-acyl-glycerophospho 100.0 1.2E-27 2.7E-32 268.3 34.6 343 109-487 46-401 (1146)
81 TIGR00806 rfc RFC reduced fola 100.0 2.4E-27 5.2E-32 225.9 30.9 361 49-465 37-408 (511)
82 COG0738 FucP Fucose permease [ 100.0 3.3E-27 7.2E-32 217.1 29.9 358 39-479 14-392 (422)
83 TIGR00882 2A0105 oligosacchari 100.0 5E-27 1.1E-31 232.2 33.0 355 98-493 33-392 (396)
84 KOG0253 Synaptic vesicle trans 100.0 5.9E-28 1.3E-32 217.2 21.4 414 31-503 71-525 (528)
85 TIGR00792 gph sugar (Glycoside 100.0 1.9E-26 4.2E-31 231.5 29.8 338 98-474 30-383 (437)
86 TIGR00901 2A0125 AmpG-related 100.0 4.9E-26 1.1E-30 222.0 30.3 311 98-456 18-355 (356)
87 PRK10207 dipeptide/tripeptide 100.0 2.2E-25 4.9E-30 223.7 35.1 376 98-497 45-477 (489)
88 TIGR02718 sider_RhtX_FptX side 100.0 8.1E-25 1.7E-29 216.0 36.7 372 40-490 3-385 (390)
89 KOG0254 Predicted transporter 100.0 4.9E-27 1.1E-31 238.9 21.3 380 110-510 89-496 (513)
90 KOG0252 Inorganic phosphate tr 99.9 3.7E-28 8E-33 225.4 10.1 432 32-508 35-508 (538)
91 KOG2615 Permease of the major 99.9 2.6E-26 5.7E-31 208.1 19.4 342 110-483 68-427 (451)
92 TIGR00805 oat sodium-independe 99.9 2.5E-26 5.4E-31 236.8 21.1 304 41-389 36-412 (633)
93 PF06609 TRI12: Fungal trichot 99.9 7.3E-25 1.6E-29 217.9 29.5 370 43-469 49-464 (599)
94 KOG0255 Synaptic vesicle trans 99.9 3.6E-25 7.7E-30 226.7 27.8 373 110-507 118-502 (521)
95 TIGR00924 yjdL_sub1_fam amino 99.9 1E-23 2.2E-28 211.8 37.4 374 98-496 43-468 (475)
96 PF00083 Sugar_tr: Sugar (and 99.9 9.5E-31 2.1E-35 263.7 -18.5 379 109-509 45-448 (451)
97 PTZ00207 hypothetical protein; 99.9 8.3E-24 1.8E-28 211.9 28.2 406 33-495 23-551 (591)
98 PRK09584 tppB putative tripept 99.9 9.7E-22 2.1E-26 198.6 34.8 376 98-495 52-478 (500)
99 PF03825 Nuc_H_symport: Nucleo 99.9 4E-21 8.6E-26 186.9 34.1 343 98-493 32-392 (400)
100 KOG2563 Permease of the major 99.9 5E-22 1.1E-26 185.3 25.2 394 30-495 37-449 (480)
101 PRK09669 putative symporter Ya 99.9 2.6E-21 5.6E-26 194.1 31.4 336 98-474 40-391 (444)
102 PRK10429 melibiose:sodium symp 99.9 1.5E-21 3.2E-26 197.1 29.1 340 98-472 37-393 (473)
103 TIGR01301 GPH_sucrose GPH fami 99.9 7.2E-21 1.6E-25 187.2 31.2 363 98-495 34-470 (477)
104 KOG4686 Predicted sugar transp 99.9 6.1E-23 1.3E-27 178.4 13.6 362 34-472 40-414 (459)
105 TIGR01272 gluP glucose/galacto 99.9 4.7E-21 1E-25 181.4 27.0 277 165-482 7-301 (310)
106 PF11700 ATG22: Vacuole efflux 99.9 6.4E-20 1.4E-24 181.8 35.8 351 110-493 70-465 (477)
107 PRK09848 glucuronide transport 99.9 1.2E-20 2.5E-25 189.7 30.1 334 98-472 39-388 (448)
108 TIGR00788 fbt folate/biopterin 99.9 1.1E-21 2.5E-26 196.4 22.5 384 36-486 24-433 (468)
109 PF01306 LacY_symp: LacY proto 99.9 3.1E-21 6.8E-26 183.7 22.7 360 98-498 38-402 (412)
110 PF13347 MFS_2: MFS/sugar tran 99.9 3.1E-20 6.8E-25 185.4 24.7 336 98-472 32-384 (428)
111 PRK15462 dipeptide/tripeptide 99.9 8.1E-19 1.8E-23 173.4 33.4 366 98-488 40-469 (493)
112 COG2211 MelB Na+/melibiose sym 99.8 2.5E-18 5.4E-23 165.4 30.5 339 98-472 43-396 (467)
113 PRK11462 putative transporter; 99.8 6.9E-18 1.5E-22 169.1 33.0 333 98-472 40-387 (460)
114 COG2270 Permeases of the major 99.8 3.5E-18 7.7E-23 159.0 25.4 347 109-492 57-425 (438)
115 PF03209 PUCC: PUCC protein; 99.8 1.6E-16 3.4E-21 148.7 33.2 332 98-472 10-363 (403)
116 KOG2325 Predicted transporter/ 99.8 1.9E-17 4E-22 159.7 20.5 356 108-496 69-475 (488)
117 COG3104 PTR2 Dipeptide/tripept 99.7 3.4E-15 7.3E-20 142.5 29.9 374 110-496 61-487 (498)
118 KOG3626 Organic anion transpor 99.7 5.3E-16 1.2E-20 155.7 23.4 262 98-374 127-457 (735)
119 PF03137 OATP: Organic Anion T 99.7 7.5E-19 1.6E-23 176.7 -0.7 356 98-472 33-514 (539)
120 KOG2816 Predicted transporter 99.7 2.7E-14 5.8E-19 140.2 25.3 317 119-472 71-392 (463)
121 TIGR00880 2_A_01_02 Multidrug 99.6 7.5E-15 1.6E-19 122.3 9.0 136 116-256 4-140 (141)
122 PRK10054 putative transporter; 99.5 6.9E-13 1.5E-17 130.9 20.2 173 306-493 7-179 (395)
123 PF03092 BT1: BT1 family; Int 99.5 3.8E-13 8.2E-18 133.2 17.2 344 98-472 20-380 (433)
124 PF05631 DUF791: Protein of un 99.5 4.5E-12 9.7E-17 117.2 22.3 231 98-372 64-304 (354)
125 TIGR00889 2A0110 nucleoside tr 99.5 4.4E-13 9.5E-18 133.1 15.2 149 110-259 251-407 (418)
126 PRK11663 regulatory protein Uh 99.5 2.1E-12 4.6E-17 129.2 19.1 166 311-492 28-194 (434)
127 PRK09528 lacY galactoside perm 99.5 4.5E-13 9.8E-18 133.7 12.6 145 110-259 262-408 (420)
128 PF01770 Folate_carrier: Reduc 99.5 4E-10 8.6E-15 107.4 31.5 329 114-460 45-390 (412)
129 PF07690 MFS_1: Major Facilita 99.4 4.2E-12 9.1E-17 123.6 17.9 165 313-492 3-168 (352)
130 TIGR00900 2A0121 H+ Antiporter 99.4 2.8E-12 6.1E-17 125.4 16.5 171 310-493 3-176 (365)
131 COG2271 UhpC Sugar phosphate p 99.4 9.5E-13 2.1E-17 123.0 12.2 173 310-498 33-208 (448)
132 PRK15462 dipeptide/tripeptide 99.4 7.2E-12 1.6E-16 124.4 19.0 173 307-491 10-184 (493)
133 PRK09584 tppB putative tripept 99.4 9.4E-12 2E-16 126.2 20.1 180 301-492 15-197 (500)
134 TIGR01299 synapt_SV2 synaptic 99.4 8.5E-13 1.8E-17 137.3 12.5 141 112-258 597-737 (742)
135 PRK10642 proline/glycine betai 99.4 3.3E-12 7.2E-17 129.8 15.5 150 110-263 286-438 (490)
136 COG2814 AraJ Arabinose efflux 99.4 1.4E-11 3.1E-16 116.6 17.7 175 307-497 14-189 (394)
137 PRK11646 multidrug resistance 99.4 1.6E-11 3.6E-16 121.3 18.9 169 309-492 13-181 (400)
138 TIGR00924 yjdL_sub1_fam amino 99.4 9.3E-12 2E-16 125.5 17.3 178 304-491 7-187 (475)
139 PRK15011 sugar efflux transpor 99.4 6E-12 1.3E-16 124.3 14.7 145 98-256 247-392 (393)
140 PRK10489 enterobactin exporter 99.4 8.2E-12 1.8E-16 124.6 15.4 181 297-490 8-191 (417)
141 PRK09874 drug efflux system pr 99.4 8.5E-12 1.8E-16 124.2 15.4 141 111-256 259-400 (408)
142 PRK05122 major facilitator sup 99.4 7.7E-12 1.7E-16 124.0 13.9 137 112-253 251-388 (399)
143 TIGR00882 2A0105 oligosacchari 99.4 3.4E-11 7.4E-16 119.2 18.4 174 305-492 1-179 (396)
144 PRK10504 putative transporter; 99.4 3.2E-11 6.9E-16 122.4 18.5 171 307-493 11-182 (471)
145 KOG3098 Uncharacterized conser 99.4 5E-10 1.1E-14 108.5 25.3 313 116-467 56-409 (461)
146 PRK11551 putative 3-hydroxyphe 99.4 6.2E-12 1.3E-16 125.0 12.5 143 98-252 250-394 (406)
147 PRK10207 dipeptide/tripeptide 99.3 4.3E-11 9.4E-16 120.7 18.5 171 307-489 15-187 (489)
148 PRK14995 methyl viologen resis 99.3 6.1E-11 1.3E-15 120.7 19.8 171 309-494 9-180 (495)
149 PRK03893 putative sialic acid 99.3 1.8E-11 3.9E-16 125.1 15.8 138 98-245 306-444 (496)
150 PRK10091 MFS transport protein 99.3 4.7E-11 1E-15 117.5 18.2 170 306-491 3-173 (382)
151 PRK03699 putative transporter; 99.3 6.3E-11 1.4E-15 117.1 18.3 167 309-491 10-178 (394)
152 TIGR00710 efflux_Bcr_CflA drug 99.3 3.9E-11 8.5E-16 118.4 16.4 158 320-493 19-177 (385)
153 TIGR00886 2A0108 nitrite extru 99.3 1E-10 2.2E-15 114.5 19.1 165 308-488 3-180 (366)
154 PRK03545 putative arabinose tr 99.3 5.3E-11 1.2E-15 117.6 17.1 151 326-492 29-180 (390)
155 PRK12382 putative transporter; 99.3 1.5E-11 3.2E-16 121.7 13.1 138 112-254 251-389 (392)
156 PRK10213 nepI ribonucleoside t 99.3 1.2E-10 2.6E-15 115.0 19.4 150 323-488 37-187 (394)
157 TIGR00712 glpT glycerol-3-phos 99.3 5.1E-11 1.1E-15 119.5 16.8 157 325-495 46-205 (438)
158 TIGR00711 efflux_EmrB drug res 99.3 6.5E-11 1.4E-15 120.7 17.8 167 311-493 7-174 (485)
159 TIGR00881 2A0104 phosphoglycer 99.3 1.1E-11 2.5E-16 121.8 11.7 162 316-493 5-168 (379)
160 TIGR00890 2A0111 Oxalate/Forma 99.3 6.8E-11 1.5E-15 116.2 16.9 158 320-494 17-175 (377)
161 TIGR00897 2A0118 polyol permea 99.3 1.3E-10 2.9E-15 115.1 19.0 165 307-484 14-181 (402)
162 PRK10473 multidrug efflux syst 99.3 1.3E-10 2.8E-15 114.9 18.5 165 313-493 10-175 (392)
163 cd06174 MFS The Major Facilita 99.3 1.4E-11 3E-16 119.8 11.2 135 110-249 211-347 (352)
164 TIGR00893 2A0114 d-galactonate 99.3 3.6E-11 7.9E-16 118.9 14.4 156 322-493 10-166 (399)
165 TIGR00879 SP MFS transporter, 99.3 1.8E-11 4E-16 124.4 12.5 154 98-258 314-474 (481)
166 TIGR00891 2A0112 putative sial 99.3 1.1E-10 2.4E-15 116.0 17.8 161 311-487 17-180 (405)
167 TIGR00895 2A0115 benzoate tran 99.3 5.6E-11 1.2E-15 117.8 15.1 156 322-493 33-189 (398)
168 TIGR00885 fucP L-fucose:H+ sym 99.3 2.4E-10 5.3E-15 113.1 19.2 168 309-489 6-200 (410)
169 TIGR02332 HpaX 4-hydroxyphenyl 99.3 1.7E-10 3.7E-15 114.6 18.2 157 321-493 23-186 (412)
170 TIGR00899 2A0120 sugar efflux 99.3 2.1E-10 4.6E-15 112.7 18.8 168 313-493 4-173 (375)
171 PLN00028 nitrate transmembrane 99.3 3.7E-10 8.1E-15 114.2 20.6 155 322-493 52-216 (476)
172 PRK11043 putative transporter; 99.3 1.9E-10 4.1E-15 114.1 18.2 161 317-492 14-177 (401)
173 TIGR00902 2A0127 phenyl propri 99.3 4.6E-11 1E-15 117.5 13.4 135 98-246 235-371 (382)
174 KOG3762 Predicted transporter 99.3 1.4E-10 3E-15 111.4 15.8 180 300-495 365-546 (618)
175 PRK11195 lysophospholipid tran 99.3 1.6E-10 3.5E-15 114.0 17.0 161 305-484 2-162 (393)
176 PRK12307 putative sialic acid 99.3 4.1E-10 8.8E-15 112.8 19.3 156 311-482 23-179 (426)
177 PRK11273 glpT sn-glycerol-3-ph 99.2 3.7E-10 8E-15 113.7 18.6 146 342-495 59-207 (452)
178 PRK03633 putative MFS family t 99.2 4.1E-10 9E-15 110.8 18.0 151 306-472 6-156 (381)
179 TIGR00883 2A0106 metabolite-pr 99.2 4.5E-11 9.8E-16 118.2 11.2 136 98-243 250-390 (394)
180 PRK11102 bicyclomycin/multidru 99.2 2.7E-10 6E-15 112.0 16.4 154 324-493 9-163 (377)
181 TIGR00892 2A0113 monocarboxyla 99.2 2.4E-11 5.3E-16 122.2 8.8 139 98-248 271-415 (455)
182 PF05977 MFS_3: Transmembrane 99.2 6.7E-10 1.4E-14 111.9 18.7 177 301-490 5-184 (524)
183 PRK09556 uhpT sugar phosphate 99.2 6.2E-11 1.3E-15 119.9 11.4 144 98-251 289-446 (467)
184 TIGR00903 2A0129 major facilit 99.2 5.1E-10 1.1E-14 108.9 17.3 155 322-493 7-162 (368)
185 PRK11652 emrD multidrug resist 99.2 6.3E-10 1.4E-14 110.1 18.2 157 319-491 21-178 (394)
186 PRK15402 multidrug efflux syst 99.2 6.1E-10 1.3E-14 110.7 17.9 154 323-492 30-184 (406)
187 PRK09705 cynX putative cyanate 99.2 6.9E-10 1.5E-14 109.6 17.7 147 323-486 26-174 (393)
188 PRK10077 xylE D-xylose transpo 99.2 1.9E-10 4E-15 117.2 13.8 148 110-258 306-461 (479)
189 PRK15403 multidrug efflux syst 99.2 1E-09 2.2E-14 109.0 17.9 150 327-492 37-187 (413)
190 PF02487 CLN3: CLN3 protein; 99.2 2.3E-08 5E-13 95.5 25.4 330 112-469 61-394 (402)
191 KOG0637 Sucrose transporter an 99.2 1.9E-09 4.1E-14 101.9 17.4 347 110-472 67-470 (498)
192 PRK15034 nitrate/nitrite trans 99.2 2.1E-09 4.6E-14 105.7 18.2 175 307-494 35-230 (462)
193 PF06813 Nodulin-like: Nodulin 99.1 1E-09 2.2E-14 98.5 13.9 184 36-259 1-186 (250)
194 TIGR00806 rfc RFC reduced fola 99.1 6.4E-09 1.4E-13 100.6 20.1 153 327-495 46-202 (511)
195 PRK10133 L-fucose transporter; 99.1 2.8E-09 6.1E-14 106.5 18.3 148 309-469 29-176 (438)
196 COG2223 NarK Nitrate/nitrite t 99.1 1.1E-09 2.3E-14 103.0 14.1 167 316-496 23-193 (417)
197 PF06963 FPN1: Ferroportin1 (F 99.1 9.3E-08 2E-12 93.2 28.0 334 118-465 46-411 (432)
198 KOG1330 Sugar transporter/spin 99.1 1.1E-10 2.4E-15 110.4 7.1 175 311-497 34-210 (493)
199 PRK09952 shikimate transporter 99.1 8.6E-10 1.9E-14 110.5 13.1 145 110-256 286-434 (438)
200 COG3104 PTR2 Dipeptide/tripept 99.1 1.7E-09 3.7E-14 103.9 13.8 188 302-496 16-206 (498)
201 PRK11128 putative 3-phenylprop 99.1 1.3E-09 2.9E-14 107.3 13.5 134 98-245 235-370 (382)
202 TIGR00898 2A0119 cation transp 99.1 1.8E-09 4E-14 110.6 15.0 137 117-258 362-498 (505)
203 PRK11902 ampG muropeptide tran 99.1 7.5E-09 1.6E-13 102.7 18.7 163 313-490 6-176 (402)
204 PRK11010 ampG muropeptide tran 99.1 1.2E-08 2.7E-13 103.4 19.9 177 301-492 7-191 (491)
205 TIGR00894 2A0114euk Na(+)-depe 99.1 1E-09 2.2E-14 111.2 11.8 144 341-493 71-216 (465)
206 KOG3764 Vesicular amine transp 99.1 1.4E-09 2.9E-14 100.9 11.0 148 341-498 101-249 (464)
207 TIGR00880 2_A_01_02 Multidrug 99.0 2.7E-09 5.8E-14 88.5 11.9 131 352-493 4-135 (141)
208 PTZ00207 hypothetical protein; 99.0 1.3E-08 2.8E-13 103.1 18.0 159 323-496 44-205 (591)
209 PRK06814 acylglycerophosphoeth 99.0 7E-09 1.5E-13 116.9 17.9 171 301-483 6-182 (1140)
210 TIGR00887 2A0109 phosphate:H+ 99.0 2.2E-08 4.9E-13 102.3 19.1 120 342-469 52-174 (502)
211 TIGR00769 AAA ADP/ATP carrier 99.0 7.5E-06 1.6E-10 81.0 35.0 259 110-388 43-345 (472)
212 PRK08633 2-acyl-glycerophospho 99.0 1.1E-08 2.3E-13 115.8 17.4 159 302-472 5-165 (1146)
213 TIGR00792 gph sugar (Glycoside 99.0 4.3E-09 9.3E-14 105.8 12.3 119 110-232 257-383 (437)
214 PF06609 TRI12: Fungal trichot 99.0 2.5E-08 5.5E-13 100.4 17.5 156 327-500 65-221 (599)
215 PRK15075 citrate-proton sympor 99.0 1E-08 2.2E-13 102.8 14.0 122 110-233 274-398 (434)
216 PF11700 ATG22: Vacuole efflux 99.0 1.1E-08 2.4E-13 102.0 14.0 151 98-256 312-469 (477)
217 PF01306 LacY_symp: LacY proto 98.9 7E-09 1.5E-13 99.7 11.9 146 110-260 259-406 (412)
218 TIGR02718 sider_RhtX_FptX side 98.9 9E-09 1.9E-13 101.7 12.9 142 98-246 238-383 (390)
219 TIGR00901 2A0125 AmpG-related 98.9 2.4E-08 5.2E-13 97.4 15.6 153 324-491 6-173 (356)
220 TIGR01301 GPH_sucrose GPH fami 98.9 2.7E-08 5.8E-13 98.7 15.9 173 311-494 9-216 (477)
221 TIGR01272 gluP glucose/galacto 98.9 1.2E-08 2.5E-13 96.9 12.7 129 98-241 173-302 (310)
222 TIGR00896 CynX cyanate transpo 98.9 3E-08 6.4E-13 96.7 15.9 144 325-486 19-165 (355)
223 PRK10406 alpha-ketoglutarate t 98.9 6.2E-08 1.3E-12 97.1 18.4 130 350-487 67-210 (432)
224 COG0738 FucP Fucose permease [ 98.9 6.6E-08 1.4E-12 90.5 16.6 144 316-471 22-165 (422)
225 KOG3810 Micronutrient transpor 98.9 1.1E-07 2.4E-12 86.5 16.7 350 120-491 52-416 (433)
226 TIGR00805 oat sodium-independe 98.9 7.7E-09 1.7E-13 107.5 10.4 144 341-492 63-277 (633)
227 KOG2532 Permease of the major 98.9 1.6E-08 3.6E-13 100.2 11.8 149 340-497 67-217 (466)
228 COG2270 Permeases of the major 98.9 2.2E-08 4.9E-13 94.2 11.7 146 98-256 283-430 (438)
229 KOG2615 Permease of the major 98.9 4.3E-08 9.4E-13 90.6 12.8 119 341-471 63-181 (451)
230 KOG4686 Predicted sugar transp 98.8 2.2E-08 4.7E-13 88.5 10.3 144 98-255 295-443 (459)
231 KOG0569 Permease of the major 98.8 6E-08 1.3E-12 95.2 13.8 155 98-260 300-460 (485)
232 PF03825 Nuc_H_symport: Nucleo 98.8 4.9E-08 1.1E-12 95.6 13.2 144 110-257 243-398 (400)
233 KOG4332 Predicted sugar transp 98.8 4.8E-07 1E-11 79.5 16.9 333 110-492 72-427 (454)
234 KOG2504 Monocarboxylate transp 98.8 2.7E-08 5.9E-13 99.9 10.4 174 39-255 299-476 (509)
235 COG0477 ProP Permeases of the 98.7 1.4E-07 3.1E-12 89.7 13.0 133 111-246 40-177 (338)
236 PRK09848 glucuronide transport 98.7 7.8E-08 1.7E-12 96.9 10.8 116 110-228 264-386 (448)
237 TIGR00926 2A1704 Peptide:H+ sy 98.7 3.5E-06 7.6E-11 87.3 21.8 142 110-251 23-179 (654)
238 KOG3574 Acetyl-CoA transporter 98.6 1.4E-05 3E-10 74.2 21.3 311 126-472 79-431 (510)
239 TIGR00788 fbt folate/biopterin 98.6 5.3E-07 1.1E-11 90.9 13.6 152 98-256 283-447 (468)
240 KOG0255 Synaptic vesicle trans 98.6 3E-07 6.5E-12 94.6 11.3 138 341-491 113-250 (521)
241 PF13000 Acatn: Acetyl-coenzym 98.6 0.00026 5.7E-09 68.7 29.4 182 183-369 133-336 (544)
242 PRK10429 melibiose:sodium symp 98.6 1.4E-06 3E-11 88.3 15.3 143 313-467 13-164 (473)
243 PF13347 MFS_2: MFS/sugar tran 98.6 3.3E-07 7.2E-12 91.7 10.6 116 110-228 260-382 (428)
244 PRK09669 putative symporter Ya 98.5 4.6E-07 1E-11 91.1 11.2 164 316-490 19-198 (444)
245 KOG2533 Permease of the major 98.5 8.3E-07 1.8E-11 88.4 12.4 145 341-496 76-227 (495)
246 PF06813 Nodulin-like: Nodulin 98.5 2.9E-06 6.3E-11 76.4 14.5 152 322-488 18-173 (250)
247 KOG0253 Synaptic vesicle trans 98.5 2.3E-07 5E-12 85.4 5.5 129 120-255 391-519 (528)
248 COG2807 CynX Cyanate permease 98.4 1.6E-05 3.4E-10 73.8 16.7 140 341-493 42-183 (395)
249 PRK11462 putative transporter; 98.4 4.8E-06 1E-10 83.9 14.8 143 314-468 17-168 (460)
250 PF03209 PUCC: PUCC protein; 98.4 1.1E-05 2.4E-10 76.6 15.3 142 98-248 239-392 (403)
251 COG2211 MelB Na+/melibiose sym 98.4 8.9E-06 1.9E-10 79.4 14.3 149 312-471 18-174 (467)
252 PF05978 UNC-93: Ion channel r 98.3 5.1E-06 1.1E-10 68.9 10.3 107 116-228 43-149 (156)
253 PF03219 TLC: TLC ATP/ADP tran 98.3 0.00075 1.6E-08 67.4 27.3 263 110-388 58-361 (491)
254 KOG2325 Predicted transporter/ 98.3 7.4E-06 1.6E-10 80.2 12.1 181 309-501 37-234 (488)
255 KOG0254 Predicted transporter 98.3 7.7E-06 1.7E-10 83.8 13.0 133 347-491 90-225 (513)
256 KOG3762 Predicted transporter 98.3 1.1E-06 2.5E-11 85.1 6.2 134 110-248 406-541 (618)
257 PF05631 DUF791: Protein of un 98.3 6.7E-05 1.5E-09 70.2 17.6 146 341-493 64-213 (354)
258 TIGR00926 2A1704 Peptide:H+ sy 98.3 1.6E-05 3.4E-10 82.5 14.1 164 321-493 2-179 (654)
259 PF00083 Sugar_tr: Sugar (and 98.2 2.5E-08 5.4E-13 100.7 -7.0 141 120-260 296-442 (451)
260 PF06779 DUF1228: Protein of u 98.2 1.4E-06 3E-11 63.2 4.0 80 50-171 4-83 (85)
261 KOG0252 Inorganic phosphate tr 98.2 6.3E-06 1.4E-10 78.6 9.1 116 342-465 80-199 (538)
262 PF12832 MFS_1_like: MFS_1 lik 98.1 2.6E-05 5.7E-10 56.2 9.2 71 310-385 4-74 (77)
263 TIGR00939 2a57 Equilibrative N 98.1 0.00043 9.4E-09 68.5 20.2 137 116-257 51-198 (437)
264 KOG3880 Predicted small molecu 97.9 0.00041 8.9E-09 62.7 14.1 325 112-466 64-398 (409)
265 COG3202 ATP/ADP translocase [E 97.9 0.032 6.9E-07 54.6 33.0 261 110-390 61-366 (509)
266 KOG2816 Predicted transporter 97.9 0.00062 1.3E-08 67.7 16.0 118 98-228 272-390 (463)
267 KOG1237 H+/oligopeptide sympor 97.9 0.0014 3.1E-08 66.9 18.8 138 110-247 73-238 (571)
268 PF03092 BT1: BT1 family; Int 97.8 0.00043 9.4E-09 69.0 15.0 153 330-493 13-172 (433)
269 PF07672 MFS_Mycoplasma: Mycop 97.8 0.00078 1.7E-08 60.0 14.0 242 200-469 2-265 (267)
270 KOG1479 Nucleoside transporter 97.7 0.0019 4.1E-08 61.8 15.3 110 324-434 261-375 (406)
271 PF12832 MFS_1_like: MFS_1 lik 97.7 7.9E-05 1.7E-09 53.7 4.6 46 98-150 30-75 (77)
272 KOG2563 Permease of the major 97.6 0.0012 2.7E-08 63.3 12.8 154 306-472 41-202 (480)
273 KOG3097 Predicted membrane pro 97.6 0.009 2E-07 54.9 17.2 101 121-227 69-180 (390)
274 PF06963 FPN1: Ferroportin1 (F 97.5 0.023 4.9E-07 56.0 20.9 185 308-497 4-201 (432)
275 PRK03612 spermidine synthase; 97.5 0.017 3.6E-07 58.9 20.5 167 312-491 20-192 (521)
276 PRK03612 spermidine synthase; 97.4 0.0034 7.3E-08 63.8 14.1 137 110-248 50-191 (521)
277 PF00854 PTR2: POT family; In 97.4 0.00061 1.3E-08 66.7 8.3 111 141-252 2-120 (372)
278 PF05978 UNC-93: Ion channel r 97.4 0.02 4.4E-07 47.6 15.8 106 351-468 42-147 (156)
279 PF03137 OATP: Organic Anion T 97.4 3.5E-05 7.5E-10 78.4 -0.7 122 341-470 33-201 (539)
280 COG0477 ProP Permeases of the 97.1 0.064 1.4E-06 50.4 19.3 151 321-484 17-173 (338)
281 PF01770 Folate_carrier: Reduc 97.0 0.039 8.4E-07 53.5 15.7 157 326-497 23-183 (412)
282 TIGR00769 AAA ADP/ATP carrier 97.0 0.12 2.7E-06 51.6 19.6 119 344-470 41-189 (472)
283 PF06779 DUF1228: Protein of u 96.9 0.012 2.6E-07 42.8 9.1 71 320-395 6-76 (85)
284 PF02487 CLN3: CLN3 protein; 96.8 0.011 2.4E-07 57.2 10.2 115 110-228 281-395 (402)
285 PF00854 PTR2: POT family; In 96.5 0.0084 1.8E-07 58.7 7.8 112 377-493 2-120 (372)
286 KOG3626 Organic anion transpor 96.3 0.011 2.4E-07 61.2 7.2 160 324-495 114-342 (735)
287 KOG0637 Sucrose transporter an 96.0 0.037 8.1E-07 53.6 8.7 144 314-469 40-202 (498)
288 PF01733 Nucleoside_tran: Nucl 95.7 0.0033 7.1E-08 59.6 0.7 85 350-434 186-280 (309)
289 KOG3098 Uncharacterized conser 95.6 0.17 3.6E-06 50.1 11.9 108 119-227 288-411 (461)
290 KOG1237 H+/oligopeptide sympor 95.2 0.4 8.8E-06 49.3 13.4 173 315-493 46-242 (571)
291 PF03219 TLC: TLC ATP/ADP tran 94.9 3.2 6.8E-05 42.0 18.5 31 441-471 175-205 (491)
292 KOG2601 Iron transporter [Inor 94.8 0.3 6.4E-06 46.2 10.1 117 122-238 75-210 (503)
293 TIGR00939 2a57 Equilibrative N 93.1 1.6 3.4E-05 43.6 12.4 114 113-227 310-431 (437)
294 KOG4332 Predicted sugar transp 92.9 0.2 4.3E-06 45.1 5.0 146 341-492 67-216 (454)
295 KOG2601 Iron transporter [Inor 92.6 3.5 7.6E-05 39.3 12.8 178 306-489 27-219 (503)
296 KOG1479 Nucleoside transporter 91.2 16 0.00034 35.7 16.0 26 402-427 117-142 (406)
297 COG4262 Predicted spermidine s 90.9 15 0.00032 34.9 17.3 143 341-493 38-188 (508)
298 COG3202 ATP/ADP translocase [E 90.2 22 0.00047 35.6 18.5 123 343-472 58-210 (509)
299 COG4262 Predicted spermidine s 88.5 9 0.0002 36.2 11.5 85 110-195 43-132 (508)
300 KOG3574 Acetyl-CoA transporter 87.6 10 0.00022 36.6 11.4 66 308-381 33-103 (510)
301 COG5336 Uncharacterized protei 86.3 2.5 5.5E-05 31.8 5.5 32 441-472 37-68 (116)
302 PF07672 MFS_Mycoplasma: Mycop 81.6 22 0.00048 32.3 10.5 107 112-219 143-254 (267)
303 PF01733 Nucleoside_tran: Nucl 78.9 0.75 1.6E-05 43.6 0.5 113 115-227 187-307 (309)
304 KOG3880 Predicted small molecu 78.1 7.1 0.00015 36.3 6.3 109 110-227 288-401 (409)
305 PF02990 EMP70: Endomembrane p 76.7 58 0.0013 33.5 13.3 9 300-308 252-260 (521)
306 PF13000 Acatn: Acetyl-coenzym 69.3 30 0.00065 34.8 8.6 69 310-382 4-76 (544)
307 KOG2881 Predicted membrane pro 69.0 43 0.00092 30.2 8.6 24 366-389 260-283 (294)
308 KOG4830 Predicted sugar transp 64.7 5.1 0.00011 36.1 2.3 63 298-364 193-255 (412)
309 COG5336 Uncharacterized protei 60.6 42 0.0009 25.6 6.0 21 353-373 49-69 (116)
310 PF03547 Mem_trans: Membrane t 59.7 1.2E+02 0.0027 29.6 11.4 164 353-523 2-172 (385)
311 PF03606 DcuC: C4-dicarboxylat 59.5 94 0.002 31.5 10.5 12 367-378 105-116 (465)
312 KOG3097 Predicted membrane pro 59.2 96 0.0021 29.5 9.4 69 356-428 68-136 (390)
313 KOG3810 Micronutrient transpor 57.2 42 0.0009 32.2 6.8 94 113-211 274-369 (433)
314 COG2962 RarD Predicted permeas 56.6 1.7E+02 0.0036 27.2 10.3 80 299-390 62-141 (293)
315 KOG1278 Endosomal membrane pro 55.4 1.6E+02 0.0034 30.1 10.7 32 342-373 355-386 (628)
316 PF06912 DUF1275: Protein of u 55.1 1.5E+02 0.0032 26.1 11.6 36 205-241 163-199 (209)
317 PRK10263 DNA translocase FtsK; 52.8 2.8E+02 0.0061 31.9 13.2 24 354-377 60-83 (1355)
318 PF06027 DUF914: Eukaryotic pr 51.7 1.5E+02 0.0032 28.4 9.8 9 133-141 62-70 (334)
319 COG2233 UraA Xanthine/uracil p 46.6 3.2E+02 0.0069 27.4 12.0 117 313-433 20-136 (451)
320 PRK02237 hypothetical protein; 38.6 62 0.0013 24.8 4.0 49 112-160 58-106 (109)
321 PF02694 UPF0060: Uncharacteri 38.5 60 0.0013 24.8 3.9 51 110-160 54-104 (107)
322 PF07760 DUF1616: Protein of u 37.9 3E+02 0.0065 25.7 9.6 57 171-228 22-78 (287)
323 PF12805 FUSC-like: FUSC-like 37.3 1E+02 0.0022 28.7 6.4 36 144-183 3-38 (284)
324 PF07857 DUF1632: CEO family ( 33.4 1.8E+02 0.0039 26.6 7.0 6 480-485 119-124 (254)
325 COG2076 EmrE Membrane transpor 31.9 1.7E+02 0.0038 22.5 5.6 56 128-187 18-73 (106)
326 PF02694 UPF0060: Uncharacteri 31.7 1E+02 0.0022 23.6 4.3 48 346-393 54-101 (107)
327 PF11023 DUF2614: Protein of u 29.8 2.7E+02 0.0058 21.6 6.2 19 370-388 5-23 (114)
328 PF11947 DUF3464: Protein of u 28.7 2E+02 0.0044 23.8 5.9 52 165-219 94-145 (153)
329 PRK02237 hypothetical protein; 27.6 1.7E+02 0.0038 22.4 4.9 48 346-393 56-103 (109)
330 PF08611 DUF1774: Fungal prote 27.0 2.7E+02 0.0058 21.0 5.6 20 473-492 51-70 (97)
331 KOG4112 Signal peptidase subun 26.5 2.1E+02 0.0045 21.3 4.8 31 204-234 23-53 (101)
332 COG1268 BioY Uncharacterized c 25.9 1.2E+02 0.0027 26.0 4.4 23 117-139 89-111 (184)
333 PRK02935 hypothetical protein; 25.5 3.1E+02 0.0067 20.9 6.7 56 369-426 5-60 (110)
334 PF02632 BioY: BioY family; I 25.1 1.4E+02 0.0031 24.6 4.5 26 116-141 59-84 (148)
335 TIGR01666 YCCS hypothetical me 24.8 2.3E+02 0.005 30.5 7.1 52 129-184 42-97 (704)
336 PF13536 EmrE: Multidrug resis 24.7 3.3E+02 0.007 20.9 9.3 14 371-384 84-97 (113)
337 PF06645 SPC12: Microsomal sig 24.7 88 0.0019 22.4 2.8 33 460-493 21-53 (76)
338 TIGR01667 YCCS_YHJK integral m 24.7 3E+02 0.0065 29.6 8.0 53 128-184 41-97 (701)
339 PF07857 DUF1632: CEO family ( 24.4 5.5E+02 0.012 23.5 14.4 25 312-336 184-208 (254)
340 COG4327 Predicted membrane pro 24.2 97 0.0021 22.8 2.9 11 473-483 49-59 (101)
341 TIGR02230 ATPase_gene1 F0F1-AT 23.6 2.3E+02 0.005 21.6 4.9 35 119-153 51-86 (100)
342 PTZ00370 STEVOR; Provisional 22.8 3.3E+02 0.0072 25.2 6.6 24 474-497 257-280 (296)
343 PF10183 ESSS: ESSS subunit of 22.7 1.1E+02 0.0025 23.4 3.3 29 230-258 57-85 (105)
344 PF15048 OSTbeta: Organic solu 22.5 1.6E+02 0.0034 23.3 3.9 19 473-491 34-52 (125)
345 COG2836 Uncharacterized conser 22.1 5.7E+02 0.012 22.8 15.0 31 343-373 161-191 (232)
346 PF11299 DUF3100: Protein of u 20.9 1.5E+02 0.0032 26.5 3.9 63 173-236 110-175 (241)
347 PF06783 UPF0239: Uncharacteri 20.7 2.4E+02 0.0052 20.6 4.2 20 233-252 23-42 (85)
348 PRK13629 threonine/serine tran 20.4 8.8E+02 0.019 24.4 18.7 44 199-246 19-62 (443)
349 PF04277 OAD_gamma: Oxaloaceta 20.2 2.2E+02 0.0048 20.2 4.3 9 476-484 14-22 (79)
No 1
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.4e-46 Score=343.42 Aligned_cols=412 Identities=30% Similarity=0.481 Sum_probs=352.2
Q ss_pred cccccccchhhHHHHHHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCC
Q 009816 28 RNLSFKNHQAIVLIVTFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSD 107 (524)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 107 (524)
.++..+++|+++++.++++|...|+.|.+++.+.|.+.++ .++|.
T Consensus 19 ~~~~y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~------------------------------~~lsk----- 63 (448)
T COG2271 19 IDKTYKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIED------------------------------GGLSK----- 63 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHh------------------------------cCCCH-----
Confidence 3456788999999999999999999999999999999999 77877
Q ss_pred chhhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchh
Q 009816 108 GTALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWP 187 (524)
Q Consensus 108 ~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~ 187 (524)
+|+|++.+++.+.|+++..+.|.++||.+.|+.+..++++.++..++++++ ++++.+.+..++.|..+|..+|
T Consensus 64 --~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs-----~s~~~~~~l~~lng~fQg~Gwp 136 (448)
T COG2271 64 --TQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFS-----PSLFLFAVLWVLNGWFQGMGWP 136 (448)
T ss_pred --HHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhh-----hHHHHHHHHHHHHHHHhcCCCc
Confidence 999999999999999999999999999999999999999999999999997 8999999999999999999999
Q ss_pred hHHHHHhhccccccccceehhhhhhhhhHHHHHHHHH--HHhh-hcCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCC
Q 009816 188 SVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVA--SALL-TYGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTD 264 (524)
Q Consensus 188 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~--~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (524)
++...++.|++++|||+..++.+.+-++|..+.|++. +.+. +++||..|++.++++++.+++.++..+|+|++..-+
T Consensus 137 p~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP 216 (448)
T COG2271 137 PCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLP 216 (448)
T ss_pred HHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCC
Confidence 9999999999999999999999999999999998888 6666 669999999999999999999999999999887655
Q ss_pred CccccccCCccccCCCcccccccchhh-hhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCC
Q 009816 265 TNEEDESLSPKKIGEGVTQPLLRRETK-IEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYL 343 (524)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 343 (524)
+.++-..+..+.+.+ +++.+ ......-++.+++||.+|.++++.++.+..-+++..|.|.|+.+. +|+
T Consensus 217 ~ie~~~~d~~e~~~~-------~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~----k~~ 285 (448)
T COG2271 217 PIEEYRGDPLEIYEE-------EKENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEV----KGF 285 (448)
T ss_pred CHHHhhcCchhhhhh-------hccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh----cCC
Confidence 433222111111000 00001 122334567789999999999999999999999999999999998 899
Q ss_pred ChhhhhhHHHHHHHHHHhhhHHHHHHHhhh--hhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhH
Q 009816 344 SSEMAGNLSTLFDVGGVLGGILAGHISDRL--DARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYA 421 (524)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 421 (524)
|...++...+.+-+++++|.+++|+++||+ |||....+.+.+.....++.....+..+.+...++++..|+...+..-
T Consensus 286 s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqm 365 (448)
T COG2271 286 SLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQM 365 (448)
T ss_pred CHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHH
Confidence 999999999999999999999999999997 677777666666665555555555556678888889999999888886
Q ss_pred HHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhh-hhhhhhhhhHhhccc-ChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 009816 422 LITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSV-GAAIGPLLTGYISAT-SWTAVFTMLMAAALISGLLLTRLVVAE 499 (524)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (524)
.+.....+..| ++..|++.|+...++++ |.+.+....|++.|. ||...|++..+.++++.++.....+.+
T Consensus 366 LiGl~a~e~~p--------K~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~~~~~ 437 (448)
T COG2271 366 LIGLAAAEFVP--------KKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPVWNAE 437 (448)
T ss_pred HHHHHHhcccc--------HhhccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHHHhhc
Confidence 66666666655 58889999999999999 999999999999998 999999999888888877766555443
Q ss_pred h
Q 009816 500 V 500 (524)
Q Consensus 500 ~ 500 (524)
.
T Consensus 438 ~ 438 (448)
T COG2271 438 E 438 (448)
T ss_pred c
Confidence 3
No 2
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=2.4e-40 Score=333.62 Aligned_cols=414 Identities=23% Similarity=0.290 Sum_probs=310.3
Q ss_pred cccccchhhHHHHHHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCch
Q 009816 30 LSFKNHQAIVLIVTFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGT 109 (524)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 109 (524)
+...+..+.++.+.+++++..+++|.+++++.|.+.+| +|++.
T Consensus 21 ~~~~~~~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~------------------------------~~~s~------- 63 (467)
T PRK09556 21 KMWFKPFMQSYLVVFIGYLTMYLIRKNFKAAQNDMIST------------------------------YGLST------- 63 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHh------------------------------cCCCH-------
Confidence 34556688889999999999999999999999999998 88887
Q ss_pred hhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhH
Q 009816 110 ALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSV 189 (524)
Q Consensus 110 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~ 189 (524)
++.|++.+++.+++.++++++|+++||+|||+++..+.++++++.++.++......++++.+++.|+++|++.+...|..
T Consensus 64 ~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 143 (467)
T PRK09556 64 TELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCS 143 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHH
Confidence 99999999999999999999999999999999999888888777766654211112799999999999999999999999
Q ss_pred HHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhhh-c---CchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCC
Q 009816 190 VAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALLT-Y---GWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDT 265 (524)
Q Consensus 190 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~-~---gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (524)
.+++++|+|+++|++++|+...+.++|.++++++..++.. + +||..|.+.+++.++.+++.+++.++.|++....+
T Consensus 144 ~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~ 223 (467)
T PRK09556 144 YSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGK 223 (467)
T ss_pred HHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCC
Confidence 9999999999999999999999999999999988876653 2 69999999888888877777777777766543222
Q ss_pred ccccccCCccccCCCcccccccchhhhhhhhhh-HHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCC
Q 009816 266 NEEDESLSPKKIGEGVTQPLLRRETKIEEKAVG-FIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLS 344 (524)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 344 (524)
.++. ... ...++ +. ..+.+....... .+..+++|.+|...+..++.....++...|+|.|+++. +|++
T Consensus 224 ~~~~-~~~--~~~~~--~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~----~g~s 292 (467)
T PRK09556 224 AEEI-FGE--PISEE--DK--ETESTDMTKWQIFVEYVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQE----LGFS 292 (467)
T ss_pred hhhc-ccC--ccchh--hh--ccccccCcHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----cCCC
Confidence 1110 000 00000 00 000000000111 22368899999998888888888888889999999887 8999
Q ss_pred hhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHH
Q 009816 345 SEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALIT 424 (524)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 424 (524)
..++++......++.+++.++.|+++||+++|+.+........+...++.. ....+.....+..++.|++..+......
T Consensus 293 ~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~G~~~~~~~~~~~ 371 (467)
T PRK09556 293 KEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVY-QHATSEYMYLASLFALGFLVFGPQLLIG 371 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHH-HhcCcHHHHHHHHHHHHHHHhhHHHHHH
Confidence 999999999999999999999999999999988765544333332222221 1123344444555566654433333333
Q ss_pred HHHHhhhcccccCCCCccchhHHHHHHHhhhhh-hhhhhhhhhHhhcc------------c-ChhHHHHHHHHHHHHHHH
Q 009816 425 TAVSADLGTHSSLKGNSRALATVTAIIDGTGSV-GAAIGPLLTGYISA------------T-SWTAVFTMLMAAALISGL 490 (524)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~i~~~~~g~l~~------------~-~~~~~~~~~~~~~~~~~~ 490 (524)
....+..| ++.+|++.|+.+...++ |++++|.+.|++.| . +|+..|.+..++.+++.+
T Consensus 372 ~~~~~~~p--------~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~ 443 (467)
T PRK09556 372 VAAVGFVP--------KKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCIC 443 (467)
T ss_pred HHHHhhcc--------hhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHH
Confidence 44556665 47789999999999997 77999999999999 4 799999988887777766
Q ss_pred HHHHHHHHHh
Q 009816 491 LLTRLVVAEV 500 (524)
Q Consensus 491 ~~~~~~~~~~ 500 (524)
....+...++
T Consensus 444 ~~~~~~~~~~ 453 (467)
T PRK09556 444 LMAIVAVMEE 453 (467)
T ss_pred HHHHHHHHHH
Confidence 6554443333
No 3
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.1e-39 Score=301.77 Aligned_cols=375 Identities=19% Similarity=0.232 Sum_probs=318.4
Q ss_pred cchhhHHHHHHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhhHh
Q 009816 34 NHQAIVLIVTFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTALLG 113 (524)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g 113 (524)
+..|..+..+.++.|...........++|++.+| +|+++ .+.|
T Consensus 9 ~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~d------------------------------l~vs~-------~~aG 51 (394)
T COG2814 9 KPMWLALLALALAAFAIGTTEFVPVGLLPPIAAD------------------------------LGVSE-------GAAG 51 (394)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHhchHHHHHH------------------------------cCCCH-------HHHH
Confidence 3445556666666677777777788889999999 99998 9999
Q ss_pred HHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHHHH
Q 009816 114 ELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVAVV 193 (524)
Q Consensus 114 ~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i 193 (524)
+..|.|.+++.+++++...+.||+.||++++..+.++.++.++++++ +||+.++++|++.|+..|.+++...++.
T Consensus 52 ~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alA-----p~f~~Ll~aR~~~g~a~G~f~~i~~~~a 126 (394)
T COG2814 52 QLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALA-----PSFAVLLLARALAGLAHGVFWSIAAALA 126 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHh-----ccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998 9999999999999999999999999999
Q ss_pred hhccccccccceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCccccccC
Q 009816 194 GNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNEEDESL 272 (524)
Q Consensus 194 ~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (524)
.+..|+++|++++++...+..++.++|.++|.++. .+|||++|++.++++++..+..+..+| |++....+..
T Consensus 127 ~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP--~~~~~~~~~~----- 199 (394)
T COG2814 127 ARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP--PSEISGSLPG----- 199 (394)
T ss_pred HHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC--CccCCCCCCc-----
Confidence 99999999999999999999999999999999998 579999999999999999999999998 2221111100
Q ss_pred CccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHH
Q 009816 273 SPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLS 352 (524)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 352 (524)
...+..+.+|+|.++...+..++.....+..++++..++++. .|++....++++
T Consensus 200 ----------------------~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v----~g~s~~~vs~~L 253 (394)
T COG2814 200 ----------------------PLRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESV----AGFSVSAVSLVL 253 (394)
T ss_pred ----------------------chhHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHc----cCCCHhHHHHHH
Confidence 122346889999999999999999999999999999999998 899999999999
Q ss_pred HHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhc
Q 009816 353 TLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLG 432 (524)
Q Consensus 353 ~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 432 (524)
..++++.++|+.++|++.|| +.|+.+.....+..+..+.+... ..+.+......++.|+..............+..
T Consensus 254 l~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~--~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~- 329 (394)
T COG2814 254 LAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFT--GASPALALALLFLWGFAFSPALQGLQTRLARLA- 329 (394)
T ss_pred HHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHh--cchHHHHHHHHHHHHHHhhhhhhHHHHHhcccC-
Confidence 99999999999999999999 88888877777776666665443 344455566666677776666555555555532
Q ss_pred ccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-ChhHHHHHHHHHHHHHHHHHHHH
Q 009816 433 THSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-SWTAVFTMLMAAALISGLLLTRL 495 (524)
Q Consensus 433 ~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~ 495 (524)
++.+..+.+++....++|..+|..++|.+.|+ |+....++.+.+.+++.++....
T Consensus 330 --------p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~ 385 (394)
T COG2814 330 --------PDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLS 385 (394)
T ss_pred --------CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHH
Confidence 35668999999999999999999999999999 89988888888887776666543
No 4
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=1.1e-38 Score=318.38 Aligned_cols=398 Identities=24% Similarity=0.403 Sum_probs=295.7
Q ss_pred ccchhhHHHHHHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhhH
Q 009816 33 KNHQAIVLIVTFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTALL 112 (524)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 112 (524)
+++++.+....+++++..++++..++...|.+.++ +|++. .+.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------~g~s~-------~~~ 60 (434)
T PRK11663 18 RYWRRHILITMYLGYALFYFTRKSFNAAMPEMLAD------------------------------LGLSR-------SDI 60 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHh------------------------------cCCCH-------HHH
Confidence 45667777888889999999999999999999888 88887 999
Q ss_pred hHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHHH
Q 009816 113 GELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVAV 192 (524)
Q Consensus 113 g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~ 192 (524)
|++.+.+.+++.+++++.|+++||+|||+++.++.++.+++.++++++ ++++.+++.|++.|++.|...+...++
T Consensus 61 g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~~l~g~~~g~~~~~~~~~ 135 (434)
T PRK11663 61 GLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFS-----SSLWAFALLWVLNAFFQGWGWPVCAKL 135 (434)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHH-----hHHHHHHHHHHHHHHHHHccchHHHHH
Confidence 999999999999999999999999999999999999999999999987 899999999999999999999999999
Q ss_pred HhhccccccccceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCcccccc
Q 009816 193 VGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNEEDES 271 (524)
Q Consensus 193 i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (524)
+.+++|+++|++++++.+.+.++|..++|.+++.+. .+|||+.|++.+++.++..++.++.+||+|++......++.+.
T Consensus 136 ~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 215 (434)
T PRK11663 136 LTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRH 215 (434)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccc
Confidence 999999999999999999999999999999998887 6799999999888777666666667787765432111110000
Q ss_pred CCccccCCCcccccccchhhhhhhhhhH-HHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhh
Q 009816 272 LSPKKIGEGVTQPLLRRETKIEEKAVGF-IEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGN 350 (524)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 350 (524)
.. ++..++ .+.+..+....+ ...+++|.++.+.+..++..........|+|.|+++. +|++..+++.
T Consensus 216 ~~-~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~----~g~s~~~a~~ 283 (434)
T PRK11663 216 DA-LELAQQ-------QEGAGLSRKEILTKYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSET----LGVDLVTANS 283 (434)
T ss_pred cc-cccchh-------ccccCCChhhhHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----cCCCHHHHHH
Confidence 00 000000 000000001111 2356788888887777777777778888999999776 7999999999
Q ss_pred HHHHHHHHHHhhhHHHHHHHhhh--hhhHHHH-HHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHH
Q 009816 351 LSTLFDVGGVLGGILAGHISDRL--DARAITA-ASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAV 427 (524)
Q Consensus 351 ~~~~~~~~~~~~~~~~g~l~dr~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 427 (524)
..+...++.++++++.|++.||+ ++|+... ............+... +..+........+..|++............
T Consensus 284 ~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 362 (434)
T PRK11663 284 AVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLM-PFASYVMQAACFFTIGFFVFGPQMLIGMAA 362 (434)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHc-ccccHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 99999999999999999999998 3333322 2111111111111111 122222223333344443322222233344
Q ss_pred HhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-ChhHHHHHHHHHHHHHHHHHH
Q 009816 428 SADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-SWTAVFTMLMAAALISGLLLT 493 (524)
Q Consensus 428 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~ 493 (524)
.+..+ ++.++++.|+.++..++|.+++|.+.|++.|. +|+..|+..+++.+++.+...
T Consensus 363 ~~~~~--------~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~ 421 (434)
T PRK11663 363 AECSH--------KEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLL 421 (434)
T ss_pred Hhccc--------HhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 44444 47789999999999999999999999999997 999999988888777665544
No 5
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=1.6e-38 Score=314.71 Aligned_cols=396 Identities=17% Similarity=0.245 Sum_probs=290.3
Q ss_pred ccchhhHHHHHHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhhH
Q 009816 33 KNHQAIVLIVTFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTALL 112 (524)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 112 (524)
++.+|.++.+++++++.+++|+.+++.+.|.+.+| +|++. .+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~------------------------------~~~s~-------~~~ 45 (412)
T TIGR02332 3 KKLFRRLIIFLFILFIFSFLDRINIGFAGLTMGKD------------------------------LGLSA-------TMF 45 (412)
T ss_pred eeehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhh------------------------------cCCCH-------HHH
Confidence 35678899999999999999999999999999888 88887 999
Q ss_pred hHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHHH
Q 009816 113 GELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVAV 192 (524)
Q Consensus 113 g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~ 192 (524)
|++.+++.+++.+++++.|+++||+|||+++..++++++++.++++++ ++++.+++.|+++|++.+...|....+
T Consensus 46 g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~r~l~G~~~~~~~~~~~~~ 120 (412)
T TIGR02332 46 GLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFA-----TGPESLYLLRILVGIAEAGFLPGILLY 120 (412)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHh-----cCHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 999999999999999999999999999999999999999999999997 899999999999999999999999999
Q ss_pred HhhccccccccceehhhhhhhhhHHHHHHHHHHHhhh-------cCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCC
Q 009816 193 VGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALLT-------YGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDT 265 (524)
Q Consensus 193 i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~-------~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (524)
+.|++|+++|++++++++.+.++|.++++.+++.+.. .|||+.|++.+++.++..++.++++||+|++.....
T Consensus 121 ~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~ 200 (412)
T TIGR02332 121 LTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLD 200 (412)
T ss_pred HHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCC
Confidence 9999999999999999999999999999999988752 599999999988888877777888898886532111
Q ss_pred ccccccCCc--cccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCC
Q 009816 266 NEEDESLSP--KKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYL 343 (524)
Q Consensus 266 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 343 (524)
+++++.... +.+....+.+....++...+....+++ +++|.+|...+..++.....+.+.+|+|.|+++. ..++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~---~~~~ 276 (412)
T TIGR02332 201 EEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLRE-IFTPAIMLYTLAYFCLTNTLSAINIWTPQILQSF---NQGS 276 (412)
T ss_pred HHHHHHHHHHHHhccccccccccccccccccHHHHHHH-hcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCC
Confidence 111110000 000000000000000000011122333 3457788777777777778888999999999873 1467
Q ss_pred ChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHH-HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHH
Q 009816 344 SSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAIT-AASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYAL 422 (524)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 422 (524)
+..+++.......++.+++.++.|+++||+++|+.. ........+.. .+... ..+....+....+.+++.....+.
T Consensus 277 s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~ 353 (412)
T TIGR02332 277 SNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGW-LLASA--TDHNLIQLLGIIMASMGSFSAMAI 353 (412)
T ss_pred cHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHH-HHHHh--cCCHHHHHHHHHHHHHHhhhhhhH
Confidence 888899999999999999999999999999877753 33333333222 22211 112222222222222222222122
Q ss_pred HHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc--ChhHHHHHHHHHH
Q 009816 423 ITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT--SWTAVFTMLMAAA 485 (524)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~--~~~~~~~~~~~~~ 485 (524)
......+..| ++.++++.|+.+...++|++++|.+.|.+.|. +|+..+++.+++.
T Consensus 354 ~~~~~~~~~~--------~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~~ 410 (412)
T TIGR02332 354 FWTTPDQSIS--------LQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAALL 410 (412)
T ss_pred HHhhcccccc--------hHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHHH
Confidence 2122222233 47789999999999999999999999999997 5888887766543
No 6
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=7e-37 Score=301.87 Aligned_cols=339 Identities=15% Similarity=0.131 Sum_probs=270.2
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQML 177 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l 177 (524)
+|+++ .+.|++.+.+.+++.++++++|+++||+|||+++..+.++.++++++++++ ++++.+++.|++
T Consensus 39 ~~~s~-------~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~r~~ 106 (390)
T PRK03545 39 FHMQT-------AQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALA-----WNFTVLLISRIG 106 (390)
T ss_pred cCCCH-------HHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHh-----ccHHHHHHHHHH
Confidence 88887 999999999999999999999999999999999999999999999999997 999999999999
Q ss_pred HHHhhhcchhhHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHHhcCC
Q 009816 178 AGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFLFLPV 256 (524)
Q Consensus 178 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~ 256 (524)
+|++.+...+...+++.|++|+++|++++++...+.++|..++|++++.+. .+|||+.|++.+++.++..+..+..+|+
T Consensus 107 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~ 186 (390)
T PRK03545 107 IAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPL 186 (390)
T ss_pred HHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 999999889999999999999999999999999999999999999999887 5799999999998887776666666665
Q ss_pred CCCCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 009816 257 NPESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHT 336 (524)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (524)
.+++++ + ...+..+.+++|.++......++.....+....+++.++++.
T Consensus 187 ~~~~~~----~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 235 (390)
T PRK03545 187 LPSEHS----G---------------------------SLKSLPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQV 235 (390)
T ss_pred CCCCCc----c---------------------------hHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 432110 0 011235678888887766666665556666667788888876
Q ss_pred ccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhh
Q 009816 337 AVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFV 416 (524)
Q Consensus 337 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 416 (524)
+|.+..+++.+....+++.++++++.+++.||.++|+.. .+..+.......+... ..+.+..++..++.|++.
T Consensus 236 ----~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l~~~--~~~~~~~~~~~~l~g~~~ 308 (390)
T PRK03545 236 ----AGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLLLPA--ANSEWHLSVLSIFWGIAI 308 (390)
T ss_pred ----cCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHHHHH--hchHHHHHHHHHHHHHHH
Confidence 789999999999999999999999999999999877643 3333333333322221 234455556666777776
Q ss_pred hhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-ChhHHHHHHHHHHHHHHHHHHHH
Q 009816 417 NGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-SWTAVFTMLMAAALISGLLLTRL 495 (524)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~ 495 (524)
....+.....+.+..| +.++++.|+.+...++|..+||.+.|++.|. +++..|...+.+.+++.+.....
T Consensus 309 ~~~~~~~~~~~~~~~~---------~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 379 (390)
T PRK03545 309 MCIGLAMQVKVLKLAP---------DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILI 379 (390)
T ss_pred hcchHHHHHHHHHhCC---------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHH
Confidence 5555555555554432 4568999999999999999999999999998 99999988888777766665433
No 7
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=3e-37 Score=311.71 Aligned_cols=421 Identities=16% Similarity=0.179 Sum_probs=299.4
Q ss_pred cccchhhHHHHHHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhh
Q 009816 32 FKNHQAIVLIVTFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTAL 111 (524)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 111 (524)
..+.||.+..++++++.+++.||.+++...+.+.++.+++++...... +..+. ....+++++. .+
T Consensus 13 ~~~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~-----~~~~~---~~~~~~~~s~-------~~ 77 (465)
T TIGR00894 13 FCSFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAE-----NELDN---IKNPNFKWSG-------AL 77 (465)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccc-----ccccc---ccCCCCCCCH-------HH
Confidence 457889999999999999999999999999988764222111100000 00000 0011245554 99
Q ss_pred HhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHH
Q 009816 112 LGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVA 191 (524)
Q Consensus 112 ~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~ 191 (524)
.|++.+.+.+++.+++++.|+++||+|||+++..+.++++++.+++.++. ..+++.+++.|+++|++.+...+....
T Consensus 78 ~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~---~~~~~~l~~~r~~~G~~~~~~~~~~~~ 154 (465)
T TIGR00894 78 QGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAA---GGGIALVVFCRVIQGLAQGSVSPATHK 154 (465)
T ss_pred hhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHH---HcCchHHHHHHHHHHHhcccchhhHHH
Confidence 99999999999999999999999999999999999999999888875430 146788999999999999999999999
Q ss_pred HHhhccccccccceehhhhhhhhhHHHHHHHHHHHhh-h-cCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCcccc
Q 009816 192 VVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL-T-YGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNEED 269 (524)
Q Consensus 192 ~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~-~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (524)
+++|++|+++|++++++...+..+|.+++|++++.+. . .|||++|++.++++++..++.+.+.+|+|+.+...+++++
T Consensus 155 ~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 234 (465)
T TIGR00894 155 IIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCISKFEK 234 (465)
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCCCCHHHH
Confidence 9999999999999999999999999999999999887 4 3999999999988887766666667776654332221111
Q ss_pred ccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhh
Q 009816 270 ESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAG 349 (524)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 349 (524)
+..... . +++....+.+..+++.++++.+|...+..++.....+.+..|+|.|+++. +|++..+.+
T Consensus 235 ~~i~~~--~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~----~g~s~~~~g 300 (465)
T TIGR00894 235 KYINSS--L--------QGQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWV----LRVSGKENG 300 (465)
T ss_pred HHHHhh--c--------ccccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----hCcChHHhH
Confidence 100000 0 00000011223477889999999999998888888889999999999887 799999999
Q ss_pred hHHHHHHHHHHhhhHHHHHHHhhhhhhHHH--------HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhH
Q 009816 350 NLSTLFDVGGVLGGILAGHISDRLDARAIT--------AASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYA 421 (524)
Q Consensus 350 ~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 421 (524)
+..++..++.+++.++.|+++||+++|+.. ..+..........+.......+....++.+.+.+.+.+...+
T Consensus 301 ~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 380 (465)
T TIGR00894 301 LLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLA 380 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhh
Confidence 999999999999999999999998654211 111111111111111111112333333344444444333333
Q ss_pred HHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc----ChhHHHHHHHHHHHHHHHHHH
Q 009816 422 LITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT----SWTAVFTMLMAAALISGLLLT 493 (524)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~----~~~~~~~~~~~~~~~~~~~~~ 493 (524)
.......+.. ++.+|.+.|+.+..+.+++.++|.+.|++.+. +|...|.+.+++.+++.++..
T Consensus 381 ~~~~~~~~~~---------~~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~ 447 (465)
T TIGR00894 381 GVLINSLDLA---------PRFLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYL 447 (465)
T ss_pred hhhhchhhcC---------hhHHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHee
Confidence 3322222222 36789999999999999999999999998765 377788887777766655444
No 8
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=2e-36 Score=303.84 Aligned_cols=411 Identities=21% Similarity=0.384 Sum_probs=292.9
Q ss_pred cccchhhHHHHHHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhh
Q 009816 32 FKNHQAIVLIVTFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTAL 111 (524)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 111 (524)
.++++|.++...++.+...+.++..++...|.+.++ |++. .+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-------------------------------g~s~-------~~ 64 (452)
T PRK11273 23 YRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-------------------------------GFSR-------GD 64 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-------------------------------CCCH-------HH
Confidence 455677777777888888899988888888876533 4444 88
Q ss_pred HhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHH
Q 009816 112 LGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVA 191 (524)
Q Consensus 112 ~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~ 191 (524)
.|++.+.+.+++.++++++|+++||+|||++++++.++.+++.++++++.. ...+++.+++.|++.|++.+..++....
T Consensus 65 ~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~l~gi~~g~~~~~~~~ 143 (452)
T PRK11273 65 LGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPW-ATSSIAVMFVLLFLCGWFQGMGWPPCGR 143 (452)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhc-ccccHHHHHHHHHHHHHHHhccchHHHH
Confidence 999999999999999999999999999999999999999999988877410 0137888999999999999998898888
Q ss_pred HHhhccccccccceehhhhhhhhhHHH-HHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCcccc
Q 009816 192 VVGNWFGKSKRGLIMGIWNAHTSIGNI-TGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNEED 269 (524)
Q Consensus 192 ~i~~~~~~~~r~~~~~~~~~~~~~G~~-ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (524)
.+.+++|+++|+++++++..+..+|.. .+|+++..+. ..+||+.|++.+++.++..++..+++||+|++...++.++.
T Consensus 144 ~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 223 (452)
T PRK11273 144 TMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEY 223 (452)
T ss_pred HHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCChhhh
Confidence 999999999999999999999999864 4565543333 45999999999888888777788888887664322111110
Q ss_pred ccCCccccCCCcccccccchhhhhhhhhh-HHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhh
Q 009816 270 ESLSPKKIGEGVTQPLLRRETKIEEKAVG-FIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMA 348 (524)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 348 (524)
+... .++.+. +++++ .+.... ....+++|.+|...+..++.....+....++|.|+++. +|++..++
T Consensus 224 ~~~~-~~~~~~------~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~----~g~s~~~~ 291 (452)
T PRK11273 224 KNDY-PDDYNE------KHEQE-LTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEV----KHFALDKS 291 (452)
T ss_pred hhcc-cccccc------ccCCC-ccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----cCCCHHHH
Confidence 0000 000000 00000 000111 23467889999888888888777788889999999987 68999999
Q ss_pred hhHHHHHHHHHHhhhHHHHHHHhhh--hhhHHHHH-HHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHH
Q 009816 349 GNLSTLFDVGGVLGGILAGHISDRL--DARAITAA-SFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITT 425 (524)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~g~l~dr~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 425 (524)
+.......++.+++.++.|+++||+ +||+.... ...+..+....+.. ....+.+..++..++.|.+..........
T Consensus 292 ~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 370 (452)
T PRK11273 292 SWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWL-NPAGNPTVDMACMIVIGFLIYGPVMLIGL 370 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHH-hcccChHHHHHHHHHHHHHHHhHHHHHHH
Confidence 9988888999999999999999999 44443222 22222222222211 11223333334444455543333333334
Q ss_pred HHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhh-hhhhhHhhccc-ChhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 009816 426 AVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAI-GPLLTGYISAT-SWTAVFTMLMAAALISGLLLTRLVVAEVAA 502 (524)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i-~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (524)
...+..| ++.+|++.|+.+....+|+.+ +|.+.|++.|. ||+..|.+++++++++.+......+.|+|+
T Consensus 371 ~~~~~~p--------~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 441 (452)
T PRK11273 371 HALELAP--------KKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRH 441 (452)
T ss_pred HHHHHcC--------hhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhccccch
Confidence 4556665 367899999999988888765 79999999998 999999988888887777666565555444
No 9
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=3.8e-36 Score=298.78 Aligned_cols=378 Identities=21% Similarity=0.287 Sum_probs=293.4
Q ss_pred cchhhHHHHHHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhhHh
Q 009816 34 NHQAIVLIVTFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTALLG 113 (524)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g 113 (524)
+++|.++.++++..+.++++...++...|.+.++ +|+++ .+.|
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------~~~s~-------~~~g 53 (406)
T PRK11551 11 SRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQE------------------------------FGLDV-------AQMG 53 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------------hCCCH-------HHHH
Confidence 5888899999999999999999999999999888 88777 9999
Q ss_pred HHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHHHH
Q 009816 114 ELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVAVV 193 (524)
Q Consensus 114 ~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i 193 (524)
++.+.+.++..+++++.|+++||+|||+++..+.++.+++.++++++ ++++.+++.|++.|++.+...+...+++
T Consensus 54 ~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~G~~~~~~~~~~~~~~ 128 (406)
T PRK11551 54 WAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQA-----WDFPSLLVARLLTGVGLGGALPNLIALT 128 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHh-----ccHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999888886 8999999999999999999999999999
Q ss_pred hhccccccccceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCccccccC
Q 009816 194 GNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNEEDESL 272 (524)
Q Consensus 194 ~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (524)
.|++|+++|++++++...+..+|..+++.+++.+. ..+||+.|++.+++.++..++..+++||+|++...++.++
T Consensus 129 ~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---- 204 (406)
T PRK11551 129 SEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGK---- 204 (406)
T ss_pred HHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcch----
Confidence 99999999999999999999999999999988776 5799999999887777666666677787654321110000
Q ss_pred CccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHH
Q 009816 273 SPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLS 352 (524)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 352 (524)
..+ + ......+..+.+..+......++.....+....++|.|+++ .|+++.+.+...
T Consensus 205 ----~~~----~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-----~g~s~~~~~~~~ 261 (406)
T PRK11551 205 ----QRA----P----------VLRALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVG-----QGLSRSQAGLVQ 261 (406)
T ss_pred ----hhh----h----------hHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CCCChhhhhHHH
Confidence 000 0 00000000111222333344444445566677889999987 499999999999
Q ss_pred HHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhc
Q 009816 353 TLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLG 432 (524)
Q Consensus 353 ~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 432 (524)
....++.++++++.|++.||+++|+.+..+.....++.+.+.. ..+.+...+..++.|++..+..+.......+.+|
T Consensus 262 ~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p 338 (406)
T PRK11551 262 IAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAA---APSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYP 338 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh---cCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcc
Confidence 9999999999999999999999999887755555444433322 2244444555666777777777777788888877
Q ss_pred ccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc--ChhHHHHHHHHHHHHHHHH
Q 009816 433 THSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT--SWTAVFTMLMAAALISGLL 491 (524)
Q Consensus 433 ~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~--~~~~~~~~~~~~~~~~~~~ 491 (524)
+ +.++++.|+.+....+|..++|.+.|++.+. ++...++....+.+++.+.
T Consensus 339 ~--------~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 391 (406)
T PRK11551 339 T--------QVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALA 391 (406)
T ss_pred h--------hhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHH
Confidence 4 6679999999999999999999999999987 4555555554444444333
No 10
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=5.8e-36 Score=303.23 Aligned_cols=389 Identities=16% Similarity=0.147 Sum_probs=270.2
Q ss_pred hhHHHHHHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhhHhH--
Q 009816 37 AIVLIVTFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTALLGE-- 114 (524)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~-- 114 (524)
+.++...+++++..++|...++.+.|.+.++ ++.+. +......+.
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~------------------------------~~~~~---~~~~~~~~~~~ 61 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKV------------------------------FFPGA---DPSVQMIAALA 61 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------------------------------hCCCC---CcHHHHHHHHH
Confidence 4566777889999999999999999988877 43221 110111222
Q ss_pred HHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHH--------HHHHHHHHHHhhhcch
Q 009816 115 LDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYY--------YLVVQMLAGLFQSTGW 186 (524)
Q Consensus 115 ~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~--------~~~~r~l~G~~~~~~~ 186 (524)
+.++.++++.++++++|+++||+|||+++.++++++++++++++++ +++.. +++.|+++|++.|..+
T Consensus 62 ~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~-----~~~~~~g~~a~~~l~~~R~l~G~g~g~~~ 136 (490)
T PRK10642 62 TFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLI-----PSYATIGIWAPILLLLCKMAQGFSVGGEY 136 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhc-----ccHHHHHHHHHHHHHHHHHHHHhHhHhhH
Confidence 2578889999999999999999999999999999999999999997 78764 8899999999999999
Q ss_pred hhHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhh---------hcCchhHHHHhHHHHHHHHHHHHHhcCCC
Q 009816 187 PSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL---------TYGWGWSFVVPGLIIAFVGLIVFLFLPVN 257 (524)
Q Consensus 187 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~---------~~gwr~~f~~~~~~~~~~~~~~~~~~~~~ 257 (524)
+...+++.|++|+++|+++.++...+..+|..+|+.+...+. ++|||++|++.+++.++ +++....+||+
T Consensus 137 ~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~-~~~~~~~~~es 215 (490)
T PRK10642 137 TGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGII-GLYLRHALEET 215 (490)
T ss_pred HHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHH-HHHHHHcCCCC
Confidence 999999999999999999999999888888888876654432 47999999997655543 45556678887
Q ss_pred CCCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcC-CCcHHHH-HHHHHHHHHHHHHHHHHHHHHhh
Q 009816 258 PESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKI-PGVAPFA-LCLFFAKLVAYTFLYWLPFYVSH 335 (524)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 335 (524)
|++....++.++... + .. . +++..++++++++ ++.+... ...++....++....++|.|+++
T Consensus 216 p~~~~~~~~~~~~~~----~--~~-----~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~ 279 (490)
T PRK10642 216 PAFQQHVDKLEQGDR----E--GL-----Q-----DGPKVSFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSH 279 (490)
T ss_pred hhHHHHHHhhhhhcc----c--cc-----c-----ccccCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 764321110000000 0 00 0 0011123333332 2222222 22334456677788899999987
Q ss_pred cccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhh
Q 009816 336 TAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMF 415 (524)
Q Consensus 336 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 415 (524)
. +|++..+.++......++.+++.++.|+++||+|||+.+..+.....+....+.......+....++..++.+++
T Consensus 280 ~----~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 355 (490)
T PRK10642 280 N----LHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVI 355 (490)
T ss_pred h----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 6 789888888887888888999999999999999999987776654433322222111223334444455556666
Q ss_pred hhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc--ChhHHHHHHHHHHHHHHHHH
Q 009816 416 VNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT--SWTAVFTMLMAAALISGLLL 492 (524)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~--~~~~~~~~~~~~~~~~~~~~ 492 (524)
.+...+.......+.+| ++.|+++.|+......+++.++|.+.+++.+. ++...+++..+.++++.+..
T Consensus 356 ~~~~~g~~~~~~~~~~p--------~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~ 426 (490)
T PRK10642 356 LNCFTGVMASTLPAMFP--------THIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITG 426 (490)
T ss_pred HHHHHHHHHHHHHHHCC--------CccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHH
Confidence 55555666666777776 46789999976666777788999999998875 35555555544444444433
No 11
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=100.00 E-value=2.3e-35 Score=287.07 Aligned_cols=390 Identities=13% Similarity=0.045 Sum_probs=294.9
Q ss_pred cccchhhHHHHHHHHHHHHHhhcccccccccccCC-CCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchh
Q 009816 32 FKNHQAIVLIVTFFAYTSYHAARKTTSIVKSTLDP-QSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTA 110 (524)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 110 (524)
-++..++.+.+.++++++.+..+..++++.+.+.+ + +|+++ +
T Consensus 28 ~~~~a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~------------------------------~~ls~-------~ 70 (462)
T PRK15034 28 GKHIARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIG------------------------------FNFTT-------D 70 (462)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh------------------------------cCCCH-------H
Confidence 34455678888999999999999999999888766 6 88887 9
Q ss_pred hHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHH
Q 009816 111 LLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVV 190 (524)
Q Consensus 111 ~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~ 190 (524)
|.+++.+++.+++.++.++.|++.||+|.|+++.++.++.++.+++.+++..+..++++.+++.|++.|++ +..++...
T Consensus 71 q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~ 149 (462)
T PRK15034 71 QLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSM 149 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHH
Confidence 99999999999999999999999999999999999999999999988874111126999999999999998 66889999
Q ss_pred HHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhh-------------------hcCchhHHHHhHHHHHHHHHHHH
Q 009816 191 AVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL-------------------TYGWGWSFVVPGLIIAFVGLIVF 251 (524)
Q Consensus 191 ~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-------------------~~gwr~~f~~~~~~~~~~~~~~~ 251 (524)
..+++|+|+++||+++|+.....++|..+++++...+. ..+||.++++..++.++.+++.+
T Consensus 150 ~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~ 229 (462)
T PRK15034 150 GNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAW 229 (462)
T ss_pred HHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999997777777766655543322 12377888888887777777777
Q ss_pred HhcCCCCCCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHH
Q 009816 252 LFLPVNPESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPF 331 (524)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (524)
+++++.++.+. .....+..+|+|+.|.+.+.+++.+..+.++..++|.
T Consensus 230 ~~~~~~~~~~~--------------------------------~~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~ 277 (462)
T PRK15034 230 SGMNDIASSRA--------------------------------SIADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAM 277 (462)
T ss_pred HhCCCcccccc--------------------------------CHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 76555332100 1223467899999999999999998888889999999
Q ss_pred HHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcc---hhHHHHHHH
Q 009816 332 YVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGH---LSLALNIAL 408 (524)
Q Consensus 332 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 408 (524)
|+++. + +.........+..+...+.++++|+++||+|+++.+.++++.+.+.........+. .+.+...+.
T Consensus 278 ~~~~~----~--~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~ 351 (462)
T PRK15034 278 LAKTQ----F--PDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAV 351 (462)
T ss_pred HHHHH----c--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHH
Confidence 99875 3 33333233344567788889999999999999999988887666665443332222 234444444
Q ss_pred HHHHHhhhhhhhHHHHHHHHhhhccc-------------ccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc--C
Q 009816 409 MFITGMFVNGPYALITTAVSADLGTH-------------SSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT--S 473 (524)
Q Consensus 409 ~~~~g~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~--~ 473 (524)
++...++.+.......-.+++.+++. ++....++..|.+.|+....+.+|+.+-|.+.|...+. +
T Consensus 352 ~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~ 431 (462)
T PRK15034 352 FMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGS 431 (462)
T ss_pred HHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCC
Confidence 44444455555555555666655520 01111123678999999999999999999999988877 7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHH
Q 009816 474 WTAVFTMLMAAALISGLLLTRLVV 497 (524)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~ 497 (524)
+...|+...+..+++.++.+..+.
T Consensus 432 ~~~~~~~~~~~~~~~~~~~w~~y~ 455 (462)
T PRK15034 432 PVGAMKVFLIFYIVCVLLTWLVYG 455 (462)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhc
Confidence 888899988888888777765543
No 12
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=6.5e-36 Score=303.05 Aligned_cols=382 Identities=18% Similarity=0.190 Sum_probs=303.3
Q ss_pred chhhHHHHHHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhhHhH
Q 009816 35 HQAIVLIVTFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTALLGE 114 (524)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~ 114 (524)
++|.++..++++++....|.+.+++..|.+.+| +|.+. .+.+|
T Consensus 3 ~~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~------------------------------l~~s~-------~~~~~ 45 (495)
T PRK14995 3 RQWLTLVIIVLVYIPVAIDATVLHVAAPTLSMT------------------------------LGASG-------NELLW 45 (495)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------------hCCCH-------hHHHH
Confidence 367888999999999999999999999999988 88777 89999
Q ss_pred HHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHHHHh
Q 009816 115 LDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVAVVG 194 (524)
Q Consensus 115 ~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~ 194 (524)
+.+.|.+++.++.+++|+++||+|||++++.+.+++++++++++++ ++++.++++|+++|++.+...+.....+.
T Consensus 46 ~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a-----~~~~~li~~r~l~G~g~~~~~~~~~~~l~ 120 (495)
T PRK14995 46 IIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFS-----PTASWLIATRALLAIGAAMIVPATLAGIR 120 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999997 99999999999999999999898888887
Q ss_pred hcc-ccccccceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCccccccC
Q 009816 195 NWF-GKSKRGLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNEEDESL 272 (524)
Q Consensus 195 ~~~-~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (524)
+++ |+++|+++++++.....+|..+||.+++++. ++||||.|++...+.++..++..+++|+.+++..+ +.+.....
T Consensus 121 ~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~-~~d~~g~~ 199 (495)
T PRK14995 121 ATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQ-PLNLGHAL 199 (495)
T ss_pred HHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCC-CCChHhHH
Confidence 776 6789999999999999999999999999998 57999999998888887777777778875533211 11100000
Q ss_pred ------------CccccCCCcccc---------------cccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHH
Q 009816 273 ------------SPKKIGEGVTQP---------------LLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTF 325 (524)
Q Consensus 273 ------------~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (524)
..+......... ....+.+ .+.+....+++|+|.++...+..++.....++.
T Consensus 200 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~-~~~p~~~~~lf~~~~~~~~~~~~~~~~~~~~~~ 278 (495)
T PRK14995 200 MLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIRTQLA-ASRPMIDMRLFTHRIILSGVVMAMTAMITLVGF 278 (495)
T ss_pred HHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhc-CCCCCcCHHHhCCcccHHHHHHHHHHHHHHHHH
Confidence 000000000000 0000111 111222246789999888888888877778888
Q ss_pred HHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHH
Q 009816 326 LYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALN 405 (524)
Q Consensus 326 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (524)
..++|.|++.. +|+++.++|+......++..++.++.|++.||+++|+.+..+..+..++...+.......+.+..
T Consensus 279 ~~~~~~~lq~v----~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~ 354 (495)
T PRK14995 279 ELLMAQELQFV----HGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQA 354 (495)
T ss_pred HHHHHHHHHHH----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHH
Confidence 88999999998 89999999999999999999999999999999999988877776666555444332223344445
Q ss_pred HHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc
Q 009816 406 IALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT 472 (524)
Q Consensus 406 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 472 (524)
....++.|++.+...+.......+..| ++.++.+.++.++...+|+.+|+.+.|.+.+.
T Consensus 355 ~~~~~l~G~g~g~~~~~~~~~~~~~~~--------~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~~ 413 (495)
T PRK14995 355 WGLMALLGFSAASALLASTSAIMAAAP--------PEKAAAAGAIETMAYELGAGLGIAIFGLLLSR 413 (495)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHhcCC--------HHhcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566777888888888777777777776 36679999999999999999999999988654
No 13
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=100.00 E-value=1.4e-35 Score=297.04 Aligned_cols=395 Identities=15% Similarity=0.152 Sum_probs=293.6
Q ss_pred cccchhhHHHHHHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhh
Q 009816 32 FKNHQAIVLIVTFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTAL 111 (524)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 111 (524)
...++|.++..+++....++.++..++...|.+.++ +|++. .+
T Consensus 13 ~~~~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~------------------------------~g~s~-------~~ 55 (455)
T TIGR00892 13 DGGWGWVVLGATFVSIGFSYAFPKAVTVFFKELQQI------------------------------FQATY-------SE 55 (455)
T ss_pred CCCcchHHHHHHHHHHHHHHhhhcchhhhHHHHHHH------------------------------hCcch-------hH
Confidence 346689888888888888888888889999999888 88887 89
Q ss_pred HhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHH-HHHHHHHhhhcchhhHH
Q 009816 112 LGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLV-VQMLAGLFQSTGWPSVV 190 (524)
Q Consensus 112 ~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~-~r~l~G~~~~~~~~~~~ 190 (524)
.+++.+.+.++..++.+++|+++||+|||++++.+.++.+++.++++++ ++++.+++ .|++.|++.+...+...
T Consensus 56 ~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~~~~l~G~~~~~~~~~~~ 130 (455)
T TIGR00892 56 TAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFS-----SNVIELYLTAGFITGLGLAFNFQPSL 130 (455)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHh-----hhHHHHHHHHHHHHHhcchhhhhHHH
Confidence 9999999999999999999999999999999999999999999999887 88888765 57999999987777778
Q ss_pred HHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCcccc
Q 009816 191 AVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNEED 269 (524)
Q Consensus 191 ~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (524)
+++.++++ ++|+++.++...+..+|..++|++++.+. .+|||++|++.+++.++..+..++..++.+..+..+.++++
T Consensus 131 ~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 209 (455)
T TIGR00892 131 TMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSKE 209 (455)
T ss_pred HHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCCCCcccccccccccc
Confidence 88999996 78999999999999999999999998887 57999999999988776655444443332211100000000
Q ss_pred ccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhh
Q 009816 270 ESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAG 349 (524)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 349 (524)
.. . .... .++...+...+ +.......+.+++|.++......++.....+....++|.|+++ .|++..+++
T Consensus 210 ~~-~--~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-----~g~s~~~~g 279 (455)
T TIGR00892 210 GL-P--PDGS-TKKLSKKSTAE-KINRFLDFSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKD-----KGVDEYEAA 279 (455)
T ss_pred cC-C--CCCc-cccccccchhh-hhhhhcchHHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHH-----cCCCHHHHH
Confidence 00 0 0000 00000000000 0001111357788988888777777777777778899999877 499999999
Q ss_pred hHHHHHHHHHHhhhHHHHHHHhhh--hhhHHHHHHH--HHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHH
Q 009816 350 NLSTLFDVGGVLGGILAGHISDRL--DARAITAASF--MYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITT 425 (524)
Q Consensus 350 ~~~~~~~~~~~~~~~~~g~l~dr~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 425 (524)
.+.++.+++.++++++.|++.||. ++++...+.. ....+..+... ...+.+..++..++.|++.+...+....
T Consensus 280 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~---~~~~~~~~~i~~~~~G~~~g~~~~~~~~ 356 (455)
T TIGR00892 280 FLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCA---LAGDYTGLVIYCIFFGLSFGSVGALLFE 356 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHH---HhchHHHHHHHHHHHHHHhchHHHHHHH
Confidence 999999999999999999999973 3343333222 22222222221 1234555666777888888888888888
Q ss_pred HHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc--ChhHHHHHHHHHHHHHHH
Q 009816 426 AVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT--SWTAVFTMLMAAALISGL 490 (524)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~--~~~~~~~~~~~~~~~~~~ 490 (524)
.+.+.+++ +.++++.|+.+....+|..++|.+.|.+.|. +|+..|++.+++.+++.+
T Consensus 357 ~~~~~~~~--------~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 357 VLMDLVGA--------QRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred HHHHHhhH--------HHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 88887773 6679999999999999999999999999987 588888888777665544
No 14
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=1.7e-35 Score=295.51 Aligned_cols=380 Identities=13% Similarity=0.066 Sum_probs=263.7
Q ss_pred cchhhHHHHHHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhhH-
Q 009816 34 NHQAIVLIVTFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTALL- 112 (524)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~- 112 (524)
++++..+...+++++.+++|+..++.+.|.+.++ ++.+. . +..+.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~------------------------------~~~~~--~--~~~~~~ 63 (432)
T PRK10406 18 RRRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHI------------------------------FFPSG--N--TTTQLL 63 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------------hCCCC--C--chHHHH
Confidence 4566677777889999999999999999998888 43211 0 11433
Q ss_pred --hHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhH--------HHHHHHHHHHHHhh
Q 009816 113 --GELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSF--------YYYLVVQMLAGLFQ 182 (524)
Q Consensus 113 --g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~--------~~~~~~r~l~G~~~ 182 (524)
+.+.+...++..++++++|+++||+|||+++..+.+++++++++++++ +++ ..+++.|+++|++.
T Consensus 64 ~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~R~l~G~g~ 138 (432)
T PRK10406 64 QTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACL-----PGYETIGTWAPALLLLARLFQGLSV 138 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhc-----CCchhHHHHHHHHHHHHHHHHHhhh
Confidence 334455555666999999999999999999999999999999999987 554 46899999999999
Q ss_pred hcchhhHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhh---------hcCchhHHHHhHHHHHHHHHHHHHh
Q 009816 183 STGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL---------TYGWGWSFVVPGLIIAFVGLIVFLF 253 (524)
Q Consensus 183 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~---------~~gwr~~f~~~~~~~~~~~~~~~~~ 253 (524)
|..++...+++.|++|+++|+++.++.+.+...|.++++.+...+. .+|||++|++.+++.++. +.....
T Consensus 139 g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~-~~~~~~ 217 (432)
T PRK10406 139 GGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVA-LWLRRQ 217 (432)
T ss_pred hhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH-HHHHhc
Confidence 9999999999999999999999999998888888888887665543 479999999877766544 334444
Q ss_pred cCCCCCCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHH-HHHHHHHHHHHHHH
Q 009816 254 LPVNPESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFA-KLVAYTFLYWLPFY 332 (524)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 332 (524)
+||+++++.+ . . ++..++++++++++.+...+...+. ...++....|+|.|
T Consensus 218 ~~e~~~~~~~------~--~--------------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~ 269 (432)
T PRK10406 218 LDETSQQETR------A--L--------------------KEAGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKY 269 (432)
T ss_pred CCCCchHHHh------h--h--------------------cccccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5554332100 0 0 0011345667777776665554443 56677788999999
Q ss_pred HhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHH-hhcchhHHHHHHHHHH
Q 009816 333 VSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYR-SYGHLSLALNIALMFI 411 (524)
Q Consensus 333 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 411 (524)
+++. +|++..+.+....+..+...++.++.|+++||++||+.+.....+..+....+.. .....+....+....+
T Consensus 270 l~~~----~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (432)
T PRK10406 270 LVNT----AGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMC 345 (432)
T ss_pred HHHh----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHH
Confidence 9876 7999988888888888888888999999999999998876655543333222211 1111222222222222
Q ss_pred HHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhh-hhhhhhhhhHhhcccC-hhHHHHHHHHHHHHHH
Q 009816 412 TGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSV-GAAIGPLLTGYISATS-WTAVFTMLMAAALISG 489 (524)
Q Consensus 412 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~i~~~~~g~l~~~~-~~~~~~~~~~~~~~~~ 489 (524)
..+..+...+.......+.+|+ +.|+++.|+.+...++ .+...|.+.+.+.+.+ +...+++.++..+++.
T Consensus 346 ~~~~~~~~~~~~~~~~~e~fp~--------~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~~g~~~~~~~~~~~~~~i~~ 417 (432)
T PRK10406 346 ALLIVSFYTSISGILKAEMFPA--------QVRALGVGLSYAVANALFGGSAEYVALSLKSIGMETAFFWYVTLMAVVAF 417 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHCCC--------CccchhhhHHHHHHHHHHHhHHHHHHHHHHHhCCCcHHHHHHHHHHHHHH
Confidence 2222233334455666777774 6789999998877664 3555778777664443 5555555555555544
Q ss_pred HHHH
Q 009816 490 LLLT 493 (524)
Q Consensus 490 ~~~~ 493 (524)
+..+
T Consensus 418 ~~~~ 421 (432)
T PRK10406 418 LVSL 421 (432)
T ss_pred HHHH
Confidence 4433
No 15
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=100.00 E-value=1.7e-35 Score=298.09 Aligned_cols=386 Identities=16% Similarity=0.148 Sum_probs=274.8
Q ss_pred cccchhhHHHHHHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhh
Q 009816 32 FKNHQAIVLIVTFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTAL 111 (524)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 111 (524)
.++++++.+...+.+++..+.+...+++..|.+.++ +|++. ++
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~------------------------------~gls~-------~~ 72 (476)
T PLN00028 30 FARPHMRAFHLSWISFFTCFVSTFAAAPLLPIIRDN------------------------------LNLTK-------SD 72 (476)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------------cCCCH-------HH
Confidence 344456666777777788888888888888888888 88877 89
Q ss_pred HhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHH
Q 009816 112 LGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVA 191 (524)
Q Consensus 112 ~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~ 191 (524)
.+++.+.+.+++.+++++.|+++||+|||+++..+.++++++.++++++ ++++.+++.|++.|++.+.. +....
T Consensus 73 ~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~-----~s~~~l~~~r~l~G~~~~~~-~~~~~ 146 (476)
T PLN00028 73 IGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLV-----SSATGFIAVRFFIGFSLATF-VSCQY 146 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHh-----cCHHHHHHHHHHHHHHHHhh-HHHHH
Confidence 9999999999999999999999999999999999999999999989886 89999999999999998765 44567
Q ss_pred HHhhccccccccceehhhhhhhhhHHHHHHHHHHHhh----h------cCchhHHHHhHHHHHHHHHHHHHhcCCCCCCC
Q 009816 192 VVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL----T------YGWGWSFVVPGLIIAFVGLIVFLFLPVNPESV 261 (524)
Q Consensus 192 ~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~----~------~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (524)
++++++|+++|++++++.....++|..+++.+...+. . .|||+.|++.+++.++..++.+++.++.|+..
T Consensus 147 ~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~~ 226 (476)
T PLN00028 147 WMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPDGN 226 (476)
T ss_pred HHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCCCc
Confidence 8999999999999999998777777777765554432 1 48999999999988877666655544433321
Q ss_pred CCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCC
Q 009816 262 GTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGK 341 (524)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (524)
. ++.. ++.+. +..+....+++.++++++|.+.+..++..........++|.|+.+. +
T Consensus 227 ~----~~~~-----~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~----~ 283 (476)
T PLN00028 227 Y----RELK-----KSGTM----------PKDSFSKVLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDR----F 283 (476)
T ss_pred h----hhHH-----hcCcc----------ccccHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHh----c
Confidence 0 0000 00000 0001123356678889988877776666666667778899998876 7
Q ss_pred CCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhH-----H-H-HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHh
Q 009816 342 YLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARA-----I-T-AASFMYCAIPALFFYRSYGHLSLALNIALMFITGM 414 (524)
Q Consensus 342 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~-----~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 414 (524)
|+++.+++.+.++.+++.++++++.|+++||+++|+ . . .....+..+..+.+ ....+.+..++..++.++
T Consensus 284 g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~---~~~~~~~~~~~~~~l~~~ 360 (476)
T PLN00028 284 GLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWL---GRANSLGAAIVVMILFSI 360 (476)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHh---cccchHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998752 1 1 11111111111111 112233333444445555
Q ss_pred hhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-ChhHHHHHHHHHHHHHHHHHH
Q 009816 415 FVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-SWTAVFTMLMAAALISGLLLT 493 (524)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~ 493 (524)
+.+...+.......+ +. ++.+|++.|+.+..+.+|+.++|.+.+ ..+. +|+..|++.+++.+++.++.+
T Consensus 361 ~~~~~~~~~~~~~~~-~~--------~~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~ 430 (476)
T PLN00028 361 FVQAACGATFGIVPF-VS--------RRSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVA 430 (476)
T ss_pred HHHHhhhhhcccCcc-cC--------hhhchhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHH
Confidence 544444333333332 22 367799999988877788877777655 2233 689999999888887777666
Q ss_pred HHH
Q 009816 494 RLV 496 (524)
Q Consensus 494 ~~~ 496 (524)
+.+
T Consensus 431 ~~~ 433 (476)
T PLN00028 431 FIH 433 (476)
T ss_pred hee
Confidence 554
No 16
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=3.8e-36 Score=309.56 Aligned_cols=414 Identities=18% Similarity=0.215 Sum_probs=302.6
Q ss_pred ccchhhHHHHHHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhhH
Q 009816 33 KNHQAIVLIVTFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTALL 112 (524)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 112 (524)
.+.+|.++++++++++...++...++.++|.+..+ +|++. .+.
T Consensus 162 ~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~------------------------------~gls~-------~~~ 204 (742)
T TIGR01299 162 GRFQWALFFVLGLALMADGVEVFVVGFVLPSAEKD------------------------------LCIPD-------SGK 204 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------------hCCCH-------HHH
Confidence 56788888888999999999999999999998888 78777 899
Q ss_pred hHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHHH
Q 009816 113 GELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVAV 192 (524)
Q Consensus 113 g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~ 192 (524)
+++.+++.++++++++++|+++||+|||+++++++++.+++.++++++ ++++.++++|++.|++.+...+...++
T Consensus 205 g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa-----~s~~~llv~R~l~G~g~g~~~p~~~~~ 279 (742)
T TIGR01299 205 GMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFV-----QGYGFFLFCRLLSGFGIGGAIPIVFSY 279 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH-----hhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999987 899999999999999999999999999
Q ss_pred HhhccccccccceehhhhhhhhhHHHHHHHHHHHhh-h-------------cCchhHHHHhHHHHHHHHHHHHHhcCCCC
Q 009816 193 VGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL-T-------------YGWGWSFVVPGLIIAFVGLIVFLFLPVNP 258 (524)
Q Consensus 193 i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~-------------~gwr~~f~~~~~~~~~~~~~~~~~~~~~~ 258 (524)
+.|++|+++|++.++++..+..+|.++++.++..+. . .+||+.|++.++..+ ..++.++++||+|
T Consensus 280 isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~l-l~ll~~~~lPESP 358 (742)
T TIGR01299 280 FAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCV-FAIGALTFMPESP 358 (742)
T ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHH-HHHHHHHHcCCCH
Confidence 999999999999999999999999999998876654 2 258998888666544 4466778899999
Q ss_pred CCCCCCCccccccCCcc-------ccC-CCc-------------ccccccchhhh---------h------hhhhhHHHH
Q 009816 259 ESVGTDTNEEDESLSPK-------KIG-EGV-------------TQPLLRRETKI---------E------EKAVGFIEA 302 (524)
Q Consensus 259 ~~~~~~~~~~~~~~~~~-------~~~-~~~-------------~~~~~~~~~~~---------~------~~~~~~~~~ 302 (524)
++...+.+.++.....+ +.. .+. ..+..+.+... . .....++++
T Consensus 359 rwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 438 (742)
T TIGR01299 359 RFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRC 438 (742)
T ss_pred HHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHH
Confidence 87544332222111000 000 000 00000000000 0 001123444
Q ss_pred hcCCC---cHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCC-------------------------------C------C
Q 009816 303 WKIPG---VAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDG-------------------------------K------Y 342 (524)
Q Consensus 303 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------~------g 342 (524)
++.+. .+.+.+..++..+.++++..|+|.++.+..... + |
T Consensus 439 f~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (742)
T TIGR01299 439 FNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIG 518 (742)
T ss_pred cCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchhccccccchhhhhccccccccchhhc
Confidence 43322 244555667777889999999998754410000 0 0
Q ss_pred C----------------------------------------------------------------C---------hhhhh
Q 009816 343 L----------------------------------------------------------------S---------SEMAG 349 (524)
Q Consensus 343 ~----------------------------------------------------------------~---------~~~~~ 349 (524)
+ + .....
T Consensus 519 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~ 598 (742)
T TIGR01299 519 LKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIY 598 (742)
T ss_pred ccccccccccccccccceeeccccchhhhccchhhhhccccchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHH
Confidence 0 0 00112
Q ss_pred hHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHh
Q 009816 350 NLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSA 429 (524)
Q Consensus 350 ~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 429 (524)
....+.+++.+++.++.|+++||+|||+++..+.++.+++.+++... .+....++..++.+++.++.++....++++
T Consensus 599 ~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~---~s~~~ll~~~~l~g~~~~~~~~~~~a~~aE 675 (742)
T TIGR01299 599 FVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFG---NSESAMIALLCLFGGLSIAAWNALDVLTVE 675 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH---ccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33556678899999999999999999999988888777776665432 233344555566777777788888888899
Q ss_pred hhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhcccChhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 009816 430 DLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISATSWTAVFTMLMAAALISGLLLTRLVVAEVAA 502 (524)
Q Consensus 430 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (524)
.+|+ +.|++++|+.+....+|.+++|++.+.+.+.+...+|++.+++.++++++...+ +|+++
T Consensus 676 l~Pt--------~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~~~~pf~i~a~~lll~~ll~~~L--PET~~ 738 (742)
T TIGR01299 676 LYPS--------DKRATAFGFLNALCKAAAVLGILIFGSFVGITKAAPILFASAALACGGLLALKL--PDTRG 738 (742)
T ss_pred HcCH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhC--CCCcc
Confidence 8885 678999999999999999999999998877666667777777666655544432 45443
No 17
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=1.4e-35 Score=293.88 Aligned_cols=388 Identities=24% Similarity=0.351 Sum_probs=295.0
Q ss_pred HHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhhHhHHHHHHHHHHHh
Q 009816 46 AYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTALLGELDLAFLSIYAG 125 (524)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~s~~~l~~~~ 125 (524)
+++.+++++..++...|.+.++ +|+++ .+.|++.+++.++..+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~------------------------------~g~s~-------~~~~~~~~~~~~~~~~ 44 (399)
T TIGR00893 2 VTVINYLDRANLSFAAPMLQED------------------------------LGLSA-------AQYGYVFSAFSWGYVV 44 (399)
T ss_pred eehHHHHHHHhhhHhHHHHHHh------------------------------hCCCh-------hhHHHHHHHHHHHHHH
Confidence 3567788889999999998888 88877 8999999999999999
Q ss_pred hhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHHHHhhccccccccce
Q 009816 126 GMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVAVVGNWFGKSKRGLI 205 (524)
Q Consensus 126 ~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 205 (524)
+.+++|+++||+|||+++..+.++.+++.++++++ ++++.+++.|++.|++.+...+...+++.|++|+++|+++
T Consensus 45 ~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~ 119 (399)
T TIGR00893 45 GQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFA-----GAYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATA 119 (399)
T ss_pred HHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHH-----cCHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHH
Confidence 99999999999999999999999999999999997 8999999999999999999999999999999999999999
Q ss_pred ehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCccccccCCccccCCCcccc
Q 009816 206 MGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNEEDESLSPKKIGEGVTQP 284 (524)
Q Consensus 206 ~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (524)
+++......+|.+++|.+++.+. +.+||+.|++.+++.++..++.++..||++++.....++++.... +....+
T Consensus 120 ~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---- 194 (399)
T TIGR00893 120 VSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQKAKWLTEEEKYIVV-GGLLAE---- 194 (399)
T ss_pred HHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecCCCCccccCCHHHHhhcc-hhhccc----
Confidence 99999999999999999999876 679999999988888777666666677665433221111111000 000000
Q ss_pred cccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhH
Q 009816 285 LLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGI 364 (524)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 364 (524)
.+.+++.++.....++.+++|+++...+..++..........+.|.|+++. +|.++.+.+.+.....++.+++.+
T Consensus 195 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 269 (399)
T TIGR00893 195 -QQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQE----RGLSILEAGFMASLPGIVGFIGMI 269 (399)
T ss_pred -cccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH----hcccHHHhhHHHHHHHHHHHHHHH
Confidence 001111112334566788899998888888888888888899999999887 799999999999999999999999
Q ss_pred HHHHHHhhhhhhHH--HHHHHHHHH--HHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCC
Q 009816 365 LAGHISDRLDARAI--TAASFMYCA--IPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGN 440 (524)
Q Consensus 365 ~~g~l~dr~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (524)
+.|++.||+++|+. ......... +...+........+...........+.+..+..+.......+..|
T Consensus 270 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 341 (399)
T TIGR00893 270 LGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGLGAGAIGWALISDNAP-------- 341 (399)
T ss_pred HHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhchhhhhHHHHHHHhhcC--------
Confidence 99999999999862 111111111 111111111111112222333333344434467777778888777
Q ss_pred ccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-C-hhHHHHHHHHHHHHHHHHHH
Q 009816 441 SRALATVTAIIDGTGSVGAAIGPLLTGYISAT-S-WTAVFTMLMAAALISGLLLT 493 (524)
Q Consensus 441 ~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~-~~~~~~~~~~~~~~~~~~~~ 493 (524)
++.++++.|+.+.+..+|..++|.+.|++.|. + ++..+.+.+++.+++.+...
T Consensus 342 ~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 342 GNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred hhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHH
Confidence 36789999999999999999999999999998 6 88888888777766655443
No 18
>PRK03699 putative transporter; Provisional
Probab=100.00 E-value=9.2e-35 Score=286.92 Aligned_cols=378 Identities=17% Similarity=0.174 Sum_probs=290.7
Q ss_pred cchhhHHHHHHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhhHh
Q 009816 34 NHQAIVLIVTFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTALLG 113 (524)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g 113 (524)
..|+++....+++++....+...++...|.+.++ +|+++ ++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~------------------------------~~~s~-------~~~g 45 (394)
T PRK03699 3 SNRIKLTWISFLSYALTGALVIVTGMVMGPIAEY------------------------------FNLPV-------SSMS 45 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHH------------------------------hCCCH-------HHHH
Confidence 3456667777888888888889999999999888 88887 9999
Q ss_pred HHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHHHH
Q 009816 114 ELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVAVV 193 (524)
Q Consensus 114 ~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i 193 (524)
++.+.+.+++.++++++|++.||+|||+++..+.++.+++.++++++ ++++.+++.|+++|++.+...+...+++
T Consensus 46 ~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~-----~~~~~~~~~~~l~G~~~g~~~~~~~~~i 120 (394)
T PRK03699 46 NTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFS-----HSLALFSIAMFVLGVVSGITMSIGTFLI 120 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-----chHHHHHHHHHHHHHhhHhhccchhHHh
Confidence 99999999999999999999999999999999999999999999986 8999999999999999998889999999
Q ss_pred hhccccccccceehhhhhhhhhHHHHHHHHHHHhh--hcCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCcccccc
Q 009816 194 GNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL--TYGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNEEDES 271 (524)
Q Consensus 194 ~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~--~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (524)
.|++|+++|+++++.......+|..++|.+.+.+. ..|||+.|.+.+++.++..++.++ .+.|+..+.++ +
T Consensus 121 ~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~~--~~~p~~~~~~~--~--- 193 (394)
T PRK03699 121 THVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILTLF--SEFPALGKHAP--K--- 193 (394)
T ss_pred hhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHh--cCCccccccCc--c---
Confidence 99999999999999998999999999998887765 369999999988777665443332 22222111000 0
Q ss_pred CCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhH
Q 009816 272 LSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNL 351 (524)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 351 (524)
+ +. + . . +. ..++.++...+..++.....+.+..|+|.|+++. +|+++.+.+.+
T Consensus 194 -~---~~-----~------~---~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~----~g~s~~~~~~~ 246 (394)
T PRK03699 194 -A---DK-----P------V---A----KE-KWGIGVLFLAIAALLYILAQLTFISWVPEYAQKK----FGMSLEDAGNL 246 (394)
T ss_pred -c---cC-----c------c---c----cc-cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----cCCChHHhhHH
Confidence 0 00 0 0 0 00 1134556666666666677778889999999887 79999999999
Q ss_pred HHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhh
Q 009816 352 STLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADL 431 (524)
Q Consensus 352 ~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 431 (524)
.+...++..+++++.+++.||+++|+.+.....+..+...++.. ..+.+...+..++.|++.+..++.......+..
T Consensus 247 ~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~ 323 (394)
T PRK03699 247 VSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVN---TDDPSHLLYAILGLGFFSSAIYTTIITLGSQQT 323 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH---cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999877666555444333322 233344455566777777777666666555544
Q ss_pred cccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-ChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 009816 432 GTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-SWTAVFTMLMAAALISGLLLTRLVVAE 499 (524)
Q Consensus 432 ~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (524)
+ +.++...|......++|..++|.+.|++.|. |++..++..+++.+++.+......+-+
T Consensus 324 ~---------~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (394)
T PRK03699 324 K---------VASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCILLGFVS 383 (394)
T ss_pred c---------CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 3 2235667888888899999999999999988 888888888877776655544444333
No 19
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=2.9e-34 Score=282.55 Aligned_cols=365 Identities=14% Similarity=0.124 Sum_probs=274.3
Q ss_pred cchhhHHHHHHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhhHh
Q 009816 34 NHQAIVLIVTFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTALLG 113 (524)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g 113 (524)
+..|..+..+.++.+............+|.+.++ +|+++ ++.|
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~------------------------------~g~s~-------~~~g 58 (394)
T PRK10213 16 RPNWSAVFSVAFCVACLIIVEFLPVSLLTPMAQD------------------------------LGISE-------GVAG 58 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH------------------------------cCCCH-------HHHH
Confidence 3355554444444443333443444456777777 88887 9999
Q ss_pred HHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHHHH
Q 009816 114 ELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVAVV 193 (524)
Q Consensus 114 ~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i 193 (524)
+..+.+.++..+++++.|+++||+|||++++.+.++.+++.++++++ ++++.+++.|+++|++.+...+...+++
T Consensus 59 ~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~r~l~G~~~g~~~~~~~~~i 133 (394)
T PRK10213 59 QSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFA-----NSFSLLLIGRACLGLALGGFWAMSASLT 133 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHH-----ChHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999886 8999999999999999999999999999
Q ss_pred hhccccccccceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCccccccC
Q 009816 194 GNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNEEDESL 272 (524)
Q Consensus 194 ~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (524)
.|++|+++|++++++...+.++|.+++|++++.+. .+|||+.|++.+++.++..+......||.++++..
T Consensus 134 ~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~~~~~~--------- 204 (394)
T PRK10213 134 MRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLPGEPSH--------- 204 (394)
T ss_pred HHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCCCccccc---------
Confidence 99999999999999999999999999999999988 57999999998877766544444445653311000
Q ss_pred CccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHH-HHHHhhcccCCCCCChhhhhhH
Q 009816 273 SPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWL-PFYVSHTAVDGKYLSSEMAGNL 351 (524)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~ 351 (524)
.....++.+++|.++...+..++.....+....++ |.|.++ +|+++.+.+..
T Consensus 205 ----------------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-----~g~s~~~~g~~ 257 (394)
T PRK10213 205 ----------------------QKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNL-----AGFGVDGLTLV 257 (394)
T ss_pred ----------------------chhHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCChhHHHHH
Confidence 01123467788888877666556555555656665 556554 69999999999
Q ss_pred HHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhh
Q 009816 352 STLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADL 431 (524)
Q Consensus 352 ~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 431 (524)
....+++.+++.++.+++.||.+ |+.+.....+..+..+++... ..+.+......++.|++.+...+...+.+.+..
T Consensus 258 ~~~~~~~~iig~~~~~~l~~r~~-~~~l~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~ 334 (394)
T PRK10213 258 LLSFGIASFVGTSLSSFILKRSV-KLALAGAPLVLAVSALVLTLW--GSDKIVATGVAIIWGLTFALVPVGWSTWITRSL 334 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHHHHHHHHH--hhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHC
Confidence 99999999999999999999954 444333333333332222221 234455556677788888777777777777776
Q ss_pred cccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-ChhHHHHHHHHHHHHH
Q 009816 432 GTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-SWTAVFTMLMAAALIS 488 (524)
Q Consensus 432 ~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~ 488 (524)
++ ..++..++.....++|..+||.+.|++.|. |+...+...+++.++.
T Consensus 335 ~~---------~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~ 383 (394)
T PRK10213 335 AD---------QAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLT 383 (394)
T ss_pred cc---------cHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHH
Confidence 52 235666777778889999999999999997 7777777766554444
No 20
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=7.7e-35 Score=286.89 Aligned_cols=355 Identities=13% Similarity=0.161 Sum_probs=274.1
Q ss_pred ccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhccc
Q 009816 55 KTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLG 134 (524)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~ 134 (524)
..++++.|.+++| +|++. .+.|++.+.+.+++.+++++.|+++
T Consensus 26 ~~~~~~lp~i~~~------------------------------~~~s~-------~~~g~~~s~~~~~~~l~~~~~g~l~ 68 (393)
T PRK09705 26 TSVGPLLPQLRQA------------------------------SGMSF-------SVAALLTALPVVTMGGLALAGSWLH 68 (393)
T ss_pred hccchhHHHHHHH------------------------------hCCCH-------HHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 6777889999988 88887 9999999999999999999999999
Q ss_pred ccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHHHHhhccccccccceehhhhhhhh
Q 009816 135 DRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIWNAHTS 214 (524)
Q Consensus 135 Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ 214 (524)
||+|||+++..+..+++++.++++++ ++++.+++.|+++|++.+...+....++.+++| ++|+++++++..+..
T Consensus 69 dr~G~r~~l~~~~~l~~~~~~~~~~a-----~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~ 142 (393)
T PRK09705 69 QHVSERRSVAISLLLIAVGALMRELY-----PQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALM 142 (393)
T ss_pred HHhCchHHHHHHHHHHHHHHHHHHHC-----cchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHH
Confidence 99999999999999999999999997 999999999999999999999999999999997 789999999999999
Q ss_pred hHHHHHHHHHHHhhh--cCchhHHHHhHHHHHHHHHHHHHhcC-CCCCCCCCCCccccccCCccccCCCcccccccchhh
Q 009816 215 IGNITGSLVASALLT--YGWGWSFVVPGLIIAFVGLIVFLFLP-VNPESVGTDTNEEDESLSPKKIGEGVTQPLLRRETK 291 (524)
Q Consensus 215 ~G~~ig~~l~~~l~~--~gwr~~f~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (524)
.|..+|+.+++.+.+ .+||+.+.+.++..++. +..++... +.|+.++ + + +
T Consensus 143 ~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----~--~------~-------------- 195 (393)
T PRK09705 143 GGGGLGAAITPWLVQHSETWYQTLAWWALPAVVA-LFAWWWQSAREVASSH----K--T------T-------------- 195 (393)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH-HHHHHHHhcCCCcccc----C--C------C--------------
Confidence 999999999988774 38999887766654443 32333222 2111100 0 0 0
Q ss_pred hhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHh
Q 009816 292 IEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISD 371 (524)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d 371 (524)
...++.+++++.+...+..++....+.....++|.|+++ +|.+..+++...++.+++.++++++.+++.|
T Consensus 196 -----~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-----~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~ 265 (393)
T PRK09705 196 -----TTPVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIE-----IGASAQYSGSLLALMTLGQAAGALLMPAMAR 265 (393)
T ss_pred -----cCCcccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCChhhhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 001233556777777777777777778888999999987 5999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHH
Q 009816 372 RLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAII 451 (524)
Q Consensus 372 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 451 (524)
|.++|+....+..+..++...+... +. +.... ..++.|++.+..++.......+..++ ++.+++..|+.
T Consensus 266 r~~~~~~~~~~~~l~~~~~~~~~~~-~~-~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~-------~~~~g~~~g~~ 334 (393)
T PRK09705 266 HQDRRKLLMLALVLQLVGFCGFIWL-PL-QLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQ-------PAIAGKLVAFM 334 (393)
T ss_pred hccchHHHHHHHHHHHHHHHHHHHc-cc-hHHHH--HHHHHHHhccchHHHHHHHHHhhcCC-------HHHHHHHHHHH
Confidence 9999988877766655554443322 11 22221 23345666666666655555555532 35679999999
Q ss_pred HhhhhhhhhhhhhhhHhhccc--ChhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009816 452 DGTGSVGAAIGPLLTGYISAT--SWTAVFTMLMAAALISGLLLTRLVVAEVA 501 (524)
Q Consensus 452 ~~~~~~g~~i~~~~~g~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (524)
+...+++..++|.+.|++.|. ++...|++.++++++..+... ...+|++
T Consensus 335 ~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 385 (393)
T PRK09705 335 QGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITL-RFAPARF 385 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHH-Hhccccc
Confidence 999999999999999999998 577888887776666544444 3344443
No 21
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=2.5e-35 Score=290.05 Aligned_cols=368 Identities=18% Similarity=0.154 Sum_probs=285.1
Q ss_pred HHHHHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhhHhHHHHHH
Q 009816 40 LIVTFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTALLGELDLAF 119 (524)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~s~~ 119 (524)
....++.....+..+..+++..|.+.++ +|+++ .+.|++.+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------~~~s~-------~~~g~~~s~~ 47 (377)
T TIGR00890 5 VLVGTVIMCFTSGYVYTWTLLAPPLGRY------------------------------FGVGV-------TAVAIWFTLL 47 (377)
T ss_pred EeHHHHHHHHHhhHHhhhhhHHHHHHHH------------------------------hCCCH-------HHHHHHHHHH
Confidence 3344444445555677888899999988 88887 9999999999
Q ss_pred HHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHHHHhhcccc
Q 009816 120 LSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVAVVGNWFGK 199 (524)
Q Consensus 120 ~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 199 (524)
.+++.++++++|+++||+|||+++..+.++.+++.++++++ ++++.+++.|++.|++.+..++.....+.+++|
T Consensus 48 ~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~- 121 (377)
T TIGR00890 48 LIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIA-----DSLAALYLTYGLASAGVGIAYGIALNTAVKWFP- 121 (377)
T ss_pred HHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHH-----HHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-
Confidence 99999999999999999999999999999999999999997 999999999999999999888888889999996
Q ss_pred ccccceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCccccccCCccccC
Q 009816 200 SKRGLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNEEDESLSPKKIG 278 (524)
Q Consensus 200 ~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (524)
++|+++.++...+.++|..+++++.+.+. ..|||+.|++.+++.++..+..++++++++++..+++ + + .
T Consensus 122 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~---~----- 191 (377)
T TIGR00890 122 DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIGYPPGQLIKTN-I-E---V----- 191 (377)
T ss_pred cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHheecCchhccccC-c-c---c-----
Confidence 68999999999999999887655554444 6799999999998888877777666665433211100 0 0 0
Q ss_pred CCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHH
Q 009816 279 EGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVG 358 (524)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 358 (524)
+++....++.+++|.++...+..++..........+.+.|.++ +|.+..+.+.+.+...++
T Consensus 192 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 252 (377)
T TIGR00890 192 --------------SVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQS-----LGLSDGFLVLAVSISSIF 252 (377)
T ss_pred --------------chhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHH-----cCCCHHHHHHHHHHHHHH
Confidence 0011224567788888877776666655555556667777666 488888899999999999
Q ss_pred HHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCC
Q 009816 359 GVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLK 438 (524)
Q Consensus 359 ~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (524)
.++++++.|++.||++||+.+..+.....++.+.+... +..+........++.+++.+...+.......+.+|+
T Consensus 253 ~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~----- 326 (377)
T TIGR00890 253 NGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFI-PMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGP----- 326 (377)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHc-ccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhh-----
Confidence 99999999999999999998887777666665544332 212222233344556666666666666677777763
Q ss_pred CCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-ChhHHHHHHHHHHHHH
Q 009816 439 GNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-SWTAVFTMLMAAALIS 488 (524)
Q Consensus 439 ~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~ 488 (524)
+.++++.|+.+....+|..++|.+.|.+.+. +|+..|.+.+++.+++
T Consensus 327 ---~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 327 ---ANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred ---hhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 6679999999999999999999999999887 8998888887766654
No 22
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=7.1e-35 Score=291.56 Aligned_cols=375 Identities=14% Similarity=0.133 Sum_probs=274.6
Q ss_pred cchhhHHHHHHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhhHh
Q 009816 34 NHQAIVLIVTFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTALLG 113 (524)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g 113 (524)
+.++..+..++++++.+.+++...+...|.+.++ +|+++ .+.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~------------------------------~~~s~-------~~~~ 56 (426)
T PRK12307 14 RPQKNALFSAWLGYVFDGFDFMLIFYIMYLIKAD------------------------------LGLTD-------MEGA 56 (426)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH------------------------------hCCCH-------HHHH
Confidence 4666777888899999999999999999999888 88887 8999
Q ss_pred HHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHHHH
Q 009816 114 ELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVAVV 193 (524)
Q Consensus 114 ~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i 193 (524)
++.+.+.+++.++++++|+++||+|||++++++.++.+++.++++++ ++++.+++.|+++|++.+...+....++
T Consensus 57 ~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~r~l~G~g~g~~~~~~~~~~ 131 (426)
T PRK12307 57 FLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLA-----SGVIMLTLSRFIVGMGMAGEYACASTYA 131 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHH-----hHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999997 8999999999999999999999999999
Q ss_pred hhccccccccceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCccccccC
Q 009816 194 GNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNEEDESL 272 (524)
Q Consensus 194 ~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (524)
.|++|+++|+++.++...+..+|.++++.+.+.+. .++||+.|++..+ ..+..+......||++++...+.++
T Consensus 132 ~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~-~~~~~~~~~~~~p~~~~~~~~~~~~----- 205 (426)
T PRK12307 132 VESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLL-PVLLVIYIRARAPESKEWEEAKLSG----- 205 (426)
T ss_pred HHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHH-HHHHHHHHHHHCCCChHHHHhhhhc-----
Confidence 99999999999999999999999999998888776 5799999988443 3322222222233332211100000
Q ss_pred CccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHH---HHHHHHHHHHHHHHHHhhcccCCCCCChhhhh
Q 009816 273 SPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFF---AKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAG 349 (524)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 349 (524)
. .+. .+...+.....+++.+++|.++........ .....+....++|.|+++ .|+++.+.+
T Consensus 206 ~-~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~ 269 (426)
T PRK12307 206 K-GKH----------SQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAG-----EGFDTGVVS 269 (426)
T ss_pred c-ccc----------cccchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCCHHHHH
Confidence 0 000 000001112345677888877654433222 222333466789999887 488999999
Q ss_pred hHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHh
Q 009816 350 NLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSA 429 (524)
Q Consensus 350 ~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 429 (524)
...+...++.++++++.|++.||++||+.+..+.++..+..+.+... ............+..++...+..+.....+.+
T Consensus 270 ~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (426)
T PRK12307 270 NLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRI-PQDNYLLLGACLFGLMATNVGVGGLVPKFLYD 348 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH-ccccHHHHHHHHHHHHHhcccHhHHHHHHHHH
Confidence 99999999999999999999999999998877766655544333221 12222222222222222222333445566667
Q ss_pred hhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-ChhHHHHHH
Q 009816 430 DLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-SWTAVFTML 481 (524)
Q Consensus 430 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~~~~~ 481 (524)
.+| ++.+|++.|+.+....+++.++|.+.|++.+. ++....++.
T Consensus 349 ~~p--------~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~~~~~ 393 (426)
T PRK12307 349 YFP--------LEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALTFI 393 (426)
T ss_pred hCc--------HHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHHHHHH
Confidence 776 36789999999999999999999999999987 655443333
No 23
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=7e-35 Score=282.53 Aligned_cols=354 Identities=19% Similarity=0.122 Sum_probs=264.6
Q ss_pred HHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhhHhHHHHHHHHHHHhhhhh
Q 009816 50 YHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTALLGELDLAFLSIYAGGMFF 129 (524)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~ 129 (524)
+......+++..|.+.+| +|+++ .+.|++.+.+.+++.+++++
T Consensus 3 ~~~~~~~~~~~lp~i~~~------------------------------~~~s~-------~~~g~~~s~~~~g~~i~~~~ 45 (368)
T TIGR00903 3 SQAIWVTFSPVLSLVAED------------------------------IDVSK-------EELGLLAITYPAAFLALTIP 45 (368)
T ss_pred hhHHHHHHHhhHHHHHHH------------------------------hCcCH-------HHHHHHHHHHHHHHHHHHHH
Confidence 344556677888888888 88887 99999999999999999999
Q ss_pred hhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHHHHhhccccccccceehhh
Q 009816 130 SGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIW 209 (524)
Q Consensus 130 ~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~ 209 (524)
.|+++||+|||+++..+......+.+....+ ++++.+++.|+++|++.+. .+.....++|++|+++|++++++.
T Consensus 46 ~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~ 119 (368)
T TIGR00903 46 SGLLLDRAFKRWFLFGSLATFAAAAGRLLDP-----FNYEWLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLL 119 (368)
T ss_pred HHHHHHHccchHHHHHHHHHHHHHHHHHHHh-----ccHHHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHH
Confidence 9999999999998776655554443333332 6899999999999999986 556667779999999999999999
Q ss_pred hhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCccccccCCccccCCCcccccccc
Q 009816 210 NAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNEEDESLSPKKIGEGVTQPLLRR 288 (524)
Q Consensus 210 ~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (524)
..+..+|.+++++++..+. ++|||+.|++.++++++..++.++.+||+|+++.+.. . .
T Consensus 120 ~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p~~~~~~~-------~--------------~ 178 (368)
T TIGR00903 120 SFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPALPFQAAEGF-------G--------------F 178 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCc-------c--------------h
Confidence 9999999999999999988 6799999999999988888888888998775431100 0 0
Q ss_pred hhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHH
Q 009816 289 ETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGH 368 (524)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~ 368 (524)
++...++++++++|.+|...+..++....++++.+|+|.|+++. |++.. .+....+..+.+.++ .++
T Consensus 179 ----~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~-----g~s~~-~~~~~~l~~~~g~~g---~~~ 245 (368)
T TIGR00903 179 ----KDAVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRPA-----GLEDI-AGDAVALAILAGLIG---VAV 245 (368)
T ss_pred ----HHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----CCChH-HHHHHHHHHHHHHHH---HHH
Confidence 00112356889999999999999999999999999999999774 77764 555555555555554 467
Q ss_pred HHhhhhhh---HHHHH-HHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccch
Q 009816 369 ISDRLDAR---AITAA-SFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRAL 444 (524)
Q Consensus 369 l~dr~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (524)
++||..|| +.... ...+.++....+.. ..+....+....+.+++....++....+.++.+|+ +.|
T Consensus 246 ~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~--------~~r 314 (368)
T TIGR00903 246 IPDRVARAGLRSIYIRAAALLIAAFFLALAF---ELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDK--------ELH 314 (368)
T ss_pred hhHHhhhhhhHHHHHHHHHHHHHHHHHHHHH---ccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcch--------hhc
Confidence 77776543 33222 22222222222211 12223334455556666667777777788888874 678
Q ss_pred hHHHHHHHhhhhhhhhhhhhhhHhhcccChhHHHHHHHHHHHHHHHHH
Q 009816 445 ATVTAIIDGTGSVGAAIGPLLTGYISATSWTAVFTMLMAAALISGLLL 492 (524)
Q Consensus 445 g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~ 492 (524)
|++.|+.+..+++++.++|.+.+.+.. +....|.+.++..+++.+..
T Consensus 315 gt~~G~~~~~g~~~~~~~~~~~~~~~~-~~~~~f~~~~~~~~i~~~~~ 361 (368)
T TIGR00903 315 GKAAGAIGFTSRAISVALALAAMLFIS-SAEAYFTFLAILITIAFAIA 361 (368)
T ss_pred CcccchhhHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999987774 67777888877777665554
No 24
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=100.00 E-value=3.4e-34 Score=286.64 Aligned_cols=406 Identities=23% Similarity=0.401 Sum_probs=287.8
Q ss_pred cccchhhHHHHHHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhh
Q 009816 32 FKNHQAIVLIVTFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTAL 111 (524)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 111 (524)
.++.+|..+....+.+...+.++..+....|.+. + +|+++ ++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~------------------------------~g~s~-------~~ 62 (438)
T TIGR00712 21 YKRLRWQVFLGIFFGYAAYYLVRKNFALAMPYLV-E------------------------------QGFSK-------GE 62 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccHHhhhHHHH-H------------------------------cCCCH-------hH
Confidence 3445677778888888999999988888877664 3 45565 89
Q ss_pred HhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHH
Q 009816 112 LGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVA 191 (524)
Q Consensus 112 ~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~ 191 (524)
.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.++.+.... ..++++.+.+.|++.|++.+..++....
T Consensus 63 ~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~l~g~~~g~~~~~~~~ 141 (438)
T TIGR00712 63 LGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPW-ATSSIAIMFVLLFLNGWFQGMGWPPCGR 141 (438)
T ss_pred hHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhcccc-ccchHHHHHHHHHHHHHHhhcchHHHHH
Confidence 999999999999999999999999999999999999999998888765310 0146778889999999999999999999
Q ss_pred HHhhccccccccceehhhhhhhhhHHHHHHHHHHHhh--hcCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCcccc
Q 009816 192 VVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL--TYGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNEED 269 (524)
Q Consensus 192 ~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~--~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (524)
.+.|++|+++|++++++.+.+.++|..+++.+.+... ..+||+.|++.+++.++..++.++++||+|++...++.++.
T Consensus 142 ~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 221 (438)
T TIGR00712 142 TMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEEY 221 (438)
T ss_pred HHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchhc
Confidence 9999999999999999999999999999987766543 46899999999988888777777888887654321110000
Q ss_pred ccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhh
Q 009816 270 ESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAG 349 (524)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 349 (524)
+.+..++..+ + .+.+.+.+.......++++.+|...+..++.....++...++|.|+++. .|+++.+++
T Consensus 222 ~~~~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~----~g~s~~~~~ 290 (438)
T TIGR00712 222 RNDYPDDYNE---K----AEQELTAKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEV----KHFALDKSS 290 (438)
T ss_pred cccccccccc---c----cccccchHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHc----cCCChhhHH
Confidence 0000000000 0 0000000111123467889898888877777777788889999999987 799999999
Q ss_pred hHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHH--HHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHH
Q 009816 350 NLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAI--PALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAV 427 (524)
Q Consensus 350 ~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 427 (524)
+...+..+++++++++.|++.||+++++....+...... ............+.+......++.|++..+.........
T Consensus 291 ~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 370 (438)
T TIGR00712 291 WAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGPVMLIGLHA 370 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 999999999999999999999999644322222222111 111111111122233333334444543322222222344
Q ss_pred HhhhcccccCCCCccchhHHHHHHHhhhhhhh-hhhhhhhHhhccc-ChhHHHHHHHHHHHHHHHHHHHH
Q 009816 428 SADLGTHSSLKGNSRALATVTAIIDGTGSVGA-AIGPLLTGYISAT-SWTAVFTMLMAAALISGLLLTRL 495 (524)
Q Consensus 428 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~-~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~ 495 (524)
.+..| ++.+|++.|+.+....+++ +++|.+.|.+.|. +|+..+++..++.+++.+..+..
T Consensus 371 ~~~~~--------~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 432 (438)
T TIGR00712 371 LELAP--------KKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVV 432 (438)
T ss_pred HHhcC--------hhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHH
Confidence 45555 3677999999998888875 6899999999998 89999988887777666655533
No 25
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-34 Score=266.93 Aligned_cols=387 Identities=21% Similarity=0.213 Sum_probs=323.8
Q ss_pred cccchhhHHHHHHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhh
Q 009816 32 FKNHQAIVLIVTFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTAL 111 (524)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 111 (524)
.++.+++.+.+..+++.+.++.+..++++.+.+.+| +|+|+ .|
T Consensus 8 ~k~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~------------------------------~~LS~-------~q 50 (417)
T COG2223 8 GKRIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSD------------------------------FGLSE-------GQ 50 (417)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhccc------------------------------cCCCH-------HH
Confidence 346677788888999999999999999999999977 89998 99
Q ss_pred HhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHH
Q 009816 112 LGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVA 191 (524)
Q Consensus 112 ~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~ 191 (524)
.+++.+...+...+..++.|.+.||||.|++..++.++..+..+..+++. ..++++++++.+.+.|++ |........
T Consensus 51 ~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~--~~~~~~~ll~~gll~G~~-GasFav~m~ 127 (417)
T COG2223 51 KGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAV--TYPSTWQLLVIGLLLGLA-GASFAVGMP 127 (417)
T ss_pred HHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHc--cCCchHHHHHHHHHHhcc-cceehcccc
Confidence 99999999999999999999999999999999999999999999999872 234557999999999999 556788899
Q ss_pred HHhhccccccccceehhhhhhhhhHHHHHHHHHHHhh-hcC---chhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCcc
Q 009816 192 VVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL-TYG---WGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNE 267 (524)
Q Consensus 192 ~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~g---wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (524)
.++.|||+|++|.++|+.. ..++|..+...++..+. ..+ ||....+..+..++..+..++.+.|.|+.+...++.
T Consensus 128 ~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~ 206 (417)
T COG2223 128 NASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQ 206 (417)
T ss_pred cccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhcccccc
Confidence 9999999999999999999 88999999988888877 567 999999988888888889999998887753222111
Q ss_pred ccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhh
Q 009816 268 EDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEM 347 (524)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 347 (524)
. +..++.+.++++.|.+.+.++.....+.++..++|.|+++. ++.++.+
T Consensus 207 ~---------------------------~~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~----fg~~~~~ 255 (417)
T COG2223 207 L---------------------------PAQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQ----FGLSPVT 255 (417)
T ss_pred c---------------------------hhHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh----cCCChhh
Confidence 0 02346778899999999999999999999999999999999 9999999
Q ss_pred hhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcc----hhHHHHHHHHHHHHhhhhhhhHHH
Q 009816 348 AGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGH----LSLALNIALMFITGMFVNGPYALI 423 (524)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~ 423 (524)
++.+.....+.+.+.++++|+++||+|.+|.+...+..++++..+.....+. .+........+..+++.+......
T Consensus 256 Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsv 335 (417)
T COG2223 256 AGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSV 335 (417)
T ss_pred HHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchh
Confidence 9999999999999999999999999999999888888888777666543211 334444454555555666666566
Q ss_pred HHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc--ChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 009816 424 TTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT--SWTAVFTMLMAAALISGLLLTRLVVAE 499 (524)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (524)
+-.++..++ +..|.+.|+...++.+|+..-|...|...+. .+...|++...+.+++.++....+.++
T Consensus 336 fk~Ip~if~---------~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y~r~ 404 (417)
T COG2223 336 FKMIPVIFP---------KETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALYARR 404 (417)
T ss_pred eeechHHHH---------hhhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 666666554 4568999999999999999999999999988 589999999988888877766555443
No 26
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=7e-34 Score=279.44 Aligned_cols=366 Identities=13% Similarity=0.121 Sum_probs=273.5
Q ss_pred HHHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhhHhHHHHHHHH
Q 009816 42 VTFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTALLGELDLAFLS 121 (524)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~s~~~l 121 (524)
...+..+.....+.......|.+.+| +|++. ++.|++.+.+.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~l~~~~~~------------------------------~g~s~-------~~~g~~~s~~~~ 49 (382)
T PRK10091 7 SLALGTFGLGMAEFGIMGVLTELAHD------------------------------VGISI-------PAAGHMISYYAL 49 (382)
T ss_pred HHHHHHHHHHhhHHHHHhChHHHHHH------------------------------cCCCH-------HHHhHHHHHHHH
Confidence 34445555566666777788888888 88887 899999999999
Q ss_pred HHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHHHHhhcccccc
Q 009816 122 IYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVAVVGNWFGKSK 201 (524)
Q Consensus 122 ~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~ 201 (524)
++.++++++|+++||+|||+++..+.++.+++.++++++ ++++.+++.|+++|++.+...+....++.+++|+++
T Consensus 50 ~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~-----~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~ 124 (382)
T PRK10091 50 GVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLS-----SSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGK 124 (382)
T ss_pred HHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHh-----CcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHH
Confidence 999999999999999999999999999999999999997 999999999999999999888888899999999999
Q ss_pred ccceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCccccccCCccccCCC
Q 009816 202 RGLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNEEDESLSPKKIGEG 280 (524)
Q Consensus 202 r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (524)
|++++++...+..+|..++|++++.+. .+|||+.|++.+++.++..+..++.+||.+++.+. +
T Consensus 125 ~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~~~~~---~------------- 188 (382)
T PRK10091 125 VTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPDIRDEAKG---G------------- 188 (382)
T ss_pred hhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCCCCccccc---C-------------
Confidence 999999999999999999999998887 57999999999888777666666667764321100 0
Q ss_pred cccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHH
Q 009816 281 VTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGV 360 (524)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 360 (524)
.....+.++++..+......++.....+....+++.++.+. +|+++.+.+++....+++.+
T Consensus 189 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~g~s~~~~~~~~~~~~~~~~ 249 (382)
T PRK10091 189 ---------------LREQFHFLRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFI----SGFSETSMTFIMMLVGLGMV 249 (382)
T ss_pred ---------------HHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----cCCCHHHHHHHHHHHHHHHH
Confidence 00012346677666655554444444445556677777766 79999999999999999999
Q ss_pred hhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCC
Q 009816 361 LGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGN 440 (524)
Q Consensus 361 ~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (524)
+++++.+++.||+++|+.+..+..+..++.+.+... .++.+...+..++.+++.....++......+..++
T Consensus 250 ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~------- 320 (382)
T PRK10091 250 LGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFF--GGMKTASLIFAFICCAGLFALSAPLQILLLQNAKG------- 320 (382)
T ss_pred HHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHH--HhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCc-------
Confidence 999999999999999998887776666555444322 12223333444444444444333333333333221
Q ss_pred ccchhHHHHHHHhhhhhhhhhhhhhhHhhccc--ChhHHHHHHHHHHHHHHHHHHHH
Q 009816 441 SRALATVTAIIDGTGSVGAAIGPLLTGYISAT--SWTAVFTMLMAAALISGLLLTRL 495 (524)
Q Consensus 441 ~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~--~~~~~~~~~~~~~~~~~~~~~~~ 495 (524)
++..+.+ ..+....+|..+||.+.|++.|. +|+..+...+++..+........
T Consensus 321 ~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (382)
T PRK10091 321 GELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLY 375 (382)
T ss_pred chHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHH
Confidence 2334443 34667789999999999999985 78888888876666555444433
No 27
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=1e-34 Score=288.67 Aligned_cols=388 Identities=16% Similarity=0.203 Sum_probs=283.1
Q ss_pred cccchhhHHHHHHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhh
Q 009816 32 FKNHQAIVLIVTFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTAL 111 (524)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 111 (524)
.++++|+.+..++++++.+++++...+.+.|.+.++ +|+++ .+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~------------------------------~~~s~-------~~ 48 (405)
T TIGR00891 6 LTRAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGE------------------------------FGLTT-------VD 48 (405)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------------hCCCh-------hh
Confidence 457888999999999999999999999999999888 88887 99
Q ss_pred HhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHH
Q 009816 112 LGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVA 191 (524)
Q Consensus 112 ~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~ 191 (524)
.|++.+.+.++..+++++.|+++||+|||++++++.++.+++.++++++ ++++.+++.|++.|++.+...+...+
T Consensus 49 ~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~~l~G~~~~~~~~~~~~ 123 (405)
T TIGR00891 49 AASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFA-----PGYITMFIARLVIGIGMGGEYGSSAA 123 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHh-----ccHHHHHHHHHHHHhhhhhhhHHHHH
Confidence 9999999999999999999999999999999999999999999999986 89999999999999999999999999
Q ss_pred HHhhccccccccceehhhhhhhhhHHHHHHHHHHHhh-hcC--chhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCccc
Q 009816 192 VVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL-TYG--WGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNEE 268 (524)
Q Consensus 192 ~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~g--wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (524)
++.|++|+++|++++++...+..+|.++++.+++.+. ..+ ||+.|++.++..++ .++....+||++++...++.++
T Consensus 124 ~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 202 (405)
T TIGR00891 124 YVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIF-ALWLRKNIPEAEDWKEKHAGKA 202 (405)
T ss_pred HHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHH-HHHHHHhCCCChhHHHHhhhhh
Confidence 9999999999999999999999999999999998887 345 99999886554443 3445556676543221111000
Q ss_pred cccCCccccCCCcccccccchhhhhhhhhhHHHHhcC-CC-cHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChh
Q 009816 269 DESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKI-PG-VAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSE 346 (524)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 346 (524)
......++..+. ++..+ ...++.....++..++ +. +........+..........++|.|+.+. +|++..
T Consensus 203 ~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~g~s~~ 274 (405)
T TIGR00891 203 LVRTMVDILYGG--EHRIA--NIVMTLAAAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKAD----LGLSPH 274 (405)
T ss_pred hhhhHHHHHhcc--chhhh--hhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHH----hCCCHH
Confidence 000000000000 00000 0000000011111111 11 11222223333444455667889998876 799999
Q ss_pred hhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHH
Q 009816 347 MAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTA 426 (524)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 426 (524)
+.+.+.+...++.++++++.+++.||+++|+.+..+.....+........ ..+.+...+..++.+++.....+.....
T Consensus 275 ~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (405)
T TIGR00891 275 TVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAI--GANVAVLGLGLFFQQMLVQGIWGILPKH 352 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHh--CCchHHHHHHHHHHHHHHccchhhHHHH
Confidence 99999999999999999999999999999998877766543333222221 2333444444455566666666666777
Q ss_pred HHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-C-hhHHHHH
Q 009816 427 VSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-S-WTAVFTM 480 (524)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~-~~~~~~~ 480 (524)
+.+..| ++.++++.|+.+.+..+|..++|++.|++.|. | |+..+..
T Consensus 353 ~~~~~~--------~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 353 LGEYFP--------TDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HhhhCC--------cchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHh
Confidence 777776 36679999999999999999999999999998 5 7655544
No 28
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=100.00 E-value=1.8e-34 Score=284.13 Aligned_cols=372 Identities=28% Similarity=0.486 Sum_probs=282.2
Q ss_pred HHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhhHhHHHHHHHHHHH
Q 009816 45 FAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTALLGELDLAFLSIYA 124 (524)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~s~~~l~~~ 124 (524)
++++..+.++..++...|.+.++ +|+++ .+.|++.+++.++..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~------------------------------~g~s~-------~~~g~~~~~~~~~~~ 44 (379)
T TIGR00881 2 IGYAAYYLVRKNFALAMPYLVEE------------------------------IGLSK-------TDLGLLLSSFSIAYG 44 (379)
T ss_pred chhhHHHHhHHhhhhhhHHHHHH------------------------------hCCCH-------hHHHHHHHHHHHHHH
Confidence 45778889999999999999888 88887 999999999999999
Q ss_pred hhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHHHHhhccccccccc
Q 009816 125 GGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVAVVGNWFGKSKRGL 204 (524)
Q Consensus 125 ~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~ 204 (524)
++++++|+++||+|||++++++.++.+++.++++++ ++++.+++.|++.|++.+...+...+++.|++|+++|++
T Consensus 45 ~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~ 119 (379)
T TIGR00881 45 ISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFS-----TSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGT 119 (379)
T ss_pred hhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHh-----hhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhhee
Confidence 999999999999999999999999999999999997 899999999999999999999999999999999999999
Q ss_pred eehhhhhhhhhHHHHHH-HHHHHhh-hcCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCccccccCCccccCCCcc
Q 009816 205 IMGIWNAHTSIGNITGS-LVASALL-TYGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNEEDESLSPKKIGEGVT 282 (524)
Q Consensus 205 ~~~~~~~~~~~G~~ig~-~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (524)
++++...+..+|..++| .+++.+. ..+||+.|++.+++.++..++.+++.||+++.....+.++....+. +.+
T Consensus 120 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--- 194 (379)
T TIGR00881 120 WVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLLRDSPQSCGLPPAEEMPNEEP--DGD--- 194 (379)
T ss_pred eEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHheeeCCCccccccCccccCccccc--ccc---
Confidence 99999999999999999 4666655 5799999999888887777777777777655432211111100000 000
Q ss_pred cccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhh
Q 009816 283 QPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLG 362 (524)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 362 (524)
..+.+++.++.....+..+++|.++...+..++..........+.|.|+++. +|+++.+.+.......++.+++
T Consensus 195 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~ 268 (379)
T TIGR00881 195 --AEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLYLTQE----KGFSKEKASWAFTLYELGGLVG 268 (379)
T ss_pred --cccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----hCCCHHHHHHHHHHHHHHcchh
Confidence 0000011111223456678899998888888888888888889999999887 7999999999999999999999
Q ss_pred hHHHHHHHhhhhhh-HHHH-HHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCC
Q 009816 363 GILAGHISDRLDAR-AITA-ASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGN 440 (524)
Q Consensus 363 ~~~~g~l~dr~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (524)
+++.+++.||..++ +... ..........+......+..+........++.|+...+..........+..|
T Consensus 269 ~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-------- 340 (379)
T TIGR00881 269 TLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAP-------- 340 (379)
T ss_pred HHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcC--------
Confidence 99999999986433 3222 2111111111122111112333444455556666555555555566666666
Q ss_pred ccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-ChhHH
Q 009816 441 SRALATVTAIIDGTGSVGAAIGPLLTGYISAT-SWTAV 477 (524)
Q Consensus 441 ~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~ 477 (524)
++.++++.|+.+....+|..++|.+.|.+.|. ||+..
T Consensus 341 ~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~ 378 (379)
T TIGR00881 341 KKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGA 378 (379)
T ss_pred cchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhccccc
Confidence 36789999999999999999999999999987 76654
No 29
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=100.00 E-value=2.1e-33 Score=278.72 Aligned_cols=360 Identities=14% Similarity=0.052 Sum_probs=282.6
Q ss_pred ccchhhHHHHHHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhhH
Q 009816 33 KNHQAIVLIVTFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTALL 112 (524)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 112 (524)
+++.+...+.+.+..+++++....+.+..|.+.++ +|+++ .+.
T Consensus 8 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~------------------------------~~~s~-------~~~ 50 (406)
T PRK15402 8 GRQALLFPLCLVLFEFATYIANDMIQPGMLAVVED------------------------------FNAGA-------EWV 50 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHH------------------------------hCCCH-------HHH
Confidence 45566667777777788888888787888888777 88777 899
Q ss_pred hHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHHH
Q 009816 113 GELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVAV 192 (524)
Q Consensus 113 g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~ 192 (524)
++..+.+.+++.+++++.|+++||+|||++++++.++.+++.+++.++ ++++.+++.|+++|++.+...+...++
T Consensus 51 ~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~~~l~G~~~~~~~~~~~~~ 125 (406)
T PRK15402 51 PTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLA-----QSIEQFTLLRFLQGIGLCFIGAVGYAA 125 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHH-----ccHHHHHHHHHHHHhHhhhHHHHHHHH
Confidence 999999999999999999999999999999999999999999998886 899999999999999999888999999
Q ss_pred HhhccccccccceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCcccccc
Q 009816 193 VGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNEEDES 271 (524)
Q Consensus 193 i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (524)
+.|++|+++|.+++++......+|..++|.+++.+. ..+||+.|++.+++.++..+..++..||++++..++.
T Consensus 126 i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 199 (406)
T PRK15402 126 IQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETAGRVGEKL------ 199 (406)
T ss_pred HHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCCccccccc------
Confidence 999999999999999998888899999999998887 4699999999888887776656666665532211000
Q ss_pred CCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhH
Q 009816 272 LSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNL 351 (524)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 351 (524)
+.++...+++..+++|.++...+..++..........+.|.++.+. +|+++.+.+..
T Consensus 200 -------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~----~g~~~~~~g~~ 256 (406)
T PRK15402 200 -------------------SLKELGRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISG----EQLSSYEYGLL 256 (406)
T ss_pred -------------------cHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH----hCCCHHHHHHH
Confidence 0001223456788999988877776666666666667788888776 79999999988
Q ss_pred HHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhh--cchhHHHHHHHHHHHHhhhhhhhHHHHHHHHh
Q 009816 352 STLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSY--GHLSLALNIALMFITGMFVNGPYALITTAVSA 429 (524)
Q Consensus 352 ~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 429 (524)
.....++.+++.++.+++.||+++|+.+..+.....++...+.... ...+.++.....++.|++.+...+........
T Consensus 257 ~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~ 336 (406)
T PRK15402 257 QVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLANAGLYRLTLF 336 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHhhhHHHHHhh
Confidence 8878888999999999999999999988877766655554443321 12234445556666777766655544443322
Q ss_pred hhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc
Q 009816 430 DLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT 472 (524)
Q Consensus 430 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 472 (524)
.+ ++.+|++.++.+..+.++..+|+.+.+++.+.
T Consensus 337 -~~--------~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~ 370 (406)
T PRK15402 337 -SS--------DVSKGTVSAAMGMLSMLIFTVGIELSKHAYLG 370 (406)
T ss_pred -hc--------cccccHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 22 25679999999999999999999999999887
No 30
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=2e-33 Score=280.60 Aligned_cols=383 Identities=15% Similarity=0.175 Sum_probs=267.7
Q ss_pred chhhHHHHHHHHHHHHHhhcccccccccc-cCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhhHh
Q 009816 35 HQAIVLIVTFFAYTSYHAARKTTSIVKST-LDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTALLG 113 (524)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g 113 (524)
++++.+...+++++.+++|...++.+.|. +.++.. -+.++ . .+
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~----------------------------~~~~~-------~-~~ 62 (438)
T PRK09952 19 RARRAALGSFAGAVVDWYDFLLYGITAALVFNREFF----------------------------PQVSP-------A-MG 62 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----------------------------CCCCc-------H-HH
Confidence 44567778888999999999999987764 333310 03333 2 34
Q ss_pred HHH-----HHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHH--------HHHHHHHHHHH
Q 009816 114 ELD-----LAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFY--------YYLVVQMLAGL 180 (524)
Q Consensus 114 ~~~-----s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~--------~~~~~r~l~G~ 180 (524)
++. ++.+++..+++++.|+++||+|||++++++.+++++++++++++ +++. .+++.|+++|+
T Consensus 63 ~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~R~l~G~ 137 (438)
T PRK09952 63 TLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLL-----PSFSTIGWWAPVLLVTLRAIQGF 137 (438)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcC-----CcHHHHHHHHHHHHHHHHHHHHh
Confidence 432 45567778999999999999999999999999999999999997 7776 58899999999
Q ss_pred hhhcchhhHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhh---------hcCchhHHHHhHHHHHHHHHHHH
Q 009816 181 FQSTGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL---------TYGWGWSFVVPGLIIAFVGLIVF 251 (524)
Q Consensus 181 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~---------~~gwr~~f~~~~~~~~~~~~~~~ 251 (524)
+.|..++....++.|++|+++|++..+....+..+|.++++.+...+. ++|||++|++.+++.++ .+...
T Consensus 138 ~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~-~~~l~ 216 (438)
T PRK09952 138 AVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLI-ALWVR 216 (438)
T ss_pred hhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHH-HHHHH
Confidence 999999999999999999999999999999999999999877766553 36999999987765543 34444
Q ss_pred HhcCCCCCCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHH-HHHHHHHHHHHHHHHHH
Q 009816 252 LFLPVNPESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFAL-CLFFAKLVAYTFLYWLP 330 (524)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 330 (524)
...||+|++...+.+.+ + ..+ +.......+++|+.+.... ..++..+..+....+.|
T Consensus 217 ~~~~es~~~~~~~~~~~----~---~~~---------------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (438)
T PRK09952 217 NGMEESAEFEQQQHEQA----A---AKK---------------RIPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFAL 274 (438)
T ss_pred HhCCCChhHHHHHhhcc----c---ccc---------------cCCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566654321110000 0 000 0001123455666555543 34444556677788999
Q ss_pred HHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhh-cchhHHHHHHHH
Q 009816 331 FYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSY-GHLSLALNIALM 409 (524)
Q Consensus 331 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 409 (524)
.|+++. +|++......+....++..+++.++.|+++||++||+.+..+.++..+....+.... .....+..+...
T Consensus 275 ~y~~~~----~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (438)
T PRK09952 275 NYSTQN----LGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSI 350 (438)
T ss_pred HHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHH
Confidence 999876 788887665555666777788899999999999999988776655444332222211 112233333344
Q ss_pred HHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhh-hhhhhhhhhhhHhhccc---ChhHHHHHHHHHH
Q 009816 410 FITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTG-SVGAAIGPLLTGYISAT---SWTAVFTMLMAAA 485 (524)
Q Consensus 410 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~-~~g~~i~~~~~g~l~~~---~~~~~~~~~~~~~ 485 (524)
++.+++.+...+.......+.+|+ +.|+++.|+.+... .+++.++|.+.+++.+. +|...+.+.+++.
T Consensus 351 ~l~~~~~~~~~~~~~~~~~e~~p~--------~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~ 422 (438)
T PRK09952 351 MLANIAHDMVVCVQQPMFTEMFGA--------SYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGC 422 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCc--------chhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHH
Confidence 555666666666777788888874 56788888865554 58999999999999874 4777777776666
Q ss_pred HHHHHHHH
Q 009816 486 LISGLLLT 493 (524)
Q Consensus 486 ~~~~~~~~ 493 (524)
+++.+..+
T Consensus 423 ~i~~v~~~ 430 (438)
T PRK09952 423 LISAMTAL 430 (438)
T ss_pred HHHHHHHH
Confidence 66655543
No 31
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=2.2e-34 Score=292.83 Aligned_cols=429 Identities=16% Similarity=0.149 Sum_probs=280.6
Q ss_pred ccccchhhHHHHHHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchh
Q 009816 31 SFKNHQAIVLIVTFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTA 110 (524)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 110 (524)
+..++++.++.++.++.+.+.+|...++.+.|.+..+. ++ .+ ...+..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~-----------------------------~~-~~--~~~~~~ 56 (502)
T TIGR00887 9 PFGWQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVY-----------------------------YH-GK--GPLPSS 56 (502)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------------------------cc-Cc--ccchHH
Confidence 45677888888899999999999999999888765431 11 00 112236
Q ss_pred hHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccc-cchhHHHHHHHHHHHHHhhhcchhhH
Q 009816 111 LLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWG-NVHSFYYYLVVQMLAGLFQSTGWPSV 189 (524)
Q Consensus 111 ~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~-~~~~~~~~~~~r~l~G~~~~~~~~~~ 189 (524)
+.+++.+.+.+++.++++++|+++||+|||+++.++.++..++.++++++... ...+++.+++.|+++|++.+...+..
T Consensus 57 ~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 136 (502)
T TIGR00887 57 VSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLS 136 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHH
Confidence 78999999999999999999999999999999999999999999988886100 00127899999999999999999999
Q ss_pred HHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhh------------------------hcCchhHHHHhHHHHHH
Q 009816 190 VAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL------------------------TYGWGWSFVVPGLIIAF 245 (524)
Q Consensus 190 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~------------------------~~gwr~~f~~~~~~~~~ 245 (524)
..++.|++|+++|++++++.+....+|.++++.++..+. +++||++|.+.++.+++
T Consensus 137 ~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i 216 (502)
T TIGR00887 137 AIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALL 216 (502)
T ss_pred HHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998876543 24799999887665554
Q ss_pred HHHHHHHhcCCCCCCCCCCCcccc-ccCC----ccccCCCcccccccchhhhhhhhhhHHHHhcC---CCcHHH----HH
Q 009816 246 VGLIVFLFLPVNPESVGTDTNEED-ESLS----PKKIGEGVTQPLLRRETKIEEKAVGFIEAWKI---PGVAPF----AL 313 (524)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~----~~ 313 (524)
..+..+++||+|++...++++++ ..+. .+.+.++..++..+.+++.+....++++++++ ++.+.. ..
T Consensus 217 -~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 295 (502)
T TIGR00887 217 -ALYFRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAG 295 (502)
T ss_pred -HHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhccccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHH
Confidence 45567789999997433222211 1100 00000000000000000001111245555542 222111 12
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhh------------HHHHHHHHHHhhhHHHHHHHhhhhhhHHHHH
Q 009816 314 CLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGN------------LSTLFDVGGVLGGILAGHISDRLDARAITAA 381 (524)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------------~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~ 381 (524)
..+.....+++...+.|.++++. |++....+. ...+..++.+++.++.+++.||+|||+.+..
T Consensus 296 ~~~~~~~~~y~~~~~~p~i~~~~-----G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~ 370 (502)
T TIGR00887 296 SWFLLDIAFYGVNLNQKVILSAI-----GYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLM 370 (502)
T ss_pred HHHHHHHHHHccccccHHHHHHH-----cCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHH
Confidence 22333344556667788888764 666443221 2233445667788999999999999999887
Q ss_pred HHHHHHHHHHHHHHhhcchhHHHHHHHHHHH-HhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhh
Q 009816 382 SFMYCAIPALFFYRSYGHLSLALNIALMFIT-GMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAA 460 (524)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ 460 (524)
+..+..++..++.......+.........+. .+...+..+....+..|.+| .+.|+++.|+.+.++.++++
T Consensus 371 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p--------~~~R~~~~g~~~~~~~~~~~ 442 (502)
T TIGR00887 371 GFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFP--------TRYRSTAHGISAASGKAGAI 442 (502)
T ss_pred HHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCc--------hhHHHHHHHHHHHHhhhHHH
Confidence 7766666554443321110111111111111 12122233444555667776 47789999999999999999
Q ss_pred hhhhhhHhhccc-----------ChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcc
Q 009816 461 IGPLLTGYISAT-----------SWTAVFTMLMAAALISGLLLTRLVVAEVAAKFVES 507 (524)
Q Consensus 461 i~~~~~g~l~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (524)
++|.+.+++.+. ++...|++.+++.+++.+.. +..+|+++++.+|
T Consensus 443 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~--~~lpEt~~~~lee 498 (502)
T TIGR00887 443 IGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFT--LLIPETKGKSLEE 498 (502)
T ss_pred HHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHh--eEeccCCCCCHHh
Confidence 999999998874 23456777776666654433 3346776655433
No 32
>PRK10504 putative transporter; Provisional
Probab=100.00 E-value=1.9e-33 Score=284.65 Aligned_cols=376 Identities=14% Similarity=0.151 Sum_probs=286.2
Q ss_pred HHHHHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhhHhHHHHHH
Q 009816 40 LIVTFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTALLGELDLAF 119 (524)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~s~~ 119 (524)
+.+++++++...++...++...|.+.++ +|+++ .+.+++.+.+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~------------------------------~g~s~-------~~~~~~~~~~ 54 (471)
T PRK10504 12 LWIVAFGFFMQSLDTTIVNTALPSMAQS------------------------------LGESP-------LHMHMVIVSY 54 (471)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHH------------------------------hCcCH-------HHHHHHHHHH
Confidence 4455667777888888888888888888 88877 8999999999
Q ss_pred HHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHHHHhhcccc
Q 009816 120 LSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVAVVGNWFGK 199 (524)
Q Consensus 120 ~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 199 (524)
.++..++.+++|+++||+|||++++.+.++.+++.+++.++ ++++.+++.|+++|++.+...+...+++.|++|+
T Consensus 55 ~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~ 129 (471)
T PRK10504 55 VLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALS-----GTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPR 129 (471)
T ss_pred HHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCH
Confidence 99999999999999999999999999999999999888886 8999999999999999999999999999999999
Q ss_pred ccccceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCccccccC------
Q 009816 200 SKRGLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNEEDESL------ 272 (524)
Q Consensus 200 ~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 272 (524)
++|+++.++.....++|..+||.+++.+. +.|||+.|++..++..+..+......|+.+.... +.+.....
T Consensus 130 ~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~--r~~~~~~~~~~~~~ 207 (471)
T PRK10504 130 EQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPNYTMQTR--RFDLSGFLLLAVGM 207 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCccccCC--CCChHHHHHHHHHH
Confidence 99999999999999999999999999888 5799999999887777666666665555432211 11100000
Q ss_pred ------CccccCCCcccc---------------cccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHH
Q 009816 273 ------SPKKIGEGVTQP---------------LLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPF 331 (524)
Q Consensus 273 ------~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (524)
..+.+....... ...+++... ++....++++||.++...+..++..........+.|.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 286 (471)
T PRK10504 208 ATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNNN-RALFSLKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPV 286 (471)
T ss_pred HHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcCC-CCccCHHHhcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000000000 000000011 1111235789999988888888777777777788999
Q ss_pred HHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHH
Q 009816 332 YVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFI 411 (524)
Q Consensus 332 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (524)
|++.. +|.++.+.++......++.+++.++.+++.||+++|+.+..+..+..+...++.......+.+......++
T Consensus 287 ~~~~~----~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (471)
T PRK10504 287 FLQIG----LGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFL 362 (471)
T ss_pred HHHHH----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHH
Confidence 99876 79999999999998889888888999999999999999888777666665554432222333333344556
Q ss_pred HHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc
Q 009816 412 TGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT 472 (524)
Q Consensus 412 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 472 (524)
.|++.+..++.......+.+|+ +.++.+.|+.++...+|..+|+.+.|.+.+.
T Consensus 363 ~g~~~~~~~~~~~~~~~~~~~~--------~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~ 415 (471)
T PRK10504 363 QGMVNSTRFSSMNTLTLKDLPD--------NLASSGNSLLSMIMQLSMSIGVTIAGLLLGL 415 (471)
T ss_pred HHHHHHHHHHHHHHHHHHcCCH--------HhccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6777777777777777777763 6679999999999999999999999988776
No 33
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.4e-34 Score=280.94 Aligned_cols=365 Identities=22% Similarity=0.298 Sum_probs=284.7
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQML 177 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l 177 (524)
++|+. .|.|++.++++.|+.+++++.|+++||+|.|+++..+.++.++++++...+. ..+++.+++.|++
T Consensus 68 ~~ws~-------~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa---~~~~~~~~~~R~l 137 (466)
T KOG2532|consen 68 YDWSS-------TEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAA---SIGFYLLLVLRFL 137 (466)
T ss_pred ecCCH-------HHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHH---HhcchhhHHHHHH
Confidence 66666 9999999999999999999999999999999999999999999999999872 2455688999999
Q ss_pred HHHhhhcchhhHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhh-h-cCchhHHHHhHHHHHHHHHHHHHhcC
Q 009816 178 AGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL-T-YGWGWSFVVPGLIIAFVGLIVFLFLP 255 (524)
Q Consensus 178 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~-~gwr~~f~~~~~~~~~~~~~~~~~~~ 255 (524)
+|++.|..+|+...+...|.|++||++..++..++..+|.+++-+++|++. . +||+++|++.++++++..++.+++..
T Consensus 138 qGl~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~ 217 (466)
T KOG2532|consen 138 QGLGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYS 217 (466)
T ss_pred hHHHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999898888 4 79999999999999999888888888
Q ss_pred CCCCCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009816 256 VNPESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSH 335 (524)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (524)
|+|.+++....+|.+..+..+..+. ..++...+++++++++.+|.+.+..++.....+.+..++|.|+++
T Consensus 218 d~P~~h~~is~~El~~I~~~k~~~~----------~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~ 287 (466)
T KOG2532|consen 218 DSPSKHPNISEKELKYIEKGKSEAH----------VKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKE 287 (466)
T ss_pred CCcccCCCCCHHHHHHHHhcccccc----------cCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 8888866555444433221111110 011146789999999999999999999999999999999999999
Q ss_pred cccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhh--------HHH-HHHHHHHHHHHHHHHHhhcchhHHHHH
Q 009816 336 TAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDAR--------AIT-AASFMYCAIPALFFYRSYGHLSLALNI 406 (524)
Q Consensus 336 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~--------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (524)
. +|++..+.|++.++..+...+..+++|.++||+.+| |.. .++....++.++.+.+. ...+.+..+
T Consensus 288 V----L~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~-~~~~~~~a~ 362 (466)
T KOG2532|consen 288 V----LGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFT-SDEHRLLAV 362 (466)
T ss_pred H----hCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeec-CCCcchHHH
Confidence 9 899999999999999999999999999999998652 222 22223333333333222 221222222
Q ss_pred HHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhc-cc---ChhHHHHHHH
Q 009816 407 ALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYIS-AT---SWTAVFTMLM 482 (524)
Q Consensus 407 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~-~~---~~~~~~~~~~ 482 (524)
+++ ....+..+...........+.. ++..+..+|+.+.+..+.+.++|.+.|.+. +. .|+.+|.+.+
T Consensus 363 ~~l-~~~~~~~g~~~~Gf~~~~~~~a--------pq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a 433 (466)
T KOG2532|consen 363 ILL-TIAIGLSGFNISGFYKNHQDIA--------PQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAA 433 (466)
T ss_pred HHH-HHHHHHcccchhhhHhhhhhcc--------chHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHH
Confidence 222 2222222222222222222211 477899999999999999999999999998 43 7999999999
Q ss_pred HHHHHHHHHHHHHH
Q 009816 483 AAALISGLLLTRLV 496 (524)
Q Consensus 483 ~~~~~~~~~~~~~~ 496 (524)
++.+++.++..++.
T Consensus 434 ~i~~~~~i~f~~f~ 447 (466)
T KOG2532|consen 434 GILIVGNIIFLFFG 447 (466)
T ss_pred HHHHHhchheeEee
Confidence 99888876655443
No 34
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-33 Score=277.50 Aligned_cols=394 Identities=37% Similarity=0.552 Sum_probs=277.9
Q ss_pred cccchhhHHHHHHHHHHHHHhhccccccc-ccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchh
Q 009816 32 FKNHQAIVLIVTFFAYTSYHAARKTTSIV-KSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTA 110 (524)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 110 (524)
.+|..+.++..++..++..+.++.+++.. +..+.+| .+... .
T Consensus 39 ~~K~dl~i~~~~~~~y~~~~~d~~si~~a~l~g~~ed------------------------------l~~~~-------~ 81 (495)
T KOG2533|consen 39 LRKLDLFILPFLCYLYFHAYLDKSSIVNASLSGLKED------------------------------LKLVG-------N 81 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHhcchhcchhHHHcCCccc------------------------------cchhh-------h
Confidence 34445566666677777888888777653 2223344 44444 8
Q ss_pred hHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHH
Q 009816 111 LLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVV 190 (524)
Q Consensus 111 ~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~ 190 (524)
+++.+.++++++++++.+++|.+.||++..+.+....+++++..++.... +|++.+++.|++.|+.++..+|...
T Consensus 82 ~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~-----~s~~~~ialr~llGl~es~~wP~~~ 156 (495)
T KOG2533|consen 82 QLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAV-----HSFPGLIALRFLLGLFESGGWPGVV 156 (495)
T ss_pred hhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHH-----hhhHHHHHHHHHHHHHhcccchHHH
Confidence 99999999999999999999999999999999998888888888777764 9999999999999999999999999
Q ss_pred HHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhh-------hcCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCC
Q 009816 191 AVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL-------TYGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGT 263 (524)
Q Consensus 191 ~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-------~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (524)
.+++.||.++||+..++++.+..++|.++|++++..+. ..||||.|++.++++++.+++.++++|+.|.+..-
T Consensus 157 ~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~f 236 (495)
T KOG2533|consen 157 AILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWF 236 (495)
T ss_pred HHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChhhccc
Confidence 99999999999999999999999999999999998853 36899999999999999999999999999886533
Q ss_pred CCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCC
Q 009816 264 DTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYL 343 (524)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 343 (524)
..++|+.....+.+.+. +.....+.++..+++.+++|.+|.+.++.++.....+++.+|+|.|+++. .|+
T Consensus 237 l~~~ek~~~~~~~~~~~------~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~----~~~ 306 (495)
T KOG2533|consen 237 LTDEEKELVVERLRESP------SGGIENKFKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSN----GGY 306 (495)
T ss_pred cchHHHHHHHHHHHhcc------CCCcccccCHHHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcC----CCc
Confidence 23222111100000000 00000113567789999999999999999999999999999999999985 689
Q ss_pred ChhhhhhHHHHHHHHHHhhhHHHHHHHhh----hhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhh
Q 009816 344 SSEMAGNLSTLFDVGGVLGGILAGHISDR----LDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGP 419 (524)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 419 (524)
+..++..+..+..++++++.+++|+++|| ..+|........+......+.... ...........+....+....
T Consensus 307 s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~l~~--~~~~~~~~~~~~~~~~~~~~~ 384 (495)
T KOG2533|consen 307 SELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAISLLA--AAVLPGAYGAFLIGPYGLIAT 384 (495)
T ss_pred ChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHh--hccchHHhHHHHhcchhhHHH
Confidence 99999999999999999999999999999 455554444444443333222221 111222222222222333333
Q ss_pred hHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhh-hhHhhccc-ChhHHHHHHHHHHH
Q 009816 420 YALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPL-LTGYISAT-SWTAVFTMLMAAAL 486 (524)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~-~~g~l~~~-~~~~~~~~~~~~~~ 486 (524)
.+........... ++.+..++. ++.....+.++.++|. ..+..... .+...|....+.++
T Consensus 385 ~~~~~~w~s~~~~------g~~k~~~~~-~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f~~~~~~~~ 446 (495)
T KOG2533|consen 385 AIIALSWTSANLA------GNTKALTTV-SAIIDGTGSAGAISGQLFRSLDAPRYGWGAVFYMLVAACV 446 (495)
T ss_pred HHHHHhhcccccc------chHHhHHHH-hhhhcchhHHHHhhhhhcccccCcchhhhhHHHHHHHHHH
Confidence 4444444444443 333443333 3344444444444444 34433343 66667744444333
No 35
>PRK03893 putative sialic acid transporter; Provisional
Probab=100.00 E-value=1.8e-33 Score=287.07 Aligned_cols=393 Identities=17% Similarity=0.208 Sum_probs=274.7
Q ss_pred ccchhhHHHHHHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhhH
Q 009816 33 KNHQAIVLIVTFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTALL 112 (524)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 112 (524)
++.+|+.+..++++++.+.++....+...|.+.++ +|+++ .+.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~------------------------------~~~s~-------~~~ 57 (496)
T PRK03893 15 NRAQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGE------------------------------FGLTT-------VQA 57 (496)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------------hCCCH-------HHH
Confidence 35677888899999999999999999999998888 88877 899
Q ss_pred hHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHHH
Q 009816 113 GELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVAV 192 (524)
Q Consensus 113 g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~ 192 (524)
+++.+.+.+++.+++++.|+++||+|||++++.+.++.+++.++++++ ++++.+++.|++.|++.+...+....+
T Consensus 58 ~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~~l~G~~~~~~~~~~~~~ 132 (496)
T PRK03893 58 ASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFA-----PGYWTLFIARLVIGMGMAGEYGSSATY 132 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH-----hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999986 899999999999999999999999999
Q ss_pred HhhccccccccceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCcccccc
Q 009816 193 VGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNEEDES 271 (524)
Q Consensus 193 i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (524)
+.|++|+++|++++++...+..+|..++|.+++.+. .++||+.|++.++ .++..+.....+||.++....++..++.
T Consensus 133 ~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~- 210 (496)
T PRK03893 133 VIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGIL-PIIFALWLRKNLPEAEDWKEKHAGKAPV- 210 (496)
T ss_pred HHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHH-HHHHHHHHHHhCCCchhhhhhccccccc-
Confidence 999999999999999999999999999999999887 5799999987443 3333333444455543321111000000
Q ss_pred CCccccCCCcccccccchhhhhhhhh------hHHHHh----------------------------cCCCc---HHHHHH
Q 009816 272 LSPKKIGEGVTQPLLRRETKIEEKAV------GFIEAW----------------------------KIPGV---APFALC 314 (524)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~----------------------------~~~~~---~~~~~~ 314 (524)
++.. +...+.+.+...... .....+ +.++. ......
T Consensus 211 ---~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (496)
T PRK03893 211 ---RTMV----DILYRGEHRIINILLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVV 283 (496)
T ss_pred ---hhHH----HHHhcchhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHH
Confidence 0000 000000000000000 000000 00000 000111
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHH
Q 009816 315 LFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFY 394 (524)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~ 394 (524)
.+......+....++|.|+++. +|++..+.+.+.+...++.++++++.|++.||+++|+.+..+..+..+..+.+.
T Consensus 284 ~~~~~~~~~~~~~~lp~~l~~~----~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~ 359 (496)
T PRK03893 284 VLFAFLYSWPIQALLPTYLKTD----LGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVF 359 (496)
T ss_pred HHHHHhccchHHHHHHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHh
Confidence 1111111123457899999765 799999999999999999999999999999999999987776655444433332
Q ss_pred HhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-C
Q 009816 395 RSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-S 473 (524)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~ 473 (524)
.. ...+.+......++.++...+..+.....+.+.+| ++.+++++|+.+....+|+.++|.+.|.+.|. +
T Consensus 360 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g 430 (496)
T PRK03893 360 AI-GGANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFD--------TEQRAAGLGFTYNVGALGGALAPILGALIAQRLD 430 (496)
T ss_pred hc-cccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCC--------HHHhhcccchhhhhhhHHHHHHHHHHHHHhccCC
Confidence 21 22232333333333333333334455566667666 36679999999999999999999999999998 8
Q ss_pred hhHHHHHHHHHHHHHH
Q 009816 474 WTAVFTMLMAAALISG 489 (524)
Q Consensus 474 ~~~~~~~~~~~~~~~~ 489 (524)
+...+...++.+.+..
T Consensus 431 ~~~~~~~~~~~~~~~~ 446 (496)
T PRK03893 431 LGTALASLSFSLTFVV 446 (496)
T ss_pred hHHHHHHHHHHHHHHH
Confidence 8877766554444333
No 36
>PRK15075 citrate-proton symporter; Provisional
Probab=100.00 E-value=3.5e-33 Score=279.05 Aligned_cols=359 Identities=13% Similarity=0.068 Sum_probs=248.1
Q ss_pred chhhHHHHHHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhhHhH
Q 009816 35 HQAIVLIVTFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTALLGE 114 (524)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~ 114 (524)
.|++.....+++.+..++|+..++++.|.+.+| ++.++ .+.+.
T Consensus 12 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~------------------------------~~~~~-------~~~~~ 54 (434)
T PRK15075 12 SKARAILRVTSGNFLEMFDFFLFGFYATAIAKT------------------------------FFPAG-------NEFAS 54 (434)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------------hCCCC-------CchHH
Confidence 445578888999999999999999999999998 77665 44433
Q ss_pred -HHHHH-----HHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHH--------HHHHHHHHHHH
Q 009816 115 -LDLAF-----LSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFY--------YYLVVQMLAGL 180 (524)
Q Consensus 115 -~~s~~-----~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~--------~~~~~r~l~G~ 180 (524)
..+.. .++..+++++.|+++||+|||++++.+.++++++.++++++ ++++ .+++.|+++|+
T Consensus 55 ~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~l~~~R~l~G~ 129 (434)
T PRK15075 55 LMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLIAFV-----PGYATIGLAAPLLVLLGRLLQGF 129 (434)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHhC-----CcHHHHHHHHHHHHHHHHHHhhc
Confidence 23322 23335789999999999999999999999999999999997 7766 46899999999
Q ss_pred hhhcchhhHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhh---------hcCchhHHHHhHHHHHHHHHHHH
Q 009816 181 FQSTGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL---------TYGWGWSFVVPGLIIAFVGLIVF 251 (524)
Q Consensus 181 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~---------~~gwr~~f~~~~~~~~~~~~~~~ 251 (524)
+.+...+....+++|++|+++|++++++...+.++|..+++.+++.+. ++|||++|++.++.. +......
T Consensus 130 ~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~-~~~~~~~ 208 (434)
T PRK15075 130 SAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCLIV-PFIFLIR 208 (434)
T ss_pred cccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHH-HHHHHHH
Confidence 999999999999999999999999999999998888888888877652 479999998754332 2211111
Q ss_pred HhcCCCCCCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHH-HHHHHHHHHHHHHHHHHH
Q 009816 252 LFLPVNPESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFA-LCLFFAKLVAYTFLYWLP 330 (524)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 330 (524)
...||+++.. +++ ++. +....++...++++.+... +..++.....+....+.|
T Consensus 209 ~~~~e~~~~~-----~~~-----~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 262 (434)
T PRK15075 209 RSLEETEEFL-----ARK-----HRP----------------SMREIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTP 262 (434)
T ss_pred HhcCCCHHHH-----Hhh-----hcc----------------ccccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222211000 000 000 0001122233444333332 223334455667788999
Q ss_pred HHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHH-HHHhhcchhHHHHHHHH
Q 009816 331 FYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALF-FYRSYGHLSLALNIALM 409 (524)
Q Consensus 331 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 409 (524)
.|+++. +|++..+.++......++.+++.++.|+++||++||+.+..+.....+.... +.......+........
T Consensus 263 ~~l~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (434)
T PRK15075 263 TFGKTV----LHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAVE 338 (434)
T ss_pred HHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHH
Confidence 999987 7999999988888889999999999999999999999876654443322211 11111222222223333
Q ss_pred HHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhh-hhhhhhhhhhHhhccc-Ch
Q 009816 410 FITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGS-VGAAIGPLLTGYISAT-SW 474 (524)
Q Consensus 410 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~-~g~~i~~~~~g~l~~~-~~ 474 (524)
++.+++.+...+.......+.+|+ +.|+++.|+.+.+.. +++.++|.+.|++.|. ++
T Consensus 339 ~~~~~~~g~~~~~~~~~~~e~~p~--------~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~ 397 (434)
T PRK15075 339 LWLSFLYGSYNGAMVVALTEVMPA--------EVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGD 397 (434)
T ss_pred HHHHHHHHHHHhhHHHHHHHHCCC--------CccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCC
Confidence 444555555555555666777764 567888888655544 4588899999999987 54
No 37
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=100.00 E-value=1.9e-32 Score=271.24 Aligned_cols=365 Identities=11% Similarity=0.017 Sum_probs=270.4
Q ss_pred HHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhhHhHHHHHHHHH
Q 009816 43 TFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTALLGELDLAFLSI 122 (524)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~s~~~l~ 122 (524)
+.+..+...+....+.+.+|.+.++ +|.+. .+.++..+++.++
T Consensus 21 ~~~~~~~~~~~~~~~~p~l~~i~~~------------------------------~~~~~-------~~~~~~~s~~~~~ 63 (413)
T PRK15403 21 LILYDFAAYLTTDLIQPGIINVVRD------------------------------FNADV-------SLAPASVSLYLAG 63 (413)
T ss_pred HHHHHHHHHHHHHhhccCHHHHHHH------------------------------hCCCH-------HHHHHHHHHHHHH
Confidence 3444445666667777777777777 77777 8899999999999
Q ss_pred HHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHHHHhhccccccc
Q 009816 123 YAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVAVVGNWFGKSKR 202 (524)
Q Consensus 123 ~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 202 (524)
+.++++++|+++||+|||++++.+.++++++.++++++ ++++.+++.|+++|++.+...+....++.|++|+++|
T Consensus 64 ~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a-----~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~ 138 (413)
T PRK15403 64 GMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFT-----TSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKG 138 (413)
T ss_pred HHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH
Confidence 99999999999999999999999999999999999997 8999999999999999887777778889999999999
Q ss_pred cceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCccccccCCccccCCCc
Q 009816 203 GLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNEEDESLSPKKIGEGV 281 (524)
Q Consensus 203 ~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (524)
++++++......+|..+||.+++.+. +.|||+.|++.+++.++..+..++.+||+++..++ + .
T Consensus 139 ~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~~~~~-~-------~-------- 202 (413)
T PRK15403 139 IKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPETVKRGAV-P-------F-------- 202 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCccccCC-C-------C--------
Confidence 99999999999999999999999888 46999999999988777766556667775431100 0 0
Q ss_pred ccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHh
Q 009816 282 TQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVL 361 (524)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 361 (524)
..++....++++++||.++...+..++.....+.+..+.|.++++. +|+++.+.++.......+.++
T Consensus 203 ---------~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~----~g~s~~~~gl~~~~~~~~~~i 269 (413)
T PRK15403 203 ---------SAKSVLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDA----GGMTTSQFAWTQVPVFGAVIV 269 (413)
T ss_pred ---------ChHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHh----cCCCHHHHHHHHHHHHHHHHH
Confidence 0001233567788999999888887777777778888899999987 799999999998888888888
Q ss_pred hhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHh--hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCC
Q 009816 362 GGILAGHISDRLDARAITAASFMYCAIPALFFYRS--YGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKG 439 (524)
Q Consensus 362 ~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (524)
+..+.+++.++..+++.......+..++..++... ....+.+..+...++.+++.+...+....... .+.
T Consensus 270 ~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~p~~~~~al--~~~------ 341 (413)
T PRK15403 270 ANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWPHVWLWSVLGTSLYAFGIGLIFPTLFRFTL--FSN------ 341 (413)
T ss_pred HHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHhHHHHHHHh--ccC------
Confidence 88888887655444443322222222222221110 01222323345556666666666555553221 111
Q ss_pred CccchhHHHHHHHhhhhhhhhhhhhhhHhhcccChhHHHHHHHHHHHH
Q 009816 440 NSRALATVTAIIDGTGSVGAAIGPLLTGYISATSWTAVFTMLMAAALI 487 (524)
Q Consensus 440 ~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~ 487 (524)
...+|++.++.+.....+..+++...+++.+.+-...|...++++.+
T Consensus 342 -~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 388 (413)
T PRK15403 342 -NLPKGTVSASLNMVILMVMAVSVEIGRWLWFNGGRLPFHLLAVVAGV 388 (413)
T ss_pred -CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHH
Confidence 12358999999999989999999999998877666666666555443
No 38
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=100.00 E-value=1.7e-33 Score=286.69 Aligned_cols=380 Identities=16% Similarity=0.212 Sum_probs=299.7
Q ss_pred hHHHHHHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhhHhHHHH
Q 009816 38 IVLIVTFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTALLGELDL 117 (524)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~s 117 (524)
+++..++++.+...++....+...|.+.++ +|.+. .+.+++.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~------------------------------~g~s~-------~~~~~~~~ 44 (485)
T TIGR00711 2 LLTIVLMLGTFMAVLDSTIVNVAIPTIAGD------------------------------LGSSL-------SQVQWVIT 44 (485)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------------------------------cCCCh-------hhhhHHHH
Confidence 356677788888999999999999999888 78777 88999999
Q ss_pred HHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHHHHhhcc
Q 009816 118 AFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVAVVGNWF 197 (524)
Q Consensus 118 ~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~ 197 (524)
.+.++..++.++.|+++||+|||++++++.++.+++.++++++ ++++.+++.|+++|++.+...+...+++.|++
T Consensus 45 ~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~ 119 (485)
T TIGR00711 45 SYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVA-----PNLELMIIFRVIQGFGGGPLIPLSFSTLLNIY 119 (485)
T ss_pred HHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCc-----CCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHC
Confidence 9999999999999999999999999999999999999999997 89999999999999999999999999999999
Q ss_pred ccccccceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCcccccc-----
Q 009816 198 GKSKRGLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNEEDES----- 271 (524)
Q Consensus 198 ~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 271 (524)
|+++|++++++...+..+|..+||.+++.+. +++||+.|++.+++.++..++.++.+|++++.... +.+....
T Consensus 120 ~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~g~~l~~~ 198 (485)
T TIGR00711 120 PPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPAASE-NFDFLGLLLLSV 198 (485)
T ss_pred CHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCccccccC-CCcHHHHHHHHH
Confidence 9999999999999999999999999999988 57999999998888877767677777764332211 1110000
Q ss_pred -------CCccccCCCcccc-cc--------------cchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHH
Q 009816 272 -------LSPKKIGEGVTQP-LL--------------RRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWL 329 (524)
Q Consensus 272 -------~~~~~~~~~~~~~-~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (524)
...+.+..+...+ .. ..++..++++....+.+++|.++...+..++..+..+....++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (485)
T TIGR00711 199 GLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTDDNPLVDLRLFKYRNFTIGCVYMSLLGLGLYGSFYLL 278 (485)
T ss_pred HHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCCCCccCHHHHcCCChHHHHHHHHHHHHHHHHHHHHH
Confidence 0000000000000 00 0000001111222467889999888888888888888888999
Q ss_pred HHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHH-hhcchhHHHHHHH
Q 009816 330 PFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYR-SYGHLSLALNIAL 408 (524)
Q Consensus 330 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 408 (524)
|.|+++. +|+++.++++......++.+++.++.|++.||+++|+.+..+..+..++...+.. ..+..+.+.....
T Consensus 279 p~~~~~~----~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (485)
T TIGR00711 279 PLYLQQV----LGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIALP 354 (485)
T ss_pred HHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHH
Confidence 9999987 7999999999999999999999999999999999999888877776666655542 2223344555556
Q ss_pred HHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc
Q 009816 409 MFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT 472 (524)
Q Consensus 409 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 472 (524)
.++.|++.+...++......+.+| ++.++++.|+.+..+.+|+.+|+.+.+.+.++
T Consensus 355 ~~l~g~g~~~~~~~~~~~~~~~~~--------~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 355 QFIRGFGMGCFFMPLTTIALSGLP--------PHKIARGSSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCC--------HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777888887777777776666666 47789999999999999999999999998875
No 39
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=7.9e-34 Score=288.48 Aligned_cols=424 Identities=13% Similarity=0.069 Sum_probs=277.3
Q ss_pred cchhhHHHHHHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhhHh
Q 009816 34 NHQAIVLIVTFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTALLG 113 (524)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g 113 (524)
+...+...++.++.+...++...++...|.+++++.+ ... ..+++++ .+.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~-------~~~~~~~-------~~~~ 58 (479)
T PRK10077 8 SYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVA---------------PQN-------LSESAAN-------SLLG 58 (479)
T ss_pred hHHHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcc---------------ccc-------ccccCCh-------hHHH
Confidence 4456666777778888888988888888877776311 000 0035554 8999
Q ss_pred HHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhcccc-------ccchhHHHHHHHHHHHHHhhhcch
Q 009816 114 ELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYW-------GNVHSFYYYLVVQMLAGLFQSTGW 186 (524)
Q Consensus 114 ~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~-------~~~~~~~~~~~~r~l~G~~~~~~~ 186 (524)
++.+.+.++..++++++|+++||+|||++++++.++++++.++++++.. .+.+.++.+++.|+++|++.|...
T Consensus 59 ~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~ 138 (479)
T PRK10077 59 FCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLAS 138 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHh
Confidence 9999999999999999999999999999999999999988887775310 112346778899999999999999
Q ss_pred hhHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhh---------hcCchhHHHHhHHHHHHHHHHHHHhcCCC
Q 009816 187 PSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL---------TYGWGWSFVVPGLIIAFVGLIVFLFLPVN 257 (524)
Q Consensus 187 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~---------~~gwr~~f~~~~~~~~~~~~~~~~~~~~~ 257 (524)
+...++++|++|+++|++++++.+.+..+|.++++.+++.+. .+|||+.|++.+++.++. ++..+++||+
T Consensus 139 ~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~-~~~~~~l~~s 217 (479)
T PRK10077 139 MLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLF-LMLLYFVPET 217 (479)
T ss_pred hHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHH-HHHHHcCCCC
Confidence 999999999999999999999999999999999988876553 358999999988777665 4456778988
Q ss_pred CCCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHH-HhcCCCcH-----HHHHHH----HHHHHHHHHHHH
Q 009816 258 PESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIE-AWKIPGVA-----PFALCL----FFAKLVAYTFLY 327 (524)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-----~~~~~~----~~~~~~~~~~~~ 327 (524)
|++...+++.++.....++..... + .+...++.....+. ..+.+..+ ...... +..........+
T Consensus 218 ~~~l~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (479)
T PRK10077 218 PRYLMSRGKQEQAEGILRKIMGNT-L----ATQALQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLY 292 (479)
T ss_pred cHHHHHcCCHHHHHHHHHHHcCCh-h----HHHHHHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHH
Confidence 764322211111100000000000 0 00000000000000 00001110 011110 111111223345
Q ss_pred HHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcch-hHHHHH
Q 009816 328 WLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHL-SLALNI 406 (524)
Q Consensus 328 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 406 (524)
+.|.+.++ .|.+.....+.....++..+++.++.++++||++||+.+..+..+.+++.+.+....... ......
T Consensus 293 ~~p~i~~~-----~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~ 367 (479)
T PRK10077 293 YAPEIFKT-----LGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVAL 367 (479)
T ss_pred HHHHHHHH-----cCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHH
Confidence 66777666 488877777777788889999999999999999999999888887777665554321111 111222
Q ss_pred HHHHHHHhhhhhh-hHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhc------cc-ChhHHH
Q 009816 407 ALMFITGMFVNGP-YALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYIS------AT-SWTAVF 478 (524)
Q Consensus 407 ~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~------~~-~~~~~~ 478 (524)
...++.+++.+.. .+.....+.+.+| ++.|+++.|+.+....++.++++.+.+.+. +. ++...|
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~e~~p--------~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~ 439 (479)
T PRK10077 368 LSMLFYVAAFAMSWGPVCWVLLSEIFP--------NAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSY 439 (479)
T ss_pred HHHHHHHHHHhccccchhHHHhHhhCC--------hhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHH
Confidence 2333344333332 2455677777776 367899999999999999999877766554 33 667778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhc
Q 009816 479 TMLMAAALISGLLLTRLVVAEVAAKFVE 506 (524)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (524)
++.+++++++.++.+ +..+|++++..+
T Consensus 440 ~~~~~~~~~~~~~~~-~~~~e~~~~~~~ 466 (479)
T PRK10077 440 WIYGCMGVLAALFMW-KFVPETKGKTLE 466 (479)
T ss_pred HHHHHHHHHHHHHHH-hccccCCCCCHH
Confidence 777766666555443 334555554433
No 40
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=100.00 E-value=4.3e-32 Score=267.92 Aligned_cols=345 Identities=17% Similarity=0.153 Sum_probs=268.6
Q ss_pred HHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhhHhHHHHHHHHHHHhh
Q 009816 47 YTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTALLGELDLAFLSIYAGG 126 (524)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~s~~~l~~~~~ 126 (524)
.+........+.+..|.+.++ +|+++ .+.+++.+.+.++..++
T Consensus 14 ~~~~~~~~~~~~~~~p~~~~~------------------------------~g~s~-------~~~g~~~~~~~~~~~~~ 56 (385)
T TIGR00710 14 SILGPLGIDMYLPAFPEIAAD------------------------------LSTPA-------SIVQMTLTLYLLGFAAG 56 (385)
T ss_pred HHHHHHHHHHhcccHHHHHHH------------------------------hCCCH-------HHHHHHHHHHHHHHHHH
Confidence 344455556666677877777 78777 99999999999999999
Q ss_pred hhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHHHHhhcccccccccee
Q 009816 127 MFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVAVVGNWFGKSKRGLIM 206 (524)
Q Consensus 127 ~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~ 206 (524)
++++|+++||+|||+++..+.++.+++.+++.++ ++++.+++.|++.|++.+...+...+++.|++|+++|++++
T Consensus 57 ~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (385)
T TIGR00710 57 QLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALS-----NNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIY 131 (385)
T ss_pred HHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHH-----ccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHH
Confidence 9999999999999999999999999999999886 89999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCccccccCCccccCCCccccc
Q 009816 207 GIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNEEDESLSPKKIGEGVTQPL 285 (524)
Q Consensus 207 ~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (524)
++.+....+|..++|.+++.+. +++||+.|++.+++.++..+..++..||+++...+.
T Consensus 132 ~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------- 190 (385)
T TIGR00710 132 SILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETLPYEARI--------------------- 190 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcccC---------------------
Confidence 9999999999999999999887 579999999988887777666666666643321100
Q ss_pred ccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHH
Q 009816 286 LRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGIL 365 (524)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 365 (524)
+.++....+++.+++|+++...+...+..........+.|.++++. +|.++.+.+.+.....++.++++++
T Consensus 191 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~g~~~~~~g~~~~~~~~~~~~~~~~ 261 (385)
T TIGR00710 191 -----QISTYFETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDI----MGVSPSVFGLLFALNIIAMIFGGFL 261 (385)
T ss_pred -----CHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHH----cCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 0001223456778899988877776666666777778889888876 7999999999999999999999999
Q ss_pred HHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhh--cchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccc
Q 009816 366 AGHISDRLDARAITAASFMYCAIPALFFYRSY--GHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRA 443 (524)
Q Consensus 366 ~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (524)
.|++.||+++|+.+..+..+..+....+.... .............+.|++.+...+.......+..| +.
T Consensus 262 ~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~---------~~ 332 (385)
T TIGR00710 262 NGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP---------HV 332 (385)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc---------cc
Confidence 99999999999988777666555544443221 11223333444556677666666666665555443 45
Q ss_pred hhHHHHHHHhhhhhhhhhhhhhhHhhccc
Q 009816 444 LATVTAIIDGTGSVGAAIGPLLTGYISAT 472 (524)
Q Consensus 444 ~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 472 (524)
++++.++.+.....++.+.+.+.+.+.+.
T Consensus 333 ~g~~~~~~~~~~~~~g~i~~~~~~~~~~~ 361 (385)
T TIGR00710 333 AGTASALFGTLRLVLGAIVGYLVSLIHGN 361 (385)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 68999999888877666666666755443
No 41
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=100.00 E-value=4e-32 Score=269.15 Aligned_cols=363 Identities=16% Similarity=0.096 Sum_probs=261.8
Q ss_pred HHHHHHHHHHHhhcccccccccc-cCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhhHhHHHHHH
Q 009816 41 IVTFFAYTSYHAARKTTSIVKST-LDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTALLGELDLAF 119 (524)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~s~~ 119 (524)
..+.+..++.++......+.+|. +.++ +|+++ .+.|++.+++
T Consensus 18 ~~l~~~~~~~~~~~~~~~~~l~~~i~~~------------------------------~g~s~-------~~~g~~~~~~ 60 (399)
T PRK05122 18 VSIVMFTFISYLTIGLPLAVLPGYVHDQ------------------------------LGFSA-------FLAGLVISLQ 60 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh------------------------------cCccH-------HHHHHHHHHH
Confidence 34455555555555555556664 4556 77777 9999999999
Q ss_pred HHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccc---cchhHHHHHHHHHHHHHhhhcchhhHHHHHhhc
Q 009816 120 LSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWG---NVHSFYYYLVVQMLAGLFQSTGWPSVVAVVGNW 196 (524)
Q Consensus 120 ~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~---~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~ 196 (524)
.+++.+++++.|+++||+|||++++.+.++.+++.+++.++... ...+++.+++.|+++|++.+...+...+++.|+
T Consensus 61 ~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~ 140 (399)
T PRK05122 61 YLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGR 140 (399)
T ss_pred HHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhh
Confidence 99999999999999999999999999999888877766553110 013677899999999999999999999999999
Q ss_pred cccccccceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCccccccCCcc
Q 009816 197 FGKSKRGLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNEEDESLSPK 275 (524)
Q Consensus 197 ~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (524)
+|+++|++++++...+..+|.++|+.+++.+. ++||++.+++.+++.++. .+. .++.|+.... + +
T Consensus 141 ~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~-~-~-------- 206 (399)
T PRK05122 141 VGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLG-LLL---ARPRPAVPPV-K-G-------- 206 (399)
T ss_pred cChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHH-HHH---HhcCCCCCCC-C-c--------
Confidence 99999999999999999999999999999887 579999988766554332 211 1222211100 0 0
Q ss_pred ccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHH
Q 009816 276 KIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLF 355 (524)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 355 (524)
+. .++++.++ +++.......+..+.......++|.|+.+. |.+ +.+......
T Consensus 207 -~~------------------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~--~~~~~~~~~ 258 (399)
T PRK05122 207 -ER------------------LPFRRVLG--RVWPYGMGLALASIGFGTIATFITLYYAAR-----GWD--GAALALTLF 258 (399)
T ss_pred -cc------------------hhHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----ccc--cchHHHHHH
Confidence 00 00111121 112222223333444555667888887764 553 456666778
Q ss_pred HHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccc
Q 009816 356 DVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHS 435 (524)
Q Consensus 356 ~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 435 (524)
.++.++++++.|++.||+++|+.+..+..+..++...+.. .++.+..++..++.|++.+..++.......+..|
T Consensus 259 ~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~--- 332 (399)
T PRK05122 259 GVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWL---APSPWMALIGAALTGFGFSLVFPALGVEAVKRVP--- 332 (399)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH---hccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCC---
Confidence 8888999999999999999999887776666655544433 2344455566677888877777766666666665
Q ss_pred cCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-ChhHHHHHHHHHHHHHHHHHH
Q 009816 436 SLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-SWTAVFTMLMAAALISGLLLT 493 (524)
Q Consensus 436 ~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~ 493 (524)
++.+|++.|+.+....+|..++|.+.|++.+. +|+..+++.+++.+++.++..
T Consensus 333 -----~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 386 (399)
T PRK05122 333 -----PQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTW 386 (399)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH
Confidence 47789999999999999999999999999887 999999888877776655544
No 42
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=1.1e-33 Score=287.65 Aligned_cols=411 Identities=14% Similarity=0.080 Sum_probs=269.5
Q ss_pred hhHHHHHHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCC-CCCCCchhhHhHH
Q 009816 37 AIVLIVTFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAP-FNGSDGTALLGEL 115 (524)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~g~~ 115 (524)
+...+++.++.+...++...++...+.+..+ ++.+. .+.+.+..+.+++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~ 76 (481)
T TIGR00879 27 ALLSLIAAIGGLMFGYDTGVIGGALALPAFE------------------------------FKFTSANSDSYSSSLWGLV 76 (481)
T ss_pred HHHHHHHHHHHHhcccccchhhhhhhcHHHH------------------------------HhcCCcccCCCChhHHHHH
Confidence 3334444455556667777777777776665 22220 1111234899999
Q ss_pred HHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHHHHhh
Q 009816 116 DLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVAVVGN 195 (524)
Q Consensus 116 ~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~ 195 (524)
.+++.++..++++++|+++||+|||++++++.++.+++.+++.++ ....+++.+++.|+++|++.+...+...+++.|
T Consensus 77 ~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~ 154 (481)
T TIGR00879 77 VSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLA--AFALSVEMLIVGRVLLGIGVGIASALVPMYLSE 154 (481)
T ss_pred HHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHh--ccccchHHHHHHHHHHHhhhhHHHhHHHHHHHc
Confidence 999999999999999999999999999999999999999888653 112456789999999999999999999999999
Q ss_pred ccccccccceehhhhhhhhhHHHHHHHHH---HHhh-hcCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCcccccc
Q 009816 196 WFGKSKRGLIMGIWNAHTSIGNITGSLVA---SALL-TYGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNEEDES 271 (524)
Q Consensus 196 ~~~~~~r~~~~~~~~~~~~~G~~ig~~l~---~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (524)
++|+++|++++++...+..+|..+++.++ .... ..+||+.|++.++..+ ..++..+++||+|+....+++.++..
T Consensus 155 ~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~ 233 (481)
T TIGR00879 155 IAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAG-LLFLGLFFLPESPRWLVGKGRVEEAR 233 (481)
T ss_pred cCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHH-HHHHHHhcCCCChHHHHHcCChHHHH
Confidence 99999999999999999999999999998 5544 4699999999555444 44556667888765321111111100
Q ss_pred CCccc--cCCCcccccccc--------hhhhhhhhhhHHHHhcC------CCcHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009816 272 LSPKK--IGEGVTQPLLRR--------ETKIEEKAVGFIEAWKI------PGVAPFALCLFFAKLVAYTFLYWLPFYVSH 335 (524)
Q Consensus 272 ~~~~~--~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (524)
....+ ..+.......+. ..+.+.....+.+.++. +.++...+..+...........+.|.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (481)
T TIGR00879 234 KSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFEN 313 (481)
T ss_pred HHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHH
Confidence 00000 000000000000 00000001112222221 111222222222222233445667777766
Q ss_pred cccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHh--hcchh-----HHHHHHH
Q 009816 336 TAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRS--YGHLS-----LALNIAL 408 (524)
Q Consensus 336 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~ 408 (524)
.|++..+.+.......++.+++.++.+++.||++||+.+..+..+..++.+.+... ....+ ....+..
T Consensus 314 -----~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (481)
T TIGR00879 314 -----AGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVF 388 (481)
T ss_pred -----cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHH
Confidence 58888888888889999999999999999999999999888776666655544321 11110 2222222
Q ss_pred HHHHHhhhhhh-hHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-ChhHHHHHHHHHHH
Q 009816 409 MFITGMFVNGP-YALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-SWTAVFTMLMAAAL 486 (524)
Q Consensus 409 ~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~~~~~~~~~~ 486 (524)
..+.+.+.+.. .+.......+.+| ++.++++.|+.+...++|.+++|.+.+++.+. ++...|++.+++++
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~p--------~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~ 460 (481)
T TIGR00879 389 ILLFIAFFAMGWGPVPWVIVSEIFP--------LSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNV 460 (481)
T ss_pred HHHHHHHHHccccCeehhhhhccCC--------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHH
Confidence 22333222222 2333444466665 36789999999999999999999999999887 88888888887777
Q ss_pred HHHHHHH
Q 009816 487 ISGLLLT 493 (524)
Q Consensus 487 ~~~~~~~ 493 (524)
++.++..
T Consensus 461 ~~~i~~~ 467 (481)
T TIGR00879 461 LGLIFVY 467 (481)
T ss_pred HHHHHHh
Confidence 6665554
No 43
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=100.00 E-value=6.7e-32 Score=265.65 Aligned_cols=347 Identities=12% Similarity=0.023 Sum_probs=259.5
Q ss_pred hhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhH
Q 009816 110 ALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSV 189 (524)
Q Consensus 110 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~ 189 (524)
.+.+++.+.+.+++.++++++|+++||+|||++++++.++.+++.+++.++ .+. ++.|+++|++.+...|+.
T Consensus 38 ~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~-----~~~---~~~r~l~G~~~a~~~pa~ 109 (393)
T PRK11195 38 WSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFG-----IHP---LLAYGLVGIGAAAYSPAK 109 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHH-----HHH---HHHHHHHHHHHHHHHHHH
Confidence 889999999999999999999999999999999999999999988887775 443 788999999999999999
Q ss_pred HHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhhhcCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCcccc
Q 009816 190 VAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALLTYGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNEED 269 (524)
Q Consensus 190 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (524)
.+++.|++|+++|++++++.+....+|.++||.+++++.++.|+..+.+.+...++. ++..+.+||++++.+..+.+.
T Consensus 110 ~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~~~~~~~i~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~- 187 (393)
T PRK11195 110 YGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPHAEAALAVCALIYLLA-ALFNLFIPRLGARRPGQSWNP- 187 (393)
T ss_pred HHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCCCcccccccCCCH-
Confidence 999999999999999999999999999999999999998767888887766544333 445566776543221110000
Q ss_pred ccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhh
Q 009816 270 ESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAG 349 (524)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 349 (524)
....++....++.++++|.++.......+.+.........+|.|+++. +|.++.+.|
T Consensus 188 -------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----lg~s~~~~G 244 (393)
T PRK11195 188 -------------------IALLRDFFHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVA----LGITLNQPA 244 (393)
T ss_pred -------------------HHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH----cCCChhHHH
Confidence 000011122345678888877655555555555556667778888887 799999999
Q ss_pred hHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHh
Q 009816 350 NLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSA 429 (524)
Q Consensus 350 ~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 429 (524)
++....+++.++++++.+++.||.++++.+..+.. .+.....+.. ..+.+...+..++.|++.+...++..+...+
T Consensus 245 ~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~---~~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~ 320 (393)
T PRK11195 245 YLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMAL---QHSLLPAYPLLILIGALGGFFVVPMNALLQH 320 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHH---HhHHHHHHHHHHHHHHhhhhhhhhHHHHHHh
Confidence 99999999999999999999999888877666543 2222222211 2344445556667788777766666666655
Q ss_pred hhcccccCCCCcc-chhHHHHHHHhhhhhhhhhhhhhhHhhcccChhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009816 430 DLGTHSSLKGNSR-ALATVTAIIDGTGSVGAAIGPLLTGYISATSWTAVFTMLMAAALISGLLLTRLVVAEVA 501 (524)
Q Consensus 430 ~~~~~~~~~~~~~-~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (524)
. ++ ++ .+|++.++.+...+++..++..+.+.+...+.+..+++.+...+++..+...++.+++.
T Consensus 321 ~-~~-------~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (393)
T PRK11195 321 R-GH-------VLVGAGHSIAVQNFNENLAMLLMLGLYSLLVKLGVPVVAVIVGFGLLVALAMALLWRWHRRN 385 (393)
T ss_pred h-Cc-------ccccchhHHHHHhHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4 32 13 36999999999999999999999997765577777877777666666666655544443
No 44
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=100.00 E-value=4e-33 Score=271.82 Aligned_cols=347 Identities=26% Similarity=0.417 Sum_probs=273.2
Q ss_pred HHHHHHHHhhccccccccc-ccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhhHhHHHHHHHHH
Q 009816 44 FFAYTSYHAARKTTSIVKS-TLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTALLGELDLAFLSI 122 (524)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~s~~~l~ 122 (524)
+++.+...++...+.+..| .+.++ +|++. .+.+++.+++.++
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~------------------------------~~~s~-------~~~~~~~~~~~~~ 44 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEE------------------------------LGLSP-------SQIGLLFSAFFLG 44 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCC------------------------------STTTS-------HCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHc------------------------------cCCCH-------HHHHHHHHHHHHH
Confidence 4556666667777777777 77777 88887 9999999999999
Q ss_pred HHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHHHHhhccccccc
Q 009816 123 YAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVAVVGNWFGKSKR 202 (524)
Q Consensus 123 ~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 202 (524)
..+++++.|+++||+|||++++.+.++.+++.++..++ ++++.+++.|++.|++.+...+...+++.|++|+++|
T Consensus 45 ~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~ 119 (352)
T PF07690_consen 45 SALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFA-----SNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEER 119 (352)
T ss_dssp HHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHH-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCH
T ss_pred HHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhh-----hhHHHHhhhccccccccccccccccccccccchhhhh
Confidence 99999999999999999999999999999996666665 6777999999999999999999999999999999999
Q ss_pred cceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCccccccCCccccCCCc
Q 009816 203 GLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNEEDESLSPKKIGEGV 281 (524)
Q Consensus 203 ~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (524)
++++++.....++|.+++|.+++.+. .++||+.|++.+++.++..++...+++++++++..+++.+++
T Consensus 120 ~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~----------- 188 (352)
T PF07690_consen 120 GRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPEPPPPRERESPKESE----------- 188 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---STTTT--SSTTTT-----------
T ss_pred hhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhhcccccccccccccc-----------
Confidence 99999999999999999999999998 679999999999988887665556666554443322211110
Q ss_pred ccccccchhhhhhhhh-hHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCC-hhhhhhHHHHHHHHH
Q 009816 282 TQPLLRRETKIEEKAV-GFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLS-SEMAGNLSTLFDVGG 359 (524)
Q Consensus 282 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~ 359 (524)
++.++... .++...++|.+|......++..+.......++|.|+.+. +|++ ..+.+....+..+..
T Consensus 189 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~~ 256 (352)
T PF07690_consen 189 --------SKKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYLQEV----LGFSGPSQAGLLFSIFGIVG 256 (352)
T ss_dssp ----------HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHH----HHCCTHHHHHHHHHHHHHHH
T ss_pred --------cccccccccccccccccchhhhhhhhhhHHHHHHHHhhcccchhhhhc----cCCCHHHHHHHHHHHHHHHH
Confidence 00001111 245667777777555555666667777889999997776 7899 789999999999999
Q ss_pred HhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCC
Q 009816 360 VLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKG 439 (524)
Q Consensus 360 ~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (524)
++++++.+++.||+++++..........+..+.+.......+..+.+...++.|++.+...+.......+..|
T Consensus 257 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~------- 329 (352)
T PF07690_consen 257 IIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVP------- 329 (352)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCH-------
T ss_pred HHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-------
Confidence 9999999999999998877766666665555554432223345566667778898888888888899888887
Q ss_pred CccchhHHHHHHHhhhhhhhhhhh
Q 009816 440 NSRALATVTAIIDGTGSVGAAIGP 463 (524)
Q Consensus 440 ~~~~~g~~~g~~~~~~~~g~~i~~ 463 (524)
++.+|++.|+.+...+++..++|
T Consensus 330 -~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 330 -PEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp -TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHHHHCC
Confidence 47789999999999999999987
No 45
>PRK10133 L-fucose transporter; Provisional
Probab=100.00 E-value=5.2e-32 Score=269.29 Aligned_cols=368 Identities=14% Similarity=0.094 Sum_probs=276.4
Q ss_pred ccchhhHHHHHHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhhH
Q 009816 33 KNHQAIVLIVTFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTALL 112 (524)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 112 (524)
++..+..+..+++.++...+.+...+...|.++++ +|+++ .+.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~------------------------------~~~s~-------~~~ 63 (438)
T PRK10133 21 SRSYIIPFALLCSLFFLWAVANNLNDILLPQFQQA------------------------------FTLTN-------FQA 63 (438)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------------hCCCH-------HHH
Confidence 34455666777778888888889999999999888 88877 999
Q ss_pred hHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHH---hccccccchhHHHHHHHHHHHHHhhhcchhhH
Q 009816 113 GELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLY---GIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSV 189 (524)
Q Consensus 113 g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~---~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~ 189 (524)
|++.+.+.+++.+++++.|++.||+|||+++..+.++++++.+++ ..+ ++++.+++.|+++|+|.+...+..
T Consensus 64 gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a-----~~~~~ll~~r~l~G~g~g~~~~~~ 138 (438)
T PRK10133 64 GLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEI-----MNYTLFLVGLFIIAAGLGCLETAA 138 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhc-----CCHHHHHHHHHHHHHHHHHHHhhH
Confidence 999999999999999999999999999999999999999999876 344 899999999999999999999999
Q ss_pred HHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhh--h-------------------------cCchhHHHHhHHH
Q 009816 190 VAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL--T-------------------------YGWGWSFVVPGLI 242 (524)
Q Consensus 190 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~--~-------------------------~gwr~~f~~~~~~ 242 (524)
..++.|+.++++|.+.+++.+..+.+|..++|.++..+. . .+||++|+....+
T Consensus 139 ~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v 218 (438)
T PRK10133 139 NPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAI 218 (438)
T ss_pred HHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999887777777899999999999999999876543 0 2566667643333
Q ss_pred HHHHHH-HHHHhcCCCCCCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHH
Q 009816 243 IAFVGL-IVFLFLPVNPESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLV 321 (524)
Q Consensus 243 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (524)
..+..+ +....+||.++++ +.+++ . .+.....++++++|.++...+..++....
T Consensus 219 ~~~~~~~~~~~~~p~~~~~~---~~~~~-------~---------------~~~~~~~~~ll~~~~~~~~~l~~~~~~~~ 273 (438)
T PRK10133 219 VLLVALLIMLTKFPALQSDN---HSDAK-------Q---------------GSFSASLSRLARIRHWRWAVLAQFCYVGA 273 (438)
T ss_pred HHHHHHHHHHhcCCCCCccc---ccccc-------c---------------cchhhhHHHHHhCchHHHHHHHHHHHHHH
Confidence 332222 2222233321110 00000 0 00112245678899888777777777777
Q ss_pred HHHHHHHHHHHH-hhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcch
Q 009816 322 AYTFLYWLPFYV-SHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHL 400 (524)
Q Consensus 322 ~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (524)
......|.+.|+ ++. +|+++.++++.+....++.++++++.+++.||+++|+.+..+..+..+..++... .+
T Consensus 274 ~~~~~~~~~~~l~~~~----~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~-~~-- 346 (438)
T PRK10133 274 QTACWSYLIRYAVEEI----PGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAF-AG-- 346 (438)
T ss_pred HHHHHHHHHHHHhhhc----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH-cC--
Confidence 777778888885 555 7999999999999999999999999999999999999887776665544433332 11
Q ss_pred hHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-C-hhHHH
Q 009816 401 SLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-S-WTAVF 478 (524)
Q Consensus 401 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~-~~~~~ 478 (524)
+. ..+..+.+.|++.+..++...+...+..+. ..+++.++.. ...+|+.++|++.|.+.|. | .+..|
T Consensus 347 ~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~---------~~~~as~l~~-~~~~g~~~~~~i~G~l~~~~g~~~~~~ 415 (438)
T PRK10133 347 GH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQ---------DTKYGSSFIV-MTIIGGGIVTPVMGFVSDAAGNIPTAE 415 (438)
T ss_pred Ch-HHHHHHHHHHHHHHHHHHHHHHHHHcccch---------hhccchhHHh-HHhccchHHHHHHHHHHHhccchHHHH
Confidence 22 234556778999999999999988887753 3456667665 4557899999999999887 5 56666
Q ss_pred HHHHHHH
Q 009816 479 TMLMAAA 485 (524)
Q Consensus 479 ~~~~~~~ 485 (524)
++...+.
T Consensus 416 ~v~~~~~ 422 (438)
T PRK10133 416 LIPALCF 422 (438)
T ss_pred HHHHHHH
Confidence 6544433
No 46
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=100.00 E-value=1.7e-32 Score=268.70 Aligned_cols=328 Identities=16% Similarity=0.143 Sum_probs=258.0
Q ss_pred hhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhH
Q 009816 110 ALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSV 189 (524)
Q Consensus 110 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~ 189 (524)
.+.|++.+++.++..++++++|+++||+|||++++.+.++.+++.++..++......+++.+++.|++.|++.+...+..
T Consensus 34 ~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~ 113 (365)
T TIGR00900 34 SVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAY 113 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999998888888877510001299999999999999999999999
Q ss_pred HHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCccc
Q 009816 190 VAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNEE 268 (524)
Q Consensus 190 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (524)
.+++.|++|+++|++++++.+.+..+|.+++|.+++.+. ..|||+.|++.++..++..+..+...+++++..+. + +
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~- 190 (365)
T TIGR00900 114 QAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVRIPELAASEI-Q-A- 190 (365)
T ss_pred HHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccCCCccc-c-c-
Confidence 999999999999999999999999999999999999987 57999999987776555433333322211111000 0 0
Q ss_pred cccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHH-HHHHHHHhhcccCCCCCChhh
Q 009816 269 DESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFL-YWLPFYVSHTAVDGKYLSSEM 347 (524)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~ 347 (524)
. +++..++....++..+++|.++...+..++......... .+.|.|.++. +|.++.+
T Consensus 191 ----~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 248 (365)
T TIGR00900 191 ----L--------------SNAVLRDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKY----LGRGSTH 248 (365)
T ss_pred ----c--------------chhHHHHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH----hCCchHH
Confidence 0 000011123345667888988887777777766666665 7889999886 6999999
Q ss_pred hhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHH
Q 009816 348 AGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAV 427 (524)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 427 (524)
.+.+.....++.+++.++.+++.||.++++.+..+..+.++....+... .. +.+...+..++.|++.+...+......
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~ 326 (365)
T TIGR00900 249 YGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLT-PP-NFPLFLVLWFAIGVGYGPINVPQGTLL 326 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhh-ch-hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998877665555555444332 11 355566677788888888888888888
Q ss_pred HhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc
Q 009816 428 SADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT 472 (524)
Q Consensus 428 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 472 (524)
.+..| ++.++++.|+.+....++..++|.+.|++.|.
T Consensus 327 ~~~~~--------~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~ 363 (365)
T TIGR00900 327 QRRVP--------AELLGRVFGAQFSLSHAAWPLGLILAGPLADH 363 (365)
T ss_pred HHhCC--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88877 37789999999999999999999999998774
No 47
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=4e-33 Score=284.91 Aligned_cols=366 Identities=17% Similarity=0.213 Sum_probs=264.2
Q ss_pred hhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhH
Q 009816 110 ALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSV 189 (524)
Q Consensus 110 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~ 189 (524)
.+.+++.+++.+++.++++++|+++||+|||++++++.++.+++.++.+++ ++++.+++.|++.|++.+...+..
T Consensus 127 ~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~-----~~~~~~~~~r~l~G~~~~~~~~~~ 201 (505)
T TIGR00898 127 WKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFS-----PNYTVFLVFRLLVGMGIGGIWVQA 201 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHc-----ccHHHHHHHHHHHHhhccchHHHH
Confidence 889999999999999999999999999999999999999999999999997 899999999999999999999999
Q ss_pred HHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhhhcCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCcccc
Q 009816 190 VAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALLTYGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNEED 269 (524)
Q Consensus 190 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (524)
..++.|++|+++|+++.++...+..+|.+++|.+++.+.+ ||+.|++.+++.++..+ ..+++||+|++...+++.++
T Consensus 202 ~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~--wr~~~~~~~i~~~~~~~-~~~~~~esp~~l~~~~~~~~ 278 (505)
T TIGR00898 202 VVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD--WRWLQLAVSLPTFLFFL-LSWFVPESPRWLISQGRIEE 278 (505)
T ss_pred HHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH--HHHHHHHHHHHHHHHHH-HHHhcCCChHHHHHCCCHHH
Confidence 9999999999999999999999999999999999877654 99999998887776644 44778998876433332222
Q ss_pred ccCCccc----cCCCccccc--c--cchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCC
Q 009816 270 ESLSPKK----IGEGVTQPL--L--RRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGK 341 (524)
Q Consensus 270 ~~~~~~~----~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (524)
..+..++ ......... . +++...++++..+++++++|.++...+...+.++......+.++.+..+ .
T Consensus 279 a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 353 (505)
T TIGR00898 279 ALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGN-----L 353 (505)
T ss_pred HHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHhccccc-----c
Confidence 1110000 000000000 0 0000011112467788899988777666655544444333444444443 3
Q ss_pred CCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhH
Q 009816 342 YLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYA 421 (524)
Q Consensus 342 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 421 (524)
+.+.. ......++..+++.++.+++.||+|||+.+..+.++.+++.+++... +....+......++.+++....++
T Consensus 354 ~~~~~---~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 429 (505)
T TIGR00898 354 GGNIY---LDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFV-PVDLYFLRTALAVLGKFGITSAFQ 429 (505)
T ss_pred CCChH---HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHc-CCCchHHHHHHHHHHHHHHHHHHH
Confidence 44433 33345567788899999999999999999888877777666555443 222223444455556666667777
Q ss_pred HHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhcccChhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009816 422 LITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISATSWTAVFTMLMAAALISGLLLTRLVVAEVA 501 (524)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (524)
....+..+.+|+ +.|+++.|+.+.+..+|++++|.+.+ +.+.++...+.+.+++.+++.++..+ .+|++
T Consensus 430 ~~~~~~~e~~p~--------~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--lpet~ 498 (505)
T TIGR00898 430 MVYLYTAELYPT--------VVRNLGVGVCSTMARVGSIISPFLVY-LGEKWLFLPLVLFGGLALLAGILTLF--LPETK 498 (505)
T ss_pred HHHHHhcccccH--------HHHhhhHhHHHHHHHHHHHHHhHHHH-HHHHHHhhHHHHHHHHHHHHHHHHHc--CcCCC
Confidence 777888888874 67799999999999999999999998 55556666777777766666555443 24544
Q ss_pred hh
Q 009816 502 AK 503 (524)
Q Consensus 502 ~~ 503 (524)
++
T Consensus 499 ~~ 500 (505)
T TIGR00898 499 GV 500 (505)
T ss_pred CC
Confidence 43
No 48
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=100.00 E-value=1.3e-31 Score=263.62 Aligned_cols=339 Identities=17% Similarity=0.180 Sum_probs=256.6
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHH-HHHHHHHHHHHHHhccccccchhHHHHHHHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLT-VGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQM 176 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~-~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~ 176 (524)
+|+++ .+.|++.+.+.+...+.+++.|+++||+||||.++ .+.++..++.++++++ ++++.+++.|+
T Consensus 28 ~g~s~-------~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~~ 95 (375)
T TIGR00899 28 VRARP-------AMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWN-----RNYFLLLVLGV 95 (375)
T ss_pred cCCCH-------HHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhc-----chHHHHHHHHH
Confidence 78777 99999999999999999999999999999988755 4566666777788886 89999999999
Q ss_pred HHHHhhhcchhhHHHHHhhccccccccce--ehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHHh
Q 009816 177 LAGLFQSTGWPSVVAVVGNWFGKSKRGLI--MGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFLF 253 (524)
Q Consensus 177 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~--~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~ 253 (524)
+.|.+.+...|...+++.|+.|+++|++. .+....+.++|.++||++++.+. .+|||+.|++.+++.++..++.+++
T Consensus 96 ~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~ 175 (375)
T TIGR00899 96 LLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLF 175 (375)
T ss_pred HHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHh
Confidence 99988888888888999999887777654 57788888999999999999887 5799999999988877777777777
Q ss_pred cCCCCCCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009816 254 LPVNPESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYV 333 (524)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (524)
+||.|++...++ . ..+.++.+++|+++......++..........++|.|+
T Consensus 176 ~~~~~~~~~~~~-------~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (375)
T TIGR00899 176 LPSYPRGAPGAL-------T----------------------RLEVRGLLASRDTRLLFVACTLMWGCNILYIINMPLLI 226 (375)
T ss_pred CCCcccCccccc-------C----------------------cchhhhhhcCcchHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 887654321100 0 00112345667776665555555554555667788888
Q ss_pred hhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 009816 334 SHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITG 413 (524)
Q Consensus 334 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 413 (524)
++. +|.++.+.+.+.....+..+++.++.|++.||+++|+.+..+.....+....... .++.+.......+.|
T Consensus 227 ~~~----~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g 299 (375)
T TIGR00899 227 IHE----LGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAA---DNSLWALLMLQLLNA 299 (375)
T ss_pred HHH----cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
Confidence 776 7999999998887777778888999999999999999877665544433322221 234444455556667
Q ss_pred hhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-ChhHHHHHHHHHHHHHHHHH
Q 009816 414 MFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-SWTAVFTMLMAAALISGLLL 492 (524)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~ 492 (524)
++.+...+.......+..| +.++++.++.+...++|..++|.+.|++.+. +|+..|++.+++.+++.++.
T Consensus 300 ~~~g~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 370 (375)
T TIGR00899 300 IFIGILAGIGMLYFQDLMP---------GRAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCL 370 (375)
T ss_pred HHHHHHHHHHHHHHHHhCc---------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHH
Confidence 7766666666666655544 3357899999999999999999999999887 89999988887776665554
Q ss_pred H
Q 009816 493 T 493 (524)
Q Consensus 493 ~ 493 (524)
.
T Consensus 371 ~ 371 (375)
T TIGR00899 371 L 371 (375)
T ss_pred h
Confidence 3
No 49
>PRK10489 enterobactin exporter EntS; Provisional
Probab=100.00 E-value=1.3e-32 Score=273.96 Aligned_cols=354 Identities=18% Similarity=0.170 Sum_probs=261.4
Q ss_pred hhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhH
Q 009816 110 ALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSV 189 (524)
Q Consensus 110 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~ 189 (524)
.+.|++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.++.+.......++++.+++.|++.|++.+...++.
T Consensus 52 ~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~ 131 (417)
T PRK10489 52 LQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTAL 131 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999988887777665542100012678999999999999998888999
Q ss_pred HHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCccc
Q 009816 190 VAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNEE 268 (524)
Q Consensus 190 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (524)
.+++.|++|+++|+++.++.....++|..+||.+++.+. ..+|++.|++.++..++. ++..+.+|+.++++..++
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~--- 207 (417)
T PRK10489 132 LAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFIT-LLPLLRLPALPPPPQPRE--- 207 (417)
T ss_pred hhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHH-HHHHHhCCCCCCCCcccc---
Confidence 999999999999999999999999999999999999887 568999999877665554 444555665432210000
Q ss_pred cccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhh
Q 009816 269 DESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMA 348 (524)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 348 (524)
+ ..++....++..+++|.++...+..++... ......++|.|.++. +|.++.+.
T Consensus 208 --------------~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~----~g~~~~~~ 261 (417)
T PRK10489 208 --------------H-------PLRSLLAGFRFLLASPVVGGIALLGGLLTM-ASAVRVLYPALADEV----WQMGAAQI 261 (417)
T ss_pred --------------c-------chHHHHHHHHHHHcChHHHHHHHHHHHHHH-HHhHHHhhHHHHHhc----cCCChhHh
Confidence 0 000112234556777776655554443332 345677899999986 79999999
Q ss_pred hhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHH
Q 009816 349 GNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVS 428 (524)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 428 (524)
+++.+...++.+++.++.+++.||.++++.+..+..+..+..+.+.. .++.+...+..++.|++.+...+...+.+.
T Consensus 262 g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 338 (417)
T PRK10489 262 GLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGL---MPMWILAVLCLALFGYLSAISSLLQYTLLQ 338 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHc---cchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999977777766666555544443322 234445556666677766655555566667
Q ss_pred hhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-ChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 009816 429 ADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-SWTAVFTMLMAAALISGLLLTRLVVAEVAAKFV 505 (524)
Q Consensus 429 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (524)
+..| ++.+|++.|+.+....+|..+||.+.|++.+. ++...+...+++.++..++... ..++.|++++
T Consensus 339 ~~~p--------~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 407 (417)
T PRK10489 339 TQTP--------DEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLL-VLGELRRFRQ 407 (417)
T ss_pred hhCC--------HHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH-hccccccccc
Confidence 7666 36789999999999999999999999999998 7777777776665554444432 3344444333
No 50
>TIGR00895 2A0115 benzoate transport.
Probab=100.00 E-value=4e-32 Score=269.37 Aligned_cols=379 Identities=25% Similarity=0.331 Sum_probs=279.4
Q ss_pred ccchhhHHHHHHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhhH
Q 009816 33 KNHQAIVLIVTFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTALL 112 (524)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 112 (524)
++++|..+...++.++....+....+...|.+.++ +|+++ .+.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~-------~~~ 54 (398)
T TIGR00895 12 SRYQWRAIILSFLIMLMDGYDLAAMGFAAPAISAE------------------------------WGLDP-------VQL 54 (398)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhc------------------------------cCCCH-------HHH
Confidence 45667777777778888888888888888888888 77777 899
Q ss_pred hHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHHH
Q 009816 113 GELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVAV 192 (524)
Q Consensus 113 g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~ 192 (524)
+++.+.+.++..++.++.|+++||+|||+.+..+.++.+++.+++.++ ++++.+++.|++.|++.+...+...++
T Consensus 55 ~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~ 129 (398)
T TIGR00895 55 GFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALA-----TNVTQLLILRFLAGLGLGGLMPNLNAL 129 (398)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHc-----cchHHHHHHHHHHhcccccchhhHHHH
Confidence 999999999999999999999999999999999999999999998886 899999999999999999999999999
Q ss_pred HhhccccccccceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCcccccc
Q 009816 193 VGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNEEDES 271 (524)
Q Consensus 193 i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (524)
+.|++|+++|++++++...+..+|..+++.+++.+. ..|||+.|++.+++.++..++.+.++||+++....++.++...
T Consensus 130 ~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (398)
T TIGR00895 130 VSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRR 209 (398)
T ss_pred HHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHH
Confidence 999999999999999999999999999999998887 5799999999877777776777777887764322211111000
Q ss_pred C---CccccCCCcccccccchhhhhhhhhhHHHHhcC---CCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCh
Q 009816 272 L---SPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKI---PGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSS 345 (524)
Q Consensus 272 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 345 (524)
. ...+...+..+...+.+.+.+..+...+..+++ +..+.+.+..++..........++|.+.++ +|+++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~ 284 (398)
T TIGR00895 210 IVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLMVE-----LGFSL 284 (398)
T ss_pred HHHHHHHhccccccccccccccccchhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCCH
Confidence 0 000000000000000000000011111222222 223333444445555666677788865555 58999
Q ss_pred hhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHH
Q 009816 346 EMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITT 425 (524)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 425 (524)
.+.+.......++.+++.++.+++.||+++|+... ...+..+...++.. ...+.+......++.|++.+...+....
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 361 (398)
T TIGR00895 285 SLAATGGALFNFGGVIGSIIFGWLADRLGPRVTAL-LLLLGAVFAVLVGS--TLFSPTLLLLLGAIAGFFVNGGQSGLYA 361 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHH-HHHHHHHHHHHHHH--HhhCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999884433 33333333322222 1234455566777888888888888888
Q ss_pred HHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhh
Q 009816 426 AVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYI 469 (524)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l 469 (524)
...+.+| ++.++++.|+.+.+..+|..++|.+.|++
T Consensus 362 ~~~~~~~--------~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 362 LMALFYP--------TAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHhhcCC--------HHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 8888877 37789999999999999999999999875
No 51
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=100.00 E-value=2.9e-31 Score=262.58 Aligned_cols=349 Identities=15% Similarity=0.127 Sum_probs=256.5
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHh---ccccccchhHHHHHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYG---IGYWGNVHSFYYYLVV 174 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~---~a~~~~~~~~~~~~~~ 174 (524)
+|+++ .+.|++.+.+.+++.++++++|+++||+|||+++..+.++.+++.+++. .. .++++.+++.
T Consensus 43 ~g~s~-------~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~ 111 (402)
T TIGR00897 43 LGLSP-------QQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLG----HANYPLILLF 111 (402)
T ss_pred hCCCH-------HHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhcc----CccHHHHHHH
Confidence 77777 9999999999999999999999999999999999999999988876553 22 2578888999
Q ss_pred HHHHHHhhhcchhhHHHHHhhccccccccceehhhhhhhhhHH-HHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHH
Q 009816 175 QMLAGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSIGN-ITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFL 252 (524)
Q Consensus 175 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~-~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~ 252 (524)
|++.|++.+...+...+.+.+++|+++|++++|+.+.+.++|. +++|++++.+. .+||+..++.......+..++..+
T Consensus 112 ~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 191 (402)
T TIGR00897 112 YGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIALF 191 (402)
T ss_pred HHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHh
Confidence 9999999888888888889999999999999999999999997 57899988877 578776666544433333334444
Q ss_pred hcCCCCCCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Q 009816 253 FLPVNPESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFY 332 (524)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (524)
+.++.++.... + + + . +.++....++.++++|.++...+..++.....+...++.|.|
T Consensus 192 ~~~~~~~~~~~-~-~-----~--~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 248 (402)
T TIGR00897 192 SNKDIFTPQHM-Q-T-----R--E--------------KFSELGKAATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMF 248 (402)
T ss_pred ccCCCCCcccc-c-C-----C--c--------------chhhHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44443221100 0 0 0 0 000112235578899999888877777777788888999999
Q ss_pred HhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHH-HHHHHHHHHHHHHHHhh--cchhHHHHHHHH
Q 009816 333 VSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITA-ASFMYCAIPALFFYRSY--GHLSLALNIALM 409 (524)
Q Consensus 333 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 409 (524)
+++ +|+++.+.+.+.....++.++++++.|+++||++||+.+. ...+...+....+.... ...+.+...+..
T Consensus 249 ~~~-----~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~ 323 (402)
T TIGR00897 249 VAE-----LGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIA 323 (402)
T ss_pred HHH-----cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHH
Confidence 876 5999999999888899999999999999999999888653 22222322222222111 122344445566
Q ss_pred HHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-ChhHHHHHHHHHHHHH
Q 009816 410 FITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-SWTAVFTMLMAAALIS 488 (524)
Q Consensus 410 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~ 488 (524)
++.|++.+...+ ......+ .+ ++.+|++.|+.+....++..++|.+.|.+.|. |+...+++.+++.+++
T Consensus 324 ~~~G~~~~~~~~-~~~~~~~-~~--------~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~ 393 (402)
T TIGR00897 324 IALGIFLAGYVP-LAAVFPT-LA--------PKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVS 393 (402)
T ss_pred HHHHHHHHHHHH-HHHHHHh-hC--------cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHH
Confidence 667776655433 3333332 33 35689999999999999999999999999998 8889999888887776
Q ss_pred HHHHHHH
Q 009816 489 GLLLTRL 495 (524)
Q Consensus 489 ~~~~~~~ 495 (524)
.++..++
T Consensus 394 ~~~~~~~ 400 (402)
T TIGR00897 394 AFLTAFI 400 (402)
T ss_pred HHHHHHh
Confidence 6665543
No 52
>PRK03633 putative MFS family transporter protein; Provisional
Probab=100.00 E-value=1.6e-31 Score=262.77 Aligned_cols=356 Identities=15% Similarity=0.193 Sum_probs=264.1
Q ss_pred HHHHHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhhHhHHHHHH
Q 009816 40 LIVTFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTALLGELDLAF 119 (524)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~s~~ 119 (524)
+..++++.+..........+..|.+.++ +|+++ .++|++.+.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~------------------------------~~~s~-------~~~G~~~s~~ 50 (381)
T PRK03633 8 VLLLLCGLLLLTLAIAVLNTLVPLWLAQ------------------------------EHLPT-------WQVGVVSSSY 50 (381)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHH------------------------------cCCCH-------HHHHHHHHHH
Confidence 3444566666777778888888888888 78777 9999999999
Q ss_pred HHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHHHHhhcccc
Q 009816 120 LSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVAVVGNWFGK 199 (524)
Q Consensus 120 ~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 199 (524)
.+++.+++++.|+++||+|||+++..+.++.+++.++++++ ++++.+++.|+++|++.+...+...+.+.+..++
T Consensus 51 ~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~ 125 (381)
T PRK03633 51 FTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLM-----VGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTS 125 (381)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH
Confidence 99999999999999999999999999999999999999987 8999999999999999999889888888899999
Q ss_pred ccccceehhhhhhhhhHHHHHHHHHHHhhhcCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCccccccCCccccCC
Q 009816 200 SKRGLIMGIWNAHTSIGNITGSLVASALLTYGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNEEDESLSPKKIGE 279 (524)
Q Consensus 200 ~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (524)
++|++++++...+.++|..+||.+++.+....++..++..+.+.... +... +.+..++.. + + +
T Consensus 126 ~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~-~---~-~---------- 188 (381)
T PRK03633 126 RNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPWVTGLVLAAI-LPLL-FTRILNQQA-E---N-H---------- 188 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHH-HHHH-HhcccCCCC-C---C-C----------
Confidence 99999999999999999999999999887533232333323222221 1121 212111110 0 0 0
Q ss_pred CcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHH
Q 009816 280 GVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGG 359 (524)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 359 (524)
+..+.++.+++|.++......+...........++|.|+++ .|.++.+.+.+.+...++.
T Consensus 189 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-----~g~s~~~~g~~~~~~~~~~ 248 (381)
T PRK03633 189 ---------------DSTSIWPMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNH-----QGMSDASIGFWMALLVSAG 248 (381)
T ss_pred ---------------CCCCHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCCHHHHHHHHHHHHHHH
Confidence 00113456778877765444444444555667789999987 4899999999999999999
Q ss_pred HhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCC
Q 009816 360 VLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKG 439 (524)
Q Consensus 360 ~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (524)
+++++..|++.||+++|+.+..+.....++...+. . . ........+.|++.....+.......+..++
T Consensus 249 ~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~---~-~--~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~------ 316 (381)
T PRK03633 249 ILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML---S-Q--AAMAPALFILGAAGFTLYPVAMAWACEKVEH------ 316 (381)
T ss_pred HHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh---h-h--HHHHHHHHHHHHHHHhHHHHHHHHHHccCCH------
Confidence 99999999999999999988777666555443332 1 1 1222334445555555666666666666553
Q ss_pred CccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-ChhHHHHHHHHHHHHH
Q 009816 440 NSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-SWTAVFTMLMAAALIS 488 (524)
Q Consensus 440 ~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~ 488 (524)
+.++...+..+...++|..++|.+.|++.|. +++..|.+.+.+.++.
T Consensus 317 --~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~ 364 (381)
T PRK03633 317 --HELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIY 364 (381)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHH
Confidence 4456677777788899999999999999988 8888888777666544
No 53
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=100.00 E-value=4.1e-31 Score=262.97 Aligned_cols=335 Identities=18% Similarity=0.253 Sum_probs=252.8
Q ss_pred hHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHH
Q 009816 111 LLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVV 190 (524)
Q Consensus 111 ~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~ 190 (524)
..|++.+.+.++..++++++|+++||+|||++++.+.++.+++.+++.++ ++++.+++.|++.|++.+ ..+...
T Consensus 55 ~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~~~~-~~~~~~ 128 (408)
T PRK09874 55 WSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLA-----QNIWQFLILRALLGLLGG-FVPNAN 128 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHH-----hhHHHHHHHHHHHHHhhh-hHHhHH
Confidence 35899999999999999999999999999999999999999998888886 899999999999999865 567788
Q ss_pred HHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCcccc
Q 009816 191 AVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNEED 269 (524)
Q Consensus 191 ~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (524)
.++.+++|+++|++++++...+..+|..++|.+++.+. .++||+.|++.+++.++..+..++.+||.++...+++ .
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-- 205 (408)
T PRK09874 129 ALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIRENFQPVSKKE-M-- 205 (408)
T ss_pred HHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccCcccccchh-h--
Confidence 89999999999999999999999999999999999887 5799999999988877776666676766432111000 0
Q ss_pred ccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHH-HHHHHHHHHHHHHHHHHHHhhcccCCCCCCh---
Q 009816 270 ESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALC-LFFAKLVAYTFLYWLPFYVSHTAVDGKYLSS--- 345 (524)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--- 345 (524)
.+.....+.+++++++...+. .+...........+++.|..+. .+...
T Consensus 206 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 257 (408)
T PRK09874 206 ------------------------LHMREVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVREL----AGNVSNIA 257 (408)
T ss_pred ------------------------hHHHHHHHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----hccchHHH
Confidence 001122345677776553332 3333344445566778887775 22221
Q ss_pred hhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHH
Q 009816 346 EMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITT 425 (524)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 425 (524)
...+.+..+.+++.+++.+..|++.||+++|+.+..+.....+..+.... ..+.+...+..++.|++.+...+...+
T Consensus 258 ~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~ 334 (408)
T PRK09874 258 FISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSF---VQTPLQLGILRFLLGAADGALLPAVQT 334 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHH---hccHHHHHHHHHHHHhhhHhhHHHHHH
Confidence 12455666677888889999999999999999887776665544443322 134455555666778887777777776
Q ss_pred HHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-ChhHHHHHHHHHHHHHHHHHH
Q 009816 426 AVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-SWTAVFTMLMAAALISGLLLT 493 (524)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~ 493 (524)
...+..+ ++.+|+..++.+....+|..+||.+.|++.+. +|+..|++.+++.+++.++..
T Consensus 335 ~~~~~~~--------~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~ 395 (408)
T PRK09874 335 LLVYNSS--------NQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSW 395 (408)
T ss_pred HHHHhCC--------cccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHH
Confidence 6666554 36678999999999999999999999999887 999999999888777665554
No 54
>PRK12382 putative transporter; Provisional
Probab=100.00 E-value=4.5e-31 Score=260.93 Aligned_cols=336 Identities=15% Similarity=0.114 Sum_probs=243.1
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHh---ccccccchhHHHHHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYG---IGYWGNVHSFYYYLVV 174 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~---~a~~~~~~~~~~~~~~ 174 (524)
+|+++ .+.|++.+++.+++.++++++|+++||+|||++++.+.++..++.+... .......++++.+++.
T Consensus 46 lg~s~-------~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 118 (392)
T PRK12382 46 LGFGN-------TMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVG 118 (392)
T ss_pred cCCcH-------HHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHH
Confidence 78877 9999999999999999999999999999999999999887776654332 2100112588999999
Q ss_pred HHHHHHhhhcchhhHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHHh
Q 009816 175 QMLAGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFLF 253 (524)
Q Consensus 175 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~ 253 (524)
|+++|++.+...+...+++.|++|+++|++++++.+.+..+|..++|++++.+. .+|||+.+.+..++.++. +.+
T Consensus 119 r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~----~~~ 194 (392)
T PRK12382 119 RLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLA----WAF 194 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHH----HHH
Confidence 999999999888999999999999999999999999999999999999999887 579998777654433322 222
Q ss_pred cCCCCCCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009816 254 LPVNPESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYV 333 (524)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (524)
.++.|+.+.+++ . + . +.++.++ .++...+..++..........+.|.|+
T Consensus 195 ~~~~~~~~~~~~-------~---~-----~--------------~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~ 243 (392)
T PRK12382 195 NGTVRKVPAHAG-------E---R-----P--------------SLWSVVG--LIWKPGLGLALQGVGFAVIGTFVSLYF 243 (392)
T ss_pred HHhccCCCCCcc-------c---C-----c--------------hHHHHHH--HHHHhHHHHHHHHHHHhHHHHHHHHHH
Confidence 222221110000 0 0 0 0001111 111111222233344455667788888
Q ss_pred hhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 009816 334 SHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITG 413 (524)
Q Consensus 334 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 413 (524)
++. +++ +.+.......++.++++++.|++.||+++|+.+..+..+..+..+.+.. .++.+..++..++.|
T Consensus 244 ~~~-----~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~g 313 (392)
T PRK12382 244 ASK-----GWA--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWL---APTAWVALAGAALTG 313 (392)
T ss_pred Hhc-----CCc--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHH---cccHHHHHHHHHHHH
Confidence 764 554 3456666777888899999999999999999887777666665544432 234445555667778
Q ss_pred hhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-ChhHHHHHHHHHHHHHHHHH
Q 009816 414 MFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-SWTAVFTMLMAAALISGLLL 492 (524)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~ 492 (524)
++.+...+.......+..+ ++.+|++.|+.+....+|..++|.+.|++.|. +|+..|.+.+++.+++.++.
T Consensus 314 ~~~~~~~~~~~~~~~~~~~--------~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 385 (392)
T PRK12382 314 AGCSLIFPALGVEVVKRVP--------SQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVT 385 (392)
T ss_pred HHHHhHHHHHHHHHHHhcC--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 7777777766667777665 47789999999999999999999999999998 99999999888777666554
Q ss_pred H
Q 009816 493 T 493 (524)
Q Consensus 493 ~ 493 (524)
.
T Consensus 386 ~ 386 (392)
T PRK12382 386 I 386 (392)
T ss_pred H
Confidence 4
No 55
>PRK11043 putative transporter; Provisional
Probab=100.00 E-value=6.8e-31 Score=260.47 Aligned_cols=319 Identities=15% Similarity=0.104 Sum_probs=246.2
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQML 177 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l 177 (524)
+|+++ ++.+++.+++.+++.++++++|+++||+|||+++..+.++.+++.+++.++ ++++.+++.|++
T Consensus 36 ~~~s~-------~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~~l 103 (401)
T PRK11043 36 LQTSA-------SAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWV-----ESAAQLLVLRFV 103 (401)
T ss_pred HCCCH-------HHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHh-----cCHHHHHHHHHH
Confidence 78777 999999999999999999999999999999999999999999999999886 899999999999
Q ss_pred HHHhhhcchhhHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHHhcCC
Q 009816 178 AGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFLFLPV 256 (524)
Q Consensus 178 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~ 256 (524)
+|++.+...+...+++.|++|++++++..+.......+|..++|.+++.+. ++|||+.|++.+++.++..++.+ .+++
T Consensus 104 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~ 182 (401)
T PRK11043 104 QAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTL-RLKP 182 (401)
T ss_pred HHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHH-HcCC
Confidence 999988888888899999999999999999998889999999999999887 57999999998887777655443 4444
Q ss_pred CCCCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 009816 257 NPESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHT 336 (524)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (524)
++++++ + ++++.++++.+++|+++...+...+..........+.|.++++
T Consensus 183 ~~~~~~----~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~- 232 (401)
T PRK11043 183 SKKARK----Q-------------------------SQDALTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQ- 232 (401)
T ss_pred CCCccc----c-------------------------chHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHH-
Confidence 322110 0 0012345677888887766555555555566677788988876
Q ss_pred ccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHH--hhcchhHHHHHHHHHHHHh
Q 009816 337 AVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYR--SYGHLSLALNIALMFITGM 414 (524)
Q Consensus 337 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~ 414 (524)
+|+++.+.++......++.++++++.+++.||+++|+.........+++...+.. .....+.+..+....+.++
T Consensus 233 ----~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (401)
T PRK11043 233 ----MGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAA 308 (401)
T ss_pred ----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHH
Confidence 5899999999888888889999999999999999888765554444333322211 1112233334444556677
Q ss_pred hhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc
Q 009816 415 FVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT 472 (524)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 472 (524)
+.+..++.......+..| +.+|++.|+.+..+..++..++.+.|.+.+.
T Consensus 309 ~~~~~~~~~~~~~~~~~~---------~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~ 357 (401)
T PRK11043 309 ANGAIYPIVVAQALRPFP---------QATGKAAALQNTLQLGLCFLASLLVSALIST 357 (401)
T ss_pred HHHHHHHHHHHHHhhhCc---------ccChHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 777777666555554443 4579999999999999999999999988876
No 56
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.3e-33 Score=262.81 Aligned_cols=376 Identities=19% Similarity=0.267 Sum_probs=278.0
Q ss_pred ccccchhhHHHHHHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchh
Q 009816 31 SFKNHQAIVLIVTFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTA 110 (524)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 110 (524)
...+..++.+.++++..+++++|++.+.-+.+.+++. +|+++ +
T Consensus 26 ~~~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~------------------------------fni~~-------s 68 (493)
T KOG1330|consen 26 LSMKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTY------------------------------FNISD-------S 68 (493)
T ss_pred cccccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHh------------------------------cCCCc-------h
Confidence 4456677888999999999999999999998888888 78777 8
Q ss_pred hHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHH
Q 009816 111 LLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVV 190 (524)
Q Consensus 111 ~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~ 190 (524)
..|++.+.+.+.+.+++|++|+++|||.||+++.+|..+++++.++++++ ..||++.++|.+.|+|.+...|+++
T Consensus 69 ~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs-----~~Fwq~~l~R~~vGiGeAs~~~ia~ 143 (493)
T KOG1330|consen 69 ELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFS-----NHFWQVLLCRGFVGIGEASYSPIAP 143 (493)
T ss_pred hccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHH-----HHHHHHHHHHHHhccchhhhcccch
Confidence 89999999999999999999999999999999999999999999999997 9999999999999999999999999
Q ss_pred HHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhhh--cCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCccc
Q 009816 191 AVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALLT--YGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNEE 268 (524)
Q Consensus 191 ~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~--~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (524)
++++|.+|.++|++++++++.+..+|..+|.+.+..+.+ ..|||.|++.++++++++++.+++.+|+++....+...+
T Consensus 144 s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~ 223 (493)
T KOG1330|consen 144 SLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVDGE 223 (493)
T ss_pred hHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCcccccccccccC
Confidence 999999999999999999999999999999999998883 359999999999999999999999888655321111110
Q ss_pred cccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhh
Q 009816 269 DESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMA 348 (524)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 348 (524)
.+. .++.....++.+...++|.+....+......+...++..|.|.+.....+- .|++....
T Consensus 224 ~~~-----------------~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~-~~~~~~~~ 285 (493)
T KOG1330|consen 224 NKM-----------------VKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYEL-IGFDHNAT 285 (493)
T ss_pred CcC-----------------CCCccchHHHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHH-hCCccccc
Confidence 000 011112344556667778777777777766666666667777665543110 35666666
Q ss_pred hhHHHHHHHHHHhhhHHHHHHHhhhhhh----HHHHH------HHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhh
Q 009816 349 GNLSTLFDVGGVLGGILAGHISDRLDAR----AITAA------SFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNG 418 (524)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~g~l~dr~~~~----~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 418 (524)
.++..+...++.+|.+++|.++||+.++ ..... ......+..+.+....+. ........++++|.....
T Consensus 286 ~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~-~s~~~~~il~~~g~~~~~ 364 (493)
T KOG1330|consen 286 LIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTS-SSMIFGLILFLVGETISW 364 (493)
T ss_pred hhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHh
Confidence 6777788889999999999999996432 11111 111122222222222222 223334444445544333
Q ss_pred -hhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhh-hhhhhhhhhhHhhccc--Chh
Q 009816 419 -PYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGS-VGAAIGPLLTGYISAT--SWT 475 (524)
Q Consensus 419 -~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~-~g~~i~~~~~g~l~~~--~~~ 475 (524)
.++.......+.+| ++.|.++.++...+.. +|.+-+|++.|.+.|. +|+
T Consensus 365 ~~~a~n~~i~l~vV~--------p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l~g~~ 417 (493)
T KOG1330|consen 365 FNWATNNPIFLEVVP--------PSRRTTAYALDTVFEHIFGDAASPYIVGILSDKLRGYK 417 (493)
T ss_pred cccccccceeeEecC--------cccccHHHHHHHHHHHHhccCCCcceehhHHHHhhCCC
Confidence 23344455556666 4667888888777764 4555566699999987 555
No 57
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=100.00 E-value=8.4e-31 Score=259.17 Aligned_cols=354 Identities=15% Similarity=0.122 Sum_probs=265.7
Q ss_pred hhhHHHHHHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhhHhHH
Q 009816 36 QAIVLIVTFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTALLGEL 115 (524)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~ 115 (524)
.++.+....+......+....+.+..|.+.++ +|+++ .+.+++
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~------------------------------~~~s~-------~~~~~~ 48 (394)
T PRK11652 6 NVNLLFMLVLLVAVGQMAQTIYVPAIADMARD------------------------------LNVRE-------GAVQAV 48 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccHHHHHHH------------------------------hCCCH-------HHHHHH
Confidence 34444444444445555666666677777777 78777 999999
Q ss_pred HHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHHHHhh
Q 009816 116 DLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVAVVGN 195 (524)
Q Consensus 116 ~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~ 195 (524)
.+.+.+++.++++++|+++||+|||+++..+.++.+++.+++.++ ++++.+++.|++.|++.+...+....++.|
T Consensus 49 ~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~ 123 (394)
T PRK11652 49 MAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFA-----HSLTVLIAASAIQGLGTGVGGVMARTLPRD 123 (394)
T ss_pred HHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHH-----ccHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998886 899999999999999998888888889999
Q ss_pred ccccccccceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCccccccCCc
Q 009816 196 WFGKSKRGLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNEEDESLSP 274 (524)
Q Consensus 196 ~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (524)
.+++++++++.++...+..+|..++|.+++.+. ..|||+.|++.+++.++..++..++.||+++.++++
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 193 (394)
T PRK11652 124 LYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRPADARR---------- 193 (394)
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCccccch----------
Confidence 999999999999999999999999999999887 469999999988877766666666677653321100
Q ss_pred cccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHH
Q 009816 275 KKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTL 354 (524)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 354 (524)
++....++..+++|.++...+..+........+....+.++++. +|+++.+.++....
T Consensus 194 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~ 251 (394)
T PRK11652 194 ------------------TRVLASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAV----LGLSSMTVSILFIL 251 (394)
T ss_pred ------------------hHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHH----cCCCHHHHHHHHHH
Confidence 00123456678888877666655555555555566778888886 79999999998888
Q ss_pred HHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhccc
Q 009816 355 FDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTH 434 (524)
Q Consensus 355 ~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 434 (524)
..++.+++.++.+++.||.+++........................+.+.......+.+++.+...+.......+..|
T Consensus 252 ~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-- 329 (394)
T PRK11652 252 PIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFP-- 329 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc--
Confidence 888888999999999999874333322222222111111111112233445555666777777777777777766654
Q ss_pred ccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc
Q 009816 435 SSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT 472 (524)
Q Consensus 435 ~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 472 (524)
+.+|++.++.+....+|+.+++.+.+.+.+.
T Consensus 330 -------~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~ 360 (394)
T PRK11652 330 -------YLAGTAGALLGGLQNIGSGLAALLSAMLPQT 360 (394)
T ss_pred -------ccchHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 4568999999999999999999999988765
No 58
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=100.00 E-value=9.4e-31 Score=258.15 Aligned_cols=335 Identities=17% Similarity=0.143 Sum_probs=251.5
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQML 177 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l 177 (524)
+|++. .+.|++.+.+.++..+.++++|+++||+|||++++.+.++.+++.+++.++ ++++.+++.|++
T Consensus 41 ~g~s~-------~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~~~l 108 (400)
T PRK11646 41 LGWAA-------VMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIA-----HEPWLLWLSCIL 108 (400)
T ss_pred hCCcH-------HHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHh-----ccHHHHHHHHHH
Confidence 78777 999999999999999999999999999999999999999999999999886 899999999999
Q ss_pred HHHhhhcchhhHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhhhcCchhHHHHhHHHHHHHHHHHHHhcCCC
Q 009816 178 AGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALLTYGWGWSFVVPGLIIAFVGLIVFLFLPVN 257 (524)
Q Consensus 178 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~ 257 (524)
+|++.+...|...+++.|++|+++|++++++.....++|..+||.+++.+.++|||+.|++.+++.++..++..++.||.
T Consensus 109 ~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~~g~~~~f~~~~~~~~~~~i~~~~~~~~~ 188 (400)
T PRK11646 109 SGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQYDFRLVCATGAVLFVLAAAFNAWLLPAY 188 (400)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 99999988999999999999999999999999999999999999999999888999999998887776655555555542
Q ss_pred CCCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 009816 258 PESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTA 337 (524)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (524)
++.. . + ++...++++.+++|+++...+..+...........++|.|+++.
T Consensus 189 ~~~~---~-~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~- 238 (400)
T PRK11646 189 KLST---V-R-------------------------TPVREGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDI- 238 (400)
T ss_pred cccc---c-c-------------------------hhhHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhh-
Confidence 1100 0 0 00112355678888877665554444444444567889998886
Q ss_pred cCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhh
Q 009816 338 VDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDR-LDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFV 416 (524)
Q Consensus 338 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 416 (524)
+.++.+.+.+.+..+++...+....+++.|| .+.++.+..+..+..++...+.. .++.+...+...+.+.+.
T Consensus 239 ----~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~l~~~g~ 311 (400)
T PRK11646 239 ----AGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGM---VSNLQQLFTLICLFYIGS 311 (400)
T ss_pred ----cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHH---hhhHHHHHHHHHHHHHHH
Confidence 4467788888888777776666555666654 55555555555555544433322 233344444455566666
Q ss_pred hhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhcccC-----hhHHHHHHHHHHHHHH
Q 009816 417 NGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISATS-----WTAVFTMLMAAALISG 489 (524)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~-----~~~~~~~~~~~~~~~~ 489 (524)
+...+...+...+..| ++.+|++.|+.+....+|..+||.+.|++.|.+ ....++..+++.+++.
T Consensus 312 ~~~~p~~~~~~~~~~p--------~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (400)
T PRK11646 312 IIAEPARETLSASLAD--------ARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITL 381 (400)
T ss_pred HHHHccHHHHHHhcCC--------cccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHH
Confidence 6666666677777776 367799999999999999999999999999872 3445555444444443
No 59
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.3e-31 Score=261.25 Aligned_cols=406 Identities=21% Similarity=0.262 Sum_probs=317.2
Q ss_pred cccchhhHHHHHHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhh
Q 009816 32 FKNHQAIVLIVTFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTAL 111 (524)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 111 (524)
...+.|.+.+..+++.+..+.....++++.+.++++ ++-+. .+
T Consensus 40 dGG~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~------------------------------f~~s~-------~~ 82 (509)
T KOG2504|consen 40 DGGWGWVVVFASFLVNLSTDGLINSFGLLFEELMDY------------------------------FGSSS-------SQ 82 (509)
T ss_pred CCCeeeeeeHhHHHHHHhhhcchheehhhHHHHHHH------------------------------hCCCc-------cH
Confidence 678999999999999999999999999988888888 66565 78
Q ss_pred HhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHH-HHHHHHhhhcchhhHH
Q 009816 112 LGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVV-QMLAGLFQSTGWPSVV 190 (524)
Q Consensus 112 ~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~-r~l~G~~~~~~~~~~~ 190 (524)
++|+.++..-.+.+.+|+.+.+.||+|.|.+.+.|.++.+++.++.+++ +++|++++. -++.|+|.++.+.+..
T Consensus 83 ~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~-----~~i~~l~lt~gvi~G~G~~~~~~pai 157 (509)
T KOG2504|consen 83 IAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFA-----TSLWQLYLTFGVIGGLGLGLIYLPAV 157 (509)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHH-----hhHHHHHHHHHHHhhccchhhhcchh
Confidence 9999999999999999999999999999999999999999999999998 888887765 5678999999999999
Q ss_pred HHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCcccc
Q 009816 191 AVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNEED 269 (524)
Q Consensus 191 ~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (524)
.++..|| +++|+.+.|+...+.++|.++-|.+...+. .+|||+.+++.+.+.+-..+......|..++..+...++.+
T Consensus 158 viv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~ 236 (509)
T KOG2504|consen 158 VILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLR 236 (509)
T ss_pred hhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhc
Confidence 9999999 578999999999999999999888887777 68999999999998877766666666644333221000000
Q ss_pred c--------------cCCccccCCC----cccccccc-hhhh---hhhhhhH---HHHhcCCCcHHHHHHHHHHHHHHHH
Q 009816 270 E--------------SLSPKKIGEG----VTQPLLRR-ETKI---EEKAVGF---IEAWKIPGVAPFALCLFFAKLVAYT 324 (524)
Q Consensus 270 ~--------------~~~~~~~~~~----~~~~~~~~-~~~~---~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (524)
. ....+..... ......++ +.+. ..+.... .+++++|.++.+.+...+....+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~ 316 (509)
T KOG2504|consen 237 NSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNV 316 (509)
T ss_pred cccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHH
Confidence 0 0000000000 00000000 0000 1111122 5789999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHH--HHHHHHHHHHHHHHHHhhcchhH
Q 009816 325 FLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAIT--AASFMYCAIPALFFYRSYGHLSL 402 (524)
Q Consensus 325 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 402 (524)
...++|.|..+ ++++..+++.+.++.++..++++++.|+++|+...++.. .++.+..++..+.+. ...+.
T Consensus 317 p~~~l~~~~~~-----~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p---~~~~~ 388 (509)
T KOG2504|consen 317 PFVYLPSYAKS-----LGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLP---FATTY 388 (509)
T ss_pred HHHHHHHHHhh-----cCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHH---HhccH
Confidence 99999999996 599999999999999999999999999999998744433 333333333332222 24566
Q ss_pred HHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc--ChhHHHHH
Q 009816 403 ALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT--SWTAVFTM 480 (524)
Q Consensus 403 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~--~~~~~~~~ 480 (524)
+..+....++|++.+.........+.+.++. +....+.|+...+..++..+||++.|++.|. +|...|+.
T Consensus 389 ~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~--------~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~ 460 (509)
T KOG2504|consen 389 VGLIVFSILFGFCVGSFSSLTPVILVDLVGL--------EKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYF 460 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCh--------hhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhh
Confidence 7778888889999888888777788888874 5668899999999999999999999999998 69999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 009816 481 LMAAALISGLLLTRLV 496 (524)
Q Consensus 481 ~~~~~~~~~~~~~~~~ 496 (524)
+++..+++....+...
T Consensus 461 ~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 461 CGLCFLLSAVLLLILR 476 (509)
T ss_pred cChHHHHHHHHHHHhH
Confidence 9999888876666544
No 60
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=100.00 E-value=1.9e-30 Score=255.40 Aligned_cols=321 Identities=16% Similarity=0.168 Sum_probs=239.9
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQML 177 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l 177 (524)
+|+++ .+.+++.+++.++..++.+++|+++||+|||+++..+.++.+++.+++.++ ++++.+++.|++
T Consensus 21 ~~~s~-------~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~-----~~~~~~~~~~~l 88 (377)
T PRK11102 21 FGVSA-------GSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALA-----QTIDQLIYMRFL 88 (377)
T ss_pred hCCCH-------HHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHH-----ccHHHHHHHHHH
Confidence 77777 999999999999999999999999999999999999999999999999986 899999999999
Q ss_pred HHHhhhcchhhHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHHhcCC
Q 009816 178 AGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFLFLPV 256 (524)
Q Consensus 178 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~ 256 (524)
.|++.+...+...+++.|++|+++|++++++.+....+|..++|.+++.+. ..+||+.|++.+++.++..++..+.+||
T Consensus 89 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (377)
T PRK11102 89 HGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPE 168 (377)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 999999999999999999999999999999999999999999999999887 5799999999888887776666677776
Q ss_pred CCCCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 009816 257 NPESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHT 336 (524)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (524)
+++++++++. +.++....+++.+++|.++...+..++..........+.|.++.+.
T Consensus 169 ~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (377)
T PRK11102 169 TLPKERRQPF------------------------HLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIEL 224 (377)
T ss_pred cCcccccCCC------------------------ChHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 5332110000 0001123455678888887776666666666666667778787776
Q ss_pred ccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHHHhh
Q 009816 337 AVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSY-GHLSLALNIALMFITGMF 415 (524)
Q Consensus 337 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~ 415 (524)
+|+++.+.+.+.....++.++++++.+++.||+++|+.+..+.....+..+.+.... ...+.+...+...+.+.+
T Consensus 225 ----~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (377)
T PRK11102 225 ----NGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGC 300 (377)
T ss_pred ----hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 799999999999999999999999999999999999988877765444333222211 112223333333333333
Q ss_pred hhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhh-hhhhhhhhhhhH
Q 009816 416 VNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTG-SVGAAIGPLLTG 467 (524)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~-~~g~~i~~~~~g 467 (524)
.+...........+.. ++.++++.++.+... .+|..+++.+.+
T Consensus 301 ~~~~~~~~~~~~~~~~---------~~~~g~~~~~~~~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 301 VSMISSNAMAVILDEF---------PHMAGTASSLAGTLRFGIGAIVGALLSL 344 (377)
T ss_pred HHHhhHHHHHHHhccc---------cccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333333333333332 255688888877654 456666666544
No 61
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=100.00 E-value=3.7e-30 Score=254.41 Aligned_cols=255 Identities=14% Similarity=0.108 Sum_probs=207.8
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQML 177 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l 177 (524)
+|.++ .+.+++.+.+.++..+++++.|+++||+|||+.++.+.++.+++.+++..+ ++++.+++.|++
T Consensus 33 ~~~s~-------~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~-----~~~~~~~~~~~l 100 (392)
T PRK10473 33 LNASE-------AQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLA-----ETSSLFLAGRFL 100 (392)
T ss_pred hCCCH-------HHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHh-----CcHHHHHHHHHH
Confidence 77776 899999999999999999999999999999999999999999999999886 889999999999
Q ss_pred HHHhhhcchhhHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHHhcCC
Q 009816 178 AGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFLFLPV 256 (524)
Q Consensus 178 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~ 256 (524)
+|++.+...+...+++.|++|+++|++++++.+....+|..++|.+++.+. ..+||+.|++.+++.++..++..+.+||
T Consensus 101 ~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 180 (392)
T PRK10473 101 QGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKE 180 (392)
T ss_pred HHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999989999999999999999999999999999999999999998876 5799999999988888777777777776
Q ss_pred CCCCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 009816 257 NPESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHT 336 (524)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (524)
++++...+ + . +.....++.+++++++...+...+..........+.|.++++.
T Consensus 181 ~~~~~~~~--~-----~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (392)
T PRK10473 181 TRPARAPA--A-----S--------------------SKPRENSESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQ 233 (392)
T ss_pred CCCcccCC--c-----c--------------------chHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 54321000 0 0 0011224556777766655554444444445566677787776
Q ss_pred ccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHH
Q 009816 337 AVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYR 395 (524)
Q Consensus 337 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~ 395 (524)
+|+++.+.+......+++.+++.++.+++.||+++|+.+..+..+..++.+.+..
T Consensus 234 ----~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~ 288 (392)
T PRK10473 234 ----MGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLAL 288 (392)
T ss_pred ----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 7999999999999999999999999999999999999888877766665555443
No 62
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=100.00 E-value=5.9e-31 Score=257.92 Aligned_cols=348 Identities=19% Similarity=0.235 Sum_probs=257.2
Q ss_pred HHHHHHHHHHHhhcccccccccc-cCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhhHhHHHHHH
Q 009816 41 IVTFFAYTSYHAARKTTSIVKST-LDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTALLGELDLAF 119 (524)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~s~~ 119 (524)
...++++++.+.....+++..|. ++++ +|+++ .+.+++.+.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------~~~s~-------~~~~~~~~~~ 46 (366)
T TIGR00886 4 FFSWFGFFLSFSVWFAFSPLAVQMIKDD------------------------------LGLST-------AQLGNLVAVP 46 (366)
T ss_pred HHHHHHHHHHHHHHHHhHHhhhHHHHHH------------------------------hCCCH-------HHhhHhhHHH
Confidence 34667777788888889999995 8788 88887 9999999999
Q ss_pred HHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccch-hHHHHHHHHHHHHHhhhcchhhHHHHHhhccc
Q 009816 120 LSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVH-SFYYYLVVQMLAGLFQSTGWPSVVAVVGNWFG 198 (524)
Q Consensus 120 ~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~-~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~ 198 (524)
.+++.++++++|+++||+|||+.++++.++.+++.++++++ + +++.+++.|+++|++.+. .+...+++.|++|
T Consensus 47 ~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~-----~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~ 120 (366)
T TIGR00886 47 VLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLA-----VQSYSVLLLLRLFIGIAGGS-FASCMPWISFFFP 120 (366)
T ss_pred HHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH-----hhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcC
Confidence 99999999999999999999999999999999999999987 7 999999999999998654 5667899999999
Q ss_pred cccccceehhhhhhhhhHHHHHHHHHHHhhh-----------cCchhHH-HHhHHHHHHHHHHHHHhcCCCCCCCCCCCc
Q 009816 199 KSKRGLIMGIWNAHTSIGNITGSLVASALLT-----------YGWGWSF-VVPGLIIAFVGLIVFLFLPVNPESVGTDTN 266 (524)
Q Consensus 199 ~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~-----------~gwr~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (524)
+++|++++++.....++|..+++.+++.+.. .+||+.| +..+++..+..++.+...+|.|+...++++
T Consensus 121 ~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (366)
T TIGR00886 121 KKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFFVGADTPPGKPATGK 200 (366)
T ss_pred HhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHHHHHHHhcccCCcccccchh
Confidence 9999999999998888888888777765542 3899999 444666655555566666665543211110
Q ss_pred cccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChh
Q 009816 267 EEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSE 346 (524)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 346 (524)
. + .. +.... . .++.....++.+++|+++...+..++..........+.|.|+++. +|+++.
T Consensus 201 ~--~-~~--~~~~~-----~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~g~~~~ 261 (366)
T TIGR00886 201 L--S-FK--GARWS-----V-----GTGALGDQLKVFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQ----FGLSKV 261 (366)
T ss_pred c--c-cc--ccccc-----c-----cchhHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH----cCCcHH
Confidence 0 0 00 00000 0 001112346678889988888777777777778889999999887 799999
Q ss_pred hhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcch-hHHHHHHHHHHHHhhhhhhhHHHHH
Q 009816 347 MAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHL-SLALNIALMFITGMFVNGPYALITT 425 (524)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~ 425 (524)
+++.+.....+..++++++.|++.||+++|+.+..+......+..++....... +.+.......+.+++.+...+....
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 341 (366)
T TIGR00886 262 TAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGSTFA 341 (366)
T ss_pred HHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhccccchhhh
Confidence 999998999999999999999999999998877666655555444443322211 3444344444444555555555555
Q ss_pred HHHhhhcccccCCCCccchhHHHHHHHhhhhhhh
Q 009816 426 AVSADLGTHSSLKGNSRALATVTAIIDGTGSVGA 459 (524)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 459 (524)
...+..+ +.+|++.|+.+...++|+
T Consensus 342 ~~~~~~~---------~~~g~~~g~~~~~~~~g~ 366 (366)
T TIGR00886 342 LVPHIFR---------RATGAVSGLVGAIGNLGG 366 (366)
T ss_pred cchhhch---------hhcccHHHHHHHhccCCC
Confidence 5555443 567999999988877763
No 63
>PRK11010 ampG muropeptide transporter; Validated
Probab=100.00 E-value=7.8e-30 Score=257.29 Aligned_cols=345 Identities=13% Similarity=0.077 Sum_probs=247.5
Q ss_pred hhHhHHHHHHHHHHHhhhhhhhcccccC-----Cchhh-HHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhh
Q 009816 110 ALLGELDLAFLSIYAGGMFFSGHLGDRL-----DLRIF-LTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQS 183 (524)
Q Consensus 110 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-----Grr~~-l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~ 183 (524)
.++|.+ +.....+ ++.+++|+++||+ |||+. ++.+.+..+++..++++. .+.++++.+.+.+++.|++.+
T Consensus 47 ~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~--~~~~~l~~l~~~~~l~~~~~a 122 (491)
T PRK11010 47 KTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFL--EPGTQLRWLAALAVVIAFCSA 122 (491)
T ss_pred HHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHc--CCcchHHHHHHHHHHHHHHHH
Confidence 778875 4444444 5899999999999 99885 667777777777777664 123578899999999999999
Q ss_pred cchhhHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhhh--cCchhHHHHhHHHHHHHHHHHHHhcCCCCCCC
Q 009816 184 TGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALLT--YGWGWSFVVPGLIIAFVGLIVFLFLPVNPESV 261 (524)
Q Consensus 184 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~--~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (524)
...+...+++.|++|+++|+++.++...+..+|.++++.++..+.+ .|||..|++.+++.++..+ ..++.||+++..
T Consensus 123 ~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l-~~~~~~e~~~~~ 201 (491)
T PRK11010 123 SQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCII-ATLLAPEPTDTI 201 (491)
T ss_pred HHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHH-HHHhcCCCcccc
Confidence 9999999999999999999999999999999999999999988885 4999999999887766644 334466643211
Q ss_pred CCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCC
Q 009816 262 GTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGK 341 (524)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (524)
+ + + +. . .++...++++.++++..+...+..++..........+.+.|+.+. +
T Consensus 202 ~--~-~-~~------~--------------~~~~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~----~ 253 (491)
T PRK11010 202 P--V-P-KT------L--------------EQAVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRG----V 253 (491)
T ss_pred c--c-c-cc------h--------------hhhHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----c
Confidence 0 0 0 00 0 000122355677778777766666666666666677888887765 7
Q ss_pred CCChhhhhhHHH-HHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHH-hhcchhHHHHHHHHHHHHhhhhhh
Q 009816 342 YLSSEMAGNLST-LFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYR-SYGHLSLALNIALMFITGMFVNGP 419 (524)
Q Consensus 342 g~~~~~~~~~~~-~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~ 419 (524)
|++..+.+.+.. ...++.+++.++.|++.||+++|+.+..+..+.++..+.+.. .....+.+......++..++.+..
T Consensus 254 G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~ 333 (491)
T PRK11010 254 GFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMG 333 (491)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHH
Confidence 999999999874 556799999999999999999988776655544443322221 111123333333334433333334
Q ss_pred hHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-ChhHHHHHHHHHHHHHHHHHHHH
Q 009816 420 YALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-SWTAVFTMLMAAALISGLLLTRL 495 (524)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~ 495 (524)
.+...+...+..+ ++..++..|+.+....+|..+++.+.|++.|. ||+..|.+.+++.+.+.+.....
T Consensus 334 ~~~~~a~~~~l~~--------~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 334 TAAFVALLMTLCN--------KSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHHHHHcC--------CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 4444555555555 35568899999999999999999999999998 99998888888877766655543
No 64
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.98 E-value=2e-30 Score=256.77 Aligned_cols=323 Identities=19% Similarity=0.211 Sum_probs=237.0
Q ss_pred HHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHH--------HHHHHHHHHHHhhhcchhhHHH
Q 009816 120 LSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFY--------YYLVVQMLAGLFQSTGWPSVVA 191 (524)
Q Consensus 120 ~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~--------~~~~~r~l~G~~~~~~~~~~~~ 191 (524)
.++..+++++.|+++||+|||++++++.++.+++.++++++ +++. .+++.|+++|++.+...+...+
T Consensus 45 ~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~ 119 (394)
T TIGR00883 45 FLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLL-----PSYATIGIWAPILLLLARLIQGFSLGGEWGGAAL 119 (394)
T ss_pred HHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhC-----CChhhhHHHHHHHHHHHHHHHHhhccccccccHH
Confidence 33445789999999999999999999999999999999986 6654 5889999999999999999999
Q ss_pred HHhhccccccccceehhhhhhhhhHHHHHHHHHHHhh---------hcCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCC
Q 009816 192 VVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL---------TYGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVG 262 (524)
Q Consensus 192 ~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~---------~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (524)
++.|++|+++|++..++...+..+|.++++.++..+. .++||+.|++.+++.++. .......||+++...
T Consensus 120 ~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 198 (394)
T TIGR00883 120 YLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIG-LYLRRNLEETPVFEK 198 (394)
T ss_pred HhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHH-HHHHHhcCCChhHHH
Confidence 9999999999999999999999999999998876653 368999999876655443 334445555443211
Q ss_pred CCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCC--cHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCC
Q 009816 263 TDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPG--VAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDG 340 (524)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (524)
.++++ ++...+.++.+++++ ++......++..........++|.|+++.
T Consensus 199 ~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 249 (394)
T TIGR00883 199 AQEKH-------------------------KKKRGPIRETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQT---- 249 (394)
T ss_pred HHhcc-------------------------ccccCCHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----
Confidence 10000 001112344555555 55666666666667777788999999776
Q ss_pred CCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHH-HHHHHhhcchhHHHHHHHHHHHHhhhhhh
Q 009816 341 KYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPA-LFFYRSYGHLSLALNIALMFITGMFVNGP 419 (524)
Q Consensus 341 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 419 (524)
+|.++.+.+.......++.+++.++.|++.||++||+.+.....+..+.. ..........+.+......++.+++.+..
T Consensus 250 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 329 (394)
T TIGR00883 250 LGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMY 329 (394)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999997765544443332 22221112234455555666777777777
Q ss_pred hHHHHHHHHhhhcccccCCCCccchhHHHHHH-HhhhhhhhhhhhhhhHhhccc-C-hhHHHHHHHHHH
Q 009816 420 YALITTAVSADLGTHSSLKGNSRALATVTAII-DGTGSVGAAIGPLLTGYISAT-S-WTAVFTMLMAAA 485 (524)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~-~~~~~~g~~i~~~~~g~l~~~-~-~~~~~~~~~~~~ 485 (524)
.+.....+.+.+|+ +.|+++.++. +....+|..++|.+.|++.|. + +...++...++.
T Consensus 330 ~~~~~~~~~~~~p~--------~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~ 390 (394)
T TIGR00883 330 TGPMGSFLPELFPT--------EVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALA 390 (394)
T ss_pred hhhHHHHHHHhCCc--------cceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHH
Confidence 88888888888874 4557777764 445567888999999999987 5 665555554433
No 65
>PRK10054 putative transporter; Provisional
Probab=99.98 E-value=5.6e-30 Score=252.17 Aligned_cols=339 Identities=15% Similarity=0.069 Sum_probs=256.9
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQML 177 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l 177 (524)
+|++. .+.|++.+.+.++..+++++.|+++||+|||++++++.++.+++.++.+++ ++++.+++.|++
T Consensus 38 ~g~s~-------~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 105 (395)
T PRK10054 38 YSLSV-------DLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLV-----NNVTLVVLFFAL 105 (395)
T ss_pred cCCCH-------HHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHH-----hHHHHHHHHHHH
Confidence 88887 999999999999999999999999999999999999999999998888886 889999999999
Q ss_pred HHHhhhcchhhHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhhhcCchhHHHHhHHHHHHHHHHHHHhcCCC
Q 009816 178 AGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALLTYGWGWSFVVPGLIIAFVGLIVFLFLPVN 257 (524)
Q Consensus 178 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~ 257 (524)
.|.+.+...+...++..|.+|+++|++++++.....++|.+++|++++++.+.+|+.+|++.+++.++..++..+.+|++
T Consensus 106 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~~g~~~~f~~~~~~~~i~~i~~~~~~~~~ 185 (395)
T PRK10054 106 INCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVMQSINLPFWLAAICSAFPLVFIQIWVQRS 185 (395)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99888888888999999999999999999999999999999999999998888999999998877766655555556554
Q ss_pred CCCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 009816 258 PESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTA 337 (524)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (524)
++++++++ . +..+.++.+++|+++...+..++..+.......+.+.|....
T Consensus 186 ~~~~~~~~-------~---------------------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~- 236 (395)
T PRK10054 186 EKAIATET-------G---------------------SVWSPSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVV- 236 (395)
T ss_pred ccccccch-------h---------------------hhhhhhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHh-
Confidence 32210000 0 001124678899998888777776666666666777776543
Q ss_pred cCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhh
Q 009816 338 VDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVN 417 (524)
Q Consensus 338 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 417 (524)
.+.+.+....+.+.....+..+......|++.||.++|+.+..+..+..+....+... ..+.+...+...+.+++..
T Consensus 237 -~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~ 313 (395)
T PRK10054 237 -ADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFS--GNSLLLWGMSAAVFTVGEI 313 (395)
T ss_pred -cccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHc--chHHHHHHHHHHHHHHHHH
Confidence 0146667777778787777777778888999999999998877776665555444321 2344444455666777766
Q ss_pred hhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-ChhHHHHHHHHHHHHHH
Q 009816 418 GPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-SWTAVFTMLMAAALISG 489 (524)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~ 489 (524)
...+.....+.+..|+ +.++++.+..+ ...+|..+||.+.|++.|+ ++...|.+.+.+..+..
T Consensus 314 ~~~p~~~~~~~~~~p~--------~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~ 377 (395)
T PRK10054 314 IYAPGEYMLIDHIAPP--------GMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAW 377 (395)
T ss_pred HHHhhHHHHHHHhCCc--------ccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHH
Confidence 5556655566666553 45577777654 5668999999999999998 77777766655544433
No 66
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.97 E-value=9.9e-30 Score=247.67 Aligned_cols=342 Identities=29% Similarity=0.486 Sum_probs=291.7
Q ss_pred HHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhhHhHHHHHHHHH
Q 009816 43 TFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTALLGELDLAFLSI 122 (524)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~s~~~l~ 122 (524)
+.+..+...++....+...|.+.++ +|.++ .+.+++.+.+.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~-------~~~~~~~~~~~~~ 46 (352)
T cd06174 4 LFLGFFLSGLDRGLLSPALPLLAED------------------------------LGLSA-------SQAGLIVSAFSLG 46 (352)
T ss_pred HHHHHHHHHHhhhhhHhhHHHHHHH------------------------------cCCCH-------HHHHHHHHHHHHH
Confidence 3455666677777777777777766 66665 8999999999999
Q ss_pred HHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHHHHhhccccccc
Q 009816 123 YAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVAVVGNWFGKSKR 202 (524)
Q Consensus 123 ~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 202 (524)
..+++++.|+++||+|||+.+..+.++..++.++...+ ++++.+++.|++.|++.+...+...+++.|++|+|+|
T Consensus 47 ~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~ 121 (352)
T cd06174 47 YALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFA-----SSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKER 121 (352)
T ss_pred HHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHh-----ccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccch
Confidence 99999999999999999999999999999999999986 8999999999999999999999999999999999999
Q ss_pred cceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCccccccCCccccCCCc
Q 009816 203 GLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNEEDESLSPKKIGEGV 281 (524)
Q Consensus 203 ~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (524)
++.+++......+|..++|.+++.+. ..+||+.|++.+++.++..+...+. +
T Consensus 122 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------------------------- 174 (352)
T cd06174 122 GRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFL-L-------------------------- 174 (352)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH-H--------------------------
Confidence 99999999999999999999999988 4689999999888777665544332 2
Q ss_pred ccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHh
Q 009816 282 TQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVL 361 (524)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 361 (524)
|.++...+..++..........+.|.+..+. +|.+..+.+.......++.++
T Consensus 175 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~i 226 (352)
T cd06174 175 ------------------------RLLLLLALAFFLLSFGYYGLLTYLPLYLQEV----LGLSAAEAGLLLSLFGLGGIL 226 (352)
T ss_pred ------------------------HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHh----cCCCHHHHHHHHHHHHHHHHH
Confidence 2355566667777777888889999999886 689999999999999999999
Q ss_pred hhHHHHHHHhhhhhhH-HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCC
Q 009816 362 GGILAGHISDRLDARA-ITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGN 440 (524)
Q Consensus 362 ~~~~~g~l~dr~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (524)
+.++.+++.||+++|+ .+..+..+..++.+..... .+.+...+..++.|++.+...+.......+..|+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~------- 296 (352)
T cd06174 227 GALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALA---PSLALLLVALLLLGFGLGFAFPALLTLASELAPP------- 296 (352)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCH-------
Confidence 9999999999999999 8877777777666655432 3356667777888898888888888888888773
Q ss_pred ccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-ChhHHHHHHHHHHHHHHHHH
Q 009816 441 SRALATVTAIIDGTGSVGAAIGPLLTGYISAT-SWTAVFTMLMAAALISGLLL 492 (524)
Q Consensus 441 ~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~ 492 (524)
+.+++..|+.+....++..++|.+.|.+.+. +++..+.+.+++.+++.++.
T Consensus 297 -~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 297 -EARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLL 348 (352)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHh
Confidence 7789999999999999999999999999977 89999998888877765554
No 67
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.97 E-value=7.8e-29 Score=244.49 Aligned_cols=336 Identities=17% Similarity=0.191 Sum_probs=232.2
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHH-HHHhhhhhhhcccccCCchhhH-HHHHHHHHHHHHHHhccccccchhHHHHHHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLS-IYAGGMFFSGHLGDRLDLRIFL-TVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQ 175 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l-~~~~~~~~~G~l~Dr~Grr~~l-~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r 175 (524)
+|+++ ++.|++.+.+.+ ++.++.+++|+ .||+||||.+ +.+.++.+++..+.+++ ++++.+++.+
T Consensus 46 ~~~s~-------~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~ 112 (393)
T PRK15011 46 VHARP-------AMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWN-----RNYFVLLFVG 112 (393)
T ss_pred cCCCH-------HHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHh-----hHHHHHHHHH
Confidence 78877 999999776544 66666666666 9999999874 55666666777777786 8888877666
Q ss_pred HHHHHhhhcchhhHHHHHhhcccccccc--ceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHH
Q 009816 176 MLAGLFQSTGWPSVVAVVGNWFGKSKRG--LIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFL 252 (524)
Q Consensus 176 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~--~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~ 252 (524)
.+.|...+...|...+++.++.++++|. ...++...+.++|.++||++++.+. ++|||..|++.+++.++.+++.++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 192 (393)
T PRK15011 113 VFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWL 192 (393)
T ss_pred HHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHh
Confidence 6555445567888888888888765553 3457888899999999999999998 679999999998888887777777
Q ss_pred hcCCCCCCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcC-CCcHHHHHHHHHHHHHHHHHHHHHHH
Q 009816 253 FLPVNPESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKI-PGVAPFALCLFFAKLVAYTFLYWLPF 331 (524)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (524)
.+||.+++++..+. +.+ ...++ +..+.......+.......+..++|.
T Consensus 193 ~~~~~~~~~~~~~~----------~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 241 (393)
T PRK15011 193 FLPSMRKELPLATG----------TLE---------------------APRRNRRDTLLLFVICTLMWGTNSLYIINMPL 241 (393)
T ss_pred hcCccCCCCccccc----------ccc---------------------ccccccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78876433211000 000 00011 12222333333444455556678999
Q ss_pred HHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHH
Q 009816 332 YVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFI 411 (524)
Q Consensus 332 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (524)
|+++. +|+++.+.+.+.....++.+++.++.|+++||+++|+.+..+.....+....... ..+.+..+...++
T Consensus 242 ~l~~~----~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~l 314 (393)
T PRK15011 242 FIINE----LHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLM---AHSPAILLGLQLL 314 (393)
T ss_pred HHHHH----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH---HhhHHHHHHHHHH
Confidence 99877 7999999998888877888889999999999999998776654444333222211 2233333444444
Q ss_pred HHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-ChhHHHHHHHHHHHHHHH
Q 009816 412 TGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-SWTAVFTMLMAAALISGL 490 (524)
Q Consensus 412 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~ 490 (524)
.+++.+...+.......+..| +.++++.++.+...++|..++|.+.|.+.|. +|+..+.+..++.+++.+
T Consensus 315 ~~~~~g~~~~~~~~~~~~~~p---------~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~ 385 (393)
T PRK15011 315 NAIYIGILGGIGMLYFQDLMP---------GQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLF 385 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhCC---------CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 444444444444444555444 3468999999888999999999999999997 898888877766666554
Q ss_pred HHH
Q 009816 491 LLT 493 (524)
Q Consensus 491 ~~~ 493 (524)
...
T Consensus 386 ~~~ 388 (393)
T PRK15011 386 CLL 388 (393)
T ss_pred HHH
Confidence 444
No 68
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.97 E-value=2.6e-29 Score=247.78 Aligned_cols=362 Identities=12% Similarity=0.092 Sum_probs=271.5
Q ss_pred HHHHHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhhHhHHHHHH
Q 009816 40 LIVTFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTALLGELDLAF 119 (524)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~s~~ 119 (524)
+.++++.++...+.....+++.|.++++ +|+++ .+.|++.+.+
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~------------------------------~~~s~-------~~~g~l~s~~ 47 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQA------------------------------FTLTA-------FQAALVQSAF 47 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHH------------------------------hCCCH-------HHHHHHHHHH
Confidence 4455566666677777778888999888 88877 9999999999
Q ss_pred HHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHHHHhhcccc
Q 009816 120 LSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVAVVGNWFGK 199 (524)
Q Consensus 120 ~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 199 (524)
.+++.+++++.|++.||+|||++++++.++++++.+++..+ ...++++.+++.|++.|+|.+...+....++.+..|+
T Consensus 48 ~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~--~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~ 125 (410)
T TIGR00885 48 YGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPA--AEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPE 125 (410)
T ss_pred HHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH--HhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCH
Confidence 99999999999999999999999999999999998886442 0126899999999999999999999999999999999
Q ss_pred ccccceehhhhhhhhhHHHHHHHHHHHhhh---------------------------cCchhHHHHhHHHHHHHHHHHHH
Q 009816 200 SKRGLIMGIWNAHTSIGNITGSLVASALLT---------------------------YGWGWSFVVPGLIIAFVGLIVFL 252 (524)
Q Consensus 200 ~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~---------------------------~gwr~~f~~~~~~~~~~~~~~~~ 252 (524)
++|++.+++.+...++|..++|.++..+.. .+||++|++.+++.++..++..
T Consensus 126 ~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~- 204 (410)
T TIGR00885 126 STATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIM- 204 (410)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 999999999999999999999999887741 2599999998887776544332
Q ss_pred hcCCCCCCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Q 009816 253 FLPVNPESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFY 332 (524)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (524)
+.+ .|+.+.. ++++ . +.....++.+|+|+++...+..++......+..++++.|
T Consensus 205 ~~~-~p~~~~~---~~~~--~--------------------~~~~~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y 258 (410)
T TIGR00885 205 LTK-MPALNHS---DAKQ--I--------------------SFSASLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQY 258 (410)
T ss_pred Hhc-CCCCCcc---cccc--c--------------------cchhhHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222 1211100 0000 0 001123467888888888888888777777888899999
Q ss_pred HhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHH
Q 009816 333 VSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFIT 412 (524)
Q Consensus 333 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (524)
.++.. .+.+....+...+....+..+|+++++++.||+++|+.+.+......+..++.... ++ ......+.+.
T Consensus 259 ~~~~~---~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~---~~-~~~~~~l~~~ 331 (410)
T TIGR00885 259 AVRLI---PGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFA---GG-HVGLYCLTLC 331 (410)
T ss_pred Hhhcc---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHc---CC-hHHHHHHHHH
Confidence 87641 24444444555666667888999999999999999998877777666665555432 22 2335667778
Q ss_pred HhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-------ChhHHHHHHHHH
Q 009816 413 GMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-------SWTAVFTMLMAA 484 (524)
Q Consensus 413 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-------~~~~~~~~~~~~ 484 (524)
|++.+..++...+...+.++++ ....+.++... .+|+++.|++.|++.|. +++..|++...+
T Consensus 332 glf~s~~fp~i~sl~~~~~g~~--------~~~~s~~l~~~--~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~ 400 (410)
T TIGR00885 332 SAFMSLMFPTIYGIALKGLGQD--------TKYGAAGLVMA--IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLC 400 (410)
T ss_pred HHHHHHHHHHHHHHHHhhhhhh--------hhhhHHHHHHH--HhccchHHHHHHHHHHHhcccccCccchHHHHHHHH
Confidence 8889999999999998888742 22223333333 49999999999999993 366666654433
No 69
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.97 E-value=9.1e-29 Score=243.04 Aligned_cols=357 Identities=16% Similarity=0.099 Sum_probs=268.7
Q ss_pred HHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhhHhHHHHHHHHH
Q 009816 43 TFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTALLGELDLAFLSI 122 (524)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~s~~~l~ 122 (524)
+.+.++..+.......+..|.+.++ +|++. +++|++.+.+.+.
T Consensus 9 l~~~~~~~~~~~~~~~p~l~~~l~~------------------------------~g~s~-------~~ig~~~s~~~~~ 51 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFFPAWLKG------------------------------IGLGE-------EMIGLLIGAALIA 51 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH------------------------------cCCCH-------HHHHHHHHHHHHH
Confidence 3344555555555555566666666 88887 9999999999999
Q ss_pred HHhhhhhhhcccccCCchhhH----HHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHHHHhhccc
Q 009816 123 YAGGMFFSGHLGDRLDLRIFL----TVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVAVVGNWFG 198 (524)
Q Consensus 123 ~~~~~~~~G~l~Dr~Grr~~l----~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~ 198 (524)
..++++++|+++||+|||+.. ..+..+..+ ..+..+ ++++.+++.|+++|.+.+...|...++..++
T Consensus 52 ~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~--~~~~~~-----~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~-- 122 (382)
T TIGR00902 52 RFAGGLFFAPLIKDANHIIIALRLLALASAIFAA--AFSAGA-----HNAWLLFIAIGLFALFFSAGMPIGDALANTW-- 122 (382)
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH--HHHHhh-----hhHHHHHHHHHHHHHHHccchhHHHHHHHHH--
Confidence 999999999999999985433 222222222 233344 8899999999999999888889988887664
Q ss_pred cccccceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCccccccCCcccc
Q 009816 199 KSKRGLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNEEDESLSPKKI 277 (524)
Q Consensus 199 ~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (524)
+++|+++.+......++|.+++|++++.+. ++|||..|++.+.+. +..++. +.++++++..++.+ + + .
T Consensus 123 ~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~-~~~~~~-~~~~~~~~~~~~~~-~--~--~---- 191 (382)
T TIGR00902 123 QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGL-AFMLIG-FLIKPTIPPKDAIP-E--D--E---- 191 (382)
T ss_pred HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHH-HHHHHH-HHcCCCCCCCcccc-c--c--c----
Confidence 468999999999999999999999999988 579999998876543 222333 33333321110000 0 0 0
Q ss_pred CCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHH
Q 009816 278 GEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDV 357 (524)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 357 (524)
.+.....++++|+|+++...+..++..........+.|.|+++ .|.++.+.|.+.....+
T Consensus 192 ---------------~~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-----~g~s~~~~g~l~~~~~~ 251 (382)
T TIGR00902 192 ---------------SQGDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-----AGISASATGLLWGIGVL 251 (382)
T ss_pred ---------------cccchhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----CCCCHhHHHHHHHHHHH
Confidence 0011235678899999999888888888888888999999987 59999999999999999
Q ss_pred HHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccC
Q 009816 358 GGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSL 437 (524)
Q Consensus 358 ~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 437 (524)
+.+++.++.+++.||++.|+.+.++.+...+....... .++.+..+...++.|+..+...+....++.+. |
T Consensus 252 ~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~----- 322 (382)
T TIGR00902 252 AEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGA---IEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-P----- 322 (382)
T ss_pred HHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHh---HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-C-----
Confidence 99999999999999999999998888877777655543 35666677778889999888888887777765 4
Q ss_pred CCCccchhHHHHHHHh-hhhhhhhhhhhhhHhhccc-ChhHHHHHHHHHHHHHH
Q 009816 438 KGNSRALATVTAIIDG-TGSVGAAIGPLLTGYISAT-SWTAVFTMLMAAALISG 489 (524)
Q Consensus 438 ~~~~~~~g~~~g~~~~-~~~~g~~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~ 489 (524)
++.+++..++++. ...+|..++|.+.|++.|. ++ ..|...+++.+++.
T Consensus 323 ---~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~ 372 (382)
T TIGR00902 323 ---GSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAF 372 (382)
T ss_pred ---HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHH
Confidence 3556888998864 5679999999999999998 64 56767666665543
No 70
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.97 E-value=1.6e-29 Score=244.70 Aligned_cols=381 Identities=16% Similarity=0.119 Sum_probs=271.2
Q ss_pred hhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhH
Q 009816 110 ALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSV 189 (524)
Q Consensus 110 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~ 189 (524)
...+.+.+++.+|.++|++..|+++||+|||..++++.++..++.+++.++ ...+++.+++++|++.|+..|......
T Consensus 60 ~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s--~~~~~~e~li~GR~i~Gl~~gl~~~~~ 137 (485)
T KOG0569|consen 60 LLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLS--KSAPSFEMLILGRLIVGLACGLSTGLV 137 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHH--HHhhhHHHHHHHHHHHHHHhHHHHHHH
Confidence 557788999999999999999999999999999999999988888877765 224899999999999999999999999
Q ss_pred HHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhh---hcCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCC-CC
Q 009816 190 VAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL---TYGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGT-DT 265 (524)
Q Consensus 190 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~---~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 265 (524)
..++.|..|++.||......+.+..+|.+++..++.--. .-.|++.+.+..+++++. ++.+.++||+|++.-. ++
T Consensus 138 pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~-l~~l~~~PESPk~Ll~~k~ 216 (485)
T KOG0569|consen 138 PMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQ-LALLPFLPESPKYLLIKKG 216 (485)
T ss_pred HHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHH-HHHHhcCCCCcchHHHHcC
Confidence 999999999999999999999999999999977664322 236999998877766665 6678889999998655 33
Q ss_pred ccccccCCcc---ccCCCcccc-----cccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHH-----HHHHHHHHHHH
Q 009816 266 NEEDESLSPK---KIGEGVTQP-----LLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLV-----AYTFLYWLPFY 332 (524)
Q Consensus 266 ~~~~~~~~~~---~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 332 (524)
+++++.+..+ .+.+..++. ..++++..+++..++++++++|..+.-....+...+. ......+...+
T Consensus 217 ~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i 296 (485)
T KOG0569|consen 217 DEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSI 296 (485)
T ss_pred CHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHH
Confidence 3333322111 111101100 0011111122566788999998876643332222221 22334455555
Q ss_pred HhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchh---HH---HHH
Q 009816 333 VSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLS---LA---LNI 406 (524)
Q Consensus 333 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~ 406 (524)
+.+ .|++..++.+.....++..++.++++.++.||.|||.+++.+..++.+..+++.......+ .| ..+
T Consensus 297 ~~~-----aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i 371 (485)
T KOG0569|consen 297 FKT-----AGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCI 371 (485)
T ss_pred HHH-----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 555 4999999999999999999999999999999999999999988888777666543211111 11 223
Q ss_pred HHHHHHHhhhhhh-hHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-ChhHHHHHHHHH
Q 009816 407 ALMFITGMFVNGP-YALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-SWTAVFTMLMAA 484 (524)
Q Consensus 407 ~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~~~~~~~~ 484 (524)
++.+++.++++.. .+......+|.+| ++.|+.+.++...++.+...+-......+.+. |- ..|....+.
T Consensus 372 ~~~~~~~~~f~~G~gpi~~fi~aELf~--------~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~ 442 (485)
T KOG0569|consen 372 AAIFLFIISFAIGPGPIPWFIGAELFP--------QSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIP 442 (485)
T ss_pred HHHHHHHHhhhcCCCchhHHHHHHhCC--------ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHH
Confidence 4444555555544 3444555566666 47788999999999988888888888888776 43 556666555
Q ss_pred HHHHHHHHHHHHHHHhhhhhhccc
Q 009816 485 ALISGLLLTRLVVAEVAAKFVESR 508 (524)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~ 508 (524)
+++..+ ..+...||+|+|...+.
T Consensus 443 ~~~~~i-~~~~~lPETkgr~~~eI 465 (485)
T KOG0569|consen 443 LAIFLI-YLYRYLPETKGRTPYEI 465 (485)
T ss_pred HHHHHH-HHHHhCcccCCCCHHHH
Confidence 555444 44467789998876554
No 71
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=1.6e-30 Score=236.91 Aligned_cols=353 Identities=19% Similarity=0.155 Sum_probs=277.1
Q ss_pred CCCCchhhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhh
Q 009816 104 NGSDGTALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQS 183 (524)
Q Consensus 104 ~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~ 183 (524)
+.+.+.+++|++.+.+.+.+.+.+++.|.+.||+|+|..+++|++++..+++++++. ++++.++++|.+||+|.+
T Consensus 100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg-----~sy~~l~vAR~LQgvgsA 174 (464)
T KOG3764|consen 100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFG-----NSYPMLFVARSLQGVGSA 174 (464)
T ss_pred CccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHc-----chhHHHHHHHHHhhhhHH
Confidence 334455899999999999999999999999999999999999999999999999997 999999999999999999
Q ss_pred cchhhHHHHHhhccccc-cccceehhhhhhhhhHHHHHHHHHHHhhh-cCchhHHHHhHHHHHHHHHHHHHhcCCCCCCC
Q 009816 184 TGWPSVVAVVGNWFGKS-KRGLIMGIWNAHTSIGNITGSLVASALLT-YGWGWSFVVPGLIIAFVGLIVFLFLPVNPESV 261 (524)
Q Consensus 184 ~~~~~~~~~i~~~~~~~-~r~~~~~~~~~~~~~G~~ig~~l~~~l~~-~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (524)
+...+..++++|.||++ +|++++|+...+.++|.++||+.||++++ .|.+.+|++.+++.++-+.+.++.++.+..+.
T Consensus 175 ~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~ 254 (464)
T KOG3764|consen 175 FADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDP 254 (464)
T ss_pred HHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCc
Confidence 99999999999999875 47999999999999999999999999995 59999999999999998887777776433222
Q ss_pred CCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCC
Q 009816 262 GTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGK 341 (524)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (524)
+.. ++..++++++++|.++........++......-..++.+..+. +
T Consensus 255 ~~~-----------------------------~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~----m 301 (464)
T KOG3764|consen 255 DST-----------------------------EQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLET----M 301 (464)
T ss_pred ccc-----------------------------ccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHh----c
Confidence 110 0223467899999988877776666666666667788887777 6
Q ss_pred CCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhH
Q 009816 342 YLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYA 421 (524)
Q Consensus 342 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 421 (524)
..+..+.|+.+....+...++..+.|.+.||++..+++.....+...+...... ...++....++..+..+++.+....
T Consensus 302 ~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~i-P~~~~~~~L~vp~~~l~~~i~~~da 380 (464)
T KOG3764|consen 302 FTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPI-PFATSIAQLWVPNFGLGFGIGLADA 380 (464)
T ss_pred cCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchh-HhhhhHHHHhhhhHHHHHHHHHHHH
Confidence 666669999999999999999999999999998655544433333333222221 1123444445555555666666666
Q ss_pred HHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-ChhHHHHHHHHHHHHHHHHHHHHHH
Q 009816 422 LITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-SWTAVFTMLMAAALISGLLLTRLVV 497 (524)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (524)
.........++.++.- + -+..|.+.++.....++|.++||.++|.+.+. |+++...+.++..++..-+..+++.
T Consensus 381 sl~P~l~~lvd~rh~s-~-~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iyapvl~ll~~ 455 (464)
T KOG3764|consen 381 SLIPTLGYLVDPRHVS-G-FNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYAPVLLLLRI 455 (464)
T ss_pred HHhhhhHHhcchhhcc-c-cceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666666666544320 0 12679999999999999999999999999998 9999888888887776666655443
No 72
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.97 E-value=9.4e-29 Score=246.98 Aligned_cols=347 Identities=19% Similarity=0.221 Sum_probs=273.7
Q ss_pred chhhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchh
Q 009816 108 GTALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWP 187 (524)
Q Consensus 108 ~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~ 187 (524)
++..++++.++..+...+.++++|.++||++|||+++.+.++.++..++.++....+..+.+.+++.-++.|++.+...|
T Consensus 43 S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~P 122 (524)
T PF05977_consen 43 SPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNP 122 (524)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 44899999999999999999999999999999999999998877666555543233346889999999999999999999
Q ss_pred hHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCc
Q 009816 188 SVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTN 266 (524)
Q Consensus 188 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (524)
+.++++.+..|+++...++++.+...++..++||.++|.+. .+|-.+.|.+.++..++. +......+..++.... +
T Consensus 123 A~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~-i~~l~~~~~~~~~~~~-~- 199 (524)
T PF05977_consen 123 AWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLIS-ILALLRWKPPPPPSSL-P- 199 (524)
T ss_pred HHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHcccccccccc-c-
Confidence 99999999999999999999999999999999999999988 578889999887655544 3333333322111100 0
Q ss_pred cccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChh
Q 009816 267 EEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSE 346 (524)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 346 (524)
+ +...+..+..++.+.++|.+....+..++.++........+|.+.++. +|.++.
T Consensus 200 ~---------------------e~~~~~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~----l~~~a~ 254 (524)
T PF05977_consen 200 R---------------------ERFFSALREGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDV----LGGGAS 254 (524)
T ss_pred h---------------------hhhhhhHHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHH----hCCcHH
Confidence 0 001112334556667777777666666666666666677899999887 799999
Q ss_pred hhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHH
Q 009816 347 MAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTA 426 (524)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 426 (524)
..|++.+..++|.++|+++.+++.+|+++++.+..+.+..+++.+.+.+ ..+.+...+.+++.|++.........+.
T Consensus 255 ~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal---~~~~~~~~~~l~l~G~~~~~~~~~~~t~ 331 (524)
T PF05977_consen 255 GYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLAL---SPSFWLALIALFLAGAAWIIANSSLNTL 331 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhc---chHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999888887777766665555443 3566677777888898888888888888
Q ss_pred HHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-ChhHHHHHHHHHHHHHHHHHH
Q 009816 427 VSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-SWTAVFTMLMAAALISGLLLT 493 (524)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~ 493 (524)
.+...| ++.+|++++++.+....+..+|..+.|.+.+. |.+.++.+.++..+++.++..
T Consensus 332 ~Q~~~P--------~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 332 VQLSVP--------DWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHhCC--------HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 888887 47789999999999999999999999999998 888888777665555555444
No 73
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.97 E-value=5.4e-29 Score=242.62 Aligned_cols=315 Identities=16% Similarity=0.189 Sum_probs=238.8
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQML 177 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l 177 (524)
+|+++ ++.|++.+.+.+++.+++++.|+++||+|||+++.++.++..++.+++ .+ ++++.+++.|++
T Consensus 30 ~~~s~-------~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~-----~~~~~l~~~~~~ 96 (355)
T TIGR00896 30 LGMSF-------SVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SA-----PGTALLFAGTAL 96 (355)
T ss_pred hCCCH-------HHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-Hh-----ccHHHHHHHHHH
Confidence 88887 999999999999999999999999999999999999998888888777 54 788999999999
Q ss_pred HHHhhhcchhhHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhhh-c--CchhHHHHhHHHHHHHHHHHHHhc
Q 009816 178 AGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALLT-Y--GWGWSFVVPGLIIAFVGLIVFLFL 254 (524)
Q Consensus 178 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~-~--gwr~~f~~~~~~~~~~~~~~~~~~ 254 (524)
.|++.+...+....++.|++| ++|++++++...+..+|..+++.+++.+.+ . +||+.|...+++.++. ...++
T Consensus 97 ~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~---~~~~~ 172 (355)
T TIGR00896 97 IGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLA---LLAWI 172 (355)
T ss_pred HHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH---HHHHh
Confidence 999999888888888999986 689999999999999999999999888763 2 3999988776544432 22334
Q ss_pred CCCCCCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009816 255 PVNPESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVS 334 (524)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (524)
|+.+++.+.++ . . .....++.+|+|.++...+..++....++....++|.|++
T Consensus 173 ~~~~~~~~~~~----~-------~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~ 225 (355)
T TIGR00896 173 PQVRRRVAANQ----T-------T----------------TRLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILI 225 (355)
T ss_pred hhhccccCCCC----C-------C----------------CCCCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44322111000 0 0 0011245677888877766666667777788889999998
Q ss_pred hcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhh-hhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 009816 335 HTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLD-ARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITG 413 (524)
Q Consensus 335 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 413 (524)
+ +|+++.+.+.+.+...++.++++++.|++.||++ +|+.+..+..+.+++.+.+... ...+ .. ....+.|
T Consensus 226 ~-----~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~--~~~~l~g 296 (355)
T TIGR00896 226 S-----HGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFA-PMHG-LW--AWALVLG 296 (355)
T ss_pred H-----cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHh-hhhH-HH--HHHHHHH
Confidence 7 4899999999999999999999999999999995 5555555555555544443322 1122 11 2345678
Q ss_pred hhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc
Q 009816 414 MFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT 472 (524)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 472 (524)
++.+..++.......+..++ ++.++...++.+....++..++|.+.|++.|.
T Consensus 297 ~~~g~~~~~~~~~~~~~~~~-------~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~ 348 (355)
T TIGR00896 297 LGQGGAFPLALTLIGLRSRQ-------AAQAAALSAMAQSIGYLLAALGPLFVGVLHDI 348 (355)
T ss_pred HhhhhHhHHHHHHHHHhccC-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88777777665655544332 35668889999999999999999999999887
No 74
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.97 E-value=1.8e-28 Score=273.96 Aligned_cols=341 Identities=16% Similarity=0.078 Sum_probs=255.2
Q ss_pred hhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHH---HHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcch
Q 009816 110 ALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTV---GMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGW 186 (524)
Q Consensus 110 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~---~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~ 186 (524)
...++..+++.+++.++++++|+++||+|||+++.. +.++..+..+....+ ++++.++++|+++|++.++..
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~-----~s~~~l~~~~~l~gi~~a~~~ 126 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHL-----NSVPLLFAALFLMGIHSALFG 126 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHH-----hhHHHHHHHHHHHHHHHHhhc
Confidence 557888999999999999999999999999997533 222222222222232 789999999999999999999
Q ss_pred hhHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCC
Q 009816 187 PSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDT 265 (524)
Q Consensus 187 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (524)
|+..+++.+++++++|++++|+.+++.++|.++||++++++. ..+|++.|+. +++..+.+++..+.+|+.+......+
T Consensus 127 p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (1140)
T PRK06814 127 PIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVAL-LMGIAVLGWLASLFIPKTGNAAPDLK 205 (1140)
T ss_pred hHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHH-HHHHHHHHHHHHhhCCCCCCCCCCCe
Confidence 999999999999999999999999999999999999999998 5799999844 44444444555666665433211100
Q ss_pred ccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCh
Q 009816 266 NEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSS 345 (524)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 345 (524)
.+. ...++....++.+.++|.++...+..++.++.......++|.|+++. +|.++
T Consensus 206 ~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~----~g~~~ 260 (1140)
T PRK06814 206 IDR---------------------NIIRSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKET----LGGDE 260 (1140)
T ss_pred ecc---------------------chHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHH----cCCch
Confidence 000 00011223567788899999888888888778788888999999987 79999
Q ss_pred hhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHh-----------------hcchhHHHHHHH
Q 009816 346 EMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRS-----------------YGHLSLALNIAL 408 (524)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~ 408 (524)
...+++.+..+++.+++.++.|++.++..+++.+..+.++..+..+.+... ....+.+..++.
T Consensus 261 ~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (1140)
T PRK06814 261 NVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILID 340 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHH
Confidence 999999999999999999999999988776665554444443333322211 011344555667
Q ss_pred HHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc--ChhHHHHHHHHHHH
Q 009816 409 MFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT--SWTAVFTMLMAAAL 486 (524)
Q Consensus 409 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~--~~~~~~~~~~~~~~ 486 (524)
.+++|++.+...+...+.+.+..| ++.+|+++|+.+++..++..+++.+.|.+.+. ++...+.+.+++.+
T Consensus 341 ~~~~g~~~~~~~~~~~~~~~~~~p--------~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~ 412 (1140)
T PRK06814 341 LFGLAAAGGLYIVPLFAALQAWAN--------PAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILFIALANL 412 (1140)
T ss_pred HHHHHHHHHHhHHHHHHHHHhhCC--------cccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 777888888888888888888877 46779999999999999999999999998754 56655555555444
Q ss_pred HHH
Q 009816 487 ISG 489 (524)
Q Consensus 487 ~~~ 489 (524)
+..
T Consensus 413 ~~~ 415 (1140)
T PRK06814 413 IVA 415 (1140)
T ss_pred HHH
Confidence 333
No 75
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.97 E-value=1.3e-28 Score=245.47 Aligned_cols=356 Identities=14% Similarity=0.061 Sum_probs=235.5
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhc---cccccchhHHHHHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGI---GYWGNVHSFYYYLVV 174 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~---a~~~~~~~~~~~~~~ 174 (524)
+|++. .+.|++.+.+.++..++++++|+++||+|||++++++..+.+++...... +.......+...++.
T Consensus 41 ~g~s~-------~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (420)
T PRK09528 41 NGLSG-------TDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVG 113 (420)
T ss_pred cCCCH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78777 99999999999999999999999999999999998876665544332211 100000111112233
Q ss_pred HHHHHHhhhcchhhHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhhhcCchhHHHHhHHHHHHHHHHHHHhc
Q 009816 175 QMLAGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALLTYGWGWSFVVPGLIIAFVGLIVFLFL 254 (524)
Q Consensus 175 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~gwr~~f~~~~~~~~~~~~~~~~~~ 254 (524)
+++.|.+.....+....+..+ . .+++++.++......++|..++|++++.+.+.+|+++|++.+++.++..++.++..
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~f~~~~~~~~~~~~~~~~~~ 191 (420)
T PRK09528 114 GIYLGFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIAGILFNINPQINFWLGSGSALILLVLLFFAK 191 (420)
T ss_pred HHHhhhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHHHHHHhcCchHhHHHHHHHHHHHHHHHhccc
Confidence 344444333333333333322 2 34678888999999999999999999998878999999998877776655544444
Q ss_pred CCCCCCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009816 255 PVNPESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVS 334 (524)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (524)
+|.+++....+ +++ +. +.+......++.+|+|.++...+...+....+.....+.|.|+.
T Consensus 192 ~~~~~~~~~~~--~~~------~~------------~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~ 251 (420)
T PRK09528 192 PDAPSTAKVAN--ALG------AN------------ASAVSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFA 251 (420)
T ss_pred ccccchhhhcc--chh------cc------------cccccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHH
Confidence 43322111000 000 00 00001223456788998877666555555555555566777776
Q ss_pred hcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHh
Q 009816 335 HTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGM 414 (524)
Q Consensus 335 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 414 (524)
+...+ .+.+..+.+.+.++..++.+++.++.|++.||+++|+.+..+..+..+...+... .++.+..+....+.++
T Consensus 252 ~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~---~~~~~~~~~~~~l~g~ 327 (420)
T PRK09528 252 SFFAT-PEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGF---ATGPLEVSILKLLHAF 327 (420)
T ss_pred HHHhc-cCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHh---cccHHHHHHHHHHHHH
Confidence 54111 2566677889889888999999999999999999999887777766665554432 2344555555666666
Q ss_pred hhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHH-HHhhhhhhhhhhhhhhHhhccc-ChhHHHHHHHHHHHHHHHHH
Q 009816 415 FVNGPYALITTAVSADLGTHSSLKGNSRALATVTAI-IDGTGSVGAAIGPLLTGYISAT-SWTAVFTMLMAAALISGLLL 492 (524)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~-~~~~~~~g~~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~ 492 (524)
..+........++.+..|+ +.+++..+. .++...+|.+++|.+.|++.|. ||+.+|...+++.++..++.
T Consensus 328 ~~~~~~~~~~~~~~~~~~~--------~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~ 399 (420)
T PRK09528 328 EVPFLLVGVFKYITLNFDV--------RLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLIS 399 (420)
T ss_pred HHHHHHHHHHHHHHHHcCc--------cceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHH
Confidence 6655555555666666653 445665554 5667889999999999999998 99999998888776665554
Q ss_pred HH
Q 009816 493 TR 494 (524)
Q Consensus 493 ~~ 494 (524)
..
T Consensus 400 ~~ 401 (420)
T PRK09528 400 VF 401 (420)
T ss_pred HH
Confidence 43
No 76
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.97 E-value=3.4e-27 Score=231.98 Aligned_cols=331 Identities=19% Similarity=0.131 Sum_probs=241.4
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhcccccCCch----hhHHHHHHHHHHHHHHHhccccccchhHHHHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGDRLDLR----IFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLV 173 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr----~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 173 (524)
+|++. .++|++.+++.++..++++++|++.||+||| +.+.+...+. .......+ ++++.+++
T Consensus 34 ~g~s~-------~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~~-----~~~~~l~i 99 (382)
T PRK11128 34 QGYTP-------ETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFGA-----HSFWLLFV 99 (382)
T ss_pred cCCCH-------HHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHhc-----ccHHHHHH
Confidence 77777 9999999999999999999999999999994 3333222222 22223333 78999999
Q ss_pred HHHHHHHhhhcchhhHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHH
Q 009816 174 VQMLAGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFL 252 (524)
Q Consensus 174 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~ 252 (524)
.|++.|++.+...|...+++.++ +++|+++.+......++|.++||++++++. ++|||..|++.++..++. ++..+
T Consensus 100 ~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~-~~~~~ 176 (382)
T PRK11128 100 AIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASM-LLGQL 176 (382)
T ss_pred HHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHH-HHHHH
Confidence 99999999998999888888876 457889999999999999999999999998 579999999877644443 33333
Q ss_pred hcCCCCCCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Q 009816 253 FLPVNPESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFY 332 (524)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (524)
..||.+++. + +++ . .++...++++++|+|.++...+..++..........++|.|
T Consensus 177 ~~~~~~~~~---~-~~~---~------------------~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 231 (382)
T PRK11128 177 LRPTIMPQG---E-SRQ---Q------------------ESAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIY 231 (382)
T ss_pred ccCCCCCcc---c-ccc---c------------------cccccchHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHH
Confidence 344321110 0 000 0 00012346788999999988887777777777778888999
Q ss_pred HhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHH
Q 009816 333 VSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFIT 412 (524)
Q Consensus 333 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (524)
+++ .|.++.+.+.+.....++.++..++.+++.||+++|+.+..+.....+..+.+.. .++.+..++..++.
T Consensus 232 ~~~-----~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~ 303 (382)
T PRK11128 232 WQA-----AGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGS---TTALPWLIVIQILH 303 (382)
T ss_pred HHH-----CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHh---hhhHHHHHHHHHHH
Confidence 876 5899999999999888999999999999999999999988777766665544432 34556666677777
Q ss_pred HhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHH-hhhhhhhhhhhhhhHhhccc-ChhHHHHHHHHHHHHH
Q 009816 413 GMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIID-GTGSVGAAIGPLLTGYISAT-SWTAVFTMLMAAALIS 488 (524)
Q Consensus 413 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~-~~~~~g~~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~ 488 (524)
|++.+...+....+..+. + ++.+++..++.+ ....+|..+||.+.|.+.|. ++ ..++..+++.+++
T Consensus 304 g~~~~~~~~~~~~~~~~~-~--------~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~ 371 (382)
T PRK11128 304 CGTFTVCHLAAMRYIAAR-P--------GSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPA 371 (382)
T ss_pred HHHHHHHHHHHHHHHHHC-C--------HhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHH
Confidence 887776666665555543 2 234577888776 44567779999999999998 65 4555555544433
No 77
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.97 E-value=3.6e-27 Score=233.50 Aligned_cols=343 Identities=16% Similarity=0.130 Sum_probs=239.4
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhcccccC-----Cchh-hHHHHHHHHHHHHHHHhccccccchhHHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGDRL-----DLRI-FLTVGMVGTGLFTSLYGIGYWGNVHSFYYY 171 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-----Grr~-~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 171 (524)
.|++. +++|++..+... .+..+++|+++||+ |||| .++++.++.+++..+.++. ...++++.+
T Consensus 29 ~g~~~-------~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~--~~~~~~~~l 97 (402)
T PRK11902 29 EGLDI-------QTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFC--PPHAALWPL 97 (402)
T ss_pred cCCCH-------HHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhc--CccchHHHH
Confidence 67777 999999766665 58999999999999 8875 7888888888777777664 112467888
Q ss_pred HHHHHHHHHhhhcchhhHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhhh--cCchhHHHHhHHHHHHHHHH
Q 009816 172 LVVQMLAGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALLT--YGWGWSFVVPGLIIAFVGLI 249 (524)
Q Consensus 172 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~--~gwr~~f~~~~~~~~~~~~~ 249 (524)
++..++.++..+...++..+++.|++|+++|+++.++...+.++|.++++.+++.+.+ +|||..|++.+++.++..+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l- 176 (402)
T PRK11902 98 AGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGAL- 176 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHH-
Confidence 8888888888888999999999999999999999999999999999999999888875 4999999998887765533
Q ss_pred HHHhcCCCCCCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHH
Q 009816 250 VFLFLPVNPESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWL 329 (524)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (524)
..+..||+++.... +++ ..++....+++++++|.++...+..++..........+.
T Consensus 177 ~~~~~~e~~~~~~~---~~~---------------------~~~~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~ 232 (402)
T PRK11902 177 TTLWAPEPEVPARP---PRS---------------------LGEAVVGPLRDFFSRRGAWALLLLIVLYKLGDAFAGSLS 232 (402)
T ss_pred HHHhcCCCcccccc---cch---------------------hHHHHHHHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHH
Confidence 44556654322110 000 000123346678999998887776666555444333445
Q ss_pred HHHHhhcccCCCCCChhhhhhHHHHHH-HHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHh-hcchhHHHHHH
Q 009816 330 PFYVSHTAVDGKYLSSEMAGNLSTLFD-VGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRS-YGHLSLALNIA 407 (524)
Q Consensus 330 ~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 407 (524)
+.++.+. +|+++.+.+++....+ ++.+++.++.+++.||+++|+.+..+.....+..+.+... ....+.+....
T Consensus 233 ~~~l~~~----~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~ 308 (402)
T PRK11902 233 TTFLIRG----AGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMAL 308 (402)
T ss_pred HHHHHHh----cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHH
Confidence 5556665 6999999999876655 4688999999999999999988766655544443332211 11123333333
Q ss_pred HHHH----HHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-ChhHHHHHHH
Q 009816 408 LMFI----TGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-SWTAVFTMLM 482 (524)
Q Consensus 408 ~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~~~~~~ 482 (524)
...+ .|+..+.........+.+..| ++..++.+....++..+++.+.|.+.|. ||+..|.+.+
T Consensus 309 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~ 376 (402)
T PRK11902 309 AIGIENLCGGMGTAAFVALLMALCNRSFS------------ATQYALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTV 376 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCc------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHH
Confidence 3333 333333334444444443333 3445666666677887777889999998 9998888887
Q ss_pred HHHHHHHHHH
Q 009816 483 AAALISGLLL 492 (524)
Q Consensus 483 ~~~~~~~~~~ 492 (524)
.+++++.++.
T Consensus 377 ~~~~~~~~~~ 386 (402)
T PRK11902 377 VIALPGLALL 386 (402)
T ss_pred HHHHHHHHHH
Confidence 7776664443
No 78
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.97 E-value=2.6e-27 Score=234.62 Aligned_cols=343 Identities=13% Similarity=0.039 Sum_probs=246.6
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhcccccCCc-hhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGDRLDL-RIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQM 176 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Gr-r~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~ 176 (524)
+|++. .|+|++.+++.++..++++++|+++||+|| |+++.++.++.+++..+..+. ++++.+++.|+
T Consensus 33 ~g~s~-------~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 100 (418)
T TIGR00889 33 LHFSG-------AEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQV-----TTPAGMFPVLL 100 (418)
T ss_pred cCCCH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHh-----cCHHHHHHHHH
Confidence 77777 999999999999999999999999999965 778888888888888888875 88999999999
Q ss_pred HHHHhhhcchhhHHHHHhhc--------cccccccceehhhhhhhhhHHHHHHHHHHHhhhc-CchhHHHHhHHHHHHHH
Q 009816 177 LAGLFQSTGWPSVVAVVGNW--------FGKSKRGLIMGIWNAHTSIGNITGSLVASALLTY-GWGWSFVVPGLIIAFVG 247 (524)
Q Consensus 177 l~G~~~~~~~~~~~~~i~~~--------~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~-gwr~~f~~~~~~~~~~~ 247 (524)
+.|++.+...+...++..++ .....|.+..| .+|.++||.+++.+... .|+ +|++.+++.++..
T Consensus 101 l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~ 173 (418)
T TIGR00889 101 ANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLG 173 (418)
T ss_pred HHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHH
Confidence 99998877777666654322 22234555555 46888999988877432 354 3556666665554
Q ss_pred HHHHHhcCCCCCCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHH
Q 009816 248 LIVFLFLPVNPESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLY 327 (524)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (524)
+ ..+.+||.|+..++++.+ ..+....+.++.+|+|+++.+.+..++..........
T Consensus 174 ~-~~~~~~e~~~~~~~~~~~-----------------------~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~ 229 (418)
T TIGR00889 174 V-FALTLPDIPVAKSTAKMS-----------------------IKVMLGLDAFILFKNKRMAIFFFFSMLLGAPLQITNI 229 (418)
T ss_pred H-HHhcCCCCCCCccccccC-----------------------HHHHhhhhHHHHhcCCCeeeHHHHHHHHHhHHHHHHH
Confidence 3 455677654321110000 0000112345678999988888877777666656667
Q ss_pred HHHHHHhhcccCCCCCC--------hhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcc
Q 009816 328 WLPFYVSHTAVDGKYLS--------SEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGH 399 (524)
Q Consensus 328 ~~~~~~~~~~~~~~g~~--------~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (524)
+.+.|+++. |.+ ....+...++..+..+++.+..|++.||+++|+.+..+.++..+...++......
T Consensus 230 ~~~~~~~~~-----g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~ 304 (418)
T TIGR00889 230 FGNGFLHEF-----GRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPE 304 (418)
T ss_pred hHHHHHHHh-----cccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcc
Confidence 778888774 443 3566888899999999999999999999999999988888776665444331111
Q ss_pred h-hHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHH-hhhhhhhhhhhhhhHhhccc-----
Q 009816 400 L-SLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIID-GTGSVGAAIGPLLTGYISAT----- 472 (524)
Q Consensus 400 ~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~-~~~~~g~~i~~~~~g~l~~~----- 472 (524)
. +.+..++..++.|++.+...+.....+.+..| ++.++++.|+.+ ....+|.++||.+.|++.|.
T Consensus 305 ~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p--------~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~ 376 (418)
T TIGR00889 305 YFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVP--------VHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYG 376 (418)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--------HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcccc
Confidence 1 22344455667777777766777777788777 477899999997 56789999999999999886
Q ss_pred --ChhHHHHHHHHHHHHHHHHHHHHH
Q 009816 473 --SWTAVFTMLMAAALISGLLLTRLV 496 (524)
Q Consensus 473 --~~~~~~~~~~~~~~~~~~~~~~~~ 496 (524)
||+..|.+.+++.+++.++..++.
T Consensus 377 ~~~~~~~f~~~~~~~~i~~~l~~~~~ 402 (418)
T TIGR00889 377 TFDWQTMWLFFAGYIAILAVLFMIFF 402 (418)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 378888888877777666655544
No 79
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.96 E-value=5.3e-27 Score=212.38 Aligned_cols=336 Identities=18% Similarity=0.238 Sum_probs=269.8
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQML 177 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l 177 (524)
+|++. +..|++++...+...+.+++..+++.|+|.++.+..++++.+++.++-.. .+.+.++..-.+
T Consensus 42 ~gls~-------s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~------~~~~~L~~gt~l 108 (395)
T COG2807 42 LGLSF-------SVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSL------GGLPLLFLGTLL 108 (395)
T ss_pred hcccH-------HHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhc------ccHHHHHHHHHH
Confidence 88887 99999999999999999999999999999999999999999999999887 578889999999
Q ss_pred HHHhhhcchhhHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhh-hc-CchhHHHHhHHHHHHHHHHHHHhcC
Q 009816 178 AGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL-TY-GWGWSFVVPGLIIAFVGLIVFLFLP 255 (524)
Q Consensus 178 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~-gwr~~f~~~~~~~~~~~~~~~~~~~ 255 (524)
.|.|.+...+..+++|.+.|| |+-+..+++|....++|..+++.+.-.+. +. |||....+.+.++++. ++.|. |
T Consensus 109 ~G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allA-l~~Wl--P 184 (395)
T COG2807 109 AGAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLA-LLIWL--P 184 (395)
T ss_pred HHhhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHH-HHHHh--h
Confidence 999999999999999999996 57899999999999999999999888887 44 7999999988887766 33333 4
Q ss_pred CCCCCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009816 256 VNPESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSH 335 (524)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (524)
...+.+.... .. +..+-..++|+|..|.+.+.+.+....+|....|+|.++.|
T Consensus 185 q~~r~~~~~~-~~--------------------------~~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~ 237 (395)
T COG2807 185 QALREQAASI-AT--------------------------KLVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILID 237 (395)
T ss_pred hccccccccc-cc--------------------------ccccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 3211110000 00 01111357999999999999999999999999999999999
Q ss_pred cccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHH-HHHHHHHHHHHHHhhcchhHHHHHHHHHHHHh
Q 009816 336 TAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAAS-FMYCAIPALFFYRSYGHLSLALNIALMFITGM 414 (524)
Q Consensus 336 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 414 (524)
. |+|+.++|.+.+...+..++.++....+.+|...++.+.+. ...+.++.+-+.+ .+....++. .++.|+
T Consensus 238 ~-----G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~-~P~~~~~lw---~~llG~ 308 (395)
T COG2807 238 R-----GLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLL-APGQLPILW---ALLLGL 308 (395)
T ss_pred c-----CCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHH-hhhhHHHHH---HHHHhC
Confidence 5 99999999999999999999999999999987555544444 3444444433332 233332222 477899
Q ss_pred hhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc--ChhHHHHHHHHHHHHHHHHH
Q 009816 415 FVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT--SWTAVFTMLMAAALISGLLL 492 (524)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~--~~~~~~~~~~~~~~~~~~~~ 492 (524)
+.++.++.....+.....+ ++..+.-.|+.+.++++-.++||.+.|++.|. +|+..++....+.++..+..
T Consensus 309 G~G~~F~laL~li~~rs~~-------a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~G 381 (395)
T COG2807 309 GQGGAFPLALTLILLRSSD-------AAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFG 381 (395)
T ss_pred ccchHHHHHHHHHHhhcCC-------hHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHH
Confidence 9999999888888776543 57778899999999999999999999999998 88888777766665544444
Q ss_pred H
Q 009816 493 T 493 (524)
Q Consensus 493 ~ 493 (524)
+
T Consensus 382 l 382 (395)
T COG2807 382 L 382 (395)
T ss_pred h
Confidence 4
No 80
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.96 E-value=1.2e-27 Score=268.34 Aligned_cols=343 Identities=18% Similarity=0.132 Sum_probs=255.1
Q ss_pred hhhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhh
Q 009816 109 TALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPS 188 (524)
Q Consensus 109 ~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~ 188 (524)
....+++.+++.+++.++++++|+++||+|||++++++.++..+..++..++. ..++++.+++.|+++|++.+...++
T Consensus 46 ~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~r~l~G~~~~~~~~~ 123 (1146)
T PRK08633 46 VILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAY--YLGWFWLAFAVTFLLGAQSAIYSPA 123 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHH--HHccHHHHHHHHHHHHHHHHhhchH
Confidence 36689999999999999999999999999999999998877665555443320 0267999999999999999999999
Q ss_pred HHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhhhc----------CchhHHHHhHHHHHHHHHHHHHhcCCCC
Q 009816 189 VVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALLTY----------GWGWSFVVPGLIIAFVGLIVFLFLPVNP 258 (524)
Q Consensus 189 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~----------gwr~~f~~~~~~~~~~~~~~~~~~~~~~ 258 (524)
..+++.|++|+++|++++++...+..+|.++|+++++++... +|++.+.+.++...+..++..+.+|+.+
T Consensus 124 ~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (1146)
T PRK08633 124 KYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVP 203 (1146)
T ss_pred HHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCC
Confidence 999999999999999999999999999999999999998743 3555554544444444444555567665
Q ss_pred CCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 009816 259 ESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAV 338 (524)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (524)
+...... + +. . ..........++.++++|.++...+..++..........++|.|+.+.
T Consensus 204 ~~~~~~~-~-~~------~-----------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 262 (1146)
T PRK08633 204 AAAPEVF-D-KK------K-----------YLFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEV-- 262 (1146)
T ss_pred CCCcccc-c-cc------c-----------cccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH--
Confidence 4322110 0 00 0 000011233456678888888777777777777777788899999887
Q ss_pred CCCCCChh-hhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhh
Q 009816 339 DGKYLSSE-MAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVN 417 (524)
Q Consensus 339 ~~~g~~~~-~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 417 (524)
+|++.. ..+++.+...++.+++.++.+++.||+++++.+.++.++.+++.+++... .+.+..++..++.|++.+
T Consensus 263 --~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~ 337 (1146)
T PRK08633 263 --LGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTA---PSLASVLVLFFLFGFSAG 337 (1146)
T ss_pred --hCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHH
Confidence 799988 89999999999999999999999999998887777666665555444332 345556667777888887
Q ss_pred hhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc--ChhHHHHHHHHHHHH
Q 009816 418 GPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT--SWTAVFTMLMAAALI 487 (524)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~--~~~~~~~~~~~~~~~ 487 (524)
...+...+.+.+..| ++.+|+++|+.+++..+|..+++.+.+.+... ++...+++.+.+.++
T Consensus 338 ~~~~~~~~~~~~~~p--------~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 401 (1146)
T PRK08633 338 LFIVPLNALIQFRAP--------EKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLI 401 (1146)
T ss_pred HhhHHHHHHHhhcCC--------ccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 777777777777766 36789999999999999998888777666443 344455554444433
No 81
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.96 E-value=2.4e-27 Score=225.90 Aligned_cols=361 Identities=12% Similarity=0.067 Sum_probs=254.7
Q ss_pred HHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhh-HhHHHHHHHHHHHhhh
Q 009816 49 SYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTAL-LGELDLAFLSIYAGGM 127 (524)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~g~~~s~~~l~~~~~~ 127 (524)
...-.|.+.+++.|.+.+| +|+++ +| .|.+.++++.+|+++.
T Consensus 37 F~~e~R~n~s~a~p~L~~e------------------------------lglT~-------~qv~G~I~s~F~ysYal~q 79 (511)
T TIGR00806 37 FMAQFRPGESFITPYLLTV------------------------------LNFTE-------ETVTNEIIPVLPYSHLAVL 79 (511)
T ss_pred HHHHhhchHHHHHHHHHHH------------------------------cCCCH-------HHhcchHHHHHHHHHHHHH
Confidence 3444699999999999988 89988 88 9999999999999999
Q ss_pred hhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHHHHhhccccccccceeh
Q 009816 128 FFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVAVVGNWFGKSKRGLIMG 207 (524)
Q Consensus 128 ~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~ 207 (524)
++.|+++||+|.|+++.++.+.+++..++.+++ +++..+.+.|++.|++.|... +...++..|+|+++|+++.+
T Consensus 80 Ip~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa-----~Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~rats 153 (511)
T TIGR00806 80 VPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLG-----TSVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAA 153 (511)
T ss_pred HHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHH
Confidence 999999999999999999999999999999997 899999999999999999999 99999999999999999999
Q ss_pred hhhhhhhhHHHHHHHHHHHhhhcCchhHHHHh--HHHHHHHHHHHHHhcCCCCCCCCCCCccc-c-ccCCccccCCCccc
Q 009816 208 IWNAHTSIGNITGSLVASALLTYGWGWSFVVP--GLIIAFVGLIVFLFLPVNPESVGTDTNEE-D-ESLSPKKIGEGVTQ 283 (524)
Q Consensus 208 ~~~~~~~~G~~ig~~l~~~l~~~gwr~~f~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~ 283 (524)
+..++..+|.++++++++++..+|||+-+.+. .+.+..++++..+++|..++..-..+.+. + ......+...+.+.
T Consensus 154 i~~sg~~vG~~Ia~~L~qll~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~ 233 (511)
T TIGR00806 154 YSRAAVLLGVFLSSVLGQLLVTLGWISYSTLNIISLVFMTFSVFLALFLKRPKRSLFFNRLEDVRGALPCELDQMVPGPG 233 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhhccccccccccccccccCCCCCc
Confidence 99999999999999999996688999865443 33444555667777885433211000000 0 00000000000000
Q ss_pred --cc--cc--chhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHH
Q 009816 284 --PL--LR--RETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDV 357 (524)
Q Consensus 284 --~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 357 (524)
.. .+ .....+.....++...+||.+....+...+....++...++.-..-.+. .+-.+..-|.+-++..+
T Consensus 234 ~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~~g~~qv~~Y~Q~LW~~v----~~~~~~yNG~veA~~tl 309 (511)
T TIGR00806 234 GKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFNSAGYYLITYYVHTLWGTL----DESLNKYNGAVDAASTL 309 (511)
T ss_pred cccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHHhhHHHHHHHHHHHHHHHc----CCCccccCCHHHHHHHH
Confidence 00 00 0011122344566778899998888888888777777776666555554 12112245666677777
Q ss_pred HHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccC
Q 009816 358 GGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSL 437 (524)
Q Consensus 358 ~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 437 (524)
.+.+..+..|++-.++.+--.+.++.....-+.+++. ....++.|...+..++++..+....+.....++..+.
T Consensus 310 lga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~-m~~t~~Iw~~Y~~yvlf~~~y~flitia~~~iA~~L~----- 383 (511)
T TIGR00806 310 LGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFW-MSQSHDIWVLYVTYVLFRGIYQFLVPIATFQIASSLS----- 383 (511)
T ss_pred HHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhh-hhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----
Confidence 7788888999986665332233333222222222222 2335688888889999988888887777777777765
Q ss_pred CCCccchhHHHHHHHhhhhhhhhhhhhh
Q 009816 438 KGNSRALATVTAIIDGTGSVGAAIGPLL 465 (524)
Q Consensus 438 ~~~~~~~g~~~g~~~~~~~~g~~i~~~~ 465 (524)
.+..|...|+++++..+-..+-..+
T Consensus 384 ---~~~~aLvFGiNtfvAl~LQtilT~i 408 (511)
T TIGR00806 384 ---KELCALVFGINTFVATALKTIITAV 408 (511)
T ss_pred ---ccceEEEEecHHHHHHHHHHheEEE
Confidence 3556888888887765555444433
No 82
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.96 E-value=3.3e-27 Score=217.11 Aligned_cols=358 Identities=15% Similarity=0.166 Sum_probs=285.0
Q ss_pred HHHHHHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhhHhHHHHH
Q 009816 39 VLIVTFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTALLGELDLA 118 (524)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~s~ 118 (524)
.++.+...++...+......+++|.+++. |+++. .|.+++..+
T Consensus 14 ~~v~~t~lFfl~G~~~~l~diLip~l~~~------------------------------f~ls~-------~~a~liqfa 56 (422)
T COG0738 14 AFVLLTSLFFLWGFITCLNDILIPHLKEV------------------------------FDLTY-------FEASLIQFA 56 (422)
T ss_pred HHHHHHHHHHHHHHHhhcchhhHHHHHHH------------------------------hCccH-------HHHHHHHHH
Confidence 34455555666777778888899999888 77777 999999999
Q ss_pred HHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHHHHhhccc
Q 009816 119 FLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVAVVGNWFG 198 (524)
Q Consensus 119 ~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~ 198 (524)
++.+|.+.+++.|++.+|+|+|+.+++++.+++++..++.=+ ....++..++++-++.|.|.+...+++..+++...+
T Consensus 57 ff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pA--a~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~ 134 (422)
T COG0738 57 FFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPA--ASSKSYGFFLVALFILASGIGLLETAANPYVTLLGK 134 (422)
T ss_pred HHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhh--hhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCC
Confidence 999999999999999999999999999999999999998522 114889999999999999999999999999999999
Q ss_pred cccccceehhhhhhhhhHHHHHHHHHHHhhh-------------------c-CchhHHHHhHHHHHHHHHHHHHhcCCCC
Q 009816 199 KSKRGLIMGIWNAHTSIGNITGSLVASALLT-------------------Y-GWGWSFVVPGLIIAFVGLIVFLFLPVNP 258 (524)
Q Consensus 199 ~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~-------------------~-gwr~~f~~~~~~~~~~~~~~~~~~~~~~ 258 (524)
+++..+.+++.+..+++|.+++|++++.+.. . .|+++|...+...+++.+..... +.|
T Consensus 135 ~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~--k~p 212 (422)
T COG0738 135 PESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLS--KLP 212 (422)
T ss_pred chhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhc--cCC
Confidence 9889999999999999999999999987753 1 38888888877766664443322 112
Q ss_pred CCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 009816 259 ESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAV 338 (524)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (524)
..+...+++. +++.....+++++|+++...++.+++.........|++.|+.+.
T Consensus 213 ~~~~~~~~~~------------------------~~~~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~-- 266 (422)
T COG0738 213 DLQVAAPSLG------------------------ASGSAGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEEL-- 266 (422)
T ss_pred cCCccccccc------------------------ccccchHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhc--
Confidence 2111111000 00011356889999999999999999999999999999999996
Q ss_pred CCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhh
Q 009816 339 DGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNG 418 (524)
Q Consensus 339 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 418 (524)
.|.+..+++...+.+.++.++|++++.++..|+...|.+....+...+.++..... .+ .+.+...++.|++.+.
T Consensus 267 --~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~---~g-~v~~~~l~~ig~F~si 340 (422)
T COG0738 267 --LGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALI---GG-VVALYALFLIGLFNSI 340 (422)
T ss_pred --CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHh---cC-hHHHHHHHHHHHHhHH
Confidence 69999999999999999999999999999999999998877665555444444332 22 4556677888999999
Q ss_pred hhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-ChhHHHH
Q 009816 419 PYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-SWTAVFT 479 (524)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~~~ 479 (524)
.+|.+.+...+.++.+. ...|....+..+|+++-|++.|++.|. +....+.
T Consensus 341 mfPTIfslal~~l~~~t----------s~~s~~l~maivGGAiiP~l~G~i~d~~g~~~~~~ 392 (422)
T COG0738 341 MFPTIFSLALKNLGEHT----------SVGSGLLVMAIVGGAIIPPLQGVIADMFGIQLTFL 392 (422)
T ss_pred HHHHHHHHHHhccCccc----------cccceeeeeheecchHHHHHHHHHHHhhhhHHHHH
Confidence 99999999999988432 222334455678999999999999998 5555554
No 83
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.96 E-value=5e-27 Score=232.21 Aligned_cols=355 Identities=13% Similarity=0.049 Sum_probs=244.8
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHh---ccccccchhHHHHHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYG---IGYWGNVHSFYYYLVV 174 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~---~a~~~~~~~~~~~~~~ 174 (524)
+|+++ .+.|++.+.+.++..++++++|+++||+|||+.++.+.+..+++..... +......+.+..+++.
T Consensus 33 ~g~s~-------~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (396)
T TIGR00882 33 NGLSK-------TDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVG 105 (396)
T ss_pred cCCCH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 67776 9999999999999999999999999999999999887766655443221 1100000233445677
Q ss_pred HHHHHHhhhcchhhHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhhhcCchhHHHHhHHHHHHHHHHHHHhc
Q 009816 175 QMLAGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALLTYGWGWSFVVPGLIIAFVGLIVFLFL 254 (524)
Q Consensus 175 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~gwr~~f~~~~~~~~~~~~~~~~~~ 254 (524)
+++.|++.+...+....+..+.. ++++..++......++|.++||++++.+.+++||.+|++.+++.++..++.+...
T Consensus 106 ~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~f~~~~~~~~~~~~~~~~~~ 183 (396)
T TIGR00882 106 GLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFSIDPQIVFWLGSGFALILMLLLMFAK 183 (396)
T ss_pred HHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhccCchHHHHHHHHHHHHHHHHHHHhC
Confidence 88999998888888888777753 3345677888888899999999999988888999999998888887765554444
Q ss_pred CCCCCCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009816 255 PVNPESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVS 334 (524)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (524)
||.|+++.. + + ..+ .+ +.+++..+.++.+|+|.++...+..++....+.....+.+.|++
T Consensus 184 ~~~~~~~~~-~-~--~~~-----~~-----------~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~ 243 (396)
T TIGR00882 184 PKAPSSATV-A-N--ALG-----AN-----------ASAFSLKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFT 243 (396)
T ss_pred CCCchhhhh-h-c--ccc-----cc-----------cCCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 443321100 0 0 000 00 00011234577889999887766666655555566667888887
Q ss_pred hcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHh
Q 009816 335 HTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGM 414 (524)
Q Consensus 335 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 414 (524)
+...+ .+.+....+...+...+...++.+..+++.||+++|+.+.++..+.++....... ..+.+..+...++.|+
T Consensus 244 ~~~~~-~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~---~~~~~~~~~~~~l~g~ 319 (396)
T TIGR00882 244 SFFAT-PQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSF---ATTALEVVILKMLHAF 319 (396)
T ss_pred Hhccc-cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHh---cCChHHHHHHHHHHHH
Confidence 75210 2455667788888888888999999999999999999888877766665544332 2344555555566665
Q ss_pred hhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHH-HHhhhhhhhhhhhhhhHhhccc-ChhHHHHHHHHHHHHHHHHH
Q 009816 415 FVNGPYALITTAVSADLGTHSSLKGNSRALATVTAI-IDGTGSVGAAIGPLLTGYISAT-SWTAVFTMLMAAALISGLLL 492 (524)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~-~~~~~~~g~~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~ 492 (524)
+.............+..+ ++.+++..+. .+....+|+++++.+.|++.|. ||+.+|.+.+++.++..++.
T Consensus 320 ~~~~~~~~~~~~~~~~~~--------~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~ 391 (396)
T TIGR00882 320 EVPFLLVGCFKYITSQFD--------VRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLIS 391 (396)
T ss_pred HHHHHHHHHHHHHHHhCC--------cceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 543333333333333333 3445555554 5678899999999999999998 99999999888877666554
Q ss_pred H
Q 009816 493 T 493 (524)
Q Consensus 493 ~ 493 (524)
.
T Consensus 392 ~ 392 (396)
T TIGR00882 392 V 392 (396)
T ss_pred H
Confidence 3
No 84
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.96 E-value=5.9e-28 Score=217.17 Aligned_cols=414 Identities=16% Similarity=0.168 Sum_probs=290.6
Q ss_pred ccccchhhHHHHHHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchh
Q 009816 31 SFKNHQAIVLIVTFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTA 110 (524)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 110 (524)
.+.+.+|...+....+++...+.....+.+.|.+... .|.+. .
T Consensus 71 gfgrfq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~------------------------------w~~s~-------~ 113 (528)
T KOG0253|consen 71 GFGRFQWYLFFVAGMGWMADAMEMMLLSLILPALDEV------------------------------WGPSE-------G 113 (528)
T ss_pred CcccchhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhh------------------------------hchhh-------h
Confidence 4678899999999999999999988888888888777 66666 8
Q ss_pred hHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHH
Q 009816 111 LLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVV 190 (524)
Q Consensus 111 ~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~ 190 (524)
|..++......+..+++..||..+|++|||+.+.+..+...+...+.+.+ +|+..+++.|.+.|+|.|+ .|...
T Consensus 114 q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~s-----pnf~~L~~f~~l~~~g~gg-~pv~~ 187 (528)
T KOG0253|consen 114 QAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGAS-----PNFASLCVFRALWGFGVGG-LPVDS 187 (528)
T ss_pred hhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCC-----CCeehhhHHHHHHhccCCC-ccHhH
Confidence 99999999999999999999999999999999999999999999999997 9999999999999999998 78888
Q ss_pred HHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCcccc
Q 009816 191 AVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNEED 269 (524)
Q Consensus 191 ~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (524)
++-.|..|..+|...+-.. ..+.+|.++...+...+. .+||||.....+....+ .....+++||+|+....+.++++
T Consensus 188 ~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~-~a~f~~w~~ESpRf~~~~G~~~k 265 (528)
T KOG0253|consen 188 AIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMF-AARFLVWVYESPRFYLAKGDDYK 265 (528)
T ss_pred HHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHH-HHHHHhhcccCcchhhhcCChHH
Confidence 8999999998888877666 999999999999988777 78999988777754444 45677889999998766666555
Q ss_pred ccCCcccc----CCCccc---------ccccch-------h-hhhhhhhhHHHHhcCCCc----HHHHHHHHHHHHHHHH
Q 009816 270 ESLSPKKI----GEGVTQ---------PLLRRE-------T-KIEEKAVGFIEAWKIPGV----APFALCLFFAKLVAYT 324 (524)
Q Consensus 270 ~~~~~~~~----~~~~~~---------~~~~~~-------~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 324 (524)
+....++. +.+... ...+++ . ..++...+...++ .|.+ ..+....+...+.+++
T Consensus 266 AletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLl-sp~lrkttlllw~iwfgnafsyyg 344 (528)
T KOG0253|consen 266 ALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLL-SPKLRKTTLLLWRIWFGNAFSYYG 344 (528)
T ss_pred HHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhc-ChHHHHHHHHHHHHHHhhHHHHHH
Confidence 42211110 000000 000000 0 0011112222222 2222 2222333344444444
Q ss_pred HHHHHHHHHhhccc-CC------------C--CCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHH
Q 009816 325 FLYWLPFYVSHTAV-DG------------K--YLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIP 389 (524)
Q Consensus 325 ~~~~~~~~~~~~~~-~~------------~--g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 389 (524)
.........+.-.. +. . ..+...--.=..+..+....|.++.+++.||+|||+.+...++++.+.
T Consensus 345 ~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRKkTMal~l~~f~if 424 (528)
T KOG0253|consen 345 SVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIF 424 (528)
T ss_pred HHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHH
Confidence 43333222221100 00 0 001000001134556778899999999999999999999999888887
Q ss_pred HHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhh
Q 009816 390 ALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYI 469 (524)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l 469 (524)
.+.+... .+.....+..+...++..+.+...+.+.++.+|+ ..|+++.|....+..+|+++.|.++ ..
T Consensus 425 lfll~~c---~~rn~~tvllf~arafisg~fqvaYvYtPEVyPT--------avRatgvGtcSsmaRIggI~~p~iA-~~ 492 (528)
T KOG0253|consen 425 LFLLTTC---KTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPT--------AVRATGVGTCSSMARIGGIFSPVIA-MR 492 (528)
T ss_pred HHHHHHh---cCcchhHHHHHHHHHHHhchheEEEEecCcccch--------hhhhcchhhhhhHHhhhhhhhhHHH-HH
Confidence 7666542 2223345556667778888888889999999986 6679999999999999999999998 44
Q ss_pred cccChhHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 009816 470 SATSWTAVFTMLMAAALISGLLLTRLVVAEVAAK 503 (524)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (524)
.+.+-..+..+.+++++++.+..++ .+-|+|.|
T Consensus 493 ~e~s~sl~i~vy~~~~ilagIavcf-fPiEtkGR 525 (528)
T KOG0253|consen 493 AELSTSLPIFVYGALFILAGIAVCF-FPIETKGR 525 (528)
T ss_pred hccceeehHHHHHHHHHHHHHHhee-eeeccCCC
Confidence 4444555556666666666665553 44555554
No 85
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.96 E-value=1.9e-26 Score=231.53 Aligned_cols=338 Identities=17% Similarity=0.173 Sum_probs=248.0
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhccccc----CCchh-hHHHHHHHHHHHHHHHhccccc-cchhHHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGDR----LDLRI-FLTVGMVGTGLFTSLYGIGYWG-NVHSFYYY 171 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr----~Grr~-~l~~~~~~~~~~~~~~~~a~~~-~~~~~~~~ 171 (524)
+|+++ .+.|++.++..+..++..|+.|+++|| +|||| .++.+.+..+++.+++...... ....+..+
T Consensus 30 ~g~s~-------~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 102 (437)
T TIGR00792 30 LGLSA-------AFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYA 102 (437)
T ss_pred cCCCH-------HHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHH
Confidence 78887 999999999999999999999999998 67754 6777888888887777664110 01235677
Q ss_pred HHHHHHHHHhhhcchhhHHHHHhhcc-ccccccceehhhhhhhhhHHHHHHHHHHHhh--------hcCchhHHHHhHHH
Q 009816 172 LVVQMLAGLFQSTGWPSVVAVVGNWF-GKSKRGLIMGIWNAHTSIGNITGSLVASALL--------TYGWGWSFVVPGLI 242 (524)
Q Consensus 172 ~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~--------~~gwr~~f~~~~~~ 242 (524)
++.+++.+++.+...++..++..|.. ++++|++..++.+.+..+|..+++.+.+.+. ..+||+.+.+.+++
T Consensus 103 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l 182 (437)
T TIGR00792 103 YITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALI 182 (437)
T ss_pred HHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHH
Confidence 88889999998888888888889987 4688999999999888888877766554443 24899999999988
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHH
Q 009816 243 IAFVGLIVFLFLPVNPESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVA 322 (524)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (524)
.++..++.++..||++++....+ + + ..+....++.++++|.++...+..++.....
T Consensus 183 ~~~~~~~~~~~~~e~~~~~~~~~---~-------~--------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (437)
T TIGR00792 183 GVVSLIICFFGTKERYSEIPKNI---E-------K--------------KLSLKQIFKALFKNDQLLILCLAYLFYNLAF 238 (437)
T ss_pred HHHHHHHHHcCCEecCCCCCccc---c-------c--------------CCCHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 88877766677776542110000 0 0 0001234567788999888877777777766
Q ss_pred HHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhH
Q 009816 323 YTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSL 402 (524)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (524)
.....+.+.|.++. .+ ++...+.+.....++.+++.++.+++.||+++|+.+..+..+..++.+.+... ..+.
T Consensus 239 ~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~--~~~~ 311 (437)
T TIGR00792 239 NIKNGVQVYYFTYV----LG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFA--GSNL 311 (437)
T ss_pred HHHcchhheeEeee----cC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc--chhH
Confidence 66666666666655 45 45566777777889999999999999999999999888877666655544332 2344
Q ss_pred HHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-Ch
Q 009816 403 ALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-SW 474 (524)
Q Consensus 403 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~ 474 (524)
+...+..++.|++.+...+...+..++..+.. +.+..++.+|++.|+.+.+..+|..+++.+.|++.+. ||
T Consensus 312 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 312 PLILVLIILAGFGQNFVTGLVWALVADTVDYG-EWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh-hhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 45555666777877777777777777665532 2223346679999999999999999999999999875 44
No 86
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.95 E-value=4.9e-26 Score=221.98 Aligned_cols=311 Identities=14% Similarity=0.073 Sum_probs=231.0
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhcccccC-----Cchhh-HHHHHHHHHHHHHHHhccccccchhHHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGDRL-----DLRIF-LTVGMVGTGLFTSLYGIGYWGNVHSFYYY 171 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-----Grr~~-l~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 171 (524)
+|++. +++|+..+. .+...+ .+++|+++||+ ||||. ++.+.++.++..++.++. .+..+++.+
T Consensus 18 ~g~s~-------~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~--~~~~~l~~l 86 (356)
T TIGR00901 18 KNVSL-------KTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFL--VPSTDLPLL 86 (356)
T ss_pred cCCCH-------HHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcC--CcchhHHHH
Confidence 78887 999998655 555555 99999999998 89886 567777777776666664 123567777
Q ss_pred HHHHHHHHHhhhcchhhHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhh-hcC--------chhHHHHhHHH
Q 009816 172 LVVQMLAGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL-TYG--------WGWSFVVPGLI 242 (524)
Q Consensus 172 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~g--------wr~~f~~~~~~ 242 (524)
....++.+++.+...++..+++.|++|+|+|+++.++...+..+|.++++.+++.+. ..+ ||.+|++.+++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~ 166 (356)
T TIGR00901 87 AGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALL 166 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHH
Confidence 888888898888889999999999999999999999999999999999999998887 567 99999998887
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCC---cHHHHHHHHHHH
Q 009816 243 IAFVGLIVFLFLPVNPESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPG---VAPFALCLFFAK 319 (524)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 319 (524)
.++..+..++..||+++..+. + + + +.++....+++++++|. ++...+..++..
T Consensus 167 ~l~~~~~~~~~~~e~~~~~~~-~---~------------------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (356)
T TIGR00901 167 ILPGLLVTLFLAKEPQEDASV-P---K------------------P--LTQAVLKPIREFFQRKNMIQALLLLLLIVLYK 222 (356)
T ss_pred HHHHHHHHHHhccCCCccccc-c---h------------------h--HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Confidence 766544444445553221100 0 0 0 00011234556677775 666666666667
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHH-HHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhc
Q 009816 320 LVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFD-VGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYG 398 (524)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (524)
........++|.|+++ +|+++.+.+.+....+ ++.+++.++.|++.||+++|+.+..+.++.++..........
T Consensus 223 ~~~~~~~~~~~~~l~~-----~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~ 297 (356)
T TIGR00901 223 LGDSAATVLTTLFLLD-----MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLAS 297 (356)
T ss_pred HHHHHHHHHHHHHHHH-----cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7777888999999987 4999999998887666 577899999999999999999887777766655444332211
Q ss_pred c--------hhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhh
Q 009816 399 H--------LSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGS 456 (524)
Q Consensus 399 ~--------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 456 (524)
. .+.+......++.+++.+...+...+...+..|+ +.+|+..|+.+...+
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~--------~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 298 NGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNP--------KFGATQMALLSSLSA 355 (356)
T ss_pred cCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCC--------CccHHHHHHHHHHHh
Confidence 1 2334455566677888888889999999998884 677999998877654
No 87
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.95 E-value=2.2e-25 Score=223.69 Aligned_cols=376 Identities=11% Similarity=0.074 Sum_probs=247.0
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhccccc-CCchhhHHHHHHHHHHHHHHHhccccccchh-HHHHHHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGDR-LDLRIFLTVGMVGTGLFTSLYGIGYWGNVHS-FYYYLVVQ 175 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr-~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~-~~~~~~~r 175 (524)
+|++. ++.+++.+.+.....+..+++|+++|| +||||+++++.++++++.++++++ .+ ...+++.|
T Consensus 45 lg~~~-------~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~-----~~~~~ll~~~~ 112 (489)
T PRK10207 45 LGFSQ-------EQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMS-----LLKPDLIFIAL 112 (489)
T ss_pred cCCCH-------HHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHh-----ccchhHHHHHH
Confidence 77776 888999999998888889999999999 999999999999999999999986 44 33456899
Q ss_pred HHHHHhhhcchhhHHHHHhhccccc--cccceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHH
Q 009816 176 MLAGLFQSTGWPSVVAVVGNWFGKS--KRGLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFL 252 (524)
Q Consensus 176 ~l~G~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~ 252 (524)
+++|+|.|...|...+++.|.+|++ +|++++++++.+.++|..+||.+++++. ++|||+.|++.++ +++.+++.+.
T Consensus 113 ~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i-~~~~~~~~~~ 191 (489)
T PRK10207 113 GTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGA-GLIIALLVYF 191 (489)
T ss_pred HHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHH-HHHHHHHHHH
Confidence 9999999999999999999999877 4578999999999999999999999998 6799999999544 5555555555
Q ss_pred hcCCCCCCCCCCCccccccCCcccc---------------CCCcccccccchh---------hhhhhhhhHHHHhcCCCc
Q 009816 253 FLPVNPESVGTDTNEEDESLSPKKI---------------GEGVTQPLLRRET---------KIEEKAVGFIEAWKIPGV 308 (524)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~ 308 (524)
..++..++...++++++ .+..... ....... ..... ..........+..|+|.+
T Consensus 192 ~~~~~~~~~~~~~~~~~-~d~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~f~~~~~~~~~~~r~r~~ 269 (489)
T PRK10207 192 ACRGMVKDIGSEPDHKP-MSFSKLLLVLLGSVVMIFVCAWLMHNVEV-ANLVLIVLSIVVTIIFFREAFKLDKTGRNKMF 269 (489)
T ss_pred HcchhhcccCCCCCccc-hhhhhHHHHHHHHHHHHHHHHHHHhhhhH-HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 55533222110110000 0000000 0000000 00000 000000000134444443
Q ss_pred HHHHHH--HHHHHHHHHHHHHHHHHHHhhccc-CCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhH-------H
Q 009816 309 APFALC--LFFAKLVAYTFLYWLPFYVSHTAV-DGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARA-------I 378 (524)
Q Consensus 309 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~-------~ 378 (524)
....+. ..+.+..+....+.++.+.++... +..|+.. ....+.....+..++..++.+++.||+++|+ .
T Consensus 270 ~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i-~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k 348 (489)
T PRK10207 270 VAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSI-NPVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMK 348 (489)
T ss_pred HHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEE-CHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHH
Confidence 332222 333444455555778888875310 0012111 2233444455667678888899999999886 3
Q ss_pred HHHHHHHHHHHHHHHH----Hhh---cchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHH
Q 009816 379 TAASFMYCAIPALFFY----RSY---GHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAII 451 (524)
Q Consensus 379 ~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 451 (524)
+.++.++.+++.+.+. ... ...+.++.+...++.|++.....++....+.+..| ++.+|.++|+.
T Consensus 349 ~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP--------~~~~g~~~g~~ 420 (489)
T PRK10207 349 FTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVP--------QHLMGFILGMW 420 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCh--------HHHHHHHHHHH
Confidence 5566666555543321 111 12346667778888999999999998999988887 47789999999
Q ss_pred HhhhhhhhhhhhhhhHhhcc----------c-ChhHHHHHHHHHHHHHHHHHHHHHH
Q 009816 452 DGTGSVGAAIGPLLTGYISA----------T-SWTAVFTMLMAAALISGLLLTRLVV 497 (524)
Q Consensus 452 ~~~~~~g~~i~~~~~g~l~~----------~-~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (524)
+...++|+.++..+...... . .+...|...++..+++.++.....+
T Consensus 421 ~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~ 477 (489)
T PRK10207 421 FLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMALMVP 477 (489)
T ss_pred HHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888765521 1 2566777777766666665554433
No 88
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.95 E-value=8.1e-25 Score=215.99 Aligned_cols=372 Identities=14% Similarity=0.052 Sum_probs=255.9
Q ss_pred HHHHHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhhHhHH--HH
Q 009816 40 LIVTFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTALLGEL--DL 117 (524)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~--~s 117 (524)
+..++..|+.+........+..|...++ .|.+. +++|++ .+
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~------------------------------~g~~~-------~~iGl~~~~~ 45 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLRE------------------------------DGAPL-------TALAFLPLVG 45 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHH------------------------------cCCCH-------HHHHHHHHHH
Confidence 4455556666666666666677777677 77777 999997 46
Q ss_pred HHHHHHHhhhhhh-hcccccCCchhhHHHHHHHH-HHHHHHHh-ccccccchhHHHHHHHHHHHHHhhhcchhhHHHHHh
Q 009816 118 AFLSIYAGGMFFS-GHLGDRLDLRIFLTVGMVGT-GLFTSLYG-IGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVAVVG 194 (524)
Q Consensus 118 ~~~l~~~~~~~~~-G~l~Dr~Grr~~l~~~~~~~-~~~~~~~~-~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~ 194 (524)
...+...+.++++ ++..||+||||..++.+.+. +......+ +. .......+++..-++.++..+...+...++..
T Consensus 46 l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~ 123 (390)
T TIGR02718 46 LPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVG--PDVAGAGWAVGLLACASLASATQDIATDGMAA 123 (390)
T ss_pred HHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcCC--cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6677777888888 55799999999876555332 22222222 21 00122334455556666777778888888888
Q ss_pred hccccccccceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCccccccCC
Q 009816 195 NWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNEEDESLS 273 (524)
Q Consensus 195 ~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (524)
|..++++++...+....+..+|.++|+.+.+++. ++|||.+|++.+++.++..+..++..|+++++. + + +
T Consensus 124 ~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~~~~~~~~~-~-~-~------ 194 (390)
T TIGR02718 124 EHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWLKDRAVASP-E-A-P------ 194 (390)
T ss_pred HhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCCCcCcc-c-c-c------
Confidence 9888888888888888888999999998887777 679999999999887776555444333322110 0 0 0
Q ss_pred ccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHH
Q 009816 274 PKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLST 353 (524)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 353 (524)
+++..++++.+|+|.++......++..........+.+.|+++ .|+++++.+.+..
T Consensus 195 -------------------~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-----~G~s~~~ig~~~~ 250 (390)
T TIGR02718 195 -------------------LARRASLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVD-----AGWPLEWIGRLGM 250 (390)
T ss_pred -------------------hhhHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHh-----cCCCHHHHHHHHh
Confidence 0012235678899998888877777777777788889999988 4999999999888
Q ss_pred HHHH-HHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhc---chhHHHHHHHHHHHHhhhhhhhHHHHHHHHh
Q 009816 354 LFDV-GGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYG---HLSLALNIALMFITGMFVNGPYALITTAVSA 429 (524)
Q Consensus 354 ~~~~-~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 429 (524)
..++ ..+++.++.|++.||+++|+.+..+..+.....+....... ..+.........+.++..+...+.......+
T Consensus 251 ~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 330 (390)
T TIGR02718 251 AGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMR 330 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7764 66677899999999999999887766554332222221110 1122222333334445556666666666666
Q ss_pred hhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-ChhHHHHHHHHHHHHHHH
Q 009816 430 DLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-SWTAVFTMLMAAALISGL 490 (524)
Q Consensus 430 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~ 490 (524)
..++ ++.+++..++.+...++|..++|.+.|++.|. |++..|...+++.+++.+
T Consensus 331 ~~~~-------~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 331 FAGD-------GDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HhCc-------ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 5542 26679999999999999999999999999998 888888887766665443
No 89
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.95 E-value=4.9e-27 Score=238.92 Aligned_cols=380 Identities=17% Similarity=0.168 Sum_probs=257.7
Q ss_pred hhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhH
Q 009816 110 ALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSV 189 (524)
Q Consensus 110 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~ 189 (524)
.+.+|+.+.+.++..+++++.|+++|++|||+.++++.+++.++.+++++| +|+.+++++|+++|+|.|......
T Consensus 89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a-----~~~~~l~~GR~l~G~g~G~~~~~~ 163 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALA-----PSWYQLIVGRILTGLGVGGASVLA 163 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-----hhHHHHHHHHHHhccchhhhhhcc
Confidence 466999999999999999999999999999999999999999999999998 899999999999999999999999
Q ss_pred HHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhhh--cCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCcc
Q 009816 190 VAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALLT--YGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNE 267 (524)
Q Consensus 190 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~--~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (524)
..+++|..|++.||...+..+....+|..++..++....+ ++||..+.+..+.+++..+. .+++||+|++..+..+.
T Consensus 164 piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~g~~ 242 (513)
T KOG0254|consen 164 PVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPESPRWLIEKGRL 242 (513)
T ss_pred hhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCChHHHHHcCCh
Confidence 9999999999999999999999999999999777766654 48999999988888877666 88999999987654443
Q ss_pred ccccCCccccCC----Ccccc--cccch--hhh--hhhhhhHHHHhcCCCcHH-----HHHHHHHHHHHHHHHHHHHHHH
Q 009816 268 EDESLSPKKIGE----GVTQP--LLRRE--TKI--EEKAVGFIEAWKIPGVAP-----FALCLFFAKLVAYTFLYWLPFY 332 (524)
Q Consensus 268 ~~~~~~~~~~~~----~~~~~--~~~~~--~~~--~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 332 (524)
++.......... +.... ..+.+ .+. .+....+.++++ |..+. ..+..+..........++.+.+
T Consensus 243 ~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~i 321 (513)
T KOG0254|consen 243 EEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFS-PKVRKRLIIGLLLQLFQQLTGINYVFYYSTTI 321 (513)
T ss_pred HHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcC-cchHHHHHHHHHHHHHHHHhCCceEEeehHHH
Confidence 333211111000 00000 00000 000 001111333333 32222 2222222333334445667777
Q ss_pred HhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcch---------hHH
Q 009816 333 VSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHL---------SLA 403 (524)
Q Consensus 333 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 403 (524)
++.. |.+... .....+.++..+++.+++.++.||+|||+.++.+...+.++.+++....... ..+
T Consensus 322 f~~~-----g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (513)
T KOG0254|consen 322 FKSA-----GLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGW 395 (513)
T ss_pred HHhc-----CCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhH
Confidence 7664 555433 4555667777888888889999999999999999888888777665432111 122
Q ss_pred HHHHHHHHHHhhhhhhhHHHHH-HHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-ChhHHHHHH
Q 009816 404 LNIALMFITGMFVNGPYALITT-AVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-SWTAVFTML 481 (524)
Q Consensus 404 ~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~~~~~ 481 (524)
..++..+++-..++....+... ...|.+| .+.|+.+.++....+.+...+-......+.+. +....|...
T Consensus 396 ~~~~~~~~~v~~f~~g~g~v~w~~~sEifp--------~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f 467 (513)
T KOG0254|consen 396 LAIVFLCLFIFSFAIGWGPVPWVIVSEIFP--------LRLRSKGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYF 467 (513)
T ss_pred HHHHHHHHHHHHHhcccccchhhhhhccCc--------HhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHH
Confidence 2333333333333333444444 5566666 47778888888888777666555444444433 335566666
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhccccc
Q 009816 482 MAAALISGLLLTRLVVAEVAAKFVESRSQ 510 (524)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (524)
++++.+......++..+|+|++..++.++
T Consensus 468 ~~~~~~~~~~fv~~~~pETkg~sleei~~ 496 (513)
T KOG0254|consen 468 GGICLLSLIIFVFFFVPETKGLTLEEINE 496 (513)
T ss_pred HHHHHHHHHHHheEEcccCCCCcHHHHHH
Confidence 66666665534556678888887776543
No 90
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.95 E-value=3.7e-28 Score=225.43 Aligned_cols=432 Identities=16% Similarity=0.145 Sum_probs=290.5
Q ss_pred cccchhhHHHHHHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhh
Q 009816 32 FKNHQAIVLIVTFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTAL 111 (524)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 111 (524)
..+++...+.+...+++.+..|...++.+.+.+... |+.+... ..+.....
T Consensus 35 ~qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~l--------------Y~~~~~~---------------~g~~ps~i 85 (538)
T KOG0252|consen 35 LQWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYL--------------YYHGDES---------------GGHYPSGV 85 (538)
T ss_pred hhHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHH--------------hcCCCCC---------------CCcCCchH
Confidence 345666777888889999999999999987766544 3333111 11122366
Q ss_pred HhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccc--hhHHHHHHHHHHHHHhhhcchhhH
Q 009816 112 LGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNV--HSFYYYLVVQMLAGLFQSTGWPSV 189 (524)
Q Consensus 112 ~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~--~~~~~~~~~r~l~G~~~~~~~~~~ 189 (524)
.+.+..+-.+|..+|+++.|+++||+|||+++...++++.+++++++++..... .-..++...|++.|+|.|+-+|.+
T Consensus 86 ~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlS 165 (538)
T KOG0252|consen 86 LALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLS 165 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcch
Confidence 788899999999999999999999999999999999999999998887633222 346788999999999999999999
Q ss_pred HHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhhh-----c-----------CchhHHHHhHHHHHHHHHHHHHh
Q 009816 190 VAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALLT-----Y-----------GWGWSFVVPGLIIAFVGLIVFLF 253 (524)
Q Consensus 190 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~-----~-----------gwr~~f~~~~~~~~~~~~~~~~~ 253 (524)
.++.+|...++.||...+...+..+.|...|.+++-.+.. + =||..|.+.+++++++ +...+.
T Consensus 166 AtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~-ly~Rl~ 244 (538)
T KOG0252|consen 166 ATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLV-LYFRLK 244 (538)
T ss_pred HHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHH-HHhhhc
Confidence 9999999999999999999888888888888777655531 1 2999998866655544 666777
Q ss_pred cCCCCCCCCCCCccccc-cCCcccc-CCCccccc-ccc-hhhhhhhhhhHHHHhc---CCCcHHHHHHHHHHHHHHHHHH
Q 009816 254 LPVNPESVGTDTNEEDE-SLSPKKI-GEGVTQPL-LRR-ETKIEEKAVGFIEAWK---IPGVAPFALCLFFAKLVAYTFL 326 (524)
Q Consensus 254 ~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~-~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 326 (524)
+||+++......++.+. ....++. ....+... .+. ....++....+.+.+. -++....+...|+.-.+++...
T Consensus 245 M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~n 324 (538)
T KOG0252|consen 245 MPETARYTALVSKKLKQAAGDMKKVLSVDIEAESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQN 324 (538)
T ss_pred CCcchhHHHHhhcCHhhhhhccccccccccchhhccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccc
Confidence 89887665221111000 0000000 00000000 000 0001111111222222 2344455666777777788887
Q ss_pred HHHHHHHhhcccCCCCCChhhhhh--------HHHHH-HHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhh
Q 009816 327 YWLPFYVSHTAVDGKYLSSEMAGN--------LSTLF-DVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSY 397 (524)
Q Consensus 327 ~~~~~~~~~~~~~~~g~~~~~~~~--------~~~~~-~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (524)
.+....++.. |+.+..... ...+. ..+.+.|..+...++|++||++..+.++.++.+..+++...+
T Consensus 325 L~~s~I~~~i-----g~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y 399 (538)
T KOG0252|consen 325 LFQSVIFSAI-----GVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPY 399 (538)
T ss_pred cHHHHHHHhh-----ccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCc
Confidence 8888887764 444433322 11222 233344666677889999999999999999988887776543
Q ss_pred c-chhHHHHHHHHHHHHh-hhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhcc----
Q 009816 398 G-HLSLALNIALMFITGM-FVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISA---- 471 (524)
Q Consensus 398 ~-~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~---- 471 (524)
. ..+....+++..+..+ +..+....+....++.+| .+.|+++.|+..+.+-.|++++.....++.+
T Consensus 400 ~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FP--------arvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp 471 (538)
T KOG0252|consen 400 NQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFP--------ARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYP 471 (538)
T ss_pred ccccccCceeehHHHHHHHHhcCCCceeEEeehhhch--------HHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCC
Confidence 3 1122222233322222 223334444455566666 4889999999999999999999999999998
Q ss_pred -c-ChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccc
Q 009816 472 -T-SWTAVFTMLMAAALISGLLLTRLVVAEVAAKFVESR 508 (524)
Q Consensus 472 -~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (524)
. +.+.++++.+++++++.+..+++ +|++++..++.
T Consensus 472 ~~~g~~~v~~i~~~~~~~gi~~T~l~--pEtk~~~leei 508 (538)
T KOG0252|consen 472 PNIGVRNVFIILAGCMLLGILFTLLI--PETKGKSLEEI 508 (538)
T ss_pred ccccchHHHHHHHHHHHHhHheeEEe--ecccccCHHHh
Confidence 4 88899999999988877766543 48887776655
No 91
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.95 E-value=2.6e-26 Score=208.14 Aligned_cols=342 Identities=18% Similarity=0.212 Sum_probs=221.8
Q ss_pred hhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhH
Q 009816 110 ALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSV 189 (524)
Q Consensus 110 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~ 189 (524)
.-.|.+.+.|+++..+.++.+|.++||+|||.++++|++..++..++.+.+ +|+..+.++|++.|+..|-. ...
T Consensus 68 ~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S-----~~F~afv~aR~l~Gi~kgnl-~v~ 141 (451)
T KOG2615|consen 68 FYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALS-----RNFAAFVLARFLGGIFKGNL-SVI 141 (451)
T ss_pred hhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHhhhhccCch-HHH
Confidence 667999999999999999999999999999999999999999999999997 99977777799999998754 677
Q ss_pred HHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhhhc---CchhHHHHhHHHHHHH----HHHHHHhcCCCCCCCC
Q 009816 190 VAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALLTY---GWGWSFVVPGLIIAFV----GLIVFLFLPVNPESVG 262 (524)
Q Consensus 190 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~---gwr~~f~~~~~~~~~~----~~~~~~~~~~~~~~~~ 262 (524)
.++++|.+++|+|+++++.+...+++|.++||.+|+++..+ .=+.+|...+.+..+. .....+++||+-+.+.
T Consensus 142 rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~rk 221 (451)
T KOG2615|consen 142 RAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETLPLRK 221 (451)
T ss_pred HHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCccccchh
Confidence 89999999999999999999999999999999999999862 2223333322222222 2234556777633222
Q ss_pred CCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHH-------HHHHHHHHHHHHHHHHHHHHHhh
Q 009816 263 TDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFA-------LCLFFAKLVAYTFLYWLPFYVSH 335 (524)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 335 (524)
+. ++.... .+..++. .+.. +.....-...++|+...... +-.+.+...+....+..+.+...
T Consensus 222 ~~--~~~~~~--~~~~~~~-~~~~------~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~ 290 (451)
T KOG2615|consen 222 RN--DEHSTL--QEAADDR-LALL------KFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHG 290 (451)
T ss_pred hc--ccccch--hhhhhhh-hhhc------chhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcC
Confidence 21 110000 0000000 0000 00011112334555433322 22222222222222333333233
Q ss_pred cccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhh--hhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 009816 336 TAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLD--ARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITG 413 (524)
Q Consensus 336 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 413 (524)
. +|+++.+.|.+++..++...+.+....+..+|.. .+..+... +.+....+++.- .............+..
T Consensus 291 r----fg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~-l~~~vP~~llls--~~~~~~~l~~~s~l~s 363 (451)
T KOG2615|consen 291 R----FGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFS-LLLIVPAFLLLS--LARTPVVLYLGSTLKS 363 (451)
T ss_pred c----cCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHH-HHHHHHHHHHHh--ccccchhhhHHHHHHH
Confidence 3 8999999999999988888877777666666654 22232222 223333333221 1233344455566666
Q ss_pred hhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc--ChhHHHHHHHH
Q 009816 414 MFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT--SWTAVFTMLMA 483 (524)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~--~~~~~~~~~~~ 483 (524)
+..+...+.....+....| ++++|+++|+....+.++.++||.+.|.+... +-+..+..-+.
T Consensus 364 f~~A~~vt~Lt~Lv~~~~~--------~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws~~~~~a~~~~~~ 427 (451)
T KOG2615|consen 364 FSTASVVTCLTSLVHKYGP--------QSQRGTLNGIFRSLGALARAIGPLVSGVIFSWSQGAQPAYIAWGA 427 (451)
T ss_pred HHHHHhhHHHHHHHHhcCC--------cccchHHHHHHHHHHHHHHHhhhhhhheeEEEecCCCceeeehHH
Confidence 6666666666666666655 47789999999999999999999999988876 44444443333
No 92
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.95 E-value=2.5e-26 Score=236.81 Aligned_cols=304 Identities=16% Similarity=0.201 Sum_probs=228.9
Q ss_pred HHHHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhhHhHHHHHHH
Q 009816 41 IVTFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTALLGELDLAFL 120 (524)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~s~~~ 120 (524)
+..++.++...+....++.+++.+.++ |+++. .+.|++.+.+.
T Consensus 36 ~~~~~~~~~~~~~~g~~~~~l~~iek~------------------------------F~lss-------~~~G~i~s~~~ 78 (633)
T TIGR00805 36 LLLTCAQLQGLLYNGLVNSSLTTIERR------------------------------FKLST-------SSSGLINGSYE 78 (633)
T ss_pred HHHHHHHHHHHHHHHHHHhhchhhhhh------------------------------hCCCC-------Ccceeeeehhh
Confidence 444556777777788888888988888 88887 89999999999
Q ss_pred HHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccc--------------------------c----------
Q 009816 121 SIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWG--------------------------N---------- 164 (524)
Q Consensus 121 l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~--------------------------~---------- 164 (524)
++++++.++.|+++||+|||+.+.++.+++++++++++++-+. .
T Consensus 79 i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~ 158 (633)
T TIGR00805 79 IGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQC 158 (633)
T ss_pred HHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCcccccc
Confidence 9999999999999999999999999999999999999875100 0
Q ss_pred ----------chhHHHHHHHHHHHHHhhhcchhhHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhhh-c---
Q 009816 165 ----------VHSFYYYLVVQMLAGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALLT-Y--- 230 (524)
Q Consensus 165 ----------~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~-~--- 230 (524)
...+..++++|+++|+|.+..++...+++.|++|+++|+++++++..+..+|.++|+++++++.+ +
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~ 238 (633)
T TIGR00805 159 PSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDT 238 (633)
T ss_pred ccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhccccc
Confidence 01356788999999999999999999999999999999999999999999999999999998873 2
Q ss_pred -------------------CchhHHHHhHHHHHHHHHHHHHhcCCCCCCC-CCCCccccccCCccccCCCcccccccchh
Q 009816 231 -------------------GWGWSFVVPGLIIAFVGLIVFLFLPVNPESV-GTDTNEEDESLSPKKIGEGVTQPLLRRET 290 (524)
Q Consensus 231 -------------------gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (524)
+|+..|++.+++.++.+++ ++++|++.+.. ...+.+.++....+ +... +...+...
T Consensus 239 ~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~-l~~~p~~lp~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~ 314 (633)
T TIGR00805 239 GSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIP-FFFFPKALPKEGKRVNVDVHETEKLE-KSED--KSRKKNSD 314 (633)
T ss_pred ccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH-HHhCccccCCcccccchhhhhhhccc-cccc--ccchhhhh
Confidence 1677788888888777654 44555543221 11110000000000 0000 00000001
Q ss_pred hhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHH-HHHhhhHHHHHH
Q 009816 291 KIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDV-GGVLGGILAGHI 369 (524)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~g~l 369 (524)
..++....+++++++|.++...+..++.....+++..++|.|+++. +|+++.+++++.....+ +.+++.+++|++
T Consensus 315 ~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~----~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l 390 (633)
T TIGR00805 315 ITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLENQ----YGISSAEANFLIGVVNLPAAGLGYLIGGFI 390 (633)
T ss_pred hHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----cCCcHHHHHHHhhhhhhhHHHHHHhhhhhe
Confidence 1122345577899999999999999999999999999999999988 89999999999887766 568899999999
Q ss_pred Hhhhh--hhHHHHHHHHHHHHH
Q 009816 370 SDRLD--ARAITAASFMYCAIP 389 (524)
Q Consensus 370 ~dr~~--~~~~~~~~~~~~~~~ 389 (524)
+||++ .|+.+..+.++..+.
T Consensus 391 ~~r~~~~~~~~~~~~~~~~~~~ 412 (633)
T TIGR00805 391 MKKFKLNVKKAAYFAICLSTLS 412 (633)
T ss_pred eeeecccHHHHHHHHHHHHHHH
Confidence 99987 345555444444443
No 93
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.94 E-value=7.3e-25 Score=217.85 Aligned_cols=370 Identities=14% Similarity=0.101 Sum_probs=248.6
Q ss_pred HHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhhHhHHHHHHHHH
Q 009816 43 TFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTALLGELDLAFLSI 122 (524)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~s~~~l~ 122 (524)
.++.+...++.....+.+++.+..| +|-+ ....|+.+.+.++
T Consensus 49 ~~~~~~~~~~~~~~~a~~l~~I~~d------------------------------iG~~--------~~~~w~~~~~~l~ 90 (599)
T PF06609_consen 49 FSLAVIAAYFVLVLPASILPYINAD------------------------------IGGS--------DNWSWFSTAWTLA 90 (599)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHh------------------------------cCCC--------ccchHHHHHHHHH
Confidence 4444445555666666666777777 5533 4578999999999
Q ss_pred HHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHHHHhhccccccc
Q 009816 123 YAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVAVVGNWFGKSKR 202 (524)
Q Consensus 123 ~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 202 (524)
..++.++.|+++|.||||..++.+.++..+|.++++.+ +|...++++..+.|+|.|... .....++|..|.|.|
T Consensus 91 ~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA-----~~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R 164 (599)
T PF06609_consen 91 SAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATA-----QNMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKWR 164 (599)
T ss_pred HHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcC-----CcHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccchh
Confidence 99999999999999999999999999999999999998 999999999999999977665 456668999999999
Q ss_pred cceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHHhc-CCCCCCCCCCCccccc-cCCcc----
Q 009816 203 GLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFLFL-PVNPESVGTDTNEEDE-SLSPK---- 275 (524)
Q Consensus 203 ~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~---- 275 (524)
....++.....-+...++|.++..+. +.+|||.|++.+++..+..++.+++. |++.++.+.++...++ .++.+
T Consensus 165 ~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~ 244 (599)
T PF06609_consen 165 GLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGI 244 (599)
T ss_pred hhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHH
Confidence 88877777666566666777777665 56899999998887776655544443 3221111111111111 00000
Q ss_pred ------------------ccCCCcccccc---------------cchhhhh-hhhhhHHHHhcCCC-cHHHHHHHHHHHH
Q 009816 276 ------------------KIGEGVTQPLL---------------RRETKIE-EKAVGFIEAWKIPG-VAPFALCLFFAKL 320 (524)
Q Consensus 276 ------------------~~~~~~~~~~~---------------~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 320 (524)
....+...... --|.... +++.-..+++|+++ +...++..++...
T Consensus 245 ~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~~~~~~~Pl~P~~Lf~~~r~~~~~lvi~fi~G~ 324 (599)
T PF06609_consen 245 FLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEWFGAPKDPLFPHRLFKDRRGFAALLVISFISGM 324 (599)
T ss_pred HHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhhhhccCCCCcCCHHHhccchHHHHHHHHHHHHHH
Confidence 00001111100 0011111 23344567888754 4444566667777
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCChh---hhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHH-HHHHHHHHHHHHHHHHh
Q 009816 321 VAYTFLYWLPFYVSHTAVDGKYLSSE---MAGNLSTLFDVGGVLGGILAGHISDRLDARAIT-AASFMYCAIPALFFYRS 396 (524)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~~~~~~ 396 (524)
.++....+.|...... ++-++. ..++.....+++..++.++.|.+..++++-|.. +++..++.+..-.+...
T Consensus 325 ~~~s~~~l~p~~~~~v----f~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~ 400 (599)
T PF06609_consen 325 NFFSVNILWPQQVVNV----FGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAV 400 (599)
T ss_pred HHHHHHHHHHHHHhhh----ccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHc
Confidence 7778888888887776 555543 567788888888889999999999888765554 45555554433333332
Q ss_pred hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhh
Q 009816 397 YGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYI 469 (524)
Q Consensus 397 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l 469 (524)
. .++....+...++.|++.+....+.....+-..| .+..|++.|+...++.+|+.+|..+...+
T Consensus 401 ~-~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p--------~~~ig~a~gL~~s~R~~GGsIg~aIy~~I 464 (599)
T PF06609_consen 401 R-PDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVP--------DEDIGTATGLTGSIRSIGGSIGYAIYNAI 464 (599)
T ss_pred c-CCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeC--------chHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 2 2333344566677777777766555554444444 37789999999999999999997766544
No 94
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.94 E-value=3.6e-25 Score=226.71 Aligned_cols=373 Identities=20% Similarity=0.240 Sum_probs=257.7
Q ss_pred hhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhH
Q 009816 110 ALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSV 189 (524)
Q Consensus 110 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~ 189 (524)
....+..+++++|..+|++++|+++||+|||+++++++++..++.++.+++ +|++.+++.|++.|++.+......
T Consensus 118 ~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a-----~~~~~~~~~Rfl~G~~~~~~~~~~ 192 (521)
T KOG0255|consen 118 TLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFA-----PNYWMFLIFRFLSGFFGSGPLTVG 192 (521)
T ss_pred hHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHh-----CcHHHHHHHHHHHHhhccchhHHh
Confidence 777888999999999999999999999999999999999999999999998 999999999999999999999999
Q ss_pred HHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhhhcCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCcccc
Q 009816 190 VAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALLTYGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNEED 269 (524)
Q Consensus 190 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (524)
..++.|++++++|+.+..+ ......+..+++++++++.. +||+.+++..+++++..+. +++.||+|++...+++.++
T Consensus 193 ~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~-~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~~g~~~~ 269 (521)
T KOG0255|consen 193 FGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR-DWRWLFWIISIPSGLFLLL-WFLPPESPRWLLSKGRIDE 269 (521)
T ss_pred HhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHH-HHccCcChHHHHHcCchHH
Confidence 9999999999999999999 77777788888887777766 8999999998888876444 6667799998765554433
Q ss_pred ccCCccccC-----CCcccccccc-------hhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 009816 270 ESLSPKKIG-----EGVTQPLLRR-------ETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTA 337 (524)
Q Consensus 270 ~~~~~~~~~-----~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (524)
..+..++.. ........+. .....++...+.++++.|++....+...+.++......+-++.....
T Consensus 270 a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~~~~~-- 347 (521)
T KOG0255|consen 270 AIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSLNVSG-- 347 (521)
T ss_pred HHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhhhhhhh--
Confidence 222111110 0000000000 00011122456777888766555555555544443333444444433
Q ss_pred cCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhh
Q 009816 338 VDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVN 417 (524)
Q Consensus 338 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 417 (524)
.|.+... .....+.....+....+...|+.|||.....+..+..++.+...........+...+...+..++.+
T Consensus 348 ---lg~~~~~---~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (521)
T KOG0255|consen 348 ---LGGNIYL---NFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIG 421 (521)
T ss_pred ---cCchHHH---HHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHH
Confidence 3444332 3333444666777777899999999999988888887777776654332221234444455555666
Q ss_pred hhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhcccChhHHHHHHHHHHHHHHHHHHHHHH
Q 009816 418 GPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISATSWTAVFTMLMAAALISGLLLTRLVV 497 (524)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (524)
..+........+.+|+ ..|+.+.+..+....++.+++|.+.-..........+.+.+....+...+.. ...
T Consensus 422 ~~~~~~~~~~~el~pt--------~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~l 492 (521)
T KOG0255|consen 422 SAFNLIFLYSAELIPT--------VVRNTAVGAISAAARLGSILAPLFPLLLRQMFPLLGLILFGWLALLLGLLSL-LLL 492 (521)
T ss_pred HHHHHHHHHHHhhccH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHHHHHHH-hcC
Confidence 6677778888888885 5679999999999999999999887544433122222223434444333332 344
Q ss_pred HHhhhhhhcc
Q 009816 498 AEVAAKFVES 507 (524)
Q Consensus 498 ~~~~~~~~~~ 507 (524)
+|++.+...+
T Consensus 493 pet~~~~l~~ 502 (521)
T KOG0255|consen 493 PETKGKPLPG 502 (521)
T ss_pred cccCCCCCch
Confidence 6666655443
No 95
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.94 E-value=1e-23 Score=211.76 Aligned_cols=374 Identities=13% Similarity=0.066 Sum_probs=253.0
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhccccc-CCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGDR-LDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQM 176 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr-~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~ 176 (524)
+|++. .+.|++.+.+.+++.++++++|+++|| +|||++++++.++.+++.++.+++ ++++.+++.|+
T Consensus 43 lg~s~-------~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~-----~~~~~~~~~~~ 110 (475)
T TIGR00924 43 LGFSQ-------EQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMS-----IYPDLIFYGLG 110 (475)
T ss_pred CCCCH-------HHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhc-----ccHhHHHHHHH
Confidence 66666 899999999999999999999999999 899999999999999999999986 78888999999
Q ss_pred HHHHhhhcchhhHHHHHhhcccccc---ccceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHH
Q 009816 177 LAGLFQSTGWPSVVAVVGNWFGKSK---RGLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFL 252 (524)
Q Consensus 177 l~G~~~~~~~~~~~~~i~~~~~~~~---r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~ 252 (524)
+.|++.|...+...++++|++|+++ |+.++++.+.+.++|.++||++++++. ++||++.|.+.++..++ +++.+.
T Consensus 111 l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~-~~l~~~ 189 (475)
T TIGR00924 111 TIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVI-GLLTFF 189 (475)
T ss_pred HHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHH-HHHHHH
Confidence 9999999999999999999998754 888999999999999999999999988 47999999997754443 344444
Q ss_pred hcCCCCCCCCCCCccccccCCccccC-C--------------Ccccccccc--------------hhhhhhhhhhHHHHh
Q 009816 253 FLPVNPESVGTDTNEEDESLSPKKIG-E--------------GVTQPLLRR--------------ETKIEEKAVGFIEAW 303 (524)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------------~~~~~~~~~--------------~~~~~~~~~~~~~~~ 303 (524)
..++..++.+.++.+.++.+...... . ...+..... .....++.....+..
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (475)
T TIGR00924 190 AGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLAVIIFFFRLAFKPRLDAVARN 269 (475)
T ss_pred HcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHh
Confidence 44432211111000000000000000 0 000000000 000000000000111
Q ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChh----hhhhHHHHHHHHHHhhhHHHHHHHhhhhhh---
Q 009816 304 KIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSE----MAGNLSTLFDVGGVLGGILAGHISDRLDAR--- 376 (524)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~----~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~--- 376 (524)
|...+..+.+...+.+..+....+.++.+.++. .+.+.. ..+++.++..+..++..++..++..|..||
T Consensus 270 ~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~----~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~ 345 (475)
T TIGR00924 270 KMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNN----MHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKD 345 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHh----ccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 112233444555555666667777788887664 222211 256777788888888777765544444432
Q ss_pred --HH--HHHHHHHHHHHHHHHHHh------hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhH
Q 009816 377 --AI--TAASFMYCAIPALFFYRS------YGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALAT 446 (524)
Q Consensus 377 --~~--~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 446 (524)
.. +.++.++.+++...+... ....+.++.++..++.+++-....+.....+.+..| ++.+|+
T Consensus 346 ~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP--------~~~~g~ 417 (475)
T TIGR00924 346 PTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAP--------QRLMGQ 417 (475)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCC--------HHHHHH
Confidence 22 255666655555444321 013467788888889999999999999999998887 477899
Q ss_pred HHHHHHhhhhhhhhhhhhhhHhhccc-ChhHHHHHHHHHHHHHHHHHHHHH
Q 009816 447 VTAIIDGTGSVGAAIGPLLTGYISAT-SWTAVFTMLMAAALISGLLLTRLV 496 (524)
Q Consensus 447 ~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 496 (524)
.+|+......+|..+++.+.....+. ++...|...++++++..++.....
T Consensus 418 ~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (475)
T TIGR00924 418 MLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMV 468 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988877666 677777777777766665555433
No 96
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.94 E-value=9.5e-31 Score=263.69 Aligned_cols=379 Identities=18% Similarity=0.239 Sum_probs=257.1
Q ss_pred hhhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccch---hHHHHHHHHHHHHHhhhcc
Q 009816 109 TALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVH---SFYYYLVVQMLAGLFQSTG 185 (524)
Q Consensus 109 ~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~---~~~~~~~~r~l~G~~~~~~ 185 (524)
..+.+++.+...+|..+|++++|.++||+|||+.++++.++..++.++.+++ + +++.+.++|++.|++.|..
T Consensus 45 ~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~-----~~~~~~~~~~~~R~~~G~~~g~~ 119 (451)
T PF00083_consen 45 SLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFA-----PSYNNFWMLLIGRFLIGFGIGGA 119 (451)
T ss_pred HHHHHHHHHHHHhhhccccccccccccccccccccccccccccccccccccc-----ccccccccccccccccccccccc
Confidence 4678999999999999999999999999999999999999999999999997 7 9999999999999999999
Q ss_pred hhhHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhhh----cCchhHHHHhHHHHHHHHHHHHHhcCCCCCCC
Q 009816 186 WPSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALLT----YGWGWSFVVPGLIIAFVGLIVFLFLPVNPESV 261 (524)
Q Consensus 186 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~----~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (524)
.+....++.|..|+++|++..++.+.+..+|.+++..++..+.. .+||..+.+.+++.++. ++...++||+|++.
T Consensus 120 ~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~-~~~~~~~pESP~wL 198 (451)
T PF00083_consen 120 YVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLV-LLLRFFLPESPRWL 198 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccccccccccee
Confidence 99999999999999999999999999999999999888765542 35999999988877665 45667899999998
Q ss_pred CCCCccccccCCccccC-CCcc----cccccchhhhhhhhhhHHHHhcCCC----cHHHHHHHHHHHHH-HHHHHHHHHH
Q 009816 262 GTDTNEEDESLSPKKIG-EGVT----QPLLRRETKIEEKAVGFIEAWKIPG----VAPFALCLFFAKLV-AYTFLYWLPF 331 (524)
Q Consensus 262 ~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~ 331 (524)
..++++++..+..++.. .+.. ++..++.++.++....++++++++. .........+..+. ......+.+.
T Consensus 199 ~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~ 278 (451)
T PF00083_consen 199 LSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPS 278 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccceeeeeccccccccccccccccccccccccccccccccccc
Confidence 66665554433322211 1010 1111111111111134555666543 22222222222112 2233344454
Q ss_pred HHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHH--H-hhcchh---HHHH
Q 009816 332 YVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFY--R-SYGHLS---LALN 405 (524)
Q Consensus 332 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~---~~~~ 405 (524)
+.++ .+.+.. -.......+..+++.+++.++.||+|||+.+..+...++++.+.+. . .....+ ....
T Consensus 279 i~~~-----~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (451)
T PF00083_consen 279 IFEN-----AGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILS 351 (451)
T ss_pred cccc-----cccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4444 355555 2233344566667777888999999999998888777766655553 1 111111 1222
Q ss_pred HHHHHHHHhhhh-hhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-ChhHHHHHHHH
Q 009816 406 IALMFITGMFVN-GPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-SWTAVFTMLMA 483 (524)
Q Consensus 406 ~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~~~~~~~ 483 (524)
++...+..++.+ +..+....+..|.+|+ +.|+++.|+....+.+++.+++.+...+.+. +....+.+.++
T Consensus 352 i~~~~l~~~~~~~g~~~~~~~~~~ElfPt--------~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~ 423 (451)
T PF00083_consen 352 IVFLALFFAFFSLGWGPLPWIYTAELFPT--------KVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAG 423 (451)
T ss_pred ceeeeeccccccccccccccccccccccc--------cccccccccccccccccccccccccccccccccccccchhhHH
Confidence 222222222333 2333444666787774 6678999999999999999999998888776 43455666666
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcccc
Q 009816 484 AALISGLLLTRLVVAEVAAKFVESRS 509 (524)
Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (524)
++++..++. ++..+|+++++.+|.+
T Consensus 424 ~~~i~~i~~-~~~lpET~g~~l~ei~ 448 (451)
T PF00083_consen 424 VCLIAIIFV-YFFLPETKGKTLEEIQ 448 (451)
T ss_pred HHHHHHhhe-eEEEeeCCCCCHHHHH
Confidence 555554433 4567888888776654
No 97
>PTZ00207 hypothetical protein; Provisional
Probab=99.93 E-value=8.3e-24 Score=211.94 Aligned_cols=406 Identities=15% Similarity=0.095 Sum_probs=274.2
Q ss_pred ccchhhHHHHHHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhhH
Q 009816 33 KNHQAIVLIVTFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTALL 112 (524)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 112 (524)
..+||.++.......... ...+.+++..+.+.++ +|++. .++
T Consensus 23 e~~Rw~~lva~~~~~~~~-g~~y~fsv~s~~L~~~------------------------------lgls~-------~~l 64 (591)
T PTZ00207 23 EPRRFALLVLGAFCSICT-SFMYAFNLISGAMQAR------------------------------YNLTQ-------RDL 64 (591)
T ss_pred ccchHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH------------------------------hCcCH-------HHH
Confidence 356777666555444333 3445677778888888 88887 889
Q ss_pred hHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccc-cchhHHHHHHHHHHHHHhhhcchhhHHH
Q 009816 113 GELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWG-NVHSFYYYLVVQMLAGLFQSTGWPSVVA 191 (524)
Q Consensus 113 g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~-~~~~~~~~~~~r~l~G~~~~~~~~~~~~ 191 (524)
+++.++. ..+..++++.|++.||+|||++++++.++++++.++++++... -..+++.+++.|++.|+|.+...+....
T Consensus 65 ~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~ 143 (591)
T PTZ00207 65 STITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVV 143 (591)
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988773 4556778889999999999999999999999999999985110 0158999999999999999999999999
Q ss_pred HHhhccccccccceehhhhhhhhhHHHHHHHHHHHhhhcCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCC--CC---Cc
Q 009816 192 VVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALLTYGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVG--TD---TN 266 (524)
Q Consensus 192 ~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~ 266 (524)
.+.+||| ++||++.|+...+.++|.++.+.+...+...+|+..|++.+++.++..++.+.++++.|.... .+ ++
T Consensus 144 ~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~ 222 (591)
T PTZ00207 144 TVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFSDNTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDE 222 (591)
T ss_pred HHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCH
Confidence 9999996 789999999999999999865444444444579999999999999988888887776543221 11 11
Q ss_pred cccc---------------------------------------------------------c------C-----------
Q 009816 267 EEDE---------------------------------------------------------S------L----------- 272 (524)
Q Consensus 267 ~~~~---------------------------------------------------------~------~----------- 272 (524)
+++. . .
T Consensus 223 ~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~~~~ 302 (591)
T PTZ00207 223 EEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTTFDG 302 (591)
T ss_pred HHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHHhcc
Confidence 1110 0 0
Q ss_pred Cccc-cCCCccccc-------ccchh-------h-h-hhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009816 273 SPKK-IGEGVTQPL-------LRRET-------K-I-EEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSH 335 (524)
Q Consensus 273 ~~~~-~~~~~~~~~-------~~~~~-------~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (524)
..++ +.+....+. .+.+. + . .+...++++.++...+|.+.+..++...........+.+..+.
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l~~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~s 382 (591)
T PTZ00207 303 KRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGLKTARLWCLLWSIFCCVGAHFVIIFNARFIYTA 382 (591)
T ss_pred CCcCCCccccccccccccccccccccccccccccCCCCCCcchHHHHHhchhHHHHHHHHHHhhCchheeeecHHHHHHH
Confidence 0000 000000000 00000 0 0 1111278888899999999999998888777777777777776
Q ss_pred cccCCCCCChhh--hhhHHHHHHHHHHhhhHHHHHHHhhhhhhH---------HHHHHHHHHHHHHHHHHHhhcchhHHH
Q 009816 336 TAVDGKYLSSEM--AGNLSTLFDVGGVLGGILAGHISDRLDARA---------ITAASFMYCAIPALFFYRSYGHLSLAL 404 (524)
Q Consensus 336 ~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (524)
. -|.+... ...+.++.++++.+|++..|.+.....+|+ .+.+..+ +.++.+++....+ ...
T Consensus 383 l----~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll~~~~p---~~~ 454 (591)
T PTZ00207 383 L----AGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSV-CIITMLTLFLTLP---KAA 454 (591)
T ss_pred h----cCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHH-HHHHHHHHHHHCC---ccH
Confidence 4 2552322 333678889999999999999883332222 2222333 3333333333222 135
Q ss_pred HHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhh-hhhhHhhccc-----------
Q 009816 405 NIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIG-PLLTGYISAT----------- 472 (524)
Q Consensus 405 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~-~~~~g~l~~~----------- 472 (524)
..+..++.|++.+..++.....+.+.++ ++.|+-.-+.....-+|..+- -.+.|.++|.
T Consensus 455 L~~~~~lvg~~~G~~~~~~~~i~selFg---------k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~ 525 (591)
T PTZ00207 455 LPLPYFIAAFANGFMAATIALVTRTIFA---------KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCT 525 (591)
T ss_pred hHHHHHHHHHHhhHhHHHHHHHHHHHhc---------cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeC
Confidence 6778888999999999999999999887 334665555555555555554 4567777765
Q ss_pred C---hhHHHHHHHHHHHHHHHHHHHH
Q 009816 473 S---WTAVFTMLMAAALISGLLLTRL 495 (524)
Q Consensus 473 ~---~~~~~~~~~~~~~~~~~~~~~~ 495 (524)
| ++.+|.+++++++++.+...++
T Consensus 526 G~~C~~~~~~v~~~~~~~g~~~s~~l 551 (591)
T PTZ00207 526 ERVCVVMPLAFLLGLSFLAFITSTYV 551 (591)
T ss_pred CceeeHhHHHHHHHHHHHHHHHHhhe
Confidence 1 6678888888888777765543
No 98
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.92 E-value=9.7e-22 Score=198.64 Aligned_cols=376 Identities=14% Similarity=0.076 Sum_probs=225.1
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhccccc-CCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGDR-LDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQM 176 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr-~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~ 176 (524)
+|+++ ++.+++.+.+........+++|+++|| +|||++++++.++.+++..+++++ .++.+.+.+.|+
T Consensus 52 lg~s~-------~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~----~~~~~~l~~~~~ 120 (500)
T PRK09584 52 LGMSE-------ADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWS----GHDAGIVYMGMA 120 (500)
T ss_pred cCCCH-------HHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHh----cccHHHHHHHHH
Confidence 78776 778888888776666777899999999 599999999999999999888885 245667778899
Q ss_pred HHHHhhhcchhhHHHHHhhcccccc--ccceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHH---H
Q 009816 177 LAGLFQSTGWPSVVAVVGNWFGKSK--RGLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLI---V 250 (524)
Q Consensus 177 l~G~~~~~~~~~~~~~i~~~~~~~~--r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~---~ 250 (524)
++|++.|...+...+++.|++|+++ |..++++++.+.++|..+||.+++++. ++|||+.|++.++..++..+. .
T Consensus 121 l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~ 200 (500)
T PRK09584 121 TIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFC 200 (500)
T ss_pred HHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999998643 456889999999999999999999998 579999999976543333222 2
Q ss_pred HHhcCCCCCCCCCCCccccccCCc---------cccCCCcccccccch---------hhhhhhhhhHHHHhcCCCcHHHH
Q 009816 251 FLFLPVNPESVGTDTNEEDESLSP---------KKIGEGVTQPLLRRE---------TKIEEKAVGFIEAWKIPGVAPFA 312 (524)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~ 312 (524)
...+++.++....++.+....... ............... ...........+.-++ +.+..
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~- 278 (500)
T PRK09584 201 QRWVKQYGSKPDFEPINYRKLLLTIVGVVALIAIATWLLHNQEIARMALGVVALGIVVIFGKEAFAMKGAARR-KMIVA- 278 (500)
T ss_pred HHHhccCCCCCCccccchhhHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhhcCHHHHH-HHHHH-
Confidence 222333211111000010000000 000000000000000 0000000000011111 12111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccc--CC---CCCChhhhhhHHHHHHHHHHhhhHHHHHHHh----hhhhhHHHHHHH
Q 009816 313 LCLFFAKLVAYTFLYWLPFYVSHTAV--DG---KYLSSEMAGNLSTLFDVGGVLGGILAGHISD----RLDARAITAASF 383 (524)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~~~~~~~~~~~ 383 (524)
+..++....++......+.++..... .+ .|+. ...+++.++..+..++..++..++-+ |.+..+.+.++.
T Consensus 279 ~~~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~-i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~ 357 (500)
T PRK09584 279 FILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIA-VEPEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGM 357 (500)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHhccccccceE-ECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHH
Confidence 22223333444444444444332100 00 1111 12445556666666666666644444 444456677777
Q ss_pred HHHHHHHHHHHHhhc------chhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhh
Q 009816 384 MYCAIPALFFYRSYG------HLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSV 457 (524)
Q Consensus 384 ~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~ 457 (524)
++.+++.+.+..... ..+.++.+...++.+++-....+.....+.+..| ++.||+++|+......+
T Consensus 358 ~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP--------~~~rg~~~g~~~l~~a~ 429 (500)
T PRK09584 358 VLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVP--------QRLMGFIMGSWFLTTAG 429 (500)
T ss_pred HHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCc--------HHHHHHHHHHHHHHHHH
Confidence 777777666543211 1124567777888899988888888999888887 47789999987766666
Q ss_pred hhhhhhhhhHhhcc----------c-ChhHHHHHHHHHHHHHHHHHHHH
Q 009816 458 GAAIGPLLTGYISA----------T-SWTAVFTMLMAAALISGLLLTRL 495 (524)
Q Consensus 458 g~~i~~~~~g~l~~----------~-~~~~~~~~~~~~~~~~~~~~~~~ 495 (524)
|..++..+.+.... . ++...|...+++.++..++....
T Consensus 430 g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~~ 478 (500)
T PRK09584 430 AALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLLT 478 (500)
T ss_pred HHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666543221 1 36677777777666555444433
No 99
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.91 E-value=4e-21 Score=186.92 Aligned_cols=343 Identities=20% Similarity=0.239 Sum_probs=249.4
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhcccccCC-chhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGDRLD-LRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQM 176 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~G-rr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~ 176 (524)
.|++. .|+|.+.+...+...++++++|.++||++ +|+.+.+..++.++........ ++++.+++.-+
T Consensus 32 ~G~s~-------~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~-----~~f~~~~~~~~ 99 (400)
T PF03825_consen 32 RGFSG-------TQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFS-----SSFWWLFVIML 99 (400)
T ss_pred CCCCH-------HHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHh-----ccHHHHHHHHH
Confidence 67776 99999999999999999999999999986 5777777777777766666664 78888888888
Q ss_pred HHHHhhhcchhhHHHHHhhccccccccceehhhhhhhhhHHHHHHHH-HHHhhh-c---CchhHHHHhHHHHHHHHHHHH
Q 009816 177 LAGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLV-ASALLT-Y---GWGWSFVVPGLIIAFVGLIVF 251 (524)
Q Consensus 177 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l-~~~l~~-~---gwr~~f~~~~~~~~~~~~~~~ 251 (524)
+..+......|...++..+... +++.-.|-.....++|.+++... ++.+.. . +..+.+++.+...++.+ ...
T Consensus 100 l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~-~~~ 176 (400)
T PF03825_consen 100 LFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLA-GFA 176 (400)
T ss_pred HHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHH-HHH
Confidence 8888888888888888888774 55667788888888898887554 233332 2 23345666555544443 334
Q ss_pred HhcCCCCCCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHH
Q 009816 252 LFLPVNPESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPF 331 (524)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (524)
+.+|+.|+++..++..+ +....+..+++|+|++..+.+..++..........+.+.
T Consensus 177 l~lp~~~~~~~~~~~~~------------------------~~~~~~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~ 232 (400)
T PF03825_consen 177 LFLPKTPPKRSAKESVK------------------------KLLGLDALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSI 232 (400)
T ss_pred HhCCCCccccccCCCcc------------------------cccchHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55677663221111000 001223457899999999989888888888889999999
Q ss_pred HHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHH---
Q 009816 332 YVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIAL--- 408 (524)
Q Consensus 332 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 408 (524)
|+++. -|.+....+.+.++..++.++.-...+++.+|++.++++.++.+..++=..+.... .++.+...+.
T Consensus 233 yl~~~----gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~--~~~~~~~~~~~~l 306 (400)
T PF03825_consen 233 YLQEL----GGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYF--SDPWPFIVALQLL 306 (400)
T ss_pred HHHHc----ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHh--cCCcHHHHHHHHH
Confidence 99996 23777888888888889999999999999999999999998888877766665543 1222222222
Q ss_pred -HHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhh-hhhhhhhhhhhhHhhccc-Chh------HHHH
Q 009816 409 -MFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGT-GSVGAAIGPLLTGYISAT-SWT------AVFT 479 (524)
Q Consensus 409 -~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~-~~~g~~i~~~~~g~l~~~-~~~------~~~~ 479 (524)
..+.|+.++..+.....++.+..| ++.++++.++++.. ..+|..+|..++|++.|+ +.+ ..+.
T Consensus 307 ~q~lhG~tf~~~~~a~~~yi~~~~p--------~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~ 378 (400)
T PF03825_consen 307 GQLLHGLTFGLFHAASVRYIDRIAP--------PELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFL 378 (400)
T ss_pred HHhhhhHHHHHHHHHHHHHHHHhCC--------ccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHH
Confidence 345788888888888888888887 47779999998876 479999999999999998 444 3344
Q ss_pred HHHHHHHHHHHHHH
Q 009816 480 MLMAAALISGLLLT 493 (524)
Q Consensus 480 ~~~~~~~~~~~~~~ 493 (524)
+.+++.++..++..
T Consensus 379 v~a~~~~~~~~~f~ 392 (400)
T PF03825_consen 379 VFAVMALVILVLFV 392 (400)
T ss_pred HHHHHHHHHHHHHH
Confidence 44444444444433
No 100
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.91 E-value=5e-22 Score=185.26 Aligned_cols=394 Identities=15% Similarity=0.154 Sum_probs=278.0
Q ss_pred cccccchhhHHHHHHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCch
Q 009816 30 LSFKNHQAIVLIVTFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGT 109 (524)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 109 (524)
.+..++||.++++..+..+++.+.+..++......... +| +.
T Consensus 37 ~rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~------------------------------Yg-s~------- 78 (480)
T KOG2563|consen 37 HRVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSF------------------------------YG-SS------- 78 (480)
T ss_pred cccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHH------------------------------hc-ch-------
Confidence 35678999999999999999999999998876655555 55 33
Q ss_pred hhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccc-hhHH--HHHHHHHHHHHhhhcch
Q 009816 110 ALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNV-HSFY--YYLVVQMLAGLFQSTGW 186 (524)
Q Consensus 110 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~-~~~~--~~~~~r~l~G~~~~~~~ 186 (524)
...-|+.-+|++.+....+++-|+.|++|-|..++++..+..++..+-..+..+.. +.++ ..+.+..+.+.++-...
T Consensus 79 ~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim 158 (480)
T KOG2563|consen 79 SAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFIL 158 (480)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhh
Confidence 56678899999999999999999999999999999999999999999888754322 3344 67788888888888777
Q ss_pred hhHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhhh-------cCchh--HHHHhHHHHHHHHHHHHHhcCCC
Q 009816 187 PSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALLT-------YGWGW--SFVVPGLIIAFVGLIVFLFLPVN 257 (524)
Q Consensus 187 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~-------~gwr~--~f~~~~~~~~~~~~~~~~~~~~~ 257 (524)
.....+-.-||+++||..+..+-..+..+|.++|.++...+.. ..|.. .|+..+++..+..++..+..++.
T Consensus 159 ~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~ 238 (480)
T KOG2563|consen 159 GLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKK 238 (480)
T ss_pred ccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 7777888999999999999999999999999999988888763 23554 35545555554445555556665
Q ss_pred CCCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 009816 258 PESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTA 337 (524)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (524)
|+..+....+... ......+.++.++++++....+++.+....+++..+.+-.-+..
T Consensus 239 P~tPps~s~~~~~---------------------~~~f~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~-- 295 (480)
T KOG2563|consen 239 PPTPPSASQAALQ---------------------DASFPKSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCP-- 295 (480)
T ss_pred CCCCCchhHhhhh---------------------cCcHHHHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhcccc--
Confidence 5554432221111 01145678899999999888888777766666666666555555
Q ss_pred cCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHH-HHHHHHHHHHHHHHHH-HhhcchhHHHHHHHHHHHHhh
Q 009816 338 VDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAI-TAASFMYCAIPALFFY-RSYGHLSLALNIALMFITGMF 415 (524)
Q Consensus 338 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~ 415 (524)
.|++...+|.+.....+++++++++.|.+.||.+.-+. ..+.......+.+.+. ........++......++|++
T Consensus 296 ---sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~ 372 (480)
T KOG2563|consen 296 ---SGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFF 372 (480)
T ss_pred ---ccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHh
Confidence 37777889999999999999999999999999876554 3333333333322221 111122334445556667777
Q ss_pred hhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-C----hhHHHHHHHHHHHHHHH
Q 009816 416 VNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-S----WTAVFTMLMAAALISGL 490 (524)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~----~~~~~~~~~~~~~~~~~ 490 (524)
..+.+|.-.-...|...| ..-++..|+.+..+++-+++-..+.+...+. + +...-+.+...+.+...
T Consensus 373 ~~~~~Pig~ElgvE~TyP--------v~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~ 444 (480)
T KOG2563|consen 373 GTGYLPIGFELGVETTYP--------VAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAI 444 (480)
T ss_pred hcCCCCcceeeeeeeccc--------cCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHH
Confidence 777666554444443332 2236788999999999888888888887766 3 33333444444444444
Q ss_pred HHHHH
Q 009816 491 LLTRL 495 (524)
Q Consensus 491 ~~~~~ 495 (524)
+..++
T Consensus 445 lva~~ 449 (480)
T KOG2563|consen 445 LVAFF 449 (480)
T ss_pred HHhhh
Confidence 44433
No 101
>PRK09669 putative symporter YagG; Provisional
Probab=99.90 E-value=2.6e-21 Score=194.14 Aligned_cols=336 Identities=17% Similarity=0.088 Sum_probs=230.4
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhccccc----CCch-hhHHHHHHHHHHHHHHHhcccc-ccchhHHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGDR----LDLR-IFLTVGMVGTGLFTSLYGIGYW-GNVHSFYYY 171 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr----~Grr-~~l~~~~~~~~~~~~~~~~a~~-~~~~~~~~~ 171 (524)
+|++. .+.|.+.++..+..++..|+.|+++|| +||| +.++.+.+..+++..+....+. .....++.+
T Consensus 40 ~gls~-------~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~ 112 (444)
T PRK09669 40 FGLSA-------AIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYA 112 (444)
T ss_pred cCCCH-------HHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHH
Confidence 88887 999999999999999999999999999 7775 5566677777766655443310 012335667
Q ss_pred HHHHHHHHHhhhcchhhHHHHHhhcc-ccccccceehhhhhhhhhHHHHHHHHHHHhh--------hcCchhHHHHhHHH
Q 009816 172 LVVQMLAGLFQSTGWPSVVAVVGNWF-GKSKRGLIMGIWNAHTSIGNITGSLVASALL--------TYGWGWSFVVPGLI 242 (524)
Q Consensus 172 ~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~--------~~gwr~~f~~~~~~ 242 (524)
++..++.+.+......+..++.+|+. ++++|++..++......+|..+++.+...+. +.+|+..+.+.+++
T Consensus 113 ~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii 192 (444)
T PRK09669 113 CVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLL 192 (444)
T ss_pred HHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHH
Confidence 77777777777777777788999988 4578998888888888888777766544332 23688888888877
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHH
Q 009816 243 IAFVGLIVFLFLPVNPESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVA 322 (524)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (524)
.++..+..++..+|.++... + + ..+....++..++||.++.+.+..++.....
T Consensus 193 ~~v~~~~~~~~~~e~~~~~~----~-~----------------------~~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~ 245 (444)
T PRK09669 193 GVVLFFCCFFMTKERYTPEV----D-N----------------------SSSVWKDLKLLLGNSQWRIMFIFNVVLLTAV 245 (444)
T ss_pred HHHHHHHHhCCeEEecCCCC----c-C----------------------CCCHHHHHHHHhCCchHHHHHHHHHHHHHHH
Confidence 77765555555554321110 0 0 0012344677889999888877766655555
Q ss_pred HHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhH
Q 009816 323 YTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSL 402 (524)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (524)
.......+.|.++. .+ ++...+.+.....+..+++.++.+++.||+++|+.+..+.....+....+.. .+..+.
T Consensus 246 ~~~~~~~~y~~~~~----~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~-~~~~~~ 319 (444)
T PRK09669 246 VTRGGATLYYVNYV----LL-RPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFF-IPPSNV 319 (444)
T ss_pred HHHhhhhheeeeee----cC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH-hCcchH
Confidence 44444444444443 33 2334444555566778888899999999999999887776655543333322 223455
Q ss_pred HHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-Ch
Q 009816 403 ALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-SW 474 (524)
Q Consensus 403 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~ 474 (524)
+..++..++.|++.+...+...+.+++..+..+...+ .+..|...|+.+.+..+|.++++.+.|.+.+. ||
T Consensus 320 ~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G-~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 320 WLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSG-RRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcC-cCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 5566667778888888888888888777653332222 35568889999999999999999999998876 54
No 102
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.90 E-value=1.5e-21 Score=197.09 Aligned_cols=340 Identities=11% Similarity=0.037 Sum_probs=232.1
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhcccc----cCCc-hhhHHHHHHHHHHHHHHHhccc-cccchhHHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGD----RLDL-RIFLTVGMVGTGLFTSLYGIGY-WGNVHSFYYY 171 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~D----r~Gr-r~~l~~~~~~~~~~~~~~~~a~-~~~~~~~~~~ 171 (524)
+|++. .++|.+..+.-+.-++..|+.|+++| |+|| |+.++++.+..+++..++.... ......+..+
T Consensus 37 ~Gls~-------~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~ 109 (473)
T PRK10429 37 VGLSV-------GLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFV 109 (473)
T ss_pred cCCCH-------HHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHH
Confidence 78777 99999999999999999999999999 6698 5567778777777765554321 0011134566
Q ss_pred HHHHHHHHHhhhcchhhHHHHHhhcc-ccccccceehhhhhhhhhHHHHHHHHHHHhh--------hcCchhHHHHhHHH
Q 009816 172 LVVQMLAGLFQSTGWPSVVAVVGNWF-GKSKRGLIMGIWNAHTSIGNITGSLVASALL--------TYGWGWSFVVPGLI 242 (524)
Q Consensus 172 ~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~--------~~gwr~~f~~~~~~ 242 (524)
++.-++.+++.....++..+++.|.. +++||.+..++-..+.++|..+.+.+...+. ..+|+....+.+++
T Consensus 110 ~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~ 189 (473)
T PRK10429 110 CVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAF 189 (473)
T ss_pred HHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHH
Confidence 66777788888888888899999998 5889999998877777777666554443321 12577777777776
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHH
Q 009816 243 IAFVGLIVFLFLPVNPESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVA 322 (524)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (524)
.++..+..++..||.+.....+..+ + ++.+.+..++.+++||.++.+.+..++.....
T Consensus 190 ~~~~~~~~~~~~~e~~~~~~~~~~~-~---------------------~~~~~~~~~~~~~~n~~~~~ll~~~~~~~~~~ 247 (473)
T PRK10429 190 FIVSTIITLRNVHEVYSSDNQVSAE-G---------------------SHLTLKDIVALIYKNDQLSCLLGMALAYNIAS 247 (473)
T ss_pred HHHHHHHHHcCceecCCcccccccc-c---------------------cCCCHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 6665555555556543211100000 0 00012233455678888887777777776666
Q ss_pred HHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHh--hcch
Q 009816 323 YTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRS--YGHL 400 (524)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 400 (524)
.....+.+.|.+.. .+ +....+.+.....++.+++.++.+++.||+|+|+.+..+..+..++.+.+... ....
T Consensus 248 ~~~~~~~~y~~~y~----~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (473)
T PRK10429 248 NIINGFAIYYFTYV----IG-DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPH 322 (473)
T ss_pred HHHhhheeeEEEEE----CC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCch
Confidence 66666666555554 33 45566677777778889999999999999999999887776655444433221 1233
Q ss_pred hHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc
Q 009816 401 SLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT 472 (524)
Q Consensus 401 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 472 (524)
+.+..++..++.|++.+..+....+.+++..+.. +.....|..|...|....+..++..+++.+.|++.+.
T Consensus 323 ~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~-e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~ 393 (473)
T PRK10429 323 NALLIVIAGILLNIGTALFWVLQVIMVADTVDYG-EYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGL 393 (473)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh-hHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555666777877777777777777776533 2333346678899999999999999999999998765
No 103
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.90 E-value=7.2e-21 Score=187.16 Aligned_cols=363 Identities=15% Similarity=0.036 Sum_probs=248.6
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhcccc----cCCchhhHHHH-HHHHHHHHHHHhccccccchhH----
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGD----RLDLRIFLTVG-MVGTGLFTSLYGIGYWGNVHSF---- 168 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~D----r~Grr~~l~~~-~~~~~~~~~~~~~a~~~~~~~~---- 168 (524)
+|.+. .+.+++..+..+...+.+++.|+++| |+||||.++++ .+...++.++++++ +++
T Consensus 34 lg~~~-------~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~-----~~~~~~~ 101 (477)
T TIGR01301 34 LGIPH-------AWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFA-----ADIGHLF 101 (477)
T ss_pred cCCCH-------HHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhC-----chhhhhc
Confidence 67766 99999999999999999999999999 59999987774 66666666776665 332
Q ss_pred -------------HHHHHHHHHHHHhhhcchhhHHHHHhhccccccc--cceehhhhhhhhhHHHHHHHHHHHhh--h-c
Q 009816 169 -------------YYYLVVQMLAGLFQSTGWPSVVAVVGNWFGKSKR--GLIMGIWNAHTSIGNITGSLVASALL--T-Y 230 (524)
Q Consensus 169 -------------~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~G~~ig~~l~~~l~--~-~ 230 (524)
+.+++.-.+..++.....++..++++|.+|+++| +.+.++.+...++|.++|+.++++.. . +
T Consensus 102 ~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~ 181 (477)
T TIGR01301 102 GDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIF 181 (477)
T ss_pred cccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhc
Confidence 2233333344557777888899999999998765 57999999999999999999998752 1 1
Q ss_pred -------------CchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCccccccCCccccCCCcccccccchhhhhhhhh
Q 009816 231 -------------GWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAV 297 (524)
Q Consensus 231 -------------gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (524)
+.|..|++.+++.++..++..+..+|.|....+...+ ++... ..+. ..++...
T Consensus 182 ~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~-~~~~~---~~~~----------~~~~~~~ 247 (477)
T TIGR01301 182 PFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFIN-SEAAP---PSKH----------GEEAFFG 247 (477)
T ss_pred ccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchh-hhccc---cccc----------chhhhHH
Confidence 5688999988888888788888888876432111000 00000 0000 0000111
Q ss_pred h-HHHHhcC-CCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChh------h----hhhHHHHHHHHHHhhhHH
Q 009816 298 G-FIEAWKI-PGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSE------M----AGNLSTLFDVGGVLGGIL 365 (524)
Q Consensus 298 ~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~------~----~~~~~~~~~~~~~~~~~~ 365 (524)
. ++...+- |.++.+++..++.+++.+.+..+...|..+.. ++.++. + ..+....+.+...+.+++
T Consensus 248 ~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v---~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~ 324 (477)
T TIGR01301 248 ELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREV---YGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIG 324 (477)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHH---cCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 2222222 45678889999999999999888888876432 332221 1 123444556666677788
Q ss_pred HHHHHhhhhh-hHHHHHHHHHHHHHHHHHHHhhcc-h----------------h-HHHHHHHHHHHHhhhhhhhHHHHHH
Q 009816 366 AGHISDRLDA-RAITAASFMYCAIPALFFYRSYGH-L----------------S-LALNIALMFITGMFVNGPYALITTA 426 (524)
Q Consensus 366 ~g~l~dr~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~----------------~-~~~~~~~~~~~g~~~~~~~~~~~~~ 426 (524)
..++.+|+|+ |+....+.++.+++.....+.... . . .+..++...+.|+..+..+..-++.
T Consensus 325 l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal 404 (477)
T TIGR01301 325 MEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFAL 404 (477)
T ss_pred HHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHH
Confidence 8899999985 566567766666655555432210 0 0 3556677788899999999999999
Q ss_pred HHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc---ChhHHHHHHHHHHHHHHHHHHHH
Q 009816 427 VSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT---SWTAVFTMLMAAALISGLLLTRL 495 (524)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~---~~~~~~~~~~~~~~~~~~~~~~~ 495 (524)
+++..+++ .+..|..+|+.|.+-.+...+.....|.+.+. +...++.+.++..++++++....
T Consensus 405 ~s~~~~~~------~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~ 470 (477)
T TIGR01301 405 ASIRSSNL------GAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALIL 470 (477)
T ss_pred HHHHcccc------CCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHh
Confidence 99888742 25569999999999999999999888875544 45556666666666666665543
No 104
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.90 E-value=6.1e-23 Score=178.41 Aligned_cols=362 Identities=15% Similarity=0.100 Sum_probs=246.3
Q ss_pred cchhhHHHHHHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhhHh
Q 009816 34 NHQAIVLIVTFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTALLG 113 (524)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g 113 (524)
.+|...+...|+.-+..++..-..+.+......| .+++. ++..
T Consensus 40 ~hr~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d------------------------------~ni~~-------akft 82 (459)
T KOG4686|consen 40 GHRFMALVFMCLLGFGSYFCYDAPGALQIDFKLD------------------------------SNIEY-------AKFT 82 (459)
T ss_pred hhHHHHHHHHHHhcccceeecCCchhhhhhhhcc------------------------------cccce-------eeee
Confidence 4555555566665566666666665555444444 44444 7888
Q ss_pred HHHHHHHHHHHhhhhhhhccccc-CCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHHH
Q 009816 114 ELDLAFLSIYAGGMFFSGHLGDR-LDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVAV 192 (524)
Q Consensus 114 ~~~s~~~l~~~~~~~~~G~l~Dr-~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~ 192 (524)
++.+.|.....+.++++|++.|| +|-|...++-++...++.++++...+ .+.+|.+...|++.|+|.-...++-.++
T Consensus 83 LlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi--~~aFw~M~~GRF~FGIGgESlAVaQN~y 160 (459)
T KOG4686|consen 83 LLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGI--SHAFWTMLAGRFLFGIGGESLAVAQNKY 160 (459)
T ss_pred eeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchH--HHHHHHHHhhheeeccCchhhhhhhcce
Confidence 99999999999999999999996 68887766666666777777765322 3899999999999999988888999999
Q ss_pred HhhccccccccceehhhhhhhhhHHHHHHHHHHHhhh-----cC--chh---HHHHhHHHHHHHHHHHHHhc--CCCCCC
Q 009816 193 VGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALLT-----YG--WGW---SFVVPGLIIAFVGLIVFLFL--PVNPES 260 (524)
Q Consensus 193 i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~-----~g--wr~---~f~~~~~~~~~~~~~~~~~~--~~~~~~ 260 (524)
...||..||.+.++|+.....-+|..+--.+.+++.+ ++ =+. .....+.......+.....+ .|...+
T Consensus 161 av~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~~~ghT~LG~~l~~~~~tc~~slical~lg~~D~rAe 240 (459)
T KOG4686|consen 161 AVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRMFPGVGHTLLGLWLCFEVKTCKQSLICALSLGLSDDRAE 240 (459)
T ss_pred eEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHH
Confidence 9999999999999999999999998876666666552 11 000 11111111111111111111 111110
Q ss_pred CCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCC
Q 009816 261 VGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDG 340 (524)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (524)
... + .++...-+.+ +..+ .--..|.+|.+.+..++.+.+.+.+...-|.++++.
T Consensus 241 ril-h---------~e~g~~Ge~p----------kLtd--v~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~r---- 294 (459)
T KOG4686|consen 241 RIL-H---------LEEGFLGEEP----------KLTD--VNTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKR---- 294 (459)
T ss_pred HHH-h---------hhcCcccCCc----------cccc--ccccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHh----
Confidence 000 0 0000000000 0000 001247889999999999999999999999999998
Q ss_pred CCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhh
Q 009816 341 KYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPY 420 (524)
Q Consensus 341 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 420 (524)
+|+|+..++.+.+.....+.+.+++.|.++||+|++.+.+.+..+..+..-....+ +.+..++...+.|+.+....
T Consensus 295 fGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~F----t~lsPy~~m~~lGLsysllA 370 (459)
T KOG4686|consen 295 FGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFF----TFLSPYTSMTFLGLSYSLLA 370 (459)
T ss_pred hCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHh----hhccHHHHHHHHhhhHHHHH
Confidence 99999999999998888888999999999999999987766655554443332221 12223444555666655544
Q ss_pred HHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc
Q 009816 421 ALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT 472 (524)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 472 (524)
-.....++..+|+ ++.|++.|..+.+.++|-++.|.++|.+.|.
T Consensus 371 cslWP~va~~vpE--------~qLGTaygf~qsIqNLgla~i~Iiag~i~d~ 414 (459)
T KOG4686|consen 371 CSLWPCVASLVPE--------EQLGTAYGFIQSIQNLGLAFIPIIAGFIADG 414 (459)
T ss_pred HHHhhhhhhhCCH--------HHhcchHHHHHHHHhhhhhHHhhhhheeecC
Confidence 4445555555653 6679999999999999999999999999998
No 105
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.89 E-value=4.7e-21 Score=181.37 Aligned_cols=277 Identities=15% Similarity=0.138 Sum_probs=206.4
Q ss_pred chhHHHHHHHHHHHHHhhhcchhhHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhhh---------------
Q 009816 165 VHSFYYYLVVQMLAGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALLT--------------- 229 (524)
Q Consensus 165 ~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~--------------- 229 (524)
..+|+.+++.-++.|.|.+...+..+.++++..++|++++.+++.+..+++|..++|.+++.+..
T Consensus 7 ~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~ 86 (310)
T TIGR01272 7 QRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANA 86 (310)
T ss_pred hhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhH
Confidence 37899999999999999999999999999999999999999999999999999999999997762
Q ss_pred --cCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCC
Q 009816 230 --YGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPG 307 (524)
Q Consensus 230 --~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (524)
.+|+++|++.+.+..+..++. .+.+ .|+.++++ +++. .. ++ ....++.+++|.
T Consensus 87 ~~~~~~~~yl~ia~~~~~~~i~~-~~~~-~p~~~~~~--~~~~-~~--~~------------------~~~~~~~~~~~~ 141 (310)
T TIGR01272 87 EAAKVHTPYLLLAGALAVLAIIF-AFLP-LPELQEAD--VARV-SS--GD------------------TTQKTSAFQFTH 141 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHcc-CCCCCccc--cccc-cc--cc------------------ccchhhHHhhHH
Confidence 369999997777665554433 2332 12111100 0000 00 00 000123567788
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHH
Q 009816 308 VAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCA 387 (524)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~ 387 (524)
++...+..++......+...|++.|+.+.. .+|+++.+.+...+.+..+.++|+++.+++.||+++|+.+..+..+..
T Consensus 142 ~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~--~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~ 219 (310)
T TIGR01272 142 LVLGALGIFVYVGAEVSAGSFLVNFLSDPH--ALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAV 219 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 887777778877788899999999997530 158999999999999999999999999999999999998877766666
Q ss_pred HHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhH
Q 009816 388 IPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTG 467 (524)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g 467 (524)
+..++.... .+ .......++.|++.+..+|...+...+.+++ ..+++.++. ....+|+++.|++.|
T Consensus 220 ~~~~l~~~~---~~-~~~~~~~~l~g~~~s~i~P~~~s~a~~~~~~---------~~~~asai~-~~~~~Gg~i~P~l~G 285 (310)
T TIGR01272 220 LLSIGAALT---HG-YVAMWFVLALGLFNSIMFPTIFSLALNALGR---------HTSQGSGIL-CLAIVGGAIVPLLQG 285 (310)
T ss_pred HHHHHHHHc---CC-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh---------hhhhhHHHH-HHHHhcchHHHHHHH
Confidence 554333321 12 2223455678899999999988888887763 235666664 567899999999999
Q ss_pred hhccc-ChhHHHHHHH
Q 009816 468 YISAT-SWTAVFTMLM 482 (524)
Q Consensus 468 ~l~~~-~~~~~~~~~~ 482 (524)
.+.|. +.+.++++..
T Consensus 286 ~lad~~g~~~a~~v~~ 301 (310)
T TIGR01272 286 SLADCLGIQLAFALPV 301 (310)
T ss_pred HHHHhccchHHHHHHH
Confidence 99997 8777776443
No 106
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.89 E-value=6.4e-20 Score=181.76 Aligned_cols=351 Identities=19% Similarity=0.175 Sum_probs=269.2
Q ss_pred hhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHH-HHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhh
Q 009816 110 ALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTV-GMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPS 188 (524)
Q Consensus 110 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~-~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~ 188 (524)
+..++..++..+..++..|+.|.++|+-|+||.++. ..++..+.+.++.+. ...+++...+.-++.-++.+...+.
T Consensus 70 s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v---~~~~~~~~~~l~iia~v~~~~~~vf 146 (477)
T PF11700_consen 70 SLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFV---SPGQWWLALVLFIIANVGYEASNVF 146 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHh---CcchHHHHHHHHHHHHHHHHHHHHH
Confidence 567788999999999999999999999997776544 445555555555553 1245555556666666777888899
Q ss_pred HHHHHhhccccccc--------------------------cceehhhhhhhhhHHHHHHHHHHHhh-h--------cCch
Q 009816 189 VVAVVGNWFGKSKR--------------------------GLIMGIWNAHTSIGNITGSLVASALL-T--------YGWG 233 (524)
Q Consensus 189 ~~~~i~~~~~~~~r--------------------------~~~~~~~~~~~~~G~~ig~~l~~~l~-~--------~gwr 233 (524)
..+++.|..+++++ ++..+.-.....+|.++.-++.-.+. . .+-|
T Consensus 147 yna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r 226 (477)
T PF11700_consen 147 YNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIR 226 (477)
T ss_pred HHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhh
Confidence 99999999999888 89999888888888888877665553 1 1258
Q ss_pred hHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHH
Q 009816 234 WSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFAL 313 (524)
Q Consensus 234 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (524)
..+.+.++.-++..+..++++|+.|+.+..++... .-....++-...++++.+.|....+++
T Consensus 227 ~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~------------------~~~~g~~~l~~t~k~~~~~~~~~~fLi 288 (477)
T PF11700_consen 227 VAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSGSS------------------YLRFGFKRLWRTFKEIRKLRQLFLFLI 288 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcchh------------------HHHHHHHHHHHHHHHHHhChHHHHHHH
Confidence 88999888888888999999998776321111000 000111223445667778888889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhh--HHHHHHHHHHHHHHH
Q 009816 314 CLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDAR--AITAASFMYCAIPAL 391 (524)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~--~~~~~~~~~~~~~~~ 391 (524)
+.++..-+...+......|.++. +|++..+...+..+..+.+++|+++.|++.||+|.| +.+..+..+..+..+
T Consensus 289 a~~l~~dg~~ti~~~~~i~a~~~----lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~ 364 (477)
T PF11700_consen 289 AYFLYSDGVNTIISFAGIYATEV----LGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPL 364 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh----cCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHH
Confidence 99998888889999999999988 899999999999999999999999999999999998 666665555433332
Q ss_pred HHHH-----hhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhh
Q 009816 392 FFYR-----SYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLT 466 (524)
Q Consensus 392 ~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~ 466 (524)
.... .....+.+.+++..++.|++.++.++..-+...+..|+ ++.+..+|++.......+.+||.+.
T Consensus 365 ~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~--------g~e~efFgly~i~gk~ss~lGPll~ 436 (477)
T PF11700_consen 365 YGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPP--------GREAEFFGLYAITGKASSWLGPLLF 436 (477)
T ss_pred HHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCC--------chhhHHHHHHHHHHHHHHHHHHHHH
Confidence 2221 11134566778888899999999999999999999985 5559999999999999999999999
Q ss_pred Hhhccc--ChhHHHHHHHHHHHHHHHHHH
Q 009816 467 GYISAT--SWTAVFTMLMAAALISGLLLT 493 (524)
Q Consensus 467 g~l~~~--~~~~~~~~~~~~~~~~~~~~~ 493 (524)
|.+.+. +.+..+....++.+++.++..
T Consensus 437 g~i~~~tg~~r~g~~~l~~lf~~gl~ll~ 465 (477)
T PF11700_consen 437 GLITDATGSQRYGFLFLLVLFLIGLILLF 465 (477)
T ss_pred HHHHHHhCCchhHHHHHHHHHHHHHHHHh
Confidence 999988 588888888777777766654
No 107
>PRK09848 glucuronide transporter; Provisional
Probab=99.89 E-value=1.2e-20 Score=189.72 Aligned_cols=334 Identities=13% Similarity=0.073 Sum_probs=218.2
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhcccccC----CchhhH-HHHHHHHHHHHHHH-hcc-ccccchhHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGDRL----DLRIFL-TVGMVGTGLFTSLY-GIG-YWGNVHSFYY 170 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~----Grr~~l-~~~~~~~~~~~~~~-~~a-~~~~~~~~~~ 170 (524)
+|++. .++|.+.+...+..++..++.|+++||. ||||.. +.+.+...+...+. ... ..........
T Consensus 39 ~gl~~-------~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (448)
T PRK09848 39 AGVGA-------AAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVY 111 (448)
T ss_pred cCCCH-------HHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHH
Confidence 67776 9999999999999999999999999996 777644 55555444444433 211 0001123344
Q ss_pred HHHHHHHHHHhhhcchhhHHHHHhhccc-cccccceehhhhhhhh-----hHHHHHHHHHHHhhh---cCchhHHHHhHH
Q 009816 171 YLVVQMLAGLFQSTGWPSVVAVVGNWFG-KSKRGLIMGIWNAHTS-----IGNITGSLVASALLT---YGWGWSFVVPGL 241 (524)
Q Consensus 171 ~~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~-----~G~~ig~~l~~~l~~---~gwr~~f~~~~~ 241 (524)
+++.-++.+++.+...++..++..+..+ +++|.+..++-..+.+ ++..++|.+++.... .+|.....+.++
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~v 191 (448)
T PRK09848 112 AYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVLAI 191 (448)
T ss_pred HHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHH
Confidence 5556667788888888777777777664 4678877666554333 455556666554321 112211122233
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHH
Q 009816 242 IIAFVGLIVFLFLPVNPESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLV 321 (524)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (524)
++++..++.....||+++.+.+ .......++.+++||.++...+..++....
T Consensus 192 ~~~~~~~~~~~~~~e~~~~~~~----------------------------~~~~~~~~~~l~~n~~f~~~~~~~~~~~~~ 243 (448)
T PRK09848 192 AGMVLYFICFKSTRENVVRIVA----------------------------QPSLKISLQTLKRNRPLFMLCIGALCVLIS 243 (448)
T ss_pred HHHHHHHHHHcCcEeccCCCcc----------------------------CCCHHHHHHHHhCCchHHHHHHHHHHHHHH
Confidence 3333333333333443211100 000223466789999998888888888777
Q ss_pred HHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchh
Q 009816 322 AYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLS 401 (524)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (524)
........|.|+++. +|.++...++......++.+++.++.+++.||+++|+.+.++..+..++.+.+.. .+..+
T Consensus 244 ~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~-~~~~~ 318 (448)
T PRK09848 244 TFAVSASSLFYVRYV----LNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFW-VSVWS 318 (448)
T ss_pred HHHHhhhheeeEeee----cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH-cCchh
Confidence 777777888888887 7877766555555556777888999999999999999998888777666555443 22334
Q ss_pred HHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc
Q 009816 402 LALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT 472 (524)
Q Consensus 402 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 472 (524)
.+...+..++.|++.+...+...+...+..+.++ .....+..|...|+.+....+|..+++.+.+.+.+.
T Consensus 319 ~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~-~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~ 388 (448)
T PRK09848 319 LPVALVALAIASIGQGVTMTVMWALEADTVEYGE-YLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGL 388 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhH-HhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555555667788878877777777776665432 222235679999999999999999999999887654
No 108
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.89 E-value=1.1e-21 Score=196.43 Aligned_cols=384 Identities=13% Similarity=0.060 Sum_probs=251.6
Q ss_pred hhhHHHHHHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhhHhHH
Q 009816 36 QAIVLIVTFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTALLGEL 115 (524)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~ 115 (524)
+...+.++...++...........+.+.+.++ +|++. ++++..
T Consensus 24 ~~~~~~~~~~~y~~qGl~~l~~~~~~~~l~~~------------------------------lg~s~-------~~i~~~ 66 (468)
T TIGR00788 24 PRVVLAIGLQVLFVKGIAGLMRLPLSPMLTDD------------------------------LGLDG-------ARYQRL 66 (468)
T ss_pred cchHHHHHHHHHHHhhHHHHhhhhhhHHHHHh------------------------------cCCCH-------HHHHHH
Confidence 33444555556666666533333455556666 88888 999999
Q ss_pred HHHHHHHHHhhhhhhhcccccCC-----chhhHHHHHHHHH-HHHHHHhccccccchh-HHHHHHHHHHHHHhhhcchhh
Q 009816 116 DLAFLSIYAGGMFFSGHLGDRLD-----LRIFLTVGMVGTG-LFTSLYGIGYWGNVHS-FYYYLVVQMLAGLFQSTGWPS 188 (524)
Q Consensus 116 ~s~~~l~~~~~~~~~G~l~Dr~G-----rr~~l~~~~~~~~-~~~~~~~~a~~~~~~~-~~~~~~~r~l~G~~~~~~~~~ 188 (524)
.+...+...+-.+ +|+++||++ ||+.++++.++.+ ++....+.. ++ .....+..++.+++.+...++
T Consensus 67 ~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~-----~~~~~~~~~~~~l~~~~~a~~dv~ 140 (468)
T TIGR00788 67 VGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGK-----VSSAKVAAAFIFLAALAKALYDVL 140 (468)
T ss_pred HHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccc-----cchHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999666 999999998 7778888877763 433333332 34 334445888999999999999
Q ss_pred HHHHHhhcccccccccee---hhhhhhhhhHHHHHHHHHHHhhh-cCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCC
Q 009816 189 VVAVVGNWFGKSKRGLIM---GIWNAHTSIGNITGSLVASALLT-YGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTD 264 (524)
Q Consensus 189 ~~~~i~~~~~~~~r~~~~---~~~~~~~~~G~~ig~~l~~~l~~-~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (524)
..+++.|..+ +++.... +.......+|.++|+.+++.+.+ ++||..|++.+++.++. .+..++++|++.....+
T Consensus 141 ~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~-~~~~~~~~E~~~~~~~~ 218 (468)
T TIGR00788 141 VDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQ-LFVSNLSKERRAFVRPR 218 (468)
T ss_pred HHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHH-HHHHHhccccccccccc
Confidence 9999999998 5554433 34444455899999999999884 69999999988887776 55566677753111110
Q ss_pred CccccccCCccccCCCccccccc-chhhhhhhhhhHHHHhcCCCcHHHHHHHHHH-HHHHHHHHHHHHHHHhhcccCCCC
Q 009816 265 TNEEDESLSPKKIGEGVTQPLLR-RETKIEEKAVGFIEAWKIPGVAPFALCLFFA-KLVAYTFLYWLPFYVSHTAVDGKY 342 (524)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g 342 (524)
..++.. .. . ..... .....++.....++.+++|.++...+..++. .........+. .+..+. .|
T Consensus 219 ~~~~~~------~~--~-~~~~~~~~~~~~~~~~~l~~~l~~~~i~~~l~fifl~~~~~~~~~~~~f-~~~~~~----lG 284 (468)
T TIGR00788 219 IGTYLE------MN--M-ALLTLGVLANVKVQILGLRGAIQLLEIAKPLIFIFLSYANLPGASGSVF-CATTQC----LP 284 (468)
T ss_pred ccccch------hh--h-hhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhhcCCCCceeE-EEEccc----CC
Confidence 000000 00 0 00000 0000111223455567788877765555542 11111110000 011122 79
Q ss_pred CChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhh-------cchhHHHHHHHHHHHHhh
Q 009816 343 LSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSY-------GHLSLALNIALMFITGMF 415 (524)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~g~~ 415 (524)
+++.+.|......+++.+++..+.+++.+|++.|+.+.++.++..++.+...... ...+.+.......+.+++
T Consensus 285 ~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~ 364 (468)
T TIGR00788 285 GGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVL 364 (468)
T ss_pred CCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHH
Confidence 9999999999999999999999999999999999998888877776654432110 002222334445566777
Q ss_pred hhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-C-----hhHHHHHHHHHHH
Q 009816 416 VNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-S-----WTAVFTMLMAAAL 486 (524)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~-----~~~~~~~~~~~~~ 486 (524)
.+..+.+....+.+..|+ +..|+..++.+.+.++|..+++.++|.+.+. | ++..+....+...
T Consensus 365 ~g~~~~~~~~~~~~~~p~--------~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~ 433 (468)
T TIGR00788 365 AQLKFMPFLVLLARLCPS--------GCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSL 433 (468)
T ss_pred HHHHHccHHHHHHHhCCC--------CceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHH
Confidence 777777778888888774 6669999999999999999999999988876 4 6666655444433
No 109
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.89 E-value=3.1e-21 Score=183.66 Aligned_cols=360 Identities=15% Similarity=0.080 Sum_probs=241.4
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHH---HHHHHHhccccccchhHHHHHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTG---LFTSLYGIGYWGNVHSFYYYLVV 174 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~---~~~~~~~~a~~~~~~~~~~~~~~ 174 (524)
.|++. +++|.+.++..+...+.+|+.|.++||+|.||-++..+.+.. ...+...+.+....+-+...++.
T Consensus 38 ~GLs~-------~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~iig 110 (412)
T PF01306_consen 38 AGLSG-------TEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLGAIIG 110 (412)
T ss_dssp H---H-------HHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHHHHT
T ss_pred cCCCH-------HHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56666 999999999999999999999999999997765544332221 12222222100001111222233
Q ss_pred HHHHHHhhhcchhhHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhhhcCchhHHHHhHHHHHHHHHHHHHhc
Q 009816 175 QMLAGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALLTYGWGWSFVVPGLIIAFVGLIVFLFL 254 (524)
Q Consensus 175 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~gwr~~f~~~~~~~~~~~~~~~~~~ 254 (524)
-+..|+......|+..+++.++. ++.+.=.|-.....++|.+++..++|.+...+-+..||+....+++..++.++..
T Consensus 111 ~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~i~p~~~fwi~s~~~~il~lll~~~~ 188 (412)
T PF01306_consen 111 GIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFNINPNIIFWIASAAAIILLLLLLLLK 188 (412)
T ss_dssp TTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS-
T ss_pred HHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeeeeCccHHHHHHHHHHHHHHHHHHHcC
Confidence 33344444455566666666654 3556677888899999999999999999877778889987666665544444444
Q ss_pred CCCCCCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009816 255 PVNPESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVS 334 (524)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (524)
|+.+++....+.++.+ +.+...+...+++|+|++|.+.+........+..+-...+.|..
T Consensus 189 ~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~ 248 (412)
T PF01306_consen 189 PDVPPQAEVADALGAK--------------------KDKVSLKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFA 248 (412)
T ss_dssp --SSSSS-SSTTSSS--------------------------HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCchhhhhhcccccC--------------------CCCCcHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4333322111100000 00012344678899999999888877777777777666777777
Q ss_pred hcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHh
Q 009816 335 HTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGM 414 (524)
Q Consensus 335 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 414 (524)
....+ .+.+....|.+.+..-+..++.-.+.+++.+|+|.|+.++++..++.+=...... .++.+.....-.+.++
T Consensus 249 ~~f~~-~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~---~~~~~~i~~~klLH~~ 324 (412)
T PF01306_consen 249 SFFQS-AGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGF---ATNPWVISLIKLLHAL 324 (412)
T ss_dssp HTSSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT-----SHHHHHHHHHHHHH
T ss_pred HHhcc-cccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhh---hcchHHHHHHHHHHHH
Confidence 64111 1345566788888888889999999999999999999999888887776655543 3566777778888888
Q ss_pred hhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHH-HhhhhhhhhhhhhhhHhhccc-ChhHHHHHHHHHHHHHHHHH
Q 009816 415 FVNGPYALITTAVSADLGTHSSLKGNSRALATVTAII-DGTGSVGAAIGPLLTGYISAT-SWTAVFTMLMAAALISGLLL 492 (524)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~-~~~~~~g~~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~ 492 (524)
-.........-++.+.+++ |..++...+. +...++|.++.+.++|.+.|+ |++.+|++++.+.+...++.
T Consensus 325 e~~l~lva~fkYI~~~fd~--------rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~ 396 (412)
T PF01306_consen 325 EFPLLLVAAFKYITAHFDK--------RLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLIS 396 (412)
T ss_dssp HHHHHHHHHHHHHHHHS-G--------GGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCH--------hHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHh
Confidence 8888888888888888873 6678888875 567799999999999999999 99999999988877666666
Q ss_pred HHHHHH
Q 009816 493 TRLVVA 498 (524)
Q Consensus 493 ~~~~~~ 498 (524)
.+..++
T Consensus 397 ~f~l~~ 402 (412)
T PF01306_consen 397 AFTLKK 402 (412)
T ss_dssp HHHS--
T ss_pred eeeecC
Confidence 654433
No 110
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.87 E-value=3.1e-20 Score=185.36 Aligned_cols=336 Identities=17% Similarity=0.159 Sum_probs=259.0
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhcccc----cCCchhh-HHHHHHHHHHHHHHHhcc-c--cccchhHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGD----RLDLRIF-LTVGMVGTGLFTSLYGIG-Y--WGNVHSFY 169 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~D----r~Grr~~-l~~~~~~~~~~~~~~~~a-~--~~~~~~~~ 169 (524)
+|+++ ...|.+..+..+--++..|+.|.++| |+||||. ++++.+..+++..++... + ........
T Consensus 32 ~gl~~-------~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~ 104 (428)
T PF13347_consen 32 LGLSP-------ALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLV 104 (428)
T ss_pred cCCCH-------HHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHH
Confidence 78877 99999999999999999999999999 8997765 667878888877777653 1 01112344
Q ss_pred HHHHHHHHHHHhhhcchhhHHHHHhhccc-cccccceehhhhhhhhhHHHHHHHHHHHhhh--------cCchhHHHHhH
Q 009816 170 YYLVVQMLAGLFQSTGWPSVVAVVGNWFG-KSKRGLIMGIWNAHTSIGNITGSLVASALLT--------YGWGWSFVVPG 240 (524)
Q Consensus 170 ~~~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~--------~gwr~~f~~~~ 240 (524)
.+.+.-++..++......+..++.+|..+ +++|.+..+.-..+..+|..+...+...+.. .+|++..++.+
T Consensus 105 ~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~ 184 (428)
T PF13347_consen 105 WLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLA 184 (428)
T ss_pred HHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHH
Confidence 56777777899999999999999999997 5789999999999888888766665555441 16999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHH
Q 009816 241 LIIAFVGLIVFLFLPVNPESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKL 320 (524)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (524)
++.++..++..+..+|.++....++ ++.+....++.+++||.++.+.+..++...
T Consensus 185 iv~~v~~~i~~~~~ke~~~~~~~~~-------------------------~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~ 239 (428)
T PF13347_consen 185 IVGLVFFLITFFFVKERSVEVTEQE-------------------------KKISLRDSLRSLFRNRPFRILLLAFFLQWL 239 (428)
T ss_pred HHHHHHhhhhhheeeeccccccccc-------------------------cccccccchhhhcccchHHHHHHHHHHHHh
Confidence 9888887777787777211111000 001123345778899999988888888888
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcch
Q 009816 321 VAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHL 400 (524)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (524)
.........+.|.++. .|.+ ...+.+.....++.+++.++.++++||+|+|+.+..+..+.+++.+.+.+.. ..
T Consensus 240 ~~~~~~~~~~y~~~~v----l~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~-~~ 313 (428)
T PF13347_consen 240 AFALMNTFLPYYFTYV----LGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLG-PG 313 (428)
T ss_pred hhhhhhhHHHHHHHHH----hcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHH-hh
Confidence 8887788888888887 5665 5667777788899999999999999999999999988888888777665542 25
Q ss_pred hHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc
Q 009816 401 SLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT 472 (524)
Q Consensus 401 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 472 (524)
+.+..++...+.|++.+..+....+..++..+..+. ...++..|...|+.+....++..+++.+.+.+.+.
T Consensus 314 ~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~-~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~ 384 (428)
T PF13347_consen 314 SPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEW-KTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLAL 384 (428)
T ss_pred hHHHHHHHHHHhHhhhcccccccccccccchhhHHH-hcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHH
Confidence 677788888899999998888888888877764433 33346679999999999999999999999988765
No 111
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.87 E-value=8.1e-19 Score=173.44 Aligned_cols=366 Identities=13% Similarity=0.083 Sum_probs=221.9
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhcccccC-CchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGDRL-DLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQM 176 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~ 176 (524)
+|+++ .+.+.+.+.+.....++.+++|+++||+ ||||+++++.++.+++.++++.. ..+...+.+...
T Consensus 40 lgls~-------~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~----~~~~~~~~l~l~ 108 (493)
T PRK15462 40 LKYDD-------NHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGAS----EIHPSFLYLSLA 108 (493)
T ss_pred cCCCH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHh----hcchhHHHHHHH
Confidence 67776 8899999999999999999999999999 99999999999999998777653 112233444444
Q ss_pred HHHHhhhcchhhHHHHHhhccccc--cccceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHHh
Q 009816 177 LAGLFQSTGWPSVVAVVGNWFGKS--KRGLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFLF 253 (524)
Q Consensus 177 l~G~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~ 253 (524)
+.++|.|...+...++++|.+|++ +|..++++.+.+.++|..++|.+.+++. ++||++.|.+.++ +.+.+++.+..
T Consensus 109 li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaai-gm~l~li~~~~ 187 (493)
T PRK15462 109 IIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAV-GMIAGLVIFLC 187 (493)
T ss_pred HHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHH-HHHHHHHHHHH
Confidence 555666777787889999999875 6999999999999999999999999998 5799999998655 44444544444
Q ss_pred cCCCCCCC-CCCCccccccCCccccCCCcc---------cccccch---hhhhhhh---------hhH----HHHh---c
Q 009816 254 LPVNPESV-GTDTNEEDESLSPKKIGEGVT---------QPLLRRE---TKIEEKA---------VGF----IEAW---K 304 (524)
Q Consensus 254 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~---~~~~~~~---------~~~----~~~~---~ 304 (524)
.++...+. ..+++..++ ++...... ....... .+..... .-+ .... .
T Consensus 188 ~~~~l~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 263 (493)
T PRK15462 188 GNRHFTHTRGVNKKVLRA----TNFLLPNWGWLLVLLVATPALITVLFWKEWSVYALIVATIIGLGVLAKIYRKAENQKQ 263 (493)
T ss_pred hhhhhccCCCCCCCCchh----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 33221111 000000000 00000000 0000000 0000000 000 0000 0
Q ss_pred CCCc---HHHHHHHHHHHHHHHHHHHHHHHHHhhcccCC-CCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhh-H--
Q 009816 305 IPGV---APFALCLFFAKLVAYTFLYWLPFYVSHTAVDG-KYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDAR-A-- 377 (524)
Q Consensus 305 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~-~-- 377 (524)
++++ ..+.+...+.+..+....+.+..|..+..... +|++ -.+++..++..+..++.+++..++-.|..+| +
T Consensus 264 r~r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~-ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~ 342 (493)
T PRK15462 264 RKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYT-VPTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTV 342 (493)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhccee-eCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 1122 22223333344444455566666665531111 2322 2345666777787778888777776665322 1
Q ss_pred ----HHHHHHHHHHHHHHHHHHhh------cchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHH
Q 009816 378 ----ITAASFMYCAIPALFFYRSY------GHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATV 447 (524)
Q Consensus 378 ----~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 447 (524)
-..++.++++++.+++.... ...+.++.+...++..++--...|...+.+.+..| ++.+|+.
T Consensus 343 s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP--------~~~~g~~ 414 (493)
T PRK15462 343 RIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEI--------PGVTGVL 414 (493)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhCh--------HHHHHHH
Confidence 24566666666665553211 11356667777777888877788888888888877 4788999
Q ss_pred HHHHHhhh-hhhhhhhhhhhHhhccc-------------ChhHHHHHHHHHHHHH
Q 009816 448 TAIIDGTG-SVGAAIGPLLTGYISAT-------------SWTAVFTMLMAAALIS 488 (524)
Q Consensus 448 ~g~~~~~~-~~g~~i~~~~~g~l~~~-------------~~~~~~~~~~~~~~~~ 488 (524)
+|+..... .+|..++..+.+..... .|...|...+...+++
T Consensus 415 mg~w~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 469 (493)
T PRK15462 415 TGIYMLLSGAIANYLAGVIADQTSQASFDASGAINYSINAYIEVFDQITWGALAC 469 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccCCccccccchhhhHHHHHHHHHHHHHHH
Confidence 99886533 56666666665554310 3556677777666555
No 112
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.85 E-value=2.5e-18 Score=165.40 Aligned_cols=339 Identities=17% Similarity=0.110 Sum_probs=260.6
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhccccc----CCchh-hHHHHHHHHHHHHHHHhcccc-ccchhHHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGDR----LDLRI-FLTVGMVGTGLFTSLYGIGYW-GNVHSFYYY 171 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr----~Grr~-~l~~~~~~~~~~~~~~~~a~~-~~~~~~~~~ 171 (524)
+|++. ...|.+..+--+--++.-|+.|.+.|| +||+| .++.+.+..++.+.++-.+.. ....+....
T Consensus 43 ~Gis~-------~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya 115 (467)
T COG2211 43 FGLSA-------ALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYA 115 (467)
T ss_pred cCCcH-------HHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHH
Confidence 88887 888888888888888999999999995 78755 577777888888888777621 112456677
Q ss_pred HHHHHHHHHhhhcchhhHHHHHhhccc-cccccceehhhhhhhhhHHHHHHHHHHHhhh--------cCchhHHHHhHHH
Q 009816 172 LVVQMLAGLFQSTGWPSVVAVVGNWFG-KSKRGLIMGIWNAHTSIGNITGSLVASALLT--------YGWGWSFVVPGLI 242 (524)
Q Consensus 172 ~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~--------~gwr~~f~~~~~~ 242 (524)
++.-.+.+++......+-.++.++..+ ++||.+..++-+.+..+|..+...+...+.. .||+..-.+.+++
T Consensus 116 ~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi 195 (467)
T COG2211 116 LVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVI 195 (467)
T ss_pred HHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHH
Confidence 788889999999998888899999885 5889999999999999987665544433331 4788888888888
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHH
Q 009816 243 IAFVGLIVFLFLPVNPESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVA 322 (524)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (524)
+.+..+.+++-.+|.+.+....+.. .+.+....+...++|+.++..++...+.....
T Consensus 196 ~~i~~l~~~~~v~ER~~~~~~~~~~-----------------------~~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~ 252 (467)
T COG2211 196 GVILLLFCFFNVKERVVETQPTKTG-----------------------VKLKLKDSFLLIFKNRPLLLLLLMNLLLFIAF 252 (467)
T ss_pred HHHHHHHHHHHhhcccCccccCccc-----------------------ccccHHHHHHHHHccchHHHHHHHHHHHHHHH
Confidence 8888777777777765422111100 00112334556889999988888777777777
Q ss_pred HHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhH
Q 009816 323 YTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSL 402 (524)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (524)
.........|.+.. .|.+.............+.+++.++..++.+|+|+|++...+.++.+++.+.+.+.. .++.
T Consensus 253 ~i~~s~~~yy~~y~----lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~-~~~~ 327 (467)
T COG2211 253 NIRGSIMVYYVTYV----LGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTP-AGSV 327 (467)
T ss_pred HHHhhhhheeEEEE----cCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhc-Ccch
Confidence 77777788888887 788888888888888888888899999999999999999999888888887776643 4556
Q ss_pred HHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc
Q 009816 403 ALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT 472 (524)
Q Consensus 403 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 472 (524)
+..++..++.+++.+...+...+.+++.. +..+.....|..|...|...++.-+|.+++..+.|++.+.
T Consensus 328 ~l~~~~~~i~~~g~~~~~~l~wam~~d~v-Dyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~ 396 (467)
T COG2211 328 VLIVVALIIAGVGTGIANPLPWAMVADTV-DYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGA 396 (467)
T ss_pred HHHHHHHHHHHHHhhccccccHHHhcchh-hHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666777788888887777776666655 4555555668889999999999999999999999998765
No 113
>PRK11462 putative transporter; Provisional
Probab=99.84 E-value=6.9e-18 Score=169.11 Aligned_cols=333 Identities=15% Similarity=0.077 Sum_probs=217.7
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhccccc----CCchhh-HHHHHHHHHHHHHHHhcccc-ccchhHHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGDR----LDLRIF-LTVGMVGTGLFTSLYGIGYW-GNVHSFYYY 171 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr----~Grr~~-l~~~~~~~~~~~~~~~~a~~-~~~~~~~~~ 171 (524)
+|++. ...|.+..+.-+--++..|+.|.++|| +||||. ++++.+..+++..++-..+. .....+..+
T Consensus 40 ~Gl~~-------~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~ 112 (460)
T PRK11462 40 FGIPA-------GFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYA 112 (460)
T ss_pred hCCCH-------HHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHH
Confidence 78887 889999999999999999999999996 788655 56676777777665543310 011124556
Q ss_pred HHHHHHHHHhhhcchhhHHHHHhhccc-cccccceehhhhhhhhhHHHHHHHHHHHhh-h-------cCchhHHHHhHHH
Q 009816 172 LVVQMLAGLFQSTGWPSVVAVVGNWFG-KSKRGLIMGIWNAHTSIGNITGSLVASALL-T-------YGWGWSFVVPGLI 242 (524)
Q Consensus 172 ~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~-------~gwr~~f~~~~~~ 242 (524)
.+.-++..++......+-.++.+|..+ ++||++..++...+..+|..+++.+...+. . .+|+....+.+++
T Consensus 113 ~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii 192 (460)
T PRK11462 113 AITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVV 192 (460)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHH
Confidence 667777788888888888889999886 689999999999999998888877654443 2 2577777777776
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHH
Q 009816 243 IAFVGLIVFLFLPVNPESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVA 322 (524)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (524)
.+++..+.+...+|.++... ++ .+.+..++..++||.++.+....++.....
T Consensus 193 ~~i~~~i~~~~~kE~~~~~~----~~------------------------~~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~ 244 (460)
T PRK11462 193 AFMMLAFCFFTTKERVEAPP----TT------------------------TSMREDLRDIWQNDQWRIVGLLTIFNILAV 244 (460)
T ss_pred HHHHHHHHHhcceeccCCCc----cC------------------------CCHHHHHHHHhCChHHHHHHHHHHHHHHHH
Confidence 66665555554444321110 00 001234567788888877766655555555
Q ss_pred HHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhH
Q 009816 323 YTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSL 402 (524)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (524)
.........|.+.. .|. +...+.+.....++.+++.++.++++||+++|+.+..+.....+..+++.. .+..+.
T Consensus 245 ~~~~~~~~y~~~y~----~g~-~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~-~~~~~~ 318 (460)
T PRK11462 245 CVRGGAMMYYVTWI----LGT-PEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFF-VPMQAS 318 (460)
T ss_pred HHHHhHhhhhhhhh----cCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH-hchhHH
Confidence 55445555555554 343 334455667778888999999999999999988766544433333333322 222233
Q ss_pred HHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc
Q 009816 403 ALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT 472 (524)
Q Consensus 403 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 472 (524)
+...+..++.|++.+...+.......+ ..++++.....+..|...+....+..+|.++++.+.|++.+.
T Consensus 319 ~~~~~~~~l~g~~~~~~~~l~~~m~ad-~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~ 387 (460)
T PRK11462 319 ITMFVFIFVIGVLHQLVTPIQWVMMSD-TVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAY 387 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444455666654444444444444 334334444446667777888888899999999998888765
No 114
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.83 E-value=3.5e-18 Score=159.01 Aligned_cols=347 Identities=17% Similarity=0.076 Sum_probs=262.9
Q ss_pred hhhHhHHHHHHHHHHHhhhhhhhcccccCCchhh-HHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchh
Q 009816 109 TALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIF-LTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWP 187 (524)
Q Consensus 109 ~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~-l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~ 187 (524)
.+..|...++..+..++.+|+.|.++|+.|+||- +-....+..++.++..++ ++.+.++..++.-.+..++.....+
T Consensus 57 ~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i--~~~s~~~~~l~~~il~~i~~~~s~V 134 (438)
T COG2270 57 TAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFI--PPGSYLLLLLLFLILASIGFEFSNV 134 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHh--CCCchHHHHHHHHHHHHHhcchhhe
Confidence 4778899999999999999999999999997665 444455555555555554 1113556666677788899888999
Q ss_pred hHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHH--Hhhh-----------------cCchhHHHHhHHHHHHHHH
Q 009816 188 SVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVAS--ALLT-----------------YGWGWSFVVPGLIIAFVGL 248 (524)
Q Consensus 188 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~--~l~~-----------------~gwr~~f~~~~~~~~~~~~ 248 (524)
.-.+++.+..++++-++..+.-.....+|.++.-+... .+.. ..-|..+.+.++--++..+
T Consensus 135 fyds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~i 214 (438)
T COG2270 135 FYDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFAL 214 (438)
T ss_pred ehhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHh
Confidence 99999999999988888888877777777776654431 1111 1357778888888888878
Q ss_pred HHHHhcCCCCCCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHH
Q 009816 249 IVFLFLPVNPESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYW 328 (524)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (524)
..++..++.++.....+ +. -....++-...+++..+++.+..+.++.++..-...+...+
T Consensus 215 Pm~~~v~~~~~~~~~~~-----------------~~---l~~g~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~ 274 (438)
T COG2270 215 PMILNVHDAEKISSPPP-----------------TA---LRNGFKELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAM 274 (438)
T ss_pred HHHhcccccccccccch-----------------HH---HHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHH
Confidence 88887776554220000 00 00112234456778888999999999999988888888899
Q ss_pred HHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHH
Q 009816 329 LPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIAL 408 (524)
Q Consensus 329 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (524)
...|.... +|++..+..++.....+.+++|+++.|++.||++.|+++..+.++..+..+..... ......+++
T Consensus 275 ~~~fg~~~----~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~---~~~~~f~i~ 347 (438)
T COG2270 275 GGVFGAAD----LGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFL---EGELDFWIL 347 (438)
T ss_pred HHHHHHHH----cCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHc---cccHHHHHH
Confidence 99999866 89999999999999999999999999999999999998888877777666555443 223445566
Q ss_pred HHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc--ChhHHHHHHHHHHH
Q 009816 409 MFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT--SWTAVFTMLMAAAL 486 (524)
Q Consensus 409 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~--~~~~~~~~~~~~~~ 486 (524)
.++.|.+.++.++..-++..+.+|+ +..++.+|+++..+.....+||.+.+.+.+. +.+..+....++.+
T Consensus 348 gll~g~s~G~~qA~SRSy~~~lvp~--------~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~ 419 (438)
T COG2270 348 GLLVGTSLGGAQASSRSYLARLVPK--------GKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLL 419 (438)
T ss_pred HHHHHHhcchHHHHHHHHHHHhCCC--------ccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHH
Confidence 6788999999999999999999985 4458999999999999999999999999887 56666666666555
Q ss_pred HHHHHH
Q 009816 487 ISGLLL 492 (524)
Q Consensus 487 ~~~~~~ 492 (524)
++.++.
T Consensus 420 iGl~~L 425 (438)
T COG2270 420 IGLLLL 425 (438)
T ss_pred hhHhhE
Confidence 554443
No 115
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.81 E-value=1.6e-16 Score=148.74 Aligned_cols=332 Identities=16% Similarity=0.095 Sum_probs=238.5
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhcccccCC-----chhh-HHHHHHHHHHHHHHHhcccccc-c-----
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGDRLD-----LRIF-LTVGMVGTGLFTSLYGIGYWGN-V----- 165 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~G-----rr~~-l~~~~~~~~~~~~~~~~a~~~~-~----- 165 (524)
++++. ...+.+.+...+..- ..+.+|+.+|+.+ ||.. +..|.++...+..+..++.+.- .
T Consensus 10 L~vpA-------~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~ 81 (403)
T PF03209_consen 10 LGVPA-------WLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQS 81 (403)
T ss_pred hccHH-------HHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccccccc
Confidence 66665 667777776665544 6899999999998 7755 5556666666665555432100 1
Q ss_pred --hh-HH--HHHHHHHHHHHhhhcchhhHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhh-hcCchh---HH
Q 009816 166 --HS-FY--YYLVVQMLAGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL-TYGWGW---SF 236 (524)
Q Consensus 166 --~~-~~--~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~---~f 236 (524)
+. .+ ...+.-.+.|+|.+....+..++++|..|+|+|+++.++.....-+|.+++..+.+.+. +++-.- .+
T Consensus 82 ~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~ 161 (403)
T PF03209_consen 82 SGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVI 161 (403)
T ss_pred ccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHH
Confidence 12 22 23345566899999999999999999999999999999999999999999999888776 554222 22
Q ss_pred HHhHHHHHHHHHHHHHhcCCCCCCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHH
Q 009816 237 VVPGLIIAFVGLIVFLFLPVNPESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLF 316 (524)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (524)
...+++.++..++..+- .|.+........+ ++.......+++++.+|+...+....+
T Consensus 162 ~~~a~i~~~l~~ia~wg-~E~r~~~~~~~~~----------------------~~~~~f~~a~~~~~~~~~a~~f~~fl~ 218 (403)
T PF03209_consen 162 QGVALIALLLNLIALWG-QEPRRSRRAAAAE----------------------RPRPPFREAWRQVWASPQARRFFVFLF 218 (403)
T ss_pred HHHHHHHHHHHHHHHHh-cccCCcccccCCC----------------------CCCccHHHHHHHHHhCCChhHHHHHHH
Confidence 23333333333332222 2222111110000 001113455678889999999888888
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHh-hhhhhHHHHHHHHHHHHHHHHHHH
Q 009816 317 FAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISD-RLDARAITAASFMYCAIPALFFYR 395 (524)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-r~~~~~~~~~~~~~~~~~~~~~~~ 395 (524)
+..+.++.--..+=+|-.+. +|++..+...+....+.+.++|-.+.|++.. |.++++...+++..+.++...+..
T Consensus 219 l~t~a~~~QD~iLEPygg~V----fgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~ 294 (403)
T PF03209_consen 219 LGTLAFFMQDVILEPYGGEV----FGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIIL 294 (403)
T ss_pred HHHHHHHhhHHHcCCchhHH----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 88888777777788888888 8999999999999999999999999998877 567777777888888777766665
Q ss_pred hhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc
Q 009816 396 SYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT 472 (524)
Q Consensus 396 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 472 (524)
.....+.+.+....+++|++.+.......+...+... ++..|..+|.....+.+...++..+.|.+.|.
T Consensus 295 a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~--------~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~ 363 (403)
T PF03209_consen 295 AGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTS--------AGRAGLFMGAWGAAQAIARGLGTFLGGALRDL 363 (403)
T ss_pred HHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCC--------CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555667788888899999988877776676666654 35679999999999999999999999988875
No 116
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.78 E-value=1.9e-17 Score=159.72 Aligned_cols=356 Identities=16% Similarity=0.150 Sum_probs=220.5
Q ss_pred chhhHhHHHHHHHHHHHhhhhhhhcccccCCc-hhhHHHHHHHHHHHHHHH-hccccccchhHHHHHHHHHHHHHhhhcc
Q 009816 108 GTALLGELDLAFLSIYAGGMFFSGHLGDRLDL-RIFLTVGMVGTGLFTSLY-GIGYWGNVHSFYYYLVVQMLAGLFQSTG 185 (524)
Q Consensus 108 ~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Gr-r~~l~~~~~~~~~~~~~~-~~a~~~~~~~~~~~~~~r~l~G~~~~~~ 185 (524)
+.+..|++.++..++.+++++..|++..|.+. |+.++.|.++..++.++. +++.. ....-+.++++|++.|+|.+.
T Consensus 69 ~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~-~~~~~y~mL~~R~l~Gvg~~n- 146 (488)
T KOG2325|consen 69 TATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYV-PNGVKYLMLVARILTGVGVGN- 146 (488)
T ss_pred CcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhc-ccchHHHHHHHHHHcCcCccc-
Confidence 34889999999999999999999999999997 888899999999999988 44322 223788999999999999765
Q ss_pred hhhHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhhhc---Cc-----------hhHHHHhHHHHHHHHHHHH
Q 009816 186 WPSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALLTY---GW-----------GWSFVVPGLIIAFVGLIVF 251 (524)
Q Consensus 186 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~---gw-----------r~~f~~~~~~~~~~~~~~~ 251 (524)
.....+|+++-...++|.++++....+..+|.++||.++..+... || -.+=|+++++.++..+...
T Consensus 147 ~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~ 226 (488)
T KOG2325|consen 147 FAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIIL 226 (488)
T ss_pred HHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHH
Confidence 577789999988889999999999999999999999988777531 22 2356677778888878888
Q ss_pred HhcCCCCCCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHH
Q 009816 252 LFLPVNPESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPF 331 (524)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (524)
++++|.++....++..+++..+ .+. ++.+..+.++ +..+.+.+..+...+......+..+.
T Consensus 227 ~~f~E~~~~~~~~~~~~~~~~~--~~~-----------~~~~~~~~d~------~~~~vc~~~~~~~~~~~~~iet~~~~ 287 (488)
T KOG2325|consen 227 FFFKEVYRGIIDKKKRSVEEEK--SDI-----------EKVKKPKLDW------VAVLVCIFLRFVVNFIATTIETLSSA 287 (488)
T ss_pred hheeecccCccccccccchhhc--cch-----------hhhccCChhH------HHHHHHHHHHHHHHHHHHHHHhccch
Confidence 8888876654322211110000 000 0000000000 11122333333334444444444555
Q ss_pred HHhhcccCCCCCChhhhhh----HHHHHHHHHHhhhHHHHHHH-hhhhhhHHHHHHHHHHHHHHHHHHHhh---------
Q 009816 332 YVSHTAVDGKYLSSEMAGN----LSTLFDVGGVLGGILAGHIS-DRLDARAITAASFMYCAIPALFFYRSY--------- 397 (524)
Q Consensus 332 ~~~~~~~~~~g~~~~~~~~----~~~~~~~~~~~~~~~~g~l~-dr~~~~~~~~~~~~~~~~~~~~~~~~~--------- 397 (524)
..... ++++..++-. ..++.++..+.-.+...+.. .++.+|+.+..+++.......+.....
T Consensus 288 ~~m~~----y~w~~~~av~~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~r~~~~~g~l~~f~~~~i~~yp~~~~s~pv~~ 363 (488)
T KOG2325|consen 288 LTMVM----YGWTGSEAVLYNGITLSISGILSVILLLLYIFTRLGKIDKRRIILLGFLIFFLSYYIFTYPWGFYSGPVQP 363 (488)
T ss_pred HHHHH----hccccchHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhccceeeeehHHHHHHhhheeeeecccccccccc
Confidence 55554 5666555543 33444443333333333332 222344444444333332222221100
Q ss_pred -c------------------chhHHHH-HHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhh
Q 009816 398 -G------------------HLSLALN-IALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSV 457 (524)
Q Consensus 398 -~------------------~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~ 457 (524)
+ ..+.+.. ....+++|.+.-.......+..++.+++ +..++..|+.......
T Consensus 364 ~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp--------~~q~~~qg~~~~~~s~ 435 (488)
T KOG2325|consen 364 YNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKILGP--------RDQGTMQGVFSISGSI 435 (488)
T ss_pred ccccccCcCcccchhhccCcccChhhheeehhheeccccccccchHHHHHHHHhCC--------ccccceeEEEEeccch
Confidence 0 0001111 1123344555555555677888888875 5558899999999999
Q ss_pred hhhhhhhhhHhhccc-ChhHHHHHHHHHHHHHHHHHHHHH
Q 009816 458 GAAIGPLLTGYISAT-SWTAVFTMLMAAALISGLLLTRLV 496 (524)
Q Consensus 458 g~~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 496 (524)
+..++|.+...+... |+++.+.+..+..++...+...+.
T Consensus 436 ~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~~~~l~~~~~ 475 (488)
T KOG2325|consen 436 ARVVGPIFSTAIFTLSGPRPVWIILLCLLLVVAALWIVFL 475 (488)
T ss_pred hhhhhHHHHhhhHHhcCccHHHHHHHHHHHHHHHHHHHHH
Confidence 999999988877777 888887777766665555544433
No 117
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.75 E-value=3.4e-15 Score=142.54 Aligned_cols=374 Identities=16% Similarity=0.142 Sum_probs=229.4
Q ss_pred hhHhHHHHHHHHHHHhhhhhhhcccccC-CchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhh
Q 009816 110 ALLGELDLAFLSIYAGGMFFSGHLGDRL-DLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPS 188 (524)
Q Consensus 110 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~ 188 (524)
++..-+.+.|.--.-+..+++|+++||+ |+|+++.+|.++.++|.++.+.+. ..+...++++-++.++|.|..-+.
T Consensus 61 ~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~---~~~~~gl~i~L~~I~iG~Gl~K~N 137 (498)
T COG3104 61 THATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISS---VSGPGGLYIGLALIIVGTGLFKPN 137 (498)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccc---cccccHHHHHHHHHHhcccccccc
Confidence 6666677777777778889999999995 999999999999999999999850 136888999999999999999999
Q ss_pred HHHHHhhccccc--cccceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCC
Q 009816 189 VVAVVGNWFGKS--KRGLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDT 265 (524)
Q Consensus 189 ~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (524)
..+++.|.+|++ +|-..+++++.+.++|..++|++.+++. ++||...|-..++ +...+++.+...+..-......+
T Consensus 138 iS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aav-Gm~~gl~~f~~~~r~~~~~~~~~ 216 (498)
T COG3104 138 ISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAV-GMIIGLVIFLLGRRHVKGIGGVP 216 (498)
T ss_pred HHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHH-HHHHHHHHHHHccchhcCCCCCC
Confidence 999999999864 3777899999999999999999999998 6899999998655 55555666655553322211111
Q ss_pred ccccccCCccc-cCCC-----cccc--cccchhhhh---------hhhhhHHHHhcCCC----------cHHHHHHHHHH
Q 009816 266 NEEDESLSPKK-IGEG-----VTQP--LLRRETKIE---------EKAVGFIEAWKIPG----------VAPFALCLFFA 318 (524)
Q Consensus 266 ~~~~~~~~~~~-~~~~-----~~~~--~~~~~~~~~---------~~~~~~~~~~~~~~----------~~~~~~~~~~~ 318 (524)
+.......... .... .... .....+... ....-+.+.++++. ...+.+...+.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~er~r~~~~~~Lfl~~~iF 296 (498)
T COG3104 217 DPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPKVFDERRRLLAAIPLFLFAVIF 296 (498)
T ss_pred CccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHH
Confidence 11000000000 0000 0000 000000000 00000111111111 12223333333
Q ss_pred HHHHHHHHHHHHHHHhhcccCC-CCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhh-------HHHHHHHHHHHHHH
Q 009816 319 KLVAYTFLYWLPFYVSHTAVDG-KYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDAR-------AITAASFMYCAIPA 390 (524)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~-------~~~~~~~~~~~~~~ 390 (524)
+..+....+.+..|..+....+ +|++ -...+..+...+.-++..++..++..|.+++ .-..++..+++.+.
T Consensus 297 W~~~~Q~~ssl~~~a~~~v~~~~~g~~-vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~f 375 (498)
T COG3104 297 WALYEQMGSSLNLYADRNVNRQIFGFE-VPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGF 375 (498)
T ss_pred HHHHHhccchHHHHHHHhhccccccee-cCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHH
Confidence 4444444566666665543222 2322 2334566667777777777777777774433 22345555555555
Q ss_pred HHHHHh-------hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhh
Q 009816 391 LFFYRS-------YGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGP 463 (524)
Q Consensus 391 ~~~~~~-------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~ 463 (524)
+++... ....+.++.+...++.+++--...+.-...+.+..|+ +..+.++++.......+..++.
T Consensus 376 l~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~--------~~~s~~ma~wfLt~a~~~~l~g 447 (498)
T COG3104 376 LILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPP--------ALKSFIMAMWFLTVAAGQTLGG 447 (498)
T ss_pred HHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChH--------HHHHHHHHHHHHHHHHHHHhhc
Confidence 444332 1224677778888888888777777788888888773 5667777777766666666666
Q ss_pred hhhHhh------ccc-ChhHHHHHHHHHHHHHHHHHHHHH
Q 009816 464 LLTGYI------SAT-SWTAVFTMLMAAALISGLLLTRLV 496 (524)
Q Consensus 464 ~~~g~l------~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 496 (524)
.+.+.. .+. .....|+.++....+.........
T Consensus 448 ~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~~~~~ 487 (498)
T COG3104 448 QVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGILLLLLS 487 (498)
T ss_pred eecccccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhh
Confidence 665521 111 455677777776666555544333
No 118
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.73 E-value=5.3e-16 Score=155.73 Aligned_cols=262 Identities=18% Similarity=0.273 Sum_probs=198.8
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhcccc---------------
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYW--------------- 162 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~--------------- 162 (524)
|+++. ++.|++.+.|-++..+...+..++.-|..|-+.+-+|.++++++.+++++--+
T Consensus 127 F~i~S-------s~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~ 199 (735)
T KOG3626|consen 127 FKISS-------SQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQS 199 (735)
T ss_pred cCCCC-------CcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhcc
Confidence 88887 88999999999999999999999999999999999999999999999987200
Q ss_pred ---c---------------------------cch--hHHHHHHHHHHHHHhhhcchhhHHHHHhhccccccccceehhhh
Q 009816 163 ---G---------------------------NVH--SFYYYLVVQMLAGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIWN 210 (524)
Q Consensus 163 ---~---------------------------~~~--~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~ 210 (524)
. ..+ -+..++++.++.|+|....++...+|+-|...+++-+..+|++.
T Consensus 200 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~ 279 (735)
T KOG3626|consen 200 VENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILY 279 (735)
T ss_pred ccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHH
Confidence 0 000 13367789999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHhhh----c----------------CchhHHHHhHHHHHHHHHHHHHhcCCC-CCCCCCCCcccc
Q 009816 211 AHTSIGNITGSLVASALLT----Y----------------GWGWSFVVPGLIIAFVGLIVFLFLPVN-PESVGTDTNEED 269 (524)
Q Consensus 211 ~~~~~G~~ig~~l~~~l~~----~----------------gwr~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 269 (524)
....+|.++|-++|+++.+ + -|..-|++.+.+.++.++.+++ +|+. |+...+.+..+.
T Consensus 280 ~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~-fPk~lp~~~~~~~~~~~ 358 (735)
T KOG3626|consen 280 SMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFF-FPKELPKSQKRKRARDL 358 (735)
T ss_pred HHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHh-CcccCccccccchhhhh
Confidence 9999999999999998863 1 1555677777777777665544 4544 332221110000
Q ss_pred ccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhh
Q 009816 270 ESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAG 349 (524)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 349 (524)
...+.+ +...+......++.++.+...+++++||.+....+...+....+.++.+++|-|++.+ +|.++..+.
T Consensus 359 ~~~k~~---~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Q----fg~sas~An 431 (735)
T KOG3626|consen 359 HVLKTE---SGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQ----FGISASLAN 431 (735)
T ss_pred cccccc---cccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHH----cCCCHHHHH
Confidence 000000 0001111111223445677889999999999999999999999999999999999999 999999999
Q ss_pred hHHHHHHHH-HHhhhHHHHHHHhhhh
Q 009816 350 NLSTLFDVG-GVLGGILAGHISDRLD 374 (524)
Q Consensus 350 ~~~~~~~~~-~~~~~~~~g~l~dr~~ 374 (524)
.+....++. ..+|.+++|++..|+.
T Consensus 432 ~l~G~i~vp~~~~Gi~lGG~iikkfk 457 (735)
T KOG3626|consen 432 ILTGSIGVPAAAVGIFLGGLIIKKFK 457 (735)
T ss_pred HHhhhhhhhhhhhhhhccceeeeeec
Confidence 988665544 4567788999999874
No 119
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.71 E-value=7.5e-19 Score=176.68 Aligned_cols=356 Identities=18% Similarity=0.241 Sum_probs=3.0
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhcccc---------------
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYW--------------- 162 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~--------------- 162 (524)
|+++. ++.|++.+.|-++..+..++..++.+|..|-|.+-.|.++.+++++++++--+
T Consensus 33 F~l~S-------~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~ 105 (539)
T PF03137_consen 33 FGLSS-------SQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNG 105 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCH-------HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCcccccccccc
Confidence 88888 99999999999999999999999999999999999999999999999876210
Q ss_pred --------c----------------------cchhHHHHHHHHHHHHHhhhcchhhHHHHHhhccccccccceehhhhhh
Q 009816 163 --------G----------------------NVHSFYYYLVVQMLAGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIWNAH 212 (524)
Q Consensus 163 --------~----------------------~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~ 212 (524)
- ...-+..++++.++.|+|.+..++...+|+-|..++++-+..+|+..+.
T Consensus 106 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~ 185 (539)
T PF03137_consen 106 NSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAM 185 (539)
T ss_dssp ----------------------------------------------SSS-------------------------------
T ss_pred ccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHH
Confidence 0 0002467888999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHhhhc----------------------C-chhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCcccc
Q 009816 213 TSIGNITGSLVASALLTY----------------------G-WGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNEED 269 (524)
Q Consensus 213 ~~~G~~ig~~l~~~l~~~----------------------g-wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (524)
..+|.++|-++++.+.++ | |=.-|++.+++.++.++..+.+-++-|......+..+.
T Consensus 186 ~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~lp~~~~~~~~~~~ 265 (539)
T PF03137_consen 186 SILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKLPGTSERQEEKES 265 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCcccccchhhh
Confidence 999999999999876531 1 44446666666666655554443333333111110000
Q ss_pred ccCCcccc-CCCcccc--cccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChh
Q 009816 270 ESLSPKKI-GEGVTQP--LLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSE 346 (524)
Q Consensus 270 ~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 346 (524)
+....++. .+...++ ........++.....+++++||.+....++.........++.+++|-|++.+ ++.++.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~Q----F~~sas 341 (539)
T PF03137_consen 266 SERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYLESQ----FGLSAS 341 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----hCCCHH
Confidence 00000000 0000000 0001122334556778899999999999999998889999999999999998 899999
Q ss_pred hhhhHHHHHHH-HHHhhhHHHHHHHhhhhh--hHHHHHHHHHHHHHHHH---HHHh-----------hcc----------
Q 009816 347 MAGNLSTLFDV-GGVLGGILAGHISDRLDA--RAITAASFMYCAIPALF---FYRS-----------YGH---------- 399 (524)
Q Consensus 347 ~~~~~~~~~~~-~~~~~~~~~g~l~dr~~~--~~~~~~~~~~~~~~~~~---~~~~-----------~~~---------- 399 (524)
+++++.....+ +..+|.+++|++.+|++- |..+....+...+..+. ..+. .+.
T Consensus 342 ~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~ 421 (539)
T PF03137_consen 342 QASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSC 421 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCC
Confidence 99988765554 667888999999999843 33332222222221111 1100 000
Q ss_pred ---------------------------hhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHH
Q 009816 400 ---------------------------LSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIID 452 (524)
Q Consensus 400 ---------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 452 (524)
.....+++..++..+..+....+........+++ ++|+.+.|+..
T Consensus 422 ~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR~V~~--------~~rs~AlGv~~ 493 (539)
T PF03137_consen 422 NLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITLRCVPP--------EQRSFALGVQW 493 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeeeccCCh--------hhcchhhhHHH
Confidence 0011222333333344444455555566666663 66789999988
Q ss_pred hhh-hhhhhhhhhhhHhhccc
Q 009816 453 GTG-SVGAAIGPLLTGYISAT 472 (524)
Q Consensus 453 ~~~-~~g~~i~~~~~g~l~~~ 472 (524)
.+. -+|.+-+|.+.|++.|.
T Consensus 494 ~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 494 LIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp ---------------------
T ss_pred HHHHhhcCcchHHHHhHHHhh
Confidence 765 56778899999999987
No 120
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.67 E-value=2.7e-14 Score=140.18 Aligned_cols=317 Identities=16% Similarity=0.167 Sum_probs=217.0
Q ss_pred HHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhh--hcchhhHHHHHhhc
Q 009816 119 FLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQ--STGWPSVVAVVGNW 196 (524)
Q Consensus 119 ~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~--~~~~~~~~~~i~~~ 196 (524)
-.+...+.++..|.++||+|||..+.+..+...+..++..+ ..+|.+. +.|+.. +.......++++|.
T Consensus 71 ~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~------~~~~~~~----~~~l~g~~~~~~s~~~a~vadi 140 (463)
T KOG2816|consen 71 AGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLF------QGYWFFL----LLGLSGGFSAIFSVGFAYVADI 140 (463)
T ss_pred hHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHH------HHHHHhh----hcccccchhhhhhhhhhheeec
Confidence 36677889999999999999999999999999999888888 4444444 444322 34578888999999
Q ss_pred cccccccceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCccccccCCcc
Q 009816 197 FGKSKRGLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNEEDESLSPK 275 (524)
Q Consensus 197 ~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (524)
...++|....++.......+..++|.+++.+. ..|.-.+|++.++..++..+..++++||+..+......+.. ....
T Consensus 141 s~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~--~~~~ 218 (463)
T KOG2816|consen 141 SSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLR--ELTP 218 (463)
T ss_pred cchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcccccccccc--ccCC
Confidence 99999999999999999999999999999998 56888999998888888888888889887544322210000 0000
Q ss_pred ccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHH-HHHHHHhhcccCCCCCChhhhhhHHHH
Q 009816 276 KIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLY-WLPFYVSHTAVDGKYLSSEMAGNLSTL 354 (524)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~ 354 (524)
+.. ......+........-.+|..+.+++..++.......-.. .++.|+... ++++..+.+.+.+.
T Consensus 219 ~~~---------~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~----f~w~~~~~s~~~~~ 285 (463)
T KOG2816|consen 219 GSL---------DSSHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAK----FGWNKKEFSDLLSL 285 (463)
T ss_pred Ccc---------cchhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeee----cCcCHHHHHHHHHH
Confidence 000 0000001111111222344455545544444443332222 345566666 89999999998888
Q ss_pred HHHHHHhhhHHHH-HHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcc
Q 009816 355 FDVGGVLGGILAG-HISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGT 433 (524)
Q Consensus 355 ~~~~~~~~~~~~g-~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 433 (524)
.+....++.++.. .+...++.++.+..+...-.+..+...+. ...|..+... ..........+...+..+...++
T Consensus 286 ~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~---~~~w~~~~~~-v~~~~~~~~~pa~~s~~s~~v~~ 361 (463)
T KOG2816|consen 286 VSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFA---TETWMMFAAG-VVVALAGIVFPAIRAFASILVSP 361 (463)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHh---ccchhhhHHH-HHHHhhcchhHHHHhHHHhhccc
Confidence 8888888888776 67777888887777776666666665543 2333323322 23334455566667777777664
Q ss_pred cccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc
Q 009816 434 HSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT 472 (524)
Q Consensus 434 ~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 472 (524)
+.+|.+.++...+..+...++|.+.+.+...
T Consensus 362 --------~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~ 392 (463)
T KOG2816|consen 362 --------EEQGKVFGIISGIEGLSGVVSPALYGNIFAL 392 (463)
T ss_pred --------ccccchhhHHHHHHHHhhhhhHHHHHHHHHH
Confidence 5569999999999999999999998877543
No 121
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.57 E-value=7.5e-15 Score=122.28 Aligned_cols=136 Identities=18% Similarity=0.306 Sum_probs=121.0
Q ss_pred HHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHHHHhh
Q 009816 116 DLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVAVVGN 195 (524)
Q Consensus 116 ~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~ 195 (524)
.+.+.++..+++++.|++.||+|||+.+..+..+..++.++...+ ++++.+.+.+++.|++.+...+...+++.|
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 78 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALS-----SNITVLIIARFLQGFGAAFALVAGAALIAD 78 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHh-----ccHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 355678888999999999999999999999999999888888876 889999999999999999999999999999
Q ss_pred ccccccccceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHHhcCC
Q 009816 196 WFGKSKRGLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFLFLPV 256 (524)
Q Consensus 196 ~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~ 256 (524)
.+|+++|++..++......+|..++|.+++.+. ..+|++.|++.+++.++..+..++..||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 79 IYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred HCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 999999999999999999999999999999887 4689999999888777776666665554
No 122
>PRK10054 putative transporter; Provisional
Probab=99.53 E-value=6.9e-13 Score=130.87 Aligned_cols=173 Identities=13% Similarity=0.122 Sum_probs=133.9
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHH
Q 009816 306 PGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMY 385 (524)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~ 385 (524)
+.++.+.+..++..........++|.|+++. +|++..+.|+..+...++.++++++.|+++||+|||+.+..+...
T Consensus 7 ~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~----~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~ 82 (395)
T PRK10054 7 RSTSALLASSLLLTIGRGATLPFMTIYLSRQ----YSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITA 82 (395)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHH
Confidence 3466677777888888888889999999876 799999999999999999999999999999999999988877776
Q ss_pred HHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhh
Q 009816 386 CAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLL 465 (524)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~ 465 (524)
..++.+.+.. .++.+..+....+.+.+.+...+.......+..+ ++.|+++.|+.+...++|.+++|.+
T Consensus 83 ~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--------~~~~~~~~g~~~~~~~lg~~igp~l 151 (395)
T PRK10054 83 FASGFIAIPL---VNNVTLVVLFFALINCAYSVFSTVLKAWFADNLS--------STSKTKIFSLNYTMLNIGWTVGPPL 151 (395)
T ss_pred HHHHHHHHHH---HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--------HhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6665554433 2344444444445555555555556666666665 3678999999999999999999999
Q ss_pred hHhhcccChhHHHHHHHHHHHHHHHHHH
Q 009816 466 TGYISATSWTAVFTMLMAAALISGLLLT 493 (524)
Q Consensus 466 ~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 493 (524)
.+++.+.+|+..|++.+++.++..++..
T Consensus 152 ~~~l~~~g~~~~f~~~~~~~~i~~i~~~ 179 (395)
T PRK10054 152 GTLLVMQSINLPFWLAAICSAFPLVFIQ 179 (395)
T ss_pred HHHHHHhccCcHHHHHHHHHHHHHHHHH
Confidence 9998866899999988777666544433
No 123
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.52 E-value=3.8e-13 Score=133.20 Aligned_cols=344 Identities=15% Similarity=0.139 Sum_probs=213.1
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhcccccCC-----chhhHHHHHHHHHHHHHHHhccccccchhHHHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGDRLD-----LRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYL 172 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~G-----rr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 172 (524)
+|+++ ++.....+...+...+ .++.|.++|-+. ||+-++++.++.+++.+..+... ....+.....
T Consensus 20 l~ls~-------~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~-~~~~s~~~~~ 90 (433)
T PF03092_consen 20 LGLSP-------AQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLP-ASESSAAIAV 90 (433)
T ss_pred cCCCH-------HHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcc-cccchhhhHH
Confidence 78777 8887777777766654 578899999863 55667778777765555555421 1124566667
Q ss_pred HHHHHHHHhhhcchhhHHHHHhhcccc--ccccceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHH
Q 009816 173 VVQMLAGLFQSTGWPSVVAVVGNWFGK--SKRGLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLI 249 (524)
Q Consensus 173 ~~r~l~G~~~~~~~~~~~~~i~~~~~~--~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~ 249 (524)
+.-++..+|.+.....+-+++.|...+ ++||...+.......+|.+++..++|.+. ..+++..|.+.+++..+..+.
T Consensus 91 ~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~ 170 (433)
T PF03092_consen 91 VLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIV 170 (433)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHH
Confidence 777888899999999999999998843 34677888888899999999999998888 568999999988887777665
Q ss_pred HHHhcCCCCCCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHH-HHHHHHHHHHHHHHH
Q 009816 250 VFLFLPVNPESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFAL-CLFFAKLVAYTFLYW 328 (524)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 328 (524)
..+..+|. ......+. ....+ ++. .......++.....++.++.|.++...+ ..++..........
T Consensus 171 ~~~~~~e~-~~~~~~~~--~~~~~--~~~-------~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~a- 237 (433)
T PF03092_consen 171 ALFLLEER-KVRPADEV--FSFGK--EEV-------PCLFGSFREQLSELWRALQQRAIWQPILFFIFFFNLPPSISSA- 237 (433)
T ss_pred HHHhhhhc-cccccchh--hcccc--ccc-------chhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCc-
Confidence 66655552 11111000 00000 000 0000002234455667777777776655 22222111111000
Q ss_pred HHHHH-hhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcc-------h
Q 009816 329 LPFYV-SHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGH-------L 400 (524)
Q Consensus 329 ~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 400 (524)
-..|. .+. ..+.|+++...+.+..+..++.++|..+..+...+..-|+++....++..+..+.-...... +
T Consensus 238 ~~fy~~~~~-~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~ 316 (433)
T PF03092_consen 238 SSFYFQTDA-LGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIP 316 (433)
T ss_pred cEEEEEecc-ccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcC
Confidence 00111 111 01234889888888888888888888888777777777777766665554443322111110 1
Q ss_pred hHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc
Q 009816 401 SLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT 472 (524)
Q Consensus 401 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 472 (524)
+.+..+.-..+..+.....+-+....+.+..|+ ..-|+..++...+.++|..++..+...+.+.
T Consensus 317 d~~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~--------G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~ 380 (433)
T PF03092_consen 317 DQWFALGDTILEEVIGMIAFMPSLVLAARLCPK--------GSEGTVYALLASFSNLGSSVSSTLGAFLMEL 380 (433)
T ss_pred CeEEEEEhHHHHHHHHHHHHHHHHHHHHHHCCC--------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111122223344444455556667777888875 4448999999999999999988888777654
No 124
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.51 E-value=4.5e-12 Score=117.19 Aligned_cols=231 Identities=15% Similarity=0.110 Sum_probs=159.3
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQML 177 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l 177 (524)
+|.++ .|++.+....+....+.+++.|.++||+|||+.-++.+++.+++.+.-.. ++++.+++.|++
T Consensus 64 yg~~~-------~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~~------~~~~~L~~GRvl 130 (354)
T PF05631_consen 64 YGFSE-------HQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKHS------SNYPVLLLGRVL 130 (354)
T ss_pred cCCCH-------HHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhc------cccHHHHHHHHH
Confidence 67777 99999999999999999999999999999999999999999998876665 899999999999
Q ss_pred HHHhhhcchhhHHHHH-hhcc----ccccccceehhhh-hhhhhHHHHHHHHHHHhhh-c--CchhHHHHhHHHHHHHHH
Q 009816 178 AGLFQSTGWPSVVAVV-GNWF----GKSKRGLIMGIWN-AHTSIGNITGSLVASALLT-Y--GWGWSFVVPGLIIAFVGL 248 (524)
Q Consensus 178 ~G~~~~~~~~~~~~~i-~~~~----~~~~r~~~~~~~~-~~~~~G~~ig~~l~~~l~~-~--gwr~~f~~~~~~~~~~~~ 248 (524)
.|++.+..+.+-.+++ .|.- |++..+.-++... ..+++-.+++.+++.++.+ . |-..+|....++.++.++
T Consensus 131 gGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~ 210 (354)
T PF05631_consen 131 GGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAV 210 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHH
Confidence 9999999999888875 4432 2222222222222 2233344555556655552 3 457889887777776666
Q ss_pred HHHHhcCCCCCCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHH-H
Q 009816 249 IVFLFLPVNPESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFL-Y 327 (524)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 327 (524)
++....+|......... + ..++....++.+.+||+++.+.+...+.-...+.+. .
T Consensus 211 ~I~~~W~ENyg~~~~~~-~-----------------------~~~~~~~a~~~i~~d~ril~LG~~qslFE~smy~FVfl 266 (354)
T PF05631_consen 211 LILKTWPENYGDTSSSS-S-----------------------LSGSFREAWRAILSDPRILLLGLIQSLFEGSMYLFVFL 266 (354)
T ss_pred HHHhcccccCCCccccc-c-----------------------hHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHheee
Confidence 65555555433211100 0 001123345667889999888888777766655443 5
Q ss_pred HHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhh
Q 009816 328 WLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDR 372 (524)
Q Consensus 328 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr 372 (524)
|.|..-.+ + ...-.|++++.+.++.++|+.+..++..+
T Consensus 267 WtPaL~~~------~-~~~P~GlIFssFM~a~MlGS~lf~~l~s~ 304 (354)
T PF05631_consen 267 WTPALDPD------D-EELPLGLIFSSFMVAMMLGSSLFSRLLSK 304 (354)
T ss_pred eeceecCC------C-CCCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 66655422 1 23347899999999999999888766554
No 125
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.49 E-value=4.4e-13 Score=133.08 Aligned_cols=149 Identities=10% Similarity=0.110 Sum_probs=127.2
Q ss_pred hhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhH
Q 009816 110 ALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSV 189 (524)
Q Consensus 110 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~ 189 (524)
...+...+...++..++.++.|+++||+|||++++++.++.+++..+...+. ....+++.+++.+++.|++.+...+..
T Consensus 251 ~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~-~~~~~~~~l~l~~~l~g~~~~~~~~~~ 329 (418)
T TIGR00889 251 KNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGD-PEYFGYALLFLSMIVYGCAFDFFNISG 329 (418)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcC-cchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 6679999999999999999999999999999999999999888876666530 001235677888999999999888999
Q ss_pred HHHHhhccccccccceehhhh-hhhhhHHHHHHHHHHHhhh-------cCchhHHHHhHHHHHHHHHHHHHhcCCCCC
Q 009816 190 VAVVGNWFGKSKRGLIMGIWN-AHTSIGNITGSLVASALLT-------YGWGWSFVVPGLIIAFVGLIVFLFLPVNPE 259 (524)
Q Consensus 190 ~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~ig~~l~~~l~~-------~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~ 259 (524)
..++.|++|+++|++++++.+ ...++|..+||+++|.+.+ +||+..|.+.+++.++..++.+++++|+..
T Consensus 330 ~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~ 407 (418)
T TIGR00889 330 SVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSHN 407 (418)
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 999999999999999999997 6788999999999998873 469999999999888888888888887633
No 126
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.48 E-value=2.1e-12 Score=129.23 Aligned_cols=166 Identities=22% Similarity=0.244 Sum_probs=130.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHH
Q 009816 311 FALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPA 390 (524)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 390 (524)
..+..++.++........+|.+.++ +|++..+.+++.+...++..+++++.|++.||+|+|+.+..+.++..++.
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~ 102 (434)
T PRK11663 28 MYLGYALFYFTRKSFNAAMPEMLAD-----LGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIIN 102 (434)
T ss_pred HHHHHHHHHHhhhhHHHhhHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHH
Confidence 3344444444445666778888877 59999999999999999999999999999999999999888888777766
Q ss_pred HHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhc
Q 009816 391 LFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYIS 470 (524)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~ 470 (524)
++... .++.+...+..++.|++.+..++.....+.+.++ ++.|++++|+.+....+|..++|.+.+++.
T Consensus 103 ~~~~~---~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~--------~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~ 171 (434)
T PRK11663 103 ILFGF---SSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYS--------RTERGGWWAIWNTAHNVGGALIPLVVGAIA 171 (434)
T ss_pred HHHHH---HhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCC--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65543 2455555555666777777777777788888776 367899999999999999999999999998
Q ss_pred cc-ChhHHHHHHHHHHHHHHHHH
Q 009816 471 AT-SWTAVFTMLMAAALISGLLL 492 (524)
Q Consensus 471 ~~-~~~~~~~~~~~~~~~~~~~~ 492 (524)
+. +|+..|++.+++.++..++.
T Consensus 172 ~~~gw~~~f~~~~i~~~~~~~~~ 194 (434)
T PRK11663 172 LHYGWRYGMMIAGIIAIVVGLFL 194 (434)
T ss_pred HcccHHHHHHHHHHHHHHHHHHH
Confidence 87 99999988877655444433
No 127
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.46 E-value=4.5e-13 Score=133.68 Aligned_cols=145 Identities=17% Similarity=0.147 Sum_probs=125.7
Q ss_pred hhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhH
Q 009816 110 ALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSV 189 (524)
Q Consensus 110 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~ 189 (524)
.+.|++.++..++..++.+++|++.||+|+|+.+..+.++.+++.++.+++ ++.+.+.+.+++.|++.+...+..
T Consensus 262 ~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~-----~~~~~~~~~~~l~g~~~~~~~~~~ 336 (420)
T PRK09528 262 RVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFA-----TGPLEVSILKLLHAFEVPFLLVGV 336 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhc-----ccHHHHHHHHHHHHHHHHHHHHHH
Confidence 678999999999999999999999999999999999999988888888876 788889999999999988888888
Q ss_pred HHHHhhccccccccceehh-hhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHHhcCCCCC
Q 009816 190 VAVVGNWFGKSKRGLIMGI-WNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFLFLPVNPE 259 (524)
Q Consensus 190 ~~~i~~~~~~~~r~~~~~~-~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~ 259 (524)
..++.+.+|++.|+...+. ++....+|.+++|.+.|++. .+||+..|.+.+++.++..++.++.++++++
T Consensus 337 ~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~~~~ 408 (420)
T PRK09528 337 FKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSGDRE 408 (420)
T ss_pred HHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcCCch
Confidence 8999999999888887665 66778899999999999998 4799999999888887776666666655433
No 128
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.46 E-value=4e-10 Score=107.43 Aligned_cols=329 Identities=16% Similarity=0.133 Sum_probs=214.3
Q ss_pred HHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHHHH
Q 009816 114 ELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVAVV 193 (524)
Q Consensus 114 ~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i 193 (524)
-+.-...-.+....++...+.|..+.|++++++.+...+...+..+. ++...+-+..+..|++.+. ..+-++++
T Consensus 45 ~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~-----~sv~~mq~~q~~yg~~~a~-evay~sYi 118 (412)
T PF01770_consen 45 EIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFG-----TSVLAMQLMQFFYGLATAA-EVAYYSYI 118 (412)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH-----CcHHHHHHHHHHHHHHHHH-HHHHHHHh
Confidence 44555666777888999999999999999999999988888888886 9999999999999999876 67788999
Q ss_pred hhccccccccceehhhhhhhhhHHHHHHHHHHHhhhcC---chhHHHHhHHHHHHHHHHHHHhcCCCCCCC---CCCCcc
Q 009816 194 GNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALLTYG---WGWSFVVPGLIIAFVGLIVFLFLPVNPESV---GTDTNE 267 (524)
Q Consensus 194 ~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~g---wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 267 (524)
-...|+++-.++.+...++.-+|..++.++|-.+.+.+ .+...++. +....++++..+++|..++.. +....+
T Consensus 119 ys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~is-l~~~~~a~~~~~fLP~~~~S~~f~r~~~~~ 197 (412)
T PF01770_consen 119 YSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYIS-LASVSLALLIALFLPMPKRSLFFHRKPPAE 197 (412)
T ss_pred eeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH-HHHHHHHHHHHHHcCCCCcccceeccCccc
Confidence 99999999999999999999999999999998887643 44444443 333444455667777654421 111110
Q ss_pred ccc-cCCccccCCCcc------cccc----cchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 009816 268 EDE-SLSPKKIGEGVT------QPLL----RRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHT 336 (524)
Q Consensus 268 ~~~-~~~~~~~~~~~~------~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (524)
+.. ..+.++..+..+ ++.. +...........+++..++|.++...+...+...++....++......+.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~qv~nYvQ~LW~~v 277 (412)
T PF01770_consen 198 QDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCGYYQVINYVQSLWDTV 277 (412)
T ss_pred cccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHHHHHHHHHHHHHHhc
Confidence 000 000000000000 0000 00111122345667778899998888888887777777666655555443
Q ss_pred ccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhh
Q 009816 337 AVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFV 416 (524)
Q Consensus 337 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 416 (524)
++.+-....-|.+-+...+.+.++.+..|++..++.+...+.++......+.+++.. ....+.+...+..++++..+
T Consensus 278 --~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm-~~t~~Iwv~Y~~yIif~~~y 354 (412)
T PF01770_consen 278 --PPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLM-SFTGNIWVCYAGYIIFRSLY 354 (412)
T ss_pred --CCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHH
Confidence 112344455677777788888888899999866665544444333332222222222 23467788888888887777
Q ss_pred hhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhh
Q 009816 417 NGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAA 460 (524)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ 460 (524)
....+.....++..+. .+..|...|++.++..+-..
T Consensus 355 ~fliTiA~~qIA~~l~--------~e~yaLVFGiNtf~Al~LQt 390 (412)
T PF01770_consen 355 MFLITIASFQIAKNLS--------EERYALVFGINTFVALVLQT 390 (412)
T ss_pred HHHHHHHHHHHHHhcc--------ccceeeeeeeHHHHHHHHHH
Confidence 7766666666666554 25567777777665544333
No 129
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.44 E-value=4.2e-12 Score=123.57 Aligned_cols=165 Identities=22% Similarity=0.311 Sum_probs=134.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHH
Q 009816 313 LCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALF 392 (524)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 392 (524)
+..++...........+|.++.+. +|.+..+.+++.+...++..++.++.|+++||+|||+.+..+..+.+++.++
T Consensus 3 l~~~~~~~~~~~~~~~~~~~~~~~----~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~ 78 (352)
T PF07690_consen 3 LAFFLSGFGFSIISPALPLYLAEE----LGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLL 78 (352)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHCC----STTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHc----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHH
Confidence 445556666666777777555555 7999999999999999999999999999999999999888888888777444
Q ss_pred HHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc
Q 009816 393 FYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT 472 (524)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 472 (524)
..+. .+.+..++..++.|++.+...+.....+.+..++ +.|+++.++.+....+|..++|.+.+.+.+.
T Consensus 79 ~~~~---~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~--------~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~ 147 (352)
T PF07690_consen 79 LAFA---SNFWLLLIARFLLGIGSGFFSPASNALIADWFPP--------EERGRAFGILSAGFSLGSILGPLLGGFLISY 147 (352)
T ss_dssp HHHH---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCT--------CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_pred hhhh---hhHHHHhhhccccccccccccccccccccccchh--------hhhhhccccccchhhhhhhcccchhhhhhhc
Confidence 4321 4455777888889999888899988999888874 5679999999999999999999999999876
Q ss_pred -ChhHHHHHHHHHHHHHHHHH
Q 009816 473 -SWTAVFTMLMAAALISGLLL 492 (524)
Q Consensus 473 -~~~~~~~~~~~~~~~~~~~~ 492 (524)
+|+..|++.+++.++..++.
T Consensus 148 ~~~~~~~~~~~~~~~~~~il~ 168 (352)
T PF07690_consen 148 FGWRWAFLISAILSLIAAILF 168 (352)
T ss_dssp CHHCCHHHHHHHHHHHHHHHH
T ss_pred cccccccccccchhhhhhhhH
Confidence 89999999988888776643
No 130
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.44 E-value=2.8e-12 Score=125.44 Aligned_cols=171 Identities=16% Similarity=0.069 Sum_probs=136.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHH
Q 009816 310 PFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIP 389 (524)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 389 (524)
.+....++..+........+|.|..+. +.++.+.+++.+...++..++.++.|+++||+|||+.+..+..+..++
T Consensus 3 ~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~ 77 (365)
T TIGR00900 3 LLFAAQLISLIGTAITQVALPLYVLAG-----TGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVL 77 (365)
T ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHHh-----hccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHH
Confidence 355666677777777778889988874 889999999999999999999999999999999999998887776665
Q ss_pred HHHHHHhh--cchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhH
Q 009816 390 ALFFYRSY--GHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTG 467 (524)
Q Consensus 390 ~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g 467 (524)
.+...... ...+.+..++..++.|++.+...+.....+.+..++ +.|+++.|+.+....+|..++|.+.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~g~~~g~~l~~ 149 (365)
T TIGR00900 78 VAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPE--------EQLTQANSLSQAVRSLFYIVGPGIGG 149 (365)
T ss_pred HHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCH--------HHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 55544321 112566677777888888888888888888887763 67899999999999999999999999
Q ss_pred hhccc-ChhHHHHHHHHHHHHHHHHHH
Q 009816 468 YISAT-SWTAVFTMLMAAALISGLLLT 493 (524)
Q Consensus 468 ~l~~~-~~~~~~~~~~~~~~~~~~~~~ 493 (524)
++.+. +|+..|++.++..+++.+...
T Consensus 150 ~l~~~~g~~~~~~~~~~~~~~~~~~~~ 176 (365)
T TIGR00900 150 LMYATLGIKWAIWVDAVGFAISALLIV 176 (365)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 99877 899988887766555444433
No 131
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.44 E-value=9.5e-13 Score=122.95 Aligned_cols=173 Identities=21% Similarity=0.278 Sum_probs=145.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHH
Q 009816 310 PFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIP 389 (524)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 389 (524)
...+.+...++.--.+..-.|...++ .++|..+.|.+.+.+.+..-++.++.|.++||.+.|+.+..+.++.++.
T Consensus 33 ~~fiGYa~fYl~RknF~~a~p~l~e~-----~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~ 107 (448)
T COG2271 33 SIFIGYAAFYLTRKNFNLAMPALIED-----GGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIV 107 (448)
T ss_pred HHHHHHHHHHHHHHhHhhccHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHH
Confidence 33444444444444555666666666 4899999999999999999999999999999999999999999999988
Q ss_pred HHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhh--H
Q 009816 390 ALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLT--G 467 (524)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~--g 467 (524)
.+++.+ ..+.+.+.++..+.|++.+..++++...+..-++. +.||+..++.|++.++|+.+.|++. +
T Consensus 108 nil~Gf---s~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr--------~eRG~~~siWn~shNiGGal~~~~~~la 176 (448)
T COG2271 108 NILFGF---SPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSR--------KERGTWWSIWNTSHNIGGALAPLVALLA 176 (448)
T ss_pred HHHHhh---hhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCc--------cccCceEEEehhhhhcccchHHHHHHHH
Confidence 888765 35788888899999999999999999999999884 6679999999999999999999999 8
Q ss_pred hhccc-ChhHHHHHHHHHHHHHHHHHHHHHHH
Q 009816 468 YISAT-SWTAVFTMLMAAALISGLLLTRLVVA 498 (524)
Q Consensus 468 ~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (524)
++.++ +|+..|++-++++++..++.+...+.
T Consensus 177 ~~~~~~~w~~~f~~pgiiaiival~~~~~~rd 208 (448)
T COG2271 177 FFAFHGGWRAAFYFPGIIAIIVALILLFLLRD 208 (448)
T ss_pred HHHhccchhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 88887 99999999999888877776655443
No 132
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.44 E-value=7.2e-12 Score=124.39 Aligned_cols=173 Identities=14% Similarity=0.151 Sum_probs=130.1
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhh-hhhHHHHHHHHH
Q 009816 307 GVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRL-DARAITAASFMY 385 (524)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~~~~~~~~ 385 (524)
.++......+...+.+++...++|.|+++. +|++..+++.+...+.....++.+++|+++||+ |||+.+..+.++
T Consensus 10 ~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~----lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il 85 (493)
T PRK15462 10 AIYYVVALQIWEYFSFYGMRALLILYLTNQ----LKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALL 85 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHH
Confidence 355556666777888899999999999887 799999999999999999999999999999999 999999888888
Q ss_pred HHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhh
Q 009816 386 CAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLL 465 (524)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~ 465 (524)
.+++.+++... ..+.....+...+..++.+...+...+.+.+.+|++ ++.|.++.++.....++|+.++|.+
T Consensus 86 ~~lg~lll~~~--~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~------~~~R~sgf~i~Y~~~nlG~~iap~l 157 (493)
T PRK15462 86 MAIGHVVLGAS--EIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPT------DPRRDGGFSLMYAAGNVGSIIAPIA 157 (493)
T ss_pred HHHHHHHHHHh--hcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCC------CccccceehHHHHHHHHHHHHHHHH
Confidence 87776544321 111122233333344444555555667778887753 2356778999999999999999999
Q ss_pred hHhhccc-ChhHHHHHHHHHHHHHHHH
Q 009816 466 TGYISAT-SWTAVFTMLMAAALISGLL 491 (524)
Q Consensus 466 ~g~l~~~-~~~~~~~~~~~~~~~~~~~ 491 (524)
.+++.+. ||+..|.+.++..+++.+.
T Consensus 158 ~g~L~~~~Gw~~~F~iaaigm~l~li~ 184 (493)
T PRK15462 158 CGYAQEEYSWAMGFGLAAVGMIAGLVI 184 (493)
T ss_pred HHHHHhhhChHHHHHHHHHHHHHHHHH
Confidence 9999877 9999998876655444433
No 133
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.43 E-value=9.4e-12 Score=126.17 Aligned_cols=180 Identities=14% Similarity=0.100 Sum_probs=134.8
Q ss_pred HHhcCCC-cHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhh-hhhhHH
Q 009816 301 EAWKIPG-VAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDR-LDARAI 378 (524)
Q Consensus 301 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~ 378 (524)
+.+++|+ ++......++..+.++....+++.|+++. +|++..+++.+............+++|+++|| +|||+.
T Consensus 15 ~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~----lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~ 90 (500)
T PRK09584 15 NAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQ----LGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRV 90 (500)
T ss_pred hhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHH
Confidence 4556775 77777777888888899999999999887 89999988887777665555556789999999 599999
Q ss_pred HHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhh
Q 009816 379 TAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVG 458 (524)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 458 (524)
+..+..+.+++..++... ..+.+...+...+.|++.+...+.....+.+.+|+++ +.+..+.++.+...++|
T Consensus 91 ~~~g~~~~~ig~~l~~~~--~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~------~~~~~~~~~~~~~~~iG 162 (500)
T PRK09584 91 IMLGAIVLAIGYALVAWS--GHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDD------PRLDGAFTMYYMSINIG 162 (500)
T ss_pred HHHHHHHHHHHHHHHHHh--cccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCc------hhhhhcchHHHHHHHHH
Confidence 998888877766555432 1223334455566777777767777777887776431 33455778888899999
Q ss_pred hhhhhhhhHhhccc-ChhHHHHHHHHHHHHHHHHH
Q 009816 459 AAIGPLLTGYISAT-SWTAVFTMLMAAALISGLLL 492 (524)
Q Consensus 459 ~~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~ 492 (524)
..++|.+.|++.+. ||+..|.+.++..+++.+..
T Consensus 163 ~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~ 197 (500)
T PRK09584 163 SFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNF 197 (500)
T ss_pred HHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999987 99999998776555554433
No 134
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.43 E-value=8.5e-13 Score=137.27 Aligned_cols=141 Identities=18% Similarity=0.182 Sum_probs=120.8
Q ss_pred HhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHH
Q 009816 112 LGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVA 191 (524)
Q Consensus 112 ~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~ 191 (524)
..+...+..++..++.++.|+++||+|||++++++.++.+++.++.+++ ++...+++.+++.|++.+..++...+
T Consensus 597 ~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~-----~s~~~ll~~~~l~g~~~~~~~~~~~a 671 (742)
T TIGR01299 597 IYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFG-----NSESAMIALLCLFGGLSIAAWNALDV 671 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH-----ccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455667789999999999999999999999999999999999888886 67777888889999888888999999
Q ss_pred HHhhccccccccceehhhhhhhhhHHHHHHHHHHHhhhcCchhHHHHhHHHHHHHHHHHHHhcCCCC
Q 009816 192 VVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALLTYGWGWSFVVPGLIIAFVGLIVFLFLPVNP 258 (524)
Q Consensus 192 ~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~ 258 (524)
+++|++|.++|++++|+......+|.++||++++.+...+...+|++.+++.++.++ +..++||+.
T Consensus 672 ~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~~~~pf~i~a~~lll~~l-l~~~LPET~ 737 (742)
T TIGR01299 672 LTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGITKAAPILFASAALACGGL-LALKLPDTR 737 (742)
T ss_pred HHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH-HHHhCCCCc
Confidence 999999999999999999999999999999999988766667788887776666544 445667754
No 135
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.41 E-value=3.3e-12 Score=129.82 Aligned_cols=150 Identities=11% Similarity=-0.051 Sum_probs=110.5
Q ss_pred hhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHH-HhccccccchhHHHHHHHHHHHHHhhhcchhh
Q 009816 110 ALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSL-YGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPS 188 (524)
Q Consensus 110 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~-~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~ 188 (524)
.+.++..+...++..++.+++|+++||+|||+.+..+.++..++... .... ..++...+++.+++.|++.+.....
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~g~ 362 (490)
T PRK10642 286 DHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILI---NSNVIGLIFAGLLMLAVILNCFTGV 362 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH---hCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 56677778889999999999999999999999988877654433322 1111 0146777888899999887777777
Q ss_pred HHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhhh--cCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCC
Q 009816 189 VVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALLT--YGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGT 263 (524)
Q Consensus 189 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~--~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (524)
...++.|.+|++.|+.++++......++..++|.+.+++.+ .+|+.+++...+++++. ++..+++||+|++..+
T Consensus 363 ~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~-~~~~~~~pes~~~~~~ 438 (490)
T PRK10642 363 MASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIG-LITGVTMKETANRPLK 438 (490)
T ss_pred HHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHH-HHHHHHhccccCCCCC
Confidence 78888999999999999997555455666788888887763 35787777666655555 4445567999886543
No 136
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.40 E-value=1.4e-11 Score=116.62 Aligned_cols=175 Identities=19% Similarity=0.243 Sum_probs=155.4
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHH
Q 009816 307 GVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYC 386 (524)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~ 386 (524)
.++.+.++.|......+.....+|...+| +|.|...+|...+.+..+..++.++...+.||+.||+.+.....++
T Consensus 14 ~l~aLa~~~F~igttEfv~~gLLp~iA~d-----l~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lF 88 (394)
T COG2814 14 ALLALALAAFAIGTTEFVPVGLLPPIAAD-----LGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALF 88 (394)
T ss_pred HHHHHHHHHHHHHhHHHHHHhchHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHH
Confidence 35567777888888889999999999999 5999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhh
Q 009816 387 AIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLT 466 (524)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~ 466 (524)
.++.++..+ .++++..++.=++.|+..+..++.......+.+|+ ++|+++.++...-..++.++|.+++
T Consensus 89 i~~n~l~al---Ap~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp--------~~~~~Aiaiv~~G~tlA~v~GvPLG 157 (394)
T COG2814 89 IVSNLLSAL---APSFAVLLLARALAGLAHGVFWSIAAALAARLVPP--------GKRGRALALVFTGLTLATVLGVPLG 157 (394)
T ss_pred HHHHHHHHH---hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc--------cchhhHHHHHHHHHHHHHHHhccHH
Confidence 888877765 46788888888999999999999999999999984 6779999999999999999999999
Q ss_pred Hhhccc-ChhHHHHHHHHHHHHHHHHHHHHHH
Q 009816 467 GYISAT-SWTAVFTMLMAAALISGLLLTRLVV 497 (524)
Q Consensus 467 g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (524)
.++-|. ||+.+|...+++.+++.+......+
T Consensus 158 t~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 158 TFLGQLFGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999 9999999999988887766654433
No 137
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.40 E-value=1.6e-11 Score=121.33 Aligned_cols=169 Identities=14% Similarity=0.055 Sum_probs=136.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHH
Q 009816 309 APFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAI 388 (524)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~ 388 (524)
+......++.....+....+++.|+++. .|+++.+.|+..+...+...+.+++.|+++||++||+.+..+..+..+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~ 88 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQ----LGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAA 88 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH----hCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHH
Confidence 4455666777778888888899888776 799999999999999999999999999999999999999888888777
Q ss_pred HHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHh
Q 009816 389 PALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGY 468 (524)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~ 468 (524)
..+.... .++.+...+..++.|++.+...+...+.+.+..| ++.++++.|+.+....+|..+||.+.++
T Consensus 89 ~~~~~~~---~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~--------~~~~~~a~~~~~~~~~~g~~ig~~l~g~ 157 (400)
T PRK11646 89 GFATMAI---AHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIR--------PHQRGRFFSLLMMQDSAGAVIGALLGSW 157 (400)
T ss_pred HHHHHHH---hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7666543 2455666666777787776666777777777776 3668999999999999999999999999
Q ss_pred hcccChhHHHHHHHHHHHHHHHHH
Q 009816 469 ISATSWTAVFTMLMAAALISGLLL 492 (524)
Q Consensus 469 l~~~~~~~~~~~~~~~~~~~~~~~ 492 (524)
+.+.+|+..|++.+...++..++.
T Consensus 158 l~~~g~~~~f~~~~~~~~~~~i~~ 181 (400)
T PRK11646 158 LLQYDFRLVCATGAVLFVLAAAFN 181 (400)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHH
Confidence 986699999988877666554443
No 138
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.40 E-value=9.3e-12 Score=125.47 Aligned_cols=178 Identities=13% Similarity=0.063 Sum_probs=138.2
Q ss_pred cCCC-cHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhh-hhhhHHHHH
Q 009816 304 KIPG-VAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDR-LDARAITAA 381 (524)
Q Consensus 304 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~~~~ 381 (524)
++|+ ++.+....++..+.+++...++|.|+++. +++|++..+++.+.+...++..++.+++|+++|| +|||+.+..
T Consensus 7 ~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~--~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~ 84 (475)
T TIGR00924 7 GHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQ--AGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVL 84 (475)
T ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHH
Confidence 3444 44455566666788899999999999762 1158999999999999999999999999999999 899999999
Q ss_pred HHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhh
Q 009816 382 SFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAI 461 (524)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i 461 (524)
+..+.+++.+++.. ..+.+...+...+.|++.+...+.....+.+.+++++ ++.|+++.++.....++|..+
T Consensus 85 ~~~~~~~g~~~~~~---~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~-----~~~r~~~~~~~~~~~niG~~i 156 (475)
T TIGR00924 85 GGIVLMLGHFMLAM---SIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGD-----MPRRDGGFTLFYMSINIGSFI 156 (475)
T ss_pred HHHHHHHHHHHHHh---cccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCC-----cccccceehhHHHHHHHHHHH
Confidence 98888877666543 2334445556667788877777777788888776432 134677889999999999999
Q ss_pred hhhhhHhhccc-ChhHHHHHHHHHHHHHHHH
Q 009816 462 GPLLTGYISAT-SWTAVFTMLMAAALISGLL 491 (524)
Q Consensus 462 ~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~ 491 (524)
||.+.+++.+. +|+..|.+.++..+++.+.
T Consensus 157 g~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~ 187 (475)
T TIGR00924 157 SPLLAGVIAENYGYHVGFNLAAVGMVIGLLT 187 (475)
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHHHHHH
Confidence 99999999987 9999998887655554333
No 139
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.38 E-value=6e-12 Score=124.33 Aligned_cols=145 Identities=16% Similarity=0.155 Sum_probs=115.7
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQML 177 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l 177 (524)
+|+++ .+.+++.+...++..++.+++|+++||+|||+.+..+.+...+.......+ ++.+.+++.+++
T Consensus 247 ~~~~~-------~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~l 314 (393)
T PRK15011 247 LHLPE-------KLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMA-----HSPAILLGLQLL 314 (393)
T ss_pred cCCCH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH-----hhHHHHHHHHHH
Confidence 66665 788888888778888899999999999999998887766655555444444 677778889999
Q ss_pred HHHhhhcchhhHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhhh-cCchhHHHHhHHHHHHHHHHHHHhcCC
Q 009816 178 AGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALLT-YGWGWSFVVPGLIIAFVGLIVFLFLPV 256 (524)
Q Consensus 178 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~-~gwr~~f~~~~~~~~~~~~~~~~~~~~ 256 (524)
.+++.+...+....+..|.+|+ +|++++++++....+|..++|.+++.+.+ +||+..|++.+++.++. ++..++.||
T Consensus 315 ~~~~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~ 392 (393)
T PRK15011 315 NAIYIGILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIAT-LFCLLRIKD 392 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH-HHHHHhhcC
Confidence 8888777777777888998874 69999999999999999999999999884 69999999877666655 444445553
No 140
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.38 E-value=8.2e-12 Score=124.57 Aligned_cols=181 Identities=19% Similarity=0.145 Sum_probs=137.7
Q ss_pred hhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhh
Q 009816 297 VGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDAR 376 (524)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~ 376 (524)
.+++...+++.++...+..++..+........+|.+.++. +.++.+.|++.+...++..+++++.|+++||++||
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~ 82 (417)
T PRK10489 8 LDLSLLKTHPAFRAVFIARFISIFGLGLLGVAVPVQIQMM-----TGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRK 82 (417)
T ss_pred HHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH-----HCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCc
Confidence 3445556788888888888888888777788899988875 77999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH--hhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhh
Q 009816 377 AITAASFMYCAIPALFFYR--SYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGT 454 (524)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 454 (524)
+.+..+..+.+++...+.. .....+.+...+..++.|++.+...+.....+.+.++ ++.++++.++.+..
T Consensus 83 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~ 154 (417)
T PRK10489 83 KLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVG--------RENLMQAGAITMLT 154 (417)
T ss_pred eEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccC--------HHHHHHHHHHHHHH
Confidence 9887766655554433321 1123345555566666777766666666677777665 36678999999999
Q ss_pred hhhhhhhhhhhhHhhccc-ChhHHHHHHHHHHHHHHH
Q 009816 455 GSVGAAIGPLLTGYISAT-SWTAVFTMLMAAALISGL 490 (524)
Q Consensus 455 ~~~g~~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~ 490 (524)
..+|..+||.+.+.+.+. +|++.+++.++..+++.+
T Consensus 155 ~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~ 191 (417)
T PRK10489 155 VRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLL 191 (417)
T ss_pred HhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 999999999999999887 888888777665554443
No 141
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.38 E-value=8.5e-12 Score=124.17 Aligned_cols=141 Identities=19% Similarity=0.212 Sum_probs=122.7
Q ss_pred hHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHH
Q 009816 111 LLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVV 190 (524)
Q Consensus 111 ~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~ 190 (524)
..+.+.+.+.++..++.+.+|++.||+|||+.+..+.++..++.+...+. ++.+.+++.+++.|++.+...+...
T Consensus 259 ~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~ 333 (408)
T PRK09874 259 ISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFV-----QTPLQLGILRFLLGAADGALLPAVQ 333 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHh-----ccHHHHHHHHHHHHhhhHhhHHHHH
Confidence 45667777888889999999999999999999999988888777777765 7788888999999999999999999
Q ss_pred HHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHHhcCC
Q 009816 191 AVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFLFLPV 256 (524)
Q Consensus 191 ~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~ 256 (524)
+++.+..|+++|++.+++......+|..+||.+++.+. .+||++.|++.+++.++..+..++..++
T Consensus 334 ~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~~~ 400 (408)
T PRK09874 334 TLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSLRR 400 (408)
T ss_pred HHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999988 5799999999988888776666655443
No 142
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.36 E-value=7.7e-12 Score=124.03 Aligned_cols=137 Identities=17% Similarity=0.141 Sum_probs=117.6
Q ss_pred HhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHH
Q 009816 112 LGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVA 191 (524)
Q Consensus 112 ~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~ 191 (524)
.++..+.+.++..++.++.|++.||+|+|+.+..+..+.+++.++.... ++.+.+++.+++.|++.+...+....
T Consensus 251 ~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~G~~~~~~~~~~~~ 325 (399)
T PRK05122 251 AALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLA-----PSPWMALIGAALTGFGFSLVFPALGV 325 (399)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHh-----ccHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 3556678888999999999999999999999999988888888777775 77788888999999999988888888
Q ss_pred HHhhccccccccceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHHh
Q 009816 192 VVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFLF 253 (524)
Q Consensus 192 ~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~ 253 (524)
.+.|.+|+++|+++.+++.....+|..+++++.+.+. ..||++.|++.+++.++..+..++.
T Consensus 326 ~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (399)
T PRK05122 326 EAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLL 388 (399)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 8889999999999999999999999999988888887 5799999999888777665544444
No 143
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.36 E-value=3.4e-11 Score=119.19 Aligned_cols=174 Identities=19% Similarity=0.115 Sum_probs=122.7
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHH
Q 009816 305 IPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFM 384 (524)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~ 384 (524)
+|.+|.+....++..........++|.|+++. +|.++.+.+.+.+...++..+++++.|+++||+|||+.+..+..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~ 76 (396)
T TIGR00882 1 NTNFWMFGLFFFLYFFIMSAYFPFFPIWLHDV----NGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIIS 76 (396)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 46788888888888888888889999999887 79999999999999999999999999999999999999876655
Q ss_pred HHHHHHHHHHHh--hcc---hhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhh
Q 009816 385 YCAIPALFFYRS--YGH---LSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGA 459 (524)
Q Consensus 385 ~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 459 (524)
...+........ .+. .......+..++.|++.+...+.......+.. +.++...|.......+|.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----------~~~~~~~g~~~~~~~~g~ 146 (396)
T TIGR00882 77 GLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS----------RNSNFEYGKARMFGCVGW 146 (396)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh----------hhcccccchhhhhcccHH
Confidence 544333222111 010 11111222334455555555554444433321 112345566677788999
Q ss_pred hhhhhhhHhhcccChhHHHHHHHHHHHHHHHHH
Q 009816 460 AIGPLLTGYISATSWTAVFTMLMAAALISGLLL 492 (524)
Q Consensus 460 ~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~ 492 (524)
+++|.+.|.+.+.+|+..|++.+++.++..++.
T Consensus 147 ~~g~~~~g~l~~~~~~~~f~~~~~~~~~~~~~~ 179 (396)
T TIGR00882 147 ALCASIAGILFSIDPQIVFWLGSGFALILMLLL 179 (396)
T ss_pred HHHHHHHhhhhccCchHHHHHHHHHHHHHHHHH
Confidence 999999998887799999988877766655443
No 144
>PRK10504 putative transporter; Provisional
Probab=99.36 E-value=3.2e-11 Score=122.43 Aligned_cols=171 Identities=16% Similarity=0.146 Sum_probs=138.0
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHH
Q 009816 307 GVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYC 386 (524)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~ 386 (524)
.++...+..++..........++|.+.++ +|.++.+.+++.+...++..++.++.|+++||+|||+.+..+..+.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-----~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~ 85 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTALPSMAQS-----LGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLF 85 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHH-----hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHH
Confidence 45666777777777777888899999987 5999999999999999999999999999999999999988777666
Q ss_pred HHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhh
Q 009816 387 AIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLT 466 (524)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~ 466 (524)
.++.+.... ..+.+..++..++.|++.+...+.....+.+.+| ++.++++.|+.+....+|..++|.+.
T Consensus 86 ~~~~~~~~~---~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~g~~~g~~~~ 154 (471)
T PRK10504 86 TLGSLFCAL---SGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVP--------REQYMAAMTFVTLPGQVGPLLGPALG 154 (471)
T ss_pred HHHHHHHHH---hCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcC--------HHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 665554432 2455666677788898888888888888888776 36679999999999999999999999
Q ss_pred Hhhccc-ChhHHHHHHHHHHHHHHHHHH
Q 009816 467 GYISAT-SWTAVFTMLMAAALISGLLLT 493 (524)
Q Consensus 467 g~l~~~-~~~~~~~~~~~~~~~~~~~~~ 493 (524)
|.+.+. +|++.|.+......++.+...
T Consensus 155 g~l~~~~gw~~~f~~~~~~~~l~~~~~~ 182 (471)
T PRK10504 155 GLLVEYASWHWIFLINIPVGIIGAIATL 182 (471)
T ss_pred HHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence 999887 999999887766665554443
No 145
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.35 E-value=5e-10 Score=108.55 Aligned_cols=313 Identities=16% Similarity=0.157 Sum_probs=201.6
Q ss_pred HHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHHHHhh
Q 009816 116 DLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVAVVGN 195 (524)
Q Consensus 116 ~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~ 195 (524)
.++-...+.+++++.+.+.|+.|.|+.++++......-.+..-+ .|-+.+++...+.|+|.+..+..--.++++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~------~N~y~~yfssallG~Gaallw~GqG~ylt~ 129 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF------PNSYYLYFSSALLGFGAALLWTGQGGYLTS 129 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh------cchHHHHHHHHHhhhhHHheecccceehhh
Confidence 57777888899999999999999999999999999888888877 788889999999999999999999999999
Q ss_pred ccccccccceehhhhhhhhhHHHHHHHHHHHhhhc---------Cch-hH-------HHHhHHHHHHHHH-----HHHHh
Q 009816 196 WFGKSKRGLIMGIWNAHTSIGNITGSLVASALLTY---------GWG-WS-------FVVPGLIIAFVGL-----IVFLF 253 (524)
Q Consensus 196 ~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~---------gwr-~~-------f~~~~~~~~~~~~-----~~~~~ 253 (524)
..+++.+.+..++..+....+.++|..+-..+.+. +-+ .. +.+.-+..++..+ ....+
T Consensus 130 ~st~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~ 209 (461)
T KOG3098|consen 130 NSTRETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDF 209 (461)
T ss_pred cCChhhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheee
Confidence 99999999999999999999998887665544321 111 11 1111111111111 11111
Q ss_pred cCCCCCCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009816 254 LPVNPESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYV 333 (524)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (524)
+|...... . . +. . +....+......+.+++|+...+....+..++.........|..+
T Consensus 210 ~p~~~~~~-~-~------~~---~-----------~~~~~~~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i 267 (461)
T KOG3098|consen 210 LPSKDVVN-C-K------SS---S-----------ETSFSELLKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCI 267 (461)
T ss_pred cCccchhh-h-h------hh---c-----------cccHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhh
Confidence 11110000 0 0 00 0 001112334456677888877776666665555555555555544
Q ss_pred hhcccCCCCC-ChhhhhhHHHHHHHHHHhhhHHHHHHHhhh---hhhHHHHHHHHHHHHHHHHHHHhhcc----------
Q 009816 334 SHTAVDGKYL-SSEMAGNLSTLFDVGGVLGGILAGHISDRL---DARAITAASFMYCAIPALFFYRSYGH---------- 399 (524)
Q Consensus 334 ~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~---~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 399 (524)
..... .+. +....+......+++.+++....+.+.+|. |++..+.++..+..+..++.....+.
T Consensus 268 ~ft~~--~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~ 345 (461)
T KOG3098|consen 268 SFTRK--LGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSP 345 (461)
T ss_pred hhhhh--ccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCccc
Confidence 33200 122 233344555667777888888888887765 56666666666665555555433221
Q ss_pred -----hhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhH
Q 009816 400 -----LSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTG 467 (524)
Q Consensus 400 -----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g 467 (524)
++.....++.++.|++-+......+..+...++ +.+..+.++...-..++..++-....
T Consensus 346 ~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~---------~~~~~~fsi~kfyq~~~s~v~~f~~~ 409 (461)
T KOG3098|consen 346 PLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLYP---------DDRAQAFSLFKFYQSVASCVAFFFSP 409 (461)
T ss_pred ccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHhc---------CchHHHHHHHHHHHHHHHHHHhhhhh
Confidence 124566777888999999989899999988885 34456666666666666655554443
No 146
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.35 E-value=6.2e-12 Score=125.05 Aligned_cols=143 Identities=24% Similarity=0.239 Sum_probs=116.8
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQML 177 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l 177 (524)
.|+++ .+.+++.+.+.++..++.++.|++.||+|||+.+..+.+...++.++.... ++.+.+.+..++
T Consensus 250 ~g~s~-------~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 317 (406)
T PRK11551 250 QGLSR-------SQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAA-----PSFAGMLLAGFA 317 (406)
T ss_pred CCCCh-------hhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhc-----CcHHHHHHHHHH
Confidence 56666 788999999999999999999999999999999888777766666666654 677777778888
Q ss_pred HHHhhhcchhhHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhhhc--CchhHHHHhHHHHHHHHHHHHH
Q 009816 178 AGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALLTY--GWGWSFVVPGLIIAFVGLIVFL 252 (524)
Q Consensus 178 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~--gwr~~f~~~~~~~~~~~~~~~~ 252 (524)
.|++.+...+...+++.|.+|+++|++++++......+|..++|.+++.+.+. +|...++......++..+..+.
T Consensus 318 ~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (406)
T PRK11551 318 AGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALL 394 (406)
T ss_pred HHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHH
Confidence 89888778888899999999999999999999999999999999999998743 5666666655555444343333
No 147
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.35 E-value=4.3e-11 Score=120.69 Aligned_cols=171 Identities=13% Similarity=0.008 Sum_probs=135.3
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhh-hhhhHHHHHHHHH
Q 009816 307 GVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDR-LDARAITAASFMY 385 (524)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~~~~~~~~ 385 (524)
.++..+...++..+.+++...+++.|+++. +|++..+++++...+.....+..+++|+++|| +|||+++..+.++
T Consensus 15 ~~~~~~~~~~~er~~~y~~~~~l~~yl~~~----lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~ 90 (489)
T PRK10207 15 PFFMIFFVELWERFGYYGVQGILAVFFVKQ----LGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIV 90 (489)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----cCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHH
Confidence 355566667777888999999999999887 89999999988888887777888899999999 9999999999998
Q ss_pred HHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhh
Q 009816 386 CAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLL 465 (524)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~ 465 (524)
..++.+...... ......++...+.+++.+...+...+.+.+.+|+++ +.++.+.++.....++|..++|.+
T Consensus 91 ~~~g~~~~~~~~--~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~------~~~~~~~~~~~~~~nig~~~g~~l 162 (489)
T PRK10207 91 LAIGYFMTGMSL--LKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKD------PRLDGAFTLFYMSINIGSLISLSL 162 (489)
T ss_pred HHHHHHHHHHhc--cchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCc------hhhhcchhHHHHHHHHHHHHHHHH
Confidence 888876665421 112223355666788888888888888888887542 245667888999999999999999
Q ss_pred hHhhccc-ChhHHHHHHHHHHHHHH
Q 009816 466 TGYISAT-SWTAVFTMLMAAALISG 489 (524)
Q Consensus 466 ~g~l~~~-~~~~~~~~~~~~~~~~~ 489 (524)
.|++.+. ||++.|++.++..+++.
T Consensus 163 ~g~l~~~~gw~~~F~i~~i~~~~~~ 187 (489)
T PRK10207 163 APVIADKFGYSVTYNLCGAGLIIAL 187 (489)
T ss_pred HHHHHHhhChHHHHHHHHHHHHHHH
Confidence 9999988 99999988655444333
No 148
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.35 E-value=6.1e-11 Score=120.73 Aligned_cols=171 Identities=15% Similarity=0.104 Sum_probs=137.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHH
Q 009816 309 APFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAI 388 (524)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~ 388 (524)
..+++..++...-.......+|.+..+ +|.+..+.+++.+.+.++..++.++.|+++||+|||+.+..+..+..+
T Consensus 9 ~~~~~~~~~~~ld~tiv~~a~p~i~~~-----l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~ 83 (495)
T PRK14995 9 VIIVLVYIPVAIDATVLHVAAPTLSMT-----LGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGL 83 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 344555566666666777788988877 599999999999999999999999999999999999999998888877
Q ss_pred HHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHh
Q 009816 389 PALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGY 468 (524)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~ 468 (524)
+.+.... .++.+..++.-++.|++.+...+.....+.+.+++ ++.|+++.|+......+|..+||.+.|+
T Consensus 84 ~~~~~~~---a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~-------~~~r~~~~g~~~~~~~~g~~~gp~lgg~ 153 (495)
T PRK14995 84 ASLAAAF---SPTASWLIATRALLAIGAAMIVPATLAGIRATFTE-------EKQRNMALGVWAAVGSGGAAFGPLVGGI 153 (495)
T ss_pred HHHHHHH---cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7766654 35667777777888888877777666666666543 3678999999999999999999999999
Q ss_pred hccc-ChhHHHHHHHHHHHHHHHHHHH
Q 009816 469 ISAT-SWTAVFTMLMAAALISGLLLTR 494 (524)
Q Consensus 469 l~~~-~~~~~~~~~~~~~~~~~~~~~~ 494 (524)
+.+. +|++.|++...+.++..++...
T Consensus 154 l~~~~gwr~~f~i~~~~~~~~~~l~~~ 180 (495)
T PRK14995 154 LLEHFYWGSVFLINVPIVLVVMGLTAR 180 (495)
T ss_pred hhccCChHHHHHHHHHHHHHHHHHHHH
Confidence 9988 9999999887766665554443
No 149
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.34 E-value=1.8e-11 Score=125.15 Aligned_cols=138 Identities=13% Similarity=0.151 Sum_probs=107.1
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQML 177 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l 177 (524)
+|++. .+.+++.+.+.++..++.++.|+++||+|||+++..+.++..+..++.... ...+.+.+.+..++
T Consensus 306 ~g~~~-------~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 375 (496)
T PRK03893 306 LGYDP-------HTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAI---GGANVWVLGLLLFF 375 (496)
T ss_pred cCCCH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhc---cccHHHHHHHHHHH
Confidence 67666 899999999999999999999999999999999888877766655444332 01344445455555
Q ss_pred HHHhhhcchhhHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHH
Q 009816 178 AGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAF 245 (524)
Q Consensus 178 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~ 245 (524)
.++......+....++.|.+|+++|++++++......+|..+||.+++.+. ++||+..+...+....+
T Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~~ 444 (496)
T PRK03893 376 QQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLTF 444 (496)
T ss_pred HHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHHH
Confidence 554434445667788999999999999999999999999999999999998 57899888665544433
No 150
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.34 E-value=4.7e-11 Score=117.52 Aligned_cols=170 Identities=16% Similarity=0.188 Sum_probs=135.9
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHH
Q 009816 306 PGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMY 385 (524)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~ 385 (524)
+.++.+....++...........+|.+.++ +|.+..+.++..+...++..+++++.|++.||+|||+.+..+..+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 77 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHD-----VGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVAL 77 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHH-----cCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHH
Confidence 445566667777777777777888887776 599999999999999999999999999999999999999988888
Q ss_pred HHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhh
Q 009816 386 CAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLL 465 (524)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~ 465 (524)
.+++.+.... .++.+..++..++.|++.+...+.....+.+..+ ++.++++.++......++..++|.+
T Consensus 78 ~~~~~~l~~~---~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~g~~~g~~l 146 (382)
T PRK10091 78 CVIGNAMFTL---SSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIK--------PGKVTAAVAGMVSGMTVANLLGIPL 146 (382)
T ss_pred HHHHHHHHHH---hCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCC--------hHHhhHHHHHHHHHHHHHHHHhccH
Confidence 8777665543 3566777777788888877777666666666554 3557888999888889999999999
Q ss_pred hHhhccc-ChhHHHHHHHHHHHHHHHH
Q 009816 466 TGYISAT-SWTAVFTMLMAAALISGLL 491 (524)
Q Consensus 466 ~g~l~~~-~~~~~~~~~~~~~~~~~~~ 491 (524)
.+++.+. +|+..|.+.+++.++..+.
T Consensus 147 ~~~l~~~~gwr~~f~~~~~~~~~~~~~ 173 (382)
T PRK10091 147 GTYLSQEFSWRYTFLLIAVFNIAVLAS 173 (382)
T ss_pred HHHHhhhccHHHHHHHHHHHHHHHHHH
Confidence 9998887 9999999888766554443
No 151
>PRK03699 putative transporter; Provisional
Probab=99.33 E-value=6.3e-11 Score=117.14 Aligned_cols=167 Identities=14% Similarity=0.093 Sum_probs=126.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHH
Q 009816 309 APFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAI 388 (524)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~ 388 (524)
+...+..++...........+|.+.++ +|.|..+.+++.+...++..++.++.|++.||+|||+.+..+..+..+
T Consensus 10 ~~~~~~~~~~~~~~~~~g~~~~~i~~~-----~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i 84 (394)
T PRK03699 10 WISFLSYALTGALVIVTGMVMGPIAEY-----FNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMIL 84 (394)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHH-----hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 334444444444455566677777766 699999999999999999999999999999999999998888777766
Q ss_pred HHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHh
Q 009816 389 PALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGY 468 (524)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~ 468 (524)
+.++... .++.+..++..++.|++.+...+.....+.+..+ ++.|+.+.+..+....+++.++|.+.+.
T Consensus 85 ~~~l~~~---~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~--------~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 153 (394)
T PRK03699 85 AVAGLMF---SHSLALFSIAMFVLGVVSGITMSIGTFLITHVYE--------GKQRGSRLLFTDSFFSMAGMIFPIIAAY 153 (394)
T ss_pred HHHHHHH---cchHHHHHHHHHHHHHhhHhhccchhHHhhhhcc--------cchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6655543 2455666667778888777777767777777765 3567888888888888999999999888
Q ss_pred hccc--ChhHHHHHHHHHHHHHHHH
Q 009816 469 ISAT--SWTAVFTMLMAAALISGLL 491 (524)
Q Consensus 469 l~~~--~~~~~~~~~~~~~~~~~~~ 491 (524)
+.+. +|+..|.+.+++.++..++
T Consensus 154 l~~~~~gw~~~f~~~~~~~~~~~~~ 178 (394)
T PRK03699 154 LLARSIEWYWVYACIGLVYVAIFIL 178 (394)
T ss_pred HHhccccHHHHHHHHHHHHHHHHHH
Confidence 7653 8999998877766554433
No 152
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.32 E-value=3.9e-11 Score=118.39 Aligned_cols=158 Identities=22% Similarity=0.287 Sum_probs=127.0
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcc
Q 009816 320 LVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGH 399 (524)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (524)
.........+|.+.++ +|.++.+.+++.+...++..++.++.|++.||+|||+.+..+..+..++.+.... .
T Consensus 19 ~~~~~~~~~~p~~~~~-----~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~---~ 90 (385)
T TIGR00710 19 LGIDMYLPAFPEIAAD-----LSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLAL---S 90 (385)
T ss_pred HHHHHhcccHHHHHHH-----hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHH---H
Confidence 3344444556766666 5999999999999999999999999999999999999998887777766665543 2
Q ss_pred hhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-ChhHHH
Q 009816 400 LSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-SWTAVF 478 (524)
Q Consensus 400 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~~ 478 (524)
++.+...+..++.|++.+...+.....+.+..+ ++.|+++.++.+....+|..++|.+.+.+.+. +|+..+
T Consensus 91 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~ 162 (385)
T TIGR00710 91 NNIETLLVLRFVQAFGASAGSVISQALVRDIYP--------GEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIF 162 (385)
T ss_pred ccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcC--------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH
Confidence 456666777788888888888888888888776 36689999999999999999999999998887 899999
Q ss_pred HHHHHHHHHHHHHHH
Q 009816 479 TMLMAAALISGLLLT 493 (524)
Q Consensus 479 ~~~~~~~~~~~~~~~ 493 (524)
++.+++.++..+...
T Consensus 163 ~~~~~~~~~~~~~~~ 177 (385)
T TIGR00710 163 AFLSLAGILLSALIF 177 (385)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888777665555443
No 153
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.32 E-value=1e-10 Score=114.54 Aligned_cols=165 Identities=19% Similarity=0.258 Sum_probs=121.3
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHH
Q 009816 308 VAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCA 387 (524)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~ 387 (524)
++...+..+......+....++|.++++. +|+++.+.+++.+...++..++.++.|+++||+|||+.+..+..+..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 78 (366)
T TIGR00886 3 LFFSWFGFFLSFSVWFAFSPLAVQMIKDD----LGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLA 78 (366)
T ss_pred hHHHHHHHHHHHHHHHHhHHhhhHHHHHH----hCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHH
Confidence 45556666666666777778888766666 79999999999999999999999999999999999999988888877
Q ss_pred HHHHHHHHhhcch-hHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhh
Q 009816 388 IPALFFYRSYGHL-SLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLT 466 (524)
Q Consensus 388 ~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~ 466 (524)
++.+..... . +.+..++..++.|++.+ .+......+.+..+ ++.|+++.++......+|..+++.+.
T Consensus 79 i~~~~~~~~---~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~--------~~~r~~~~~~~~~~~~~g~~~~~~i~ 146 (366)
T TIGR00886 79 IPCLWAGLA---VQSYSVLLLLRLFIGIAGG-SFASCMPWISFFFP--------KKIQGTALGLAAGWGNMGGGVAQFVM 146 (366)
T ss_pred HHHHHHHHH---hhhHHHHHHHHHHHHHhch-hhHhHHHHHHHhcC--------HhhhhHHHHHHHHHhHHHHHHHHHHH
Confidence 776665432 3 55666666677777643 44555666666665 36678999998877778887777776
Q ss_pred Hhhcc----------c-ChhHHHHH-HHHHHHHH
Q 009816 467 GYISA----------T-SWTAVFTM-LMAAALIS 488 (524)
Q Consensus 467 g~l~~----------~-~~~~~~~~-~~~~~~~~ 488 (524)
+.+.. . +|++.|++ .+++..+.
T Consensus 147 ~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 180 (366)
T TIGR00886 147 PPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLLP 180 (366)
T ss_pred HHHHHHHHhcccccccccccchhHHHHHHHHHHH
Confidence 65543 1 68888844 34443333
No 154
>PRK03545 putative arabinose transporter; Provisional
Probab=99.32 E-value=5.3e-11 Score=117.58 Aligned_cols=151 Identities=12% Similarity=0.104 Sum_probs=121.7
Q ss_pred HHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHH
Q 009816 326 LYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALN 405 (524)
Q Consensus 326 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (524)
...+|.+.++ +|.++.+.++..+...++..++.+..|++.||+|||+.+..+..+..++.+.... .++.+..
T Consensus 29 ~~~~~~l~~~-----~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~---~~~~~~l 100 (390)
T PRK03545 29 VGLLSDIAQS-----FHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSAL---AWNFTVL 100 (390)
T ss_pred HcchHHHHhH-----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHH---hccHHHH
Confidence 3446766665 6999999999999999999999999999999999999999888777777655543 3456666
Q ss_pred HHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-ChhHHHHHHHHH
Q 009816 406 IALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-SWTAVFTMLMAA 484 (524)
Q Consensus 406 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~~~~~~~~ 484 (524)
++..++.|++.+...+.....+.+..+ ++.|+++.|+......+|..++|++.+.+.+. +|+..|++.+++
T Consensus 101 ~~~r~~~G~~~~~~~~~~~~~i~~~~~--------~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~ 172 (390)
T PRK03545 101 LISRIGIAFAHAIFWSITASLAIRVAP--------AGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGG 172 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCC--------hhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHH
Confidence 677777888777777777777777776 36679999999999999999999999998887 999999998877
Q ss_pred HHHHHHHH
Q 009816 485 ALISGLLL 492 (524)
Q Consensus 485 ~~~~~~~~ 492 (524)
.++..+..
T Consensus 173 ~~l~~~~~ 180 (390)
T PRK03545 173 ALITLLLL 180 (390)
T ss_pred HHHHHHHH
Confidence 66554433
No 155
>PRK12382 putative transporter; Provisional
Probab=99.32 E-value=1.5e-11 Score=121.72 Aligned_cols=138 Identities=17% Similarity=0.133 Sum_probs=119.8
Q ss_pred HhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHH
Q 009816 112 LGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVA 191 (524)
Q Consensus 112 ~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~ 191 (524)
.++..+.+.++..+++++.|++.||+|+|+.+..+..+.+++.++..+. ++.+.+++..++.|++.+...+...+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~g~~~~~~~~~~~~ 325 (392)
T PRK12382 251 AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLA-----PTAWVALAGAALTGAGCSLIFPALGV 325 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHc-----ccHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 3556677888889999999999999999999999998888888887775 77888888999999999888888888
Q ss_pred HHhhccccccccceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHHhc
Q 009816 192 VVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFLFL 254 (524)
Q Consensus 192 ~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~~ 254 (524)
.+.+.+|+++|+++.++.+....+|..++|.+.+.+. +.||++.|.+.+++.++..++.++..
T Consensus 326 ~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 389 (392)
T PRK12382 326 EVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILSF 389 (392)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhhc
Confidence 8999999999999999999999999999999999988 57999999998887777655555443
No 156
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.32 E-value=1.2e-10 Score=114.95 Aligned_cols=150 Identities=15% Similarity=0.193 Sum_probs=124.4
Q ss_pred HHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhH
Q 009816 323 YTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSL 402 (524)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (524)
+.....+|.+.++ +|.++.+.++..+...++..+++++.|++.||+|||+.+..+..+.++..+.... .++.
T Consensus 37 ~~~~~~l~~~~~~-----~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~---~~~~ 108 (394)
T PRK10213 37 FLPVSLLTPMAQD-----LGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSF---ANSF 108 (394)
T ss_pred HHHHhhHHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHH---HChH
Confidence 3444467777666 6999999999999999999999999999999999999998888888776655543 3566
Q ss_pred HHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-ChhHHHHHH
Q 009816 403 ALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-SWTAVFTML 481 (524)
Q Consensus 403 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~~~~~ 481 (524)
+..++.-++.|++.+...+.....+.+.++ ++.++.+.++.....++|..++|.+.+++.+. +|+..|++.
T Consensus 109 ~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~--------~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~ 180 (394)
T PRK10213 109 SLLLIGRACLGLALGGFWAMSASLTMRLVP--------PRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAA 180 (394)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHcC--------HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHH
Confidence 777777788899988888888888888876 36689999999999999999999999999887 999999887
Q ss_pred HHHHHHH
Q 009816 482 MAAALIS 488 (524)
Q Consensus 482 ~~~~~~~ 488 (524)
+++.+++
T Consensus 181 ~~l~~~~ 187 (394)
T PRK10213 181 AVMGVLC 187 (394)
T ss_pred HHHHHHH
Confidence 7655443
No 157
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.32 E-value=5.1e-11 Score=119.50 Aligned_cols=157 Identities=20% Similarity=0.271 Sum_probs=116.8
Q ss_pred HHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhc-chhHH
Q 009816 325 FLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYG-HLSLA 403 (524)
Q Consensus 325 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 403 (524)
+....| ++++ .|.++.+.++..+...++..++.++.|+++||++||+.+..+..+..++.+....... ..+..
T Consensus 46 ~~~~~p-~~~~-----~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (438)
T TIGR00712 46 FALAMP-YLVE-----QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIA 119 (438)
T ss_pred HHhhhH-HHHH-----cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHH
Confidence 344555 4444 4899999999999999999999999999999999999888777776666555432211 12344
Q ss_pred HHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhcc-c-ChhHHHHHH
Q 009816 404 LNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISA-T-SWTAVFTML 481 (524)
Q Consensus 404 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~-~~~~~~~~~ 481 (524)
...+..++.|++.+..++.....+.+.+|+ +.|++++|+.+....+++.+++.+.+...+ . +|+..|++.
T Consensus 120 ~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~--------~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~ 191 (438)
T TIGR00712 120 IMFVLLFLNGWFQGMGWPPCGRTMVHWWSQ--------SERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFP 191 (438)
T ss_pred HHHHHHHHHHHHhhcchHHHHHHHHHhcCc--------ccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHH
Confidence 445556677877777777777777777763 668999999999999999999988776544 3 899999998
Q ss_pred HHHHHHHHHHHHHH
Q 009816 482 MAAALISGLLLTRL 495 (524)
Q Consensus 482 ~~~~~~~~~~~~~~ 495 (524)
+++.++..++...+
T Consensus 192 ~~~~~i~~~~~~~~ 205 (438)
T TIGR00712 192 AICAIIVALFAFAM 205 (438)
T ss_pred HHHHHHHHHHHHHh
Confidence 88776655544433
No 158
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.31 E-value=6.5e-11 Score=120.72 Aligned_cols=167 Identities=19% Similarity=0.172 Sum_probs=135.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHH
Q 009816 311 FALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPA 390 (524)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 390 (524)
+.+..++...........+|.+.++ +|.+..+.+++.+...++..++.++.|++.||+|||+.+..+..+..++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~p~~~~~-----~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 81 (485)
T TIGR00711 7 LMLGTFMAVLDSTIVNVAIPTIAGD-----LGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGS 81 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-----cCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 3444455555555666778887777 59999999999999999999999999999999999999988888777766
Q ss_pred HHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhc
Q 009816 391 LFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYIS 470 (524)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~ 470 (524)
++... .++.+..++..++.|++.+...+.....+.+.+|+ +.|+++.++......+|..++|.+.+++.
T Consensus 82 ~~~~~---~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~--------~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 150 (485)
T TIGR00711 82 LLCGV---APNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPP--------EKRGRAMAIWGLTVLVAPALGPTLGGWII 150 (485)
T ss_pred HHHhC---cCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCH--------HHHHHHHHHHHHHHHHHhhhhhccHhHhc
Confidence 65543 35667777788888998888888888888888873 67799999999999999999999999999
Q ss_pred cc-ChhHHHHHHHHHHHHHHHHHH
Q 009816 471 AT-SWTAVFTMLMAAALISGLLLT 493 (524)
Q Consensus 471 ~~-~~~~~~~~~~~~~~~~~~~~~ 493 (524)
+. +|++.|++.+.+.++..++..
T Consensus 151 ~~~~w~~~f~~~~~~~~~~~~~~~ 174 (485)
T TIGR00711 151 ENYHWRWIFLINVPIGIIVVVVAF 174 (485)
T ss_pred cCcCceehhhhhhHHHHHHHHHHH
Confidence 87 999999888776665554444
No 159
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.31 E-value=1.1e-11 Score=121.79 Aligned_cols=162 Identities=25% Similarity=0.293 Sum_probs=126.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHH
Q 009816 316 FFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYR 395 (524)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~ 395 (524)
++.......+....|.+.++ +|.+..+.+++.+...++..++.++.|+++||+|||+.+..+..+..++.++...
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~-----~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 79 (379)
T TIGR00881 5 AAYYLVRKNFALAMPYLVEE-----IGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGF 79 (379)
T ss_pred hHHHHhHHhhhhhhHHHHHH-----hCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHH
Confidence 34444455556666765554 6999999999999999999999999999999999999998888877777666554
Q ss_pred hhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhh-hhHhhccc-C
Q 009816 396 SYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPL-LTGYISAT-S 473 (524)
Q Consensus 396 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~-~~g~l~~~-~ 473 (524)
. .+.+..++..++.|++.+...+.....+.+..++ +.|+++.++.+....+|..++|. +.+.+.+. +
T Consensus 80 ~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--------~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 148 (379)
T TIGR00881 80 S---TSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSR--------SERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYS 148 (379)
T ss_pred h---hhHHHHHHHHHHHHhhccccCCchHHHHHHhcCH--------hhheeeEeehhccchhHHHHHHHHHHHHHHhcCC
Confidence 2 4566677777888888888888888888888773 56788899999999999999994 55555555 8
Q ss_pred hhHHHHHHHHHHHHHHHHHH
Q 009816 474 WTAVFTMLMAAALISGLLLT 493 (524)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~ 493 (524)
|+..|++.+++.++..++..
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~ 168 (379)
T TIGR00881 149 WHWVFIVPGIIAIIVSLICF 168 (379)
T ss_pred chhHHHHHHHHHHHHHHHHh
Confidence 99888887776665544444
No 160
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.31 E-value=6.8e-11 Score=116.17 Aligned_cols=158 Identities=16% Similarity=0.075 Sum_probs=120.2
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcc
Q 009816 320 LVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGH 399 (524)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (524)
...+......|.+.++ +|.+..+.+++.+...++..+++++.|+++||+|||+.+..+..+..++.+.... .
T Consensus 17 ~~~~~~~~~~~~~~~~-----~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~---~ 88 (377)
T TIGR00890 17 GYVYTWTLLAPPLGRY-----FGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAI---A 88 (377)
T ss_pred hHHhhhhhHHHHHHHH-----hCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHH---H
Confidence 3344555667766665 6999999999999999999999999999999999999998888777776655543 2
Q ss_pred hhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-ChhHHH
Q 009816 400 LSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-SWTAVF 478 (524)
Q Consensus 400 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~~ 478 (524)
++.+..++...+.|++.+..++.......+..+ +.|+++.++......+|..+++++.+.+.+. +|+..|
T Consensus 89 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f 159 (377)
T TIGR00890 89 DSLAALYLTYGLASAGVGIAYGIALNTAVKWFP---------DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAF 159 (377)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC---------cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHH
Confidence 456666666667788777666666555555543 4478999999988889988877777766665 899999
Q ss_pred HHHHHHHHHHHHHHHH
Q 009816 479 TMLMAAALISGLLLTR 494 (524)
Q Consensus 479 ~~~~~~~~~~~~~~~~ 494 (524)
.+.++..++..+....
T Consensus 160 ~~~~~~~~~~~~~~~~ 175 (377)
T TIGR00890 160 IYMGIIFLLVIVLGAF 175 (377)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9888777665555443
No 161
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.31 E-value=1.3e-10 Score=115.14 Aligned_cols=165 Identities=12% Similarity=0.080 Sum_probs=121.8
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHH
Q 009816 307 GVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYC 386 (524)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~ 386 (524)
.+....++.++..........+++.++++ +|.++.+.++..+...++..+++++.|++.||++||+.+..+..+.
T Consensus 14 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-----~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~ 88 (402)
T TIGR00897 14 NLLWGYIGVVVFMTGDGLEQGWLSPFLKA-----LGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLW 88 (402)
T ss_pred hhhHHHHHHHHHHHhhhhHHHhHHHHHHH-----hCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHH
Confidence 45556666677777766677788888876 5999999999999999999999999999999999999998888777
Q ss_pred HHHHHHHHHh-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhh-hhhhh
Q 009816 387 AIPALFFYRS-YGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGA-AIGPL 464 (524)
Q Consensus 387 ~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~-~i~~~ 464 (524)
.++.+..... ....+.+..+...++.|++.+...+.....+.+..+ +++|++++|+.+....+|. .++|.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~--------~~~~g~~~g~~~~~~~~g~~~~g~~ 160 (402)
T TIGR00897 89 CVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTK--------QDNLSSAVGWFWAVYSIGIGVFGSY 160 (402)
T ss_pred HHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCC--------HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7665433211 112344555555666677766655555556666655 3678999999999999986 57899
Q ss_pred hhHhhccc-ChhHHHHHHHHH
Q 009816 465 LTGYISAT-SWTAVFTMLMAA 484 (524)
Q Consensus 465 ~~g~l~~~-~~~~~~~~~~~~ 484 (524)
+.+++.+. +++..++.....
T Consensus 161 ~~~~l~~~~g~~~~~~~~~~~ 181 (402)
T TIGR00897 161 YSSYAIPAFGEMNTLWSALAF 181 (402)
T ss_pred HHHhcccccchHHHHHHHHHH
Confidence 88888876 765555544433
No 162
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.30 E-value=1.3e-10 Score=114.93 Aligned_cols=165 Identities=18% Similarity=0.234 Sum_probs=127.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHH
Q 009816 313 LCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALF 392 (524)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 392 (524)
+..+............+|.+.++ +|.+..+.++..+...++..++.++.|+++||+|||+.+..+.....++...
T Consensus 10 ~~~~~~~~~~~~~~~~lp~~~~~-----~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~ 84 (392)
T PRK10473 10 ALVLLYPAGIDMYLVGLPRIAAD-----LNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLL 84 (392)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHH-----hCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHH
Confidence 33344444444555677777766 5999999999999999999999999999999999999988887777666655
Q ss_pred HHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc
Q 009816 393 FYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT 472 (524)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 472 (524)
... ..+.+..++..++.|++.+...+.....+.+..+ ++.|+++.++.+....++..++|.+.+.+.+.
T Consensus 85 ~~~---~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~--------~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~ 153 (392)
T PRK10473 85 CSL---AETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLD--------DRRRAKVLSLLNGITCIIPVLAPVLGHLIMLK 153 (392)
T ss_pred HHH---hCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcC--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 543 2345555666677788877777777778877776 36789999999999999999999999888766
Q ss_pred -ChhHHHHHHHHHHHHHHHHHH
Q 009816 473 -SWTAVFTMLMAAALISGLLLT 493 (524)
Q Consensus 473 -~~~~~~~~~~~~~~~~~~~~~ 493 (524)
+|+..+++.+++.++..++..
T Consensus 154 ~g~~~~~~~~~~~~~i~~~~~~ 175 (392)
T PRK10473 154 FPWQSLFYTMAAMGILVLLLSL 175 (392)
T ss_pred cChHHHHHHHHHHHHHHHHHHH
Confidence 899999888877666555543
No 163
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.30 E-value=1.4e-11 Score=119.81 Aligned_cols=135 Identities=27% Similarity=0.374 Sum_probs=125.6
Q ss_pred hhHhHHHHHHHHHHHhhhhhhhcccccCCchh-hHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhh
Q 009816 110 ALLGELDLAFLSIYAGGMFFSGHLGDRLDLRI-FLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPS 188 (524)
Q Consensus 110 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~-~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~ 188 (524)
.+.++..+...++..++.++.|++.||+|||+ .+..+.++..++.++.... ++.+.+.+..++.|++.+...+.
T Consensus 211 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~~ 285 (352)
T cd06174 211 AEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALA-----PSLALLLVALLLLGFGLGFAFPA 285 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh-----ccHHHHHHHHHHHHHHHhccchh
Confidence 88999999999999999999999999999999 9999999999999988886 77889999999999999999999
Q ss_pred HHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHH
Q 009816 189 VVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLI 249 (524)
Q Consensus 189 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~ 249 (524)
..+++.|..|+++|++.+++......+|..++|.+.+.+. ..+|+..|++.+++.++..+.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~ 347 (352)
T cd06174 286 LLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALL 347 (352)
T ss_pred HHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999988 679999999988887776443
No 164
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.30 E-value=3.6e-11 Score=118.92 Aligned_cols=156 Identities=21% Similarity=0.226 Sum_probs=126.1
Q ss_pred HHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchh
Q 009816 322 AYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLS 401 (524)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (524)
........|.+.++ +|.+..+.+++.+...++..++.++.|++.||+|||+.+..+..+..++....... .+
T Consensus 10 ~~~~~~~~~~~~~~-----~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~---~~ 81 (399)
T TIGR00893 10 RANLSFAAPMLQED-----LGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFA---GA 81 (399)
T ss_pred HHhhhHhHHHHHHh-----hCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHH---cC
Confidence 34444555654444 69999999999999999999999999999999999999888877776666555432 36
Q ss_pred HHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-ChhHHHHH
Q 009816 402 LALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-SWTAVFTM 480 (524)
Q Consensus 402 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~~~~ 480 (524)
.+..++..++.|++.+...+.....+.+..|+ +.|+++.++.+....+|..++|.+.+.+.+. +|+..|++
T Consensus 82 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~--------~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~ 153 (399)
T TIGR00893 82 YVSLYILRVLLGAAEAPFFPGIILIVASWFPA--------SERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFII 153 (399)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCH--------HHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHH
Confidence 67777778888998888888888888888773 6789999999999999999999999988777 99999988
Q ss_pred HHHHHHHHHHHHH
Q 009816 481 LMAAALISGLLLT 493 (524)
Q Consensus 481 ~~~~~~~~~~~~~ 493 (524)
.+++.++..++..
T Consensus 154 ~~~~~~~~~~~~~ 166 (399)
T TIGR00893 154 EGVLGIIWGVLWL 166 (399)
T ss_pred HHHHHHHHHHHhh
Confidence 8777665554443
No 165
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.29 E-value=1.8e-11 Score=124.41 Aligned_cols=154 Identities=19% Similarity=0.186 Sum_probs=116.2
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccch------hHHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVH------SFYYY 171 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~------~~~~~ 171 (524)
+|++. .+.++......++..++.+++|+++||+|||+.+.++.++.+++.++.++......+ +...+
T Consensus 314 ~g~~~-------~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (481)
T TIGR00879 314 AGVST-------DHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAI 386 (481)
T ss_pred cCCCc-------hHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHH
Confidence 66655 677888889999999999999999999999999999988887777766521000011 33333
Q ss_pred HHHHHHHHHhhhcchhhHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHH
Q 009816 172 LVVQMLAGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIV 250 (524)
Q Consensus 172 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~ 250 (524)
....++.+.......+....++.|.+|+++|+.++++......+|.+++|.+.+.+. +.+|++.|++.++++++..++.
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~ 466 (481)
T TIGR00879 387 VFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFV 466 (481)
T ss_pred HHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHH
Confidence 333333333323344666777899999999999999999999999999999988877 5799999999888888877776
Q ss_pred HHhcCCCC
Q 009816 251 FLFLPVNP 258 (524)
Q Consensus 251 ~~~~~~~~ 258 (524)
.++.||++
T Consensus 467 ~~~~~~~~ 474 (481)
T TIGR00879 467 YFFLPETK 474 (481)
T ss_pred heecccCC
Confidence 66666543
No 166
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.29 E-value=1.1e-10 Score=115.99 Aligned_cols=161 Identities=14% Similarity=0.140 Sum_probs=125.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHH
Q 009816 311 FALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPA 390 (524)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 390 (524)
..+..+...+.........|.+.++ +|.+..+.+++.+...++..++.++.|+++||+|||+.+..+..+.+++.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~l~~~-----~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~ 91 (405)
T TIGR00891 17 AWLGWLLDAFDFFLVALVLAEVAGE-----FGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGT 91 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-----hCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 3344444444455555666666555 69999999999999999999999999999999999999988877777666
Q ss_pred HHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhc
Q 009816 391 LFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYIS 470 (524)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~ 470 (524)
+.... .++.+..++..++.|++.+..++.....+.+..++ +.|+++.++.+....+|..+++.+.+.+.
T Consensus 92 ~~~~~---~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~--------~~~~~~~~~~~~~~~~g~~~~~~l~~~l~ 160 (405)
T TIGR00891 92 LACGF---APGYITMFIARLVIGIGMGGEYGSSAAYVIESWPK--------HLRNKASGLLISGYAVGAVVAAQVYSLVV 160 (405)
T ss_pred HHHHH---hccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCCh--------hhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55543 24566667777888988888888888888888773 66799999999999999999999998887
Q ss_pred cc-C--hhHHHHHHHHHHHH
Q 009816 471 AT-S--WTAVFTMLMAAALI 487 (524)
Q Consensus 471 ~~-~--~~~~~~~~~~~~~~ 487 (524)
+. + |+..|.+.++..++
T Consensus 161 ~~~~~~w~~~f~~~~~~~~~ 180 (405)
T TIGR00891 161 PVWGDGWRALFFISILPIIF 180 (405)
T ss_pred HhcCccHHHHHHHHHHHHHH
Confidence 65 4 88888765544433
No 167
>TIGR00895 2A0115 benzoate transport.
Probab=99.29 E-value=5.6e-11 Score=117.76 Aligned_cols=156 Identities=21% Similarity=0.268 Sum_probs=124.3
Q ss_pred HHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchh
Q 009816 322 AYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLS 401 (524)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (524)
........|.+.++ +|.++.+.+++.+...++.+++.++.|+++||++||+.+..+..+..++.++... ..+
T Consensus 33 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~---~~~ 104 (398)
T TIGR00895 33 LAAMGFAAPAISAE-----WGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCAL---ATN 104 (398)
T ss_pred HHHHHhhHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHH---ccc
Confidence 34444556666655 6999999999999999999999999999999999999988887777666555543 245
Q ss_pred HHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-ChhHHHHH
Q 009816 402 LALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-SWTAVFTM 480 (524)
Q Consensus 402 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~~~~ 480 (524)
.+..++..++.|++.+...+.....+.+..++ +.|+++.++.+....+|..+++.+.+++.+. +|+..+++
T Consensus 105 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--------~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~ 176 (398)
T TIGR00895 105 VTQLLILRFLAGLGLGGLMPNLNALVSEYAPK--------RFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYV 176 (398)
T ss_pred hHHHHHHHHHHhcccccchhhHHHHHHHHcCH--------HhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhh
Confidence 56667777888988888888888888888763 6679999999999999999999999999887 89888888
Q ss_pred HHHHHHHHHHHHH
Q 009816 481 LMAAALISGLLLT 493 (524)
Q Consensus 481 ~~~~~~~~~~~~~ 493 (524)
.+++.++..++..
T Consensus 177 ~~~~~~~~~~~~~ 189 (398)
T TIGR00895 177 GGIAPLLLLLLLM 189 (398)
T ss_pred hhhHHHHHHHHHH
Confidence 7655554444433
No 168
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.28 E-value=2.4e-10 Score=113.05 Aligned_cols=168 Identities=13% Similarity=0.076 Sum_probs=128.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHH
Q 009816 309 APFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAI 388 (524)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~ 388 (524)
+.++...+...+........+|.+.++ +|.+..+.+++.+...++..++++..|++.||+|+|+.+..+..+.++
T Consensus 6 ~~~~~~f~~~G~~~~~~~~l~~~~~~~-----~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~ 80 (410)
T TIGR00885 6 ALITSLFALWGFANDITNPMVPQFQQA-----FTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYAL 80 (410)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHH-----hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHH
Confidence 344444455555554555677776555 699999999999999999999999999999999999999999988888
Q ss_pred HHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHh
Q 009816 389 PALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGY 468 (524)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~ 468 (524)
+.++........+.+..++..++.|++.+...+.....+.+..+ ++.+++..++.+....+|..++|.+.+.
T Consensus 81 g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~lG~~~g~~i~~~ 152 (410)
T TIGR00885 81 GAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGP--------ESTATRRLNLAQSFNPFGSIIGMVVAQQ 152 (410)
T ss_pred HHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCC--------HhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77665332223456667777888899888888877777777665 3557888999999999999999999887
Q ss_pred hccc---------------------------ChhHHHHHHHHHHHHHH
Q 009816 469 ISAT---------------------------SWTAVFTMLMAAALISG 489 (524)
Q Consensus 469 l~~~---------------------------~~~~~~~~~~~~~~~~~ 489 (524)
+... +|+.+|.+.+++.++..
T Consensus 153 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~ 200 (410)
T TIGR00885 153 LILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVA 200 (410)
T ss_pred HHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7421 47888877777655443
No 169
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.28 E-value=1.7e-10 Score=114.58 Aligned_cols=157 Identities=20% Similarity=0.145 Sum_probs=124.3
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcch
Q 009816 321 VAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHL 400 (524)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (524)
.........| .+++. +|++..+.+++.+...++..+++++.|++.||+|||+.+..+.++..++.+.... .+
T Consensus 23 d~~~~~~~~~-~l~~~----~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~---~~ 94 (412)
T TIGR02332 23 DRINIGFAGL-TMGKD----LGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMF---AT 94 (412)
T ss_pred hhhhHHHHHH-hhHhh----cCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHH---hc
Confidence 3344444555 44444 7999999999999999999999999999999999999998888777776666543 24
Q ss_pred hHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhcc------c-C
Q 009816 401 SLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISA------T-S 473 (524)
Q Consensus 401 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~------~-~ 473 (524)
+.+..++.-++.|++.+...+.....+.+.+| ++.|+++.|+.+....+|..+++.+.+++.+ . +
T Consensus 95 ~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~--------~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~g 166 (412)
T TIGR02332 95 GPESLYLLRILVGIAEAGFLPGILLYLTFWFP--------AYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKG 166 (412)
T ss_pred CHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcC--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccc
Confidence 56666777788899888888777777787777 3678999999999999999999999998863 2 8
Q ss_pred hhHHHHHHHHHHHHHHHHHH
Q 009816 474 WTAVFTMLMAAALISGLLLT 493 (524)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~ 493 (524)
|+..|++.++..++..++..
T Consensus 167 wr~~f~~~~~~~l~~~~~~~ 186 (412)
T TIGR02332 167 WQWLFLLEGFPSVILGVMTW 186 (412)
T ss_pred hhHHHHHHHHHHHHHHHHHh
Confidence 99999988777665544443
No 170
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.28 E-value=2.1e-10 Score=112.74 Aligned_cols=168 Identities=17% Similarity=0.187 Sum_probs=116.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHH-HHHHHH
Q 009816 313 LCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMY-CAIPAL 391 (524)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~-~~~~~~ 391 (524)
+..++...........+|.|+++. +|.++.+.+++.+...+...+.+++.|+++||+|||+.+...... ..+..+
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~----~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~ 79 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEE----VRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACL 79 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcc----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHH
Confidence 445666667777788899998776 799999999999999999999999999999999998876554333 333333
Q ss_pred HHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhcc
Q 009816 392 FFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISA 471 (524)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~ 471 (524)
.... .++.+..++..++.|.+.+...+.......+..+++ .+.++...+.......+|..++|.+.+++.+
T Consensus 80 ~~~~---~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~ 150 (375)
T TIGR00899 80 LFAW---NRNYFLLLVLGVLLSSFASTANPQLFALAREHADRT------GREAVMFSSVMRAQISLAWVIGPPLAFWLAL 150 (375)
T ss_pred HHHh---cchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhc------chhhHHHHHHHHHHHhHHHHHhhhHHHHHHH
Confidence 3322 234444444445555555555555545544444321 1222233677777788999999999999987
Q ss_pred c-ChhHHHHHHHHHHHHHHHHHH
Q 009816 472 T-SWTAVFTMLMAAALISGLLLT 493 (524)
Q Consensus 472 ~-~~~~~~~~~~~~~~~~~~~~~ 493 (524)
. +|+..|++.+.+.++..++..
T Consensus 151 ~~~~~~~f~~~~~~~~~~~~~~~ 173 (375)
T TIGR00899 151 GFGFTVMFLTAALAFVLCGVLVW 173 (375)
T ss_pred hcccHHHHHHHHHHHHHHHHHHH
Confidence 7 999999988877665555444
No 171
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.28 E-value=3.7e-10 Score=114.23 Aligned_cols=155 Identities=20% Similarity=0.239 Sum_probs=110.0
Q ss_pred HHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchh
Q 009816 322 AYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLS 401 (524)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (524)
.+.....+|.+.++ +|++..+.+++.+...++..++.++.|+++||+|||+.+..+.++..++.++... ..+
T Consensus 52 ~~~~~~~~~~l~~~-----~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~---~~s 123 (476)
T PLN00028 52 TFAAAPLLPIIRDN-----LNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSL---VSS 123 (476)
T ss_pred HHHHHHHHHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH---hcC
Confidence 33444455556555 6999999999988899999999999999999999999888877766665554433 234
Q ss_pred HHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhcc----------
Q 009816 402 LALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISA---------- 471 (524)
Q Consensus 402 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~---------- 471 (524)
.+..++..++.|++.+.. ......+.+.++ ++.||++.|+.+....+|..+++.+.+.+.+
T Consensus 124 ~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~--------~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~ 194 (476)
T PLN00028 124 ATGFIAVRFFIGFSLATF-VSCQYWMSTMFN--------GKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSF 194 (476)
T ss_pred HHHHHHHHHHHHHHHHhh-HHHHHHHHHhcC--------hhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch
Confidence 455555566677766543 334445666665 3677999999988878888877766654421
Q ss_pred cChhHHHHHHHHHHHHHHHHHH
Q 009816 472 TSWTAVFTMLMAAALISGLLLT 493 (524)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~ 493 (524)
.+|+..|++.+++.++..++..
T Consensus 195 ~gWr~~f~i~g~l~l~~~l~~~ 216 (476)
T PLN00028 195 TAWRIAFFVPGLLHIIMGILVL 216 (476)
T ss_pred hhhHHHHHHHHHHHHHHHHHHH
Confidence 2799999988887766555444
No 172
>PRK11043 putative transporter; Provisional
Probab=99.28 E-value=1.9e-10 Score=114.15 Aligned_cols=161 Identities=23% Similarity=0.269 Sum_probs=118.5
Q ss_pred HHHHHHHHHHHHHHHH--HhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHH
Q 009816 317 FAKLVAYTFLYWLPFY--VSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFY 394 (524)
Q Consensus 317 ~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~ 394 (524)
.....+.....+.|.+ +++. +|.++.+.++..+...++..++.++.|+++||++||+.+..+..+..++.+...
T Consensus 14 ~~~~~~~~~~~~~p~~~~i~~~----~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~ 89 (401)
T PRK11043 14 LSMLGFLATDMYLPAFKAIQAD----LQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGML 89 (401)
T ss_pred HHHHHHHHHHHHHhhHHHHHHH----HCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHH
Confidence 3334444444455544 3333 699999999999999999999999999999999999998888777666655544
Q ss_pred HhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-C
Q 009816 395 RSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-S 473 (524)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~ 473 (524)
. ..+.+...+..++.|++.+...+.....+.+.+++ +.++...+..+....++..++|.+.+++.+. +
T Consensus 90 ~---~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g 158 (401)
T PRK11043 90 W---VESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPA--------QKANRVFATIMPLVALSPALAPLLGAWLLNHFG 158 (401)
T ss_pred H---hcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCc--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3 24555666666777777666655555666666653 4567778888888889999999999999887 9
Q ss_pred hhHHHHHHHHHHHHHHHHH
Q 009816 474 WTAVFTMLMAAALISGLLL 492 (524)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~ 492 (524)
|+..|++.+++.++..+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~ 177 (401)
T PRK11043 159 WQAIFATLFAITLLLILPT 177 (401)
T ss_pred hHHHHHHHHHHHHHHHHHH
Confidence 9999988877666554443
No 173
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.27 E-value=4.6e-11 Score=117.55 Aligned_cols=135 Identities=16% Similarity=0.022 Sum_probs=120.9
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQML 177 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l 177 (524)
+|.++ .+.|++.+...++..+..++.+++.||+|+|+.+.++.++.++..++.+++ ++.+.+++.+++
T Consensus 235 ~g~s~-------~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~q~l 302 (382)
T TIGR00902 235 AGISA-------SATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAI-----EAFPLIFLLQIL 302 (382)
T ss_pred CCCCH-------hHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhH-----hhHHHHHHHHHH
Confidence 67776 889999999999999999999999999999999999999999999999886 999999999999
Q ss_pred HHHhhhcchhhHHHHHhhccccccccceehhhh-hhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHH
Q 009816 178 AGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIWN-AHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFV 246 (524)
Q Consensus 178 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~ 246 (524)
.|++.+...+....++.+. |+++|++..+++. ...++|..+||.++|.+. ++|+ ..|++.+++.++.
T Consensus 303 ~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~ 371 (382)
T TIGR00902 303 HCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAA 371 (382)
T ss_pred HHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHH
Confidence 9999999999999999998 8889999999986 577899999999999998 4575 6677777766654
No 174
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=99.27 E-value=1.4e-10 Score=111.40 Aligned_cols=180 Identities=13% Similarity=0.158 Sum_probs=144.1
Q ss_pred HHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHH
Q 009816 300 IEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAIT 379 (524)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~ 379 (524)
.+++.+++...+.+...+..+......+++=-++++. +..+..-|......-.+.++.-++.+++.+|+|+.+++
T Consensus 365 ~~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled~-----~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~ 439 (618)
T KOG3762|consen 365 GKVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLEDL-----GGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVM 439 (618)
T ss_pred HHHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhhc-----CCcceeeeehhhhhccchHHHHHHHHHHHHHhccccee
Confidence 3667788887777777777777766777776667774 77777778777888888899999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhh-hhh
Q 009816 380 AASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTG-SVG 458 (524)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~-~~g 458 (524)
.++.....+-.+.+.. ..+.|..+.+-++-|+..+..+..+.+++....|+ +.++++.++..... .+|
T Consensus 440 ~lgLa~~~~Rf~~~S~---L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp--------~l~at~Q~l~~g~f~GlG 508 (618)
T KOG3762|consen 440 YLGLACNVGRFLYYSY---LQNPWMVLPIEILQGITHALIWAAIISYASHVAPP--------GLRATAQGLLQGIFHGLG 508 (618)
T ss_pred eehhhHHHHHHHHHHH---hcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCC--------cchHHHHHHHHHHhcccC
Confidence 8887777666655543 36778888889999999999999999999999885 66688888887654 789
Q ss_pred hhhhhhhhHhhccc-ChhHHHHHHHHHHHHHHHHHHHH
Q 009816 459 AAIGPLLTGYISAT-SWTAVFTMLMAAALISGLLLTRL 495 (524)
Q Consensus 459 ~~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~ 495 (524)
-.+|.+++|.+.+. +-+..|.++++.+++.+++...+
T Consensus 509 ~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~i 546 (618)
T KOG3762|consen 509 KGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISI 546 (618)
T ss_pred cchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999888 88888988888877766655443
No 175
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.27 E-value=1.6e-10 Score=113.95 Aligned_cols=161 Identities=11% Similarity=0.102 Sum_probs=125.9
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHH
Q 009816 305 IPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFM 384 (524)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~ 384 (524)
+|.++.+.+..++..+.........+....+ ++.++.+.+++.+.+.+...+..++.|+++||++||+++..+..
T Consensus 2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~ 76 (393)
T PRK11195 2 SKGFYAIMAAQFFSALADNALLFAAIALLKE-----LHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANG 76 (393)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHH
Confidence 3567777777777777665555656666655 58888899999999999999999999999999999999998888
Q ss_pred HHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhh
Q 009816 385 YCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPL 464 (524)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~ 464 (524)
+.+++.+..... .+. ++..++.|++.+...+...+.+.+.+|+ +.+++++|+.+....++..+||.
T Consensus 77 ~~~~~~~~~~~~---~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~--------~~~~~a~~~~~~~~~~~~~~Gp~ 142 (393)
T PRK11195 77 IKLLGCLLMLFG---IHP---LLAYGLVGIGAAAYSPAKYGILTELLPG--------EKLVKANGWMEGSTIAAILLGTV 142 (393)
T ss_pred HHHHHHHHHHHH---HHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCH--------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 776665544321 222 3445677888888889999999999884 67899999999999999999999
Q ss_pred hhHhhcccChhHHHHHHHHH
Q 009816 465 LTGYISATSWTAVFTMLMAA 484 (524)
Q Consensus 465 ~~g~l~~~~~~~~~~~~~~~ 484 (524)
++|++.+..+...+.+.+.+
T Consensus 143 lgG~l~~~~~~~~~~i~~~~ 162 (393)
T PRK11195 143 LGGALADPHAEAALAVCALI 162 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999887655555544433
No 176
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.25 E-value=4.1e-10 Score=112.80 Aligned_cols=156 Identities=17% Similarity=0.201 Sum_probs=123.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHH
Q 009816 311 FALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPA 390 (524)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 390 (524)
..+..+.............|.+.++ +|.++.+.++..+...++..++.++.|+++||+|||+.+..+..+..++.
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~i~~~-----~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~ 97 (426)
T PRK12307 23 AWLGYVFDGFDFMLIFYIMYLIKAD-----LGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGT 97 (426)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHH-----hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHH
Confidence 3333444444444555556655555 69999999999999999999999999999999999999998888887776
Q ss_pred HHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhc
Q 009816 391 LFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYIS 470 (524)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~ 470 (524)
+.... ..+.+...+.-++.|++.+..++.....+.+..++ +.|+++.++......+|..+++.+.+.+.
T Consensus 98 ~~~~~---~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~--------~~r~~~~~~~~~~~~lg~~~~~~l~~~l~ 166 (426)
T PRK12307 98 GLSGL---ASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPK--------HLKSKASAFLVSGFGIGNIIAAYFMPSFA 166 (426)
T ss_pred HHHHH---HhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCH--------hHhhHhhhHHHHHHhHHHHHHHHHHHHHc
Confidence 65543 24566677777888988888888888888888773 66799999999999999999999988888
Q ss_pred cc-ChhHHHHHHH
Q 009816 471 AT-SWTAVFTMLM 482 (524)
Q Consensus 471 ~~-~~~~~~~~~~ 482 (524)
+. +|+..|++..
T Consensus 167 ~~~~w~~~f~i~~ 179 (426)
T PRK12307 167 EAYGWRAAFFVGL 179 (426)
T ss_pred ccCCHHHHHHHHH
Confidence 77 9999887643
No 177
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.24 E-value=3.7e-10 Score=113.74 Aligned_cols=146 Identities=18% Similarity=0.223 Sum_probs=107.4
Q ss_pred CCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHHHhhhhhhh
Q 009816 342 YLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSY-GHLSLALNIALMFITGMFVNGPY 420 (524)
Q Consensus 342 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~ 420 (524)
|++..+.++..+...++..+++++.|+++||+|+|+.+..+.++.++..+...... ...+.+..++..++.|++.+..+
T Consensus 59 g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~ 138 (452)
T PRK11273 59 GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGW 138 (452)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccc
Confidence 89999999999999999999999999999999999999888877776666554321 11245555666677788877777
Q ss_pred HHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhh-hhhhhHhhc-ccChhHHHHHHHHHHHHHHHHHHHH
Q 009816 421 ALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAI-GPLLTGYIS-ATSWTAVFTMLMAAALISGLLLTRL 495 (524)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i-~~~~~g~l~-~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (524)
+.....+.+.++ ++.|+++.|+.+....+|+.+ +|.+...+. ..+|+..|++.+++.++..++..++
T Consensus 139 ~~~~~~~~~~~~--------~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~ 207 (452)
T PRK11273 139 PPCGRTMVHWWS--------QKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAM 207 (452)
T ss_pred hHHHHHHHHhCC--------hHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 766667777665 367899999998888888755 444332232 2389999988877666654444433
No 178
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.23 E-value=4.1e-10 Score=110.83 Aligned_cols=151 Identities=17% Similarity=0.186 Sum_probs=123.0
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHH
Q 009816 306 PGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMY 385 (524)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~ 385 (524)
+.++.+....++...........+|.+.++ +|.|..+.|++.+...++..+++++.|+++||+|||+.+..+..+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-----~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~ 80 (381)
T PRK03633 6 RPVLLLLCGLLLLTLAIAVLNTLVPLWLAQ-----EHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLI 80 (381)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 346667777777777778888999999987 599999999999999999999999999999999999999888877
Q ss_pred HHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhh
Q 009816 386 CAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLL 465 (524)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~ 465 (524)
..++...... .++.+..++..++.|++.+...+.....+.+..+ ++.|+++.+.......+|..+||.+
T Consensus 81 ~~~~~~~~~~---~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~g~~~g~~~ 149 (381)
T PRK03633 81 FAAGCAGLGL---MVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGT--------SRNRGRLLAAYMMVYYLGTVLGQLL 149 (381)
T ss_pred HHHHHHHHHH---hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--------HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7776655443 2456666777788888877776666666665554 3567999999999999999999999
Q ss_pred hHhhccc
Q 009816 466 TGYISAT 472 (524)
Q Consensus 466 ~g~l~~~ 472 (524)
.+.+.+.
T Consensus 150 ~~~l~~~ 156 (381)
T PRK03633 150 VSKVSTE 156 (381)
T ss_pred Hhccccc
Confidence 9988765
No 179
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.23 E-value=4.5e-11 Score=118.22 Aligned_cols=136 Identities=18% Similarity=0.101 Sum_probs=105.8
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHH--HHHhccccccchhHHHHHHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFT--SLYGIGYWGNVHSFYYYLVVQ 175 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~~~r 175 (524)
+|+++ .+.+++.+...++..++.++.|+++||+|||+.+..+..+..+.. ++.... ..++.+.+.+..
T Consensus 250 ~g~~~-------~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 319 (394)
T TIGR00883 250 LGLSA-------NSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALL---DSGSFTLFFFLV 319 (394)
T ss_pred cCCCh-------hHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHh---cCCchHHHHHHH
Confidence 56665 788899999999999999999999999999998775554443332 111121 024667777888
Q ss_pred HHHHHhhhcchhhHHHHHhhccccccccceehhh-hhhhhhHHHHHHHHHHHhh-hcC-chhHHHHhHHHH
Q 009816 176 MLAGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIW-NAHTSIGNITGSLVASALL-TYG-WGWSFVVPGLII 243 (524)
Q Consensus 176 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~~G~~ig~~l~~~l~-~~g-wr~~f~~~~~~~ 243 (524)
++.|++.+...+...+++.|.+|+++|+++.++. ..+..+|..++|.+++.+. +.| |++.++..++..
T Consensus 320 ~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~ 390 (394)
T TIGR00883 320 LGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALA 390 (394)
T ss_pred HHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHH
Confidence 8899988888899999999999999999999984 5666789999999999988 456 888777655433
No 180
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.23 E-value=2.7e-10 Score=112.02 Aligned_cols=154 Identities=16% Similarity=0.289 Sum_probs=124.6
Q ss_pred HHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHH
Q 009816 324 TFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLA 403 (524)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (524)
.....+|.+.++ +|.++.+.+++.+...++..++.++.|++.||+|||+.+..+..+..++...... .++.+
T Consensus 9 ~~~p~~~~~~~~-----~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~---~~~~~ 80 (377)
T PRK11102 9 MYLPALPVIAAD-----FGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACAL---AQTID 80 (377)
T ss_pred HHhccHHHHHHH-----hCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHH---HccHH
Confidence 344667777776 5999999999999999999999999999999999999998888777776666543 24555
Q ss_pred HHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-ChhHHHHHHH
Q 009816 404 LNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-SWTAVFTMLM 482 (524)
Q Consensus 404 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~~~~~~ 482 (524)
...+..++.|++.+...+.....+.+..+ ++.|+++.++.+....+|..++|.+.+.+.+. +|+..|++.+
T Consensus 81 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~ 152 (377)
T PRK11102 81 QLIYMRFLHGLAAAAASVVINALMRDMFP--------KEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLA 152 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcC--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHH
Confidence 66667778888887777777778877766 36689999999999999999999999999887 8999988887
Q ss_pred HHHHHHHHHHH
Q 009816 483 AAALISGLLLT 493 (524)
Q Consensus 483 ~~~~~~~~~~~ 493 (524)
++.++..++..
T Consensus 153 ~~~~~~~~~~~ 163 (377)
T PRK11102 153 LAAILAAALVF 163 (377)
T ss_pred HHHHHHHHHHH
Confidence 77666554443
No 181
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.23 E-value=2.4e-11 Score=122.16 Aligned_cols=139 Identities=14% Similarity=0.109 Sum_probs=113.0
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhcccccC--CchhhHHH--HHHHHHHHHHHHhccccccchhHHHHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGDRL--DLRIFLTV--GMVGTGLFTSLYGIGYWGNVHSFYYYLV 173 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~--Grr~~l~~--~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 173 (524)
+|++. .+.+++.+...++..+++++.|+++||. ++|+...+ +.++.+++.++...+ ++++.+++
T Consensus 271 ~g~s~-------~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~-----~~~~~~~i 338 (455)
T TIGR00892 271 KGVDE-------YEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALA-----GDYTGLVI 338 (455)
T ss_pred cCCCH-------HHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHh-----chHHHHHH
Confidence 56666 8899999999999999999999999984 34443333 334444445555554 78888899
Q ss_pred HHHHHHHhhhcchhhHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhhh-c-CchhHHHHhHHHHHHHHH
Q 009816 174 VQMLAGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALLT-Y-GWGWSFVVPGLIIAFVGL 248 (524)
Q Consensus 174 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~-~-gwr~~f~~~~~~~~~~~~ 248 (524)
.+++.|++.+...+...+++.|.+|++++++.++++.....+|..+||.+++.+.+ . +|++.|++.+++.++..+
T Consensus 339 ~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 339 YCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred HHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998874 4 599999998876655433
No 182
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.22 E-value=6.7e-10 Score=111.94 Aligned_cols=177 Identities=21% Similarity=0.196 Sum_probs=144.6
Q ss_pred HHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHH
Q 009816 301 EAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITA 380 (524)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~ 380 (524)
..+|+|.+..+.+...+.+++......-++-++.+. .-|+...+++.....+..++.++++|.++||++||+.++
T Consensus 5 aplr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~l-----t~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili 79 (524)
T PF05977_consen 5 APLRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQL-----TGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILI 79 (524)
T ss_pred ccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHH
Confidence 458899999999999999888888777777777664 678999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHH--hhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhh
Q 009816 381 ASFMYCAIPALFFYR--SYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVG 458 (524)
Q Consensus 381 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 458 (524)
.+-++.++....+.. .....+.+..++..++.|++.....+...+.+.+.+|. +....++++.+...++.
T Consensus 80 ~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~--------~~L~~A~al~s~~~nia 151 (524)
T PF05977_consen 80 LSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPK--------EDLPAANALNSISFNIA 151 (524)
T ss_pred HHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH--------hhHHHHHHHHHHHHHHH
Confidence 888776554443322 22344667778888889999888899999999999884 66788999999999999
Q ss_pred hhhhhhhhHhhccc-ChhHHHHHHHHHHHHHHH
Q 009816 459 AAIGPLLTGYISAT-SWTAVFTMLMAAALISGL 490 (524)
Q Consensus 459 ~~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~ 490 (524)
..+||.++|.+... |....|.+.++..++..+
T Consensus 152 r~iGPalgG~Lva~~G~~~~f~inalsfl~~i~ 184 (524)
T PF05977_consen 152 RIIGPALGGILVAFFGAAAAFLINALSFLISIL 184 (524)
T ss_pred HhccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999887 777888777766555433
No 183
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.22 E-value=6.2e-11 Score=119.90 Aligned_cols=144 Identities=15% Similarity=0.082 Sum_probs=106.8
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQML 177 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l 177 (524)
+|++. .+.++..+...++..++.+++|+++||+|||+.+.....+..++..+..+. ..++.+.+.+.+++
T Consensus 289 ~g~s~-------~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 358 (467)
T PRK09556 289 LGFSK-------EDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQ---HATSEYMYLASLFA 358 (467)
T ss_pred cCCCH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHH---hcCcHHHHHHHHHH
Confidence 67776 888999999999999999999999999999988766554444333222221 01466667778888
Q ss_pred HHHhhhcchhhHHHHHhhccccccccceehhhhhhhhh-HHHHHHHHHHHhhh-------------cCchhHHHHhHHHH
Q 009816 178 AGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSI-GNITGSLVASALLT-------------YGWGWSFVVPGLII 243 (524)
Q Consensus 178 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-G~~ig~~l~~~l~~-------------~gwr~~f~~~~~~~ 243 (524)
.|++.............|.+|+++|+.+.|+......+ |..++|.+.|.+.+ .||+..|++.+++.
T Consensus 359 ~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~ 438 (467)
T PRK09556 359 LGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAA 438 (467)
T ss_pred HHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHH
Confidence 88654333333346677999999999999999988886 77899988888876 47999999887666
Q ss_pred HHHHHHHH
Q 009816 244 AFVGLIVF 251 (524)
Q Consensus 244 ~~~~~~~~ 251 (524)
++..+..+
T Consensus 439 ~~~~~~~~ 446 (467)
T PRK09556 439 IGCICLMA 446 (467)
T ss_pred HHHHHHHH
Confidence 66544333
No 184
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.22 E-value=5.1e-10 Score=108.94 Aligned_cols=155 Identities=14% Similarity=0.009 Sum_probs=116.1
Q ss_pred HHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchh
Q 009816 322 AYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLS 401 (524)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (524)
...+...+|.+.++ +|.+..+.|++.+.+.++..++++..|+++||+|||+.+.......... ..... ...+
T Consensus 7 ~~~~~~~lp~i~~~-----~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~-~~~~~--~~~~ 78 (368)
T TIGR00903 7 WVTFSPVLSLVAED-----IDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAA-AGRLL--DPFN 78 (368)
T ss_pred HHHHHhhHHHHHHH-----hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHH-HHHHH--Hhcc
Confidence 34455667777776 6999999999999999999999999999999999888765443333332 22111 1135
Q ss_pred HHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-ChhHHHHH
Q 009816 402 LALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-SWTAVFTM 480 (524)
Q Consensus 402 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~~~~ 480 (524)
....++.-++.|++.+. .........+.+| ++.|+++.++.+....+|..+++.+.+++.+. +|+..|++
T Consensus 79 ~~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~--------~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~ 149 (368)
T TIGR00903 79 YEWLLACQLLAALGQPF-LLNAFAPAASQIR--------EERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIP 149 (368)
T ss_pred HHHHHHHHHHHHhHhHH-HHHHHHHHHHHcC--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHH
Confidence 66777777788887764 3444455567666 37789999999999999999999999999877 99999999
Q ss_pred HHHHHHHHHHHHH
Q 009816 481 LMAAALISGLLLT 493 (524)
Q Consensus 481 ~~~~~~~~~~~~~ 493 (524)
.+++.++..++..
T Consensus 150 ~~~l~~~~~~~~~ 162 (368)
T TIGR00903 150 IAAVAAAGIILVL 162 (368)
T ss_pred HHHHHHHHHHHHH
Confidence 8877766655444
No 185
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.21 E-value=6.3e-10 Score=110.13 Aligned_cols=157 Identities=14% Similarity=0.158 Sum_probs=117.1
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhc
Q 009816 319 KLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYG 398 (524)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (524)
..........+|.+.++ +|.++.+.++..+...++..++.++.|+++||+|||+.+..+.....++.+....
T Consensus 21 ~~~~~~~~p~~~~i~~~-----~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~--- 92 (394)
T PRK11652 21 QMAQTIYVPAIADMARD-----LNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALF--- 92 (394)
T ss_pred HHHHHHHhccHHHHHHH-----hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHH---
Confidence 33334444556777766 5999999999999999999999999999999999999988887776666555443
Q ss_pred chhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-ChhHH
Q 009816 399 HLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-SWTAV 477 (524)
Q Consensus 399 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~ 477 (524)
.++.+..++..++.|++.+...+.......+..+ .+.++.+.+..+....++..++|.+.+.+.+. +|+..
T Consensus 93 ~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~ 164 (394)
T PRK11652 93 AHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYE--------GTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRAC 164 (394)
T ss_pred HccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcC--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHH
Confidence 2455666666677777766555544444444443 35568888888888899999999999998887 99999
Q ss_pred HHHHHHHHHHHHHH
Q 009816 478 FTMLMAAALISGLL 491 (524)
Q Consensus 478 ~~~~~~~~~~~~~~ 491 (524)
|++.++..++..++
T Consensus 165 f~~~~~~~~~~~~~ 178 (394)
T PRK11652 165 YLFLLLLGAGVTFS 178 (394)
T ss_pred HHHHHHHHHHHHHH
Confidence 98877665544433
No 186
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.21 E-value=6.1e-10 Score=110.68 Aligned_cols=154 Identities=19% Similarity=0.228 Sum_probs=118.0
Q ss_pred HHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhH
Q 009816 323 YTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSL 402 (524)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (524)
..+...+|.+.++ +|.++.+.++..+...++..++.++.|+++||+|||+.+..+.....++.+.... .++.
T Consensus 30 ~~~~~~~~~~~~~-----~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~---~~~~ 101 (406)
T PRK15402 30 DMIQPGMLAVVED-----FNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILL---AQSI 101 (406)
T ss_pred hhHhcchHHHHHH-----hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH---HccH
Confidence 3344455655555 6999999999999999999999999999999999999988887777666655443 2455
Q ss_pred HHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-ChhHHHHHH
Q 009816 403 ALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-SWTAVFTML 481 (524)
Q Consensus 403 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~~~~~ 481 (524)
+..++..++.|++.+...+.....+.+.+++ +.+++..++......++..++|.+.+.+.+. +|+..|++.
T Consensus 102 ~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~--------~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~ 173 (406)
T PRK15402 102 EQFTLLRFLQGIGLCFIGAVGYAAIQESFEE--------ADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLF 173 (406)
T ss_pred HHHHHHHHHHHhHhhhHHHHHHHHHHHHhCh--------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHH
Confidence 5566667777877776666677777777663 5567778888877888999999999998887 899999888
Q ss_pred HHHHHHHHHHH
Q 009816 482 MAAALISGLLL 492 (524)
Q Consensus 482 ~~~~~~~~~~~ 492 (524)
+++.+++.+..
T Consensus 174 ~~~~~~~~~~~ 184 (406)
T PRK15402 174 AALAALSFFGL 184 (406)
T ss_pred HHHHHHHHHHH
Confidence 77766654433
No 187
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.20 E-value=6.9e-10 Score=109.61 Aligned_cols=147 Identities=16% Similarity=0.136 Sum_probs=119.2
Q ss_pred HHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhH
Q 009816 323 YTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSL 402 (524)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (524)
......+|...++ +|.|..+.++..+.+.++..++.++.|++.||+|||+++..+..+.+++.+.... .++.
T Consensus 26 ~~~~~~lp~i~~~-----~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~---a~~~ 97 (393)
T PRK09705 26 TSVGPLLPQLRQA-----SGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMREL---YPQS 97 (393)
T ss_pred hccchhHHHHHHH-----hCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHH---Ccch
Confidence 4455677777766 6999999999999999999999999999999999999999999999888877764 3456
Q ss_pred HHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc--ChhHHHHH
Q 009816 403 ALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT--SWTAVFTM 480 (524)
Q Consensus 403 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~--~~~~~~~~ 480 (524)
+..++.-++.|++.+...+.....+.+.++ +.|+.++|+.......|..+++.+.+++.++ +|+..+.+
T Consensus 98 ~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~---------~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~ 168 (393)
T PRK09705 98 ALLLSSALLGGVGIGIIQAVMPSVIKRRFQ---------QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAW 168 (393)
T ss_pred HHHHHHHHHHHhHHHHHhhhhhHHHHHHcc---------ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 666777788888888877777776666553 4468999999988889999999999988776 78887766
Q ss_pred HHHHHH
Q 009816 481 LMAAAL 486 (524)
Q Consensus 481 ~~~~~~ 486 (524)
.++..+
T Consensus 169 ~~~~~~ 174 (393)
T PRK09705 169 WALPAV 174 (393)
T ss_pred HHHHHH
Confidence 555443
No 188
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.20 E-value=1.9e-10 Score=117.15 Aligned_cols=148 Identities=14% Similarity=0.134 Sum_probs=108.9
Q ss_pred hhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhc-chhh
Q 009816 110 ALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQST-GWPS 188 (524)
Q Consensus 110 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~-~~~~ 188 (524)
...++......+...++.+++|+++||+|||++++.+.++.+++.++.+........+. ......++.+++.+. ..|.
T Consensus 306 ~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 384 (479)
T PRK10077 306 DIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGI-VALLSMLFYVAAFAMSWGPV 384 (479)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccH-HHHHHHHHHHHHHhccccch
Confidence 44556666778888899999999999999999999999998888777654311111111 222333444444443 3467
Q ss_pred HHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhh-------hcCchhHHHHhHHHHHHHHHHHHHhcCCCC
Q 009816 189 VVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL-------TYGWGWSFVVPGLIIAFVGLIVFLFLPVNP 258 (524)
Q Consensus 189 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-------~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~ 258 (524)
...++.|.+|+++|+.++|+......+|.++++.+.+.+. +++|++.|++.+++.++..++.+++.||++
T Consensus 385 ~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 461 (479)
T PRK10077 385 CWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETK 461 (479)
T ss_pred hHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHHHhccccCC
Confidence 7899999999999999999999999999988866655443 578999999988887777776666666653
No 189
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.18 E-value=1e-09 Score=109.03 Aligned_cols=150 Identities=20% Similarity=0.205 Sum_probs=114.9
Q ss_pred HHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHH
Q 009816 327 YWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNI 406 (524)
Q Consensus 327 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (524)
..+|...++ +|.+..+.++..+.+.++..++.++.|+++||+|||+.+..+..+..++.+.... .++.+..+
T Consensus 37 p~l~~i~~~-----~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~---a~~~~~l~ 108 (413)
T PRK15403 37 PGIINVVRD-----FNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLF---TTSMTQFL 108 (413)
T ss_pred cCHHHHHHH-----hCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHH---cCCHHHHH
Confidence 344444444 6999999999999999999999999999999999999998887777666655543 34566667
Q ss_pred HHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-ChhHHHHHHHHHH
Q 009816 407 ALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-SWTAVFTMLMAAA 485 (524)
Q Consensus 407 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~~~~~~~~~ 485 (524)
+.-++.|++.+...+.......+.++ ++.++++.++.+....++..++|.+.+.+.+. +|+..|++.++..
T Consensus 109 ~~r~l~Gi~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~ 180 (413)
T PRK15403 109 IARFIQGTSICFIATVGYVTVQEAFG--------QTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMG 180 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcC--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 77777787765544444455555555 35568889999999999999999999988877 9999999888776
Q ss_pred HHHHHHH
Q 009816 486 LISGLLL 492 (524)
Q Consensus 486 ~~~~~~~ 492 (524)
+++.+..
T Consensus 181 ~i~~~~~ 187 (413)
T PRK15403 181 LIAFVGL 187 (413)
T ss_pred HHHHHHH
Confidence 6655443
No 190
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=99.17 E-value=2.3e-08 Score=95.52 Aligned_cols=330 Identities=15% Similarity=0.135 Sum_probs=188.2
Q ss_pred HhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHH
Q 009816 112 LGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVA 191 (524)
Q Consensus 112 ~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~ 191 (524)
.+.+.-+-.+...+..+.+.++.+|+..+.=.....++..++.++.+++ ++.+.=+++-++.+++.|........
T Consensus 61 t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~-----~~v~~~l~Gv~las~ssg~GE~tfL~ 135 (402)
T PF02487_consen 61 TGAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFS-----PSVWVRLLGVVLASLSSGLGEVTFLS 135 (402)
T ss_pred chHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeec-----cchhHHHHHHHHHhhhhhhhHHHHHH
Confidence 4667777778888888889999999886555566667788889999987 88888888999999999988877777
Q ss_pred HHhhccccccccceehhhhhhhhhHHHHHHHHHHHhhhc--CchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCcccc
Q 009816 192 VVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALLTY--GWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNEED 269 (524)
Q Consensus 192 ~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~--gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (524)
+ +..+++ ...+-+..+.+.+.++|+..-..+... +-|..+++...+.++..+..++.+|.++........+.+
T Consensus 136 l-t~~y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~~~~~~~~~~ 210 (402)
T PF02487_consen 136 L-THFYGK----SSLSAWSSGTGGAGLVGALYYLGLTTLGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPTNRPYQESESE 210 (402)
T ss_pred H-HHhcCc----cccccccCCcChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcccCCC
Confidence 6 446653 357888888888888888776666544 457788888887777766666666654332211111110
Q ss_pred ccCCccccCCCcccccccchhhhhhhhhhHHHHhc-CCCcHHHHHHHHHHHHHHHHHHH-HHHHHHhhcccCCCCCChhh
Q 009816 270 ESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWK-IPGVAPFALCLFFAKLVAYTFLY-WLPFYVSHTAVDGKYLSSEM 347 (524)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~ 347 (524)
... +++....+.+..+.+ ...+..+++-++ -+.....++-.++.++..+.++. ..|...-.. ...-...+
T Consensus 211 ~~~--~~~~~~~~~~~~~~~---~~~~~~~~~k~~~~k~Ll~ymiPL~lVY~aEY~InqGv~~tl~fp~---~~~~~r~~ 282 (402)
T PF02487_consen 211 DEA--EDDLLESETSESKPD---SSSKLSFKEKLKRLKPLLWYMIPLFLVYFAEYFINQGVAPTLLFPN---SFFSPRDQ 282 (402)
T ss_pred Ccc--ccccccccccccccc---ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHhcCCc---cCCCHHHH
Confidence 000 000000000000000 001111111111 11222233334444455544432 233332211 01222344
Q ss_pred hhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHH
Q 009816 348 AGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAV 427 (524)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 427 (524)
..+....+.+|..+++--..++ |+.+.+.+.+...+..+..++-......++.|...+..+..|+..|..+......+
T Consensus 283 Y~~Y~~~YQ~GVFISRSS~~~~--rir~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~~I 360 (402)
T PF02487_consen 283 YRWYQLLYQLGVFISRSSLPFF--RIRRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTFYRI 360 (402)
T ss_pred HHHHHHHHHHHHhhhhcceeee--ehhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 5556666777766665443222 33332332222222222222222222234567777778888999899998888888
Q ss_pred HhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhh
Q 009816 428 SADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYI 469 (524)
Q Consensus 428 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l 469 (524)
.++.++ +.|-.++|.......+|..++..++-++
T Consensus 361 ~~~~~~--------~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 361 SEEVPP--------EDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HhcCCH--------HHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 877653 5667788888777777777666654433
No 191
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=99.16 E-value=1.9e-09 Score=101.89 Aligned_cols=347 Identities=12% Similarity=0.048 Sum_probs=175.0
Q ss_pred hhHhHHHHHHHHHHHhhhhhhhccccc----CCchhhH-HHHHHHHHHHHHHHhcccc------cc------chhHHHHH
Q 009816 110 ALLGELDLAFLSIYAGGMFFSGHLGDR----LDLRIFL-TVGMVGTGLFTSLYGIGYW------GN------VHSFYYYL 172 (524)
Q Consensus 110 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr----~Grr~~l-~~~~~~~~~~~~~~~~a~~------~~------~~~~~~~~ 172 (524)
.-.+.+--..-+...+.+++.|..+|| |||||.+ ..+.+..+++.++..++.. +. ......++
T Consensus 67 k~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~ 146 (498)
T KOG0637|consen 67 KWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFI 146 (498)
T ss_pred ccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHH
Confidence 444555555666677889999999995 7988764 4455666777777776511 00 01233444
Q ss_pred HHHHHHHHhhhcchhhHHHHHhhccccccccc-eehhhhhhhhhHHHHHHHHHHHhhhcCch--hHHHHhHHHHHHHHHH
Q 009816 173 VVQMLAGLFQSTGWPSVVAVVGNWFGKSKRGL-IMGIWNAHTSIGNITGSLVASALLTYGWG--WSFVVPGLIIAFVGLI 249 (524)
Q Consensus 173 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~-~~~~~~~~~~~G~~ig~~l~~~l~~~gwr--~~f~~~~~~~~~~~~~ 249 (524)
+.-.+.-++.-....++.+++.|...++++.+ +++.+....++|.++|..++.+. +|+ .+|.....+-+.+..+
T Consensus 147 lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~---~~~~~~~Ft~~~~~~~~C~~~ 223 (498)
T KOG0637|consen 147 LGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYL---GLYKIFPFTLTTACDLYCANL 223 (498)
T ss_pred HHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccccc---CceEEeehHHHHHHHHHHHHH
Confidence 44445555666778888999999997766666 99999999999999999888754 333 2233322222222222
Q ss_pred HHHhcC-------CCCCCCCCCCccccccCC-ccccCCCcccccccchhhhhhhhhhHHHHhc-CCCcHHHHHHHHHHHH
Q 009816 250 VFLFLP-------VNPESVGTDTNEEDESLS-PKKIGEGVTQPLLRRETKIEEKAVGFIEAWK-IPGVAPFALCLFFAKL 320 (524)
Q Consensus 250 ~~~~~~-------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 320 (524)
-..+.. ++-.. ....++++.... .+.+.+..+.+... .. +-.+.+ .+..+.+++...+.+.
T Consensus 224 ~~~~~~~v~L~~i~~~~~-l~~~~~~~~s~~~~~~~~~~~~~~~~~-------e~--fG~~~~mpr~m~~L~i~~lltW~ 293 (498)
T KOG0637|consen 224 KLCFFLEVTLLLIETSES-LWYPQEKPLSPKGTTARSKSSKLPFLL-------EI--FGALKVMPRPMRMLLIVTLLTWI 293 (498)
T ss_pred HHHHHHhhhhhheecccc-cccccccCCCCCcccccccccCcchHH-------HH--hchHhhCChhHHHHHHHHHHHHH
Confidence 111111 11000 000000000000 00000000000000 00 111222 2456777888888888
Q ss_pred HHHHHHHHHHHHHhhccc--CCCCCCh-----------hhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHH
Q 009816 321 VAYTFLYWLPFYVSHTAV--DGKYLSS-----------EMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCA 387 (524)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~--~~~g~~~-----------~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~ 387 (524)
+.+.+..+...++.+... ++.+-+. ..-.+=+.++.+...+.+.+..++.+|+|-|+.+..+.....
T Consensus 294 a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~ 373 (498)
T KOG0637|consen 294 AWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFG 373 (498)
T ss_pred HHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHH
Confidence 888877777777655432 1111110 111233455666667778888999999995554433333222
Q ss_pred HHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhh--c---------c---cc-cCCCCccchhHHHHHHH
Q 009816 388 IPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADL--G---------T---HS-SLKGNSRALATVTAIID 452 (524)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~---------~---~~-~~~~~~~~~g~~~g~~~ 452 (524)
++..+... ..+.+....-....|+..+......+......- + + .+ +.....+..|...|+.+
T Consensus 374 ~~~~~~gl---~~~~~~~~~~~~~~G~~~~~~~~~p~~l~~~y~~~g~~~a~t~~~pf~~~s~~~~~sg~g~G~~~gvln 450 (498)
T KOG0637|consen 374 LATGLAGL---VLNTYVVLSHRSTAGILSSPLLTVPYGALALYAILGIPLAITFSIPFALASIEIGNSGLGQGLDLGVLN 450 (498)
T ss_pred HHHHHHhh---hhhHHHHHHHHhhcceeecchhcccHHHHHHHHHhCCccccccccccccccccccCccCCCCceeeeee
Confidence 22211111 112222222222333222222221111111100 0 0 00 00111233467777888
Q ss_pred hhhhhhhhhhhhhhHhhccc
Q 009816 453 GTGSVGAAIGPLLTGYISAT 472 (524)
Q Consensus 453 ~~~~~g~~i~~~~~g~l~~~ 472 (524)
..-.+..++.....|.+.+.
T Consensus 451 ~~I~ipQvivs~~~Gp~~~~ 470 (498)
T KOG0637|consen 451 CAIVIPQVLVSLGLGPLDQL 470 (498)
T ss_pred eeeeehhheeeccccchhhh
Confidence 77788888888777877776
No 192
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.15 E-value=2.1e-09 Score=105.72 Aligned_cols=175 Identities=15% Similarity=0.118 Sum_probs=118.4
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHH
Q 009816 307 GVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYC 386 (524)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~ 386 (524)
.++...+..+......+......+.+-+.. +|++..+.+++.++..++..+.++..|++.||+|.|+.+.++.++.
T Consensus 35 ~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~----~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~ 110 (462)
T PRK15034 35 NLWISVSCLLLAFCVWMLFSAVTVNLNKIG----FNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAIL 110 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhh----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHH
Confidence 344333333333333333333344444433 7999999999999999999999999999999999999998888887
Q ss_pred HHHHHHHHHhh--cchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhh
Q 009816 387 AIPALFFYRSY--GHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPL 464 (524)
Q Consensus 387 ~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~ 464 (524)
.+..+...... ..++.+..++.-++.|++ +..++.....+.+.+| ++.+|++.|+....+++|..+++.
T Consensus 111 ~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp--------~~~rG~A~Gi~~g~G~~G~~l~~~ 181 (462)
T PRK15034 111 IIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFP--------KAKQGSALGINGGLGNLGVSVMQL 181 (462)
T ss_pred HHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCC--------HhHhHHHHHHHHHHHhhHHHHHHH
Confidence 77666554321 124667777788888886 6677888888888887 366899999997667777766555
Q ss_pred hhHhhc-----c-------------c-ChhHHHHHHHHHHHHHHHHHHH
Q 009816 465 LTGYIS-----A-------------T-SWTAVFTMLMAAALISGLLLTR 494 (524)
Q Consensus 465 ~~g~l~-----~-------------~-~~~~~~~~~~~~~~~~~~~~~~ 494 (524)
+...+. + . +++.+.++...+.++..++.++
T Consensus 182 l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~ 230 (462)
T PRK15034 182 VAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWS 230 (462)
T ss_pred HHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 544322 1 1 3566666666655555444443
No 193
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.14 E-value=1e-09 Score=98.54 Aligned_cols=184 Identities=17% Similarity=0.135 Sum_probs=138.2
Q ss_pred hhhHHHHHHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhhHhHH
Q 009816 36 QAIVLIVTFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTALLGEL 115 (524)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~ 115 (524)
||..+....... ......+.++...|.+++. +|++. +|...+
T Consensus 1 rW~~l~a~~~v~-~~~Gt~Y~Fs~yS~~Lk~~------------------------------l~~sq-------~~l~~l 42 (250)
T PF06813_consen 1 RWLSLVASIWVQ-LCSGTTYTFSAYSPQLKSR------------------------------LGYSQ-------SQLNTL 42 (250)
T ss_pred ChhhHHHHHHHH-HhcCcccchhhhhHHHHHH------------------------------hCCCH-------HHHHHH
Confidence 466554444433 3444677788888888877 78777 999999
Q ss_pred HHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccc--hhHHHHHHHHHHHHHhhhcchhhHHHHH
Q 009816 116 DLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNV--HSFYYYLVVQMLAGLFQSTGWPSVVAVV 193 (524)
Q Consensus 116 ~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~--~~~~~~~~~r~l~G~~~~~~~~~~~~~i 193 (524)
.++..+|..+ +++.|.+.|++|++.++.+|.+...+|..+...+..... .++|.+.+..++.|.+.+....++....
T Consensus 43 ~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~ 121 (250)
T PF06813_consen 43 STAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTC 121 (250)
T ss_pred HHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHH
Confidence 9999999886 589999999999999999999999999988877543322 4788888888999888877777777777
Q ss_pred hhccccccccceehhhhhhhhhHHHHHHHHHHHhhhcCchhHHHHhHHHHHHHHHHHHHhcCCCCC
Q 009816 194 GNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALLTYGWGWSFVVPGLIIAFVGLIVFLFLPVNPE 259 (524)
Q Consensus 194 ~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~ 259 (524)
.+.|| ++||.+.|+.-...+++..+-..+...+.+-+-...+++.+....+..++..++++..|+
T Consensus 122 ~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~fll~la~~~~~v~l~~~~~vr~~~~ 186 (250)
T PF06813_consen 122 VRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSFLLFLAVLPAVVCLVAMFFVRPVPP 186 (250)
T ss_pred HHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhheeccCC
Confidence 78897 589999999999999998887766666653343344455565555555555556655443
No 194
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.14 E-value=6.4e-09 Score=100.63 Aligned_cols=153 Identities=8% Similarity=0.057 Sum_probs=121.0
Q ss_pred HHHHHHHhhcccCCCCCChhh-hhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHH
Q 009816 327 YWLPFYVSHTAVDGKYLSSEM-AGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALN 405 (524)
Q Consensus 327 ~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (524)
.+...++.+. +|++..+ .|.+...+..+..+..+++|+++||+|.|+.+..+.+...+..++..+ ..+...+
T Consensus 46 s~a~p~L~~e----lglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~f---a~Sl~~L 118 (511)
T TIGR00806 46 SFITPYLLTV----LNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLL---GTSVWHM 118 (511)
T ss_pred HHHHHHHHHH----cCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHH---HHHHHHH
Confidence 3334455544 7999999 999999999999999999999999999999999888888777766654 3467777
Q ss_pred HHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhcccChhH---HHHHHH
Q 009816 406 IALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISATSWTA---VFTMLM 482 (524)
Q Consensus 406 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~---~~~~~~ 482 (524)
.+.-++.|++-+..+ ....++...+| ++.|+++.|+.+....+|.++++++.+++...+|+. ..++..
T Consensus 119 ~i~R~llGvaEA~~~-A~~syI~~WfP--------~kER~ratsi~~sg~~vG~~Ia~~L~qll~s~gWr~y~~Ln~Isl 189 (511)
T TIGR00806 119 QLMEVFYSVTMAARI-AYSSYIFSLVP--------PSRYQRAAAYSRAAVLLGVFLSSVLGQLLVTLGWISYSTLNIISL 189 (511)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHCC--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHH
Confidence 888899999999988 88888888888 477899999999999999999999999965545554 333444
Q ss_pred HHHHHHHHHHHHH
Q 009816 483 AAALISGLLLTRL 495 (524)
Q Consensus 483 ~~~~~~~~~~~~~ 495 (524)
+...++.++.+++
T Consensus 190 ~s~~~a~~~a~~L 202 (511)
T TIGR00806 190 VFMTFSVFLALFL 202 (511)
T ss_pred HHHHHHHHHHHhC
Confidence 4444444444443
No 195
>PRK10133 L-fucose transporter; Provisional
Probab=99.13 E-value=2.8e-09 Score=106.49 Aligned_cols=148 Identities=18% Similarity=0.157 Sum_probs=114.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHH
Q 009816 309 APFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAI 388 (524)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~ 388 (524)
..+.+..+...+.........|.+. +. +|.++.+.++..+.+.++..++.++.|++.||+|||+.+..+..+..+
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~p~i~-~~----~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~ 103 (438)
T PRK10133 29 ALLCSLFFLWAVANNLNDILLPQFQ-QA----FTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYAL 103 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HH----hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 3444555555666666777788874 44 799999999999999999999999999999999999999999888888
Q ss_pred HHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHh
Q 009816 389 PALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGY 468 (524)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~ 468 (524)
+.++.......++.+..++..++.|++.+.........+.+. ++ ++.++...++.+....+|..++|.+.+.
T Consensus 104 ~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~-~~-------~~~~~~~~s~~~~~~~~G~~~g~~~g~~ 175 (438)
T PRK10133 104 GAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVL-GP-------ESSGHFRLNLAQTFNSFGAIIAVVFGQS 175 (438)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHh-CC-------hhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 776543222245677777888889999888888888877654 33 2334456888888889999999988765
Q ss_pred h
Q 009816 469 I 469 (524)
Q Consensus 469 l 469 (524)
+
T Consensus 176 l 176 (438)
T PRK10133 176 L 176 (438)
T ss_pred H
Confidence 4
No 196
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.13 E-value=1.1e-09 Score=102.96 Aligned_cols=167 Identities=19% Similarity=0.224 Sum_probs=128.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHH
Q 009816 316 FFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYR 395 (524)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~ 395 (524)
+..++..+....-+-..+.+. +|+|+.|.+++.++..+.+.+.++..|.+.||+|.|++...+.++..+..+.+..
T Consensus 23 f~v~F~VW~l~s~l~~~i~~~----~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~ 98 (417)
T COG2223 23 FDVGFMVWTLFSPLGVFIKSD----FGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAF 98 (417)
T ss_pred HHHHHHHHHHHHHHHhhhccc----cCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHH
Confidence 333344444444444444454 8999999999999999999999999999999999999999999998888887776
Q ss_pred hhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-C-
Q 009816 396 SYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-S- 473 (524)
Q Consensus 396 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~- 473 (524)
.....+.+..+++-++.|++ ++.+......++..+|+ +..|.+.|+.. .+++|..+...+..++... +
T Consensus 99 a~~~~~~~~ll~~gll~G~~-GasFav~m~~~s~~fP~--------~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~ 168 (417)
T COG2223 99 AVTYPSTWQLLVIGLLLGLA-GASFAVGMPNASFFFPK--------EKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGF 168 (417)
T ss_pred HccCCchHHHHHHHHHHhcc-cceehcccccccccCCh--------hhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhh
Confidence 55555556667777777765 55566777788888874 67799999999 8999999988888888776 6
Q ss_pred --hhHHHHHHHHHHHHHHHHHHHHH
Q 009816 474 --WTAVFTMLMAAALISGLLLTRLV 496 (524)
Q Consensus 474 --~~~~~~~~~~~~~~~~~~~~~~~ 496 (524)
|+.+..+.....++..+..++..
T Consensus 169 ~~w~~~~~i~~~~l~v~~v~~~~~~ 193 (417)
T COG2223 169 LAWRNVAGIYVVALAIAAVLAWLGM 193 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 77777777776666655555443
No 197
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=99.13 E-value=9.3e-08 Score=93.16 Aligned_cols=334 Identities=13% Similarity=0.064 Sum_probs=187.5
Q ss_pred HHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhcc----ccccc------hhHHHHHHHHHHHHHhhhcc-h
Q 009816 118 AFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIG----YWGNV------HSFYYYLVVQMLAGLFQSTG-W 186 (524)
Q Consensus 118 ~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a----~~~~~------~~~~~~~~~r~l~G~~~~~~-~ 186 (524)
.-.+...+.++..|.+.||..|.++...+++.--++..+++.. ..... .....+++.-.+.|.-.-.. .
T Consensus 46 ~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~ 125 (432)
T PF06963_consen 46 VRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASI 125 (432)
T ss_pred HHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHh
Confidence 4445667788899999999999998877766643333322221 00000 11222222222333221111 2
Q ss_pred hhHHHHHhhcc------ccccccceehhhhhhhhhHHHHHHHHHHHhhh-cCchhHHHHhHHHHHHHHHHHHHhcC----
Q 009816 187 PSVVAVVGNWF------GKSKRGLIMGIWNAHTSIGNITGSLVASALLT-YGWGWSFVVPGLIIAFVGLIVFLFLP---- 255 (524)
Q Consensus 187 ~~~~~~i~~~~------~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~-~gwr~~f~~~~~~~~~~~~~~~~~~~---- 255 (524)
....++=.||. +++.+.+.++.+.-.-.+.-+++|++.|.+.. .+.+....+.++..++...+-++++.
T Consensus 126 ~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~ 205 (432)
T PF06963_consen 126 ANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLLARVYN 205 (432)
T ss_pred hhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222335553 34456677777777778889999999999985 78888877777777776555444432
Q ss_pred CCCCCCCCCCccccccCCccc-cCCCccc-cccc-chhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Q 009816 256 VNPESVGTDTNEEDESLSPKK-IGEGVTQ-PLLR-RETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFY 332 (524)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (524)
..|+-..+++..+++.....+ ..+.... ...+ ..+..++...+|+..+++|.+... ++..+.++...++...+..|
T Consensus 206 ~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~vflas-~alalLY~TVLsf~~lmt~y 284 (432)
T PF06963_consen 206 SVPALAVKKRSSESESSSDEESSSESSSDPSILKRLWNPLRTIIRGWRTYFRQPVFLAS-FALALLYFTVLSFGGLMTAY 284 (432)
T ss_pred hChHhcCCCCCccccccccccccccccchhhHHHHHHHHHHHHhccHHHHHhCHHHHHH-HHHHHHHHHHhcCcHHHHHH
Confidence 222211111111111110000 0000000 0000 011112233456667777755443 44444444455566778888
Q ss_pred HhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHH---HHHhhcch----hHHHH
Q 009816 333 VSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALF---FYRSYGHL----SLALN 405 (524)
Q Consensus 333 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~---~~~~~~~~----~~~~~ 405 (524)
+... |+++...|..-....+.++.+.++..++.+|+|..|.-.++...-..+..+ ..+....+ +...+
T Consensus 285 l~~~-----G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l 359 (432)
T PF06963_consen 285 LKSQ-----GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLL 359 (432)
T ss_pred HHHC-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHH
Confidence 8885 999999999999999999999999999999999988766655433322221 12211211 22333
Q ss_pred HHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhh
Q 009816 406 IALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLL 465 (524)
Q Consensus 406 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~ 465 (524)
+....+.-++.-+.-......+++.+| ++.||+..|+-+..+++...+.-.+
T Consensus 360 ~~gi~~SR~GLW~fDL~~~qi~Qe~V~--------~~~Rg~v~gvq~sl~~lf~ll~~~~ 411 (432)
T PF06963_consen 360 LGGIALSRIGLWSFDLAVTQIMQENVP--------ESERGAVSGVQNSLQSLFELLSFVL 411 (432)
T ss_pred HHHHHHHHHHHHhhhHHHHHhhcccCC--------HHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 333444444444444455566666666 3678999999998888877665444
No 198
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.12 E-value=1.1e-10 Score=110.45 Aligned_cols=175 Identities=17% Similarity=0.153 Sum_probs=139.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHH
Q 009816 311 FALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPA 390 (524)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 390 (524)
..+...+.+..++.=-+.+|-.+.+. .+-+|.++...|++...+.+...+.+++.|++.||++|++++.++..+-.++.
T Consensus 34 ~l~il~~vnlmny~Dr~~iagv~~~v-~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av 112 (493)
T KOG1330|consen 34 TLVILCLVNLMNYADRYTIAGVLKEV-QTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAV 112 (493)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhHHH-HHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHH
Confidence 33334444444444334444333322 11279999999999999999999999999999999999999999988887777
Q ss_pred HHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhc
Q 009816 391 LFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYIS 470 (524)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~ 470 (524)
+...+. ...|.+.++-.+.|++-+...+..++.+++.++. ..|+++.++.+....+|..+|-...+.+.
T Consensus 113 ~~~~fs---~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~--------~~Rs~~~~ify~~ipvGsglG~vvgs~va 181 (493)
T KOG1330|consen 113 FASGFS---NHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPD--------DKRSRVLGIFYFAIPVGSGLGYVVGSVVA 181 (493)
T ss_pred HHHHHH---HHHHHHHHHHHHhccchhhhcccchhHhhhcCcc--------hhhhHHHHHhhhhcccccceeEEeeeeec
Confidence 666542 6678888888899999999999999999999884 67899999999999999999999988888
Q ss_pred cc--ChhHHHHHHHHHHHHHHHHHHHHHH
Q 009816 471 AT--SWTAVFTMLMAAALISGLLLTRLVV 497 (524)
Q Consensus 471 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (524)
+. .|++.|...+++.++..++..++.+
T Consensus 182 ~~~~~Wr~af~~~avl~vi~~~L~~~f~~ 210 (493)
T KOG1330|consen 182 SLTFWWRWAFRGSAVLGVIVGLLVFLFVR 210 (493)
T ss_pred cCccceEEEEEeehHHHHHHHHHHHhhcc
Confidence 77 5999999999998887777765544
No 199
>PRK09952 shikimate transporter; Provisional
Probab=99.10 E-value=8.6e-10 Score=110.50 Aligned_cols=145 Identities=17% Similarity=0.123 Sum_probs=102.1
Q ss_pred hhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhH
Q 009816 110 ALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSV 189 (524)
Q Consensus 110 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~ 189 (524)
.+...+.....+...++.+++|+++||+|||++++.+.++..++.+...... ...++.+.+++..++.|++.+...+..
T Consensus 286 ~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~ 364 (438)
T PRK09952 286 ELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMAL-EAQSIFWIVFFSIMLANIAHDMVVCVQ 364 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHH-HcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444455556666778889999999999999998888766555443332210 001344455556677788888888888
Q ss_pred HHHHhhccccccccceehhhhh-hhhhHHHHHHHHHHHhhh-c--CchhHHHHhHHHHHHHHHHHHHhcCC
Q 009816 190 VAVVGNWFGKSKRGLIMGIWNA-HTSIGNITGSLVASALLT-Y--GWGWSFVVPGLIIAFVGLIVFLFLPV 256 (524)
Q Consensus 190 ~~~i~~~~~~~~r~~~~~~~~~-~~~~G~~ig~~l~~~l~~-~--gwr~~f~~~~~~~~~~~~~~~~~~~~ 256 (524)
.++++|.+|.+.|+.+.++... +..+|..++|.+.+++.+ . +|+..+...+++.++..+. .+.++|
T Consensus 365 ~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~-~~~~~~ 434 (438)
T PRK09952 365 QPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMT-ALLMKD 434 (438)
T ss_pred HHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHH-HHHccc
Confidence 9999999999999888888544 455889999999998864 2 4888888777666655444 344554
No 200
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.09 E-value=1.7e-09 Score=103.94 Aligned_cols=188 Identities=15% Similarity=0.125 Sum_probs=150.8
Q ss_pred HhcCCC-cHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhh-hhhHHH
Q 009816 302 AWKIPG-VAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRL-DARAIT 379 (524)
Q Consensus 302 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~~ 379 (524)
.+++|+ ++.+...-+.-.+.+|++...+..|+.....+++|++..++.-++..+..-.-+..+++||++||+ |+|+++
T Consensus 16 ~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI 95 (498)
T COG3104 16 FFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTI 95 (498)
T ss_pred cCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHH
Confidence 344444 455666667788999999999999999885444669999998888888877778899999999996 999999
Q ss_pred HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhh
Q 009816 380 AASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGA 459 (524)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 459 (524)
..+.++.+++.+++.... ........+.+.+++++.+..-+...+.+.+.+++.+. | |-...++..+.-++|+
T Consensus 96 ~lGail~~iGh~~L~~~~-~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~Dp-----r-rD~gFt~fY~~iNiGs 168 (498)
T COG3104 96 VLGAILMAIGHLVLAISS-VSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDP-----R-RDGGFTLFYMGINIGS 168 (498)
T ss_pred HHHHHHHHHHHHHHhccc-cccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCc-----c-cCCCccEEEEEeehHH
Confidence 999999999988876531 12345567777778899999989999999999886542 3 5566788888889999
Q ss_pred hhhhhhhHhhccc-ChhHHHHHHHHHHHHHHHHHHHHH
Q 009816 460 AIGPLLTGYISAT-SWTAVFTMLMAAALISGLLLTRLV 496 (524)
Q Consensus 460 ~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 496 (524)
.++|.+.+++.+. +|...|...++.+.++.+.....+
T Consensus 169 l~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~ 206 (498)
T COG3104 169 LIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGR 206 (498)
T ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcc
Confidence 9999999999998 999999999888887776665443
No 201
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.08 E-value=1.3e-09 Score=107.26 Aligned_cols=134 Identities=15% Similarity=0.067 Sum_probs=112.1
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQML 177 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l 177 (524)
.|+++ .+.|.+.+...++..+..++.|++.||+|+|+.+..+.++.+++.++.+.+ ++.+.+++..++
T Consensus 235 ~g~s~-------~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l 302 (382)
T PRK11128 235 AGYSA-------STIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGST-----TALPWLIVIQIL 302 (382)
T ss_pred CCCCH-------hHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhh-----hhHHHHHHHHHH
Confidence 56665 788999999999999999999999999999999999999988888877775 889999999999
Q ss_pred HHHhhhcchhhHHHHHhhccccccccceehhhh-hhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHH
Q 009816 178 AGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIWN-AHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAF 245 (524)
Q Consensus 178 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~ 245 (524)
.|++.+...+....++.+. +++++++..+... ....+|..+||.++|.+. .+|+ ..|+..+++.++
T Consensus 303 ~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~ 370 (382)
T PRK11128 303 HCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALP 370 (382)
T ss_pred HHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHH
Confidence 9999998889999988886 5666788888876 556788899999999998 4576 466666655543
No 202
>TIGR00898 2A0119 cation transport protein.
Probab=99.08 E-value=1.8e-09 Score=110.60 Aligned_cols=137 Identities=17% Similarity=0.189 Sum_probs=108.3
Q ss_pred HHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHHHHhhc
Q 009816 117 LAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVAVVGNW 196 (524)
Q Consensus 117 s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~ 196 (524)
....+....+.++.+++.||+|||+.+.++.++.+++.++..+.. ..+.+...+.-++.+++.+..++....+..|.
T Consensus 362 ~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 438 (505)
T TIGR00898 362 FISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVP---VDLYFLRTALAVLGKFGITSAFQMVYLYTAEL 438 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcC---CCchHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 445566778888999999999999999999998888887777641 11224455556667777777788889999999
Q ss_pred cccccccceehhhhhhhhhHHHHHHHHHHHhhhcCchhHHHHhHHHHHHHHHHHHHhcCCCC
Q 009816 197 FGKSKRGLIMGIWNAHTSIGNITGSLVASALLTYGWGWSFVVPGLIIAFVGLIVFLFLPVNP 258 (524)
Q Consensus 197 ~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~ 258 (524)
+|.+.|+.++|+......+|.+++|.+.+ +...++..++++.+++.++.+++ .+++||+.
T Consensus 439 ~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~lpet~ 498 (505)
T TIGR00898 439 YPTVVRNLGVGVCSTMARVGSIISPFLVY-LGEKWLFLPLVLFGGLALLAGIL-TLFLPETK 498 (505)
T ss_pred ccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHHHHHhhHHHHHHHHHHHHHHH-HHcCcCCC
Confidence 99999999999999999999999999998 66667788888888777776554 45677654
No 203
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.08 E-value=7.5e-09 Score=102.66 Aligned_cols=163 Identities=13% Similarity=0.037 Sum_probs=120.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhh-----hhhH-HHHHHHHHH
Q 009816 313 LCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRL-----DARA-ITAASFMYC 386 (524)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----~~~~-~~~~~~~~~ 386 (524)
..++............+|.|+++. |+|.++.|++...... .+..++.|+++||+ |||| .+..+....
T Consensus 6 ~l~~~~~~~~~~~~~~~~~~l~~~-----g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~ 78 (402)
T PRK11902 6 LLGFASGLPLALTSGTLQAWMTVE-----GLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGL 78 (402)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHc-----CCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHH
Confidence 334455566667778899999995 9999999998666554 57889999999999 7776 566666666
Q ss_pred HHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhh
Q 009816 387 AIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLT 466 (524)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~ 466 (524)
+++...+....+..+.+......++.+++.....+...+.+.+..+ +++|+++.++......+|..+++.+.
T Consensus 79 ~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~--------~~~r~~~~~~~~~g~~~g~i~g~~l~ 150 (402)
T PRK11902 79 AASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLH--------PEERGAGAAVKVLGYRLAMLVSGGLA 150 (402)
T ss_pred HHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--------hhhhhHHHHHHHHHHHHHHHHHhHHH
Confidence 5555554443233345555555556676666677777788888776 36679999999988899999999999
Q ss_pred Hhhccc--ChhHHHHHHHHHHHHHHH
Q 009816 467 GYISAT--SWTAVFTMLMAAALISGL 490 (524)
Q Consensus 467 g~l~~~--~~~~~~~~~~~~~~~~~~ 490 (524)
+++.+. +|+..|++.+++.++..+
T Consensus 151 ~~l~~~~~gw~~~f~i~a~~~l~~~l 176 (402)
T PRK11902 151 LWLADRVLGWGNTYLLMAGLMLAGAL 176 (402)
T ss_pred HHHHhcccCHHHHHHHHHHHHHHHHH
Confidence 988884 899999988877655443
No 204
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.07 E-value=1.2e-08 Score=103.41 Aligned_cols=177 Identities=12% Similarity=0.021 Sum_probs=130.8
Q ss_pred HHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhh-----hh
Q 009816 301 EAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRL-----DA 375 (524)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----~~ 375 (524)
+..++++...+....+............+|.++++. |.+..+.+.... .+... ++.++.|.++||+ ||
T Consensus 7 ~~~~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~~-----g~~~~~ig~~~~-~~~~~-~~~~l~gpl~Dr~~~~~~Gr 79 (491)
T PRK11010 7 RIFQQPNSAILLILGFASGLPLALTSGTLQAWMTVE-----NIDLKTIGFFSL-VGQAY-VFKFLWSPLMDRYTPPFLGR 79 (491)
T ss_pred HHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCCHHHHHHHHH-HHHHH-HHHHHHHHHHHcccccCCCC
Confidence 344556666666666777777778888899999885 999999988632 23332 5789999999999 88
Q ss_pred hHH-HHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhh
Q 009816 376 RAI-TAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGT 454 (524)
Q Consensus 376 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 454 (524)
|+. +..+.+..+++...+....+..+.+...+..++.+++.+...+....+..+.+++ +.|+++.++....
T Consensus 80 rr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~--------~~rg~~~~i~~~g 151 (491)
T PRK11010 80 RRGWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPA--------EERGAGAAISVLG 151 (491)
T ss_pred chHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCh--------hhhHHHHHHHHHH
Confidence 886 4455555545544444433345566666677777888777777777888887763 6679999999999
Q ss_pred hhhhhhhhhhhhHhhcc-c-ChhHHHHHHHHHHHHHHHHH
Q 009816 455 GSVGAAIGPLLTGYISA-T-SWTAVFTMLMAAALISGLLL 492 (524)
Q Consensus 455 ~~~g~~i~~~~~g~l~~-~-~~~~~~~~~~~~~~~~~~~~ 492 (524)
..+|..+++.+.+++.+ . ||+..|++.+++.++..+..
T Consensus 152 ~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~ 191 (491)
T PRK11010 152 YRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIAT 191 (491)
T ss_pred HHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988 4 99999999887766554433
No 205
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.06 E-value=1e-09 Score=111.23 Aligned_cols=144 Identities=11% Similarity=0.122 Sum_probs=117.8
Q ss_pred CCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhh
Q 009816 341 KYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPY 420 (524)
Q Consensus 341 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 420 (524)
++++..+.|.+.+.+.++.++++++.|++.||+|+|+.+..+.++..+..++.... ...+.+..++.-++.|++.+..+
T Consensus 71 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~-~~~~~~~l~~~r~~~G~~~~~~~ 149 (465)
T TIGR00894 71 FKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWA-AGGGIALVVFCRVIQGLAQGSVS 149 (465)
T ss_pred CCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHH-HHcCchHHHHHHHHHHHhcccch
Confidence 68999999999999999999999999999999999999888877766665544321 12234556667788899989988
Q ss_pred HHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc--ChhHHHHHHHHHHHHHHHHHH
Q 009816 421 ALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT--SWTAVFTMLMAAALISGLLLT 493 (524)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~--~~~~~~~~~~~~~~~~~~~~~ 493 (524)
+....++.+..| ++.|+++.|+.+....+|..++|.+.+++.+. +|+..|++.++..++..++..
T Consensus 150 ~~~~~~~~~~~~--------~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~ 216 (465)
T TIGR00894 150 PATHKIIVKWAP--------PKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWF 216 (465)
T ss_pred hhHHHHHHhcCC--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHH
Confidence 888888888887 36789999999999999999999999998876 899999988877665544443
No 206
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.05 E-value=1.4e-09 Score=100.93 Aligned_cols=148 Identities=16% Similarity=0.132 Sum_probs=129.4
Q ss_pred CCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhh
Q 009816 341 KYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPY 420 (524)
Q Consensus 341 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 420 (524)
++-+..+.|++++...+.+++.+++.|.+.||+|+|..+.+++.++....+++.+ ..+.+..++.=.+-|++.+...
T Consensus 101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFaf---g~sy~~l~vAR~LQgvgsA~~~ 177 (464)
T KOG3764|consen 101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAF---GNSYPMLFVARSLQGVGSAFAD 177 (464)
T ss_pred ccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHH---cchhHHHHHHHHHhhhhHHHHH
Confidence 5667889999999999999999999999999999999999999988888777765 3566667777788999999999
Q ss_pred HHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-ChhHHHHHHHHHHHHHHHHHHHHHHH
Q 009816 421 ALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-SWTAVFTMLMAAALISGLLLTRLVVA 498 (524)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (524)
......+++.++++ +.|++++|+.-.+..+|..+||+++|.+++. |++..|.++++++++-..+.++...+
T Consensus 178 tsglamlAd~f~~d-------~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p 249 (464)
T KOG3764|consen 178 TSGLAMLADVFPED-------NERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEP 249 (464)
T ss_pred hhhHHHHHHHcccc-------hhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCc
Confidence 89999999999864 5679999999999999999999999999999 99999999999998887776655433
No 207
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.05 E-value=2.7e-09 Score=88.48 Aligned_cols=131 Identities=17% Similarity=0.289 Sum_probs=102.6
Q ss_pred HHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhh
Q 009816 352 STLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADL 431 (524)
Q Consensus 352 ~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 431 (524)
.+...++.+++.++.|++.||++||+.+..+.....+..+.... ..+.+...+..++.|++.+...+.......+..
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 80 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFAL---SSNITVLIIARFLQGFGAAFALVAGAALIADIY 80 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHH---hccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHC
Confidence 44567788899999999999999999988777776666555433 245566666777888888887878878888877
Q ss_pred cccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-ChhHHHHHHHHHHHHHHHHHH
Q 009816 432 GTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-SWTAVFTMLMAAALISGLLLT 493 (524)
Q Consensus 432 ~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~ 493 (524)
++ +.++++.++.+....++..++|.+.+++.+. +|+..+.+.+...+++.+...
T Consensus 81 ~~--------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (141)
T TIGR00880 81 PP--------EERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLA 135 (141)
T ss_pred Ch--------hhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHh
Confidence 63 6679999999999999999999999999887 888888887766665554443
No 208
>PTZ00207 hypothetical protein; Provisional
Probab=99.03 E-value=1.3e-08 Score=103.11 Aligned_cols=159 Identities=18% Similarity=0.063 Sum_probs=112.5
Q ss_pred HHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhc---c
Q 009816 323 YTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYG---H 399 (524)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 399 (524)
+.+..+.|.. ++. +|++..+.+.+...... .....++.|++.||+|+|+++.++.++..++.++...... .
T Consensus 44 y~fsv~s~~L-~~~----lgls~~~l~~i~svg~~-~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~ 117 (591)
T PTZ00207 44 YAFNLISGAM-QAR----YNLTQRDLSTITTVGIA-VGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIE 117 (591)
T ss_pred HHHHHHHHHH-HHH----hCcCHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 3444555554 444 79999999988766333 3345667899999999999999999988888776655311 1
Q ss_pred hhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhcccChhHHHH
Q 009816 400 LSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISATSWTAVFT 479 (524)
Q Consensus 400 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~ 479 (524)
.+.+.+.+..++.|++.+..++.....+.+.+| +.||++.|+......+|+++.+.+...+...+++..|+
T Consensus 118 ~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp---------~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~~~~~~fl 188 (591)
T PTZ00207 118 GSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP---------SNRGAVVAIMKTFTGLGSAILGSIQLAFFSDNTSAYFF 188 (591)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh---------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 356666677777888877777777777777665 55799999999999999986554444444346777788
Q ss_pred HHHHHHHHHHHHHHHHH
Q 009816 480 MLMAAALISGLLLTRLV 496 (524)
Q Consensus 480 ~~~~~~~~~~~~~~~~~ 496 (524)
+.+++.++..++...+.
T Consensus 189 ~l~vl~~vv~ll~~~~v 205 (591)
T PTZ00207 189 FLMSFALVVGILAIVFM 205 (591)
T ss_pred HHHHHHHHHHHHHHhhe
Confidence 87777766655555443
No 209
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.02 E-value=7e-09 Score=116.90 Aligned_cols=171 Identities=16% Similarity=0.188 Sum_probs=118.3
Q ss_pred HHhcCCCcHHHHHHHHHHHHHHHHHHHHHH---HH-HhhcccCCCCC-ChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhh
Q 009816 301 EAWKIPGVAPFALCLFFAKLVAYTFLYWLP---FY-VSHTAVDGKYL-SSEMAGNLSTLFDVGGVLGGILAGHISDRLDA 375 (524)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~ 375 (524)
.++++++++.+.+..++..+........++ .| +... .+. +....++..+++.+..++.+++.|+++||++|
T Consensus 6 ~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~----~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~r 81 (1140)
T PRK06814 6 YLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGA----LGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDK 81 (1140)
T ss_pred hhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccc----cccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccH
Confidence 467778888777777766665433322222 11 2221 122 22456777788889999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhh
Q 009816 376 RAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTG 455 (524)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 455 (524)
|+++........+............+.+.++++.++.|++.+...+...+.+.+.+++ +.++.++|+.++..
T Consensus 82 k~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~--------~~~~~a~~~~~~~~ 153 (1140)
T PRK06814 82 AKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNK--------DELLGANALVEAGT 153 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCc--------cccchhhHHHHHHH
Confidence 9976432222211111111111125677788888899999888889999999988874 66799999999999
Q ss_pred hhhhhhhhhhhHhhccc-ChhHHHHHHHH
Q 009816 456 SVGAAIGPLLTGYISAT-SWTAVFTMLMA 483 (524)
Q Consensus 456 ~~g~~i~~~~~g~l~~~-~~~~~~~~~~~ 483 (524)
.+|.++||.++|++.+. +|+..|...++
T Consensus 154 ~ig~~igp~l~g~l~~~~~~~~~~~~~~~ 182 (1140)
T PRK06814 154 FIAILLGTIIGGLATISGNFVILVALLMG 182 (1140)
T ss_pred HHHHHHHHHHHHHHHhccccHHHHHHHHH
Confidence 99999999999999887 88877733333
No 210
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.00 E-value=2.2e-08 Score=102.27 Aligned_cols=120 Identities=17% Similarity=0.208 Sum_probs=96.5
Q ss_pred CCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcch---hHHHHHHHHHHHHhhhhh
Q 009816 342 YLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHL---SLALNIALMFITGMFVNG 418 (524)
Q Consensus 342 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~ 418 (524)
..+..+.+++.+...++.+++.++.|+++||+|||+.+..+.++..++.++........ +....++.-++.|++.+.
T Consensus 52 ~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~ 131 (502)
T TIGR00887 52 PLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGG 131 (502)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhh
Confidence 34566778889999999999999999999999999999888777777665544321111 245667778889999999
Q ss_pred hhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhh
Q 009816 419 PYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYI 469 (524)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l 469 (524)
.++....++.+..|+ +.|+++.++.+....+|..+++.+...+
T Consensus 132 ~~~~~~~~~~e~~p~--------~~Rg~~~~~~~~~~~~g~~~g~~~~~~~ 174 (502)
T TIGR00887 132 DYPLSAIITSEFATK--------KWRGAMMAAVFAMQGFGILAGAIVALIV 174 (502)
T ss_pred hhHHHHHHHHHhcCh--------hhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999884 7789999999999999998888876654
No 211
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.99 E-value=7.5e-06 Score=80.97 Aligned_cols=259 Identities=10% Similarity=0.038 Sum_probs=156.8
Q ss_pred hhHhHHHHHHHHHHHhh-hhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccch----------------------
Q 009816 110 ALLGELDLAFLSIYAGG-MFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVH---------------------- 166 (524)
Q Consensus 110 ~~~g~~~s~~~l~~~~~-~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~---------------------- 166 (524)
..+.++-+...+...+. .++.+++++|++|++++-+....+....+++++...+..+
T Consensus 43 e~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~ 122 (472)
T TIGR00769 43 EIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGF 122 (472)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHH
Confidence 67889988888887777 8999999999999999888777777666666654211111
Q ss_pred ----hHHHHHHHHHHHHHhhhcchh-hHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhhhc---------Cc
Q 009816 167 ----SFYYYLVVQMLAGLFQSTGWP-SVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALLTY---------GW 232 (524)
Q Consensus 167 ----~~~~~~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~---------gw 232 (524)
+.|...+.-+...+-.....+ .-..+++|.++.+|-.|..++...+.++|.++++.+..++.+. .|
T Consensus 123 i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~ 202 (472)
T TIGR00769 123 IAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGW 202 (472)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChH
Confidence 123333444445554444554 7788999999999999999999999999999999888777621 24
Q ss_pred h----hHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCc
Q 009816 233 G----WSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGV 308 (524)
Q Consensus 233 r----~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (524)
. ..+.+.++.+.+. +.+...+.+.....+.....+ + . .++++++.....+++.++++|.+
T Consensus 203 ~~~~~~l~~i~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~-~--~------------~~k~k~k~~~~es~k~i~~S~yL 266 (472)
T TIGR00769 203 HVSLKNLMVIVICSGLAI-ILLYWWVNRNVLTDPRSYNPA-L--K------------EKKVKPKMSTMESLKFLVSSPYI 266 (472)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHhcccCCccccchh-h--c------------cccCCCCCCHHHHHHHHHhCHHH
Confidence 2 2333333333333 334444432221111000000 0 0 00011111235667888999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhh---hhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHH
Q 009816 309 APFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEM---AGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMY 385 (524)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~ 385 (524)
+.+.+...+.+..........-..+.+. +--+.+. .|.+....++..++..++.+++.+|+|-+....+.-++
T Consensus 267 ~~ia~~vi~y~~~~nlve~~~k~~v~~~----~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii 342 (472)
T TIGR00769 267 LDLALLVIAYGISINLVEVTWKSKLKAQ----YPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITPLV 342 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 7777776666655555544444444544 2212122 23344455666666677779999999988776655554
Q ss_pred HHH
Q 009816 386 CAI 388 (524)
Q Consensus 386 ~~~ 388 (524)
..+
T Consensus 343 ~li 345 (472)
T TIGR00769 343 MLL 345 (472)
T ss_pred HHH
Confidence 444
No 212
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.99 E-value=1.1e-08 Score=115.83 Aligned_cols=159 Identities=14% Similarity=0.133 Sum_probs=116.7
Q ss_pred HhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCC--ChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHH
Q 009816 302 AWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYL--SSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAIT 379 (524)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~ 379 (524)
.++++.++.+.+..++..+........+..++... ++. +....+++.+++.++.++++++.|+++||+|||+.+
T Consensus 5 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l 80 (1146)
T PRK08633 5 LLKIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKA----YDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVI 80 (1146)
T ss_pred hhhhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHH----cCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHH
Confidence 45667777777777766655544444444444333 333 334467888888999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhh
Q 009816 380 AASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGA 459 (524)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 459 (524)
..+.++..+..++........+.+..++..++.|++.+...+....++.+.+++ +.++.++|+......+|.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~--------~~r~~~~~~~~~~~~ig~ 152 (1146)
T PRK08633 81 RIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGK--------ENLSRANGLLEAFTIVAI 152 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCc--------ccchhhhhHHHHHHHHHH
Confidence 877765544444333222234566777777888988888888888888888874 667999999999999999
Q ss_pred hhhhhhhHhhccc
Q 009816 460 AIGPLLTGYISAT 472 (524)
Q Consensus 460 ~i~~~~~g~l~~~ 472 (524)
++|+.+++++.+.
T Consensus 153 ~lg~~l~~~l~~~ 165 (1146)
T PRK08633 153 LAGTALFSFLFES 165 (1146)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988754
No 213
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.97 E-value=4.3e-09 Score=105.78 Aligned_cols=119 Identities=17% Similarity=0.186 Sum_probs=100.8
Q ss_pred hhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhH
Q 009816 110 ALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSV 189 (524)
Q Consensus 110 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~ 189 (524)
.+.+++.+...++..++.+++++++||+|+|+++.++.++.+++.++..+. .++.+.+++..++.|++.+...+..
T Consensus 257 ~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~ 332 (437)
T TIGR00792 257 ELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFA----GSNLPLILVLIILAGFGQNFVTGLV 332 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc----chhHHHHHHHHHHHHHHHHHHHHHH
Confidence 567778888899999999999999999999999999998888887777664 2466777788889999999889999
Q ss_pred HHHHhhccc-------cccccceehhhhhhhhhHHHHHHHHHHHhhh-cCc
Q 009816 190 VAVVGNWFG-------KSKRGLIMGIWNAHTSIGNITGSLVASALLT-YGW 232 (524)
Q Consensus 190 ~~~i~~~~~-------~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~-~gw 232 (524)
.++++|..+ ++++|...|+.+....+|..+++.+.+.+.+ .||
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 333 WALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred HHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999998865 4557889999999999999999999988873 455
No 214
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.97 E-value=2.5e-08 Score=100.44 Aligned_cols=156 Identities=17% Similarity=0.132 Sum_probs=112.1
Q ss_pred HHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHH
Q 009816 327 YWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNI 406 (524)
Q Consensus 327 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (524)
..++...++. |-+ ....++.....++..++.++.|+++|.+|||..++.+.++..++.++... .++....+
T Consensus 65 ~~l~~I~~di-----G~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~at---A~~~~~~i 135 (599)
T PF06609_consen 65 SILPYINADI-----GGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCAT---AQNMNTFI 135 (599)
T ss_pred HHHHHHHHhc-----CCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhc---CCcHHHHH
Confidence 4455555553 654 55667778888999999999999999999999999999888888877653 45666777
Q ss_pred HHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-ChhHHHHHHHHHH
Q 009816 407 ALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-SWTAVFTMLMAAA 485 (524)
Q Consensus 407 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~~~~~~~~~ 485 (524)
....+.|++.+... .....++|.+|. |.|....++.....-.....+|.+...+... +|++.|++.++..
T Consensus 136 ag~~l~GvgaG~~~-~~~~~isEl~p~--------k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~ 206 (599)
T PF06609_consen 136 AGMVLYGVGAGVQE-LAALAISELVPN--------KWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWS 206 (599)
T ss_pred HHHHHHHHhhHHHH-HHHHHHHHhccc--------chhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHH
Confidence 88888888755544 445557777763 5566666666555445555677777666554 9999999998887
Q ss_pred HHHHHHHHHHHHHHh
Q 009816 486 LISGLLLTRLVVAEV 500 (524)
Q Consensus 486 ~~~~~~~~~~~~~~~ 500 (524)
.++++...+++++.+
T Consensus 207 ~i~~vl~~~fY~PP~ 221 (599)
T PF06609_consen 207 GIALVLIFFFYFPPP 221 (599)
T ss_pred HHHHHHHHHHhCCCc
Confidence 777766655554433
No 215
>PRK15075 citrate-proton symporter; Provisional
Probab=98.95 E-value=1e-08 Score=102.83 Aligned_cols=122 Identities=16% Similarity=-0.014 Sum_probs=86.2
Q ss_pred hhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHH-HHhccccccchhHHHHHHHHHHHHHhhhcchhh
Q 009816 110 ALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTS-LYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPS 188 (524)
Q Consensus 110 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~-~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~ 188 (524)
.+.++....+.++..++.+++|+++||+|||++++.+.++..+... ..... ...+++..+.+..++.|++.+...+.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~ 351 (434)
T PRK15075 274 ADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWL--VAAPSFARMLAVELWLSFLYGSYNGA 351 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH--HcCCchHHHHHHHHHHHHHHHHHHhh
Confidence 6778888888999999999999999999999988776544332221 11110 00134444445556666776666677
Q ss_pred HHHHHhhccccccccceehhhhh-hhhhHHHHHHHHHHHhh-hcCch
Q 009816 189 VVAVVGNWFGKSKRGLIMGIWNA-HTSIGNITGSLVASALL-TYGWG 233 (524)
Q Consensus 189 ~~~~i~~~~~~~~r~~~~~~~~~-~~~~G~~ig~~l~~~l~-~~gwr 233 (524)
...++.|.+|+++|+.++++... +..++..++|.+.+.+. ..|++
T Consensus 352 ~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 352 MVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred HHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 77889999999999999998644 34445777898888887 45654
No 216
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.95 E-value=1.1e-08 Score=102.02 Aligned_cols=151 Identities=16% Similarity=0.230 Sum_probs=123.0
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhcccccCCch--hhHHHHHHHHHHHHHHHhccc---cccchhHHHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGDRLDLR--IFLTVGMVGTGLFTSLYGIGY---WGNVHSFYYYL 172 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr--~~l~~~~~~~~~~~~~~~~a~---~~~~~~~~~~~ 172 (524)
+|++. .++..+.-+..+...+|++++|++.||+|.| ++++++++++.+..+...+.. ....++-+.++
T Consensus 312 lg~s~-------~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~ 384 (477)
T PF11700_consen 312 LGMST-------TQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFW 384 (477)
T ss_pred cCcCH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHH
Confidence 88887 8888888889999999999999999999999 888888877754444433300 00127888899
Q ss_pred HHHHHHHHhhhcchhhHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhhh-c-CchhHHHHhHHHHHHHHHHH
Q 009816 173 VVQMLAGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALLT-Y-GWGWSFVVPGLIIAFVGLIV 250 (524)
Q Consensus 173 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~-~-gwr~~f~~~~~~~~~~~~~~ 250 (524)
+.-++.|+..|..++...++.++..|+++.+..+|++....-....+||++-+.+.+ . +-|+.+....++.++. ++.
T Consensus 385 ~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~g-l~l 463 (477)
T PF11700_consen 385 VLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIG-LIL 463 (477)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHH-HHH
Confidence 999999999999999999999999999999999999999999999999999999884 3 4888888877665555 444
Q ss_pred HHhcCC
Q 009816 251 FLFLPV 256 (524)
Q Consensus 251 ~~~~~~ 256 (524)
+..++.
T Consensus 464 l~~v~~ 469 (477)
T PF11700_consen 464 LFFVDV 469 (477)
T ss_pred Hhhccc
Confidence 454543
No 217
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.95 E-value=7e-09 Score=99.68 Aligned_cols=146 Identities=20% Similarity=0.190 Sum_probs=127.1
Q ss_pred hhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhH
Q 009816 110 ALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSV 189 (524)
Q Consensus 110 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~ 189 (524)
...|.+.+...+.-.+...+..++.+|+|.|+.++++..+.++=.++++++ ++.+.+.+.+.+.|+-.+....+.
T Consensus 259 ~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~-----~~~~~i~~~klLH~~e~~l~lva~ 333 (412)
T PF01306_consen 259 QMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFA-----TNPWVISLIKLLHALEFPLLLVAA 333 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT-------SHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhh-----cchHHHHHHHHHHHHHHHHHHHHH
Confidence 668999999999999999999999999999999999999999999999997 999999999999999999999999
Q ss_pred HHHHhhccccccccceehh-hhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHHhcCCCCCC
Q 009816 190 VAVVGNWFGKSKRGLIMGI-WNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFLFLPVNPES 260 (524)
Q Consensus 190 ~~~i~~~~~~~~r~~~~~~-~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~ 260 (524)
..++++.+|+|..+....+ .+...++|..+.+.++|.+. +.|.+.+|++++.+.++..++..+.+++++++
T Consensus 334 fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~~ 406 (412)
T PF01306_consen 334 FKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKKQ 406 (412)
T ss_dssp HHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSST
T ss_pred HHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCcc
Confidence 9999999998877777776 47888899999999999988 67999999999999988888888888765443
No 218
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.94 E-value=9e-09 Score=101.72 Aligned_cols=142 Identities=15% Similarity=0.168 Sum_probs=105.4
Q ss_pred CCCCCCCCCCchhhHhHHHHHHH-HHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhc-cccccchhHHHHHHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFL-SIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGI-GYWGNVHSFYYYLVVQ 175 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~-l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~-a~~~~~~~~~~~~~~r 175 (524)
.|+++ ++.|++..... ....++.++.|++.||+|+|+.+..+.++.++..+.... ......++...+....
T Consensus 238 ~G~s~-------~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (390)
T TIGR02718 238 AGWPL-------EWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCS 310 (390)
T ss_pred cCCCH-------HHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHH
Confidence 67776 88999888776 466677899999999999999988877665333322221 1000013344445555
Q ss_pred HHHHHhhhcchhhHHHHHhhcccc-ccccceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHH
Q 009816 176 MLAGLFQSTGWPSVVAVVGNWFGK-SKRGLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFV 246 (524)
Q Consensus 176 ~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~ 246 (524)
.+.+++.+...+...+.+.+..++ +++++.+++.+...++|..+||.++|.+. ..||+..|++.+++.++.
T Consensus 311 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a 383 (390)
T TIGR02718 311 AFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLA 383 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHH
Confidence 666777777778888887777766 78999999999999999999999999998 469999998877665554
No 219
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.93 E-value=2.4e-08 Score=97.35 Aligned_cols=153 Identities=16% Similarity=0.103 Sum_probs=107.7
Q ss_pred HHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhh-----hhhHHH-HHHHHHHHHHHHHHHHhh
Q 009816 324 TFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRL-----DARAIT-AASFMYCAIPALFFYRSY 397 (524)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----~~~~~~-~~~~~~~~~~~~~~~~~~ 397 (524)
.....+|.++++ .|+|..+.++.... .+...+ .++.|+++||+ ||||.+ ..+....++....+.+..
T Consensus 6 ~~~~~~~~~~~~-----~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~ 78 (356)
T TIGR00901 6 LVGNTLPYWLRS-----KNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLV 78 (356)
T ss_pred hHHhHHHHHHHH-----cCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCC
Confidence 344567888887 59999999998655 444444 88999999998 788875 444444444444443332
Q ss_pred cchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-C---
Q 009816 398 GHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-S--- 473 (524)
Q Consensus 398 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~--- 473 (524)
+..+.+......++.+++.+...+...+.+.+..+ ++.|+.+.|+......+|..+++.+.+.+.+. +
T Consensus 79 ~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~--------~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~ 150 (356)
T TIGR00901 79 PSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILS--------DEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANT 150 (356)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--------HhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhccccc
Confidence 22344444555555666666666777777777776 36679999999999999999999999888776 6
Q ss_pred -----hhHHHHHHHHHHHHHHHH
Q 009816 474 -----WTAVFTMLMAAALISGLL 491 (524)
Q Consensus 474 -----~~~~~~~~~~~~~~~~~~ 491 (524)
|+..|++.++..++..++
T Consensus 151 ~~~~~wr~~f~i~ai~~l~~~~~ 173 (356)
T TIGR00901 151 GLITLWGYIFFWTALLILPGLLV 173 (356)
T ss_pred ccccccHHHHHHHHHHHHHHHHH
Confidence 999998887766654433
No 220
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.93 E-value=2.7e-08 Score=98.70 Aligned_cols=173 Identities=15% Similarity=0.031 Sum_probs=118.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHh----hhhhhHHHHHHHHHH
Q 009816 311 FALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISD----RLDARAITAASFMYC 386 (524)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~~~~~~~~~~~~~~ 386 (524)
+....+...+.+.....+++.|+++ +|.++...+.+..+..+.+++..++.|+++| |+|||+..+......
T Consensus 9 ~~~~~~Giq~~~~l~~~~l~~yl~~-----lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~ 83 (477)
T TIGR01301 9 VASVAAGVQFGWALQLSLLTPYVQE-----LGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAAL 83 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHH
Confidence 3334444455666667788888877 5999999999999999999999999999999 599999987754444
Q ss_pred HHHH-HHHHHhhcc----------hh-H---HHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHH
Q 009816 387 AIPA-LFFYRSYGH----------LS-L---ALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAII 451 (524)
Q Consensus 387 ~~~~-~~~~~~~~~----------~~-~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 451 (524)
.+.. .++...... .+ . +..++.+.+..++.+...++..+.+.+..|++ .+.++.+.++.
T Consensus 84 ~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~------~~~~~~a~~~~ 157 (477)
T TIGR01301 84 VAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGD------ARRTRIANAYF 157 (477)
T ss_pred HHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCch------hHHHHHHHHHH
Confidence 3333 333221100 00 0 22233344455677777777888888887753 23446789999
Q ss_pred HhhhhhhhhhhhhhhHhhc--c--------------cChhHHHHHHHHHHHHHHHHHHH
Q 009816 452 DGTGSVGAAIGPLLTGYIS--A--------------TSWTAVFTMLMAAALISGLLLTR 494 (524)
Q Consensus 452 ~~~~~~g~~i~~~~~g~l~--~--------------~~~~~~~~~~~~~~~~~~~~~~~ 494 (524)
+....+|+.+++.+.+... + .+++..|++.+++.+++.++...
T Consensus 158 ~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~ 216 (477)
T TIGR01301 158 SFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALS 216 (477)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHee
Confidence 9999999999998887641 1 05677888877777766665554
No 221
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.93 E-value=1.2e-08 Score=96.91 Aligned_cols=129 Identities=16% Similarity=0.200 Sum_probs=102.3
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQML 177 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l 177 (524)
+|+++ .+.++..+.+..++.++.+..+++.||+|+|+++.++.++..++.++.... ++... ...-++
T Consensus 173 ~g~s~-------~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~-----~~~~~-~~~~~l 239 (310)
T TIGR01272 173 LGLPE-------DQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALT-----HGYVA-MWFVLA 239 (310)
T ss_pred CCCCH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHc-----CCHHH-HHHHHH
Confidence 56666 889999999999999999999999999999999988888877777666553 33322 234557
Q ss_pred HHHhhhcchhhHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHH
Q 009816 178 AGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGL 241 (524)
Q Consensus 178 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~ 241 (524)
.|++.+..+|...+...+.+|+ +.+.+.++. ....+|..++|++.|.+. ..|.+..|++..+
T Consensus 240 ~g~~~s~i~P~~~s~a~~~~~~-~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~ 302 (310)
T TIGR01272 240 LGLFNSIMFPTIFSLALNALGR-HTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVP 302 (310)
T ss_pred HHHHHHHHHHHHHHHHHhhhhh-hhhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHH
Confidence 8999999999999999998875 455666665 566789999999888887 4788888876443
No 222
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.93 E-value=3e-08 Score=96.69 Aligned_cols=144 Identities=20% Similarity=0.136 Sum_probs=107.5
Q ss_pred HHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHH
Q 009816 325 FLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLAL 404 (524)
Q Consensus 325 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (524)
....+|.+.++ +|.+..+.+++.+...++..++.++.|++.||+++|+.+..+.....++.+.. . .++.+.
T Consensus 19 ~~~~lp~l~~~-----~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~---~~~~~~ 89 (355)
T TIGR00896 19 VGPLLPQIRSA-----LGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-S---APGTAL 89 (355)
T ss_pred CcccHHHHHHH-----hCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-H---hccHHH
Confidence 34567777776 69999999999999999999999999999999999999888776665554433 2 234455
Q ss_pred HHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc---ChhHHHHHH
Q 009816 405 NIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT---SWTAVFTML 481 (524)
Q Consensus 405 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~---~~~~~~~~~ 481 (524)
.++..++.|++.+...+.......+..+ +.++++.++.+....+|..+++.+.+.+.+. +|+..|...
T Consensus 90 l~~~~~~~g~g~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~ 160 (355)
T TIGR00896 90 LFAGTALIGVGIAIINVLLPSLIKRDFP---------QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWW 160 (355)
T ss_pred HHHHHHHHHHHHHHHhccchHHHHHhCc---------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHH
Confidence 5556666777766655555555544433 4578999999999999999999998888765 377777766
Q ss_pred HHHHH
Q 009816 482 MAAAL 486 (524)
Q Consensus 482 ~~~~~ 486 (524)
++..+
T Consensus 161 ~~~~~ 165 (355)
T TIGR00896 161 ALPAL 165 (355)
T ss_pred HHHHH
Confidence 55443
No 223
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.92 E-value=6.2e-08 Score=97.08 Aligned_cols=130 Identities=18% Similarity=0.132 Sum_probs=93.3
Q ss_pred hHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcc-----hhHHHHHHHHHHHHhhhhhhhHHHH
Q 009816 350 NLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGH-----LSLALNIALMFITGMFVNGPYALIT 424 (524)
Q Consensus 350 ~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~ 424 (524)
...+...++..+++++.|+++||+|||+.+..+..+..++.+...+.... ......++.-++.|++.++.++...
T Consensus 67 ~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~ 146 (432)
T PRK10406 67 GVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSA 146 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHH
Confidence 34445556666999999999999999999999888887777665542211 1123455666788999999999999
Q ss_pred HHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhc---------ccChhHHHHHHHHHHHH
Q 009816 425 TAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYIS---------ATSWTAVFTMLMAAALI 487 (524)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~---------~~~~~~~~~~~~~~~~~ 487 (524)
+++.|..|+ +.|+...++.......|..+++.+...+. +.+|+..|++.++..++
T Consensus 147 ~~i~e~~p~--------~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll 210 (432)
T PRK10406 147 TYMSEVAVE--------GRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVV 210 (432)
T ss_pred HHHHHhCCC--------CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHH
Confidence 999988874 55688888777666677777666544332 33899999876655443
No 224
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.91 E-value=6.6e-08 Score=90.50 Aligned_cols=144 Identities=17% Similarity=0.105 Sum_probs=115.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHH
Q 009816 316 FFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYR 395 (524)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~ 395 (524)
|+.+......+-.+...+++. ++.+..+++++...+..+..+.++..+++.+|+|.|+-++.+..++++++.+++-
T Consensus 22 Ffl~G~~~~l~diLip~l~~~----f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~p 97 (422)
T COG0738 22 FFLWGFITCLNDILIPHLKEV----FDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWP 97 (422)
T ss_pred HHHHHHHhhcchhhHHHHHHH----hCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhh
Confidence 333333444444555556666 7999999999999999999999999999999999999999999999999888764
Q ss_pred hhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhcc
Q 009816 396 SYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISA 471 (524)
Q Consensus 396 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~ 471 (524)
.....++..+++.+++.+.+.+........++...-++ +..+.-+.+.+.++.+|++++|.+.+++..
T Consensus 98 Aa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~--------~~a~~rlnl~q~fn~lGa~~gp~~g~~lil 165 (422)
T COG0738 98 AASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKP--------ESAAFRLNLAQAFNGLGAILGPLLGSSLIL 165 (422)
T ss_pred hhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCc--------hhHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 44445677777888888888888877777777776653 344667788899999999999999998877
No 225
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.89 E-value=1.1e-07 Score=86.54 Aligned_cols=350 Identities=14% Similarity=0.081 Sum_probs=207.4
Q ss_pred HHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHHHHhhcccc
Q 009816 120 LSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVAVVGNWFGK 199 (524)
Q Consensus 120 ~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 199 (524)
.-.+.+.-.+.=.+.|..-.|+++++-.+.......+..+. ++.+.+=+.-+..|...+. ..+-++++-+..++
T Consensus 52 TYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g-----~sV~~mQvlE~FyG~~tAa-EIAYysYIYs~Vd~ 125 (433)
T KOG3810|consen 52 TYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFG-----PSVKAMQVLEFFYGPATAA-EIAYYSYIYSKVDP 125 (433)
T ss_pred hHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhc-----CCchheeeehhhcChHHHH-HHhhhheeeeecCH
Confidence 33445555666678899888998887766666666777775 8899998999999988654 57778899999999
Q ss_pred ccccceehhhhhhhhhHHHHHHHHHHHhhhcCchhHHHH--hHHHHHHHHHHHHHhcCCCCCCCCCCCccccccCCcccc
Q 009816 200 SKRGLIMGIWNAHTSIGNITGSLVASALLTYGWGWSFVV--PGLIIAFVGLIVFLFLPVNPESVGTDTNEEDESLSPKKI 277 (524)
Q Consensus 200 ~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~gwr~~f~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (524)
+++.++.+...+..-.|...|..++-.+...+|-.-+.. ..+....++.....++|..++..-..+.+++....+.++
T Consensus 126 ~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~rSl~f~~~~~~~~v~~~e~ 205 (433)
T KOG3810|consen 126 EMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVKRSLYFHRLEDKISVGDLEE 205 (433)
T ss_pred HHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCchhhhhhcccccceeccchh
Confidence 999999999999999999999988888875433222221 122333344555566775543221111111111000000
Q ss_pred CCCccccccc-chhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHH
Q 009816 278 GEGVTQPLLR-RETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFD 356 (524)
Q Consensus 278 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 356 (524)
..+ ..+..+ .+.........+....+||++....+...+..++++...++.-..-.+.. -+-....-|..-++..
T Consensus 206 ~~~-~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~---~~~~~vyNG~veAv~t 281 (433)
T KOG3810|consen 206 MNP-QASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVA---PNPANVYNGAVEAVST 281 (433)
T ss_pred cCc-cchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhC---CCchhhhcCHHHHHHH
Confidence 000 000000 00111122345566778999988888888888787777766655555541 0111222344455666
Q ss_pred HHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhccccc
Q 009816 357 VGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSS 436 (524)
Q Consensus 357 ~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 436 (524)
+.++++.+..|.+--++.|..-+.++.....-+.+++.. ...++.|+..+...++...+....+.....++....
T Consensus 282 lLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m-~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~---- 356 (433)
T KOG3810|consen 282 LLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIM-AQTQHIWVCYAGYVLFRVIYQLTITIATFQIARNLS---- 356 (433)
T ss_pred HHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhh-hcccceehhhhhHHHHHhhHhhhhhHHHHHHHHhhh----
Confidence 777788888888877666654333332222222223222 234567777788888877777776676677777665
Q ss_pred CCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc------------ChhHHHHHHHHHHHHHHHH
Q 009816 437 LKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT------------SWTAVFTMLMAAALISGLL 491 (524)
Q Consensus 437 ~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~------------~~~~~~~~~~~~~~~~~~~ 491 (524)
.+..|...|++.++.-+-..+-..+ +.|. -|..-|.+.+++.+++...
T Consensus 357 ----~e~~gLvFGiNTFvAl~lQsilT~i---Vvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~ 416 (433)
T KOG3810|consen 357 ----SELFGLVFGINTFVALILQSILTLI---VVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGI 416 (433)
T ss_pred ----hhhheeeeehHHHHHHHHHHhheEE---EEcccccCCCcceeEEEEeehHHHHHHHHHHHHHH
Confidence 3556778887766554443333322 2332 1344566666666655444
No 226
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.88 E-value=7.7e-09 Score=107.52 Aligned_cols=144 Identities=15% Similarity=0.211 Sum_probs=114.1
Q ss_pred CCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhc----------------------
Q 009816 341 KYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYG---------------------- 398 (524)
Q Consensus 341 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------- 398 (524)
++++..+.|++.+.+.++..++.++.+++.||.+||+.+.++.++.+++.++..+...
T Consensus 63 F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~ 142 (633)
T TIGR00805 63 FKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANS 142 (633)
T ss_pred hCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCcccccccccccccccccc
Confidence 7999999999999999999999999999999999999998888888887776643210
Q ss_pred --------------------------chhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHH
Q 009816 399 --------------------------HLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIID 452 (524)
Q Consensus 399 --------------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 452 (524)
......+++.-++.|++.+..++....++.+.+++ +.++...|+.+
T Consensus 143 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~--------~~~~~~~~i~~ 214 (633)
T TIGR00805 143 FLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKS--------KNSPLYIGILE 214 (633)
T ss_pred ccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCc--------cccHHHHHHHH
Confidence 00133455677889999999888888888888874 66799999999
Q ss_pred hhhhhhhhhhhhhhHhhccc--C---------------------hhHHHHHHHHHHHHHHHHH
Q 009816 453 GTGSVGAAIGPLLTGYISAT--S---------------------WTAVFTMLMAAALISGLLL 492 (524)
Q Consensus 453 ~~~~~g~~i~~~~~g~l~~~--~---------------------~~~~~~~~~~~~~~~~~~~ 492 (524)
....+|..+|+.+++++.+. + |+..|++.+++.++.++..
T Consensus 215 ~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l 277 (633)
T TIGR00805 215 SIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPF 277 (633)
T ss_pred HHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999887642 1 4556777666666554443
No 227
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.87 E-value=1.6e-08 Score=100.17 Aligned_cols=149 Identities=21% Similarity=0.254 Sum_probs=128.1
Q ss_pred CCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhh
Q 009816 340 GKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGP 419 (524)
Q Consensus 340 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 419 (524)
.+++++.+-+++.+....|.+++.+.+|++.||+|.|+++..+.++.++..++..... ..+.+..+++-++.|++.+..
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa-~~~~~~~~~~R~lqGl~~g~~ 145 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAA-SIGFYLLLVLRFLQGLGQGVL 145 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHH-HhcchhhHHHHHHhHHHHhHH
Confidence 3788999999999999999999999999999999999999999888888777765532 233345677788899999999
Q ss_pred hHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc--ChhHHHHHHHHHHHHHHHHHHHHHH
Q 009816 420 YALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT--SWTAVFTMLMAAALISGLLLTRLVV 497 (524)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (524)
++.......+-.|+ +.|++..++.....++|.+++-++.|++-+. ||+..|++.+++.++..++.+++..
T Consensus 146 ~pa~~~i~~~W~P~--------~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~ 217 (466)
T KOG2532|consen 146 FPAIGSILAKWAPP--------NERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYS 217 (466)
T ss_pred HhhhhceeeeECCH--------HHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999888884 6679999999999999999999999999988 9999999999998877776665544
No 228
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.86 E-value=2.2e-08 Score=94.24 Aligned_cols=146 Identities=15% Similarity=0.195 Sum_probs=123.9
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQML 177 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l 177 (524)
+||+. .++.++.-...+...++++++|++.||+|.|+++..++++..+..+..-+. ..-..+.++-.+
T Consensus 283 ~gls~-------~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~-----~~~~~f~i~gll 350 (438)
T COG2270 283 LGLSS-------TELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFL-----EGELDFWILGLL 350 (438)
T ss_pred cCccH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHc-----cccHHHHHHHHH
Confidence 88887 999999999999999999999999999999999999999988888777774 666777888899
Q ss_pred HHHhhhcchhhHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhhh--cCchhHHHHhHHHHHHHHHHHHHhcC
Q 009816 178 AGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALLT--YGWGWSFVVPGLIIAFVGLIVFLFLP 255 (524)
Q Consensus 178 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~--~gwr~~f~~~~~~~~~~~~~~~~~~~ 255 (524)
.|...|..+..+.++..+..|++|-++.+|++....-.+..+||.+-+.+.+ .+-|..+....++..+. ++.+..+|
T Consensus 351 ~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iG-l~~L~~v~ 429 (438)
T COG2270 351 VGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIG-LLLLLRVK 429 (438)
T ss_pred HHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhh-HhhEEeec
Confidence 9999999999999999999999999999999999999999999999998884 35677666655444333 44444454
Q ss_pred C
Q 009816 256 V 256 (524)
Q Consensus 256 ~ 256 (524)
+
T Consensus 430 ~ 430 (438)
T COG2270 430 V 430 (438)
T ss_pred C
Confidence 4
No 229
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.85 E-value=4.3e-08 Score=90.61 Aligned_cols=119 Identities=21% Similarity=0.346 Sum_probs=94.7
Q ss_pred CCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhh
Q 009816 341 KYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPY 420 (524)
Q Consensus 341 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 420 (524)
.+.+...+|++-+.+++...+.++..|.++||+|||.++..+....++..++... +.+...++..=++.|++ .+..
T Consensus 63 ~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~---S~~F~afv~aR~l~Gi~-kgnl 138 (451)
T KOG2615|consen 63 DGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWAL---SRNFAAFVLARFLGGIF-KGNL 138 (451)
T ss_pred ccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHhhhhc-cCch
Confidence 4456778899999999999999999999999999999999888887775555543 34553333334556655 4556
Q ss_pred HHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhcc
Q 009816 421 ALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISA 471 (524)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~ 471 (524)
+...+++++..++ +.++.+++.++....+|.++||.++|++..
T Consensus 139 ~v~rAiisdV~se--------k~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 139 SVIRAIISDVVSE--------KYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHHHHHHHhhcCh--------hhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 6778888888774 667899999999999999999999999987
No 230
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.85 E-value=2.2e-08 Score=88.54 Aligned_cols=144 Identities=15% Similarity=0.096 Sum_probs=105.8
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHH-HHHHHhccccccchhHHHHHHHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGL-FTSLYGIGYWGNVHSFYYYLVVQM 176 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~~~r~ 176 (524)
+|+++ ...+.+.+.-..-.++.+++.|.++||+|++...+.+..+..+ +-....+ +++.=++...
T Consensus 295 fGlS~-------~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~F-------t~lsPy~~m~ 360 (459)
T KOG4686|consen 295 FGLSA-------VSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFF-------TFLSPYTSMT 360 (459)
T ss_pred hCCCh-------hhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHh-------hhccHHHHHH
Confidence 88887 7788888888888889999999999999999887776555444 3333333 2333345667
Q ss_pred HHHHhhhcchhhHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhhh----cCchhHHHHhHHHHHHHHHHHHH
Q 009816 177 LAGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALLT----YGWGWSFVVPGLIIAFVGLIVFL 252 (524)
Q Consensus 177 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~----~gwr~~f~~~~~~~~~~~~~~~~ 252 (524)
+.|+............++...|+++.|.+.|..+...++|..+.|++++.+.+ +.|--.|++......+..+...+
T Consensus 361 ~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~ 440 (459)
T KOG4686|consen 361 FLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILF 440 (459)
T ss_pred HHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHh
Confidence 77887776666667778888999999999999999999999999999999983 34655665544444444344444
Q ss_pred hcC
Q 009816 253 FLP 255 (524)
Q Consensus 253 ~~~ 255 (524)
.+.
T Consensus 441 ~~N 443 (459)
T KOG4686|consen 441 YLN 443 (459)
T ss_pred hee
Confidence 443
No 231
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.83 E-value=6e-08 Score=95.23 Aligned_cols=155 Identities=16% Similarity=0.152 Sum_probs=114.9
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchh--HH--HHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHS--FY--YYLV 173 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~--~~--~~~~ 173 (524)
-|++. .+.-+......+...+..+++..+.||+|||+.++.+..++.+..+++..+....... +. ..++
T Consensus 300 aG~~~-------~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~ 372 (485)
T KOG0569|consen 300 AGFTP-------EEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIA 372 (485)
T ss_pred cCCCH-------HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 56666 7778888888999999999999999999999999999999988888777642111011 11 1233
Q ss_pred HHHHHHHhhhc-chhhHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHH
Q 009816 174 VQMLAGLFQST-GWPSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVF 251 (524)
Q Consensus 174 ~r~l~G~~~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~ 251 (524)
+.++..++.+. .-|...-+.+|.+|++.|+.++++.....-+...+-...-..+. .+|- +.|++..+.+++..+..+
T Consensus 373 ~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~ 451 (485)
T KOG0569|consen 373 AIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLY 451 (485)
T ss_pred HHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHH
Confidence 44444443332 25788889999999999999999988888877776655555554 3454 777888888888889999
Q ss_pred HhcCCCCCC
Q 009816 252 LFLPVNPES 260 (524)
Q Consensus 252 ~~~~~~~~~ 260 (524)
+.+||++.+
T Consensus 452 ~~lPETkgr 460 (485)
T KOG0569|consen 452 RYLPETKGR 460 (485)
T ss_pred HhCcccCCC
Confidence 999998644
No 232
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.82 E-value=4.9e-08 Score=95.55 Aligned_cols=144 Identities=19% Similarity=0.291 Sum_probs=114.9
Q ss_pred hhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHH----HHHHHHHHhhhcc
Q 009816 110 ALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYL----VVQMLAGLFQSTG 185 (524)
Q Consensus 110 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~----~~r~l~G~~~~~~ 185 (524)
...|.+.+...++-.+.-...+++..|+|.|+++.++.+..++=..+.+.. .++.+... ....++|+..+..
T Consensus 243 ~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~----~~~~~~~~~~~~l~q~lhG~tf~~~ 318 (400)
T PF03825_consen 243 STIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYF----SDPWPFIVALQLLGQLLHGLTFGLF 318 (400)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHh----cCCcHHHHHHHHHHHhhhhHHHHHH
Confidence 556777777778888888999999999999999999999998888787774 23444333 3355799999999
Q ss_pred hhhHHHHHhhccccccccceehhhhhh-hhhHHHHHHHHHHHhhh-cC------chhHHHHhHHHHHHHHHHHHHhcCCC
Q 009816 186 WPSVVAVVGNWFGKSKRGLIMGIWNAH-TSIGNITGSLVASALLT-YG------WGWSFVVPGLIIAFVGLIVFLFLPVN 257 (524)
Q Consensus 186 ~~~~~~~i~~~~~~~~r~~~~~~~~~~-~~~G~~ig~~l~~~l~~-~g------wr~~f~~~~~~~~~~~~~~~~~~~~~ 257 (524)
+.+...++.+..|++.|+++.+++... .++|..+|..++|++.+ +| |...+.+.+++.++..++.+++.+|+
T Consensus 319 ~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 319 HAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred HHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 999999999999999999999998874 68999999999999984 33 55666777776666666666665543
No 233
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.80 E-value=4.8e-07 Score=79.50 Aligned_cols=333 Identities=15% Similarity=0.085 Sum_probs=174.6
Q ss_pred hhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhH
Q 009816 110 ALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSV 189 (524)
Q Consensus 110 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~ 189 (524)
.++|.+.-+.+-...+.+.+.|.++|+-|||+.-+.-++...++++ .-.+ +.|-.++++|++-|+..+..+.+.
T Consensus 72 G~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCi-TKhS-----pqYkVLmVGR~LGGiaTsLLFSaF 145 (454)
T KOG4332|consen 72 GDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCI-TKHS-----PQYKVLMVGRVLGGIATSLLFSAF 145 (454)
T ss_pred CccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHH-hhcC-----CceEEEeehhhhhhHHHHHHHHHH
Confidence 6778777777777788888999999999999975555444443332 2233 889999999999999999988887
Q ss_pred HHH-Hhhccccccccceehhhhh--------hhhhHHHHHHHHHHHhhh---cCchhHHHHhHHHHHHHHHHHHHhcCCC
Q 009816 190 VAV-VGNWFGKSKRGLIMGIWNA--------HTSIGNITGSLVASALLT---YGWGWSFVVPGLIIAFVGLIVFLFLPVN 257 (524)
Q Consensus 190 ~~~-i~~~~~~~~r~~~~~~~~~--------~~~~G~~ig~~l~~~l~~---~gwr~~f~~~~~~~~~~~~~~~~~~~~~ 257 (524)
.++ +.|.- ++|+.-.-+... ++.+=.+++.+.+..+.+ .|--.+|-..+.+..+... ..+..-
T Consensus 146 EsWliaEHn--ekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigmA---vil~~W 220 (454)
T KOG4332|consen 146 ESWLIAEHN--EKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGMA---VILSSW 220 (454)
T ss_pred HHHHHHHhh--hccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHH---HHHhhh
Confidence 776 45544 345543333322 233334444555555542 3555666654433332222 222221
Q ss_pred CCCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHH-HHHHHHHHHhhc
Q 009816 258 PESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYT-FLYWLPFYVSHT 336 (524)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 336 (524)
.+....+.++ ++ ...+.+...+.+..+.++..+.....+.-...+. ...|.|..--+.
T Consensus 221 ~ENygdps~~-kd--------------------lltqf~gaa~aiaSD~ki~LLG~iqsLFE~smytFVFLWTPaLspn~ 279 (454)
T KOG4332|consen 221 SENYGDPSEN-KD--------------------LLTQFKGAARAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPND 279 (454)
T ss_pred hhccCChhhh-HH--------------------HHHHhhHhHHHHhcchHHHHHHHHHHHHhhhhheeeeeecccCCCCc
Confidence 1111111100 00 0001122233445555554443333332222222 223444322111
Q ss_pred ccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhh--HHHHHHHHHHHHHHHHHHHh----hcchhHHHHHHHHH
Q 009816 337 AVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDAR--AITAASFMYCAIPALFFYRS----YGHLSLALNIALMF 410 (524)
Q Consensus 337 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~--~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 410 (524)
...--|++++.+.++.++|+-+..++..|-..| ..+.+.+.+......+.... ....+.....+.++
T Consensus 280 -------e~iPhGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~ 352 (454)
T KOG4332|consen 280 -------EEIPHGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFC 352 (454)
T ss_pred -------ccCCchhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHH
Confidence 122346788888899999988887777665433 22333333333222222111 11123344456666
Q ss_pred HHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHh--hccc--ChhHHHHHHHHHHH
Q 009816 411 ITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGY--ISAT--SWTAVFTMLMAAAL 486 (524)
Q Consensus 411 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~--l~~~--~~~~~~~~~~~~~~ 486 (524)
++-.+.+..++.+.-.-.+.+|+ +.|++ +.|.+.---.++.-...-- ..+. +-+..|-++.+...
T Consensus 353 ~~E~cvGlfwPSimkmRsqyIPE--------earst---imNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~ 421 (454)
T KOG4332|consen 353 LFEACVGLFWPSIMKMRSQYIPE--------EARST---IMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLF 421 (454)
T ss_pred HHHHHHhhcchHHHHHHHhhCCH--------HHHhh---hhhheechhhHhhhhhheecccccCccccchhhhhhHHHHH
Confidence 77778888899888888888875 44444 4444432222211111111 1111 55677777777666
Q ss_pred HHHHHH
Q 009816 487 ISGLLL 492 (524)
Q Consensus 487 ~~~~~~ 492 (524)
++.+..
T Consensus 422 ~a~i~~ 427 (454)
T KOG4332|consen 422 VASILQ 427 (454)
T ss_pred HHHHHH
Confidence 654443
No 234
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.79 E-value=2.7e-08 Score=99.92 Aligned_cols=174 Identities=14% Similarity=0.142 Sum_probs=144.5
Q ss_pred HHHHHHHHHHHHHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhhHhHHHHH
Q 009816 39 VLIVTFFAYTSYHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTALLGELDLA 118 (524)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~s~ 118 (524)
.+....+..........+..+.+|...++ .|.++ .+.+.+.++
T Consensus 299 ~fl~~~~~~~~~~~g~~~p~~~l~~~~~~------------------------------~g~~~-------~~aa~l~Si 341 (509)
T KOG2504|consen 299 KFLLLALSNLFAYLGFNVPFVYLPSYAKS------------------------------LGLSS-------NDAAFLLSI 341 (509)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhh------------------------------cCCCh-------hhhHHHHHH
Confidence 34445555555555666666667766665 77777 899999999
Q ss_pred HHHHHHhhhhhhhcccccCC--chhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHHHHhhc
Q 009816 119 FLSIYAGGMFFSGHLGDRLD--LRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVAVVGNW 196 (524)
Q Consensus 119 ~~l~~~~~~~~~G~l~Dr~G--rr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~ 196 (524)
..+...++.++.|+++|+.. ++.+..+++++.+++.+.++++ ++++.++..-++.|++.|........++.|.
T Consensus 342 igi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~-----~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~ 416 (509)
T KOG2504|consen 342 IGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFA-----TTYVGLIVFSILFGFCVGSFSSLTPVILVDL 416 (509)
T ss_pred HHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHh-----ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988 5567888888888888888887 9999999999999999999888888899999
Q ss_pred cccccccceehhhhhhhhhHHHHHHHHHHHhhh-c-CchhHHHHhHHHHHHHHHHHHHhcC
Q 009816 197 FGKSKRGLIMGIWNAHTSIGNITGSLVASALLT-Y-GWGWSFVVPGLIIAFVGLIVFLFLP 255 (524)
Q Consensus 197 ~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~-~-gwr~~f~~~~~~~~~~~~~~~~~~~ 255 (524)
.+.++...+.|+.....+++.++||++++.+.+ . +|...|+..++..++.++ .++..+
T Consensus 417 ~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~-~~~~~~ 476 (509)
T KOG2504|consen 417 VGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAV-LLLILR 476 (509)
T ss_pred cChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHH-HHHHhH
Confidence 999999999999999999999999999998774 3 499999998887776644 444444
No 235
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.73 E-value=1.4e-07 Score=89.68 Aligned_cols=133 Identities=31% Similarity=0.473 Sum_probs=110.4
Q ss_pred hHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHH
Q 009816 111 LLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVV 190 (524)
Q Consensus 111 ~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~ 190 (524)
+.++..+.+.++..++.++.|.+.||+|||+.+..+.....++.++.++... .+.+.+.+.|+++|++.+...+...
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~ 116 (338)
T COG0477 40 LYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPN---VGLALLLILRLLQGLGGGGLLPVAS 116 (338)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCcc---chHHHHHHHHHHHHhhhHHHHHHHH
Confidence 5789999999999999999999999999998888888766666666666510 2589999999999999999999999
Q ss_pred HHHhhcccc-ccccceehhhhh-hhhhHHHHHHHHHHHhhhc---CchhHHHHhHHHHHHH
Q 009816 191 AVVGNWFGK-SKRGLIMGIWNA-HTSIGNITGSLVASALLTY---GWGWSFVVPGLIIAFV 246 (524)
Q Consensus 191 ~~i~~~~~~-~~r~~~~~~~~~-~~~~G~~ig~~l~~~l~~~---gwr~~f~~~~~~~~~~ 246 (524)
+++.|++|+ ++|+...+.... ...+|..++|.+++.+... +||+.|.+........
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (338)
T COG0477 117 ALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLGLLL 177 (338)
T ss_pred HHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 999999987 678888888888 5888999999888877743 8999777766555433
No 236
>PRK09848 glucuronide transporter; Provisional
Probab=98.71 E-value=7.8e-08 Score=96.89 Aligned_cols=116 Identities=14% Similarity=0.048 Sum_probs=94.1
Q ss_pred hhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhH
Q 009816 110 ALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSV 189 (524)
Q Consensus 110 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~ 189 (524)
...++......++..++.++++++.||+|+|+++.++.++.+++.++..+. ..++++.+++..++.|+|.+...+..
T Consensus 264 ~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~---~~~~~~~~~~~~~l~g~G~~~~~~~~ 340 (448)
T PRK09848 264 LFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWV---SVWSLPVALVALAIASIGQGVTMTVM 340 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc---CchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444455567788899999999999999999999998888887777653 12467777778889999999999999
Q ss_pred HHHHhhccccc-------cccceehhhhhhhhhHHHHHHHHHHHhh
Q 009816 190 VAVVGNWFGKS-------KRGLIMGIWNAHTSIGNITGSLVASALL 228 (524)
Q Consensus 190 ~~~i~~~~~~~-------~r~~~~~~~~~~~~~G~~ig~~l~~~l~ 228 (524)
.++++|..|.+ ++|...+..+....+|..+|+.+.+.+.
T Consensus 341 ~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l 386 (448)
T PRK09848 341 WALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFIL 386 (448)
T ss_pred HHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988754 3488889999999999999998888775
No 237
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.67 E-value=3.5e-06 Score=87.27 Aligned_cols=142 Identities=14% Similarity=0.102 Sum_probs=111.5
Q ss_pred hhHhHHHHHHHHHHHhhhhhhhccccc-CCchhhHHHHHHHHHHHHHHHhccccccc---hhHHHHHHHHHHHHHhhhcc
Q 009816 110 ALLGELDLAFLSIYAGGMFFSGHLGDR-LDLRIFLTVGMVGTGLFTSLYGIGYWGNV---HSFYYYLVVQMLAGLFQSTG 185 (524)
Q Consensus 110 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr-~Grr~~l~~~~~~~~~~~~~~~~a~~~~~---~~~~~~~~~r~l~G~~~~~~ 185 (524)
++...+...+....-+.++++|+++|+ +||++.++++.++..++.++.+++..... ......+++-.+..+|.|+.
T Consensus 23 ~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~G~Ggi 102 (654)
T TIGR00926 23 STSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIALGTGGI 102 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHhhcccc
Confidence 677777788888888899999999996 69999999999999999988877422111 12234566777788899999
Q ss_pred hhhHHHHHhhccccc---cccceehhhhhhhhhHHHHHHHHHHHhh-hc-------CchhHHHHhHHHHHHHHHHHH
Q 009816 186 WPSVVAVVGNWFGKS---KRGLIMGIWNAHTSIGNITGSLVASALL-TY-------GWGWSFVVPGLIIAFVGLIVF 251 (524)
Q Consensus 186 ~~~~~~~i~~~~~~~---~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~-------gwr~~f~~~~~~~~~~~~~~~ 251 (524)
-|...+...|.++++ +|...+.++..+.++|..+++++..++. ++ +|...|.+.+++.++..++..
T Consensus 103 Kp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~ 179 (654)
T TIGR00926 103 KPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFM 179 (654)
T ss_pred ccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHH
Confidence 999999999999754 3667888999999999999998888876 32 599999998877766644433
No 238
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.62 E-value=1.4e-05 Score=74.21 Aligned_cols=311 Identities=14% Similarity=0.043 Sum_probs=166.0
Q ss_pred hhhhhhcccc-----cCCchhhHHH-HHHHHHHHHHHHhcccc------ccchhHHHHHHHHHHHHHhhhcchhhHHHHH
Q 009816 126 GMFFSGHLGD-----RLDLRIFLTV-GMVGTGLFTSLYGIGYW------GNVHSFYYYLVVQMLAGLFQSTGWPSVVAVV 193 (524)
Q Consensus 126 ~~~~~G~l~D-----r~Grr~~l~~-~~~~~~~~~~~~~~a~~------~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i 193 (524)
.-++|.++.| |+||||..++ +..+.+....+.+.-.- ...++...+...-++.-+..+.-..+.-...
T Consensus 79 LKllWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwA 158 (510)
T KOG3574|consen 79 LKLLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWA 158 (510)
T ss_pred HHHHHHhhhHHHHHHhhccccceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHH
Confidence 4578899999 9999986433 33333322222222100 1123344444444556666666667777777
Q ss_pred hhccccccccceehhhhhhhhhHHHHHHHHHHHhhh--------cCch---------hHHHHhHHHHHHHHHHHHHhcCC
Q 009816 194 GNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALLT--------YGWG---------WSFVVPGLIIAFVGLIVFLFLPV 256 (524)
Q Consensus 194 ~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~--------~gwr---------~~f~~~~~~~~~~~~~~~~~~~~ 256 (524)
-.+..+++.|.+......+...|..++..+--.+.. .+|. ...++.+.+.++...+..+.-+|
T Consensus 159 LtmLs~e~lgyaST~q~Vg~~~GyfL~~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke 238 (510)
T KOG3574|consen 159 LTMLSRENLGYASTCQSVGQTAGYFLGNVVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKE 238 (510)
T ss_pred HHhcCHhhcCchhHHHHHHHhhhHHhhcceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCC
Confidence 777778888877776666666666666544322221 1232 12334455555555555444333
Q ss_pred CCCCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 009816 257 NPESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHT 336 (524)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (524)
.+++.. ++ .+....+..+-++++++-|.+..+.......-.++.+.-...+.-+.+
T Consensus 239 ~~~~~~-----~e------------------~~~~i~~~yk~l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle- 294 (510)
T KOG3574|consen 239 NDESVD-----EE------------------LELGIHESYKLLRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLE- 294 (510)
T ss_pred Cchhhh-----hh------------------hhcCHHHHHHHHHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHH-
Confidence 322210 00 000112234456788888988888877777777777777777888888
Q ss_pred ccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhh------hhhHHHHHHHHHHHHHHHHHHHhhcc------hhHHH
Q 009816 337 AVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRL------DARAITAASFMYCAIPALFFYRSYGH------LSLAL 404 (524)
Q Consensus 337 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~------~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 404 (524)
+|++..+.+++..+.-...++.....|++.... -|+-...+....+........-.... .....
T Consensus 295 ----~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta~~~pl~~~lka~~~R~~~~~~~t~Lv~~~~~~~~~~G~~~~~~~i 370 (510)
T KOG3574|consen 295 ----HGVPKEELALIAVPLVPLQIALPLYIGKWTAGPRPLNVFLKAVPYRLGGGLVQTALVWWTPTLGHSDGTFPRGYYI 370 (510)
T ss_pred ----cCCChhHheeeeeehhhHHHhhhhhheeecCCCCcchHHHHhhhHHHHHHHHHHHHHhhhcccccCCCceeechHH
Confidence 499999988776444444444444444443311 11111112111111111111100000 01111
Q ss_pred -HHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc
Q 009816 405 -NIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT 472 (524)
Q Consensus 405 -~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 472 (524)
.+....+.+.+.-..+...+...++..+ +..-|+.+.+.|...++|+-.-..++.++.|.
T Consensus 371 l~i~~y~~~~~~~ts~fv~~maf~aqisd--------p~iggTymTlLNTLsnLGg~wp~tv~l~l~D~ 431 (510)
T KOG3574|consen 371 LLITSYAFHQVFVTSMFVSGMAFHAQISD--------PAIGGTYMTLLNTLSNLGGNWPGTVALWLADG 431 (510)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhhcCC--------cccCccHHHHHHHHHHhcCCcHHHHHHHhccc
Confidence 1112223333333333344444444444 45669999999999999999888888888874
No 239
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.61 E-value=5.3e-07 Score=90.89 Aligned_cols=152 Identities=11% Similarity=0.121 Sum_probs=117.7
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccc--c---ccchhHHHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGY--W---GNVHSFYYYL 172 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~--~---~~~~~~~~~~ 172 (524)
+|+++ .+.|.+.....++..++....+++.+|++.|+++.++.++.+++.+...... + ...++.+.+.
T Consensus 283 lG~s~-------~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~ 355 (468)
T TIGR00788 283 LPGGP-------SFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVL 355 (468)
T ss_pred CCCCc-------chhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeee
Confidence 77777 8999999999999999999999999999999999999999988876653210 0 0013344566
Q ss_pred HHHHHHHHhhhcchhhHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhhh-cC-----c--hhHHHHhHHHHH
Q 009816 173 VVQMLAGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALLT-YG-----W--GWSFVVPGLIIA 244 (524)
Q Consensus 173 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~-~g-----w--r~~f~~~~~~~~ 244 (524)
..-++.+++.+....+...++.+..|+++++...++.....++|..+++.+++.+.+ .| . ++...+...+.-
T Consensus 356 ~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~~ 435 (468)
T TIGR00788 356 GDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLAP 435 (468)
T ss_pred ehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHH
Confidence 677888999898889999999999999999999999999999999999999999884 33 3 333333333333
Q ss_pred HHHHHHHHhcCC
Q 009816 245 FVGLIVFLFLPV 256 (524)
Q Consensus 245 ~~~~~~~~~~~~ 256 (524)
+..+....++|+
T Consensus 436 l~~l~~~~llP~ 447 (468)
T TIGR00788 436 LLPLPLLHLLPR 447 (468)
T ss_pred HHHHHHHHhCCC
Confidence 333444456776
No 240
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.59 E-value=3e-07 Score=94.59 Aligned_cols=138 Identities=20% Similarity=0.296 Sum_probs=118.1
Q ss_pred CCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhh
Q 009816 341 KYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPY 420 (524)
Q Consensus 341 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 420 (524)
.+.+.....+..+++.++..+|.++.|.++||+|||+++.++.++..++.+...+ ..+.+..++.-++.|++.++..
T Consensus 113 ~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~---a~~~~~~~~~Rfl~G~~~~~~~ 189 (521)
T KOG0255|consen 113 VCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAF---APNYWMFLIFRFLSGFFGSGPL 189 (521)
T ss_pred eeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHH---hCcHHHHHHHHHHHHhhccchh
Confidence 4667778888899999999999999999999999999999999988888766554 4788888999999999999999
Q ss_pred HHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhcccChhHHHHHHHHHHHHHHHH
Q 009816 421 ALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISATSWTAVFTMLMAAALISGLL 491 (524)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 491 (524)
.....+..|.+++ +.|+.+..+ ..+...++.+++...+++.. +|++.+++..+..++..++
T Consensus 190 ~~~~~~~~E~~~~--------~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~-~Wr~~~~~~~~~~~~~~~~ 250 (521)
T KOG0255|consen 190 TVGFGLVAEIVSP--------KQRGLALTL-GGFFFVGGLMLPAGAAYITR-DWRWLFWIISIPSGLFLLL 250 (521)
T ss_pred HHhHhhheeecCc--------chhhHHHHH-HHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHH
Confidence 9999999998884 778888888 77788888889988888877 6999998887777665554
No 241
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.57 E-value=0.00026 Score=68.73 Aligned_cols=182 Identities=16% Similarity=0.017 Sum_probs=92.2
Q ss_pred hcchhhHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhhh--c---Cch------------hHHHHhHHHHHH
Q 009816 183 STGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALLT--Y---GWG------------WSFVVPGLIIAF 245 (524)
Q Consensus 183 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~--~---gwr------------~~f~~~~~~~~~ 245 (524)
+--..+.-...-....+++++.+..-...+.++|..++..+--.+.+ + -+| .-..+.+.+.++
T Consensus 133 ATQDIAVDGWALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvFlalns~~f~Nky~r~~p~~~glvtl~~yl~fwg~~~l~ 212 (544)
T PF13000_consen 133 ATQDIAVDGWALTMLSPENVGYASTCQTVGQTAGYFLSFTVFLALNSPDFCNKYLRSTPSDEGLVTLSGYLKFWGWVFLI 212 (544)
T ss_pred ccCCceeehhhhhhcChhhcchHHHHHHhHhhhhHHHHHHHHHhhCCHHHHHHhcccCCCCCCeeeHHHHHHHHHHHHHH
Confidence 33334444444555667777776666555555555555444333321 1 011 123344555556
Q ss_pred HHHHHHHhcCCCCCCCCCCCccccccCCcc-c----cCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHH
Q 009816 246 VGLIVFLFLPVNPESVGTDTNEEDESLSPK-K----IGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKL 320 (524)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (524)
..+...++-+|.|......+.+.......+ + +.++.+....++....++......+++|.|.+..+.+.....-.
T Consensus 213 ~T~~v~~~k~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Y~~l~~ilkLp~V~~li~ilL~~Ki 292 (544)
T PF13000_consen 213 VTILVAFFKKEKPHSESLPKIEPINKSDGKSKEISIEYDESDVISTEEILSIKDVYKSLWKILKLPNVQTLIIILLTAKI 292 (544)
T ss_pred HHHHHheEeecccccccCccccccccccccccccceecccccccchhhhhhHHHHHHHHHHHHcCchHHHHHHHHHHHHh
Confidence 656666666665533221111110000000 0 00000000011112233455667788999999888888777777
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHH
Q 009816 321 VAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHI 369 (524)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l 369 (524)
++...-.....-+.+ .|++.+..+.+..+..-..++..+..+++
T Consensus 293 gF~a~da~T~LKLlE-----kG~~KE~LAl~~li~~P~qii~~~~~~Kw 336 (544)
T PF13000_consen 293 GFQANDAVTSLKLLE-----KGLSKEDLALLVLIDFPFQIILPYYIGKW 336 (544)
T ss_pred ccccchhhhHHHHHH-----cCCCHHHhHHHHHHhhhHHHHHHHHhhhh
Confidence 766655666666667 59999988776655444444444444444
No 242
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.57 E-value=1.4e-06 Score=88.34 Aligned_cols=143 Identities=10% Similarity=0.014 Sum_probs=93.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhh----hhhhHHH-HHHHHHHH
Q 009816 313 LCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDR----LDARAIT-AASFMYCA 387 (524)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~~~~~~~-~~~~~~~~ 387 (524)
+..+..+........+++.|+++. .|+++..+|.++.+.-+...+..++.|+++|| +||||.. ..+...++
T Consensus 13 ~g~~~~~~~~~~~~~~l~~yyt~v----~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~ 88 (473)
T PRK10429 13 FGAFGKDFAIGIVYMYLMYYYTDV----VGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANS 88 (473)
T ss_pred cchhHHhHHHHHHHHHHHHHHHHh----cCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHH
Confidence 344445556666778889999998 89999999999999999999999999999995 5886654 44555555
Q ss_pred HHHHHHHHhhcc--h--hHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhh
Q 009816 388 IPALFFYRSYGH--L--SLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGP 463 (524)
Q Consensus 388 ~~~~~~~~~~~~--~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~ 463 (524)
+...++.. .+. . ...+..+..++.+.++.....+..+...+..++ ++.|.+..+.......+|+.+.+
T Consensus 89 i~~~llf~-~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~-------~~eR~~l~~~~~~~~~ig~~~~~ 160 (473)
T PRK10429 89 VVLFLLFS-AHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLD-------KREREQLVPYPRFFASLAGFVTA 160 (473)
T ss_pred HHHHHHHc-CCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCC-------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 54444432 121 1 122334444455666666655666666554433 46677777776666666666655
Q ss_pred hhhH
Q 009816 464 LLTG 467 (524)
Q Consensus 464 ~~~g 467 (524)
.+..
T Consensus 161 ~~~~ 164 (473)
T PRK10429 161 GFTL 164 (473)
T ss_pred HHHH
Confidence 4433
No 243
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.57 E-value=3.3e-07 Score=91.71 Aligned_cols=116 Identities=18% Similarity=0.178 Sum_probs=101.2
Q ss_pred hhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhH
Q 009816 110 ALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSV 189 (524)
Q Consensus 110 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~ 189 (524)
...+.+...+.++..++.+++++++||+|+|+++..+.++.+++.++..+.. .++.+.+++.-++.|++.+...+..
T Consensus 260 ~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~~l~gi~~~~~~~~~ 336 (428)
T PF13347_consen 260 GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLG---PGSPWLVLILFILAGIGYGAFFVIP 336 (428)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHH---hhhHHHHHHHHHHhHhhhccccccc
Confidence 4567788899999999999999999999999999999999999999888851 1489999999999999999999999
Q ss_pred HHHHhhcccc-------ccccceehhhhhhhhhHHHHHHHHHHHhh
Q 009816 190 VAVVGNWFGK-------SKRGLIMGIWNAHTSIGNITGSLVASALL 228 (524)
Q Consensus 190 ~~~i~~~~~~-------~~r~~~~~~~~~~~~~G~~ig~~l~~~l~ 228 (524)
.++++|..+. ++.|...|.......+|..+++.+.+.+.
T Consensus 337 ~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l 382 (428)
T PF13347_consen 337 WAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLL 382 (428)
T ss_pred ccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHH
Confidence 9999999873 33477888888888899999988887775
No 244
>PRK09669 putative symporter YagG; Provisional
Probab=98.55 E-value=4.6e-07 Score=91.14 Aligned_cols=164 Identities=10% Similarity=0.064 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhh----hhhhHHHH-HHHHHHHHHH
Q 009816 316 FFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDR----LDARAITA-ASFMYCAIPA 390 (524)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~~~~~~~~-~~~~~~~~~~ 390 (524)
+..+........+++.|+.+. +|+++..+|.+..+.-+...+..++.|+++|| +||||..+ .+.+..++..
T Consensus 19 ~~~~~~~~~~~~~l~~~~t~~----~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~ 94 (444)
T PRK09669 19 TACNLVWQTVMLFLAYFYTDV----FGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVC 94 (444)
T ss_pred hhhhHHHHHHHHHHHHHHHHh----cCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHH
Confidence 333444555667888888888 89999999999999999999999999999999 56655544 4545554544
Q ss_pred HHHHHhhc---chhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhH
Q 009816 391 LFFYRSYG---HLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTG 467 (524)
Q Consensus 391 ~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g 467 (524)
.++..... .....+..+...+.+.+......+..+..++...+ ++.|++..+.......+|..+++.+..
T Consensus 95 ~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~-------~~eR~~l~~~r~~~~~~G~~i~~~~~~ 167 (444)
T PRK09669 95 LLTFYTPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITND-------PRERHSLQSWRFALSFIGGLIVSVIAL 167 (444)
T ss_pred HHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCC-------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 43332211 11233444444455555555555555555544332 356777777777777777777665433
Q ss_pred h----hcc---c-ChhHHHHHHHHHHHHHHH
Q 009816 468 Y----ISA---T-SWTAVFTMLMAAALISGL 490 (524)
Q Consensus 468 ~----l~~---~-~~~~~~~~~~~~~~~~~~ 490 (524)
. +.+ . +|...+.+.+++.+++.+
T Consensus 168 pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~ 198 (444)
T PRK09669 168 PLVDILGKGDEQKGYFYAMMVMGLLGVVLFF 198 (444)
T ss_pred HHHHHhCCCchhhhHHHHHHHHHHHHHHHHH
Confidence 2 221 1 555566656555554443
No 245
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.54 E-value=8.3e-07 Score=88.44 Aligned_cols=145 Identities=21% Similarity=0.284 Sum_probs=117.2
Q ss_pred CCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhh
Q 009816 341 KYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPY 420 (524)
Q Consensus 341 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 420 (524)
.++...+.+.+.+++.++.+++.+.++.+.||++..+.+....+...+..++-.. ..+.+..++.-++.|++-++.+
T Consensus 76 l~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~---~~s~~~~ialr~llGl~es~~w 152 (495)
T KOG2533|consen 76 LKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAA---VHSFPGLIALRFLLGLFESGGW 152 (495)
T ss_pred cchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHH---HhhhHHHHHHHHHHHHHhcccc
Confidence 5677888999999999999999999999999999666555544444333323222 3567788888999999999999
Q ss_pred HHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhcc-------cChhHHHHHHHHHHHHHHHHHH
Q 009816 421 ALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISA-------TSWTAVFTMLMAAALISGLLLT 493 (524)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-------~~~~~~~~~~~~~~~~~~~~~~ 493 (524)
|....++..-+. ++.++..+|+..+...+|+++|+.++..+.. .||++.|++-+++.++..++.+
T Consensus 153 P~~~~~lg~wy~--------~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f 224 (495)
T KOG2533|consen 153 PGVVAILGNWYG--------KSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVF 224 (495)
T ss_pred hHHHHHHHhhcC--------hhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEE
Confidence 999999998887 3667999999999999999999999888532 2999999999998887776665
Q ss_pred HHH
Q 009816 494 RLV 496 (524)
Q Consensus 494 ~~~ 496 (524)
++.
T Consensus 225 ~~l 227 (495)
T KOG2533|consen 225 FFL 227 (495)
T ss_pred EEe
Confidence 444
No 246
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.53 E-value=2.9e-06 Score=76.39 Aligned_cols=152 Identities=20% Similarity=0.195 Sum_probs=104.2
Q ss_pred HHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcc--
Q 009816 322 AYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGH-- 399 (524)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 399 (524)
.+.+..+-|.. ++. +|++.++...+.....++..+| ++.|.+.|++|.+.++.++.....++...+......
T Consensus 18 ~Y~Fs~yS~~L-k~~----l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i 91 (250)
T PF06813_consen 18 TYTFSAYSPQL-KSR----LGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRI 91 (250)
T ss_pred ccchhhhhHHH-HHH----hCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 34444444444 444 7999999999999999998774 888999999999999999998888887776554322
Q ss_pred --hhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhcccChhHH
Q 009816 400 --LSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISATSWTAV 477 (524)
Q Consensus 400 --~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~ 477 (524)
.+.|......++.+.+.............+++| +.||++.|+.-....+++.+-..+...+.+.+...-
T Consensus 92 ~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP---------~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~f 162 (250)
T PF06813_consen 92 PSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP---------RSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSF 162 (250)
T ss_pred CccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc---------cccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHH
Confidence 234444444444444443444444455556665 567999999999999998888888777766644444
Q ss_pred HHHHHHHHHHH
Q 009816 478 FTMLMAAALIS 488 (524)
Q Consensus 478 ~~~~~~~~~~~ 488 (524)
+.+.+....+.
T Consensus 163 ll~la~~~~~v 173 (250)
T PF06813_consen 163 LLFLAVLPAVV 173 (250)
T ss_pred HHHHHHHHHHH
Confidence 44444444333
No 247
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.46 E-value=2.3e-07 Score=85.39 Aligned_cols=129 Identities=15% Similarity=0.217 Sum_probs=93.8
Q ss_pred HHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHHHHhhcccc
Q 009816 120 LSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVAVVGNWFGK 199 (524)
Q Consensus 120 ~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 199 (524)
.+.-.-|.++.+++.||+|||+.|.++.+++++..++......++. ...+++.+|++.. ..+.+.+.|..|.+|.
T Consensus 391 slaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~-~tvllf~arafis----g~fqvaYvYtPEVyPT 465 (528)
T KOG0253|consen 391 SLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNA-YTVLLFTARAFIS----GAFQVAYVYTPEVYPT 465 (528)
T ss_pred HHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcch-hHHHHHHHHHHHh----chheEEEEecCcccch
Confidence 3455668889999999999999999999999998888777522111 1223445555543 3455668899999999
Q ss_pred ccccceehhhhhhhhhHHHHHHHHHHHhhhcCchhHHHHhHHHHHHHHHHHHHhcC
Q 009816 200 SKRGLIMGIWNAHTSIGNITGSLVASALLTYGWGWSFVVPGLIIAFVGLIVFLFLP 255 (524)
Q Consensus 200 ~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~gwr~~f~~~~~~~~~~~~~~~~~~~ 255 (524)
+-|+...|..+...-+|.++.|.++ .....+-..+..+.+.+.++.++...+ +|
T Consensus 466 avRatgvGtcSsmaRIggI~~p~iA-~~~e~s~sl~i~vy~~~~ilagIavcf-fP 519 (528)
T KOG0253|consen 466 AVRATGVGTCSSMARIGGIFSPVIA-MRAELSTSLPIFVYGALFILAGIAVCF-FP 519 (528)
T ss_pred hhhhcchhhhhhHHhhhhhhhhHHH-HHhccceeehHHHHHHHHHHHHHHhee-ee
Confidence 9999999999999999999999999 333333444555556666666554444 44
No 248
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.43 E-value=1.6e-05 Score=73.82 Aligned_cols=140 Identities=19% Similarity=0.156 Sum_probs=116.8
Q ss_pred CCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhh
Q 009816 341 KYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPY 420 (524)
Q Consensus 341 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 420 (524)
+|.|...+|++.++..++..+.+++..++.+|+|.++.+..+.++.+++..+=.. .+.+..+....+.|.+.+..+
T Consensus 42 ~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~----~~~~~L~~gt~l~G~gIav~n 117 (395)
T COG2807 42 LGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSL----GGLPLLFLGTLLAGAGIAVIN 117 (395)
T ss_pred hcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhc----ccHHHHHHHHHHHHhhHHHHH
Confidence 6999999999999999999999999999999999999998888777776554321 245666777888899999999
Q ss_pred HHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc--ChhHHHHHHHHHHHHHHHHHH
Q 009816 421 ALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT--SWTAVFTMLMAAALISGLLLT 493 (524)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~--~~~~~~~~~~~~~~~~~~~~~ 493 (524)
...+..+-+++| +..+..+|++.....+++++++.+.-.+.++ +|+....+-+..++++.++.+
T Consensus 118 VLLPslIK~~Fp---------k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~Wl 183 (395)
T COG2807 118 VLLPSLIKRDFP---------KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWL 183 (395)
T ss_pred HhhhHHHHhhcc---------cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHh
Confidence 999999988887 6678999999999999999999988888777 699888888777776655443
No 249
>PRK11462 putative transporter; Provisional
Probab=98.43 E-value=4.8e-06 Score=83.87 Aligned_cols=143 Identities=8% Similarity=0.018 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhh----hhhHHHH-HHHHHHHH
Q 009816 314 CLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRL----DARAITA-ASFMYCAI 388 (524)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~----~~~~~~~-~~~~~~~~ 388 (524)
.-+..+........++..|+.+. .|+++..+|.++.+.-+...+.-++.|+++||. ||||..+ ++.+..++
T Consensus 17 g~~~~~~~~~~~~~~l~~fyt~~----~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i 92 (460)
T PRK11462 17 GDAASHIIFDNVMLYMMFFYTDI----FGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGI 92 (460)
T ss_pred chhhhhHHHHHHHHHHHHHHHHh----hCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHH
Confidence 33344455556667888888888 899999999999999999999999999999974 7766554 44455555
Q ss_pred HHHHHHHhhcchh----HHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhh
Q 009816 389 PALFFYRSYGHLS----LALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPL 464 (524)
Q Consensus 389 ~~~~~~~~~~~~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~ 464 (524)
...++.. .+..+ ..+..+..+++..++.....+..+...+..++ ++.|++..+.......+|..+++.
T Consensus 93 ~~~llf~-~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d-------~~eRt~l~s~r~~~~~iG~~~~~~ 164 (460)
T PRK11462 93 VCVLAYS-TPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITND-------PTQRISLQSWRFVLATAGGMLSTV 164 (460)
T ss_pred HHHHHHh-CCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCC-------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5544432 22111 23344455556666666666666666655443 577889999888888888777766
Q ss_pred hhHh
Q 009816 465 LTGY 468 (524)
Q Consensus 465 ~~g~ 468 (524)
+...
T Consensus 165 ~~~p 168 (460)
T PRK11462 165 LMMP 168 (460)
T ss_pred HHHH
Confidence 6443
No 250
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.40 E-value=1.1e-05 Score=76.60 Aligned_cols=142 Identities=19% Similarity=0.212 Sum_probs=118.7
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhcccc-cCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGD-RLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQM 176 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~D-r~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~ 176 (524)
||++. .|...+......|..++....|++.. |.++++...+++....++..+..++. ...+.+.+...-+
T Consensus 239 fgmsv-------~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~--~~~~~~~~~~~~~ 309 (403)
T PF03209_consen 239 FGMSV-------GETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAG--PLGSPWLFRPGVF 309 (403)
T ss_pred cCCCH-------HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHH--hcccchHHHHHHH
Confidence 88887 88999999999999999999999877 67888888888888887777665541 2467889999999
Q ss_pred HHHHhhhcchhhHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhhhc-----------CchhHHHHhHHHHHH
Q 009816 177 LAGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALLTY-----------GWGWSFVVPGLIIAF 245 (524)
Q Consensus 177 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~-----------gwr~~f~~~~~~~~~ 245 (524)
+.|++.|.......+.+.+...+++-|..+|.+.....++..+|..+++.+.+. +|..+|.+.++..++
T Consensus 310 l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~ 389 (403)
T PF03209_consen 310 LLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLA 389 (403)
T ss_pred HHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999887641 366677777766555
Q ss_pred HHH
Q 009816 246 VGL 248 (524)
Q Consensus 246 ~~~ 248 (524)
...
T Consensus 390 a~~ 392 (403)
T PF03209_consen 390 ALV 392 (403)
T ss_pred HHH
Confidence 533
No 251
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.36 E-value=8.9e-06 Score=79.41 Aligned_cols=149 Identities=15% Similarity=0.081 Sum_probs=105.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhh----hhhHHH-HHHHHHH
Q 009816 312 ALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRL----DARAIT-AASFMYC 386 (524)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~----~~~~~~-~~~~~~~ 386 (524)
...-+..++.......++..|+.+. .|+++..+|.++.+.=+...+.-++.|.++||. ||+|.. +.+.+..
T Consensus 18 g~gd~~~~~~~~~~~~yLl~fYTdv----~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~ 93 (467)
T COG2211 18 GLGDFASNFAFGIVVLYLLFFYTDV----FGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPF 93 (467)
T ss_pred cchhhHHHHHHHHHHHHHHHHHhcc----cCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHH
Confidence 3444555566667778899999999 899999999999999999999999999999975 555554 4444555
Q ss_pred HHHHHHHHHhhc---chhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhh
Q 009816 387 AIPALFFYRSYG---HLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGP 463 (524)
Q Consensus 387 ~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~ 463 (524)
++...+.....+ ........+...+.++++.....+..+..++.-.+ ++.|.+..+.-..+..+|..+..
T Consensus 94 ~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d-------~~ER~~l~s~R~~~~~~g~~l~~ 166 (467)
T COG2211 94 AIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQD-------PQERASLTSWRMVFASLGGLLVA 166 (467)
T ss_pred HHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCC-------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 554444443221 13445556667778888877777666666655443 57788888888888888877666
Q ss_pred hhhHhhcc
Q 009816 464 LLTGYISA 471 (524)
Q Consensus 464 ~~~g~l~~ 471 (524)
.+.+.+..
T Consensus 167 ~~~~plv~ 174 (467)
T COG2211 167 VLFPPLVK 174 (467)
T ss_pred HHHHHHHH
Confidence 65555543
No 252
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.34 E-value=5.1e-06 Score=68.92 Aligned_cols=107 Identities=15% Similarity=0.194 Sum_probs=92.6
Q ss_pred HHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHHHHhh
Q 009816 116 DLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVAVVGN 195 (524)
Q Consensus 116 ~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~ 195 (524)
.++......+++++.+.+.+++|.|+.++++.+...+-.+.... ++.+.++.+-++.|++.+..+.+...++.+
T Consensus 43 lai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~------~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~ 116 (156)
T PF05978_consen 43 LAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFY------PNSYTLYPASALLGFGAALLWTAQGTYLTS 116 (156)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh------hhHHHHHHHHHHHhhhhHHhhHhhhHHHHH
Confidence 35566667778888889999999999999999998866665544 788999999999999999999999999999
Q ss_pred ccccccccceehhhhhhhhhHHHHHHHHHHHhh
Q 009816 196 WFGKSKRGLIMGIWNAHTSIGNITGSLVASALL 228 (524)
Q Consensus 196 ~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~ 228 (524)
..++++|++..+++......+.++|.++..++.
T Consensus 117 ~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 117 YSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred cCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999888887766553
No 253
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.34 E-value=0.00075 Score=67.39 Aligned_cols=263 Identities=12% Similarity=0.078 Sum_probs=144.8
Q ss_pred hhHhHHHHHHHH-HHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhcccccc-----ch-----------------
Q 009816 110 ALLGELDLAFLS-IYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGN-----VH----------------- 166 (524)
Q Consensus 110 ~~~g~~~s~~~l-~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~-----~~----------------- 166 (524)
+.+..+=....+ +..+...+-.+++++++|.+++-+....+.....++++-..+. .+
T Consensus 58 e~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~ 137 (491)
T PF03219_consen 58 EVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGF 137 (491)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHH
Confidence 455555554444 3345577789999999999998877777666666655521110 00
Q ss_pred ----hHHHHHHHHHHHHHhhhcchh-hHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhhh----------cC
Q 009816 167 ----SFYYYLVVQMLAGLFQSTGWP-SVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALLT----------YG 231 (524)
Q Consensus 167 ----~~~~~~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~----------~g 231 (524)
+.|.+.+.-++.-+-.....+ .-..+..|.++.+|-.|..+++..+.++|.++++.+...+.+ -.
T Consensus 138 i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~ 217 (491)
T PF03219_consen 138 IAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDA 217 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccc
Confidence 122222333333333233333 457788999999999999999999999999999888777765 13
Q ss_pred chhHHHHhHHHHHHHH---HHHHHhcCCCCCCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCc
Q 009816 232 WGWSFVVPGLIIAFVG---LIVFLFLPVNPESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGV 308 (524)
Q Consensus 232 wr~~f~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (524)
|...+.....+.++++ +.....+.+.....+... + +...+ ++++.+.....+++.++++|.+
T Consensus 218 ~~~~l~~l~~~v~~~g~~i~~~~~~~~~~vl~~~~~~-~-~~~~~-------------kk~k~k~s~~es~k~l~kS~yL 282 (491)
T PF03219_consen 218 WELSLNSLMGIVLILGIVIILLYRYMNKNVLTDPRFY-P-SAKKK-------------KKKKPKMSLKESFKLLLKSKYL 282 (491)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccc-h-hhhcc-------------cccCCCccHHHHHHHHHhCHHH
Confidence 5543322221111111 222223322111110000 0 00000 0000111134566778888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHH
Q 009816 309 APFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAI 388 (524)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~ 388 (524)
..+++...+.+..........-..+++..+++..++. -.|......++..++..++++.+.+|+|-+....+.-+.+.+
T Consensus 283 ~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysa-fmG~~~~~tGivtii~~~l~~~iir~~GW~~~AlitPiv~li 361 (491)
T PF03219_consen 283 LCIALLVIAYGISINLVEVVWKSQLKQLYPDPNDYSA-FMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALITPIVILI 361 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHH
Confidence 7777776666666555555444555554222212221 123445556677777778889999999988776655444433
No 254
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.30 E-value=7.4e-06 Score=80.19 Aligned_cols=181 Identities=14% Similarity=0.127 Sum_probs=114.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhh-hHHHHHHHHHHH
Q 009816 309 APFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDA-RAITAASFMYCA 387 (524)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~-~~~~~~~~~~~~ 387 (524)
+...+..++....+.......=.|+++. +.+-+..-.|++.+...++..+++++.|+...|.+. |+.++.+.+++.
T Consensus 37 ~l~~~~sfl~~v~~sI~~~s~wpYl~~l---D~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~ 113 (488)
T KOG2325|consen 37 YLALLNSFLVAVQFSIYLTSMWPYLQKL---DPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAI 113 (488)
T ss_pred HHHHHHHHHHhhhheEEEeecchhhhhc---CCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHH
Confidence 3344444444444333333444566652 147778888999999999999999999999999876 778888888888
Q ss_pred HHHHHHHH-hh-cchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhh
Q 009816 388 IPALFFYR-SY-GHLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLL 465 (524)
Q Consensus 388 ~~~~~~~~-~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~ 465 (524)
++.++... .. ++...++.+++-++.|++.+... ..-.+++..-. .+.|.++++..+....+|.++||.+
T Consensus 114 ~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a-~lR~Y~a~~s~--------~~dR~rA~a~~~~~~vlg~ilGp~~ 184 (488)
T KOG2325|consen 114 IGNLLYLALAYVPNGVKYLMLVARILTGVGVGNFA-VLRAYIADAST--------VEDRPRAFAATSGGFVLGIILGPTI 184 (488)
T ss_pred HHHHHHHHHHhcccchHHHHHHHHHHcCcCcccHH-HHHHHHHhccC--------ccchHHHHHHhhhHHHHHHHHhHHH
Confidence 88776632 22 22356667777778887754432 33334433222 3556677776666666777777765
Q ss_pred hHhhccc--------------ChhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009816 466 TGYISAT--------------SWTAVFTMLMAAALISGLLLTRLVVAEVA 501 (524)
Q Consensus 466 ~g~l~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (524)
...+... -|+.+-++++++.++..++.....+...+
T Consensus 185 q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~ 234 (488)
T KOG2325|consen 185 QLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYR 234 (488)
T ss_pred HHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeeccc
Confidence 4433221 36677778877777777666655544333
No 255
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.30 E-value=7.7e-06 Score=83.78 Aligned_cols=133 Identities=20% Similarity=0.311 Sum_probs=108.1
Q ss_pred hhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHH
Q 009816 347 MAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTA 426 (524)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 426 (524)
+.+++.+...+++.+++++.|+++|++|||+.+..+.+...++.++.... .+.....+.-++.|++.+........+
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a---~~~~~l~~GR~l~G~g~G~~~~~~piy 166 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALA---PSWYQLIVGRILTGLGVGGASVLAPVY 166 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh---hhHHHHHHHHHHhccchhhhhhcchhh
Confidence 44899999999999999999999999999999999999998888887653 477888888899999999988888888
Q ss_pred HHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc---ChhHHHHHHHHHHHHHHHH
Q 009816 427 VSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT---SWTAVFTMLMAAALISGLL 491 (524)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~---~~~~~~~~~~~~~~~~~~~ 491 (524)
.+|..| ++.||...+..+....+|..++ .+.+...+. +|+..+.+..+.+++..+.
T Consensus 167 ~sEiap--------~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~ 225 (513)
T KOG0254|consen 167 ISEIAP--------AHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALG 225 (513)
T ss_pred HhhcCC--------hhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHH
Confidence 887766 4788999999998888877777 555555543 6887777766665554444
No 256
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.29 E-value=1.1e-06 Score=85.06 Aligned_cols=134 Identities=16% Similarity=0.197 Sum_probs=117.3
Q ss_pred hhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhH
Q 009816 110 ALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSV 189 (524)
Q Consensus 110 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~ 189 (524)
...|.+...-..+-.+.-++.+++..|+|+-+++.+++.+.++=.+..+.. +|.|+.+...+++|+..+..|.+.
T Consensus 406 ~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L-----~n~W~vLPieilqgit~aliWaa~ 480 (618)
T KOG3762|consen 406 TLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYL-----QNPWMVLPIEILQGITHALIWAAI 480 (618)
T ss_pred eeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHh-----cCchheeeHHHHHHHHHHHHHHHH
Confidence 566766677777777888889999999999999999999999988888886 999999999999999999999999
Q ss_pred HHHHhhccccccccceehhhhhh-hhhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHH
Q 009816 190 VAVVGNWFGKSKRGLIMGIWNAH-TSIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGL 248 (524)
Q Consensus 190 ~~~i~~~~~~~~r~~~~~~~~~~-~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~ 248 (524)
.+|+++..||+-|+.+.++.+.. .++|.-+|.++||.+. .+|=|..|.+.++.+++..+
T Consensus 481 ~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~ 541 (618)
T KOG3762|consen 481 ISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLA 541 (618)
T ss_pred HHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHH
Confidence 99999999999999999988764 5689999999999988 57888889887776665533
No 257
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.29 E-value=6.7e-05 Score=70.19 Aligned_cols=146 Identities=10% Similarity=0.031 Sum_probs=102.3
Q ss_pred CCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhh
Q 009816 341 KYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPY 420 (524)
Q Consensus 341 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 420 (524)
+|++..+.+.++....+.+.+...+.|.++||+|||+.-+..+++..+.++.-. .++....++.=++.|+.....+
T Consensus 64 yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~----~~~~~~L~~GRvlgGiaTSLLf 139 (354)
T PF05631_consen 64 YGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKH----SSNYPVLLLGRVLGGIATSLLF 139 (354)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHh----ccccHHHHHHHHHHHHHHHHHH
Confidence 699999999999999999999999999999999999988877777777765432 3566777777788899888888
Q ss_pred HHHHHHHHhhhcccccCCCCccchhHHHHHHH-hhhhhhhhhhhhhhHhhccc---ChhHHHHHHHHHHHHHHHHHH
Q 009816 421 ALITTAVSADLGTHSSLKGNSRALATVTAIID-GTGSVGAAIGPLLTGYISAT---SWTAVFTMLMAAALISGLLLT 493 (524)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~-~~~~~g~~i~~~~~g~l~~~---~~~~~~~~~~~~~~~~~~~~~ 493 (524)
+..-++...+-..+ .-+++..+...+... ..+.+-.+.+..++.++.+. +...+|.....+..++.+++.
T Consensus 140 S~FEsW~V~Eh~~~---g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~ 213 (354)
T PF05631_consen 140 SAFESWMVHEHNKR---GFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLIL 213 (354)
T ss_pred HHHHHHHHHHHHHc---CCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHH
Confidence 88877776654322 222344555555444 22334445555555555554 346677777766666655443
No 258
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.26 E-value=1.6e-05 Score=82.49 Aligned_cols=164 Identities=10% Similarity=0.041 Sum_probs=121.0
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhh-hhhHHHHHHHHHHHHHHHHHHHhhcc
Q 009816 321 VAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRL-DARAITAASFMYCAIPALFFYRSYGH 399 (524)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (524)
.++++...+..|+.+. +|++...+..+...+....-+..+++|+++|++ |+++.+.++.++..++..++......
T Consensus 2 syYGm~aiLvlYl~~~----lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~ 77 (654)
T TIGR00926 2 SYYGMRTILVLYFLNF----LGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIP 77 (654)
T ss_pred ceeecHHHHHHHHHHH----cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCc
Confidence 3456677778888776 799999888888887777778888999999975 89998888888877776665432110
Q ss_pred -----hhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc--
Q 009816 400 -----LSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-- 472 (524)
Q Consensus 400 -----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-- 472 (524)
......++.+.+..++.++.-+...+...+.+++.+ ++.+-....+.....++|+.+++.+.+++.+.
T Consensus 78 ~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~-----~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~ 152 (654)
T TIGR00926 78 SSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQ-----LSLRSRFFSFFYFAINAGSLISTIITPILRGDVG 152 (654)
T ss_pred ccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccc-----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 112234556677778888888888888887765422 24567788888888999999999999988732
Q ss_pred ------ChhHHHHHHHHHHHHHHHHHH
Q 009816 473 ------SWTAVFTMLMAAALISGLLLT 493 (524)
Q Consensus 473 ------~~~~~~~~~~~~~~~~~~~~~ 493 (524)
+|...|.+.+++++++.++..
T Consensus 153 ~fg~~~~~~~aF~i~~i~m~ia~lvf~ 179 (654)
T TIGR00926 153 CFGCQDCYPLAFGVPAILMILALIVFM 179 (654)
T ss_pred ccccCcchHHHHHHHHHHHHHHHHHHH
Confidence 577888888887777666554
No 259
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.23 E-value=2.5e-08 Score=100.66 Aligned_cols=141 Identities=17% Similarity=0.177 Sum_probs=95.1
Q ss_pred HHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHh--ccccccch---hHHHHHHHHHHHHHhhhcchhhHHHHHh
Q 009816 120 LSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYG--IGYWGNVH---SFYYYLVVQMLAGLFQSTGWPSVVAVVG 194 (524)
Q Consensus 120 ~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~--~a~~~~~~---~~~~~~~~r~l~G~~~~~~~~~~~~~i~ 194 (524)
.+...++.++...+.||+|||++++.+.++.+++.+..+ .......+ ++..+.......-.......+....+..
T Consensus 296 ~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ 375 (451)
T PF00083_consen 296 GLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTA 375 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeeeecccccccccccccccccc
Confidence 344556677777999999999999999988888777775 11111111 2222222222111111133466668889
Q ss_pred hccccccccceehhhhhhhhhHHHHHHHHHHHhhh-cCchhHHHHhHHHHHHHHHHHHHhcCCCCCC
Q 009816 195 NWFGKSKRGLIMGIWNAHTSIGNITGSLVASALLT-YGWGWSFVVPGLIIAFVGLIVFLFLPVNPES 260 (524)
Q Consensus 195 ~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~-~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~ 260 (524)
|.+|.+.|+++.++......++..+++.+...+.+ .+-...|.+.+.+.++..+..++++||+...
T Consensus 376 ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET~g~ 442 (451)
T PF00083_consen 376 ELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPETKGK 442 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccchhhHHHHHHHHhheeEEEeeCCCC
Confidence 99999999999999999999999888887766663 3324556666777777777888889987543
No 260
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.23 E-value=1.4e-06 Score=63.17 Aligned_cols=80 Identities=21% Similarity=0.239 Sum_probs=71.9
Q ss_pred HHhhcccccccccccCCCCCCCCcCCccchhccccchhhhhhhhcccCCCCCCCCCCCchhhHhHHHHHHHHHHHhhhhh
Q 009816 50 YHAARKTTSIVKSTLDPQSPDTSLKSLPWRISYLQEPAESRKLSWKLGDGWAPFNGSDGTALLGELDLAFLSIYAGGMFF 129 (524)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~ 129 (524)
..+.|..+.+++|.+++| .+++. ++.|++.+..++||.+|.+.
T Consensus 4 mGigRFayTplLP~M~~~------------------------------~~ls~-------~~ag~lasaNy~GYL~GAl~ 46 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQAD------------------------------GGLSL-------SQAGWLASANYLGYLVGALL 46 (85)
T ss_pred hhhHHHHHHhHhHHHHHh------------------------------cCCCH-------HHHHHHHHHHHHHHHHHHHH
Confidence 356788899999999999 88887 99999999999999999999
Q ss_pred hhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHH
Q 009816 130 SGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYY 171 (524)
Q Consensus 130 ~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 171 (524)
..++.++..+++.+..+++...+..+.+++. ++++.+
T Consensus 47 ~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~-----~~~~~w 83 (85)
T PF06779_consen 47 ASRLPRHSRPRRLLRAGLLLTVLSTAAMALT-----HSFWLW 83 (85)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHHHHHHHH-----hchHHH
Confidence 9999999888999999999999999999995 666554
No 261
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.21 E-value=6.3e-06 Score=78.58 Aligned_cols=116 Identities=16% Similarity=0.247 Sum_probs=85.7
Q ss_pred CCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcch----hHHHHHHHHHHHHhhhh
Q 009816 342 YLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHL----SLALNIALMFITGMFVN 417 (524)
Q Consensus 342 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~ 417 (524)
++++...+.+..+..++.++|+++.|++.||+|||++.....+++.++.++..+....+ -.+++...=++.|++.+
T Consensus 80 ~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIG 159 (538)
T KOG0252|consen 80 HYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIG 159 (538)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhcccc
Confidence 36677778888899999999999999999999999998888877777776443322111 23344455578899999
Q ss_pred hhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhh
Q 009816 418 GPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLL 465 (524)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~ 465 (524)
+-+|...++.+|... .+.||.-.+...+++..|...|..+
T Consensus 160 GDYPlSAtI~SE~an--------~~~RGa~iaavFa~Qg~GilaG~iv 199 (538)
T KOG0252|consen 160 GDYPLSATIMSESAN--------KKTRGAFIAAVFAMQGFGILAGGIV 199 (538)
T ss_pred CCCcchHHHhhhhhh--------hccccceeEEEEEecchhHhhccHH
Confidence 999998888877655 3667877777766666665555544
No 262
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.15 E-value=2.6e-05 Score=56.16 Aligned_cols=71 Identities=23% Similarity=0.337 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHH
Q 009816 310 PFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMY 385 (524)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~ 385 (524)
.+-...++......+...++|.|+++. |+++.+.|.+.++..+..+++.++.|.++||.++++........
T Consensus 4 ~lk~~yf~~f~~~g~~~Pfl~~~~~~~-----Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 4 PLKAFYFFYFAALGCLYPFLPLYLKQL-----GLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHhhhhc-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 344556777778888899999999984 99999999999999999999999999999999999887665544
No 263
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=98.11 E-value=0.00043 Score=68.54 Aligned_cols=137 Identities=12% Similarity=0.023 Sum_probs=67.9
Q ss_pred HHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHH-Hhccc--cccchhHHHHHHHHHHHHHhhhcchhhHHHH
Q 009816 116 DLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSL-YGIGY--WGNVHSFYYYLVVQMLAGLFQSTGWPSVVAV 192 (524)
Q Consensus 116 ~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~-~~~a~--~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~ 192 (524)
.-...+...+..+..-.+..|+..|.=+..++++..+..++ ..+.. ......++..++.-++.|++.+.......++
T Consensus 51 ~~~~~v~~l~~~~~~~~~~~~i~~~~Ri~~~lv~~~~~~~~~~~l~~~~~~~~~~f~~~~~~v~~~g~~~~~~q~s~~gl 130 (437)
T TIGR00939 51 TLASQLPSLLFNSLNLFLIFRIPVTVRLLGGLVILLVVVILVMVLVKVQTSETGFFVTTMASVVIINSGMALLQGSLFGL 130 (437)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCccchhHHHHHHHHHHHHHHhheeeecCCcchHHHHHHHHHHHHHhhhhhhcccchhh
Confidence 33444444555555555666666432233333322211111 11110 1112357777788888999998888887777
Q ss_pred HhhccccccccceehhhhhhhhhHHHHHHHHHHHhh----h---cCch-hHHHHhHHHHHHHHHHHHHhcCCC
Q 009816 193 VGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL----T---YGWG-WSFVVPGLIIAFVGLIVFLFLPVN 257 (524)
Q Consensus 193 i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~----~---~gwr-~~f~~~~~~~~~~~~~~~~~~~~~ 257 (524)
.+ .+|++ .++.+..+.+++.+++.++--... + .-++ ..|+..+.+..++.++.+..+++.
T Consensus 131 a~-~fp~~----~~~a~~~G~g~aGv~~s~~~ii~~a~~~~~~~~~~~a~~YF~~a~~v~l~~i~~~~~l~k~ 198 (437)
T TIGR00939 131 AG-VFPST----YSSAVMSGQGLAGVLTSLAMILVKASGNDSHGLKKSALGYFGTPCVVQLICIVCYLLLPKL 198 (437)
T ss_pred cc-cCCHH----HHHHHHhcchhHHHHHHHHHHHHHHhcCCccchhhhhhhHHHHHHHHHHHHHHHHHHHhcC
Confidence 66 46643 345555566666655544432221 1 1111 234444444444445555555544
No 264
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=97.91 E-value=0.00041 Score=62.71 Aligned_cols=325 Identities=12% Similarity=0.098 Sum_probs=167.0
Q ss_pred HhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHH
Q 009816 112 LGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVA 191 (524)
Q Consensus 112 ~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~ 191 (524)
.|.+.-+-.+...+..+.+..+.||+.--+=..+..++.+.+.++.+++ ++.++-+.+-.+..++.|.....-.+
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs-----~s~~~sL~GV~~aSissGlGEiTFL~ 138 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFS-----NSVPMSLLGVVFASISSGLGEITFLA 138 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEec-----cchhHHHhhhhhhhhcCCcceeehhh
Confidence 4666667777888888888889998765444455566777888888887 88888888888888888776555444
Q ss_pred HHhhccccccccceehhhhhhhhhHHHHHHHHHHHhhh---cCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCccc
Q 009816 192 VVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALLT---YGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNEE 268 (524)
Q Consensus 192 ~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~---~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (524)
+ +..+++ ...+-++.+.+.+.++|..--..+.+ ++-|.+.+++..+.++.+...++.+++++.... +..++
T Consensus 139 l-ss~Y~~----~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~pes~~~-ptl~~ 212 (409)
T KOG3880|consen 139 L-SSRYPS----IVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSPESVYS-PTLQP 212 (409)
T ss_pred h-hccCCC----ceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCCccccC-CCcCc
Confidence 3 333433 34556666666666777654444443 467888888888888887777777665433321 22111
Q ss_pred cccCCccccC---CCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHH-HHHHHhhcccCCCCCC
Q 009816 269 DESLSPKKIG---EGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYW-LPFYVSHTAVDGKYLS 344 (524)
Q Consensus 269 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~ 344 (524)
+.....+... ...++...+++...+++...++. ....++-....++..+.++.- .+..+-+- ..|++
T Consensus 213 ~~~~~~~~~~~~~a~e~~sv~s~~~~~~e~~~~i~p------ll~~MvPL~~VY~~EY~INQGl~ell~F~c---~~g~s 283 (409)
T KOG3880|consen 213 STEIIPSQYLPFEAAEEKSVPSRRLGLKETLKRIKP------LLKYMVPLALVYFAEYFINQGLAELLLFPC---SHGFS 283 (409)
T ss_pred cceeccCCCCcccccccccCchhhhcHHHHHHHHHH------HHHHHHHHHHHHHHHHHHhhhhHhhEEecc---ccCCc
Confidence 1111100000 00000011111111111111222 222333333444444443322 22222110 02333
Q ss_pred hh---hhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhH
Q 009816 345 SE---MAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYA 421 (524)
Q Consensus 345 ~~---~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 421 (524)
.. +.-+....+.++..+.+-..... ++..-+.+.+...+-.+..++-......++.+...+..+.=|+..+..+.
T Consensus 284 ls~~sqYRwyqvlYQlGVFiSRSS~~~~--~~p~l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYV 361 (409)
T KOG3880|consen 284 LSKDSQYRWYQVLYQLGVFISRSSINLF--TMPYLWLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYV 361 (409)
T ss_pred cchhhcchhhheeeeeeEEEEeccceEE--echHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHH
Confidence 22 23355555555444433221111 11111222222222222222222223345566666666667888788887
Q ss_pred HHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhh
Q 009816 422 LITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLT 466 (524)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~ 466 (524)
...--+.++.++ +.|--+++.......+|..++..++
T Consensus 362 NTf~~i~~e~~p--------d~rEfamsavs~sDS~Gi~lA~~la 398 (409)
T KOG3880|consen 362 NTFHNIHKETEP--------DVREFAMSAVSISDSIGIFLAGLLA 398 (409)
T ss_pred HHHHHHhhcCCc--------hHHHHhHhhheecchhhHHHHHHHh
Confidence 777777776654 4455667766666666655555443
No 265
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=97.88 E-value=0.032 Score=54.63 Aligned_cols=261 Identities=10% Similarity=-0.048 Sum_probs=144.6
Q ss_pred hhHhHHHHHHHH-HHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccc-----------------h-----
Q 009816 110 ALLGELDLAFLS-IYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNV-----------------H----- 166 (524)
Q Consensus 110 ~~~g~~~s~~~l-~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~-----------------~----- 166 (524)
..+.++-+...+ +..+..++.+++.+++.+.+++-+-+..+....+++++...+.. +
T Consensus 61 e~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~ 140 (509)
T COG3202 61 ESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKW 140 (509)
T ss_pred hhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCcccee
Confidence 667788787777 66788899999999999999988888888877777776432110 0
Q ss_pred -----hHHHHHHHHHHHHHhhhcchh-hHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhhhc--C-------
Q 009816 167 -----SFYYYLVVQMLAGLFQSTGWP-SVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALLTY--G------- 231 (524)
Q Consensus 167 -----~~~~~~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~--g------- 231 (524)
+.|...+.-++.-+=.+.... .-.....|.+..+|-.|..+.+..+.+++..++..+..++.+. .
T Consensus 141 ~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~~ 220 (509)
T COG3202 141 FILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEFKD 220 (509)
T ss_pred eeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHHHH
Confidence 112222333333332233322 4456678889889999999999999999999988888777641 1
Q ss_pred --chhHHHHhHHHHHHHHHHHHHhcCCC-CCCCCCCCccccccCCccccCCCcccccccchhhhhhhhhhHHHHhcCCCc
Q 009816 232 --WGWSFVVPGLIIAFVGLIVFLFLPVN-PESVGTDTNEEDESLSPKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGV 308 (524)
Q Consensus 232 --wr~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (524)
-+..+.+.+..++++ +....++.+. .+...... +....++ +++.+-....+++.+.++|-+
T Consensus 221 ~~~~~~~~vi~~~~~i~-~~l~~~~~r~il~~~~f~~-~~~~kk~--------------~~k~k~~~~~s~k~i~~SkyL 284 (509)
T COG3202 221 LLLQILFIVIVILGIIA-ILLYRYINRNVLTDPLFYL-RAKKKKK--------------KKKLKLGLIESFKMILRSKYL 284 (509)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHhhcccCcchhH-HHhcccc--------------cccccCcHHHHHHHHHhhhHH
Confidence 233344444443433 2333333221 11111000 0000000 000001123456677788877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhh---hhhHHHHHHHH-HHhhhHHHHHHHhhhhhhHHHHHHHH
Q 009816 309 APFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEM---AGNLSTLFDVG-GVLGGILAGHISDRLDARAITAASFM 384 (524)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~-~~~~~~~~g~l~dr~~~~~~~~~~~~ 384 (524)
+.+.+...+.+.+...+...--.-.+.. +-...+. .|.+....++. .++...+++.+.+|.|-....++.-+
T Consensus 285 ~~ial~vl~Y~v~inLvE~~wKs~ik~~----~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~~~AlitPi 360 (509)
T COG3202 285 GAIALLVLAYGVSINLVEGVWKSGIKEL----YPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWFTGALITPL 360 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHh----cCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHH
Confidence 7777666665555444332222222222 1112222 23334444554 44556677888888887766555555
Q ss_pred HHHHHH
Q 009816 385 YCAIPA 390 (524)
Q Consensus 385 ~~~~~~ 390 (524)
...+..
T Consensus 361 v~litg 366 (509)
T COG3202 361 VMLITG 366 (509)
T ss_pred HHHHHH
Confidence 544443
No 266
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.86 E-value=0.00062 Score=67.67 Aligned_cols=118 Identities=12% Similarity=0.214 Sum_probs=105.1
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhh-cccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSG-HLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQM 176 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G-~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~ 176 (524)
++|++ .+.+...+.......+++++.. .+...+|-|++..+|+....+..++.+++ ++.|+++...+
T Consensus 272 f~w~~-------~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~-----~~~w~~~~~~v 339 (463)
T KOG2816|consen 272 FGWNK-------KEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFA-----TETWMMFAAGV 339 (463)
T ss_pred cCcCH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHh-----ccchhhhHHHH
Confidence 88888 9999888888888888887777 78888999999999999999999999998 89999999888
Q ss_pred HHHHhhhcchhhHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhh
Q 009816 177 LAGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL 228 (524)
Q Consensus 177 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~ 228 (524)
+.++. ....|...+.++.+.+++++|+++++.+..-.+..+++|.+-+.+.
T Consensus 340 ~~~~~-~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~ 390 (463)
T KOG2816|consen 340 VVALA-GIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIF 390 (463)
T ss_pred HHHhh-cchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHH
Confidence 88776 5678999999999999999999999999999999999998877765
No 267
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=97.85 E-value=0.0014 Score=66.94 Aligned_cols=138 Identities=13% Similarity=0.040 Sum_probs=103.6
Q ss_pred hhHhHHHHHHHHHHHhhhhhhhcccccC-CchhhHHHHHHHHHHHHHHHhcccc-c-------------------cchhH
Q 009816 110 ALLGELDLAFLSIYAGGMFFSGHLGDRL-DLRIFLTVGMVGTGLFTSLYGIGYW-G-------------------NVHSF 168 (524)
Q Consensus 110 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-Grr~~l~~~~~~~~~~~~~~~~a~~-~-------------------~~~~~ 168 (524)
....-..+.+.-......+.++.++|-| ||-+++.++.++..++..+..++.. + +....
T Consensus 73 ~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~ 152 (571)
T KOG1237|consen 73 GGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQL 152 (571)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHH
Confidence 5566677777777888889999999965 8889999998888887655544210 0 00122
Q ss_pred HHHHHHHHHHHHhhhcchhhHHHHHhhccc---cc---cccceehhhhhhhhhHHHHHHHHHHHhh-hcCchhHHHHhHH
Q 009816 169 YYYLVVQMLAGLFQSTGWPSVVAVVGNWFG---KS---KRGLIMGIWNAHTSIGNITGSLVASALL-TYGWGWSFVVPGL 241 (524)
Q Consensus 169 ~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~---~~---~r~~~~~~~~~~~~~G~~ig~~l~~~l~-~~gwr~~f~~~~~ 241 (524)
..++...-+..+|.|..-|...+.-+|-++ ++ .+...+.++....++|..++..+..++. +.+|.+-|.+..+
T Consensus 153 ~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~ 232 (571)
T KOG1237|consen 153 AVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTV 232 (571)
T ss_pred HHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHH
Confidence 356667777888999999999999999998 32 2336788899999999999988888875 6799999998877
Q ss_pred HHHHHH
Q 009816 242 IIAFVG 247 (524)
Q Consensus 242 ~~~~~~ 247 (524)
...+..
T Consensus 233 ~~~lai 238 (571)
T KOG1237|consen 233 LNALAI 238 (571)
T ss_pred HHHHHH
Confidence 665553
No 268
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.85 E-value=0.00043 Score=68.96 Aligned_cols=153 Identities=20% Similarity=0.195 Sum_probs=102.7
Q ss_pred HHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhh----hhHH-HHHHHHHHHHHHHHHHHhhc-chhHH
Q 009816 330 PFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLD----ARAI-TAASFMYCAIPALFFYRSYG-HLSLA 403 (524)
Q Consensus 330 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~----~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~ 403 (524)
..|+++. +|+++.+...+.....+...+ .++.|.++|-+. |||. ++++.++..+....+..... ..+..
T Consensus 13 ~~~l~~~----l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~ 87 (433)
T PF03092_consen 13 YPFLKDD----LGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAA 87 (433)
T ss_pred HHHHHHH----cCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhh
Confidence 3456666 799999988887777665544 678899999873 4444 44555555443443333221 12344
Q ss_pred HHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc-ChhHHHHHHH
Q 009816 404 LNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT-SWTAVFTMLM 482 (524)
Q Consensus 404 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~~~~~~ 482 (524)
...+.+++..++........-..+.|....+ ++.+|...+....+..+|+.++..+.|.+.+. +++..|.+.+
T Consensus 88 ~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~------p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~ 161 (433)
T PF03092_consen 88 IAVVLLFLASFGYAFADVAADALVVELARRE------PESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISA 161 (433)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHHhhcC------CchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHH
Confidence 4455556666666666666667777665433 33378888888899999999999999999888 8888888877
Q ss_pred HHHHHHHHHHH
Q 009816 483 AAALISGLLLT 493 (524)
Q Consensus 483 ~~~~~~~~~~~ 493 (524)
.+.++..+...
T Consensus 162 ~~~~l~~~~~~ 172 (433)
T PF03092_consen 162 ALPLLMLIVAL 172 (433)
T ss_pred HHHHHHHHHHH
Confidence 76665544444
No 269
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=97.80 E-value=0.00078 Score=59.96 Aligned_cols=242 Identities=16% Similarity=0.165 Sum_probs=111.7
Q ss_pred ccccceehhhhhhhhhHHHHHHHH--HH-Hhh---hcCchhHHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCccccccCC
Q 009816 200 SKRGLIMGIWNAHTSIGNITGSLV--AS-ALL---TYGWGWSFVVPGLIIAFVGLIVFLFLPVNPESVGTDTNEEDESLS 273 (524)
Q Consensus 200 ~~r~~~~~~~~~~~~~G~~ig~~l--~~-~l~---~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (524)
++|+....+...++++|.++..+. -. -.. .-.|++.+.+.+++.++-.++..++ +..-+...++ ++++..
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if--Gk~fd~~~~~-~k~~k~- 77 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF--GKNFDIYSPK-EKQEKE- 77 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cccccccCcc-cccccc-
Confidence 577888888888999998886433 22 111 2369999999887776654443333 2211111111 000000
Q ss_pred ccccCCCcccccccchhhhhhhhhhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-CCCCCC----hhhh
Q 009816 274 PKKIGEGVTQPLLRRETKIEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAV-DGKYLS----SEMA 348 (524)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~----~~~~ 348 (524)
+...+.+....+.+|++..|...+......... ...+.+.+...... .+.+.+ ....
T Consensus 78 ----------------~~~~~~~~s~~~~LK~K~tw~w~~~Yg~wLv~~--V~p~t~~~~~~~~~~s~~ni~~~~~~~~~ 139 (267)
T PF07672_consen 78 ----------------NSTLSKKPSYKSILKEKETWKWILIYGIWLVVV--VFPFTPSWFNILIWISPANIKSVVSGGGF 139 (267)
T ss_pred ----------------cccccccchHHHHHccchHHHHHHHHHHHheeE--EEeccchhHhHhhhcCccccccccccccc
Confidence 000112345678899999887766554332211 11111112221100 001110 1111
Q ss_pred ----hhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHH-----HHHHHHHHHHHHhhcch--hHHHHHHHHHHHHhhhh
Q 009816 349 ----GNLSTLFDVGGVLGGILAGHISDRLDARAITAASF-----MYCAIPALFFYRSYGHL--SLALNIALMFITGMFVN 417 (524)
Q Consensus 349 ----~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~ 417 (524)
.....++-.+..+|.+..|.+....-+||..+... ++..+..++.+...... ......+..++.|++.-
T Consensus 140 ~~~~~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~W 219 (267)
T PF07672_consen 140 NWIIPIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLW 219 (267)
T ss_pred chhhHHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHH
Confidence 12222333344455566677766544444333222 22222222211111111 23334455555666554
Q ss_pred hhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhh
Q 009816 418 GPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYI 469 (524)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l 469 (524)
+.++... ..+++.+ ..+|+..|...|+...++++...+.-.+...+
T Consensus 220 giQ~ViL-~lPhEyK-----~~~pk~ig~~Fg~iWGfGY~~yTi~~Ii~S~i 265 (267)
T PF07672_consen 220 GIQGVIL-NLPHEYK-----GYNPKKIGIQFGLIWGFGYIFYTIYDIILSVI 265 (267)
T ss_pred hhhHHHh-cChhhhc-----CCCcceehhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4444332 2233332 33467888888887777776665555544443
No 270
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=97.66 E-value=0.0019 Score=61.77 Aligned_cols=110 Identities=20% Similarity=0.120 Sum_probs=56.3
Q ss_pred HHHHHHHHHHhhcccCCCCCChhhhhhHHHH-HHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHh----hc
Q 009816 324 TFLYWLPFYVSHTAVDGKYLSSEMAGNLSTL-FDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRS----YG 398 (524)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~----~~ 398 (524)
......|-+..+.... ...+....-+.... +++...+|.+...++-++-.|........=...+..+.+.-. ..
T Consensus 261 VTLsiFPg~~~~~~~~-~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~~~r~l~i~v~lR~lfiPlF~~cn~~~~~v~ 339 (406)
T KOG1479|consen 261 VTLSIFPGFCSEVKSS-GLLGDWYALLLVFLSFNVFDLIGSILAALLTWPDPRKLTIPVLLRLLFIPLFLLCNYPPLPVV 339 (406)
T ss_pred eeeEecchhhcccccC-cccchhhHHHHHHHHhHHHHHhhhhhhhcccCCCCceehHHHHHHHHHHHHHHHhccCCCCce
Confidence 3344567776665211 11123333444455 788888887776666544322222222111222222221110 11
Q ss_pred chhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhccc
Q 009816 399 HLSLALNIALMFITGMFVNGPYALITTAVSADLGTH 434 (524)
Q Consensus 399 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 434 (524)
..+.++.+....++|+..|-..+......++.++++
T Consensus 340 ~~~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~ 375 (406)
T KOG1479|consen 340 FESDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPS 375 (406)
T ss_pred ecCchHHHHHHHHHHhccchHhhheehhcCCCCChH
Confidence 245566777788888887777666677776666543
No 271
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.65 E-value=7.9e-05 Score=53.67 Aligned_cols=46 Identities=22% Similarity=0.189 Sum_probs=41.0
Q ss_pred CCCCCCCCCCchhhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHH
Q 009816 98 DGWAPFNGSDGTALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGT 150 (524)
Q Consensus 98 ~g~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~ 150 (524)
.|+++ .|+|.+.++..+...++++++|.++||+++++.++....++
T Consensus 30 ~Gl~~-------~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 30 LGLSP-------SQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred cCCCH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 78877 99999999999999999999999999999998877665543
No 272
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.59 E-value=0.0012 Score=63.31 Aligned_cols=154 Identities=19% Similarity=0.048 Sum_probs=90.5
Q ss_pred CCcHHHHHHHHHHHHHH---HHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHH
Q 009816 306 PGVAPFALCLFFAKLVA---YTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAAS 382 (524)
Q Consensus 306 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~ 382 (524)
|+-|.+.+...+.++.+ +..+.-...|.++. || +...+-+...++.+..++..+.+.|+.||+|-|..+.++
T Consensus 41 ~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~----Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llg 115 (480)
T KOG2563|consen 41 PRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSF----YG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLG 115 (480)
T ss_pred hhHhHHHHHHHHHHhcCcchheeehhHHHHHHHH----hc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHH
Confidence 33455555444444443 22222333455555 67 666677888889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcc---hhHH--HHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhh
Q 009816 383 FMYCAIPALFFYRSYGH---LSLA--LNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSV 457 (524)
Q Consensus 383 ~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~ 457 (524)
..+..++..+=...... +..+ +......+.+...........-....-++ +++|+++..+..+.+.+
T Consensus 116 t~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~--------~~qra~A~~~~v~~n~L 187 (480)
T KOG2563|consen 116 TVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFP--------PDQRAIATVLGVMGNPL 187 (480)
T ss_pred HHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCC--------cchhhhhhhHHHhcchH
Confidence 88888777654332111 2222 23333333333222211111122223344 36667777777777778
Q ss_pred hhhhhhhhhHhhccc
Q 009816 458 GAAIGPLLTGYISAT 472 (524)
Q Consensus 458 g~~i~~~~~g~l~~~ 472 (524)
|.+++..+...+..+
T Consensus 188 Gvavg~llppilV~~ 202 (480)
T KOG2563|consen 188 GVAVGFLLPPILVPS 202 (480)
T ss_pred HHHHHhhccceecCC
Confidence 887777766666544
No 273
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=97.56 E-value=0.009 Score=54.91 Aligned_cols=101 Identities=12% Similarity=0.105 Sum_probs=71.4
Q ss_pred HHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHHHHHhhcccc-
Q 009816 121 SIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVVAVVGNWFGK- 199 (524)
Q Consensus 121 l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~- 199 (524)
+....++++.+.+..++|.|++++++..........--. +.+..++-.-...|++.+..+..--+++++.-..
T Consensus 69 ~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~Nl~------pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~y 142 (390)
T KOG3097|consen 69 LSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAANLE------PRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNY 142 (390)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhcc------hhHHhhccHHHhhccccccccccCcceecHHHHHH
Confidence 344445555558899999999999998887765554444 7889999999999999999988877777666432
Q ss_pred -ccc---------cceehhhhhhhhhHHHHHHHHHHHh
Q 009816 200 -SKR---------GLIMGIWNAHTSIGNITGSLVASAL 227 (524)
Q Consensus 200 -~~r---------~~~~~~~~~~~~~G~~ig~~l~~~l 227 (524)
++| .+..+.+.+.+.-+..+|..+...+
T Consensus 143 a~~~~~q~~~~~~~~ffg~Ffii~~~~qv~gn~issli 180 (390)
T KOG3097|consen 143 ANQRGEQAGDGMKVRFFGEFFIIFQCAQVWGNLISSLI 180 (390)
T ss_pred HHhhhhhccCceeeeehhHHHHHHHHHHHHHHHHHHHH
Confidence 334 4566666666666666665554433
No 274
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.51 E-value=0.023 Score=55.98 Aligned_cols=185 Identities=19% Similarity=0.147 Sum_probs=107.8
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHH--
Q 009816 308 VAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMY-- 385 (524)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~-- 385 (524)
.+.+.+..++..+..-...+..|.++.+. +..+..-.+..-..-.+..++.+...|.+.||..|.+........
T Consensus 4 ~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i----~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn 79 (432)
T PF06963_consen 4 LWRLYLSHFLSTWGDRMWEFAVPLFLISI----FPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQN 79 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH----cCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHH
Confidence 35567777888888878888899999987 555655566666667777888888999999999988765443322
Q ss_pred --HHHHHHHHH--Hhhcch---hHHHH---HHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhh
Q 009816 386 --CAIPALFFY--RSYGHL---SLALN---IALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTG 455 (524)
Q Consensus 386 --~~~~~~~~~--~~~~~~---~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 455 (524)
.++++.++. ...... +.+.. .....+.|.............+.++--... ..++++.....++...-+-
T Consensus 80 ~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi-~~~~~~~La~~NA~mRRID 158 (432)
T PF06963_consen 80 LSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVI-AGGDPGALARMNATMRRID 158 (432)
T ss_pred HHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhh-cCCChhhHHHHHHHHHHHH
Confidence 112222211 111111 01111 111222222111111111111111110000 0223466677777777777
Q ss_pred hhhhhhhhhhhHhhccc-ChhHHHHHHHHHHHHHHHHHHHHHH
Q 009816 456 SVGAAIGPLLTGYISAT-SWTAVFTMLMAAALISGLLLTRLVV 497 (524)
Q Consensus 456 ~~g~~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (524)
.+...++|.+.|.+.+. ++.....+.++..+++..+-+++..
T Consensus 159 L~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~ 201 (432)
T PF06963_consen 159 LFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLLA 201 (432)
T ss_pred HHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999986 8887777777777777665554433
No 275
>PRK03612 spermidine synthase; Provisional
Probab=97.50 E-value=0.017 Score=58.88 Aligned_cols=167 Identities=15% Similarity=0.181 Sum_probs=89.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHH-H-HHHH
Q 009816 312 ALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFM-Y-CAIP 389 (524)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~-~-~~~~ 389 (524)
.+..++..++.........-.+... +|.+....+.+.+++.++..+|+.+++++.++..++....-..+ + ..++
T Consensus 20 ~~~~f~sg~~~L~yEv~~~r~l~~~----~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~e~~i~l~~~~~ 95 (521)
T PRK03612 20 LAAVFVCAACGLVYELLLGTLASYL----LGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVAVELLLALLGGLS 95 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH----hCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 3344444555555555555555555 68888888888898888888999888887644333322111111 1 1111
Q ss_pred HHHHHHhhcc--hhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhH
Q 009816 390 ALFFYRSYGH--LSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTG 467 (524)
Q Consensus 390 ~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g 467 (524)
..++...... ..........++.++..+...|...-....... +..+...|-......+|+++|+.+.+
T Consensus 96 ~~ll~~~~~~~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~---------~~~g~~~g~ly~~ntlGa~~G~l~~~ 166 (521)
T PRK03612 96 ALILYAAFAFQGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRD---------QHLGHNVATVLAADYLGALVGGLAFP 166 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---------cchhhhhhhhHhHHhHHHHHHHHHHH
Confidence 1111111110 111122333444566666665555444432211 12356667777788899999999888
Q ss_pred hhccc--ChhHHHHHHHHHHHHHHHH
Q 009816 468 YISAT--SWTAVFTMLMAAALISGLL 491 (524)
Q Consensus 468 ~l~~~--~~~~~~~~~~~~~~~~~~~ 491 (524)
.+.-. |......+.+.+.++++++
T Consensus 167 ~vLlp~lG~~~t~~~~a~l~~~~a~~ 192 (521)
T PRK03612 167 FLLLPRLGLIRTAALTGSLNLLAALV 192 (521)
T ss_pred HHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 77653 6555555555554444433
No 276
>PRK03612 spermidine synthase; Provisional
Probab=97.40 E-value=0.0034 Score=63.85 Aligned_cols=137 Identities=17% Similarity=0.135 Sum_probs=81.0
Q ss_pred hhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHH--HH-HHHHHHhccccccchhHHHHHHHHHHHHHhhhcch
Q 009816 110 ALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVG--TG-LFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGW 186 (524)
Q Consensus 110 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~--~~-~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~ 186 (524)
.+.+.+.+++++|.++|+.+++++.++.-++.. .+-+.+ .+ ++..+...+..........++..-++.++..|+..
T Consensus 50 ~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~-~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 128 (521)
T PRK03612 50 TQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFV-AVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIGLLIGMEI 128 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 788999999999999999999988744333322 111111 11 11111111100000111223344556778888888
Q ss_pred hhHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhh--hcCchhHHHHhHHHHHHHHH
Q 009816 187 PSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL--TYGWGWSFVVPGLIIAFVGL 248 (524)
Q Consensus 187 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~--~~gwr~~f~~~~~~~~~~~~ 248 (524)
|....+..+.. .++-++..|-.+....+|+++|.++.+++. .+|-....++.+.+.+++++
T Consensus 129 Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~ 191 (521)
T PRK03612 129 PLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAAL 191 (521)
T ss_pred HHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 88777766533 234567788999999999999999888776 45644444444554444443
No 277
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.38 E-value=0.00061 Score=66.75 Aligned_cols=111 Identities=16% Similarity=0.230 Sum_probs=84.4
Q ss_pred hhHHHHHHHHHHHHHHHhcccccc----chhHHHHHHHHHHHHHhhhcchhhHHHHHhhccccc---cccceehhhhhhh
Q 009816 141 IFLTVGMVGTGLFTSLYGIGYWGN----VHSFYYYLVVQMLAGLFQSTGWPSVVAVVGNWFGKS---KRGLIMGIWNAHT 213 (524)
Q Consensus 141 ~~l~~~~~~~~~~~~~~~~a~~~~----~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~ 213 (524)
|+++++.++..+|.++..++.... ..+.+.++++-.+.++|.|+.-|...++++|.++++ +|.+.+.+++.+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 567888888888888855542211 123467889999999999999999999999999865 3566788999999
Q ss_pred hhHHHHHHHHHHHhh-hcCchhHHHHhHHHHHHHHHHHHH
Q 009816 214 SIGNITGSLVASALL-TYGWGWSFVVPGLIIAFVGLIVFL 252 (524)
Q Consensus 214 ~~G~~ig~~l~~~l~-~~gwr~~f~~~~~~~~~~~~~~~~ 252 (524)
++|..+++.+.+++. ++||.+.|.+.++..++. ++.+.
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~-~~~f~ 120 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLA-LIVFL 120 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHH-HHHHH
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHH-HHHHH
Confidence 999999999988888 689999999977655554 44433
No 278
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.36 E-value=0.02 Score=47.59 Aligned_cols=106 Identities=11% Similarity=-0.003 Sum_probs=76.2
Q ss_pred HHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhh
Q 009816 351 LSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSAD 430 (524)
Q Consensus 351 ~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 430 (524)
-.++......+.+++.+.+.+++|.|+.+.++.+...+-..... ..+.+..+....+.|++.+..+.....++.+.
T Consensus 42 slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~----~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~ 117 (156)
T PF05978_consen 42 SLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFF----YPNSYTLYPASALLGFGAALLWTAQGTYLTSY 117 (156)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHH----hhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHc
Confidence 34455566667778889999999999999888877765444433 23556677788889999988888877777765
Q ss_pred hcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHh
Q 009816 431 LGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGY 468 (524)
Q Consensus 431 ~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~ 468 (524)
.. ++.+++..++...+...+.++|..+.-.
T Consensus 118 s~--------~~~~~~~~~ifw~i~~~s~i~G~~~~~~ 147 (156)
T PF05978_consen 118 ST--------EETIGRNTGIFWAIFQSSLIFGNLFLFF 147 (156)
T ss_pred CC--------HHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 44 3566777787777777777777655433
No 279
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=97.35 E-value=3.5e-05 Score=78.44 Aligned_cols=122 Identities=17% Similarity=0.201 Sum_probs=2.3
Q ss_pred CCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhh-----------------------
Q 009816 341 KYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSY----------------------- 397 (524)
Q Consensus 341 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~----------------------- 397 (524)
++++..+.|++.+.+-++.++..++..++.+|.+|-|++..+.++++++.++..+..
T Consensus 33 F~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~ 112 (539)
T PF03137_consen 33 FGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSSISSN 112 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCccccccccccccccccc
Confidence 899999999999999999999999999999999888888888888888776654210
Q ss_pred -c-------------------ch----hHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHh
Q 009816 398 -G-------------------HL----SLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDG 453 (524)
Q Consensus 398 -~-------------------~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 453 (524)
. .. ....+++..++.|++....++.-.+++-+.+++ +..+...|+..+
T Consensus 113 ~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~--------~~splYiGi~~~ 184 (539)
T PF03137_consen 113 LCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSK--------KNSPLYIGILYA 184 (539)
T ss_dssp ---------------------------------------SSS--------------------------------------
T ss_pred cccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeecccccc--------ccCccchhhhhH
Confidence 0 00 012344455667777777777777777777663 556788888888
Q ss_pred hhhhhhhhhhhhhHhhc
Q 009816 454 TGSVGAAIGPLLTGYIS 470 (524)
Q Consensus 454 ~~~~g~~i~~~~~g~l~ 470 (524)
...+|-++|-.+++...
T Consensus 185 ~~~lGPa~Gf~lg~~~L 201 (539)
T PF03137_consen 185 MSILGPALGFLLGSFCL 201 (539)
T ss_dssp -----------------
T ss_pred HhhccHHHHHHHHHHHH
Confidence 88887777766666554
No 280
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=97.13 E-value=0.064 Score=50.38 Aligned_cols=151 Identities=24% Similarity=0.364 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCCh--hhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhc
Q 009816 321 VAYTFLYWLPFYVSHTAVDGKYLSS--EMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYG 398 (524)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (524)
.........+.+..+. +.+. ...++......+...++.++.|.+.||.|||+.+..+......+.+......
T Consensus 17 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~- 90 (338)
T COG0477 17 DLGLLSPALPLLLSTL-----SLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAP- 90 (338)
T ss_pred hcchHHHHHHHHHHHc-----CCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCc-
Confidence 3334445566666653 4444 4678888888888888889999999999998776666554333322222211
Q ss_pred chhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHh-hhhhhhhhhhhhhHhhccc---Ch
Q 009816 399 HLSLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDG-TGSVGAAIGPLLTGYISAT---SW 474 (524)
Q Consensus 399 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~-~~~~g~~i~~~~~g~l~~~---~~ 474 (524)
....+...+.....|++.+...+.......+..+. + +.++...+.... ...++..++|.+.+.+... +|
T Consensus 91 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (338)
T COG0477 91 NVGLALLLILRLLQGLGGGGLLPVASALLSEWFPE--A-----TERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGW 163 (338)
T ss_pred cchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCc--h-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 12344445555556777777777777777777653 0 356777777777 5677888888776666554 66
Q ss_pred hHHHHHHHHH
Q 009816 475 TAVFTMLMAA 484 (524)
Q Consensus 475 ~~~~~~~~~~ 484 (524)
+..+......
T Consensus 164 ~~~~~~~~~~ 173 (338)
T COG0477 164 RAAFLLAALL 173 (338)
T ss_pred HHHHHHHHHH
Confidence 6644444333
No 281
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=96.97 E-value=0.039 Score=53.53 Aligned_cols=157 Identities=15% Similarity=0.120 Sum_probs=99.7
Q ss_pred HHHHHHHHhhcccCCCCCChhhhhh-HHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHH
Q 009816 326 LYWLPFYVSHTAVDGKYLSSEMAGN-LSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLAL 404 (524)
Q Consensus 326 ~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (524)
..++..|+.+. .+|++..+... ++-...-..+..-+....+.|.++.|..+++..+...+.-.++.+ .++...
T Consensus 23 EPfl~~yL~~~---~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~---~~sv~~ 96 (412)
T PF01770_consen 23 EPFLTPYLTGP---DKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLF---GTSVLA 96 (412)
T ss_pred CccchHHHcCC---ccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH---HCcHHH
Confidence 35666666653 16888888764 333334445556677789999999999888887776666555543 356666
Q ss_pred HHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc---ChhHHHHHH
Q 009816 405 NIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT---SWTAVFTML 481 (524)
Q Consensus 405 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~---~~~~~~~~~ 481 (524)
.-+.-++.|...+. -...++++-..+++ +..-++.+...+..-+|..++..++-.+... ++....++.
T Consensus 97 mq~~q~~yg~~~a~-evay~sYiys~v~~--------~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~is 167 (412)
T PF01770_consen 97 MQLMQFFYGLATAA-EVAYYSYIYSVVDK--------EHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYIS 167 (412)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHheeecCH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 77777777776554 33344555555543 4455677777777777777777666655553 666666666
Q ss_pred HHHHHHHHHHHHHHHH
Q 009816 482 MAAALISGLLLTRLVV 497 (524)
Q Consensus 482 ~~~~~~~~~~~~~~~~ 497 (524)
.+...++.++.+++.+
T Consensus 168 l~~~~~a~~~~~fLP~ 183 (412)
T PF01770_consen 168 LASVSLALLIALFLPM 183 (412)
T ss_pred HHHHHHHHHHHHHcCC
Confidence 6655555555554433
No 282
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.95 E-value=0.12 Score=51.56 Aligned_cols=119 Identities=12% Similarity=-0.023 Sum_probs=69.7
Q ss_pred ChhhhhhHHHHHHHHHHhh-hHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHh-hcchh--------------------
Q 009816 344 SSEMAGNLSTLFDVGGVLG-GILAGHISDRLDARAITAASFMYCAIPALFFYRS-YGHLS-------------------- 401 (524)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~-~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------------------- 401 (524)
+.+...++-+..-+...+. .++.+++++|++|++..............++... .+..+
T Consensus 41 gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~ 120 (472)
T TIGR00769 41 GAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFM 120 (472)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhH
Confidence 3455666655554444444 7888999999999998766554444433332221 11111
Q ss_pred -------HHHHHHHHHHHHhhhhhhhH-HHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhc
Q 009816 402 -------LALNIALMFITGMFVNGPYA-LITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYIS 470 (524)
Q Consensus 402 -------~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~ 470 (524)
.|......+...+......+ .......+... .++..+-.++....+++|..+++.+..++.
T Consensus 121 ~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t--------~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 121 GFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITT--------IDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12222223333333333444 33444444443 356678999999999999999999988876
No 283
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.93 E-value=0.012 Score=42.82 Aligned_cols=71 Identities=18% Similarity=0.272 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHH
Q 009816 320 LVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYR 395 (524)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~ 395 (524)
..-+.++..+|...++ .++|..+.+++.+.+.++.++|.+...++.++.++++.+..+.+...+..+.+..
T Consensus 6 igRFayTplLP~M~~~-----~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~ 76 (85)
T PF06779_consen 6 IGRFAYTPLLPLMQAD-----GGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMAL 76 (85)
T ss_pred hHHHHHHhHhHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 4556677789988888 4999999999999999999999999999999877788887777777766666554
No 284
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=96.77 E-value=0.011 Score=57.18 Aligned_cols=115 Identities=12% Similarity=0.118 Sum_probs=82.4
Q ss_pred hhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhH
Q 009816 110 ALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSV 189 (524)
Q Consensus 110 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~ 189 (524)
.+..+....|.+|-.++.--...+ |+ |++.+.+.+-..-..++..-+...-.++.|..++.-+..|+..|..++-.
T Consensus 281 ~~Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNt 356 (402)
T PF02487_consen 281 DQYRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNT 356 (402)
T ss_pred HHHHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHH
Confidence 778888888888877764433222 33 44444333322222221111111113788999999999999999999999
Q ss_pred HHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhh
Q 009816 190 VAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL 228 (524)
Q Consensus 190 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~ 228 (524)
...+.+-.++++|..+++....+-++|.+++.+++-.+.
T Consensus 357 F~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 357 FYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999987765
No 285
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=96.50 E-value=0.0084 Score=58.72 Aligned_cols=112 Identities=12% Similarity=0.080 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcch------hHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHH
Q 009816 377 AITAASFMYCAIPALFFYRSYGHL------SLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAI 450 (524)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 450 (524)
|++.++.++..++.+++....... ......+.+.+++++.++.-+...+...+.+++++ ++.+.+....
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~-----~~~~~~~F~~ 76 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDD-----DSRRDSFFNW 76 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTT-----TTHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccc-----hhhhhhhHHH
Confidence 455666666666666643321111 23456777888899999999999999999887643 3566778888
Q ss_pred HHhhhhhhhhhhhhhhHhhccc-ChhHHHHHHHHHHHHHHHHHH
Q 009816 451 IDGTGSVGAAIGPLLTGYISAT-SWTAVFTMLMAAALISGLLLT 493 (524)
Q Consensus 451 ~~~~~~~g~~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~ 493 (524)
.....++|..+++.+.+++.+. +|...|.+.++..+++.+...
T Consensus 77 fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~ 120 (372)
T PF00854_consen 77 FYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFL 120 (372)
T ss_dssp HHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHH
Confidence 8899999999999999999977 999999999888877666544
No 286
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.28 E-value=0.011 Score=61.15 Aligned_cols=160 Identities=16% Similarity=0.192 Sum_probs=110.6
Q ss_pred HHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhh------
Q 009816 324 TFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSY------ 397 (524)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~------ 397 (524)
++....-.-+++. ++++..+.|++...+-++..+..+...++..|.+|-+++..+.++++++.++..+..
T Consensus 114 ~y~~s~IttiErR----F~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y 189 (735)
T KOG3626|consen 114 GYFNSVITTIERR----FKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPY 189 (735)
T ss_pred hhhhhhhhhhhhh----cCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcc
Confidence 3333344445555 899999999999999999999999999999999999998888888888777664310
Q ss_pred -------------c---------------------------ch---hHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhccc
Q 009816 398 -------------G---------------------------HL---SLALNIALMFITGMFVNGPYALITTAVSADLGTH 434 (524)
Q Consensus 398 -------------~---------------------------~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 434 (524)
+ .. .+..+++..++.|++....++.-.+++-+.+.
T Consensus 190 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk-- 267 (735)
T KOG3626|consen 190 EYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVK-- 267 (735)
T ss_pred hhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCcccccccc--
Confidence 0 00 11234445667777777777777777666655
Q ss_pred ccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc--------------------ChhHHHHHHHHHHHHHHHHHHH
Q 009816 435 SSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT--------------------SWTAVFTMLMAAALISGLLLTR 494 (524)
Q Consensus 435 ~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~--------------------~~~~~~~~~~~~~~~~~~~~~~ 494 (524)
.+......|+..++..+|=++|-.+++..... .|...|++.+.+.++..+.++.
T Consensus 268 ------~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~ 341 (735)
T KOG3626|consen 268 ------KKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFF 341 (735)
T ss_pred ------ccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 35567888888888888777777776665421 2445566666666666655554
Q ss_pred H
Q 009816 495 L 495 (524)
Q Consensus 495 ~ 495 (524)
+
T Consensus 342 f 342 (735)
T KOG3626|consen 342 F 342 (735)
T ss_pred C
Confidence 4
No 287
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=95.98 E-value=0.037 Score=53.59 Aligned_cols=144 Identities=15% Similarity=0.077 Sum_probs=90.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhh----hhhhHHHHHHHHHHHHH
Q 009816 314 CLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDR----LDARAITAASFMYCAIP 389 (524)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~~~~~~~~~~~~~~~~~ 389 (524)
..+...+....-..+++.|++.. |.+....+.+....-+.+++.+++.|..+|| +||||..+....+....
T Consensus 40 ia~Gvqf~wA~elsy~tPyl~~l-----Gvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~ 114 (498)
T KOG0637|consen 40 IAAGVQFGWALELSYLTPYLQSL-----GVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAV 114 (498)
T ss_pred HHHHHHHHHHHHhccccHHHHHc-----CCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHH
Confidence 33444445555668899999985 9999999998888888899999999999996 48888776655544433
Q ss_pred HHHHH-Hh-------hcch-------hHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhh
Q 009816 390 ALFFY-RS-------YGHL-------SLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGT 454 (524)
Q Consensus 390 ~~~~~-~~-------~~~~-------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 454 (524)
.+.+. .. .... .....++..-+.-+.......+.-+...+...++++ +. ++++....+
T Consensus 115 ~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~-----~~--~Ans~f~~f 187 (498)
T KOG0637|consen 115 SLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAK-----KT--RANSVFSFF 187 (498)
T ss_pred HHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhh-----hh--ccchhHHHH
Confidence 33322 11 0111 111222233334445556667777777776554321 22 167777777
Q ss_pred hhhhhhhhhhhhHhh
Q 009816 455 GSVGAAIGPLLTGYI 469 (524)
Q Consensus 455 ~~~g~~i~~~~~g~l 469 (524)
..+|+.+|-.+.++.
T Consensus 188 ~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 188 MAVGNVLGYALGSYL 202 (498)
T ss_pred HHhcceeeeeccccc
Confidence 788888777666543
No 288
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=95.74 E-value=0.0033 Score=59.63 Aligned_cols=85 Identities=19% Similarity=0.103 Sum_probs=3.0
Q ss_pred hHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHH--HHHHHHHHhhc--------chhHHHHHHHHHHHHhhhhhh
Q 009816 350 NLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCA--IPALFFYRSYG--------HLSLALNIALMFITGMFVNGP 419 (524)
Q Consensus 350 ~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~--~~~~~~~~~~~--------~~~~~~~~~~~~~~g~~~~~~ 419 (524)
.++..++++..+|+.+.++..-+..+++.+.+..+.=. +..+++.-..+ -.+.++.++..+++|+..|-.
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl 265 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYL 265 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchh
Confidence 35667899999999988774322113333332222211 11111110110 124455666777888887777
Q ss_pred hHHHHHHHHhhhccc
Q 009816 420 YALITTAVSADLGTH 434 (524)
Q Consensus 420 ~~~~~~~~~~~~~~~ 434 (524)
.+....+.++.++++
T Consensus 266 ~tl~m~~~p~~v~~~ 280 (309)
T PF01733_consen 266 STLAMMYAPKSVSPE 280 (309)
T ss_dssp -HHHH----------
T ss_pred hhceeeeCCCcCCHH
Confidence 777777777766643
No 289
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.64 E-value=0.17 Score=50.14 Aligned_cols=108 Identities=11% Similarity=0.098 Sum_probs=79.5
Q ss_pred HHHHHHhhhhhhhccc---ccCCchhhHHHHHHHHHHHHHHHhcccccc-------------chhHHHHHHHHHHHHHhh
Q 009816 119 FLSIYAGGMFFSGHLG---DRLDLRIFLTVGMVGTGLFTSLYGIGYWGN-------------VHSFYYYLVVQMLAGLFQ 182 (524)
Q Consensus 119 ~~l~~~~~~~~~G~l~---Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~-------------~~~~~~~~~~r~l~G~~~ 182 (524)
..++..+++.+.+.+. +++||++.+.++.++..++.++.-+..... .+++...++.-++.|++.
T Consensus 288 ~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D 367 (461)
T KOG3098|consen 288 IGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGD 367 (461)
T ss_pred HhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHH
Confidence 3334444455555555 568999999999998888888776642211 125678888899999999
Q ss_pred hcchhhHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHh
Q 009816 183 STGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASAL 227 (524)
Q Consensus 183 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l 227 (524)
+......+.++.+.+ +++|..+.++.-.-.+++..++-......
T Consensus 368 ~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~~ 411 (461)
T KOG3098|consen 368 ACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPYL 411 (461)
T ss_pred HHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 999999999999999 57888888888887777777665544433
No 290
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=95.16 E-value=0.4 Score=49.34 Aligned_cols=173 Identities=13% Similarity=0.107 Sum_probs=116.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhh-hhhHHHHHHHHHHHHHHHHH
Q 009816 315 LFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRL-DARAITAASFMYCAIPALFF 393 (524)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~~~~~~~~~~~~~~~~ 393 (524)
-.+...++++....+..|+... ++.+...+.-....+........+++++++|.+ ||-+++.++.++..++...+
T Consensus 46 e~~e~~a~~g~~~nlv~ylt~~----~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~l 121 (571)
T KOG1237|consen 46 EVLERLAFFGLVSNLVTYLTLE----LHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGL 121 (571)
T ss_pred HHHHHHhHhcchhHHHHHHHHH----hccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 3445556666677788888887 788777777777777777777788999999976 77777777766665554433
Q ss_pred HHhh------c-------c------hh---HHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHH
Q 009816 394 YRSY------G-------H------LS---LALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAII 451 (524)
Q Consensus 394 ~~~~------~-------~------~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 451 (524)
.... + . .+ ...+...+.+..++.++.-+.....-.+.+++..+ ...+....-+...
T Consensus 122 t~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~--~~~~~~~~fFnW~ 199 (571)
T KOG1237|consen 122 TLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDP--VEVKGIPSFFNWF 199 (571)
T ss_pred HHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCc--chhhCcccchhHH
Confidence 2210 0 0 01 12344455566667788888888888887773221 1123334566677
Q ss_pred HhhhhhhhhhhhhhhHhhccc-ChhHHHHHHHHHHHHHHHHHH
Q 009816 452 DGTGSVGAAIGPLLTGYISAT-SWTAVFTMLMAAALISGLLLT 493 (524)
Q Consensus 452 ~~~~~~g~~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~ 493 (524)
....+.|..++-.+.-++.+. +|...|.+..++..++.++.+
T Consensus 200 yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~ 242 (571)
T KOG1237|consen 200 YFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFL 242 (571)
T ss_pred HHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHH
Confidence 777788888888888888777 898888888877776665544
No 291
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=94.88 E-value=3.2 Score=41.99 Aligned_cols=31 Identities=16% Similarity=0.225 Sum_probs=26.5
Q ss_pred ccchhHHHHHHHhhhhhhhhhhhhhhHhhcc
Q 009816 441 SRALATVTAIIDGTGSVGAAIGPLLTGYISA 471 (524)
Q Consensus 441 ~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~ 471 (524)
.++..+..++.....++|.++++.+..++.+
T Consensus 175 ~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 175 VEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566789999999999999999988888777
No 292
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=94.83 E-value=0.3 Score=46.18 Aligned_cols=117 Identities=10% Similarity=-0.039 Sum_probs=60.8
Q ss_pred HHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhcccc--ccc-----hhHHHHHHHHHHHHHhhhc--chhhHH--
Q 009816 122 IYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYW--GNV-----HSFYYYLVVQMLAGLFQST--GWPSVV-- 190 (524)
Q Consensus 122 ~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~--~~~-----~~~~~~~~~r~l~G~~~~~--~~~~~~-- 190 (524)
...+..++.|...|+..|+|++...+.+.-++..+++.... ... .++..+..+-++.-...+. ....+.
T Consensus 75 s~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i 154 (503)
T KOG2601|consen 75 SQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIVAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTI 154 (503)
T ss_pred HHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHHHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheE
Confidence 45567788889999999999988777664443333332100 001 2444444444433222111 111111
Q ss_pred HHHhhcc----ccc---cccceehhhhhhhhhHHHHHHHHHHHhhhc-CchhHHHH
Q 009816 191 AVVGNWF----GKS---KRGLIMGIWNAHTSIGNITGSLVASALLTY-GWGWSFVV 238 (524)
Q Consensus 191 ~~i~~~~----~~~---~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~-gwr~~f~~ 238 (524)
.+-.||. ..+ ...++.+..-..-..-.+++|.+.|.+.++ +-|..-..
T Consensus 155 ~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn~Lapv~tg~Iitfvsl~~~~g~ 210 (503)
T KOG2601|consen 155 LIERDWVVVMSEGESPSVLTNMNATIRGIDQSTNLLAPVITGLIITFVSLRASAGT 210 (503)
T ss_pred EecccEEEEecCCCCHHHHhhcchhhhhhhhhhhchhhhhhcccceeechhhhhhh
Confidence 1223443 122 233334555556666778889988888754 55553333
No 293
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=93.11 E-value=1.6 Score=43.62 Aligned_cols=114 Identities=11% Similarity=-0.046 Sum_probs=76.9
Q ss_pred hHHHHHHHHHHHhhhhhhhcccccCCch--hhHHHH--HHHHHHHHHHHhcccc---c-cchhHHHHHHHHHHHHHhhhc
Q 009816 113 GELDLAFLSIYAGGMFFSGHLGDRLDLR--IFLTVG--MVGTGLFTSLYGIGYW---G-NVHSFYYYLVVQMLAGLFQST 184 (524)
Q Consensus 113 g~~~s~~~l~~~~~~~~~G~l~Dr~Grr--~~l~~~--~~~~~~~~~~~~~a~~---~-~~~~~~~~~~~r~l~G~~~~~ 184 (524)
-.....|.++=.+|..+..+..= -++| ++.+.+ =+++.-..++|..-.. + ..++-+..++..++.|+..|-
T Consensus 310 ~i~~~~fNvgD~vGR~~~~~~~~-p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnGy 388 (437)
T TIGR00939 310 IICFLLFNLFDWLGRSLTSKFMW-PDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNGY 388 (437)
T ss_pred HHHHHHHHHHHHHHhhhhheeEe-eCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhhH
Confidence 45677788888888876654311 1222 333222 2223333334432100 0 125677788889999999999
Q ss_pred chhhHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHh
Q 009816 185 GWPSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASAL 227 (524)
Q Consensus 185 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l 227 (524)
....+..+..+..+++||..+-.+...+..+|..+|..++..+
T Consensus 389 ~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~ 431 (437)
T TIGR00939 389 LGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLF 431 (437)
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998888876554
No 294
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=92.87 E-value=0.2 Score=45.06 Aligned_cols=146 Identities=11% Similarity=0.046 Sum_probs=77.3
Q ss_pred CCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhh
Q 009816 341 KYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPY 420 (524)
Q Consensus 341 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 420 (524)
+|+...+.|.++.......++...+.|-++||.|||+.-+.-++...++++.= .++.....++.-.+-|+..+..+
T Consensus 67 YgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCiTK----hSpqYkVLmVGR~LGGiaTsLLF 142 (454)
T KOG4332|consen 67 YGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCITK----HSPQYKVLMVGRVLGGIATSLLF 142 (454)
T ss_pred cCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHHhh----cCCceEEEeehhhhhhHHHHHHH
Confidence 68888898888777666667777788999999999986544333333333221 12333344555566677666666
Q ss_pred HHHHHHHHhhhcccccCCCCccchhHHHHHHH-hhhhhhhhhhhhhhHhhccc---ChhHHHHHHHHHHHHHHHHH
Q 009816 421 ALITTAVSADLGTHSSLKGNSRALATVTAIID-GTGSVGAAIGPLLTGYISAT---SWTAVFTMLMAAALISGLLL 492 (524)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~-~~~~~g~~i~~~~~g~l~~~---~~~~~~~~~~~~~~~~~~~~ 492 (524)
+..-++...+-.++..++ .+-.....+=.. ..+.+-.++....+..+.|. |.-.+|...+....++..+.
T Consensus 143 SaFEsWliaEHnekr~Fe--qqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigmAvi 216 (454)
T KOG4332|consen 143 SAFESWLIAEHNEKRGFE--QQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGMAVI 216 (454)
T ss_pred HHHHHHHHHHhhhccCCh--HhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHH
Confidence 666555444322111111 111111111111 12233344444444455554 55556665555555554443
No 295
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=92.58 E-value=3.5 Score=39.34 Aligned_cols=178 Identities=13% Similarity=0.112 Sum_probs=88.8
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHH-
Q 009816 306 PGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFM- 384 (524)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~- 384 (524)
+....+.++.++..+.-=...+....|+... .|-|...++..-.+-+....+...+.|...|+..|.|.+.....
T Consensus 27 ~~~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L----~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~l 102 (503)
T KOG2601|consen 27 STVIFLYLGYFLTTWGDRMWEFSVSLFMILL----GGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLL 102 (503)
T ss_pred ceeehhhHHHHHhHhhHhHHHHHHHHHHHHH----cCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhh
Confidence 3344455666666666555556677777776 56566666555555566666667777889999999886543332
Q ss_pred ----HHHHHHHHHHHhhcc----hhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccc-----cCCCCccchhHHHHHH
Q 009816 385 ----YCAIPALFFYRSYGH----LSLALNIALMFITGMFVNGPYALITTAVSADLGTHS-----SLKGNSRALATVTAII 451 (524)
Q Consensus 385 ----~~~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~g~~~g~~ 451 (524)
.+..+.+++..+... .+.++...++.+.-.. +... ...+......-+++ ....++.......+..
T Consensus 103 qNlSv~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i-~aI~-~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnati 180 (503)
T KOG2601|consen 103 QNLSVIVAGGLVITLLVHKDLKSATSPVFTVCLVLANLI-AAIA-VLASLAGTILIERDWVVVMSEGESPSVLTNMNATI 180 (503)
T ss_pred ccHHHHHHHHHHhhheeecchhcccccHHHHHHHHHHHH-HHHH-HHHHhhheEEecccEEEEecCCCCHHHHhhcchhh
Confidence 122222222222111 1223333333332211 1111 11111111111100 0011112222333444
Q ss_pred HhhhhhhhhhhhhhhHhhccc-ChhHHHHHHHHHHHHHH
Q 009816 452 DGTGSVGAAIGPLLTGYISAT-SWTAVFTMLMAAALISG 489 (524)
Q Consensus 452 ~~~~~~g~~i~~~~~g~l~~~-~~~~~~~~~~~~~~~~~ 489 (524)
...-.....+.|.+.|.+... +.+......++-.++..
T Consensus 181 r~iDq~tn~Lapv~tg~Iitfvsl~~~~g~f~~w~~vsm 219 (503)
T KOG2601|consen 181 RGIDQSTNLLAPVITGLIITFVSLRASAGTFAAWALVSM 219 (503)
T ss_pred hhhhhhhhchhhhhhcccceeechhhhhhhhHHHHHHHH
Confidence 455566778899999988877 55655555555444443
No 296
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=91.19 E-value=16 Score=35.71 Aligned_cols=26 Identities=0% Similarity=-0.000 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHhhhhhhhHHHHHHH
Q 009816 402 LALNIALMFITGMFVNGPYALITTAV 427 (524)
Q Consensus 402 ~~~~~~~~~~~g~~~~~~~~~~~~~~ 427 (524)
....++...+.+++.+..++..+...
T Consensus 117 f~vt~~~vv~~~~a~a~~qgs~~G~a 142 (406)
T KOG1479|consen 117 FLVTLIIVVLLNLANAVVQGSLYGLA 142 (406)
T ss_pred HHHHHHHHHHHhhhhhhhccchhhhh
Confidence 34444455556666555555544443
No 297
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=90.86 E-value=15 Score=34.86 Aligned_cols=143 Identities=13% Similarity=0.082 Sum_probs=71.5
Q ss_pred CCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHH----HHHHHH-HHHHHHHHHH-hhcchhHHHHHHHHHHHHh
Q 009816 341 KYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAIT----AASFMY-CAIPALFFYR-SYGHLSLALNIALMFITGM 414 (524)
Q Consensus 341 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~----~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~ 414 (524)
.|-+..+.+.+.+.+-.+.-+|+.+.-++.|.--..+.+ .++.+. +....+.+.+ .....+.+.......++|.
T Consensus 38 lG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~ 117 (508)
T COG4262 38 LGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGV 117 (508)
T ss_pred cCCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 466777777777776666666776666665543222211 111111 1111111111 1222355666777788888
Q ss_pred hhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc--ChhHHHHHHHHHHHHHHHHH
Q 009816 415 FVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT--SWTAVFTMLMAAALISGLLL 492 (524)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~--~~~~~~~~~~~~~~~~~~~~ 492 (524)
..+.-.+..+.+....... . ....+.....-++|...+..+..++.-. |.--.-...+.+-+++++..
T Consensus 118 LVG~EiPL~mrml~~r~a~---------~-k~~~s~vl~~DYLGal~~gLl~p~lllP~LGl~rta~laG~~Nl~aAvv~ 187 (508)
T COG4262 118 LVGAEIPLLMRMLQRRQAK---------A-KDLGSRVLTLDYLGALAGGLLWPFLLLPRLGLVRTAALAGLCNLAAAVVT 187 (508)
T ss_pred HHhcchHHHHHHHHHHHHH---------H-HhhhhhhhhhHhhhhhhHHHHHHHHHhhhhccHHHHHHHHHHHHHHHHHH
Confidence 8888878777776652221 1 1122222333667777776666655433 33333333344434433333
Q ss_pred H
Q 009816 493 T 493 (524)
Q Consensus 493 ~ 493 (524)
+
T Consensus 188 ~ 188 (508)
T COG4262 188 L 188 (508)
T ss_pred H
Confidence 3
No 298
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=90.19 E-value=22 Score=35.62 Aligned_cols=123 Identities=10% Similarity=0.025 Sum_probs=69.4
Q ss_pred CChhhhhhHHHHHHH-HHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHh-hc-------c-----------h--
Q 009816 343 LSSEMAGNLSTLFDV-GGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRS-YG-------H-----------L-- 400 (524)
Q Consensus 343 ~~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~-~~-------~-----------~-- 400 (524)
.+++...++=...-+ ++++..++..++.++..+.+.............+++... .| . +
T Consensus 58 ~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~ 137 (509)
T COG3202 58 QGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMF 137 (509)
T ss_pred CcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCcc
Confidence 345555555444333 556677888899999988887655444443333332211 10 0 0
Q ss_pred --------hHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhccc
Q 009816 401 --------SLALNIALMFITGMFVNGPYALITTAVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISAT 472 (524)
Q Consensus 401 --------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 472 (524)
+.|.........-+-.....+......+++..+ .++..+-.++.+...+++..++..+..++...
T Consensus 138 l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt-------~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~ 210 (509)
T COG3202 138 LKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITT-------IEEAKRFYPLFGLGANISLLLSGEVTSWLSKH 210 (509)
T ss_pred ceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-------HHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 012222222222232333344344444444443 25567889999999999999999998888774
No 299
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=88.51 E-value=9 Score=36.22 Aligned_cols=85 Identities=13% Similarity=0.169 Sum_probs=56.2
Q ss_pred hhHhHHHHHHHHHHHhhhhhhhcccccCCch-hh---HHHHHHHH-HHHHHHHhccccccchhHHHHHHHHHHHHHhhhc
Q 009816 110 ALLGELDLAFLSIYAGGMFFSGHLGDRLDLR-IF---LTVGMVGT-GLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQST 184 (524)
Q Consensus 110 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr-~~---l~~~~~~~-~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~ 184 (524)
-|.+.+.+.|...+++|+...-++.|---.- .+ +++|++.- ....+-..|+. .+.++-+.+++.-++.|.-.|.
T Consensus 43 lq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~-~~~~~~~Vly~lt~vIG~LVG~ 121 (508)
T COG4262 43 LQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFAL-ESAPSRLVLYALTAVIGVLVGA 121 (508)
T ss_pred eehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHh-ccchHHHHHHHHHHHHHHHHhc
Confidence 7789999999999999999998887753222 22 12222221 11111112221 1124677888889999999999
Q ss_pred chhhHHHHHhh
Q 009816 185 GWPSVVAVVGN 195 (524)
Q Consensus 185 ~~~~~~~~i~~ 195 (524)
..|..+.++..
T Consensus 122 EiPL~mrml~~ 132 (508)
T COG4262 122 EIPLLMRMLQR 132 (508)
T ss_pred chHHHHHHHHH
Confidence 99999998877
No 300
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=87.55 E-value=10 Score=36.60 Aligned_cols=66 Identities=14% Similarity=0.076 Sum_probs=36.9
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHh-----hhhhhHHHHH
Q 009816 308 VAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISD-----RLDARAITAA 381 (524)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-----r~~~~~~~~~ 381 (524)
+..+...+....... +....+|..++. .|.|-+..+.....+.=-. --++...++| |+||||..++
T Consensus 33 illLl~LYllQGiP~-GL~~~iP~lL~a-----k~vSyt~~a~fS~ay~P~s--LKllWaPiVDs~y~k~~GrrksWvv 103 (510)
T KOG3574|consen 33 ILLLLFLYLLQGIPL-GLIGAIPLLLQA-----KGVSYTSQAIFSFAYWPFS--LKLLWAPIVDSVYSKRFGRRKSWVV 103 (510)
T ss_pred HHHHHHHHHHcCCch-hHhhhhHHHhcC-----CCcchhhhhhhhhhhhHHH--HHHHHHhhhHHHHHHhhccccceee
Confidence 444444444444443 444488988886 4777766665443332211 1344555666 9999986544
No 301
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=86.30 E-value=2.5 Score=31.82 Aligned_cols=32 Identities=6% Similarity=-0.023 Sum_probs=25.8
Q ss_pred ccchhHHHHHHHhhhhhhhhhhhhhhHhhccc
Q 009816 441 SRALATVTAIIDGTGSVGAAIGPLLTGYISAT 472 (524)
Q Consensus 441 ~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~ 472 (524)
.+.++.+.++-...-.+++++-....||+.|+
T Consensus 37 ~s~k~~~~a~klssefIsGilVGa~iG~llD~ 68 (116)
T COG5336 37 ESIKGYAQAFKLSSEFISGILVGAGIGWLLDK 68 (116)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35567777777777788888888999999998
No 302
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=81.61 E-value=22 Score=32.31 Aligned_cols=107 Identities=19% Similarity=0.162 Sum_probs=56.4
Q ss_pred HhHHHHHHHHHHHhhhhhhhccccc-CCchhhHH----HHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcch
Q 009816 112 LGELDLAFLSIYAGGMFFSGHLGDR-LDLRIFLT----VGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGW 186 (524)
Q Consensus 112 ~g~~~s~~~l~~~~~~~~~G~l~Dr-~Grr~~l~----~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~ 186 (524)
.....-.+..|+.+|....|++... +.||+.+. .+++++.+..++...-...+..++..+++.-++.|++.=...
T Consensus 143 ~~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ 222 (267)
T PF07672_consen 143 IPIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQ 222 (267)
T ss_pred hHHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhh
Confidence 3444556777777777888887764 45665433 334444444444211111111246678888888887653333
Q ss_pred hhHHHHHhhccccccccceehhhhhhhhhHHHH
Q 009816 187 PSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNIT 219 (524)
Q Consensus 187 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i 219 (524)
+ ..-.+.+-++..++-+.--.++..+++|.++
T Consensus 223 ~-ViL~lPhEyK~~~pk~ig~~Fg~iWGfGY~~ 254 (267)
T PF07672_consen 223 G-VILNLPHEYKGYNPKKIGIQFGLIWGFGYIF 254 (267)
T ss_pred H-HHhcChhhhcCCCcceehhHHHHHHHHHHHH
Confidence 3 3344555554444444444444555555443
No 303
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=78.88 E-value=0.75 Score=43.62 Aligned_cols=113 Identities=15% Similarity=0.029 Sum_probs=3.8
Q ss_pred HHHHHHHHHHhhhhhhhccccc-CCchhhHHHH--HHHHHHHHHHHhcccc-----ccchhHHHHHHHHHHHHHhhhcch
Q 009816 115 LDLAFLSIYAGGMFFSGHLGDR-LDLRIFLTVG--MVGTGLFTSLYGIGYW-----GNVHSFYYYLVVQMLAGLFQSTGW 186 (524)
Q Consensus 115 ~~s~~~l~~~~~~~~~G~l~Dr-~Grr~~l~~~--~~~~~~~~~~~~~a~~-----~~~~~~~~~~~~r~l~G~~~~~~~ 186 (524)
....|.++=.+|..+.++.-=+ -.+|++.+.+ =+++.-..++|..-.. ...++-+..++..++.|+..|-..
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl~ 266 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYLS 266 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchhh
Confidence 4567888888888877764211 1244444332 1222222222211100 012566778888999999999999
Q ss_pred hhHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHh
Q 009816 187 PSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASAL 227 (524)
Q Consensus 187 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l 227 (524)
.....+..+..++++|..+-.+......+|..+|..++..+
T Consensus 267 tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~~ 307 (309)
T PF01733_consen 267 TLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFLL 307 (309)
T ss_dssp HHHH-------------------------------------
T ss_pred hceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999998888888888888888776543
No 304
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=78.12 E-value=7.1 Score=36.32 Aligned_cols=109 Identities=13% Similarity=0.074 Sum_probs=74.9
Q ss_pred hhHhHHHHHHHHHHHhhhhhhhcccccCCchhh-----HHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhc
Q 009816 110 ALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIF-----LTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQST 184 (524)
Q Consensus 110 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~-----l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~ 184 (524)
.|.-|....|.+|..+..--.-. +--+.. +..-.+++.+...+..+. ++++..++.-+.-|+-.|.
T Consensus 288 sqYRwyqvlYQlGVFiSRSS~~~----~~~p~l~~LailQ~vNl~ff~~~a~~~ft-----psi~ivf~lI~~EGLlGGa 358 (409)
T KOG3880|consen 288 SQYRWYQVLYQLGVFISRSSINL----FTMPYLWLLAILQFVNLLFFLLQAWYWFT-----PSIWIVFALILFEGLLGGA 358 (409)
T ss_pred hcchhhheeeeeeEEEEeccceE----EechHHHHHHHHHHHHHHHHHHHHHHHhc-----cHHHHHHHHHHHHhhcCch
Confidence 46677777777665443211111 111222 222233444445555563 8999999999999988888
Q ss_pred chhhHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHh
Q 009816 185 GWPSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASAL 227 (524)
Q Consensus 185 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l 227 (524)
.++-..--+.+-.++++|-.+++....+-++|..++..++-.+
T Consensus 359 sYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 359 SYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 8888888888888899999999999999999998888776544
No 305
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=76.73 E-value=58 Score=33.51 Aligned_cols=9 Identities=11% Similarity=0.243 Sum_probs=5.9
Q ss_pred HHHhcCCCc
Q 009816 300 IEAWKIPGV 308 (524)
Q Consensus 300 ~~~~~~~~~ 308 (524)
.+++|.|+-
T Consensus 252 gDVFR~P~~ 260 (521)
T PF02990_consen 252 GDVFRPPKH 260 (521)
T ss_pred HHHhcCcCC
Confidence 467777764
No 306
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=69.26 E-value=30 Score=34.84 Aligned_cols=69 Identities=20% Similarity=0.193 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHH---HHHHHHHhhh-HHHHHHHhhhhhhHHHHHH
Q 009816 310 PFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLST---LFDVGGVLGG-ILAGHISDRLDARAITAAS 382 (524)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~-~~~g~l~dr~~~~~~~~~~ 382 (524)
.+.+.+++.+..........|..+++.. .+.|-.+.+.... ++.+ -++-+ ++=....+|+||||..++-
T Consensus 4 lL~~LY~lQGiP~GL~~gsiPflL~~~~---~~~sy~q~~~fSla~~PfSl-KlLWaPiVDs~y~~~~GRRKSWiiP 76 (544)
T PF13000_consen 4 LLVLLYFLQGIPLGLAFGSIPFLLQSMA---KKVSYSQQAIFSLASYPFSL-KLLWAPIVDSVYSKRIGRRKSWIIP 76 (544)
T ss_pred HHHHHHHHcCcccccccccchhhhcccc---CCCChhHheeeeeeechhHH-HHhhhhhhhhhcccccCCcchhhhH
Confidence 3444445554444333456788888721 3666666655432 2222 22222 3335566788999876543
No 307
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=69.04 E-value=43 Score=30.22 Aligned_cols=24 Identities=13% Similarity=0.181 Sum_probs=14.2
Q ss_pred HHHHHhhhhhhHHHHHHHHHHHHH
Q 009816 366 AGHISDRLDARAITAASFMYCAIP 389 (524)
Q Consensus 366 ~g~l~dr~~~~~~~~~~~~~~~~~ 389 (524)
+-+++.|+..|.+...+.+++.+.
T Consensus 260 Gk~lAskIS~rtVt~~ggi~Fi~F 283 (294)
T KOG2881|consen 260 GKYLASKISVRTVTLIGGILFIIF 283 (294)
T ss_pred hHHHhhhheeEEEEEecchhHHHH
Confidence 345677777776665555554443
No 308
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=64.67 E-value=5.1 Score=36.14 Aligned_cols=63 Identities=11% Similarity=0.105 Sum_probs=39.6
Q ss_pred hHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhH
Q 009816 298 GFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGI 364 (524)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 364 (524)
+|..-+++-.+..+.+...+.-........+++.|..+. .+++....+++-.+..+.+...+.
T Consensus 193 ~W~~WF~~v~~YQiAllYmLsRL~iNiSQaYlaFfvidd----lqm~qsakAllP~v~Yl~SF~VS~ 255 (412)
T KOG4830|consen 193 HWTSWFGHVQFYQIALLYMLSRLYINISQAYLAFFVIDD----LQMEQSAKALLPMVAYLSSFSVSM 255 (412)
T ss_pred cchhhhhhhHHHHHHHHHHHHHHHhhhhhhheeeEEeeh----hhHHHHHhhhhHHHHHHhhhhHHh
Confidence 344445555566677777777666666777888887766 567666666665555555444433
No 309
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=60.60 E-value=42 Score=25.59 Aligned_cols=21 Identities=24% Similarity=0.341 Sum_probs=14.5
Q ss_pred HHHHHHHHhhhHHHHHHHhhh
Q 009816 353 TLFDVGGVLGGILAGHISDRL 373 (524)
Q Consensus 353 ~~~~~~~~~~~~~~g~l~dr~ 373 (524)
+.=.+++++.....||+.||+
T Consensus 49 ssefIsGilVGa~iG~llD~~ 69 (116)
T COG5336 49 SSEFISGILVGAGIGWLLDKF 69 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 334455666667778999987
No 310
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=59.74 E-value=1.2e+02 Score=29.61 Aligned_cols=164 Identities=14% Similarity=0.065 Sum_probs=0.0
Q ss_pred HHHHHHHHhhhHHHHHHHhhh-----hhhHHHHHHHHHHHHHHHHHHHhhcchhHH--HHHHHHHHHHhhhhhhhHHHHH
Q 009816 353 TLFDVGGVLGGILAGHISDRL-----DARAITAASFMYCAIPALFFYRSYGHLSLA--LNIALMFITGMFVNGPYALITT 425 (524)
Q Consensus 353 ~~~~~~~~~~~~~~g~l~dr~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~ 425 (524)
.+..+..++..+..|++..|. ...+.+.-...-..+.++++.-........ .-.....+..+...........
T Consensus 2 v~~~i~~i~~ii~~G~~~~~~~~l~~~~~~~ls~lv~~~~lP~liF~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (385)
T PF03547_consen 2 VFSAILPIFLIILLGYLLGRFGILDPEASKGLSKLVFNVFLPALIFSSIANTDTLEDLLSLWFIPVFAFIIFILGLLLGF 81 (385)
T ss_pred cHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHhhhcccccCCCCccchhHHHHHHHhhhhhhhhhhhhhhHhhcccChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 009816 426 AVSADLGTHSSLKGNSRALATVTAIIDGTGSVGAAIGPLLTGYISATSWTAVFTMLMAAALISGLLLTRLVVAEVAAKFV 505 (524)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (524)
.....+.. ++.............+.+..--|.+.....+.+..+.........++...+...+...+.++.+.
T Consensus 82 ~~~~~~~~-------~~~~~~~~~~~~~~~N~~~lglpi~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~~~~ 154 (385)
T PF03547_consen 82 LLSRLFRL-------PKEWRGVFVLAASFGNTGFLGLPILQALFGERGVAYAIIFDVVNNIILWSLGYFLLESRSEKEDK 154 (385)
T ss_pred HHHHhcCC-------CcccceEEEecccCCcchhhHHHHHHHHhcchhhhhehHHHHhhHHHHHHHHHHhhccccccccc
Q ss_pred cccccccCccccccCcCC
Q 009816 506 ESRSQSGNQSRSQAGVLD 523 (524)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~ 523 (524)
++++.++.++.++....+
T Consensus 155 ~~~~~~~~~~~~~~~~~~ 172 (385)
T PF03547_consen 155 SEEEPSSAESIDSEQEDS 172 (385)
T ss_pred ccccccccccccccccCC
No 311
>PF03606 DcuC: C4-dicarboxylate anaerobic carrier; InterPro: IPR018385 Escherichia coli contains four different secondary carriers (DcuA, DcuB, DcuC, and DctA) for C4-dicarboxylates [, , , ] DcuA is used for aerobic growth on C4-dicarboxylates [, ], whereas the Dcu carriers (encoded by the dcuA, dcuB, and dcuC genes) are used under anaerobic conditions and form a distinct family of carriers [, , , , , ]. Each of the Dcu carriers is able to catalyze the uptake, antiport, and possibly also efflux of C4-dicarboxylates. DcuB is the major C4-dicarboxylate carrier for fumarate respiration with high fumarate-succinate exchange activity. It is synthesized only in the absence of oxygen and nitrate and in the presence of C4-dicarboxylates [, , , ]. DcuA is expressed constitutively in aerobic and anaerobic growth and can substitute for DcuB [, ]. These proteins are members of the C4-dicarboxylate Uptake C (DcuC) family. DcuC has 12 GES predicted transmembrane regions, is induced only under anaerobic conditions, and is not repressed by glucose. DcuC may therefore function as a succinate efflux system during anaerobic glucose fermentation. However, when overexpressed, it can replace either DcuA or DcuB in catalyzing fumarate-succinate exchange and fumarate uptake [, ]. DcuC shows the same transport modes as DcuA and DcuB (exchange, uptake, and presumably efflux of C4-dicarboxylates) [].; GO: 0016021 integral to membrane
Probab=59.51 E-value=94 Score=31.48 Aligned_cols=12 Identities=8% Similarity=0.102 Sum_probs=6.2
Q ss_pred HHHHhhhhhhHH
Q 009816 367 GHISDRLDARAI 378 (524)
Q Consensus 367 g~l~dr~~~~~~ 378 (524)
..+.+|+++++.
T Consensus 105 ~~l~k~l~~~~~ 116 (465)
T PF03606_consen 105 NLLIKPLKGKKN 116 (465)
T ss_pred HHHHHHhcCCcc
Confidence 345566655443
No 312
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=59.17 E-value=96 Score=29.53 Aligned_cols=69 Identities=9% Similarity=-0.048 Sum_probs=39.4
Q ss_pred HHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHH
Q 009816 356 DVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTAVS 428 (524)
Q Consensus 356 ~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 428 (524)
.+.-+..+++.+.+.+++|-|+++.++..........- ..+.+...+......|++.+..+..--+++.
T Consensus 68 y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~N----l~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT 136 (390)
T KOG3097|consen 68 YLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAAN----LEPRYETLVPAGLVLGMAAGPIWASKGTYLT 136 (390)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhh----cchhHHhhccHHHhhccccccccccCcceec
Confidence 34444556666688899999998766554443322211 1233444455666677777766654444443
No 313
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=57.19 E-value=42 Score=32.16 Aligned_cols=94 Identities=13% Similarity=0.041 Sum_probs=70.5
Q ss_pred hHHHHHHHHHHHhhhhhhhcccccCCchhh--HHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchhhHH
Q 009816 113 GELDLAFLSIYAGGMFFSGHLGDRLDLRIF--LTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWPSVV 190 (524)
Q Consensus 113 g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~--l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~ 190 (524)
|.+-++..+..+++.+..|.+--++.|..- +.++.+.-+...++++-. +++|..++.-++.+.......+.+.
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t-----~~Iw~~Ya~yvlfr~~y~l~itiA~ 348 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQT-----QHIWVCYAGYVLFRVIYQLTITIAT 348 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcc-----cceehhhhhHHHHHhhHhhhhhHHH
Confidence 555567777888899999999988887643 444444445555555554 8899888888888777777888888
Q ss_pred HHHhhccccccccceehhhhh
Q 009816 191 AVVGNWFGKSKRGLIMGIWNA 211 (524)
Q Consensus 191 ~~i~~~~~~~~r~~~~~~~~~ 211 (524)
.-+++...++.-|..+|+...
T Consensus 349 ~~iA~nL~~e~~gLvFGiNTF 369 (433)
T KOG3810|consen 349 FQIARNLSSELFGLVFGINTF 369 (433)
T ss_pred HHHHHhhhhhhheeeeehHHH
Confidence 888888888888888887654
No 314
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=56.63 E-value=1.7e+02 Score=27.17 Aligned_cols=80 Identities=14% Similarity=0.031 Sum_probs=43.9
Q ss_pred HHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHH
Q 009816 299 FIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAI 378 (524)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~ 378 (524)
.++..++|+.+............++....|.|. +-...++++=+.++-+.+++-..+ ++-||+.|-..
T Consensus 62 ~~~~~~~p~~~~~~~l~a~li~~nW~lfiWAvn----------~g~~leaSLGY~InPL~~VllG~l--flkErls~~Q~ 129 (293)
T COG2962 62 LKQLLKQPKTLLMLALTALLIGLNWWLFIWAVN----------NGHVLEASLGYFINPLVNVLLGRL--FLKERLSRLQW 129 (293)
T ss_pred HHHHHhCcHHHHHHHHHHHHHHHHHHHhheecC----------CCchhHHHhHHHHHHHHHHHHHHH--HHHhhccHHHH
Confidence 456788887766665555544455544444332 223445555444544444433222 46788888777
Q ss_pred HHHHHHHHHHHH
Q 009816 379 TAASFMYCAIPA 390 (524)
Q Consensus 379 ~~~~~~~~~~~~ 390 (524)
+.++...+++..
T Consensus 130 iAV~lA~~GV~~ 141 (293)
T COG2962 130 IAVGLAAAGVLI 141 (293)
T ss_pred HHHHHHHHHHHH
Confidence 766655555443
No 315
>KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=55.38 E-value=1.6e+02 Score=30.07 Aligned_cols=32 Identities=38% Similarity=0.459 Sum_probs=20.2
Q ss_pred CCChhhhhhHHHHHHHHHHhhhHHHHHHHhhh
Q 009816 342 YLSSEMAGNLSTLFDVGGVLGGILAGHISDRL 373 (524)
Q Consensus 342 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~ 373 (524)
-+++..-|-+++..-+..++.++++|+.+.|+
T Consensus 355 flSPs~RGsLmT~~~~l~v~~G~~agY~s~rl 386 (628)
T KOG1278|consen 355 FLSPSSRGSLMTAMVLLFVFMGFVAGYVSARL 386 (628)
T ss_pred cCCccccccHHHHHHHHHHHHHHhhhhhhhhh
Confidence 34666666666655555666667777776665
No 316
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=55.09 E-value=1.5e+02 Score=26.08 Aligned_cols=36 Identities=17% Similarity=0.472 Sum_probs=18.9
Q ss_pred eehhhhhhhhhHHHHHHHHHHHhhh-cCchhHHHHhHH
Q 009816 205 IMGIWNAHTSIGNITGSLVASALLT-YGWGWSFVVPGL 241 (524)
Q Consensus 205 ~~~~~~~~~~~G~~ig~~l~~~l~~-~gwr~~f~~~~~ 241 (524)
.-.......-++..+|..+++++.+ .+. +..++.++
T Consensus 163 ~~~~~~~~~i~~f~~Ga~~ga~l~~~~~~-~al~~~~~ 199 (209)
T PF06912_consen 163 RRALRYLLIILSFFIGAILGALLYRRLGF-WALLLPAL 199 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHH
Confidence 3344455555566666666666663 453 33444333
No 317
>PRK10263 DNA translocase FtsK; Provisional
Probab=52.81 E-value=2.8e+02 Score=31.92 Aligned_cols=24 Identities=25% Similarity=0.372 Sum_probs=14.6
Q ss_pred HHHHHHHhhhHHHHHHHhhhhhhH
Q 009816 354 LFDVGGVLGGILAGHISDRLDARA 377 (524)
Q Consensus 354 ~~~~~~~~~~~~~g~l~dr~~~~~ 377 (524)
+.+.++.+|..+...+..-+|.-.
T Consensus 60 V~Nl~GiVGA~LAD~L~~LFGl~A 83 (1355)
T PRK10263 60 IHNLGGMPGAWLADTLFFIFGVMA 83 (1355)
T ss_pred cccccchHHHHHHHHHHHHHhHHH
Confidence 445666677766666666666433
No 318
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=51.67 E-value=1.5e+02 Score=28.42 Aligned_cols=9 Identities=22% Similarity=0.076 Sum_probs=4.2
Q ss_pred ccccCCchh
Q 009816 133 LGDRLDLRI 141 (524)
Q Consensus 133 l~Dr~Grr~ 141 (524)
+.-|.++++
T Consensus 62 ~~~r~~~~~ 70 (334)
T PF06027_consen 62 LLYRRGFKK 70 (334)
T ss_pred hhhcccccc
Confidence 334555544
No 319
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=46.65 E-value=3.2e+02 Score=27.44 Aligned_cols=117 Identities=10% Similarity=0.000 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHH
Q 009816 313 LCLFFAKLVAYTFLYWLPFYVSHTAVDGKYLSSEMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALF 392 (524)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 392 (524)
+..+-..+..++-....|...... .|++.++...+.+.--+.+-+++++--....+.|.|-....+.....+.-+.
T Consensus 20 ~lglQH~lamfg~~V~VPlivg~a----~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG~sFafi~p~i 95 (451)
T COG2233 20 LLGLQHLLAMFGATVLVPLLVGLA----LGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSYLGSSFAFVAPMI 95 (451)
T ss_pred HHHHHHHHHHHhcchHhhHHhccC----CCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEechHHHHHHHH
Confidence 333444455566667777777766 7999999998888777777777776544333344454444443333333333
Q ss_pred HHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHHhhhcc
Q 009816 393 FYRSYGHLSLALNIALMFITGMFVNGPYALITTAVSADLGT 433 (524)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 433 (524)
.................+..|+.+..........+.+.+||
T Consensus 96 ~~~~~~g~~~~~~~G~ii~ag~~~~li~~~~~~~l~rlfPP 136 (451)
T COG2233 96 AIGGTTGDGIAALLGGIIAAGLVYFLISPIVKIRLARLFPP 136 (451)
T ss_pred HHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 22211011233334444444444433322222266677775
No 320
>PRK02237 hypothetical protein; Provisional
Probab=38.64 E-value=62 Score=24.79 Aligned_cols=49 Identities=12% Similarity=0.080 Sum_probs=39.3
Q ss_pred HhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhcc
Q 009816 112 LGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIG 160 (524)
Q Consensus 112 ~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a 160 (524)
.|=+.++|.-.+.+.++++++..|+.-+-+-=.+|..+..++..+..++
T Consensus 58 ~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 58 FGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred hhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 5778899999999999999999999987777667777766666655443
No 321
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=38.51 E-value=60 Score=24.79 Aligned_cols=51 Identities=14% Similarity=0.099 Sum_probs=41.8
Q ss_pred hhHhHHHHHHHHHHHhhhhhhhcccccCCchhhHHHHHHHHHHHHHHHhcc
Q 009816 110 ALLGELDLAFLSIYAGGMFFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIG 160 (524)
Q Consensus 110 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a 160 (524)
...|=+.++|.-.+.+.++++++..|+.-+-+-=.++..+..++..+..++
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 557888899999999999999999999988777777777777776665553
No 322
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=37.89 E-value=3e+02 Score=25.72 Aligned_cols=57 Identities=11% Similarity=-0.014 Sum_probs=35.0
Q ss_pred HHHHHHHHHHhhhcchhhHHHHHhhccccccccceehhhhhhhhhHHHHHHHHHHHhh
Q 009816 171 YLVVQMLAGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNITGSLVASALL 228 (524)
Q Consensus 171 ~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~ 228 (524)
.-..|.+.|+-.- .+..++++++-.||++++--..--...+.+++.++-|++|-.+.
T Consensus 22 ~~~lr~~~g~~~v-lf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l~ 78 (287)
T PF07760_consen 22 IPPLRVILGFPFV-LFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLLN 78 (287)
T ss_pred hhHHHHHHHHHHH-HHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5678888887753 34667899999998554433222333334444455566666655
No 323
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=37.29 E-value=1e+02 Score=28.73 Aligned_cols=36 Identities=17% Similarity=0.186 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhh
Q 009816 144 TVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQS 183 (524)
Q Consensus 144 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~ 183 (524)
+.+.+++++++++..++ .++.+.+.+.-++.+++.+
T Consensus 3 ~~~~~~~~~~s~~~~l~----~~~~~l~~~~~~~~~F~~~ 38 (284)
T PF12805_consen 3 IATLLCFALASLLVGLL----FPYPWLLILVLALLTFFFG 38 (284)
T ss_pred HHHHHHHHHHHHHHHHH----hhccHHHHHHHHHHHHHHH
Confidence 34445554555555554 2455555555555555544
No 324
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=33.42 E-value=1.8e+02 Score=26.61 Aligned_cols=6 Identities=17% Similarity=0.025 Sum_probs=2.2
Q ss_pred HHHHHH
Q 009816 480 MLMAAA 485 (524)
Q Consensus 480 ~~~~~~ 485 (524)
..++.+
T Consensus 119 ~~G~~l 124 (254)
T PF07857_consen 119 YIGVAL 124 (254)
T ss_pred HHHHHH
Confidence 333333
No 325
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=31.85 E-value=1.7e+02 Score=22.46 Aligned_cols=56 Identities=13% Similarity=0.001 Sum_probs=37.4
Q ss_pred hhhhcccccCCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhcchh
Q 009816 128 FFSGHLGDRLDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQSTGWP 187 (524)
Q Consensus 128 ~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~~~~ 187 (524)
-..=+.+|.+.|+...+...+...++..+.+.+ ..+.+.=.+.-+-.|+|......
T Consensus 18 ~~~lK~s~gf~~~~~~il~~v~~~~sf~~Ls~a----lk~ipvgvAYAiW~GiG~v~~~l 73 (106)
T COG2076 18 TTLLKYSDGFTRLWPSILTIVGYGLSFYLLSLA----LKTIPLGVAYAIWTGIGIVGTAL 73 (106)
T ss_pred HHHHHHHhcccccchHHHHHHHHHHHHHHHHHH----HhhCchHHHHHHHHHHHHHHHHH
Confidence 344477888888888887777777777777776 45555555555666666554433
No 326
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=31.75 E-value=1e+02 Score=23.56 Aligned_cols=48 Identities=10% Similarity=0.148 Sum_probs=38.4
Q ss_pred hhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHH
Q 009816 346 EMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFF 393 (524)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 393 (524)
...|=.++.++...++.+++.++..|+..+.+.=.++..++.++..++
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI 101 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAII 101 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHhe
Confidence 556778889999999999999999999887777667777666665554
No 327
>PF11023 DUF2614: Protein of unknown function (DUF2614); InterPro: IPR020912 This entry describes proteins of unknown function, which are thought to be membrane proteins.; GO: 0005887 integral to plasma membrane
Probab=29.84 E-value=2.7e+02 Score=21.62 Aligned_cols=19 Identities=16% Similarity=0.336 Sum_probs=9.7
Q ss_pred HhhhhhhHHHHHHHHHHHH
Q 009816 370 SDRLDARAITAASFMYCAI 388 (524)
Q Consensus 370 ~dr~~~~~~~~~~~~~~~~ 388 (524)
+.|+++-|......++.+.
T Consensus 5 ~~KiN~~R~~al~lif~g~ 23 (114)
T PF11023_consen 5 SSKINKIRTFALSLIFIGM 23 (114)
T ss_pred hhHHHHHHHHHHHHHHHHH
Confidence 3456666655544444433
No 328
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=28.69 E-value=2e+02 Score=23.80 Aligned_cols=52 Identities=15% Similarity=0.194 Sum_probs=37.0
Q ss_pred chhHHHHHHHHHHHHHhhhcchhhHHHHHhhccccccccceehhhhhhhhhHHHH
Q 009816 165 VHSFYYYLVVQMLAGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNIT 219 (524)
Q Consensus 165 ~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~i 219 (524)
.+++..++..-++.|+|. ..+.|.+++.-.++++-|..+|+-..-.+++-+.
T Consensus 94 vP~~~~~~~S~~~Fg~gl---lGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 94 VPPWAVLLVSLVFFGLGL---LGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred cCchHHHHHHHHHHHHHH---HhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 356666777666666654 3455667777777888999999988877776554
No 329
>PRK02237 hypothetical protein; Provisional
Probab=27.56 E-value=1.7e+02 Score=22.44 Aligned_cols=48 Identities=13% Similarity=0.094 Sum_probs=38.0
Q ss_pred hhhhhHHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHH
Q 009816 346 EMAGNLSTLFDVGGVLGGILAGHISDRLDARAITAASFMYCAIPALFF 393 (524)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 393 (524)
...|=.+..++...++.+++.++..|+...-+.=.++..++.++..++
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI 103 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVI 103 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHh
Confidence 347788899999999999999999999877776666766666665544
No 330
>PF08611 DUF1774: Fungal protein of unknown function (DUF1774); InterPro: IPR013920 This is a fungal protein of unknown function.
Probab=26.97 E-value=2.7e+02 Score=21.03 Aligned_cols=20 Identities=15% Similarity=0.345 Sum_probs=11.2
Q ss_pred ChhHHHHHHHHHHHHHHHHH
Q 009816 473 SWTAVFTMLMAAALISGLLL 492 (524)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~ 492 (524)
.|-.+|.+.+++.+.+....
T Consensus 51 QWIFAFvI~avlfv~sl~va 70 (97)
T PF08611_consen 51 QWIFAFVIAAVLFVLSLVVA 70 (97)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 45566666666655544433
No 331
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=26.52 E-value=2.1e+02 Score=21.26 Aligned_cols=31 Identities=16% Similarity=0.010 Sum_probs=21.6
Q ss_pred ceehhhhhhhhhHHHHHHHHHHHhhhcCchh
Q 009816 204 LIMGIWNAHTSIGNITGSLVASALLTYGWGW 234 (524)
Q Consensus 204 ~~~~~~~~~~~~G~~ig~~l~~~l~~~gwr~ 234 (524)
.+-=+.+....+|.++|-+.|.+..+++|-.
T Consensus 23 kaEr~~q~ilti~aiVg~i~Gf~~Qqls~tv 53 (101)
T KOG4112|consen 23 KAERFQQLILTIGAIVGFIYGFAQQQLSVTV 53 (101)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444567777788888888887766766543
No 332
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=25.94 E-value=1.2e+02 Score=26.01 Aligned_cols=23 Identities=17% Similarity=0.301 Sum_probs=20.4
Q ss_pred HHHHHHHHhhhhhhhcccccCCc
Q 009816 117 LAFLSIYAGGMFFSGHLGDRLDL 139 (524)
Q Consensus 117 s~~~l~~~~~~~~~G~l~Dr~Gr 139 (524)
.-|.+++.+++.+.|++.||..+
T Consensus 89 gGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 89 GGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhc
Confidence 56888999999999999999885
No 333
>PRK02935 hypothetical protein; Provisional
Probab=25.46 E-value=3.1e+02 Score=20.95 Aligned_cols=56 Identities=7% Similarity=0.160 Sum_probs=25.0
Q ss_pred HHhhhhhhHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhhhHHHHHH
Q 009816 369 ISDRLDARAITAASFMYCAIPALFFYRSYGHLSLALNIALMFITGMFVNGPYALITTA 426 (524)
Q Consensus 369 l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 426 (524)
-+.|+++-|......++.+.....+..+. ....++.....++|+..-......+.+
T Consensus 5 ~ssKINkiRt~aL~lvfiG~~vMy~Giff--~~~~~~m~ifm~~G~l~~l~S~vvYFw 60 (110)
T PRK02935 5 YSNKINKIRTFALSLVFIGFIVMYLGIFF--RESIIIMTIFMLLGFLAVIASTVVYFW 60 (110)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHh--cccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567776666555544444333333222 222333444444565443333333333
No 334
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=25.12 E-value=1.4e+02 Score=24.61 Aligned_cols=26 Identities=19% Similarity=0.218 Sum_probs=22.1
Q ss_pred HHHHHHHHHhhhhhhhcccccCCchh
Q 009816 116 DLAFLSIYAGGMFFSGHLGDRLDLRI 141 (524)
Q Consensus 116 ~s~~~l~~~~~~~~~G~l~Dr~Grr~ 141 (524)
+.-|.+++.+.+.+.|++.+|..+++
T Consensus 59 TgGyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 59 TGGYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred CChHHHHHHHHHHHHHHHHHhccccc
Confidence 35688999999999999999988764
No 335
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=24.81 E-value=2.3e+02 Score=30.46 Aligned_cols=52 Identities=6% Similarity=-0.096 Sum_probs=33.2
Q ss_pred hhhccccc----CCchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhc
Q 009816 129 FSGHLGDR----LDLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQST 184 (524)
Q Consensus 129 ~~G~l~Dr----~Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~ 184 (524)
+++-++|. -||.+-++++.++++++++...+. .+..+.+...-++.+++.++
T Consensus 42 ia~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll----~~~p~lf~~~l~~~tf~~~m 97 (704)
T TIGR01666 42 IAAALVDLDDRLTGRLKNVIFTLICFSIASFSVELL----FGKPWLFAVGLTVSTFGFIM 97 (704)
T ss_pred HhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHH----hcCcHHHHHHHHHHHHHHHH
Confidence 34556664 356677888888888888877765 35555666666555555443
No 336
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=24.73 E-value=3.3e+02 Score=20.94 Aligned_cols=14 Identities=29% Similarity=0.411 Sum_probs=8.2
Q ss_pred hhhhhhHHHHHHHH
Q 009816 371 DRLDARAITAASFM 384 (524)
Q Consensus 371 dr~~~~~~~~~~~~ 384 (524)
+|..+++.......
T Consensus 84 er~~~~~~~a~~l~ 97 (113)
T PF13536_consen 84 ERLSPRRWLAILLI 97 (113)
T ss_pred CCCCHHHHHHHHHH
Confidence 56777766544333
No 337
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=24.71 E-value=88 Score=22.36 Aligned_cols=33 Identities=24% Similarity=0.482 Sum_probs=19.5
Q ss_pred hhhhhhhHhhcccChhHHHHHHHHHHHHHHHHHH
Q 009816 460 AIGPLLTGYISATSWTAVFTMLMAAALISGLLLT 493 (524)
Q Consensus 460 ~i~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 493 (524)
++-+.+.|++.+. +..+++..++..++++++..
T Consensus 21 ~iisfi~Gy~~q~-~~~~~~~~~~g~~~~~lv~v 53 (76)
T PF06645_consen 21 AIISFIVGYITQS-FSYTFYIYGAGVVLTLLVVV 53 (76)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhhee
Confidence 3344566666654 66677776666666555543
No 338
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=24.69 E-value=3e+02 Score=29.62 Aligned_cols=53 Identities=9% Similarity=-0.042 Sum_probs=34.3
Q ss_pred hhhhcccccC----CchhhHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHhhhc
Q 009816 128 FFSGHLGDRL----DLRIFLTVGMVGTGLFTSLYGIGYWGNVHSFYYYLVVQMLAGLFQST 184 (524)
Q Consensus 128 ~~~G~l~Dr~----Grr~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~r~l~G~~~~~ 184 (524)
.+++-+.|.= ||.+-++++.++++++++...+. .+..+.+...-++.+++.++
T Consensus 41 ~ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll----~~~p~~~~~~l~~~tf~~~m 97 (701)
T TIGR01667 41 IIAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLL----FPKPWLFPFLLTLLTFGFIL 97 (701)
T ss_pred hHhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHH----hcchHHHHHHHHHHHHHHHH
Confidence 4445566643 45677888888988888888775 35555555555555555443
No 339
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=24.36 E-value=5.5e+02 Score=23.49 Aligned_cols=25 Identities=16% Similarity=0.143 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhc
Q 009816 312 ALCLFFAKLVAYTFLYWLPFYVSHT 336 (524)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (524)
.+...+.....++.+..=..|+++.
T Consensus 184 G~~LAv~aGvlyGs~fvPv~Yi~~~ 208 (254)
T PF07857_consen 184 GIILAVFAGVLYGSNFVPVIYIQDH 208 (254)
T ss_pred hHHHHHHHHHHHhcccchHHHHHhC
Confidence 3333444445556555555666664
No 340
>COG4327 Predicted membrane protein [Function unknown]
Probab=24.20 E-value=97 Score=22.82 Aligned_cols=11 Identities=18% Similarity=0.383 Sum_probs=6.9
Q ss_pred ChhHHHHHHHH
Q 009816 473 SWTAVFTMLMA 483 (524)
Q Consensus 473 ~~~~~~~~~~~ 483 (524)
||...|++..=
T Consensus 49 g~pf~ywma~Q 59 (101)
T COG4327 49 GWPFGYWMAQQ 59 (101)
T ss_pred ccchhhhhhcC
Confidence 66667776543
No 341
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=23.59 E-value=2.3e+02 Score=21.57 Aligned_cols=35 Identities=17% Similarity=-0.018 Sum_probs=19.3
Q ss_pred HHHHHHhhhhhhhcccc-cCCchhhHHHHHHHHHHH
Q 009816 119 FLSIYAGGMFFSGHLGD-RLDLRIFLTVGMVGTGLF 153 (524)
Q Consensus 119 ~~l~~~~~~~~~G~l~D-r~Grr~~l~~~~~~~~~~ 153 (524)
..+...+.+.+.|...| +|+-++.+.+.+++.+++
T Consensus 51 ~~v~pil~G~~lG~WLD~~~~t~~~~tl~~lllGv~ 86 (100)
T TIGR02230 51 SVAIPTLLGVAVGIWLDRHYPSPFSWTLTMLIVGVV 86 (100)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHH
Confidence 44444555566666666 467666555555444433
No 342
>PTZ00370 STEVOR; Provisional
Probab=22.84 E-value=3.3e+02 Score=25.19 Aligned_cols=24 Identities=17% Similarity=0.159 Sum_probs=9.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHH
Q 009816 474 WTAVFTMLMAAALISGLLLTRLVV 497 (524)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~ 497 (524)
|..+.+++.++.++..++..++++
T Consensus 257 ygiaalvllil~vvliilYiwlyr 280 (296)
T PTZ00370 257 YGIAALVLLILAVVLIILYIWLYR 280 (296)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHH
Confidence 343334443333333333333333
No 343
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=22.66 E-value=1.1e+02 Score=23.39 Aligned_cols=29 Identities=17% Similarity=0.264 Sum_probs=21.5
Q ss_pred cCchhHHHHhHHHHHHHHHHHHHhcCCCC
Q 009816 230 YGWGWSFVVPGLIIAFVGLIVFLFLPVNP 258 (524)
Q Consensus 230 ~gwr~~f~~~~~~~~~~~~~~~~~~~~~~ 258 (524)
.+|+.+|++...++++.+.+.+.+.||..
T Consensus 57 e~we~~~f~~~~~~~v~~~~~~~y~PD~~ 85 (105)
T PF10183_consen 57 EGWELPFFFGFSGSLVFGGVFLAYKPDTS 85 (105)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 57999999877777777676777777653
No 344
>PF15048 OSTbeta: Organic solute transporter subunit beta protein
Probab=22.53 E-value=1.6e+02 Score=23.29 Aligned_cols=19 Identities=16% Similarity=0.371 Sum_probs=11.1
Q ss_pred ChhHHHHHHHHHHHHHHHH
Q 009816 473 SWTAVFTMLMAAALISGLL 491 (524)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~ 491 (524)
.|++....+++++++..++
T Consensus 34 pWNysiL~Ls~vvlvi~~~ 52 (125)
T PF15048_consen 34 PWNYSILALSFVVLVISFF 52 (125)
T ss_pred CcchHHHHHHHHHHHHHHH
Confidence 6777766666555544433
No 345
>COG2836 Uncharacterized conserved protein [Function unknown]
Probab=22.14 E-value=5.7e+02 Score=22.84 Aligned_cols=31 Identities=19% Similarity=0.158 Sum_probs=26.1
Q ss_pred CChhhhhhHHHHHHHHHHhhhHHHHHHHhhh
Q 009816 343 LSSEMAGNLSTLFDVGGVLGGILAGHISDRL 373 (524)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~ 373 (524)
-|+.+-+..+..++++....-+..|..++++
T Consensus 161 gS~~~Gal~mlaFGlGTlP~ll~~G~~s~~~ 191 (232)
T COG2836 161 GSAFEGALVMLAFGLGTLPNLLAMGIFSSKL 191 (232)
T ss_pred CCHHHHHHHHHHHhhcccHHHHHHHHHHHHH
Confidence 4778888889999999888888888888876
No 346
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=20.88 E-value=1.5e+02 Score=26.52 Aligned_cols=63 Identities=27% Similarity=0.388 Sum_probs=44.9
Q ss_pred HHHHHHHHhhhcchhhHHHHHhhccc---cccccceehhhhhhhhhHHHHHHHHHHHhhhcCchhHH
Q 009816 173 VVQMLAGLFQSTGWPSVVAVVGNWFG---KSKRGLIMGIWNAHTSIGNITGSLVASALLTYGWGWSF 236 (524)
Q Consensus 173 ~~r~l~G~~~~~~~~~~~~~i~~~~~---~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~gwr~~f 236 (524)
.-|=-.|...+..--...+++.|-|. +|-|| .++.+-.+.-+|.+.-.++++++...+|-.+.
T Consensus 110 lkREaIGat~SI~REp~laiI~ekYGldSpEgrG-Vl~~Yi~GTvfGtiffsllas~~a~~~~fhP~ 175 (241)
T PF11299_consen 110 LKREAIGATFSIGREPNLAIISEKYGLDSPEGRG-VLGVYIIGTVFGTIFFSLLASLLASLGIFHPY 175 (241)
T ss_pred ccHHhhcceeecccCcceeeeehhcCCCCccccc-eEEEeeehhhHHHHHHHHHHHHHHhccCCCHH
Confidence 34555666666665666788888883 34565 68888888889999988888888776654443
No 347
>PF06783 UPF0239: Uncharacterised protein family (UPF0239); InterPro: IPR009621 This is a group of transmembrane proteins of unknown function.; GO: 0016021 integral to membrane
Probab=20.68 E-value=2.4e+02 Score=20.59 Aligned_cols=20 Identities=15% Similarity=0.275 Sum_probs=12.1
Q ss_pred hhHHHHhHHHHHHHHHHHHH
Q 009816 233 GWSFVVPGLIIAFVGLIVFL 252 (524)
Q Consensus 233 r~~f~~~~~~~~~~~~~~~~ 252 (524)
|+-.++.|++-+++.+.+.+
T Consensus 23 RYGLf~GAIFQliCilAiI~ 42 (85)
T PF06783_consen 23 RYGLFVGAIFQLICILAIIL 42 (85)
T ss_pred HHHHHHHHHHHHHHHHheee
Confidence 55567777777776444333
No 348
>PRK13629 threonine/serine transporter TdcC; Provisional
Probab=20.43 E-value=8.8e+02 Score=24.38 Aligned_cols=44 Identities=14% Similarity=0.118 Sum_probs=26.3
Q ss_pred cccccceehhhhhhhhhHHHHHHHHHHHhhhcCchhHHHHhHHHHHHH
Q 009816 199 KSKRGLIMGIWNAHTSIGNITGSLVASALLTYGWGWSFVVPGLIIAFV 246 (524)
Q Consensus 199 ~~~r~~~~~~~~~~~~~G~~ig~~l~~~l~~~gwr~~f~~~~~~~~~~ 246 (524)
+++.+...++..++.+.|.+.-|+..+. +|-++..+..+++...
T Consensus 19 ~~d~~W~l~l~GTAIGAGmLfLPI~~g~----~Gf~p~lillll~~p~ 62 (443)
T PRK13629 19 KSDTTWTLGLFGTAIGAGVLFFPIRAGF----GGLIPILLMLVLAYPI 62 (443)
T ss_pred cccchHHHHHHHHHHhHHHHHHHHHHhc----chHHHHHHHHHHHHHH
Confidence 4455666777777777777777766554 3555555544444443
No 349
>PF04277 OAD_gamma: Oxaloacetate decarboxylase, gamma chain ; InterPro: IPR005899 This family comprises distantly related, low complexity, hydrophobic small subunits of several related sodium ion-pumping decarboxylases. These include oxaloacetate decarboxylase gamma subunit and methylmalonyl-CoA decarboxylase delta subunit [].; GO: 0008948 oxaloacetate decarboxylase activity, 0015081 sodium ion transmembrane transporter activity, 0071436 sodium ion export, 0016020 membrane
Probab=20.18 E-value=2.2e+02 Score=20.22 Aligned_cols=9 Identities=33% Similarity=0.519 Sum_probs=3.6
Q ss_pred HHHHHHHHH
Q 009816 476 AVFTMLMAA 484 (524)
Q Consensus 476 ~~~~~~~~~ 484 (524)
.+|.++.++
T Consensus 14 iVF~~L~lL 22 (79)
T PF04277_consen 14 IVFLVLILL 22 (79)
T ss_pred HHHHHHHHH
Confidence 344444333
Done!