Query 009819
Match_columns 524
No_of_seqs 327 out of 2566
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 13:42:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009819.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009819hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3a1f_A Cytochrome B-245 heavy 99.9 5.3E-25 1.8E-29 203.5 12.8 183 223-522 1-186 (186)
2 4eh1_A Flavohemoprotein; struc 99.9 3.6E-24 1.2E-28 207.2 18.3 84 222-319 98-181 (243)
3 3jqq_A Ferredoxin NADP reducta 99.9 2.4E-24 8.3E-29 219.2 12.3 95 222-320 150-251 (316)
4 1tvc_A Methane monooxygenase c 99.9 4.1E-23 1.4E-27 201.5 18.3 86 222-318 100-185 (250)
5 1qfj_A Protein (flavin reducta 99.9 6.1E-23 2.1E-27 197.6 18.5 87 222-319 85-171 (232)
6 3vo2_A Putative uncharacterize 99.9 6.1E-23 2.1E-27 207.5 17.8 93 222-319 140-233 (310)
7 4fk8_A Ferredoxin--NADP reduct 99.9 3.3E-23 1.1E-27 204.5 14.9 70 222-298 103-174 (271)
8 4g1v_A Flavohemoglobin; three 99.9 1.2E-22 4.2E-27 211.9 19.7 85 222-317 251-339 (399)
9 3lo8_A Ferredoxin--NADP reduct 99.9 8.9E-23 3E-27 205.7 17.6 93 222-319 141-235 (311)
10 2r6h_A NADH:ubiquinone oxidore 99.9 2.7E-22 9.4E-27 199.2 17.7 87 222-319 140-226 (290)
11 1krh_A Benzoate 1,2-dioxygenas 99.9 1.8E-22 6.3E-27 205.6 16.6 86 222-319 194-279 (338)
12 1fdr_A Flavodoxin reductase; f 99.9 8.5E-22 2.9E-26 191.4 19.1 88 222-319 87-176 (248)
13 1cqx_A Flavohemoprotein; globi 99.9 1.5E-21 5.2E-26 203.4 18.7 86 222-319 249-334 (403)
14 2bmw_A Ferredoxin--NADP reduct 99.9 1.7E-21 5.9E-26 195.5 17.9 93 222-319 130-227 (304)
15 1gvh_A Flavohemoprotein; oxido 99.9 1.1E-21 3.6E-26 204.2 16.3 87 222-319 242-328 (396)
16 1fnb_A Ferredoxin-NADP+ reduct 99.9 3.2E-21 1.1E-25 194.9 18.8 93 222-319 144-237 (314)
17 2pia_A Phthalate dioxygenase r 99.9 5.9E-21 2E-25 194.1 19.4 67 222-297 95-161 (321)
18 2bgi_A Ferredoxin-NADP(H) redu 99.9 1.4E-20 4.7E-25 186.5 19.5 90 222-318 101-196 (272)
19 2b5o_A FNR, ferredoxin--NADP r 99.9 5.9E-21 2E-25 200.7 17.1 92 222-319 232-325 (402)
20 2qdx_A Ferredoxin reductase; o 99.9 1.4E-20 4.9E-25 184.2 18.1 90 222-318 87-182 (257)
21 2rc5_A Ferredoxin-NADP reducta 99.8 9.8E-21 3.4E-25 191.0 16.9 90 222-319 146-237 (314)
22 2eix_A NADH-cytochrome B5 redu 99.8 4.5E-21 1.5E-25 185.7 12.7 123 222-354 99-222 (243)
23 1ep3_B Dihydroorotate dehydrog 99.8 1.1E-19 3.8E-24 179.1 17.7 67 222-297 91-159 (262)
24 2cnd_A NADH-dependent nitrate 99.8 2.3E-19 7.7E-24 176.4 13.5 126 222-355 109-248 (270)
25 1umk_A B5R, NADH-cytochrome B5 99.8 1.7E-19 5.7E-24 178.1 12.3 125 222-355 113-254 (275)
26 1ddg_A Sulfite reductase (NADP 99.7 4.9E-17 1.7E-21 169.8 9.2 87 222-319 209-297 (374)
27 4dql_A Bifunctional P-450/NADP 99.6 9.8E-16 3.3E-20 161.0 14.8 91 221-319 222-313 (393)
28 1f20_A Nitric-oxide synthase; 99.5 7.5E-14 2.6E-18 148.4 14.9 92 222-319 261-354 (435)
29 2gpj_A Siderophore-interacting 99.5 1.8E-13 6.2E-18 134.5 16.5 57 222-288 96-152 (252)
30 2qtl_A MSR;, methionine syntha 99.5 1E-13 3.5E-18 151.3 16.0 95 221-320 359-455 (539)
31 1tll_A Nitric-oxide synthase, 99.5 4.9E-13 1.7E-17 149.7 15.7 92 222-319 482-575 (688)
32 3qfs_A CPR, P450R, NADPH--cyto 99.4 4.9E-13 1.7E-17 143.3 12.5 91 222-319 289-380 (458)
33 3lyu_A Putative hydrogenase; t 99.4 3.8E-13 1.3E-17 122.0 9.1 62 223-294 3-64 (142)
34 3qe2_A CPR, P450R, NADPH--cyto 99.4 1.2E-12 4E-17 144.9 12.1 91 222-319 449-540 (618)
35 2bpo_A CPR, P450R, NADPH-cytoc 99.4 2E-12 6.7E-17 144.7 12.5 77 239-319 524-604 (682)
36 3lrx_A Putative hydrogenase; a 99.4 1E-12 3.4E-17 121.2 8.4 63 222-294 6-69 (158)
37 2eix_A NADH-cytochrome B5 redu 82.3 1.1 3.9E-05 42.2 4.5 51 12-63 39-91 (243)
38 1umk_A B5R, NADH-cytochrome B5 67.1 2.9 0.0001 40.2 2.9 44 12-56 44-87 (275)
39 3s2u_A UDP-N-acetylglucosamine 48.7 15 0.00053 36.8 4.7 25 240-264 3-29 (365)
40 2cnd_A NADH-dependent nitrate 44.5 9.4 0.00032 36.4 2.2 44 12-56 40-83 (270)
No 1
>3a1f_A Cytochrome B-245 heavy chain; GP91(PHOX), NADPH binding domain, oxidoreductase; 2.00A {Homo sapiens}
Probab=99.92 E-value=5.3e-25 Score=203.46 Aligned_cols=183 Identities=22% Similarity=0.451 Sum_probs=126.3
Q ss_pred EEEeCcccCCCCCccccccEEEEecCcChHHHHHHHHHHHHHhhcC-CCCCCceEEEEEeccCCchHHHHHHHHHhccCC
Q 009819 223 ASVEGPYGHEVPYHLMYENLILVAGGIGISPFLAILSDILHRINEG-KSCLPRNVLIVWAVKKSNELSLLSNFYKESICP 301 (524)
Q Consensus 223 V~VdGPYG~~~~~~~~~~~vVLIAGGiGITP~lSiL~~Ll~~~~~~-~~~~~rkV~LiW~vRs~~dl~wl~ell~ell~~ 301 (524)
|.|+||||.+..+...++++|||||||||||+++|+++++.+.+.+ .....++|+|+|++|+.+++.|+.++++++...
T Consensus 1 v~v~GP~G~~~~~~~~~~~~vlIagG~GItP~~s~l~~l~~~~~~~~~~~~~~~v~l~~~~r~~~~~~w~~~~l~~l~~~ 80 (186)
T 3a1f_A 1 IAVDGPFGTASEDVFSYEVVMLVGAGIGVTPFASILKSVWYKYCNNATNLKLKKIYFYWLCRDTHAFEWFADLLQLLESQ 80 (186)
T ss_dssp CCTTSTTSHHHHHHTTSSEEEEEEEGGGHHHHHHHHHHHHHHHHHCTTCCCCCEEEEEEEESCTTTTHHHHHHHHHHHHH
T ss_pred CeEECCCCCCccChhhCCeEEEEecCccHHHHHHHHHHHHHHHhhcccCCCCcEEEEEEEECCcchHHHHHHHHHHHHHH
Confidence 3579999999765557889999999999999999999998763211 012367899999999999999888888775321
Q ss_pred cc--cCCCceEEEEEEcCCCCCCCcccccccccccccCCCCCCCceeeeeCCCCchhhHHHHHHHHHHHHHHHHHhhhee
Q 009819 302 FF--SDKLNLETFIYVTRETEPPLEEGELHKTMSSSIYPVPSGCAMSVLVGTGNNVWSGLYVISSTVGFIILVALLNILY 379 (524)
Q Consensus 302 ~~--~~~~~l~I~IyVTr~~~~~~~~~~i~~~~~~~~~P~ps~~s~s~i~G~~s~~~~~a~ilas~~gfl~~~g~l~~~~ 379 (524)
.. ....++++++|+|+....+... .
T Consensus 81 ~~~~~~~~~~~~~~~~t~~~~~~~~~-----~------------------------------------------------ 107 (186)
T 3a1f_A 81 MQERNNAGFLSYNIYLTGWDESQANH-----F------------------------------------------------ 107 (186)
T ss_dssp HHHTTCTTSEEEEEEETTC-------------------------------------------------------------
T ss_pred HhhccCCCeEEEEEEEcCCCCCcccc-----e------------------------------------------------
Confidence 00 0123799999999854311000 0
Q ss_pred eCCCCCchhhHHHHHHHHHHhhheeeccceeeeehhhhhhhhcccccCCCCcccccccccccccccccccccCCCccccc
Q 009819 380 VNPFNIHSWWYKGLLFLACMVGGVLIFGGTVIGFWHLWERKSSARENYKDDSIEVDNAQNVGTMAHNDIRKKDTKSSTNI 459 (524)
Q Consensus 380 v~p~~~~s~~~~~~l~l~~m~~gV~v~g~~vi~~w~~~~~~~~~~~s~~~~~ie~~~p~~~~~~~~~~~~~~~L~~~~~V 459 (524)
+ + - |+.. .+.+ +++ ...+
T Consensus 108 -------------------~-----------~-~---~~~~--------~~~~------------------~g~--~~~~ 125 (186)
T 3a1f_A 108 -------------------A-----------V-H---HDEE--------KDVI------------------TGL--KQKT 125 (186)
T ss_dssp -----------------------------------------------------------------------------CCE
T ss_pred -------------------e-----------e-c---cccc--------cccC------------------CCC--cccc
Confidence 0 0 0 0000 0000 111 1467
Q ss_pred ccCCCCChHHHHHhhhcccCCceEEEEEeCChhhHHHHHHHHHhccccccCCCceEEEEEeec
Q 009819 460 LYGSRPDFKEIFGSTSKKWGHVDVGVIVCGPPSLQSSVAKEIRSHSLMRECHDPIFHFHSHSF 522 (524)
Q Consensus 460 ~~G~RPdl~~I~~~~~~~~~~~~VGVfvCGP~sL~~~Va~~c~~~n~~~~~~~~~f~fHsEsF 522 (524)
++| |||+..+++++.+.....++.||+|||.+|.++|+++|++.... ...+.+|+||+|+|
T Consensus 126 ~~g-R~~~~~~~~~~~~~~~~~~~~v~~CGP~~m~~~v~~~l~~~g~~-~~~~~~~~~~~E~F 186 (186)
T 3a1f_A 126 LYG-RPNWDNEFKTIASQHPNTRIGVFLCGPEALAETLSKQSISNSES-GPRGVHFIFNKENF 186 (186)
T ss_dssp EES-CCCHHHHHHHHHHHSTTCEEEEEEESCHHHHHHHHHHHHHTCCC-STTCCEEEEECCCC
T ss_pred ccC-CCCHHHHHHHHHHhCCCCcEEEEEeCCHHHHHHHHHHHHHhhcc-CCCCCEEEEEeccC
Confidence 787 99999999988766555689999999999999999999997652 12335799999998
No 2
>4eh1_A Flavohemoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: FAD; 2.20A {Vibrio cholerae o1 biovar el tor}
Probab=99.92 E-value=3.6e-24 Score=207.24 Aligned_cols=84 Identities=17% Similarity=0.300 Sum_probs=66.2
Q ss_pred EEEEeCcccCCCCCccccccEEEEecCcChHHHHHHHHHHHHHhhcCCCCCCceEEEEEeccCCchHHHHHHHHHhccCC
Q 009819 222 TASVEGPYGHEVPYHLMYENLILVAGGIGISPFLAILSDILHRINEGKSCLPRNVLIVWAVKKSNELSLLSNFYKESICP 301 (524)
Q Consensus 222 ~V~VdGPYG~~~~~~~~~~~vVLIAGGiGITP~lSiL~~Ll~~~~~~~~~~~rkV~LiW~vRs~~dl~wl~ell~ell~~ 301 (524)
+|.|+||||.+... ..+++++|||||+||||+++|+++++.+ + ..+ ++|+|++|+.+++.+.+++ +++..
T Consensus 98 ~v~v~gP~G~~~~~-~~~~~~vliagGtGitp~~~~l~~l~~~---~---~~~-v~l~~~~r~~~~~~~~~el-~~l~~- 167 (243)
T 4eh1_A 98 SVKLYAPAGDFFYV-ERERPVVLISAGVGATPMQAILHTLAKQ---N---KSG-VTYLYACNSAKEHTFAQET-AQLIA- 167 (243)
T ss_dssp EEEEEEEECSCCCC-CCSSCEEEEEEGGGHHHHHHHHHHHHHT---T---CCS-EEEEEEESSGGGCTTHHHH-HHHHH-
T ss_pred EEEEEccCcccCcC-CCCCCEEEEEccccHHHHHHHHHHHHHc---C---CCe-EEEEEEeCChhhhhHHHHH-HHHHH-
Confidence 68899999999876 5678999999999999999999999875 1 134 9999999999998665544 44321
Q ss_pred cccCCCceEEEEEEcCCC
Q 009819 302 FFSDKLNLETFIYVTRET 319 (524)
Q Consensus 302 ~~~~~~~l~I~IyVTr~~ 319 (524)
.. ++++++++++..
T Consensus 168 ---~~-~~~~~~~~s~~~ 181 (243)
T 4eh1_A 168 ---QQ-GWMQQVWYRDES 181 (243)
T ss_dssp ---HH-TCEEEEEESSCC
T ss_pred ---hC-CeEEEEEEccCC
Confidence 22 688888887654
No 3
>3jqq_A Ferredoxin NADP reductase; FAD, oxidoreductase; HET: FAD A2P; 2.20A {Plasmodium falciparum} PDB: 2ok8_A* 2ok7_A* 3jqr_A* 3jqp_A*
Probab=99.91 E-value=2.4e-24 Score=219.17 Aligned_cols=95 Identities=18% Similarity=0.194 Sum_probs=69.5
Q ss_pred EEEEeCcccCCCCCcc---ccccEEEEecCcChHHHHHHHHHHHHHhhc----CCCCCCceEEEEEeccCCchHHHHHHH
Q 009819 222 TASVEGPYGHEVPYHL---MYENLILVAGGIGISPFLAILSDILHRINE----GKSCLPRNVLIVWAVKKSNELSLLSNF 294 (524)
Q Consensus 222 ~V~VdGPYG~~~~~~~---~~~~vVLIAGGiGITP~lSiL~~Ll~~~~~----~~~~~~rkV~LiW~vRs~~dl~wl~el 294 (524)
+|.|+||||.|..... ..+++||||||||||||++||++++.+... ......++++|+|++|+.+++ |+.++
T Consensus 150 ~v~v~gP~G~f~l~~~~~~~~~~vvlIAgGtGIaP~~sil~~l~~~~~~~~~~~~~~~~~~v~L~~g~R~~~d~-~~~~e 228 (316)
T 3jqq_A 150 DIYLTGAHGYFNLPNDAIQKNTNFIFIATGTGISPYISFLKKLFAYDKNNLYNRNSNYTGYITIYYGVYNEDSI-LYLNE 228 (316)
T ss_dssp EEEEEEEECCCCCCTTHHHHTCCEEEEEEGGGGHHHHHHHHHHTTCCGGGTTCCCCCCCCCEEEEEEESSGGGC-TTHHH
T ss_pred EEEEEecCCceEcCCcccCCCCcEEEEeCCceechHHHHHHHHHHhccccccccccCCCCcEEEEEEecCHHHh-hcHHH
Confidence 5889999999866543 268999999999999999999998764211 001124789999999999998 55555
Q ss_pred HHhccCCcccCCCceEEEEEEcCCCC
Q 009819 295 YKESICPFFSDKLNLETFIYVTRETE 320 (524)
Q Consensus 295 l~ell~~~~~~~~~l~I~IyVTr~~~ 320 (524)
++++.+ ....++++++++|+.+.
T Consensus 229 L~~l~~---~~~~~~~~~~~~s~~~~ 251 (316)
T 3jqq_A 229 LEYFQK---MYPNNINIHYVFSYKQN 251 (316)
T ss_dssp HHHHHH---HCTTTEEEEEEEGGGCC
T ss_pred HHHHHH---hCCCcEEEEEEECCCcc
Confidence 555432 11237999999998643
No 4
>1tvc_A Methane monooxygenase component C, methane monooxygenase; FAD-binding, NADH-binding, oxidoreductase; HET: FDA; NMR {Methylococcus capsulatus} SCOP: b.43.4.2 c.25.1.2
Probab=99.90 E-value=4.1e-23 Score=201.52 Aligned_cols=86 Identities=23% Similarity=0.251 Sum_probs=66.9
Q ss_pred EEEEeCcccCCCCCccccccEEEEecCcChHHHHHHHHHHHHHhhcCCCCCCceEEEEEeccCCchHHHHHHHHHhccCC
Q 009819 222 TASVEGPYGHEVPYHLMYENLILVAGGIGISPFLAILSDILHRINEGKSCLPRNVLIVWAVKKSNELSLLSNFYKESICP 301 (524)
Q Consensus 222 ~V~VdGPYG~~~~~~~~~~~vVLIAGGiGITP~lSiL~~Ll~~~~~~~~~~~rkV~LiW~vRs~~dl~wl~ell~ell~~ 301 (524)
+|.|+||||.+......+++++|||||+||||+++|++++..+ + ...+++|+|++|+.+++.+ .++++++.
T Consensus 100 ~v~v~gP~G~~~~~~~~~~~~vliagGtGiaP~~~~l~~l~~~---~---~~~~v~l~~~~r~~~~~~~-~~el~~l~-- 170 (250)
T 1tvc_A 100 VLSVKGPLGVFGLKERGMAPRYFVAGGTGLAPVVSMVRQMQEW---T---APNETRIYFGVNTEPELFY-IDELKSLE-- 170 (250)
T ss_dssp EEEEEEEECCCSCCCCSSSCEEEEEESSTTHHHHHHHHHHHHH---T---CCSCEEEEEECSSSTTCCC-HHHHHHHH--
T ss_pred EEEEEcCccccccCccCCceEEEEEeccCHHHHHHHHHHHHhc---C---CCceEEEEEEeCCHHHhhh-HHHHHHHH--
Confidence 5889999999987654568999999999999999999999875 1 2468999999999999844 44445432
Q ss_pred cccCCCceEEEEEEcCC
Q 009819 302 FFSDKLNLETFIYVTRE 318 (524)
Q Consensus 302 ~~~~~~~l~I~IyVTr~ 318 (524)
....++++++++|+.
T Consensus 171 --~~~~~~~~~~~~s~~ 185 (250)
T 1tvc_A 171 --RSMRNLTVKACVWHP 185 (250)
T ss_dssp --HHSSSCEEEECCSSC
T ss_pred --HhCCCeEEEEEeccC
Confidence 123568888877764
No 5
>1qfj_A Protein (flavin reductase); riboflavin, ferredoxin reductase superfami oxidoreductase; 2.20A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1
Probab=99.90 E-value=6.1e-23 Score=197.57 Aligned_cols=87 Identities=24% Similarity=0.256 Sum_probs=68.0
Q ss_pred EEEEeCcccCCCCCccccccEEEEecCcChHHHHHHHHHHHHHhhcCCCCCCceEEEEEeccCCchHHHHHHHHHhccCC
Q 009819 222 TASVEGPYGHEVPYHLMYENLILVAGGIGISPFLAILSDILHRINEGKSCLPRNVLIVWAVKKSNELSLLSNFYKESICP 301 (524)
Q Consensus 222 ~V~VdGPYG~~~~~~~~~~~vVLIAGGiGITP~lSiL~~Ll~~~~~~~~~~~rkV~LiW~vRs~~dl~wl~ell~ell~~ 301 (524)
+|.|+||||.+......+++++|||||+||||+++|+++++.+ + ..++++|+|++|+.+++.+.+ +++++.
T Consensus 85 ~v~v~gP~G~~~~~~~~~~~~vliagG~GitP~~~~l~~l~~~---~---~~~~v~l~~~~r~~~~~~~~~-el~~l~-- 155 (232)
T 1qfj_A 85 QIVVDIPHGEAWLRDDEERPMILIAGGTGFSYARSILLTALAR---N---PNRDITIYWGGREEQHLYDLC-ELEALS-- 155 (232)
T ss_dssp EEEEEEEECSCCCCSCSSSCEEEEEETTCHHHHHHHHHHHHHH---C---TTCCEEEEEEESSGGGCTTHH-HHHHHH--
T ss_pred EEEEeCCccceEeCCCCCCcEEEEEecccHhHHHHHHHHHHhc---C---CCCcEEEEEeeCCHHHhhhHH-HHHHHH--
Confidence 5789999999977644578999999999999999999999875 1 246899999999999985544 444432
Q ss_pred cccCCCceEEEEEEcCCC
Q 009819 302 FFSDKLNLETFIYVTRET 319 (524)
Q Consensus 302 ~~~~~~~l~I~IyVTr~~ 319 (524)
.+..+++++.++++.+
T Consensus 156 --~~~~~~~~~~~~s~~~ 171 (232)
T 1qfj_A 156 --LKHPGLQVVPVVEQPE 171 (232)
T ss_dssp --HHCTTEEEEEEESSCC
T ss_pred --HHCCCeEEEEEEcCCC
Confidence 1335788888887653
No 6
>3vo2_A Putative uncharacterized protein; rossmann fold, oxidoreductase, FAD binding; HET: FAD; 1.39A {Zea mays} PDB: 3vo1_A* 1gaw_A* 1gaq_A* 1qg0_A* 4af6_A* 1qga_A* 1qfz_A* 1qfy_A* 4af7_A* 1sm4_A* 3mhp_A* 1fnb_A* 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 2xnc_A*
Probab=99.90 E-value=6.1e-23 Score=207.54 Aligned_cols=93 Identities=22% Similarity=0.251 Sum_probs=67.9
Q ss_pred EEEEeCcccCCCCCc-cccccEEEEecCcChHHHHHHHHHHHHHhhcCCCCCCceEEEEEeccCCchHHHHHHHHHhccC
Q 009819 222 TASVEGPYGHEVPYH-LMYENLILVAGGIGISPFLAILSDILHRINEGKSCLPRNVLIVWAVKKSNELSLLSNFYKESIC 300 (524)
Q Consensus 222 ~V~VdGPYG~~~~~~-~~~~~vVLIAGGiGITP~lSiL~~Ll~~~~~~~~~~~rkV~LiW~vRs~~dl~wl~ell~ell~ 300 (524)
+|.|+||||.++... ..+++++|||||+|||||++||++++.+.... ....++++|+|++|+.+++.|.+ +++++.+
T Consensus 140 ~v~v~gP~G~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~~~~~~-~~~~~~v~L~~g~r~~~d~~~~~-el~~l~~ 217 (310)
T 3vo2_A 140 DVKITGPVGKEMLMPKDPNATVIMLATGTGIAPFRSFLWKMFLEEHED-YKFSGLAWLFLGVPTSDSLLYKE-ELEKMKE 217 (310)
T ss_dssp EEEEEEEECSTTCCBSCTTCEEEEEEEGGGGHHHHHHHHHHHSSCCTT-CCCCSEEEEEEEESSGGGCCSHH-HHHHHHH
T ss_pred EEEEEeccCCcccCCCCCCCCEEEEeCCcchhHHHHHHHHHHHhhccc-ccCCCcEEEEEEecChhhcccHH-HHHHHHH
Confidence 588999999987543 35689999999999999999999987542111 11236899999999999885554 4454321
Q ss_pred CcccCCCceEEEEEEcCCC
Q 009819 301 PFFSDKLNLETFIYVTRET 319 (524)
Q Consensus 301 ~~~~~~~~l~I~IyVTr~~ 319 (524)
....++++++++|+.+
T Consensus 218 ---~~~~~~~v~~~~sr~~ 233 (310)
T 3vo2_A 218 ---MAPDNFRLDFAVSREQ 233 (310)
T ss_dssp ---HCTTTEEEEEEETTTC
T ss_pred ---hCCCCEEEEEEECCCC
Confidence 1123799999999864
No 7
>4fk8_A Ferredoxin--NADP reductase; ssgcid, NIH, niaid, structural genomics, national institute allergy and infectious diseases; HET: FAD; 2.10A {Burkholderia thailandensis} PDB: 4f7d_A*
Probab=99.89 E-value=3.3e-23 Score=204.49 Aligned_cols=70 Identities=21% Similarity=0.364 Sum_probs=57.1
Q ss_pred EEEEe-CcccCCCCCc-cccccEEEEecCcChHHHHHHHHHHHHHhhcCCCCCCceEEEEEeccCCchHHHHHHHHHhc
Q 009819 222 TASVE-GPYGHEVPYH-LMYENLILVAGGIGISPFLAILSDILHRINEGKSCLPRNVLIVWAVKKSNELSLLSNFYKES 298 (524)
Q Consensus 222 ~V~Vd-GPYG~~~~~~-~~~~~vVLIAGGiGITP~lSiL~~Ll~~~~~~~~~~~rkV~LiW~vRs~~dl~wl~ell~el 298 (524)
++.|+ ||||.+.... ..+++++|||||+||||+++++++++.+.. .++++|+|++|+.+++.+.+ +++++
T Consensus 103 ~v~v~~gP~G~~~~~~~~~~~~~vliagG~GitP~~~~l~~l~~~~~------~~~v~l~~~~r~~~~~~~~~-el~~l 174 (271)
T 4fk8_A 103 PVLIGKKPTGTLVADNLLPGKTLWMLSTGTGLAPFMSIIRDPDIYER------FDKVVLTHTCRLKGELAYMD-YIKHD 174 (271)
T ss_dssp EEEEESCCBCSCCGGGBCCCSEEEEEECGGGGHHHHHHTTCHHHHHH------CSEEEEEECCCSHHHHHHHH-HHHTC
T ss_pred EEEEecCCCcceecCCcCCCCeEEEEECCEEHHHHHHHHHHHHhcCC------CCCEEEEEecCCHHHHhHHH-HHHHH
Confidence 68899 9999997654 257899999999999999999999876521 45899999999999986554 44443
No 8
>4g1v_A Flavohemoglobin; three domains: globin fold, antiparallel beta-barrel, alpha/ fold, RESP., FAD, oxidoreductase; HET: HEM FAD; 2.10A {Saccharomyces cerevisiae} PDB: 4g1b_A*
Probab=99.89 E-value=1.2e-22 Score=211.86 Aligned_cols=85 Identities=18% Similarity=0.287 Sum_probs=65.8
Q ss_pred EEEEeCcccCCCCCcc----ccccEEEEecCcChHHHHHHHHHHHHHhhcCCCCCCceEEEEEeccCCchHHHHHHHHHh
Q 009819 222 TASVEGPYGHEVPYHL----MYENLILVAGGIGISPFLAILSDILHRINEGKSCLPRNVLIVWAVKKSNELSLLSNFYKE 297 (524)
Q Consensus 222 ~V~VdGPYG~~~~~~~----~~~~vVLIAGGiGITP~lSiL~~Ll~~~~~~~~~~~rkV~LiW~vRs~~dl~wl~ell~e 297 (524)
+|.|+||||.+..+.. .+++++|||||+||||+++|+++++.+ + ..++|+|+|++|+.+++.+.+ ++++
T Consensus 251 ~v~v~gP~G~f~l~~~~~~~~~~~~vlIagG~GitP~~s~l~~l~~~---~---~~~~v~l~~~~r~~~~~~~~~-el~~ 323 (399)
T 4g1v_A 251 EIKLSAPAGDFAINKELIHQNEVPLVLLSSGVGVTPLLAMLEEQVKC---N---PNRPIYWIQSSYDEKTQAFKK-HVDE 323 (399)
T ss_dssp EEEEEEEECSCCCCTTTTTCSSSCEEEEEEGGGHHHHHHHHHHHHHH---C---TTSCEEEEEEESSSTTSTTHH-HHHH
T ss_pred EEEEEecccceeeCcccccCCCCCEEEEecceeHhHHHHHHHHHHHc---C---CCCCEEEEEecCCHHHhhhHH-HHHH
Confidence 6889999999876544 478999999999999999999999875 1 246899999999999985554 4454
Q ss_pred ccCCcccCCCceEEEEEEcC
Q 009819 298 SICPFFSDKLNLETFIYVTR 317 (524)
Q Consensus 298 ll~~~~~~~~~l~I~IyVTr 317 (524)
+. ....++++++++++
T Consensus 324 l~----~~~~~~~~~~~~s~ 339 (399)
T 4g1v_A 324 LL----AECANVDKIIVHTD 339 (399)
T ss_dssp HH----TTCSSEEEEEEETT
T ss_pred HH----HhCCCcEEEEEEeC
Confidence 42 23456777776654
No 9
>3lo8_A Ferredoxin--NADP reductase; electron transport, oxidoreductase, FAD, flavoprotein; HET: FAD; 1.05A {Zea mays} PDB: 3lvb_A* 1jb9_A*
Probab=99.89 E-value=8.9e-23 Score=205.72 Aligned_cols=93 Identities=17% Similarity=0.193 Sum_probs=68.1
Q ss_pred EEEEeCcccCCCCCc--cccccEEEEecCcChHHHHHHHHHHHHHhhcCCCCCCceEEEEEeccCCchHHHHHHHHHhcc
Q 009819 222 TASVEGPYGHEVPYH--LMYENLILVAGGIGISPFLAILSDILHRINEGKSCLPRNVLIVWAVKKSNELSLLSNFYKESI 299 (524)
Q Consensus 222 ~V~VdGPYG~~~~~~--~~~~~vVLIAGGiGITP~lSiL~~Ll~~~~~~~~~~~rkV~LiW~vRs~~dl~wl~ell~ell 299 (524)
+|.|+||||.++... ..+++++|||||+|||||++||++++.+...+ ....++++|+|++|+.+++.|.++ ++++.
T Consensus 141 ~v~v~gP~G~~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~~~~~~-~~~~~~v~l~~g~r~~~d~~~~~e-l~~l~ 218 (311)
T 3lo8_A 141 KIQLTGPSGKIMLLPEEDPNATHIMIATGTGVAPFRGYLRRMFMEDVPN-YRFGGLAWLFLGVANSDSLLYDEE-FTSYL 218 (311)
T ss_dssp EEEEEEEECCTTCCCCSCTTCEEEEEEEGGGGHHHHHHHHHHHTEECTT-CCCCSEEEEEEEESSGGGCSSHHH-HHHHH
T ss_pred EEEEEeccCCcccCCCcCCCCCEEEEECCEEHHHHHHHHHHHHHhcccc-ccCCCCEEEEEecCChHHhhHHHH-HHHHH
Confidence 588999999987643 25689999999999999999999987642111 011368999999999998855544 44432
Q ss_pred CCcccCCCceEEEEEEcCCC
Q 009819 300 CPFFSDKLNLETFIYVTRET 319 (524)
Q Consensus 300 ~~~~~~~~~l~I~IyVTr~~ 319 (524)
+ ....++++++++|+.+
T Consensus 219 ~---~~~~~~~~~~~~s~~~ 235 (311)
T 3lo8_A 219 K---QYPDNFRYDKALSREQ 235 (311)
T ss_dssp H---HCTTTEEEEEEETTTC
T ss_pred H---hCCCcEEEEEEECCCC
Confidence 1 1123799999998764
No 10
>2r6h_A NADH:ubiquinone oxidoreductase, Na translocating, subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: FAD; 2.95A {Porphyromonas gingivalis}
Probab=99.89 E-value=2.7e-22 Score=199.19 Aligned_cols=87 Identities=18% Similarity=0.337 Sum_probs=67.3
Q ss_pred EEEEeCcccCCCCCccccccEEEEecCcChHHHHHHHHHHHHHhhcCCCCCCceEEEEEeccCCchHHHHHHHHHhccCC
Q 009819 222 TASVEGPYGHEVPYHLMYENLILVAGGIGISPFLAILSDILHRINEGKSCLPRNVLIVWAVKKSNELSLLSNFYKESICP 301 (524)
Q Consensus 222 ~V~VdGPYG~~~~~~~~~~~vVLIAGGiGITP~lSiL~~Ll~~~~~~~~~~~rkV~LiW~vRs~~dl~wl~ell~ell~~ 301 (524)
+|.|+||||.+... ...++++||||||||||+++||++++.+.. ..++++|+|++|+.+++.+ .++++++.
T Consensus 140 ~v~v~gP~G~f~~~-~~~~~~vliagGtGitP~~s~l~~~~~~~~-----~~~~v~l~~~~r~~~d~~~-~~el~~l~-- 210 (290)
T 2r6h_A 140 KVMMSGPYGDFHIQ-DTDAEMLYIGGGAGMAPLRAQILHLFRTLK-----TGRKVSYWYGARSKNEIFY-EEDFREIE-- 210 (290)
T ss_dssp EEEEEEEECCCCCC-SSSCEEEEEEEGGGHHHHHHHHHHHHHTSC-----CCSCEEEEEEESSGGGCCS-HHHHHHHH--
T ss_pred EEEEEecccCCcCC-CCCCeEEEEECccCHHHHHHHHHHHHHhcC-----CCCcEEEEEEcCCHHHHHH-HHHHHHHH--
Confidence 58899999999764 356899999999999999999999886421 2468999999999999854 44445432
Q ss_pred cccCCCceEEEEEEcCCC
Q 009819 302 FFSDKLNLETFIYVTRET 319 (524)
Q Consensus 302 ~~~~~~~l~I~IyVTr~~ 319 (524)
....++++++++++..
T Consensus 211 --~~~~~~~~~~~~s~~~ 226 (290)
T 2r6h_A 211 --REFPNFKFHIALSDPQ 226 (290)
T ss_dssp --HHCTTEEEEEEESSCC
T ss_pred --HhCCCeEEEEEEccCC
Confidence 1235689988888753
No 11
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=99.88 E-value=1.8e-22 Score=205.65 Aligned_cols=86 Identities=24% Similarity=0.386 Sum_probs=67.2
Q ss_pred EEEEeCcccCCCCCccccccEEEEecCcChHHHHHHHHHHHHHhhcCCCCCCceEEEEEeccCCchHHHHHHHHHhccCC
Q 009819 222 TASVEGPYGHEVPYHLMYENLILVAGGIGISPFLAILSDILHRINEGKSCLPRNVLIVWAVKKSNELSLLSNFYKESICP 301 (524)
Q Consensus 222 ~V~VdGPYG~~~~~~~~~~~vVLIAGGiGITP~lSiL~~Ll~~~~~~~~~~~rkV~LiW~vRs~~dl~wl~ell~ell~~ 301 (524)
+|.|+||||.+..... .++++|||||+||||+++|++++..+ + ..++++|+|++|+.+++.+. ++++++.
T Consensus 194 ~v~v~gP~G~f~~~~~-~~~~vliagGtGiaP~~s~l~~l~~~---~---~~~~v~l~~~~r~~~d~~~~-~el~~l~-- 263 (338)
T 1krh_A 194 KMSFTGPFGSFYLRDV-KRPVLMLAGGTGIAPFLSMLQVLEQK---G---SEHPVRLVFGVTQDCDLVAL-EQLDALQ-- 263 (338)
T ss_dssp EEEEEEEECSCSCCCC-SSCEEEEEEGGGHHHHHHHHHHHHHH---C---CSSCEEEEEEESSGGGCCCH-HHHHHHH--
T ss_pred EEEEECCccceEeCCC-CceEEEEEccccHhHHHHHHHHHHHc---C---CCCeEEEEEEeCCHHHhhhH-HHHHHHH--
Confidence 5889999999976543 48899999999999999999999875 1 24689999999999998544 4444432
Q ss_pred cccCCCceEEEEEEcCCC
Q 009819 302 FFSDKLNLETFIYVTRET 319 (524)
Q Consensus 302 ~~~~~~~l~I~IyVTr~~ 319 (524)
....++++++++++.+
T Consensus 264 --~~~~~~~~~~~~s~~~ 279 (338)
T 1krh_A 264 --QKLPWFEYRTVVAHAE 279 (338)
T ss_dssp --HHCTTEEEEEEETTCC
T ss_pred --HhCCCeEEEEEEecCC
Confidence 1345799999988754
No 12
>1fdr_A Flavodoxin reductase; ferredoxin reductase, flavin, oxidoreductase, flavoprotein; HET: FAD; 1.70A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1 PDB: 2xnj_A* 3fpk_A*
Probab=99.88 E-value=8.5e-22 Score=191.41 Aligned_cols=88 Identities=27% Similarity=0.271 Sum_probs=65.4
Q ss_pred EEEEe-CcccCCCCCcc-ccccEEEEecCcChHHHHHHHHHHHHHhhcCCCCCCceEEEEEeccCCchHHHHHHHHHhcc
Q 009819 222 TASVE-GPYGHEVPYHL-MYENLILVAGGIGISPFLAILSDILHRINEGKSCLPRNVLIVWAVKKSNELSLLSNFYKESI 299 (524)
Q Consensus 222 ~V~Vd-GPYG~~~~~~~-~~~~vVLIAGGiGITP~lSiL~~Ll~~~~~~~~~~~rkV~LiW~vRs~~dl~wl~ell~ell 299 (524)
+|.|+ ||||.+..... .+++++|||||+||||+++|++++..+ + ..++++|+|++|+.+++.+. ++++++.
T Consensus 87 ~v~v~~gP~G~f~l~~~~~~~~~vliagG~GitP~~~~l~~l~~~---~---~~~~v~l~~~~r~~~~~~~~-~el~~l~ 159 (248)
T 1fdr_A 87 EVQVVSEAAGFFVLDEVPHCETLWMLATGTAIGPYLSILRLGKDL---D---RFKNLVLVHAARYAADLSYL-PLMQELE 159 (248)
T ss_dssp EEEEESSCBCCCSGGGSCCCSEEEEEEEGGGGHHHHHHHHHCCSC---T---TCSEEEEEEEESSGGGCTTH-HHHHHHH
T ss_pred EEEEecCCcceeEcCCCCCCceEEEEEecccHHHHHHHHHHHHhh---C---CCCcEEEEEEcCCHHHhhHH-HHHHHHH
Confidence 57788 99999765433 368999999999999999999987542 1 24689999999999998544 4444432
Q ss_pred CCcccCCCceEEEEEEcCCC
Q 009819 300 CPFFSDKLNLETFIYVTRET 319 (524)
Q Consensus 300 ~~~~~~~~~l~I~IyVTr~~ 319 (524)
+ ....++++++++|+++
T Consensus 160 ~---~~~~~~~~~~~~s~~~ 176 (248)
T 1fdr_A 160 K---RYEGKLRIQTVVSRET 176 (248)
T ss_dssp H---HTTTSEEEEEEESSSC
T ss_pred H---hCcCcEEEEEEEecCC
Confidence 1 1124788888888754
No 13
>1cqx_A Flavohemoprotein; globin fold, six-stranded antiparallel beta sheet, helix-FLA five-stranded parallel beta sheet, lipid binding protein; HET: HEM FAD DGG; 1.75A {Cupriavidus necator} SCOP: a.1.1.2 b.43.4.2 c.25.1.5 PDB: 3ozu_A* 3ozv_B* 3ozw_A*
Probab=99.87 E-value=1.5e-21 Score=203.42 Aligned_cols=86 Identities=22% Similarity=0.441 Sum_probs=67.0
Q ss_pred EEEEeCcccCCCCCccccccEEEEecCcChHHHHHHHHHHHHHhhcCCCCCCceEEEEEeccCCchHHHHHHHHHhccCC
Q 009819 222 TASVEGPYGHEVPYHLMYENLILVAGGIGISPFLAILSDILHRINEGKSCLPRNVLIVWAVKKSNELSLLSNFYKESICP 301 (524)
Q Consensus 222 ~V~VdGPYG~~~~~~~~~~~vVLIAGGiGITP~lSiL~~Ll~~~~~~~~~~~rkV~LiW~vRs~~dl~wl~ell~ell~~ 301 (524)
+|.|.||+|.+..+....++++|||||+||||+++||++++. . ..++++|+|++|+.+++.+ .++++++.
T Consensus 249 ~v~v~gP~G~f~l~~~~~~~~vlIagGtGitP~~s~l~~l~~--~-----~~~~v~l~~~~r~~~~~~~-~~el~~l~-- 318 (403)
T 1cqx_A 249 QVKLAAPYGSFHIDVDAKTPIVLISGGVGLTPMVSMLKVALQ--A-----PPRQVVFVHGARNSAVHAM-RDRLREAA-- 318 (403)
T ss_dssp EEEECCCBCSCSCCTTCCSCEEEEESSCCHHHHHHHHHHHTC--S-----SCCCEEEEEEESCSSSCHH-HHHHHHHH--
T ss_pred EEEEecCccCcccCCCCCCCEEEEEecccHhhHHHHHHHHHh--C-----CCCcEEEEEEeCChhhCcH-HHHHHHHH--
Confidence 688999999886643456889999999999999999999864 1 2468999999999999855 45555542
Q ss_pred cccCCCceEEEEEEcCCC
Q 009819 302 FFSDKLNLETFIYVTRET 319 (524)
Q Consensus 302 ~~~~~~~l~I~IyVTr~~ 319 (524)
.+..++++++++++..
T Consensus 319 --~~~~~~~~~~~~s~~~ 334 (403)
T 1cqx_A 319 --KTYENLDLFVFYDQPL 334 (403)
T ss_dssp --HHCTTEEEEEEESSCC
T ss_pred --HhCCCcEEEEEECCCC
Confidence 2345689988888654
No 14
>2bmw_A Ferredoxin--NADP reductase; oxidoreductase, flavoprotein, FAD, FNR, reductase reductase, phycobilisome, thylakoid; HET: FAD; 1.5A {Anabaena SP} SCOP: b.43.4.2 c.25.1.1 PDB: 1h42_A* 2vyq_A* 2vzl_A* 1ogi_A* 1ogj_A* 1gjr_A* 1e62_A* 1e64_A* 1quf_A* 1e63_A* 1go2_A* 1w34_A* 1b2r_A* 1w35_A* 1w87_A* 1que_A* 1ewy_A* 1gr1_A* 2bsa_A* 1bqe_A* ...
Probab=99.87 E-value=1.7e-21 Score=195.49 Aligned_cols=93 Identities=20% Similarity=0.286 Sum_probs=66.6
Q ss_pred EEEEeCcccCCCCCc-cccccEEEEecCcChHHHHHHHHHHHHHhhc--CC-CCCCceEEEEEeccCCchHHHHHHHHHh
Q 009819 222 TASVEGPYGHEVPYH-LMYENLILVAGGIGISPFLAILSDILHRINE--GK-SCLPRNVLIVWAVKKSNELSLLSNFYKE 297 (524)
Q Consensus 222 ~V~VdGPYG~~~~~~-~~~~~vVLIAGGiGITP~lSiL~~Ll~~~~~--~~-~~~~rkV~LiW~vRs~~dl~wl~ell~e 297 (524)
+|.|+||||.++... ...++++|||||+||||++++|++++.+.+. +. .....+++|+|++|+.+++.+ .+++++
T Consensus 130 ~v~v~gP~G~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~~~~~~~~~~~~~~~~v~l~~g~r~~~d~~~-~~el~~ 208 (304)
T 2bmw_A 130 EVKITGPVGKEMLLPDDPEANVIMLAGGTGITPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTPNILY-KEELEE 208 (304)
T ss_dssp EEEEEEEECSSSCCCSCTTCEEEEEEEGGGHHHHHHHHHHHHCHHHHHHCTTCCCCSCEEEEEEESSGGGCTT-HHHHHH
T ss_pred EEEEEeccCCceeCCCCCCCCEEEEecCccHHHHHHHHHHHHHhhhhhcccccccCCCEEEEEEeCChHhcch-HHHHHH
Confidence 588999999986432 2467899999999999999999998764211 00 001357999999999998854 444555
Q ss_pred ccCCcccCC-CceEEEEEEcCCC
Q 009819 298 SICPFFSDK-LNLETFIYVTRET 319 (524)
Q Consensus 298 ll~~~~~~~-~~l~I~IyVTr~~ 319 (524)
+.+ .. .+++++++++++.
T Consensus 209 ~~~----~~~~~~~~~~~~s~~~ 227 (304)
T 2bmw_A 209 IQQ----KYPDNFRLTYAISREQ 227 (304)
T ss_dssp HHH----HCTTTEEEEEEETTTC
T ss_pred HHH----hCCCcEEEEEEEcCCC
Confidence 321 22 3688988888754
No 15
>1gvh_A Flavohemoprotein; oxidoreductase, NADP, heme, flavoprotein, FAD, iron transpor; HET: FAD HEM; 2.19A {Escherichia coli} SCOP: a.1.1.2 b.43.4.2 c.25.1.5
Probab=99.87 E-value=1.1e-21 Score=204.17 Aligned_cols=87 Identities=16% Similarity=0.216 Sum_probs=68.0
Q ss_pred EEEEeCcccCCCCCccccccEEEEecCcChHHHHHHHHHHHHHhhcCCCCCCceEEEEEeccCCchHHHHHHHHHhccCC
Q 009819 222 TASVEGPYGHEVPYHLMYENLILVAGGIGISPFLAILSDILHRINEGKSCLPRNVLIVWAVKKSNELSLLSNFYKESICP 301 (524)
Q Consensus 222 ~V~VdGPYG~~~~~~~~~~~vVLIAGGiGITP~lSiL~~Ll~~~~~~~~~~~rkV~LiW~vRs~~dl~wl~ell~ell~~ 301 (524)
+|.|+||||.+..+....++++|||||+||||+++|+++++.+ + ..++++|+|++|+.+++.+ .++++++.
T Consensus 242 ~v~v~gP~G~f~l~~~~~~~~vlIagGtGitP~~s~l~~l~~~---~---~~~~v~l~~~~r~~~~~~~-~~el~~l~-- 312 (396)
T 1gvh_A 242 VVKLVAPAGDFFMAVADDTPVTLISAGVGQTPMLAMLDTLAKA---G---HTAQVNWFHAAENGDVHAF-ADEVKELG-- 312 (396)
T ss_dssp EEEEEEEECSCCCCCCTTCCEEEEEEGGGGHHHHHHHHHHHHH---T---CCSCEEEEEEESCTTTCCS-HHHHHHHH--
T ss_pred EEEEEcCCcceECCCCCCCCEEEEecchhHhHHHHHHHHHHhc---C---CCCcEEEEEEeCCHHHhhh-HHHHHHHH--
Confidence 5889999998865434568899999999999999999999875 1 2468999999999999855 44445432
Q ss_pred cccCCCceEEEEEEcCCC
Q 009819 302 FFSDKLNLETFIYVTRET 319 (524)
Q Consensus 302 ~~~~~~~l~I~IyVTr~~ 319 (524)
.+..++++++++++..
T Consensus 313 --~~~~~~~~~~~~s~~~ 328 (396)
T 1gvh_A 313 --QSLPRFTAHTWYRQPS 328 (396)
T ss_dssp --HTSSSEEEEEEESSCC
T ss_pred --HHCCCeEEEEEECCCC
Confidence 2345789988887653
No 16
>1fnb_A Ferredoxin-NADP+ reductase; oxidoreductase (NADP+(A),ferredoxin(A)); HET: FAD; 1.70A {Spinacia oleracea} SCOP: b.43.4.2 c.25.1.1 PDB: 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 1qg0_A* 1qga_A* 1qfz_A* 1qfy_A* 1gaw_A* 1gaq_A* 3mhp_A* 1sm4_A* 2xnc_A*
Probab=99.87 E-value=3.2e-21 Score=194.87 Aligned_cols=93 Identities=19% Similarity=0.262 Sum_probs=66.4
Q ss_pred EEEEeCcccCCCCCc-cccccEEEEecCcChHHHHHHHHHHHHHhhcCCCCCCceEEEEEeccCCchHHHHHHHHHhccC
Q 009819 222 TASVEGPYGHEVPYH-LMYENLILVAGGIGISPFLAILSDILHRINEGKSCLPRNVLIVWAVKKSNELSLLSNFYKESIC 300 (524)
Q Consensus 222 ~V~VdGPYG~~~~~~-~~~~~vVLIAGGiGITP~lSiL~~Ll~~~~~~~~~~~rkV~LiW~vRs~~dl~wl~ell~ell~ 300 (524)
+|.|+||||.++... ...++++|||||||||||++||++++.+...+ .....+++|+|++|+.+++.+.+ +++++.+
T Consensus 144 ~v~v~gP~G~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~~~~~~-~~~~~~v~L~~g~R~~~d~~~~~-el~~l~~ 221 (314)
T 1fnb_A 144 EVKLTGPVGKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKHDD-YKFNGLAWLFLGVPTSSSLLYKE-EFEKMKE 221 (314)
T ss_dssp EEEEEEEECSTTCCBSCTTCEEEEEEEGGGGHHHHHHHHHHHTCCBTT-BCCCSEEEEEEEESSGGGCCSHH-HHHHHHH
T ss_pred EEEEEeccCCceeCCCCCCCCEEEEeCCccHHHHHHHHHHHHHhcccc-ccCCCCEEEEEecCCHHHhhhHH-HHHHHHH
Confidence 588999999986432 24678999999999999999999987541110 01146899999999999885544 4454321
Q ss_pred CcccCCCceEEEEEEcCCC
Q 009819 301 PFFSDKLNLETFIYVTRET 319 (524)
Q Consensus 301 ~~~~~~~~l~I~IyVTr~~ 319 (524)
....++++++++++++
T Consensus 222 ---~~~~~~~~~~~~s~~~ 237 (314)
T 1fnb_A 222 ---KAPDNFRLDFAVSREQ 237 (314)
T ss_dssp ---HCTTTEEEEEEETTTC
T ss_pred ---hCCCcEEEEEEECCCC
Confidence 1123688888888754
No 17
>2pia_A Phthalate dioxygenase reductase; HET: FMN; 2.00A {Burkholderia cepacia} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=99.86 E-value=5.9e-21 Score=194.10 Aligned_cols=67 Identities=22% Similarity=0.389 Sum_probs=55.3
Q ss_pred EEEEeCcccCCCCCccccccEEEEecCcChHHHHHHHHHHHHHhhcCCCCCCceEEEEEeccCCchHHHHHHHHHh
Q 009819 222 TASVEGPYGHEVPYHLMYENLILVAGGIGISPFLAILSDILHRINEGKSCLPRNVLIVWAVKKSNELSLLSNFYKE 297 (524)
Q Consensus 222 ~V~VdGPYG~~~~~~~~~~~vVLIAGGiGITP~lSiL~~Ll~~~~~~~~~~~rkV~LiW~vRs~~dl~wl~ell~e 297 (524)
+|.|+||||.|.... .+++++||||||||||+++|++++..+ + .++++|+|++|+.+++.|.++ +++
T Consensus 95 ~v~v~gP~g~f~l~~-~~~~~vliagG~GItP~~s~l~~l~~~---~----~~~v~l~~~~r~~~~~~~~~e-l~~ 161 (321)
T 2pia_A 95 AVEVSLPRNEFPLDK-RAKSFILVAGGIGITPMLSMARQLRAE---G----LRSFRLYYLTRDPEGTAFFDE-LTS 161 (321)
T ss_dssp EEEECCCBCCSCCCT-TCSEEEEEEEGGGHHHHHHHHHHHHHH---C----SSEEEEEEEESCGGGCTTHHH-HHS
T ss_pred EEEEeCCccccccCC-CCCCEEEEEecccHhHHHHHHHHHHHc---C----CCcEEEEEEECChhhhHHHHH-Hhc
Confidence 688999999986653 468999999999999999999999875 1 168999999999999865544 444
No 18
>2bgi_A Ferredoxin-NADP(H) reductase; ferredoxin(flavodoxin)-NADP(H) reductase, flavoproteins, electron transfer, oxidoreductase; HET: FAD HTG; 1.68A {Rhodobacter capsulatus} PDB: 2bgj_A* 2vnh_A* 2vni_A* 2vnj_A* 2vnk_A*
Probab=99.86 E-value=1.4e-20 Score=186.49 Aligned_cols=90 Identities=22% Similarity=0.259 Sum_probs=65.3
Q ss_pred EEEEe-CcccCCCCCcc-ccccEEEEecCcChHHHHHHHHHHHHHhhcCCCCCCceEEEEEeccCCchHHHHHHHHH-hc
Q 009819 222 TASVE-GPYGHEVPYHL-MYENLILVAGGIGISPFLAILSDILHRINEGKSCLPRNVLIVWAVKKSNELSLLSNFYK-ES 298 (524)
Q Consensus 222 ~V~Vd-GPYG~~~~~~~-~~~~vVLIAGGiGITP~lSiL~~Ll~~~~~~~~~~~rkV~LiW~vRs~~dl~wl~ell~-el 298 (524)
+|.|+ ||||.+..... .+++++|||||+||||+++|++++..+ + ..++++|+|++|+.+++.+.+ +++ ++
T Consensus 101 ~v~v~~gP~G~f~~~~~~~~~~~vliagG~GiaP~~~~l~~l~~~---~---~~~~v~l~~~~r~~~~~~~~~-el~~~l 173 (272)
T 2bgi_A 101 QIILRPKPVGTLVIDALLPGKRLWFLATGTGIAPFASLMREPEAY---E---KFDEVIMMHACRTVAELEYGR-QLVEAL 173 (272)
T ss_dssp EEEEEEEEECSCCGGGBCCCSEEEEEEEGGGGHHHHHHTTCGGGG---T---SCSEEEEEEEESSSGGGHHHH-HHHHHH
T ss_pred EEEEeeCCCCcccccccccCCeEEEEeecccHHHHHHHHHHHHhc---C---CCCcEEEEEEeCCHHHhhHHH-HHHHHH
Confidence 57788 99999865543 268999999999999999999987653 1 246899999999999986554 444 43
Q ss_pred cC-CcccC--CCceEEEEEEcCC
Q 009819 299 IC-PFFSD--KLNLETFIYVTRE 318 (524)
Q Consensus 299 l~-~~~~~--~~~l~I~IyVTr~ 318 (524)
.+ ..... ..+++++.++|++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~s~~ 196 (272)
T 2bgi_A 174 QEDPLIGELVEGKLKYYPTTTRE 196 (272)
T ss_dssp HHCTTTTTTSTTTEEEEEEESSS
T ss_pred HhcchhhcccCCcEEEEEEecCC
Confidence 21 00001 2578888888865
No 19
>2b5o_A FNR, ferredoxin--NADP reductase; complex with FAD, oxidoreductase; HET: FAD; 2.50A {Synechococcus SP}
Probab=99.85 E-value=5.9e-21 Score=200.66 Aligned_cols=92 Identities=18% Similarity=0.339 Sum_probs=66.4
Q ss_pred EEEEeCcccCCCCCc-cccccEEEEecCcChHHHHHHHHHHHHHhhcCCCCCCceEEEEEeccCCchHHHHHHHHHhccC
Q 009819 222 TASVEGPYGHEVPYH-LMYENLILVAGGIGISPFLAILSDILHRINEGKSCLPRNVLIVWAVKKSNELSLLSNFYKESIC 300 (524)
Q Consensus 222 ~V~VdGPYG~~~~~~-~~~~~vVLIAGGiGITP~lSiL~~Ll~~~~~~~~~~~rkV~LiW~vRs~~dl~wl~ell~ell~ 300 (524)
+|.|+||||.++... ...++++|||||+|||||++||++++.+.... .....+++|+|++|+.+++.+. ++++++.+
T Consensus 232 ~v~v~gP~G~~~~l~~~~~~~vvlIAgGtGIaP~~s~l~~l~~~~~~~-~~~~~~v~L~~g~R~~~d~~~~-~eL~~l~~ 309 (402)
T 2b5o_A 232 DVKITGPVGKEMLLPDDEDATVVMLATGTGIAPFRAFLWRMFKEQHED-YKFKGKAWLIFGVPYTANILYK-DDFEKMAA 309 (402)
T ss_dssp CEEEEEEECSTTCCCSCTTCEEEEEEEGGGGHHHHHHHHHHHTCCCSS-CCCCSEEEEEEEESSGGGCTTH-HHHHHHHH
T ss_pred eEEEEcccCCcccCCccCCCCEEEEEcccCHHHHHHHHHHHHHhcccc-ccccCCEEEEEecCCHHHhHHH-HHHHHHHH
Confidence 478999999986432 34678999999999999999999987641110 0124689999999999988554 44555321
Q ss_pred CcccCC-CceEEEEEEcCCC
Q 009819 301 PFFSDK-LNLETFIYVTRET 319 (524)
Q Consensus 301 ~~~~~~-~~l~I~IyVTr~~ 319 (524)
.. .++++++++++++
T Consensus 310 ----~~~~~~~v~~~~S~~~ 325 (402)
T 2b5o_A 310 ----ENPDNFRLTYAISREQ 325 (402)
T ss_dssp ----HCTTTEEEEEEETTTC
T ss_pred ----hCCCcEEEEEEECCCC
Confidence 22 3689988888753
No 20
>2qdx_A Ferredoxin reductase; oxidoreductase; HET: FAD; 1.55A {Pseudomonas aeruginosa} PDB: 3crz_A* 1a8p_A*
Probab=99.85 E-value=1.4e-20 Score=184.20 Aligned_cols=90 Identities=29% Similarity=0.341 Sum_probs=64.8
Q ss_pred EEEEe-CcccCCCCCcc-ccccEEEEecCcChHHHHHHHHHHHHHhhcCCCCCCceEEEEEeccCCchHHHHHHHHH-hc
Q 009819 222 TASVE-GPYGHEVPYHL-MYENLILVAGGIGISPFLAILSDILHRINEGKSCLPRNVLIVWAVKKSNELSLLSNFYK-ES 298 (524)
Q Consensus 222 ~V~Vd-GPYG~~~~~~~-~~~~vVLIAGGiGITP~lSiL~~Ll~~~~~~~~~~~rkV~LiW~vRs~~dl~wl~ell~-el 298 (524)
+|.|. ||||.+..... .+++++|||||+||||+++|++++..+.. .++++|+|++|+.+++.+.+ +++ ++
T Consensus 87 ~v~v~~gp~G~f~~~~~~~~~~~vliagG~GitP~~~~l~~l~~~~~------~~~v~l~~~~r~~~~~~~~~-el~~~l 159 (257)
T 2qdx_A 87 ELMVSRKPTGTLVHDDLLPGKHLYLLSTGTGMAPFLSVIQDPETYER------YEKVILVHGVRWVSELAYAD-FITKVL 159 (257)
T ss_dssp EEEECSCCBCSCCGGGBCSCSEEEEEEEGGGGHHHHHHTTCHHHHHH------CSEEEEEEEESSGGGCTTHH-HHHTTG
T ss_pred EEEEecCCCCCccCCcccCCCeEEEEEeceEHHHHHHHHHHHHhcCC------CCeEEEEEEcCCHHHhHhHH-HHHHHH
Confidence 57788 99999865433 36899999999999999999999876421 35899999999999985544 444 43
Q ss_pred cCCccc-C--CCceEEEEEEcCC
Q 009819 299 ICPFFS-D--KLNLETFIYVTRE 318 (524)
Q Consensus 299 l~~~~~-~--~~~l~I~IyVTr~ 318 (524)
.+.... + ..+++++.++|++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~s~~ 182 (257)
T 2qdx_A 160 PEHEYFGDQVKEKLIYYPLVTRE 182 (257)
T ss_dssp GGCTTTHHHHHHHEEEEEEESSS
T ss_pred HhchhhhccCCCcEEEEEEecCC
Confidence 210000 1 1467888888765
No 21
>2rc5_A Ferredoxin-NADP reductase; FAD, oxidoreductase; HET: FAD; 2.43A {Leptospira interrogans} PDB: 2rc6_A*
Probab=99.85 E-value=9.8e-21 Score=191.03 Aligned_cols=90 Identities=21% Similarity=0.419 Sum_probs=66.5
Q ss_pred EEEEeCcccCCCCCc--cccccEEEEecCcChHHHHHHHHHHHHHhhcCCCCCCceEEEEEeccCCchHHHHHHHHHhcc
Q 009819 222 TASVEGPYGHEVPYH--LMYENLILVAGGIGISPFLAILSDILHRINEGKSCLPRNVLIVWAVKKSNELSLLSNFYKESI 299 (524)
Q Consensus 222 ~V~VdGPYG~~~~~~--~~~~~vVLIAGGiGITP~lSiL~~Ll~~~~~~~~~~~rkV~LiW~vRs~~dl~wl~ell~ell 299 (524)
+|.|+||||.++... ...+++||||||+||||+++|+++++.+.. .....+++|+|++|+.+++.+ .++++++.
T Consensus 146 ~v~v~gP~G~~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~l~~~~~---~~~~~~v~l~~g~r~~~d~~~-~~el~~l~ 221 (314)
T 2rc5_A 146 EVTMTGPSGKKFLLPNTDFSGDIMFLATGTGIAPFIGMSEELLEHKL---IKFTGNITLVYGAPYSDELVM-MDYLKGLE 221 (314)
T ss_dssp EEEEEEEECSSSCCCSSCBCSCEEEEEEGGGGHHHHHHHHHHHTTCS---SCBCSCEEEEEEESSGGGSCS-HHHHHHHH
T ss_pred EEEEEeccCCceeCCCCCCCCCEEEEECCccHHHHHHHHHHHHHhcc---cCCCCcEEEEEEeCCHHHHhH-HHHHHHHH
Confidence 588999999986533 246899999999999999999999875411 012357999999999998754 44455532
Q ss_pred CCcccCCCceEEEEEEcCCC
Q 009819 300 CPFFSDKLNLETFIYVTRET 319 (524)
Q Consensus 300 ~~~~~~~~~l~I~IyVTr~~ 319 (524)
. ...++++++++|++.
T Consensus 222 ~----~~~~~~~~~~~s~~~ 237 (314)
T 2rc5_A 222 S----KHKNFKLITAISREE 237 (314)
T ss_dssp H----HHSSEEEEEEETTTC
T ss_pred H----hCCcEEEEEEECCCC
Confidence 1 224788988888754
No 22
>2eix_A NADH-cytochrome B5 reductase; flavoprotein, FAD-binding domain, NADH-binding, oxidoreducta; HET: FAD; 1.56A {Physarum polycephalum}
Probab=99.85 E-value=4.5e-21 Score=185.74 Aligned_cols=123 Identities=17% Similarity=0.222 Sum_probs=84.9
Q ss_pred EEEEeCcccCCCCCccccccEEEEecCcChHHHHHHHHHHHHHhhcCCCCCCceEEEEEeccCCchHHHHHHHHHhccCC
Q 009819 222 TASVEGPYGHEVPYHLMYENLILVAGGIGISPFLAILSDILHRINEGKSCLPRNVLIVWAVKKSNELSLLSNFYKESICP 301 (524)
Q Consensus 222 ~V~VdGPYG~~~~~~~~~~~vVLIAGGiGITP~lSiL~~Ll~~~~~~~~~~~rkV~LiW~vRs~~dl~wl~ell~ell~~ 301 (524)
+|.|+||||.+......+++++|||||+||||+++|+++++.+. ...++++|+|++|+.+++.+ .++++++.
T Consensus 99 ~v~v~gP~G~f~~~~~~~~~~vliagG~GiaP~~~~l~~l~~~~-----~~~~~v~l~~~~r~~~~~~~-~~el~~l~-- 170 (243)
T 2eix_A 99 FLQVRGPKGQFDYKPNMVKEMGMIAGGTGITPMLQVARAIIKNP-----KEKTIINLIFANVNEDDILL-RTELDDMA-- 170 (243)
T ss_dssp EEEEEEEECSCCCCTTSSSEEEEEEEGGGHHHHHHHHHHHHTCT-----TCCCEEEEEEEEEEGGGCTT-HHHHHHHH--
T ss_pred EEEEECCeEEEEeCCCCCcEEEEEecCccHHHHHHHHHHHHhCC-----CCCcEEEEEEEcCCHHHhhH-HHHHHHHH--
Confidence 58899999998665445689999999999999999999987531 12568999999999999854 44455432
Q ss_pred cccCCCceEEEEEEcCCCC-CCCcccccccccccccCCCCCCCceeeeeCCCCc
Q 009819 302 FFSDKLNLETFIYVTRETE-PPLEEGELHKTMSSSIYPVPSGCAMSVLVGTGNN 354 (524)
Q Consensus 302 ~~~~~~~l~I~IyVTr~~~-~~~~~~~i~~~~~~~~~P~ps~~s~s~i~G~~s~ 354 (524)
....++++++++++..+ +....+.++.+++....+.+.+....++||+..+
T Consensus 171 --~~~~~~~~~~~~s~~~~~~~g~~g~v~~~~l~~~~~~~~~~~~vy~CGp~~m 222 (243)
T 2eix_A 171 --KKYSNFKVYYVLNNPPAGWTGGVGFVSADMIKQHFSPPSSDIKVMMCGPPMM 222 (243)
T ss_dssp --HHCTTEEEEEEEEECCTTCCSEESSCCHHHHHHHSCCTTSSEEEEEESSHHH
T ss_pred --HHCCCeEEEEEeCCCCccccCcCCccCHHHHHHhcCCCCCCeEEEEECCHHH
Confidence 12347899998887532 2223344443333333333334556889999763
No 23
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B*
Probab=99.83 E-value=1.1e-19 Score=179.07 Aligned_cols=67 Identities=18% Similarity=0.368 Sum_probs=54.2
Q ss_pred EEEEeCcccC-CCCCcc-ccccEEEEecCcChHHHHHHHHHHHHHhhcCCCCCCceEEEEEeccCCchHHHHHHHHHh
Q 009819 222 TASVEGPYGH-EVPYHL-MYENLILVAGGIGISPFLAILSDILHRINEGKSCLPRNVLIVWAVKKSNELSLLSNFYKE 297 (524)
Q Consensus 222 ~V~VdGPYG~-~~~~~~-~~~~vVLIAGGiGITP~lSiL~~Ll~~~~~~~~~~~rkV~LiW~vRs~~dl~wl~ell~e 297 (524)
+|.|+||||. |..... ..++++||||||||||+++|++++..+ .++++|+|++|+.+++.+.+ ++++
T Consensus 91 ~v~v~gP~G~~f~l~~~~~~~~~lliagGtGitP~~s~l~~l~~~--------~~~v~l~~~~r~~~~~~~~~-el~~ 159 (262)
T 1ep3_B 91 KVDVMGPLGNGFPVAEVTSTDKILIIGGGIGVPPLYELAKQLEKT--------GCQMTILLGFASENVKILEN-EFSN 159 (262)
T ss_dssp EEEEEEEESBCCCCTTCCTTSEEEEEEEGGGSHHHHHHHHHHHHH--------TCEEEEEEEESSGGGCCCHH-HHHT
T ss_pred EEEEEcccCCCccCCCccCCCeEEEEECcCcHHHHHHHHHHHHHc--------CCeEEEEEEcCCHHHhhhHH-HHhh
Confidence 5889999999 644332 368999999999999999999999875 25899999999999985544 4444
No 24
>2cnd_A NADH-dependent nitrate reductase; nitrate assimilating enzyme, oxidoreductase, nitrogenous acceptor; HET: FAD; 2.50A {Zea mays} SCOP: b.43.4.2 c.25.1.1 PDB: 1cnf_A* 1cne_A*
Probab=99.80 E-value=2.3e-19 Score=176.42 Aligned_cols=126 Identities=16% Similarity=0.222 Sum_probs=80.9
Q ss_pred EEEEeCcccCCC--------CCc--cccccEEEEecCcChHHHHHHHHHHHHHhhcCCCCCCceEEEEEeccCCchHHHH
Q 009819 222 TASVEGPYGHEV--------PYH--LMYENLILVAGGIGISPFLAILSDILHRINEGKSCLPRNVLIVWAVKKSNELSLL 291 (524)
Q Consensus 222 ~V~VdGPYG~~~--------~~~--~~~~~vVLIAGGiGITP~lSiL~~Ll~~~~~~~~~~~rkV~LiW~vRs~~dl~wl 291 (524)
+|.|+||||.+. ... ...++++|||||+||||+++|+++++.+.. ...++++|+|++|+.+++.+.
T Consensus 109 ~v~v~gP~G~~~~~~~g~f~l~~~~~~~~~~vliagGtGiaP~~~~l~~l~~~~~----~~~~~v~l~~~~r~~~d~~~~ 184 (270)
T 2cnd_A 109 YIDVKGPLGHVEYTGRGSFVINGKQRNARRLAMICGGSGITPMYQIIQAVLRDQP----EDHTEMHLVYANRTEDDILLR 184 (270)
T ss_dssp EEEEEEEECSEECCSSSCEEETTEEECCSEEEEEEEGGGHHHHHHHHHHHHHTTT----TCCCEEEEEEEESCGGGCTTH
T ss_pred EEEEECCcccceeccccceeccCCcccCCEEEEEeccccHHHHHHHHHHHHhcCC----CCCcEEEEEEEcCCHHHcchH
Confidence 588999999842 111 246789999999999999999999986411 125689999999999998554
Q ss_pred HHHHHhccCCcccCCCceEEEEEEcCCC----CCCCcccccccccccccCCCCCCCceeeeeCCCCch
Q 009819 292 SNFYKESICPFFSDKLNLETFIYVTRET----EPPLEEGELHKTMSSSIYPVPSGCAMSVLVGTGNNV 355 (524)
Q Consensus 292 ~ell~ell~~~~~~~~~l~I~IyVTr~~----~~~~~~~~i~~~~~~~~~P~ps~~s~s~i~G~~s~~ 355 (524)
+ +++++.+ ....+++++..+++.. .+....+.++..++....+...+....++||+..++
T Consensus 185 ~-el~~l~~---~~~~~~~~~~~~s~~~~~~~~~~~~~g~v~~~~l~~~l~~~~~~~~vyvCGp~~m~ 248 (270)
T 2cnd_A 185 D-ELDRWAA---EYPDRLKVWYVIDQVKRPEEGWKYSVGFVTEAVLREHVPEGGDDTLALACGPPPMI 248 (270)
T ss_dssp H-HHHHHHH---HCTTTEEEEEEESCCSCGGGCCCSEESSCCHHHHHHHSCCCSSSEEEEEECCHHHH
T ss_pred H-HHHHHHH---HCcCcEEEEEEECCCCCCCCCcccccccCCHHHHHHhcCCCcCCEEEEEECCHHHH
Confidence 4 4444321 1123688888887632 122223444433333333333334567899997643
No 25
>1umk_A B5R, NADH-cytochrome B5 reductase; flavoprotein, beta barrel, FAD-binding domain, NADH-binding domain, oxidoreductase; HET: FAD; 1.75A {Homo sapiens} SCOP: b.43.4.2 c.25.1.1 PDB: 1ndh_A* 1i7p_A* 1ib0_A* 1qx4_A*
Probab=99.80 E-value=1.7e-19 Score=178.05 Aligned_cols=125 Identities=18% Similarity=0.265 Sum_probs=81.8
Q ss_pred EEEEeCcccCCCCC----------------ccccccEEEEecCcChHHHHHHHHHHHHHhhcCCCCCCceEEEEEeccCC
Q 009819 222 TASVEGPYGHEVPY----------------HLMYENLILVAGGIGISPFLAILSDILHRINEGKSCLPRNVLIVWAVKKS 285 (524)
Q Consensus 222 ~V~VdGPYG~~~~~----------------~~~~~~vVLIAGGiGITP~lSiL~~Ll~~~~~~~~~~~rkV~LiW~vRs~ 285 (524)
+|.|+||||.+... ...+++++|||||+||||+++|+++++.+. ...++++|+|++|+.
T Consensus 113 ~v~v~gP~G~~~~~~~~~f~l~~~~~~~~~~~~~~~~vliagGtGIaP~~~~l~~l~~~~-----~~~~~v~l~~~~r~~ 187 (275)
T 1umk_A 113 TIEFRGPSGLLVYQGKGKFAIRPDKKSNPIIRTVKSVGMIAGGTGITPMLQVIRAIMKDP-----DDHTVCHLLFANQTE 187 (275)
T ss_dssp EEEEEEEECSEEEEETTEEEECSSTTSCCEEEECSEEEEEEEGGGHHHHHHHHHHHHTCT-----TCCCEEEEEEEESSG
T ss_pred EEEEEcCccceEecCCccccccccccccccccCCceEEEEecCccHhHHHHHHHHHHhCC-----CCCcEEEEEEEcCCH
Confidence 58899999997431 024678999999999999999999987531 125789999999999
Q ss_pred chHHHHHHHHHhccCCcccCCCceEEEEEEcCCCC-CCCcccccccccccccCCCCCCCceeeeeCCCCch
Q 009819 286 NELSLLSNFYKESICPFFSDKLNLETFIYVTRETE-PPLEEGELHKTMSSSIYPVPSGCAMSVLVGTGNNV 355 (524)
Q Consensus 286 ~dl~wl~ell~ell~~~~~~~~~l~I~IyVTr~~~-~~~~~~~i~~~~~~~~~P~ps~~s~s~i~G~~s~~ 355 (524)
+++.+. ++++++.+ ....+++++..+++... +....+.++..++....+.+.+....++||+..++
T Consensus 188 ~d~~~~-~el~~l~~---~~~~~~~~~~~~s~~~~~~~~~~g~v~~~~l~~~l~~~~~~~~vyvCGp~~m~ 254 (275)
T 1umk_A 188 KDILLR-PELEELRN---KHSARFKLWYTLDRAPEAWDYGQGFVNEEMIRDHLPPPEEEPLVLMCGPPPMI 254 (275)
T ss_dssp GGCTTH-HHHHHHHH---HCTTTEEEEEEESSCCSSCSSEESSCCHHHHHHHSCCGGGCCEEEEESCHHHH
T ss_pred HHhhHH-HHHHHHHH---hCcCcEEEEEEEcCCCccccCccCccCHHHHHHhcCCCCCCeEEEEECCHHHH
Confidence 998554 44454321 11125888777776532 22233444433333333333234568899997643
No 26
>1ddg_A Sulfite reductase (NADPH) flavoprotein alpha- component; cytochrome P450 reductase, FNR, modular protein, oxidoreductase; HET: FAD; 2.01A {Escherichia coli} SCOP: b.43.4.1 c.25.1.4 PDB: 1ddi_A*
Probab=99.68 E-value=4.9e-17 Score=169.75 Aligned_cols=87 Identities=11% Similarity=0.085 Sum_probs=63.2
Q ss_pred EEEEeC-cccCCCCCccccccEEEEecCcChHHHHHHHHHHHHHhhcCCCCCCceEEEEEeccCC-chHHHHHHHHHhcc
Q 009819 222 TASVEG-PYGHEVPYHLMYENLILVAGGIGISPFLAILSDILHRINEGKSCLPRNVLIVWAVKKS-NELSLLSNFYKESI 299 (524)
Q Consensus 222 ~V~VdG-PYG~~~~~~~~~~~vVLIAGGiGITP~lSiL~~Ll~~~~~~~~~~~rkV~LiW~vRs~-~dl~wl~ell~ell 299 (524)
+|.|.| |.|.|.......++++|||||+|||||++++++++... ...++.|+|++|+. +++. +.++++++.
T Consensus 209 ~v~v~~~~~g~F~lp~~~~~piimIa~GtGIAP~~s~l~~~~~~~------~~~~~~L~~G~R~~~~d~l-y~~El~~~~ 281 (374)
T 1ddg_A 209 EVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAADE------APGKNWLFFGNPHFTEDFL-YQVEWQRYV 281 (374)
T ss_dssp EEEEEEECCTTSCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHT------CCSCEEEEEEESCHHHHCT-THHHHHHHH
T ss_pred EEEEEEeeCCCccCCCCCCCCEEEEECCccHHHHHHHHHHHHhcC------CCCCEEEEEEeCCchhhhh-HHHHHHHHH
Confidence 577887 55677554334678999999999999999999987651 24579999999998 5664 455555542
Q ss_pred CCcccCCCceEEEEEEcCCC
Q 009819 300 CPFFSDKLNLETFIYVTRET 319 (524)
Q Consensus 300 ~~~~~~~~~l~I~IyVTr~~ 319 (524)
+ ....+++++.+++++
T Consensus 282 ~----~~~~~~l~~a~Srd~ 297 (374)
T 1ddg_A 282 K----EGVLTRIDLAWSRDQ 297 (374)
T ss_dssp H----TTSCCEEEEEETTSS
T ss_pred H----hCCCcEEEEEEecCC
Confidence 1 334568888888754
No 27
>4dql_A Bifunctional P-450/NADPH-P450 reductase; rossmann fold, redox, FAD and NADP+ binding, oxidoreductase; HET: FAD NAP 1PE PG4; 2.15A {Bacillus megaterium} PDB: 4dqk_A*
Probab=99.65 E-value=9.8e-16 Score=161.04 Aligned_cols=91 Identities=14% Similarity=0.182 Sum_probs=66.7
Q ss_pred eEEEEeCcccCCCCCccccccEEEEecCcChHHHHHHHHHHHHHhhcCCCCCCceEEEEEeccCC-chHHHHHHHHHhcc
Q 009819 221 ITASVEGPYGHEVPYHLMYENLILVAGGIGISPFLAILSDILHRINEGKSCLPRNVLIVWAVKKS-NELSLLSNFYKESI 299 (524)
Q Consensus 221 l~V~VdGPYG~~~~~~~~~~~vVLIAGGiGITP~lSiL~~Ll~~~~~~~~~~~rkV~LiW~vRs~-~dl~wl~ell~ell 299 (524)
+.+.|+||+|.|.......++++|||||+|||||++++++.....+.+. ...+++|+|++|+. +++ ++.++++++.
T Consensus 222 v~v~v~~P~g~F~lp~~~~~piImIg~GtGIAPf~s~l~~r~~~~~~g~--~~~~v~L~~G~R~~~~d~-ly~~el~~~~ 298 (393)
T 4dql_A 222 ITCFISTPQSEFTLPKDPETPLIMVGPGTGVAPFRGFVQARKQLKEQGQ--SLGEAHLYFGCRSPHEDY-LYQEELENAQ 298 (393)
T ss_dssp EEEEEECCSSCCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHHTTC--CCCCEEEEEEESCTTTCC-TTHHHHHHHH
T ss_pred EEEEEEcCCCCcccCccCCCCeEEEccCceechHHHHHHHHHHHHhcCC--CCCCEEEEEEECCcchhh-HHHHHHHHHH
Confidence 5788999999987655456789999999999999999998643222221 24579999999994 666 4555555542
Q ss_pred CCcccCCCceEEEEEEcCCC
Q 009819 300 CPFFSDKLNLETFIYVTRET 319 (524)
Q Consensus 300 ~~~~~~~~~l~I~IyVTr~~ 319 (524)
+...+++++.+++.+
T Consensus 299 -----~~~~l~l~~a~Sr~~ 313 (393)
T 4dql_A 299 -----SEGIITLHTAFSRMP 313 (393)
T ss_dssp -----HTTSCEEEEEESSCT
T ss_pred -----hCCCeEEEEEEeCCC
Confidence 235678888888743
No 28
>1f20_A Nitric-oxide synthase; nitric-xoide synthase, reductase domain, FAD, NADP+, oxidore; HET: FAD NAP; 1.90A {Rattus norvegicus} SCOP: b.43.4.1 c.25.1.4
Probab=99.52 E-value=7.5e-14 Score=148.39 Aligned_cols=92 Identities=16% Similarity=0.111 Sum_probs=65.2
Q ss_pred EEEEeC-cccCCCCCccccccEEEEecCcChHHHHHHHHHHHHHhhcCCCCCCceEEEEEeccCCc-hHHHHHHHHHhcc
Q 009819 222 TASVEG-PYGHEVPYHLMYENLILVAGGIGISPFLAILSDILHRINEGKSCLPRNVLIVWAVKKSN-ELSLLSNFYKESI 299 (524)
Q Consensus 222 ~V~VdG-PYG~~~~~~~~~~~vVLIAGGiGITP~lSiL~~Ll~~~~~~~~~~~rkV~LiW~vRs~~-dl~wl~ell~ell 299 (524)
+|.|.| |+|.|.......++++|||||+|||||++++++++...+.. .....+++|+|++|+.+ ++. +.++++++.
T Consensus 261 ~v~v~~~~~g~F~lp~~~~~piilIagGtGIAP~~s~l~~~~~~~~~~-~~~~~~~~L~~G~R~~~~d~l-y~~El~~~~ 338 (435)
T 1f20_A 261 VVPCFVRGAPSFHLPRNPQVPCILVGPGTGIAPFRSFWQQRQFDIQHK-GMNPCPMVLVFGCRQSKIDHI-YREETLQAK 338 (435)
T ss_dssp EEEEEEECCTTSSCCSCTTSCEEEECCGGGGHHHHHHHHHHHHHHHHH-CCCCCCEEEEEEESCTTTSCT-THHHHHHHH
T ss_pred EEEEEEecCCCccCCCCCCCCEEEEECCcCcHHHHHHHHHHHHhhhhc-cCCCCCEEEEEeecccccchh-HHHHHHHHH
Confidence 578888 67787654434578999999999999999999987642100 01246899999999997 553 455555542
Q ss_pred CCcccCCCceEEEEEEcCCC
Q 009819 300 CPFFSDKLNLETFIYVTRET 319 (524)
Q Consensus 300 ~~~~~~~~~l~I~IyVTr~~ 319 (524)
+ ....+++++.++++.
T Consensus 339 ~----~~~~~~l~~a~Sr~~ 354 (435)
T 1f20_A 339 N----KGVFRELYTAYSREP 354 (435)
T ss_dssp H----TTSEEEEEEEESSCT
T ss_pred H----cCCccEEEEEECCCC
Confidence 1 334567888888764
No 29
>2gpj_A Siderophore-interacting protein; structural genomics, joint for structural genomics, JCSG; HET: FAD; 2.20A {Shewanella putrefaciens}
Probab=99.52 E-value=1.8e-13 Score=134.49 Aligned_cols=57 Identities=11% Similarity=0.085 Sum_probs=46.5
Q ss_pred EEEEeCcccCCCCCccccccEEEEecCcChHHHHHHHHHHHHHhhcCCCCCCceEEEEEeccCCchH
Q 009819 222 TASVEGPYGHEVPYHLMYENLILVAGGIGISPFLAILSDILHRINEGKSCLPRNVLIVWAVKKSNEL 288 (524)
Q Consensus 222 ~V~VdGPYG~~~~~~~~~~~vVLIAGGiGITP~lSiL~~Ll~~~~~~~~~~~rkV~LiW~vRs~~dl 288 (524)
+|.|.||+|.|.... ..++++||||||||||+++|++++.. ..++++++.+|+.+++
T Consensus 96 ~l~v~gP~G~f~l~~-~~~~~lliagGtGitPi~s~l~~l~~---------~~~~~~~~~~~~~~d~ 152 (252)
T 2gpj_A 96 LIQIGGPGLKKLINF-EADWFLLAGDMTALPAISVNLAKLPN---------NAVGYAVIEVLSEADI 152 (252)
T ss_dssp EEEEEEEECCCCCCS-SSSEEEEEEEGGGHHHHHHHHHHSCT---------TCEEEEEEEESSGGGC
T ss_pred EEEEecCCCCCcCCC-CCceEEEEcchhhHHHHHHHHHhCCC---------CCcEEEEEEECCHHHh
Confidence 689999999886543 34789999999999999999998732 2367888888987765
No 30
>2qtl_A MSR;, methionine synthase reductase; alpha-beta-alpha structural motif, flattened antiparallel BE barrel, flexible hinge region, connecting domain; HET: FAD; 1.90A {Homo sapiens} PDB: 2qtz_A*
Probab=99.52 E-value=1e-13 Score=151.28 Aligned_cols=95 Identities=11% Similarity=0.083 Sum_probs=66.6
Q ss_pred eEEEEeCccc-CCCCCccccccEEEEecCcChHHHHHHHHHHHHHhhcCCCCCCceEEEEEeccCC-chHHHHHHHHHhc
Q 009819 221 ITASVEGPYG-HEVPYHLMYENLILVAGGIGISPFLAILSDILHRINEGKSCLPRNVLIVWAVKKS-NELSLLSNFYKES 298 (524)
Q Consensus 221 l~V~VdGPYG-~~~~~~~~~~~vVLIAGGiGITP~lSiL~~Ll~~~~~~~~~~~rkV~LiW~vRs~-~dl~wl~ell~el 298 (524)
.+|.|.||+| .|.......+++||||||+|||||++++++.....+.+......++.|+|++|+. +|+.+ .++++++
T Consensus 359 ~~V~v~~p~g~~F~Lp~~~~~piImIg~GTGIAPfrsflq~r~~~~~~~~~~~~~~v~LffG~R~~~~D~ly-~dEL~~~ 437 (539)
T 2qtl_A 359 PKISIFPRTTNSFHLPDDPSIPIIMVGPGTGIAPFIGFLQHREKLQEQHPDGNFGAMWLFFGCRHKDRDYLF-RKELRHF 437 (539)
T ss_dssp CEEEEEECSCCCCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHHHCTTCCCCCEEEEEEESCTTTCCTT-HHHHHHH
T ss_pred eEEEEEeeeCCCccCCccCCCCEEEEEcCccHHHHHHHHHHHHHHHhccccCCCCCEEEEEEECCcchhhHH-HHHHHHH
Confidence 3788999997 6654433457899999999999999999996543221110124689999999999 67744 4455554
Q ss_pred cCCcccCCCceEEEEEEcCCCC
Q 009819 299 ICPFFSDKLNLETFIYVTRETE 320 (524)
Q Consensus 299 l~~~~~~~~~l~I~IyVTr~~~ 320 (524)
. .....+++++.++|++.
T Consensus 438 ~----~~g~~~~l~~afSRd~~ 455 (539)
T 2qtl_A 438 L----KHGILTHLKVSFSRDAP 455 (539)
T ss_dssp H----HTTSSCEEEEEESSSCC
T ss_pred H----HhCCCcEEEEEEccCCC
Confidence 2 23445788888888653
No 31
>1tll_A Nitric-oxide synthase, brain; reductase module, FMN, FAD, NADP+, oxidoreductase; HET: FMN FAD NAP; 2.30A {Rattus norvegicus} SCOP: b.43.4.1 c.23.5.2 c.25.1.4
Probab=99.46 E-value=4.9e-13 Score=149.66 Aligned_cols=92 Identities=16% Similarity=0.121 Sum_probs=65.4
Q ss_pred EEEEeC-cccCCCCCccccccEEEEecCcChHHHHHHHHHHHHHhhcCCCCCCceEEEEEeccCCc-hHHHHHHHHHhcc
Q 009819 222 TASVEG-PYGHEVPYHLMYENLILVAGGIGISPFLAILSDILHRINEGKSCLPRNVLIVWAVKKSN-ELSLLSNFYKESI 299 (524)
Q Consensus 222 ~V~VdG-PYG~~~~~~~~~~~vVLIAGGiGITP~lSiL~~Ll~~~~~~~~~~~rkV~LiW~vRs~~-dl~wl~ell~ell 299 (524)
+|.|.| |.|.|.......+++||||||||||||++|+++++...+.. .....+++|+|++|+.+ ++.+ .++++++.
T Consensus 482 ~v~v~~~p~g~F~lp~~~~~piIlIagGtGIAP~~s~l~~~~~~~~~~-~~~~~~v~L~~G~R~~~~D~ly-~dEL~~~~ 559 (688)
T 1tll_A 482 VVPCFVRGAPSFHLPRNPQVPCILVGPGTGIAPFRSFWQQRQFDIQHK-GMNPCPMVLVFGCRQSKIDHIY-REETLQAK 559 (688)
T ss_dssp EEEEEEECCGGGSCCSCTTSCEEEEEEGGGGTTHHHHHHHHHHHHHHS-CCCCCCEEEEEEESCTTTTCTT-HHHHHHHH
T ss_pred EEEEEeccCCCcccCcCCCCCEEEEEcCcchHHHHHHHHHHHHhhhhc-cCCCCCEEEEEEeccchhhhhH-HHHHHHHH
Confidence 577888 66787654434578999999999999999999987642211 01256899999999997 5544 55555542
Q ss_pred CCcccCCCceEEEEEEcCCC
Q 009819 300 CPFFSDKLNLETFIYVTRET 319 (524)
Q Consensus 300 ~~~~~~~~~l~I~IyVTr~~ 319 (524)
.....++++++++++.
T Consensus 560 ----~~~~~~~l~~a~Sr~~ 575 (688)
T 1tll_A 560 ----NKGVFRELYTAYSREP 575 (688)
T ss_dssp ----HTTSEEEEEEEESSCT
T ss_pred ----HcCCceEEEEEECCCC
Confidence 2334578888888764
No 32
>3qfs_A CPR, P450R, NADPH--cytochrome P450 reductase; flavoprotein, FAD, oxidoreductase; HET: FAD NAP; 1.40A {Homo sapiens} PDB: 3qft_A*
Probab=99.43 E-value=4.9e-13 Score=143.29 Aligned_cols=91 Identities=14% Similarity=0.157 Sum_probs=63.7
Q ss_pred EEEEeCcccCCCCCccccccEEEEecCcChHHHHHHHHHHHHHhhcCCCCCCceEEEEEeccCC-chHHHHHHHHHhccC
Q 009819 222 TASVEGPYGHEVPYHLMYENLILVAGGIGISPFLAILSDILHRINEGKSCLPRNVLIVWAVKKS-NELSLLSNFYKESIC 300 (524)
Q Consensus 222 ~V~VdGPYG~~~~~~~~~~~vVLIAGGiGITP~lSiL~~Ll~~~~~~~~~~~rkV~LiW~vRs~-~dl~wl~ell~ell~ 300 (524)
+|.|.+|+|.|.......++++|||||+|||||++++++.+...+.+. ...++.|+|++|+. +|+.+ .++++++.+
T Consensus 289 ~v~v~~p~g~F~lp~~~~~piImIggGTGIAPfrs~lq~r~~l~~~g~--~~~~~~Lf~G~R~~~~D~ly-~dEl~~l~~ 365 (458)
T 3qfs_A 289 LVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPFIGFIQERAWLRQQGK--EVGETLLYYGCRRSDEDYLY-REELAQFHR 365 (458)
T ss_dssp EEEEEEECCSCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHHHTC--CCCCEEEEEEESCTTTSCTT-HHHHHHHHH
T ss_pred EEEEEecCCCcccCCCCCCceEEEcCCcchhhHHHHHHHHHHHHhcCC--CCCCEEEEEEeCCchHhhhH-HHHHHHHHH
Confidence 688999999886654445789999999999999999998643211121 24579999999996 67644 444555321
Q ss_pred CcccCCCceEEEEEEcCCC
Q 009819 301 PFFSDKLNLETFIYVTRET 319 (524)
Q Consensus 301 ~~~~~~~~l~I~IyVTr~~ 319 (524)
....+++++.+++++
T Consensus 366 ----~g~l~~l~~a~SRd~ 380 (458)
T 3qfs_A 366 ----DGALTQLNVAFSREQ 380 (458)
T ss_dssp ----HTSSSEEEEEETTSS
T ss_pred ----cCCCCEEEEEEECCC
Confidence 222347777887754
No 33
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=99.41 E-value=3.8e-13 Score=121.96 Aligned_cols=62 Identities=19% Similarity=0.295 Sum_probs=49.2
Q ss_pred EEEeCcccCCCCCccccccEEEEecCcChHHHHHHHHHHHHHhhcCCCCCCceEEEEEeccCCchHHHHHHH
Q 009819 223 ASVEGPYGHEVPYHLMYENLILVAGGIGISPFLAILSDILHRINEGKSCLPRNVLIVWAVKKSNELSLLSNF 294 (524)
Q Consensus 223 V~VdGPYG~~~~~~~~~~~vVLIAGGiGITP~lSiL~~Ll~~~~~~~~~~~rkV~LiW~vRs~~dl~wl~el 294 (524)
+.|.||||.++... ..++++||||||||||+++|+++++++ ..+++|+ ++|+.+++.+.+++
T Consensus 3 ~~v~GP~G~~~~~~-~~~~~llIaGG~GiaPl~sm~~~l~~~--------~~~v~l~-g~R~~~~~~~~~el 64 (142)
T 3lyu_A 3 LNVAGPLGTPVPME-KFGKILAIGAYTGIVEVYPIAKAWQEI--------GNDVTTL-HVTFEPMVILKEEL 64 (142)
T ss_dssp ----CCCSCCBCCC-CCSEEEEEEETTHHHHHHHHHHHHHHT--------TCEEEEE-EEEEGGGCCSHHHH
T ss_pred eeeeCCCCCCccCC-CCCeEEEEECcCcHHHHHHHHHHHHhc--------CCcEEEE-EeCCHHHhhHHHHH
Confidence 67999999997653 468999999999999999999998764 2479999 99999999665544
No 34
>3qe2_A CPR, P450R, NADPH--cytochrome P450 reductase; cypor, antley-bixler syndrome, flavoprotein, FMN, FAD, oxidoreductase; HET: FAD FMN NAP; 1.75A {Homo sapiens} PDB: 3qfc_A* 3qfr_A* 1amo_A* 1j9z_A* 1ja0_A* 1ja1_A* 3es9_A* 3ojw_A* 3ojx_A* 3fjo_A* 1b1c_A*
Probab=99.38 E-value=1.2e-12 Score=144.93 Aligned_cols=91 Identities=14% Similarity=0.157 Sum_probs=65.7
Q ss_pred EEEEeCcccCCCCCccccccEEEEecCcChHHHHHHHHHHHHHhhcCCCCCCceEEEEEeccCC-chHHHHHHHHHhccC
Q 009819 222 TASVEGPYGHEVPYHLMYENLILVAGGIGISPFLAILSDILHRINEGKSCLPRNVLIVWAVKKS-NELSLLSNFYKESIC 300 (524)
Q Consensus 222 ~V~VdGPYG~~~~~~~~~~~vVLIAGGiGITP~lSiL~~Ll~~~~~~~~~~~rkV~LiW~vRs~-~dl~wl~ell~ell~ 300 (524)
+|.|.||+|.|.......++++|||||+|||||++++++.+...+.+. ...++.|+|++|+. +|+.+ .++++++.+
T Consensus 449 ~v~v~~p~g~F~lp~~~~~piimIg~GtGIAPfrs~l~~r~~~~~~g~--~~~~~~L~~G~R~~~~D~ly-~~el~~~~~ 525 (618)
T 3qe2_A 449 LVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPFIGFIQERAWLRQQGK--EVGETLLYYGCRRSDEDYLY-REELAQFHR 525 (618)
T ss_dssp EEEEEEECCSCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHHTTC--CCCCEEEEEEESCTTTSCTT-HHHHHHHHH
T ss_pred EEEEEEecCcccCCCCCCCCeEEEcCCcchhhHHHHHHHHHHHHhcCC--CCCCEEEEEecCCCccccch-HHHHHHHHh
Confidence 688899999886654445789999999999999999999875433221 24679999999998 47644 445555321
Q ss_pred CcccCCCceEEEEEEcCCC
Q 009819 301 PFFSDKLNLETFIYVTRET 319 (524)
Q Consensus 301 ~~~~~~~~l~I~IyVTr~~ 319 (524)
....+++++.++|+.
T Consensus 526 ----~g~l~~l~~a~Srd~ 540 (618)
T 3qe2_A 526 ----DGALTQLNVAFSREQ 540 (618)
T ss_dssp ----HTSSSEEEEEETTSS
T ss_pred ----cCCCcEEEEEEcCCC
Confidence 222348888888754
No 35
>2bpo_A CPR, P450R, NADPH-cytochrom P450 reductase; NADPH-cytochrome P450 reductase, diflavin reductase, FAD, FMN-binding, electron transfer; HET: FAD FMN NAP; 2.9A {Saccharomyces cerevisiae} PDB: 2bn4_A* 2bf4_A*
Probab=99.36 E-value=2e-12 Score=144.66 Aligned_cols=77 Identities=12% Similarity=0.281 Sum_probs=53.8
Q ss_pred cccEEEEecCcChHHHHHHHHHHHHHhhc----CCCCCCceEEEEEeccCCchHHHHHHHHHhccCCcccCCCceEEEEE
Q 009819 239 YENLILVAGGIGISPFLAILSDILHRINE----GKSCLPRNVLIVWAVKKSNELSLLSNFYKESICPFFSDKLNLETFIY 314 (524)
Q Consensus 239 ~~~vVLIAGGiGITP~lSiL~~Ll~~~~~----~~~~~~rkV~LiW~vRs~~dl~wl~ell~ell~~~~~~~~~l~I~Iy 314 (524)
.+++||||||+|||||+++|++++.+... .......++.|+|++|+.+|+.+ +++++++.. .....+++++.
T Consensus 524 ~~piImIg~GTGIAPfrs~lq~r~~~~~~~~~~~~g~~~~~~~L~fG~R~~~D~ly-~dEl~~~~~---~~g~~~~l~~a 599 (682)
T 2bpo_A 524 STPVIMIGPGTGVAPFRGFIRERVAFLESQKKGGNNVSLGKHILFYGSRNTDDFLY-QDEWPEYAK---KLDGSFEMVVA 599 (682)
T ss_dssp TSCEEEEEEGGGGHHHHHHHHHHHHHHHTCC----CCCCCCEEEEEEESSSSSCTT-TTTHHHHHH---HHGGGEEEEEE
T ss_pred CCCEEEEecCcChHHHHHHHHHHHHhhcccccccccCCcCCEEEEEecCChhhhhh-HHHHHHHHH---hcCCceEEEEE
Confidence 46899999999999999999998765320 00112468999999999988744 444444311 12345888888
Q ss_pred EcCCC
Q 009819 315 VTRET 319 (524)
Q Consensus 315 VTr~~ 319 (524)
++|.+
T Consensus 600 fSr~d 604 (682)
T 2bpo_A 600 HSRLP 604 (682)
T ss_dssp ESCCT
T ss_pred ECCCC
Confidence 88853
No 36
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=99.36 E-value=1e-12 Score=121.15 Aligned_cols=63 Identities=19% Similarity=0.298 Sum_probs=49.2
Q ss_pred E-EEEeCcccCCCCCccccccEEEEecCcChHHHHHHHHHHHHHhhcCCCCCCceEEEEEeccCCchHHHHHHH
Q 009819 222 T-ASVEGPYGHEVPYHLMYENLILVAGGIGISPFLAILSDILHRINEGKSCLPRNVLIVWAVKKSNELSLLSNF 294 (524)
Q Consensus 222 ~-V~VdGPYG~~~~~~~~~~~vVLIAGGiGITP~lSiL~~Ll~~~~~~~~~~~rkV~LiW~vRs~~dl~wl~el 294 (524)
+ +.|+||||.++... ..++++||||||||||+++|++++.++ .++++|+ ++|+.+++.+.+++
T Consensus 6 ~vl~v~gP~G~~f~~~-~~~~~llIaGG~GItPl~sm~~~l~~~--------~~~v~l~-g~r~~~d~~~~~el 69 (158)
T 3lrx_A 6 SLLNVAGPLGTPVPME-KFGKILAIGAYTGIVEVYPIAKAWQEI--------GNDVTTL-HVTFEPMVILKEEL 69 (158)
T ss_dssp ------CCCCCCBCCC-CCSEEEEEEETTHHHHHHHHHHHHHHH--------TCEEEEE-EECBGGGCCSHHHH
T ss_pred EeeEEECCCCCCCccC-CCCeEEEEEccCcHHHHHHHHHHHHhc--------CCcEEEE-EeCCHHHhhHHHHH
Confidence 5 58999999987543 568999999999999999999999764 2479999 99999999766554
No 37
>2eix_A NADH-cytochrome B5 reductase; flavoprotein, FAD-binding domain, NADH-binding, oxidoreducta; HET: FAD; 1.56A {Physarum polycephalum}
Probab=82.31 E-value=1.1 Score=42.16 Aligned_cols=51 Identities=18% Similarity=0.154 Sum_probs=43.0
Q ss_pred CCccCCCcEEEEEeCCCCCccccceEeEecCCCCCCeEEEEEEee--CchHHHH
Q 009819 12 YLRYNALSFFFLQVRELSWLQWHPFSVSSSPLEGKYHSSVLIKVL--GEWTENL 63 (524)
Q Consensus 12 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~S~P~~~~~~i~~~IK~~--G~~~~~~ 63 (524)
.+.|+||||++|+++.-+..++||||++|.+.+ .+.++|+||+. |.+|+.|
T Consensus 39 ~~~~~pGq~v~l~~~~~g~~~~R~ysi~s~~~~-~~~~~l~vk~~~~G~~S~~l 91 (243)
T 2eix_A 39 VVGLPIGQHMSVKATVDGKEIYRPYTPVSSDDE-KGYFDLIIKVYEKGQMSQYI 91 (243)
T ss_dssp CCCCCTTCEEEEEEEETTEEEEEEECCCSCTTC-CSEEEEEEECCTTCHHHHHH
T ss_pred ccCcCCceEEEEEEeeCCCEEEeeeeecCCCCC-CCEEEEEEEEcCCCCcchHh
Confidence 578999999999998656678999999999864 47899999996 8787655
No 38
>1umk_A B5R, NADH-cytochrome B5 reductase; flavoprotein, beta barrel, FAD-binding domain, NADH-binding domain, oxidoreductase; HET: FAD; 1.75A {Homo sapiens} SCOP: b.43.4.2 c.25.1.1 PDB: 1ndh_A* 1i7p_A* 1ib0_A* 1qx4_A*
Probab=67.06 E-value=2.9 Score=40.16 Aligned_cols=44 Identities=25% Similarity=0.219 Sum_probs=37.9
Q ss_pred CCccCCCcEEEEEeCCCCCccccceEeEecCCCCCCeEEEEEEee
Q 009819 12 YLRYNALSFFFLQVRELSWLQWHPFSVSSSPLEGKYHSSVLIKVL 56 (524)
Q Consensus 12 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~S~P~~~~~~i~~~IK~~ 56 (524)
.+.|.||||++|+++.-+..++|||||+|++.+ .+.++|+||+.
T Consensus 44 ~~~~~pGQ~v~l~~~~~g~~~~R~ySi~s~~~~-~~~~~l~vk~~ 87 (275)
T 1umk_A 44 ILGLPVGQHIYLSARIDGNLVVRPYTPISSDDD-KGFVDLVIKVY 87 (275)
T ss_dssp BCCCCTTCEEEEEEEETTEEEEEEECCSSCTTC-CSEEEEEEECC
T ss_pred ccCCCCCcEEEEEEeeCCcEEEeccccCCccCC-CCeEEEEEEEe
Confidence 578999999999987666779999999999864 47899999976
No 39
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=48.70 E-value=15 Score=36.80 Aligned_cols=25 Identities=36% Similarity=0.655 Sum_probs=21.7
Q ss_pred ccEEEEecCcC--hHHHHHHHHHHHHH
Q 009819 240 ENLILVAGGIG--ISPFLAILSDILHR 264 (524)
Q Consensus 240 ~~vVLIAGGiG--ITP~lSiL~~Ll~~ 264 (524)
+++++.||||| |.|.+++.++|.++
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~~ 29 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQAR 29 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHT
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHhC
Confidence 57899999997 89999999998764
No 40
>2cnd_A NADH-dependent nitrate reductase; nitrate assimilating enzyme, oxidoreductase, nitrogenous acceptor; HET: FAD; 2.50A {Zea mays} SCOP: b.43.4.2 c.25.1.1 PDB: 1cnf_A* 1cne_A*
Probab=44.51 E-value=9.4 Score=36.37 Aligned_cols=44 Identities=20% Similarity=0.108 Sum_probs=38.0
Q ss_pred CCccCCCcEEEEEeCCCCCccccceEeEecCCCCCCeEEEEEEee
Q 009819 12 YLRYNALSFFFLQVRELSWLQWHPFSVSSSPLEGKYHSSVLIKVL 56 (524)
Q Consensus 12 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~S~P~~~~~~i~~~IK~~ 56 (524)
.+.|+||||++|+++.-+..++|||||+|++.+ .+.++|+||..
T Consensus 40 ~~~~~pGQ~v~l~~~~~g~~~~R~ySi~s~~~~-~~~~~l~vk~~ 83 (270)
T 2cnd_A 40 VLGLPIGKHIFVCATIEGKLCMRAYTPTSMVDE-IGHFDLLVKVY 83 (270)
T ss_dssp CCCCCTTCEEEEEEEETTEEEEEEECCCSCTTC-CSEEEEEEECC
T ss_pred ccCCCCCCEEEEEeeeCCcEEEEeeccCCCccC-CCEEEEEEEEe
Confidence 578999999999987666778999999999864 47899999974
Done!