Query         009821
Match_columns 524
No_of_seqs    197 out of 2265
Neff          11.2
Searched_HMMs 46136
Date          Thu Mar 28 17:44:04 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009821.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009821hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 1.3E-85 2.9E-90  630.7  44.9  455   52-516    25-488 (489)
  2 PLN02971 tryptophan N-hydroxyl 100.0 4.2E-80 9.1E-85  617.7  44.6  465   50-516    54-534 (543)
  3 KOG0158 Cytochrome P450 CYP3/C 100.0 3.7E-80   8E-85  583.0  37.6  459   40-516    18-499 (499)
  4 PLN02687 flavonoid 3'-monooxyg 100.0 6.9E-79 1.5E-83  607.3  46.1  469   46-516    27-509 (517)
  5 PLN03112 cytochrome P450 famil 100.0 4.4E-78 9.6E-83  602.9  47.5  490   26-516     5-508 (514)
  6 PLN03234 cytochrome P450 83B1; 100.0   3E-78 6.6E-83  602.4  45.3  461   50-515    25-498 (499)
  7 PLN00110 flavonoid 3',5'-hydro 100.0 8.4E-78 1.8E-82  595.6  46.4  462   51-516    29-497 (504)
  8 PLN02183 ferulate 5-hydroxylas 100.0 5.4E-78 1.2E-82  600.7  43.9  455   52-515    35-511 (516)
  9 PTZ00404 cytochrome P450; Prov 100.0   1E-76 2.2E-81  588.8  43.7  451   50-515    26-482 (482)
 10 PLN02394 trans-cinnamate 4-mon 100.0 1.2E-76 2.6E-81  591.5  43.8  462   50-516    27-502 (503)
 11 PLN00168 Cytochrome P450; Prov 100.0 2.8E-76 6.1E-81  588.9  45.2  464   49-517    31-518 (519)
 12 PLN02966 cytochrome P450 83A1  100.0 8.3E-76 1.8E-80  583.6  44.1  459   51-516    27-500 (502)
 13 KOG0157 Cytochrome P450 CYP4/C 100.0 1.1E-75 2.4E-80  575.1  34.2  452   51-517    33-497 (497)
 14 PLN02655 ent-kaurene oxidase   100.0 1.5E-74 3.2E-79  569.3  40.8  451   55-517     1-465 (466)
 15 PLN02290 cytokinin trans-hydro 100.0 5.5E-75 1.2E-79  580.9  36.2  447   52-517    41-516 (516)
 16 PLN02500 cytochrome P450 90B1  100.0 3.2E-74   7E-79  571.0  40.1  441   48-515    33-489 (490)
 17 PLN03018 homomethionine N-hydr 100.0 5.4E-73 1.2E-77  561.8  45.8  464   51-516    38-524 (534)
 18 PLN02774 brassinosteroid-6-oxi 100.0   3E-73 6.6E-78  559.4  38.4  430   51-514    29-462 (463)
 19 KOG0159 Cytochrome P450 CYP11/ 100.0   2E-73 4.3E-78  523.9  30.7  451   51-517    48-519 (519)
 20 PLN02169 fatty acid (omega-1)- 100.0 1.2E-72 2.6E-77  557.7  37.7  447   54-515    32-499 (500)
 21 PF00067 p450:  Cytochrome P450 100.0 1.8E-73 3.9E-78  568.7  28.0  450   55-512     1-463 (463)
 22 PLN03195 fatty acid omega-hydr 100.0 3.3E-72 7.1E-77  560.3  36.2  453   55-516    32-516 (516)
 23 PLN02738 carotene beta-ring hy 100.0 3.2E-71 6.9E-76  554.6  39.0  437   71-518   150-597 (633)
 24 PLN03141 3-epi-6-deoxocathaste 100.0 4.4E-71 9.4E-76  543.0  37.3  436   49-517     3-451 (452)
 25 PLN02196 abscisic acid 8'-hydr 100.0 1.2E-70 2.6E-75  540.5  40.0  428   48-514    30-461 (463)
 26 PLN02302 ent-kaurenoic acid ox 100.0 1.8E-70 3.9E-75  547.1  40.9  442   47-517    36-489 (490)
 27 PLN02987 Cytochrome P450, fami 100.0   5E-70 1.1E-74  533.8  39.3  436   48-516    25-469 (472)
 28 PLN02936 epsilon-ring hydroxyl 100.0 3.6E-70 7.9E-75  540.3  35.5  448   55-517    14-483 (489)
 29 KOG0684 Cytochrome P450 [Secon 100.0 1.7E-69 3.8E-74  484.9  34.0  439   58-517    37-486 (486)
 30 PLN02426 cytochrome P450, fami 100.0 2.1E-67 4.7E-72  519.2  38.8  438   61-516    49-500 (502)
 31 PLN02648 allene oxide synthase 100.0   3E-60 6.6E-65  460.6  29.7  405   49-489    13-462 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 4.6E-54   1E-58  413.0  31.1  380   74-515    24-410 (411)
 33 PF05952 ComX:  Bacillus compet  58.6     9.7 0.00021   24.7   2.1   24  332-355     5-28  (57)
 34 PF08492 SRP72:  SRP72 RNA-bind  54.1     9.2  0.0002   25.1   1.5    7  431-437    44-50  (59)
 35 PF12508 DUF3714:  Protein of u  53.1     3.2   7E-05   35.3  -0.8   42  369-412    53-94  (200)
 36 PF15330 SIT:  SHP2-interacting  47.1      46   0.001   25.2   4.5   11   60-70     45-55  (107)
 37 PTZ00370 STEVOR; Provisional    44.9      23 0.00051   31.7   3.1   19   30-48    265-283 (296)
 38 PF14459 Prok-E2_C:  Prokaryoti  44.3     9.5 0.00021   28.1   0.5   92  370-467    15-123 (131)
 39 PRK06789 flagellar motor switc  43.9      20 0.00044   24.8   2.0   39  375-413    22-62  (74)
 40 PF09201 SRX:  SRX;  InterPro:   37.2      33  0.0007   26.9   2.4   23  459-481    18-40  (148)
 41 KOG3506 40S ribosomal protein   36.6      16 0.00034   23.3   0.5   11  452-462    12-22  (56)
 42 PF12554 MOZART1:  Mitotic-spin  36.1 1.1E+02  0.0024   19.2   4.2   41  309-350     7-47  (48)
 43 PF06024 DUF912:  Nucleopolyhed  33.8      31 0.00066   25.8   1.8   29   21-49     63-91  (101)
 44 PF05393 Hum_adeno_E3A:  Human   32.7      73  0.0016   22.7   3.3    6   60-65     66-71  (94)
 45 TIGR03779 Bac_Flav_CT_M Bacter  29.4      10 0.00023   36.2  -1.5   44  368-413   255-298 (410)
 46 PF14483 Cut8_M:  Cut8 dimerisa  29.3      86  0.0019   18.5   2.8   18  331-348    17-35  (38)
 47 PHA03049 IMV membrane protein;  28.1 1.6E+02  0.0036   19.7   4.1   20   27-46      7-26  (68)
 48 PF13625 Helicase_C_3:  Helicas  28.1 1.3E+02  0.0029   23.6   4.7   42   72-115    74-115 (129)
 49 PF14550 Peptidase_U35_2:  Puta  27.4      44 0.00094   26.0   1.8   22  391-412    71-92  (122)
 50 PF12273 RCR:  Chitin synthesis  24.8 1.1E+02  0.0025   24.0   3.8    9   39-47     21-29  (130)
 51 PF14129 DUF4296:  Domain of un  24.1 2.8E+02   0.006   19.9   6.7   48  307-355    32-79  (87)
 52 PF05084 GRA6:  Granule antigen  23.9 1.6E+02  0.0036   23.7   4.3   35   32-66    159-193 (215)
 53 PF04798 Baculo_19:  Baculoviru  23.3      30 0.00064   27.5   0.2   35  430-469    43-77  (146)
 54 PF14824 Sirohm_synth_M:  Siroh  22.4   1E+02  0.0022   17.1   2.1   15  339-353    15-29  (30)
 55 KOG3653 Transforming growth fa  21.7 3.9E+02  0.0084   26.5   7.1   38   83-121   221-259 (534)
 56 PF15206 FAM209:  FAM209 family  21.4      98  0.0021   24.3   2.6   16   49-64     62-77  (150)
 57 PF05961 Chordopox_A13L:  Chord  20.9 2.7E+02  0.0059   18.9   4.1   21   26-46      6-26  (68)
 58 PF10777 YlaC:  Inner membrane   20.4      45 0.00097   26.6   0.6   38  332-369   114-151 (155)
 59 TIGR00589 ogt O-6-methylguanin  20.3 1.8E+02  0.0039   20.6   3.7   61  341-403     2-67  (80)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.3e-85  Score=630.70  Aligned_cols=455  Identities=43%  Similarity=0.759  Sum_probs=399.3

Q ss_pred             CCCCCCCCCCceecccccCCCC-hhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCc-ccchhh
Q 009821           52 PPLPPGPRALPLVGNILSAEPN-LHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDP-SAAASV  129 (524)
Q Consensus        52 ~~~ppgp~~~p~iG~~~~~~~~-~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~-~~~~~~  129 (524)
                      .++||||.++|+|||+++++.. +|+.+.++.++|||+|.+|+|..++|||+|++.++|++.+++..|++|+. ......
T Consensus        25 ~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~~~  104 (489)
T KOG0156|consen   25 RNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATLKY  104 (489)
T ss_pred             CCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhHHH
Confidence            6789999999999999999776 99999999999999999999999999999999999999999999999997 223344


Q ss_pred             hccCCcccc---cCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhcc-CCCceehhHHHHHHHHHHHHHHHh
Q 009821          130 LTYGGKSIG---ASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGR-VGSPIKVGELMFLTSLDVATRMLW  205 (524)
Q Consensus       130 ~~~~~~~~~---~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~-~~~~vd~~~~~~~~~~dvi~~~~f  205 (524)
                      +.+++.++.   +|+.|+.+||.....+++...++.......++++.+++.+... .+++||+...+..++.++|++++|
T Consensus       105 ~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~~~~~~~vdl~~~l~~~~~nvI~~~~f  184 (489)
T KOG0156|consen  105 LSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSKSKKGEPVDLSELLDLLVGNVICRMLF  184 (489)
T ss_pred             hcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHhcCCCceeeHHHHHHHHHHHHHHHHHh
Confidence            444444444   8899999999998899999999999888899999999988862 227999999999999999999999


Q ss_pred             ccCCCCCCchHHHHHHHHHHHHHHHHhcCCCcccccc-cccccC-ccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCC
Q 009821          206 GASLRGEDWDAVAIQFREVLEEMFQVLGSGNISDLFP-LLTRFD-LQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEG  283 (524)
Q Consensus       206 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~~~-~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~  283 (524)
                      |.++...+.+ ...++.+.+.+.....+.....+++| ++.++. ..+..+..+....++..++++.|++++++.+ .  
T Consensus       185 G~rf~~~~~~-~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~~-~--  260 (489)
T KOG0156|consen  185 GRRFEEEDEE-EFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKIG-D--  260 (489)
T ss_pred             CCccccCCch-HHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-c--
Confidence            9999876332 44568889999999998888899999 566654 3356777888888899999999999877541 1  


Q ss_pred             CCcccHHHHHHHHhhcCCCC-CcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcccc
Q 009821          284 KSSKDFLQTLLELQQQGDYS-LSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEE  362 (524)
Q Consensus       284 ~~~~d~l~~ll~~~~~~~~~-l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~  362 (524)
                      ++..|+++.++...++++.. ++++++.+.+. .+++||+|||++|+.|++.+|++|||+|+|+++||++++|.++.++.
T Consensus       261 ~~~~D~vD~lL~~~~~~~~~~~t~~~i~~~~~-dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG~~r~v~e  339 (489)
T KOG0156|consen  261 EEGRDFVDALLKLMKEEKAEGLTDDHLKALIL-DLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVGKGRLVSE  339 (489)
T ss_pred             CCCCcHHHHHHHhhcccccCCCCHHHHHHHHH-HHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCh
Confidence            22289999999986653333 89999999998 99999999999999999999999999999999999999998887999


Q ss_pred             cccCCChhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCC
Q 009821          363 FHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIG  442 (524)
Q Consensus       363 ~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~  442 (524)
                      +|+.+||||+|||+|++|+||++|+.++|.+++|+.++||.|||||.|+++.|++||||++|+||++|+||||++.+   
T Consensus       340 ~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PERFl~~~---  416 (489)
T KOG0156|consen  340 SDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPERFLDSN---  416 (489)
T ss_pred             hhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhhhcCCc---
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999763   


Q ss_pred             cccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCCCCCcccccccccccCCCceeeeecCC
Q 009821          443 DFRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTKFDLSDKLLMALKKSEPLVVIPTPRS  516 (524)
Q Consensus       443 ~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  516 (524)
                      +.+.....++|||.|+|+|||..+|.+|+.++++.|+++||++.+.| ++++... +.+...+.++.+...+|.
T Consensus       417 d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~-~~d~~e~-~~~~~~~~pl~~~~~~r~  488 (489)
T KOG0156|consen  417 DGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG-KVDMEEA-GLTLKKKKPLKAVPVPRL  488 (489)
T ss_pred             cccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC-CCCCccc-ccceecCCcceeeeecCC
Confidence            11234578999999999999999999999999999999999999887 6677665 477777788888888774


No 2  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=4.2e-80  Score=617.70  Aligned_cols=465  Identities=28%  Similarity=0.498  Sum_probs=365.5

Q ss_pred             CCCCCCCCCCCCceecccccCCC--ChhHHHHHHHHHhC-CeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCcccc
Q 009821           50 STPPLPPGPRALPLVGNILSAEP--NLHRYFTKLSQIYG-PIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAA  126 (524)
Q Consensus        50 ~~~~~ppgp~~~p~iG~~~~~~~--~~~~~~~~~~~kyG-~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~  126 (524)
                      ++.+.||||+++|++||++.+..  ..+.++.++.++|| ++|++++|+.++|+|+||+.+++++.+++..|.+|+....
T Consensus        54 r~~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~~  133 (543)
T PLN02971         54 KLHPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTYA  133 (543)
T ss_pred             CCCCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCcccc
Confidence            35578999999999999987632  24678999999999 7999999999999999999999999998888888875443


Q ss_pred             hhhhccCCc--cc-ccCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhcc--CCCceehhHHHHHHHHHHHH
Q 009821          127 ASVLTYGGK--SI-GASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGR--VGSPIKVGELMFLTSLDVAT  201 (524)
Q Consensus       127 ~~~~~~~~~--~~-~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~--~~~~vd~~~~~~~~~~dvi~  201 (524)
                      ...++.+..  .+ .+|+.|+++|+.+...+++....+.+.+.++++++.+++.+...  .++++|+.+.+..+++|+++
T Consensus       134 ~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~  213 (543)
T PLN02971        134 QKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCGNAIK  213 (543)
T ss_pred             hhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHHHH
Confidence            333332211  22 27999999999997677777777778888888888888777542  45679999999999999999


Q ss_pred             HHHhccCCCCCC---chHHHHHHHHHHHHHHHHhc---CCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhcccc
Q 009821          202 RMLWGASLRGED---WDAVAIQFREVLEEMFQVLG---SGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQ  275 (524)
Q Consensus       202 ~~~fG~~~~~~~---~~~~~~~~~~~~~~~~~~~~---~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~  275 (524)
                      +++||.++....   .+....++...+...+....   .....+++|++++++..+..+...+..+.+.+++.+.+++++
T Consensus       214 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  293 (543)
T PLN02971        214 RLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPIIDERI  293 (543)
T ss_pred             HHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999874321   00011222333333332211   122345567665543223345556666777888888887765


Q ss_pred             CCCCCCCCCCcccHHHHHHHHhhcCCC-CCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhh
Q 009821          276 SGQDMNEGKSSKDFLQTLLELQQQGDY-SLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVV  354 (524)
Q Consensus       276 ~~~~~~~~~~~~d~l~~ll~~~~~~~~-~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~  354 (524)
                      +..+..+.....|+++.+++..++++. .++++++.+++. .+++||+|||+++++|++++|++|||+|+|+|+||++++
T Consensus       294 ~~~~~~~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~-~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~~v~  372 (543)
T PLN02971        294 KMWREGKRTQIEDFLDIFISIKDEAGQPLLTADEIKPTIK-ELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEIDRVV  372 (543)
T ss_pred             HHHhccCCCCCcCHHHHHHhhhcccCCCCCCHHHHHHhHH-HHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHh
Confidence            432111112346999999986543322 489999999998 999999999999999999999999999999999999999


Q ss_pred             cCCCcccccccCCChhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCc
Q 009821          355 ARDSVVEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDR  434 (524)
Q Consensus       355 ~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR  434 (524)
                      +.++.++++++.+|||++|||+|+||++|++|..++|.+.+|++++||.||||+.|++++|++||||++|+||++|+|||
T Consensus       373 g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~PeR  452 (543)
T PLN02971        373 GKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKPER  452 (543)
T ss_pred             CCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCCccccCccc
Confidence            87788999999999999999999999999999877899999999999999999999999999999999999999999999


Q ss_pred             cccccCCCcccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCC-CCCCcccccccccccCCCceeeee
Q 009821          435 FLEDVKIGDFRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEG-TKFDLSDKLLMALKKSEPLVVIPT  513 (524)
Q Consensus       435 ~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~  513 (524)
                      |+++..+.....++..|+|||+|+|.|+|++||+.|+++++|+|+++|++++.++ ..++.++.++ ++..+.++.+.++
T Consensus       453 fl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  531 (543)
T PLN02971        453 HLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSETRVELMESSH-DMFLSKPLVMVGE  531 (543)
T ss_pred             CCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcchhhhcC-cccccccceeeee
Confidence            9964322111123568999999999999999999999999999999999998765 3566666666 6656678999999


Q ss_pred             cCC
Q 009821          514 PRS  516 (524)
Q Consensus       514 ~r~  516 (524)
                      +|.
T Consensus       532 ~~~  534 (543)
T PLN02971        532 LRL  534 (543)
T ss_pred             ecC
Confidence            993


No 3  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=3.7e-80  Score=583.02  Aligned_cols=459  Identities=25%  Similarity=0.382  Sum_probs=362.3

Q ss_pred             HHHhhcCCCCCCCCCCCCCCCCceecccccCC--CChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhcccc
Q 009821           40 YAWFIKKPTRSTPPLPPGPRALPLVGNILSAE--PNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVV  117 (524)
Q Consensus        40 ~~~~~~~~~~~~~~~ppgp~~~p~iG~~~~~~--~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~  117 (524)
                      |.++.+.......+.+|+|++.|++||+..+.  ........+...+||+++.++.+.++.++|+||+++++|+.+..+.
T Consensus        18 y~~~~~~~~yw~rrGi~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~   97 (499)
T KOG0158|consen   18 YLWLRWTYSYWRRRGIPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDN   97 (499)
T ss_pred             HHHHHhhhhhhccCCCCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCcc
Confidence            33333333334444788898899999988762  2224444444455599999999999999999999999999999888


Q ss_pred             ccCC--CcccchhhhccCCcccc--cCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccC--CCceehhHH
Q 009821          118 FANR--DPSAAASVLTYGGKSIG--ASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRV--GSPIKVGEL  191 (524)
Q Consensus       118 ~~~~--~~~~~~~~~~~~~~~~~--~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~--~~~vd~~~~  191 (524)
                      |..|  +....... .....+++  .|+.||+.|..+. |.|++..++.+.+.+.+..+++++.+.+..  +..+++.+.
T Consensus        98 F~~r~~~~~~d~~~-~l~~~~Lf~~~g~~WK~lR~~ls-P~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~~~~~~~~dl  175 (499)
T KOG0158|consen   98 FYNRKRPIYGDPED-PLSALNLFFLRGERWKRLRTKLS-PTFTSGKLKKMFPTMEEVGDELVRHLRRKSEGGQEGEIKDL  175 (499)
T ss_pred             CcCCCCCCcCCCCC-cccccCchhccCchHHHHHHhhc-cccchhhHHHHHHHHHHHHHHHHHHHHHhhcccCCccHHHH
Confidence            8884  33322221 22223333  9999999999997 999999999999999999999999998752  258899999


Q ss_pred             HHHHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHH-hcCCC----cccccccccccCccchHHHHHHHHHHHHHH
Q 009821          192 MFLTSLDVATRMLWGASLRGEDWDAVAIQFREVLEEMFQV-LGSGN----ISDLFPLLTRFDLQGLESKAKKLTVRLDKI  266 (524)
Q Consensus       192 ~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~  266 (524)
                      +..+|.|||++++||.+.+...+  ....|.......+.. .....    ....+|.+....  .......+..+.+.+.
T Consensus       176 ~~~yT~DVI~~~AfG~~~~s~~d--~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l--~~~~~~~~~~~~~~~~  251 (499)
T KOG0158|consen  176 CARYTTDVIGSCAFGLDANSLRD--PKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPL--RVKLFPEDVTDFFRKL  251 (499)
T ss_pred             HHHHHHHHHhHhhcccchhhhcC--chHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhh--hcccChHHHHHHHHHH
Confidence            99999999999999998876653  234455434443333 11111    122334333221  1122234555666667


Q ss_pred             HHHhhccccCCCCCCCCCCcccHHHHHHHHhhc---C--CC-CCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCc
Q 009821          267 FESLLRPGQSGQDMNEGKSSKDFLQTLLELQQQ---G--DY-SLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKP  340 (524)
Q Consensus       267 ~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~---~--~~-~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~p  340 (524)
                      +.+.++.|..+     ...+.|+++.+++.+.+   +  .. .++.+|++++++ .+++||.||||+++++++|+||+||
T Consensus       252 v~~~v~~R~~~-----~~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQaf-vFl~AGfeTts~tlsf~lYeLA~~P  325 (499)
T KOG0158|consen  252 VNSRVEQREKE-----NIERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAF-VFLLAGFETTASTLSFALYELAKNP  325 (499)
T ss_pred             HHHHHHHHHhc-----CCCCchHHHHHHHhhcccccccccccccCHHHHHHHHH-HHHHhhhHhHHHHHHHHHHHHhcCh
Confidence            77777766222     45788999999998753   1  12 599999999999 9999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhcCCCcccccccCCChhHHHHHHhhhcCCCCCCCcCccccCCCcccc-ceeeCCCCEEEeehhhhcc
Q 009821          341 EVMRKARNELEQVVARDSVVEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLS-GYTIPKGSTIFINAWAIQR  419 (524)
Q Consensus       341 e~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~-g~~ip~G~~v~~~~~~~h~  419 (524)
                      |+|+||||||++++.....+|+|.+.+|+||++||+||||+||+++. +.|.+++|++++ ++.||||+.|+++++++||
T Consensus       326 dvQ~kLreEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~-~~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~  404 (499)
T KOG0158|consen  326 DVQDKLREEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPF-LNRECTKDYEIPGGFVIPKGTPVMIPTYALHH  404 (499)
T ss_pred             HHHHHHHHHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCccc-ccceecCceecCCCeEeCCCCEEEeecccccC
Confidence            99999999999997755459999999999999999999999999999 789999999999 9999999999999999999


Q ss_pred             CCCCCCCCCCCCCCccccccCCCcccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCCCCCccccc-
Q 009821          420 NPEVWENPQDFQPDRFLEDVKIGDFRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTKFDLSDKL-  498 (524)
Q Consensus       420 d~~~~~dp~~F~PeR~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~-  498 (524)
                      ||++||||++|+||||..++.+   ..++..|+|||.|||.|+|.+||++|+|++|++||++|+++..+. ..+. ... 
T Consensus       405 Dp~~~p~Pe~F~PERF~~~~~~---~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~-t~~~-~~~~  479 (499)
T KOG0158|consen  405 DPEYWPEPEKFKPERFEEENNK---SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPT-TIIP-LEGD  479 (499)
T ss_pred             CcccCCCcccCCCccCCCCccc---ccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCc-ccCc-ccCC
Confidence            9999999999999999976532   335689999999999999999999999999999999999998773 3322 444 


Q ss_pred             --ccccccCCCceeeeecCC
Q 009821          499 --LMALKKSEPLVVIPTPRS  516 (524)
Q Consensus       499 --~~~~~~~~~~~v~~~~r~  516 (524)
                        +.+..+++++++++++|.
T Consensus       480 ~~~~~l~pk~gi~Lkl~~r~  499 (499)
T KOG0158|consen  480 PKGFTLSPKGGIWLKLEPRD  499 (499)
T ss_pred             ccceeeecCCceEEEEEeCC
Confidence              778889999999999985


No 4  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=6.9e-79  Score=607.33  Aligned_cols=469  Identities=35%  Similarity=0.686  Sum_probs=379.1

Q ss_pred             CCCCCCCCCCCCCCCCceecccccCCCChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCccc
Q 009821           46 KPTRSTPPLPPGPRALPLVGNILSAEPNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSA  125 (524)
Q Consensus        46 ~~~~~~~~~ppgp~~~p~iG~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~  125 (524)
                      +.+++..+.||||.++|++||++.+..+++.++.+++++||++|++++|+.++++++||+.+++++.++...|.+++...
T Consensus        27 ~~~~~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~  106 (517)
T PLN02687         27 GSGKHKRPLPPGPRGWPVLGNLPQLGPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNS  106 (517)
T ss_pred             cCCCCCCCCCccCCCCCccccHHhcCCchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCcc
Confidence            33344556799999999999998887778999999999999999999999999999999999999998777788776543


Q ss_pred             chhhhcc-CCcccc--cCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhcc-CCCceehhHHHHHHHHHHHH
Q 009821          126 AASVLTY-GGKSIG--ASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGR-VGSPIKVGELMFLTSLDVAT  201 (524)
Q Consensus       126 ~~~~~~~-~~~~~~--~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~-~~~~vd~~~~~~~~~~dvi~  201 (524)
                      ....... ++..+.  +|+.|+++|+.+..+.|+.+.++.+.+.+.+++.++++.+... +++++|+.+.+..+++|+++
T Consensus       107 ~~~~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~vd~~~~~~~~t~dvi~  186 (517)
T PLN02687        107 GAEHMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQHGTAPVNLGQLVNVCTTNALG  186 (517)
T ss_pred             chhhhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHH
Confidence            3222221 112222  6999999999997578999999999999999999999998753 45789999999999999999


Q ss_pred             HHHhccCCCCCCchHHHHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCC
Q 009821          202 RMLWGASLRGEDWDAVAIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMN  281 (524)
Q Consensus       202 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~  281 (524)
                      ..+||.++...+.+.....+.+.+..+............+|++.++......++..+..+.+.+++.+.++++++.... 
T Consensus       187 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~-  265 (517)
T PLN02687        187 RAMVGRRVFAGDGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKAAGQT-  265 (517)
T ss_pred             HHHhCccccccCCcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHhccc-
Confidence            9999998754332223355666666665544332233456655544333334556667778888888888887654321 


Q ss_pred             CCCCcccHHHHHHHHhhc-----CCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcC
Q 009821          282 EGKSSKDFLQTLLELQQQ-----GDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVAR  356 (524)
Q Consensus       282 ~~~~~~d~l~~ll~~~~~-----~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~  356 (524)
                      +.....|+++.+++..++     ++..++++++.+++. .+++||+|||+++++|++++|++||++|+|+++|++++++.
T Consensus       266 ~~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~-~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~  344 (517)
T PLN02687        266 GSEEHKDLLSTLLALKREQQADGEGGRITDTEIKALLL-NLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVGR  344 (517)
T ss_pred             cCcccccHHHHHHHhhccccccccccCCCHHHHHHHHH-HHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCC
Confidence            123456999999986543     234689999999998 99999999999999999999999999999999999999987


Q ss_pred             CCcccccccCCChhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccc
Q 009821          357 DSVVEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFL  436 (524)
Q Consensus       357 ~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~  436 (524)
                      ++.++.+++.+|||++|||+|+||++|+++..++|.+.+|++++||.||+|+.|.++.+++||||++|+||++|+||||+
T Consensus       345 ~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeRfl  424 (517)
T PLN02687        345 DRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDRFL  424 (517)
T ss_pred             CCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchhcC
Confidence            77789999999999999999999999999987789999999999999999999999999999999999999999999999


Q ss_pred             cccCCC--cccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCCC---CCcccccccccccCCCceee
Q 009821          437 EDVKIG--DFRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTK---FDLSDKLLMALKKSEPLVVI  511 (524)
Q Consensus       437 ~~~~~~--~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~---~~~~~~~~~~~~~~~~~~v~  511 (524)
                      ++....  +....+..|+|||+|+|.|+|++||++|+++++++|+++|++++.++..   ++.....+.++.++.++.++
T Consensus       425 ~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  504 (517)
T PLN02687        425 PGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNMEEAYGLTLQRAVPLMVH  504 (517)
T ss_pred             CCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCcccccceeeecCCCeEEe
Confidence            643211  1112346899999999999999999999999999999999999887632   33333456666677889999


Q ss_pred             eecCC
Q 009821          512 PTPRS  516 (524)
Q Consensus       512 ~~~r~  516 (524)
                      +++|.
T Consensus       505 ~~~R~  509 (517)
T PLN02687        505 PRPRL  509 (517)
T ss_pred             eccCC
Confidence            99994


No 5  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=4.4e-78  Score=602.88  Aligned_cols=490  Identities=31%  Similarity=0.585  Sum_probs=387.1

Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCceecccccCCCChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHH
Q 009821           26 VVSILLAATFAISCYAWFIKKPTRSTPPLPPGPRALPLVGNILSAEPNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPS  105 (524)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ppgp~~~p~iG~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~  105 (524)
                      ++.++++++++.+++.++.+++.+++.+.||||.++|++||+..++.+++.++.+++++||++|++++|+.++++++||+
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ppgp~~~pl~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe   84 (514)
T PLN03112          5 LLSLLFSVLIFNVLIWRWLNASMRKSLRLPPGPPRWPIVGNLLQLGPLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPE   84 (514)
T ss_pred             HHHHHHHHHHHHHHHHHHccccccCCCCCccCCCCCCeeeeHHhcCCchHHHHHHHHHHhCCeEEEEecCccEEEECCHH
Confidence            34444444445444445555666677788999999999999988877789999999999999999999999999999999


Q ss_pred             HHHHHHHhccccccCCCcccchhhh-ccCCcc-c-ccCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhcc-
Q 009821          106 LAKQVLKEHDVVFANRDPSAAASVL-TYGGKS-I-GASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGR-  181 (524)
Q Consensus       106 ~i~~il~~~~~~~~~~~~~~~~~~~-~~~~~~-~-~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~-  181 (524)
                      ++++++.++...|.+++........ ...+.. + .+|+.|+++|+.+..+.|+...++.+.+.+.++++.+++.+.+. 
T Consensus        85 ~~~~vl~~~~~~f~~~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~  164 (514)
T PLN03112         85 LIREILLRQDDVFASRPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAA  164 (514)
T ss_pred             HHHHHHHhCCcccccCCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhh
Confidence            9999998877778776654322111 111222 2 27899999999977678999999999999999999999887653 


Q ss_pred             -CCCceehhHHHHHHHHHHHHHHHhccCCCCCCc--hHHHHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHH
Q 009821          182 -VGSPIKVGELMFLTSLDVATRMLWGASLRGEDW--DAVAIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKK  258 (524)
Q Consensus       182 -~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~  258 (524)
                       .++++|+.+.+..+++|++++++||.++.....  ......+...+..++...........+|.+.++...+..++..+
T Consensus       165 ~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  244 (514)
T PLN03112        165 QTGKPVNLREVLGAFSMNNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMRE  244 (514)
T ss_pred             ccCCeeeHHHHHHHHHHHHHHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHHH
Confidence             467899999999999999999999998743221  11334566666665544333233345565544433334456667


Q ss_pred             HHHHHHHHHHHhhccccCCCCCCC-CCCcccHHHHHHHHhhcCC-CCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHH
Q 009821          259 LTVRLDKIFESLLRPGQSGQDMNE-GKSSKDFLQTLLELQQQGD-YSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSEL  336 (524)
Q Consensus       259 ~~~~l~~~~~~~i~~~~~~~~~~~-~~~~~d~l~~ll~~~~~~~-~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L  336 (524)
                      ..+.+.+++.+.++++++..+... .....|+++.++++..+++ ..++++++.+++. .+++||+||||++++|++++|
T Consensus       245 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~-~~~~AG~dTTa~~l~~~l~~L  323 (514)
T PLN03112        245 VEKRVDEFHDKIIDEHRRARSGKLPGGKDMDFVDVLLSLPGENGKEHMDDVEIKALMQ-DMIAAATDTSAVTNEWAMAEV  323 (514)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcccccCCccchHHHHHHHhhccccccCCCHHHHHHHHH-HHhccccccHHHHHHHHHHHH
Confidence            777788888888877655322111 1234699999998654433 3589999999998 999999999999999999999


Q ss_pred             hhCcHHHHHHHHHHHHhhcCCCcccccccCCChhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhh
Q 009821          337 LQKPEVMRKARNELEQVVARDSVVEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWA  416 (524)
Q Consensus       337 ~~~pe~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~  416 (524)
                      ++||++|+|+|+|++++++.++.++.+++.+|||++|||+||+|++|++++.++|.+.+|++++||.||||+.|.+++++
T Consensus       324 ~~~P~vq~kl~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~  403 (514)
T PLN03112        324 IKNPRVLRKIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTHG  403 (514)
T ss_pred             HhChHHHHHHHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehHH
Confidence            99999999999999999987777899999999999999999999999999867899999999999999999999999999


Q ss_pred             hccCCCCCCCCCCCCCCccccccCCC-c-ccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCC---C
Q 009821          417 IQRNPEVWENPQDFQPDRFLEDVKIG-D-FRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGT---K  491 (524)
Q Consensus       417 ~h~d~~~~~dp~~F~PeR~~~~~~~~-~-~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~---~  491 (524)
                      +||||++|+||++||||||..+.+.. . .......|+|||+|+|+|||++||++|+++++++|+++||+++.++.   .
T Consensus       404 ~h~d~~~~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~  483 (514)
T PLN03112        404 LGRNTKIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRPED  483 (514)
T ss_pred             hhCCcccCCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCccc
Confidence            99999999999999999986532211 1 01224579999999999999999999999999999999999987653   2


Q ss_pred             CCcccccccccccCCCceeeeecCC
Q 009821          492 FDLSDKLLMALKKSEPLVVIPTPRS  516 (524)
Q Consensus       492 ~~~~~~~~~~~~~~~~~~v~~~~r~  516 (524)
                      +......++++.+++++.+++++|.
T Consensus       484 ~~~~~~~~~~~~~~~~~~~~~~~r~  508 (514)
T PLN03112        484 IDTQEVYGMTMPKAKPLRAVATPRL  508 (514)
T ss_pred             CCCccccCcccccCCCeEEEeecCC
Confidence            3333445677777889999999995


No 6  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=3e-78  Score=602.37  Aligned_cols=461  Identities=33%  Similarity=0.620  Sum_probs=371.9

Q ss_pred             CCCCCCCCCCCCceecccccCCC-ChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCcccchh
Q 009821           50 STPPLPPGPRALPLVGNILSAEP-NLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAAAS  128 (524)
Q Consensus        50 ~~~~~ppgp~~~p~iG~~~~~~~-~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~~  128 (524)
                      ++.+.||||.++|++||+..+.. +++.++.+++++||++|++++|+.++|+++||+++++++.++...|.+++......
T Consensus        25 ~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~~~  104 (499)
T PLN03234         25 KSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQ  104 (499)
T ss_pred             CCCCCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCchhhh
Confidence            44567999999999999988854 68889999999999999999999999999999999999998877788776543322


Q ss_pred             hhccCCcc--cc-cCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhcc--CCCceehhHHHHHHHHHHHHHH
Q 009821          129 VLTYGGKS--IG-ASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGR--VGSPIKVGELMFLTSLDVATRM  203 (524)
Q Consensus       129 ~~~~~~~~--~~-~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~--~~~~vd~~~~~~~~~~dvi~~~  203 (524)
                      .....+..  .. .++.|+++|+.+..+.|++..++.+.+.+.+.++++++.+.+.  .++++|+.+.+..+++|+++++
T Consensus       105 ~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vd~~~~~~~~t~dvi~~~  184 (499)
T PLN03234        105 TMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLLSFTNCVVCRQ  184 (499)
T ss_pred             hhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccCCCeEEHHHHHHHHHHHHHHHH
Confidence            22211111  22 5679999999865589999999999999999999999998643  4678999999999999999999


Q ss_pred             HhccCCCCCCchHHHHHHHHHHHHHHHHhcCCCcccccccccccC-ccchHHHHHHHHHHHHHHHHHhhccccCCCCCCC
Q 009821          204 LWGASLRGEDWDAVAIQFREVLEEMFQVLGSGNISDLFPLLTRFD-LQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNE  282 (524)
Q Consensus       204 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~-~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~  282 (524)
                      +||.+++....  ....+.+.+.+.............+|++..+. ..+..++..++.+.+.+++.+.++++++... . 
T Consensus       185 ~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~-  260 (499)
T PLN03234        185 AFGKRYNEYGT--EMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDPNR-P-  260 (499)
T ss_pred             HhCCcccccch--hHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc-c-
Confidence            99998865432  23445555555443333223334455543221 1233466778888999999999888654322 1 


Q ss_pred             CCCcccHHHHHHHHhhcCC--CCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcc
Q 009821          283 GKSSKDFLQTLLELQQQGD--YSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVV  360 (524)
Q Consensus       283 ~~~~~d~l~~ll~~~~~~~--~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~  360 (524)
                      .....|+++.+++..++++  ..++++++.+++. .+++||+||||++++|++++|++||++|+|+|+|+++++++++.+
T Consensus       261 ~~~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~-~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~  339 (499)
T PLN03234        261 KQETESFIDLLMQIYKDQPFSIKFTHENVKAMIL-DIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGDKGYV  339 (499)
T ss_pred             CCCcccHHHHHHHHhhccCcCCCCCHHHHHHHHH-HHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCC
Confidence            2245689999987654322  3589999999999 999999999999999999999999999999999999999877778


Q ss_pred             cccccCCChhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCC-CCCCCCCCCcccccc
Q 009821          361 EEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLEDV  439 (524)
Q Consensus       361 ~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~-~dp~~F~PeR~~~~~  439 (524)
                      +.+++.+|||++|||+|+||++|++++.++|.+.+|++++||.|||||.|.++++++||||++| +||++||||||+++.
T Consensus       340 ~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~PeR~l~~~  419 (499)
T PLN03234        340 SEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMKEH  419 (499)
T ss_pred             CHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCChhhcCchhhcCCC
Confidence            9999999999999999999999999986689999999999999999999999999999999999 899999999999654


Q ss_pred             CCCcccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCC---CCCcccccccccccCCCceeeeecC
Q 009821          440 KIGDFRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGT---KFDLSDKLLMALKKSEPLVVIPTPR  515 (524)
Q Consensus       440 ~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~r  515 (524)
                      ...+....+..|+|||+|+|+|||+++|+.|+++++|.|+++|++++.++.   .+......+++..++..+++.+++|
T Consensus       420 ~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  498 (499)
T PLN03234        420 KGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKEHLVLAPTKH  498 (499)
T ss_pred             CCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCcccccccccccCCCeEEEeecC
Confidence            321222345689999999999999999999999999999999999998762   2344445567777888888888876


No 7  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=8.4e-78  Score=595.64  Aligned_cols=462  Identities=32%  Similarity=0.629  Sum_probs=374.9

Q ss_pred             CCCCCCCCCCCceecccccCCCChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCcccchhh-
Q 009821           51 TPPLPPGPRALPLVGNILSAEPNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAAASV-  129 (524)
Q Consensus        51 ~~~~ppgp~~~p~iG~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~~~-  129 (524)
                      ..+.||||+++|++|++..++.+++.++.+++++||++|++++|+.++|+++||+++++++.++...|.+++....... 
T Consensus        29 ~~~~pPgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~~~~~~~  108 (504)
T PLN00110         29 SRKLPPGPRGWPLLGALPLLGNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFSNRPPNAGATHL  108 (504)
T ss_pred             cCCCcccCCCCCeeechhhcCCchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhhcCCCCccchhhh
Confidence            4457999999999999888776788999999999999999999999999999999999999988777888765432221 


Q ss_pred             hccCCcccc--cCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhcc--CCCceehhHHHHHHHHHHHHHHHh
Q 009821          130 LTYGGKSIG--ASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGR--VGSPIKVGELMFLTSLDVATRMLW  205 (524)
Q Consensus       130 ~~~~~~~~~--~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~--~~~~vd~~~~~~~~~~dvi~~~~f  205 (524)
                      ....+.++.  +|+.|+++|+.+..+.|+.+.++.+.+.+.+++..+++.+.+.  .|+++|+.+.+..+++|+|++++|
T Consensus       109 ~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~vi~~~~f  188 (504)
T PLN00110        109 AYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQRGEPVVVPEMLTFSMANMIGQVIL  188 (504)
T ss_pred             ccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhccCCCcEeHHHHHHHHHHHHHHHHHh
Confidence            111222332  7999999999997568999999999999999998888887653  567899999999999999999999


Q ss_pred             ccCCCCCCchHHHHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCC
Q 009821          206 GASLRGEDWDAVAIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKS  285 (524)
Q Consensus       206 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~  285 (524)
                      |.++...... ...++...+...+..........++|++.++......+...+..+.+.+++.+.++++++...  ....
T Consensus       189 g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~  265 (504)
T PLN00110        189 SRRVFETKGS-ESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDKLLTRMIEEHTASAH--ERKG  265 (504)
T ss_pred             CCcccccCch-hHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcc--cccc
Confidence            9987322211 235577777666554443333456666554432334455666677788888787777654322  1123


Q ss_pred             cccHHHHHHHHhhc-CCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcccccc
Q 009821          286 SKDFLQTLLELQQQ-GDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFH  364 (524)
Q Consensus       286 ~~d~l~~ll~~~~~-~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~~  364 (524)
                      ..|+++.+++..+. ++..++++++.++++ .+++||+|||+++++|++++|++||++|+|+++|++++++.++.+++++
T Consensus       266 ~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~-~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~  344 (504)
T PLN00110        266 NPDFLDVVMANQENSTGEKLTLTNIKALLL-NLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGRNRRLVESD  344 (504)
T ss_pred             CCChhhHHhhcccccCCCCCCHHHHHHHHH-hhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHH
Confidence            46899999976432 335689999999999 9999999999999999999999999999999999999998767789999


Q ss_pred             cCCChhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCC-c
Q 009821          365 LAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIG-D  443 (524)
Q Consensus       365 l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~-~  443 (524)
                      +++|||++|||+||||++|++++.++|.+.+|++++||.||||+.|.++++++||||++|+||++|+||||+++.... +
T Consensus       345 ~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~~~~~~~~  424 (504)
T PLN00110        345 LPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPERFLSEKNAKID  424 (504)
T ss_pred             hhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcCChhhcCCcccCCcccccCCCCcccc
Confidence            999999999999999999999987789999999999999999999999999999999999999999999999643211 1


Q ss_pred             ccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCCCCCcccccccccccCCCceeeeecCC
Q 009821          444 FRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTKFDLSDKLLMALKKSEPLVVIPTPRS  516 (524)
Q Consensus       444 ~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  516 (524)
                      .......|+|||+|+|.|+|++||++|+++++++|+++|++++.++.+.+.....++++.++.++++++++|.
T Consensus       425 ~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  497 (504)
T PLN00110        425 PRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGVELNMDEAFGLALQKAVPLSAMVTPRL  497 (504)
T ss_pred             cCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCCccCcccccccccccCCCceEeeccCC
Confidence            1112357999999999999999999999999999999999999877555544456778888899999999995


No 8  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=5.4e-78  Score=600.75  Aligned_cols=455  Identities=36%  Similarity=0.684  Sum_probs=358.6

Q ss_pred             CCCCCCCCCCceecccccCCCChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCcccchhhhc
Q 009821           52 PPLPPGPRALPLVGNILSAEPNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAAASVLT  131 (524)
Q Consensus        52 ~~~ppgp~~~p~iG~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~~~~~  131 (524)
                      .+.||||+++|++|+++.+....+.++.+|+++||++|++++|+.++|+++||+++++++.++...|+.++.........
T Consensus        35 ~~~ppgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~~~~  114 (516)
T PLN02183         35 LPYPPGPKGLPIIGNMLMMDQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAISYLT  114 (516)
T ss_pred             CCCCcCCCCCCeeccHHhcCCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccchhccc
Confidence            46799999999999998776666788999999999999999999999999999999999998777777775433222221


Q ss_pred             cC-Ccccc--cCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHHHHHHhccC
Q 009821          132 YG-GKSIG--ASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVGELMFLTSLDVATRMLWGAS  208 (524)
Q Consensus       132 ~~-~~~~~--~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~  208 (524)
                      .+ +.++.  +|+.|+++|+.+..+.|+.+.++.+.+.+ +++..+++.+....++++|+.+.+..+++|++++++||..
T Consensus       115 ~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~-~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~vi~~~~fG~~  193 (516)
T PLN02183        115 YDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASVR-DEVDSMVRSVSSNIGKPVNIGELIFTLTRNITYRAAFGSS  193 (516)
T ss_pred             cCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHHH-HHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHhHhhcCc
Confidence            11 22232  79999999999655889999998888864 5788888888654567899999999999999999999987


Q ss_pred             CCCCCchHHHHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCC-----CC
Q 009821          209 LRGEDWDAVAIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMN-----EG  283 (524)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~-----~~  283 (524)
                      ++...     .++.+.+..+............+|++.++......++..+..+.+.+++.+.+++++++....     +.
T Consensus       194 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  268 (516)
T PLN02183        194 SNEGQ-----DEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKRKNQNADNDSE  268 (516)
T ss_pred             ccchH-----HHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccc
Confidence            65421     345555555444333333445566655432223345666677777777777776654321100     11


Q ss_pred             CCcccHHHHHHHHhhcC-----------CCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHH
Q 009821          284 KSSKDFLQTLLELQQQG-----------DYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQ  352 (524)
Q Consensus       284 ~~~~d~l~~ll~~~~~~-----------~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~  352 (524)
                      ....|+++.+++...++           +..++++++.+++. .+++||+|||+++++|++++|++||++|+|+|+|+++
T Consensus       269 ~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~-~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~Ei~~  347 (516)
T PLN02183        269 EAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIM-DVMFGGTETVASAIEWAMAELMKSPEDLKRVQQELAD  347 (516)
T ss_pred             cccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHH-HHHHcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence            23468999999854321           12588999999998 9999999999999999999999999999999999999


Q ss_pred             hhcCCCcccccccCCChhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCC
Q 009821          353 VVARDSVVEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQP  432 (524)
Q Consensus       353 ~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~P  432 (524)
                      +++.++.++.+++.+|||++|||+||||++|++|+. .|.+.+|++++||.||||+.|.++++++||||++|+||++|+|
T Consensus       348 v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~-~r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~~~dP~~F~P  426 (516)
T PLN02183        348 VVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLL-LHETAEDAEVAGYFIPKRSRVMINAWAIGRDKNSWEDPDTFKP  426 (516)
T ss_pred             HcCCCCCCCHHHhccChHHHHHHHHHhccCCCccce-eeeccCceeECCEEECCCCEEEEehhhhcCCccccCCccccCc
Confidence            998666789999999999999999999999999994 6999999999999999999999999999999999999999999


Q ss_pred             CccccccCCCcccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCCC---CCcccccccccccCCCce
Q 009821          433 DRFLEDVKIGDFRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTK---FDLSDKLLMALKKSEPLV  509 (524)
Q Consensus       433 eR~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~---~~~~~~~~~~~~~~~~~~  509 (524)
                      |||++++.. +...+...|+|||+|+|+|+|++||++|+++++|+|+++|++++.+|..   .+.....+.+..++.++.
T Consensus       427 eRfl~~~~~-~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  505 (516)
T PLN02183        427 SRFLKPGVP-DFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELDMNDVFGLTAPRATRLV  505 (516)
T ss_pred             hhhCCCCCc-cccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCChhhccccccccCCCcE
Confidence            999964321 1122446899999999999999999999999999999999999887642   222223344444556788


Q ss_pred             eeeecC
Q 009821          510 VIPTPR  515 (524)
Q Consensus       510 v~~~~r  515 (524)
                      +.+++|
T Consensus       506 ~~~~~r  511 (516)
T PLN02183        506 AVPTYR  511 (516)
T ss_pred             EEeecC
Confidence            888877


No 9  
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=1e-76  Score=588.82  Aligned_cols=451  Identities=23%  Similarity=0.373  Sum_probs=358.0

Q ss_pred             CCCCCCCCCCCCceecccccCCCChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCcccchhh
Q 009821           50 STPPLPPGPRALPLVGNILSAEPNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAAASV  129 (524)
Q Consensus        50 ~~~~~ppgp~~~p~iG~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~~~  129 (524)
                      .....+|||+++|++||++.+..+++..+.+++++||++|++++|+.++|+++||+.+++++.++...|.+++.......
T Consensus        26 ~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~~~  105 (482)
T PTZ00404         26 IHKNELKGPIPIPILGNLHQLGNLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPSIKH  105 (482)
T ss_pred             ccCCCCCCCCCCCeeccHhhhcccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCcceeee
Confidence            44566899999999999988877889999999999999999999999999999999999999887656766654332211


Q ss_pred             -hccCCcccccCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhcc--CCCceehhHHHHHHHHHHHHHHHhc
Q 009821          130 -LTYGGKSIGASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGR--VGSPIKVGELMFLTSLDVATRMLWG  206 (524)
Q Consensus       130 -~~~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~--~~~~vd~~~~~~~~~~dvi~~~~fG  206 (524)
                       ....+....+|+.|+++|+.+. +.|+...++.+.+.+.+.++.+++.+.+.  .++.+|+.+.+..+++|+++.++||
T Consensus       106 ~~~~~~l~~~~g~~w~~~Rk~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG  184 (482)
T PTZ00404        106 GTFYHGIVTSSGEYWKRNREIVG-KAMRKTNLKHIYDLLDDQVDVLIESMKKIESSGETFEPRYYLTKFTMSAMFKYIFN  184 (482)
T ss_pred             eccCCceeccChHHHHHHHHHHH-HHHhhhccccHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHhc
Confidence             1122223338999999999996 88999999999999999999999988653  4667999999999999999999999


Q ss_pred             cCCCCCCc--hHHHHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCC
Q 009821          207 ASLRGEDW--DAVAIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGK  284 (524)
Q Consensus       207 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~  284 (524)
                      .+++..+.  ......+...+..++...........++++.... ..+.....+..+.+.+++.+.+++++++.+   ..
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~  260 (482)
T PTZ00404        185 EDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPLY-YQYLEHTDKNFKKIKKFIKEKYHEHLKTID---PE  260 (482)
T ss_pred             cccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHccC---CC
Confidence            98864321  1123456666666655444332222333222111 111223344566777777777766554322   22


Q ss_pred             CcccHHHHHHHHhhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcccccc
Q 009821          285 SSKDFLQTLLELQQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFH  364 (524)
Q Consensus       285 ~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~~  364 (524)
                      ...|+++.++++..+. ...+.+++++++. .+++||+|||+++++|++++|++||++|+|+++|++++++.+..+++++
T Consensus       261 ~~~dll~~ll~~~~~~-~~~~~~~i~~~~~-~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~  338 (482)
T PTZ00404        261 VPRDLLDLLIKEYGTN-TDDDILSILATIL-DFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNGRNKVLLSD  338 (482)
T ss_pred             CcccHHHHHHHHhccC-CcccHHHHHHHHH-HHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcCCCCCCccc
Confidence            3569999999875321 1122334778888 9999999999999999999999999999999999999998766789999


Q ss_pred             cCCChhHHHHHHhhhcCCCCCCCcCccccCCCccc-cceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCc
Q 009821          365 LAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNL-SGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGD  443 (524)
Q Consensus       365 l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~-~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~  443 (524)
                      +++|||++|||+||||++|++++.++|.+.+|+++ +||.||||+.|.++.+++||||++||||++||||||++..    
T Consensus       339 l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~PeRwl~~~----  414 (482)
T PTZ00404        339 RQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPSRFLNPD----  414 (482)
T ss_pred             cccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCCccccCccccCCCC----
Confidence            99999999999999999999997678999999999 9999999999999999999999999999999999998531    


Q ss_pred             ccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCCCCCcccccccccccCCCceeeeecC
Q 009821          444 FRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTKFDLSDKLLMALKKSEPLVVIPTPR  515 (524)
Q Consensus       444 ~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  515 (524)
                         .+..|+|||+|+|.|||++||.+|+++++++|+++|++++.++.+.+.....+.++. +.+++|.+++|
T Consensus       415 ---~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~R  482 (482)
T PTZ00404        415 ---SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKKIDETEEYGLTLK-PNKFKVLLEKR  482 (482)
T ss_pred             ---CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCCCCcccccceeec-CCCceeeeecC
Confidence               246899999999999999999999999999999999999877755444444566666 56799999887


No 10 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=1.2e-76  Score=591.50  Aligned_cols=462  Identities=31%  Similarity=0.531  Sum_probs=352.4

Q ss_pred             CCCCCCCCCCCCceecccccCCCC-hhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCcccchh
Q 009821           50 STPPLPPGPRALPLVGNILSAEPN-LHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAAAS  128 (524)
Q Consensus        50 ~~~~~ppgp~~~p~iG~~~~~~~~-~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~~  128 (524)
                      ++.+.||||++.|++|++..++.+ .+..+.+++++||++|++++|+.++|+++||+.+++++.++...+.+++......
T Consensus        27 ~~~~~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~~~  106 (503)
T PLN02394         27 KKLKLPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFD  106 (503)
T ss_pred             CcCCCCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcchHh
Confidence            345689999999999999887544 5789999999999999999999999999999999999988776677665433333


Q ss_pred             hhccCC-cccc--cCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhcc---CCCceehhHHHHHHHHHHHHH
Q 009821          129 VLTYGG-KSIG--ASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGR---VGSPIKVGELMFLTSLDVATR  202 (524)
Q Consensus       129 ~~~~~~-~~~~--~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~---~~~~vd~~~~~~~~~~dvi~~  202 (524)
                      .+...+ ..+.  +|+.|+++||.+..+.|+.+.++.+.+.+.++++++++.+...   .++.+|+.+.+..+++|++++
T Consensus       107 ~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~dvi~~  186 (503)
T PLN02394        107 IFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMYNIMYR  186 (503)
T ss_pred             HhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHHHHHHHH
Confidence            332222 2222  7899999999986688999999999999999999999988753   245699999999999999999


Q ss_pred             HHhccCCCCCCchHHHHHHHHHHHHHHHHhcC--CCcccccccccccCccchHHHHHHHHHHHHH-HHHHhhccccCCCC
Q 009821          203 MLWGASLRGEDWDAVAIQFREVLEEMFQVLGS--GNISDLFPLLTRFDLQGLESKAKKLTVRLDK-IFESLLRPGQSGQD  279 (524)
Q Consensus       203 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~-~~~~~i~~~~~~~~  279 (524)
                      ++||.+++..... ....+.....+.......  ......+|++.+.. ....+...+....... +....++++++..+
T Consensus       187 ~~fG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  264 (503)
T PLN02394        187 MMFDRRFESEDDP-LFLKLKALNGERSRLAQSFEYNYGDFIPILRPFL-RGYLKICQDVKERRLALFKDYFVDERKKLMS  264 (503)
T ss_pred             HHhCCCcccccch-hHHHHHHHHHHHHHHhcccccchhhhchHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999998654322 222222222222222111  11223344433211 1111222222222222 22333444432111


Q ss_pred             C--CCCCCcccHHHHHHHHhhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCC
Q 009821          280 M--NEGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARD  357 (524)
Q Consensus       280 ~--~~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~  357 (524)
                      .  .+.+...|+++.+++..++  ..++++++..++. .+++||+||||++++|++++|++||++|+|||+||+++++.+
T Consensus       265 ~~~~~~~~~~d~l~~ll~~~~~--~~l~~~~i~~~~~-~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~  341 (503)
T PLN02394        265 AKGMDKEGLKCAIDHILEAQKK--GEINEDNVLYIVE-NINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLGPG  341 (503)
T ss_pred             hccCCcchhhhHHHHHHhcccc--CCCCHHHHHHHHH-HHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCC
Confidence            0  0122357899999987643  3588999998888 999999999999999999999999999999999999999876


Q ss_pred             CcccccccCCChhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCcccc
Q 009821          358 SVVEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLE  437 (524)
Q Consensus       358 ~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~  437 (524)
                      +.++++++++||||+|||+|+||++|++|+..+|.+.+|++++||.||+||.|.+++|++||||++|+||++||||||++
T Consensus       342 ~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~PeRwl~  421 (503)
T PLN02394        342 NQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEFRPERFLE  421 (503)
T ss_pred             CCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCccccCccccCC
Confidence            67889999999999999999999999999977899999999999999999999999999999999999999999999996


Q ss_pred             ccCCCcccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCC-CCCcccccc-cccccCCCceeeeecC
Q 009821          438 DVKIGDFRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGT-KFDLSDKLL-MALKKSEPLVVIPTPR  515 (524)
Q Consensus       438 ~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~-~~~~~~~~~~v~~~~r  515 (524)
                      +++..+.......|+|||+|+|+|||++||.+|+++++|+|+++|++++.+|. .++.....+ .....+.+++|+++||
T Consensus       422 ~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  501 (503)
T PLN02394        422 EEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQSKIDVSEKGGQFSLHIAKHSTVVFKPR  501 (503)
T ss_pred             CCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCCcCccccccCceeeccCCCceEEeecC
Confidence            53221112235689999999999999999999999999999999999988775 355544443 4554567999999999


Q ss_pred             C
Q 009821          516 S  516 (524)
Q Consensus       516 ~  516 (524)
                      +
T Consensus       502 ~  502 (503)
T PLN02394        502 S  502 (503)
T ss_pred             C
Confidence            6


No 11 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=2.8e-76  Score=588.86  Aligned_cols=464  Identities=27%  Similarity=0.469  Sum_probs=362.8

Q ss_pred             CCCCCCCCCCCCCceecccccCC---CChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCccc
Q 009821           49 RSTPPLPPGPRALPLVGNILSAE---PNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSA  125 (524)
Q Consensus        49 ~~~~~~ppgp~~~p~iG~~~~~~---~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~  125 (524)
                      ++..++||||+++|++||+..+.   .+++.++.+++++||++|++++|+.++++++||+++++++.++...|..++...
T Consensus        31 ~~~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~  110 (519)
T PLN00168         31 KKGRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVA  110 (519)
T ss_pred             CCCCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCccc
Confidence            34556799999999999987653   357888999999999999999999999999999999999998877787776543


Q ss_pred             chhhhccCCccc---ccCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhcc--CCCceehhHHHHHHHHHHH
Q 009821          126 AASVLTYGGKSI---GASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGR--VGSPIKVGELMFLTSLDVA  200 (524)
Q Consensus       126 ~~~~~~~~~~~~---~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~--~~~~vd~~~~~~~~~~dvi  200 (524)
                      ....++.++..+   .+|+.|+++||.+..++|+.+.++.+.+.+.++++.+++.+.+.  .++.+|+.+.+..++.+++
T Consensus       111 ~~~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~ii  190 (519)
T PLN00168        111 SSRLLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAEDAAAPRVVETFQYAMFCLL  190 (519)
T ss_pred             chhhhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHH
Confidence            333333222222   37999999998766699999999999999999999999998753  3356899999999999999


Q ss_pred             HHHHhccCCCCCCchHHHHHHHHHHHHHHHHh-cCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCC
Q 009821          201 TRMLWGASLRGEDWDAVAIQFREVLEEMFQVL-GSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQD  279 (524)
Q Consensus       201 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~  279 (524)
                      +.++||.+++...    ...+........... ........+|.+.+.......++..+..+.+.+++.+.++++++...
T Consensus       191 ~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  266 (519)
T PLN00168        191 VLMCFGERLDEPA----VRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPLIDARREYKN  266 (519)
T ss_pred             HHHHcCCCcChhh----HHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999999876322    123333333322212 12223345564432211122344556677777888877776654321


Q ss_pred             ---C-C-CC----CCcccHHHHHHHHhh--cCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHH
Q 009821          280 ---M-N-EG----KSSKDFLQTLLELQQ--QGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARN  348 (524)
Q Consensus       280 ---~-~-~~----~~~~d~l~~ll~~~~--~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~  348 (524)
                         . . +.    ....|+++.|++...  +++..++++++.++++ ++++||+|||+++++|++++|++||++|+|+++
T Consensus       267 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~-~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~~  345 (519)
T PLN00168        267 HLGQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCS-EFLNAGTDTTSTALQWIMAELVKNPSIQSKLHD  345 (519)
T ss_pred             hccccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHH-HHHHhcchHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence               0 0 00    124689999997643  2234689999999999 999999999999999999999999999999999


Q ss_pred             HHHHhhcCC-CcccccccCCChhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCC
Q 009821          349 ELEQVVARD-SVVEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENP  427 (524)
Q Consensus       349 Ei~~~~~~~-~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp  427 (524)
                      ||+++++.+ +.++.+++.+|||++|||+||||++|+++..++|.+.+|++++||.||||+.|.++++++||||++||||
T Consensus       346 Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~~p  425 (519)
T PLN00168        346 EIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDEREWERP  425 (519)
T ss_pred             HHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcCccccCCc
Confidence            999999753 5689999999999999999999999999987789999999999999999999999999999999999999


Q ss_pred             CCCCCCccccccCC--Ccc-cCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCCCCCccccccccccc
Q 009821          428 QDFQPDRFLEDVKI--GDF-RGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTKFDLSDKLLMALKK  504 (524)
Q Consensus       428 ~~F~PeR~~~~~~~--~~~-~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~  504 (524)
                      ++|+||||++....  .+. ..++..|+|||+|+|+|||++||.+|+++++++|+++|+|++.++.+++.....+++..+
T Consensus       426 ~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~  505 (519)
T PLN00168        426 MEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGDEVDFAEKREFTTVM  505 (519)
T ss_pred             cccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCCcCChhhhceeEEee
Confidence            99999999964211  111 123457999999999999999999999999999999999998876544443333455666


Q ss_pred             CCCceeeeecCCC
Q 009821          505 SEPLVVIPTPRSL  517 (524)
Q Consensus       505 ~~~~~v~~~~r~~  517 (524)
                      +.++++++++|+.
T Consensus       506 ~~~~~~~~~~R~~  518 (519)
T PLN00168        506 AKPLRARLVPRRT  518 (519)
T ss_pred             cCCcEEEEEeccC
Confidence            7789999999975


No 12 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=8.3e-76  Score=583.63  Aligned_cols=459  Identities=32%  Similarity=0.610  Sum_probs=355.2

Q ss_pred             CCCCCCCCCCCceecccccC-CCChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCcccchhh
Q 009821           51 TPPLPPGPRALPLVGNILSA-EPNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAAASV  129 (524)
Q Consensus        51 ~~~~ppgp~~~p~iG~~~~~-~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~~~  129 (524)
                      ..+.||||+++|++||++.+ ..+++.++.+|+++||++|++++|+.++|+++||+.+++++.++...|.+++.......
T Consensus        27 ~~~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~~~~~  106 (502)
T PLN02966         27 RYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRGHEF  106 (502)
T ss_pred             CCCCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCCcccee
Confidence            44679999999999999887 44688999999999999999999999999999999999999987766766554322222


Q ss_pred             hccCC--cccc-cCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhcc--CCCceehhHHHHHHHHHHHHHHH
Q 009821          130 LTYGG--KSIG-ASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGR--VGSPIKVGELMFLTSLDVATRML  204 (524)
Q Consensus       130 ~~~~~--~~~~-~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~--~~~~vd~~~~~~~~~~dvi~~~~  204 (524)
                      ...+.  .... .|+.|+.+|+.+..+.|+...+..+.+.+.+.+.++++.+.+.  +++++|+.+.+..+++|++++++
T Consensus       107 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~t~dvi~~~~  186 (502)
T PLN02966        107 ISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTNSVVCRQA  186 (502)
T ss_pred             eccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHHHHHHH
Confidence            11111  1122 6899999999955689999999999999999999999998653  45689999999999999999999


Q ss_pred             hccCCCCCCchHHHHHHHHHHHHHHHHhcCCCcccccccccccC-ccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCC
Q 009821          205 WGASLRGEDWDAVAIQFREVLEEMFQVLGSGNISDLFPLLTRFD-LQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEG  283 (524)
Q Consensus       205 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~-~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~  283 (524)
                      ||.+++..+.  ....+.+.+..............++|++..+. .....+......+...+++.+.++++.+... . .
T Consensus       187 fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~-~  262 (502)
T PLN02966        187 FGKKYNEDGE--EMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPKR-V-K  262 (502)
T ss_pred             hCCccCccch--HHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhccc-c-c
Confidence            9999875432  23445555555444444333344455432221 1122233333444555555555554432211 0 1


Q ss_pred             CCcccHHHHHHHHhhcC--CCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCC--Cc
Q 009821          284 KSSKDFLQTLLELQQQG--DYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARD--SV  359 (524)
Q Consensus       284 ~~~~d~l~~ll~~~~~~--~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~--~~  359 (524)
                      ....|+++.+++..+++  +..++++++.++++ .+++||+|||+++++|++++|++||++|+|+|+|++++++.+  +.
T Consensus       263 ~~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~-~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~  341 (502)
T PLN02966        263 PETESMIDLLMEIYKEQPFASEFTVDNVKAVIL-DIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEKGSTF  341 (502)
T ss_pred             cccccHHHHHHHHHhccCcCCCCCHHHHHHHHH-HHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccCCCc
Confidence            23468999999766543  24588999999998 999999999999999999999999999999999999998742  45


Q ss_pred             ccccccCCChhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCC-CCCCCCCCCccccc
Q 009821          360 VEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLED  438 (524)
Q Consensus       360 ~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~-~dp~~F~PeR~~~~  438 (524)
                      ++++|+.+|||++|||+|+||++|++++..+|.+.+|++++||.|||||.|.++++++||||++| |||++|+||||+++
T Consensus       342 ~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeRwl~~  421 (502)
T PLN02966        342 VTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLEK  421 (502)
T ss_pred             CCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccCChhhCChhhhcCC
Confidence            78999999999999999999999999986689999999999999999999999999999999999 99999999999964


Q ss_pred             cCCCcccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCCC---CCcccccccccccCCCceeeeecC
Q 009821          439 VKIGDFRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTK---FDLSDKLLMALKKSEPLVVIPTPR  515 (524)
Q Consensus       439 ~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~---~~~~~~~~~~~~~~~~~~v~~~~r  515 (524)
                      +..  ....+..|+|||+|+|+|+|++||.+|+++++|+|+++|+|++.++.+   ++.+...++...++..++++.++.
T Consensus       422 ~~~--~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  499 (502)
T PLN02966        422 EVD--FKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDDINMDVMTGLAMHKSQHLKLVPEKV  499 (502)
T ss_pred             CCC--cCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCcccCCcccccCeeeccCCCeEEEEEeC
Confidence            321  122356899999999999999999999999999999999999987742   333334455554545666555544


Q ss_pred             C
Q 009821          516 S  516 (524)
Q Consensus       516 ~  516 (524)
                      +
T Consensus       500 ~  500 (502)
T PLN02966        500 N  500 (502)
T ss_pred             C
Confidence            3


No 13 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=1.1e-75  Score=575.08  Aligned_cols=452  Identities=28%  Similarity=0.463  Sum_probs=357.5

Q ss_pred             CCCCCCCCCCCceecccccCC---CChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCccc-c
Q 009821           51 TPPLPPGPRALPLVGNILSAE---PNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSA-A  126 (524)
Q Consensus        51 ~~~~ppgp~~~p~iG~~~~~~---~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~-~  126 (524)
                      ....||||.++|++|++..+.   .+...++.++..+||++|+.|+|+.++++++||+.+++|+.++.....+.+.+. .
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~  112 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES  112 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence            455799999999999998873   356778899999999999999999999999999999999975554454444433 3


Q ss_pred             hhhhccCCcccccCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhcc-CCCceehhHHHHHHHHHHHHHHHh
Q 009821          127 ASVLTYGGKSIGASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGR-VGSPIKVGELMFLTSLDVATRMLW  205 (524)
Q Consensus       127 ~~~~~~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~-~~~~vd~~~~~~~~~~dvi~~~~f  205 (524)
                      ...+.++|....+|+.|+++||.+. +.|+...++.+...+.++...+...+... .+..||+++.+.++++|+|+.++|
T Consensus       113 ~~~~lG~gll~~~g~~W~~~Rk~~~-~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~tld~i~~~~~  191 (497)
T KOG0157|consen  113 LKPWLGDGLLFSDGEKWHKHRKLLT-PAFHFEILKSFVPVFIESSLILLLLLELAASGEEVDLQDLLKRLTLDIICKTAM  191 (497)
T ss_pred             HHHHhcCccccCCchHHHHHHhhcc-HhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEcHHHHHHHHHHHHHHHHhc
Confidence            3334434444448899999999987 89999999999999888888766666553 233399999999999999999999


Q ss_pred             ccCC-CCCCchHHHHHHHHHHHHHHHHhcCCCcccccc-cccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCC-
Q 009821          206 GASL-RGEDWDAVAIQFREVLEEMFQVLGSGNISDLFP-LLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNE-  282 (524)
Q Consensus       206 G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~-  282 (524)
                      |..- +.+..  ...++..++..+........   ..| +..++...+..++..++.+.++++++++|++|+++....+ 
T Consensus       192 G~~~~~~~~~--~~~~~~~a~~~~~~~~~~~~---~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr~~~~~~~~  266 (497)
T KOG0157|consen  192 GPESLDAEGP--ELFEYVQAFDDLTELISKRI---NLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRERREELEKEGS  266 (497)
T ss_pred             CCccccccCC--cccHHHHHHHHHHHHHHHHH---cCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            9222 21221  22456666665444333211   122 2222222236788899999999999999999886432111 


Q ss_pred             --CCCcccHHHHHHHHhhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCc-
Q 009821          283 --GKSSKDFLQTLLELQQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSV-  359 (524)
Q Consensus       283 --~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~-  359 (524)
                        .....|+++.+....+   ..++++++++++. ++++||+||||++++|++++|+.||++|+|+++|++++++.+.. 
T Consensus       267 ~~~~~~~d~L~~~~~~~~---~~l~~~~i~d~v~-tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~~~~~  342 (497)
T KOG0157|consen  267 GEEKKRLDFLDTLLLEED---KPLTDEDIRDEVD-TFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGNRDDK  342 (497)
T ss_pred             cccchhhhHHHHHHHhcc---CCCCHHHHHHHHH-HheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCC
Confidence              1346788886333222   5789999999999 99999999999999999999999999999999999999974322 


Q ss_pred             ccccccCCChhHHHHHHhhhcCCCCCCCcCccccCCCccc-cceeeCCCCEEEeehhhhccCCCCCC-CCCCCCCCcccc
Q 009821          360 VEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNL-SGYTIPKGSTIFINAWAIQRNPEVWE-NPQDFQPDRFLE  437 (524)
Q Consensus       360 ~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~-~g~~ip~G~~v~~~~~~~h~d~~~~~-dp~~F~PeR~~~  437 (524)
                      ....+..+|+|+++||+||||||||+|+ +.|.+.+|+++ +||.||||+.|.+++|++|||+.+|+ ||++||||||+.
T Consensus       343 ~~~~~~~~m~yl~~vi~EsLRLyppvp~-~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~PeRf~~  421 (497)
T KOG0157|consen  343 WEVEKLDQMKYLEMVIKESLRLYPPVPL-VARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPERFLD  421 (497)
T ss_pred             CChhhhhhhHHHHHHHHHHhccCCCCch-hhcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCccccCC
Confidence            2222333699999999999999999999 78999999999 58999999999999999999999996 999999999996


Q ss_pred             ccCCCcccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCCCCCcccccccccccCCCceeeeecCCC
Q 009821          438 DVKIGDFRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTKFDLSDKLLMALKKSEPLVVIPTPRSL  517 (524)
Q Consensus       438 ~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~  517 (524)
                      ++...  ..++.+|+|||+|+|.|+|++||++|+|+++++|+++|++++..+..  ......++..+..+++|++++|+.
T Consensus       422 ~~~~~--~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~--~~~~~~~~l~~~~gl~v~~~~r~~  497 (497)
T KOG0157|consen  422 GEEKA--KRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDK--PKPVPELTLRPKNGLKVKLRPRGS  497 (497)
T ss_pred             CCCcC--CCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCC--ceeeeEEEEEecCCeEEEEEeCCC
Confidence            53321  33568999999999999999999999999999999999999887643  445567899999999999999973


No 14 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=1.5e-74  Score=569.28  Aligned_cols=451  Identities=26%  Similarity=0.452  Sum_probs=358.6

Q ss_pred             CCCCCCCceecccccCC-CChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCcccchhhhccC
Q 009821           55 PPGPRALPLVGNILSAE-PNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAAASVLTYG  133 (524)
Q Consensus        55 ppgp~~~p~iG~~~~~~-~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~~~~~~~  133 (524)
                      ||||+++|++||++++. .+++.++.+|+++||++|++++|+.++++|+||+.+++++.++...|+.++.......+..+
T Consensus         1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~   80 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRD   80 (466)
T ss_pred             CcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcC
Confidence            68999999999998875 45899999999999999999999999999999999999999888778777644333323332


Q ss_pred             Ccccc---cCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhcc----CCCceehhHHHHHHHHHHHHHHHhc
Q 009821          134 GKSIG---ASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGR----VGSPIKVGELMFLTSLDVATRMLWG  206 (524)
Q Consensus       134 ~~~~~---~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~----~~~~vd~~~~~~~~~~dvi~~~~fG  206 (524)
                      +..+.   +|+.|+++|+.+..++++...++.+.+.+.+.++.+++.+.+.    .+++||+.+.+..+++|+++.++||
T Consensus        81 ~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG  160 (466)
T PLN02655         81 KSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQALG  160 (466)
T ss_pred             CCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHHHhc
Confidence            32232   4899999999888788888888888888888888877776532    3578999999999999999999999


Q ss_pred             cCCCCCCchHH------HHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCC
Q 009821          207 ASLRGEDWDAV------AIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDM  280 (524)
Q Consensus       207 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~  280 (524)
                      .++.....+..      ...+...+..++...........+|.+++++...+.+...+....+.+++++.++++++....
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  240 (466)
T PLN02655        161 EDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQKKRIAR  240 (466)
T ss_pred             cccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            98765321100      122333344444433333334567766555432233344444444556777777766544221


Q ss_pred             CCCCCcccHHHHHHHHhhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcc
Q 009821          281 NEGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVV  360 (524)
Q Consensus       281 ~~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~  360 (524)
                        .....|+++.+++..    ..++++++.+++. ++++||+|||+++++|++++|++||++|+|+|+|++++++.+. +
T Consensus       241 --~~~~~d~l~~ll~~~----~~ls~~~i~~~~~-~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~-~  312 (466)
T PLN02655        241 --GEERDCYLDFLLSEA----THLTDEQLMMLVW-EPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCGDER-V  312 (466)
T ss_pred             --CCCcccHHHHHHhcc----CCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCC-C
Confidence              223468999999754    3589999999999 9999999999999999999999999999999999999998644 8


Q ss_pred             cccccCCChhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccC
Q 009821          361 EEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVK  440 (524)
Q Consensus       361 ~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~  440 (524)
                      +.+++.+|||++||++||||++|+++...+|.+.+|++++||.||||+.|.++.+++||||++|+||++|+||||++++.
T Consensus       313 ~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~~~~~~  392 (466)
T PLN02655        313 TEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERFLGEKY  392 (466)
T ss_pred             CHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCccccCCCCc
Confidence            99999999999999999999999999876899999999999999999999999999999999999999999999996532


Q ss_pred             CCcccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCCCCCcccccccccccCCCceeeeecCCC
Q 009821          441 IGDFRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTKFDLSDKLLMALKKSEPLVVIPTPRSL  517 (524)
Q Consensus       441 ~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~  517 (524)
                      .   ......|+|||+|+|.|||++||..|+++++++|+++|++++.++.. +..+..+++..++.++.|++++|+.
T Consensus       393 ~---~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~r~~  465 (466)
T PLN02655        393 E---SADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDE-EKEDTVQLTTQKLHPLHAHLKPRGS  465 (466)
T ss_pred             c---cCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCc-cccchhheeEeecCCcEEEEeecCC
Confidence            1   11236899999999999999999999999999999999999877632 2233456677788899999999874


No 15 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=5.5e-75  Score=580.88  Aligned_cols=447  Identities=21%  Similarity=0.366  Sum_probs=349.1

Q ss_pred             CCCCCCCCCCceecccccCC-------------------CChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHH
Q 009821           52 PPLPPGPRALPLVGNILSAE-------------------PNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLK  112 (524)
Q Consensus        52 ~~~ppgp~~~p~iG~~~~~~-------------------~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~  112 (524)
                      ...||||+++|++||++.++                   .+....+.+|+++||++|++|+|+.++|+++||+.+++++.
T Consensus        41 ~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il~  120 (516)
T PLN02290         41 RQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKELLT  120 (516)
T ss_pred             HcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHHHh
Confidence            34699999999999987653                   12234578899999999999999999999999999999998


Q ss_pred             hccccccCCCcccch--hhhccCCcccccCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhcc---CCCcee
Q 009821          113 EHDVVFANRDPSAAA--SVLTYGGKSIGASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGR---VGSPIK  187 (524)
Q Consensus       113 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~---~~~~vd  187 (524)
                      ++.. +..++.....  ....+.+....+|+.|+++|+.+. +.|+...++.+.+.+.++++++++.+.+.   ++.++|
T Consensus       121 ~~~~-~~~r~~~~~~~~~~~~g~~l~~~~g~~Wk~~Rk~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~vd  198 (516)
T PLN02290        121 KYNT-VTGKSWLQQQGTKHFIGRGLLMANGADWYHQRHIAA-PAFMGDRLKGYAGHMVECTKQMLQSLQKAVESGQTEVE  198 (516)
T ss_pred             cCCC-CCCCcchhhhHHHHHhcCCccccCchHHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEE
Confidence            7743 4444322111  111122333338999999999986 88999999999999999999999998753   235799


Q ss_pred             hhHHHHHHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHH
Q 009821          188 VGELMFLTSLDVATRMLWGASLRGEDWDAVAIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIF  267 (524)
Q Consensus       188 ~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~  267 (524)
                      +.+.+..+++|++++++||.++...+      ++...+...............+|++.+++ .+..+...+..+.+.+++
T Consensus       199 ~~~~~~~~~~~vi~~~~fG~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~p~~~~~p-~~~~~~~~~~~~~~~~~~  271 (516)
T PLN02290        199 IGEYMTRLTADIISRTEFDSSYEKGK------QIFHLLTVLQRLCAQATRHLCFPGSRFFP-SKYNREIKSLKGEVERLL  271 (516)
T ss_pred             hHHHHHHHHHHHHHHHHcCCccccch------HHHHHHHHHHHHHHHhhhhhcCchhhhCC-ChhHHHHHHHHHHHHHHH
Confidence            99999999999999999999875432      12222222221111111111234433332 223455566677888888


Q ss_pred             HHhhccccCCCCCC-CCCCcccHHHHHHHHhhc---CCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHH
Q 009821          268 ESLLRPGQSGQDMN-EGKSSKDFLQTLLELQQQ---GDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVM  343 (524)
Q Consensus       268 ~~~i~~~~~~~~~~-~~~~~~d~l~~ll~~~~~---~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~  343 (524)
                      .+.++++++..+.. ......|+++.+++...+   ++..++++++.+++. .+++||+|||+++++|++++|++||++|
T Consensus       272 ~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~-~~~~AG~dTta~tl~~~l~~L~~~P~vq  350 (516)
T PLN02290        272 MEIIQSRRDCVEIGRSSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECK-TFFFAGHETTALLLTWTLMLLASNPTWQ  350 (516)
T ss_pred             HHHHHHHHHHhhcccCCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHH-HHHhhhHHHHHHHHHHHHHHHhcCHHHH
Confidence            88887776532211 122357999999976432   223478899999998 9999999999999999999999999999


Q ss_pred             HHHHHHHHHhhcCCCcccccccCCChhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCC
Q 009821          344 RKARNELEQVVARDSVVEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEV  423 (524)
Q Consensus       344 ~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~  423 (524)
                      +|+|+|++++++.+ .++++++++||||+|||+||||++|++++ ++|.+.+|++++||.||||+.|.++.+++||||++
T Consensus       351 ~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~-~~R~~~~d~~i~g~~IP~Gt~V~~~~~~~~rdp~~  428 (516)
T PLN02290        351 DKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATL-LPRMAFEDIKLGDLHIPKGLSIWIPVLAIHHSEEL  428 (516)
T ss_pred             HHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCccc-cceeecCCeeECCEEECCCCEEEecHHHhcCChhh
Confidence            99999999999854 78999999999999999999999999997 79999999999999999999999999999999999


Q ss_pred             C-CCCCCCCCCccccccCCCcccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCCCCCccccccccc
Q 009821          424 W-ENPQDFQPDRFLEDVKIGDFRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTKFDLSDKLLMAL  502 (524)
Q Consensus       424 ~-~dp~~F~PeR~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~  502 (524)
                      | +||++||||||+..+.     .....|+|||.|+|.|||++||++|+++++++|+++|++++.++.+.  ......+.
T Consensus       429 ~~~dP~~F~PeRfl~~~~-----~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~~~--~~~~~~~~  501 (516)
T PLN02290        429 WGKDANEFNPDRFAGRPF-----APGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNYRH--APVVVLTI  501 (516)
T ss_pred             hCCChhhcCccccCCCCC-----CCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCccc--Cccceeee
Confidence            9 8999999999994321     12357999999999999999999999999999999999998876322  22235778


Q ss_pred             ccCCCceeeeecCCC
Q 009821          503 KKSEPLVVIPTPRSL  517 (524)
Q Consensus       503 ~~~~~~~v~~~~r~~  517 (524)
                      .+..+++|++++|++
T Consensus       502 ~p~~~~~~~~~~~~~  516 (516)
T PLN02290        502 KPKYGVQVCLKPLNP  516 (516)
T ss_pred             cCCCCCeEEEEeCCC
Confidence            888999999999974


No 16 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=3.2e-74  Score=571.04  Aligned_cols=441  Identities=19%  Similarity=0.283  Sum_probs=337.1

Q ss_pred             CCCCCCCCCCCCCCceecccccC-C----CChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCC
Q 009821           48 TRSTPPLPPGPRALPLVGNILSA-E----PNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRD  122 (524)
Q Consensus        48 ~~~~~~~ppgp~~~p~iG~~~~~-~----~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~  122 (524)
                      ..+..+.||||+++|++||++.+ .    ..++.++.+++++||++|++++|+.++|+++||+++++++.+++..|..+.
T Consensus        33 ~~~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~  112 (490)
T PLN02500         33 KQKRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSY  112 (490)
T ss_pred             ccCCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeC
Confidence            34455679999999999997643 1    356778999999999999999999999999999999999998776665443


Q ss_pred             cccchhhhccCCcccccCCchHHHHHHHHHhhcCcchhhh-cHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHHH
Q 009821          123 PSAAASVLTYGGKSIGASPEWPKLRQVLVRETMSNTSLNS-SSAIRRQAVLRSMKDVSGRVGSPIKVGELMFLTSLDVAT  201 (524)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~dvi~  201 (524)
                      .......++..+....+|+.|+++|+.+. +.|+...++. +.+.+.+.+..+++.+..  ++.+|+.+.+..+++|+++
T Consensus       113 ~~~~~~~~g~~~~~~~~g~~wr~~Rk~~~-~~f~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~vd~~~~~~~~~~~vi~  189 (490)
T PLN02500        113 PRSIGGILGKWSMLVLVGDMHRDMRSISL-NFLSHARLRTHLLKEVERHTLLVLDSWKE--NSTFSAQDEAKKFTFNLMA  189 (490)
T ss_pred             chHHHHHhCcccccccCCHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHHHhCC--CCCEEehHHHHHHHHHHHH
Confidence            22222222211222338999999999997 8899888876 467777777777777654  5679999999999999999


Q ss_pred             HHHhccCCCCCCchHHHHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCC
Q 009821          202 RMLWGASLRGEDWDAVAIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMN  281 (524)
Q Consensus       202 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~  281 (524)
                      +++||.+.+..+.    ..+...+.+.......  ....+|..       ..++..+..+.+.+++.+.+++++++....
T Consensus       190 ~~~fg~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~p~~-------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  256 (490)
T PLN02500        190 KHIMSMDPGEEET----EQLKKEYVTFMKGVVS--APLNFPGT-------AYRKALKSRATILKFIERKMEERIEKLKEE  256 (490)
T ss_pred             HHHhCCCCCchHH----HHHHHHHHHHHhhhhc--chhcCCCc-------ccHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence            9999987643221    2233323222221110  00112221       123445567778888888887765432211


Q ss_pred             C-CCCcccHHHHHHHHhhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhc-----
Q 009821          282 E-GKSSKDFLQTLLELQQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVA-----  355 (524)
Q Consensus       282 ~-~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~-----  355 (524)
                      + .....|+++.+++.     ..++++++++++. .+++||+|||+++++|++++|++|||+|+|+|+|++++++     
T Consensus       257 ~~~~~~~d~l~~ll~~-----~~ls~~~i~~~~~-~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~~  330 (490)
T PLN02500        257 DESVEEDDLLGWVLKH-----SNLSTEQILDLIL-SLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQS  330 (490)
T ss_pred             cCCCCcchHHHHHHhc-----cCCCHHHHHHHHH-HHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccccC
Confidence            1 12346899999873     2488999999998 9999999999999999999999999999999999999874     


Q ss_pred             CCCcccccccCCChhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCcc
Q 009821          356 RDSVVEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRF  435 (524)
Q Consensus       356 ~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~  435 (524)
                      .++.++.+|+.+|||++|||+||||++|+++. ++|.+.+|++++||.||||+.|.+++|++||||++|+||++||||||
T Consensus       331 ~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~-~~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F~PeRf  409 (490)
T PLN02500        331 GESELNWEDYKKMEFTQCVINETLRLGNVVRF-LHRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQLFNPWRW  409 (490)
T ss_pred             CCCCCCHHHhccCHHHHHHHHHHHhcCCCccC-eeeEeCCCceeCCEEECCCCEEEechhhcccCcccCCCccccChhhc
Confidence            23457899999999999999999999999998 58999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCcc----cCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCCCCCcccccccccccCCCceee
Q 009821          436 LEDVKIGDF----RGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTKFDLSDKLLMALKKSEPLVVI  511 (524)
Q Consensus       436 ~~~~~~~~~----~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  511 (524)
                      +++++....    ...+..|+|||+|+|.|||++||.+|+++++++|+++|++++.++.....   ...+ .++.++.|+
T Consensus       410 l~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~~~~---~~~~-~~~~~l~~~  485 (490)
T PLN02500        410 QQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQAFA---FPFV-DFPKGLPIR  485 (490)
T ss_pred             cCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCccee---cccc-cCCCCceEE
Confidence            965322110    01346899999999999999999999999999999999999876633211   1122 334688888


Q ss_pred             eecC
Q 009821          512 PTPR  515 (524)
Q Consensus       512 ~~~r  515 (524)
                      +++.
T Consensus       486 ~~~~  489 (490)
T PLN02500        486 VRRI  489 (490)
T ss_pred             EEeC
Confidence            8763


No 17 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=5.4e-73  Score=561.84  Aligned_cols=464  Identities=26%  Similarity=0.446  Sum_probs=346.7

Q ss_pred             CCCCCCCCCCCceecccccCC-CCh-hHHHHHHHHHh-CCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCcccch
Q 009821           51 TPPLPPGPRALPLVGNILSAE-PNL-HRYFTKLSQIY-GPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAAA  127 (524)
Q Consensus        51 ~~~~ppgp~~~p~iG~~~~~~-~~~-~~~~~~~~~ky-G~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~  127 (524)
                      ....||||.++|++||++.+. .++ ..++.++.++| |++|++++|+.++|+|+||+.+++++.++...|++|+.....
T Consensus        38 ~~~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~  117 (534)
T PLN03018         38 SRQLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIM  117 (534)
T ss_pred             CCCCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhh
Confidence            335799999999999998863 222 23555666666 799999999999999999999999999887778888754433


Q ss_pred             hhhccCC--cccc-cCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhcc--CCCceehhHHHHHHHHHHHHH
Q 009821          128 SVLTYGG--KSIG-ASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGR--VGSPIKVGELMFLTSLDVATR  202 (524)
Q Consensus       128 ~~~~~~~--~~~~-~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~--~~~~vd~~~~~~~~~~dvi~~  202 (524)
                      ..+..++  ..+. +|+.|+++|+.+...+++......+.+..+.++.++++.+.+.  .+.++|+.+.+..+++|++++
T Consensus       118 ~~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~  197 (534)
T PLN03018        118 ETIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYAVTMR  197 (534)
T ss_pred             hhhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHHHHHHHH
Confidence            3333222  2222 5999999999998444555555555666666778888887642  356799999999999999999


Q ss_pred             HHhccCCCCCCc-----hHHHHHHHHHHHHHHHH---hcCCCcccccc-cccccCccchHHHHHHHHHHHHHHHHHhhcc
Q 009821          203 MLWGASLRGEDW-----DAVAIQFREVLEEMFQV---LGSGNISDLFP-LLTRFDLQGLESKAKKLTVRLDKIFESLLRP  273 (524)
Q Consensus       203 ~~fG~~~~~~~~-----~~~~~~~~~~~~~~~~~---~~~~~~~~~~p-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~  273 (524)
                      ++||.++...+.     ......+...+......   .......+.+| +++++...+..++.....+.+.+++.+.+++
T Consensus       198 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  277 (534)
T PLN03018        198 MLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYNNPIIDE  277 (534)
T ss_pred             HHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHHH
Confidence            999998753211     10111122222222211   11111222333 3432221233344555566777888888877


Q ss_pred             ccCCCCCCCC-CCcccHHHHHHHHhhcCCC-CCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHH
Q 009821          274 GQSGQDMNEG-KSSKDFLQTLLELQQQGDY-SLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELE  351 (524)
Q Consensus       274 ~~~~~~~~~~-~~~~d~l~~ll~~~~~~~~-~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~  351 (524)
                      +++......+ ....|+++.+++..++++. .++++++++++. .+++||+|||+++++|++++|++||++|+|+++||+
T Consensus       278 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~-~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~  356 (534)
T PLN03018        278 RVELWREKGGKAAVEDWLDTFITLKDQNGKYLVTPDEIKAQCV-EFCIAAIDNPANNMEWTLGEMLKNPEILRKALKELD  356 (534)
T ss_pred             HHHHhhhccCCCCcccHHHHHHHhhcccCCCCCCHHHHHHHHH-HHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence            6543211111 2346999999987654332 489999999998 999999999999999999999999999999999999


Q ss_pred             HhhcCCCcccccccCCChhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCC
Q 009821          352 QVVARDSVVEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQ  431 (524)
Q Consensus       352 ~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~  431 (524)
                      ++++.++.++.+++.+|||++|||+|+||++|+++...+|.+.+|++++||.||||+.|.++.+++||||++|+||++|+
T Consensus       357 ~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~~p~~F~  436 (534)
T PLN03018        357 EVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLVYE  436 (534)
T ss_pred             HHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHhcCCcccCCCccccC
Confidence            99987777899999999999999999999999999866799999999999999999999999999999999999999999


Q ss_pred             CCccccccCCC-c--ccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCC-CCCcccccccccccCCC
Q 009821          432 PDRFLEDVKIG-D--FRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGT-KFDLSDKLLMALKKSEP  507 (524)
Q Consensus       432 PeR~~~~~~~~-~--~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~~~~~~~~~  507 (524)
                      ||||+++++.. .  ....+..|+|||+|+|.|||++||.+|+++++++|+++|++++.++. +++.....+.+.. +.+
T Consensus       437 PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~-p~~  515 (534)
T PLN03018        437 PERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDFGPLSLEEDDASLLM-AKP  515 (534)
T ss_pred             CccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCCCCCCccccccceec-CCC
Confidence            99999643210 0  01234689999999999999999999999999999999999987663 3333333344443 468


Q ss_pred             ceeeeecCC
Q 009821          508 LVVIPTPRS  516 (524)
Q Consensus       508 ~~v~~~~r~  516 (524)
                      ++|++++|.
T Consensus       516 ~~v~~~~R~  524 (534)
T PLN03018        516 LLLSVEPRL  524 (534)
T ss_pred             eEEEEEecc
Confidence            999999993


No 18 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=3e-73  Score=559.44  Aligned_cols=430  Identities=19%  Similarity=0.287  Sum_probs=338.7

Q ss_pred             CCCCCCCCCCCceecccccCCCChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCcccchhhh
Q 009821           51 TPPLPPGPRALPLVGNILSAEPNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAAASVL  130 (524)
Q Consensus        51 ~~~~ppgp~~~p~iG~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~~~~  130 (524)
                      ..+.||||+++|++||++.+..+...++.+++++||++|++++|+.++++++||+.+++++.++...+..+........+
T Consensus        29 r~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~l  108 (463)
T PLN02774         29 KKGLPPGTMGWPLFGETTEFLKQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQSMLDIL  108 (463)
T ss_pred             CCCCCCCCCCCCchhhHHHHHHhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHHHHHHh
Confidence            33578899999999999887666788999999999999999999999999999999999998776655443322222223


Q ss_pred             ccCCcccccCCchHHHHHHHHHhhcCcchhhh-cHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHHHHHHhccCC
Q 009821          131 TYGGKSIGASPEWPKLRQVLVRETMSNTSLNS-SSAIRRQAVLRSMKDVSGRVGSPIKVGELMFLTSLDVATRMLWGASL  209 (524)
Q Consensus       131 ~~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~  209 (524)
                      +.++....+|+.|+.+|+.+. +.|+...++. +.+.+.+.++++++.+..  ++++|+.+.+..++++++++++||...
T Consensus       109 g~~~~~~~~g~~w~~~R~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~g~~~  185 (463)
T PLN02774        109 GTCNIAAVHGSTHRYMRGSLL-SLISPTMIRDHLLPKIDEFMRSHLSGWDG--LKTIDIQEKTKEMALLSALKQIAGTLS  185 (463)
T ss_pred             CccchhhcCCHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHhhCC--CCCEEeeHHHHHHHHHHHHHHHcCCCC
Confidence            222222238999999999996 7899888875 688888888888887753  467999999999999999999999764


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcccH
Q 009821          210 RGEDWDAVAIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSSKDF  289 (524)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~  289 (524)
                      ...     ..++.+.+....   ... .  .+|.  +++. ...++..++++.+.+++.+.+++++++.     ....|+
T Consensus       186 ~~~-----~~~~~~~~~~~~---~~~-~--~~~~--~lp~-~~~~~~~~~~~~~~~~~~~~i~~r~~~~-----~~~~d~  246 (463)
T PLN02774        186 KPI-----SEEFKTEFFKLV---LGT-L--SLPI--DLPG-TNYRSGVQARKNIVRMLRQLIQERRASG-----ETHTDM  246 (463)
T ss_pred             hHH-----HHHHHHHHHHHh---ccc-c--cCCc--CCCC-hhhhHHHHHHHHHHHHHHHHHHHHHhcC-----CCcccH
Confidence            321     122222222221   110 0  1111  1111 1134556778888899999988876432     234799


Q ss_pred             HHHHHHHhhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcC---CCcccccccC
Q 009821          290 LQTLLELQQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVAR---DSVVEEFHLA  366 (524)
Q Consensus       290 l~~ll~~~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~---~~~~~~~~l~  366 (524)
                      ++.+++... .+..++++++.+++. ++++||+|||+++++|++++|++||++|+|+|+|++++++.   ++.++++++.
T Consensus       247 l~~ll~~~~-~~~~~s~~ei~~~~~-~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~~~~~l~  324 (463)
T PLN02774        247 LGYLMRKEG-NRYKLTDEEIIDQII-TILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDPIDWNDYK  324 (463)
T ss_pred             HHHHHhCcc-CCCCCCHHHHHHHHH-HHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCCCCCCCHHHHh
Confidence            999997432 223589999999998 99999999999999999999999999999999999999863   3567899999


Q ss_pred             CChhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCcccC
Q 009821          367 KLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGDFRG  446 (524)
Q Consensus       367 ~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~~~  446 (524)
                      +|||++|||+|+||++|+++. +.|.+.+|++++||.||||+.|+++++.+||||++|+||++|+||||++.+.    ..
T Consensus       325 ~lpyl~a~ikE~lRl~P~v~~-~~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~----~~  399 (463)
T PLN02774        325 SMRFTRAVIFETSRLATIVNG-VLRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLDKSL----ES  399 (463)
T ss_pred             cCcHHHHHHHHHHhcCCCCCC-cccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCchhcCCCCc----CC
Confidence            999999999999999999987 6799999999999999999999999999999999999999999999996431    11


Q ss_pred             CccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCCCCCcccccccccccCCCceeeeec
Q 009821          447 NNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTKFDLSDKLLMALKKSEPLVVIPTP  514 (524)
Q Consensus       447 ~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  514 (524)
                       ...|+|||+|+|.|||++||.+|++++++.|+++|++++.++.+...    ..+..++++++|++++
T Consensus       400 -~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~~~~----~~~~~p~~g~~~~~~~  462 (463)
T PLN02774        400 -HNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDKLMK----FPRVEAPNGLHIRVSP  462 (463)
T ss_pred             -CccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCcccc----CCCCCCCCCceEEeee
Confidence             23699999999999999999999999999999999999987643221    1233366888888875


No 19 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2e-73  Score=523.89  Aligned_cols=451  Identities=26%  Similarity=0.363  Sum_probs=374.1

Q ss_pred             CCCCCCCCCCCceecccccC----CCChhHHHHHHHHHhCCeEEEe-cCCeeEEEeCCHHHHHHHHHhccccccCCC-cc
Q 009821           51 TPPLPPGPRALPLVGNILSA----EPNLHRYFTKLSQIYGPIFKFY-LGRKLCIVIGSPSLAKQVLKEHDVVFANRD-PS  124 (524)
Q Consensus        51 ~~~~ppgp~~~p~iG~~~~~----~~~~~~~~~~~~~kyG~i~~~~-~g~~~~vvv~dp~~i~~il~~~~~~~~~~~-~~  124 (524)
                      +...+|||+.+|++|.++.+    ..+.|+.+..++++||+||+.. +|+...|.+.||++++.++++++. ++-|+ ..
T Consensus        48 ~~~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG~-~P~Rp~~~  126 (519)
T KOG0159|consen   48 PFEEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEGK-YPFRPLLI  126 (519)
T ss_pred             ChhhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCCC-CCCccccc
Confidence            44568999999999998733    3567899999999999999999 899999999999999999998874 45553 11


Q ss_pred             c---chhhhccC--CcccccCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhcc-----CCCceehhHHHHH
Q 009821          125 A---AASVLTYG--GKSIGASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGR-----VGSPIKVGELMFL  194 (524)
Q Consensus       125 ~---~~~~~~~~--~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~-----~~~~vd~~~~~~~  194 (524)
                      .   .......+  |....+|++|.+.|..+++..+++.+++.+.+.+++.+++++..+...     ...+.|+.+.+.+
T Consensus       127 ~~w~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~~  206 (519)
T KOG0159|consen  127 EPWVAYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQELYR  206 (519)
T ss_pred             chhhhhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHHHH
Confidence            1   11122222  233339999999999999889999999999999999999999888765     2347899999999


Q ss_pred             HHHHHHHHHHhccCCCCCCc--hHHHHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhc
Q 009821          195 TSLDVATRMLWGASLRGEDW--DAVAIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLR  272 (524)
Q Consensus       195 ~~~dvi~~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~  272 (524)
                      ++++.|+.++||.+++....  +.....|.++++.++.....   ....|.++++..++.++++.++.+.+.++..++|+
T Consensus       207 wslEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~---l~~~p~l~r~~~t~~wk~~~~~~D~i~~~~~~~Id  283 (519)
T KOG0159|consen  207 WSLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQ---LMLMPSLWRYFPTKVWKDFVRAWDQIFDVGDKYID  283 (519)
T ss_pred             HHHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHH---HHhcchHHHhCCChHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999987643  34667888888888865443   22344555554566788888899999999999998


Q ss_pred             cccCCCCCCCC--CCcccHHHHHHHHhhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHH
Q 009821          273 PGQSGQDMNEG--KSSKDFLQTLLELQQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNEL  350 (524)
Q Consensus       273 ~~~~~~~~~~~--~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei  350 (524)
                      ++.++.+.++.  .+..+.+..++..     ..++.+++..+++ .++.||.||||++++|+||+|++||++|+||++|+
T Consensus       284 ~~l~~l~~~~~~~~~~~~~l~~~L~~-----~~l~~k~~~~~~~-dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~Ei  357 (519)
T KOG0159|consen  284 NALEELEKQDSAGSEYTGSLLELLLR-----KELSRKDAKANVM-DLLAAGVDTTSNTLLWALYELARNPEVQQRLREEI  357 (519)
T ss_pred             HHHHHHHhccccccchhHHHHHHHHH-----ccCCHHHHHHHHH-HHHHHhccchHHHHHHHHHHHhcChHHHHHHHHHH
Confidence            87665432222  1233344333332     3578899999998 99999999999999999999999999999999999


Q ss_pred             HHhhcC-CCcccccccCCChhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCC
Q 009821          351 EQVVAR-DSVVEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQD  429 (524)
Q Consensus       351 ~~~~~~-~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~  429 (524)
                      .+++++ +..++.+++.+||||.||||||+||||.+++ ..|...+|..++||.|||||.|.++.+.+.+||++|++|++
T Consensus       358 ~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~-~~R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~p~~  436 (519)
T KOG0159|consen  358 LAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPG-NGRVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPDPEE  436 (519)
T ss_pred             HhhCCCcccccchHHHhhCHHHHHHHHhhhceeccccc-cccccchhceeccceecCCCeEEEeehhhccChhhCCCccc
Confidence            999987 6788999999999999999999999999998 68999999999999999999999999999999999999999


Q ss_pred             CCCCccccccCCCcccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCCCCCcccccccccccCCCce
Q 009821          430 FQPDRFLEDVKIGDFRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTKFDLSDKLLMALKKSEPLV  509 (524)
Q Consensus       430 F~PeR~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  509 (524)
                      |+||||++.+.   ...++..++|||.|+|+|+||++|.+|+-++||+++++|+++..++.+++  .....+..|..++.
T Consensus       437 F~PeRWL~~~~---~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~pv~--~~~~~il~P~~~l~  511 (519)
T KOG0159|consen  437 FLPERWLKPST---KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEEPVE--YVYRFILVPNRPLR  511 (519)
T ss_pred             cChhhhccccc---CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCCCcc--ceeEEEEcCCCCcc
Confidence            99999998752   14578999999999999999999999999999999999999987754444  45567777889999


Q ss_pred             eeeecCCC
Q 009821          510 VIPTPRSL  517 (524)
Q Consensus       510 v~~~~r~~  517 (524)
                      +++++|++
T Consensus       512 f~f~~r~~  519 (519)
T KOG0159|consen  512 FKFRPRNE  519 (519)
T ss_pred             eeeeeCCC
Confidence            99999874


No 20 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=1.2e-72  Score=557.66  Aligned_cols=447  Identities=19%  Similarity=0.275  Sum_probs=333.3

Q ss_pred             CCCCCCCCceecccccCCCC---hhHHHHHHHHHhCCeEE---EecCCeeEEEeCCHHHHHHHHHhccccccCCCcccch
Q 009821           54 LPPGPRALPLVGNILSAEPN---LHRYFTKLSQIYGPIFK---FYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAAA  127 (524)
Q Consensus        54 ~ppgp~~~p~iG~~~~~~~~---~~~~~~~~~~kyG~i~~---~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~  127 (524)
                      ..|||.++|++||+..+..+   ..+.+.+...+||..++   .|+|+.++++|+||+.+++|+.++...|.++......
T Consensus        32 ~~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~~~  111 (500)
T PLN02169         32 GQPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFKKI  111 (500)
T ss_pred             CCCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHHHH
Confidence            47788899999998765222   33444444455886655   6889999999999999999998876666665432222


Q ss_pred             hhhccCCcccccCCchHHHHHHHHHhhcCcchhhhc--HHHHHHHHHHHHHHHhcc--CCCceehhHHHHHHHHHHHHHH
Q 009821          128 SVLTYGGKSIGASPEWPKLRQVLVRETMSNTSLNSS--SAIRRQAVLRSMKDVSGR--VGSPIKVGELMFLTSLDVATRM  203 (524)
Q Consensus       128 ~~~~~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~--~~~~~~~~~~l~~~l~~~--~~~~vd~~~~~~~~~~dvi~~~  203 (524)
                      ....+.+....+|+.|+++||.+. +.|+...+..+  .+.+.+.++.+++.+.+.  .++++|+.+.+..+++|+|+++
T Consensus       112 ~~~~g~gl~~~~g~~Wr~~Rk~l~-p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~dvi~~~  190 (500)
T PLN02169        112 FDVLGEGILTVDFELWEDLRKSNH-ALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFMFDTSSIL  190 (500)
T ss_pred             HHhhcCcccccCcHHHHHHHHHHH-HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHHHHHHHhh
Confidence            222223334448999999999997 89988876542  355666677777776542  4678999999999999999999


Q ss_pred             HhccCCCCCCchHHHHHHHHHHHHHHHHhcCCCccccccccc----ccCccchHHHHHHHHHHHHHHHHHhhccccCCCC
Q 009821          204 LWGASLRGEDWDAVAIQFREVLEEMFQVLGSGNISDLFPLLT----RFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQD  279 (524)
Q Consensus       204 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~----~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~  279 (524)
                      +||.+.+....+....++..++..........   ...|++.    .+...+..++..+..+.+.+++.+.|++++++..
T Consensus       191 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~  267 (500)
T PLN02169        191 MTGYDPMSLSIEMLEVEFGEAADIGEEAIYYR---HFKPVILWRLQNWIGIGLERKMRTALATVNRMFAKIISSRRKEEI  267 (500)
T ss_pred             eeCCCccccCCCCCCCHHHHHHHHHHHHHHhH---HhccHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            99998754321101123444433332221110   1122211    1111234566778888899999998888765311


Q ss_pred             -CCC-CCCcccHHHHHHHHhhcC---CCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhh
Q 009821          280 -MNE-GKSSKDFLQTLLELQQQG---DYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVV  354 (524)
Q Consensus       280 -~~~-~~~~~d~l~~ll~~~~~~---~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~  354 (524)
                       ..+ .....|+++.+++.....   +..++++++.+++. ++++||+|||+++++|++++|++||++|+|+++||++++
T Consensus       268 ~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~-~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~Ei~~v~  346 (500)
T PLN02169        268 SRAETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIF-SLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEINTKF  346 (500)
T ss_pred             ccccccCCCcCHHHHHHhccccccccccCCChHHHHHHHH-HHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHHHHhhC
Confidence             011 122468999999764321   12468889999999 999999999999999999999999999999999999874


Q ss_pred             cCCCcccccccCCChhHHHHHHhhhcCCCCCCCcCccccCCCc-cccceeeCCCCEEEeehhhhccCCCCC-CCCCCCCC
Q 009821          355 ARDSVVEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATS-NLSGYTIPKGSTIFINAWAIQRNPEVW-ENPQDFQP  432 (524)
Q Consensus       355 ~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~-~~~g~~ip~G~~v~~~~~~~h~d~~~~-~dp~~F~P  432 (524)
                            +.+++.+||||+||++||||+||++|.. .|.+.+|. .++||.||||+.|.+++|++||||++| +||++|||
T Consensus       347 ------~~~dl~~L~Yl~avi~EtLRl~P~vp~~-~r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~dP~~F~P  419 (500)
T PLN02169        347 ------DNEDLEKLVYLHAALSESMRLYPPLPFN-HKAPAKPDVLPSGHKVDAESKIVICIYALGRMRSVWGEDALDFKP  419 (500)
T ss_pred             ------CHHHHhcCHHHHHHHHHHHhcCCCCCcC-ceecCCCCCccCCEEECCCCEEEEcHHHhhCCccccCCChhhcCc
Confidence                  5789999999999999999999999995 56665554 459999999999999999999999999 89999999


Q ss_pred             CccccccCCCcccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCCCCCcccccccccccCCCceeee
Q 009821          433 DRFLEDVKIGDFRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTKFDLSDKLLMALKKSEPLVVIP  512 (524)
Q Consensus       433 eR~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  512 (524)
                      |||+++++.. ....+..|+|||+|+|+|+|++||++|+++++++|+++|++++.++.++.  .....++.++++++|++
T Consensus       420 eRfl~~~~~~-~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~~~~--~~~~~~l~~~~gl~l~l  496 (500)
T PLN02169        420 ERWISDNGGL-RHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGHKIE--AIPSILLRMKHGLKVTV  496 (500)
T ss_pred             cccCCCCCCc-cCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCCCcc--cccceEEecCCCEEEEE
Confidence            9999653221 11235789999999999999999999999999999999999987664432  33457778889999999


Q ss_pred             ecC
Q 009821          513 TPR  515 (524)
Q Consensus       513 ~~r  515 (524)
                      ++|
T Consensus       497 ~~~  499 (500)
T PLN02169        497 TKK  499 (500)
T ss_pred             EeC
Confidence            887


No 21 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=1.8e-73  Score=568.67  Aligned_cols=450  Identities=31%  Similarity=0.564  Sum_probs=361.9

Q ss_pred             CCCCCCCceecccccCC--CChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCcccchhh--h
Q 009821           55 PPGPRALPLVGNILSAE--PNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAAASV--L  130 (524)
Q Consensus        55 ppgp~~~p~iG~~~~~~--~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~~~--~  130 (524)
                      ||||+++|++||++++.  .++++++.+++++||+||++++++.++++|+||+.+++|+.++...+..+........  .
T Consensus         1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~   80 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG   80 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence            79999999999999875  6788999999999999999999999999999999999999988766655433222211  1


Q ss_pred             ccCCcccc--cCCchHHHHHHHHHhhcCcc-hhhhcHHHHHHHHHHHHHHHhccCC--CceehhHHHHHHHHHHHHHHHh
Q 009821          131 TYGGKSIG--ASPEWPKLRQVLVRETMSNT-SLNSSSAIRRQAVLRSMKDVSGRVG--SPIKVGELMFLTSLDVATRMLW  205 (524)
Q Consensus       131 ~~~~~~~~--~~~~w~~~R~~~~~~~~~~~-~l~~~~~~~~~~~~~l~~~l~~~~~--~~vd~~~~~~~~~~dvi~~~~f  205 (524)
                      ...+.++.  +++.|+.+|+.+. +.|+.. .+ .+.+.+.+.++.+++.+....+  ..+|+.+++..+++|++++++|
T Consensus        81 ~~~~~~l~~~~~~~~~~~R~~~~-~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~~~f  158 (463)
T PF00067_consen   81 PFGGKGLFFSDGERWRRQRRLLA-PAFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGRVLF  158 (463)
T ss_dssp             HHTTTSSTTSSHHHHHHHHHHHH-HHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccc-ccccccccc-ccccccccccccccccccccccccceeeeecccccccccccccccc
Confidence            22233333  7789999999997 666666 66 8999999999999999987633  3699999999999999999999


Q ss_pred             ccCCCCCCchHHHHHHHHHHHHHHHHhcCC--CcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCC
Q 009821          206 GASLRGEDWDAVAIQFREVLEEMFQVLGSG--NISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEG  283 (524)
Q Consensus       206 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~  283 (524)
                      |.+++..+.+ ....+.+.+..+...+...  .....+|++.+++ ....+...+..+.+.+++.+.+++++++.+.. .
T Consensus       159 G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~  235 (463)
T PF00067_consen  159 GKDFGSLDDE-DFEEFLEAFDELFELLSNFFWNLPFFFPWLKYLP-TPLFRRFKRARDRLRKYIKEIIEERREELDDG-D  235 (463)
T ss_dssp             SSHHHGTTHH-HHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHSHHSS-S
T ss_pred             cceeeecccc-cccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccc-c
Confidence            9988744432 2345556666655443221  2334556444443 34566777788888999999998887764411 3


Q ss_pred             CCcccHHHHHHHHh-hcCC-CCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCccc
Q 009821          284 KSSKDFLQTLLELQ-QQGD-YSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVE  361 (524)
Q Consensus       284 ~~~~d~l~~ll~~~-~~~~-~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~  361 (524)
                      ....|+++.+++.. +.++ ..++++++.++++ .+++||+|||+.+++|++++|++||++|+|+|+|++++.+.++.++
T Consensus       236 ~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~-~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~  314 (463)
T PF00067_consen  236 ESRRDLLDSLLQASSDSDGPSGLSDEEIAAELL-TLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGDGREIT  314 (463)
T ss_dssp             SSCSSHHHHHHHHHHTTTTTSSSSHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTTSSSHH
T ss_pred             ccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccc
Confidence            46789999999987 3333 3799999999999 9999999999999999999999999999999999999997667889


Q ss_pred             ccccCCChhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCC
Q 009821          362 EFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKI  441 (524)
Q Consensus       362 ~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~  441 (524)
                      .+++.+||||+|||+||||++|+++..++|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+||||++.+. 
T Consensus       315 ~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~-  393 (463)
T PF00067_consen  315 FEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFLDERG-  393 (463)
T ss_dssp             HHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGBTTTS-
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-
Confidence            9999999999999999999999999657899999999999999999999999999999999999999999999997643 


Q ss_pred             CcccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCCCCCcccccccccccCCCceeee
Q 009821          442 GDFRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTKFDLSDKLLMALKKSEPLVVIP  512 (524)
Q Consensus       442 ~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  512 (524)
                       .....+..|+|||.|+|.|||++||.+|+++++|+||++||+++.++..............++.+++|++
T Consensus       394 -~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  463 (463)
T PF00067_consen  394 -ISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEPQEQQNGFLLPPKPLKVKF  463 (463)
T ss_dssp             -TBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGEEECSCSSSEEESSSEEEE
T ss_pred             -ccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCCccccCceEeeCCCcEEeC
Confidence             1123567899999999999999999999999999999999999977654444333323444456677764


No 22 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=3.3e-72  Score=560.35  Aligned_cols=453  Identities=21%  Similarity=0.307  Sum_probs=334.1

Q ss_pred             CCCCCCCceecccccCCCChhHHHHHHHHHh---CCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCccc-chhhh
Q 009821           55 PPGPRALPLVGNILSAEPNLHRYFTKLSQIY---GPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSA-AASVL  130 (524)
Q Consensus        55 ppgp~~~p~iG~~~~~~~~~~~~~~~~~~ky---G~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~-~~~~~  130 (524)
                      +|||+++|++||++.+..+ +..+.+|.++|   |++|++++|+.++++++||+.+++|+.++...+.++.... .....
T Consensus        32 ~pgp~~~p~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~~~  110 (516)
T PLN03195         32 RKGPKSWPIIGAALEQLKN-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYMEVL  110 (516)
T ss_pred             cCCCCCCCeecchHHHHhc-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHHHHH
Confidence            6899999999998765333 34566777777   8999999999999999999999999987644455543221 11111


Q ss_pred             ccCCcccccCCchHHHHHHHHHhhcCcchhhhcHHHH-HHHHHHHHHHHhcc--CCCceehhHHHHHHHHHHHHHHHhcc
Q 009821          131 TYGGKSIGASPEWPKLRQVLVRETMSNTSLNSSSAIR-RQAVLRSMKDVSGR--VGSPIKVGELMFLTSLDVATRMLWGA  207 (524)
Q Consensus       131 ~~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~-~~~~~~l~~~l~~~--~~~~vd~~~~~~~~~~dvi~~~~fG~  207 (524)
                      ...+....+|+.|+++||.+. +.|+...++.+.+.+ .+.++.+.+.+.+.  .++++|+.+++..+++|++++++||.
T Consensus       111 ~g~~l~~~~g~~w~~~Rr~l~-~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~  189 (516)
T PLN03195        111 LGDGIFNVDGELWRKQRKTAS-FEFASKNLRDFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSICKVGFGV  189 (516)
T ss_pred             hcCeeeccCcHHHHHHHHhcc-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHHHHHhCC
Confidence            222222238999999999996 889999999988876 55566666655432  46789999999999999999999999


Q ss_pred             CCCCCCchHHHHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCC---CCC
Q 009821          208 SLRGEDWDAVAIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMN---EGK  284 (524)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~---~~~  284 (524)
                      +++..+.+.....+.+.++........... ..++.+..+......+...+..+.+.+++.+.+++++++....   ...
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  268 (516)
T PLN03195        190 EIGTLSPSLPENPFAQAFDTANIIVTLRFI-DPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEMDEARKSGKK  268 (516)
T ss_pred             CccccccCCCccHHHHHHHHHHHHHHHHHh-cchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence            886543210112333333332211110000 0111111111111223445566777777877777665432110   112


Q ss_pred             CcccHHHHHHHHhhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcC--------
Q 009821          285 SSKDFLQTLLELQQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVAR--------  356 (524)
Q Consensus       285 ~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~--------  356 (524)
                      ...|+++.+++...+++..++++++.++++ .+++||+|||+++++|++++|++||++|+|||+|++++++.        
T Consensus       269 ~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~-~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~  347 (516)
T PLN03195        269 VKHDILSRFIELGEDPDSNFTDKSLRDIVL-NFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERAKEEDPE  347 (516)
T ss_pred             ccccHHHHHHhccCCCCCCCCHHHHHHHHH-HHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhccccccccc
Confidence            356899999986544344689999999999 99999999999999999999999999999999999988642        


Q ss_pred             ------------CCcccccccCCChhHHHHHHhhhcCCCCCCCcCccccCCCcc-ccceeeCCCCEEEeehhhhccCCCC
Q 009821          357 ------------DSVVEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSN-LSGYTIPKGSTIFINAWAIQRNPEV  423 (524)
Q Consensus       357 ------------~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~-~~g~~ip~G~~v~~~~~~~h~d~~~  423 (524)
                                  ++.++++++.+||||+|||+||||++|++|+. .|.+.+|.. ++|+.||||+.|.++++++||||++
T Consensus       348 ~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~-~r~~~~d~~~~~G~~IpkGt~V~~~~~~~h~dp~~  426 (516)
T PLN03195        348 DSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQD-PKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYN  426 (516)
T ss_pred             ccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcch-hhhhccCcCcCCCcEECCCCEEEEehHhhccChhh
Confidence                        24578899999999999999999999999995 666666655 4999999999999999999999999


Q ss_pred             C-CCCCCCCCCccccccCCCcccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCCCCCccccccccc
Q 009821          424 W-ENPQDFQPDRFLEDVKIGDFRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTKFDLSDKLLMAL  502 (524)
Q Consensus       424 ~-~dp~~F~PeR~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~  502 (524)
                      | +||++|+||||++++.. . ...+..|+|||+|+|.|+|++||++|++++++.|+++|++++.++.+...  ....+.
T Consensus       427 ~g~dP~~F~PeRwl~~~~~-~-~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~--~~~~~~  502 (516)
T PLN03195        427 WGPDAASFKPERWIKDGVF-Q-NASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGHPVKY--RMMTIL  502 (516)
T ss_pred             hccChhhcCCcccCCCCCc-C-CCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCCccee--eeeeEE
Confidence            9 99999999999953211 0 12346799999999999999999999999999999999999876643332  333456


Q ss_pred             ccCCCceeeeecCC
Q 009821          503 KKSEPLVVIPTPRS  516 (524)
Q Consensus       503 ~~~~~~~v~~~~r~  516 (524)
                      .++.+++|++++|.
T Consensus       503 ~~~~~~~v~~~~r~  516 (516)
T PLN03195        503 SMANGLKVTVSRRS  516 (516)
T ss_pred             ecCCCEEEEEEeCC
Confidence            67788999999874


No 23 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=3.2e-71  Score=554.62  Aligned_cols=437  Identities=22%  Similarity=0.354  Sum_probs=329.9

Q ss_pred             CCChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCcccchhhhccCCcccccCCchHHHHHHH
Q 009821           71 EPNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAAASVLTYGGKSIGASPEWPKLRQVL  150 (524)
Q Consensus        71 ~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~  150 (524)
                      ++.++..+.+++++|||||++++|+.++++|+||+.+++|+.++...+.++............+....+|+.|+.+|+.+
T Consensus       150 ~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~~g~~l~~~dge~wr~rRr~l  229 (633)
T PLN02738        150 GEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFVMGKGLIPADGEIWRVRRRAI  229 (633)
T ss_pred             CchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhccCCceecCCcHHHHHHHHhc
Confidence            55678889999999999999999999999999999999999877665666533221111122222233899999999999


Q ss_pred             HHhhcCcchhhhcHHHHHHHHHHHHHHHhcc--CCCceehhHHHHHHHHHHHHHHHhccCCCCCCch-HHHHHHHHHHHH
Q 009821          151 VRETMSNTSLNSSSAIRRQAVLRSMKDVSGR--VGSPIKVGELMFLTSLDVATRMLWGASLRGEDWD-AVAIQFREVLEE  227 (524)
Q Consensus       151 ~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~--~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~-~~~~~~~~~~~~  227 (524)
                      . +.|+...+..+.+.+.+.++++++.+.+.  .++++|+.+.+..+++|+|++++||.+++....+ .....+...+..
T Consensus       230 ~-p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~~~~~~~~~~~~~~  308 (633)
T PLN02738        230 V-PALHQKYVAAMISLFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSNDTGIVEAVYTVLRE  308 (633)
T ss_pred             c-HhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCccccccchHHHHHHHHHHHH
Confidence            7 89999999999999999999999998763  5678999999999999999999999998754322 122223333322


Q ss_pred             HHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccC-------CCCCC-CCCCcccHHHHHHHHhhc
Q 009821          228 MFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQS-------GQDMN-EGKSSKDFLQTLLELQQQ  299 (524)
Q Consensus       228 ~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~-------~~~~~-~~~~~~d~l~~ll~~~~~  299 (524)
                      .............+|.+..+.  ...++..+..+.+.++..+.++.+++       ..... ......|+++.|++..  
T Consensus       309 ~~~~~~~~~~~~~~p~~~~l~--~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~dil~~Ll~~~--  384 (633)
T PLN02738        309 AEDRSVSPIPVWEIPIWKDIS--PRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDPSILHFLLASG--  384 (633)
T ss_pred             HHHHhhcchhhhhhhHHhhhc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcccccccchHHHHHHHcC--
Confidence            221111111111122222111  11233333444444444444332211       10000 0123468999998753  


Q ss_pred             CCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcccccccCCChhHHHHHHhhh
Q 009821          300 GDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLPYLEAIVKETL  379 (524)
Q Consensus       300 ~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~l  379 (524)
                        ..++++++.++++ .+++||+|||+++++|++++|++||++|+|||+|++++++ ++.++++++.+||||+|||+|+|
T Consensus       385 --~~ls~~~L~~e~~-~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~-~~~~t~edL~kLPYL~AVIkEtL  460 (633)
T PLN02738        385 --DDVSSKQLRDDLM-TMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLG-DRFPTIEDMKKLKYTTRVINESL  460 (633)
T ss_pred             --CCCCHHHHHHHHH-HHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcC-CCCCCHHHHccCHHHHHHHHHHH
Confidence              3588999999998 9999999999999999999999999999999999999998 46789999999999999999999


Q ss_pred             cCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCcccCCccceeecCCCCC
Q 009821          380 RLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGDFRGNNFNYLPFGSGRR  459 (524)
Q Consensus       380 Rl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~~~~~~~~~pFg~G~r  459 (524)
                      |++|++++ +.|.+.+|.+++||.|||||.|.++.|.+||||++||||++|+||||+.+....+.......|+|||.|+|
T Consensus       461 RL~p~~p~-~~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~~~~~~vpFG~G~R  539 (633)
T PLN02738        461 RLYPQPPV-LIRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQNFSYLPFGGGPR  539 (633)
T ss_pred             hcCCCccc-cceeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCccccCCCCceeCCCCCCC
Confidence            99999998 57989999999999999999999999999999999999999999999853211111223468999999999


Q ss_pred             CCCCHHHHHHHHHHHHHHHhhhceeeCCCCCCCCcccccccccccCCCceeeeecCCCc
Q 009821          460 ICPGIPLAEKIVPHVLANLLHLFEWSLPEGTKFDLSDKLLMALKKSEPLVVIPTPRSLS  518 (524)
Q Consensus       460 ~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~~  518 (524)
                      .|+|++||++|+++++|.|+++|++++.++.+ +.......+..++.+++|++++|+..
T Consensus       540 ~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~-~~~~~~~~~~~p~~~l~v~l~~R~~~  597 (633)
T PLN02738        540 KCVGDMFASFENVVATAMLVRRFDFQLAPGAP-PVKMTTGATIHTTEGLKMTVTRRTKP  597 (633)
T ss_pred             CCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCC-CcccccceEEeeCCCcEEEEEECCCC
Confidence            99999999999999999999999999887632 22222345666778899999999653


No 24 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=4.4e-71  Score=542.98  Aligned_cols=436  Identities=20%  Similarity=0.287  Sum_probs=340.1

Q ss_pred             CCCCCCCCCCCCCceecccccC-----CCChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCc
Q 009821           49 RSTPPLPPGPRALPLVGNILSA-----EPNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDP  123 (524)
Q Consensus        49 ~~~~~~ppgp~~~p~iG~~~~~-----~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~  123 (524)
                      +++.++||||.++|++||++.+     ..+++.++.+++++||+||++++|+.++|+++||+++++++.+++..+..+..
T Consensus         3 ~~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~   82 (452)
T PLN03141          3 KKKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYP   82 (452)
T ss_pred             CCCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCc
Confidence            3456678999999999998876     34688999999999999999999999999999999999999988777765533


Q ss_pred             ccchhhhccCCcccccCCchHHHHHHHHHhhcCcchhhh-cHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHHHH
Q 009821          124 SAAASVLTYGGKSIGASPEWPKLRQVLVRETMSNTSLNS-SSAIRRQAVLRSMKDVSGRVGSPIKVGELMFLTSLDVATR  202 (524)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~dvi~~  202 (524)
                      ......++..+....+|+.|+++|+.+. +.|+...+.. ..+.+.+.+.++++.+.  .+.++|+.+.+..++++++++
T Consensus        83 ~~~~~l~g~~~~~~~~g~~wr~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~vi~~  159 (452)
T PLN03141         83 KSLTELMGKSSILLINGSLQRRVHGLIG-AFLKSPHLKAQITRDMERYVSESLDSWR--DDPPVLVQDETKKIAFEVLVK  159 (452)
T ss_pred             hhHHHHhCcccccccCcHHHHHHHHHHH-HhcCcHHHHHHHHHHHHHHHHHHHHhcc--CCCCEEhHHHHHHHHHHHHHH
Confidence            2222222212223338899999999986 6777666655 35566666666666553  356899999999999999999


Q ss_pred             HHhccCCCCCCchHHHHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCC
Q 009821          203 MLWGASLRGEDWDAVAIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNE  282 (524)
Q Consensus       203 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~  282 (524)
                      ++||.+...     ....+...+.........  ....+|.      .. .++..++.+.+.+++.+.+++++.....+.
T Consensus       160 ~~~G~~~~~-----~~~~~~~~~~~~~~~~~~--~~~~~p~------~~-~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~  225 (452)
T PLN03141        160 ALISLEPGE-----EMEFLKKEFQEFIKGLMS--LPIKLPG------TR-LYRSLQAKKRMVKLVKKIIEEKRRAMKNKE  225 (452)
T ss_pred             HHcCCCchH-----HHHHHHHHHHHHhhhHHh--CccCCCc------hH-hHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence            999976532     112233333333221111  1111111      11 133446678888888888887765432110


Q ss_pred             C---CCcccHHHHHHHHhhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhc----
Q 009821          283 G---KSSKDFLQTLLELQQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVA----  355 (524)
Q Consensus       283 ~---~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~----  355 (524)
                      .   ....|+++.+++..   +..++++++.++++ .+++||+|||+.+++|++++|++||++|+|+++|++++.+    
T Consensus       226 ~~~~~~~~d~l~~ll~~~---~~~l~~~~i~~~~~-~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~~~~~  301 (452)
T PLN03141        226 EDETGIPKDVVDVLLRDG---SDELTDDLISDNMI-DMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKRLKAD  301 (452)
T ss_pred             ccccCChhhHHHHHHhcC---CCCCCHHHHHHHHH-HHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHhccCC
Confidence            1   12468999998754   24588999999988 9999999999999999999999999999999999998863    


Q ss_pred             CCCcccccccCCChhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCcc
Q 009821          356 RDSVVEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRF  435 (524)
Q Consensus       356 ~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~  435 (524)
                      .++.++.+++.+|||++|||+|+||++|+++. ++|.+.+|++++||.||||+.|+++++++||||++|+||++|+||||
T Consensus       302 ~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~-~~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~F~PeRf  380 (452)
T PLN03141        302 TGEPLYWTDYMSLPFTQNVITETLRMGNIING-VMRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQFNPWRW  380 (452)
T ss_pred             CCCCCCHHHHhccHHHHHHHHHHHhccCCcCC-cceeecCCeeECCEEECCCCEEEEehHhccCCchhcCCccccCcccc
Confidence            23457889999999999999999999999986 68999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCcccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCCCCCcccccccccccCCCceeeeecC
Q 009821          436 LEDVKIGDFRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTKFDLSDKLLMALKKSEPLVVIPTPR  515 (524)
Q Consensus       436 ~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  515 (524)
                      ++++      ..+..|+|||+|+|.|+|++||.+|+++++|.|+++|++++.++...     ...++.+..++.|++++|
T Consensus       381 l~~~------~~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~  449 (452)
T PLN03141        381 QEKD------MNNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDTIV-----NFPTVRMKRKLPIWVTRI  449 (452)
T ss_pred             cCCC------CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCCee-----ecccccCCCCceEEEEeC
Confidence            9642      12467999999999999999999999999999999999998766321     124777888999999999


Q ss_pred             CC
Q 009821          516 SL  517 (524)
Q Consensus       516 ~~  517 (524)
                      +.
T Consensus       450 ~~  451 (452)
T PLN03141        450 DD  451 (452)
T ss_pred             CC
Confidence            64


No 25 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=1.2e-70  Score=540.49  Aligned_cols=428  Identities=21%  Similarity=0.340  Sum_probs=338.7

Q ss_pred             CCCCCCCCCCCCCCceecccccC-CCChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCcccc
Q 009821           48 TRSTPPLPPGPRALPLVGNILSA-EPNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAA  126 (524)
Q Consensus        48 ~~~~~~~ppgp~~~p~iG~~~~~-~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~  126 (524)
                      .....+.||||.++|++|+++.+ ..+++.++.+++++||++|++++++.++|+++||+.+++++.++...+........
T Consensus        30 ~~~~~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~~~~~~~~  109 (463)
T PLN02196         30 SSTKLPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFKPTFPASK  109 (463)
T ss_pred             CCCCCCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCcccccCchHH
Confidence            34456779999999999998765 57889999999999999999999999999999999999999887765532211111


Q ss_pred             hhhhccCCcccccCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHHHHHHhc
Q 009821          127 ASVLTYGGKSIGASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVGELMFLTSLDVATRMLWG  206 (524)
Q Consensus       127 ~~~~~~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~dvi~~~~fG  206 (524)
                      ....+..+....+|+.|+++|+.+. +.|+...++.+.+.+.+.++++++.+.   +.++|+.+++..+++|+++.++||
T Consensus       110 ~~~~g~~~l~~~~g~~w~~~Rk~l~-~~f~~~~l~~~~~~i~~~~~~~~~~~~---~~~v~~~~~~~~~~~~v~~~~~fG  185 (463)
T PLN02196        110 ERMLGKQAIFFHQGDYHAKLRKLVL-RAFMPDAIRNMVPDIESIAQESLNSWE---GTQINTYQEMKTYTFNVALLSIFG  185 (463)
T ss_pred             HHHcCcccccccCcHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHcCC---CCeEEeHHHHHHHHHHHHHHHHcC
Confidence            1112111222338999999999997 789999999999999999999888774   457999999999999999999999


Q ss_pred             cCCCCCCchHHHHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCc
Q 009821          207 ASLRGEDWDAVAIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSS  286 (524)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~  286 (524)
                      .+.....     ..+.+.+...    ...  ...+|+.  + +....++..++.+.+.+++.+.++++++..     ...
T Consensus       186 ~~~~~~~-----~~~~~~~~~~----~~~--~~~~~~~--~-p~~~~~~~~~a~~~~~~~~~~~i~~~~~~~-----~~~  246 (463)
T PLN02196        186 KDEVLYR-----EDLKRCYYIL----EKG--YNSMPIN--L-PGTLFHKSMKARKELAQILAKILSKRRQNG-----SSH  246 (463)
T ss_pred             CCCchHH-----HHHHHHHHHH----hcc--hhccccc--C-CCccchHHHHHHHHHHHHHHHHHHHHhhcC-----CCc
Confidence            8753211     1222211111    110  1112221  1 111234566777888888888887765432     234


Q ss_pred             ccHHHHHHHHhhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcC---CCccccc
Q 009821          287 KDFLQTLLELQQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVAR---DSVVEEF  363 (524)
Q Consensus       287 ~d~l~~ll~~~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~---~~~~~~~  363 (524)
                      .|+++.+++.    +..++++++.++++ .+++||+|||+++++|++++|++||++|+|+++|++++.+.   ++.++.+
T Consensus       247 ~d~l~~ll~~----~~~l~~~ei~~~~~-~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~  321 (463)
T PLN02196        247 NDLLGSFMGD----KEGLTDEQIADNII-GVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEGESLTWE  321 (463)
T ss_pred             ccHHHHHHhc----CCCCCHHHHHHHHH-HHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccccCCCCCHH
Confidence            6899988853    24588999999988 99999999999999999999999999999999999998864   3567899


Q ss_pred             ccCCChhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCc
Q 009821          364 HLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGD  443 (524)
Q Consensus       364 ~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~  443 (524)
                      ++.+|||++|||+|+||++|++++ ..|.+.+|+.++||.||||+.|.++++++||||++|+||++|+||||+...    
T Consensus       322 ~~~~l~yl~avi~EtlRl~p~~~~-~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl~~~----  396 (463)
T PLN02196        322 DTKKMPLTSRVIQETLRVASILSF-TFREAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRFEVAP----  396 (463)
T ss_pred             HHhcChHHHHHHHHHHhcCCCccc-cceeeccccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChhhhcCCC----
Confidence            999999999999999999999998 469999999999999999999999999999999999999999999999531    


Q ss_pred             ccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCCCCCcccccccccccCCCceeeeec
Q 009821          444 FRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTKFDLSDKLLMALKKSEPLVVIPTP  514 (524)
Q Consensus       444 ~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  514 (524)
                         .+..|+|||+|+|.|+|++||++|++++++.|+++|++++.++. .+..  ...+..|+.+++|++++
T Consensus       397 ---~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~-~~~~--~~~~~~p~~~~~~~~~~  461 (463)
T PLN02196        397 ---KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTS-NGIQ--YGPFALPQNGLPIALSR  461 (463)
T ss_pred             ---CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCC-CceE--EcccccCCCCceEEEec
Confidence               24689999999999999999999999999999999999987652 2222  23344577788888765


No 26 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=1.8e-70  Score=547.11  Aligned_cols=442  Identities=21%  Similarity=0.331  Sum_probs=344.3

Q ss_pred             CCCCCCCCCCCCCCCceecccccC-----CCChhHHHHHHHHHhCC--eEEEecCCeeEEEeCCHHHHHHHHHhcccccc
Q 009821           47 PTRSTPPLPPGPRALPLVGNILSA-----EPNLHRYFTKLSQIYGP--IFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFA  119 (524)
Q Consensus        47 ~~~~~~~~ppgp~~~p~iG~~~~~-----~~~~~~~~~~~~~kyG~--i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~  119 (524)
                      ......+.||||.++|++|+++.+     +.+++.++.+++++||+  +|++++++.++++++||+.+++++.+++ .|.
T Consensus        36 ~~~~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~~-~f~  114 (490)
T PLN02302         36 LGEGQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDDD-AFE  114 (490)
T ss_pred             hccCCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCCC-ccc
Confidence            344556789999999999998765     34688899999999997  7999999999999999999999998764 354


Q ss_pred             CCCcccchhhhccCCcccccCCchHHHHHHHHHhhc-CcchhhhcHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHH
Q 009821          120 NRDPSAAASVLTYGGKSIGASPEWPKLRQVLVRETM-SNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVGELMFLTSLD  198 (524)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~~-~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~d  198 (524)
                      ++........++.......+|+.|+++|+.+. +.| +.+.++.+.+.+.+.+.++++.+..  ++.+|+.+.+..++++
T Consensus       115 ~~~~~~~~~~~g~~~~~~~~g~~w~~~R~~~~-~~f~~~~~l~~~~~~i~~~v~~~~~~~~~--~~~v~~~~~~~~~~~~  191 (490)
T PLN02302        115 PGWPESTVELIGRKSFVGITGEEHKRLRRLTA-APVNGPEALSTYIPYIEENVKSCLEKWSK--MGEIEFLTELRKLTFK  191 (490)
T ss_pred             cCCchhHHHHhccccccccCcHHHHHHHHHHH-hccCCHHHHHHHHHHHHHHHHHHHHHhcC--CCCEehHHHHHHHHHH
Confidence            44322222222211112238999999999997 666 5678999999999999999998864  4469999999999999


Q ss_pred             HHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCC
Q 009821          199 VATRMLWGASLRGEDWDAVAIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQ  278 (524)
Q Consensus       199 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~  278 (524)
                      ++++++||.++...     ...+...+.........  ....+|..       ..++..+..+.+.+++.+.++++++..
T Consensus       192 vi~~~~~G~~~~~~-----~~~~~~~~~~~~~~~~~--~~~~~p~~-------~~~~~~~~~~~l~~~~~~~i~~~~~~~  257 (490)
T PLN02302        192 IIMYIFLSSESELV-----MEALEREYTTLNYGVRA--MAINLPGF-------AYHRALKARKKLVALFQSIVDERRNSR  257 (490)
T ss_pred             HHHHHHcCCCChHH-----HHHHHHHHHHHHHHhhh--CCcCCCch-------hhHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            99999999875421     12222222222111110  00111211       123344556777788888877765443


Q ss_pred             CCCCCCCcccHHHHHHHHhhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCC-
Q 009821          279 DMNEGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARD-  357 (524)
Q Consensus       279 ~~~~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~-  357 (524)
                      .........|+++.+++..++++..++++++.++++ .+++||+|||+++++|++++|++||++|+|+|+|++++++.. 
T Consensus       258 ~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~i~~~~~-~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~~~~  336 (490)
T PLN02302        258 KQNISPRKKDMLDLLLDAEDENGRKLDDEEIIDLLL-MYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKRP  336 (490)
T ss_pred             hccCCCCcCCHHHHHHhhhccCCCCCCHHHHHHHHH-HHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCC
Confidence            211123457999999987655455689999999988 999999999999999999999999999999999999998642 


Q ss_pred             ---CcccccccCCChhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCc
Q 009821          358 ---SVVEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDR  434 (524)
Q Consensus       358 ---~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR  434 (524)
                         ..++++++.+|||++|||+|+||++|++++ .+|.+.+|++++||.||||+.|.++.+++||||++|+||++|+|||
T Consensus       337 ~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeR  415 (490)
T PLN02302        337 PGQKGLTLKDVRKMEYLSQVIDETLRLINISLT-VFREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEFDPSR  415 (490)
T ss_pred             CCCCCCCHHHHhcChHHHHHHHHHHHhCCCccc-chhcccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCccccChhh
Confidence               126889999999999999999999999998 5799999999999999999999999999999999999999999999


Q ss_pred             cccccCCCcccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCCCCCcccccccccccCCCceeeeec
Q 009821          435 FLEDVKIGDFRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTKFDLSDKLLMALKKSEPLVVIPTP  514 (524)
Q Consensus       435 ~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  514 (524)
                      |++..      ..+..|+|||+|+|.|+|++||..|++++++.|+++|++++.++. .+.  ....+..|..++.|++++
T Consensus       416 ~~~~~------~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-~~~--~~~~~~~p~~~~~~~~~~  486 (490)
T PLN02302        416 WDNYT------PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPG-CKV--MYLPHPRPKDNCLARITK  486 (490)
T ss_pred             cCCCC------CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCC-Ccc--eeCCCCCCCCCceEEEEe
Confidence            99542      234679999999999999999999999999999999999987652 222  123346677889999998


Q ss_pred             CCC
Q 009821          515 RSL  517 (524)
Q Consensus       515 r~~  517 (524)
                      |++
T Consensus       487 ~~~  489 (490)
T PLN02302        487 VAS  489 (490)
T ss_pred             ccC
Confidence            875


No 27 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=5e-70  Score=533.75  Aligned_cols=436  Identities=19%  Similarity=0.292  Sum_probs=335.6

Q ss_pred             CCCCCCCCCCCCCCceecccccCC-----CChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCC
Q 009821           48 TRSTPPLPPGPRALPLVGNILSAE-----PNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRD  122 (524)
Q Consensus        48 ~~~~~~~ppgp~~~p~iG~~~~~~-----~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~  122 (524)
                      +..+.++||||.++|++||++.+.     .+++.++.+++++||++|++++++.++++++||+.+++++.++...|.+++
T Consensus        25 ~~~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~  104 (472)
T PLN02987         25 RYRRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGKLFECSY  104 (472)
T ss_pred             ccCCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCceEEecC
Confidence            344556799999999999988752     457888999999999999999999999999999999999998877776654


Q ss_pred             cccchhhhccCCcccccCCchHHHHHHHHHhhcCcchhhhcHH-HHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHHH
Q 009821          123 PSAAASVLTYGGKSIGASPEWPKLRQVLVRETMSNTSLNSSSA-IRRQAVLRSMKDVSGRVGSPIKVGELMFLTSLDVAT  201 (524)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~-~~~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~dvi~  201 (524)
                      .......++..+....+|+.|+++|+.+. .+++...++.+.. .+.+.+...++.+    ++++++.+.+..+++++++
T Consensus       105 ~~~~~~~lg~~~l~~~~g~~wr~~R~~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~t~~vi~  179 (472)
T PLN02987        105 PGSISNLLGKHSLLLMKGNLHKKMHSLTM-SFANSSIIKDHLLLDIDRLIRFNLDSW----SSRVLLMEEAKKITFELTV  179 (472)
T ss_pred             cHHHHHHhCcccccccCcHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHHhh----ccceehHHHHHHHHHHHHH
Confidence            32223333322233348999999999975 5444444444321 1222223333333    2469999999999999999


Q ss_pred             HHHhccCCCCCCchHHHHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCC
Q 009821          202 RMLWGASLRGEDWDAVAIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMN  281 (524)
Q Consensus       202 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~  281 (524)
                      +++||.+.....     ..+...+.......    ....+|++.     ...++..+.++.+.+++.+.++++++... .
T Consensus       180 ~~~fg~~~~~~~-----~~~~~~~~~~~~~~----~~~~~p~l~-----~~~~~~~~~~~~~~~~~~~~i~~r~~~~~-~  244 (472)
T PLN02987        180 KQLMSFDPGEWT-----ESLRKEYVLVIEGF----FSVPLPLFS-----TTYRRAIQARTKVAEALTLVVMKRRKEEE-E  244 (472)
T ss_pred             HHHcCCCChHHH-----HHHHHHHHHHHhhh----hcCCCcCCC-----chHHHHHHHHHHHHHHHHHHHHHHHhhhh-c
Confidence            999997653211     12222222221111    112234331     22466777888999999999988765432 1


Q ss_pred             CCCCcccHHHHHHHHhhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcC---CC
Q 009821          282 EGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVAR---DS  358 (524)
Q Consensus       282 ~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~---~~  358 (524)
                      +.....|+++.+++..    ..++++++.+++. .+++||+|||+++++|++++|++||++|+|+++|++++.+.   +.
T Consensus       245 ~~~~~~d~l~~ll~~~----~~~~~~ei~~~~~-~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~~  319 (472)
T PLN02987        245 GAEKKKDMLAALLASD----DGFSDEEIVDFLV-ALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSY  319 (472)
T ss_pred             cCcccccHHHHHHhcC----CCCCHHHHHHHHH-HHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccCCCC
Confidence            1223579999999753    2589999999988 99999999999999999999999999999999999998752   34


Q ss_pred             cccccccCCChhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccc
Q 009821          359 VVEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLED  438 (524)
Q Consensus       359 ~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~  438 (524)
                      .++.+++.+|||++||++|+||++|+++. ++|.+.+|++++||.||||+.|.++.+.+||||++|+||++||||||++.
T Consensus       320 ~~~~~~l~~lpyl~a~i~EtLRl~p~~~~-~~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~  398 (472)
T PLN02987        320 SLEWSDYKSMPFTQCVVNETLRVANIIGG-IFRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRWQSN  398 (472)
T ss_pred             CCCHHHHhcChHHHHHHHHHHHccCCcCC-ccccCCCCeeECCEEECCCCEEEEehHHhhCCcccCCCccccCcccCCCC
Confidence            57888999999999999999999999986 68999999999999999999999999999999999999999999999964


Q ss_pred             cCCCcccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCCCCCcccccccccccCCCceeeeecCC
Q 009821          439 VKIGDFRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTKFDLSDKLLMALKKSEPLVVIPTPRS  516 (524)
Q Consensus       439 ~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  516 (524)
                      .+.   ......++|||+|+|.|||++||.+|++++++.|+++|++++.++..+.    ...+..|..++.+++++|.
T Consensus       399 ~~~---~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~----~~~~~~p~~~~~~~~~~r~  469 (472)
T PLN02987        399 SGT---TVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQDKLV----FFPTTRTQKRYPINVKRRD  469 (472)
T ss_pred             CCC---CCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCCcee----ecccccCCCCceEEEEecc
Confidence            321   1124579999999999999999999999999999999999987764322    2447778888999999985


No 28 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=3.6e-70  Score=540.27  Aligned_cols=448  Identities=22%  Similarity=0.355  Sum_probs=345.1

Q ss_pred             CCCCCCCceecccccC-----CCChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCcccchhh
Q 009821           55 PPGPRALPLVGNILSA-----EPNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAAASV  129 (524)
Q Consensus        55 ppgp~~~p~iG~~~~~-----~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~~~  129 (524)
                      -.|-.+||++|+.+++     ++..+..+.+|+++||++|++++|+.++++++||+++++|+.+.+..|.++........
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~~   93 (489)
T PLN02936         14 WGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVSEF   93 (489)
T ss_pred             CCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhhHH
Confidence            4467789999998765     56789999999999999999999999999999999999999887666766543322221


Q ss_pred             hccCCcccccCCchHHHHHHHHHhhcCcchhhhcHH-HHHHHHHHHHHHHhcc--CCCceehhHHHHHHHHHHHHHHHhc
Q 009821          130 LTYGGKSIGASPEWPKLRQVLVRETMSNTSLNSSSA-IRRQAVLRSMKDVSGR--VGSPIKVGELMFLTSLDVATRMLWG  206 (524)
Q Consensus       130 ~~~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~-~~~~~~~~l~~~l~~~--~~~~vd~~~~~~~~~~dvi~~~~fG  206 (524)
                      ....+....+|+.|+++|+.+. +.|+...+..+.+ ++.++++.+++.+.+.  .+.++|+.+.+..+++|+++.++||
T Consensus        94 ~~~~~i~~~~g~~wk~~Rk~l~-~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi~~~~fG  172 (489)
T PLN02936         94 LFGSGFAIAEGELWTARRRAVV-PSLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDVIGLSVFN  172 (489)
T ss_pred             HhcCccccCCchHHHHHHHhhc-CccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHHcC
Confidence            2222333348999999999997 8888888877654 6788888888888654  4678999999999999999999999


Q ss_pred             cCCCCCCchHHHHHHHHHHHHHHHHhcCCCcccccccc-----cccCccchHHHHHHHHHHHHHHHHHhhccccCCCC--
Q 009821          207 ASLRGEDWDAVAIQFREVLEEMFQVLGSGNISDLFPLL-----TRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQD--  279 (524)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l-----~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~--  279 (524)
                      .+++..+.+   .++...+...+..... .....+|++     .++.  ...++..++.+.+.+++.+.++++++..+  
T Consensus       173 ~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~l~~~~--p~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~  246 (489)
T PLN02936        173 YNFDSLTTD---SPVIQAVYTALKEAET-RSTDLLPYWKVDFLCKIS--PRQIKAEKAVTVIRETVEDLVDKCKEIVEAE  246 (489)
T ss_pred             CCccccccC---cHHHHHHHHHHHHHHH-hhhccchHHhhHHHhccC--hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            998764322   1233333322221111 111123322     1111  12345566677777777777765443211  


Q ss_pred             -C----CC--CCCcccHHHHHHHHhhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHH
Q 009821          280 -M----NE--GKSSKDFLQTLLELQQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQ  352 (524)
Q Consensus       280 -~----~~--~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~  352 (524)
                       .    .+  .....|+++.|++..    ..++++++.++++ .+++||+||||++++|++++|++||++|+|+|+|+++
T Consensus       247 ~~~~~~~~~~~~~~~d~l~~ll~~~----~~~~~~~i~~~~~-~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~Ei~~  321 (489)
T PLN02936        247 GEVIEGEEYVNDSDPSVLRFLLASR----EEVSSVQLRDDLL-SMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEELDR  321 (489)
T ss_pred             ccccccccccccCchHHHHHHHhcc----ccCCHHHHHHHHH-HHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence             0    00  123468999998754    2478999999999 9999999999999999999999999999999999999


Q ss_pred             hhcCCCcccccccCCChhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCC
Q 009821          353 VVARDSVVEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQP  432 (524)
Q Consensus       353 ~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~P  432 (524)
                      +++. +.++++++.+||||+|||+||||++|+++...+|.+.+|+.++||.||+|+.|.++.+++||||++||||++|+|
T Consensus       322 ~~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~P  400 (489)
T PLN02936        322 VLQG-RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWERAEEFVP  400 (489)
T ss_pred             HhcC-CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhhCCCccccCc
Confidence            9874 457889999999999999999999999998777777788888999999999999999999999999999999999


Q ss_pred             CccccccCCCcccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCCCCCcccccccccccCCCceeee
Q 009821          433 DRFLEDVKIGDFRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTKFDLSDKLLMALKKSEPLVVIP  512 (524)
Q Consensus       433 eR~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  512 (524)
                      |||+..++.......+..|+|||+|+|.|||++||++|+++++++|+++|+++++++.++..  ..+.+..++.+++|++
T Consensus       401 eRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~~--~~~~~~~~~~~~~v~~  478 (489)
T PLN02936        401 ERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQDIVM--TTGATIHTTNGLYMTV  478 (489)
T ss_pred             cccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCCccce--ecceEEeeCCCeEEEE
Confidence            99996432111122345899999999999999999999999999999999999987654432  2345566778899999


Q ss_pred             ecCCC
Q 009821          513 TPRSL  517 (524)
Q Consensus       513 ~~r~~  517 (524)
                      ++|.-
T Consensus       479 ~~R~~  483 (489)
T PLN02936        479 SRRRV  483 (489)
T ss_pred             EeeeC
Confidence            98864


No 29 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.7e-69  Score=484.93  Aligned_cols=439  Identities=23%  Similarity=0.390  Sum_probs=347.1

Q ss_pred             CCCCceecccccCCCChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCcccchhhhccCCccc
Q 009821           58 PRALPLVGNILSAEPNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAAASVLTYGGKSI  137 (524)
Q Consensus        58 p~~~p~iG~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~~~~~~~~~~~  137 (524)
                      -.++|++|++..++.++.++++++++|||+||++.++|+.+.++.||+....+++++...++-........ ...-|.++
T Consensus        37 ~gwiP~lG~a~~fgk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~-~~vFg~~v  115 (486)
T KOG0684|consen   37 KGWIPWLGSALAFGKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLT-TPVFGKGV  115 (486)
T ss_pred             ccCcchhhHHHHhccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhh-hhhcCCCc
Confidence            45799999999999999999999999999999999999999999999999999988744343322221111 11112222


Q ss_pred             c---cCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHH-HhccCCCceehhHHHHHHHHHHHHHHHhccCCCCCC
Q 009821          138 G---ASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKD-VSGRVGSPIKVGELMFLTSLDVATRMLWGASLRGED  213 (524)
Q Consensus       138 ~---~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~-l~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~  213 (524)
                      .   +.....++-+.+. ..+....++++.+.+.+++.+.+.. +.+ +|..-.+..++..+.+.+.-.++||......+
T Consensus       116 ~~d~~~~~~~e~~~~~k-~~L~~~~lk~~~e~m~~el~~~f~~~~~~-s~~~d~l~~~~~~ii~tAs~~ll~~e~r~~~d  193 (486)
T KOG0684|consen  116 VYDVPNHVMMEQKKFFK-SALGGVALKSLVELMLEELHAYFETSLGE-SGETDGLYTFCRLIIFTASRLLLGGEVRDQLD  193 (486)
T ss_pred             cccCCCchHHHHHHHHH-HHhchhhHHHHHHHHHHHHHHHHhccccc-ccchhHhhhhhHHHhhhhHHHhhhhhhhhhhc
Confidence            2   4445556666664 7788899999999999999998887 433 55666677888888888777777777655433


Q ss_pred             chHHHHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcccHHHHH
Q 009821          214 WDAVAIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSSKDFLQTL  293 (524)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~l  293 (524)
                      .     +....+.+....+.  .+...||.  +++. ...++..++++.+.+.+.+.+.++++..    +....|+++.+
T Consensus       194 ~-----~~a~l~~dLd~~F~--~~d~~FP~--~LP~-~~~r~~~ra~~~i~k~f~~~i~~rr~s~----s~~~~dmlq~l  259 (486)
T KOG0684|consen  194 A-----DVAKLYHDLDQGFQ--PFDFLFPY--NLPI-PLLRRRDRARKKISKIFSKIILDRRASI----SKWDNDMLQSL  259 (486)
T ss_pred             c-----hHHHHHHHHhcccc--chHhhccc--CCCc-chhhhHHHHHHHHHHHHHHHHHHHHhcc----ccccHHHHHHH
Confidence            2     22222222222111  22334563  2221 2245556889999999999999888764    34567999999


Q ss_pred             HHHhhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCc-ccccccCCChhHH
Q 009821          294 LELQQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSV-VEEFHLAKLPYLE  372 (524)
Q Consensus       294 l~~~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~-~~~~~l~~lpyl~  372 (524)
                      ++ ..+++...+++|+....+ .++|||+.||++|.+|++++|++|||+++++++|+.+++|.+.. .++++|++||.|+
T Consensus       260 ~~-~y~dg~~~te~e~a~~li-~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~~l~~d~L~~lplL~  337 (486)
T KOG0684|consen  260 ME-KYKDGRPTTEEEIAGLLI-GLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKKEKLTYDQLKDLPLLD  337 (486)
T ss_pred             HH-HhhcCCcCcHHHHHHHHH-HHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccCCCCCHHHHhcchHHH
Confidence            99 444556788888877777 99999999999999999999999999999999999999987654 8999999999999


Q ss_pred             HHHHhhhcCCCCCCCcCccccCCCccccc----eeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCcccCCc
Q 009821          373 AIVKETLRLHPPAPLLTSRRPSATSNLSG----YTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGDFRGNN  448 (524)
Q Consensus       373 a~i~E~lRl~p~~~~~~~R~~~~~~~~~g----~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~~~~~  448 (524)
                      +||+|||||+||.+. +.|.+.+|+++-+    |.||+|..|.++++.+|+||++|+||+.|+|+||++++++.+..+..
T Consensus       338 ~~IkEtLRL~~p~~~-~~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~~~~~~k~g~k  416 (486)
T KOG0684|consen  338 SCIKETLRLHPPAHS-LMRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKDNGESKKNGEK  416 (486)
T ss_pred             HHHHHHHhcCCchhh-HHHhhccceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhccCCCccccccccc
Confidence            999999999999888 6799999999855    99999999999999999999999999999999999876543222222


Q ss_pred             --cceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCCCCCcccccccccccCCCceeeeecCCC
Q 009821          449 --FNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTKFDLSDKLLMALKKSEPLVVIPTPRSL  517 (524)
Q Consensus       449 --~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~  517 (524)
                        +.++|||+|.|.|||++||.+|+++++..+|++||+++.+| +++..+...+++.|.++++|+.++|+.
T Consensus       417 l~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~-~~P~~d~s~~v~~P~g~v~irYK~R~~  486 (486)
T KOG0684|consen  417 LDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDG-PFPEVDYSRMVMQPEGDVRIRYKRRPL  486 (486)
T ss_pred             ccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCC-CCCCCCHHHhhcCCCCCceEEEeecCC
Confidence              44699999999999999999999999999999999999998 555555566799999999999999863


No 30 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=2.1e-67  Score=519.21  Aligned_cols=438  Identities=18%  Similarity=0.236  Sum_probs=331.4

Q ss_pred             CceecccccCCCChhHHHHHHHHHhC-CeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCccc-chhhhccCCcccc
Q 009821           61 LPLVGNILSAEPNLHRYFTKLSQIYG-PIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSA-AASVLTYGGKSIG  138 (524)
Q Consensus        61 ~p~iG~~~~~~~~~~~~~~~~~~kyG-~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~-~~~~~~~~~~~~~  138 (524)
                      .++.|++...-.+.+..+..+.++++ .+++++.++.  ++++||+.+++|+..+...|.+..... ......+.+....
T Consensus        49 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~g~gi~~~  126 (502)
T PLN02426         49 AYLTASWAKDFDNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDLLGRGIFNV  126 (502)
T ss_pred             CCccHHHHHhcccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHhcCCceeec
Confidence            56888887654456777777888887 5777776554  899999999999987755566544321 1112222333333


Q ss_pred             cCCchHHHHHHHHHhhcCcchhhhcH--HHHHHHHHHHHHHHhcc----CCCceehhHHHHHHHHHHHHHHHhccCCCCC
Q 009821          139 ASPEWPKLRQVLVRETMSNTSLNSSS--AIRRQAVLRSMKDVSGR----VGSPIKVGELMFLTSLDVATRMLWGASLRGE  212 (524)
Q Consensus       139 ~~~~w~~~R~~~~~~~~~~~~l~~~~--~~~~~~~~~l~~~l~~~----~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~  212 (524)
                      +|+.|+++||.+. +.|+...++.+.  +.+.+..+++++.+.+.    .+.++|+.+++..+++|+|++++||.+++..
T Consensus       127 ~g~~wk~~Rk~l~-~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~l  205 (502)
T PLN02426        127 DGDSWRFQRKMAS-LELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLDPGCL  205 (502)
T ss_pred             CcHHHHHHHHHhH-hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCCCccc
Confidence            8999999999996 889988888764  56667677777666542    2467999999999999999999999988654


Q ss_pred             CchHHHHHHHHHHHHHHHHhcCCCccccccccc---ccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcccH
Q 009821          213 DWDAVAIQFREVLEEMFQVLGSGNISDLFPLLT---RFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSSKDF  289 (524)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~---~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~  289 (524)
                      +.+....++.++++.+....... ....+|++.   .+...+..++..+..+.+.+++.+.++++++..    .....|+
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~----~~~~~dl  280 (502)
T PLN02426        206 ELSLPISEFADAFDTASKLSAER-AMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLG----FSASKDL  280 (502)
T ss_pred             CCCCCccHHHHHHHHHHHHHHHH-HhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhcc----cCCcchH
Confidence            32111234545444433211100 011112211   111123346677788889999999998876542    1235799


Q ss_pred             HHHHHHHhhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCC-CcccccccCCC
Q 009821          290 LQTLLELQQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARD-SVVEEFHLAKL  368 (524)
Q Consensus       290 l~~ll~~~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~-~~~~~~~l~~l  368 (524)
                      ++.+++..      .+++++.+++. .+++||+|||+++++|++++|++||++|+|+|+|++++.+.+ ..++++++++|
T Consensus       281 l~~ll~~~------~~~~~l~~~~~-~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~t~~~l~~L  353 (502)
T PLN02426        281 LSRFMASI------NDDKYLRDIVV-SFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAASFEEMKEM  353 (502)
T ss_pred             HHHHHhcC------CCHHHHHHHHH-HHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCCCHHHHhcC
Confidence            99999743      26788999988 999999999999999999999999999999999999998753 36799999999


Q ss_pred             hhHHHHHHhhhcCCCCCCCcCccccCCCccc-cceeeCCCCEEEeehhhhccCCCCC-CCCCCCCCCccccccCCCcccC
Q 009821          369 PYLEAIVKETLRLHPPAPLLTSRRPSATSNL-SGYTIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLEDVKIGDFRG  446 (524)
Q Consensus       369 pyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~-~g~~ip~G~~v~~~~~~~h~d~~~~-~dp~~F~PeR~~~~~~~~~~~~  446 (524)
                      |||+|||+|+||++|+++. ..|.+.+|..+ +|+.||+|+.|.++++++||||++| |||++|+||||++++..  ...
T Consensus       354 pYl~avi~EtLRl~p~v~~-~~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~~--~~~  430 (502)
T PLN02426        354 HYLHAALYESMRLFPPVQF-DSKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGVF--VPE  430 (502)
T ss_pred             hHHHHHHHHHHhCCCCCCC-cceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCCc--CCC
Confidence            9999999999999999998 46988888776 9999999999999999999999999 99999999999963211  112


Q ss_pred             CccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCCCCCcccccccccccCCCceeeeecCC
Q 009821          447 NNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTKFDLSDKLLMALKKSEPLVVIPTPRS  516 (524)
Q Consensus       447 ~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  516 (524)
                      .+..|+|||+|+|.|+|++||.+|++++++.|+++|++++.++.........+.+..++.+++|++++|.
T Consensus       431 ~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~r~  500 (502)
T PLN02426        431 NPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSNRAPRFAPGLTATVRGGLPVRVRERV  500 (502)
T ss_pred             CCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCCCCCcccceeEEecCCCEEEEEEEcc
Confidence            3467999999999999999999999999999999999998654221112233577788889999999885


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=3e-60  Score=460.64  Aligned_cols=405  Identities=17%  Similarity=0.247  Sum_probs=295.8

Q ss_pred             CCCCCCCCCCCCCceecccccC-----CCChhHHHHHHHHHhCC-eEEEecCCeeE-------EEeCCHHHHHHHHHh--
Q 009821           49 RSTPPLPPGPRALPLVGNILSA-----EPNLHRYFTKLSQIYGP-IFKFYLGRKLC-------IVIGSPSLAKQVLKE--  113 (524)
Q Consensus        49 ~~~~~~ppgp~~~p~iG~~~~~-----~~~~~~~~~~~~~kyG~-i~~~~~g~~~~-------vvv~dp~~i~~il~~--  113 (524)
                      ..+.+.|||+.++|++|+++++     ..++..++.+.++|||+ ||+++++|.++       |+++||++++.+|.+  
T Consensus        13 ~~~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~   92 (480)
T PLN02648         13 SLPLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSK   92 (480)
T ss_pred             CCCCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchh
Confidence            3455679999999999999754     45568999999999999 99999988655       999999999999985  


Q ss_pred             --ccccccCCCcccchhhhccCC-cccc--cCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhcc--CCCce
Q 009821          114 --HDVVFANRDPSAAASVLTYGG-KSIG--ASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGR--VGSPI  186 (524)
Q Consensus       114 --~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~--~~~~v  186 (524)
                        ++..+........ ..++... .++.  +|+.|+++|+.+. +.|+ ..++.+.+.+.+.+.++++.|...  .+.+|
T Consensus        93 ~~~~~~~~~~~~~~~-~l~G~~~~~s~~~~~g~~H~r~Rrll~-~~f~-~~~~~~~~~m~~~~~~~~~~w~~~~~~~~~v  169 (480)
T PLN02648         93 VDKRDVFTGTYMPST-AFTGGYRVLSYLDPSEPKHAKLKSFLF-ELLK-SRHRRFIPEFRAAFAELFDTWEAELAKKGKA  169 (480)
T ss_pred             ccccccceeeeccCc-cccCCceeeeecCCCCchHHHHHHHHH-HHHH-HhhhhhhhHHHHHHHHHHHHHHHHHhhCCCc
Confidence              4443444333222 2322110 0332  8899999999997 8888 477889999999999999999542  34579


Q ss_pred             ehhHHHHHHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHH
Q 009821          187 KVGELMFLTSLDVATRMLWGASLRGEDWDAVAIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKI  266 (524)
Q Consensus       187 d~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~  266 (524)
                      |+.+.+..+++|++++++||.+.+...   ....+...........       .+|....               .+...
T Consensus       170 dv~~~~~~lt~~vi~~~lfG~~~~~~~---l~~~~~~~~~~~~~~~-------~~p~~~~---------------~l~~~  224 (480)
T PLN02648        170 EFNDPLDQMAFNFLCKALTGKDPSETA---LGSDGPALIQKWLALQ-------LAPLAST---------------GLPHV  224 (480)
T ss_pred             cccchHHHHHHHHHHHHHcCCCcchhh---hccchhHHHHHHHHHH-------hhHHHHc---------------CchHH
Confidence            999999999999999999998765421   1122222222211100       0111100               00111


Q ss_pred             HHHhhccccCCCCCCCCCCcccH-------HHHHHHHhhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhC
Q 009821          267 FESLLRPGQSGQDMNEGKSSKDF-------LQTLLELQQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQK  339 (524)
Q Consensus       267 ~~~~i~~~~~~~~~~~~~~~~d~-------l~~ll~~~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~  339 (524)
                      +++.+.++.............++       +..+++...+  .+++++|+++++++.+.+++++||+++++|++++|++|
T Consensus       225 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~--~~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~~L~~~  302 (480)
T PLN02648        225 LEELLLHTFPLPFFLVKSDYDKLYDFFRASATEALDLAEK--FGISREEALHNLLFVLGFNAFGGFKIFFPALLKWVGRA  302 (480)
T ss_pred             HHHHhhcccCCchhhhhccHHHHHHHHHHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcC
Confidence            11111111000000000011122       2244443333  34999999999874466788888899999999999999


Q ss_pred             cH-HHHHHHHHHHHhhcC-CCcccccccCCChhHHHHHHhhhcCCCCCCCcCccccCCCcccc----ceeeCCCCEEEee
Q 009821          340 PE-VMRKARNELEQVVAR-DSVVEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLS----GYTIPKGSTIFIN  413 (524)
Q Consensus       340 pe-~~~klr~Ei~~~~~~-~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~----g~~ip~G~~v~~~  413 (524)
                      |+ +|+|+|+|++++++. ++.++++++.+|||+++||+|+||++|++++ ..|.+.+|++++    ||.||||+.|.++
T Consensus       303 p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~-~~r~a~~d~~l~~~~~g~~IpkG~~V~~~  381 (480)
T PLN02648        303 GEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPF-QYGRAREDFVIESHDAAFEIKKGEMLFGY  381 (480)
T ss_pred             CHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCccc-ccceecCCEEEecCCceEEECCCCEEEEC
Confidence            95 999999999999863 4568999999999999999999999999998 568899999995    7999999999999


Q ss_pred             hhhhccCCCCCCCCCCCCCCccccccCCCcccCCccceeec---------CCCCCCCCCHHHHHHHHHHHHHHHhhhce-
Q 009821          414 AWAIQRNPEVWENPQDFQPDRFLEDVKIGDFRGNNFNYLPF---------GSGRRICPGIPLAEKIVPHVLANLLHLFE-  483 (524)
Q Consensus       414 ~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~~~~~~~~~pF---------g~G~r~C~G~~~A~~e~~~~l~~ll~~f~-  483 (524)
                      .+.+||||++|+||++||||||+++++.     ....+++|         |+|+|.|||++||+.|+++++++|+++|+ 
T Consensus       382 ~~~~hrdp~~~~dP~~F~PeRf~~~~~~-----~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~f~~  456 (480)
T PLN02648        382 QPLVTRDPKVFDRPEEFVPDRFMGEEGE-----KLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELFLRYDS  456 (480)
T ss_pred             hHHHhCCcccCCCcceeCCCCCCCCCcc-----ccccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHHHHhCE
Confidence            9999999999999999999999864321     11233333         67889999999999999999999999998 


Q ss_pred             eeCCCC
Q 009821          484 WSLPEG  489 (524)
Q Consensus       484 ~~~~~~  489 (524)
                      +++.++
T Consensus       457 ~~l~~~  462 (480)
T PLN02648        457 FEIEVD  462 (480)
T ss_pred             EeecCC
Confidence            998776


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=4.6e-54  Score=413.01  Aligned_cols=380  Identities=26%  Similarity=0.393  Sum_probs=301.2

Q ss_pred             hhHHHHHHHHHhCCeEEEecCCee--EEEeCCHHHHHHHHHhccccccCCCcccchh--hhccCCc--c-cccCCchHHH
Q 009821           74 LHRYFTKLSQIYGPIFKFYLGRKL--CIVIGSPSLAKQVLKEHDVVFANRDPSAAAS--VLTYGGK--S-IGASPEWPKL  146 (524)
Q Consensus        74 ~~~~~~~~~~kyG~i~~~~~g~~~--~vvv~dp~~i~~il~~~~~~~~~~~~~~~~~--~~~~~~~--~-~~~~~~w~~~  146 (524)
                      .......+.+.||.++.....+..  .+++++|+.++++++++.. +++........  .....+.  . ..+|+.|.++
T Consensus        24 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~  102 (411)
T COG2124          24 PRFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPRF-FSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRL  102 (411)
T ss_pred             hhhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCccc-ccccccccccccchhhhccccceeecCCHHHHHH
Confidence            344556677888888888776554  7999999999999998751 22222111110  1111122  2 2399999999


Q ss_pred             HHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHHHHHHhccCCCCCCchHHHHHHHHHHH
Q 009821          147 RQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVGELMFLTSLDVATRMLWGASLRGEDWDAVAIQFREVLE  226 (524)
Q Consensus       147 R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~  226 (524)
                      ||.+. +.|+++.++.+.+.+.+.++++++.+ ... +.+++.+.+..+++++|+ .+||.+..+..      .+.....
T Consensus       103 Rkl~~-~~F~~~~~~~~~~~i~~~~~~~~~~~-~~~-~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~~------~~~~~~~  172 (411)
T COG2124         103 RKLLA-PAFTPRALRGYRPLIREIADRLLDDL-WQG-GADLVLDFAAELTLRVIA-ELLGVPLEDRP------QLLRWSD  172 (411)
T ss_pred             HHHhc-cccCHHHHHHHHHHHHHHHHHHHHhc-ccC-CchhHHHHhhhhhHHHHH-HHhCCCHHHHH------HHHHHHH
Confidence            99997 89999999999999999999999999 423 778899999999999999 99998765332      2222222


Q ss_pred             HHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcccHHHHHHHHhhcCCCCCcH
Q 009821          227 EMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSSKDFLQTLLELQQQGDYSLSM  306 (524)
Q Consensus       227 ~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~l~~  306 (524)
                      .....        ..|...   ......+..++...+.+++.+.|++++.+       ..+|+++.|+.+.++++..+++
T Consensus       173 ~~~~~--------~~~~~~---~~~~~~~~~~a~~~~~~~~~~li~~rR~~-------~~~dlls~l~~a~~~~~~~lsd  234 (411)
T COG2124         173 ALLLR--------LDPDLG---PEEPWRRARAARRELDAYLRALIAERRAA-------PRDDLLSLLLSAEDDGGGRLSD  234 (411)
T ss_pred             HHHhc--------cCcccC---CcccHHHHHHHHHHHHHHHHHHHHHhccC-------CcccHHHHHHHHhhCCCCcCCH
Confidence            22111        001111   11224567788899999999999998733       4579999999988876557999


Q ss_pred             HHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcccccccCCChhHHHHHHhhhcCCCCCC
Q 009821          307 DQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLPYLEAIVKETLRLHPPAP  386 (524)
Q Consensus       307 ~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~  386 (524)
                      +|+.++++ ++++||+|||+++++|+++.|++||++++++++|.+.                ||++++++|+||++||++
T Consensus       235 ~Ei~~~~~-~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~----------------~~~~~~v~E~LR~~ppv~  297 (411)
T COG2124         235 DEIRDELI-TLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR----------------PLLEAVVEETLRLYPPVP  297 (411)
T ss_pred             HHHHHHHH-HHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch----------------HHHHHHHHHHHHhCCchh
Confidence            99999999 9999999999999999999999999999999999976                799999999999999999


Q ss_pred             CcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCcccCCccceeecCCCCCCCCCHHH
Q 009821          387 LLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGDFRGNNFNYLPFGSGRRICPGIPL  466 (524)
Q Consensus       387 ~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~  466 (524)
                      . ..|.+.+|++++|+.||||+.|.+++++.||||++|+||++|||+||.            ..++|||+|+|.|+|..|
T Consensus       298 ~-~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~------------~~~l~FG~G~H~ClG~~l  364 (411)
T COG2124         298 L-ARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN------------NAHLPFGGGPHRCLGAAL  364 (411)
T ss_pred             c-cceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC------------CCCcCCCCCCccccCHHH
Confidence            9 889999999999999999999999999999999999999999999987            359999999999999999


Q ss_pred             HHHHHHHHHHHHhhhceeeCCCCCCCCcccccccccccCCCceeeeecC
Q 009821          467 AEKIVPHVLANLLHLFEWSLPEGTKFDLSDKLLMALKKSEPLVVIPTPR  515 (524)
Q Consensus       467 A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  515 (524)
                      |++|++++++.++++|+.....+ .  .......+..+..+..+.++.+
T Consensus       365 A~~E~~~~l~~ll~r~~~~~~~~-~--~~~~~~~~~~~~g~~~l~v~~~  410 (411)
T COG2124         365 ARLELKVALAELLRRFPLLLLAE-P--PPLVRRPTLVPRGGERLPVRRR  410 (411)
T ss_pred             HHHHHHHHHHHHHHhCchhhcCC-C--CCccccccccCCCcceeeeecC
Confidence            99999999999999999887665 2  1122344444555566665544


No 33 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=58.59  E-value=9.7  Score=24.71  Aligned_cols=24  Identities=25%  Similarity=0.469  Sum_probs=18.6

Q ss_pred             HHHHHhhCcHHHHHHHHHHHHhhc
Q 009821          332 AMSELLQKPEVMRKARNELEQVVA  355 (524)
Q Consensus       332 ~l~~L~~~pe~~~klr~Ei~~~~~  355 (524)
                      .+-+|.+||++.+++.+.=...+|
T Consensus         5 iV~YLv~nPevl~kl~~g~asLIG   28 (57)
T PF05952_consen    5 IVNYLVQNPEVLEKLKEGEASLIG   28 (57)
T ss_pred             HHHHHHHChHHHHHHHcCCeeEec
Confidence            567999999999999875544443


No 34 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=54.07  E-value=9.2  Score=25.08  Aligned_cols=7  Identities=43%  Similarity=1.094  Sum_probs=5.9

Q ss_pred             CCCcccc
Q 009821          431 QPDRFLE  437 (524)
Q Consensus       431 ~PeR~~~  437 (524)
                      ||||||.
T Consensus        44 DPERWLP   50 (59)
T PF08492_consen   44 DPERWLP   50 (59)
T ss_pred             CccccCc
Confidence            8999984


No 35 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=53.14  E-value=3.2  Score=35.31  Aligned_cols=42  Identities=21%  Similarity=0.290  Sum_probs=31.1

Q ss_pred             hhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEe
Q 009821          369 PYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFI  412 (524)
Q Consensus       369 pyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~  412 (524)
                      ..+.|||.|+.-.....-  +.=+..+|+.++|..||||+.|+.
T Consensus        53 n~I~A~V~~~qtv~~Gs~--vrlRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   53 NTIRAVVDGTQTVVDGSR--VRLRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CeEEEEEecceEEeCCCE--EEEEEcCceEECCEEeCCCCEEEE
Confidence            355689999987764332  222567899999999999999765


No 36 
>PF15330 SIT:  SHP2-interacting transmembrane adaptor protein, SIT
Probab=47.07  E-value=46  Score=25.16  Aligned_cols=11  Identities=27%  Similarity=0.268  Sum_probs=7.4

Q ss_pred             CCceecccccC
Q 009821           60 ALPLVGNILSA   70 (524)
Q Consensus        60 ~~p~iG~~~~~   70 (524)
                      .-|+.||+-..
T Consensus        45 ~~p~YgNL~~~   55 (107)
T PF15330_consen   45 DDPCYGNLELQ   55 (107)
T ss_pred             CCccccccccc
Confidence            47888886543


No 37 
>PTZ00370 STEVOR; Provisional
Probab=44.94  E-value=23  Score=31.74  Aligned_cols=19  Identities=26%  Similarity=0.609  Sum_probs=10.4

Q ss_pred             HHHHHHHHHHHHHhhcCCC
Q 009821           30 LLAATFAISCYAWFIKKPT   48 (524)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~   48 (524)
                      ++++++++++|.|+++||.
T Consensus       265 lil~vvliilYiwlyrrRK  283 (296)
T PTZ00370        265 LILAVVLIILYIWLYRRRK  283 (296)
T ss_pred             HHHHHHHHHHHHHHHHhhc
Confidence            3444455556667665554


No 38 
>PF14459 Prok-E2_C:  Prokaryotic E2 family C
Probab=44.31  E-value=9.5  Score=28.10  Aligned_cols=92  Identities=21%  Similarity=0.298  Sum_probs=45.6

Q ss_pred             hHHHHHHhhhcCCCCCCCcCc---------------cccCCCccc--cceeeCCCCEEEeehhhhccCCCCCCCCCCCCC
Q 009821          370 YLEAIVKETLRLHPPAPLLTS---------------RRPSATSNL--SGYTIPKGSTIFINAWAIQRNPEVWENPQDFQP  432 (524)
Q Consensus       370 yl~a~i~E~lRl~p~~~~~~~---------------R~~~~~~~~--~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~P  432 (524)
                      -+|-+|+=.-||||...+...               |....+.++  .|-. |.-.+|.-.+..--+.+.+|-.-|-|. 
T Consensus        15 ~lDL~vRLlARLYP~l~ilp~g~as~~~a~~l~~LA~sINp~I~i~r~G~s-~~~clV~G~trp~~sc~~fFiGSdGW~-   92 (131)
T PF14459_consen   15 SLDLVVRLLARLYPKLCILPSGEASSFQAQNLQSLARSINPRIEIRRSGSS-PMHCLVIGSTRPKISCPRFFIGSDGWI-   92 (131)
T ss_pred             HHHHHHHHHHHhcceEEEeecchhHHHHHHHHHHHHHhcCCCeEEEecCCC-ceEEEEecCCCCCcccceEEEcCCcee-
Confidence            356677777888887544211               122223333  1111 333344444444444555553222211 


Q ss_pred             CccccccCCCcccCCccceeecCCCCCCCCCHHHH
Q 009821          433 DRFLEDVKIGDFRGNNFNYLPFGSGRRICPGIPLA  467 (524)
Q Consensus       433 eR~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A  467 (524)
                      -|+.+.++    .+.....+|||.|.-.|+|.--.
T Consensus        93 Ak~S~t~P----vg~gss~~p~GaGaAaC~aAaNv  123 (131)
T PF14459_consen   93 AKFSPTEP----VGCGSSNNPFGAGAAACFAAANV  123 (131)
T ss_pred             eecccCCC----cccCcccCCcCccHHHHHHHHHH
Confidence            12222211    23345789999999999886433


No 39 
>PRK06789 flagellar motor switch protein; Validated
Probab=43.88  E-value=20  Score=24.83  Aligned_cols=39  Identities=15%  Similarity=0.174  Sum_probs=31.7

Q ss_pred             HHhhhcCCCCCCCcCccccCCCcc--ccceeeCCCCEEEee
Q 009821          375 VKETLRLHPPAPLLTSRRPSATSN--LSGYTIPKGSTIFIN  413 (524)
Q Consensus       375 i~E~lRl~p~~~~~~~R~~~~~~~--~~g~~ip~G~~v~~~  413 (524)
                      ++|.+.+.+..-+-+-|.+.+++.  ++|..|.+|..|.+.
T Consensus        22 i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~   62 (74)
T PRK06789         22 IEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN   62 (74)
T ss_pred             HHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence            789999998776666788877664  499999999998764


No 40 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=37.22  E-value=33  Score=26.92  Aligned_cols=23  Identities=17%  Similarity=0.355  Sum_probs=16.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHHhhh
Q 009821          459 RICPGIPLAEKIVPHVLANLLHL  481 (524)
Q Consensus       459 r~C~G~~~A~~e~~~~l~~ll~~  481 (524)
                      -.|.|++||..++-.++.+++..
T Consensus        18 yN~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   18 YNCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             EETTS----HHHHHHHHHHHHHS
T ss_pred             ecccchHHHHHHHHHHHHHHhcC
Confidence            46999999999999999999874


No 41 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=36.64  E-value=16  Score=23.25  Aligned_cols=11  Identities=45%  Similarity=0.936  Sum_probs=9.0

Q ss_pred             eecCCCCCCCC
Q 009821          452 LPFGSGRRICP  462 (524)
Q Consensus       452 ~pFg~G~r~C~  462 (524)
                      -+||-|.|.|-
T Consensus        12 ~kfg~GsrsC~   22 (56)
T KOG3506|consen   12 RKFGQGSRSCR   22 (56)
T ss_pred             cccCCCCccee
Confidence            37999999984


No 42 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=36.12  E-value=1.1e+02  Score=19.17  Aligned_cols=41  Identities=17%  Similarity=0.194  Sum_probs=27.2

Q ss_pred             HHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHH
Q 009821          309 IKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNEL  350 (524)
Q Consensus       309 i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei  350 (524)
                      +...+. .++-.|-|-.+-.++-.+.+.--||+.+..+-.|+
T Consensus         7 ~l~eiS-~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    7 VLHEIS-DLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHH-HHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            334444 45555666666666666666666999988888776


No 43 
>PF06024 DUF912:  Nucleopolyhedrovirus protein of unknown function (DUF912);  InterPro: IPR009261 This entry is represented by Autographa californica nuclear polyhedrosis virus (AcMNPV), Orf78; it is a family of uncharacterised viral proteins.
Probab=33.83  E-value=31  Score=25.82  Aligned_cols=29  Identities=14%  Similarity=0.226  Sum_probs=13.7

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHhhcCCCC
Q 009821           21 ITSCGVVSILLAATFAISCYAWFIKKPTR   49 (524)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   49 (524)
                      +..+.+++++++++++++++.++..|.+.
T Consensus        63 iili~lls~v~IlVily~IyYFVILRer~   91 (101)
T PF06024_consen   63 IILISLLSFVCILVILYAIYYFVILRERQ   91 (101)
T ss_pred             chHHHHHHHHHHHHHHhhheEEEEEeccc
Confidence            33444444444555555555554444433


No 44 
>PF05393 Hum_adeno_E3A:  Human adenovirus early E3A glycoprotein;  InterPro: IPR008652 This family consists of several early glycoproteins (E3A), from human adenovirus type 2.; GO: 0016021 integral to membrane
Probab=32.66  E-value=73  Score=22.71  Aligned_cols=6  Identities=33%  Similarity=0.816  Sum_probs=4.0

Q ss_pred             CCceec
Q 009821           60 ALPLVG   65 (524)
Q Consensus        60 ~~p~iG   65 (524)
                      .-|+||
T Consensus        66 YrPvI~   71 (94)
T PF05393_consen   66 YRPVIG   71 (94)
T ss_pred             cccccc
Confidence            457777


No 45 
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=29.43  E-value=10  Score=36.22  Aligned_cols=44  Identities=20%  Similarity=0.229  Sum_probs=32.3

Q ss_pred             ChhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEee
Q 009821          368 LPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFIN  413 (524)
Q Consensus       368 lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~  413 (524)
                      -..+.|||.|+.=+.....  +.=+..+|+.++|..||+||.|+..
T Consensus       255 ~n~I~A~V~~~qtv~~G~~--vrlRLle~~~v~~~~ipkgt~l~g~  298 (410)
T TIGR03779       255 RNTIRACVHETQTVVDGSA--VKLRLLEPIQAGDLVIPKGTVLYGT  298 (410)
T ss_pred             CCceEEEEcCceEEecCCE--EEEEEcCceeeCCEEecCCCEEEEE
Confidence            3456799999988774322  2225689999999999999997653


No 46 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=29.31  E-value=86  Score=18.48  Aligned_cols=18  Identities=22%  Similarity=0.447  Sum_probs=12.1

Q ss_pred             HHHHHHh-hCcHHHHHHHH
Q 009821          331 WAMSELL-QKPEVMRKARN  348 (524)
Q Consensus       331 ~~l~~L~-~~pe~~~klr~  348 (524)
                      ..+..++ +|||+++.++.
T Consensus        17 ~lL~~l~~~HPei~~~i~~   35 (38)
T PF14483_consen   17 SLLQSLCERHPEIQQEIRS   35 (38)
T ss_dssp             HHHHHHHHHSTHHHHHHHT
T ss_pred             HHHHHHHHhChhHHHHHHh
Confidence            3344444 79999988764


No 47 
>PHA03049 IMV membrane protein; Provisional
Probab=28.12  E-value=1.6e+02  Score=19.72  Aligned_cols=20  Identities=20%  Similarity=0.391  Sum_probs=10.0

Q ss_pred             HHHHHHHHHHHHHHHHhhcC
Q 009821           27 VSILLAATFAISCYAWFIKK   46 (524)
Q Consensus        27 ~~~~~~~~~~~~~~~~~~~~   46 (524)
                      +++++.+++++++|..+.++
T Consensus         7 l~iICVaIi~lIvYgiYnkk   26 (68)
T PHA03049          7 LVIICVVIIGLIVYGIYNKK   26 (68)
T ss_pred             HHHHHHHHHHHHHHHHHhcc
Confidence            34445555555555554433


No 48 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=28.09  E-value=1.3e+02  Score=23.58  Aligned_cols=42  Identities=14%  Similarity=0.332  Sum_probs=32.1

Q ss_pred             CChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhcc
Q 009821           72 PNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHD  115 (524)
Q Consensus        72 ~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~  115 (524)
                      .+....+.+|.++||.+--.  .+..++...|++.++++.+++.
T Consensus        74 ~~v~~~i~~w~~~~g~v~l~--~~~~~l~~~d~~~l~~l~~~~~  115 (129)
T PF13625_consen   74 QNVEQSIEDWARRYGRVRLY--KGAYLLECDDPELLDELLADPE  115 (129)
T ss_pred             HHHHHHHHHHHHhcCCEEEe--cCeEEEEECCHHHHHHHHhChh
Confidence            35567899999999976432  2466788999999999987654


No 49 
>PF14550 Peptidase_U35_2:  Putative phage protease XkdF
Probab=27.35  E-value=44  Score=25.97  Aligned_cols=22  Identities=27%  Similarity=0.361  Sum_probs=18.2

Q ss_pred             cccCCCccccceeeCCCCEEEe
Q 009821          391 RRPSATSNLSGYTIPKGSTIFI  412 (524)
Q Consensus       391 R~~~~~~~~~g~~ip~G~~v~~  412 (524)
                      -.+.+|.+++|-+||+|+.|+.
T Consensus        71 ~I~~~d~~~~g~~i~~GtWv~~   92 (122)
T PF14550_consen   71 YIAPEDMEIGGETIPKGTWVVG   92 (122)
T ss_pred             EecCCCcccCCeeecceEEEEE
Confidence            3556789999999999999854


No 50 
>PF12273 RCR:  Chitin synthesis regulation, resistance to Congo red;  InterPro: IPR020999  RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 []. 
Probab=24.85  E-value=1.1e+02  Score=24.00  Aligned_cols=9  Identities=11%  Similarity=0.235  Sum_probs=3.9

Q ss_pred             HHHHhhcCC
Q 009821           39 CYAWFIKKP   47 (524)
Q Consensus        39 ~~~~~~~~~   47 (524)
                      +....++++
T Consensus        21 ~~~rRR~r~   29 (130)
T PF12273_consen   21 CHNRRRRRR   29 (130)
T ss_pred             HHHHHHhhc
Confidence            333444454


No 51 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=24.06  E-value=2.8e+02  Score=19.93  Aligned_cols=48  Identities=13%  Similarity=0.126  Sum_probs=38.7

Q ss_pred             HHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhc
Q 009821          307 DQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVA  355 (524)
Q Consensus       307 ~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~  355 (524)
                      +....... ..++-=+..++....-.+.+-++||+..+++.+.+..-+.
T Consensus        32 ~~~~~~~~-~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL~   79 (87)
T PF14129_consen   32 DDNMIAYY-QYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERLE   79 (87)
T ss_pred             HHHHHHHH-HHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence            33334444 6778889999999999999999999999999999977654


No 52 
>PF05084 GRA6:  Granule antigen protein (GRA6);  InterPro: IPR008119  Toxoplasma gondii is an obligate intracellular apicomplexan protozoan parasite, with a complex lifestyle involving varied hosts []. It has two phases of growth: an intestinal phase in feline hosts, and an extra-intestinal phase in other mammals. Oocysts from infected cats develop into tachyzoites, and eventually, bradyzoites and zoitocysts in the extraintestinal host []. Transmission of the parasite occurs through contact with infected cats or raw/undercooked meat; in immunocompromised individuals, it can cause severe and often lethal toxoplasmosis. Acute infection in healthy humans can sometimes also cause tissue damage [].  The protozoan utilises a variety of secretory and antigenic proteins to invade a host and gain access to the intracellular environment []. These originate from distinct organelles in the T. gondii cell termed micronemes, rhoptries, and dense granules. They are released at specific times during invasion to ensure the proteins are allocated to their correct target destinations []. Dense granule antigens (GRAs) are released from the T. gondii tachyzoite while still encapsulated in a host vacuole. Gra6, one of these moieties, is associated with the parasitophorous vacuole []. It possesses a hydrophobic central region flanked by two hydrophilic domains, and is present as a single copy gene in the Toxoplasma gondii genome []. Gra6 shares a similar function with Gra2, in that it is rapidly targeted to a network of membranous tubules that connect with the vacuolar membrane []. Indeed, these two proteins, together with Gra4, form a multimeric complex that stabilises the parasite within the vacuole.
Probab=23.94  E-value=1.6e+02  Score=23.70  Aligned_cols=35  Identities=26%  Similarity=0.383  Sum_probs=17.5

Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCCCCCCCCCceecc
Q 009821           32 AATFAISCYAWFIKKPTRSTPPLPPGPRALPLVGN   66 (524)
Q Consensus        32 ~~~~~~~~~~~~~~~~~~~~~~~ppgp~~~p~iG~   66 (524)
                      +++.+..+..++.++..+..++.|.|-.+-|--|+
T Consensus       159 lA~~VA~L~~~F~RR~~rrsppepsgdgG~~~~G~  193 (215)
T PF05084_consen  159 LAVSVAMLTWFFLRRTGRRSPPEPSGDGGGNDAGN  193 (215)
T ss_pred             HHHHHHHHHHHHHHhhccCCCCCCCCCCCCCcccc
Confidence            33344444445555555555445555555555554


No 53 
>PF04798 Baculo_19:  Baculovirus 19 kDa protein conserved region;  InterPro: IPR006883 This entry is represented by Autographa californica nuclear polyhedrosis virus (AcMNPV), Orf96; it is a family of uncharacterised viral proteins.
Probab=23.27  E-value=30  Score=27.55  Aligned_cols=35  Identities=26%  Similarity=0.466  Sum_probs=23.6

Q ss_pred             CCCCccccccCCCcccCCccceeecCCCCCCCCCHHHHHH
Q 009821          430 FQPDRFLEDVKIGDFRGNNFNYLPFGSGRRICPGIPLAEK  469 (524)
Q Consensus       430 F~PeR~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~  469 (524)
                      -.||.|+-....    +.-..|+- |.+.|.||+..+|..
T Consensus        43 I~PenvvlYN~~----G~lYyYle-gss~~~CP~nE~avV   77 (146)
T PF04798_consen   43 IEPENVVLYNTA----GTLYYYLE-GSSSVFCPPNEFAVV   77 (146)
T ss_pred             EcCceEEEEECC----CeEEEEEe-ccccccCCCCceEEE
Confidence            467777754321    12356788 999999998877754


No 54 
>PF14824 Sirohm_synth_M:  Sirohaem biosynthesis protein central; PDB: 1KYQ_B.
Probab=22.44  E-value=1e+02  Score=17.07  Aligned_cols=15  Identities=33%  Similarity=0.663  Sum_probs=11.5

Q ss_pred             CcHHHHHHHHHHHHh
Q 009821          339 KPEVMRKARNELEQV  353 (524)
Q Consensus       339 ~pe~~~klr~Ei~~~  353 (524)
                      .|.+-.++|+||++.
T Consensus        15 sP~la~~iR~~ie~~   29 (30)
T PF14824_consen   15 SPRLARLIRKEIERL   29 (30)
T ss_dssp             -HHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHh
Confidence            577888999998764


No 55 
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=21.66  E-value=3.9e+02  Score=26.54  Aligned_cols=38  Identities=21%  Similarity=0.302  Sum_probs=21.1

Q ss_pred             HHhCCeEEEecCCeeEEE-eCCHHHHHHHHHhccccccCC
Q 009821           83 QIYGPIFKFYLGRKLCIV-IGSPSLAKQVLKEHDVVFANR  121 (524)
Q Consensus        83 ~kyG~i~~~~~g~~~~vv-v~dp~~i~~il~~~~~~~~~~  121 (524)
                      -+||.|++-.+-++.+-| +..++. ++=+.+....|+..
T Consensus       221 Grfg~V~KaqL~~~~VAVKifp~~~-kqs~~~Ek~Iy~lp  259 (534)
T KOG3653|consen  221 GRFGCVWKAQLDNRLVAVKIFPEQE-KQSFQNEKNIYSLP  259 (534)
T ss_pred             CccceeehhhccCceeEEEecCHHH-HHHHHhHHHHHhcc
Confidence            478888877666665555 344443 34444444445443


No 56 
>PF15206 FAM209:  FAM209 family
Probab=21.36  E-value=98  Score=24.34  Aligned_cols=16  Identities=25%  Similarity=0.511  Sum_probs=10.1

Q ss_pred             CCCCCCCCCCCCCcee
Q 009821           49 RSTPPLPPGPRALPLV   64 (524)
Q Consensus        49 ~~~~~~ppgp~~~p~i   64 (524)
                      +.+-..|||..++|+=
T Consensus        62 K~keq~p~glrg~~fr   77 (150)
T PF15206_consen   62 KNKEQSPPGLRGCSFR   77 (150)
T ss_pred             cccccCCCccCcccCC
Confidence            3455668887776653


No 57 
>PF05961 Chordopox_A13L:  Chordopoxvirus A13L protein;  InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=20.90  E-value=2.7e+02  Score=18.86  Aligned_cols=21  Identities=19%  Similarity=0.414  Sum_probs=10.4

Q ss_pred             HHHHHHHHHHHHHHHHHhhcC
Q 009821           26 VVSILLAATFAISCYAWFIKK   46 (524)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~~~~   46 (524)
                      ++++++.+++++++|..+.+.
T Consensus         6 iLi~ICVaii~lIlY~iYnr~   26 (68)
T PF05961_consen    6 ILIIICVAIIGLILYGIYNRK   26 (68)
T ss_pred             HHHHHHHHHHHHHHHHHHhcc
Confidence            334444555555555555433


No 58 
>PF10777 YlaC:  Inner membrane protein YlaC;  InterPro: IPR019713  The extracytoplasmic function (ECF) sigma factors are small regulatory proteins that are quite divergent in sequence relative to most other sigma factors. YlaC, regulated by YlaA, is important in oxidative stress resistance. It contributes to hydrogen peroxide resistance in Bacillus subtilis []. 
Probab=20.41  E-value=45  Score=26.60  Aligned_cols=38  Identities=16%  Similarity=0.441  Sum_probs=29.7

Q ss_pred             HHHHHhhCcHHHHHHHHHHHHhhcCCCcccccccCCCh
Q 009821          332 AMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLP  369 (524)
Q Consensus       332 ~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~~l~~lp  369 (524)
                      ++-.++++|++-+.+.++|++++...+.++..|+=.+-
T Consensus       114 ai~~iL~~p~V~~~~K~~i~~i~~~Kgei~FYDVy~la  151 (155)
T PF10777_consen  114 AIDKILQSPQVPDEIKQGIQRIISTKGEISFYDVYSLA  151 (155)
T ss_pred             HHHHHHcCCCCCHHHHHHHHHHHHhCCceeEEEeEEee
Confidence            34456679999999999999999887887777754443


No 59 
>TIGR00589 ogt O-6-methylguanine DNA methyltransferase. All proteins in this family for which functions are known are involved alkyl-DNA transferases which remove alkyl groups from DNA as part of alkylation DNA repair. Some of the proteins in this family are also transcription regulators and have a distinct transcription regulatory domain. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=20.32  E-value=1.8e+02  Score=20.60  Aligned_cols=61  Identities=20%  Similarity=0.179  Sum_probs=39.8

Q ss_pred             HHHHHHHHHHHHhhcCCCcccccccC---CChhHHHHHHhhhcCCCCCCCcCc--cccCCCcccccee
Q 009821          341 EVMRKARNELEQVVARDSVVEEFHLA---KLPYLEAIVKETLRLHPPAPLLTS--RRPSATSNLSGYT  403 (524)
Q Consensus       341 e~~~klr~Ei~~~~~~~~~~~~~~l~---~lpyl~a~i~E~lRl~p~~~~~~~--R~~~~~~~~~g~~  403 (524)
                      +.|+++.+.+.++ +.+...|+.++.   ..|---..+--+|+-+|.... +|  |++.++-.++||.
T Consensus         2 ~f~~~V~~~l~~I-P~G~v~TYg~iA~~~g~p~~~RaVg~al~~np~~~~-iPcHRVv~s~G~l~~y~   67 (80)
T TIGR00589         2 PFQQRVWQALRTI-PYGETKSYGQLAARIGNPKAVRAVGGANGRNPLAIL-VPCHRVIGKNGSLTGYA   67 (80)
T ss_pred             hHHHHHHHHHhCC-CCCCcCCHHHHHHHhCCCChHHHHHHHHHhCCCCCC-CCCceeECCCCCCCCCC
Confidence            4678888888774 335566776654   344445666677777775433 44  6778888888763


Done!