Query         009821
Match_columns 524
No_of_seqs    197 out of 2265
Neff          11.2
Searched_HMMs 29240
Date          Mon Mar 25 13:44:48 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009821.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009821hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3swz_A Steroid 17-alpha-hydrox 100.0 8.2E-78 2.8E-82  602.0  43.2  458   51-518     6-481 (494)
  2 3tbg_A Cytochrome P450 2D6; mo 100.0 8.6E-78 2.9E-82  600.3  37.9  455   51-517     8-477 (479)
  3 3pm0_A Cypib1, cytochrome P450 100.0 8.7E-78   3E-82  604.5  34.2  460   50-517     6-485 (507)
  4 3e6i_A CYPIIE1, P450-J, cytoch 100.0 1.2E-76   4E-81  591.5  41.2  457   49-518     6-474 (476)
  5 2fdv_A Cytochrome P450 2A6; CY 100.0 2.4E-76 8.2E-81  588.0  38.7  452   53-517    10-474 (476)
  6 2hi4_A Cytochrome P450 1A2; CY 100.0 3.8E-76 1.3E-80  589.2  36.9  458   50-517    13-489 (495)
  7 1r9o_A Cytochrome P450 2C9; mo 100.0 7.8E-76 2.7E-80  584.7  38.6  453   53-517    11-475 (477)
  8 3czh_A Cytochrome P450 2R1; vi 100.0 7.1E-76 2.4E-80  584.7  38.0  455   51-517    10-477 (481)
  9 1po5_A Cytochrome P450 2B4; ox 100.0 1.2E-75   4E-80  583.1  39.0  452   53-517    10-474 (476)
 10 3k9v_A 1,25-dihydroxyvitamin D 100.0 4.8E-76 1.6E-80  588.2  34.0  447   48-515    19-482 (482)
 11 3ld6_A Lanosterol 14-alpha dem 100.0 9.2E-77 3.2E-81  588.5  28.2  444   53-520    11-458 (461)
 12 3nxu_A Cytochrome P450 3A4; al 100.0 9.3E-78 3.2E-82  600.7  20.7  453   53-521    14-480 (485)
 13 3qz1_A Steroid 21-hydroxylase; 100.0 2.7E-76 9.2E-81  591.8  29.1  446   48-519    24-487 (496)
 14 3s79_A Cytochrome P450 19A1; o 100.0 1.5E-74   5E-79  580.2  33.7  442   51-519    43-499 (503)
 15 2ve3_A Putative cytochrome P45 100.0 5.6E-74 1.9E-78  565.1  31.6  436   50-516     9-444 (444)
 16 3n9y_A Cholesterol SIDE-chain  100.0 4.5E-74 1.5E-78  574.3  29.1  455   48-521     4-480 (487)
 17 2cib_A Cytochrome P450 51; hem 100.0 3.8E-73 1.3E-77  561.0  30.8  444   53-517     4-450 (455)
 18 3gw9_A Sterol 14alpha-demethyl 100.0 8.2E-73 2.8E-77  559.8  28.2  441   52-516     2-450 (450)
 19 2ij2_A Cytochrome P450 BM3; mo 100.0 7.7E-72 2.6E-76  553.7  32.8  446   53-521     3-457 (470)
 20 3dbg_A Putative cytochrome P45 100.0 3.5E-72 1.2E-76  556.6  26.1  437   52-516    22-462 (467)
 21 3i3k_A Lanosterol 14-alpha dem 100.0 1.1E-71 3.8E-76  552.6  28.0  439   50-511     8-450 (461)
 22 3mdm_A Cholesterol 24-hydroxyl 100.0 8.9E-71   3E-75  545.6  32.3  427   71-519     9-445 (456)
 23 3dax_A Cytochrome P450 7A1; ch 100.0 2.8E-68 9.5E-73  533.0  28.1  445   50-516    10-486 (491)
 24 3v8d_A Cholesterol 7-alpha-mon 100.0 1.4E-68 4.9E-73  534.4  25.3  444   50-514    10-484 (491)
 25 3b6h_A Prostacyclin synthase;  100.0 4.5E-66 1.5E-70  517.6  29.4  447   50-517    15-491 (498)
 26 2cd8_A Cytochrome P450 monooxy 100.0 8.4E-65 2.9E-69  496.5  30.7  400   52-521    25-434 (436)
 27 3b98_A Prostaglandin I2 syntha 100.0 4.8E-65 1.6E-69  507.4  28.2  435   50-518    15-473 (475)
 28 1izo_A P450bsbeta, cytochrome  100.0 8.4E-64 2.9E-68  488.5  33.0  401   62-517     9-417 (417)
 29 1n97_A CYP175A1; electron tran 100.0 2.5E-64 8.5E-69  486.9  22.3  383   57-515     3-386 (389)
 30 3awm_A Fatty acid alpha-hydrox 100.0 3.2E-62 1.1E-66  477.0  29.7  402   55-515     4-413 (415)
 31 1ued_A P450 OXYC, P450 monooxy 100.0 5.6E-62 1.9E-66  472.7  29.7  382   51-511     8-405 (406)
 32 1jfb_A Nitric-oxide reductase  100.0   5E-61 1.7E-65  466.9  33.1  370   54-489     2-382 (404)
 33 1cpt_A Cytochrome P450-TERP; o 100.0 1.2E-61 4.2E-66  474.0  27.5  401   52-515     5-428 (428)
 34 3a4g_A Vitamin D hydroxylase;  100.0 1.2E-60 4.3E-65  463.2  31.1  379   70-520    18-406 (411)
 35 2zbx_A Cytochrome P450-SU1; be 100.0 1.5E-60 5.1E-65  463.6  31.6  368   52-489     4-384 (412)
 36 2jjn_A Cytochrome P450 113A1;  100.0 5.2E-61 1.8E-65  467.0  28.2  393   46-516    12-407 (411)
 37 2zwu_A Camphor 5-monooxygenase 100.0 7.1E-61 2.4E-65  465.2  27.4  394   48-518     6-413 (415)
 38 3aba_A Cytochrome P450; oxidor 100.0 1.8E-60 6.3E-65  461.5  30.0  376   70-516    17-403 (403)
 39 4fb2_A P450CIN; heme, monooxyg 100.0 1.5E-60 5.2E-65  462.0  28.6  374   69-517    16-395 (398)
 40 1s1f_A Putative cytochrome P45 100.0   7E-60 2.4E-64  457.9  33.0  384   53-512     8-404 (406)
 41 3ejb_B Biotin biosynthesis cyt 100.0 8.3E-60 2.8E-64  458.3  31.2  380   71-518    12-399 (404)
 42 1odo_A Putative cytochrome P45 100.0 6.3E-60 2.2E-64  458.9  29.4  377   69-514    12-407 (408)
 43 3dsk_A Cytochrome P450 74A, ch 100.0 4.6E-61 1.6E-65  480.9  21.0  411   48-489    23-472 (495)
 44 1q5d_A P450 epoxidase; cytochr 100.0 7.6E-60 2.6E-64  459.6  28.6  382   70-518    24-419 (419)
 45 2dkk_A Cytochrome P450; CYP158 100.0 1.2E-59   4E-64  456.0  28.1  373   71-516    26-411 (411)
 46 2z3t_A Cytochrome P450; monoxy 100.0 3.8E-59 1.3E-63  454.9  31.3  379   71-516    19-417 (425)
 47 3abb_A CYP105D6, cytochrome P4 100.0 4.4E-60 1.5E-64  459.9  24.5  375   69-516    21-408 (408)
 48 2xkr_A CYP142, putative cytoch 100.0 4.1E-59 1.4E-63  451.9  31.2  376   71-516    17-395 (398)
 49 3ivy_A Cytochrome P450 CYP125; 100.0 1.4E-59 4.9E-64  459.4  28.1  396   50-518    15-431 (433)
 50 1gwi_A CYP154C1, cytochrome P4 100.0 6.8E-60 2.3E-64  458.4  25.2  378   69-516    14-410 (411)
 51 3buj_A CALO2; heme, iron, meta 100.0   5E-59 1.7E-63  451.2  30.8  373   72-516    13-397 (397)
 52 2y5n_A MYCG, P-450-like protei 100.0 3.9E-59 1.3E-63  453.3  30.1  372   70-511    35-416 (417)
 53 1z8o_A 6-deoxyerythronolide B  100.0 8.7E-59   3E-63  450.3  30.7  371   70-512    12-402 (404)
 54 2uuq_A CYP130, cytochrome P450 100.0 2.1E-59 7.2E-64  455.1  25.6  373   72-516    25-414 (414)
 55 3nc3_A Cytochrome P450 CYPX; c 100.0 2.1E-59 7.2E-64  458.6  25.8  386   71-514    52-440 (441)
 56 3lxh_A Cytochrome P450; heme,  100.0 7.5E-59 2.6E-63  453.2  29.5  378   71-517    37-419 (421)
 57 2z36_A MOXA, cytochrome P450 t 100.0 1.3E-58 4.3E-63  449.5  30.2  351   70-489    20-385 (413)
 58 3tyw_A Putative cytochrome P45 100.0 2.8E-58 9.5E-63  448.6  31.4  352   69-489    26-389 (417)
 59 3oft_A Cytochrome P450, CYP101 100.0 4.7E-59 1.6E-63  451.7  24.3  354   70-494    22-379 (396)
 60 3dan_A Cytochrome P450 74A2; A 100.0 2.7E-59 9.1E-64  465.7  22.7  406   50-493     6-458 (473)
 61 2xbk_A PIMD protein; epoxidati 100.0 4.6E-58 1.6E-62  443.4  30.5  364   70-511    24-403 (404)
 62 2wm5_A CYP124, putative cytoch 100.0 5.1E-58 1.7E-62  448.0  30.0  355   72-488    44-414 (435)
 63 3mgx_A Putative P450 monooxyge 100.0 3.8E-58 1.3E-62  445.6  25.9  370   71-515    36-415 (415)
 64 3r9b_A Cytochrome P450 164A2;  100.0 9.2E-58 3.2E-62  445.9  28.8  380   70-516    27-418 (418)
 65 1n40_A P450 MT2, cytochrome P4 100.0 5.3E-58 1.8E-62  443.2  26.7  370   70-511    14-395 (396)
 66 3oo3_A OXY protein; cytochrome 100.0 1.6E-57 5.4E-62  439.2  29.4  344   71-489    11-361 (384)
 67 3tkt_A Cytochrome P450; aromat 100.0 1.4E-57 4.9E-62  447.2  27.8  360   74-488    47-427 (450)
 68 1lfk_A OXYB, P450 monooxygenas 100.0 5.6E-58 1.9E-62  443.7  21.6  340   78-488    19-375 (398)
 69 3rwl_A Cytochrome P450 alkane  100.0 6.2E-56 2.1E-60  432.0  31.1  376   71-514    37-426 (426)
 70 3b4x_A 367AA long hypothetical 100.0 1.6E-55 5.4E-60  421.1  24.1  350   75-513     2-365 (367)
 71 2wiy_A XPLA-heme, cytochrome P 100.0 6.2E-55 2.1E-59  421.2  28.2  352   72-489    20-374 (394)
 72 1io7_A Cytochrome P450 CYP119; 100.0 2.5E-55 8.4E-60  420.5  23.6  353   75-516     2-368 (368)
 73 2rfb_A Cytochrome P450; heme,  100.0 3.1E-55 1.1E-59  415.6  23.6  320   83-489     2-324 (343)
 74 3p3o_A Cytochrome P450; monoox 100.0 2.1E-55 7.2E-60  427.6  21.7  384   60-514    23-415 (416)
 75 4dnj_A Putative cytochrome P45 100.0 1.7E-52 5.8E-57  406.0  26.9  384   58-514    17-411 (412)
 76 4dxy_A Cytochrome P450, CYP101 100.0 1.4E-47 4.7E-52  370.5  28.8  352   72-489    37-393 (417)
 77 2yjn_B Erycii, DTDP-4-keto-6-d 100.0 5.5E-47 1.9E-51  357.6  -0.3  310   54-489    35-361 (381)
 78 1m46_B IQ4, IQ4 motif from MYO  37.5      28 0.00094   16.7   2.0   12  341-352     8-19  (26)
 79 2diu_A KIAA0430 protein; struc  36.0      51  0.0018   23.3   4.2   61   62-123    12-76  (96)
 80 1s79_A Lupus LA protein; RRM,   31.1 1.4E+02  0.0048   21.1   6.5   59   61-121    13-79  (103)
 81 2krb_A Eukaryotic translation   31.0 1.1E+02  0.0039   20.1   7.7   51   63-113     5-66  (81)
 82 2nlw_A Eukaryotic translation   29.9 1.5E+02   0.005   20.9   8.2   62   59-120    15-88  (105)
 83 3ijw_A Aminoglycoside N3-acety  21.7      42  0.0014   29.1   2.1   23  405-427    64-86  (268)
 84 1iqt_A AUF1, heterogeneous nuc  21.1 1.7E+02  0.0058   18.6   5.1   44   75-118    13-65  (75)

No 1  
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=100.00  E-value=8.2e-78  Score=601.96  Aligned_cols=458  Identities=25%  Similarity=0.402  Sum_probs=372.9

Q ss_pred             CCCCCCCCCCCceecccccCC--CChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCcccchh
Q 009821           51 TPPLPPGPRALPLVGNILSAE--PNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAAAS  128 (524)
Q Consensus        51 ~~~~ppgp~~~p~iG~~~~~~--~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~~  128 (524)
                      ..+.||||+++|++||++.+.  .+.+..+.+|+++||+||++++|+.++|+|+||+++++++.++...|.+++......
T Consensus         6 ~~~~PPgP~~lPliGnl~~l~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~~~~~   85 (494)
T 3swz_A            6 GAKYPKSLLSLPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMATLD   85 (494)
T ss_dssp             ------CCBCCCEEEEESSCTTSSCHHHHHHHTHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCCCCHHHH
T ss_pred             CCCCCCCCCCCCeEcchHHhCCCCchhHHHHHHHHHcCCEEEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCcHHHH
Confidence            455799999999999999884  357889999999999999999999999999999999999999888888887655444


Q ss_pred             hhccCCccc--c-cCCchHHHHHHHHHhhcCc--chhhhcHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHHHHH
Q 009821          129 VLTYGGKSI--G-ASPEWPKLRQVLVRETMSN--TSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVGELMFLTSLDVATRM  203 (524)
Q Consensus       129 ~~~~~~~~~--~-~~~~w~~~R~~~~~~~~~~--~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~dvi~~~  203 (524)
                      .....+.++  . +|+.|+.+|+.+. +.|+.  ..+..+.+.+.+++..+++.+....++++|+...+..+++|+|+.+
T Consensus        86 ~~~~~~~gl~~~~~g~~wr~~Rr~~~-~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~t~dvi~~~  164 (494)
T 3swz_A           86 IASNNRKGIAFADSGAHWQLHRRLAM-ATFALFKDGDQKLEKIICQEISTLCDMLATHNGQSIDISFPVFVAVTNVISLI  164 (494)
T ss_dssp             HHTTTTCSSSSSCSSHHHHHHHHHHH-HHTTTTSSSTTCHHHHHHHHHHHHHHHHHHTTTEEECCHHHHHHHHHHHHHHH
T ss_pred             HhccCCCCeEeCCCCHHHHHHHHHHH-HHHHHhcchHHHHHHHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHHHHH
Confidence            444333333  3 5899999999997 66753  5577789999999999999887656788999999999999999999


Q ss_pred             HhccCCCCCCchHHHHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCC
Q 009821          204 LWGASLRGEDWDAVAIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEG  283 (524)
Q Consensus       204 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~  283 (524)
                      +||.+++..+.  ....+....+.+........+.+++|++.+++. ...+...+..+.+.+++.+.++++++..+   .
T Consensus       165 ~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~p~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~  238 (494)
T 3swz_A          165 CFNTSYKNGDP--ELNVIQNYNEGIIDNLSKDSLVDLVPWLKIFPN-KTLEKLKSHVKIRNDLLNKILENYKEKFR---S  238 (494)
T ss_dssp             HHSCCCCTTCT--HHHHHHHHHHHHHHHHCSSSSCCSSCGGGTSCC-SHHHHHHHHHHHHHHHHHHHHHHHTTTCC---T
T ss_pred             HcCCcCCCCCH--HHHHHHHHHHHHHHhcccchHHHHHHHHHHcCc-HHHHHHHHHHHHHHHHHHHHHHHHHHhhc---c
Confidence            99999876443  223344444444555555566778888876653 33456677777888888888887766543   3


Q ss_pred             CCcccHHHHHHHHhhc----------CCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHh
Q 009821          284 KSSKDFLQTLLELQQQ----------GDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQV  353 (524)
Q Consensus       284 ~~~~d~l~~ll~~~~~----------~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~  353 (524)
                      ....|+++.+++...+          .+..++++++.+++. .+++||+|||+++++|++++|++||++|+|+|+|++++
T Consensus       239 ~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~-~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v  317 (494)
T 3swz_A          239 DSITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIG-DIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQN  317 (494)
T ss_dssp             TCCCSHHHHHHHHHHTSCCC----CCSSGGGCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred             cchhHHHHHHHHHHHhhhcccccccccccccCHHHHHHHHH-HHhhcchhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHh
Confidence            3467999999986532          123588999999988 99999999999999999999999999999999999999


Q ss_pred             hcCCCcccccccCCChhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCC
Q 009821          354 VARDSVVEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPD  433 (524)
Q Consensus       354 ~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~Pe  433 (524)
                      ++.++.++.+++.+||||+|||+|+||++|+++..++|.+.+|++++||.||||+.|.++.+++||||++|+||++||||
T Consensus       318 ~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~Pe  397 (494)
T 3swz_A          318 VGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPE  397 (494)
T ss_dssp             TCSSSCCCGGGGGTCHHHHHHHHHHHHHSCSSTTCSCEECSSSEEETTEEECTTCEEEECHHHHHHCTTTSSSTTSCCGG
T ss_pred             cCCCCCCCHHHHhcCHHHHHHHHHHHHhcCCcccccceecCCCceECCEEeCCCCEEEEehHHhhCCcccCCCcccCCcc
Confidence            99888899999999999999999999999999987899999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCcccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCCCCC-cccccccccccCCCceeee
Q 009821          434 RFLEDVKIGDFRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTKFD-LSDKLLMALKKSEPLVVIP  512 (524)
Q Consensus       434 R~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~  512 (524)
                      ||+++++.. .......|+|||+|+|.|||++||.+|++++++.|+++|+++++++.+.+ .....+.+..+ .+++|++
T Consensus       398 Rfl~~~~~~-~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~p-~~~~v~~  475 (494)
T 3swz_A          398 RFLNPAGTQ-LISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQLPSLEGIPKVVFLI-DSFKVKI  475 (494)
T ss_dssp             GGBCTTSSS-BCCCCSCCCTTCCGGGSCSCHHHHHHHHHHHHHHHHHHEEEECCSSCCCCCCSCEESSSEEC-CCCCEEE
T ss_pred             cccCCCCcc-ccCCCCcccCCCCCCCCCCcHHHHHHHHHHHHHHHHHhcEEeeCCCCCCCCCCCccceeecC-CCcEEEE
Confidence            999754321 12234689999999999999999999999999999999999988764333 33333444444 6799999


Q ss_pred             ecCCCc
Q 009821          513 TPRSLS  518 (524)
Q Consensus       513 ~~r~~~  518 (524)
                      ++|+.-
T Consensus       476 ~~R~~~  481 (494)
T 3swz_A          476 KVRQAW  481 (494)
T ss_dssp             EECHHH
T ss_pred             EEcCcC
Confidence            999653


No 2  
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=100.00  E-value=8.6e-78  Score=600.35  Aligned_cols=455  Identities=23%  Similarity=0.407  Sum_probs=347.2

Q ss_pred             CCCCCCCCCCCceecccccC-CCChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCcccchhh
Q 009821           51 TPPLPPGPRALPLVGNILSA-EPNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAAASV  129 (524)
Q Consensus        51 ~~~~ppgp~~~p~iG~~~~~-~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~~~  129 (524)
                      +.++||||+++|++||++++ ..+.+..+.+|+++||+||++++|+.++|+|+||+++++|+.+++..|+.++.......
T Consensus         8 ~~kLPPGP~~lP~iGn~~~~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~i~~vl~~~~~~f~~r~~~~~~~~   87 (479)
T 3tbg_A            8 KGKLPPGPLPLPGLGNLLHVDFQNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQI   87 (479)
T ss_dssp             -CCCCCCSCCBTTTBTGGGCCTTSHHHHHHHHHHHHCSEEEEEETTEEEEEEEHHHHHHHHHTTTGGGSCBCCCCGGGGG
T ss_pred             CCCCCCCCCCcCcccchHhhcCCCHHHHHHHHHHHhCCEEEEEECCeeEEEECCHHHHHHHHHhCChhhcCCCchHHHHH
Confidence            34689999999999999988 46788999999999999999999999999999999999999988878887776554433


Q ss_pred             hccC--Ccc--cc-cCCchHHHHHHHHHhhcCcchhhh--cHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHHHH
Q 009821          130 LTYG--GKS--IG-ASPEWPKLRQVLVRETMSNTSLNS--SSAIRRQAVLRSMKDVSGRVGSPIKVGELMFLTSLDVATR  202 (524)
Q Consensus       130 ~~~~--~~~--~~-~~~~w~~~R~~~~~~~~~~~~l~~--~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~dvi~~  202 (524)
                      ...+  +.+  +. +|+.|+.+|+.+. +.|+...+..  +...+......+...+....+..+|+.+.+..+++|+++.
T Consensus        88 ~~~~~~~~~~~~~~~g~~w~~~R~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (479)
T 3tbg_A           88 LGFGPRSQGVFLARYGPAWREQRRFSV-STLRNLGLGKKSLEQWVTEEAACLCAAFANHSGRPFRPNGLLDKAVSNVIAS  166 (479)
T ss_dssp             GTCBTTBCCSTTCCSSHHHHHHHHHHH-HHHHHTTSTTCHHHHHHHHHHHHHHHHHHTTTTCCBCTHHHHHHHHHHHHHH
T ss_pred             hccCCCCCceeeCCCCHHHHHHHHHHH-HHhcchhhhHHHHHHHHHHHHHHHHHHHHhccCCcccHHHHHHHHHHHHHHH
Confidence            3222  122  22 6899999999987 6665555543  4555666666666666555678899999999999999999


Q ss_pred             HHhccCCCCCCchHHHHHHHHHHHHHHHHhcCC--CcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCC
Q 009821          203 MLWGASLRGEDWDAVAIQFREVLEEMFQVLGSG--NISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDM  280 (524)
Q Consensus       203 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~  280 (524)
                      ++||..+...+..  ...+.+............  .....+|+...+  ....++.....+...+.+.+.++.+.+..+ 
T Consensus       167 ~~fg~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  241 (479)
T 3tbg_A          167 LTCGRRFEYDDPR--FLRLLDLAQEGLKEESGFLREVLNAVPVLLHI--PALAGKVLRFQKAFLTQLDELLTEHRMTWD-  241 (479)
T ss_dssp             HHHSCCCCTTCHH--HHHHHHHHHHHHHTTSSHHHHHHHHSGGGGGS--HHHHHHHTHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred             hhcCCcccccchh--hhhhhhhhhhhhhhhhhhhhhhhcccchhccc--hhhHHHHHHHHHHHHHHHHHHHHHHHHhhh-
Confidence            9999999876542  222333332222211110  011112222221  122233334444455555555544433322 


Q ss_pred             CCCCCcccHHHHHHHH----hhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcC
Q 009821          281 NEGKSSKDFLQTLLEL----QQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVAR  356 (524)
Q Consensus       281 ~~~~~~~d~l~~ll~~----~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~  356 (524)
                       ......|+++.++..    ..+.+..++++++.+++. .+++||+|||+++++|++++|++||++|+|||+|++.+++.
T Consensus       242 -~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~-~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~~~~~  319 (479)
T 3tbg_A          242 -PAQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVA-DLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQ  319 (479)
T ss_dssp             -TTSCCCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCS
T ss_pred             -cccccchhhhhhhhhhhhcccCCccchhhHHHHHHHH-HHHHhhhhhhHHHHHHHHHHhccCHHHHHHHHHHHHHHHhh
Confidence             122344555555433    223445689999999998 99999999999999999999999999999999999999988


Q ss_pred             CCcccccccCCChhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccc
Q 009821          357 DSVVEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFL  436 (524)
Q Consensus       357 ~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~  436 (524)
                      ++.++.+++.+||||+|||+||||++|++++..+|.+.+|++++||.||||+.|.++.+++||||++|+||++|+||||+
T Consensus       320 ~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~~~~~~d~~~~g~~IP~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl  399 (479)
T 3tbg_A          320 VRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFL  399 (479)
T ss_dssp             SSCCCHHHHTTCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCGGGGB
T ss_pred             ccccchhhhccccccccceeeeccccccccccceeecCCCceECCEEecCCCeeeechhhhcCChhhCCCccccCccccC
Confidence            88999999999999999999999999999997777888999999999999999999999999999999999999999999


Q ss_pred             cccCCCcccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCCCCC-cccccccccccCCCceeeeecC
Q 009821          437 EDVKIGDFRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTKFD-LSDKLLMALKKSEPLVVIPTPR  515 (524)
Q Consensus       437 ~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~r  515 (524)
                      ++++.   ..++..|+|||+|+|.|||++||.+|+++++|.|+++||+++++|.+.+ .....+.+..| .+++|+++||
T Consensus       400 ~~~~~---~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~P-~~~~v~~~pR  475 (479)
T 3tbg_A          400 DAQGH---FVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQPRPSHHGVFAFLVSP-SPYELCAVPR  475 (479)
T ss_dssp             CTTCC---BCCCTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEECCTTSCCCCSCEEESSSEEE-CCCCBEEEEC
T ss_pred             CCCcc---cCCCCceecCCCCCcCChhHHHHHHHHHHHHHHHHHccEEEeCCCCCCccccccceeeecC-CCeEEEEEEC
Confidence            76432   2345789999999999999999999999999999999999998885443 33344566665 5899999999


Q ss_pred             CC
Q 009821          516 SL  517 (524)
Q Consensus       516 ~~  517 (524)
                      ++
T Consensus       476 s~  477 (479)
T 3tbg_A          476 HH  477 (479)
T ss_dssp             --
T ss_pred             CC
Confidence            86


No 3  
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=100.00  E-value=8.7e-78  Score=604.51  Aligned_cols=460  Identities=22%  Similarity=0.360  Sum_probs=355.6

Q ss_pred             CCCCCCCCCCCCceecccccCCCChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCcccchhh
Q 009821           50 STPPLPPGPRALPLVGNILSAEPNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAAASV  129 (524)
Q Consensus        50 ~~~~~ppgp~~~p~iG~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~~~  129 (524)
                      .+.+.||||+++|++||++.++.+++..+.+++++||+||++++|+.++++|+||+++++|+.++...|.+++.......
T Consensus         6 ~~~~~pPgP~~~P~iG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~~   85 (507)
T 3pm0_A            6 SSKGKPPGPFAWPLIGNAAAVGQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPSFASFRV   85 (507)
T ss_dssp             ----------------------CCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTSCBCCCCHHHHH
T ss_pred             CCCCCCcCCCCCCeeCchhhcCccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCcchHHHh
Confidence            45567999999999999999988999999999999999999999999999999999999999877777877765443332


Q ss_pred             hcc-CCcccc-cCCchHHHHHHHHHhhcCcchh------hhcHHHHHHHHHHHHHHHhcc--CCCceehhHHHHHHHHHH
Q 009821          130 LTY-GGKSIG-ASPEWPKLRQVLVRETMSNTSL------NSSSAIRRQAVLRSMKDVSGR--VGSPIKVGELMFLTSLDV  199 (524)
Q Consensus       130 ~~~-~~~~~~-~~~~w~~~R~~~~~~~~~~~~l------~~~~~~~~~~~~~l~~~l~~~--~~~~vd~~~~~~~~~~dv  199 (524)
                      ... .+..+. +|+.|+++|+.+. +.|+....      +.+.+.+.++++++++.+...  .+.++|+.+++..+++|+
T Consensus        86 ~~~g~~l~~~~~g~~w~~~R~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dv  164 (507)
T 3pm0_A           86 VSGGRSMAFGHYSEHWKVQRRAAH-SMMRNFFTRQPRSRQVLEGHVLSEARELVALLVRGSADGAFLDPRPLTVVAVANV  164 (507)
T ss_dssp             GGGGTCSSSSCSSHHHHHHHHHHH-HHHHHSTTSSTTHHHHHHHHHHHHHHHHHHHHHHTTGGGCCBCCHHHHHHHHHHH
T ss_pred             hcCCCceEECCCChHHHHHHHHHH-HHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHhhcccCCCcChHHHHHHHHHHH
Confidence            222 222223 6899999999986 55543333      338899999999999988764  467899999999999999


Q ss_pred             HHHHHhccCCCCCCchHHHHHHHHHHHHHHHHhcCCCcccccccccccCcc--chHHHHHHHHHHHHHHHHHhhccccCC
Q 009821          200 ATRMLWGASLRGEDWDAVAIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQ--GLESKAKKLTVRLDKIFESLLRPGQSG  277 (524)
Q Consensus       200 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~--~~~~~~~~~~~~l~~~~~~~i~~~~~~  277 (524)
                      ++.++||.+++..+.  ....+...+...............+|++.+++..  ...+...+..+.+.+++.+.++++++.
T Consensus       165 i~~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  242 (507)
T 3pm0_A          165 MSAVCFGCRYSHDDP--EFRELLSHNEEFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNFILDKFLRHCES  242 (507)
T ss_dssp             HHHHHTSCCCCTTCH--HHHHHTSCHHHHHHHHSTTCCTTTCGGGGGSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHccccCCCCCH--HHHHHHHHHHHHHHhcccchHHHHhHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            999999999876542  3344555555555555555566678887766422  135667777888888888888877654


Q ss_pred             CCCCCCCCcccHHHHHHHHhhc--C------CCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHH
Q 009821          278 QDMNEGKSSKDFLQTLLELQQQ--G------DYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNE  349 (524)
Q Consensus       278 ~~~~~~~~~~d~l~~ll~~~~~--~------~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~E  349 (524)
                      .+.  +....|+++.+++..+.  .      +..++++++.+++. .+++||+|||+++++|++++|++||++|+|||+|
T Consensus       243 ~~~--~~~~~d~l~~ll~~~~~~~~~~~~~~~~~l~~~~i~~~~~-~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~E  319 (507)
T 3pm0_A          243 LRP--GAAPRDMMDAFILSAEKKAAGDSHGGGARLDLENVPATIT-DIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAE  319 (507)
T ss_dssp             CCT--TCCCCSHHHHHHHHHHHHHSCC----CCCCCGGGHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred             ccc--ccCCccHHHHHHHHhhhhccccccCCCCCCCHHHHHHHHH-HHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            321  23467999999965432  1      12489999999998 9999999999999999999999999999999999


Q ss_pred             HHHhhcCCCcccccccCCChhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCC
Q 009821          350 LEQVVARDSVVEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQD  429 (524)
Q Consensus       350 i~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~  429 (524)
                      ++++++.++.++.+++.+||||+|||+||||++|+++..++|.+.+|++++||.||||+.|.++.+++||||++|+||++
T Consensus       320 i~~~~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~  399 (507)
T 3pm0_A          320 LDQVVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPEN  399 (507)
T ss_dssp             HHHHTCTTSCCCGGGGGGCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEETTEEECTTCEEEEBSHHHHSCTTTCSSSSS
T ss_pred             HHHhcCCCCCCChhhcccChHHHHHHHHHHhcCCCcccCCCccccCCceEcCEEECCCCEEEeChHHHhCCcccCCCcCc
Confidence            99999887889999999999999999999999999998788999999999999999999999999999999999999999


Q ss_pred             CCCCccccccCCCcccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCCCCCcccccccccccCCCce
Q 009821          430 FQPDRFLEDVKIGDFRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTKFDLSDKLLMALKKSEPLV  509 (524)
Q Consensus       430 F~PeR~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  509 (524)
                      |+||||+++++.. ....+..|+|||+|+|.|||++||.+|++++++.|+++||+++.++.+++.....+.+..+ .+++
T Consensus       400 F~PeRfl~~~~~~-~~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~p-~~~~  477 (507)
T 3pm0_A          400 FDPARFLDKDGLI-NKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEPAKMNFSYGLTIKP-KSFK  477 (507)
T ss_dssp             CCGGGGBCTTSCB-CHHHHTTCCSSCCSTTCCSCHHHHHHHHHHHHHHHHHHEEEEECTTCCSCCCEEESSSEEE-CSCC
T ss_pred             cCCCcccCCCCcc-cCCCcccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHeEEecCCCCCCCCCCCCCccccC-CCcE
Confidence            9999999754321 1112358999999999999999999999999999999999999877655554444556555 4589


Q ss_pred             eeeecCCC
Q 009821          510 VIPTPRSL  517 (524)
Q Consensus       510 v~~~~r~~  517 (524)
                      |++++|+.
T Consensus       478 v~~~~R~~  485 (507)
T 3pm0_A          478 VNVTLRES  485 (507)
T ss_dssp             EEEEESSC
T ss_pred             EEEEEccc
Confidence            99999975


No 4  
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=100.00  E-value=1.2e-76  Score=591.51  Aligned_cols=457  Identities=22%  Similarity=0.382  Sum_probs=364.3

Q ss_pred             CCCCCCCCCCCCCceecccccC-CCChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCcccch
Q 009821           49 RSTPPLPPGPRALPLVGNILSA-EPNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAAA  127 (524)
Q Consensus        49 ~~~~~~ppgp~~~p~iG~~~~~-~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~  127 (524)
                      +++.+.||||+++|++||++.+ ..+++..+.+|+++||+||++++|+.++++|+||+.+++|+.++...|.+++.....
T Consensus         6 ~~~~~lpPgP~~~PliG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~~~~v~~il~~~~~~f~~r~~~~~~   85 (476)
T 3e6i_A            6 SSKGKLPPGPFPLPIIGNLFQLELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLPAF   85 (476)
T ss_dssp             ----CCCCCCCCBTTTBTGGGCCTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTSTTTTCEECCCGGG
T ss_pred             cCCCCCCcCCCCcccccChhhhccccHhHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcchHhhCCCCCCchh
Confidence            4456789999999999999998 578899999999999999999999999999999999999999887677776554433


Q ss_pred             hhhccCCcccccCCchHHHHHHHHHhhcCcchh--hhcHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHHHHHHh
Q 009821          128 SVLTYGGKSIGASPEWPKLRQVLVRETMSNTSL--NSSSAIRRQAVLRSMKDVSGRVGSPIKVGELMFLTSLDVATRMLW  205 (524)
Q Consensus       128 ~~~~~~~~~~~~~~~w~~~R~~~~~~~~~~~~l--~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~dvi~~~~f  205 (524)
                      .....++....+|+.|+++|+... ..++...+  ..+.+.+.++++.+++.+.+..++++|+.+++..+++|+|++++|
T Consensus        86 ~~~~~~~l~~~~g~~w~~~Rr~~~-~~l~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~dvi~~~~f  164 (476)
T 3e6i_A           86 HAHRDRGIIFNNGPTWKDIRRFSL-TTLRNYGMGKQGNESRIQREAHFLLEALRKTQGQPFDPTFLIGCAPCNVIADILF  164 (476)
T ss_dssp             GGGTTSSSTTCCSTTHHHHHHHHH-HHHHHTC-CCSHHHHHHHHHHHHHHHHHHTTTTSCBCTHHHHTHHHHHHHHHHHH
T ss_pred             heecCCCEEecCCcHHHHHHHHHH-HHHHhcCCCchHHHHHHHHHHHHHHHHHHHhCCCCcChHHHHHHHHHHHHHHHHc
Confidence            333223333339999999999775 55544333  346788999999999998765677899999999999999999999


Q ss_pred             ccCCCCCCchHHHHHHHHHHHHHHHHhcCC--Ccccccc-cccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCC
Q 009821          206 GASLRGEDWDAVAIQFREVLEEMFQVLGSG--NISDLFP-LLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNE  282 (524)
Q Consensus       206 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~  282 (524)
                      |.+++..+.  ....+...+.+.+......  .....+| ++.+++  ...+...+..+.+.+++.+.++++++..+   
T Consensus       165 G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~lp--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---  237 (476)
T 3e6i_A          165 RKHFDYNDE--KFLRLMYLFNENFHLLSTPWLQLYNNFPSFLHYLP--GSHRKVIKNVAEVKEYVSERVKEHHQSLD---  237 (476)
T ss_dssp             SCCCCTTCH--HHHHHHHHHHHHHHHTTSHHHHHHHHSHHHHTTSC--SHHHHHHHHHHHHHHHHHHHHHHHHHTCC---
T ss_pred             CCCCCCCCH--HHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcC--cHHHHHHHHHHHHHHHHHHHHHHHhhcCC---
Confidence            999876543  2334444444444332211  1223345 344432  23456677788888889888888776543   


Q ss_pred             CCCcccHHHHHHHHhhcC----CCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCC
Q 009821          283 GKSSKDFLQTLLELQQQG----DYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDS  358 (524)
Q Consensus       283 ~~~~~d~l~~ll~~~~~~----~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~  358 (524)
                      .....|+++.++....++    +..++++++.++++ .+++||+|||+++++|++++|++||++|+|+|+|++++++.++
T Consensus       238 ~~~~~d~~~~ll~~~~~~~~~~~~~l~~~~i~~~~~-~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~  316 (476)
T 3e6i_A          238 PNCPRDLTDCLLVEMEKEKHSAERLYTMDGITVTVA-DLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSR  316 (476)
T ss_dssp             TTSCCSHHHHHHHHHHSSSSCSSCSCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTTTTS
T ss_pred             CCCCccHHHHHHHHHHhcccCCCCCcCHHHHHHHHH-HHHhcchHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhcCCCC
Confidence            223568999998765432    24589999999998 9999999999999999999999999999999999999998778


Q ss_pred             cccccccCCChhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccc
Q 009821          359 VVEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLED  438 (524)
Q Consensus       359 ~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~  438 (524)
                      .++++++.+||||+|||+|+||++|+++..++|.+.+|++++||.||||+.|.++.+++||||++|+||++||||||+++
T Consensus       317 ~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeR~l~~  396 (476)
T 3e6i_A          317 IPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNE  396 (476)
T ss_dssp             CCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEECSHHHHTCTTTSSSTTSCCGGGGBCT
T ss_pred             CCChhhccCCchHHHHHHHHHHhccCCCccccccCCCCeeEcCEEeCCCCEEEechHHhhCCcccCCCccccCchhhcCC
Confidence            88999999999999999999999999997788999999999999999999999999999999999999999999999975


Q ss_pred             cCCCcccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCC-CCCCcccc-cccccccCCCceeeeecCC
Q 009821          439 VKIGDFRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEG-TKFDLSDK-LLMALKKSEPLVVIPTPRS  516 (524)
Q Consensus       439 ~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~-~~~~~~~~-~~~~~~~~~~~~v~~~~r~  516 (524)
                      ++.   ...+..|+|||+|+|.|||++||.+|++++++.|+++|+++++.+ ..++.... .+.+..+ .+++|++++|+
T Consensus       397 ~~~---~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~R~  472 (476)
T 3e6i_A          397 NGK---FKYSDYFKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPLVDPKDIDLSPIHIGFGCIP-PRYKLCVIPRS  472 (476)
T ss_dssp             TSS---BCCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCTTTCCCSCSEESSSEEC-CCCCEEEEECC
T ss_pred             CCC---ccCccceecCCCCCccCccHHHHHHHHHHHHHHHHHhcEeecCCCCCCCCCCcccCccccCC-CCeEEEEEecc
Confidence            432   123568999999999999999999999999999999999997533 34444443 3444444 67999999998


Q ss_pred             Cc
Q 009821          517 LS  518 (524)
Q Consensus       517 ~~  518 (524)
                      +.
T Consensus       473 ~~  474 (476)
T 3e6i_A          473 HH  474 (476)
T ss_dssp             --
T ss_pred             cc
Confidence            63


No 5  
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=100.00  E-value=2.4e-76  Score=587.99  Aligned_cols=452  Identities=22%  Similarity=0.390  Sum_probs=362.5

Q ss_pred             CCCCCCCCCceecccccC-CCChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCcccchhhh-
Q 009821           53 PLPPGPRALPLVGNILSA-EPNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAAASVL-  130 (524)
Q Consensus        53 ~~ppgp~~~p~iG~~~~~-~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~~~~-  130 (524)
                      ..||||+++|++||++.+ ..+++..+.+++++||+||++++|+.++++++||+.+++|+.++...|.+++........ 
T Consensus        10 ~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~~~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~~~~   89 (476)
T 2fdv_A           10 KLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWVF   89 (476)
T ss_dssp             BCCCCCCCBTTTBTGGGCCTTBHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCCHHHHHHH
T ss_pred             CCCCCCCCCcccccHhhcCCcchHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcChHhhCCCCCcHHHhhhc
Confidence            568999999999999988 577899999999999999999999999999999999999997665557665433222211 


Q ss_pred             ccCCcccccCCchHHHHHHHHHhhcCcchh--hhcHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHHHHHHhccC
Q 009821          131 TYGGKSIGASPEWPKLRQVLVRETMSNTSL--NSSSAIRRQAVLRSMKDVSGRVGSPIKVGELMFLTSLDVATRMLWGAS  208 (524)
Q Consensus       131 ~~~~~~~~~~~~w~~~R~~~~~~~~~~~~l--~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~  208 (524)
                      ...+....+|+.|+++|+.+. +.|+...+  +.+.+.+.++++++++.+....++++|+.+++..+++|+|++++||.+
T Consensus        90 ~~~~l~~~~g~~~~~~Rr~~~-~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~  168 (476)
T 2fdv_A           90 KGYGVVFSNGERAKQLRRFSI-ATLRDFGVGKRGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDR  168 (476)
T ss_dssp             TTCSSSSCCHHHHHHHHHHHH-HHHHHTTTTSHHHHHHHHHHHHHHHHHHHHTTTCCBCCHHHHHHHHHHHHHHHHHSSC
T ss_pred             CCCCeEecCchHHHHHHHHHH-HHHHHhCCChhhHHHHHHHHHHHHHHHHHhcCCCccChHHHHHHHHHHHHHHHHcCCc
Confidence            212222238899999999987 77877666  678999999999999998765567899999999999999999999999


Q ss_pred             CCCCCchHHHHHHHHHHHHHHHHhcCC--Cccccccc-ccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCC
Q 009821          209 LRGEDWDAVAIQFREVLEEMFQVLGSG--NISDLFPL-LTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKS  285 (524)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~-l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~  285 (524)
                      ++..+.  ....+...+...+......  .+...+|+ +++++  ...++..+..+.+.+++.+.++++++..+   ...
T Consensus       169 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~--~~~~~~~~~~~~~~~~~~~~i~~r~~~~~---~~~  241 (476)
T 2fdv_A          169 FDYKDK--EFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLP--GPQQQAFQLLQGLEDFIAKKVEHNQRTLD---PNS  241 (476)
T ss_dssp             CCTTCH--HHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHTTSC--SHHHHHHHHHHHHHHHHHHHHHHHHTTCC---TTS
T ss_pred             CCCCCH--HHHHHHHHHHHHHHhhcccccchhhhhhhHHHhcC--cHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCC
Confidence            875432  2334444444444322210  12234565 33332  23456677788888999999988776432   233


Q ss_pred             cccHHHHHHHHhhc----CCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCccc
Q 009821          286 SKDFLQTLLELQQQ----GDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVE  361 (524)
Q Consensus       286 ~~d~l~~ll~~~~~----~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~  361 (524)
                      ..|+++.+++...+    .+..++++++.++++ .+++||+|||+++++|++++|++||++|+|||+|++++++.++.++
T Consensus       242 ~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~-~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~  320 (476)
T 2fdv_A          242 PRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTL-NLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPK  320 (476)
T ss_dssp             CCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSCCC
T ss_pred             CccHHHHHHHHHHhcccCccccccHHHHHHHHH-HHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhcCCCCCC
Confidence            57999999986532    234689999999999 9999999999999999999999999999999999999998777789


Q ss_pred             ccccCCChhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCC
Q 009821          362 EFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKI  441 (524)
Q Consensus       362 ~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~  441 (524)
                      .+++.+||||+|||+|+||++|+++..++|.+.+|++++||.||+|+.|.++.+++||||++|+||++||||||++.++.
T Consensus       321 ~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dp~~F~PeR~l~~~~~  400 (476)
T 2fdv_A          321 FEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQ  400 (476)
T ss_dssp             GGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTTSCCGGGGBCTTSC
T ss_pred             hhhhhcChHHHHHHHHHHHhcCCcccCcceeccCCeeECCEeeCCCCEEEeehHHhhCChhhcCCccccCchhhCCCCCC
Confidence            99999999999999999999999996689999999999999999999999999999999999999999999999965322


Q ss_pred             CcccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCCC-CCccc-ccccccccCCCceeeeecCCC
Q 009821          442 GDFRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTK-FDLSD-KLLMALKKSEPLVVIPTPRSL  517 (524)
Q Consensus       442 ~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~-~~~~~-~~~~~~~~~~~~~v~~~~r~~  517 (524)
                         ...+..|+|||+|+|.|+|++||.+|++++++.|+++|++++.++.+ .+... ..+.+..+ .+++|++++|+.
T Consensus       401 ---~~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p-~~~~v~~~~R~~  474 (476)
T 2fdv_A          401 ---FKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATIP-RNYTMSFLPRHH  474 (476)
T ss_dssp             ---BCCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCCSCSEESSSEEC-CCCCEEEEEC--
T ss_pred             ---CCCCcCcccCCCCCCCCCChHHHHHHHHHHHHHHHhhcEEEcCCCCCCCCccccccceeecC-CceEEEEEeccc
Confidence               11346899999999999999999999999999999999999887642 22323 34555555 679999999974


No 6  
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=100.00  E-value=3.8e-76  Score=589.19  Aligned_cols=458  Identities=24%  Similarity=0.384  Sum_probs=363.7

Q ss_pred             CCCCCCCCCCCCceecccccCCCChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCcccchhh
Q 009821           50 STPPLPPGPRALPLVGNILSAEPNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAAASV  129 (524)
Q Consensus        50 ~~~~~ppgp~~~p~iG~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~~~  129 (524)
                      ++.+.+|||+++|++|+++.+..+++..+.+++++||+||++++|+.++++++||+.+++++.++...|.+++.......
T Consensus        13 ~~lp~~PgP~~~p~~G~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~i~~il~~~~~~f~~r~~~~~~~~   92 (495)
T 2hi4_A           13 KGLKSPPEPWGWPLLGHVLTLGKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLYTSTL   92 (495)
T ss_dssp             TTCBCCCCCCCBTTTBTHHHHTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTGGGSCBCCCCHHHHT
T ss_pred             CCCCCCCCCCCCcceeeHHhcCccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhcchhhCCCCCcHHHHH
Confidence            34455699999999999988877889999999999999999999999999999999999999887666776654332222


Q ss_pred             hc-cCCcccc--cCCchHHHHHHHHHhhc---Ccchh---h---hcHHHHHHHHHHHHHHHhc--cCCCceehhHHHHHH
Q 009821          130 LT-YGGKSIG--ASPEWPKLRQVLVRETM---SNTSL---N---SSSAIRRQAVLRSMKDVSG--RVGSPIKVGELMFLT  195 (524)
Q Consensus       130 ~~-~~~~~~~--~~~~w~~~R~~~~~~~~---~~~~l---~---~~~~~~~~~~~~l~~~l~~--~~~~~vd~~~~~~~~  195 (524)
                      .. ..+....  +|+.|+++|+.+. +.|   +....   +   .+.+.+.++++++++.+.+  .+++++|+.+.+..+
T Consensus        93 ~~~~~~l~~~~~~g~~w~~~Rr~~~-~~f~~~s~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~d~~~~~~~~  171 (495)
T 2hi4_A           93 ITDGQSLTFSTDSGPVWAARRRLAQ-NALNTFSIASDPASSSSCYLEEHVSKEAKALISRLQELMAGPGHFDPYNQVVVS  171 (495)
T ss_dssp             STTSCCTTTSSCCSHHHHHHHHHHH-HHHHHTTTSBCSSCSSCBHHHHHHHHHHHHHHHHHHHHHHTTSCBCHHHHHHHH
T ss_pred             hcCCCCEEEcCCCChHHHHHHHHHH-HHHHHhccCcccccchhhhHHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHH
Confidence            21 1222333  5899999999987 554   33332   2   6889999999999999876  356789999999999


Q ss_pred             HHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhcccc
Q 009821          196 SLDVATRMLWGASLRGEDWDAVAIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQ  275 (524)
Q Consensus       196 ~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~  275 (524)
                      ++|+|++++||.+++..+.  ....+.+....+............+|++++++. ...++..+..+.+.+++.+.+++++
T Consensus       172 ~~dvi~~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~-~~~~~~~~~~~~~~~~~~~~i~~r~  248 (495)
T 2hi4_A          172 VANVIGAMCFGQHFPESSD--EMLSLVKNTHEFVETASSGNPLDFFPILRYLPN-PALQRFKAFNQRFLWFLQKTVQEHY  248 (495)
T ss_dssp             HHHHHHHHHHGGGSCTTCH--HHHHHHTTTHHHHTTSSTTCGGGTCGGGGGSCC-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCCCCCH--HHHHHHHHHHHHHHhcccchHHHHhHHHHhcCc-hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999998874332  223344444444433333334556787765532 2345667778888899999998877


Q ss_pred             CCCCCCCCCCcccHHHHHHHHhhc----CCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHH
Q 009821          276 SGQDMNEGKSSKDFLQTLLELQQQ----GDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELE  351 (524)
Q Consensus       276 ~~~~~~~~~~~~d~l~~ll~~~~~----~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~  351 (524)
                      +..+   .....|+++.+++...+    ++..++++++.+++. .+++||+|||+++++|++++|++||++|+|+|+|++
T Consensus       249 ~~~~---~~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~-~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~  324 (495)
T 2hi4_A          249 QDFD---KNSVRDITGALFKHSKKGPRASGNLIPQEKIVNLVN-DIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELD  324 (495)
T ss_dssp             HTCC---TTCCCSHHHHHHHHHHHCCEETTEECCTHHHHTHHH-HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred             Hhhc---ccccccHHHHHHHHhhhccCccccCCCHHHHHHHHH-HHHHhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHH
Confidence            6532   22347999999965322    223588999999998 999999999999999999999999999999999999


Q ss_pred             HhhcCCCcccccccCCChhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCC
Q 009821          352 QVVARDSVVEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQ  431 (524)
Q Consensus       352 ~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~  431 (524)
                      ++++.++.++.+++.+|||++|||+|+||++|++++.++|.+.+|++++||.||+|+.|.++.+++||||++|+||++||
T Consensus       325 ~v~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~  404 (495)
T 2hi4_A          325 TVIGRERRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFR  404 (495)
T ss_dssp             HHTTTSSCCCGGGSTTCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEETTEEECTTCEEEEBHHHHHHCTTTCSSTTSCC
T ss_pred             HhcCCCCCCChHHhccCHHHHHHHHHHHHccCCccCCCccccCCCeeEeCeEECCCCEEEeChHHhhCCcccCCCcCccC
Confidence            99987778899999999999999999999999999767899999999999999999999999999999999999999999


Q ss_pred             CCccccccCCCcccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCCCCCcccccccccccCCCc-ee
Q 009821          432 PDRFLEDVKIGDFRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTKFDLSDKLLMALKKSEPL-VV  510 (524)
Q Consensus       432 PeR~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~v  510 (524)
                      ||||++.++.......+..|+|||+|+|.|+|++||.+|++++++.|+++|++++.++.+.+.....+.+..+ .++ +|
T Consensus       405 PeRfl~~~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~p-~~~~~v  483 (495)
T 2hi4_A          405 PERFLTADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVKVDLTPIYGLTMKH-ARCEHV  483 (495)
T ss_dssp             GGGGBCTTSSSBCHHHHTTCCCSCCGGGCCTTHHHHHHHHHHHHHHHHHHCEEECCTTCCCCCCCBCSSSCBC-CCCCCB
T ss_pred             cccccCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEeCCCCCCCCccccCCceecC-CCcceE
Confidence            9999964321000113467999999999999999999999999999999999998876544444444555555 456 88


Q ss_pred             eeecCCC
Q 009821          511 IPTPRSL  517 (524)
Q Consensus       511 ~~~~r~~  517 (524)
                      +++ |.+
T Consensus       484 ~~~-R~~  489 (495)
T 2hi4_A          484 QAR-RFS  489 (495)
T ss_dssp             EEE-CCC
T ss_pred             EEE-Ecc
Confidence            888 854


No 7  
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=100.00  E-value=7.8e-76  Score=584.73  Aligned_cols=453  Identities=23%  Similarity=0.349  Sum_probs=351.3

Q ss_pred             CCCCCCCCCceecccccC-CCChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCcccchhhh-
Q 009821           53 PLPPGPRALPLVGNILSA-EPNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAAASVL-  130 (524)
Q Consensus        53 ~~ppgp~~~p~iG~~~~~-~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~~~~-  130 (524)
                      ..||||+++|++||++.+ ..+++..+.+++++||+||++++|+.+.++++||+.+++|+.++...|.+++........ 
T Consensus        11 ~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~il~~~~~~f~~~~~~~~~~~~~   90 (477)
T 1r9o_A           11 KLPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLAERAN   90 (477)
T ss_dssp             BCCCCSSSCC-----CCBCHHHHHHHHHHHHHHHCSEEEEESSSCEEEEECSHHHHHHHHTTTTTTTCEECCCSCCCTTT
T ss_pred             CCCCCCCCCceeccHhhcCCCChHHHHHHHHHHhCCEEEEEECCCcEEEECCHHHHHHHHhcccHhhCCCCcchhhhhcc
Confidence            578999999999999887 456788999999999999999999989999999999999997665556665432211111 


Q ss_pred             ccCCcccccCCchHHHHHHHHHhhcCcc--hhhhcHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHHHHHHhccC
Q 009821          131 TYGGKSIGASPEWPKLRQVLVRETMSNT--SLNSSSAIRRQAVLRSMKDVSGRVGSPIKVGELMFLTSLDVATRMLWGAS  208 (524)
Q Consensus       131 ~~~~~~~~~~~~w~~~R~~~~~~~~~~~--~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~  208 (524)
                      ...+....+|+.|+++|+.+. +.|+..  .++.+.+.+.++++++++.+.+..++++|+.+++..+++|+|++++||.+
T Consensus        91 ~~~~l~~~~g~~w~~~Rr~~~-~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~  169 (477)
T 1r9o_A           91 RGFGIVFSNGKKWKEIRRFSL-MTLRNFGMGKRSIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFHKR  169 (477)
T ss_dssp             CTTSSTTCCHHHHHHHHHHHH-HHHTTSSSCSSCHHHHHHHHHHHHHHHHHTTTTSCBCTHHHHHHHHHHHHHHHHHSCC
T ss_pred             CCCceEecCChHHHHHHHHHH-HHHHHhCCChHHHHHHHHHHHHHHHHHHHhcCCCccChHHHHHHHHHHHHHHHHccCc
Confidence            112222238899999999886 677766  45678999999999999999765567899999999999999999999998


Q ss_pred             CCCCCchHHHHHHHHHHHHHHHHhcC--CCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCc
Q 009821          209 LRGEDWDAVAIQFREVLEEMFQVLGS--GNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSS  286 (524)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~  286 (524)
                      ++..+.  ....+...+...+.....  ......+|++.++.. ...++..+..+.+.+++.+.++++++..+   ....
T Consensus       170 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~lp-~~~~~~~~~~~~~~~~~~~~i~~r~~~~~---~~~~  243 (477)
T 1r9o_A          170 FDYKDQ--QFLNLMEKLNENIKILSSPWIQICNNFSPIIDYFP-GTHNKLLKNVAFMKSYILEKVKEHQESMD---MNNP  243 (477)
T ss_dssp             CCTTCH--HHHHHHHHHHHHHHHHTCCBC-------CCCSCCT-TCHHHHHHHHHHHHHHHHHHHHHHHHTCC---TTCC
T ss_pred             CCCCCH--HHHHHHHHHHHHHHhhccchhHHHhhccHHHHhcc-hHHHHHHHHHHHHHHHHHHHHHHHHhccC---CCCc
Confidence            875432  233444444444432221  122335565222211 22355666777888889998888775432   2234


Q ss_pred             ccHHHHHHHHhhc----CCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcccc
Q 009821          287 KDFLQTLLELQQQ----GDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEE  362 (524)
Q Consensus       287 ~d~l~~ll~~~~~----~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~  362 (524)
                      .|+++.++....+    .+..++++++.+++. .+++||+|||+++++|++++|++||++|+|||+|++++++.++.++.
T Consensus       244 ~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~-~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~  322 (477)
T 1r9o_A          244 QDFIDCFLMKMEKEKHNQPSEFTIESLENTAV-DLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCM  322 (477)
T ss_dssp             CSHHHHHHHHHHHHTTSCSCSCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSCCCG
T ss_pred             hHHHHHHHHHHHhhhccCCCCCCHHHHHHHHH-HHhhcccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCCCCCCCh
Confidence            6999999864321    134689999999999 99999999999999999999999999999999999999987778899


Q ss_pred             cccCCChhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCC
Q 009821          363 FHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIG  442 (524)
Q Consensus       363 ~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~  442 (524)
                      +++.+||||+|||+|+||++|+++..++|.+.+|++++||.||+|+.|.++.+++||||++|+||++||||||++.++. 
T Consensus       323 ~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dP~~F~PeR~l~~~~~-  401 (477)
T 1r9o_A          323 QDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGN-  401 (477)
T ss_dssp             GGGGGCHHHHHHHHHHHHHHTSSTTCSCEECSSCEEETTEEECTTCEEEECSHHHHTCTTTSSSTTSCCGGGGBCTTSC-
T ss_pred             HhhccCcHHHHHHHHHHHhcCCCCCCCceeccCCccccceecCCCCEEEEecHHhhCCcccCCCccccCccceECCCCC-
Confidence            9999999999999999999999997689999999999999999999999999999999999999999999999965322 


Q ss_pred             cccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCCCC-Cccc-ccccccccCCCceeeeecCCC
Q 009821          443 DFRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTKF-DLSD-KLLMALKKSEPLVVIPTPRSL  517 (524)
Q Consensus       443 ~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~-~~~~-~~~~~~~~~~~~~v~~~~r~~  517 (524)
                        ...+..|+|||+|+|.|||++||.+|+++++++|+++|++++.++.+. +... ..+.+..+ .+++|++++|+.
T Consensus       402 --~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~R~~  475 (477)
T 1r9o_A          402 --FKKSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDPKNLDTTPVVNGFASVP-PFYQLCFIPIHH  475 (477)
T ss_dssp             --BCCCTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCCCCBCCSSSCBC-CCCCEEEEECCC
T ss_pred             --cCccccccCCCCccCCCCCHHHHHHHHHHHHHHHHHhcEEecCCCCCCCCccCCcCceeecC-CCeEEEEEEecc
Confidence              113458999999999999999999999999999999999998876422 2222 34555555 679999999974


No 8  
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=100.00  E-value=7.1e-76  Score=584.71  Aligned_cols=455  Identities=23%  Similarity=0.382  Sum_probs=363.2

Q ss_pred             CCCCCCCCCCCceecccccCCCC---hhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCcccch
Q 009821           51 TPPLPPGPRALPLVGNILSAEPN---LHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAAA  127 (524)
Q Consensus        51 ~~~~ppgp~~~p~iG~~~~~~~~---~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~  127 (524)
                      +.+.||||+++|++|+++.+..+   ++..+.+++++||+||++++|+.++++|+||+.+++++.++...|++++.....
T Consensus        10 ~~~lpPgP~~~p~~G~~~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~vl~~~~~~f~~~~~~~~~   89 (481)
T 3czh_A           10 PMGFPPGPPGLPFIGNIYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLF   89 (481)
T ss_dssp             --CCCCCCCCBTTTBHHHHHHHCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEEESHHHHHHHHTTTTTTTCBCCCCHHH
T ss_pred             CCCCCCCCCCCcccccHhhcCcccCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhhchHhhCCCCCcHHH
Confidence            44679999999999999876333   789999999999999999999999999999999999998876667766543222


Q ss_pred             hhhccC-Cccc-ccCCchHHHHHHHHHhhcCcchh--hhcHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHHHHH
Q 009821          128 SVLTYG-GKSI-GASPEWPKLRQVLVRETMSNTSL--NSSSAIRRQAVLRSMKDVSGRVGSPIKVGELMFLTSLDVATRM  203 (524)
Q Consensus       128 ~~~~~~-~~~~-~~~~~w~~~R~~~~~~~~~~~~l--~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~dvi~~~  203 (524)
                      .....+ +..+ .+|+.|+++|+.+. +.|+...+  ..+.+.+.++++++++.+....++++|+.+.+..+++|+|+++
T Consensus        90 ~~~~~~~~~~~~~~g~~w~~~R~~~~-~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~vi~~~  168 (481)
T 3czh_A           90 MKMTKMGGLLNSRYGRGWVDHRRLAV-NSFRYFGYGQKSFESKILEETKFFNDAIETYKGRPFDFKQLITNAVSNITNLI  168 (481)
T ss_dssp             HHHHTTCSSTTCCSSHHHHHHHHHHH-HHHHHTTTTSTTHHHHHHHHHHHHHHHHHTTTTCCBCCHHHHHHHHHHHHHHH
T ss_pred             HhhcCCCCeEeCCCChHHHHHHHHHH-HHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHHHHHHH
Confidence            222211 2122 27899999999997 77765443  5788999999999999997655678999999999999999999


Q ss_pred             HhccCCCCCCchHHHHHHHHHHHHHHHHhcCCC--cccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCC
Q 009821          204 LWGASLRGEDWDAVAIQFREVLEEMFQVLGSGN--ISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMN  281 (524)
Q Consensus       204 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~  281 (524)
                      +||.+++..+.  ....+.+.+...+.......  ....+|++.+++. ...++..+..+.+.+++.+.++++++..+  
T Consensus       169 ~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~-~~~~~~~~~~~~~~~~~~~~i~~r~~~~~--  243 (481)
T 3czh_A          169 IFGERFTYEDT--DFQHMIELFSENVELAASASVFLYNAFPWIGILPF-GKHQQLFRNAAVVYDFLSRLIEKASVNRK--  243 (481)
T ss_dssp             HHSSCCCTTCH--HHHHHHHHHHHHHHHTTSHHHHHHHHCGGGGGCSS-SHHHHHHHHHHHHHHHHHHHHHHHHTTCC--
T ss_pred             HcCCCCCCCCH--HHHHHHHHHHHHHhhhccchhHHhhhhHHHHhCCc-hHHHHHHHHHHHHHHHHHHHHHHHHHhcC--
Confidence            99998864332  23444444555444322111  3345676654431 23456677788888999999988776532  


Q ss_pred             CCCCcccHHHHHHHHhhc----CCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCC
Q 009821          282 EGKSSKDFLQTLLELQQQ----GDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARD  357 (524)
Q Consensus       282 ~~~~~~d~l~~ll~~~~~----~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~  357 (524)
                       .....|+++.+++...+    .+..++++++.+++. .+++||+|||+++++|++++|++||++|+|||+|++++++.+
T Consensus       244 -~~~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~-~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~  321 (481)
T 3czh_A          244 -PQLPQHFVDAYLDEMDQGKNDPSSTFSKENLIFSVG-ELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPN  321 (481)
T ss_dssp             -TTCCSSHHHHHHHHHHHTTTCTTCCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSS
T ss_pred             -CCchHHHHHHHHHHHHhcccCccccccHHHHHHHHH-HHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHHHHhcCCC
Confidence             23457999999976532    134689999999999 999999999999999999999999999999999999999877


Q ss_pred             CcccccccCCChhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCcccc
Q 009821          358 SVVEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLE  437 (524)
Q Consensus       358 ~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~  437 (524)
                      +.++.+++.+|||++|||+|+||++|+++..++|.+.+|++++||.||+|+.|.++.+++||||++|+||++||||||++
T Consensus       322 ~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~l~  401 (481)
T 3czh_A          322 GKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLD  401 (481)
T ss_dssp             SCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTCSSTTSCCGGGGBC
T ss_pred             CCCChhhhhhChHHHHHHHHHHhhccccccCcceeecCCeEEeCEEcCCCCEEEechHHHhCCcccCCCccccCCCceeC
Confidence            88999999999999999999999999999767899999999999999999999999999999999999999999999996


Q ss_pred             ccCCCcccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCCCCCcccccccccccCCCceeeeecCCC
Q 009821          438 DVKIGDFRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTKFDLSDKLLMALKKSEPLVVIPTPRSL  517 (524)
Q Consensus       438 ~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~  517 (524)
                      +++.   ...+..|+|||+|+|.|+|++||.+|++++++.|+++|++++.++.+.+.....+.+..+ .++.++++||.-
T Consensus       402 ~~~~---~~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~  477 (481)
T 3czh_A          402 SSGY---FAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPHELVPDLKPRLGMTLQP-QPYLICAERRHH  477 (481)
T ss_dssp             TTSC---BCCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECGGGCCCCCCCCSSSSCCC-CCCCBEEEECC-
T ss_pred             CCCC---CcCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHheEEeCCCCCCCCcccCCCceecC-CceEEEEEeccc
Confidence            4321   124568999999999999999999999999999999999998765433333333444444 678899999864


No 9  
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=100.00  E-value=1.2e-75  Score=583.05  Aligned_cols=452  Identities=21%  Similarity=0.377  Sum_probs=356.8

Q ss_pred             CCCCCCCCCceecccccC-CCChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCcccchhhh-
Q 009821           53 PLPPGPRALPLVGNILSA-EPNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAAASVL-  130 (524)
Q Consensus        53 ~~ppgp~~~p~iG~~~~~-~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~~~~-  130 (524)
                      ..||||+++|++||++.+ ..+++..+.+++++||++|++++|+.++++++||+.+++|+.++...|.+++........ 
T Consensus        10 ~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~~~~   89 (476)
T 1po5_A           10 KLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIF   89 (476)
T ss_dssp             CCCCCSCCBTTTBTGGGCCTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCGGGGCSCC
T ss_pred             CCCcCCCCCCccccHHhccCCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCCcHHHHhhc
Confidence            578999999999999988 678899999999999999999999999999999999999997665557665432222111 


Q ss_pred             ccCCcccccCCchHHHHHHHHHhhcCcc--hhhhcHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHHHHHHhccC
Q 009821          131 TYGGKSIGASPEWPKLRQVLVRETMSNT--SLNSSSAIRRQAVLRSMKDVSGRVGSPIKVGELMFLTSLDVATRMLWGAS  208 (524)
Q Consensus       131 ~~~~~~~~~~~~w~~~R~~~~~~~~~~~--~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~  208 (524)
                      ...+....+|+.|+++|+.+. +.|+..  ..+.+.+.+.++++++++.+.+..++++|+.+++..+++|+|++++||.+
T Consensus        90 ~~~~l~~~~g~~w~~~Rr~~~-~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~  168 (476)
T 1po5_A           90 QGYGVIFANGERWRALRRFSL-ATMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKR  168 (476)
T ss_dssp             SSCCCCCSSHHHHHHHHHHHH-HHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTTTCCBCCHHHHHHHHHHHHHHHHHSSC
T ss_pred             CCCceEecCCcHHHHHHHHHH-HHHHHhCCChhHHHHHHHHHHHHHHHHHHhcCCCccCHHHHHHHHHHHHHHHHHcCCC
Confidence            112222238899999999886 677666  45678999999999999998765567899999999999999999999998


Q ss_pred             CCCCCchHHHHHHHHHHHHHHHHhcCC--Cccccccc-ccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCC
Q 009821          209 LRGEDWDAVAIQFREVLEEMFQVLGSG--NISDLFPL-LTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKS  285 (524)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~-l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~  285 (524)
                      ++..+.  ....+.+.+...+......  .....+|+ +++++  ...++..+..+.+.+++.+.++++++..+   ...
T Consensus       169 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~lp--~~~~~~~~~~~~~~~~~~~~i~~r~~~~~---~~~  241 (476)
T 1po5_A          169 FDYKDP--VFLRLLDLFFQSFSLISSFSSQVFELFSGFLKHFP--GTHRQIYRNLQEINTFIGQSVEKHRATLD---PSN  241 (476)
T ss_dssp             CCTTCH--HHHHHHHHHHHHTTTCCTTHHHHHHHTHHHHHTSS--CSHHHHHHHHHHHHHHHHHHHHHHHTTCC---TTS
T ss_pred             CCCCCH--HHHHHHHHHHHHHhhhcchhhHHHHhhhHHHHhcC--cHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCC
Confidence            874432  2222332222222110100  11224554 33322  22355667777888899999988876432   223


Q ss_pred             cccHHHHHHHHhhc----CCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCccc
Q 009821          286 SKDFLQTLLELQQQ----GDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVE  361 (524)
Q Consensus       286 ~~d~l~~ll~~~~~----~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~  361 (524)
                      ..|+++.++....+    .+..++++++.+++. .+++||+|||+++++|++++|++||++|+|||+|++++++.++.++
T Consensus       242 ~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~-~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~  320 (476)
T 1po5_A          242 PRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVL-SLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPA  320 (476)
T ss_dssp             CCSHHHHHHHHHHHHTCCTTCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSCCC
T ss_pred             cccHHHHHHHHHHhhccCCCCCCCHHHHHHHHH-HHHhhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCC
Confidence            46999999865322    123578999999998 9999999999999999999999999999999999999998777889


Q ss_pred             ccccCCChhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCC
Q 009821          362 EFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKI  441 (524)
Q Consensus       362 ~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~  441 (524)
                      .+++.+||||+|||+|+||++|++++.++|.+.+|++++||.||||+.|.++.+++||||++|+||++||||||+++++.
T Consensus       321 ~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rdp~~~~dp~~F~PeR~l~~~~~  400 (476)
T 1po5_A          321 LDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGA  400 (476)
T ss_dssp             GGGGGGCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTTSCCGGGGBCTTSC
T ss_pred             hHHHhcCcHHHHHHHHHHHhccCCCCCCccccCCCceecCEecCCCCEEEeehHhHhcCccccCCccccCchhhCCCCCC
Confidence            99999999999999999999999997689999999999999999999999999999999999999999999999965322


Q ss_pred             CcccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCCC-CCccc-ccccccccCCCceeeeecCCC
Q 009821          442 GDFRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTK-FDLSD-KLLMALKKSEPLVVIPTPRSL  517 (524)
Q Consensus       442 ~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~-~~~~~-~~~~~~~~~~~~~v~~~~r~~  517 (524)
                         ...+..|+|||+|+|.|+|++||.+|++++++.|+++|++++.++.+ .+... ..+.+..+ .+++|++++|+.
T Consensus       401 ---~~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p-~~~~v~~~~R~~  474 (476)
T 1po5_A          401 ---LKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDLTPRESGVGNVP-PSYQIRFLARHH  474 (476)
T ss_dssp             ---BCCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECSSCGGGCCCCCCSTTSSCCC-CCCCBEEEECC-
T ss_pred             ---ccCCccccCCCCccccCcchHHHHHHHHHHHHHHHhceEEeCCCCCCCCCccCCcCceeecC-cceEEEEEecCC
Confidence               11345899999999999999999999999999999999999887642 22222 34555555 689999999975


No 10 
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=100.00  E-value=4.8e-76  Score=588.20  Aligned_cols=447  Identities=21%  Similarity=0.354  Sum_probs=359.6

Q ss_pred             CCCCCCCCCCCCCCceecccccC-----CCChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCC
Q 009821           48 TRSTPPLPPGPRALPLVGNILSA-----EPNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRD  122 (524)
Q Consensus        48 ~~~~~~~ppgp~~~p~iG~~~~~-----~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~  122 (524)
                      ..++.+.+|||+++|++||++.+     ..+++..+.+++++||+||++++|+.++|+++||+.+++|+.++. .|.+++
T Consensus        19 ~~~pl~~~PGP~~~p~iG~~~~~~~~~~~~~~~~~~~~l~~~YG~i~~~~~g~~~~vvv~dp~~~~~il~~~~-~~~~r~   97 (482)
T 3k9v_A           19 ETRNVTDLPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEALYRTES-AHPQRL   97 (482)
T ss_dssp             CCEEGGGCCCSCCCTTTBTHHHHHHTTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTCC-SSCCCC
T ss_pred             ccCCCCCCCCCCCCCccccHHHHhccCCcccHHHHHHHHHHHcCCEEEEccCCCCEEEEcCHHHHHHHHHhcC-CCCCCC
Confidence            45677789999999999998776     246788999999999999999999999999999999999998854 576665


Q ss_pred             cccch---hhhccCCcccc--cCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhcc---CCCceehhHHHHH
Q 009821          123 PSAAA---SVLTYGGKSIG--ASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGR---VGSPIKVGELMFL  194 (524)
Q Consensus       123 ~~~~~---~~~~~~~~~~~--~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~---~~~~vd~~~~~~~  194 (524)
                      .....   ......+.++.  +|+.|+++||.+...+++...++.+.+.+.++++.+++.+.+.   .++++|+.+++..
T Consensus        98 ~~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~f~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~g~~vd~~~~~~~  177 (482)
T 3k9v_A           98 EIKPWKAYRDHRNEAYGLMILEGQEWQRVRSAFQKKLMKPVEIMKLDKKINEVLADFLERMDELCDERGRIPDLYSELNK  177 (482)
T ss_dssp             CCHHHHHHHHHHTCCCCTTTCCHHHHHHHHHHHHHHHTCHHHHGGGHHHHHHHHHHHHHHHHHHCCTTSCCTTHHHHHHH
T ss_pred             CchHHHHHHHhcCCCCCceeCCCchHHHHHHHhhHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHH
Confidence            43211   11111222333  8899999999998445588889999999999999999998764   4668999999999


Q ss_pred             HHHHHHHHHHhccCCCCCCch--HHHHHHHHHHHHHHHHhcCCCcccccc--cccccCccchHHHHHHHHHHHHHHHHHh
Q 009821          195 TSLDVATRMLWGASLRGEDWD--AVAIQFREVLEEMFQVLGSGNISDLFP--LLTRFDLQGLESKAKKLTVRLDKIFESL  270 (524)
Q Consensus       195 ~~~dvi~~~~fG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p--~l~~~~~~~~~~~~~~~~~~l~~~~~~~  270 (524)
                      +++|+|+.++||.+++..+.+  .....+.+.+..++.....   ...+|  +..++. ....+...+..+.+.+++.+.
T Consensus       178 ~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~  253 (482)
T 3k9v_A          178 WSFESICLVLYEKRFGLLQKETEEEALTFITAIKTMMSTFGK---MMVTPVELHKRLN-TKVWQAHTLAWDTIFKSVKPC  253 (482)
T ss_dssp             HHHHHHHHHHHSCCCCSSSTTSTTSSHHHHHHHHHHHTTGGG---GSSSCHHHHHHHT-CHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcccccCCCCCCcchHHHHHHHHHHHHHHHHHH---HHhhhHHHHHhcC-CHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999998644321  1224555555555443221   11222  122221 223344555666677777777


Q ss_pred             hccccCCCCCCCCCCcccHHHHHHHHhhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHH
Q 009821          271 LRPGQSGQDMNEGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNEL  350 (524)
Q Consensus       271 i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei  350 (524)
                      +++++++..   .....|++..+++.     ..++++++.+++. .+++||+|||+++++|++++|++||++|+|+++|+
T Consensus       254 i~~r~~~~~---~~~~~d~l~~ll~~-----~~l~~~ei~~~~~-~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei  324 (482)
T 3k9v_A          254 IDNRLQRYS---QQPGADFLCDIYQQ-----DHLSKKELYAAVT-ELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEV  324 (482)
T ss_dssp             HHHHHHHTT---TCTTSCHHHHHHHH-----TCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred             HHHHHHHhc---cCCchHHHHHHHhc-----cCCCHHHHHHHHH-HHHHhhhhhHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence            777664332   22346788888864     3588999999998 99999999999999999999999999999999999


Q ss_pred             HHhhcCCCcccccccCCChhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCC
Q 009821          351 EQVVARDSVVEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDF  430 (524)
Q Consensus       351 ~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F  430 (524)
                      +++++.++.++.+++.+||||+|||+|+||++|++++ ++|.+.+|++++||.||||+.|.++.+++||||++|+||++|
T Consensus       325 ~~v~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~-~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F  403 (482)
T 3k9v_A          325 QSVLPDNQTPRAEDLRNMPYLKACLKESMRLTPSVPF-TTRTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFEDSHKF  403 (482)
T ss_dssp             HHHSCTTCCCCGGGGGGCHHHHHHHHHHHHHSCSCCE-EEEECSSCEEETTEEECTTCEEEEECSGGGGCTTTCSSTTSC
T ss_pred             HHHhCCCCCCCHHHHhhCHHHHHHHHHHhhcCCCCcC-cccccCCceeeCCEEECCCCEEEEccccccCCCccCCCcCcc
Confidence            9999987889999999999999999999999999998 689999999999999999999999999999999999999999


Q ss_pred             CCCccccccCCCcccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCCCCCcccccccccccCCCcee
Q 009821          431 QPDRFLEDVKIGDFRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTKFDLSDKLLMALKKSEPLVV  510 (524)
Q Consensus       431 ~PeR~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v  510 (524)
                      |||||++++.    ...+..|+|||+|+|.|+|++||++|+++++++|+++|++++.++.+++.  ....+..++.+++|
T Consensus       404 ~PeRfl~~~~----~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~--~~~~~~~p~~~~~~  477 (482)
T 3k9v_A          404 RPERWLQKEK----KINPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYDIVATDNEPVEM--LHLGILVPSRELPI  477 (482)
T ss_dssp             CGGGGTCTTS----CCCGGGCCTTCCSTTSCSCHHHHHHHHHHHHHHHHHHEEEEESCCCCCCE--EESSSEEESSSCCE
T ss_pred             CccccCCCCC----CCCCccccCCCCCCcCCccHHHHHHHHHHHHHHHHHhcEEeccCCCCccc--ccceeecCCCCcce
Confidence            9999997543    13457899999999999999999999999999999999999887755444  33566677888999


Q ss_pred             eeecC
Q 009821          511 IPTPR  515 (524)
Q Consensus       511 ~~~~r  515 (524)
                      ++++|
T Consensus       478 ~~~~R  482 (482)
T 3k9v_A          478 AFRPR  482 (482)
T ss_dssp             EEEEC
T ss_pred             EEeeC
Confidence            99887


No 11 
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=100.00  E-value=9.2e-77  Score=588.50  Aligned_cols=444  Identities=20%  Similarity=0.326  Sum_probs=356.7

Q ss_pred             CCCCCCCC-CceecccccCCCChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCcccch-hhh
Q 009821           53 PLPPGPRA-LPLVGNILSAEPNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAAA-SVL  130 (524)
Q Consensus        53 ~~ppgp~~-~p~iG~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~-~~~  130 (524)
                      +.||+|++ +|+|||++.++.+++.++.++++|||+||++++|+.++|+|+||+.+++++.++...+..++..... ...
T Consensus        11 ~~PP~~~~~lP~iG~~~~~~~~~~~~~~~~~~kYG~i~~~~~~~~~~vvv~~~~~i~~il~~~~~~~~~~~~~~~~~~~~   90 (461)
T 3ld6_A           11 KSPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLTTPV   90 (461)
T ss_dssp             CCCCBCCCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHHHHHH
T ss_pred             CCCCCCCCCcCeeeeHHHhhhCHHHHHHHHHHHhCCEEEEEECCccEEEEeCHHHHHHHHhCCccccCCCcchhhhhhcc
Confidence            45777764 9999999999889999999999999999999999999999999999999999887767666543222 112


Q ss_pred             ccCCcccc-cCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHHHHHHhccCC
Q 009821          131 TYGGKSIG-ASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVGELMFLTSLDVATRMLWGASL  209 (524)
Q Consensus       131 ~~~~~~~~-~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~  209 (524)
                      .+.+..+. +|+.|+++|+.+. +.|+...++.+.+.+.+.+.++++.+.+  +..+|+.+.+..+++++++.++||.++
T Consensus        91 ~g~~~~~~~~~~~~~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~fG~~~  167 (461)
T 3ld6_A           91 FGKGVAYDVPNPVFLEQKKMLK-SGLNIAHFKQHVSIIEKETKEYFESWGE--SGEKNVFEALSELIILTASHCLHGKEI  167 (461)
T ss_dssp             HCTTSGGGSCHHHHHHHHHHHH-HHSSHHHHHHHHHHHHHHHHHHGGGGCS--EEEEEHHHHHHHHHHHHHHHHHTCHHH
T ss_pred             CCCccccCCCcHHHHHHHHhcc-ccccHHHHhhhhHHHHHHHHHHHHHHhh--cCCccHHHHHHHHHHHHHHHHHcCcch
Confidence            22222222 7889999999986 8999999999999999999998888754  567899999999999999999999887


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcccH
Q 009821          210 RGEDWDAVAIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSSKDF  289 (524)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~  289 (524)
                      .....+    .+......+...+.  .....+|.+  + .....++..++.+.+.+++.+.+++++.+     .+...|+
T Consensus       168 ~~~~~~----~~~~~~~~~~~~~~--~~~~~~~~~--~-~~~~~~~~~~~~~~l~~~~~~~i~~r~~~-----~~~~~d~  233 (461)
T 3ld6_A          168 RSQLNE----KVAQLYADLDGGFS--HAAWLLPGW--L-PLPSFRRRDRAHREIKDIFYKAIQKRRQS-----QEKIDDI  233 (461)
T ss_dssp             HHTCCH----HHHHHHHHHHTTSS--HHHHHSCTT--S-CCHHHHHHHHHHHHHHHHHHHHHHHHTTC-----CCCCCSH
T ss_pred             hhhhhh----hhhhhhhhhhhhhh--hHHHhhhhh--c-cCcHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCCCcch
Confidence            654432    22222222211110  111112221  1 12234556677788889999988887654     3345799


Q ss_pred             HHHHHHHhhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCC-CcccccccCCC
Q 009821          290 LQTLLELQQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARD-SVVEEFHLAKL  368 (524)
Q Consensus       290 l~~ll~~~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~-~~~~~~~l~~l  368 (524)
                      ++.++++..+++..++++++.+++. .+++||+|||+++++|++++|++||++|+|+|+|++++++.+ ...+.+++++|
T Consensus       234 l~~ll~~~~~~~~~ls~~ei~~~~~-~~~~aG~dTt~~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~l~~l  312 (461)
T 3ld6_A          234 LQTLLDATYKDGRPLTDDEVAGMLI-GLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDL  312 (461)
T ss_dssp             HHHHHTCBCTTSCBCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCTTCCCCCHHHHHTC
T ss_pred             hhhhHHhhhcccCCCCHHHHHHHHH-hhhhcccccccccchhhhcccccChHHHHHHHHHHHHHhcccccchhHHHHHHH
Confidence            9999998777667899999999998 999999999999999999999999999999999999999864 45688899999


Q ss_pred             hhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCcccCCc
Q 009821          369 PYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGDFRGNN  448 (524)
Q Consensus       369 pyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~~~~~  448 (524)
                      |||+|||+|+||++|+++. ..|.+.+|++++||.||||+.|.++.+++||||++|+||++||||||+++++.   ...+
T Consensus       313 pyl~avi~E~lRl~p~~~~-~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~---~~~~  388 (461)
T 3ld6_A          313 NLLDRCIKETLRLRPPIMI-MMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNPA---SGEK  388 (461)
T ss_dssp             HHHHHHHHHHHHHSCSCCC-EEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCGGGGGSCCHH---HHSS
T ss_pred             hhhhheeeeccccCCchhc-cccccccceeeCCcccCCCCeeeechHhhcCCccccCCccccCccccCCCCcc---cCCC
Confidence            9999999999999999998 57999999999999999999999999999999999999999999999976432   2235


Q ss_pred             cceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCCCCCcccccccccccCCCceeeeecCCCccc
Q 009821          449 FNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTKFDLSDKLLMALKKSEPLVVIPTPRSLSAL  520 (524)
Q Consensus       449 ~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~~~~  520 (524)
                      ..|+|||+|+|.|||++||.+|++++++.|+++||+++++|..... .....+. .+.++.|++++|++-.-
T Consensus       389 ~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~l~~~~~~~~-~~~~~~~-~p~~~~v~~~~Rss~~~  458 (461)
T 3ld6_A          389 FAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFPTV-NYTTMIH-TPENPVIRYKRRSTHHH  458 (461)
T ss_dssp             SSSCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTCCCCB-CCSSSSC-CBSSCEEEEEECC----
T ss_pred             CccccCCCcCcCChhHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcc-cccceEE-cCCceEEEEEECCCCCc
Confidence            6799999999999999999999999999999999999998743332 2233443 34578899999998643


No 12 
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=100.00  E-value=9.3e-78  Score=600.67  Aligned_cols=453  Identities=26%  Similarity=0.398  Sum_probs=351.2

Q ss_pred             CCCCCCCCCceecccccCCCChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhc-cccccCCCcccchhhhc
Q 009821           53 PLPPGPRALPLVGNILSAEPNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEH-DVVFANRDPSAAASVLT  131 (524)
Q Consensus        53 ~~ppgp~~~p~iG~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~-~~~~~~~~~~~~~~~~~  131 (524)
                      ..||||+++|++||++.+..+++.++.+|+++||++|++++|+.++|+|+||+.+++++.++ ...|..++....... .
T Consensus        14 ~~~PGP~~~PliGn~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~f~~r~~~~~~~~-~   92 (485)
T 3nxu_A           14 LGIPGPTPLPFLGNILSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVGF-M   92 (485)
T ss_dssp             HTCCCCCCBTTTBTGGGGGGCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTTTTTTTCCCCCCCSCCGG-G
T ss_pred             CCCCCCCCcCeecCcHHhhcChHHHHHHHHHHcCCeEEEEeCCCCEEEECCHHHHHHHHhccchhhccCCcccccccc-c
Confidence            45899999999999999988889999999999999999999999999999999999999876 455666554332221 1


Q ss_pred             cCCcccccCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhcc--CCCceehhHHHHHHHHHHHHHHHhccCC
Q 009821          132 YGGKSIGASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGR--VGSPIKVGELMFLTSLDVATRMLWGASL  209 (524)
Q Consensus       132 ~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~--~~~~vd~~~~~~~~~~dvi~~~~fG~~~  209 (524)
                      ..+....+|+.|+++|+.+. +.|+...++.+.+.+.+.++++++.+.+.  .+.++|+.+.+..+++|+|+.++||.++
T Consensus        93 ~~~l~~~~g~~w~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~g~~~d~~~~~~~~~~dvi~~~~fG~~~  171 (485)
T 3nxu_A           93 KSAISIAEDEEWKRLRSLLS-PTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNI  171 (485)
T ss_dssp             GGSTTTCCHHHHHHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEHHHHHHHHHHHHHHHHHHSCCC
T ss_pred             ccCccccCCcHHHHHHhhcC-hhcCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcCcHHHHHHHHHHHHHHHHHcCCcc
Confidence            22233338899999999997 89999999999999999999999998653  5788999999999999999999999998


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHhcCC---Ccccccccccc----cCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCC
Q 009821          210 RGEDWDAVAIQFREVLEEMFQVLGSG---NISDLFPLLTR----FDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNE  282 (524)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~p~l~~----~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~  282 (524)
                      +..+..  ...+...+...+......   .....+|++.+    +......   .+..+.+.+.+++.++++.+..    
T Consensus       172 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~----  242 (485)
T 3nxu_A          172 DSLNNP--QDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFP---REVTNFLRKSVKRMKESRLEDT----  242 (485)
T ss_dssp             CGGGCT--TCHHHHHHTTSCCCCTTSHHHHHHHHCTTHHHHHHHTTCCSSC---HHHHHHHHHHHHHHHHHHHHCC----
T ss_pred             ccccCC--CcHHHHHHHHHhchhhHHHHHHHHHHhhhhHHHHHHhhhhhch---HHHHHHHHHHHHHHHHHHHhcc----
Confidence            764321  122222222111000000   00112332211    1111111   1233344455555554443221    


Q ss_pred             CCCcccHHHHHHHHhhcC----CCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCC
Q 009821          283 GKSSKDFLQTLLELQQQG----DYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDS  358 (524)
Q Consensus       283 ~~~~~d~l~~ll~~~~~~----~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~  358 (524)
                      .....|+++.+++.....    +..++++++.++++ .+++||+|||+++++|++++|++||++|+|+|+|++++++.++
T Consensus       243 ~~~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~-~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~  321 (485)
T 3nxu_A          243 QKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSI-IFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKA  321 (485)
T ss_dssp             ---CCCHHHHHHHHHC--------CCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTTC
T ss_pred             CCCcccHHHHHHHhhhccccccccCCCHHHHHHHHH-HHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhccCC
Confidence            334579999999875432    34589999999999 9999999999999999999999999999999999999998878


Q ss_pred             cccccccCCChhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccc
Q 009821          359 VVEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLED  438 (524)
Q Consensus       359 ~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~  438 (524)
                      .++++++.+||||+|||+|+||++|+++. ++|.+.+|++++||.||||+.|.++.+++||||++|+||++||||||+++
T Consensus       322 ~~~~~~~~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~i~g~~Ip~Gt~V~~~~~~~~~d~~~~~dp~~F~PeR~l~~  400 (485)
T 3nxu_A          322 PPTYDTVLQMEYLDMVVNETLRLFPIAMR-LERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKK  400 (485)
T ss_dssp             CCCHHHHHHCHHHHHHHHHHHHHSCSCSC-EEEECCSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTTSCCGGGGSHH
T ss_pred             CCCHHHHhcChHHHHHHHHHHhcCCCccC-cceeeCCCeeECCEEECCCCEEEEchHHhcCChhhcCCccCcCccccCCC
Confidence            89999999999999999999999999997 78999999999999999999999999999999999999999999999975


Q ss_pred             cCCCcccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCCCCCcccccccccccCCCceeeeecCCCc
Q 009821          439 VKIGDFRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTKFDLSDKLLMALKKSEPLVVIPTPRSLS  518 (524)
Q Consensus       439 ~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~~  518 (524)
                      +..   ...+..|+|||+|+|.|+|++||.+|++++++.|+++|++++.++.+.+.......+..++.+++|++++|+..
T Consensus       401 ~~~---~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~r~~~  477 (485)
T 3nxu_A          401 NKD---NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGGLLQPEKPVVLKVESRDGT  477 (485)
T ss_dssp             HHT---TSCTTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEECCTTCCSSCCBCSSSSCCBSSCCEEEEEEC---
T ss_pred             ccc---cCCCCCccCCCCCCcCCchHHHHHHHHHHHHHHHHHhcEEEeCCCCCCCcccCCCeeccCCCCeEEEEEEccCC
Confidence            422   22456799999999999999999999999999999999999987754444444556777878999999999876


Q ss_pred             ccc
Q 009821          519 ALE  521 (524)
Q Consensus       519 ~~~  521 (524)
                      +-.
T Consensus       478 ~~~  480 (485)
T 3nxu_A          478 VSG  480 (485)
T ss_dssp             ---
T ss_pred             CCC
Confidence            543


No 13 
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=100.00  E-value=2.7e-76  Score=591.81  Aligned_cols=446  Identities=26%  Similarity=0.398  Sum_probs=351.5

Q ss_pred             CCCCCCCCCCCCCCceecccccC-CCChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCcccc
Q 009821           48 TRSTPPLPPGPRALPLVGNILSA-EPNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAA  126 (524)
Q Consensus        48 ~~~~~~~ppgp~~~p~iG~~~~~-~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~  126 (524)
                      ..+..+.||||++      ++++ ..+++..+.+++++||+||++++|+.++++|+||+.+++++.++...|.+++....
T Consensus        24 ~~~~~~lPPGP~~------l~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~~f~~r~~~~~   97 (496)
T 3qz1_A           24 KLRNLHLPPLVPG------FLHLLQPNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQIPS   97 (496)
T ss_dssp             -----CCCCBCSC------SCTTSSSCHHHHHHHGGGTSCSEEEECSSSSCEEEECSTTHHHHTTTTSCSTTCBCCCCTT
T ss_pred             hccCCCCCcCCcc------ccccCCCcchHHHHHHHHHhCCEEEEEeCCcCEEEECCHHHHHHHHHhCcHhhCCCCCcch
Confidence            3455678999986      4444 67899999999999999999999999999999999999999888777877765443


Q ss_pred             hhhhccC--Cccccc-CCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHHHHH
Q 009821          127 ASVLTYG--GKSIGA-SPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVGELMFLTSLDVATRM  203 (524)
Q Consensus       127 ~~~~~~~--~~~~~~-~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~dvi~~~  203 (524)
                      ......+  +....+ |+.|+++|+.+. +.|+...++.+.+.+.++++++++.+....++++|+.+.+..+++|+|+++
T Consensus        98 ~~~~~~~~~~l~~~~~g~~w~~~Rr~~~-~~f~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~dvi~~~  176 (496)
T 3qz1_A           98 YKLVSQRCQDISLGDYSLLWKAHKKLTR-SALLLGTRSSMEPWVDQLTQEFCERMRVQAGAPVTIQKEFSLLTCSIICYL  176 (496)
T ss_dssp             TTTSCTTCCCSSSSCCSHHHHHHHHHHH-HHHHC--CCCHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHTHHHHHHTTTT
T ss_pred             HHHhcCCCCceEECCCCHHHHHHHHHHH-HHHhhccHhhHHHHHHHHHHHHHHHHHhcCCCccCHHHHHHHHHHHHHHHH
Confidence            3322222  222336 999999999997 778777788899999999999999997656788999999999999999999


Q ss_pred             HhccCCCCCCchHHHHHHHHHHHHHHHHhcC--CCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCC
Q 009821          204 LWGASLRGEDWDAVAIQFREVLEEMFQVLGS--GNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMN  281 (524)
Q Consensus       204 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~  281 (524)
                      +||.    .+ +.....+.+.+...+.....  ......+|++.+++. ...++..+..+.+.+++.+.++++++..+  
T Consensus       177 ~fG~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--  248 (496)
T 3qz1_A          177 TFGN----KE-DTLVHAFHDCVQDLMKTWDHWSIQILDMVPFLRFFPN-PGLWRLKQAIENRDHMVEKQLRRHKESMV--  248 (496)
T ss_dssp             STTC----CC-HHHHHHHHHHHHTTTTTTSSHHHHHHHHCGGGCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHSCC--
T ss_pred             hcCC----CC-ChHHHHHHHHHHHHHHHhccchhHHHHhHHHHHhCCh-HHHHHHHHHHHHHHHHHHHHHHHHHhhcc--
Confidence            9998    11 11223344443333222111  123345676666542 33466778888889999999988876543  


Q ss_pred             CCCCcccHHHHHHHHhhcC----C-CCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcC
Q 009821          282 EGKSSKDFLQTLLELQQQG----D-YSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVAR  356 (524)
Q Consensus       282 ~~~~~~d~l~~ll~~~~~~----~-~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~  356 (524)
                       .....|+++.+++...+.    + ..++++++.+++. .+++||+|||+++++|++++|++||++|+|+|+|++++++.
T Consensus       249 -~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~-~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~  326 (496)
T 3qz1_A          249 -AGQWRDMTDYMLQGVGRQRVEEGPGQLLEGHVHMSVV-DLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGP  326 (496)
T ss_dssp             -SSCCSSSHHHHTTSSTTCCC-----CCCTHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCS
T ss_pred             -CCCccchHHHHHHHHHhccccCCcccccHHHHHHHHH-HHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC
Confidence             234578999999865432    1 2688999999998 99999999999999999999999999999999999999986


Q ss_pred             ----CCcccccccCCChhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCC
Q 009821          357 ----DSVVEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQP  432 (524)
Q Consensus       357 ----~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~P  432 (524)
                          ++.+ .+++.+||||+|||+|+||++|+++..++|.+.+|++++||.||||+.|.++.+++||||++|+||++|||
T Consensus       327 ~~~~~~~~-~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~P  405 (496)
T 3qz1_A          327 GASCSRVT-YKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQPHEFRP  405 (496)
T ss_dssp             SSSSSCCS-TTGGGSCHHHHHHHHHHHHHSCSSSSCCCEECSSCEECSSSEECTTCEEEECHHHHTTCTTTSSSTTSCCC
T ss_pred             CcccCCCC-hhhhhcCcHHHHHHHHHHHhcCCcccccCccCCCCceECCEEeCCCCEEEechHHhhCChhhcCCcccCCc
Confidence                4566 89999999999999999999999998788999999999999999999999999999999999999999999


Q ss_pred             CccccccCCCcccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCC-CCCcccc--cccccccCCCce
Q 009821          433 DRFLEDVKIGDFRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGT-KFDLSDK--LLMALKKSEPLV  509 (524)
Q Consensus       433 eR~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~-~~~~~~~--~~~~~~~~~~~~  509 (524)
                      |||++++.       ...|+|||+|+|.|||++||.+|+++++++|+++|++++.++. ..+....  .+++..+ .+++
T Consensus       406 eR~l~~~~-------~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  477 (496)
T 3qz1_A          406 DRFLEPGA-------NPSALAFGCGARVCLGESLARLELFVVLARLLQAFTLLPPPVGALPSLQPDPYCGVNLKV-QPFQ  477 (496)
T ss_dssp             CCCC---C-------CCCCCSSCCSSSSCSSHHHHHHHHHHHHHHHHHHCCCCCCTTCCCCCSCCSCCCSSCCCC-CCCC
T ss_pred             ccccCCCC-------CcCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhcEEeCCCCCCCCCCCcccCcceEecC-CceE
Confidence            99996431       2379999999999999999999999999999999999988653 2333333  3555555 5899


Q ss_pred             eeeecCCCcc
Q 009821          510 VIPTPRSLSA  519 (524)
Q Consensus       510 v~~~~r~~~~  519 (524)
                      |++++|++.+
T Consensus       478 v~~~~R~~~~  487 (496)
T 3qz1_A          478 VRLQPRGVEA  487 (496)
T ss_dssp             CCCCCC----
T ss_pred             EEEEEecccc
Confidence            9999998755


No 14 
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=100.00  E-value=1.5e-74  Score=580.24  Aligned_cols=442  Identities=19%  Similarity=0.327  Sum_probs=349.2

Q ss_pred             CCCCCCCCCCCceecccccCCC----ChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCcccc
Q 009821           51 TPPLPPGPRALPLVGNILSAEP----NLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAA  126 (524)
Q Consensus        51 ~~~~ppgp~~~p~iG~~~~~~~----~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~  126 (524)
                      +.+.||||+++|++||++.+..    ..+..+.+|+++||+||++++|+.++++++||+.++++++++  .+.+++....
T Consensus        43 ~~~~pPGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~il~~~--~~~~r~~~~~  120 (503)
T 3s79_A           43 GTSSIPGPGYCMGIGPLISHGRFLWMGIGSACNYYNRVYGEFMRVWISGEETLIISKSSSMFHIMKHN--HYSSRFGSKL  120 (503)
T ss_dssp             --CCCCSCCCCSSSHHHHHHHHHHHHCHHHHHHHHHHHSCSEEEEESSSSEEEEECCHHHHHHHHHSG--GGCCCCCCHH
T ss_pred             ccCCCCCCCCCceeeehhccccccccchhHHHHHHHHHhCCeEEEEeCCccEEEECCHHHHHHHHhcC--CCCCcchhhh
Confidence            3457999999999999988742    345688899999999999999999999999999999999754  3656543322


Q ss_pred             -hhhhccCCccc--c-cCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhcc--CCCceehhHHHHHHHHHHH
Q 009821          127 -ASVLTYGGKSI--G-ASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGR--VGSPIKVGELMFLTSLDVA  200 (524)
Q Consensus       127 -~~~~~~~~~~~--~-~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~--~~~~vd~~~~~~~~~~dvi  200 (524)
                       .......+.++  . +|+.|+++|+.+. +.|+...++.+.+.+.+++.++++.+.+.  .++++|+.+++..+++|++
T Consensus       121 ~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~-~~f~~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~vdl~~~~~~~~~~vi  199 (503)
T 3s79_A          121 GLQCIGMHEKGIIFNNNPELWKTTRPFFM-KALSGPGLVRMVTVCAESLKTHLDRLEEVTNESGYVDVLTLLRRVMLDTS  199 (503)
T ss_dssp             HHHHHTCTTSSSTTCCCHHHHHHHHHHHH-HHTSTHHHHHHHHHHHHHHHHHHTTGGGTBCTTSCBCHHHHHHHHHHHHH
T ss_pred             hhhhhccCCCceeeCCCccHHHHHHHhhh-HhhChHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEcHHHHHHHHHHHHH
Confidence             22222223332  2 6789999999997 88999999999999999999999888653  4578999999999999999


Q ss_pred             HHHHhccCCCCCCchHHHHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCC
Q 009821          201 TRMLWGASLRGEDWDAVAIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDM  280 (524)
Q Consensus       201 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~  280 (524)
                      +.++||.++++.   .....+...+.........   ..++..+.     ...++..+..+.+.+++.+.++++++..+.
T Consensus       200 ~~~~fG~~~~~~---~~~~~~~~~~~~~~~~~~~---~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  268 (503)
T 3s79_A          200 NTLFLRIPLDES---AIVVKIQGYFDAWQALLIK---PDIFFKIS-----WLYKKYEKSVKDLKDAIEVLIAEKRRRIST  268 (503)
T ss_dssp             HHHHTCCCCCHH---HHHHHHHHHHHHHHHHTTC---CHHHHHSG-----GGTHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHcCcccCch---hHHHHHHHHHHHHHHHhcC---cHHHhhcc-----hhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            999999988521   1222333333332222111   11111111     123556677778888888888776654321


Q ss_pred             C-CCCCcccHHHHHHHHhhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCc
Q 009821          281 N-EGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSV  359 (524)
Q Consensus       281 ~-~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~  359 (524)
                      . ......|+++.+++..++  ..++++++.+++. .+++||+|||+++++|++++|++||++|+|+|+|++++++ ++.
T Consensus       269 ~~~~~~~~d~l~~ll~~~~~--~~l~~~~i~~~~~-~~~~AG~~Tta~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~-~~~  344 (503)
T 3s79_A          269 EEKLEECMDFATELILAEKR--GDLTRENVNQCIL-EMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIG-ERD  344 (503)
T ss_dssp             CTTTTTTCCHHHHHHHHHHT--TSSCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTT-TSC
T ss_pred             ccccchHHHHHHHHHHhccc--CCCCHHHHHHHHH-HHHHHcccHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC-CCC
Confidence            1 122345999999987654  4589999999988 9999999999999999999999999999999999999998 678


Q ss_pred             ccccccCCChhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCcccccc
Q 009821          360 VEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDV  439 (524)
Q Consensus       360 ~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~  439 (524)
                      ++.+++.+|||++|||+|+||++|+++. ..|.+.+|++++||.||||+.|.++.+++||| ++|+||++||||||++..
T Consensus       345 ~~~~~~~~lpyl~avi~E~lRl~p~~~~-~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d-~~~~dp~~F~PeRf~~~~  422 (503)
T 3s79_A          345 IKIDDIQKLKVMENFIYESMRYQPVVDL-VMRKALEDDVIDGYPVKKGTNIILNIGRMHRL-EFFPKPNEFTLENFAKNV  422 (503)
T ss_dssp             CCHHHHTTCHHHHHHHHHHHHHSCSSCC-EEEECSSCEEETTEEECTTCEEEECHHHHTTT-SSCSSTTSCCGGGGSSCC
T ss_pred             CCHHHHhcCHHHHHHHHhhhccCCCccc-ccccccCCeeECCEEECCCCEEEeehHHhCCC-ccCCChhhCChhhcCCCC
Confidence            8999999999999999999999999998 46999999999999999999999999999998 999999999999999531


Q ss_pred             CCCcccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCCCC-CcccccccccccCCC---ceeeeecC
Q 009821          440 KIGDFRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTKF-DLSDKLLMALKKSEP---LVVIPTPR  515 (524)
Q Consensus       440 ~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~-~~~~~~~~~~~~~~~---~~v~~~~r  515 (524)
                             ....|+|||+|+|.|||++||.+|++++++.|+++|++++++|.+. +.....+.+..+...   ++|+++||
T Consensus       423 -------~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~v~~~~R  495 (503)
T 3s79_A          423 -------PYRYFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKTLQGQCVESIQKIHDLSLHPDETKNMLEMIFTPR  495 (503)
T ss_dssp             -------CTTTCCSSCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEEESTTCCTTTSCEEESSSEEECTTSCCCCEEEEEC
T ss_pred             -------CcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHheEEEeCCCCCccccccccceeecCCCccceeeEEeccC
Confidence                   2357999999999999999999999999999999999999887543 333344666666544   99999999


Q ss_pred             CCcc
Q 009821          516 SLSA  519 (524)
Q Consensus       516 ~~~~  519 (524)
                      +++.
T Consensus       496 ~~~~  499 (503)
T 3s79_A          496 NSDR  499 (503)
T ss_dssp             C---
T ss_pred             Cchh
Confidence            8654


No 15 
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=100.00  E-value=5.6e-74  Score=565.12  Aligned_cols=436  Identities=22%  Similarity=0.315  Sum_probs=348.7

Q ss_pred             CCCCCCCCCCCCceecccccCCCChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCcccchhh
Q 009821           50 STPPLPPGPRALPLVGNILSAEPNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAAASV  129 (524)
Q Consensus        50 ~~~~~ppgp~~~p~iG~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~~~  129 (524)
                      ++.+.||||+++|++||++.+..+++ ++.+++++||++|++++++.+.++++||+.+++++.++...|..+........
T Consensus         9 ~~~~~pPgp~~~P~iG~~~~~~~~~~-~~~~~~~~yg~v~~~~~~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~~~~~   87 (444)
T 2ve3_A            9 NSLPIPPGDFGLPWLGETLNFLNDGD-FGKKRQQQFGPIFKTRLFGKNVIFISGALANRFLFTKEQETFQATWPLSTRIL   87 (444)
T ss_dssp             CCCCCCCCCCCBTTTBTHHHHHHCTT-HHHHHHHHHCSSEEEEETTEEEEEECSHHHHHHHTSSCTTTEEEECCHHHHHH
T ss_pred             CCCCCCCCCCCCCccccHHHHhcCcH-HHHHHHHHcCCeEEEeeCCCCEEEEcCHHHHHHHHhCCCcccccchhHHHHHH
Confidence            45567999999999999987755566 88899999999999998888899999999999999887554553321111112


Q ss_pred             hccCCcccccCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHHHHHHhccCC
Q 009821          130 LTYGGKSIGASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVGELMFLTSLDVATRMLWGASL  209 (524)
Q Consensus       130 ~~~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~  209 (524)
                      .+..+....+|+.|+++|+.+. +.|+...++.+.+.+.++++++++.+..  ++++|+.+.+..+++|++++++|| .+
T Consensus        88 ~g~~~l~~~~g~~~~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~--~~~vd~~~~~~~~~~~vi~~~~fG-~~  163 (444)
T 2ve3_A           88 LGPNALATQMGEIHRSRRKILY-QAFLPRTLDSYLPKMDGIVQGYLEQWGK--ANEVIWYPQLRRMTFDVAATLFMG-EK  163 (444)
T ss_dssp             HCTTSGGGCCHHHHHHHHHHHH-GGGCHHHHHTTHHHHHHHHHHHHHHHHH--SSEEEHHHHHHHHHHHHHHHHHTC-HH
T ss_pred             hCccccccCCchHHHHHHHHHH-hhcCHHHHHHHHHHHHHHHHHHHHHhcC--CCcEeHHHHHHHHHHHHHHHHHcC-CC
Confidence            2211222338899999999996 8999999999999999999999999864  678999999999999999999999 33


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcccH
Q 009821          210 RGEDWDAVAIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSSKDF  289 (524)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~  289 (524)
                      ...+     .++.+.+.........  +...+|..       ..++..+..+.+.+++.+.+++++++     .....|+
T Consensus       164 ~~~~-----~~~~~~~~~~~~~~~~--~~~~~p~~-------~~~~~~~~~~~~~~~~~~~i~~r~~~-----~~~~~d~  224 (444)
T 2ve3_A          164 VSQN-----PQLFPWFETYIQGLFS--LPIPLPNT-------LFGKSQRARALLLAELEKIIKARQQQ-----PPSEEDA  224 (444)
T ss_dssp             HHSC-----TTHHHHHHHHHHHHSS--CCCCSTTS-------HHHHHHHHHHHHHHHHHHHHHHHHTS-----CCCCSSH
T ss_pred             cccH-----HHHHHHHHHHHHHHhc--CCccCCCc-------HHHHHHHHHHHHHHHHHHHHHHHhcC-----CCCccCH
Confidence            2211     1222333333222211  11112211       12445667778888888888887654     2245799


Q ss_pred             HHHHHHHhhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcccccccCCCh
Q 009821          290 LQTLLELQQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLP  369 (524)
Q Consensus       290 l~~ll~~~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~~l~~lp  369 (524)
                      ++.+++..++++..++++++.+++. .+++||+|||+++++|++++|++||++|+|||+|++.+++.+ .++.+++.+||
T Consensus       225 l~~ll~~~~~~~~~l~~~~i~~~~~-~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~-~~~~~~l~~lp  302 (444)
T 2ve3_A          225 LGILLAARDDNNQPLSLPELKDQIL-LLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLSQ-ELTAETLKKMP  302 (444)
T ss_dssp             HHHHHHCBCTTSCBCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHSSCCSS-CCCHHHHTTCH
T ss_pred             HHHHHhccccCCCCCCHHHHHHHHH-HHHHHcchHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhccCC-CCChhhhhcCh
Confidence            9999987654455689999999998 999999999999999999999999999999999999998754 78999999999


Q ss_pred             hHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCcccCCcc
Q 009821          370 YLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGDFRGNNF  449 (524)
Q Consensus       370 yl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~~~~~~  449 (524)
                      ||+|||+|+||++|+++. .+|.+.+|++++||.||||+.|.++.+++||||++|+||++||||||++.+..  ....+.
T Consensus       303 yl~a~i~E~lRl~p~~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~l~~~~~--~~~~~~  379 (444)
T 2ve3_A          303 YLDQVLQEVLRLIPPVGG-GFRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSA--THNPPF  379 (444)
T ss_dssp             HHHHHHHHHHHHSCSSCE-EEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCGGGSSTTSTT--TTSCTT
T ss_pred             HHHHHHHHHHhcCCCccC-ccceeCCCeeECCEEECCCCEEEechHHhcCChhhcCCcCccCccccCCCCcc--cCCCCc
Confidence            999999999999999998 57999999999999999999999999999999999999999999999964321  122345


Q ss_pred             ceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCCCCCcccccccccccCCCceeeeecCC
Q 009821          450 NYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTKFDLSDKLLMALKKSEPLVVIPTPRS  516 (524)
Q Consensus       450 ~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  516 (524)
                      .|+|||+|+|.|||++||.+|++++++.|+++|++++.++.+.+.  ....+..+..+++|++++|+
T Consensus       380 ~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~--~~~~~~~~~~~l~v~~~~r~  444 (444)
T 2ve3_A          380 AHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLPGQNLEL--VVTPSPRPKDNLRVKLHSLM  444 (444)
T ss_dssp             SCCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEEECSSCCCCE--EESSSEEETTCCEEEEEEC-
T ss_pred             eeeCCCCCCccCccHHHHHHHHHHHHHHHHHhCEEEeCCCCCcce--eccccccCCCCceEEEEeCC
Confidence            799999999999999999999999999999999999877644433  23456667788999999884


No 16 
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=100.00  E-value=4.5e-74  Score=574.33  Aligned_cols=455  Identities=20%  Similarity=0.232  Sum_probs=350.4

Q ss_pred             CCCCCCCCCCCCCCceecccccC-----CCChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCC
Q 009821           48 TRSTPPLPPGPRALPLVGNILSA-----EPNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRD  122 (524)
Q Consensus        48 ~~~~~~~ppgp~~~p~iG~~~~~-----~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~  122 (524)
                      ..++.+.+|||++.|+. +++.+     ..+++..+.+++++||+||++++|+.++|+++||+++++|+.+++ .|++++
T Consensus         4 ~~~pL~~~PGP~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~kYG~i~~~~~g~~~~vvv~dp~~~~~il~~~~-~f~~r~   81 (487)
T 3n9y_A            4 SPRPFNEIPSPGDNGWL-NLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALLFKSEG-PNPERF   81 (487)
T ss_dssp             CCBCGGGSCCSCSCHHH-HHHHHHHHTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHHTCC-SSCCCC
T ss_pred             CCCCHhhCCCCCCCChh-hHHHHHhcCCCcchhHHHHHHHHHcCceeeccCCCCCEEEEcCHHHHHHHHHhCC-CCCCCC
Confidence            34567789999988875 65544     236788999999999999999999999999999999999998765 476665


Q ss_pred             cccch---hhhccCCccc--ccCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhcc------CCCceehhHH
Q 009821          123 PSAAA---SVLTYGGKSI--GASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGR------VGSPIKVGEL  191 (524)
Q Consensus       123 ~~~~~---~~~~~~~~~~--~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~------~~~~vd~~~~  191 (524)
                      .....   ......+.++  .+|+.|+++|+.+...+|+...++.+.+.+.++++++++.+...      ++.++|+.+.
T Consensus        82 ~~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~vd~~~~  161 (487)
T 3n9y_A           82 LIPPWVAYHQYYQRPIGVLLKKSAAWKKDRVALNQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDD  161 (487)
T ss_dssp             CCHHHHHHHHHTTCCCCGGGCCHHHHHHHHHHHHHHHTSHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSSSEEECCHHH
T ss_pred             CCcHHHHHHHHccccCCCccCCcHHHHHHHHhcCcccCCchHHHHhhhHHHHHHHHHHHHHHHHhcccccCCCCccHHHH
Confidence            43221   1111122223  38899999999997446999999999999999999999988652      2457999999


Q ss_pred             HHHHHHHHHHHHHhccCCCCCCc--hHHHHHHHHHHHHHHHHhcCCCccccccc--ccccCccchHHHHHHHHHHHHHHH
Q 009821          192 MFLTSLDVATRMLWGASLRGEDW--DAVAIQFREVLEEMFQVLGSGNISDLFPL--LTRFDLQGLESKAKKLTVRLDKIF  267 (524)
Q Consensus       192 ~~~~~~dvi~~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--l~~~~~~~~~~~~~~~~~~l~~~~  267 (524)
                      +..+++|+|++++||.+++..+.  ......+.+.+..++.....   ...+|.  +.++. ....+...+..+.+.+.+
T Consensus       162 ~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~l~~~~~-~~~~~~~~~~~~~~~~~~  237 (487)
T 3n9y_A          162 LFRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFHTSVP---MLNLPPDLFRLFR-TKTWKDHVAAWDVIFSKA  237 (487)
T ss_dssp             HHHHHHHHHHHHHHSSCCCTTSSSCCHHHHHHHHHHHHHHHHHGG---GTTSCHHHHHHHC-HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcccccccCCCCChHHHHHHHHHHHHHHHHHH---HHhcCHHHHhhcc-cHHHHHHHHHHHHHHHHH
Confidence            99999999999999999875432  12334555555555543321   122332  22221 122233333344444444


Q ss_pred             HHhhccccCCC--CCCCCCCcccHHHHHHHHhhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHH
Q 009821          268 ESLLRPGQSGQ--DMNEGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRK  345 (524)
Q Consensus       268 ~~~i~~~~~~~--~~~~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~k  345 (524)
                      .+.++++.++.  .........|+++.+++.     ..++++++.+++. .+++||+|||+++++|++++|++||++|+|
T Consensus       238 ~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~-----~~l~~~ei~~~~~-~~~~AG~dTta~~l~~~l~~L~~~P~~~~k  311 (487)
T 3n9y_A          238 DIYTQNFYWELRQKGSVHHDYRGILYRLLGD-----SKMSFEDIKANVT-EMLAGGVDTTSMTLQWHLYEMARNLKVQDM  311 (487)
T ss_dssp             HHHHHHHHHHHHHHCCCCSSCCCHHHHHHHS-----CSSCHHHHHHHHH-HHHHHHHTHHHHHHHHHHHHHHHCHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCcccchHHHHHHHHhc-----CCCCHHHHHHHHH-HHHHHhhhhHHHHHHHHHHHHHhChHHHHH
Confidence            44444332210  001123457899999863     3588999999999 999999999999999999999999999999


Q ss_pred             HHHHHHHhhcCCCcccccccCCChhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCC
Q 009821          346 ARNELEQVVARDSVVEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWE  425 (524)
Q Consensus       346 lr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~  425 (524)
                      +++|++++++.++.++.+++.+||||+|||+|+||++|+++. ++|.+.+|++++||.||+|+.|.++.+++||||++|+
T Consensus       312 l~~Ei~~~~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~-~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~  390 (487)
T 3n9y_A          312 LRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVT-LQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFF  390 (487)
T ss_dssp             HHHHHHHHHHHTTTCHHHHTTSCHHHHHHHHHHHHHSCSSSE-EEEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTSS
T ss_pred             HHHHHHHhhcccccchhhhhhhCHHHHHHHHHHhhhCCcccc-cceeecCceeeCCEEECCCCEEEeCcHHhcCCcccCC
Confidence            999999999876667799999999999999999999999986 7899999999999999999999999999999999999


Q ss_pred             CCCCCCCCccccccCCCcccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCCCCCcccccccccccC
Q 009821          426 NPQDFQPDRFLEDVKIGDFRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTKFDLSDKLLMALKKS  505 (524)
Q Consensus       426 dp~~F~PeR~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~  505 (524)
                      ||++||||||++.+.    ...+..|+|||+|+|.|||++||.+|++++++.|+++|++++.++.++  ......+..++
T Consensus       391 dp~~F~PeR~l~~~~----~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~--~~~~~~~~~p~  464 (487)
T 3n9y_A          391 DPENFDPTRWLSKDK----NITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEIQHLSDV--GTTFNLILMPE  464 (487)
T ss_dssp             STTSCCGGGGTCSCT----TSSTTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEECTTCCCC--CEEESSSEEES
T ss_pred             CcccCChhhcCCCCC----CCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCEEEecCCccc--ccceeeeecCC
Confidence            999999999996432    123568999999999999999999999999999999999999876433  33446777888


Q ss_pred             CCceeeeecCCCcccc
Q 009821          506 EPLVVIPTPRSLSALE  521 (524)
Q Consensus       506 ~~~~v~~~~r~~~~~~  521 (524)
                      .+++|++++|++.+..
T Consensus       465 ~~~~~~~~~r~~~~~~  480 (487)
T 3n9y_A          465 KPISFTFWPFNQEATQ  480 (487)
T ss_dssp             SCCCEEEEEC------
T ss_pred             CCceeEEEECCcchhh
Confidence            8999999999887644


No 17 
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=100.00  E-value=3.8e-73  Score=560.98  Aligned_cols=444  Identities=18%  Similarity=0.290  Sum_probs=336.4

Q ss_pred             CCCCC-CCCCceecccccCCCChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCcccchhhhc
Q 009821           53 PLPPG-PRALPLVGNILSAEPNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAAASVLT  131 (524)
Q Consensus        53 ~~ppg-p~~~p~iG~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~~~~~  131 (524)
                      +.||| |.++|++||+..+..+++.++.+++++||+||++++++.++++|+||+.+++++.+++..|+++..........
T Consensus         4 ~~PPg~p~~~P~iG~~~~~~~~~~~~~~~l~~~yG~v~~~~~~~~~~~vv~~~~~~~~il~~~~~~~~~~~~~~~~~~~~   83 (455)
T 2cib_A            4 VALPRVSGGHDEHGHLEEFRTDPIGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYPFMTPIF   83 (455)
T ss_dssp             -CCCBCSCCCBTTBTHHHHTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEECTTSCGGGHHHH
T ss_pred             CCCCCCCCCCCCccCHHHHhhChHHHHHHHHHHcCCEEEEEeCCceEEEECCHHHHHHHHhcCccccCcccchhHHHhhc
Confidence            45787 88899999998887889999999999999999999999999999999999999987665566655332221111


Q ss_pred             cCCcccccCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHHHHHHhccCCCC
Q 009821          132 YGGKSIGASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVGELMFLTSLDVATRMLWGASLRG  211 (524)
Q Consensus       132 ~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~  211 (524)
                      ..+ .+.+++.|+++|+.+. +.|+...++.+.+.+.++++++++.+..  ++++|+.+.+..+++|++++++||.++..
T Consensus        84 g~~-~~~~~~~~~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~~~~--~~~vd~~~~~~~~~~~vi~~~~fG~~~~~  159 (455)
T 2cib_A           84 GEG-VVFDASPERRKEMLHN-AALRGEQMKGHAATIEDQVRRMIADWGE--AGEIDLLDFFAELTIYTSSACLIGKKFRD  159 (455)
T ss_dssp             C----------------------CCHHHHHHHHHHHHHHHHHHHTTCCS--EEEEEHHHHHHHHHHHHHHHHHTCHHHHT
T ss_pred             CCc-cccCcHHHHHHHhhhc-cccCHHHHHHHHHHHHHHHHHHHHHhCC--CCcEeHHHHHHHHHHHHHHHHHcCCCcch
Confidence            111 2348899999999996 8999999999999999999999988754  45799999999999999999999998764


Q ss_pred             CCchHHHHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcccHHH
Q 009821          212 EDWDAVAIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSSKDFLQ  291 (524)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~  291 (524)
                      ...    .++...+..+....  .....++|++.   . ...++..+..+.+.+++.+.+++++++...  .....|+++
T Consensus       160 ~~~----~~~~~~~~~~~~~~--~~~~~~~p~l~---~-~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~--~~~~~dll~  227 (455)
T 2cib_A          160 QLD----GRFAKLYHELERGT--DPLAYVDPYLP---I-ESFRRRDEARNGLVALVADIMNGRIANPPT--DKSDRDMLD  227 (455)
T ss_dssp             TCC----HHHHHHHHHHHTTC--CGGGGTCTTCS---C-HHHHHHHHHHHHHHHHHHHHHHHHHHCC-------CCCHHH
T ss_pred             hhh----HHHHHHHHHHHhhh--hHHHHhcccCC---C-hhHHHHHHHHHHHHHHHHHHHHHHHhcccC--CCCcccHHH
Confidence            332    23444444332111  11122344321   1 123445667778888888888887654320  112349999


Q ss_pred             HHHHHhhcCCCC-CcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcccccccCCChh
Q 009821          292 TLLELQQQGDYS-LSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLPY  370 (524)
Q Consensus       292 ~ll~~~~~~~~~-l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~~l~~lpy  370 (524)
                      .|++...+++.. ++++++.++++ .+++||+|||+++++|++++|++||++|+|||+|++++++.++.++.+++.+|||
T Consensus       228 ~ll~~~~~~~~~~l~~~~i~~~~~-~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~l~~lpy  306 (455)
T 2cib_A          228 VLIAVKAETGTPRFSADEITGMFI-SMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQ  306 (455)
T ss_dssp             HHHHCBCTTSSBSCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHGGGCCCHHHHTTSCCHH
T ss_pred             HHHHhhhhcCCCCCCHHHHHHHHH-HHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHHhcCHH
Confidence            999875444444 89999999999 9999999999999999999999999999999999999998767789999999999


Q ss_pred             HHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCcccCCccc
Q 009821          371 LEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGDFRGNNFN  450 (524)
Q Consensus       371 l~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~~~~~~~  450 (524)
                      |+|||+|+||++|+++. ++|.+.+|++++||.||||+.|.++.+++||||++|+||++||||||++.+.. . ...+..
T Consensus       307 l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~l~~~~~-~-~~~~~~  383 (455)
T 2cib_A          307 LENVLKETLRLHPPLII-LMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQE-D-LLNRWT  383 (455)
T ss_dssp             HHHHHHHHHHHSCSCCC-EEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCGGGGSTTTCH-H-HHCTTT
T ss_pred             HHHHHHHHHhcCCcccc-cceeeCCCceECCEEECCCCEEEEChHHhcCCcccCCCccccCcccCCCCCcc-c-ccCCcc
Confidence            99999999999999987 68999999999999999999999999999999999999999999999964321 0 112457


Q ss_pred             eeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCCCCCcc-cccccccccCCCceeeeecCCC
Q 009821          451 YLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTKFDLS-DKLLMALKKSEPLVVIPTPRSL  517 (524)
Q Consensus       451 ~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~r~~  517 (524)
                      |+|||+|+|.|||++||.+|++++++.|+++|+++++++ +.++. .....+..++.+++|++++|+.
T Consensus       384 ~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~-~~~~~~~~~~~~~~p~~~~~v~~~~R~~  450 (455)
T 2cib_A          384 WIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQP-PESYRNDHSKMVVQLAQPAAVRYRRRTG  450 (455)
T ss_dssp             CCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHEEEEESSC-GGGCCEECSSSSCEECSCCEEEEEEC--
T ss_pred             ccCCCCCCCCCCcHHHHHHHHHHHHHHHHHheEEEeCCC-ccccccccccccccCCCCceEEEEECcc
Confidence            999999999999999999999999999999999998632 22221 1133455566689999999963


No 18 
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=100.00  E-value=8.2e-73  Score=559.78  Aligned_cols=441  Identities=19%  Similarity=0.306  Sum_probs=358.3

Q ss_pred             CCCCCCCC-CCceecccccCCCChhHHHHHHHHHhC-CeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCcccchhh
Q 009821           52 PPLPPGPR-ALPLVGNILSAEPNLHRYFTKLSQIYG-PIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAAASV  129 (524)
Q Consensus        52 ~~~ppgp~-~~p~iG~~~~~~~~~~~~~~~~~~kyG-~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~~~  129 (524)
                      ++.||||+ ++|++||++.+..+++.++.+++++|| ++|++++|+.++++|+||+.+++++.++...+.+++.......
T Consensus         2 ~~~PPg~p~~~P~iG~~~~~~~~~~~~~~~~~~~yG~~i~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~   81 (450)
T 3gw9_A            2 GKLPPVYPVTVPILGHIIQFGKSPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSPREVYSFMVP   81 (450)
T ss_dssp             CSCCCBCCCCSTTTBTHHHHHHCHHHHHHHHHHHHTCSEEEEEETTEEEEEECCGGGTHHHHSSCTTTEESTGGGGGGHH
T ss_pred             CCCCCCCCCCcchhccHHHHccCHHHHHHHHHHHhCCCeEEEEECCEeEEEEeCHHHHHHHHhCChhhccchhhHHHHHH
Confidence            34688855 499999999887789999999999999 9999999999999999999999999887777777655433322


Q ss_pred             hccCCcccc-cCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHH-HHhccCCCceehhHHHHHHHHHHHHHHHhcc
Q 009821          130 LTYGGKSIG-ASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMK-DVSGRVGSPIKVGELMFLTSLDVATRMLWGA  207 (524)
Q Consensus       130 ~~~~~~~~~-~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~-~l~~~~~~~vd~~~~~~~~~~dvi~~~~fG~  207 (524)
                      ....+.... +++.|+++|+.+. +.|+...++.+.+.+.+++.++++ .+.. .++++|+.+.+..++++++++++||.
T Consensus        82 ~~g~~~~~~~~~~~~~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~ll~~~~~~-~~~~vd~~~~~~~~~~~~i~~~~fG~  159 (450)
T 3gw9_A           82 VFGEGVAYAAPYPRMREQLNFLA-EELTIAKFQNFVPAIQHEVRKFMAANWDK-DEGEINLLEDCSTMIINTACQCLFGE  159 (450)
T ss_dssp             HHCTTSGGGSCHHHHHHHHHHHH-HTTSGGGCTTHHHHHHHHHHHHHHHHSCS-SEEEEEHHHHHHHHHHHHHHHHHSCH
T ss_pred             HhcCCcccCCCcHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHHhcc-CCCcccHHHHHHHHHHHHHHHHHcCc
Confidence            222233232 6889999999986 899999999999999999999998 5543 45679999999999999999999998


Q ss_pred             CCCCCCchHHHHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcc
Q 009821          208 SLRGEDWDAVAIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSSK  287 (524)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~  287 (524)
                      ++.....   ...+.+.+..+...  .......+|++.+++. ...++..+..+.+.+++.+.++++++... .+.....
T Consensus       160 ~~~~~~~---~~~~~~~~~~~~~~--~~~~~~~~P~l~~lp~-~~~~~~~~~~~~~~~~~~~~i~~r~~~~~-~~~~~~~  232 (450)
T 3gw9_A          160 DLRKRLD---ARRFAQLLAKMESS--LIPAAVFLPILLKLPL-PQSARCHEARTELQKILSEIIIARKEEEV-NKDSSTS  232 (450)
T ss_dssp             HHHHHSC---HHHHHHHHHHHHHT--CCGGGGTCGGGGGSCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTSCCCC
T ss_pred             chhhhhh---hHHHHHHHHHHHhc--cccchhcccchhccCC-chhHHHHHHHHHHHHHHHHHHHHHHHhhc-ccCCccc
Confidence            8754321   13444444444322  1233446777765543 23455677788888888888887764321 1134567


Q ss_pred             cHHHHHHHHhhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHh--hCcHHHHHHHHHHHHhhcCCCccccccc
Q 009821          288 DFLQTLLELQQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELL--QKPEVMRKARNELEQVVARDSVVEEFHL  365 (524)
Q Consensus       288 d~l~~ll~~~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~--~~pe~~~klr~Ei~~~~~~~~~~~~~~l  365 (524)
                      |+++.+++...+++..++++++.++++ .+++||+|||+++++|++++|+  .||++|+|+|+|++++   ++.++.+++
T Consensus       233 d~l~~ll~~~~~~~~~l~~~~i~~~~~-~~~~AG~dTta~~l~~~l~~L~~~~~p~~~~~l~~Ei~~~---~~~~~~~~~  308 (450)
T 3gw9_A          233 DLLSGLLSAVYRDGTPMSLHEVCGMIV-AAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEF---PAQLNYNNV  308 (450)
T ss_dssp             SHHHHHHHCBCTTSCBCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHSGGGHHHHHHHHHHHTTC---CSSCCHHHH
T ss_pred             hHHHHHHHhhccCCCCCCHHHHHHHHH-HHHHHhhhHhHHHHHHHHHHHcCCcchhHHHHHHHHHHhc---cCCCChHHH
Confidence            999999987655556799999999998 9999999999999999999999  9999999999999998   456788898


Q ss_pred             -CCChhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCcc
Q 009821          366 -AKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGDF  444 (524)
Q Consensus       366 -~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~  444 (524)
                       .+||||+|||+|+||++|+++. ++|.+.+|++++||.||||+.|.++.+++||||++|+||++|||||+.+       
T Consensus       309 ~~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeR~~~-------  380 (450)
T 3gw9_A          309 MDEMPFAERCARESIRRDPPLLM-LMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDEK-------  380 (450)
T ss_dssp             HHHCHHHHHHHHHHHHHSCSCCC-EEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCCS-------
T ss_pred             HHhcHHHHHHHHHHHHhCCchhc-cccccccccccCCEEECCCCEEEEChHHhhCChhhcCCccccCCCcCcC-------
Confidence             9999999999999999999997 6799999999999999999999999999999999999999999999321       


Q ss_pred             cCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCCCCCcccccccccccC-CCceeeeecCC
Q 009821          445 RGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTKFDLSDKLLMALKKS-EPLVVIPTPRS  516 (524)
Q Consensus       445 ~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~r~  516 (524)
                        .+..|+|||+|+|.|||++||.+|++++++.|+++||++++++...+. .....+..++ .+++|++++|.
T Consensus       381 --~~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~-~~~~~~~~p~~~~~~v~~~~R~  450 (450)
T 3gw9_A          381 --VEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEVPDP-DYHTMVVGPTASQCRVKYIRRK  450 (450)
T ss_dssp             --STTCCCTTCCGGGCCSSHHHHHHHHHHHHHHHHHHEEEEESSSSCCCE-ETTSSSCEECGGGCEEEEEECC
T ss_pred             --CCCceeCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEecCCCCCCC-ccccceecCCCCceEeEeeecC
Confidence              245799999999999999999999999999999999999886532222 1223455565 78999999984


No 19 
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=100.00  E-value=7.7e-72  Score=553.66  Aligned_cols=446  Identities=20%  Similarity=0.298  Sum_probs=347.0

Q ss_pred             CCCCCCCCCceecccccCC-CChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCcccch--hh
Q 009821           53 PLPPGPRALPLVGNILSAE-PNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAAA--SV  129 (524)
Q Consensus        53 ~~ppgp~~~p~iG~~~~~~-~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~--~~  129 (524)
                      +.||||+++|++||++.+. .+++..+.+++++||+||++++++.+.++|+||+.+++|+.++.  |.+.......  ..
T Consensus         3 ~~~PGP~~~p~iG~l~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~~~~~~~il~~~~--f~~~~~~~~~~~~~   80 (470)
T 2ij2_A            3 KEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDESR--FDKNLSQALKFVRD   80 (470)
T ss_dssp             CCCCCCCCCGGGTTGGGGCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHTCTTT--EEECCCHHHHHHHH
T ss_pred             CCCCCCCCCCccccHHHHhcccchHHHHHHHHHhCCeEEEecCCccEEEECCHHHHHHHHhhcC--cCcCchhHHHHHHH
Confidence            4689999999999998874 57788999999999999999999999999999999999996532  4332211111  11


Q ss_pred             hccCCcccc--cCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhcc-CCCceehhHHHHHHHHHHHHHHHhc
Q 009821          130 LTYGGKSIG--ASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGR-VGSPIKVGELMFLTSLDVATRMLWG  206 (524)
Q Consensus       130 ~~~~~~~~~--~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~-~~~~vd~~~~~~~~~~dvi~~~~fG  206 (524)
                      ....+....  +|+.|+++|+.+. +.|+...++.+.+.+.+.++++++.+... .++++|+.+.+..+++|+|+.++||
T Consensus        81 ~~~~~l~~~~~~g~~w~~~Rr~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~vd~~~~~~~~~~~vi~~~~fG  159 (470)
T 2ij2_A           81 FAGDGLFTSWTHEKNWKKAHNILL-PSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFN  159 (470)
T ss_dssp             HHTTSGGGSCTTSHHHHHHHHHHG-GGGSTTTHHHHHHHHHHHHHHHHHHHHTCCTTCCEEHHHHHHHHHHHHHHHHHHS
T ss_pred             hcCCceEEcCCCchHHHHHHHHhc-cccCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEEHHHHHHHHHHHHHHHHHcC
Confidence            112223332  6789999999997 89999999999999999999999988753 4568999999999999999999999


Q ss_pred             cCCCCCCchHHHHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCc
Q 009821          207 ASLRGEDWDAVAIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSS  286 (524)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~  286 (524)
                      .+++..+.+ ....+...+...+........  ..|++.++. ....+...+..+.+.+++.+.++++++.     ....
T Consensus       160 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~r~~~-----~~~~  230 (470)
T 2ij2_A          160 YRFNSFYRD-QPHPFITSMVRALDEAMNKLQ--RANPDDPAY-DENKRQFQEDIKVMNDLVDKIIADRKAS-----GEQS  230 (470)
T ss_dssp             CCCCGGGCS-SCCHHHHHHHHHHHHHHHTC-----CTTSGGG-HHHHHHHHHHHHHHHHHHHHHHHHHHHH-----CCCC
T ss_pred             CcccccccC-CCCHHHHHHHHHHHHHHHHHh--hhhhHhhcc-chHHHHHHHHHHHHHHHHHHHHHHHHhc-----ccCc
Confidence            988643110 012233333333222111110  012222221 2233455667778888888888877653     2234


Q ss_pred             ccHHHHHHHHhhc-CCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCccccccc
Q 009821          287 KDFLQTLLELQQQ-GDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHL  365 (524)
Q Consensus       287 ~d~l~~ll~~~~~-~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~~l  365 (524)
                      .|+++.|++..++ .+..++++++.+++. .+++||+|||+++++|++++|++||++|+|+|+|++++++. +.++++++
T Consensus       231 ~dll~~ll~~~~~~~~~~ls~~ei~~~~~-~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~-~~~~~~~~  308 (470)
T 2ij2_A          231 DDLLTHMLNGKDPETGEPLDDENIRYQII-TFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVD-PVPSYKQV  308 (470)
T ss_dssp             SSHHHHHHHCCCTTTCCCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCS-SSCCHHHH
T ss_pred             hhHHHHHHhccCcccCCCCCHHHHHHHHH-HHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCC-CCCCHHHH
Confidence            6999999986543 235689999999999 99999999999999999999999999999999999999985 45899999


Q ss_pred             CCChhHHHHHHhhhcCCCCCCCcCccccCCCccccc-eeeCCCCEEEeehhhhccCCCCC-CCCCCCCCCccccccCCCc
Q 009821          366 AKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSG-YTIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLEDVKIGD  443 (524)
Q Consensus       366 ~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g-~~ip~G~~v~~~~~~~h~d~~~~-~dp~~F~PeR~~~~~~~~~  443 (524)
                      .+||||+|||+|+||++|+++. ++|.+.+|++++| |.||+|+.|.++.+++||||++| +||++|||||| .. ..  
T Consensus       309 ~~lpyl~a~i~E~lRl~p~~~~-~~r~~~~d~~~~g~~~Ip~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeR~-~~-~~--  383 (470)
T 2ij2_A          309 KQLKYVGMVLNEALRLWPTAPA-FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-EN-PS--  383 (470)
T ss_dssp             HTCHHHHHHHHHHHHHSCSSCE-EEEEESSCEEETTTEEECTTCEEEEEHHHHTTCHHHHCSCTTSCCGGGG-SS-GG--
T ss_pred             hCCHHHHHHHHHHHhcCCCccc-cceeccCCcccCCceEeCCCCEEEechHHhcCCHhhhCCCccccCcccc-CC-CC--
Confidence            9999999999999999999998 6899999999999 99999999999999999999999 99999999999 21 11  


Q ss_pred             ccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCCCCCcccccccccccCCCceeeeecCCCcccc
Q 009821          444 FRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTKFDLSDKLLMALKKSEPLVVIPTPRSLSALE  521 (524)
Q Consensus       444 ~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~~~~~  521 (524)
                       ..++..|+|||+|+|.|+|++||.+|++++++.|+++|+++ .++ ..+.......+..+. +++|++++|+..+.+
T Consensus       384 -~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~-~~~-~~~~~~~~~~~~~p~-~~~v~~~~R~~~~~~  457 (470)
T 2ij2_A          384 -AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE-DHT-NYELDIKETLTLKPE-GFVVKAKSKKIPLGG  457 (470)
T ss_dssp             -GSCTTSCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEE-CTT-CCCCCEEESSSEEET-TCEEEEEECCCCC--
T ss_pred             -cCCCccccCCCCCCCcCCcHHHHHHHHHHHHHHHHHHeeEe-eCC-CCccccccceEecCC-CeEEEEEEccCCCCC
Confidence             12346799999999999999999999999999999999999 332 222333345566665 899999999865543


No 20 
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=100.00  E-value=3.5e-72  Score=556.60  Aligned_cols=437  Identities=21%  Similarity=0.347  Sum_probs=331.6

Q ss_pred             CCCCCCCCCCceecccccCCCChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccc-cCCCcccchhhh
Q 009821           52 PPLPPGPRALPLVGNILSAEPNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVF-ANRDPSAAASVL  130 (524)
Q Consensus        52 ~~~ppgp~~~p~iG~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~-~~~~~~~~~~~~  130 (524)
                      ..+||||+++|++||++.+..+++.++.++++ ||+||++++|+.++++|+||+.+++++.++  .| .++.........
T Consensus        22 ~eppPgP~~~P~iG~~~~~~~~p~~~~~~l~~-yGpv~~~~~g~~~~~vv~~~~~i~~il~~~--~~~~~~~~~~~~~~~   98 (467)
T 3dbg_A           22 REPPVAGGGVPLLGHGWRLARDPLAFMSQLRD-HGDVVRIKLGPKTVYAVTNPELTGALALNP--DYHIAGPLWESLEGL   98 (467)
T ss_dssp             CBCCEECCCCSTTHHHHHHHHCHHHHHHHHGG-GCSEEEEEETTEEEEEECSHHHHHHHHHCT--TC-------------
T ss_pred             CCCCCCCCCCCcccchHHhccCHHHHHHHHHH-hCCEEEEEeCCccEEEECCHHHHHHHHhCc--CcccccchHHHHHHh
Confidence            45689999999999999887889999999988 999999999999999999999999999887  34 333222111111


Q ss_pred             cc-CCcccccCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHHHHHHhccCC
Q 009821          131 TY-GGKSIGASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVGELMFLTSLDVATRMLWGASL  209 (524)
Q Consensus       131 ~~-~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~  209 (524)
                      .. .+....+|+.|+++|+.+. +.|+...++.+.+.+.++++++++.+..  ++++|+.+.+..+++++++.++||.++
T Consensus        99 ~g~~~l~~~dg~~h~~~R~~l~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~--~~~~d~~~~~~~~~~~vi~~~~~g~~~  175 (467)
T 3dbg_A           99 LGKEGVATANGPLHRRQRRTIQ-PAFRLDAIPAYGPIMEEEAHALTERWQP--GKTVDATSESFRVAVRVAARCLLRGQY  175 (467)
T ss_dssp             -----------------CGGGH-HHHSTTTSTTTHHHHHHHHHHHHHHSCT--TSCEEHHHHHHHHHHHHHHHHHSCSSC
T ss_pred             cCCCCcccCCcHHHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHhcc--CCcCcHHHHHHHHHHHHHHHHHhCCcc
Confidence            11 2223338999999999986 8999999999999999999999999865  678999999999999999999999987


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHhcCCCccccccc--ccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcc
Q 009821          210 RGEDWDAVAIQFREVLEEMFQVLGSGNISDLFPL--LTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSSK  287 (524)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~  287 (524)
                      ...    ....+...+..+......   ...+|+  +.+++ ....++..+..+.+.+++.+.+++++++     .....
T Consensus       176 ~~~----~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~r~~~-----~~~~~  242 (467)
T 3dbg_A          176 MDE----RAERLCVALATVFRGMYR---RMVVPLGPLYRLP-LPANRRFNDALADLHLLVDEIIAERRAS-----GQKPD  242 (467)
T ss_dssp             CHH----HHHHHHHHHHHHHHC----------------------------CCHHHHHHHHHHHHHHHTTC-----CSSCC
T ss_pred             cch----hHHHHHHHHHHHHHHHHH---HhccchhhhhhCC-ChHhHHHHHHHHHHHHHHHHHHHHHHhc-----CCCch
Confidence            642    224444544444432211   122332  22221 1223455667778888888888887654     23457


Q ss_pred             cHHHHHHHHhhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcccccccCC
Q 009821          288 DFLQTLLELQQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAK  367 (524)
Q Consensus       288 d~l~~ll~~~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~~l~~  367 (524)
                      |+++.+++..++++..++++++.++++ .+++||+|||+++++|++++|++||++|+|||+|++++++. +.++.+++.+
T Consensus       243 dll~~ll~~~~~~~~~ls~~ei~~~~~-~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~-~~~~~~~l~~  320 (467)
T 3dbg_A          243 DLLTALLEAKDDNGDPIGEQEIHDQVV-AILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTGG-RPVAFEDVRK  320 (467)
T ss_dssp             SHHHHHTTC--------CHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTT-SCCCHHHHTT
T ss_pred             HHHHHHHhhccCCCCCCCHHHHHHHHH-HHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC-CCCCHHHHhh
Confidence            999999987655445689999999998 99999999999999999999999999999999999999984 7789999999


Q ss_pred             ChhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCcccCC
Q 009821          368 LPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGDFRGN  447 (524)
Q Consensus       368 lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~~~~  447 (524)
                      |||++|||+|+||++|+++. ++|.+.+|++++||.||||+.|.++.+++||||++|+||++||||||++++..   ...
T Consensus       321 l~yl~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~---~~~  396 (467)
T 3dbg_A          321 LRHTGNVIVEAMRLRPAVWV-LTRRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPERAA---NVP  396 (467)
T ss_dssp             CHHHHHHHHHHHHHSCSCCC-EEEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCTTTTCCCGGGGSHHHHT---TSC
T ss_pred             CHHHHHHHHHHhhcCCCccc-cceeeCCCccCCCEEECCCCEEEEChHHhcCCchhcCCccccCCccCCCCccc---cCC
Confidence            99999999999999999987 78999999999999999999999999999999999999999999999965422   224


Q ss_pred             ccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCCCCCcccccccccccCCCceeeeecCC
Q 009821          448 NFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTKFDLSDKLLMALKKSEPLVVIPTPRS  516 (524)
Q Consensus       448 ~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  516 (524)
                      +..|+|||+|+|.|||++||.+|++++++.|+++|++++.++.+..  ...+.+..| .+++++.+.|.
T Consensus       397 ~~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~--~~~~~~~~p-~~l~~~~~~~~  462 (467)
T 3dbg_A          397 KYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRFEQVAGSNDA--VRVGITLRP-HDLLVRPVARH  462 (467)
T ss_dssp             TTSCCSSCSSSSSCTTHHHHHHHHHHHHHHHHHHEEEEECTTCEEE--EEESSSEEE-EECEEEEEECC
T ss_pred             CccccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceeEeCCCCCCc--cceeeEecC-CCCccchhhhh
Confidence            5679999999999999999999999999999999999998775433  344566666 46888887775


No 21 
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=100.00  E-value=1.1e-71  Score=552.63  Aligned_cols=439  Identities=20%  Similarity=0.335  Sum_probs=348.9

Q ss_pred             CCCCCCCC-CCCCceecccccCCCChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCccc-ch
Q 009821           50 STPPLPPG-PRALPLVGNILSAEPNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSA-AA  127 (524)
Q Consensus        50 ~~~~~ppg-p~~~p~iG~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~-~~  127 (524)
                      ...+.||| |+++|++||++.+..+++.++.+++++||+||++++++.+.++|++|+.+++++.++...+..+.... ..
T Consensus         8 ~~~~~PPg~P~~lP~iG~l~~~~~~~~~~~~~~~~~yG~v~~l~l~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~~~~   87 (461)
T 3i3k_A            8 AGVKSPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLT   87 (461)
T ss_dssp             --CCCCCBCCCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCccccHHhhccCHHHHHHHHHHHhCCEEEEEecCceEEEEeChHHHHHHHhccccccccchHHHHhh
Confidence            45567998 89999999999888889999999999999999999999999999999999999988765554432221 11


Q ss_pred             hhhccCCcccc-cCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHHHHHHhc
Q 009821          128 SVLTYGGKSIG-ASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVGELMFLTSLDVATRMLWG  206 (524)
Q Consensus       128 ~~~~~~~~~~~-~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~dvi~~~~fG  206 (524)
                      ....+.+.... +|+.|+.+|+.+. +.|+...++.+.+.+.+++.++++.+..  +..+|+.+.+..++++++++++||
T Consensus        88 ~~~~g~g~~~~~~g~~w~~~Rr~~~-~~f~~~~l~~~~~~~~~~~~~ll~~l~~--~~~~dl~~~~~~~~~~~~~~~~~G  164 (461)
T 3i3k_A           88 TPVFGKGVAYDVPNPVFLEQKKMLK-SGLNIAHFKQHVSIIEKETKEYFESWGE--SGEKNVFEALSELIILTASHCLHG  164 (461)
T ss_dssp             HHHHCTTSGGGSCHHHHHHHHHHHH-HHSSHHHHHHHHHHHHHHHHHHGGGGCS--EEEEEHHHHHHHHHHHHHHHHHTC
T ss_pred             hhhcCCeeeeCCCcHHHHHHHHHHh-hhhCHHHHHHHHHHHHHHHHHHHHHhhh--cCCcCHHHHHHHHHHHHHHHHHcc
Confidence            11222233333 6789999999987 7899999999999999999999988864  446899999999999999999999


Q ss_pred             cCCCCCCchHHHHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCc
Q 009821          207 ASLRGEDWDAVAIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSS  286 (524)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~  286 (524)
                      .++.....+    .+...+..+....  ......+|.  +++ ....++..+..+.+.+++.+.+++++++     .+..
T Consensus       165 ~~~~~~~~~----~~~~~~~~~~~~~--~~~~~~~P~--~l~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~~  230 (461)
T 3i3k_A          165 KEIRSQLNE----KVAQLYADLDGGF--SHAAWLLPG--WLP-LPSFRRRDRAHREIKDIFYKAIQKRRQS-----QEKI  230 (461)
T ss_dssp             HHHHHTCCH----HHHHHHHHHHTTS--SHHHHHSCT--TSC-CHHHHHHHHHHHHHHHHHHHHHHHHTTC-----CCCC
T ss_pred             HhhhhHHHH----HHHHHHHHHHhcc--ccchhhccc--ccC-CHHHHHHHHHHHHHHHHHHHHHHHHHhc-----cccc
Confidence            876543321    2222222221110  001112221  121 1234556677888889999999887654     2345


Q ss_pred             ccHHHHHHHHhhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCC-Cccccccc
Q 009821          287 KDFLQTLLELQQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARD-SVVEEFHL  365 (524)
Q Consensus       287 ~d~l~~ll~~~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~-~~~~~~~l  365 (524)
                      .|+++.+++...+++..++++++.++++ .+++||+|||+++++|++++|++||++|+|+|+|++++++.+ ..++.+++
T Consensus       231 ~d~l~~ll~~~~~~~~~l~~~~i~~~~~-~l~~ag~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~  309 (461)
T 3i3k_A          231 DDILQTLLDATYKDGRPLTDDEVAGMLI-GLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQL  309 (461)
T ss_dssp             CSHHHHHHTCBCTTSCBCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCTTCCCCCHHHH
T ss_pred             ccHHHHHHHhhhccCCCCCHHHHHHHHH-HHHhhccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCCCCCCCHHHH
Confidence            7999999987655556699999999998 999999999999999999999999999999999999999865 34588999


Q ss_pred             CCChhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCccc
Q 009821          366 AKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGDFR  445 (524)
Q Consensus       366 ~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~~  445 (524)
                      .+|||++|||+|+||++|+++. ++|.+.+|++++||.||||+.|.++.+++||||++|+||++||||||++.+..   .
T Consensus       310 ~~l~~l~a~i~E~lRl~p~~~~-~~r~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~---~  385 (461)
T 3i3k_A          310 KDLNLLDRCIKETLRLRPPIMI-MMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNPA---S  385 (461)
T ss_dssp             HTCHHHHHHHHHHHHHSCSCCC-EEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTCCCGGGGGSCCHH---H
T ss_pred             hcChHHHHHHHHHHhcCCCccc-cccccCCCccCCCEEECCCCEEEEChHHhcCCcccCCCcccCCCCCCCCCCCC---C
Confidence            9999999999999999999976 78999999999999999999999999999999999999999999999965321   1


Q ss_pred             CCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCCCCCcccccccccccCCCceee
Q 009821          446 GNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTKFDLSDKLLMALKKSEPLVVI  511 (524)
Q Consensus       446 ~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  511 (524)
                      ..+..|+|||+|+|.|||++||.+|++++++.|+++||+++++|...+. .....+..+..++.+.
T Consensus       386 ~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~-~~~~~~~~p~~~~~~~  450 (461)
T 3i3k_A          386 GEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFPTV-NYTTMIHTPENPVIRY  450 (461)
T ss_dssp             HSSSSSCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTCCCCB-CCSSSSCCBSSCEEEE
T ss_pred             CCCcceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeEEeCCCCCCCc-ccceeecCCCCceEEe
Confidence            2346799999999999999999999999999999999999988743332 2334555666665554


No 22 
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=100.00  E-value=8.9e-71  Score=545.58  Aligned_cols=427  Identities=20%  Similarity=0.343  Sum_probs=337.0

Q ss_pred             CCChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCcccc--hhhh----ccCCcccc-cCCch
Q 009821           71 EPNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAA--ASVL----TYGGKSIG-ASPEW  143 (524)
Q Consensus        71 ~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~--~~~~----~~~~~~~~-~~~~w  143 (524)
                      |..++..+.+|+++||+||++++|+.++|+|+||+.+++++.++.  +.+++....  ...+    ...+.... +|+.|
T Consensus         9 g~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~il~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w   86 (456)
T 3mdm_A            9 GRVLQDVFLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMSTK--YNKDSKMYRALQTVFGERLFGQGLVSECNYERW   86 (456)
T ss_dssp             CCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTCTT--SCCCHHHHHHHHEETTEESSTTSTTTCCCHHHH
T ss_pred             cchHHHHHHHHHHHhCCeEEEEeCCCCEEEECCHHHHHHHHhhcc--ccccchhHHHHHHhhcccccCCCcccCCChHHH
Confidence            456789999999999999999999999999999999999997532  333322111  0001    11122222 78899


Q ss_pred             HHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhcc--CCCceehhHHHHHHHHHHHHHHHhccCCCCCCchHHHHHH
Q 009821          144 PKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGR--VGSPIKVGELMFLTSLDVATRMLWGASLRGEDWDAVAIQF  221 (524)
Q Consensus       144 ~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~--~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~  221 (524)
                      +++|+.+. +.|+...++.+.+.+.++++++++.+...  ++.++|+.+++..+++|++++++||.+++.....  ...+
T Consensus        87 ~~~Rr~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~--~~~~  163 (456)
T 3mdm_A           87 HKQRRVID-LAFSRSSLVSLMETFNEKAEQLVEILEAKADGQTPVSMQDMLTYTAMDILAKAAFGMETSMLLGA--QKPL  163 (456)
T ss_dssp             HHHHHHHG-GGGSHHHHHTTHHHHHHHHHHHHHHHHHTCSSSSCEEHHHHHHHHHHHHHHHHHHSCCCCGGGTC--CHHH
T ss_pred             HHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeHHHHHHHHHHHHHHHHHcCCChhhhccc--ccHH
Confidence            99999997 89999999999999999999999998764  4578999999999999999999999998754321  1223


Q ss_pred             HHHHHHHHHHhcCCCcccccccccccCc-cchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcccHHHHHHHHhhcC
Q 009821          222 REVLEEMFQVLGSGNISDLFPLLTRFDL-QGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSSKDFLQTLLELQQQG  300 (524)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~p~l~~~~~-~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~  300 (524)
                      ...+..+.......    ..+++.+++. ....+...+..+.+.+++.+.++++++... .+.....|+++.+++...  
T Consensus       164 ~~~~~~~~~~~~~~----~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~-~~~~~~~d~l~~ll~~~~--  236 (456)
T 3mdm_A          164 SQAVKLMLEGITAS----RNTLAKFLPGKRKQLREVRESIRFLRQVGRDWVQRRREALK-RGEEVPADILTQILKAEE--  236 (456)
T ss_dssp             HHHHHHHHHHHHHH----HHSCGGGCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCCCCCCHHHHHHHHTS--
T ss_pred             HHHHHHHHHHHHHH----HHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccccchhhHHHHHHHhcC--
Confidence            33333332221110    0112222211 112244556666777777777777654322 112345799999998652  


Q ss_pred             CCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcccccccCCChhHHHHHHhhhc
Q 009821          301 DYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLPYLEAIVKETLR  380 (524)
Q Consensus       301 ~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lR  380 (524)
                       ..++++++.+++. .+++||+|||+++++|++++|++||++|+|+|+|++++++.++.++.+++.+||||+|||+|+||
T Consensus       237 -~~~~~~~l~~~~~-~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lR  314 (456)
T 3mdm_A          237 -GAQDDEGLLDNFV-TFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQYLSQVLKESLR  314 (456)
T ss_dssp             -SCSSSHHHHHHHH-HHHHHTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCSSCCHHHHHHCHHHHHHHHHHHH
T ss_pred             -CCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHcCCCCCCCHHHHhcCHHHHHHHHHHHH
Confidence             3578889999988 99999999999999999999999999999999999999998888999999999999999999999


Q ss_pred             CCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCcccCCccceeecCCCCCC
Q 009821          381 LHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGDFRGNNFNYLPFGSGRRI  460 (524)
Q Consensus       381 l~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~~~~~~~~~pFg~G~r~  460 (524)
                      ++|+++. +.|.+.+|++++||.||||+.|.++.+++||||++|+||++||||||+++.     ......|+|||+|+|.
T Consensus       315 l~p~~~~-~~r~~~~d~~i~g~~Ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeRfl~~~-----~~~~~~~~pFg~G~r~  388 (456)
T 3mdm_A          315 LYPPAWG-TFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGA-----PKPRFTYFPFSLGHRS  388 (456)
T ss_dssp             HCCSSCC-EEEEECSCEEETTEEECSSEEEEECHHHHHTCTTTSSSTTSCCGGGGSTTS-----CCCSSSCCTTCCGGGS
T ss_pred             hCCCccc-cccccCCceeECCEEECCCCEEEeehHHhcCCchhcCCccccCccccCCCC-----CCCCCcccCCCCCCcC
Confidence            9999997 679999999999999999999999999999999999999999999999653     1234679999999999


Q ss_pred             CCCHHHHHHHHHHHHHHHhhhceeeCCCCCCCCcccccccccccCCCceeeeecCCCcc
Q 009821          461 CPGIPLAEKIVPHVLANLLHLFEWSLPEGTKFDLSDKLLMALKKSEPLVVIPTPRSLSA  519 (524)
Q Consensus       461 C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~~~  519 (524)
                      |||++||.+|++++++.|+++|++++.++.+++...  ..+..++.++++++++|+.+.
T Consensus       389 C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~--~~~~~p~~~~~~~~~~r~~~~  445 (456)
T 3mdm_A          389 CIGQQFAQMEVKVVMAKLLQRLEFRLVPGQRFGLQE--QATLKPLDPVLCTLRPRGWQP  445 (456)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHEEEEECTTCCCCEEE--SSSEEESSCCEEEEEECCC--
T ss_pred             CCCHHHHHHHHHHHHHHHHHhCeEEeCCCCcceeec--ceEEecCCCeEEEEEEcCCCC
Confidence            999999999999999999999999998876555433  456677888999999998654


No 23 
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=100.00  E-value=2.8e-68  Score=533.02  Aligned_cols=445  Identities=19%  Similarity=0.262  Sum_probs=324.3

Q ss_pred             CCCCCCCCCCC-CceecccccCCCChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccc-cccCCCcccch
Q 009821           50 STPPLPPGPRA-LPLVGNILSAEPNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDV-VFANRDPSAAA  127 (524)
Q Consensus        50 ~~~~~ppgp~~-~p~iG~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~-~~~~~~~~~~~  127 (524)
                      .....||||++ +|++||++.+..+++.++.+++++||+||++++|+.++++|+||+.++++++++.. .+.........
T Consensus        10 ~~~~~pPgp~~~~P~iG~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~~~~il~~~~~~~~~~~~~~~~~   89 (491)
T 3dax_A           10 RQTGEPPLENGLIPYLGCALQFGANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKFHFATSA   89 (491)
T ss_dssp             CCTTCCCEEEEEESCTTTTGGGTCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGTHHHHSCCTTEESSHHHHHHHH
T ss_pred             cCCCCCCcCCCcccchhhHHHHhhCHHHHHHHHHHhcCCeEEEEECCeEEEEEcChHHHHHHHcCCccCChHHHHHHHHH
Confidence            34567899887 89999999988889999999999999999999999999999999999999977652 22221111111


Q ss_pred             hhhccCCcc-cccCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhcc-----CCCceehhHHHHHHHHHHHH
Q 009821          128 SVLTYGGKS-IGASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGR-----VGSPIKVGELMFLTSLDVAT  201 (524)
Q Consensus       128 ~~~~~~~~~-~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~-----~~~~vd~~~~~~~~~~dvi~  201 (524)
                      ..++. +.. ..+++.|+++|+.+. +.|+...++.+.+.+.+.+.+.++.....     .+..+++...+..+++++++
T Consensus        90 ~~~g~-~~~~~~~g~~w~~~r~~~~-~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~  167 (491)
T 3dax_A           90 KAFGH-RSIDPMDGNTTENINDTFI-KTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVMFEAGY  167 (491)
T ss_dssp             HHHTC-CCCCGGGTSBCCCHHHHHH-HHHSHHHHHHHHHHHHHHHHHHHC----------CCEEEEHHHHHHHHHHHHHH
T ss_pred             HHcCC-CcccccchhHHHHHHHHHH-HhcCcccHHHHHHHHHHHHHHHHHhhccCCcCCCCceeccHHHHHHHHHHHHhH
Confidence            12222 222 337889999999886 67888888888888777777766544321     23458899999999999999


Q ss_pred             HHHhccCCCCCCchHHHHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCC
Q 009821          202 RMLWGASLRGEDWDAVAIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMN  281 (524)
Q Consensus       202 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~  281 (524)
                      .++||.++...+.  ....+......+..      +...+|.+.+..+....+...+..+.+.+.+.   +++.++    
T Consensus       168 ~~~fG~~~~~~~~--~~~~~~~~~~~~~~------~~~~~p~l~~~lp~~~~~~~~~~~~~~~~~~~---~~~~~~----  232 (491)
T 3dax_A          168 LTIFGRDLTRRDT--QKAHILNNLDNFKQ------FDKVFPALVAGLPIHMFRTAHNAREKLAESLR---HENLQK----  232 (491)
T ss_dssp             HHHHCBCSTTGGG--HHHHHHHHHHHHHH------HHHHHHHHHTTCCGGGSHHHHHHHHHHHHHTS---HHHHTT----
T ss_pred             HHHcCcccccccc--hhhhhhHHHHHHHH------HHHHhHHHHHhCCHhhhhHHHHHHHHHHHHHH---HHHhhc----
Confidence            9999988754321  11111122221111      11234433221111222344444444433321   122211    


Q ss_pred             CCCCcccHHHHHHHHhhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCC---
Q 009821          282 EGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDS---  358 (524)
Q Consensus       282 ~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~---  358 (524)
                       .....|+++.+++..++. ..++++++.++++ .+++||+|||+++++|++++|++||++|+|+|+||+++++.++   
T Consensus       233 -~~~~~d~l~~ll~~~~~~-~~~~~~~i~~~~~-~~~~ag~~tta~tl~~~l~~L~~~P~~~~kl~~Ei~~v~~~~~~~~  309 (491)
T 3dax_A          233 -RESISELISLRMFLNDTL-STFDDLEKAKTHL-VVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKV  309 (491)
T ss_dssp             -CBSCCHHHHHHHHHHHHH-BCCCHHHHHHHHH-HHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHTTTCCC
T ss_pred             -ccchhHHHHHHHHHHHhc-CCChHHHHHHHHH-HHHHHhccchHHHHHHHHHHHHcCHHHHHHHHHHHHHHhhcccccc
Confidence             123468999888765432 2478888888888 8899999999999999999999999999999999999997543   


Q ss_pred             -------cccccccCCChhHHHHHHhhhcCCCCCCCcCccccCCCccc----cceeeCCCCEEEeehhhhccCCCCCCCC
Q 009821          359 -------VVEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNL----SGYTIPKGSTIFINAWAIQRNPEVWENP  427 (524)
Q Consensus       359 -------~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~----~g~~ip~G~~v~~~~~~~h~d~~~~~dp  427 (524)
                             .++.+++.+||||+|||+||||++|+ +. ++|.+.+|+++    +||.||||+.|.++.+++||||++|+||
T Consensus       310 ~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~-~~-~~R~~~~d~~l~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp  387 (491)
T 3dax_A          310 SLEGNPICLSQAELNDLPVLDSIIKESLRLSSA-SL-NIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDP  387 (491)
T ss_dssp             CSSSCCCCCCHHHHHCCHHHHHHHHHHHHHHEE-EC-EEEEESSSEEEEETTEEEEECTTCEEEECTHHHHTCTTTSSST
T ss_pred             ccCCCccccCHHHHhcCHHHHHHHHHHHhcCCC-cc-ceeEecCCeEeecCCCcEEeCCCCEEEechHhhcCCcccCCCH
Confidence                   35889999999999999999999975 55 68999999998    7899999999999999999999999999


Q ss_pred             CCCCCCccccccCCCc------ccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCC--CCCccc-cc
Q 009821          428 QDFQPDRFLEDVKIGD------FRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGT--KFDLSD-KL  498 (524)
Q Consensus       428 ~~F~PeR~~~~~~~~~------~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~--~~~~~~-~~  498 (524)
                      ++||||||+++++...      ....+..|+|||+|+|+|||++||.+|++++++.|+++||+++.++.  ..+... ..
T Consensus       388 ~~F~PeRfl~~~~~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~  467 (491)
T 3dax_A          388 LTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQAKCPPLDQSRA  467 (491)
T ss_dssp             TSCCTTTTBCTTSSBCCCCEETTEECSCSCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEETTTTCCCCCBCGGGT
T ss_pred             HHcCCccccCCCccccccccccCcCCccccccCCCCCCCCCcHHHHHHHHHHHHHHHHHHeeEEEccCCCCCCCCCcccc
Confidence            9999999996432210      01134679999999999999999999999999999999999988763  222222 12


Q ss_pred             c-cccccCCCceeeeecCC
Q 009821          499 L-MALKKSEPLVVIPTPRS  516 (524)
Q Consensus       499 ~-~~~~~~~~~~v~~~~r~  516 (524)
                      + .+..++.+++|+++...
T Consensus       468 ~~~~~~p~~~~~~~~r~~~  486 (491)
T 3dax_A          468 GLGILPPLNDIEFKYKFKH  486 (491)
T ss_dssp             BEEECCBSSCCEEEEEECC
T ss_pred             cccccCCCCCceEEEEecc
Confidence            3 24566777888877654


No 24 
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=100.00  E-value=1.4e-68  Score=534.42  Aligned_cols=444  Identities=20%  Similarity=0.258  Sum_probs=343.7

Q ss_pred             CCCCCCCCCCC-CceecccccCCCChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccc-cccCCCcccch
Q 009821           50 STPPLPPGPRA-LPLVGNILSAEPNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDV-VFANRDPSAAA  127 (524)
Q Consensus        50 ~~~~~ppgp~~-~p~iG~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~-~~~~~~~~~~~  127 (524)
                      ...+.||||++ +|++||++.+..+++.++.+++++||+||++++|+.++++|+||+.+++++++++. .+..+......
T Consensus        10 ~~~~~PPgp~~~lPliG~~~~~~~~p~~~~~~l~~~yGpv~~~~lg~~~~vvv~~p~~v~~vl~~~~~~~~~~~~~~~~~   89 (491)
T 3v8d_A           10 RQTGEPPLENGLIPYLGCALQFGANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKFHFALSA   89 (491)
T ss_dssp             CCTTSCCEEEEEESSTTTTGGGTCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHSCCTTEESSHHHHHHHH
T ss_pred             cCCCCCCCCCCCcceeccHHHHhcCHHHHHHHHHHHcCCceEEEECCEEEEEEcCHHHHHHHHhcCCccchHHHHHHHHH
Confidence            45568999998 79999999999999999999999999999999999999999999999999977652 23332222222


Q ss_pred             hhhccCCcccccCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhcc-----CCCceehhHHHHHHHHHHHHH
Q 009821          128 SVLTYGGKSIGASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGR-----VGSPIKVGELMFLTSLDVATR  202 (524)
Q Consensus       128 ~~~~~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~-----~~~~vd~~~~~~~~~~dvi~~  202 (524)
                      ..++.+.....+|+.|+++|+.+. +.|+...++.+.+.+.+++.++++.+...     .+..+++.+++..+++++++.
T Consensus        90 ~~~g~~~~~~~~g~~~~~~Rr~~~-~~f~~~~l~~~~~~i~~~~~~ll~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  168 (491)
T 3v8d_A           90 KAFGHRSIDPMDGNTTENINDTFI-KTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVMFEAGYL  168 (491)
T ss_dssp             HHHTCCCCCGGGSSBCCCHHHHHH-HHHSHHHHHHHHHHHHHHHHHHHSCCSSCGGGGCSCEEEEHHHHHHHHHHHHHHH
T ss_pred             HhcCCcccccccchhHHHHHHHHH-HHcCccchHHHHHHHHHHHHHHHHhhhhcccCCCCCcccCHHHHHHHHHHHHHHH
Confidence            333333333348899999999876 88999999999999999999988755322     245689999999999999999


Q ss_pred             HHhccCCCCCCchHHHHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCC
Q 009821          203 MLWGASLRGEDWDAVAIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNE  282 (524)
Q Consensus       203 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~  282 (524)
                      .+||.++...+.  ....+.+.++.+...      ...+|.+.........++..++++.+.+++.+.++++++      
T Consensus       169 ~~fG~~~~~~~~--~~~~~~~~~~~~~~~------~~~~~~l~~~~p~~~~~~~~~a~~~l~~~~~~~~~~~~~------  234 (491)
T 3v8d_A          169 TIFGRDLTRRDT--QKAHILNNLDNFKQF------DKVFPALVAGLPIHMFRTAHNAREKLAESLRHENLQKRE------  234 (491)
T ss_dssp             HHHCBCCSCGGG--HHHHHHHHHHHHHHH------HHHHHHHHTTCCGGGCHHHHHHHHHHHHHTSHHHHTTCB------
T ss_pred             HHcCccccccch--hhhhhHHHHHHHHHH------HHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHhccc------
Confidence            999998764332  223333333333211      122333322222334466677777777777666655432      


Q ss_pred             CCCcccHHHHHHHHhhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCC-----
Q 009821          283 GKSSKDFLQTLLELQQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARD-----  357 (524)
Q Consensus       283 ~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~-----  357 (524)
                        ...|+++.++...++. ..++++++..+++ .+++||+|||+++++|++++|++||++|+|+|+|++++++.+     
T Consensus       235 --~~~d~l~~l~~~~~~~-~~~~~~ei~~~~~-~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~  310 (491)
T 3v8d_A          235 --SISELISLRMFLNDTL-STFDDLEKAKTHL-VVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVS  310 (491)
T ss_dssp             --SCCHHHHHHHHHHHHH-BCCCHHHHHHHHH-HHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred             --cccHHHHHHHHHhhcc-CCCchHHHHHHHH-HHHHHhHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHhhccccccc
Confidence              2368999998766543 3588999999998 999999999999999999999999999999999999998653     


Q ss_pred             -----CcccccccCCChhHHHHHHhhhcCCCCCCCcCccccCCCccc----cceeeCCCCEEEeehhhhccCCCCCCCCC
Q 009821          358 -----SVVEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNL----SGYTIPKGSTIFINAWAIQRNPEVWENPQ  428 (524)
Q Consensus       358 -----~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~----~g~~ip~G~~v~~~~~~~h~d~~~~~dp~  428 (524)
                           ..++.+++.+||||+|||+|+||++|+ +. ++|.+.+|+++    +||.||+|+.|.++.+++||||++|+||+
T Consensus       311 ~~~~~~~~~~~~l~~~~~l~a~i~E~lRl~p~-~~-~~R~~~~d~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~  388 (491)
T 3v8d_A          311 LEGNPICLSQAELNDLPVLDSIIKESLRLSSA-SL-NIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPL  388 (491)
T ss_dssp             SSSSCCCCCHHHHHCCHHHHHHHHHHHHHHEE-EC-EEEEESSSEEEECSSCEEEECTTCEEEECTHHHHTCTTTSSSTT
T ss_pred             cccccccCCHHHHhcChHHHHHHHHHhhcCCC-Cc-cceeccCCeeEeecCCcEEeCCCCEEEecchhhcCCcccCCCcc
Confidence                 356788899999999999999999974 44 57999999999    99999999999999999999999999999


Q ss_pred             CCCCCccccccCCCc------ccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCC-C-CCcc--ccc
Q 009821          429 DFQPDRFLEDVKIGD------FRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGT-K-FDLS--DKL  498 (524)
Q Consensus       429 ~F~PeR~~~~~~~~~------~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~-~-~~~~--~~~  498 (524)
                      +||||||++.++...      ....+..|+|||+|+|.|||++||.+|++++++.|+++||++++++. + .+.+  ...
T Consensus       389 ~F~p~R~~~~~~~~~~~~~~~~~~~~~~~~~FG~G~~~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~  468 (491)
T 3v8d_A          389 TFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQAKCPPLDQSRAG  468 (491)
T ss_dssp             SCCTTTTBCTTSSBCCCCEETTEECSCCCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEEC---CCCCCBCGGGTB
T ss_pred             ccCcccccCCCCCcccccccccccCCCcccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceEEeCCCCCCCCCCCcccCc
Confidence            999999996543211      01134679999999999999999999999999999999999998772 2 2222  222


Q ss_pred             ccccccCCCceeeeec
Q 009821          499 LMALKKSEPLVVIPTP  514 (524)
Q Consensus       499 ~~~~~~~~~~~v~~~~  514 (524)
                      ..++.|+.+++|+++=
T Consensus       469 ~~~~~p~~~i~v~~~~  484 (491)
T 3v8d_A          469 LGILPPLNDIEFKYKF  484 (491)
T ss_dssp             EEECCBSSCCEEEEEE
T ss_pred             CcccCCCCCeEEEEEe
Confidence            3456677788887763


No 25 
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=100.00  E-value=4.5e-66  Score=517.56  Aligned_cols=447  Identities=16%  Similarity=0.222  Sum_probs=317.8

Q ss_pred             CCCCCCCCCCC-CceecccccCCCChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCcc--cc
Q 009821           50 STPPLPPGPRA-LPLVGNILSAEPNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPS--AA  126 (524)
Q Consensus        50 ~~~~~ppgp~~-~p~iG~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~--~~  126 (524)
                      ...+.||||++ +|++||++.+..+++.++.+++++||+||++++|+.++++++||+++++++.++...+..+...  ..
T Consensus        15 ~~~~~PPgp~~~~P~iG~~~~~~~~~~~~~~~l~~kYG~i~~v~lg~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~   94 (498)
T 3b6h_A           15 RRPGEPPLDLGSIPWLGYALDFGKDAASFLTRMKEKHGDIFTILVGGRYVTVLLDPHSYDAVVWEPRTRLDFHAYAIFLM   94 (498)
T ss_dssp             CCTTCCCEECCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHTCCTTTEECCHHHHHHH
T ss_pred             cCCCCCCCCCCCCcchhhHHHhccCHHHHHHHHHHHcCCeEEEEECCeeEEEEcCHHHHHHHHhCccccCCchhhHHHHH
Confidence            34567899988 8999999888777899999999999999999999999999999999999998765322222211  11


Q ss_pred             hhhhccCCcccccCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhcc---CCCceehhHHHHHHHHHHHHHH
Q 009821          127 ASVLTYGGKSIGASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGR---VGSPIKVGELMFLTSLDVATRM  203 (524)
Q Consensus       127 ~~~~~~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~---~~~~vd~~~~~~~~~~dvi~~~  203 (524)
                      ...++ .+....+++.|   |+.+. +.|+...++.+.+.+.+++.+.++.....   .+..+++...+..+++++++.+
T Consensus        95 ~~~~g-~~~~~~~~~~~---rr~~~-~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~vi~~~~~~~  169 (498)
T 3b6h_A           95 ERIFD-VQLPHYSPSDE---KARMK-LTLLHRELQALTEAMYTNLHAVLLGDATEAGSGWHEMGLLDFSYSFLLRAGYLT  169 (498)
T ss_dssp             HHTSC-CCCTTCCHHHH---HHHHH-TTSSHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCEEEEHHHHHHHHHHHHHHHH
T ss_pred             HHHcC-CCccccCHHHH---HHHHH-HhhchHhHHHHHHHHHHHHHHHHhhcccccCCCcceecHHHHHHHHHHHHHHHh
Confidence            11111 11111244444   44443 67888888888777777777666654321   2345889999999999999999


Q ss_pred             HhccCCCCCCchHHHHHHHHHHHHHHHHhcCCCcccccccccc-cCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCC
Q 009821          204 LWGASLRGEDWDAVAIQFREVLEEMFQVLGSGNISDLFPLLTR-FDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNE  282 (524)
Q Consensus       204 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~-~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~  282 (524)
                      +||.+++..+.. ....+...+.++...+.  .+...+|++.+ +......+...+..+.+.+.+   ++++.++     
T Consensus       170 ~fG~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-----  238 (498)
T 3b6h_A          170 LYGIEALPRTHE-SQAQDRVHSADVFHTFR--QLDRLLPKLARGSLSVGDKDHMCSVKSRLWKLL---SPARLAR-----  238 (498)
T ss_dssp             HHCBSCSSCCHH-HHHHHHHHHHHHHHHHH--HHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHT---CHHHHTT-----
T ss_pred             hcCccccccccc-chhhHHHhhHHHHHHHH--HHHhhHHHHHHHhcCchhhHHHHHHHHHHHHHH---HHHHHhc-----
Confidence            999988554321 11112222222222111  11234453322 111112233444444443322   2222221     


Q ss_pred             CCCcccHHHHHHHHhhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCc---
Q 009821          283 GKSSKDFLQTLLELQQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSV---  359 (524)
Q Consensus       283 ~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~---  359 (524)
                      .....|+++.+++..++.+ .++++++. +++ .+++||+|||+++++|++++|++||++|+|+|+|++++++.++.   
T Consensus       239 ~~~~~d~l~~ll~~~~~~~-~~~~~~~~-~~~-~~l~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~~~~~~~~  315 (498)
T 3b6h_A          239 RAHRSKWLESYLLHLEEMG-VSEEMQAR-ALV-LQLWATQGNMGPAAFWLLLFLLKNPEALAAVRGELESILWQAEQPVS  315 (498)
T ss_dssp             CBSCCHHHHHHHHHHHHTT-CCHHHHHH-HHH-HHHHHHHTTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHC------
T ss_pred             cccHHHHHHHHHHHHHhCC-CCHHHHHH-HHH-HHHHHhhhchHHHHHHHHHHHHcCHHHHHHHHHHHHHHhcccCCCCC
Confidence            1234699999997765433 46777776 666 78889999999999999999999999999999999999986542   


Q ss_pred             ----ccccccCCChhHHHHHHhhhcCCCCCCCcCccccCCCccc-----cceeeCCCCEEEeehhh-hccCCCCCCCCCC
Q 009821          360 ----VEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNL-----SGYTIPKGSTIFINAWA-IQRNPEVWENPQD  429 (524)
Q Consensus       360 ----~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~-----~g~~ip~G~~v~~~~~~-~h~d~~~~~dp~~  429 (524)
                          ++.+++.+||||+|||+|+||++|+ +. ++|.+.+|+++     +||.||||+.|.++.++ +||||++|+||++
T Consensus       316 ~~~~~~~~~l~~lpyl~a~i~E~lRl~p~-~~-~~R~~~~d~~~~~~~g~g~~ip~Gt~v~~~~~~~~~~d~~~~~~p~~  393 (498)
T 3b6h_A          316 QTTTLPQKVLDSTPVLDSVLSESLRLTAA-PF-ITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEV  393 (498)
T ss_dssp             ----CCTHHHHSCHHHHHHHHHHHHHHBC-BC-EEEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCTCTTTSSSTTS
T ss_pred             cccccCHHHHhcCHHHHHHHHHHHhccCC-Cc-ceeeecCCeeeecCCCCeEEeCCCCEEEeCchHhhcCCccccCChhh
Confidence                5889999999999999999999975 55 68999999988     68999999999999999 9999999999999


Q ss_pred             CCCCccccccCCCc------ccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCC--CCCccc--ccc
Q 009821          430 FQPDRFLEDVKIGD------FRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGT--KFDLSD--KLL  499 (524)
Q Consensus       430 F~PeR~~~~~~~~~------~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~--~~~~~~--~~~  499 (524)
                      ||||||++.++...      ....+..|+|||+|+|.|||++||.+|++++++.|+++||++++++.  ..+...  ...
T Consensus       394 F~PeRfl~~~~~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~  473 (498)
T 3b6h_A          394 FKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLELINADVEIPEFDLSRYGF  473 (498)
T ss_dssp             CCTTTTBCTTSSBCCCCEETTEECSCSCCTTEETTEECSSHHHHHHHHHHHHHHHHHTEEEEESSTTCCCCCBCGGGTBS
T ss_pred             cCcccccCCCcccccccccccccCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHHceeEeCCCCCCCCCCCcccccc
Confidence            99999996432110      01124679999999999999999999999999999999999987763  222221  222


Q ss_pred             cccccCCCceeeeecCCC
Q 009821          500 MALKKSEPLVVIPTPRSL  517 (524)
Q Consensus       500 ~~~~~~~~~~v~~~~r~~  517 (524)
                      .+..++.+++|++++|--
T Consensus       474 ~~~~p~~~~~~~~~~~~~  491 (498)
T 3b6h_A          474 GLMQPEHDVPVRYRIRPH  491 (498)
T ss_dssp             SBCCBSSCCEEEEEECCC
T ss_pred             ccCCCCCCccEEEEeccc
Confidence            345667888998888754


No 26 
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=100.00  E-value=8.4e-65  Score=496.45  Aligned_cols=400  Identities=17%  Similarity=0.227  Sum_probs=308.8

Q ss_pred             CCCCCCCCCCceecccc-cCCCChhHHHHHHHHHhCCeEEEec-CCeeEEEeCCHHHHHHHHHhccccccCCCcccchh-
Q 009821           52 PPLPPGPRALPLVGNIL-SAEPNLHRYFTKLSQIYGPIFKFYL-GRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAAAS-  128 (524)
Q Consensus        52 ~~~ppgp~~~p~iG~~~-~~~~~~~~~~~~~~~kyG~i~~~~~-g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~~-  128 (524)
                      ...||||+++|++|++. .+..+++.++.++ ++|||||++++ ++.++++++||+.+++++.++  .|++++...... 
T Consensus        25 ~~~~PGP~~~p~lG~~~~~~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~  101 (436)
T 2cd8_A           25 QQGTTASPPVLDLGALGQDFAADPYPTYARL-RAEGPAHRVRTPEGDEVWLVVGYDRARAVLADP--RFSKDWRNSTTPL  101 (436)
T ss_dssp             ---------CCBHHHHHHHHHHCCHHHHHHH-HTTCSEEEEECSSCCEEEEECSHHHHHHHHHCT--TEECCGGGCSSCC
T ss_pred             ccCCCCCCccccCCCCCcccccChHHHHHHH-HHhCCeeeeccCCCCeEEEEcCHHHHHHHHcCC--CCccccccccccc
Confidence            35689999999999975 4566789999999 99999999997 778899999999999999877  366654311111 


Q ss_pred             ----hhccCCcccccCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehhHHH-HHHHHHHHHHH
Q 009821          129 ----VLTYGGKSIGASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVGELM-FLTSLDVATRM  203 (524)
Q Consensus       129 ----~~~~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~-~~~~~dvi~~~  203 (524)
                          .....+....+|+.|+++|+.+. +.|+...++.+.+.+.+.++++++.+.+..++++|+.+.+ ..+++++|+. 
T Consensus       102 ~~~~~~~~~~l~~~dg~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~~vi~~-  179 (436)
T 2cd8_A          102 TEAEAALNHNMLESDPPRHTRLRKLVA-REFTMRRVELLRPRVQEIVDGLVDAMLAAPDGRADLMESLAWPLPITVISE-  179 (436)
T ss_dssp             CTTGGGTCCSGGGCCTTHHHHHHHHHG-GGSSHHHHHTTHHHHHHHHHHHHHHHHTCTTSCEEHHHHTTTHHHHHHHHH-
T ss_pred             ccccccccccccccCchHHHHHHHHhH-HhhCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHH-
Confidence                11112222338999999999997 8999999999999999999999999974336789999876 5799999998 


Q ss_pred             HhccCCCCCCchHHHHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCC
Q 009821          204 LWGASLRGEDWDAVAIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEG  283 (524)
Q Consensus       204 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~  283 (524)
                      +||.+..+      ...+......++.   . .    .|           ++..+..+.+.+++.+.+++++++      
T Consensus       180 ~~G~~~~~------~~~~~~~~~~~~~---~-~----~~-----------~~~~~~~~~~~~~~~~~i~~r~~~------  228 (436)
T 2cd8_A          180 LLGVPEPD------RAAFRVWTDAFVF---P-D----DP-----------AQAQTAMAEMSGYLSRLIDSKRGQ------  228 (436)
T ss_dssp             HHTCCGGG------HHHHHHHHHHHHS---C-S----ST-----------THHHHHHHHHHHHHHHHHHHHTTS------
T ss_pred             HhCCCHHH------HHHHHHHHHHHhc---c-C----CH-----------HHHHHHHHHHHHHHHHHHHHHhcC------
Confidence            68986532      1334444433321   0 0    00           334566778888888888877653      


Q ss_pred             CCcccHHHHHHHHhhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCccccc
Q 009821          284 KSSKDFLQTLLELQQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEF  363 (524)
Q Consensus       284 ~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~  363 (524)
                       ...|+++.|++...+++..++++++.+++. .+++||+|||+++++|++++|++||++|+|+++|++            
T Consensus       229 -~~~d~l~~ll~~~~~~~~~ls~~ei~~~~~-~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~e~~------------  294 (436)
T 2cd8_A          229 -DGEDLLSALVRTSDEDGSRLTSEELLGMAH-ILLVAGHETTVNLIANGMYALLSHPDQLAALRADMT------------  294 (436)
T ss_dssp             -CCCSHHHHHHHHHHHCTTTSCHHHHHHHHH-HHHHTTHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG------------
T ss_pred             -CCCCHHHHHHHhhhccCCCCCHHHHHHHHH-HHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHhhChh------------
Confidence             236899999987655445689999999999 999999999999999999999999999999999852            


Q ss_pred             ccCCChhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCc
Q 009821          364 HLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGD  443 (524)
Q Consensus       364 ~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~  443 (524)
                            |++|||+|+||++|+++..++|.+.+|++++||.||||+.|.++.+++||||++|+||++||||||-       
T Consensus       295 ------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~-------  361 (436)
T 2cd8_A          295 ------LLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFDIRRDT-------  361 (436)
T ss_dssp             ------GHHHHHHHHHHHHCSBSSCCCBEESSCEEETTEEECTTCCEEECHHHHTTCTTTSSSTTSCCTTSCC-------
T ss_pred             ------hHHHHHHHHHHhcCcccCceeEEeCCCeEECCEEECCCCEEEeChHHhCCCcccCCCccccCCCCCC-------
Confidence                  7999999999999999965899999999999999999999999999999999999999999999951       


Q ss_pred             ccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhc-eeeCCCC-CCCCcccccccccccCCCceeeeecCCCcccc
Q 009821          444 FRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLF-EWSLPEG-TKFDLSDKLLMALKKSEPLVVIPTPRSLSALE  521 (524)
Q Consensus       444 ~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~r~~~~~~  521 (524)
                           ..|+|||+|+|.|+|++||++|++++++.|+++| ++++..+ .++.+.  ...+.....+++|++++|++-.++
T Consensus       362 -----~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~--~~~~~~~~~~l~v~~~~r~~~~~~  434 (436)
T 2cd8_A          362 -----AGHLAFGHGIHFCIGAPLARLEARIAVRALLERCPDLALDVSPGELVWY--PNPMIRGLKALPIRWRRGREAGRR  434 (436)
T ss_dssp             -----TTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHSCTTCCBCSCGGGCCBC--CCTTBCCBSCCEEC----------
T ss_pred             -----CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCceecCCCccceec--cCcccCCcceeEEEEecCcccccC
Confidence                 2589999999999999999999999999999999 6998643 233332  234445667899999999876665


No 27 
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=100.00  E-value=4.8e-65  Score=507.40  Aligned_cols=435  Identities=17%  Similarity=0.211  Sum_probs=304.3

Q ss_pred             CCCCCCCCCCC-CceecccccCCCChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCcc--cc
Q 009821           50 STPPLPPGPRA-LPLVGNILSAEPNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPS--AA  126 (524)
Q Consensus        50 ~~~~~ppgp~~-~p~iG~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~--~~  126 (524)
                      ...+.||||++ +|++||++.+..+++.++.+++++||+||++++|+.++++++||+.+++++.++.. ++.+...  ..
T Consensus        15 ~~~~~pPgp~~~~P~iG~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~-~~~~~~~~~~~   93 (475)
T 3b98_A           15 RRRNEPPLDKGMIPWLGHALEFGKDAAKFLTRMKEKHGDIFTVRAAGLYITVLLDSNCYDAVLSDVAS-LDQTSYAQVLM   93 (475)
T ss_dssp             CCTTCCCEECCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECCTTTHHHHHTCTTT-EESHHHHHHHH
T ss_pred             cCCCCCCCCCCCcchHHhHHHHhhCHHHHHHHHHHHhCCeEEEEECCceEEEEeCHHHHHHHHcCccc-CCchHHHHHHH
Confidence            34567899887 99999999887789999999999999999999999999999999999999987652 3222111  11


Q ss_pred             hhhhccCCcccccCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccC----CCceehhHHHHHHHHHHHHH
Q 009821          127 ASVLTYGGKSIGASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRV----GSPIKVGELMFLTSLDVATR  202 (524)
Q Consensus       127 ~~~~~~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~----~~~vd~~~~~~~~~~dvi~~  202 (524)
                      ...++ .+....+++.   +|+.+. +.|+...++.+.+.+.+++.++++.+....    ...+++...+..+++++++.
T Consensus        94 ~~~~g-~~~~~~~~~~---~R~~~~-~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (475)
T 3b98_A           94 KRIFN-MILPSHNPES---EKKRAE-MHFQGASLTQLSNSMQNNLRLLMTPSEMGLKTSEWKKDGLFNLCYSLLFKTGYL  168 (475)
T ss_dssp             HHTTC-CCCTTCCHHH---HHHHHH-HHTSHHHHHHHHHHHHHHHHHHSSTTTTTCSSCSCEEEEHHHHHHHHHHHHHHH
T ss_pred             HHHhC-CCCCCCChHH---HHHHHH-HHcChhhHHHHHHHHHHHHHHHHhhcccccCCCCceeehHHHHHHHHHHHHhhh
Confidence            11111 1111124443   455554 688989999999999888888877664321    22567888888888888888


Q ss_pred             HHhccCCCCCCchHHHHHHHHHHHHHHHHhcCCCcccccccccc-cCccchHHHHHHHHHHHHHHHHHhhccccCCCCCC
Q 009821          203 MLWGASLRGEDWDAVAIQFREVLEEMFQVLGSGNISDLFPLLTR-FDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMN  281 (524)
Q Consensus       203 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~-~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~  281 (524)
                      ..||.+.  ...+ ....+...+..+.         ..+|++.+ +......+...+..+.+.+.   ..+++.+.    
T Consensus       169 ~~~g~~~--~~~~-~~~~~~~~~~~~~---------~~~p~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~----  229 (475)
T 3b98_A          169 TVFGAEN--NNSA-ALTQIYEEFRRFD---------KLLPKLARTTVNKEEKQIASAAREKLWKW---LTPSGLDR----  229 (475)
T ss_dssp             HHHCCTT--SCHH-HHHHHHHHHHHHH---------HHHHHHHTTCCCHHHHHHHHHHHHHHHHH---HSCTTSCC----
T ss_pred             heeCCcc--ccch-hcHHHHHHHHHHH---------hhhHHHHHHhcChhhhHHHHHHHHHHHHH---HHHHHhhc----
Confidence            8888532  1111 1122222222111         12333221 11111122333333333222   22222221    


Q ss_pred             CCCCcccHHHHHHHHhhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCccc
Q 009821          282 EGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVE  361 (524)
Q Consensus       282 ~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~  361 (524)
                       .+...|+++.+++...+.+ .++++++. +++ .+++||+|||+++++|++++|++||++|+|||+|++  .+ +..++
T Consensus       230 -~~~~~d~l~~ll~~~~~~~-~~~~~~i~-~~~-~~l~ag~~TTa~~l~~~l~~L~~~P~~~~~l~~Ei~--~~-~~~~~  302 (475)
T 3b98_A          230 -KPREQSWLGSYVKQLQDEG-IDAEMQRR-AML-LQLWVTQGNAGPAAFWVMGYLLTHPEALRAVREEIQ--GG-KHLRL  302 (475)
T ss_dssp             -CCCTTSHHHHHHHHHHHTT-CCHHHHHH-HHH-HHHHHHHSSHHHHHHHHHHHHHTCHHHHHHHHHHHC----------
T ss_pred             -cccccHHHHHHHHHHHHcC-CCHHHHHH-HHH-HHHHHccccHHHHHHHHHHHHHcCHHHHHHHHHHHh--cC-CCCCC
Confidence             2345799999998755433 47778877 777 899999999999999999999999999999999999  23 34568


Q ss_pred             ccccCCChhHHHHHHhhhcCCCCCCCcCccccCCCccc-----cceeeCCCCEEEeehhh-hccCCCCCCCCCCCCCCcc
Q 009821          362 EFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNL-----SGYTIPKGSTIFINAWA-IQRNPEVWENPQDFQPDRF  435 (524)
Q Consensus       362 ~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~-----~g~~ip~G~~v~~~~~~-~h~d~~~~~dp~~F~PeR~  435 (524)
                      .+++.+||||+|||+|+||++|+ +. ++|.+.+|+++     +||.||||+.|.++.++ +||||++|+||++||||||
T Consensus       303 ~~~~~~lpyl~a~i~E~lRl~p~-~~-~~R~~~~d~~l~~~~g~g~~Ip~Gt~V~~~~~~~~~rdp~~~~dP~~F~PeRf  380 (475)
T 3b98_A          303 EERQKNTPVFDSVLWETLRLTAA-AL-ITRDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRF  380 (475)
T ss_dssp             -----CCHHHHHHHHHHHHHHEE-EC-EEEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCTCTTTSSSTTSCCTTTT
T ss_pred             HHHHhcCHHHHHHHHHHHhcCCc-cc-eeEEecCCeEeecCCCCeEEECCCCEEEeCcHHHhcCChhhcCCcccCCcchh
Confidence            99999999999999999999986 65 68999999998     88999999999999999 9999999999999999999


Q ss_pred             ccccCCCc------ccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCC--CCCccc--ccccccccC
Q 009821          436 LEDVKIGD------FRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGT--KFDLSD--KLLMALKKS  505 (524)
Q Consensus       436 ~~~~~~~~------~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~--~~~~~~--~~~~~~~~~  505 (524)
                      ++.++...      ....+..|+|||+|+|.|||++||.+|++++++.|+++|+++++++.  ..+...  ....+..++
T Consensus       381 l~~~~~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~p~  460 (475)
T 3b98_A          381 LNADRTEKKDFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTILTRFDVELCDKNATVPLVDPSRYGFGILQPA  460 (475)
T ss_dssp             BCTTSCBCCCCBSSSCBCSCSCCTTCSTTSCCTTHHHHHHHHHHHHHHHHHHEEEEESSTTCCCCCBCGGGTBEEECCBS
T ss_pred             cCCCCCccccccccccccccCccCcCCCCCCCCCHHHHHHHHHHHHHHHHHhEEEEECCCCCCCCCCCcccccccccCCC
Confidence            96532110      01124679999999999999999999999999999999999988763  122221  122355677


Q ss_pred             CCceeeeecCCCc
Q 009821          506 EPLVVIPTPRSLS  518 (524)
Q Consensus       506 ~~~~v~~~~r~~~  518 (524)
                      .+++|++++|+++
T Consensus       461 ~~~~~~~~~R~~~  473 (475)
T 3b98_A          461 GDLEIRYRIRFHH  473 (475)
T ss_dssp             SCCEEEEEEC---
T ss_pred             CCceEEEEecccc
Confidence            8999999999875


No 28 
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=100.00  E-value=8.4e-64  Score=488.48  Aligned_cols=401  Identities=17%  Similarity=0.238  Sum_probs=317.6

Q ss_pred             ceecccccCCCChhHHHHHHHHHhC-CeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCccc--ch-hhhccCCccc
Q 009821           62 PLVGNILSAEPNLHRYFTKLSQIYG-PIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSA--AA-SVLTYGGKSI  137 (524)
Q Consensus        62 p~iG~~~~~~~~~~~~~~~~~~kyG-~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~--~~-~~~~~~~~~~  137 (524)
                      |++||+..+..+++.++.+++++|| |||++.+++.++++++||+.++.++ ++. .|.+.....  .. ..++..+...
T Consensus         9 P~lG~~~~~~~~p~~~~~~l~~~yg~pv~~~~~~g~~~v~v~~~~~~~~l~-~~~-~~~~~~~~~~~~~~~~~g~~~l~~   86 (417)
T 1izo_A            9 KSLDNSLTLLKEGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFY-DTD-RFQRQNALPKRVQKSLFGVNAIQG   86 (417)
T ss_dssp             CCTTHHHHHHHHGGGHHHHHHHHTTSSEEEEEETTEEEEEECSHHHHHHHT-CTT-TEECTTCSCHHHHTTTTCTTCGGG
T ss_pred             CccchHHHHhhCcHHHHHHHHHHhCCCeEEeecCCccEEEECCHHHHHHHh-ccc-ccccccccccchhhhhccccceee
Confidence            8999998887788999999999998 8999998888999999999998554 332 244332111  11 1122122223


Q ss_pred             ccCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHHHHHHhccCCCCCCchHH
Q 009821          138 GASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVGELMFLTSLDVATRMLWGASLRGEDWDAV  217 (524)
Q Consensus       138 ~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~  217 (524)
                      .+|+.|+++|+.+. +.|+...++.+.+.+.+.++++++.+.+  ++++|+.+.+..+++++++++ ||.++++.+    
T Consensus        87 ~dg~~h~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~--~~~~dl~~~~~~~~~~vi~~~-~G~~~~~~~----  158 (417)
T 1izo_A           87 MDGSAHIHRKMLFL-SLMTPPHQKRLAELMTEEWKAAVTRWEK--ADEVVLFEEAKEILCRVACYW-AGVPLKETE----  158 (417)
T ss_dssp             CCHHHHHHHHHHHH-HTSSHHHHHHHHHHHHHHHHHHHHHHTT--SSEEEHHHHHHHHHHHHHHHH-HTCCCCTTT----
T ss_pred             cCChHHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHhc--CCCeeHHHHHHHHHHHHHHHH-cCCCCCchH----
Confidence            38899999999986 8999999999999999999999999865  678999999999999999998 599876532    


Q ss_pred             HHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcccHHHHHHHHh
Q 009821          218 AIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSSKDFLQTLLELQ  297 (524)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~  297 (524)
                      ..++.+.+..++.....     ..|         ..+...+..+.+.+++.+.+++++++..   .....|+++.+++..
T Consensus       159 ~~~~~~~~~~~~~~~~~-----~~~---------~~~~~~~~~~~~~~~~~~~i~~r~~~~~---~~~~~d~l~~ll~~~  221 (417)
T 1izo_A          159 VKERADDFIDMVDAFGA-----VGP---------RHWKGRRARPRAEEWIEVMIEDARAGLL---KTTSGTALHEMAFHT  221 (417)
T ss_dssp             HHHHHHHHHHHHHHTTC-----CSH---------HHHHHHHHHHHHHHHHHHHHHHHHTTSS---CCCTTSHHHHHHHCB
T ss_pred             HHHHHHHHHHHHhhccc-----CCc---------cchhHHHHHHHHHHHHHHHHHHHHhhcc---CCCcCCHHHHHHHhc
Confidence            13344433333332110     111         1133456777888888888888776432   223468999999875


Q ss_pred             hcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcccccccCCChhHHHHHHh
Q 009821          298 QQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLPYLEAIVKE  377 (524)
Q Consensus       298 ~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E  377 (524)
                      +.++..++++++..++. . ++||++||+++++|++++|++||++|+|+++|                 ++||+++||+|
T Consensus       222 ~~~g~~l~~~~~~~~~~-~-~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~E-----------------~~~~l~a~i~E  282 (417)
T 1izo_A          222 QEDGSQLDSRMAAIELI-N-VLRPIVAISYFLVFSALALHEHPKYKEWLRSG-----------------NSREREMFVQE  282 (417)
T ss_dssp             CTTSCBCCHHHHHHHHH-H-HHHHHHTHHHHHHHHHHHHHHSTHHHHHHHTC-----------------CHHHHHHHHHH
T ss_pred             cccCCCCCHHHHHHHHH-H-HHhhhhHHHHHHHHHHHHHhhCHHHHHHHHhc-----------------CCHHHHHHHHH
Confidence            54455678887776665 4 45899999999999999999999999999987                 47899999999


Q ss_pred             hhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCcccCCccceeecCCC
Q 009821          378 TLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGDFRGNNFNYLPFGSG  457 (524)
Q Consensus       378 ~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~~~~~~~~~pFg~G  457 (524)
                      +||++|+++. ++|.+.+|++++|+.||||+.|.++.+++||||++|+||++||||||+..+      ..+..|+|||+|
T Consensus       283 ~lRl~p~~~~-~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~rdp~~~~dp~~F~P~R~~~~~------~~~~~~~~FG~G  355 (417)
T 1izo_A          283 VRRYYPFGPF-LGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERFAERE------ENLFDMIPQGGG  355 (417)
T ss_dssp             HHHHSCCCCE-EEEEECSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCGGGGTTCC------CCSSSCCTTCSS
T ss_pred             HhhcCCcccc-cceeecCCeeECCEEECCCCEEEecHHHhhcCccccCCccccChhhcCCCC------CCCcceeCCCCC
Confidence            9999999998 789999999999999999999999999999999999999999999999542      234679999999


Q ss_pred             ----CCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCCCCCcccccccccccCCCceeeeecCCC
Q 009821          458 ----RRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTKFDLSDKLLMALKKSEPLVVIPTPRSL  517 (524)
Q Consensus       458 ----~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~  517 (524)
                          +|.|+|++||.+|++++++.|+++|++++.++ +.... ....+..++.+++|++++|++
T Consensus       356 ~r~~~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~-~~~~~-~~~~~~~p~~~~~~~~~~r~~  417 (417)
T 1izo_A          356 HAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVPEQ-SLHYS-LARMPSLPESGFVMSGIRRKS  417 (417)
T ss_dssp             CTTSSSCCTTHHHHHHHHHHHHHHHHHTEEEECCSC-CCCCC-SSSSSCCCTTCCEEEEEEEC-
T ss_pred             CCCCCCcCCCHHHHHHHHHHHHHHHHHhCeEEeCCC-CcCcc-cccCCCCCCCCceEeeeeCCC
Confidence                59999999999999999999999999998765 33322 224566677899999999874


No 29 
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=100.00  E-value=2.5e-64  Score=486.94  Aligned_cols=383  Identities=20%  Similarity=0.239  Sum_probs=306.8

Q ss_pred             CCCCCceecccccCCCChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCC-cccchhhhccCCc
Q 009821           57 GPRALPLVGNILSAEPNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRD-PSAAASVLTYGGK  135 (524)
Q Consensus        57 gp~~~p~iG~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~-~~~~~~~~~~~~~  135 (524)
                      +++..|++||+..+..+++.++.+++++|||+|+ ++|+.++++++||+.+++++.++  .|.+++ ...........+.
T Consensus         3 ~~~~~p~iGnl~~~~~~p~~~~~~l~~~yGpv~~-~~g~~~~vvv~~~~~i~~il~~~--~f~~~~~~~~~~~~~~g~~l   79 (389)
T 1n97_A            3 RLSLREAWPYLKDLQQDPLAVLLAWGRAHPRLFL-PLPRFPLALIFDPEGVEGALLAE--GTTKATFQYRALSRLTGRGL   79 (389)
T ss_dssp             ECCHHHHHHHHHHHHHCHHHHHHHHHHHCSEEEE-CCTTCCEEEECSHHHHHHHHHCT--TEECCSHHHHHHHHHHCSST
T ss_pred             ccccccccccHHHHhhChHHHHHHHHHHcCCeeE-ecCCccEEEECCHHHHHHHHhcC--CCCCChhHHHHHHHHhCCcc
Confidence            3456899999988867889999999999999999 99998999999999999999877  577665 2211111222233


Q ss_pred             ccccCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHHHHHHhccCCCCCCch
Q 009821          136 SIGASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVGELMFLTSLDVATRMLWGASLRGEDWD  215 (524)
Q Consensus       136 ~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~  215 (524)
                      ...+|+.|+++|+.+. +.|+...++.+.+.+.+.++++++.+.   ++++|+.+.+..+++|++++++||.++.+    
T Consensus        80 ~~~~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~---~~~~dl~~~~~~~~~~vi~~~~fG~~~~~----  151 (389)
T 1n97_A           80 LTDWGESWKEARKALK-DPFLPKNVRGYREAMEEEARAFFGEWR---GEERDLDHEMLALSLRLLGRALFGKPLSP----  151 (389)
T ss_dssp             TTCCHHHHHHHHHHHC-GGGSHHHHHTTHHHHHHHHHHHHHTCC---SCCEEHHHHHHHHHHHHHHHHHHSSCCCH----
T ss_pred             ccCCcHHHHHHHHHhC-cccCHHHHHHHHHHHHHHHHHHHHHcc---CCcCcHHHHHHHHHHHHHHHHHcCCcchH----
Confidence            3338899999999997 899999999999999999999999886   57899999999999999999999998862    


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcccHHHHHHH
Q 009821          216 AVAIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSSKDFLQTLLE  295 (524)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~  295 (524)
                          ++.+.+..+......    ..++.+.+++ ....++..+..+.+.+++.+.++++                  ++ 
T Consensus       152 ----~~~~~~~~~~~~~~~----~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~i~~r------------------ll-  203 (389)
T 1n97_A          152 ----SLAEHALKALDRIMA----QTRSPLALLD-LAAEARFRKDRGALYREAEALIVHP------------------PL-  203 (389)
T ss_dssp             ----HHHHHHHHHHHHHHH----HHHCGGGGGC-HHHHHHHHHHHHHHHHHHGGGTTST------------------TG-
T ss_pred             ----HHHHHHHHHHHHHHH----HHhhHHHhcC-CchhHHHHHHHHHHHHHHHHHHHHH------------------hc-
Confidence                233333333322110    0111112221 1123445556666666666665433                  22 


Q ss_pred             HhhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcccccccCCChhHHHHH
Q 009821          296 LQQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLPYLEAIV  375 (524)
Q Consensus       296 ~~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i  375 (524)
                            ..++++++.+++. .+++||+|||+++++|++++|++||++|+|+++|++.+.                  |||
T Consensus       204 ------~~l~~~~l~~~~~-~~~~aG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~~~~------------------a~i  258 (389)
T 1n97_A          204 ------SHLPRERALSEAV-TLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAAL------------------AAF  258 (389)
T ss_dssp             ------GGSCHHHHHHHHH-HHHHHHSHHHHHHHHHHHHHHTTCHHHHHHHHHCHHHHH------------------HHH
T ss_pred             ------ccCCHHHHHHHHH-HHHHcCchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH------------------HHH
Confidence                  2478999999998 999999999999999999999999999999999999874                  999


Q ss_pred             HhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCcccCCccceeecC
Q 009821          376 KETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGDFRGNNFNYLPFG  455 (524)
Q Consensus       376 ~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~~~~~~~~~pFg  455 (524)
                      +|+||++|+++. .+|.+.+|++++||.||||+.|.++.+++|||  +|+||++||||||+++.     ...+..|+|||
T Consensus       259 ~E~lRl~p~~~~-~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rd--~~~dp~~F~PeR~l~~~-----~~~~~~~~~FG  330 (389)
T 1n97_A          259 QEALRLYPPAWI-LTRRLERPLLLGEDRLPPGTTLVLSPYVTQRL--HFPDGEAFRPERFLEER-----GTPSGRYFPFG  330 (389)
T ss_dssp             HHHHHHSCSSCC-EEEEESSCEEETTEEECTTCEEEECHHHHHHH--SSTTTTSCCTTHHHHSC-----CCCBTTBCTTC
T ss_pred             HHHHhcCCCccc-cceeeCCCceECCEEeCCCCEEEECHHHHhhh--cCCCccccCCccCCCCC-----CCCCCCccCCC
Confidence            999999999998 58999999999999999999999999999999  99999999999998641     12346799999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCCCCCcccccccccccCCCceeeeecC
Q 009821          456 SGRRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTKFDLSDKLLMALKKSEPLVVIPTPR  515 (524)
Q Consensus       456 ~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  515 (524)
                      +|+|.|||++||.+|++++++.|+++|++++.++.+.    ..+.+..+..+++|++++|
T Consensus       331 ~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~----~~~~~~~p~~~~~v~~~~~  386 (389)
T 1n97_A          331 LGQRLCLGRDFALLEGPIVLRAFFRRFRLDPLPFPRV----LAQVTLRPEGGLPARPREE  386 (389)
T ss_dssp             CSTTCCTTHHHHHHHHHHHHHHHHTTCBCCCCCCCCE----EESSSEEETTCCEECCBC-
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHhceEEeCCCCcc----cceEEeeeCCCceEEEeec
Confidence            9999999999999999999999999999998876432    3456667777899999886


No 30 
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=100.00  E-value=3.2e-62  Score=477.03  Aligned_cols=402  Identities=16%  Similarity=0.229  Sum_probs=314.2

Q ss_pred             CCCCCCCceecccccCCCChhHHHHHHHHHh-CCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCccc--ch-hhh
Q 009821           55 PPGPRALPLVGNILSAEPNLHRYFTKLSQIY-GPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSA--AA-SVL  130 (524)
Q Consensus        55 ppgp~~~p~iG~~~~~~~~~~~~~~~~~~ky-G~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~--~~-~~~  130 (524)
                      ||||   |++||+..+..+++.++.+++++| ||||++.+++.+++++++|+.++ ++.++. .|++.....  .. ..+
T Consensus         4 pPg~---P~iG~~~~~~~~p~~~~~~l~~~y~gpv~~~~~~g~~~~vv~~~~~~~-~l~~~~-~f~~~~~~~~~~~~~~~   78 (415)
T 3awm_A            4 TPHT---KGPDETLSLLADPYRFISRQCQRLGANAFESRFLLKKTNCLKGAKAAE-IFYDTT-RFEREGAMPVAIQKTLL   78 (415)
T ss_dssp             --------CCCCHHHHHHSTTTHHHHHHHHHTSSEEEEEETTEEEEEEESHHHHH-HHTCTT-TEECTTCSCHHHHTTTS
T ss_pred             CCCC---CccchHHHHHhChHHHHHHHHHHhCCCeEEEecCCCcEEEEeCHHHHH-HHhccc-ccccccccchhhhhhcc
Confidence            6665   899999888778999999999999 79999998888999999999987 666553 355432211  11 111


Q ss_pred             ccCCcccccCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHHHHHHhccCCC
Q 009821          131 TYGGKSIGASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVGELMFLTSLDVATRMLWGASLR  210 (524)
Q Consensus       131 ~~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~  210 (524)
                      +..+....+|+.|+++|+.+. +.|++..++.+.+.+.+.++++++.+.+  ++++|+.+.+..+++++++++ ||.++.
T Consensus        79 g~~~l~~~dg~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~~~~--~~~vdl~~~~~~~~~~vi~~~-~G~~~~  154 (415)
T 3awm_A           79 GQGGVQGLDGETHRHRKQMFM-GLMTPERVRALAQLFEAEWRRAVPGWTR--KGEIVFYDELHEPLTRAVCAW-AGVPLP  154 (415)
T ss_dssp             CSSSGGGCCHHHHHHHHHHHH-TTCCHHHHHHHHHHHHHHHHHHHHHHHH--HSEEEHHHHHHHHHHHHHHHH-HTCCCC
T ss_pred             CCcceeecCcHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHhhcc--CCcEeHHHHHHHHHHHHHHHH-cCCCCC
Confidence            112222338899999999986 8999999999999999999999999875  568999999999999999999 898875


Q ss_pred             CCCchHHHHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcccHH
Q 009821          211 GEDWDAVAIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSSKDFL  290 (524)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l  290 (524)
                      ..+    ..++.+.+..+.....     ...|         ..++..+..+.+.+++.+.+++++++..   .....|++
T Consensus       155 ~~~----~~~~~~~~~~~~~~~~-----~~~~---------~~~~~~~~~~~~~~~~~~~i~~r~~~~~---~~~~~d~l  213 (415)
T 3awm_A          155 DDE----AGNRAGELRALFDAAG-----SASP---------RHLWSRLARRRVDAWAKRIIEGIRAGSI---GSGSGTAA  213 (415)
T ss_dssp             GGG----HHHHHHHHHHHHHSTT-----CSSH---------HHHHHHHHHHHHHHHHHHHHHHHHHTSS---CCCTTSHH
T ss_pred             cch----HHHHHHHHHHHHHHhc-----ccCc---------hHHHHHHHHHHHHHHHHHHHHHHHHhhh---cCCCCCHH
Confidence            422    1233333333322111     0011         1234556777888888888888766432   22346899


Q ss_pred             HHHHHHhhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcccccccCCChh
Q 009821          291 QTLLELQQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLPY  370 (524)
Q Consensus       291 ~~ll~~~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~~l~~lpy  370 (524)
                      +.|++..+.++..++++++..++. .+ +||++||+++++|++++|++||++|+|+|+|                  +||
T Consensus       214 ~~ll~~~~~~g~~~~~~~~~~~~~-~~-~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~e------------------~~~  273 (415)
T 3awm_A          214 YAIAWHRDRHDDLLSPHVAAVELV-NV-LRPTVAIAVYITFVAHALQTCSGIRAALVQQ------------------PDY  273 (415)
T ss_dssp             HHHHHCBCTTSCBCCHHHHHHHHH-HH-HHHHHTHHHHHHHHHHHHHHSTTHHHHHHHC------------------TTH
T ss_pred             HHHHhhhhccCCCCCHHHHHHHHH-HH-HHhhhhHHHHHHHHHHHHHhChHHHHHHHHH------------------HHH
Confidence            999987554455688888777665 44 4899999999999999999999999999987                  589


Q ss_pred             HHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCcccCCccc
Q 009821          371 LEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGDFRGNNFN  450 (524)
Q Consensus       371 l~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~~~~~~~  450 (524)
                      +++||+|+||++|+++. ++|.+.+|++++|+.||+|+.|.++.+++||||++|+||++||||||++.+      ..+..
T Consensus       274 l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~G~~ip~G~~V~~~~~~~~rdp~~~~dp~~F~P~R~~~~~------~~~~~  346 (415)
T 3awm_A          274 AELFVQEVRRFYPFFPA-VVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERFRAWD------EDSFN  346 (415)
T ss_dssp             HHHHHHHHHHHSCCSCE-EEEEESSCEEETTEEECTTCEEEEEHHHHHTCHHHHSSTTSCCGGGGGGCC------CCSSS
T ss_pred             HHHHHHHHhhcCCCccc-cceeecCCeEECCEEECCCCEEEeCchhhcCCccccCCccccChhhcCCCC------CCCCC
Confidence            99999999999999998 789999999999999999999999999999999999999999999999642      13467


Q ss_pred             eeecCCC----CCCCCCHHHHHHHHHHHHHHHhhhceeeCCCCCCCCcccccccccccCCCceeeeecC
Q 009821          451 YLPFGSG----RRICPGIPLAEKIVPHVLANLLHLFEWSLPEGTKFDLSDKLLMALKKSEPLVVIPTPR  515 (524)
Q Consensus       451 ~~pFg~G----~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  515 (524)
                      |+|||+|    +|.|+|++||.+|++++++.|+++|++++.++ +..+. ....+..++.+++|+++++
T Consensus       347 ~~~FG~G~r~~~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~-~~~~~-~~~~~~~p~~~~~~~~~~~  413 (415)
T 3awm_A          347 FIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQ-DLSID-FARLPALPKSGFVMRNVHI  413 (415)
T ss_dssp             CCTTCCSCTTTSCCCTTHHHHHHHHHHHHHHHHHTCEEECCSC-CCCBC-TTSSSCCBTTCCEEEEEES
T ss_pred             ccCCCCCCCCCCCcCchHHHHHHHHHHHHHHHHHhcEEEeCCC-CCCcC-cCCCccccCCCceEEEEeC
Confidence            9999999    59999999999999999999999999998765 33322 2346667778899999865


No 31 
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=100.00  E-value=5.6e-62  Score=472.67  Aligned_cols=382  Identities=15%  Similarity=0.203  Sum_probs=304.6

Q ss_pred             CCCCCCCCCCCceecccccCCCChhHHHHHHHHHhCCeEEEe----c-CC-eeEEEeCCHHHHHHHH-HhccccccCCCc
Q 009821           51 TPPLPPGPRALPLVGNILSAEPNLHRYFTKLSQIYGPIFKFY----L-GR-KLCIVIGSPSLAKQVL-KEHDVVFANRDP  123 (524)
Q Consensus        51 ~~~~ppgp~~~p~iG~~~~~~~~~~~~~~~~~~kyG~i~~~~----~-g~-~~~vvv~dp~~i~~il-~~~~~~~~~~~~  123 (524)
                      ..+.||||+++|+.     +..+++.++.++ ++||+||+++    + ++ .++++++||+.+++++ .++.  +.+++.
T Consensus         8 ~~~lppgp~~~p~~-----~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~~~~~~vvv~~~~~i~~vl~~~~~--~~~~~~   79 (406)
T 1ued_A            8 VAPLLREPANFQLR-----TNCDPHEDNFGL-RAHGPLVRIVGESSTQLGRDFVWQAHGYEVVRRILGDHEH--FTTRPQ   79 (406)
T ss_dssp             CCCEEECCTTTTCE-----ETTEECHHHHHH-HTTCSEEEEESHHHHHTTSSCEEEECSHHHHHHHHHCCSS--EECCCC
T ss_pred             CCCCcccCcccCCC-----CCCCcHHHHHHH-HHhCCeeeecccccCCCCCccEEEEcCHHHHHHHHhhCcc--cccccc
Confidence            35578999999987     456889999999 9999999999    6 77 8999999999999999 5543  444432


Q ss_pred             ccch--hh----hccCCcccccCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehhHHHHH-HH
Q 009821          124 SAAA--SV----LTYGGKSIGASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVGELMFL-TS  196 (524)
Q Consensus       124 ~~~~--~~----~~~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~~~-~~  196 (524)
                      ....  ..    ...++....+|+.|+++|+.+. +.|+...++.+.+.+.++++++++.+.. .++++|+.+.+.. ++
T Consensus        80 ~~~~~~~~~~~~~~~~~l~~~~g~~~~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~-~g~~~d~~~~~~~~~~  157 (406)
T 1ued_A           80 FTQSKSGAHVEAQFVGQISTYDPPEHTRLRKMLT-PEFTVRRIRRMEPAIQSLIDDRLDLLEA-EGPSADLQGLFADPVG  157 (406)
T ss_dssp             C---------CGGGTTCGGGCCTTHHHHHHHHHG-GGSSHHHHHHHHHHHHHHHHHHHHHHHH-HCTTEEHHHHTHHHHH
T ss_pred             ccccccccccccccccccccCCCHHHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCeeHHHHHHHHhH
Confidence            1111  00    1112222338999999999997 8999999999999999999999999875 4678999987765 99


Q ss_pred             HHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccC
Q 009821          197 LDVATRMLWGASLRGEDWDAVAIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQS  276 (524)
Q Consensus       197 ~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~  276 (524)
                      +++++ .+||.+..      ....+......++.    .    .      .    ..++..+..+.+.+++.+.++++++
T Consensus       158 ~~vi~-~~~G~~~~------~~~~~~~~~~~~~~----~----~------~----~~~~~~~~~~~~~~~~~~~i~~r~~  212 (406)
T 1ued_A          158 AHALC-ELLGIPRD------DQREFVRRIRRNAD----L----S------R----GLKARAADSAAFNRYLDNLLARQRA  212 (406)
T ss_dssp             HHHHH-HHHTCCHH------HHHHHHHHHHHCC-----------------C----CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHH-HHcCCCHH------HHHHHHHHHHHHHh----c----c------C----CHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999 47898642      11233333322211    0    0      0    1244566777888888888887765


Q ss_pred             CCCCCCCCCcccHHHHHHHHhhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcC
Q 009821          277 GQDMNEGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVAR  356 (524)
Q Consensus       277 ~~~~~~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~  356 (524)
                      +.       ..|+++.|++..   +..++++++.+++. .+++||+|||+++++|++++|++||++|+|+|+|++     
T Consensus       213 ~~-------~~d~l~~ll~~~---~~~ls~~ei~~~~~-~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~-----  276 (406)
T 1ued_A          213 DP-------DDGLLGMIVRDH---GDNVTDEELKGLCT-ALILGGVETVAGMIGFGVLALLDNPGQIELLFESPE-----  276 (406)
T ss_dssp             SC-------CSSHHHHHHHHH---GGGSCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHSGGGTTHHHHCHH-----
T ss_pred             CC-------CCCHHHHHHHhc---CCCCCHHHHHHHHH-HHHHHhhHHHHHHHHHHHHHHHhChHHHHHHHhCHH-----
Confidence            31       368999999875   24689999999999 999999999999999999999999999999999874     


Q ss_pred             CCcccccccCCChhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccc
Q 009821          357 DSVVEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFL  436 (524)
Q Consensus       357 ~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~  436 (524)
                                   |++|||+|+||++|+++..++|.+.+|++++||.||||+.|.++.+++||||++|+||++||||||-
T Consensus       277 -------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~  343 (406)
T 1ued_A          277 -------------KAERVVNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALTPDPDVLDANRAA  343 (406)
T ss_dssp             -------------HHHHHHHHHHHHHCSSCSCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC
T ss_pred             -------------HHHHHHHHHHhcCCCcccCcceecCCCEEECCEEECCCCEEEecHHHhcCCchhCCChhhcCCCCCC
Confidence                         6899999999999999976789999999999999999999999999999999999999999999982


Q ss_pred             cccCCCcccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhc-eeeCCCC-CCCCcccccccccccCCCceee
Q 009821          437 EDVKIGDFRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLF-EWSLPEG-TKFDLSDKLLMALKKSEPLVVI  511 (524)
Q Consensus       437 ~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~  511 (524)
                                  ..++|||+|+|.|+|++||++|++++++.|+++| ++++.++ .++++.  ...+..+ ..++|+
T Consensus       344 ------------~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~--~~~~~~~-~~lpv~  405 (406)
T 1ued_A          344 ------------VSDVGFGHGIHYCVGAALARSMLRMAYQTLWRRFPGLRLAVPIEEVKYR--SAFVDCP-DQVPVT  405 (406)
T ss_dssp             ------------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBC--CSSSCCB-SCCEEE
T ss_pred             ------------CCCCCCCCCCcCCCcHHHHHHHHHHHHHHHHHhCCCceecCCccccccc--ccccccC-Ceeeee
Confidence                        2589999999999999999999999999999999 7998743 233332  2344445 666664


No 32 
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=100.00  E-value=5e-61  Score=466.88  Aligned_cols=370  Identities=15%  Similarity=0.181  Sum_probs=294.9

Q ss_pred             CCCCCCCCceecccccCCCChhHHHHHHHHHhCCeEEEecC-CeeEEEeCCHHHHHHHHHhccc-cccCCCcccchh---
Q 009821           54 LPPGPRALPLVGNILSAEPNLHRYFTKLSQIYGPIFKFYLG-RKLCIVIGSPSLAKQVLKEHDV-VFANRDPSAAAS---  128 (524)
Q Consensus        54 ~ppgp~~~p~iG~~~~~~~~~~~~~~~~~~kyG~i~~~~~g-~~~~vvv~dp~~i~~il~~~~~-~~~~~~~~~~~~---  128 (524)
                      .||||+++|++|++..   +++..+.+++ +||||+++.++ +...++|++++.+++++.++.. .+..++......   
T Consensus         2 ~pPGp~~~P~~g~~~~---~p~~~~~~l~-~~Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~~~~~~~~r~~~~~~~~~~   77 (404)
T 1jfb_A            2 MASGAPSFPFSRASGP---EPPAEFAKLR-ATNPVSQVKLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGFPELSASG   77 (404)
T ss_dssp             ----CCBSSCCCSSTT---SCCTHHHHHH-HHCSEEEEECTTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCCCCSHHH
T ss_pred             CCCCCCCCCCCCCcCC---CccHHHHHHH-HhCCeeeeecCCCCceEEEecHHHHHHHHcCCcccccccccCCccccccc
Confidence            4899999999999875   7888999985 69999998874 5667789999999999987642 222222211111   


Q ss_pred             ---hhccCCcccccCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhcc--CCCceehhHHHHHHHHHHHHHH
Q 009821          129 ---VLTYGGKSIGASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGR--VGSPIKVGELMFLTSLDVATRM  203 (524)
Q Consensus       129 ---~~~~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~--~~~~vd~~~~~~~~~~dvi~~~  203 (524)
                         ..+..+....+|+.|+++|+.+. +.|+...++.+.+.+.++++++++.+...  .++++|+.+.+...+.++++..
T Consensus        78 ~~~~~~~~~l~~~~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~d~~~~~~~~~~~~i~~~  156 (404)
T 1jfb_A           78 KQAAKAKPTFVDMDPPEHMHQRSMVE-PTFTPEAVKNLQPYIQRTVDDLLEQMKQKGCANGPVDLVKEFALPVPSYIIYT  156 (404)
T ss_dssp             HHHTTSCCCGGGCCTTHHHHHHTTTG-GGGSHHHHHHHHHHHHHHHHHHHHHHHHHCSTTSCEEHHHHTTTHHHHHHHHH
T ss_pred             cchhcccCcccccCchhHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHH
Confidence               11111222338999999999986 89999999999999999999999999764  2468999999999999999999


Q ss_pred             HhccCCCCCCchHHHHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCC
Q 009821          204 LWGASLRGEDWDAVAIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEG  283 (524)
Q Consensus       204 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~  283 (524)
                      +||.++++       .++.......+.   .     ..+         ..+...+..+.+.+++.+.+++++++.     
T Consensus       157 ~~G~~~~~-------~~~~~~~~~~~~---~-----~~~---------~~~~~~~~~~~~~~~~~~~i~~r~~~~-----  207 (404)
T 1jfb_A          157 LLGVPFND-------LEYLTQQNAIRT---N-----GSS---------TAREASAANQELLDYLAILVEQRLVEP-----  207 (404)
T ss_dssp             HHTCCGGG-------HHHHHHHHHHHH---C-----TTS---------CHHHHHHHHHHHHHHHHHHHHHHHHSC-----
T ss_pred             HcCCCHHH-------HHHHHHHHHHHh---c-----cCc---------chHHHHHHHHHHHHHHHHHHHHHHhCC-----
Confidence            99987642       112222111110   0     001         124455667788888888888776532     


Q ss_pred             CCcccHHHHHHHHhhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCccccc
Q 009821          284 KSSKDFLQTLLELQQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEF  363 (524)
Q Consensus       284 ~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~  363 (524)
                        ..|+++.+++...+ +..++++++.+++. .+++||+|||+++++|++++|++||++|+|+|+|              
T Consensus       208 --~~d~l~~ll~~~~~-~~~l~~~ei~~~~~-~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~~--------------  269 (404)
T 1jfb_A          208 --KDDIISKLCTEQVK-PGNIDKSDAVQIAF-LLLVAGNATMVNMIALGVATLAQHPDQLAQLKAN--------------  269 (404)
T ss_dssp             --CSSHHHHHHHHTTT-TTSSCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHC--------------
T ss_pred             --CCcHHHHHHHhhcc-CCCCCHHHHHHHHH-HHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHhC--------------
Confidence              36899999976532 34689999999998 9999999999999999999999999999999982              


Q ss_pred             ccCCChhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCc
Q 009821          364 HLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGD  443 (524)
Q Consensus       364 ~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~  443 (524)
                          .+|++|||+|+||++|+++..++|.+.+|++++||.||||+.|.++.+++||||++|+||++||||||+..     
T Consensus       270 ----~~yl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeRf~~~-----  340 (404)
T 1jfb_A          270 ----PSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKWPP-----  340 (404)
T ss_dssp             ----GGGHHHHHHHHHHHSCSCCSCCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCCCS-----
T ss_pred             ----hHhHHHHHHHHHhhCCCccccceeeeCCCeeECCEEECCCCEEEeCHHhhCCCchhCCChhhcCCCCCCCC-----
Confidence                36999999999999999996689999999999999999999999999999999999999999999998742     


Q ss_pred             ccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhc-eeeCCCC
Q 009821          444 FRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLF-EWSLPEG  489 (524)
Q Consensus       444 ~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~  489 (524)
                           ..++|||+|+|.|+|++||++|++++++.|+++| ++++.++
T Consensus       341 -----~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~  382 (404)
T 1jfb_A          341 -----QDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAVP  382 (404)
T ss_dssp             -----SCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCTTCEESSC
T ss_pred             -----CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHCCCceecCC
Confidence                 2499999999999999999999999999999999 7998643


No 33 
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=100.00  E-value=1.2e-61  Score=473.99  Aligned_cols=401  Identities=17%  Similarity=0.206  Sum_probs=307.4

Q ss_pred             CCCCCCCCCCceecccccCC-----CChhHHHHHHHHHhCCeEEEec-CCeeEEEeCCHHHHHHHHHhccccccCCCc-c
Q 009821           52 PPLPPGPRALPLVGNILSAE-----PNLHRYFTKLSQIYGPIFKFYL-GRKLCIVIGSPSLAKQVLKEHDVVFANRDP-S  124 (524)
Q Consensus        52 ~~~ppgp~~~p~iG~~~~~~-----~~~~~~~~~~~~kyG~i~~~~~-g~~~~vvv~dp~~i~~il~~~~~~~~~~~~-~  124 (524)
                      .++|||     ++|++....     .+++..+.++++ ||||+++++ |+.++++|++|+.+++++++++ .|++++. .
T Consensus         5 ~~~pp~-----~~g~l~~~~~~~~~~~p~~~~~~l~~-~gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~-~fs~r~~~~   77 (428)
T 1cpt_A            5 ATIPEH-----IARTVILPQGYADDEVIYPAFKWLRD-EQPLAMAHIEGYDPMWIATKHADVMQIGKQPG-LFSNAEGSE   77 (428)
T ss_dssp             CCSCHH-----HHHHHHSSGGGGCHHHHHHHHHHHHH-HCSEEEECCTTSCCEEEECSHHHHHHHHHCTT-TEESSSSCS
T ss_pred             cccchh-----hhcccCChhhhcccCCccHHHHHHHH-hCCeeeccccCCCCeEEEccHHHHHHHHcCch-hccCccccc
Confidence            346777     899866542     457888988866 799999998 6789999999999999998764 5777654 2


Q ss_pred             cch---h---h---hc-----cCCcccccCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehhH
Q 009821          125 AAA---S---V---LT-----YGGKSIGASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVGE  190 (524)
Q Consensus       125 ~~~---~---~---~~-----~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~  190 (524)
                      ...   .   .   .+     ..+....+|+.|+++|+.+. +.|+...++.+.+.+.++++++++.+.+ .++++|+..
T Consensus        78 ~~~~~~~~~~~~~~~g~~~~~~~~l~~~~g~~~~~~Rr~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~-~~~~~d~~~  155 (428)
T 1cpt_A           78 ILYDQNNEAFMRSISGGCPHVIDSLTSMDPPTHTAYRGLTL-NWFQPASIRKLEENIRRIAQASVQRLLD-FDGECDFMT  155 (428)
T ss_dssp             SCCCHHHHHHHHHHTTTSSCSSCCGGGCCTTHHHHHHHHHH-TTSSHHHHGGGHHHHHHHHHHHHHHHHT-SSSEEEHHH
T ss_pred             cCCcccccchhccccccccccccccccCChHHHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHHHH-hCCCeehHH
Confidence            211   1   1   21     01222338999999999996 8999999999999999999999999976 236799975


Q ss_pred             -HHHHHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHH
Q 009821          191 -LMFLTSLDVATRMLWGASLRGEDWDAVAIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFES  269 (524)
Q Consensus       191 -~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~  269 (524)
                       +...+++|+|+++ ||.++++.      ..+......+.....  .....+|++..+. ....++..+..+.+.+++.+
T Consensus       156 ~~~~~~~~~vi~~~-fG~~~~~~------~~~~~~~~~~~~~~~--~~~~~~P~l~~~~-~~~~~~~~~~~~~~~~~~~~  225 (428)
T 1cpt_A          156 DCALYYPLHVVMTA-LGVPEDDE------PLMLKLTQDFFGVHE--PDEQAVAAPRQSA-DEAARRFHETIATFYDYFNG  225 (428)
T ss_dssp             HTTTTHHHHHHHHH-HTCCGGGH------HHHHHHHHTTTCC-------------------CHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhhHHHHHHHH-cCCCHhHH------HHHHHHHHHHHhccc--ccccccccccccc-hhhHHHHHHHHHHHHHHHHH
Confidence             4567999999999 99876421      233333222211100  1112334443221 12235666778888999999


Q ss_pred             hhccccCCCCCCCCCCcccHHHHHHHHhhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHH
Q 009821          270 LLRPGQSGQDMNEGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNE  349 (524)
Q Consensus       270 ~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~E  349 (524)
                      .+++++++       ...|+++.|++... ++..++++++.+++. .+++||+|||+++++|++++|++||++|+|+++|
T Consensus       226 ~i~~r~~~-------~~~dll~~ll~~~~-~~~~ls~~ei~~~~~-~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E  296 (428)
T 1cpt_A          226 FTVDRRSC-------PKDDVMSLLANSKL-DGNYIDDKYINAYYV-AIATAGHDTTSSSSGGAIIGLSRNPEQLALAKSD  296 (428)
T ss_dssp             HHHHHTTS-------CCSSHHHHHHHCBS-SSSBCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHC
T ss_pred             HHHHHHcC-------CCCcHHHHHHhccc-cCCCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHh
Confidence            99887653       23689999998754 344689999999999 9999999999999999999999999999999999


Q ss_pred             HHHhhcCCCcccccccCCChhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCC
Q 009821          350 LEQVVARDSVVEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQD  429 (524)
Q Consensus       350 i~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~  429 (524)
                      ++                  |++|||+|+||++|+++. ++|.+.+|++++||.||||+.|.++.+++||||++|+||++
T Consensus       297 ~~------------------~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~  357 (428)
T 1cpt_A          297 PA------------------LIPRLVDEAVRWTAPVKS-FMRTALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNPDE  357 (428)
T ss_dssp             GG------------------GHHHHHHHHHHHHCCBCC-CEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCSSTTS
T ss_pred             HH------------------HHHHHHHHHHHhCCcccc-cceeeCCCeeECCEEECCCCEEEeCHHHhCCChhhCCChhh
Confidence            74                  899999999999999996 78999999999999999999999999999999999999999


Q ss_pred             CCCCccccccCCCcccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhce-eeCCCCCCCCcccccccccccCCCc
Q 009821          430 FQPDRFLEDVKIGDFRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFE-WSLPEGTKFDLSDKLLMALKKSEPL  508 (524)
Q Consensus       430 F~PeR~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~  508 (524)
                      ||||||..            .++|||+|+|.|+|++||++|++++++.|+++|+ +++... . .+.  .........++
T Consensus       358 F~PeR~~~------------~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~-~-~~~--~~~~~~~~~~l  421 (428)
T 1cpt_A          358 FDITRFPN------------RHLGFGWGAHMCLGQHLAKLEMKIFFEELLPKLKSVELSGP-P-RLV--ATNFVGGPKNV  421 (428)
T ss_dssp             CCTTCCSC------------CCCTTCCSTTCCTTHHHHHHHHHHHHHHHGGGEEEEEESSC-C-EEC--CCSSBCSEEEC
T ss_pred             cCCCCCCC------------CCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCceeCCC-c-ccc--cCccccCccee
Confidence            99999841            3899999999999999999999999999999997 787632 1 221  12223334567


Q ss_pred             eeeeecC
Q 009821          509 VVIPTPR  515 (524)
Q Consensus       509 ~v~~~~r  515 (524)
                      +|+++||
T Consensus       422 pv~~~p~  428 (428)
T 1cpt_A          422 PIRFTKA  428 (428)
T ss_dssp             EEEEEEC
T ss_pred             eEEeeCC
Confidence            8888765


No 34 
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=100.00  E-value=1.2e-60  Score=463.25  Aligned_cols=379  Identities=17%  Similarity=0.219  Sum_probs=303.4

Q ss_pred             CCCChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCcccch-----hhh--ccCCcccccCCc
Q 009821           70 AEPNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAAA-----SVL--TYGGKSIGASPE  142 (524)
Q Consensus        70 ~~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~-----~~~--~~~~~~~~~~~~  142 (524)
                      +..+++.++.++ ++|||||++++++.+.++|+||+.+++++.++.  |++++.....     ...  ...+....+|+.
T Consensus        18 ~~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~   94 (411)
T 3a4g_A           18 FWQNPHPAYAAL-RAEDPVRKLALPDGPVWLLTRYADVREAFVDPR--LSKDWRHTLPEDQRADMPATPTPMMILMDPPD   94 (411)
T ss_dssp             GTTCCHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHTCTT--EESCGGGGSCGGGCTTCCSCSSCCGGGCCTTH
T ss_pred             hhcCchHHHHHH-HhcCCeeeccCCCCCEEEEecHHHHHHHHhCCC--cccccccccccccccccCcccccccccCCchH
Confidence            456889999999 999999999999999999999999999998764  6665432210     111  112222238999


Q ss_pred             hHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehh-HHHHHHHHHHHHHHHhccCCCCCCchHHHHHH
Q 009821          143 WPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVG-ELMFLTSLDVATRMLWGASLRGEDWDAVAIQF  221 (524)
Q Consensus       143 w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~-~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~  221 (524)
                      |+++|+.+. +.|+...++.+.+.+.+.++++++.+.+  ++++|+. ++...+++++++.+ ||.++++      ...+
T Consensus        95 h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~--~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~------~~~~  164 (411)
T 3a4g_A           95 HTRLRKLVG-RSFTVRRMNELEPRITEIADGLLAGLPT--DGPVDLMREYAFQIPVQVICEL-LGVPAED------RDDF  164 (411)
T ss_dssp             HHHHHHHHH-TTCCHHHHHHHHHHHHHHHHHHHHHSCS--SSCEEHHHHTTTTHHHHHHHHH-HTCCGGG------HHHH
T ss_pred             HHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHHHh--cCCccHHHHHHHHhHHHHHHHH-hCCCHHH------HHHH
Confidence            999999997 8999999999999999999999999875  3679996 45578999999975 8987642      1234


Q ss_pred             HHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcccHHHHHHHHhhcCC
Q 009821          222 REVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSSKDFLQTLLELQQQGD  301 (524)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~  301 (524)
                      ......++.    .     .|      .    ++..+..+.+.+++.+.+++++++.       ..|+++.+++...+++
T Consensus       165 ~~~~~~~~~----~-----~p------~----~~~~~~~~~~~~~~~~~i~~r~~~~-------~~d~l~~ll~~~~~~~  218 (411)
T 3a4g_A          165 SAWSSVLVD----D-----SP------A----DDKNAAMGKLHGYLSDLLERKRTEP-------DDALLSSLLAVSDEDG  218 (411)
T ss_dssp             HHHHHHHTT----S-----SC------T----TTHHHHHHHHHHHHHHHHHHHHHSC-------CSSHHHHHHHCCCTTC
T ss_pred             HHHHHHHhc----c-----CC------H----HHHHHHHHHHHHHHHHHHHHHHhCC-------CCCHHHHHHHhhccCC
Confidence            333332211    0     11      0    1334566677888888888776531       3589999998754234


Q ss_pred             CCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcccccccCCChhHHHHHHhhhcC
Q 009821          302 YSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLPYLEAIVKETLRL  381 (524)
Q Consensus       302 ~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl  381 (524)
                      ..++++++.+++. .+++||+|||+++++|++++|++||++|+|+++|++                  |++|||+|+||+
T Consensus       219 ~~ls~~ei~~~~~-~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl  279 (411)
T 3a4g_A          219 DRLSQEELVAMAM-LLLIAGHETTVNLIGNGVLALLTHPDQRKLLAEDPS------------------LISSAVEEFLRF  279 (411)
T ss_dssp             CCCCHHHHHHHHH-HHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCGG------------------GHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHH-HHHHhchhhHHHHHHHHHHHHHhCHHHHHHHhcCHH------------------HHHHHHHHHHHh
Confidence            5689999999998 999999999999999999999999999999999863                  899999999999


Q ss_pred             CCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCcccCCccceeecCCCCCCC
Q 009821          382 HPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGDFRGNNFNYLPFGSGRRIC  461 (524)
Q Consensus       382 ~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~~~~~~~~~pFg~G~r~C  461 (524)
                      +|+++..++|.+.+|++++||.||+|+.|.++.+++||||++|+||++||||||.            ..++|||+|+|.|
T Consensus       280 ~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~------------~~~l~FG~G~r~C  347 (411)
T 3a4g_A          280 DSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRLDITRDA------------SGGVFFGHGIHFC  347 (411)
T ss_dssp             TCSBCBCCCEEESSCEEETTEEECTTCEEEEBHHHHTTCTTTSSSTTSCCTTSCC------------TTCCTTCCSTTCC
T ss_pred             cccccCCceeEeCCCEEECCEEECCCCEEEeChhhhCCChhhcCCccccCCCCCC------------CCCCCCCCCCccC
Confidence            9999955899999999999999999999999999999999999999999999983            2489999999999


Q ss_pred             CCHHHHHHHHHHHHHHHhhhc-eeeCCCC-CCCCcccccccccccCCCceeeeecCCCccc
Q 009821          462 PGIPLAEKIVPHVLANLLHLF-EWSLPEG-TKFDLSDKLLMALKKSEPLVVIPTPRSLSAL  520 (524)
Q Consensus       462 ~G~~~A~~e~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~r~~~~~  520 (524)
                      ||++||.+|++++++.|+++| ++++.++ .++.+..  ..+.....+++|++++|++..-
T Consensus       348 ~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~--~~~~~~~~~lpv~~~~r~~~~~  406 (411)
T 3a4g_A          348 LGAQLARLEGRVAIGRLFADRPELALAVGLDELVYRE--STLVRGLSRMPVTMGPRSALEH  406 (411)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCC--CTTBCCBSCCEEECCCCCC---
T ss_pred             CCHHHHHHHHHHHHHHHHHhCCCcEECCCcccccccc--CccccCcceeEEEecCcchhhc
Confidence            999999999999999999999 6998754 2333322  3445566789999999976543


No 35 
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=100.00  E-value=1.5e-60  Score=463.58  Aligned_cols=368  Identities=17%  Similarity=0.211  Sum_probs=296.8

Q ss_pred             CCCCCCCCCCceecccccCCCChhHHHHHHHHHh-CCeEEEec-CCeeEEEeCCHHHHHHHHHhccccccCCCcccchhh
Q 009821           52 PPLPPGPRALPLVGNILSAEPNLHRYFTKLSQIY-GPIFKFYL-GRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAAASV  129 (524)
Q Consensus        52 ~~~ppgp~~~p~iG~~~~~~~~~~~~~~~~~~ky-G~i~~~~~-g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~~~  129 (524)
                      ++.||+|+.+|.+.....+..+++..+.++ ++| ||||++++ |+.++++|+||+.+++++.++.  +++++.......
T Consensus         4 ~~~~~~~~~~P~~~~~~~~~~~p~~~~~~l-~~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~   80 (412)
T 2zbx_A            4 TATTPQTTDAPAFPSNRSCPYQLPDGYAQL-RDTPGPLHRVTLYDGRQAWVVTKHEAARKLLGDPR--LSSNRTDDNFPA   80 (412)
T ss_dssp             ----CCCCSSCBSSCCCSSTTSCCHHHHHH-HHSSSSEEEEECTTSCEEEEECSHHHHHHHHTCTT--EECCTTSTTSCC
T ss_pred             CCCCCCCCCCCCCCCCchhccChHHHHHHH-HhcCCCeEeeccCCCCcEEEEecHHHHHHHHcCcc--cccCcccccccc
Confidence            456778888887643344667899999999 788 99999997 8889999999999999998754  334332111100


Q ss_pred             -------h--ccCCcccccCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehhHHHH-HHHHHH
Q 009821          130 -------L--TYGGKSIGASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVGELMF-LTSLDV  199 (524)
Q Consensus       130 -------~--~~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~~-~~~~dv  199 (524)
                             .  ..++....+|+.|+++|+.+. +.|+...++.+.+.+.+.++++++.+.. .++++|+.+.+. .+++++
T Consensus        81 ~~~~~~~~~~~~~~l~~~~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~-~g~~~d~~~~~~~~~~~~v  158 (412)
T 2zbx_A           81 TSPRFEAVRESPQAFIGLDPPEHGTRRRMTI-SEFTVKRIKGMRPEVEEVVHGFLDEMLA-AGPTADLVSQFALPVPSMV  158 (412)
T ss_dssp             CSGGGC----CCCCGGGCCTTHHHHHHTTTG-GGGSHHHHHHHHHHHHHHHHHHHHHHHH-HCSCEEHHHHTTTHHHHHH
T ss_pred             cccccccccccccccccCCcHHHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCccHHHHHHHHHHHHH
Confidence                   0  112222338999999999997 8899999999999999999999999875 456899998776 589999


Q ss_pred             HHHHHhccCCCCCCchHHHHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCC
Q 009821          200 ATRMLWGASLRGEDWDAVAIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQD  279 (524)
Q Consensus       200 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~  279 (524)
                      ++. +||.+..+      ...+...+..++..         .+        .  ++..+..+.+.+++.+.+++++++. 
T Consensus       159 i~~-~~G~~~~~------~~~~~~~~~~~~~~---------~~--------~--~~~~~~~~~~~~~~~~~i~~r~~~~-  211 (412)
T 2zbx_A          159 ICR-LLGVPYAD------HEFFQDASKRLVQS---------TD--------A--QSALTARNDLAGYLDGLITQFQTEP-  211 (412)
T ss_dssp             HHH-HHTCCGGG------HHHHHHHHHHHHHC---------SS--------H--HHHHHHHHHHHHHHHHHHHHHHHSC-
T ss_pred             HHH-HcCCCHHH------HHHHHHHHHHHhcc---------Cc--------H--HHHHHHHHHHHHHHHHHHHHHHhCC-
Confidence            997 79987532      13344444433321         00        1  4455667778888888888776532 


Q ss_pred             CCCCCCcccHHHHHHHHhhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCc
Q 009821          280 MNEGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSV  359 (524)
Q Consensus       280 ~~~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~  359 (524)
                            ..|+++.+++... ++..++++++.+++. .+++||+|||+++++|++++|++||++|+|+++|++        
T Consensus       212 ------~~d~l~~ll~~~~-~~~~ls~~ei~~~~~-~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~--------  275 (412)
T 2zbx_A          212 ------GAGLVGALVADQL-ANGEIDREELISTAM-LLLIAGHETTASMTSLSVITLLDHPEQYAALRADRS--------  275 (412)
T ss_dssp             ------CSSHHHHHHHTTT-TTTSSCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG--------
T ss_pred             ------CCCHHHHHHHhcc-cCCCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhChH--------
Confidence                  2689999998754 245689999999999 999999999999999999999999999999999853        


Q ss_pred             ccccccCCChhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCcccccc
Q 009821          360 VEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDV  439 (524)
Q Consensus       360 ~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~  439 (524)
                                |++|||+|+||++|+++..++|.+.+|++++||.||||+.|.++.+++||||++|+||++||||||.   
T Consensus       276 ----------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~---  342 (412)
T 2zbx_A          276 ----------LVPGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALDIHRSA---  342 (412)
T ss_dssp             ----------GHHHHHHHHHHHHCCCGGGCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC---
T ss_pred             ----------hHHHHHHHHHHhCCccccccceeeCCCeEECCEEECCCCEEEeChhhhcCCccccCCccccCCCCCC---
Confidence                      7999999999999999966899999999999999999999999999999999999999999999972   


Q ss_pred             CCCcccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhc-eeeCCCC
Q 009821          440 KIGDFRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLF-EWSLPEG  489 (524)
Q Consensus       440 ~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~  489 (524)
                               ..++|||+|+|.|+|++||++|++++++.|+++| ++++.++
T Consensus       343 ---------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~  384 (412)
T 2zbx_A          343 ---------RHHLAFGFGVHQCLGQNLARLELEVILNALMDRVPTLRLAVP  384 (412)
T ss_dssp             ---------TTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSC
T ss_pred             ---------CCccCCCCCCCcCccHHHHHHHHHHHHHHHHHhcCcccccCC
Confidence                     2589999999999999999999999999999999 7998754


No 36 
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=100.00  E-value=5.2e-61  Score=466.96  Aligned_cols=393  Identities=17%  Similarity=0.258  Sum_probs=303.2

Q ss_pred             CCCCCCCCCCCCCCCCceecccccCCCChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCccc
Q 009821           46 KPTRSTPPLPPGPRALPLVGNILSAEPNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSA  125 (524)
Q Consensus        46 ~~~~~~~~~ppgp~~~p~iG~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~  125 (524)
                      ++..++.+.+|||..          ..+++.++.++++ ||||   +.++.+.++++||+.+++++.+++ .|++++...
T Consensus        12 r~~~~pl~~~PGp~~----------~~~p~~~~~~l~~-~gpv---~~~~~~~~vv~~~~~v~~vl~~~~-~f~~~~~~~   76 (411)
T 2jjn_A           12 RRTLTTIDEVPGMAD----------ETALLDWLGTMRE-KQPV---WQDRYGVWHVFRHADVQTVLRDTA-TFSSDPTRV   76 (411)
T ss_dssp             -----CCCSCCCSSC----------HHHHHHHHHHHHH-HCSE---EECTTSCEEECSHHHHHHHHHCTT-TEESCGGGG
T ss_pred             hcccCCCCCCCCccc----------ccChHHHHHHHHH-hCCc---ccCCCCeEEECCHHHHHHHHcCcc-cccCccccc
Confidence            344567778888873          2468889999975 9998   566667899999999999998764 577665322


Q ss_pred             chhh-hccCCcccccCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehh-HHHHHHHHHHHHHH
Q 009821          126 AASV-LTYGGKSIGASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVG-ELMFLTSLDVATRM  203 (524)
Q Consensus       126 ~~~~-~~~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~-~~~~~~~~dvi~~~  203 (524)
                      .... ....+....+|+.|+++|+.+. +.|+...++.+.+.+.+.++++++.  .  ++++|+. ++...+++|+++++
T Consensus        77 ~~~~~~~~~~~~~~~g~~~~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~--~--~~~~d~~~~~~~~~~~~vi~~~  151 (411)
T 2jjn_A           77 IEGASPTPGMIHEIDPPEHRALRKVVS-SAFTPRTISDLEPRIRDVTRSLLAD--A--GESFDLVDVLAFPLPVTIVAEL  151 (411)
T ss_dssp             STTCCCCTTCGGGCCTTHHHHHHHHHH-HHSCHHHHHTTHHHHHHHHHHHHHT--S--CSEEEHHHHTTTHHHHHHHHHH
T ss_pred             CCcccccccccccCCchHHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHhc--C--CCceeHHHHHHHHHHHHHHHHH
Confidence            1111 1111222338999999999997 8899999999999999999999987  2  4589998 45568999999998


Q ss_pred             HhccCCCCCCchHHHHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCC
Q 009821          204 LWGASLRGEDWDAVAIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEG  283 (524)
Q Consensus       204 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~  283 (524)
                       ||.+..+.+      .+......+......    .+.+       +...++..+..+.+.+++.+.+++++++      
T Consensus       152 -fG~~~~~~~------~~~~~~~~~~~~~~~----~~~~-------p~~~~~~~~~~~~~~~~~~~~i~~r~~~------  207 (411)
T 2jjn_A          152 -LGLPPMDHE------QFGDWSGALVDIQMD----DPTD-------PALAERIADVLNPLTAYLKARCAERRAD------  207 (411)
T ss_dssp             -HTCCSCCCS------TTCCHHHHHHHSCCS----CTTC-------HHHHHHHHHHHHHHHHHHHHHHHHHHHS------
T ss_pred             -cCCCHHHHH------HHHHHHHHHHhccCc----cccc-------hHHHHHHHHHHHHHHHHHHHHHHHHHhC------
Confidence             999875432      122222233221110    0110       1223456677788888898888887653      


Q ss_pred             CCcccHHHHHHHHhhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCccccc
Q 009821          284 KSSKDFLQTLLELQQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEF  363 (524)
Q Consensus       284 ~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~  363 (524)
                       ...|+++.|++... ++..++++++.+++. .+++||+|||+++++|++++|++||++|+|+++|++            
T Consensus       208 -~~~d~l~~ll~~~~-~~~~l~~~el~~~~~-~~~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------  272 (411)
T 2jjn_A          208 -PGDDLISRLVLAEV-DGRALDDEEAANFST-ALLLAGHITTTVLLGNIVRTLDEHPAHWDAAAEDPG------------  272 (411)
T ss_dssp             -CCSSHHHHHHHCCB-TTBCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHSTHHHHHHHHCGG------------
T ss_pred             -CCCCHHHHHHhccc-CCCCCCHHHHHHHHH-HHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------
Confidence             23689999998754 345689999999999 999999999999999999999999999999999975            


Q ss_pred             ccCCChhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCc
Q 009821          364 HLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGD  443 (524)
Q Consensus       364 ~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~  443 (524)
                            |++|||+|+||++|+++. ++|.+.+|++++||.||||+.|.++.+++||||++|+||++||||||.+      
T Consensus       273 ------~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~------  339 (411)
T 2jjn_A          273 ------RIPAIVEEVLRYRPPFPQ-MQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFDPSRKSG------  339 (411)
T ss_dssp             ------GHHHHHHHHHHHSCSSCE-EEEEESSCEEETTEEECSSCEEEEEHHHHHTCTTTSSSTTSCCTTCCCS------
T ss_pred             ------hHHHHHHHHhhhCCCcCC-cceEECCCeEECCEEECCCCEEEechhhhCCChhhcCCccccCCCCCCC------
Confidence                  899999999999999996 7899999999999999999999999999999999999999999999752      


Q ss_pred             ccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhce-eeCCCCCCCCcccccccccccCCCceeeeecCC
Q 009821          444 FRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFE-WSLPEGTKFDLSDKLLMALKKSEPLVVIPTPRS  516 (524)
Q Consensus       444 ~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  516 (524)
                          ...++|||+|+|.|+|++||.+|++++++.|+++|+ ++++++.  ++......+.....+++|+++++.
T Consensus       340 ----~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~~lpv~~~~~~  407 (411)
T 2jjn_A          340 ----GAAQLSFGHGVHFCLGAPLARLENRVALEEIIARFGRLTVDRDD--ERLRHFEQIVLGTRHLPVLAGSSP  407 (411)
T ss_dssp             ----SCCCGGGCSSTTCCTTHHHHHHHHHHHHHHHHHHHSCCEECCSS--CCCCBCCSSSSSBSCCEEECSCCT
T ss_pred             ----CCCccCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCcceECCCC--ceeccccccccCcceeEEEecCCC
Confidence                125899999999999999999999999999999995 9987432  221122334445566777776654


No 37 
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=100.00  E-value=7.1e-61  Score=465.20  Aligned_cols=394  Identities=13%  Similarity=0.128  Sum_probs=309.4

Q ss_pred             CCCCCCCCCCCCCCcee--ccccc-----CCCChhHHHHHHHHHhC--CeEEEe-cCCeeEEEeCCHHHHHHHHHhcccc
Q 009821           48 TRSTPPLPPGPRALPLV--GNILS-----AEPNLHRYFTKLSQIYG--PIFKFY-LGRKLCIVIGSPSLAKQVLKEHDVV  117 (524)
Q Consensus        48 ~~~~~~~ppgp~~~p~i--G~~~~-----~~~~~~~~~~~~~~kyG--~i~~~~-~g~~~~vvv~dp~~i~~il~~~~~~  117 (524)
                      ..++..+||||...|..  +.+-.     +..+++.++.+++ +||  +||+++ +|  +.++++||+.+++++++++ .
T Consensus         6 ~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~p~~~~~~l~-~~G~~pv~~~~~~g--~~vvv~~~~~v~~vl~~~~-~   81 (415)
T 2zwu_A            6 IQSNANLAPLPPHVPEHLVFDFDMYNPSNLSAGVQEAWAVLQ-ESNVPDLVWTRCNG--GHWIATRGQLIREAYEDYR-H   81 (415)
T ss_dssp             -----CCCCCCTTSCGGGBCCCCTTSCTTGGGCHHHHHHGGG-STTSCSEEEECGGG--CEEEECSHHHHHHHHHCTT-T
T ss_pred             ccCccccCCCCCCCCcccccccCcCChhhcccChHHHHHHHH-hcCCCCeEEecCCC--CeEEEcCHHHHHHHHcCcc-c
Confidence            34556789999988864  43211     2346888999995 899  999998 55  5899999999999997654 5


Q ss_pred             ccCCC-cccchhhhccCC-cccccCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehhHH-HHH
Q 009821          118 FANRD-PSAAASVLTYGG-KSIGASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVGEL-MFL  194 (524)
Q Consensus       118 ~~~~~-~~~~~~~~~~~~-~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~-~~~  194 (524)
                      |++++ ...........+ ....+|+.|+++|+.+. +.|+...++.+.+.+.++++++++.+..  ++++|+.+. ...
T Consensus        82 f~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~--~~~~d~~~~~~~~  158 (415)
T 2zwu_A           82 FSSECPFIPREAGEAYDFIPTSMDPPEQRQFRALAN-QVVGMPVVDKLENRIQELACSLIESLRP--QGQCNFTEDYAEP  158 (415)
T ss_dssp             EETTSCSSSHHHHHHCCCTTTTCCTTTTHHHHHHHH-HHHSHHHHHHHHHHHHHHHHHHHHHHGG--GTEEEHHHHTTTH
T ss_pred             cCCCcccCCCCccccccccCccCCCcHHHHHHHHHH-hhhCHHHHHHHHHHHHHHHHHHHHHHHh--cCCccHHHHHHHH
Confidence            77765 221111111122 22338999999999997 8899999999999999999999999976  247999975 478


Q ss_pred             HHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccc
Q 009821          195 TSLDVATRMLWGASLRGEDWDAVAIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPG  274 (524)
Q Consensus       195 ~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~  274 (524)
                      +++++++++ ||.++.+.      ..+......++..        ..|.           +..+..+.+.+++.+.++++
T Consensus       159 ~~~~vi~~~-~G~~~~~~------~~~~~~~~~~~~~--------~~P~-----------~~~~~~~~~~~~~~~~i~~r  212 (415)
T 2zwu_A          159 FPIRIFMLL-AGLPEEDI------PHLKYLTDQMTRP--------DGSM-----------TFAEAKEALYDYLIPIIEQR  212 (415)
T ss_dssp             HHHHHHHHH-HTCCGGGH------HHHHHHHHHHHSC--------CSSS-----------CHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHH-cCCCHHHH------HHHHHHHHHHHhc--------cCHH-----------HHHHHHHHHHHHHHHHHHHH
Confidence            999999999 99876421      2344444433221        0121           23455667777888888777


Q ss_pred             cCCCCCCCCCCcccHHHHHHHHhhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhh
Q 009821          275 QSGQDMNEGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVV  354 (524)
Q Consensus       275 ~~~~~~~~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~  354 (524)
                      +++       ...|+++.|++... ++..++++++.+++. .+++||+|||+++++|++++|++||++|+|+++|++   
T Consensus       213 ~~~-------~~~dll~~ll~~~~-~~~~l~~~~i~~~~~-~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~---  280 (415)
T 2zwu_A          213 RQK-------PGTDAISIVANGQV-NGRPITSDEAKRMCG-LLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERPE---  280 (415)
T ss_dssp             HHS-------CCSSHHHHHHTCEE-TTEECCHHHHHHHHH-HHHHHHHHTHHHHHHHHHHHHHHCHHHHHHHHHCGG---
T ss_pred             HhC-------CCCCHHHHHHHhhh-cCCCCCHHHHHHHHH-HHHHHhHhHHHHHHHHHHHHHHhCHHHHHHHHhCHH---
Confidence            653       23689999997643 234689999999998 999999999999999999999999999999999964   


Q ss_pred             cCCCcccccccCCChhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCc
Q 009821          355 ARDSVVEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDR  434 (524)
Q Consensus       355 ~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR  434 (524)
                                     |++|||+|+||++|+++. + |.+.+|++++||.||||+.|.++.+++||||++|+||++|||||
T Consensus       281 ---------------~l~a~i~E~lRl~p~~~~-~-R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR  343 (415)
T 2zwu_A          281 ---------------RIPAACEELLRRFSLVAD-G-RILTSDYEFHGVQLKKGDQILLPQMLSGLDERENACPMHVDFSR  343 (415)
T ss_dssp             ---------------GHHHHHHHHHHHTCCBCC-E-EEESSCEEETTEEECTTCEEECCHHHHHHCTTTSSSTTSCCTTC
T ss_pred             ---------------HHHHHHHHHHhhcCCcCC-c-eeeCCCEEECCEEECCCCEEEeCchhhCCCchhCCCccccCCCC
Confidence                           899999999999999996 7 99999999999999999999999999999999999999999999


Q ss_pred             cccccCCCcccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhce-eeCCCCCCCCcccccccccccCCCceeeee
Q 009821          435 FLEDVKIGDFRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFE-WSLPEGTKFDLSDKLLMALKKSEPLVVIPT  513 (524)
Q Consensus       435 ~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  513 (524)
                      |-            ..++|||+|+|.|+|++||.+|++++++.|+++|+ +++.++.  ++. ....+.....+++|+++
T Consensus       344 ~~------------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~-~~~~~~~~~~~lpv~~~  408 (415)
T 2zwu_A          344 QK------------VSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGA--QIQ-HKSGIVSGVQALPLVWD  408 (415)
T ss_dssp             SS------------CCCCTTCCGGGCCSSHHHHHHHHHHHHHHHHHHCCSCEECTTC--CCC-EECSSBCEESCCEEECC
T ss_pred             CC------------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCCCEECCCc--ccc-cCCccccCcceeEEEEe
Confidence            52            25899999999999999999999999999999998 9987642  221 22344455677999999


Q ss_pred             cCCCc
Q 009821          514 PRSLS  518 (524)
Q Consensus       514 ~r~~~  518 (524)
                      +|++.
T Consensus       409 ~r~~~  413 (415)
T 2zwu_A          409 PATTK  413 (415)
T ss_dssp             GGGCC
T ss_pred             cCCCC
Confidence            98764


No 38 
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=100.00  E-value=1.8e-60  Score=461.51  Aligned_cols=376  Identities=16%  Similarity=0.228  Sum_probs=302.0

Q ss_pred             CCCChhHHHHHHHHHhCCeEEEec-CCeeEEEeCCHHHHHHHHHhccccccCCCc--c-cc---hhh-hccCCcccccCC
Q 009821           70 AEPNLHRYFTKLSQIYGPIFKFYL-GRKLCIVIGSPSLAKQVLKEHDVVFANRDP--S-AA---ASV-LTYGGKSIGASP  141 (524)
Q Consensus        70 ~~~~~~~~~~~~~~kyG~i~~~~~-g~~~~vvv~dp~~i~~il~~~~~~~~~~~~--~-~~---~~~-~~~~~~~~~~~~  141 (524)
                      +..+++.++.++ ++||||+++++ |+.+.++++||+.+++++.++.  |++++.  . ..   ... ....+....+|+
T Consensus        17 ~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~   93 (403)
T 3aba_A           17 CPFLPPDGIADI-RAAAPVTRATFTSGHEAWLVTGYEEVRALLRDSS--FSVQVPHALHTQDGVVTQKPGRGSLLWQDEP   93 (403)
T ss_dssp             STTSCCTTHHHH-HHHCSEEEEECTTSCEEEEECCHHHHHHHHHCTT--EESCCSCCTTSSSCCCCCCCCTTCCTTCCTT
T ss_pred             cccChhHHHHHH-HhcCCeeeeccCCCceEEEEcCHHHHHHHHcCCC--cccccccccccccccccccccccccccCCch
Confidence            456788899999 89999999997 8899999999999999998753  655531  1 11   101 111222223899


Q ss_pred             chHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehhHHH-HHHHHHHHHHHHhccCCCCCCchHHHHH
Q 009821          142 EWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVGELM-FLTSLDVATRMLWGASLRGEDWDAVAIQ  220 (524)
Q Consensus       142 ~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~-~~~~~dvi~~~~fG~~~~~~~~~~~~~~  220 (524)
                      .|+++|+.+. +.|+...++.+.+.+.+.++++++.+.+ .++++|+...+ ..+++++++. +||.+..+      ...
T Consensus        94 ~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~-~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~------~~~  164 (403)
T 3aba_A           94 EHTSDRKLLA-KEFTVRRMQALRPNIQRIVDEHLDAIEA-RGGPVDLVKTFANAVPSMVISD-LFGVPVER------RAE  164 (403)
T ss_dssp             HHHHHHHHHH-HHSCHHHHHTTHHHHHHHHHHHHHHHHH-HCSCEEHHHHTTTHHHHHHHHH-HHTCCGGG------HHH
T ss_pred             hHHHHHHHHH-hhcCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCccHHHHHHHHHHHHHHHH-HcCCCHHH------HHH
Confidence            9999999997 8899999999999999999999999974 36789998655 5799999998 79987532      123


Q ss_pred             HHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcccHHHHHHHHhhcC
Q 009821          221 FREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSSKDFLQTLLELQQQG  300 (524)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~  300 (524)
                      +......++.    ..    .+          .++..+..+.+.+++.+.+++++++.       ..|+++.|++... +
T Consensus       165 ~~~~~~~~~~----~~----~~----------p~~~~~~~~~~~~~~~~~i~~r~~~~-------~~dll~~ll~~~~-~  218 (403)
T 3aba_A          165 FQDIAEAMMR----VD----QD----------AAATEAAGMRLGGLLYQLVQERRANP-------GDDLISALITTED-P  218 (403)
T ss_dssp             HHHHHHHHSB----SS----SC----------HHHHHHHHHHHHHHHHHHHHHHHHSC-------CSSHHHHHHTSCC-T
T ss_pred             HHHHHHHHHh----cc----Cc----------HHHHHHHHHHHHHHHHHHHHHHHhCC-------CCCHHHHHHhhcc-C
Confidence            3333332211    00    00          14456677788888888888876542       2589999998654 3


Q ss_pred             CCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcccccccCCChhHHHHHHhhhc
Q 009821          301 DYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLPYLEAIVKETLR  380 (524)
Q Consensus       301 ~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lR  380 (524)
                      +..++++++.+++. .+++||+|||+++++|++++|++||++|+|+++|++                  |++|||+|+||
T Consensus       219 ~~~l~~~ei~~~~~-~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lR  279 (403)
T 3aba_A          219 DGVVDDMFLMNAAG-TLLIAAHDTTACMIGLGTALLLDSPDQLALLREDPS------------------LVGNAVEELLR  279 (403)
T ss_dssp             TCCCSHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG------------------GHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------HHHHHHHHHHh
Confidence            44689999999999 999999999999999999999999999999999853                  79999999999


Q ss_pred             CCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCcccCCccceeecCCCCCC
Q 009821          381 LHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGDFRGNNFNYLPFGSGRRI  460 (524)
Q Consensus       381 l~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~~~~~~~~~pFg~G~r~  460 (524)
                      ++|+++..++|.+.+|++++||.||||+.|.++.+++||||++|+||++||||||.            ..++|||+|+|.
T Consensus       280 l~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~------------~~~l~FG~G~r~  347 (403)
T 3aba_A          280 YLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITRRP------------APHLAFGFGAHQ  347 (403)
T ss_dssp             HHCSCTTCEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC------------CCCSTTCCGGGS
T ss_pred             cCCCcccccceEeCCCeEECCEEECCCCEEEechhhhCCChhhCCCccccCCCCCC------------CCccCCCCCCcc
Confidence            99999955789999999999999999999999999999999999999999999983            248999999999


Q ss_pred             CCCHHHHHHHHHHHHHHHhhhc-eeeCCCC-CCCCcccccccccccCCCceeeeecCC
Q 009821          461 CPGIPLAEKIVPHVLANLLHLF-EWSLPEG-TKFDLSDKLLMALKKSEPLVVIPTPRS  516 (524)
Q Consensus       461 C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~r~  516 (524)
                      |+|++||.+|++++++.|+++| ++++.++ .++.+.  ...+......++|++++|.
T Consensus       348 C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~--~~~~~~~~~~lpv~~~~r~  403 (403)
T 3aba_A          348 CIGQQLARIELQIVFETLFRRLPGLRLAKPVEELRFR--HDMVFYGVHELPVTWHHHH  403 (403)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHSTTCEESSCGGGSCBC--TTBSSCCBSCCEEECCCCC
T ss_pred             CcCHHHHHHHHHHHHHHHHHhCCCceecCCccccccc--cCcccCCcceeEEEecCCC
Confidence            9999999999999999999999 5888754 223332  2344556688999998874


No 39 
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=100.00  E-value=1.5e-60  Score=461.95  Aligned_cols=374  Identities=16%  Similarity=0.131  Sum_probs=300.8

Q ss_pred             cCCCChhHHHHHHHHHh--CCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCcccchhhhccCCcc--cccCCchH
Q 009821           69 SAEPNLHRYFTKLSQIY--GPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAAASVLTYGGKS--IGASPEWP  144 (524)
Q Consensus        69 ~~~~~~~~~~~~~~~ky--G~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~w~  144 (524)
                      .+..+++.++.+++++|  ||||++++++ +.++|+||+.+++++++. ..|++++..........++..  ..+|+.|+
T Consensus        16 ~~~~~p~~~~~~l~~~Y~~Gpv~~~~~~~-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~   93 (398)
T 4fb2_A           16 GPDGTPHAFFEALRDEAETTPIGWSEAYG-GHWVVAGYKEIQAVIQNT-KAFSNKGVTFPRYETGEFELMMAGQDDPVHK   93 (398)
T ss_dssp             CTTSSSHHHHHHHHHHHTTCSEEEECGGG-CEEEECSHHHHHHHHTCC-SSEEGGGCSSSCC----CCCTTTTCCTTHHH
T ss_pred             hhhcChhHHHHHHHhcCCCCCeEEecCCC-CEEEEccHHHHHHHHhCh-hhccCCcccccCCCCcccccCcccCCchHHH
Confidence            34578999999999999  9999999986 589999999999999654 357666543321111112222  23899999


Q ss_pred             HHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehhH-HHHHHHHHHHHHHHhccCCCCCCchHHHHHHHH
Q 009821          145 KLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVGE-LMFLTSLDVATRMLWGASLRGEDWDAVAIQFRE  223 (524)
Q Consensus       145 ~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~-~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~  223 (524)
                      ++|+.+. +.|+...++.+.+.+.+.++++++.+..  +..+|+.. ....++++++++ +||.+...      ...+.+
T Consensus        94 ~~R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~--~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~------~~~~~~  163 (398)
T 4fb2_A           94 KYRQLVA-KPFSPEATDLFTEQLRQSTNDLIDARIE--LGEGDAATWLANEIPARLTAI-LLGLPPED------GDTYRR  163 (398)
T ss_dssp             HHHHHHH-TTTCHHHHHTTHHHHHHHHHHHHHTTTT--TTEEEHCCCCCTTHHHHHHHH-HTTSCGGG------HHHHHH
T ss_pred             HHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHhh--cCCccHHHHHHHHHHHHHHHH-HcCCCHHH------HHHHHH
Confidence            9999996 8999999999999999999999998865  45688754 457899999999 68976532      234444


Q ss_pred             HHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcccHHHHHHHHhhcCCCC
Q 009821          224 VLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSSKDFLQTLLELQQQGDYS  303 (524)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~  303 (524)
                      ....++.           +.        ..++..+..+.+.+++.+.+++++++       ...|+++.+++... ++..
T Consensus       164 ~~~~~~~-----------~~--------~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~d~l~~ll~~~~-~~~~  216 (398)
T 4fb2_A          164 WVWAITH-----------VE--------NPEEGAEIFAELVAHARTLIAERRTN-------PGNDIMSRVIMSKI-DGES  216 (398)
T ss_dssp             HHHHHHH-----------CC--------CHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHHCCB-TTBC
T ss_pred             HHHHHhc-----------CC--------CHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHHccc-CCCC
Confidence            4444432           00        12355667778888888888887653       23699999998765 3346


Q ss_pred             CcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcccccccCCChhHHHHHHhhhcCCC
Q 009821          304 LSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLPYLEAIVKETLRLHP  383 (524)
Q Consensus       304 l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p  383 (524)
                      ++++++.+++. .+++||+|||+++++|++++|++||++|+|+|+|++                  |++|||+|+||++|
T Consensus       217 l~~~~i~~~~~-~l~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p  277 (398)
T 4fb2_A          217 LSEDDLIGFFT-ILLLGGIDNTARFLSSVFWRLAWDIELRRRLIAHPE------------------LIPNAVDELLRFYG  277 (398)
T ss_dssp             CCHHHHHHHHH-HCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GHHHHHHHHHHHHC
T ss_pred             CCHHHHHHHHH-HHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------HHHHHHHHHHHhCC
Confidence            89999999999 999999999999999999999999999999999975                  68899999999999


Q ss_pred             CCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCcccCCccceeecCCCCCCCCC
Q 009821          384 PAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGDFRGNNFNYLPFGSGRRICPG  463 (524)
Q Consensus       384 ~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~~~~~~~~~pFg~G~r~C~G  463 (524)
                      +++  ++|.+.+|++++||.||||+.|.++.+++||||++|+||++||||||.            ..++|||+|+|.|||
T Consensus       278 ~~~--~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~------------~~~~~FG~G~r~C~G  343 (398)
T 4fb2_A          278 PAM--VGRLVTQEVTVGDITMKPGQTAMLWFPIASRDRSAFDSPDNIVIERTP------------NRHLSLGHGIHRCLG  343 (398)
T ss_dssp             CBC--EEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCS------------CCCCTTCCSTTCCTT
T ss_pred             CcC--CCeeeCCCEEECCEEECCCCEEEechHhhcCChhhCCCcCeeCCCCCC------------CCCCCCCCCCcCCCC
Confidence            998  689999999999999999999999999999999999999999999973            258999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhhc-eeeCCCCCCCCcccccccccccCCCceeeeecCCC
Q 009821          464 IPLAEKIVPHVLANLLHLF-EWSLPEGTKFDLSDKLLMALKKSEPLVVIPTPRSL  517 (524)
Q Consensus       464 ~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~  517 (524)
                      ++||.+|++++++.|+++| +++++++.+..+..   ........++|++++|..
T Consensus       344 ~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~---~~~~~~~~lpv~~~~~~~  395 (398)
T 4fb2_A          344 AHLIRVEARVAITEFLKRIPEFSLDPNKECEWLM---GQVAGMLHVPIIFPKGKR  395 (398)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCSCEECTTSCCEEEC---SSBCEEEECEEECCCCCC
T ss_pred             HHHHHHHHHHHHHHHHHhCCCcEECCCCCceecc---ccccccceeEEEEcCCCC
Confidence            9999999999999999999 99998775444332   222233447788877643


No 40 
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=100.00  E-value=7e-60  Score=457.92  Aligned_cols=384  Identities=17%  Similarity=0.235  Sum_probs=302.2

Q ss_pred             CCCCCCCCCceecccccCCCChhHHHHHHHHHhCCeEEEec-CCee-EEEeCCHHHHHHHHHhccccccCCCcccchh--
Q 009821           53 PLPPGPRALPLVGNILSAEPNLHRYFTKLSQIYGPIFKFYL-GRKL-CIVIGSPSLAKQVLKEHDVVFANRDPSAAAS--  128 (524)
Q Consensus        53 ~~ppgp~~~p~iG~~~~~~~~~~~~~~~~~~kyG~i~~~~~-g~~~-~vvv~dp~~i~~il~~~~~~~~~~~~~~~~~--  128 (524)
                      ..+|+|+.+|+.++   ...+++.++.+++ +|||||++++ ++.+ .++|+||+.+++++.++  .|.+++......  
T Consensus         8 ~~~~~~~~~p~~~~---~~~~p~~~~~~l~-~~Gpv~~~~~~~g~~p~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~   81 (406)
T 1s1f_A            8 QAVPPVRDWPAVDL---PGSDFDPVLTELM-REGPVTRISLPNGEGWAWLVTRHDDVRLVTNDP--RFGREAVMDRQVTR   81 (406)
T ss_dssp             CCSCCEEECCCCCC---CTTCCCHHHHHHH-HHCSEEEEECSBSBSCEEEECSHHHHHHHHTCT--TEESTTTTTTTBCB
T ss_pred             hhccCCCCCCCCcc---cccCchHHHHHHH-hcCCeeeeccCCCcccEEEEcCHHHHHHHHcCC--CccCCcCCCCCccc
Confidence            45677777788766   4468899999985 7999999986 5666 99999999999999874  366654322110  


Q ss_pred             --h-h-c-cCCcccccCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehhHHH-HHHHHHHHHH
Q 009821          129 --V-L-T-YGGKSIGASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVGELM-FLTSLDVATR  202 (524)
Q Consensus       129 --~-~-~-~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~-~~~~~dvi~~  202 (524)
                        . . . ..+....+|+.|+++|+.+. +.|+...++.+.+.+.+.++++++.+.. .++++|+...+ ..+++++++.
T Consensus        82 ~~~~~~~~~~~l~~~dg~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~-~~~~~d~~~~~~~~~~~~vi~~  159 (406)
T 1s1f_A           82 LAPHFIPARGAVGFLDPPDHTRLRRSVA-AAFTARGVERVRERSRGMLDELVDAMLR-AGPPADLTEAVLSPFPIAVICE  159 (406)
T ss_dssp             SSSSCSSCTTSGGGCCTTHHHHHHHHHH-HHHSHHHHHHHHHHHHHHHHHHHHHHHH-HCSSEEHHHHTTTHHHHHHHHH
T ss_pred             ccccccccccccccCCchHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCccHHHHHhhHhHHHHHHH
Confidence              0 1 1 12222238999999999997 7899999999999999999999999973 35689988665 5799999998


Q ss_pred             HHhccCCCCCCchHHHHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCC
Q 009821          203 MLWGASLRGEDWDAVAIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNE  282 (524)
Q Consensus       203 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~  282 (524)
                       +||.++++.      ..+......++....        | .         ++..+..+.+.+++.+.+++++++     
T Consensus       160 -~~G~~~~~~------~~~~~~~~~~~~~~~--------~-~---------~~~~~~~~~~~~~~~~~i~~r~~~-----  209 (406)
T 1s1f_A          160 -LMGVPATDR------HSMHTWTQLILSSSH--------G-A---------EVSERAKNEMNAYFSDLIGLRSDS-----  209 (406)
T ss_dssp             -HHTCCGGGH------HHHHHHHHHHHHHHT--------T-C---------CCCHHHHTHHHHHHHHHHHTSCCS-----
T ss_pred             -HhCCCHHHH------HHHHHHHHHHHhccC--------C-H---------HHHHHHHHHHHHHHHHHHHHHHhC-----
Confidence             589876421      334444444433211        1 0         122345667778888888877653     


Q ss_pred             CCCcccHHHHHHHHhhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcccc
Q 009821          283 GKSSKDFLQTLLELQQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEE  362 (524)
Q Consensus       283 ~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~  362 (524)
                        ...|+++.|++...+  ..++++++.+++. .+++|| |||+++++|++++|++||++|+|+++|++           
T Consensus       210 --~~~d~l~~ll~~~~~--~~ls~~el~~~~~-~l~~AG-eTt~~~l~~~l~~L~~~P~~~~~l~~E~~-----------  272 (406)
T 1s1f_A          210 --AGEDVTSLLGAAVGR--DEITLSEAVGLAV-LLQIGG-EAVTNNSGQMFHLLLSRPELAERLRSEPE-----------  272 (406)
T ss_dssp             --CCCSHHHHHHHHHHT--TSSCHHHHHHHHH-HHHHHT-THHHHHHHHHHHHHHHSHHHHHHHHHCGG-----------
T ss_pred             --CCCCHHHHHHHhhcc--cCCCHHHHHHHHH-HHHHhh-HHHHHHHHHHHHHHHHCHHHHHHHHhCHH-----------
Confidence              235899999987643  5689999999999 999999 99999999999999999999999999964           


Q ss_pred             cccCCChhHHHHHHhhhcCCCCCC-CcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCC
Q 009821          363 FHLAKLPYLEAIVKETLRLHPPAP-LLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKI  441 (524)
Q Consensus       363 ~~l~~lpyl~a~i~E~lRl~p~~~-~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~  441 (524)
                             |++|||+|+||++|+++ ..++|.+.+|++++||.||||+.|.++.+++||||++|+||++||||||.     
T Consensus       273 -------~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~i~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~-----  340 (406)
T 1s1f_A          273 -------IRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSP-----  340 (406)
T ss_dssp             -------GHHHHHHHHHHHSCCBSSCCCCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTC-------
T ss_pred             -------HHHHHHHHHHhhCCCccccCcceEeCCCEEECCEEECCCCEEEeCcHHhcCCcccCCCcceeCCCCCC-----
Confidence                   79999999999999999 45899999999999999999999999999999999999999999999995     


Q ss_pred             CcccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhc-eeeCCCC-CCCCcccccccccccCCCceeee
Q 009821          442 GDFRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLF-EWSLPEG-TKFDLSDKLLMALKKSEPLVVIP  512 (524)
Q Consensus       442 ~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~  512 (524)
                             ..++|||+|+|.|+|++||.+|++++++.|+++| +++++++ .++.+..  .........++|++
T Consensus       341 -------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~~--~~~~~~~~~lpv~~  404 (406)
T 1s1f_A          341 -------NPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAPEDVPFKK--GALIRGPEALPVTW  404 (406)
T ss_dssp             -------CCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGGGSCBCS--SCSBCCBSCCEEEC
T ss_pred             -------CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCcEeCCCCccceecc--CcccCCcceeEEee
Confidence                   1489999999999999999999999999999999 7998865 2333322  23344456677665


No 41 
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=100.00  E-value=8.3e-60  Score=458.26  Aligned_cols=380  Identities=19%  Similarity=0.263  Sum_probs=299.5

Q ss_pred             CCChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCcccch------hhhccCCcccccCCchH
Q 009821           71 EPNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAAA------SVLTYGGKSIGASPEWP  144 (524)
Q Consensus        71 ~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~w~  144 (524)
                      ..+++.++.++ ++|||||++++++.++++++||+.++++++++. .+++++.....      ......+....+|+.|+
T Consensus        12 ~~~p~~~~~~~-r~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~h~   89 (404)
T 3ejb_B           12 LKNPYSFYDTL-RAVHPIYKGSFLKYPGWYVTGYEETAAILKDAR-FKVRTPLPESSTKYQDLSHVQNQMMLFQNQPDHR   89 (404)
T ss_dssp             HHCHHHHHHHH-HHHCSEEEEEETTEEEEEECCHHHHHHHHHCTT-EECCCSSCTTCCTTHHHHHHHHTSGGGCCTTHHH
T ss_pred             ccCchHHHHHH-HhhCCEeeccCCCCCEEEEecHHHHHHHHhCcc-cccCcccccccccccchhhhhhcchhhcCCchHH
Confidence            45788999988 589999999999999999999999999999874 56665531110      11122233333999999


Q ss_pred             HHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehh-HHHHHHHHHHHHHHHhccCCCCCCchHHHHHHHH
Q 009821          145 KLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVG-ELMFLTSLDVATRMLWGASLRGEDWDAVAIQFRE  223 (524)
Q Consensus       145 ~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~-~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~  223 (524)
                      ++|+.+. +.|++..++.+.+.+.+.++++++.+.+  ++.+|+. ++...+++++++.+ ||.+...      ...+..
T Consensus        90 ~~Rr~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~--~~~~d~~~~~~~~~~~~vi~~~-~G~~~~~------~~~~~~  159 (404)
T 3ejb_B           90 RLRTLAS-GAFTPRTTESYQPYIIETVHHLLDQVQG--KKKMEVISDFAFPLASFVIANI-IGVPEED------REQLKE  159 (404)
T ss_dssp             HHHHHHH-GGGSHHHHHTTHHHHHHHHHHHHHTTTT--TSEEEHHHHTHHHHHHHHHHHH-HTCCGGG------HHHHHH
T ss_pred             HHHHHHH-hhcCHHHHHHHHHHHHHHHHHHHHHhhh--cCCcchHHHHHHHHHHHHHHHH-cCCCHHH------HHHHHH
Confidence            9999996 8999999999999999999999998875  5678975 45567999999985 8976532      133444


Q ss_pred             HHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcccHHHHHHHHhhcCCCC
Q 009821          224 VLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSSKDFLQTLLELQQQGDYS  303 (524)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~  303 (524)
                      ....+...+..       |..     ....++..+..+.+.+++.+.++++++.       ...|+++.++ ... ++..
T Consensus       160 ~~~~~~~~~~~-------p~~-----~~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~d~l~~ll-~~~-~~~~  218 (404)
T 3ejb_B          160 WAASLIQTIDF-------TRS-----RKALTEGNIMAVQAMAYFKELIQKRKRH-------PQQDMISMLL-KGR-EKDK  218 (404)
T ss_dssp             HHHHHHGGGST-------TCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHH-HC-----C
T ss_pred             HHHHHHHhccC-------CCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CcchHHHHHH-hcc-cCCC
Confidence            43333322211       211     1123556677888888898888887643       2368999999 432 3456


Q ss_pred             CcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcccccccCCChhHHHHHHhhhcCCC
Q 009821          304 LSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLPYLEAIVKETLRLHP  383 (524)
Q Consensus       304 l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p  383 (524)
                      ++++++.+++. .+++||+|||+++++|++++|++||++|+|+++|++                  |+++||+|+||++|
T Consensus       219 ls~~el~~~~~-~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p  279 (404)
T 3ejb_B          219 LTEEEAASTCI-LLAIAGHETTVNLISNSVLCLLQHPEQLLKLRENPD------------------LIGTAVEECLRYES  279 (404)
T ss_dssp             CCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG------------------GHHHHHHHHHHHSC
T ss_pred             CCHHHHHHHHH-HHHHcchHHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------HHHHHHHHHHHhCC
Confidence            89999999999 999999999999999999999999999999999975                  78999999999999


Q ss_pred             CCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCcccCCccceeecCCCCCCCCC
Q 009821          384 PAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGDFRGNNFNYLPFGSGRRICPG  463 (524)
Q Consensus       384 ~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~~~~~~~~~pFg~G~r~C~G  463 (524)
                      +++. ++|.+.+|++++||.||||+.|.++.+++||||++|+||++||||||.            ..++|||+|+|.|+|
T Consensus       280 ~~~~-~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~rdp~~~~dp~~F~p~R~~------------~~~~~Fg~G~r~C~G  346 (404)
T 3ejb_B          280 PTQM-TARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFDITRSP------------NPHLSFGHGHHVCLG  346 (404)
T ss_dssp             SBCE-EEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTCSS------------CCCCTTCCSTTCCTT
T ss_pred             cccc-cceEeCCCeEECCEEECCCCEEEecHHHhCCChhhCCCcceeCCCCCC------------CCCCCCCCcCccCcC
Confidence            9995 799999999999999999999999999999999999999999999982            248999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhhc-eeeCCCCCCCCcccccccccccCCCceeeeecCCCc
Q 009821          464 IPLAEKIVPHVLANLLHLF-EWSLPEGTKFDLSDKLLMALKKSEPLVVIPTPRSLS  518 (524)
Q Consensus       464 ~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~~  518 (524)
                      ++||.+|++++++.|+++| +++++++ ++.+.  .+.+......++|+++||.+.
T Consensus       347 ~~lA~~e~~~~l~~ll~~f~~~~l~~~-~~~~~--~~~~~~~~~~lpv~~~~~~~~  399 (404)
T 3ejb_B          347 SSLARLEAQIAINTLLQRMPSLNLADF-EWRYR--PLFGFRALEELPVTFEASWSH  399 (404)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTCEEC---CCCBC--SCSSBCCBSCCEEECC-----
T ss_pred             HHHHHHHHHHHHHHHHHhCcccccCCC-Cceec--cCcccCCcceeEEEEeccccC
Confidence            9999999999999999999 9999854 33332  234555667799999988653


No 42 
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00  E-value=6.3e-60  Score=458.87  Aligned_cols=377  Identities=20%  Similarity=0.289  Sum_probs=299.4

Q ss_pred             cCCCChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCc--ccch-h------hh---ccCCcc
Q 009821           69 SAEPNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDP--SAAA-S------VL---TYGGKS  136 (524)
Q Consensus        69 ~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~--~~~~-~------~~---~~~~~~  136 (524)
                      .+..+++..+.++ ++||||+++++++.++++|+||+.+++++.++.  +++++.  .... .      ..   ...+..
T Consensus        12 ~~~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   88 (408)
T 1odo_A           12 PTGADHHTEHRTL-REGGPATWVDVLGVQAWSVSDPVLLKQLLTSSD--VSKDARAHWPAFGEVVGTWPLALWVAVENMF   88 (408)
T ss_dssp             TTCTTHHHHHHHH-HTTCSEEEEEETTEEEEEECCHHHHHHHTTCTT--EESCHHHHCTTHHHHTTTCTTTHHHHCCSGG
T ss_pred             cccCChHHHHHHH-HHhCCeEEeccCCCCEEEECCHHHHHHHHcCCC--ccccccccccccccccccccccccccccccc
Confidence            4567899999999 999999999988889999999999999998764  333321  0100 0      00   112222


Q ss_pred             cccCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhcc-CCCceehhHHHH-HHHHHHHHHHHhccCCCCCCc
Q 009821          137 IGASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGR-VGSPIKVGELMF-LTSLDVATRMLWGASLRGEDW  214 (524)
Q Consensus       137 ~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~-~~~~vd~~~~~~-~~~~dvi~~~~fG~~~~~~~~  214 (524)
                      ..+|+.|+++|+.+. +.|+...++.+.+.+.+.++++++.+.+. .++++|+.+.+. .+++|+++. +||.+..    
T Consensus        89 ~~~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~----  162 (408)
T 1odo_A           89 TAYGPNHRKLRRLVA-PAFSARRVDAMRPAVEAMVTGLVDRLAELPAGEPVDLRQELAYPLPIAVIGH-LMGVPQD----  162 (408)
T ss_dssp             GCCHHHHHHHHHTTG-GGGSHHHHHHHHHHHHHHHHHHHHHHHHSCTTSCEEHHHHTTTHHHHHHHHH-HHTCCHH----
T ss_pred             ccCChHHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchHHHHhhhhHHHHHHH-HhCCCHH----
Confidence            338899999999997 89999999999999999999999999753 367899998876 599999996 7898642    


Q ss_pred             hHHHHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcccHHHHHH
Q 009821          215 DAVAIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSSKDFLQTLL  294 (524)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll  294 (524)
                        ....+......++..    .    .          ..++..+..+.+.+++.+.+++++++.       ..|+++.|+
T Consensus       163 --~~~~~~~~~~~~~~~----~----~----------~~~~~~~~~~~~~~~~~~~i~~r~~~~-------~~d~l~~ll  215 (408)
T 1odo_A          163 --RRDGFRALVDGVFDT----T----L----------DQAEAQANTARLYEVLDQLIAAKRATP-------GDDMTSLLI  215 (408)
T ss_dssp             --HHHHHHHHHHHHHCT----T----C----------CHHHHHHHHHHHHHHHHHHHHHHHHSC-------CSSHHHHHH
T ss_pred             --HHHHHHHHHHHHhcc----c----C----------CHHHHHHHHHHHHHHHHHHHHHHhhCC-------CCCHHHHHH
Confidence              123344443333210    0    0          013455677788888888888776531       268999999


Q ss_pred             HHhhcC--CCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcccccccCCChhHH
Q 009821          295 ELQQQG--DYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLPYLE  372 (524)
Q Consensus       295 ~~~~~~--~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~  372 (524)
                      +...++  +..++++++.+++. .+++||+|||+++++|++++|++||++|+|+|+|+                  +|++
T Consensus       216 ~~~~~~~~~~~l~~~ei~~~~~-~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~------------------~~l~  276 (408)
T 1odo_A          216 AARDDEGDGDRLSPEELRDTLL-LMISAGYETTVNVIDQAVHTLLTRPDQLALVRKGE------------------VTWA  276 (408)
T ss_dssp             HHHCC-----CCCHHHHHHHHH-HHHHHHHTTHHHHHHHHHHHHHHCHHHHHHHHHTS------------------SCHH
T ss_pred             HhcccccccCCCCHHHHHHHHH-HHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCH------------------HHHH
Confidence            876432  35689999999999 99999999999999999999999999999999974                  2699


Q ss_pred             HHHHhhhcCCCCCCCcCccccCCCcccc-ceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCcccCCccce
Q 009821          373 AIVKETLRLHPPAPLLTSRRPSATSNLS-GYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGDFRGNNFNY  451 (524)
Q Consensus       373 a~i~E~lRl~p~~~~~~~R~~~~~~~~~-g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~~~~~~~~  451 (524)
                      |||+|+||++|+++..++|.+.+|++++ ||.||||+.|.++.+++||||++|+||++||||||            +..|
T Consensus       277 a~i~E~lRl~p~~~~~~~R~~~~d~~l~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~------------~~~~  344 (408)
T 1odo_A          277 DVVEETLRHEPAVKHLPLRYAVTDIALPDGRTIARGEPILASYAAANRHPDWHEDADTFDATRT------------VKEH  344 (408)
T ss_dssp             HHHHHHHHHSCSBSCEEEEEESSCEECTTSCEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCS------------CCCC
T ss_pred             HHHHHHHhhCCCccCCcceEeCCCeEcCCCcEECCCCEEEeChhhhcCChhhcCCccccCCCCC------------CCCC
Confidence            9999999999999976789999999999 99999999999999999999999999999999994            1359


Q ss_pred             eecCCCCCCCCCHHHHHHHHHHHHHHHhhhc-eeeCCCC-CCCCcccccccccccCCCceeeeec
Q 009821          452 LPFGSGRRICPGIPLAEKIVPHVLANLLHLF-EWSLPEG-TKFDLSDKLLMALKKSEPLVVIPTP  514 (524)
Q Consensus       452 ~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~  514 (524)
                      +|||+|+|.|+|++||++|++++++.|+++| ++++..+ .++.+.  ...+..+..+++|+++|
T Consensus       345 ~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~--~~~~~~~~~~l~v~~~~  407 (408)
T 1odo_A          345 LAFGHGVHFCLGAPLARMEVTLALESLFGRFPDLRLADPAEELPPV--PSLISNGHQRLPVLLHA  407 (408)
T ss_dssp             CTTCSSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESCTTSCCCBC--SCSSBCCBSCCEEECC-
T ss_pred             CCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCcceecCCccccccc--cCccccCcccceEEecC
Confidence            9999999999999999999999999999999 7998643 233332  34555566778888764


No 43 
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=100.00  E-value=4.6e-61  Score=480.88  Aligned_cols=411  Identities=13%  Similarity=0.172  Sum_probs=295.2

Q ss_pred             CCCCCCCCCCCCCCceecccccC-----CCChhHHHHHHHHHhCC-eEEEecCCeeE-------EEeCCHHHHHHHHHhc
Q 009821           48 TRSTPPLPPGPRALPLVGNILSA-----EPNLHRYFTKLSQIYGP-IFKFYLGRKLC-------IVIGSPSLAKQVLKEH  114 (524)
Q Consensus        48 ~~~~~~~ppgp~~~p~iG~~~~~-----~~~~~~~~~~~~~kyG~-i~~~~~g~~~~-------vvv~dp~~i~~il~~~  114 (524)
                      ...+.+.||||.++|++|+++++     +.+++.++.++++|||+ ||++++++.++       +++.|++..+.++.+.
T Consensus        23 ~~~p~~~pPGp~g~P~iG~~~~~~~~~~~~~~~~f~~~~~~kyG~~Vf~~~l~~~~~vv~~p~~v~~~~~~~~~~l~~~~  102 (495)
T 3dsk_A           23 KDLPIRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENPQVVALLDGKSFPVLFDVD  102 (495)
T ss_dssp             -CCCBCCCCCCCCSTTHHHHHHHHHHHTTSCHHHHHHHHHHHHTCSEEEEECSCCTTTCSCCEEEEECSTTTGGGGGCTT
T ss_pred             CCCCCCCCCCCCCCCccchHHHHHHHHHhcCcHHHHHHHHHHhCCceEeecCCCCCCccCCCCEEEEeCCcceeeecccc
Confidence            34566789999999999998765     57899999999999999 99999988777       6667777666555432


Q ss_pred             c----ccccCCCcccchhhhccCC-cccc--cCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhcc--CCCc
Q 009821          115 D----VVFANRDPSAAASVLTYGG-KSIG--ASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGR--VGSP  185 (524)
Q Consensus       115 ~----~~~~~~~~~~~~~~~~~~~-~~~~--~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~--~~~~  185 (524)
                      .    ..+........ ..++..+ ..+.  +|+.|+++|+.+. +.|+... +.+.+.+++.+.++++.+...  .+++
T Consensus       103 ~v~k~~~~~~~~~~~~-~l~g~~~~~~~~~~~g~~h~~~R~~~~-~~f~~~~-~~~~~~i~~~~~~ll~~~~~~~~~~~~  179 (495)
T 3dsk_A          103 KVEKKDLLTGTYMPST-ELTGGYRILSYLDPSEPKHEKLKNLLF-FLLKSSR-NRIFPEFQATYSELFDSLEKELSLKGK  179 (495)
T ss_dssp             TEECSSCTTSSSCCCG-GGGTTCCCGGGCCTTSHHHHHHHHHHH-HHHHHTT-TTHHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred             cccccccccccCCCCc-cccCCCcceeeeCCCchHHHHHHHHHH-HHHHHHH-HHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence            1    11212211111 2232111 2222  8899999999997 7777644 889999999999999988653  3578


Q ss_pred             eehhHHHHHHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHH
Q 009821          186 IKVGELMFLTSLDVATRMLWGASLRGEDWDAVAIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDK  265 (524)
Q Consensus       186 vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~  265 (524)
                      +|+.+++..++++++++++||.++...+..   ..+...+........       .|.+... .+              +
T Consensus       180 vdl~~~~~~~~~~~i~~~~~G~~~~~~~~~---~~~~~~~~~~~~~~~-------~p~~~~~-~p--------------~  234 (495)
T 3dsk_A          180 ADFGGSSDGTAFNFLARAFYGTNPADTKLK---ADAPGLITKWVLFNL-------HPLLSIG-LP--------------R  234 (495)
T ss_dssp             EESHHHHHHHHHHHHHHHHHSCCGGGSTTT---TCHHHHHHHHHHHHH-------GGGCCCS-SC--------------H
T ss_pred             ccHHHHHHHHHHHHHHHHHcCCCcchhhhh---hhHHHHHHHHHHHhh-------hhHhHhc-cH--------------H
Confidence            999999999999999999999987654321   222222332222111       1111100 00              1


Q ss_pred             HHHHhhccccCCCCC---CCCC----CcccHHHHHHHHhhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhh
Q 009821          266 IFESLLRPGQSGQDM---NEGK----SSKDFLQTLLELQQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQ  338 (524)
Q Consensus       266 ~~~~~i~~~~~~~~~---~~~~----~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~  338 (524)
                      ++.+.+.++++....   ....    ...+.++.+++...+  ..++++|+.+++++.+++||+|||+.+++|++++|+.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~--~~l~~~ei~~~~~~~l~~ag~~tt~~~l~~~l~~L~~  312 (495)
T 3dsk_A          235 VIEEPLIHTFSLPPALVKSDYQRLYEFFLESAGEILVEADK--LGISREEATHNLLFATCFNTWGGMKILFPNMVKRIGR  312 (495)
T ss_dssp             HHHHHHHSSSCCCGGGGHHHHHHHHHHHHHHCHHHHHHHHH--TTCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhcccchhhhhhHHHHHHHHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHh
Confidence            112222222111000   0000    001223445554433  4689999998777455699999999999999999995


Q ss_pred             -CcHHHHHHHHHHHHhhcCC-CcccccccCCChhHHHHHHhhhcCCCCCCCcCccccCCCccc----cceeeCCCCEEEe
Q 009821          339 -KPEVMRKARNELEQVVARD-SVVEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNL----SGYTIPKGSTIFI  412 (524)
Q Consensus       339 -~pe~~~klr~Ei~~~~~~~-~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~----~g~~ip~G~~v~~  412 (524)
                       ||++|+|||+|++++++.+ +.++.+++.+||||+|||+|+||++|+++.. .|.+.+|+++    +||.||||+.|.+
T Consensus       313 ~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~-~r~a~~d~~l~~~~~g~~IpkG~~v~~  391 (495)
T 3dsk_A          313 AGHQVHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQ-YGRAKKDLVIESHDAAFKVKAGEMLYG  391 (495)
T ss_dssp             HCHHHHHHHHHHHHHHHHHTTTCCCHHHHHTCHHHHHHHHHHHHHSCSSCEE-EEEESSCEEEECSSCEEEECTTCEEEE
T ss_pred             cCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhcCCCcccc-ceeecCCeEeccCCCceEECCCCEEEe
Confidence             9999999999999998754 6789999999999999999999999999985 5779999999    4999999999999


Q ss_pred             ehhhhccCCCCCCCCCCCCCCccccccCCCccc----CCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhceeeCCC
Q 009821          413 NAWAIQRNPEVWENPQDFQPDRFLEDVKIGDFR----GNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLFEWSLPE  488 (524)
Q Consensus       413 ~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~~----~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~  488 (524)
                      +.+++||||++|+||++||||||++.++.....    +....++|||+|+|.|||++||.+|++++++.|+++|++...+
T Consensus       392 ~~~~~~~dp~~~~dp~~F~P~Rfl~~~~~~~~~~~~fg~G~~~~~fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~  471 (495)
T 3dsk_A          392 YQPLATRDPKIFDRADEFVPERFVGEEGEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRYDSFDIE  471 (495)
T ss_dssp             EHHHHHTCTTTSTTTTSCCTTTTCHHHHHHGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHEEEEEEE
T ss_pred             ccHHhhCCcccCCCccccCCcccCCCCccchhhcccccCCcCcCCCCCCCCcCchHHHHHHHHHHHHHHHHHHCceEeCC
Confidence            999999999999999999999999753210000    0111344555555999999999999999999999999987654


Q ss_pred             C
Q 009821          489 G  489 (524)
Q Consensus       489 ~  489 (524)
                      +
T Consensus       472 ~  472 (495)
T 3dsk_A          472 V  472 (495)
T ss_dssp             E
T ss_pred             C
Confidence            4


No 44 
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=100.00  E-value=7.6e-60  Score=459.64  Aligned_cols=382  Identities=19%  Similarity=0.252  Sum_probs=304.7

Q ss_pred             CCCChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCc-----cc-c--hhhhc---cCCcccc
Q 009821           70 AEPNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDP-----SA-A--ASVLT---YGGKSIG  138 (524)
Q Consensus        70 ~~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~-----~~-~--~~~~~---~~~~~~~  138 (524)
                      +..+++.++.++ ++||||++ + ++.+.++|+||+.+++++.++.  |++++.     .. .  ...+.   ..+....
T Consensus        24 ~~~~p~~~~~~l-~~~Gpv~~-~-~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   98 (419)
T 1q5d_A           24 YAEDPFPAIERL-REATPIFY-W-DEGRSWVLTRYHDVSAVFRDER--FAVSREEWESSAEYSSAIPELSDMKKYGLFGL   98 (419)
T ss_dssp             TTTCCHHHHHHH-HHHCSEEE-E-TTTTEEEECSHHHHHHHHTCTT--EECCGGGSTTHHHHHHSSGGGHHHHHHSTTTS
T ss_pred             hhhChHHHHHHH-HhhCCccc-c-CCCCEEEEecHHHHHHHHcCCC--ccccccccccccccccccchhhhhcccccccC
Confidence            356889999999 78999999 6 6678999999999999998775  777651     11 1  01111   1122223


Q ss_pred             cCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehhH-HHHHHHHHHHHHHHhccCCCCCCchHH
Q 009821          139 ASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVGE-LMFLTSLDVATRMLWGASLRGEDWDAV  217 (524)
Q Consensus       139 ~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~-~~~~~~~dvi~~~~fG~~~~~~~~~~~  217 (524)
                      +|+.|+++|+.+. +.|+...++.+.+.+.+.++++++.+..  ++++|+.. +...+++|+|+.+ ||.++++.     
T Consensus        99 ~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~--~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~~-----  169 (419)
T 1q5d_A           99 PPEDHARVRKLVN-PSFTSRAIDLLRAEIQRTVDQLLDARSG--QEEFDVVRDYAEGIPMRAISAL-LKVPAECD-----  169 (419)
T ss_dssp             CHHHHHHHHHHHG-GGGSHHHHGGGHHHHHHHHHHHHHHHTT--SSCEETTTTTGGGSHHHHHHHH-TTCCGGGH-----
T ss_pred             CchHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHH-hCCCHHHH-----
Confidence            8899999999996 8999999999999999999999999976  34799875 5589999999998 99876421     


Q ss_pred             HHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcc-cHHHHHHHH
Q 009821          218 AIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSSK-DFLQTLLEL  296 (524)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~-d~l~~ll~~  296 (524)
                       ..+......+......    ..+|+..     ...++..+..+.+.+++.+.+++++++.       .. |+++.|++.
T Consensus       170 -~~~~~~~~~~~~~~~~----~~~P~~~-----~~~~~~~~~~~~~~~~~~~~i~~r~~~~-------~~~dll~~ll~~  232 (419)
T 1q5d_A          170 -EKFRRFGSATARALGV----GLVPRVD-----EETKTLVASVTEGLALLHGVLDERRRNP-------LENDVLTMLLQA  232 (419)
T ss_dssp             -HHHHHHHHHHHHHTTT----TTSSCCC-----SCHHHHHHHHHHHHHHHHHHHHHHHHSC-------CSSCHHHHHHHH
T ss_pred             -HHHHHHHHHHHHhccc----ccccCCh-----HHHHHHHHHHHHHHHHHHHHHHHHHhCC-------CCCCHHHHHHhh
Confidence             3344444444433221    1233321     1234566777888888998888876531       24 899999987


Q ss_pred             hhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcccccccCCChhHHHHHH
Q 009821          297 QQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLPYLEAIVK  376 (524)
Q Consensus       297 ~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~  376 (524)
                      ..+ +..++++++.+++. .+++||+|||+++++|++++|++||++|+|+++|+                  .|++|||+
T Consensus       233 ~~~-~~~l~~~ei~~~~~-~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~  292 (419)
T 1q5d_A          233 EAD-GSRLSTKELVALVG-AIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAEP------------------GLMRNALD  292 (419)
T ss_dssp             HHS-STTCCHHHHHHHHH-HHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCG------------------GGHHHHHH
T ss_pred             hcc-CCCCCHHHHHHHHH-HHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCH------------------HHHHHHHH
Confidence            543 44689999999999 99999999999999999999999999999999994                  28999999


Q ss_pred             hhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCcccCCccceeecCC
Q 009821          377 ETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGDFRGNNFNYLPFGS  456 (524)
Q Consensus       377 E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~~~~~~~~~pFg~  456 (524)
                      |+||++|+++..++|.+.+|++++||.||+|+.|.++.+++||||++|+||++||||||-            ..++|||+
T Consensus       293 E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~------------~~~l~FG~  360 (419)
T 1q5d_A          293 EVLRFDNILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRRDT------------SASLAYGR  360 (419)
T ss_dssp             HHHHHSCSBSSEEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCC------------TTCCTTCC
T ss_pred             HHHHhCCccccccceeeCCCeEECCEEECCCCEEEecHHHhcCChhhCCChhhcCCCCCC------------CCCCCCCC
Confidence            999999999955899999999999999999999999999999999999999999999941            25899999


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHhhhc-eeeCCCCCCCCcccccccccccCCCceeeeecCCCc
Q 009821          457 GRRICPGIPLAEKIVPHVLANLLHLF-EWSLPEGTKFDLSDKLLMALKKSEPLVVIPTPRSLS  518 (524)
Q Consensus       457 G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~~  518 (524)
                      |+|.|+|++||.+|++++++.|+++| ++++.++.  ++.  ...+.....+++|++++|+++
T Consensus       361 G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~--~~~~~~~~~~l~v~~~~r~~~  419 (419)
T 1q5d_A          361 GPHVCPGVSLARLEAEIAVGTIFRRFPEMKLKETP--VFG--YHPAFRNIESLNVILKPSKAG  419 (419)
T ss_dssp             GGGCCTTHHHHHHHHHHHHHHHHHHCTTCEECSCC--EEC--CCSSBCCEEECEEESSCC---
T ss_pred             CCCcCccHHHHHHHHHHHHHHHHHhCCCeEECCCc--ccc--cccccCCCceeEEEEecCCCC
Confidence            99999999999999999999999999 79987652  222  234555667899999999764


No 45 
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=100.00  E-value=1.2e-59  Score=456.03  Aligned_cols=373  Identities=15%  Similarity=0.206  Sum_probs=299.9

Q ss_pred             CCChhHHHHHHHHHhCCeEEEecCC--eeEEEeCCHHHHHHHHHhccccccCCCcccc----hhh-hc--cCCcccccCC
Q 009821           71 EPNLHRYFTKLSQIYGPIFKFYLGR--KLCIVIGSPSLAKQVLKEHDVVFANRDPSAA----ASV-LT--YGGKSIGASP  141 (524)
Q Consensus        71 ~~~~~~~~~~~~~kyG~i~~~~~g~--~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~----~~~-~~--~~~~~~~~~~  141 (524)
                      |.+++.++.+++ +||||+++.+++  .+.+++++|+.+++|+.++  .|.++.....    ... ..  ..+....+|+
T Consensus        26 g~~p~~~~~~l~-~~Gpv~~~~~~~g~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~  102 (411)
T 2dkk_A           26 GPEFDPVLAELM-REGPLTRVRLPHGEGWAWLATRYDDVKAITNDP--RFGRAEVTQRQITRLAPHFKPRPGSLAFADQP  102 (411)
T ss_dssp             SSCCCHHHHHHH-TTCSEEEEECSBSBSCEEEECSHHHHHHHTTCT--TEESGGGGGSCBCBSSSCCCCCTTCSTTCCTT
T ss_pred             cccccHHHHHHH-hcCCeEeeecCCCceeEEEEcCHHHHHHHHcCC--CcccCCCCCCCccccccchhccccccccCCch
Confidence            667889999997 899999999764  6799999999999999874  3655433211    111 11  1122223899


Q ss_pred             chHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehhHHHH-HHHHHHHHHHHhccCCCCCCchHHHHH
Q 009821          142 EWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVGELMF-LTSLDVATRMLWGASLRGEDWDAVAIQ  220 (524)
Q Consensus       142 ~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~~-~~~~dvi~~~~fG~~~~~~~~~~~~~~  220 (524)
                      .|+++|+.+. +.|+...++.+.+.+.+.++++++.+.. .++++|+...+. .+++|+|+. +||.++++      ...
T Consensus       103 ~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~-~g~~~dl~~~~~~~~~~~vi~~-l~G~~~~~------~~~  173 (411)
T 2dkk_A          103 DHNRLRRAVA-GAFTVGATKRLRPRAQEILDGLVDGILA-EGPPADLVERVLEPFPIAVVSE-VMGVPAAD------RER  173 (411)
T ss_dssp             HHHHHHHHHG-GGSSHHHHHHHHHHHHHHHHHHHHHHHH-HCSCEEHHHHTTTHHHHHHHHH-HHTCCSSH------HHH
T ss_pred             HHHHHHHHhh-HhhCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCeehHHHHHHHHHHHHHHH-HhCCCHHH------HHH
Confidence            9999999997 8899999999999999999999999976 455899987665 799999998 59987642      122


Q ss_pred             HHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcccHHHHHHHHhhcC
Q 009821          221 FREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSSKDFLQTLLELQQQG  300 (524)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~  300 (524)
                      +......    +..     ..+         ..++..+..+.+.+++.+.+++++++.       ..|+++.|++. . +
T Consensus       174 ~~~~~~~----~~~-----~~~---------~~~~~~~~~~~l~~~~~~~i~~r~~~~-------~~dll~~ll~~-~-~  226 (411)
T 2dkk_A          174 VHSWTRQ----IIS-----TSG---------GAEAAERAKRGLYGWITETVRARAGSE-------GGDVYSMLGAA-V-G  226 (411)
T ss_dssp             HHHHHGG----GCS-----SCS---------CSHHHHHHHHHHHHHHHHHHHTTTTCC-------SSCHHHHHHHH-H-H
T ss_pred             HHHHHHH----HHh-----ccc---------hHHHHHHHHHHHHHHHHHHHHHHHhCC-------CCCHHHHHHHh-c-C
Confidence            3222211    111     111         124456677888889999998876532       35899999987 3 3


Q ss_pred             CCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcccccccCCChhHHHHHHhhhc
Q 009821          301 DYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLPYLEAIVKETLR  380 (524)
Q Consensus       301 ~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lR  380 (524)
                      +..++++++.+++. .+++|| |||+++++|++++|++||++|+|+|+|++                  |+++||+|+||
T Consensus       227 ~~~ls~~el~~~~~-~l~~AG-eTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lR  286 (411)
T 2dkk_A          227 RGEVGETEAVGLAG-PLQIGG-EAVTHNVGQMLYLLLTRRELMARMRERPG------------------ARGTALDELLR  286 (411)
T ss_dssp             TTSSCTTSHHHHHH-HHHHTH-HHHHHHHHHHHHHHHHSHHHHHHHHHCTT------------------CCHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHH-HHHHhh-HHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------HHHHHHHHHHh
Confidence            35689999999998 999999 99999999999999999999999999974                  78999999999


Q ss_pred             CCCCCCCc-CccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCcccCCccceeecCCCCC
Q 009821          381 LHPPAPLL-TSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGDFRGNNFNYLPFGSGRR  459 (524)
Q Consensus       381 l~p~~~~~-~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~~~~~~~~~pFg~G~r  459 (524)
                      ++|+++.. ++|.+.+|++++|+.||+|+.|.++.+++||||++|+||++||||||.            ..++|||+|+|
T Consensus       287 l~p~~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dp~~F~PeR~~------------~~~l~FG~G~r  354 (411)
T 2dkk_A          287 WISHRTSVGLARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDRDP------------NPHLAYGNGHH  354 (411)
T ss_dssp             HSCCBSSCCCCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCCSCSS------------CCCCTTCCSTT
T ss_pred             hCCccccCccceEECCCEEECCEEECCCCEEEeChhhhcCChhhCCCCCCCCCCCCC------------CCCCCCCCCCC
Confidence            99999966 789999999999999999999999999999999999999999999995            25899999999


Q ss_pred             CCCCHHHHHHHHHHHHHHHhhhc-eeeCCCC-CCCCcccccccccccCCCceeeeecCC
Q 009821          460 ICPGIPLAEKIVPHVLANLLHLF-EWSLPEG-TKFDLSDKLLMALKKSEPLVVIPTPRS  516 (524)
Q Consensus       460 ~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~r~  516 (524)
                      .|+|++||.+|++++++.|+++| ++++.++ .++.+..  ..+......++|++++|.
T Consensus       355 ~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~~--~~~~~~~~~lpv~~~~R~  411 (411)
T 2dkk_A          355 FCTGAVLARMQTELLVDTLLERLPGLRLAVPAEQVAWRR--KTMIRGPRTLPCTWHHHH  411 (411)
T ss_dssp             SCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGGGCCBCC--SSSBCCBSCCEEECCCCC
T ss_pred             CCcCHHHHHHHHHHHHHHHHHHCCCcEECCCcccccccc--CcccCCcceeEEEeccCC
Confidence            99999999999999999999999 8998765 2333322  344556678999998874


No 46 
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=100.00  E-value=3.8e-59  Score=454.89  Aligned_cols=379  Identities=15%  Similarity=0.148  Sum_probs=295.8

Q ss_pred             CCChhHHHHHHHHHhCCeEEEecC--CeeEEEeCCHHHHHHHHHhccccccCCCcc--------c-c-------hhhhcc
Q 009821           71 EPNLHRYFTKLSQIYGPIFKFYLG--RKLCIVIGSPSLAKQVLKEHDVVFANRDPS--------A-A-------ASVLTY  132 (524)
Q Consensus        71 ~~~~~~~~~~~~~kyG~i~~~~~g--~~~~vvv~dp~~i~~il~~~~~~~~~~~~~--------~-~-------~~~~~~  132 (524)
                      ..+++.++.+++ +||||+++++|  +.++++|+||+.+++++.++  .|++++..        . .       ......
T Consensus        19 ~~~p~~~~~~l~-~~Gpv~~~~~g~~~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (425)
T 2z3t_A           19 IADPYPVYRRYR-EAAPVHRTASGPGKPDTYYVFTYDDVVRVLSNR--RLGRNARVASGDTDTAPVPIPTEHRALRTVVE   95 (425)
T ss_dssp             HHCCHHHHHHHH-HHCSEEEECCCSSCCCEEEECSHHHHHHHHHCT--TEESSCCCC---------------CHHHHHHT
T ss_pred             hcChHHHHHHHH-hcCCeEeccccCCCCCeEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccccccccc
Confidence            356788999985 59999999987  67899999999999999875  47666431        0 0       001111


Q ss_pred             CCcccccCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehhHH-HHHHHHHHHHHHHhccCCCC
Q 009821          133 GGKSIGASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVGEL-MFLTSLDVATRMLWGASLRG  211 (524)
Q Consensus       133 ~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~-~~~~~~dvi~~~~fG~~~~~  211 (524)
                      .+....+|+.|+++|+.+. +.|+...++.+.+.+.+.++++++.+.. . +++|+... ...+++++++.+ ||.++++
T Consensus        96 ~~l~~~dg~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~-~-g~~dl~~~~~~~~~~~vi~~~-~G~~~~~  171 (425)
T 2z3t_A           96 NWLVFLDPPHHTELRSLLT-TEFSPSIVTGLRPRIAELASALLDRLRA-Q-RRPDLVEGFAAPLPILVISAL-LGIPEED  171 (425)
T ss_dssp             TCGGGCCHHHHHHHHHHHH-GGGSHHHHHHHHHHHHHHHHHHHHHHTT-S-SSCBHHHHTTTHHHHHHHHHH-HTCCGGG
T ss_pred             cccccCCchHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHHh-c-CCccHHHHHHHHHHHHHHHHH-hCCCHHH
Confidence            2223338899999999996 8999999999999999999999999976 2 37998874 578999999998 9987642


Q ss_pred             CCchHHHHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcccHHH
Q 009821          212 EDWDAVAIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSSKDFLQ  291 (524)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~  291 (524)
                            ...+......+....      ..+| +.    ....++..+..+.+.+++.+.+++++++       ...|+++
T Consensus       172 ------~~~~~~~~~~~~~~~------~~~~-~~----~~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~dll~  227 (425)
T 2z3t_A          172 ------HTWLRANAVALQEAS------TTRA-RD----GRGYARAEAASQEFTRYFRREVDRRGGD-------DRDDLLT  227 (425)
T ss_dssp             ------HHHHHHHHHHHHTTC------TTCC-C-------HHHHHHHHHHHHHHHHHHHHCC--------------CHHH
T ss_pred             ------HHHHHHHHHHHHhhc------cccC-CC----HHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHH
Confidence                  123444333332211      1112 10    1123456677888899999999887653       2468999


Q ss_pred             HHHHHhhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcccccccCCChhH
Q 009821          292 TLLELQQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLPYL  371 (524)
Q Consensus       292 ~ll~~~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl  371 (524)
                      .|++...+ +..++++++.+++. .+++||+|||+++++|++++|++||++|+|+|+|++                  |+
T Consensus       228 ~ll~~~~~-~~~ls~~el~~~~~-~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l  287 (425)
T 2z3t_A          228 LLVRARDT-GSPLSVDGIVGTCV-HLLTAGHETTTNFLAKAVLTLRAHRDVLDELRTTPE------------------ST  287 (425)
T ss_dssp             HHHHHHHT-TCCCCHHHHHHHHH-HHHHHTTTTHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GH
T ss_pred             HHHHhhcc-CCCCCHHHHHHHHH-HHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhChH------------------hH
Confidence            99987653 45689999999999 999999999999999999999999999999999963                  89


Q ss_pred             HHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCcccCCccce
Q 009821          372 EAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGDFRGNNFNY  451 (524)
Q Consensus       372 ~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~~~~~~~~  451 (524)
                      +|||+|+||++|+++ .++|.+.+|++++||.||||+.|.++.+++||||++|+||++||||||.            ..+
T Consensus       288 ~a~i~E~lRl~p~~~-~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~------------~~~  354 (425)
T 2z3t_A          288 PAAVEELMRYDPPVQ-AVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDVLDVHRAA------------ERQ  354 (425)
T ss_dssp             HHHHHHHHHHSCSBC-EEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCS------------SCC
T ss_pred             HHHHHHHHHhCCccc-CcceEeCCCeeECCEEECCCCEEEeChhhhCCCccccCCcccCCCCCCC------------CCC
Confidence            999999999999999 4899999999999999999999999999999999999999999999995            148


Q ss_pred             eecCCCCCCCCCHHHHHHHHHHHHHHHhhhc-eeeCCCCCCCCcccccccccccCCCceeeeecCC
Q 009821          452 LPFGSGRRICPGIPLAEKIVPHVLANLLHLF-EWSLPEGTKFDLSDKLLMALKKSEPLVVIPTPRS  516 (524)
Q Consensus       452 ~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  516 (524)
                      +|||+|+|.|+|++||++|++++++.|+++| +++ +++.+..+.  ...+.....+++|++++..
T Consensus       355 l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~-~~~~~~~~~--~~~~~~~~~~lpv~~~~~~  417 (425)
T 2z3t_A          355 VGFGLGIHYCLGATLARAEAEIGLRALLDGIPALG-RGAHEVEYA--DDMVFHGPTRLLLDLPDAA  417 (425)
T ss_dssp             CTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCGGGG-SSCEEEEEC--SCSSBCCEEEEEECCC---
T ss_pred             CCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCcCc-cCCCccccc--cccccCCcceeeEEecchh
Confidence            9999999999999999999999999999999 899 765211222  2344455566778776654


No 47 
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=100.00  E-value=4.4e-60  Score=459.94  Aligned_cols=375  Identities=15%  Similarity=0.169  Sum_probs=296.0

Q ss_pred             cCCCChhHHHHHHHHHhCCeEEEec-CCeeEEEeCCHHHHHHHHHhccccccCCCc---ccc---hhh---hccCCcccc
Q 009821           69 SAEPNLHRYFTKLSQIYGPIFKFYL-GRKLCIVIGSPSLAKQVLKEHDVVFANRDP---SAA---ASV---LTYGGKSIG  138 (524)
Q Consensus        69 ~~~~~~~~~~~~~~~kyG~i~~~~~-g~~~~vvv~dp~~i~~il~~~~~~~~~~~~---~~~---~~~---~~~~~~~~~  138 (524)
                      .+..+++..+.++ ++||||+++++ |+.++++++||+.+++++.++.  +.+++.   ...   ...   ...++....
T Consensus        21 ~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   97 (408)
T 3abb_A           21 TCPYQPPKAYEER-RGESPLTQVTLFDGRPAWLITGHAEGRALLVDPR--LSSDWGHPDFPVVVRRTEDRGGLAFPLIGV   97 (408)
T ss_dssp             SSTTSCCHHHHHH-CCSSSEEEEECTTSCEEEEECCHHHHHHHHTCTT--EECCTTSTTCCCCC---------CCTTTTC
T ss_pred             ccccCchHHHHHH-HhcCCeeeeecCCCCcEEEEeCHHHHHHHHcCCC--cccccccccccccccCCccccccccccccC
Confidence            3567889999999 89999999997 8889999999999999998754  333322   110   000   011222223


Q ss_pred             cCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehhHHHH-HHHHHHHHHHHhccCCCCCCchHH
Q 009821          139 ASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVGELMF-LTSLDVATRMLWGASLRGEDWDAV  217 (524)
Q Consensus       139 ~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~~-~~~~dvi~~~~fG~~~~~~~~~~~  217 (524)
                      +|+.|+++|+.+. +.|+...++.+.+.+.+.++++++.+.. .++++|+.+.+. .+++++++. +||.+..+      
T Consensus        98 ~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~-~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~------  168 (408)
T 3abb_A           98 DDPVHARQRRMLI-PSFGVKRMNAIRPRLQSLVDRLLDDMLA-KGPGADLVSAFALPVPSVAICE-LLGVPYGD------  168 (408)
T ss_dssp             CTTHHHHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHHHHH-TCSCEEHHHHTTTHHHHHHHHH-HHTCCGGG------
T ss_pred             CchHHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCeehHHHHHHHHHHHHHHH-HhCCCHHH------
Confidence            8999999999997 8899999999999999999999999975 456899998775 589999997 79987532      


Q ss_pred             HHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcccHHHHHHHHh
Q 009821          218 AIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSSKDFLQTLLELQ  297 (524)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~  297 (524)
                      ...+......++...        .+           ++..+..+.+.+++.+.+++++++.       ..|+++.|++..
T Consensus       169 ~~~~~~~~~~~~~~~--------~~-----------~~~~~~~~~~~~~~~~~i~~r~~~~-------~~d~l~~ll~~~  222 (408)
T 3abb_A          169 HDFFEECSRNFVGAA--------TS-----------AEADAAFGELYTYLHGLVGRKQAEP-------EDGLLDELIARQ  222 (408)
T ss_dssp             HHHHHHHHHHHC-------------------------CCSSHHHHHHHHHHHHHHHHHHSC-------CSSHHHHHHHHH
T ss_pred             HHHHHHHHHHHhccc--------ch-----------HHHHHHHHHHHHHHHHHHHHHHhCC-------CCCHHHHHHhcc
Confidence            133444333322100        01           1122344556667777777665431       268999999876


Q ss_pred             hcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcccccccCCChhHHHHHHh
Q 009821          298 QQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLPYLEAIVKE  377 (524)
Q Consensus       298 ~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E  377 (524)
                      .+ +..++++++.+++. .+++||+|||+++++|++++|++||++|+|+++|++                  |++|||+|
T Consensus       223 ~~-~~~ls~~ei~~~~~-~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~------------------~l~a~i~E  282 (408)
T 3abb_A          223 LE-EGDLDHDEVVMIAL-VLLVAGHETTVNAIALGALTLIQHPEQIDVLLRDPG------------------AVSGVVEE  282 (408)
T ss_dssp             HT-SSSCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTCGGGGGGGGSCHH------------------HHHHHHHH
T ss_pred             cC-CCCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------hHHHHHHH
Confidence            53 45689999999998 999999999999999999999999999999998763                  79999999


Q ss_pred             hhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCcccCCccceeecCCC
Q 009821          378 TLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGDFRGNNFNYLPFGSG  457 (524)
Q Consensus       378 ~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~~~~~~~~~pFg~G  457 (524)
                      +||++|+++ .++|.+.+|++++||.||||+.|.++.+++||||++|+||++||||||.            ..++|||+|
T Consensus       283 ~lRl~p~~~-~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~------------~~~~~FG~G  349 (408)
T 3abb_A          283 LLRFTSVSD-HIVRMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIFDARRNA------------RHHVGFGHG  349 (408)
T ss_dssp             HHHHHCSSC-EEEEEESSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTSCC------------TTCCTTCCG
T ss_pred             HHHhcCccc-ccceEeCCCeEECCEEECCCCEEEeChHHhcCCcccCCCcccCCCCCCC------------CCCCCCCCC
Confidence            999999999 5899999999999999999999999999999999999999999999962            258999999


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHhhhc-eeeCCCC-CCCCcccccccccccCCCceeeeecCC
Q 009821          458 RRICPGIPLAEKIVPHVLANLLHLF-EWSLPEG-TKFDLSDKLLMALKKSEPLVVIPTPRS  516 (524)
Q Consensus       458 ~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~r~  516 (524)
                      +|.|+|++||++|++++++.|+++| ++++..+ .++++..  ..+......++|++++|.
T Consensus       350 ~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~--~~~~~~~~~lpv~~~~~~  408 (408)
T 3abb_A          350 IHQCLGQNLARAELEIALGGLFARIPGLRLAVPLDEVPIKA--GHDAQGPIELPVVWHHHH  408 (408)
T ss_dssp             GGCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGSCBCC--TTSCCSBSCCEEECSCCC
T ss_pred             CcCCcCHHHHHHHHHHHHHHHHHhCccceecCCcccccccc--CcccCCcceeEEEeCCCC
Confidence            9999999999999999999999999 7998643 2333322  344555677889888774


No 48 
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=100.00  E-value=4.1e-59  Score=451.92  Aligned_cols=376  Identities=14%  Similarity=0.157  Sum_probs=299.8

Q ss_pred             CCChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCcccchhhhccCCcccccCCchHHHHHHH
Q 009821           71 EPNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAAASVLTYGGKSIGASPEWPKLRQVL  150 (524)
Q Consensus        71 ~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~  150 (524)
                      ..+++.++.++++ |||||++.  . ++++|+||+.+++++.+++ .|++++... .......+....+|+.|+++|+.+
T Consensus        17 ~~~p~~~~~~l~~-~Gpv~~~~--~-~~vvv~~~~~v~~vl~~~~-~f~~~~~~~-~~~~~~~~l~~~~g~~h~~~R~~~   90 (398)
T 2xkr_A           17 SREARAAYRWMRA-NQPVFRDR--N-GLAAASTYQAVIDAERQPE-LFSNAGGIR-PDQPALPMMIDMDDPAHLLRRKLV   90 (398)
T ss_dssp             CTTHHHHHHHHHH-HCSEEECT--T-CCEEECSHHHHHHHHTCTT-TEESTTCSS-TTSCCCSSGGGCCTTHHHHHHHHH
T ss_pred             ccChhHHHHHHHh-cCCeeecC--C-CeEEEecHHHHHHHHhCcc-cccCccccC-CcccccccccccCchHHHHHHHHh
Confidence            4678999999987 99999664  3 7899999999999998765 576665322 111112222233899999999999


Q ss_pred             HHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehh-HHHHHHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHH
Q 009821          151 VRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVG-ELMFLTSLDVATRMLWGASLRGEDWDAVAIQFREVLEEMF  229 (524)
Q Consensus       151 ~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~-~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~  229 (524)
                      . +.|+...++.+.+.+.+.++++++.+..  ++++|+. +++..+++|+|+++ ||.++++.      ..+......+.
T Consensus        91 ~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~--~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~~------~~~~~~~~~~~  160 (398)
T 2xkr_A           91 N-AGFTRKRVKDKEASIAALCDTLIDAVCE--RGECDFVRDLAAPLPMAVIGDM-LGVRPEQR------DMFLRWSDDLV  160 (398)
T ss_dssp             G-GGSCHHHHHTTHHHHHHHHHHHHHTTTT--TSEEEHHHHTTTHHHHHHHHHH-HTCCGGGH------HHHHHHHHHHH
T ss_pred             h-hhhCHHHHHHHHHHHHHHHHHHHHhhhh--cCCccHHHHHHHHHHHHHHHHH-hCCCHHHH------HHHHHHHHHHH
Confidence            6 8999999999999999999999999875  3479998 55678999999998 99876421      33444444444


Q ss_pred             HHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcccHHHHHHHHhhcCCCCCcHHHH
Q 009821          230 QVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSSKDFLQTLLELQQQGDYSLSMDQI  309 (524)
Q Consensus       230 ~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~l~~~~i  309 (524)
                      .....    .++|        ...++..+..+.+.+++.+.+++++++       ...|+++.+++... ++..++++++
T Consensus       161 ~~~~~----~~~p--------~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~dll~~ll~~~~-~~~~ls~~ei  220 (398)
T 2xkr_A          161 TFLSS----HVSQ--------EDFQITMDAFAAYNDFTRATIAARRAD-------PTDDLVSVLVSSEV-DGERLSDDEL  220 (398)
T ss_dssp             HHHTS----CCCH--------HHHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHHCCB-TTBCCCHHHH
T ss_pred             hccCc----ccch--------hhHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHHhhc-cCCCCCHHHH
Confidence            32211    0111        123456667778888888888887653       23689999998754 3456899999


Q ss_pred             HHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcccccccCCChhHHHHHHhhhcCCCCCCCcC
Q 009821          310 KALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLPYLEAIVKETLRLHPPAPLLT  389 (524)
Q Consensus       310 ~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~  389 (524)
                      .+++. .+++||+|||+++++|++++|++||++|+|+++|++                  |++|||+|+||++|+++. +
T Consensus       221 ~~~~~-~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~~~-~  280 (398)
T 2xkr_A          221 VMETL-LILIGGDETTRHTLSGGTEQLLRNRDQWDLLQRDPS------------------LLPGAIEEMLRWTAPVKN-M  280 (398)
T ss_dssp             HHHHH-HHHHHHSHHHHHHHHHHHHHHHHSHHHHHHHHHCGG------------------GHHHHHHHHHHHHCSBCE-E
T ss_pred             HHHHH-HHHHHhhHHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------HHHHHHHHHHhhcccccC-c
Confidence            99998 999999999999999999999999999999999975                  899999999999999998 7


Q ss_pred             ccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCcccCCccceeecCCCCCCCCCHHHHHH
Q 009821          390 SRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGDFRGNNFNYLPFGSGRRICPGIPLAEK  469 (524)
Q Consensus       390 ~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~  469 (524)
                      +|.+.+|++++||.||||+.|.++.+++||||++|+||++||||||..            .++|||+|+|.|+|++||.+
T Consensus       281 ~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~------------~~l~FG~G~r~C~G~~lA~~  348 (398)
T 2xkr_A          281 CRVLTADTEFHGTALCAGEKMMLLFESANFDEAVFCEPEKFDVQRNPN------------SHLAFGFGTHFCLGNQLARL  348 (398)
T ss_dssp             EEEESSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTCSSC------------CCCTTCCSTTCCTTHHHHHH
T ss_pred             ceEECCCeeECCEEECCCCEEEeChhhhcCChhhCCCCCeeCCCCCCC------------CCCcCCCCCcCCcCHHHHHH
Confidence            999999999999999999999999999999999999999999999741            38999999999999999999


Q ss_pred             HHHHHHHHHhhhc-eeeCCCCCCCCcc-cccccccccCCCceeeeecCC
Q 009821          470 IVPHVLANLLHLF-EWSLPEGTKFDLS-DKLLMALKKSEPLVVIPTPRS  516 (524)
Q Consensus       470 e~~~~l~~ll~~f-~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~r~  516 (524)
                      |++++++.|+++| ++++.++.  ++. ...........+++|+++||.
T Consensus       349 e~~~~l~~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~~~lpv~~~p~~  395 (398)
T 2xkr_A          349 ELSLMTERVLRRLPDLRLVADD--SVLPLRPANFVSGLESMPVVFTPSP  395 (398)
T ss_dssp             HHHHHHHHHHHHSTTCEESCTT--CCCCBCCCSSBCCBSCCEEECCCCC
T ss_pred             HHHHHHHHHHHhCCCceECCCc--ceecccCcccccCccceeEEecCCC
Confidence            9999999999999 59987432  221 012333444566777777764


No 49 
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=100.00  E-value=1.4e-59  Score=459.37  Aligned_cols=396  Identities=15%  Similarity=0.143  Sum_probs=301.7

Q ss_pred             CCCCCCCCCCCCceecccccCCCChhHHHHHHHHHhCCeEEEe--------cCCeeEEEeCCHHHHHHHHHhccccccCC
Q 009821           50 STPPLPPGPRALPLVGNILSAEPNLHRYFTKLSQIYGPIFKFY--------LGRKLCIVIGSPSLAKQVLKEHDVVFANR  121 (524)
Q Consensus        50 ~~~~~ppgp~~~p~iG~~~~~~~~~~~~~~~~~~kyG~i~~~~--------~g~~~~vvv~dp~~i~~il~~~~~~~~~~  121 (524)
                      .....||+|..+++++.......+++.++.++ ++||||+++.        +|+.++++|++|+.++++++++. .|+++
T Consensus        15 ~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~l-r~~gPv~~~~~~~g~~~~lG~~~~~vv~~~~~v~~vl~~~~-~fs~~   92 (433)
T 3ivy_A           15 TTVPSPNLPPGFDFTDPAIYAERLPVAEFAEL-RSAAPIWWNGQDPGKGGGFHDGGFWAITKLNDVKEISRHSD-VFSSY   92 (433)
T ss_dssp             -----CCCCTTCCTTCHHHHTTCCCHHHHHHH-HHHCSEEEEECCTTCSTTCCSSEEEEECSHHHHHHHHHCTT-TEEST
T ss_pred             cccCCCCCCCCCCCCCHHHhhcCCccHHHHHH-HhcCCEEecccccccccccCCCCEEEEecHHHHHHHHcChh-hccCC
Confidence            34456777777887776665556789999999 8899999998        55578999999999999997763 46665


Q ss_pred             Ccccchh--------hhcc--CCcccccCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehhHH
Q 009821          122 DPSAAAS--------VLTY--GGKSIGASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVGEL  191 (524)
Q Consensus       122 ~~~~~~~--------~~~~--~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~  191 (524)
                      +......        ....  .+....+|+.|+++|+.+. +.|+...++.+.+.+.+.++++++.+..  ++++|+...
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~--~~~~d~~~~  169 (433)
T 3ivy_A           93 ENGVIPRFKNDIAREDIEVQRFVMLNMDAPHHTRLRKIIS-RGFTPRAVGRLHDELQERAQKIAAEAAA--AGSGDFVEQ  169 (433)
T ss_dssp             TTCSCCCCCTTCCHHHHHGGGGSGGGCCTTHHHHHHHHHG-GGSCHHHHHTTHHHHHHHHHHHHHHHHH--HCEEEHHHH
T ss_pred             cccccccccccccccccccccCCccccChHHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHhh--CCCeeHHHH
Confidence            5332211        1111  1222339999999999996 8999999999999999999999999875  467998888


Q ss_pred             H-HHHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHh
Q 009821          192 M-FLTSLDVATRMLWGASLRGEDWDAVAIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESL  270 (524)
Q Consensus       192 ~-~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~  270 (524)
                      + ..+++++++++ ||.+..      ....+...    ...+.    ....|....       .+..+..+.+.+++.+.
T Consensus       170 ~~~~~~~~vi~~l-~G~~~~------~~~~~~~~----~~~~~----~~~~p~~~~-------~~~~~~~~~~~~~~~~~  227 (433)
T 3ivy_A          170 VSCELPLQAIAGL-LGVPQE------DRGKLFHW----SNEMT----GNEDPEYAH-------IDPKASSAELIGYAMKM  227 (433)
T ss_dssp             TTSHHHHHHHHHH-HTCCHH------HHHHHHHH----HTTCS----CCCCGGGTT-------CCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH-cCCCHH------HHHHHHHH----HHHHh----ccCCchhhh-------HHHHHHHHHHHHHHHHH
Confidence            7 99999999996 886421      11222221    11111    111222111       13455667788888888


Q ss_pred             hccccCCCCCCCCCCcccHHHHHHHHhhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHH
Q 009821          271 LRPGQSGQDMNEGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNEL  350 (524)
Q Consensus       271 i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei  350 (524)
                      +++++++       ..+|+++.|++...+ +..++++++.+++. .+++||+|||+++++|++++|++||++|+|+|+|+
T Consensus       228 i~~r~~~-------~~~dll~~ll~~~~~-~~~ls~~ei~~~~~-~ll~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~  298 (433)
T 3ivy_A          228 AEEKAKN-------PADDIVTQLIQADID-GEKLSDDEFGFFVV-MLAVAGNETTRNSITQGMMAFAEHPDQWELYKKVR  298 (433)
T ss_dssp             HHHC--------------CHHHHHSCC---CCCCCHHHHHHHHH-HHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHHHHC
T ss_pred             HHHHhcC-------CCCcHHHHHHhhhcC-CCCCCHHHHHHHHH-HHHHhhhHHHHHHHHHHHHHHHHCHHHHHHHHhCc
Confidence            8877643       236899999986543 35699999999998 99999999999999999999999999999999998


Q ss_pred             HHhhcCCCcccccccCCChhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCC
Q 009821          351 EQVVARDSVVEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDF  430 (524)
Q Consensus       351 ~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F  430 (524)
                      +                    ++||+|+||++|+++. ++|.+.+|++++||.||||+.|.++.+++||||++|+||++|
T Consensus       299 ~--------------------~a~i~E~LRl~p~~~~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~f~dp~~F  357 (433)
T 3ivy_A          299 P--------------------ETAADEIVRWATPVTA-FQRTALRDYELSGVQIKKGQRVVMFYRSANFDEEVFQDPFTF  357 (433)
T ss_dssp             C--------------------TTHHHHHHHHHCSBCE-EEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSC
T ss_pred             c--------------------cchhHHHhhhCcchhc-eeeEECCCEEECCEEECCCCEEEEChhhhcCCchhCCCcCcc
Confidence            5                    5899999999999998 689999999999999999999999999999999999999999


Q ss_pred             CCCccccccCCCcccCCccceeecC-CCCCCCCCHHHHHHHHHHHHHHHhhhce-eeCCCCCCCCcccccccccccCCCc
Q 009821          431 QPDRFLEDVKIGDFRGNNFNYLPFG-SGRRICPGIPLAEKIVPHVLANLLHLFE-WSLPEGTKFDLSDKLLMALKKSEPL  508 (524)
Q Consensus       431 ~PeR~~~~~~~~~~~~~~~~~~pFg-~G~r~C~G~~~A~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~  508 (524)
                      |||||.            ..++||| +|+|.|+|++||.+|++++++.|+++|+ ++++++....    ..........+
T Consensus       358 ~p~R~~------------~~~l~FGg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~----~~~~~~g~~~l  421 (433)
T 3ivy_A          358 NILRNP------------NPHVGFGGTGAHYCIGANLARMTINLIFNAVADHMPDLKPISAPERL----RSGWLNGIKHW  421 (433)
T ss_dssp             CTTCCS------------CCCCTTCSSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCCEEC----CCSSBCCEEEC
T ss_pred             CCCCCC------------CCCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCccEECCCCcee----ccCcccCccee
Confidence            999984            2589999 9999999999999999999999999999 9987542211    12222333568


Q ss_pred             eeeeecCCCc
Q 009821          509 VVIPTPRSLS  518 (524)
Q Consensus       509 ~v~~~~r~~~  518 (524)
                      +|++++|++-
T Consensus       422 pv~~~~R~~~  431 (433)
T 3ivy_A          422 QVDYTGRCPV  431 (433)
T ss_dssp             EEESCC----
T ss_pred             EEEEeccccC
Confidence            8999998763


No 50 
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00  E-value=6.8e-60  Score=458.42  Aligned_cols=378  Identities=16%  Similarity=0.197  Sum_probs=302.7

Q ss_pred             cCCCChhHHHHHHHHHhCCeEEEec-CCeeEEEeCCHHHHHHHHHhccccccCCCc-ccch---h------hh---c-cC
Q 009821           69 SAEPNLHRYFTKLSQIYGPIFKFYL-GRKLCIVIGSPSLAKQVLKEHDVVFANRDP-SAAA---S------VL---T-YG  133 (524)
Q Consensus        69 ~~~~~~~~~~~~~~~kyG~i~~~~~-g~~~~vvv~dp~~i~~il~~~~~~~~~~~~-~~~~---~------~~---~-~~  133 (524)
                      .+..+++..+.++ ++||||+++++ ++.++++++||+.+++++.++.  ++++.. ....   .      ..   . ..
T Consensus        14 ~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (411)
T 1gwi_A           14 PFVTDLDGESARL-RAAGPLAAVELPGGVPVWAVTHHAEAKALLTDPR--LVKDINVWGAWRRGEIPADWPLIGLANPGR   90 (411)
T ss_dssp             TTCSCHHHHHHHH-HHTCSEEEEEETTTEEEEEECSHHHHHHHHTCTT--EECCGGGCHHHHTTCSCTTCTTHHHHSCCS
T ss_pred             cccCChHHHHHHH-HHhCCeeeeecCCCccEEEEeCHHHHHHHHcCCc--cccCcccccccccccCCcccchhhhhcccc
Confidence            4567899999999 99999999997 8899999999999999998764  333320 1000   0      00   1 12


Q ss_pred             CcccccCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehhHHHH-HHHHHHHHHHHhccCCCCC
Q 009821          134 GKSIGASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVGELMF-LTSLDVATRMLWGASLRGE  212 (524)
Q Consensus       134 ~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~~-~~~~dvi~~~~fG~~~~~~  212 (524)
                      +....+|+.|+++|+.+. +.|+...++.+.+.+.+.++++++.+.. .++++|+...+. .+++++++. +||.+..+ 
T Consensus        91 ~l~~~~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~-~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~-  166 (411)
T 1gwi_A           91 SMLTVDGAEHRRLRTLVA-QALTVRRVEHMRGRITELTDRLLDELPA-DGGVVDLKAAFAYPLPMYVVAD-LMGIEEAR-  166 (411)
T ss_dssp             SGGGCCHHHHHHHHHHHT-TTSCHHHHHTTHHHHHHHHHHHHHTSCC-SCCCEEHHHHTTTHHHHHHHHH-HHTCCGGG-
T ss_pred             ccccCCcHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHHHH-cCCCcchHHHHhhHHHHHHHHH-HhCCCHHH-
Confidence            222338899999999997 8999999999999999999999999873 367899988776 599999996 79987532 


Q ss_pred             CchHHHHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcccHHHH
Q 009821          213 DWDAVAIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSSKDFLQT  292 (524)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~  292 (524)
                           ...+......++..    .    .          ..++..+..+.+.+++.+.+++++++.       ..|+++.
T Consensus       167 -----~~~~~~~~~~~~~~----~----~----------~~~~~~~~~~~~~~~~~~~i~~r~~~~-------~~d~l~~  216 (411)
T 1gwi_A          167 -----LPRLKVLFEKFFST----Q----T----------PPEEVVATLTELASIMTDTVAAKRAAP-------GDDLTSA  216 (411)
T ss_dssp             -----HHHHHHHHHHHHCT----T----S----------CHHHHHHHHHHHHHHHHHHHHHHHHSC-------CSSHHHH
T ss_pred             -----HHHHHHHHHHHhcc----C----C----------ChHHHHHHHHHHHHHHHHHHHHHHhCC-------CCCHHHH
Confidence                 13344444333220    0    0          013455677778888888888776431       3689999


Q ss_pred             HHHHhhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcccccccCCChhHH
Q 009821          293 LLELQQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLPYLE  372 (524)
Q Consensus       293 ll~~~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~  372 (524)
                      +++..+ ++..++++++.+++. .+++||+|||+++++|++++|++||++|+|+++|+                  +|++
T Consensus       217 ll~~~~-~~~~l~~~~i~~~~~-~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~------------------~~l~  276 (411)
T 1gwi_A          217 LIQASE-NGDHLTDAEIVSTLQ-LMVAAGHETTISLIVNAVVNLSTHPEQRALVLSGE------------------AEWS  276 (411)
T ss_dssp             HHHCCB-TTBCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTS------------------SCHH
T ss_pred             HHHhcc-cCCCCCHHHHHHHHH-HHHHHHhhHHHHHHHHHHHHHHhChHHHHHHHcCh------------------HHHH
Confidence            998754 245689999999998 99999999999999999999999999999999873                  3799


Q ss_pred             HHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCC-CCCCCCCCCccccccCCCcccCCccce
Q 009821          373 AIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLEDVKIGDFRGNNFNY  451 (524)
Q Consensus       373 a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~-~dp~~F~PeR~~~~~~~~~~~~~~~~~  451 (524)
                      |||+|+||++|+++..++|.+.+|++++||.||||+.|.++.+++||||++| +||++||||||..           ..+
T Consensus       277 a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeRf~~-----------~~~  345 (411)
T 1gwi_A          277 AVVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERAHGPTADRFDLTRTSG-----------NRH  345 (411)
T ss_dssp             HHHHHHHHHSCSBCCEEEEEESSCEEETTEEECTTCEEEECHHHHTTCHHHHCGGGGSCCTTCCCS-----------SCC
T ss_pred             HHHHHHHHhCCcccCCceeeeCCCeEECCEEECCCCEEEecHHHhcCChhhcCCChhhcCCCCCCC-----------CCc
Confidence            9999999999999976789999999999999999999999999999999999 9999999999951           358


Q ss_pred             eecCCCCCCCCCHHHHHHHHHHHHHHHhhhc-eeeCCCC-CCCCcccccccccccCCCceeeeecCC
Q 009821          452 LPFGSGRRICPGIPLAEKIVPHVLANLLHLF-EWSLPEG-TKFDLSDKLLMALKKSEPLVVIPTPRS  516 (524)
Q Consensus       452 ~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~r~  516 (524)
                      +|||+|+|.|+|++||.+|++++++.|+++| ++++..+ .++++.  ...+..+...++|++++|.
T Consensus       346 lpFG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~--~~~~~~~~~~lpv~~~~r~  410 (411)
T 1gwi_A          346 ISFGHGPHVCPGAALSRMEAGVALPALYARFPHLDLAVPAAELRNK--PVVTQNDLFELPVRLAHHH  410 (411)
T ss_dssp             CTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBC--SCTTBCCBSCCEEESSCC-
T ss_pred             ccCCCCcccCCCHHHHHHHHHHHHHHHHHhCccceeCCCccccccc--ccccccCcceeEEEecCCC
Confidence            9999999999999999999999999999999 7998643 233332  2344556678999998884


No 51 
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=100.00  E-value=5e-59  Score=451.16  Aligned_cols=373  Identities=17%  Similarity=0.203  Sum_probs=298.1

Q ss_pred             CChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCcccch-------hhhc--cCCcccccCCc
Q 009821           72 PNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAAA-------SVLT--YGGKSIGASPE  142 (524)
Q Consensus        72 ~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~-------~~~~--~~~~~~~~~~~  142 (524)
                      .+++.++.++ ++||||++ +  +.+.++|+||+.+++++.++  .|.++......       ....  ..+....+|+.
T Consensus        13 ~~p~~~~~~l-~~yGpv~~-~--g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~   86 (397)
T 3buj_A           13 RDPYPSYHWL-LRHDPVHR-G--AHRVWYVSRFADVRAVLGDE--RFARTGIRRFWTDLVGPGLLAEIVGDIILFQDEPD   86 (397)
T ss_dssp             HCCHHHHHHH-HHHCSEEE-C--GGGCEEECSHHHHHHHHTCT--TEESHHHHHHHHHHHCSSHHHHHHTTCGGGCCTTH
T ss_pred             cCchHHHHHH-HhcCCeee-C--CCCeEEEcCHHHHHHHHcCC--CcccCcccccccccccccccccccccccccCCchh
Confidence            4678888877 69999998 6  47899999999999999863  35554321100       0111  22233338999


Q ss_pred             hHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehh-HHHHHHHHHHHHHHHhccCCCCCCchHHHHHH
Q 009821          143 WPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVG-ELMFLTSLDVATRMLWGASLRGEDWDAVAIQF  221 (524)
Q Consensus       143 w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~-~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~  221 (524)
                      |+++|+.+. +.|+...++.+.+.+.+.++++++.+..  ++++|+. ++...+++++++.+ ||.+++..      ..+
T Consensus        87 h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~--~~~~dl~~~~~~~~~~~vi~~~-~G~~~~~~------~~~  156 (397)
T 3buj_A           87 HGRLRGVVG-PAFSPSALRRLEPVIAGTVDDLLRPALA--RGAMDVVDELAYPLALRAVLGL-LGLPAADW------GAV  156 (397)
T ss_dssp             HHHHHHHHG-GGSSTTTTGGGHHHHHHHHHHHHHHHHT--TTEEEHHHHTHHHHHHHHHHHH-HTCCGGGH------HHH
T ss_pred             HHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHHhh--cCCeehHHHHHHHhHHHHHHHH-hCCCHHHH------HHH
Confidence            999999997 8999999999999999999999999875  4589986 45678999999998 99876421      234


Q ss_pred             HHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcccHHHHHHHHhhcCC
Q 009821          222 REVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSSKDFLQTLLELQQQGD  301 (524)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~  301 (524)
                      ......+......        .   +. ....++..+..+.+.+++.+.+++++++.       ..|+++.|++..++ +
T Consensus       157 ~~~~~~~~~~~~~--------~---~~-~~~~~~~~~~~~~~~~~~~~~i~~r~~~~-------~~dll~~ll~~~~~-~  216 (397)
T 3buj_A          157 GRWSRDVGRTLDR--------G---AS-AEDMRRGHAAIAEFADYVERALARRRREG-------GEDLLALMLDAHDR-G  216 (397)
T ss_dssp             HHHHHHHHGGGCS--------S---CC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------CCSHHHHHHHHHHT-T
T ss_pred             HHHHHHHHhhcCC--------C---CC-hHHHHHHHHHHHHHHHHHHHHHHHHHcCC-------CCCHHHHHHHhhhc-C
Confidence            4444433322111        0   11 11234556677888888888888876531       35899999987643 3


Q ss_pred             CCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcccccccCCChhHHHHHHhhhcC
Q 009821          302 YSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLPYLEAIVKETLRL  381 (524)
Q Consensus       302 ~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl  381 (524)
                      . ++++++.+++. .+++||+|||+++++|++++|++||++|+|+++|++                  |++|||+|+||+
T Consensus       217 ~-ls~~ei~~~~~-~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl  276 (397)
T 3buj_A          217 L-MSRNEIVSTVV-TFIFTGHETVASQVGNAVLSLLAHPDQLDLLRRRPD------------------LLAQAVEECLRY  276 (397)
T ss_dssp             S-SCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHCGG------------------GHHHHHHHHHHH
T ss_pred             C-CCHHHHHHHHH-HHHHcCchHHHHHHHHHHHHHHhCHHHHHHHhhCHH------------------HHHHHHHHHHhh
Confidence            3 89999999999 999999999999999999999999999999999963                  899999999999


Q ss_pred             CCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCcccCCccceeecCCCCCCC
Q 009821          382 HPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGDFRGNNFNYLPFGSGRRIC  461 (524)
Q Consensus       382 ~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~~~~~~~~~pFg~G~r~C  461 (524)
                      +|+++ .++|.+.+|++++||.||||+.|.++.+++||||++|+||++||||||.            ..++|||+|+|.|
T Consensus       277 ~p~~~-~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~------------~~~~~FG~G~r~C  343 (397)
T 3buj_A          277 DPSVQ-SNTRQLDVDVELRGRRLRRDDVVVVLAGAANRDPRRYDRPDDFDIERDP------------VPSMSFGAGMRYC  343 (397)
T ss_dssp             SCSCC-EEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTCSSTTSCCTTSCC------------CCCSTTCCGGGCC
T ss_pred             cCccc-CcceEECCCEEECCEEECCCCEEEEChhhhCCCccccCCccccCCCCCC------------CCCCCCCCCCccC
Confidence            99999 4799999999999999999999999999999999999999999999995            1479999999999


Q ss_pred             CCHHHHHHHHHHHHHHHhhhc-eeeCCCC-CCCCcccccccccccCCCceeeeecCC
Q 009821          462 PGIPLAEKIVPHVLANLLHLF-EWSLPEG-TKFDLSDKLLMALKKSEPLVVIPTPRS  516 (524)
Q Consensus       462 ~G~~~A~~e~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~r~  516 (524)
                      +|++||.+|++++++.| ++| ++++.++ .++.+.  ...+..+..+++|+++||.
T Consensus       344 ~G~~lA~~e~~~~l~~l-~~f~~~~~~~~~~~~~~~--~~~~~~~~~~l~v~~~~rg  397 (397)
T 3buj_A          344 LGSYLARTQLRAAVAAL-ARLPGLRLGCASDALAYQ--PRTMFRGLASLPIAFTPGG  397 (397)
T ss_dssp             TTHHHHHHHHHHHHHHH-HTSTTCEESSCSTTCCBC--SCSSCCCBSCCEEECCTTC
T ss_pred             CCHHHHHHHHHHHHHHH-hcCCCceeCCCCcccccc--cccccCCCcceeEEecCCC
Confidence            99999999999999999 999 8998765 333332  2345556788999999874


No 52 
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=100.00  E-value=3.9e-59  Score=453.26  Aligned_cols=372  Identities=19%  Similarity=0.236  Sum_probs=294.2

Q ss_pred             CCCChhHHHHHHHHHhCCeEEEec-CCeeEEEeCCHHHHHHHHHhccccccCCCcc-cch---hh-hccCCcccccCCch
Q 009821           70 AEPNLHRYFTKLSQIYGPIFKFYL-GRKLCIVIGSPSLAKQVLKEHDVVFANRDPS-AAA---SV-LTYGGKSIGASPEW  143 (524)
Q Consensus        70 ~~~~~~~~~~~~~~kyG~i~~~~~-g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~-~~~---~~-~~~~~~~~~~~~~w  143 (524)
                      +..+++.++.++ ++||||+++++ ++.+.++++||+.+++++.++.  |.+++.. ...   .. ....+....+|+.|
T Consensus        35 ~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~i~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h  111 (417)
T 2y5n_A           35 HGLTLAGRYGEL-QETEPVSRVRPPYGEEAWLVTRYEDVRAVLGDGR--FVRGPSMTRDEPRTRPEMVKGGLLSMDPPEH  111 (417)
T ss_dssp             SSCCCCHHHHHH-HHHCSEEEEECSBSCCEEEECSHHHHHHHHTCTT--EESGGGGTSCCCBSSSSCCCCSGGGCCTTHH
T ss_pred             hccCchHHHHHH-HhcCCeEeeccCCCceEEEECCHHHHHHHHcCCC--cccCccccccccccCcccccccCccCCchHH
Confidence            456889999999 89999999997 7889999999999999998753  5554332 111   01 11122223389999


Q ss_pred             HHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehhHHH-HHHHHHHHHHHHhccCCCCCCchHHHHHHH
Q 009821          144 PKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVGELM-FLTSLDVATRMLWGASLRGEDWDAVAIQFR  222 (524)
Q Consensus       144 ~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~-~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~  222 (524)
                      +++|+.+. +.|+...++.+.+.+.+.++++++.+.. ++.++|+...+ ..+++++++. +||.++.+      ...+.
T Consensus       112 ~~~R~~l~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~-~~~~vdl~~~~~~~~~~~vi~~-~~G~~~~~------~~~~~  182 (417)
T 2y5n_A          112 SRLRRLVV-KAFTARRAESLRPRAREIAHELVDQMAA-TGQPADLVAMFARQLPVRVICE-LLGVPSAD------HDRFT  182 (417)
T ss_dssp             HHHHHHHH-HHSCHHHHHHTHHHHHHHHHHHHHHHHH-HCSSEEHHHHTTTTHHHHHHHH-HHTCCGGG------HHHHH
T ss_pred             HHHHHHHh-hhcCHHHHHHHHHHHHHHHHHHHHHHHh-CCCCeeHHHHHHHHhHHHHHHH-HcCCCHHH------HHHHH
Confidence            99999997 7899999999999999999999999875 22389998765 5699999998 68987632      12333


Q ss_pred             HHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcccHHHHHHHHhhcCCC
Q 009821          223 EVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSSKDFLQTLLELQQQGDY  302 (524)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~  302 (524)
                      .....++    ..     +.    .    ..++..+..+.+.+++.+.++++++..       ..|+++.+++... ++.
T Consensus       183 ~~~~~~~----~~-----~~----~----~~~~~~~~~~~l~~~~~~~i~~r~~~~-------~~dll~~ll~~~~-~~~  237 (417)
T 2y5n_A          183 RWSGAFL----ST-----AE----V----TAEEMQEAAEQAYAYMGDLIDRRRKEP-------TDDLVSALVQARD-QQD  237 (417)
T ss_dssp             HHHHTTS----TT-----CC----C----CHHHHHHHHHHHHHHHHHHHHHHHHSC-------CSSHHHHHHHCCB-TTB
T ss_pred             HHHHHHh----cc-----cC----C----CHHHHHHHHHHHHHHHHHHHHHHHhCC-------CCCHHHHHHhhhc-cCC
Confidence            3222111    10     00    0    024556677788888888888876532       3589999998754 344


Q ss_pred             CCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcccccccCCChhHHHHHHhhhcCC
Q 009821          303 SLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLPYLEAIVKETLRLH  382 (524)
Q Consensus       303 ~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~  382 (524)
                      .++++++.+++. .+++||+|||+++++|++++|++||++|+|+|+|++                  |++|||+|+||++
T Consensus       238 ~ls~~ei~~~~~-~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~  298 (417)
T 2y5n_A          238 SLSEQELLDLAI-GLLVAGYESTTTQIADFVYLLMTRPELRRQLLDRPE------------------LIPSAVEELTRWV  298 (417)
T ss_dssp             CCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GHHHHHHHHHHHC
T ss_pred             CCCHHHHHHHHH-HHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------HHHHHHHHHHHhc
Confidence            689999999999 999999999999999999999999999999999853                  7999999999999


Q ss_pred             CCCC-CcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCcccCCccceeecCCCCCCC
Q 009821          383 PPAP-LLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGDFRGNNFNYLPFGSGRRIC  461 (524)
Q Consensus       383 p~~~-~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~~~~~~~~~pFg~G~r~C  461 (524)
                      |+++ ..++|.+.+|++++||.||||+.|.++.+++||||++|+||++||||||.            ..++|||+|+|.|
T Consensus       299 p~~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~------------~~~lpFG~G~r~C  366 (417)
T 2y5n_A          299 PLGVGTAFPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDADRIDVDRTP------------NQHLGFGHGVHHC  366 (417)
T ss_dssp             CCBSSCCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCSS------------CCCCTTCCSTTSC
T ss_pred             CCccccccceEeCCCEEECCEEECCCCEEEeChhhhCCCcccCCCccccCCCCCC------------CCcCCCCCCCcCC
Confidence            9999 45899999999999999999999999999999999999999999999983            2589999999999


Q ss_pred             CCHHHHHHHHHHHHHHHhhhc-eeeCCCC-CCCCcccccccccccCCCceee
Q 009821          462 PGIPLAEKIVPHVLANLLHLF-EWSLPEG-TKFDLSDKLLMALKKSEPLVVI  511 (524)
Q Consensus       462 ~G~~~A~~e~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~  511 (524)
                      +|++||.+|++++++.|+++| ++++.++ .++.+..  ..+......++|+
T Consensus       367 ~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~--~~~~~~~~~lpv~  416 (417)
T 2y5n_A          367 LGAPLARVELQVALEVLLQRLPGIRLGIPETQLRWSE--GMLLRGPLELPVV  416 (417)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCC--CSSBCCBSCCEEE
T ss_pred             cCHHHHHHHHHHHHHHHHHhCCCcEeCCCCccceecc--CcccCCcceeEEe
Confidence            999999999999999999999 5998754 2333322  2333344555554


No 53 
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=100.00  E-value=8.7e-59  Score=450.25  Aligned_cols=371  Identities=17%  Similarity=0.229  Sum_probs=298.6

Q ss_pred             CCCChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCcc--c----c------h-hh---hccC
Q 009821           70 AEPNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPS--A----A------A-SV---LTYG  133 (524)
Q Consensus        70 ~~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~--~----~------~-~~---~~~~  133 (524)
                      +..+++.++.++ ++|||||++++++.+.++++||+.+++++.++  .|++++..  .    .      . ..   ....
T Consensus        12 ~~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (404)
T 1z8o_A           12 FHVDWYRTYAEL-RETAPVTPVRFLGQDAWLVTGYDEAKAALSDL--RLSSDPKKKYPGVEVEFPAYLGFPEDVRNYFAT   88 (404)
T ss_dssp             GTSSHHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHHCT--TEECCTTCCCTTCCCCCGGGTTCCHHHHHHHSS
T ss_pred             cccCcHHHHHHH-HhcCCeeeecCCCceEEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccchhhhccc
Confidence            456899999999 99999999999999999999999999999887  36665432  1    0      0 11   0122


Q ss_pred             CcccccCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehhHH-HHHHHHHHHHHHHhccCCCCC
Q 009821          134 GKSIGASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVGEL-MFLTSLDVATRMLWGASLRGE  212 (524)
Q Consensus       134 ~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~-~~~~~~dvi~~~~fG~~~~~~  212 (524)
                      +....+|+.|+++|+.+. +.|+...++.+.+.+.+.++++++.+..  ++++|+... ...+++++++.+ ||.+..+.
T Consensus        89 ~l~~~~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~--~~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~  164 (404)
T 1z8o_A           89 NMGTSDPPTHTRLRKLVS-QEFTVRRVEAMRPRVEQITAELLDEVGD--SGVVDIVDRFAHPLPIKVICEL-LGVDEKYR  164 (404)
T ss_dssp             SGGGCCTTHHHHHHHHHH-TTSCHHHHHHTHHHHHHHHHHHHHTSCS--SSEEEHHHHTTTHHHHHHHHHH-TTCCGGGT
T ss_pred             ccccCCCcHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHhhhh--cCCcchHHHHhHHHHHHHHHHH-hCCCHHHH
Confidence            223338999999999997 8999999999999999999999998865  568999865 468999999984 99876432


Q ss_pred             CchHHHHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcccHHHH
Q 009821          213 DWDAVAIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSSKDFLQT  292 (524)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~  292 (524)
                      +      .+......++.    .    ..|        . .++..+..+.+.+++.+.+++++++.       ..|+++.
T Consensus       165 ~------~~~~~~~~~~~----~----~~p--------~-~~~~~~~~~~~~~~~~~~i~~r~~~~-------~~dll~~  214 (404)
T 1z8o_A          165 G------EFGRWSSEILV----M----DPE--------R-AEQRGQAAREVVNFILDLVERRRTEP-------GDDLLSA  214 (404)
T ss_dssp             T------THHHHHHHHHC----C----CGG--------G-HHHHHHHHHHHHHHHHHHHHHHHHSC-------CSSHHHH
T ss_pred             H------HHHHHHHHHhc----c----CCh--------h-HHHHHHHHHHHHHHHHHHHHHHHhCC-------CCCHHHH
Confidence            1      23333333321    1    011        1 34566777788888888888876532       3589999


Q ss_pred             HHHH-hhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcccccccCCChhH
Q 009821          293 LLEL-QQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLPYL  371 (524)
Q Consensus       293 ll~~-~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl  371 (524)
                      +++. .. ++..++++++.+++. .+++||+|||+++++|++++|++||++|+|+++|++                  |+
T Consensus       215 ll~~~~~-~~~~l~~~ei~~~~~-~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l  274 (404)
T 1z8o_A          215 LIRVQDD-DDGRLSADELTSIAL-VLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDPS------------------AL  274 (404)
T ss_dssp             HHHCEET-TTEECCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GH
T ss_pred             HHhhhcc-cCCCCCHHHHHHHHH-HHHhcchHHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------hH
Confidence            9986 43 334689999999998 999999999999999999999999999999999853                  79


Q ss_pred             HHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCcccCCccce
Q 009821          372 EAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGDFRGNNFNY  451 (524)
Q Consensus       372 ~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~~~~~~~~  451 (524)
                      +|||+|+||++|+++ .++|.+.+|++++||.||||+.|.++.+++||||++|+||++||||||.            ..+
T Consensus       275 ~a~i~E~lRl~p~~~-~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rd~~~~~dP~~F~PeR~~------------~~~  341 (404)
T 1z8o_A          275 PNAVEEILRYIAPPE-TTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTRDT------------RGH  341 (404)
T ss_dssp             HHHHHHHHHHTCSSC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC------------TTC
T ss_pred             HHHHHHHHHhcCCcc-CcceEECCCEEECCEEECCCCEEEecchhhcCCcccCCChhhcCCCCCC------------CCc
Confidence            999999999999999 4799999999999999999999999999999999999999999999984            248


Q ss_pred             eecCCCCCCCCCHHHHHHHHHHHHHHHhhhc-eeeCCCC-CCCCcccccccccccCCCceeee
Q 009821          452 LPFGSGRRICPGIPLAEKIVPHVLANLLHLF-EWSLPEG-TKFDLSDKLLMALKKSEPLVVIP  512 (524)
Q Consensus       452 ~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~  512 (524)
                      +|||+|+|.|+|++||.+|++++++.|+++| ++++.++ .++.+..  ..+.....+++|++
T Consensus       342 ~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~~--~~~~~~~~~l~v~~  402 (404)
T 1z8o_A          342 LSFGQGIHFCMGRPLAKLEGEVALRALFGRFPALSLGIDADDVVWRR--SLLLRGIDHLPVRL  402 (404)
T ss_dssp             CTTCSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCCCC--CSSSCCCSCCEEET
T ss_pred             cCCCCCCccCCcHHHHHHHHHHHHHHHHHhCCCcEecCCCCcceecc--ccccCCcceeEEEe
Confidence            9999999999999999999999999999999 5898754 2333322  34445556677764


No 54 
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=100.00  E-value=2.1e-59  Score=455.07  Aligned_cols=373  Identities=16%  Similarity=0.197  Sum_probs=295.1

Q ss_pred             CChhHHHHHHHHHhCCeE-----EEecCCeeEEEeCCHHHHHHHHHhccccccCCCccc-chh--hh-c---cCCccccc
Q 009821           72 PNLHRYFTKLSQIYGPIF-----KFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSA-AAS--VL-T---YGGKSIGA  139 (524)
Q Consensus        72 ~~~~~~~~~~~~kyG~i~-----~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~-~~~--~~-~---~~~~~~~~  139 (524)
                      .+++.++.++ ++|||||     ++++  .+.++|+||+.+++++.++ ..|++++... ...  .+ .   ..+....+
T Consensus        25 ~~p~~~~~~l-~~~Gpv~~~~~~~~~~--~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~l~~~~  100 (414)
T 2uuq_A           25 PNPWPMYRAL-RDHDPVHHVVPPQRPE--YDYYVLSRHADVWSAARDH-QTFSSAQGLTVNYGELEMIGLHDTPPMVMQD  100 (414)
T ss_dssp             TCCHHHHHHH-HHHCSEEEECCTTCGG--GCEEEECSHHHHHHHHHCT-TTEESTTCSSSCTTHHHHHTCSSSCCGGGCC
T ss_pred             cCchHHHHHH-HhcCCEEcccccccCC--CCEEEEcCHHHHHHHHcCc-hhccCCCCcccccCcccccccccccccccCC
Confidence            5788999998 5799999     8876  5789999999999999986 4577765432 111  22 1   12222338


Q ss_pred             CCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehh-HHHHHHHHHHHHHHHhccCCCCCCchHHH
Q 009821          140 SPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVG-ELMFLTSLDVATRMLWGASLRGEDWDAVA  218 (524)
Q Consensus       140 ~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~-~~~~~~~~dvi~~~~fG~~~~~~~~~~~~  218 (524)
                      |+.|+++|+.+. +.|+...++.+.+.+.+.++++++.+.+  ++++|+. +++..+++++++. +||.++++  .    
T Consensus       101 g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~--~~~vdl~~~~~~~~~~~vi~~-~~G~~~~~--~----  170 (414)
T 2uuq_A          101 PPVHTEFRKLVS-RGFTPRQVETVEPTVRKFVVERLEKLRA--NGGGDIVTELFKPLPSMVVAH-YLGVPEED--W----  170 (414)
T ss_dssp             TTHHHHHHHHHH-TTSSHHHHHHHHHHHHHHHHHHHHHHHH--TTEEEHHHHTTTHHHHHHHHH-HTTCCGGG--H----
T ss_pred             chhHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHh--cCCccHHHHHHHHhHHHHHHH-HhCCCHHH--H----
Confidence            999999999997 8999999999999999999999999976  3469996 5678999999999 68987752  1    


Q ss_pred             HHHHHHHHHHHHHhcCCCccccc-ccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcccHHHHHHHHh
Q 009821          219 IQFREVLEEMFQVLGSGNISDLF-PLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSSKDFLQTLLELQ  297 (524)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~-p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~  297 (524)
                      ..+......++..       ..+ |..         ++..+..+.+.+++.+.+++++++       ...|+++.+++..
T Consensus       171 ~~~~~~~~~~~~~-------~~~~p~~---------~~~~~~~~~~~~~~~~~i~~r~~~-------~~~dll~~ll~~~  227 (414)
T 2uuq_A          171 TQFDGWTQAIVAA-------NAVDGAT---------TGALDAVGSMMAYFTGLIERRRTE-------PADDAISHLVAAG  227 (414)
T ss_dssp             HHHHHHHHHHHHH-------HHC--------------CCHHHHHHHHHHHHHHHHHHTTS-------CCSSHHHHHHHTT
T ss_pred             HHHHHHHHHHHhh-------cccCCch---------hHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHhcc
Confidence            2344443333321       011 211         112345566777888888777653       2368999999875


Q ss_pred             hc-CCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcccccccCCChhHHHHHH
Q 009821          298 QQ-GDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLPYLEAIVK  376 (524)
Q Consensus       298 ~~-~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~  376 (524)
                      .+ ++..++++++.+++. .+++||+|||+++++|++++|++||++|+|+++|+                  +|++|||+
T Consensus       228 ~~~~~~~ls~~ei~~~~~-~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~  288 (414)
T 2uuq_A          228 VGADGDTAGTLSILAFTF-TMVTGGNDTVTGMLGGSMPLLHRRPDQRRLLLDDP------------------EGIPDAVE  288 (414)
T ss_dssp             TTCTTCHHHHHHHHHHHH-HHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCG------------------GGHHHHHH
T ss_pred             cccCCCCCCHHHHHHHHH-HHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHhCH------------------HHHHHHHH
Confidence            32 334588999999998 99999999999999999999999999999999986                  28999999


Q ss_pred             hhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCC-CCCCCCCCCccccccCCCcccCCccceeecC
Q 009821          377 ETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLEDVKIGDFRGNNFNYLPFG  455 (524)
Q Consensus       377 E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~-~dp~~F~PeR~~~~~~~~~~~~~~~~~~pFg  455 (524)
                      |+||++|+++ .++|.+.+|++++||.||||+.|.++.+++||||++| +||++||||||.            ..++|||
T Consensus       289 E~lRl~p~~~-~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeR~~------------~~~~~FG  355 (414)
T 2uuq_A          289 ELLRLTSPVQ-GLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAAELDVTRCP------------RNILTFS  355 (414)
T ss_dssp             HHHHHHCSBC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCHHHHCTTTTSCCTTCCC------------CSCCTTC
T ss_pred             HHHHhCCCcC-CcceEECCCEEECCEEECCCCEEEeChhhhCCCHHHhCCCchhcCCCCCC------------CCCcCCC
Confidence            9999999999 4799999999999999999999999999999999999 999999999985            2489999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHhhhc-eeeCCCCCCCCcccccccccccCCCceeeeecCC
Q 009821          456 SGRRICPGIPLAEKIVPHVLANLLHLF-EWSLPEGTKFDLSDKLLMALKKSEPLVVIPTPRS  516 (524)
Q Consensus       456 ~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  516 (524)
                      +|+|.|+|++||.+|++++++.|+++| ++++.++ ++.+.  ...+..+..+++|+++||+
T Consensus       356 ~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~-~~~~~--~~~~~~~~~~lpv~~~~r~  414 (414)
T 2uuq_A          356 HGAHHCLGAAAARMQCRVALTELLARCPDFEVAES-RIVWS--GGSYVRRPLSVPFRVTSSR  414 (414)
T ss_dssp             SSTTCCTTHHHHHHHHHHHHHHHHHHCCSEEECGG-GCEEC--CCSSBCCEEECEEEEC---
T ss_pred             CCCccCCCHHHHHHHHHHHHHHHHHhCcccEECCC-Ccccc--ccccccCcceeEEEecCCC
Confidence            999999999999999999999999999 6998732 33332  2345556677889988874


No 55 
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=100.00  E-value=2.1e-59  Score=458.58  Aligned_cols=386  Identities=19%  Similarity=0.229  Sum_probs=293.4

Q ss_pred             CCChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCcccchhhhccCC-cccccCCchHHHHHH
Q 009821           71 EPNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAAASVLTYGG-KSIGASPEWPKLRQV  149 (524)
Q Consensus        71 ~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~w~~~R~~  149 (524)
                      ..+++.++.++ ++||||+++..++  .++|++|+.+++|+++++. |++++...........+ ....+|+.|+++|+.
T Consensus        52 ~~~p~~~~~~l-r~~gpv~~~~~~~--~~vv~~~~~v~~vl~~~~~-f~~~~~~~~~~~~~~~~~l~~~dg~~h~~~Rr~  127 (441)
T 3nc3_A           52 QNNPYAYFSQL-REEDPVHYEESID--SYFISRYHDVRYILQHPDI-FTTKSLVERAEPVMRGPVLAQMHGKEHSAKRRI  127 (441)
T ss_dssp             HHCGGGTHHHH-HHHCSEEEETTTT--EEEECCHHHHHHHHHCTTT-EECCCTTSCCCCSCC-------------CCHHH
T ss_pred             hcChHHHHHHH-HhcCCEEEeCCCC--EEEEcCHHHHHHHhcCccc-ccccccccccccccCCCccccCCcHHHHHHHHH
Confidence            34677888877 6899999987766  8999999999999988765 76665433222111111 222389999999999


Q ss_pred             HHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceeh-hHHHHHHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHH
Q 009821          150 LVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKV-GELMFLTSLDVATRMLWGASLRGEDWDAVAIQFREVLEEM  228 (524)
Q Consensus       150 ~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~-~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~  228 (524)
                      +. +.|++..++.+.+.+.+.++++++.+.+  ++.+|+ .++...+++++++. +||.+..+      ...+......+
T Consensus       128 ~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~--~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~------~~~~~~~~~~~  197 (441)
T 3nc3_A          128 VV-RSFIGDALDHLSPLIKQNAENLLAPYLE--RGKSDLVNDFGKTFAVCVTMD-MLGLDKRD------HEKISEWHSGV  197 (441)
T ss_dssp             HH-HHHHHTHHHHHHHHHHHHHHHHHTTTTT--TTEEECCCCCHHHHHHHHHHH-HTTCCGGG------HHHHHHHHHHH
T ss_pred             HH-hhcCHHHHHHHHHHHHHHHHHHHHHHHh--cCCCcHHHHHHHHHHHHHHHH-HcCCCHHH------HHHHHHHHHHH
Confidence            96 8999999999999999999999998865  567896 55666799999999 58976532      13444555544


Q ss_pred             HHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcccHHHHHHHHhhcCCCCCcHHH
Q 009821          229 FQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSSKDFLQTLLELQQQGDYSLSMDQ  308 (524)
Q Consensus       229 ~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~l~~~~  308 (524)
                      .........    +       ....+...+..+.+.+++.+.+++++++       ...|+++.|++... ++..+++++
T Consensus       198 ~~~~~~~~~----~-------~~~~~~~~~~~~~l~~~~~~~i~~rr~~-------~~~Dll~~Ll~~~~-~~~~ls~~e  258 (441)
T 3nc3_A          198 ADFITSISQ----S-------PEARAHSLWCSEQLSQYLMPVIKERRVN-------PGSDLISILCTSEY-EGMALSDKD  258 (441)
T ss_dssp             HHHHHCSCC----C-------HHHHHHHHHHHHHHHHHHHHHHHHHTTS-------CCSSHHHHHCC-------CCCHHH
T ss_pred             HHhcccccC----C-------hHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHHhhc-cCCCCCHHH
Confidence            443321110    0       1123456677788889999999887653       23689999998765 335699999


Q ss_pred             HHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcccccccCCChhHHHHHHhhhcCCCCCCCc
Q 009821          309 IKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLPYLEAIVKETLRLHPPAPLL  388 (524)
Q Consensus       309 i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~  388 (524)
                      +.+++. .+++||+|||+++++|++++|++||++|+|+++|+                  +|+++||+|+||++|+++. 
T Consensus       259 l~~~~~-~ll~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~LRl~pp~~~-  318 (441)
T 3nc3_A          259 ILALIL-NVLLAATEPADKTLALMIYHLLNNPEQMNDVLADR------------------SLVPRAIAETLRYKPPVQL-  318 (441)
T ss_dssp             HHHHHH-HHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHCG------------------GGHHHHHHHHHHHSCSBCE-
T ss_pred             HHHHHH-HHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCH------------------HHHHHHHHHhhhcCCcccC-
Confidence            999999 99999999999999999999999999999999986                  5999999999999999998 


Q ss_pred             CccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCcccCCccceeecCCCCCCCCCHHHHH
Q 009821          389 TSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGDFRGNNFNYLPFGSGRRICPGIPLAE  468 (524)
Q Consensus       389 ~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~  468 (524)
                      ++|.+.+|++++|+.||+|+.|.++.+++||||++|+||++||||||+.....  ....+..++|||+|+|.|+|++||+
T Consensus       319 ~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dP~~F~PeR~~~~~~~--~~~~~~~~l~FG~G~r~C~G~~lA~  396 (441)
T 3nc3_A          319 IPRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQPDVFNIHREDLGIKS--AFSGAARHLAFGSGIHNCVGTAFAK  396 (441)
T ss_dssp             EEEEESSCEESSSCEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTCTTSCGGG--TTSSSCSSCTTCCGGGCCTTHHHHH
T ss_pred             ccEEECCCEEECCEEECCCCEEEechHHhcCChhhCCCcccCCCCCCCccccc--ccCCCCCcccCCCCCccCCCHHHHH
Confidence            78999999999999999999999999999999999999999999999754321  1122467999999999999999999


Q ss_pred             HHHHHHHHHHhhhc-eeeCCCCCCCCcccccccccccCCCceeeeec
Q 009821          469 KIVPHVLANLLHLF-EWSLPEGTKFDLSDKLLMALKKSEPLVVIPTP  514 (524)
Q Consensus       469 ~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  514 (524)
                      +|++++++.|+++| +++++++ +..+.  ...+......++|+++|
T Consensus       397 ~e~~~~l~~ll~~f~~~~l~~~-~~~~~--~~~~~~~~~~lpv~~~~  440 (441)
T 3nc3_A          397 NEIEIVANIVLDKMRNIRLEED-FCYAE--SGLYTRGPVSLLVAFDG  440 (441)
T ss_dssp             HHHHHHHHHHHHHSTTCEECTT-CCCCE--ECSSBCEESCCEEECC-
T ss_pred             HHHHHHHHHHHHhCcccEECCC-Ccccc--cCccccCcceeEEEEec
Confidence            99999999999999 9999866 22222  23444455667777654


No 56 
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=100.00  E-value=7.5e-59  Score=453.25  Aligned_cols=378  Identities=15%  Similarity=0.164  Sum_probs=300.2

Q ss_pred             CCChhHHHHHHHHHhC-CeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCcccchhhhccCCcc--cccCCchHHHH
Q 009821           71 EPNLHRYFTKLSQIYG-PIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAAASVLTYGGKS--IGASPEWPKLR  147 (524)
Q Consensus        71 ~~~~~~~~~~~~~kyG-~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~w~~~R  147 (524)
                      ..+++.++.++++++| ||+++..++ +.++|+||+.++++++++ ..|+++............+.+  ..+|+.|+++|
T Consensus        37 ~~dp~~~~~~lr~~~G~pv~~~~~~~-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~dg~~h~~~R  114 (421)
T 3lxh_A           37 EQGFHEAWKRVQQPDTPPLVWTPFTG-GHWIATRGTLIDEIYRSP-ERFSSRVIWVPREAGEAYDMVPTKLDPPEHTPYR  114 (421)
T ss_dssp             GGCHHHHHHHHCCTTCCSEEEESSTT-SEEEECSHHHHHHHHTCT-TTEETTCCSSSHHHHHHCCCTTTTCCTTTHHHHH
T ss_pred             hcChhHHHHHHHhcCCCCeEeccCCC-CeEEEcCHHHHHHHHcCh-hhccCCcccCCcccccccccCCccCCcHHHHHHH
Confidence            4588999999987765 899998876 488999999999999655 357666532222211112222  23899999999


Q ss_pred             HHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehhH-HHHHHHHHHHHHHHhccCCCCCCchHHHHHHHHHHH
Q 009821          148 QVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVGE-LMFLTSLDVATRMLWGASLRGEDWDAVAIQFREVLE  226 (524)
Q Consensus       148 ~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~-~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~  226 (524)
                      +.+. +.|+...++.+.+.+.+.++++++.+..  ++.+|+.. +...++.++++. +||.+...      ...+.....
T Consensus       115 ~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~--~~~~d~~~~~~~~~~~~v~~~-~~G~~~~~------~~~~~~~~~  184 (421)
T 3lxh_A          115 KAID-KGLNLAEIRKLEDQIRTIAVEIIEGFAD--RGHCEFGSEFSTVFPVRVFLA-LAGLPVED------ATKLGLLAN  184 (421)
T ss_dssp             HHHH-HHHSHHHHHTTHHHHHHHHHHHHHTTTT--TSEEEHHHHTTTTHHHHHHHH-HHTCCGGG------HHHHHHHHH
T ss_pred             HHHh-hhcCHHHHHHHHHHHHHHHHHHHHHHhh--cCCeehHHHHHHHHHHHHHHH-HcCCCHHH------HHHHHHHHH
Confidence            9997 8999999999999999999999998865  45788654 456688888876 47875432      234444444


Q ss_pred             HHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcccHHHHHHHHhhcCCCCCcH
Q 009821          227 EMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSSKDFLQTLLELQQQGDYSLSM  306 (524)
Q Consensus       227 ~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~l~~  306 (524)
                      .++...      ..+|.       ...++..+..+.+.+++.+.+++++++       ...|+++.|++... ++..+++
T Consensus       185 ~~~~~~------~~~p~-------~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~dll~~ll~~~~-~~~~l~~  243 (421)
T 3lxh_A          185 EMTRPS------GNTPE-------EQGRSLEAANKGFFEYVAPIIAARRGG-------SGTDLITRILNVEI-DGKPMPD  243 (421)
T ss_dssp             HHHSCC------CSSHH-------HHHHHHHHHHHHHHHHHHHHHHHHTTC-------CCCSHHHHHHTSCB-TTBCCCH
T ss_pred             HHhccc------cCCCc-------hhHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHhhhc-cCCCCCH
Confidence            433211      11221       124566778888999999999887654       34699999998754 3456999


Q ss_pred             HHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcccccccCCChhHHHHHHhhhcCCCCCC
Q 009821          307 DQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLPYLEAIVKETLRLHPPAP  386 (524)
Q Consensus       307 ~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~  386 (524)
                      +++.++++ .+++||+|||+++++|++++|++||++|+|+|+|++                  |+++||+|+||++|++ 
T Consensus       244 ~ei~~~~~-~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~-  303 (421)
T 3lxh_A          244 DRALGLVS-LLLLGGLDTVVNFLGFMMIYLSRHPETVAEMRREPL------------------KLQRGVEELFRRFAVV-  303 (421)
T ss_dssp             HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHCHH------------------HHHHHHHHHHHHCCCB-
T ss_pred             HHHHHHHH-HHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------HHHHHHHHHHHhcCcc-
Confidence            99999999 999999999999999999999999999999999986                  7899999999999999 


Q ss_pred             CcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCcccCCccceeecCCCCCCCCCHHH
Q 009821          387 LLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGDFRGNNFNYLPFGSGRRICPGIPL  466 (524)
Q Consensus       387 ~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~  466 (524)
                      . ++|.+.+|++++||.||||+.|.++.+++||||++|+||++||||||-            ..++|||+|+|.|+|++|
T Consensus       304 ~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~~dP~~F~PeR~~------------~~~l~FG~G~r~C~G~~l  370 (421)
T 3lxh_A          304 S-DARYVVSDMEFHGTMLKEGDLILLPTALHGLDDRHHDDPMTVDLSRRD------------VTHSTFAQGPHRCAGMHL  370 (421)
T ss_dssp             E-EEEEECSCEEETTEEECTTCEEEEETHHHHTCTTTSSSTTSCCTTCSC------------CCCCTTCCGGGSCTTHHH
T ss_pred             C-CceeeCCCeeECCEEECCCCEEEEchhhhCCChhhCCCcCeeCCCCCC------------CCCCCCCCcCccCcCHHH
Confidence            5 789999999999999999999999999999999999999999999952            369999999999999999


Q ss_pred             HHHHHHHHHHHHhhhc-eeeCCCCCCCCcccccccccccCCCceeeeecCCC
Q 009821          467 AEKIVPHVLANLLHLF-EWSLPEGTKFDLSDKLLMALKKSEPLVVIPTPRSL  517 (524)
Q Consensus       467 A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~~  517 (524)
                      |.+|++++++.|+++| +++++++.+..+..  .. ......++|+++||+.
T Consensus       371 A~~e~~~~l~~ll~~fp~~~l~~~~~~~~~~--~~-~~~~~~lpv~~~p~~~  419 (421)
T 3lxh_A          371 ARLEVTVMLQEWLARIPEFRLKDRAVPIYHS--GI-VAAVENIPLEWEPQRV  419 (421)
T ss_dssp             HHHHHHHHHHHHHHHCCCCEECTTCCCEEEC--SS-BCEEECCEEECCCC--
T ss_pred             HHHHHHHHHHHHHHhCCCcEECCCCCceecc--cc-ccCceeeeEEEecccc
Confidence            9999999999999999 99998775444332  22 2333568999999864


No 57 
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=100.00  E-value=1.3e-58  Score=449.46  Aligned_cols=351  Identities=17%  Similarity=0.195  Sum_probs=286.0

Q ss_pred             CCCChhHHHHHHHHHhCCeEEEec-CCeeEEEeCCHHHHHHHHHhccccccCCCcccch------hhh-----ccCC-cc
Q 009821           70 AEPNLHRYFTKLSQIYGPIFKFYL-GRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAAA------SVL-----TYGG-KS  136 (524)
Q Consensus        70 ~~~~~~~~~~~~~~kyG~i~~~~~-g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~------~~~-----~~~~-~~  136 (524)
                      +..+++.++.+++ +||||+++++ |+.++++++||+.+++++.++  .|++++.....      ...     ...+ ..
T Consensus        20 ~~~~p~~~~~~l~-~~Gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   96 (413)
T 2z36_A           20 CPFAPPAAYERLR-ERAPINKVRLTSGGQAWWVSGHEEARAVLADG--RFSSDKRKDGFPLFTLDAATLQQLRSQPPLML   96 (413)
T ss_dssp             BTTBCCHHHHHHH-HHCSEEEEEETTSCEEEEECSHHHHHHHHHCT--TEECCTTSTTCCCSSCCHHHHHHHTTSCCCGG
T ss_pred             cccCchHHHHHHH-HcCCeeEeecCCCceEEEEecHHHHHHHHcCC--CcccCccccCcccccccccccccccccccccc
Confidence            4568899999997 8899999997 888999999999999999874  36665422111      111     1222 22


Q ss_pred             cccCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehhHHH-HHHHHHHHHHHHhccCCCCCCch
Q 009821          137 IGASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVGELM-FLTSLDVATRMLWGASLRGEDWD  215 (524)
Q Consensus       137 ~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~-~~~~~dvi~~~~fG~~~~~~~~~  215 (524)
                      ..+|+.|+++|+.+. +.|+...++.+.+.+.+.++++++.+.+..++++|+...+ ..+++++++.+ ||.++.+.   
T Consensus        97 ~~~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~---  171 (413)
T 2z36_A           97 GMDGAEHSAARRPVI-GEFTVKRLAALRPRIQDIVDHFIDDMLATDQRPVDLVQALSLPVPSLVICEL-LGVPYTDH---  171 (413)
T ss_dssp             GCCHHHHHHHHHHHH-GGGSHHHHHHHHHHHHHHHHHHHHHHTTCSCSSEEHHHHTTTHHHHHHHHHH-HTCCGGGH---
T ss_pred             ccCchHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHhhhhHHHHHHHH-hCCCHHHH---
Confidence            338899999999997 8899999999999999999999999975336789988655 57999999995 89865421   


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcccHHHHHHH
Q 009821          216 AVAIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSSKDFLQTLLE  295 (524)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~  295 (524)
                         ..+......+    ...    ..|           ++..+..+.+.+++.+.+++++++.       ..|+++.|++
T Consensus       172 ---~~~~~~~~~~----~~~----~~~-----------~~~~~~~~~~~~~~~~~i~~r~~~~-------~~dll~~ll~  222 (413)
T 2z36_A          172 ---DFFQSRTTMM----VSR----TSM-----------EDRRRAFAELRAYIDDLITRKESEP-------GDDLFSRQIA  222 (413)
T ss_dssp             ---HHHHHHHHHT----TCS----SCH-----------HHHHHHHHHHHHHHHHHHHHHHSSC-------CSSHHHHHHH
T ss_pred             ---HHHHHHHHHH----hcc----cCc-----------HHHHHHHHHHHHHHHHHHHHHHhCC-------CCCHHHHHHH
Confidence               2333222211    100    000           4455677788888888888876532       3589999998


Q ss_pred             HhhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcccccccCCChhHHHHH
Q 009821          296 LQQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLPYLEAIV  375 (524)
Q Consensus       296 ~~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i  375 (524)
                      ...+ +..++++++.+++. .+++||+|||+++++|++++|++||++|+|+|+|++                  |++|||
T Consensus       223 ~~~~-~~~ls~~ei~~~~~-~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i  282 (413)
T 2z36_A          223 RQRQ-EGTLDHAGLVSLAF-LLLTAGHETTANMISLGVVGLLSHPEQLTVVKANPG------------------RTPMAV  282 (413)
T ss_dssp             HHHH-HSCCCHHHHHHHHH-HHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCGG------------------GHHHHH
T ss_pred             hhcC-CCCCCHHHHHHHHH-HHHhcchHHHHHHHHHHHHHHHhCHHHHHHHHhChH------------------HHHHHH
Confidence            7532 34689999999999 999999999999999999999999999999999963                  799999


Q ss_pred             HhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCcccCCccceeecC
Q 009821          376 KETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGDFRGNNFNYLPFG  455 (524)
Q Consensus       376 ~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~~~~~~~~~pFg  455 (524)
                      +|+||++|+++..++|.+.+|++++||.||||+.|.++.+++||||++|+||++||||||.            ..++|||
T Consensus       283 ~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~------------~~~l~FG  350 (413)
T 2z36_A          283 EELLRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVLDVERGA------------RHHLAFG  350 (413)
T ss_dssp             HHHHHHHCTTTTCEEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCC------------CCCCTTC
T ss_pred             HHHHHhCCCcccceeeeeCCCEEECCEEECCCCEEEEChHhhcCChhhCCCccccCCCCCC------------CCCCCCC
Confidence            9999999999955899999999999999999999999999999999999999999999984            2489999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHhhhc-eeeCCCC
Q 009821          456 SGRRICPGIPLAEKIVPHVLANLLHLF-EWSLPEG  489 (524)
Q Consensus       456 ~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~  489 (524)
                      +|+|.|||++||++|++++++.|+++| ++++.++
T Consensus       351 ~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~  385 (413)
T 2z36_A          351 FGPHQCLGQNLARMELQIVFDTLFRRIPSLRLAVP  385 (413)
T ss_dssp             CSTTSCTTHHHHHHHHHHHHHHHHHHSTTCEESSC
T ss_pred             CCCccCccHHHHHHHHHHHHHHHHHhCCCccccCC
Confidence            999999999999999999999999999 5898765


No 58 
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=100.00  E-value=2.8e-58  Score=448.63  Aligned_cols=352  Identities=17%  Similarity=0.199  Sum_probs=291.0

Q ss_pred             cCCCChhHHHHHHHHHhCCeEEEecC-CeeEEEeCCHHHHHHHHHhccccccCCCccc---chhh-h-----ccCCcccc
Q 009821           69 SAEPNLHRYFTKLSQIYGPIFKFYLG-RKLCIVIGSPSLAKQVLKEHDVVFANRDPSA---AASV-L-----TYGGKSIG  138 (524)
Q Consensus        69 ~~~~~~~~~~~~~~~kyG~i~~~~~g-~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~---~~~~-~-----~~~~~~~~  138 (524)
                      .+..+++.++.+++++ ||||+++++ +.++++|+||+.+++++.++  .|++++...   .... .     ...+....
T Consensus        26 ~~~~dp~~~~~~l~~~-Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  102 (417)
T 3tyw_A           26 GCPFAAPAEYAALRTD-DPVARVTLPTRREAWVVTRYDDVRELLSDP--RVSADIRRPGFPALGEGEQEAGARFRPFIRT  102 (417)
T ss_dssp             SSTTSCCTHHHHHHHT-CTEEEEECTTSCEEEEECCHHHHHHHHHCT--TEECCSSSTTCCCSSTTTSTTSSSCCCGGGC
T ss_pred             ccccCchHHHHHHHhh-CCeeeeecCCCCCeEEEcCHHHHHHHHcCC--CcccCCccccccccccccccccccccchhhc
Confidence            3467899999999888 999999986 58999999999999999887  365543211   1111 0     11122223


Q ss_pred             cCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehhHHH-HHHHHHHHHHHHhccCCCCCCchHH
Q 009821          139 ASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVGELM-FLTSLDVATRMLWGASLRGEDWDAV  217 (524)
Q Consensus       139 ~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~-~~~~~dvi~~~~fG~~~~~~~~~~~  217 (524)
                      +|+.|+++|+.+. +.|+...++.+.+.+.+.++++++.+.. .++++|+...+ ..+++++++.+ ||.++.+.+    
T Consensus       103 dg~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~-~g~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~~----  175 (417)
T 3tyw_A          103 DAPEHTRYRRMLL-PAFTVRRVRAMRPAVQARVDEILDGMLA-AGGPVDLVSAYANAVSTSVICEL-LGIPRHDLE----  175 (417)
T ss_dssp             CHHHHHHHHHHHG-GGGCHHHHHHTHHHHHHHHHHHHHHHHH-HCSSEEHHHHTHHHHHHHHHHHH-HTCCTTTTT----
T ss_pred             CCcHHHHHHHHHH-hhhCHHHHHHHHHHHHHHHHHHHHHHHh-hCCCcchHHHHHHHHHHHHHHHH-hCCCHHHHH----
Confidence            8899999999997 8999999999999999999999999876 56789999877 68999999997 898876432    


Q ss_pred             HHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcccHHHHHHHHh
Q 009821          218 AIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSSKDFLQTLLELQ  297 (524)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~  297 (524)
                        .+......+...         .+         ..+...+..+.+.+++.+.+++++++       ...|+++.+++..
T Consensus       176 --~~~~~~~~~~~~---------~~---------~~~~~~~~~~~l~~~~~~~i~~r~~~-------~~~d~l~~ll~~~  228 (417)
T 3tyw_A          176 --FFRDVTRISGSR---------NS---------TAEQVSEALGGLFGLLGGLVAERREE-------PRDDLISKLVTDH  228 (417)
T ss_dssp             --HHHHHHHHHHSS---------SS---------CTTHHHHHHHHHHHHHHHHHHHHHSS-------CCSSHHHHHHHHT
T ss_pred             --HHHHHHHHHhcc---------cC---------CHHHHHHHHHHHHHHHHHHHHHHhhC-------CCCCHHHHHHHhc
Confidence              233333222210         00         11345667778888888888887653       2369999999876


Q ss_pred             hcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcccccccCCChhHHHHHHh
Q 009821          298 QQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLPYLEAIVKE  377 (524)
Q Consensus       298 ~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E  377 (524)
                      .++ ..++++++.+++. .+++||+|||+++++|++++|++||++|+|+|+|++                  |++|||+|
T Consensus       229 ~~~-~~ls~~el~~~~~-~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E  288 (417)
T 3tyw_A          229 LVP-GNVTTEQLLSTLG-ITINAGRETTTSMIALSTLLLLDRPELPAELRKDPD------------------LMPAAVDE  288 (417)
T ss_dssp             TTT-TSSCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCTHHHHHHHHCGG------------------GHHHHHHH
T ss_pred             ccC-CCCCHHHHHHHHH-HHHhhhHHHHHHHHHHHHHHHHcCHHHHHHHHhChH------------------HHHHHHHH
Confidence            543 3689999999998 999999999999999999999999999999999964                  79999999


Q ss_pred             hhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCcccCCccceeecCCC
Q 009821          378 TLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGDFRGNNFNYLPFGSG  457 (524)
Q Consensus       378 ~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~~~~~~~~~pFg~G  457 (524)
                      +||++|+++..++|.+.+|++++||.||||+.|.++.+++||||++|+||++||||||.            ..++|||+|
T Consensus       289 ~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~------------~~~l~FG~G  356 (417)
T 3tyw_A          289 LLRVLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGANHDPEQFDDPERVDFHRTD------------NHHVAFGYG  356 (417)
T ss_dssp             HHHHHCSCTTCCEEEESSCEECSSCEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSC------------CCCCTTCCS
T ss_pred             HHHhccccccCceeEeCCCeEECCEEECCCCEEEEehhhhcCChhhcCCccccCCCCCC------------CCCCCCCCC
Confidence            99999999986789999999999999999999999999999999999999999999993            258999999


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHhhhc-eeeCCCC
Q 009821          458 RRICPGIPLAEKIVPHVLANLLHLF-EWSLPEG  489 (524)
Q Consensus       458 ~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~  489 (524)
                      +|.|||++||.+|++++++.|+++| +++++.+
T Consensus       357 ~r~C~G~~lA~~e~~~~l~~ll~~fp~~~l~~~  389 (417)
T 3tyw_A          357 VHQCVGQHLARLELEVALETLLRRVPTLRLAGE  389 (417)
T ss_dssp             TTCCSCHHHHHHHHHHHHHHHHHHCTTCEECSC
T ss_pred             CccCcCHHHHHHHHHHHHHHHHHhCCcccccCC
Confidence            9999999999999999999999999 9998744


No 59 
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=100.00  E-value=4.7e-59  Score=451.71  Aligned_cols=354  Identities=15%  Similarity=0.192  Sum_probs=286.6

Q ss_pred             CCCChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCcccchhhhccCCcc--cccCCchHHHH
Q 009821           70 AEPNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAAASVLTYGGKS--IGASPEWPKLR  147 (524)
Q Consensus        70 ~~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~w~~~R  147 (524)
                      +..+++.++.+++++ |||+++..++ +.++|+||+.+++++++++ .|++++...........+..  ..+|+.|+++|
T Consensus        22 ~~~~p~~~~~~l~~~-Gpv~~~~~~~-~~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~~~~~~~~~~~g~~h~~~R   98 (396)
T 3oft_A           22 VEQDYFAAWKTLLDG-PGLVWSTANG-GHWIAARGDVVRELWGDAE-RLSSQCLAVTPGLGKVMQFIPLQQDGAEHKAFR   98 (396)
T ss_dssp             TTTCHHHHHHGGGGS-CSEEEECSTT-SEEEECSHHHHHHHHHCTT-TEESTTCCSSTTHHHHHCCTTTTCCHHHHHHHH
T ss_pred             hhcChHHHHHHHHhc-CCeeeecCCC-CEEEEcCHHHHHHHHcCcc-cccCCcccCCCccccccccCccccCCcHHHHHH
Confidence            356899999999988 9999998875 4889999999999997764 57666532222111111222  23889999999


Q ss_pred             HHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehhHHH-HHHHHHHHHHHHhccCCCCCCchHHHHHHHHHHH
Q 009821          148 QVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVGELM-FLTSLDVATRMLWGASLRGEDWDAVAIQFREVLE  226 (524)
Q Consensus       148 ~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~-~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~  226 (524)
                      +.+. +.|+...++.+.+.+.+.++++++.+.+  ++.+|+...+ ..++.++++. +||.+...      ...+.....
T Consensus        99 ~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~--~~~~d~~~~~~~~~~~~v~~~-~~G~~~~~------~~~~~~~~~  168 (396)
T 3oft_A           99 TPVM-KGLASRFVVALEPKVQAVARKLMESLRP--RGSCDFVSDFAEILPLNIFLT-LIDVPLED------RPRLRQLGV  168 (396)
T ss_dssp             HHHH-HHTCHHHHHHHHHHHHHHHHHHHHHHGG--GSEEEHHHHTTTTHHHHHHHH-HTTCCGGG------HHHHHHHHH
T ss_pred             HHhh-hhhCHHHHHHHHHHHHHHHHHHHHHhhh--cCCccHHHHHHHHHHHHHHHH-HcCCCHHH------HHHHHHHHH
Confidence            9997 8999999999999999999999999976  4568876554 6677777776 67865421      133444333


Q ss_pred             HHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcccHHHHHHHHhhcCCCCCcH
Q 009821          227 EMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSSKDFLQTLLELQQQGDYSLSM  306 (524)
Q Consensus       227 ~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~l~~  306 (524)
                      .++..   .         .       .+...+..+.+.+++.+.+++++++       ...|+++.|++... ++..+++
T Consensus       169 ~~~~~---~---------~-------~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~d~l~~ll~~~~-~~~~l~~  221 (396)
T 3oft_A          169 QLTRP---D---------G-------SMTVEQLKQAADDYLWPFIEKRMAQ-------PGDDLFSRILSEPV-GGRPWTV  221 (396)
T ss_dssp             HHHSC---C---------S-------SCCHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHTSCB-TTBCCCH
T ss_pred             HHhCC---C---------C-------HHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHHhhc-cCCCCCH
Confidence            33210   0         0       1234556677788888888877654       24699999998754 3456999


Q ss_pred             HHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcccccccCCChhHHHHHHhhhcCCCCCC
Q 009821          307 DQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLPYLEAIVKETLRLHPPAP  386 (524)
Q Consensus       307 ~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~  386 (524)
                      +++.+++. .+++||+|||+++++|++++|++||++|+|+|+|++                  |++|||+|+||++|++ 
T Consensus       222 ~el~~~~~-~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~-  281 (396)
T 3oft_A          222 DEARRMCR-NLLFGGLDTVAAMIGMVALHLARHPEDQRLLRERPD------------------LIPAAADELMRRYPTV-  281 (396)
T ss_dssp             HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GHHHHHHHHHHHCCCB-
T ss_pred             HHHHHHHH-HHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------hHHHHHHHHHHhcCcc-
Confidence            99999999 999999999999999999999999999999999985                  7899999999999999 


Q ss_pred             CcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCcccCCccceeecCCCCCCCCCHHH
Q 009821          387 LLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGDFRGNNFNYLPFGSGRRICPGIPL  466 (524)
Q Consensus       387 ~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~  466 (524)
                      . ++|.+.+|++++||.||||+.|.++.+++||||++|+||++||||||+.          +..++|||+|+|.|+|++|
T Consensus       282 ~-~~R~~~~d~~~~g~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~PeR~~~----------~~~~~~FG~G~r~C~G~~l  350 (396)
T 3oft_A          282 A-VSRNAVADVDADGVTIRKGDLVYLPSVLHNLDPASFEAPEEVRFDRGLA----------PIRHTTMGVGAHRCVGAGL  350 (396)
T ss_dssp             E-EEEEESSCEEETTEEECTTCEEEEETHHHHTCTTTSSSTTSCCSCCCCC----------GGGSSTTCCGGGCCTTHHH
T ss_pred             c-CceecCCCEEECCEEECCCCEEEeChHHhCCCcccCCCcCccCCCCCCC----------CCCcccCCCCCccCcCHHH
Confidence            5 7899999999999999999999999999999999999999999999973          2479999999999999999


Q ss_pred             HHHHHHHHHHHHhhhc-eeeCCCCCCCCc
Q 009821          467 AEKIVPHVLANLLHLF-EWSLPEGTKFDL  494 (524)
Q Consensus       467 A~~e~~~~l~~ll~~f-~~~~~~~~~~~~  494 (524)
                      |.+|++++++.|+++| +++++++.+..+
T Consensus       351 A~~e~~~~l~~ll~~~~~~~l~~~~~~~~  379 (396)
T 3oft_A          351 ARMEVIVFLREWLGGMPEFALAPDKAVTM  379 (396)
T ss_dssp             HHHHHHHHHHHHHHHSCCEEECSSSCCEE
T ss_pred             HHHHHHHHHHHHHHhCCCceECCCCCcee
Confidence            9999999999999999 999987754443


No 60 
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=100.00  E-value=2.7e-59  Score=465.72  Aligned_cols=406  Identities=14%  Similarity=0.181  Sum_probs=291.3

Q ss_pred             CCCCCCCCCCCCceecccccC-----CC-ChhHHHHHHHHHhCC-eEEEecCC-------eeEEEeCCHHHHHHHHHh--
Q 009821           50 STPPLPPGPRALPLVGNILSA-----EP-NLHRYFTKLSQIYGP-IFKFYLGR-------KLCIVIGSPSLAKQVLKE--  113 (524)
Q Consensus        50 ~~~~~ppgp~~~p~iG~~~~~-----~~-~~~~~~~~~~~kyG~-i~~~~~g~-------~~~vvv~dp~~i~~il~~--  113 (524)
                      .+.+.||||.++|++|+++++     .. +++.++.++++|||+ ||++++++       ...+++.|+...+.++..  
T Consensus         6 ~Pl~~iPGp~g~P~iG~~~~~~~~~~~~g~~~~~~~~~~~kyG~~vf~~~~~~~~~v~~~~~~v~~~~~~~~~~~~~~~~   85 (473)
T 3dan_A            6 KPLREIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRANMPPGPFVSSNPKVIVLLDAKSFPILFDVSK   85 (473)
T ss_dssp             SCBCCCCCCCCSTTHHHHHHHHHHHHSTTHHHHHHHHHHHHHTCSEEEEECTTCTTTCSCCEEEEECSTTTGGGGGCTTT
T ss_pred             CCCCCCCCCCCCcchhhHHHHHHHHHhhcCchHHHHhHHHHhCCeEEEecCCCCCccccCCceEEeecccccceecCCcc
Confidence            466789999999999998764     45 789999999999999 99999863       345555666555444431  


Q ss_pred             --ccccccCCCcccchhhhcc-CCcccc--cCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhcc--CCCce
Q 009821          114 --HDVVFANRDPSAAASVLTY-GGKSIG--ASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGR--VGSPI  186 (524)
Q Consensus       114 --~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~--~~~~v  186 (524)
                        +...+........ ...+. ....+.  +++.|+++|+.+. +.|+. .++.+.+.+.+.++++++.+...  +++++
T Consensus        86 ~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~h~~~R~~~~-~~f~~-~~~~~~~~i~~~~~~ll~~~~~~~~~~~~v  162 (473)
T 3dan_A           86 VEKKDLFTGTYMPST-KLTGGYRVLSYLDPSEPRHAQLKNLLF-FMLKN-SSNRVIPQFETTYTELFEGLEAELAKNGKA  162 (473)
T ss_dssp             EECSSCTTSSSCCCG-GGGTTSCCGGGCCTTSHHHHHHHHHHH-HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHSCE
T ss_pred             eeccccccccccCCc-cccCCCcceeeeCCCcHHHHHHHHHHH-HHHHH-HHHHHHHHHHHHHHHHHHHHHHHhccCCcc
Confidence              1111211111111 12221 112222  7899999999997 78887 48899999999999999998653  35689


Q ss_pred             ehhHHHHHHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHH
Q 009821          187 KVGELMFLTSLDVATRMLWGASLRGEDWDAVAIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKI  266 (524)
Q Consensus       187 d~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~  266 (524)
                      |+.+++..++++++++++||.++...+..   ..+..........       ..+|.+.... +              .+
T Consensus       163 dl~~~~~~~~~~~i~~~~~G~~~~~~~~~---~~~~~~~~~~~~~-------~~~p~~~~~l-p--------------~~  217 (473)
T 3dan_A          163 AFNDVGEQAAFRFLGRAYFNSNPEETKLG---TSAPTLISSWVLF-------NLAPTLDLGL-P--------------WF  217 (473)
T ss_dssp             ECHHHHHHHHHHHHHHHHHSCCGGGSTTT---TCHHHHHHHHHHH-------HHGGGCCCSC-C--------------HH
T ss_pred             cHHHHHHHHHHHHHHHHHcCCCCCchhhh---hhHHHHHHHHHHH-------hccchhhhcc-h--------------HH
Confidence            99999999999999999999988763321   2222222222111       0112211000 0              01


Q ss_pred             HHHhhccccCCCCCC---C----CCCcccHHHHHHHHhhcCCCCCcHHHHHHHHHhhhh-cccccchHHHHHHHHHHHhh
Q 009821          267 FESLLRPGQSGQDMN---E----GKSSKDFLQTLLELQQQGDYSLSMDQIKALFMVDVA-IGSTDTTSITVEWAMSELLQ  338 (524)
Q Consensus       267 ~~~~i~~~~~~~~~~---~----~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~l~~~-~ag~~tts~~l~~~l~~L~~  338 (524)
                      +...+.++++.....   .    .+.-.|+++.+++..++  ..++++++.++++ .++ ++|++||+++++|++++|++
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~--~~l~~~ei~~~~l-~~~g~~~~~tta~~l~~~l~~L~~  294 (473)
T 3dan_A          218 LQEPLLHTFRLPAFLIKSTYNKLYDYFQSVATPVMEQAEK--LGVPKDEAVHNIL-FAVCFNTFGGVKILFPNTLKWIGL  294 (473)
T ss_dssp             HHHHHHSSSCCCGGGTHHHHHHHHHHHHHHCHHHHHHHHH--HTCCHHHHHHHHH-HHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhhhccchHhhhhhchhhhHHHHHHHHHHHHHhHhh--cCCCHHHHHHHHH-HHHHHhccccHHHHHHHHHHHHHh
Confidence            111111111100000   0    00012455556665443  4689999998886 455 88999999999999999999


Q ss_pred             -CcHHHHHHHHHHHHhhcC-C-CcccccccCCChhHHHHHHhhhcCCCCCCCcCccccCCCccc----cceeeCCCCEEE
Q 009821          339 -KPEVMRKARNELEQVVAR-D-SVVEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNL----SGYTIPKGSTIF  411 (524)
Q Consensus       339 -~pe~~~klr~Ei~~~~~~-~-~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~----~g~~ip~G~~v~  411 (524)
                       ||++|+|||+|++++++. + +.++.+++.+||||+|||+|+||++|+++.. .|.+.+|+++    +||.||||+.|.
T Consensus       295 ~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~-~r~~~~d~~l~~~~~g~~Ip~G~~v~  373 (473)
T 3dan_A          295 AGENLHTQLAEEIRGAIKSYGDGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQ-YGKAKSNFTIESHDATFEVKKGEMLF  373 (473)
T ss_dssp             HCHHHHHHHHHHHHHHHHHHSTTSCCHHHHHTCHHHHHHHHHHHHHSCSSCEE-EEEESSCEEEECSSCEEEECTTCEEE
T ss_pred             cCHHHHHHHHHHHHHHhhcccCCCCCHHHHhcCchHHHHHHHHHhcCCCcccc-cccccCCcEeecCCCceEeCCCCEEE
Confidence             899999999999999764 3 6789999999999999999999999999985 4669999999    999999999999


Q ss_pred             eehhhhccCCCCCCCCCCCCCCccccccCCCcccCCccceeecCCCC---------CCCCCHHHHHHHHHHHHHHHhhhc
Q 009821          412 INAWAIQRNPEVWENPQDFQPDRFLEDVKIGDFRGNNFNYLPFGSGR---------RICPGIPLAEKIVPHVLANLLHLF  482 (524)
Q Consensus       412 ~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~~~~~~~~~pFg~G~---------r~C~G~~~A~~e~~~~l~~ll~~f  482 (524)
                      ++.+++||||++|+||++||||||++...      ....++|||+|+         |.|||++||.+|++++++.|+++|
T Consensus       374 ~~~~~~~~dp~~~~dp~~F~p~R~~~~~~------~~~~~~~fg~G~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f  447 (473)
T 3dan_A          374 GYQPFATKDPKVFDRPEEYVPDRFVGDGE------ALLKYVWWSNGPETESPTVENKQCAGKDFVVLITRLFVIELFRRY  447 (473)
T ss_dssp             EEHHHHTTCTTTSSSTTSCCTTTTSGGGG------GGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHE
T ss_pred             echHHhhCCchhcCCcccCCccccCCCcc------cccccceecCCcCcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhC
Confidence            99999999999999999999999997521      123455555555         999999999999999999999999


Q ss_pred             eeeCCCCCCCC
Q 009821          483 EWSLPEGTKFD  493 (524)
Q Consensus       483 ~~~~~~~~~~~  493 (524)
                      ++...++.+.+
T Consensus       448 ~~~~~~~~~~~  458 (473)
T 3dan_A          448 DSFEIELGESP  458 (473)
T ss_dssp             EEEEEEEECCS
T ss_pred             CeEEccCCccc
Confidence            97655543333


No 61 
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=100.00  E-value=4.6e-58  Score=443.43  Aligned_cols=364  Identities=17%  Similarity=0.211  Sum_probs=290.0

Q ss_pred             CCCChhHHHHHHHHHhCCeEEEec-CCeeEEEeCCHHHHHHHHHhccccccCCCcccc-hhhhccCCcc--cc--cC---
Q 009821           70 AEPNLHRYFTKLSQIYGPIFKFYL-GRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAA-ASVLTYGGKS--IG--AS---  140 (524)
Q Consensus        70 ~~~~~~~~~~~~~~kyG~i~~~~~-g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~-~~~~~~~~~~--~~--~~---  140 (524)
                      +..+++.++.++ ++||||+++++ ++.+.++|+||+.+++++.++.  |.+++.... ...... +.+  +.  +|   
T Consensus        24 ~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~-~~~~~l~~~~g~~~   99 (404)
T 2xbk_A           24 KMLKLSPLLRAL-QDRGPIHRVRTPAGDEAWLVTRHAELKQLLHDER--IGRTHPDPPSAAQYVR-SPFLDLLISDADAE   99 (404)
T ss_dssp             BTTBCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHTTCTT--EESBCSSGGGSCCSSC-CHHHHTTCBCSCHH
T ss_pred             cccCccHHHHHH-HhhCCEeeeccCCCceEEEEcCHHHHHHHHcCCC--CCCCccccccCCcccc-cccccceeeCCCCC
Confidence            346789999999 89999999997 7899999999999999998753  555543221 111111 222  33  88   


Q ss_pred             ---CchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehhHHH-HHHHHHHHHHHHhccCCCCCCchH
Q 009821          141 ---PEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVGELM-FLTSLDVATRMLWGASLRGEDWDA  216 (524)
Q Consensus       141 ---~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~-~~~~~dvi~~~~fG~~~~~~~~~~  216 (524)
                         +.|+++|+.+. +.|+...++.+.+.+.+.++++++.+.. .|+++|+...+ ..+++++++. +||.++.+     
T Consensus       100 ~~~~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~-~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~-----  171 (404)
T 2xbk_A          100 SGRRQHAETRRLLT-PLFSARRVLEMQPKVEEAADTLLDAFIA-QGPPGDLHGELTVPFALTVLCE-VIGVPPQR-----  171 (404)
T ss_dssp             HHHHHHHHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHHHHH-TCSSEEHHHHTHHHHHHHHHHH-HHTCCGGG-----
T ss_pred             CCCchHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCeeHHHHHHHHHHHHHHHH-HhCCCHHH-----
Confidence               89999999997 8899999999999999999999999875 45689998655 5799999997 78987532     


Q ss_pred             HHHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcccHHHHHHHH
Q 009821          217 VAIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSSKDFLQTLLEL  296 (524)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~  296 (524)
                       ...+......++.   ..     .|       +    +..+..+.+.+++.+.+++++++.       ..|+++.+ + 
T Consensus       172 -~~~~~~~~~~~~~---~~-----~~-------p----~~~~~~~~~~~~~~~~i~~r~~~~-------~~dll~~l-~-  222 (404)
T 2xbk_A          172 -RAELTTLLAGIAK---LD-----DR-------E----GAVRAQDDLFGYVAGLVEHKRAEP-------GPDIISRL-N-  222 (404)
T ss_dssp             -HHHHHHHHHHHTB---SS-----CH-------H----HHHHHHHHHHHHHHHHHHHHHHSC-------CSSHHHHH-H-
T ss_pred             -HHHHHHHHHHHHh---cc-----Cc-------H----HHHHHHHHHHHHHHHHHHHHHhCC-------CCCHHHHh-h-
Confidence             1234333332211   00     00       0    345566778888888888776532       25899888 2 


Q ss_pred             hhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcccccccCCChhHHHHHH
Q 009821          297 QQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLPYLEAIVK  376 (524)
Q Consensus       297 ~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~  376 (524)
                         ++ .++++++.+++. .+++||+|||+++++|++++|++||++|+|+++|++                  |++|||+
T Consensus       223 ---~~-~ls~~ei~~~~~-~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~  279 (404)
T 2xbk_A          223 ---DG-ELTEDRVAHLAM-GLLFAGLDSVASIMDNGVVLLAAHPDQRAAALADPD------------------VMARAVE  279 (404)
T ss_dssp             ---SS-SCCHHHHHHHHH-HHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHCHH------------------HHHHHHH
T ss_pred             ---cC-CCCHHHHHHHHH-HHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------HHHHHHH
Confidence               23 689999999998 999999999999999999999999999999999974                  7999999


Q ss_pred             hhhcCCCCCC-CcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCcccCCccceeecC
Q 009821          377 ETLRLHPPAP-LLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGDFRGNNFNYLPFG  455 (524)
Q Consensus       377 E~lRl~p~~~-~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~~~~~~~~~pFg  455 (524)
                      |+||++|+++ ..++|.+.+|++++||.||||+.|.++.+++||||++|+||++||||||.            ..++|||
T Consensus       280 E~lRl~p~~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~------------~~~lpFG  347 (404)
T 2xbk_A          280 EVLRTARAGGSVLPPRYASEDMEFGGVTIRAGDLVLFDLGLPNFDERAFTGPEEFDAARTP------------NPHLTFG  347 (404)
T ss_dssp             HHHHHSCSSCCBCSCEEESSCEEETTEEECTTCEEECBTHHHHTCTTTSSSTTSCCTTCSS------------CCCCTTE
T ss_pred             HHHHhCCCccccccceeECCCeeECCEEECCCCEEEeChHHhcCChhhCCCccccCCCCCC------------CCCCCCC
Confidence            9999999999 45799999999999999999999999999999999999999999999983            2589999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHhhhc-eeeCCCC-CCCCcccccccccccCCCceee
Q 009821          456 SGRRICPGIPLAEKIVPHVLANLLHLF-EWSLPEG-TKFDLSDKLLMALKKSEPLVVI  511 (524)
Q Consensus       456 ~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~  511 (524)
                      +|+|.|+|++||.+|++++++.|+++| ++++.++ .++.+..  ..+......++|+
T Consensus       348 ~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~--~~~~~~~~~lpv~  403 (404)
T 2xbk_A          348 HGIWHCIGAPLARLELRTMFTKLFTRLPELRPELPVEQLRLKE--GQLSGGFAELRVV  403 (404)
T ss_dssp             ETTEECTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCS--SBTTCCBSCCEEE
T ss_pred             CCCcCCCcHHHHHHHHHHHHHHHHHhCCcceecCCCCcceecc--CcccCCcceeeee
Confidence            999999999999999999999999999 7998764 2233322  3333444555554


No 62 
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=100.00  E-value=5.1e-58  Score=447.98  Aligned_cols=355  Identities=15%  Similarity=0.178  Sum_probs=290.5

Q ss_pred             CChhHHHHHHHHHhCCeEEEecC-------CeeEEEeCCHHHHHHHHHhccccccCCCcc--c-chhhhc--cCCccccc
Q 009821           72 PNLHRYFTKLSQIYGPIFKFYLG-------RKLCIVIGSPSLAKQVLKEHDVVFANRDPS--A-AASVLT--YGGKSIGA  139 (524)
Q Consensus        72 ~~~~~~~~~~~~kyG~i~~~~~g-------~~~~vvv~dp~~i~~il~~~~~~~~~~~~~--~-~~~~~~--~~~~~~~~  139 (524)
                      .+++.++.+++ +|||||+++++       +.++++|+||+.+++++.+++ .|++++..  . ....+.  ..+....+
T Consensus        44 ~~p~~~~~~l~-~~Gpv~~~~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~~~~~~~~~l~~~d  121 (435)
T 2wm5_A           44 DVRDGAFATLR-REAPISFWPTIELPGFVAGNGHWALTKYDDVFYASRHPD-IFSSYPNITINDQTPELAEYFGSMIVLD  121 (435)
T ss_dssp             HHHHHHHHHHH-HHCSEEEECCCCC---CCCCCEEEECSHHHHHHHHHCTT-TEECSSCCSSSCCCHHHHHHHHGGGGCC
T ss_pred             CChhHHHHHHH-hcCCeEecccccccccCCCCCeEEEcCHHHHHHHHcCcc-cccCccccccCccccchhhhccccccCC
Confidence            46788899995 79999999986       668999999999999999864 57776521  1 111111  11222338


Q ss_pred             CCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhcc-CCCceehhHHH-HHHHHHHHHHHHhccCCCCCCchHH
Q 009821          140 SPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGR-VGSPIKVGELM-FLTSLDVATRMLWGASLRGEDWDAV  217 (524)
Q Consensus       140 ~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~-~~~~vd~~~~~-~~~~~dvi~~~~fG~~~~~~~~~~~  217 (524)
                      |+.|+++|+.+. +.|+...++.+.+.+.+.++++++.+.+. ++.++|+.+.+ ..+++++++++ ||.++++.     
T Consensus       122 g~~h~~~R~~l~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~~-----  194 (435)
T 2wm5_A          122 DPRHQRLRSIVS-RAFTPKVVARIEAAVRDRAHRLVSSMIANNPDRQADLVSELAGPLPLQIICDM-MGIPKADH-----  194 (435)
T ss_dssp             TTHHHHHHHHHH-HTCCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEHHHHTTTHHHHHHHHHH-HTCCGGGH-----
T ss_pred             cHHHHHHHHHhH-HhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcEehHHHHHHHHHHHHHHHH-cCCCHHHH-----
Confidence            999999999997 89999999999999999999999998764 24589998765 78999999999 99976421     


Q ss_pred             HHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcccHHHHHHHHh
Q 009821          218 AIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSSKDFLQTLLELQ  297 (524)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~  297 (524)
                       ..+......++...        .|.+.     ...++..+..+.+.+++.+.+++++++       ...|+++.|++..
T Consensus       195 -~~~~~~~~~~~~~~--------~p~~~-----~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~dll~~ll~~~  253 (435)
T 2wm5_A          195 -QRIFHWTNVILGFG--------DPDLA-----TDFDEFMQVSADIGAYATALAEDRRVN-------HHDDLTSSLVEAE  253 (435)
T ss_dssp             -HHHHHHHHHHHHTT--------CTTSC-----CCHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHHCC
T ss_pred             -HHHHHHHHHHhccC--------Ccchh-----hhHHHHHHHHHHHHHHHHHHHHHHhcC-------CCCCHHHHHHhhh
Confidence             34444444444321        12211     112456677788888899888887653       2368999999875


Q ss_pred             hcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcccccccCCChhHHHHHHh
Q 009821          298 QQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLPYLEAIVKE  377 (524)
Q Consensus       298 ~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E  377 (524)
                      .+ +..++++++.+++. .+++||+|||+++++|++++|++||++|+|+|+|++                 +|++|||+|
T Consensus       254 ~~-~~~ls~~ei~~~~~-~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~-----------------~~l~a~i~E  314 (435)
T 2wm5_A          254 VD-GERLSSREIASFFI-LLVVAGNETTRNAITHGVLALSRYPEQRDRWWSDFD-----------------GLAPTAVEE  314 (435)
T ss_dssp             BT-TBCCCHHHHHHHHH-HHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHSHH-----------------HHHHHHHHH
T ss_pred             cc-CCCCCHHHHHHHHH-HHHHHhhHHHHHHHHHHHHHHHhCCHHHHHHHhChH-----------------hHHHHHHHH
Confidence            42 44689999999998 999999999999999999999999999999999986                 389999999


Q ss_pred             hhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCcccCCccceeecCC-
Q 009821          378 TLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGDFRGNNFNYLPFGS-  456 (524)
Q Consensus       378 ~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~~~~~~~~~pFg~-  456 (524)
                      +||++|+++. ++|.+.+|++++||.||||+.|.++.+++||||++|+||++||||||-            ..++|||+ 
T Consensus       315 ~lRl~p~~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dP~~F~PeR~~------------~~~lpFG~~  381 (435)
T 2wm5_A          315 IVRWASPVVY-MRRTLTQDIELRGTKMAAGDKVSLWYCSANRDESKFADPWTFDLARNP------------NPHLGFGGG  381 (435)
T ss_dssp             HHHHHCSBCC-EEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTCCCTTCCS------------CCCCTTCSS
T ss_pred             HHhhcCcccC-cceEeCCCeeECCEEECCCCEEEeCHHHhcCCcccCcCCCccCCCCCC------------CCCCCCCCC
Confidence            9999999994 799999999999999999999999999999999999999999999931            25899999 


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHhhhce-eeCCC
Q 009821          457 GRRICPGIPLAEKIVPHVLANLLHLFE-WSLPE  488 (524)
Q Consensus       457 G~r~C~G~~~A~~e~~~~l~~ll~~f~-~~~~~  488 (524)
                      |+|.|||++||.+|++++++.|+++|+ +++.+
T Consensus       382 G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~  414 (435)
T 2wm5_A          382 GAHFCLGANLARREIRVAFDELRRQMPDVVATE  414 (435)
T ss_dssp             STTCCTTHHHHHHHHHHHHHHHHHHCTTCEECS
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHhCCccEECC
Confidence            999999999999999999999999997 99875


No 63 
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=100.00  E-value=3.8e-58  Score=445.64  Aligned_cols=370  Identities=18%  Similarity=0.214  Sum_probs=291.4

Q ss_pred             CCChhHHHHHHHHHhCCeEEEecCC--eeEEEeCCHHHHHHHHHhccccccCCCcccchhhh---ccC-Cccc--ccCCc
Q 009821           71 EPNLHRYFTKLSQIYGPIFKFYLGR--KLCIVIGSPSLAKQVLKEHDVVFANRDPSAAASVL---TYG-GKSI--GASPE  142 (524)
Q Consensus        71 ~~~~~~~~~~~~~kyG~i~~~~~g~--~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~~~~---~~~-~~~~--~~~~~  142 (524)
                      ..+++..+.++++ ||||+++...|  .+.++|++|+.+++++++++ .|++++........   ... +.++  .+|+.
T Consensus        36 ~~dp~~~~~~lr~-~gpV~~~~~~g~~~~~~vv~~~~~v~~vl~~~~-~fs~~~~~~~~~~~~~~~~~~~~~l~~~dg~~  113 (415)
T 3mgx_A           36 TLERHARWRELAA-EDAMVWSDPGSSPSGFWSVFSHRACAAVLAPSA-PLTSEYGMMIGFDRDHPDNSGGRMMVVSEHEQ  113 (415)
T ss_dssp             STTHHHHHHHHHH-HTCCEEECSSSSSSCEEEECSHHHHHHHSCTTS-SEECTTCSSTTCCSSSCCTTTTTSGGGCCHHH
T ss_pred             cCChhHHHHHHHh-cCCEeeccCCCCcCCEEEEecHHHHHHHHhChh-hhcCCccccccccccccccccCCCccccCcHH
Confidence            4588999999976 99999986334  78999999999999997654 46665433221110   001 2222  38899


Q ss_pred             hHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehhHHH-HHHHHHHHHHHHhccCCCCCCchHHHHHH
Q 009821          143 WPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVGELM-FLTSLDVATRMLWGASLRGEDWDAVAIQF  221 (524)
Q Consensus       143 w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~-~~~~~dvi~~~~fG~~~~~~~~~~~~~~~  221 (524)
                      |+++|+.+. +.|+...++.+.+.+.+.++++++.+.+  ++++|+...+ ..+++++|+. +||.+..+      ...+
T Consensus       114 h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~--~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~------~~~~  183 (415)
T 3mgx_A          114 HRKLRKLVG-PLLSRAAARKLAERVRIEVGDVLGRVLD--GEVCDAATAIGPRIPAAVVCE-ILGVPAED------EDML  183 (415)
T ss_dssp             HHHHHHHHG-GGSSHHHHHHSHHHHHHHHHHHTTTSSS--SSCEESTTTTTTHHHHHHHHH-HHTCCGGG------HHHH
T ss_pred             HHHHHHHhH-hhhCHHHHHHHHHHHHHHHHHHHHHHHh--cCCcchHHHHHHHHHHHHHHH-HcCCCHHH------HHHH
Confidence            999999986 8999999999999999999999988865  3479998777 6799999998 57865321      1344


Q ss_pred             HHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcccHHHHHHHHhhcCC
Q 009821          222 REVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSSKDFLQTLLELQQQGD  301 (524)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~  301 (524)
                      .+....+..    .......|       .    ...+..+.+.+++.+.+++++++.       ..|+++.|++..    
T Consensus       184 ~~~~~~~~~----~~~~~~~~-------~----~~~~~~~~l~~~~~~~i~~rr~~~-------~~dll~~ll~~~----  237 (415)
T 3mgx_A          184 IDLTNHAFG----GEDELFDG-------M----TPRQAHTEILVYFDELITARRKEP-------GDDLVSTLVTDD----  237 (415)
T ss_dssp             HHHHHHHTS----CCC----C-------C----CHHHHHHHHHHHHHHHHHHHHHSC-------CSSHHHHHHHCT----
T ss_pred             HHHHHHHHc----ccCcccch-------H----HHHHHHHHHHHHHHHHHHHHHhCC-------CCCHHHHHHhCC----
Confidence            444333321    11111111       0    112556777888888888776542       368999999754    


Q ss_pred             CCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcccccccCCChhHHHHHHhhhcC
Q 009821          302 YSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLPYLEAIVKETLRL  381 (524)
Q Consensus       302 ~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl  381 (524)
                       .++++++.+++. .+++||+|||+++++|++++|++||++|+|+++|+                  ||++|||+|+||+
T Consensus       238 -~ls~~el~~~~~-~ll~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~LRl  297 (415)
T 3mgx_A          238 -DLTIDDVLLNCD-NVLIGGNETTRHAITGAVHALATVPGLLTALRDGS------------------ADVDTVVEEVLRW  297 (415)
T ss_dssp             -TSCHHHHHHHHH-HHHHHHHTTHHHHHHHHHHHHHHSTTHHHHHHHTS------------------SCHHHHHHHHHHH
T ss_pred             -CCCHHHHHHHHH-HHHHhhhHHHHHHHHHHHHHHHHCHHHHHHHHhCh------------------HhHHHHHHHHHHh
Confidence             589999999999 99999999999999999999999999999999996                  6999999999999


Q ss_pred             CCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCcccCCccceeecCCCCCCC
Q 009821          382 HPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGDFRGNNFNYLPFGSGRRIC  461 (524)
Q Consensus       382 ~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~~~~~~~~~pFg~G~r~C  461 (524)
                      +|+++. ++|.+.+|++++||.||||+.|.++.+++||||++|+||++||||||.            ..++|||+|+|.|
T Consensus       298 ~pp~~~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~~~dP~~F~P~R~~------------~~~l~FG~G~r~C  364 (415)
T 3mgx_A          298 TSPAMH-VLRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLPGRKP------------NRHITFGHGMHHC  364 (415)
T ss_dssp             HCCBCE-EEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTCCS------------CCCCTTCCGGGCC
T ss_pred             cCcccc-cceecCCCeeECCEEECCCCEEEechHHhCCChhhcCCccccCCCCCC------------CCCCCCCCCCccC
Confidence            999996 789999999999999999999999999999999999999999999973            2589999999999


Q ss_pred             CCHHHHHHHHHHHHHHHhhhc-eeeCCCCCCCCcccccccccccCCCceeeeecC
Q 009821          462 PGIPLAEKIVPHVLANLLHLF-EWSLPEGTKFDLSDKLLMALKKSEPLVVIPTPR  515 (524)
Q Consensus       462 ~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  515 (524)
                      +|++||.+|++++++.|+++| +++++.+.  ...  ..........++|++++|
T Consensus       365 ~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~--~~~--~~~~~~~~~~lpv~~~~R  415 (415)
T 3mgx_A          365 LGSALARIELSVVLRVLAERVSRVDLEREP--AWL--RAIVVQGYRELPVRFTGR  415 (415)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHEEEEEECSCC--EEC--SCSSBCCEEECEEEEEEC
T ss_pred             cCHHHHHHHHHHHHHHHHHhCCCCccCCCc--ccc--cCCcccCceeeeEEEecC
Confidence            999999999999999999999 89987432  111  122333445678888876


No 64 
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=100.00  E-value=9.2e-58  Score=445.95  Aligned_cols=380  Identities=21%  Similarity=0.282  Sum_probs=297.8

Q ss_pred             CCCChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCcccchhh-h---------ccCCccccc
Q 009821           70 AEPNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAAASV-L---------TYGGKSIGA  139 (524)
Q Consensus        70 ~~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~~~-~---------~~~~~~~~~  139 (524)
                      +..+++.++.++ ++||||+++++|   .++|+||+.++++++++. .+++++....... .         ...+....+
T Consensus        27 ~~~~p~~~~~~l-r~~gpv~~~~~g---~~vv~~~~~v~~vl~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d  101 (418)
T 3r9b_A           27 TRADPYPIYDRI-RRGGPLALPEAN---LAVFSSFSDCDDVLRHPS-SCSDRTKSTIFQRQLAAETQPRPQGPASFLFLD  101 (418)
T ss_dssp             GTTCCHHHHHHH-HHHCCEEEGGGT---EEEECSHHHHHHHHHCTT-EECCGGGCHHHHHHHC---------CCCGGGCC
T ss_pred             hccCchHHHHHH-HhcCCEEECCCC---eEEEecHHHHHHHHcCcc-cccCcccccccccccccccccccccccchhhcC
Confidence            367899999998 688999998776   899999999999998754 3444432221111 1         111222338


Q ss_pred             CCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehh-HHHHHHHHHHHHHHHhccCCCCCCchHHH
Q 009821          140 SPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVG-ELMFLTSLDVATRMLWGASLRGEDWDAVA  218 (524)
Q Consensus       140 ~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~-~~~~~~~~dvi~~~~fG~~~~~~~~~~~~  218 (524)
                      |+.|+++|+.+. +.|+...++.+.+.+.+.++++++ +.+  ++++|+. ++...++++++++ +||.+....      
T Consensus       102 g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~-l~~--~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~------  170 (418)
T 3r9b_A          102 PPDHTRLRGLVS-KAFAPRVIKRLEPEITALVDQLLD-AVD--GPEFNLIDNLAYPLPVAVICR-LLGVPIEDE------  170 (418)
T ss_dssp             TTHHHHHHHHHH-GGGSHHHHGGGHHHHHHHHHHHHH-TCC--SSEEEHHHHTTTHHHHHHHHH-HHTCCGGGH------
T ss_pred             CchHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHh-hhc--cCCeehHHHHhCcCCHHHHHH-HcCCCHHHH------
Confidence            999999999997 899999999999999999999999 754  4589975 4556899999999 899876421      


Q ss_pred             HHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcccHHHHHHHHhh
Q 009821          219 IQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSSKDFLQTLLELQQ  298 (524)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~  298 (524)
                      ..+......+.....      .++.+.++. ....++..+..+.+.+++.+.+++++++       ...|+++.+++...
T Consensus       171 ~~~~~~~~~~~~~~~------~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~i~~r~~~-------~~~d~l~~ll~~~~  236 (418)
T 3r9b_A          171 PKFSRASALLAAALD------PFLALTGET-SDLFDEQMKAGMWLRDYLRALIDERRRT-------PGEDLMSGLVAVEE  236 (418)
T ss_dssp             HHHHHHHHHHHHTTS------CHHHHHSSC-CTTHHHHHHHHHHHHHHHHHHHHHTTTS-------CCSSHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhcC------ccccccccC-HHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CCccHHHHHHHhhh
Confidence            234433333332211      111111111 1234567788888999999999887654       24699999998754


Q ss_pred             cCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcccccccCCChhHHHHHHhh
Q 009821          299 QGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLPYLEAIVKET  378 (524)
Q Consensus       299 ~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~  378 (524)
                      + +..++++++.+++. .+++||+|||+++++|++++|++||++|+|+++|++                  |++|||+|+
T Consensus       237 ~-~~~ls~~ei~~~~~-~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~  296 (418)
T 3r9b_A          237 S-GDQLTEDEIIATCN-LLLIAGHETTVNLIANAALAMLRTPGQWAALAADGS------------------RASAVIEET  296 (418)
T ss_dssp             H-SSSCCHHHHHHHHH-HHHHHHHHTHHHHHHHHHHHHHHSTTHHHHHHHCGG------------------GHHHHHHHH
T ss_pred             c-cCCCCHHHHHHHHH-HHHHHhHHHHHHHHHHHHHHHHcCHHHHHHHHhChH------------------hHHHHHHHH
Confidence            3 34699999999999 999999999999999999999999999999999975                  789999999


Q ss_pred             hcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCcccCCccceeecCCCC
Q 009821          379 LRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGDFRGNNFNYLPFGSGR  458 (524)
Q Consensus       379 lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~~~~~~~~~pFg~G~  458 (524)
                      ||++|+++. ..|.+.+|++++||.||||+.|.++.+++||||++|+||++|||||+            +..++|||+|+
T Consensus       297 lRl~p~~~~-~~R~~~~d~~l~g~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~p~R~------------~~~~~~FG~G~  363 (418)
T 3r9b_A          297 MRYDPPVQL-VSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPDRA------------QIRHLGFGKGA  363 (418)
T ss_dssp             HHHSCSBCC-EEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCS------------CCCCCTTCCGG
T ss_pred             HHhCCcccc-ceeEeCCCeEECCEEECCCCEEEEChHHhcCCcccCCCcCcCCCCCC------------CCCCcCCCCcC
Confidence            999999998 57999999999999999999999999999999999999999999992            13589999999


Q ss_pred             CCCCCHHHHHHHHHHHHHHHhhhc-eeeCCCCCCCCcccccccccccCCCceeeeecCC
Q 009821          459 RICPGIPLAEKIVPHVLANLLHLF-EWSLPEGTKFDLSDKLLMALKKSEPLVVIPTPRS  516 (524)
Q Consensus       459 r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  516 (524)
                      |.|+|++||.+|++++++.|+++| +++++++  ..+  ....+......++|++++|+
T Consensus       364 r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~--~~~--~~~~~~~~~~~lpv~~~~r~  418 (418)
T 3r9b_A          364 HFCLGAPLARLEATVALPALAARFPEARLSGE--PEY--KRNLTLRGMSTLSIAVHHHH  418 (418)
T ss_dssp             GCCTTHHHHHHHHHHHHHHHHHHCTTCEECSC--CEE--CSCSSBCCEEECEEEC----
T ss_pred             ccCccHHHHHHHHHHHHHHHHHhCccceeCCC--Ccc--ccCCcccCcceeEEEecCCC
Confidence            999999999999999999999999 8998754  222  23455566677889988874


No 65 
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=100.00  E-value=5.3e-58  Score=443.20  Aligned_cols=370  Identities=16%  Similarity=0.185  Sum_probs=288.2

Q ss_pred             CCCChhHHHHHHHHHhCCeEEEec-CCeeEEEeCCHHHHHHHHHhcccccc-C-CCcc--cchh---hhccCCcccccCC
Q 009821           70 AEPNLHRYFTKLSQIYGPIFKFYL-GRKLCIVIGSPSLAKQVLKEHDVVFA-N-RDPS--AAAS---VLTYGGKSIGASP  141 (524)
Q Consensus        70 ~~~~~~~~~~~~~~kyG~i~~~~~-g~~~~vvv~dp~~i~~il~~~~~~~~-~-~~~~--~~~~---~~~~~~~~~~~~~  141 (524)
                      +..+++..+.++ ++|||||++++ ++.+.++++||+.+++++.++.  |. + ++..  ....   .....+.++... 
T Consensus        14 ~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-   89 (396)
T 1n40_A           14 RGDRIPDAVAEL-RTREPIRKVRTITGAEAWLVSSYALCTQVLEDRR--FSMKETAAAGAPRLNALTVPPEVVNNMGNI-   89 (396)
T ss_dssp             CSSSCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHHTCTT--EESGGGGSTTCCCSSCCSSCGGGGGHHHHH-
T ss_pred             cccCccHHHHHH-HHhCCeeEeecCCCceEEEEecHHHHHHHHhCCC--cccccCccccccccccccCCchhhhhhhhH-
Confidence            456889999999 99999999997 7889999999999999998763  54 3 3221  1110   001012233323 


Q ss_pred             chHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehhHHH-HHHHHHHHHHHHhccCCCCCCchHHHHH
Q 009821          142 EWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVGELM-FLTSLDVATRMLWGASLRGEDWDAVAIQ  220 (524)
Q Consensus       142 ~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~-~~~~~dvi~~~~fG~~~~~~~~~~~~~~  220 (524)
                      .|+++|+.+. +.|+.. ++.+.+.+.+.++++++.+.. .++++|+...+ ..+++++++. +||.++++      ...
T Consensus        90 ~h~~~R~~~~-~~fs~~-~~~~~~~i~~~~~~l~~~l~~-~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~------~~~  159 (396)
T 1n40_A           90 ADAGLRKAVM-KAITPK-APGLEQFLRDTANSLLDNLIT-EGAPADLRNDFADPLATALHCK-VLGIPQED------GPK  159 (396)
T ss_dssp             HHTTCHHHHH-HHTSSC-STTHHHHHHHHHHHHHHHHHH-HCSCEETTTTTHHHHHHHHHHH-HHTCCGGG------HHH
T ss_pred             HHHHHHHHHH-HhhChH-HHHhHHHHHHHHHHHHHHHHh-cCCCccHHHHHHHHhHHHHHHH-HhCCChhh------HHH
Confidence            8999999997 789999 999999999999999999875 26689998655 5899999998 89987642      123


Q ss_pred             HHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcccHHHHHHHHh-hc
Q 009821          221 FREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSSKDFLQTLLELQ-QQ  299 (524)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~-~~  299 (524)
                      +......++..   ..   ..|          .++..+..+.+ +++.+.++    +     .....|+++.|++.. .+
T Consensus       160 ~~~~~~~~~~~---~~---~~p----------~~~~~~~~~~~-~~~~~~i~----~-----~~~~~dll~~ll~~~~~~  213 (396)
T 1n40_A          160 LFRSLSIAFMS---SA---DPI----------PAAKINWDRDI-EYMAGILE----N-----PNITTGLMGELSRLRKDP  213 (396)
T ss_dssp             HHHTHHHHTBC---CS---SCC----------HHHHHHHHHHH-HHHHHHHH----C-----TTCCSHHHHHHHHHHTSG
T ss_pred             HHHHHHHHhcc---cc---CCC----------HHHHHHHHHHH-HHHHHHHh----C-----CCCCCCHHHHHHHhhccc
Confidence            44433333211   00   011          13445566666 77777776    1     112468999999875 21


Q ss_pred             CCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcccccccCCChhHHHHHHhhh
Q 009821          300 GDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLPYLEAIVKETL  379 (524)
Q Consensus       300 ~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~l  379 (524)
                      ++..++++++.+++. .+++||+|||+++++|++++|++||++|+|+|+|++                  |++|||+|+|
T Consensus       214 ~~~~l~~~~i~~~~~-~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~l  274 (396)
T 1n40_A          214 AYSHVSDELFATIGV-TFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKPE------------------LIPAGVEELL  274 (396)
T ss_dssp             GGTTSCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG------------------GHHHHHHHHH
T ss_pred             ccCCCCHHHHHHHHH-HHHHHhhhhHHHHHHHHHHHHHcChHHHHHHHhCHH------------------HHHHHHHHHH
Confidence            235689999999999 999999999999999999999999999999999963                  7999999999


Q ss_pred             cCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCcccCCccceeecCCCCC
Q 009821          380 RLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGDFRGNNFNYLPFGSGRR  459 (524)
Q Consensus       380 Rl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~~~~~~~~~pFg~G~r  459 (524)
                      |++|+++..++|.+.+|++++||.||||+.|.++.+++||||++|+||++||||||..           ..++|||+|+|
T Consensus       275 Rl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~-----------~~~~~FG~G~r  343 (396)
T 1n40_A          275 RINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRPNP-----------TSHLAFGRGQH  343 (396)
T ss_dssp             HTCCCBCSCEEEEESSCEEETTEEECTTCEEEECHHHHHTCTTTSSSTTSCCTTCSST-----------TCSSTTCCGGG
T ss_pred             hhCCCcccccceecCCCeeECCEEECCCCEEEechHHhhCChhhCCChhhCCCCCCCC-----------CCCCCCCCCCc
Confidence            9999999558999999999999999999999999999999999999999999999962           25899999999


Q ss_pred             CCCCHHHHHHHHHHHHHHHhhhc-eeeCCCC-CCCCcccccccccccCCCceee
Q 009821          460 ICPGIPLAEKIVPHVLANLLHLF-EWSLPEG-TKFDLSDKLLMALKKSEPLVVI  511 (524)
Q Consensus       460 ~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~  511 (524)
                      .|+|++||++|++++++.|+++| ++++.++ .++.+..  ..+......++|+
T Consensus       344 ~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~--~~~~~~~~~lpv~  395 (396)
T 1n40_A          344 FCPGSALGRRHAQIGIEALLKKMPGVDLAVPIDQLVWRT--RFQRRIPERLPVL  395 (396)
T ss_dssp             CCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCC--SBSBCCBSCCEEE
T ss_pred             CCCCHHHHHHHHHHHHHHHHHhCccccccCCcccccccc--ccccCCcceeeee
Confidence            99999999999999999999999 5998764 2233322  3334444556654


No 66 
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=100.00  E-value=1.6e-57  Score=439.15  Aligned_cols=344  Identities=16%  Similarity=0.201  Sum_probs=285.0

Q ss_pred             CCChhHHHHHHHHHhCCeEEEecCC----eeEEEeCCHHHHHHHHHhccccccCCCcccchhhhccCCcc--cccCCchH
Q 009821           71 EPNLHRYFTKLSQIYGPIFKFYLGR----KLCIVIGSPSLAKQVLKEHDVVFANRDPSAAASVLTYGGKS--IGASPEWP  144 (524)
Q Consensus        71 ~~~~~~~~~~~~~kyG~i~~~~~g~----~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~w~  144 (524)
                      ..+++.++.++ ++||||+++++++    .++++|+||+.++++++++ ..|++++...........+..  ..+|+.|+
T Consensus        11 ~~~p~~~~~~l-r~yGpv~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~   88 (384)
T 3oo3_A           11 RLDPVPEFEEL-QKAGPLHEYDTEPGMDGRKQWLVTGHDEVRAILADH-ERFSSMRPVDDEADRALLPGILQAYDPPDHT   88 (384)
T ss_dssp             TTEECHHHHHH-HHTCSEECCCCC------CEEEECCHHHHHHHHHCT-TTEECSCCCC-----CCCTTCGGGCCTTHHH
T ss_pred             ccChhHHHHHH-HhcCCeeecccccccCCCCEEEEcCHHHHHHHHhCc-hhccCCccccccccccccccccccCCChhHH
Confidence            56889999999 5999999999886    8999999999999999655 457777654322211111222  22899999


Q ss_pred             HHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHHHHHHhccCCCCCCchHHHHHHHHH
Q 009821          145 KLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVGELMFLTSLDVATRMLWGASLRGEDWDAVAIQFREV  224 (524)
Q Consensus       145 ~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~  224 (524)
                      ++|+.+. +.|+...++.+.+.+.+.++++++.+.+ .++++|+.+.+...+.+.+...+||.+.++.      ..+...
T Consensus        89 ~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~-~~~~~d~~~~~~~~~~~~v~~~~~G~~~~~~------~~~~~~  160 (384)
T 3oo3_A           89 RLRRTVA-PAYSARRMERLRPRIEEIVEECLDDFES-VGAPVDFVRHAAWPIPAYIACEFLGVPRDDQ------AELSRM  160 (384)
T ss_dssp             HHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHHHHH-SCSSEEHHHHTTTHHHHHHHHHHHTCCGGGH------HHHHHH
T ss_pred             HHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCccHHHHHHHHHHHHHHHHHcCCCHHHH------HHHHHH
Confidence            9999997 8999999999999999999999999965 5678999999988887777778899875421      344444


Q ss_pred             HHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcccHHHHHHHHhhcCCCCC
Q 009821          225 LEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSSKDFLQTLLELQQQGDYSL  304 (524)
Q Consensus       225 ~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~l  304 (524)
                      +..++.          .         ...+...+..+.+.+++.+.+++++++       ...|+++.+++..   +..+
T Consensus       161 ~~~~~~----------~---------~~~~~~~~~~~~~~~~~~~~i~~~~~~-------~~~d~l~~ll~~~---~~~l  211 (384)
T 3oo3_A          161 IRESRE----------S---------RLPRQRTLSGLGIVNYTKRLTSGKRRD-------PGDGMIGVIVREH---GAEI  211 (384)
T ss_dssp             HHHHHH----------C---------SCHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHHHHHHHH---GGGS
T ss_pred             HHHHhc----------c---------CChHHHHHHHHHHHHHHHHHHHHHHhC-------CCCCHHHHHHHhc---CCCC
Confidence            444432          0         112455667778888888888877643       2369999999873   2468


Q ss_pred             cHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcccccccCCChhHHHHHHhhhcCCCC
Q 009821          305 SMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLPYLEAIVKETLRLHPP  384 (524)
Q Consensus       305 ~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~  384 (524)
                      +++++.+++. .+++||+|||+++++|++++|++||++|+|+|+|++.                  ++|||+|+||++|+
T Consensus       212 ~~~~l~~~~~-~~~~AG~~Tta~~l~~~l~~L~~~P~~~~~l~~E~~~------------------l~a~i~E~lRl~p~  272 (384)
T 3oo3_A          212 SDEELAGLAE-GNLIMAAEQMAAQLAVAVLLLVTHPDQMALLREKPEL------------------IDSATEEVLRHASI  272 (384)
T ss_dssp             CHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHCGGG------------------HHHHHHHHHHHHCS
T ss_pred             CHHHHHHHHH-HHHHhhHHHHHHHHHHHHHHHHHCHHHHHHHHhCHHH------------------HHHHHHHHHHhCCc
Confidence            9999999999 9999999999999999999999999999999999875                  78999999999999


Q ss_pred             CCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCcccCCccceeecCCCCCCCCCH
Q 009821          385 APLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGDFRGNNFNYLPFGSGRRICPGI  464 (524)
Q Consensus       385 ~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~  464 (524)
                      ++..++|.+.+|++++||.||||+.|.++.+++||     +||++||||||.            ..|+|||+|+|.|||+
T Consensus       273 ~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~r-----~dp~~F~PeR~~------------~~~~~FG~G~r~C~G~  335 (384)
T 3oo3_A          273 VEAPAPRVALADVRMAGRDIHAGDVLTCSMLATNR-----APGDRFDITREK------------ATHMAFGHGIHHCIGA  335 (384)
T ss_dssp             CSCCSCEEESSCEEETTEEECTTCEEEECHHHHHC-----CTTCCCCTTCSC------------CCCCTTCCSTTSCTTH
T ss_pred             ccCCcceeeCCCEEECCEEECCCCEEEEehhhcCC-----CCcceeCCCCCC------------CCcCCCCCCCcCCCCH
Confidence            98768999999999999999999999999999999     899999999952            3599999999999999


Q ss_pred             HHHHHHHHHHHHHHhhhc-eeeCCCC
Q 009821          465 PLAEKIVPHVLANLLHLF-EWSLPEG  489 (524)
Q Consensus       465 ~~A~~e~~~~l~~ll~~f-~~~~~~~  489 (524)
                      +||.+|++++++.|+++| +++++++
T Consensus       336 ~lA~~e~~~~l~~ll~~f~~~~l~~~  361 (384)
T 3oo3_A          336 PLARLQLRVALPAVVGRFPSLRLAVP  361 (384)
T ss_dssp             HHHHHHHHHHHHHHHHHCTTCEESSC
T ss_pred             HHHHHHHHHHHHHHHHhCCCCeeCCC
Confidence            999999999999999999 9998765


No 67 
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=100.00  E-value=1.4e-57  Score=447.18  Aligned_cols=360  Identities=19%  Similarity=0.249  Sum_probs=286.0

Q ss_pred             hhHHHHHHHHHhCCeE--EEe-cCCeeEEEeCCHHHHHHHHHhccccccCCCcccchhhh---------------ccCCc
Q 009821           74 LHRYFTKLSQIYGPIF--KFY-LGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAAASVL---------------TYGGK  135 (524)
Q Consensus        74 ~~~~~~~~~~kyG~i~--~~~-~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~~~~---------------~~~~~  135 (524)
                      ++..+.++ ++||||+  ++. +|+.++++|++|+.++++++++ ..|++++........               ...+.
T Consensus        47 p~~~~~~l-r~~gPV~~~~~~~~g~~~~~vvt~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~l  124 (450)
T 3tkt_A           47 LLDRFDAL-RAEAPVAKVVAPDDEHEPFWLVSSFDGVMKASKDN-ATFLNNPKSTVFTLRVGEMMAKAITGGSPHLVESL  124 (450)
T ss_dssp             HHHHHHHH-HHHCSEEEECCTTCSSCCEEEECSHHHHHHHHHCT-TTEESSSSCSSCCCHHHHHHHHHHHTSCSCSSCCG
T ss_pred             chHHHHHH-HhcCCeecccccCCCCCCEEEEecHHHHHHHHhCc-ccccCCCccccccccccccccccccccccccccCc
Confidence            77888888 6899999  888 7788999999999999999877 457766543221100               00122


Q ss_pred             ccccCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehhHHH-HHHHHHHHHHHHhccCCCCCCc
Q 009821          136 SIGASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVGELM-FLTSLDVATRMLWGASLRGEDW  214 (524)
Q Consensus       136 ~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~-~~~~~dvi~~~~fG~~~~~~~~  214 (524)
                      ...+|+.|+++|+.+. +.|++..++.+.+.+.+.++++++.+.+ .++++|+.+.+ ..+++++|+++ ||.+..+   
T Consensus       125 ~~~dg~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~-~~~~~dl~~~~~~~~~~~vi~~l-~G~~~~~---  198 (450)
T 3tkt_A          125 VQMDAPKHPKLRRLTQ-DWFMPKNLARLDGEIRKIANEAIDRMLG-AGEEGDFMALVAAPYPLHVVMQI-LGVPPED---  198 (450)
T ss_dssp             GGCCTTHHHHHHHHHH-TTTSHHHHGGGHHHHHHHHHHHHHHHHH-TCSEEEHHHHTTTHHHHHHHHHH-TTCCGGG---
T ss_pred             ccCCCHHHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCEeeHHHHHHHHHHHHHHHH-cCCChhH---
Confidence            2238999999999987 8999999999999999999999999876 36789988777 69999999995 8975421   


Q ss_pred             hHHHHHHHHHHHHHHHHhcCCCcccccccccccC-ccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcccHHHHH
Q 009821          215 DAVAIQFREVLEEMFQVLGSGNISDLFPLLTRFD-LQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSSKDFLQTL  293 (524)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~-~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~l  293 (524)
                         ...+......++    ........++..++. .....++..+..+.+.+++.+.+++++++.       .+|+++.|
T Consensus       199 ---~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~-------~~dll~~l  264 (450)
T 3tkt_A          199 ---EPKMLFLTQQMF----GGQDEDMNKSGLKDLPPEQISQIVAGAVAEFERYFAGLAAERRRNP-------TDDVATVI  264 (450)
T ss_dssp             ---HHHHHHHHHTTS----CCC----------------HHHHHHHHHHHHHHHHHHHHHHHHHSC-------CSSHHHHH
T ss_pred             ---HHHHHHHHHHHh----ccccchhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhCC-------CCCHHHHH
Confidence               123333333222    111111222221111 122346677788888999999998876542       36899999


Q ss_pred             HHHhhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcccccccCCChhHHH
Q 009821          294 LELQQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLPYLEA  373 (524)
Q Consensus       294 l~~~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a  373 (524)
                      ++... ++..++++++.++++ .+++||+|||+++++|++++|++||++|+|+|+|++                  |+++
T Consensus       265 l~~~~-~~~~ls~~ei~~~~~-~l~~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a  324 (450)
T 3tkt_A          265 ANAVV-DGEPMSDRDTAGYYI-ITASAGHDTTSASSAGAALALARDPDLFARVKADRN------------------LLPG  324 (450)
T ss_dssp             HTCEE-TTEECCHHHHHHHHH-HHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GHHH
T ss_pred             Hhccc-cCCCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHCHH------------------HHHH
Confidence            98754 345699999999999 999999999999999999999999999999999963                  7999


Q ss_pred             HHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCcccCCccceee
Q 009821          374 IVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGDFRGNNFNYLP  453 (524)
Q Consensus       374 ~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~~~~~~~~~p  453 (524)
                      ||+|+||++|+++. ++|.+.+|++++||.||||+.|.++.+++||||++|+||++||||||.            ..++|
T Consensus       325 ~i~E~LRl~pp~~~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~~~dP~~F~PeR~~------------~~~l~  391 (450)
T 3tkt_A          325 IVEEAIRWTTPVQH-FMRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKFDPTRPA------------NRHLA  391 (450)
T ss_dssp             HHHHHHHHHCSBCE-EEEEESSSEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTSCT------------TCSST
T ss_pred             HHHHHHHhCCCccC-cceeeCCCeeECCEEECCCCEEEEChHHhcCChhhCCCcCeeCCCCCC------------CCCCC
Confidence            99999999999995 789999999999999999999999999999999999999999999942            25899


Q ss_pred             cCCCCCCCCCHHHHHHHHHHHHHHHhhhce-eeCCC
Q 009821          454 FGSGRRICPGIPLAEKIVPHVLANLLHLFE-WSLPE  488 (524)
Q Consensus       454 Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~-~~~~~  488 (524)
                      ||+|+|.|+|++||++|++++++.|+++|+ +++..
T Consensus       392 FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~  427 (450)
T 3tkt_A          392 FGAGSHQCLGLHLARLEMRVLLDVLLDRVDSLELAG  427 (450)
T ss_dssp             TCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEEESS
T ss_pred             CCCcCccCccHHHHHHHHHHHHHHHHHhCCCceeCC
Confidence            999999999999999999999999999998 67653


No 68 
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=100.00  E-value=5.6e-58  Score=443.67  Aligned_cols=340  Identities=16%  Similarity=0.223  Sum_probs=273.2

Q ss_pred             HHHHHHHhCCeEEEecC-Ce---eEEEeCCHHHHHHHH-HhccccccCCCc------ccc---hhhh-ccCCcccccCCc
Q 009821           78 FTKLSQIYGPIFKFYLG-RK---LCIVIGSPSLAKQVL-KEHDVVFANRDP------SAA---ASVL-TYGGKSIGASPE  142 (524)
Q Consensus        78 ~~~~~~kyG~i~~~~~g-~~---~~vvv~dp~~i~~il-~~~~~~~~~~~~------~~~---~~~~-~~~~~~~~~~~~  142 (524)
                      +..++++ |||++++++ +.   ++++|+||+.+++++ +++  .|++++.      ...   .... ...+....+|+.
T Consensus        19 ~~~l~~~-Gpv~~~~~~~g~~~~~~vvv~~~~~v~~vl~~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~   95 (398)
T 1lfk_A           19 ADELLAA-GALTRVTIGSGADAETHWMATAHAVVRQVMGDHQ--QFSTRRRWDPRDEIGGKGIFRPRELVGNLMDYDPPE   95 (398)
T ss_dssp             CHHHHTS-CSEEEEC------CCCEEEECSHHHHHHHHHCTT--TEEECTTCCC-------------CCTTCGGGCCTTH
T ss_pred             hHHHHhc-CCccccccCCCCcccceEEEecHHHHHHHHhhCc--ccccccccccccccCCcccccccccccCccccCCHH
Confidence            4456666 999999875 45   799999999999999 543  2555543      110   1111 111222238999


Q ss_pred             hHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehhHHHHH-HHHHHHHHHHhccCCCCCCchHHHHHH
Q 009821          143 WPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVGELMFL-TSLDVATRMLWGASLRGEDWDAVAIQF  221 (524)
Q Consensus       143 w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~~~-~~~dvi~~~~fG~~~~~~~~~~~~~~~  221 (524)
                      |+++|+.+. +.|+...++.+.+.+.+.++++++.+.. .++++|+.+.+.. ++.++++. +||.++.+      ...+
T Consensus        96 ~~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~-~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~------~~~~  166 (398)
T 1lfk_A           96 HTRLRRKLT-PGFTLRKMQRMAPYIEQIVNDRLDEMER-AGSPADLIAFVADKVPGAVLCE-LVGVPRDD------RDMF  166 (398)
T ss_dssp             HHHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHHHHH-HCSSEEHHHHTTTTHHHHHHHH-HHTCCGGG------HHHH
T ss_pred             HHHHHHHHH-hhhCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCccHHHHHHHHHHHHHHHH-HcCCCHHH------HHHH
Confidence            999999997 8899999999999999999999999864 4668999998886 89999998 58987642      1233


Q ss_pred             HHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcccHHHHHHHHhhcCC
Q 009821          222 REVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSSKDFLQTLLELQQQGD  301 (524)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~  301 (524)
                      ......++.         ..         ...++..+..+.+.+++.+.+++++++.       ..|+++.|++..   +
T Consensus       167 ~~~~~~~~~---------~~---------~~~~~~~~~~~~~~~~~~~~i~~r~~~~-------~~dll~~ll~~~---~  218 (398)
T 1lfk_A          167 MKLCHGHLD---------AS---------LSQKRRAALGDKFSRYLLAMIARERKEP-------GEGMIGAVVAEY---G  218 (398)
T ss_dssp             HHHHHHTTC---------TT---------SCHHHHHHHHHHHHHHHHHHHHHHHHSC-------CSSHHHHHHHHH---G
T ss_pred             HHHHHHHHh---------cc---------cchHHHHHHHHHHHHHHHHHHHHHHhCC-------CCCHHHHHHHhc---C
Confidence            333322210         00         1124566677788888888888876532       358999999875   2


Q ss_pred             CCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcccccccCCChhHHHHHHhhhcC
Q 009821          302 YSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLPYLEAIVKETLRL  381 (524)
Q Consensus       302 ~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl  381 (524)
                      ..++++++.+++. .+++||+|||+++++|++++|++||++|+|+++|++                  |++|||+|+||+
T Consensus       219 ~~l~~~el~~~~~-~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl  279 (398)
T 1lfk_A          219 DDATDEELRGFCV-QVMLAGDDNISGMIGLGVLAMLRHPEQIDAFRGDEQ------------------SAQRAVDELIRY  279 (398)
T ss_dssp             GGSCHHHHHHHHH-HHHHHTSHHHHHHHHHHHHHHHHSGGGGGGGSSCHH------------------HHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHH-HHHHHhccHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------HHHHHHHHHHHh
Confidence            4689999999998 999999999999999999999999999999999975                  789999999999


Q ss_pred             CCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCcccCCccceeecCCCCCCC
Q 009821          382 HPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGDFRGNNFNYLPFGSGRRIC  461 (524)
Q Consensus       382 ~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~~~~~~~~~pFg~G~r~C  461 (524)
                      +|+++..++|.+.+|++++||.||||+.|.++.+++||||++|+||++||||||.            ..++|||+|+|.|
T Consensus       280 ~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~------------~~~l~FG~G~r~C  347 (398)
T 1lfk_A          280 LTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLPAANRDPALAPDVDRLDVTREP------------IPHVAFGHGVHHC  347 (398)
T ss_dssp             HCCBSCCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCTTSCC------------CCCCTTCCSTTSC
T ss_pred             CcccccccceecCCCeeECCEEECCCCEEEeChHHhCCCchhcCCccccCCCCCC------------CCCCCCCCCCCcC
Confidence            9999966899999999999999999999999999999999999999999999983            2489999999999


Q ss_pred             CCHHHHHHHHHHHHHHHhhhc-eeeCCC
Q 009821          462 PGIPLAEKIVPHVLANLLHLF-EWSLPE  488 (524)
Q Consensus       462 ~G~~~A~~e~~~~l~~ll~~f-~~~~~~  488 (524)
                      +|++||.+|++++++.|+++| ++++.+
T Consensus       348 ~G~~lA~~e~~~~l~~ll~~f~~~~l~~  375 (398)
T 1lfk_A          348 LGAALARLELRTVFTELWRRFPALRLAD  375 (398)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHCTTCEESS
T ss_pred             CCHHHHHHHHHHHHHHHHHhCCCCEeCC
Confidence            999999999999999999999 899864


No 69 
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=100.00  E-value=6.2e-56  Score=432.01  Aligned_cols=376  Identities=17%  Similarity=0.199  Sum_probs=291.1

Q ss_pred             CCChhHHHHHHHHHhCCeEEEec-CCeeEEEeCCHHHHHHHHHhccccccCCCc---ccch--------hhhccCCcccc
Q 009821           71 EPNLHRYFTKLSQIYGPIFKFYL-GRKLCIVIGSPSLAKQVLKEHDVVFANRDP---SAAA--------SVLTYGGKSIG  138 (524)
Q Consensus        71 ~~~~~~~~~~~~~kyG~i~~~~~-g~~~~vvv~dp~~i~~il~~~~~~~~~~~~---~~~~--------~~~~~~~~~~~  138 (524)
                      ..+++.++.+++++ |||+++.. ++.++++|++++.++++++++.. |+++..   ....        ......+....
T Consensus        37 ~~~p~~~~~~lr~~-gpv~~~~~~~~~~~~vvt~~~~v~~vl~d~~~-fs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  114 (426)
T 3rwl_A           37 NDSVGEYFKRLRKD-DPVHYCADSAFGPYWSITKYNDIMHVDTNHDI-FSSDAGYGGIIIDDGIQKGGDGGLDLPNFIAM  114 (426)
T ss_dssp             TTCHHHHHHHHHHH-CSEEEESCCTTCSEEEECSHHHHHHHHHCTTT-EECCGGGTCSSSSCCC-------CCCCCGGGC
T ss_pred             cCCccHHHHHHHhc-CCeeeccCCCCCCEEEEcCHHHHHHHHcCCcc-cccccccCCCCcccccccccccccccCccccc
Confidence            35689999999766 99999977 45679999999999999988753 554431   1100        01111112223


Q ss_pred             cCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehhHHH-HHHHHHHHHHHHhccCCCCCCchHH
Q 009821          139 ASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVGELM-FLTSLDVATRMLWGASLRGEDWDAV  217 (524)
Q Consensus       139 ~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~-~~~~~dvi~~~~fG~~~~~~~~~~~  217 (524)
                      +|+.|+++|+.+. +.|++..++.+.+.+.+.++++++.+..  ++++|+...+ ..++.++++. +||.+..+.     
T Consensus       115 dg~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~--~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~~-----  185 (426)
T 3rwl_A          115 DRPRHDEQRKAVS-PIVAPANLAALEGTIRERVSKTLDGLPV--GEEFDWVDRVSIEITTQMLAT-LFDFPFEER-----  185 (426)
T ss_dssp             CTTHHHHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHTSCS--SSCEEHHHHTHHHHHHHHHHH-HHTCCGGGT-----
T ss_pred             CchHHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHhhc--CCCcchHHHHHHHHHHHHHHH-HcCCCHHHH-----
Confidence            8999999999997 8999999999999999999999998854  6789966655 6888898886 899764322     


Q ss_pred             HHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcccHHHHHHHHh
Q 009821          218 AIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSSKDFLQTLLELQ  297 (524)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~  297 (524)
                       ..+.....    .+.....    +..     ....+...+..+.+.+++.+.+++++++      ....|+++.|++..
T Consensus       186 -~~~~~~~~----~~~~~~~----~~~-----~~~~~~~~~~~~~~~~~~~~~i~~r~~~------~~~~dll~~ll~~~  245 (426)
T 3rwl_A          186 -RKLTRWSD----VTTAAPG----GGV-----VESWDQRKTELLECAAYFQVLWNERVNK------DPGNDLISMLAHSP  245 (426)
T ss_dssp             -HHHHHHHH----HHTCCTT----SSS-----CSSHHHHHHHHHHHHHHHHHHHHHHHTS------CCCSSHHHHHHHCG
T ss_pred             -HHHHHHHH----HHHhccC----ccc-----cccHHHHHHHHHHHHHHHHHHHHHHhhc------CCCCCHHHHHHhcc
Confidence             22322221    1111100    000     1123445566778888888888877322      23479999999876


Q ss_pred             hcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcccccccCCChhHHHHHHh
Q 009821          298 QQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLPYLEAIVKE  377 (524)
Q Consensus       298 ~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E  377 (524)
                      .+  ..++++++.++++ .+++||+|||+++++|++++|++||++|+|+|+|+                  +|+++||+|
T Consensus       246 ~~--~~ls~~el~~~~~-~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~E~------------------~~l~a~i~E  304 (426)
T 3rwl_A          246 AT--RNMTPEEYLGNVL-LLIVGGNDTTRNSMTGGVLALHKNPDQFAKLKANP------------------ALVETMVPE  304 (426)
T ss_dssp             GG--GGCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCG------------------GGHHHHHHH
T ss_pred             cC--CCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhCh------------------HhHHHHHHH
Confidence            54  3489999999998 99999999999999999999999999999999994                  389999999


Q ss_pred             hhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCcccCCccceeecCCC
Q 009821          378 TLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGDFRGNNFNYLPFGSG  457 (524)
Q Consensus       378 ~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~~~~~~~~~pFg~G  457 (524)
                      +||++|+++. ++|.+.+|++++||.||||+.|.++.+++||||++|+||++||||||..           ..++|||+|
T Consensus       305 ~LRl~p~~~~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~f~dP~~F~p~R~~~-----------~~~l~FG~G  372 (426)
T 3rwl_A          305 IIRWQTPLAH-MRRTAIADSELGGKTIRKGDKVVMWYYSGNRDDEVIDRPEEFIIDRPRP-----------RQHLSFGFG  372 (426)
T ss_dssp             HHHHHCSBCC-EEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSCT-----------TCCSTTCCS
T ss_pred             HHHhcCcccc-CceecCCCeEECCEEECCCCEEEechHHhCCCccccCCcCccCCCCCCC-----------CCccCCCCC
Confidence            9999999998 7899999999999999999999999999999999999999999999952           359999999


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHhhhc-eeeCCCCCCCCcccccccccccCCCceeeeec
Q 009821          458 RRICPGIPLAEKIVPHVLANLLHLF-EWSLPEGTKFDLSDKLLMALKKSEPLVVIPTP  514 (524)
Q Consensus       458 ~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  514 (524)
                      +|.|+|++||.+|++++++.|+++| ++++.++..  ..  ..........++|+++|
T Consensus       373 ~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~--~~--~~~~~~g~~~lpv~~~P  426 (426)
T 3rwl_A          373 IHRCVGNRLAEMQLRILWEEILTRFSRIEVMAEPE--RV--RSNFVRGYAKMMVRVHA  426 (426)
T ss_dssp             TTSCSSHHHHHHHHHHHHHHHHTTCSEEEECSCCE--EC--CCSSBCCEEECEEEEEC
T ss_pred             CcCCccHHHHHHHHHHHHHHHHHhCccCeeCCCCc--cc--ccccccCcceeeEEEeC
Confidence            9999999999999999999999999 999875422  11  12223333456676654


No 70 
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=100.00  E-value=1.6e-55  Score=421.08  Aligned_cols=350  Identities=19%  Similarity=0.221  Sum_probs=275.3

Q ss_pred             hHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCc-cc-ch-----h--hhc---cCCcccccCCc
Q 009821           75 HRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDP-SA-AA-----S--VLT---YGGKSIGASPE  142 (524)
Q Consensus        75 ~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~-~~-~~-----~--~~~---~~~~~~~~~~~  142 (524)
                      +..+.++ ++||||+++. |   .+++++|+.+++++.+++ .|++++. .. ..     .  ..+   ..+....+|+.
T Consensus         2 ~~~~~~l-r~~gpv~~~~-g---~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~~   75 (367)
T 3b4x_A            2 YDWFKQM-RKESPVYYDG-K---VWNLFKYEDCKMVLNDHK-RFSSNLTGYNDKLEMLRSGKVFFDIPTRYTMLTSDPPL   75 (367)
T ss_dssp             HHHHHHH-HHHCSEEECS-S---SEEECSHHHHHHHHHCTT-TEECCCSSTTTTHHHHHHTCCCCCCGGGSSGGGCCTTH
T ss_pred             CHHHHHH-HHcCCceeeC-C---EEEEecHHHHHHHHcCch-hhccCcccccccccccccccchhhcccccccccCCchh
Confidence            5667777 5899999987 3   789999999999999764 4766632 11 11     1  111   12223339999


Q ss_pred             hHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehhHH-HHHHHHHHHHHHHhccCCCCCCchHHHHHH
Q 009821          143 WPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVGEL-MFLTSLDVATRMLWGASLRGEDWDAVAIQF  221 (524)
Q Consensus       143 w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~-~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~  221 (524)
                      |+++|+.+. +.|+...++.  +.+.+.++++++.+.   | .+|+.+. ...+++++|+. +||.+ +  +.    ..+
T Consensus        76 h~~~R~~~~-~~fs~~~l~~--~~i~~~~~~l~~~l~---g-~~d~~~~~~~~~~~~vi~~-~~G~~-~--~~----~~~  140 (367)
T 3b4x_A           76 HDELRNLTA-DAFNPSNLPV--DFVREVTVKLLSELD---E-EFDVIESFAIPLPILVISK-MLGIN-P--DV----KKV  140 (367)
T ss_dssp             HHHHHHTTG-GGGSGGGSCH--HHHHHHHHHHHHTCC---S-EEEHHHHTTTHHHHHHHHH-HHTCC-C--CH----HHH
T ss_pred             HHHHHHHHH-HhcCHhhhcc--hHHHHHHHHHHHhcc---C-CcchHHHHHHhhHHHHHHH-HcCCC-C--cH----HHH
Confidence            999999997 8899999988  999999999999886   3 4999865 48999999999 79987 3  21    334


Q ss_pred             HHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcccHHHHHHHHhhcCC
Q 009821          222 REVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSSKDFLQTLLELQQQGD  301 (524)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~  301 (524)
                      ......+...+.      ..|...        +.. +..+.+.+++.+.+++++++       ...|+++.+++.     
T Consensus       141 ~~~~~~~~~~~~------~~p~~~--------~~~-~~~~~~~~~~~~~i~~r~~~-------~~~dll~~ll~~-----  193 (367)
T 3b4x_A          141 KDWSDLVALRLG------RADEIF--------SIG-RKYLELISFSKKELDSRKGK-------EIVDLTGKIANS-----  193 (367)
T ss_dssp             HHHHHHHHTTTT------STTGGG--------CCC-HHHHHHHHHHHHHHHHHTTT-------CCSSHHHHHHTS-----
T ss_pred             HHHHHHHHhccC------CChhhH--------HHH-HHHHHHHHHHHHHHHHHhcC-------CCCCHHHHHHhc-----
Confidence            444444332211      122110        111 45566777888888776543       236899999974     


Q ss_pred             CCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcccccccCCChhHHHHHHhhhcC
Q 009821          302 YSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLPYLEAIVKETLRL  381 (524)
Q Consensus       302 ~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl  381 (524)
                       .++++++.+++. .+++||+|||+++++|++++|++ |++|+|+++|++                    +|||+|+||+
T Consensus       194 -~ls~~el~~~~~-~l~~AG~eTt~~~l~~~l~~L~~-P~~~~~l~~e~~--------------------~a~i~E~lRl  250 (367)
T 3b4x_A          194 -NLSELEKEGYFI-LLMIAGNETTTNLIGNAIEDFTL-YNSWDYVREKGA--------------------LKAVEEALRF  250 (367)
T ss_dssp             -SSCHHHHHHHHH-HHHHTTTHHHHHHHHHHHHHHHH-TTCHHHHHHHCS--------------------HHHHHHHHHH
T ss_pred             -cCCHHHHHHHHH-HHHHhhhHHHHHHHHHHHHHHhC-HHHHHHHHhCCc--------------------hHHHHHHHHh
Confidence             589999999998 99999999999999999999999 999999999964                    7999999999


Q ss_pred             CCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCcccCCccceeecCCCCCCC
Q 009821          382 HPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGDFRGNNFNYLPFGSGRRIC  461 (524)
Q Consensus       382 ~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~~~~~~~~~pFg~G~r~C  461 (524)
                      +|+++. ++|.+.+|++++||.||||+.|.++.+++||||++|+||++||||||.            ..++|||+|+|.|
T Consensus       251 ~p~~~~-~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~------------~~~l~FG~G~r~C  317 (367)
T 3b4x_A          251 SPPVMR-TIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPDRTP------------NPHLSFGSGIHLC  317 (367)
T ss_dssp             SCSBCC-EEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSS------------CCCCTTCCSTTSC
T ss_pred             cCcccC-eeEEeCCCeEECCEEECCCCEEEEChhhhcCCcccCCCccccCCCCCC------------CCCcCCCCCCccC
Confidence            999994 789999999999999999999999999999999999999999999984            2589999999999


Q ss_pred             CCHHHHHHHHHHHHHHHhhhc-eeeCCCCCCCCcccccccccccCCCceeeee
Q 009821          462 PGIPLAEKIVPHVLANLLHLF-EWSLPEGTKFDLSDKLLMALKKSEPLVVIPT  513 (524)
Q Consensus       462 ~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  513 (524)
                      +|++||++|++++++.|+++| ++++.++   ++..  .........++|+++
T Consensus       318 ~G~~lA~~e~~~~l~~ll~~f~~~~l~~~---~~~~--~~~~~~~~~lpv~~~  365 (367)
T 3b4x_A          318 LGAPLARLEARIALEEFAKKFRVKEIVKK---EKID--NEVLNGYRKLVVRVE  365 (367)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHEEEEEEEEE---EECC--CSSBCSEEEEEEEEE
T ss_pred             ccHHHHHHHHHHHHHHHHHhCCCceeCCc---cccc--cccccCcceEEEEec
Confidence            999999999999999999999 7998753   2222  233334456777664


No 71 
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=100.00  E-value=6.2e-55  Score=421.15  Aligned_cols=352  Identities=19%  Similarity=0.192  Sum_probs=279.4

Q ss_pred             CChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCcccchhh-hc-cCCcccccCCchHHHHHH
Q 009821           72 PNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAAASV-LT-YGGKSIGASPEWPKLRQV  149 (524)
Q Consensus        72 ~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~w~~~R~~  149 (524)
                      .+++.++.++++ +|||+++..|   .+++++++.++++++++.  |+.++....... .. ..+....+|+.|+++|+.
T Consensus        20 ~dp~~~~~~lr~-~~pv~~~~~g---~~~v~~~~~v~~~l~d~~--fs~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~~   93 (394)
T 2wiy_A           20 NNPYPWYRRLQQ-DHPVHKLEDG---TYLVSRYADVSHFAKLPI--MSVEPGWADAGPWAVASDTALGSDPPHHTVLRRQ   93 (394)
T ss_dssp             HCCHHHHHHHHH-HCSEEECTTS---CEEECCHHHHHHHTTSTT--EECHHHHHTCGGGGGGGGSGGGCCTTHHHHHHHH
T ss_pred             cCccHHHHHHHh-cCCeEEecCC---eEEEcCHHHHHHHHcCCC--ccccccccccccchhcccccccCCchHHHHHHHH
Confidence            467888888855 5899987653   689999999999997653  443321110011 11 112222389999999999


Q ss_pred             HHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehhHHHHHHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHH
Q 009821          150 LVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVGELMFLTSLDVATRMLWGASLRGEDWDAVAIQFREVLEEMF  229 (524)
Q Consensus       150 ~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~  229 (524)
                      +. +.|+++.++.+.+.+.+.++++++.+..  ++++|+...+..+++++++..+||.+..+  .    ..+...+...+
T Consensus        94 ~~-~~fs~~~~~~~~~~i~~~~~~l~~~~~~--~~~~d~~~~~~~~~~~vi~~~~~G~~~~~--~----~~~~~~~~~~~  164 (394)
T 2wiy_A           94 TN-KWFTPKLVDGWVRTTRELVGDLLDGVEA--GQVIEARRDLAVVPTHVTMARVLQLPEDD--A----DAVMEAMFEAM  164 (394)
T ss_dssp             HH-TTCSHHHHHHHTHHHHHHHHHHHHTCCT--TCCEEHHHHHTHHHHHHHHHHHHTCCCCC--H----HHHHHHHHHHH
T ss_pred             HH-hccCHHHHHHHHHHHHHHHHHHHHHHhc--cCCeeHHHHHHhhhHHHHHHHHcCCCHhH--H----HHHHHHHHHHH
Confidence            87 8999999999999999999999998764  67899999999999999999999986532  1    23333322221


Q ss_pred             HHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcccHHHHHHHHhhcCCCCCcHHHH
Q 009821          230 QVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSSKDFLQTLLELQQQGDYSLSMDQI  309 (524)
Q Consensus       230 ~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~l~~~~i  309 (524)
                      .  ..    ...|..      ...++..+....+.+++.+.+++++.+.       .+|+++.|++...+  ..++++++
T Consensus       165 ~--~~----~~~p~~------~~~~~~~~~~~~l~~~~~~~i~~rr~~~-------~~dll~~Ll~~~~~--~~ls~~el  223 (394)
T 2wiy_A          165 L--MQ----SAEPAD------GDVDRAAVAFGYLSARVAEMLEDKRVNP-------GDGLADSLLDAARA--GEITESEA  223 (394)
T ss_dssp             G--GG----SSSCCT------THHHHHHHHHHHHHHHHHHHHHHHHHSC-------CSSHHHHHHHHHHT--TSSCHHHH
T ss_pred             H--hc----cCCccc------hHHHHHHHHHHHHHHHHHHHHHHhhcCC-------CCcHHHHHHHhhhc--CCCCHHHH
Confidence            1  00    011211      1123445566777888888888776432       25899999987643  35899999


Q ss_pred             HHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcccccccCCChhHHHHHHhhhcCCCCCCCcC
Q 009821          310 KALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLPYLEAIVKETLRLHPPAPLLT  389 (524)
Q Consensus       310 ~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~  389 (524)
                      .++++ .+++||+|||+++++|++++|++||++|+|+++|+.                  |+++||+|+||++|+++. +
T Consensus       224 ~~~~~-~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~~------------------~l~a~i~E~LRl~pp~~~-~  283 (394)
T 2wiy_A          224 IATIL-VFYAVGHMAIGYLIASGIELFARRPEVFTAFRNDES------------------ARAAIINEMVRMDPPQLS-F  283 (394)
T ss_dssp             HHHHH-HHHHHTTTHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GHHHHHHHHHHHSCSBCE-E
T ss_pred             HHHHH-HHHHhhhhhHHHHHHHHHHHHHHCHHHHHHHHhChH------------------hHHHHHHHHHhhCCCccC-e
Confidence            99998 999999999999999999999999999999999862                  789999999999999986 6


Q ss_pred             ccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCcccCCccceeecCCCCCCCCCHHHHHH
Q 009821          390 SRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGDFRGNNFNYLPFGSGRRICPGIPLAEK  469 (524)
Q Consensus       390 ~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~  469 (524)
                      +|.+.+|++++|+.||+|+.|.++.+++||||++|+||++||||||...          ..++|||+|+|.|+|++||++
T Consensus       284 ~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~~dP~~F~p~R~~~~----------~~~l~FG~G~r~C~G~~lA~~  353 (394)
T 2wiy_A          284 LRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHTRPPAA----------SRNLSFGLGPHSCAGQIISRA  353 (394)
T ss_dssp             EEEESSCEEETTEEECTTCCEEEEHHHHTTCTTTSSSTTSCCTTCCGGG----------SCCSTTCCGGGSCTTHHHHHH
T ss_pred             eEEECCCEEEcCeecCCCCEEEeChHhhcCCcccCCCccccCCCCCCCC----------CCccCCCCCCCcCCcHHHHHH
Confidence            8999999999999999999999999999999999999999999999732          258999999999999999999


Q ss_pred             HHHHHHHHHhhhce-eeCCCC
Q 009821          470 IVPHVLANLLHLFE-WSLPEG  489 (524)
Q Consensus       470 e~~~~l~~ll~~f~-~~~~~~  489 (524)
                      |++++++.|+++|+ +++.++
T Consensus       354 e~~~~l~~ll~~~~~~~l~~~  374 (394)
T 2wiy_A          354 EATTVFAVLAERYERIELAEE  374 (394)
T ss_dssp             HHHHHHHHHHHHCSCEEESSC
T ss_pred             HHHHHHHHHHHhCCCceECCC
Confidence            99999999999998 998753


No 72 
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=100.00  E-value=2.5e-55  Score=420.52  Aligned_cols=353  Identities=18%  Similarity=0.223  Sum_probs=277.2

Q ss_pred             hHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCc--c--cc-h--hh--hc--c-CCcccccCCc
Q 009821           75 HRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDP--S--AA-A--SV--LT--Y-GGKSIGASPE  142 (524)
Q Consensus        75 ~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~--~--~~-~--~~--~~--~-~~~~~~~~~~  142 (524)
                      +..+.++ ++||||+++  |  +.++++||+.+++++.+++ .|++++.  .  .. .  ..  ..  . .+....+|+.
T Consensus         2 ~~~~~~l-r~~Gpv~~~--g--~~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~   75 (368)
T 1io7_A            2 YDWFSEM-RKKDPVYYD--G--NIWQVFSYRYTKEVLNNFS-KFSSDLTGYHERLEDLRNGKIRFDIPTRYTMLTSDPPL   75 (368)
T ss_dssp             HHHHHHH-HHHCSEEEC--S--SCEEECSHHHHHHHHHCTT-TEECCCSSHHHHHHHHTTTCCCCSCGGGSSGGGCCTTH
T ss_pred             CHHHHHH-HhcCCeEeE--C--CEEEEecHHHHHHHHcCcc-cccccccccccccccccccccccccccccccccCCChH
Confidence            5677777 599999987  4  4789999999999999764 5777653  1  11 0  01  11  1 2222338999


Q ss_pred             hHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehhHHH-HHHHHHHHHHHHhccCCCCCCchHHHHHH
Q 009821          143 WPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVGELM-FLTSLDVATRMLWGASLRGEDWDAVAIQF  221 (524)
Q Consensus       143 w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~-~~~~~dvi~~~~fG~~~~~~~~~~~~~~~  221 (524)
                      |+++|+.+. +.|+...++.+.+.+.+.++++++.+ . . +++|+.+.+ ..+++|+++.+ ||.++++.      ..+
T Consensus        76 h~~~R~~~~-~~f~~~~~~~~~~~i~~~~~~l~~~l-~-~-g~~d~~~~~~~~~~~~vi~~~-~G~~~~~~------~~~  144 (368)
T 1io7_A           76 HDELRSMSA-DIFSPQKLQTLETFIRETTRSLLDSI-D-P-REDDIVKKLAVPLPIIVISKI-LGLPIEDK------EKF  144 (368)
T ss_dssp             HHHHHGGGT-TTTCHHHHHHHHHHHHHHHHHHHHTC-C-T-TSEEHHHHTTTHHHHHHHHHH-HTCCGGGH------HHH
T ss_pred             HHHHHHHHH-hhcCHHHHHHHHHHHHHHHHHHHHHh-h-c-CCccHHHHHHHHHHHHHHHHH-hCCCHHHH------HHH
Confidence            999999997 89999999999999999999999999 4 3 379999866 78999999999 99876421      223


Q ss_pred             HHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcccHHHHHHHHhhcCC
Q 009821          222 REVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSSKDFLQTLLELQQQGD  301 (524)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~  301 (524)
                      ......+.    .. ..  .|.        ..++..+..+.+.+++.+.+     +       ...|+++.+++.     
T Consensus       145 ~~~~~~~~----~~-~~--~p~--------~~~~~~~~~~~~~~~~~~~i-----~-------~~~d~l~~ll~~-----  192 (368)
T 1io7_A          145 KEWSDLVA----FR-LG--KPG--------EIFELGKKYLELIGYVKDHL-----N-------SGTEVVSRVVNS-----  192 (368)
T ss_dssp             HHHGGGCT----TS-CC--CTT--------CHHHHHHHHHHHHHHHHHHT-----T-------SSCHHHHHHHTS-----
T ss_pred             HHHHHHHH----hc-cC--ChH--------HHHHHHHHHHHHHHHHHHHh-----C-------CCCCHHHHHHhc-----
Confidence            22211111    00 00  121        12445566777778887777     1       135899999864     


Q ss_pred             CCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcccccccCCChhHHHHHHhhhcC
Q 009821          302 YSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLPYLEAIVKETLRL  381 (524)
Q Consensus       302 ~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl  381 (524)
                       .++++++.+++. .+++||+|||+++++|++++|++|| +|+|+++| +                  |++|||+|+||+
T Consensus       193 -~l~~~ei~~~~~-~l~~AG~dTt~~~l~~~l~~L~~~P-~~~~l~~E-~------------------~l~a~i~E~lRl  250 (368)
T 1io7_A          193 -NLSDIEKLGYII-LLLIAGNETTTNLISNSVIDFTRFN-LWQRIREE-N------------------LYLKAIEEALRY  250 (368)
T ss_dssp             -SCCHHHHHHHHH-HHHHTTHHHHHHHHHHHHHHHHHTT-CHHHHHHH-T------------------CHHHHHHHHHHH
T ss_pred             -cCCHHHHHHHHH-HHHHhhhHHHHHHHHHHHHHHHhCh-HHHHHHhc-c------------------hHHHHHHHHHHh
Confidence             588999999998 9999999999999999999999999 99999999 2                  689999999999


Q ss_pred             CCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCcccCCccceeecCCCCCCC
Q 009821          382 HPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGDFRGNNFNYLPFGSGRRIC  461 (524)
Q Consensus       382 ~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~~~~~~~~~pFg~G~r~C  461 (524)
                      +|+++. ++|.+.+|++++||.||||+.|.++.+++||||++|+||++|||||+-            ..++|||+|+|.|
T Consensus       251 ~p~~~~-~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~------------~~~~~FG~G~r~C  317 (368)
T 1io7_A          251 SPPVMR-TVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKFIPDRNP------------NPHLSFGSGIHLC  317 (368)
T ss_dssp             SCSBCC-EEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCCS------------CCCCTTCCGGGSC
T ss_pred             Cccccc-CceeeCCCeeECCEEECCCCEEEecHhhhCCChhhCCCcceeCCCCCC------------CCCcCCCCCccCC
Confidence            999994 799999999999999999999999999999999999999999999931            2589999999999


Q ss_pred             CCHHHHHHHHHHHHHHHhhhce-eeCCCCCCCCcccccccccccCCCceeeeecCC
Q 009821          462 PGIPLAEKIVPHVLANLLHLFE-WSLPEGTKFDLSDKLLMALKKSEPLVVIPTPRS  516 (524)
Q Consensus       462 ~G~~~A~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  516 (524)
                      +|++||.+|++++++.|+++|+ +++.+   .++..  ..+......++|++++|+
T Consensus       318 ~G~~lA~~e~~~~l~~ll~~f~~~~~~~---~~~~~--~~~~~~~~~lpv~~~~r~  368 (368)
T 1io7_A          318 LGAPLARLEARIAIEEFSKRFRHIEILD---TEKVP--NEVLNGYKRLVVRLKSNE  368 (368)
T ss_dssp             TTHHHHHHHHHHHHHHHHTTCSEEEEEE---EEECC--CSSBCCEEEEEEEEEC--
T ss_pred             CCHHHHHHHHHHHHHHHHHhCCCCEecC---ceecc--CCcccCCceeEEEeccCC
Confidence            9999999999999999999996 99864   12211  233445567889998874


No 73 
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=100.00  E-value=3.1e-55  Score=415.60  Aligned_cols=320  Identities=18%  Similarity=0.218  Sum_probs=256.5

Q ss_pred             HHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCcccchhhhccCCcccccCCchHHHHHHHHHhhcCcchhhh
Q 009821           83 QIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAAASVLTYGGKSIGASPEWPKLRQVLVRETMSNTSLNS  162 (524)
Q Consensus        83 ~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~  162 (524)
                      ++||||+++   |  .++++||+.+++++.+++ .|++++....... ...+....+|+.|+++|+.+. +.|+...++.
T Consensus         2 r~~gpv~~~---g--~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~~~-~~~~l~~~~g~~~~~~R~~~~-~~fs~~~l~~   73 (343)
T 2rfb_A            2 RLNDPVHYD---G--AWHVYKYSDVKHVLMNDK-IFSSNPGNRYSNA-GGISFITMDNPEHKEFRDISA-PYFLPSKIND   73 (343)
T ss_dssp             -CCCCEEET---T--EEEECSHHHHHHHHHCTT-TEESSCSSCCC----CCGGGGCCHHHHHHHHHHHH-HHHSHHHHGG
T ss_pred             CCcCCeeee---C--eEEEcCHHHHHHHHhChh-hcccCCcCCCCCc-cccccccCCchHHHHHHHHhh-hhcCHHHHHH
Confidence            589999986   3  899999999999998864 5776652111111 111222228899999999996 8999999999


Q ss_pred             cHHHHHHHHHHHHHHHhccCCCceehhHHH-HHHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHhcCCCccccc
Q 009821          163 SSAIRRQAVLRSMKDVSGRVGSPIKVGELM-FLTSLDVATRMLWGASLRGEDWDAVAIQFREVLEEMFQVLGSGNISDLF  241 (524)
Q Consensus       163 ~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~-~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (524)
                      +.+.+.+.++++++.+.     ++|+.+.+ ..+++|+++++ ||.+.++      ...+......++..        ..
T Consensus        74 ~~~~i~~~~~~l~~~l~-----~~d~~~~~~~~~~~~vi~~~-~G~~~~~------~~~~~~~~~~~~~~--------~~  133 (343)
T 2rfb_A           74 YKDFIEETSNDLIKNID-----NKDIISEYAVRLPVNIISKI-LGIPDSD------MPLFKLWSDYIIGN--------KR  133 (343)
T ss_dssp             GHHHHHHHHHHHHTTCT-----TSCHHHHTTTHHHHHHHHHH-HTCCGGG------HHHHHHHHHHHHTS--------CC
T ss_pred             HHHHHHHHHHHHHHhcc-----ccCHHHHHhhhhhHHHHHHH-cCCCHHH------HHHHHHHHHHHhhc--------cC
Confidence            99999999999998775     78988754 89999999998 9987642      13344443333221        01


Q ss_pred             ccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcccHHHHHHHHhhcCCCCCcHHHHHHHHHhhhhccc
Q 009821          242 PLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMVDVAIGS  321 (524)
Q Consensus       242 p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~l~~~~ag  321 (524)
                      |.+.     . .++. +..+.+.+++.+.+              ..| ++.+++...+ +..++++++.+++. .+++||
T Consensus       134 p~~~-----~-~~~~-~~~~~~~~~~~~~i--------------~~d-l~~ll~~~~~-~~~l~~~ei~~~~~-~~~~AG  189 (343)
T 2rfb_A          134 DENF-----N-YVNN-RMVSRLLEIFKSDS--------------HGI-INVLAGSSLK-NRKLTMDEKIKYIM-LLIIGG  189 (343)
T ss_dssp             SSHH-----H-HHHH-HHHHHHHHHHHSCC--------------SSH-HHHHHTCBCS-SSBCCHHHHHHHHH-HHHHHH
T ss_pred             cchh-----h-HHHH-HHHHHHHHHHHHHH--------------hcc-HHHHHhhhcC-CCCCCHHHHHHHHH-HHHHHh
Confidence            2210     1 1233 55556666655444              247 8888876432 44689999999999 999999


Q ss_pred             ccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcccccccCCChhHHHHHHhhhcCCCCC-CCcCccccCCCcccc
Q 009821          322 TDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLPYLEAIVKETLRLHPPA-PLLTSRRPSATSNLS  400 (524)
Q Consensus       322 ~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~-~~~~~R~~~~~~~~~  400 (524)
                      +|||+++++|++++|++||++|+|+++|+                     +|||+|+||++|++ + .++|.+.+|++++
T Consensus       190 ~dTt~~~l~~~l~~L~~~P~~~~~l~~E~---------------------~a~i~E~lRl~p~~~~-~~~R~~~~d~~~~  247 (343)
T 2rfb_A          190 NETTTNLIGNMIRVIDENPDIIDDALKNR---------------------SGFVEETLRYYSPIQF-LPHRFAAEDSYIN  247 (343)
T ss_dssp             HHHHHHHHHHHHHHHHHCGGGHHHHHHCH---------------------HHHHHHHHHHSCSBCC-BCCCEESSCEEET
T ss_pred             hHHHHHHHHHHHHHHHhCHHHHHHHHcCc---------------------HHHHHHHHhhCccccc-ccceEECCCeEEC
Confidence            99999999999999999999999999996                     79999999999999 8 4899999999999


Q ss_pred             ceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCcccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhh
Q 009821          401 GYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGDFRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLH  480 (524)
Q Consensus       401 g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~  480 (524)
                      ||.||||+.|.++.+++||||++|+||++||||||             ..++|||+|+|.|+|++||.+|++++++.|++
T Consensus       248 g~~Ip~Gt~V~~~~~~~~rd~~~~~dp~~F~PeR~-------------~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~  314 (343)
T 2rfb_A          248 NKKIKKGDQVIVYLGSANRDETFFDEPDLFKIGRR-------------EMHLAFGIGIHMCLGAPLARLEASIALNDILN  314 (343)
T ss_dssp             TEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCS-------------SCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHH
T ss_pred             CEEECCCCEEEEChhhhCCCcccCCCccccCCCCC-------------CCCccCCCCCccCCChHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999994             14899999999999999999999999999999


Q ss_pred             hce-eeCCCC
Q 009821          481 LFE-WSLPEG  489 (524)
Q Consensus       481 ~f~-~~~~~~  489 (524)
                      +|+ +++.++
T Consensus       315 ~f~~~~~~~~  324 (343)
T 2rfb_A          315 HFKRIKIDYK  324 (343)
T ss_dssp             HCSCCCBCTT
T ss_pred             hCCCceeCCC
Confidence            996 998875


No 74 
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=100.00  E-value=2.1e-55  Score=427.59  Aligned_cols=384  Identities=16%  Similarity=0.177  Sum_probs=291.5

Q ss_pred             CCceecccccCCCChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCcccch-----hh--hcc
Q 009821           60 ALPLVGNILSAEPNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAAA-----SV--LTY  132 (524)
Q Consensus        60 ~~p~iG~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~-----~~--~~~  132 (524)
                      .+|.++...  ..+++.+ . +.++|||++++.+|+.. ++|++|+.++++++++......+......     ..  ...
T Consensus        23 ~lp~~~~~~--~~~P~~~-~-~lr~~gpv~~~~~g~~~-~vv~~~~~v~~vL~d~~~~~~~~~~~~~~~~~~~~~~~~~~   97 (416)
T 3p3o_A           23 DLPFLDFTD--PNFSWDS-P-EVAEAREKSWIARTPLA-LLVLRYAEADQLARDKRLISGFRGLVDMVGTPEGPVRDFMV   97 (416)
T ss_dssp             TCCBCCTTS--TTCCTTS-H-HHHHHHHHCSEEECSSS-EEECSHHHHHHHHHCTTEECSHHHHHHHHTCCSSHHHHHHH
T ss_pred             CCCCCCccc--ccCCchH-H-HHHHhCCccccccCCCc-eEEeCHHHHHHHHcCcccccCCccccccccccccchhhhhc
Confidence            344444333  3466777 4 44689999999887656 89999999999998875322111100000     00  001


Q ss_pred             CCcccccCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehh-HHHHHHHHHHHHHHHhccCCCC
Q 009821          133 GGKSIGASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVG-ELMFLTSLDVATRMLWGASLRG  211 (524)
Q Consensus       133 ~~~~~~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~-~~~~~~~~dvi~~~~fG~~~~~  211 (524)
                      .+....+|+.|+++|+.+. +.|+.+.++.+.+.+.+.++++++.+ .  ++.+|+. ++...+++++|+. +||.+..+
T Consensus        98 ~~l~~~dg~~h~~~Rr~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l-~--~g~~d~~~~~~~~~~~~vi~~-l~G~~~~~  172 (416)
T 3p3o_A           98 DFLQSLDGADHRRLRGLAT-HPFTPRRITAVQPFVRSTVEQLIDKL-P--QGDFDFVQHFPHPLPALVMCQ-LLGFPLED  172 (416)
T ss_dssp             HSGGGCCHHHHHHHHHTTC-GGGSHHHHHHHHHHHHHHHHHHHHTC-C--SSSEEHHHHTTTHHHHHHHHH-HHTCCGGG
T ss_pred             CccccCCchHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHhh-c--cCCccHHHHHHHHHHHHHHHH-HhCCCHHH
Confidence            1222338999999999997 89999999999999999999999999 4  3459954 5556799999998 57875432


Q ss_pred             CCchHHHHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcccHHH
Q 009821          212 EDWDAVAIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSSKDFLQ  291 (524)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~  291 (524)
                            ...+......+...         +...   ......++..+..+.+.+++.+.+++++++       ...|+++
T Consensus       173 ------~~~~~~~~~~~~~~---------~~~~---~~~~~~~~~~~~~~~l~~~~~~~i~~rr~~-------~~~dll~  227 (416)
T 3p3o_A          173 ------YDTVGRLSIETNLG---------LALS---NDQDILVKVEQGLGRMFDYLVAAIEKRKVE-------PGDDLTS  227 (416)
T ss_dssp             ------HHHHHHHHHTTCGG---------GTTC---SCHHHHHHHHHHHHHHHHHHHHHHHHHHHS-------CCSSHHH
T ss_pred             ------HHHHHHHHHHHHhh---------cccc---cchhhHHHHHHHHHHHHHHHHHHHHHHHhC-------CCccHHH
Confidence                  12333322221111         1100   112234566778888999999999887654       2468999


Q ss_pred             HHHHHhhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcccccccCCChhH
Q 009821          292 TLLELQQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLPYL  371 (524)
Q Consensus       292 ~ll~~~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl  371 (524)
                      .|++...++  .++++++.+++. .+++||+|||+++++|++++|++||++|+|+++|++                  |+
T Consensus       228 ~ll~~~~~~--~ls~~el~~~~~-~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~~------------------~l  286 (416)
T 3p3o_A          228 DIVRAFHDG--VLDDYELRTLVA-TVLVAGYETTNHQLALAMYDFAQHPDQWMKIKENPE------------------LA  286 (416)
T ss_dssp             HHHHHHHTT--SSCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GH
T ss_pred             HHHHhhccC--CCCHHHHHHHHH-HHHHhhccHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------HH
Confidence            999886653  799999999999 999999999999999999999999999999999974                  78


Q ss_pred             HHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCcccCCccce
Q 009821          372 EAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGDFRGNNFNY  451 (524)
Q Consensus       372 ~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~~~~~~~~  451 (524)
                      ++||+|+||++|+++..++|.+.+|++++|+.||||+.|.++.+++||||++|+||++||||||..           ..+
T Consensus       287 ~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~p~R~~~-----------~~~  355 (416)
T 3p3o_A          287 PQAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRFDITVKRE-----------APS  355 (416)
T ss_dssp             HHHHHHHHHHSCSCSSCCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCTTCCCS-----------SCC
T ss_pred             HHHHHHHHhhccccccCcceEeCCCeEECCEEECCCCEEEEChHHhcCChhccCCccccCCCCCCC-----------CCe
Confidence            999999999999996668999999999999999999999999999999999999999999999742           258


Q ss_pred             eecCCCCCCCCCHHHHHHHHHHHHHHHhhhce-eeCCCCCCCCcccccccccccCCCceeeeec
Q 009821          452 LPFGSGRRICPGIPLAEKIVPHVLANLLHLFE-WSLPEGTKFDLSDKLLMALKKSEPLVVIPTP  514 (524)
Q Consensus       452 ~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  514 (524)
                      +|||+|+|.|+|++||++|++++++.|+++|+ +++..+.  ++..  .........++|++.|
T Consensus       356 l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~--~~~~--~~~~~g~~~lpv~~~p  415 (416)
T 3p3o_A          356 IAFGGGPHFCLGTALARLELTEAVAALATRLDPPQIAGEI--TWRH--ELGVAGPDALPLRFGA  415 (416)
T ss_dssp             CTTCCSTTSCTTHHHHHHHHHHHHHHHHHHSCCEEECSCC--EECC--CTTCCCEEECEEEESC
T ss_pred             ecCCCCCccCcCHHHHHHHHHHHHHHHHHhCCccccCCCC--ceec--CCCccCcceeeEEEec
Confidence            99999999999999999999999999999995 8876542  2222  2223333446666543


No 75 
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=100.00  E-value=1.7e-52  Score=405.96  Aligned_cols=384  Identities=17%  Similarity=0.196  Sum_probs=279.3

Q ss_pred             CCCCceecc-cc--cCCCChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCcccc---hhhhc
Q 009821           58 PRALPLVGN-IL--SAEPNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAA---ASVLT  131 (524)
Q Consensus        58 p~~~p~iG~-~~--~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~---~~~~~  131 (524)
                      +.++|.+|- .+  .+..|++.+|.+++ ++|||++  .++...++|++++.++++++++.. |+.......   .....
T Consensus        17 ~~~~P~~~~dp~~~~~~~dP~~~~~~lR-~~gPV~~--~~~~~~~~vt~~~~v~~vl~d~~~-fs~~~~~~~~~~~~~~~   92 (412)
T 4dnj_A           17 GAGVPHLGIDPFALDYFADPYPEQETLR-EAGPVVY--LDKWNVYGVARYAEVYAVLNDPLT-FCSSRGVGLSDFKKEKP   92 (412)
T ss_dssp             STTSCEECCCTTSHHHHHSCHHHHHHHH-HHCSSEE--ETTTTEEEECSHHHHHHHHTCTTT-EESTTCSSSSCTTTSCC
T ss_pred             CCCCCccCCCCCCHHHHhCcHHHHHHHH-hcCCEEE--ECCCCEEEECCHHHHHHHHcCCcc-ccCCCcccccccccccc
Confidence            345788772 22  23457888998885 5799985  455568899999999999987664 433221111   11111


Q ss_pred             -cCCccc--ccCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceeh-hHHHHHHHHHHHHHHHhcc
Q 009821          132 -YGGKSI--GASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKV-GELMFLTSLDVATRMLWGA  207 (524)
Q Consensus       132 -~~~~~~--~~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~-~~~~~~~~~dvi~~~~fG~  207 (524)
                       ..+..+  .+|+.|+++|+.+. +.|+.+.++.+.+.+.+.++++++.+.. .++.+|+ .++...+++++++.++ |.
T Consensus        93 ~~~~~~~~~~Dg~~H~r~R~~~~-~~Fs~~~l~~~~~~i~~~~~~l~~~~~~-~~~~~D~v~~~~~~~~~~~i~~l~-g~  169 (412)
T 4dnj_A           93 WRPPSLILEADPPAHTRTRAVLS-KVLSPATMKRLRDGFAAAADAKIDELLA-RGGNIDAIADLAEAYPLSVFPDAM-GL  169 (412)
T ss_dssp             SSCCCTTTTCCTTHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHHHHHHHH-TTSEEETCCCCCCHHHHHHHHHHH-TC
T ss_pred             ccCCCccccCChHHHHHHHhhcc-cccCHHHHHHhhHHHHHHHHHHHHhhhc-cCCCceeHHHHHhhhhHhHHHHHc-CC
Confidence             111222  28999999999987 8999999999999999999999999876 3456774 5677788889888765 44


Q ss_pred             CCCCCCchHHHHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcc
Q 009821          208 SLRGEDWDAVAIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSSK  287 (524)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~  287 (524)
                      ...+..      .+......+.......              ....+........+..+..+.+++.+..         .
T Consensus       170 ~~~~~~------~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~  220 (412)
T 4dnj_A          170 KQEGRE------NLLPYAGLVFNAFGPP--------------NELRQSAIERSAPHQAYVAEQCQRPNLA---------P  220 (412)
T ss_dssp             CSTTGG------GHHHHHHHHHHHTSCS--------------SHHHHHHHHTCHHHHHHHHHHTSGGGSC---------T
T ss_pred             chhhhh------hhhhhhhccccccccc--------------HHHHHHHHHHHHHHHHHHHHHHHhhccc---------c
Confidence            333222      1222222222221110              0111222333334444444444333221         2


Q ss_pred             cHHHHHHHHhhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcccccccCC
Q 009821          288 DFLQTLLELQQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAK  367 (524)
Q Consensus       288 d~l~~ll~~~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~~l~~  367 (524)
                      |.+..++....+ +..++++|+.+++. .+++||+|||+++++|++++|++||++|+|||+|.                 
T Consensus       221 ~~~~~l~~~~~~-~~~l~~~e~~~~~~-~l~~AG~eTTa~~l~~~~~~L~~~P~~~~~Lr~~~-----------------  281 (412)
T 4dnj_A          221 GGFGACIHAFSD-TGEITPEEAPLLVR-SLLSAGLDTTVNGIAAAVYCLARFPDEFARLRADP-----------------  281 (412)
T ss_dssp             TSHHHHHHHTTT-TTSSCTTHHHHHHH-HHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHHHCG-----------------
T ss_pred             ccchhhhHhhhh-ccchhHHHHHHHHH-HHHhccchhHHHHHHHHHHHHhhCHHHHHHHHhCc-----------------
Confidence            344555554433 45689999999998 99999999999999999999999999999999863                 


Q ss_pred             ChhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCcccCC
Q 009821          368 LPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGDFRGN  447 (524)
Q Consensus       368 lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~~~~  447 (524)
                       .|+.++++|++|++|+++. +.|.+.+|++++|+.||+|+.|.++.+++||||++|+||++||||||.           
T Consensus       282 -~~~~~~~eE~lR~~pp~~~-~~R~a~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~f~dP~~F~PeR~~-----------  348 (412)
T 4dnj_A          282 -SLARNAFEEAVRFESPVQT-FFRTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWDDPDRYDITRKT-----------  348 (412)
T ss_dssp             -GGHHHHHHHHHHHHCSBCE-EEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCC-----------
T ss_pred             -cccccccceeeeecCCccc-ccccCCCCeEECCccCCCCCeEEeehhhccCChhhCCCccccCCCCCC-----------
Confidence             3788999999999999998 689999999999999999999999999999999999999999999974           


Q ss_pred             ccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhc-eeeCCCCCCCCcccccccccccCCCceeeeec
Q 009821          448 NFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLF-EWSLPEGTKFDLSDKLLMALKKSEPLVVIPTP  514 (524)
Q Consensus       448 ~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  514 (524)
                       ..|+|||+|+|.|+|++||++|++++++.|+++| ++++++.  .++.  .+.+......++|+++|
T Consensus       349 -~~~lpFG~G~r~CiG~~lA~~E~~~~l~~Ll~rf~~~~l~~~--~~~~--~~~~~rg~~~LpV~~tP  411 (412)
T 4dnj_A          349 -SGHVGFGSGVHMCVGQLVARLEGEVVLAALARKVAAIEIAGP--LKRR--FNNTLRGLESLPIQLTP  411 (412)
T ss_dssp             -TTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEEEECSC--CEEE--ECSSBEEEEECEEEEEE
T ss_pred             -CCCCCcCCCCcCChhHHHHHHHHHHHHHHHHHHCCCCeECCC--Ceee--cCCCccCCcceeEEEEe
Confidence             2489999999999999999999999999999999 8998753  2222  23444444567787765


No 76 
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=100.00  E-value=1.4e-47  Score=370.48  Aligned_cols=352  Identities=14%  Similarity=0.163  Sum_probs=262.9

Q ss_pred             CChhHHHHHHHHHhC-CeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCcccchhhh-ccCCccc-ccCCchHHHHH
Q 009821           72 PNLHRYFTKLSQIYG-PIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSAAASVL-TYGGKSI-GASPEWPKLRQ  148 (524)
Q Consensus        72 ~~~~~~~~~~~~kyG-~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~w~~~R~  148 (524)
                      .+++..+.++++..+ +++..-.++ ...+|+.++.++++++++.. |++.......... ......+ .++++|+++|+
T Consensus        37 ~~~~~~~~~lr~~~~~~~~~~~~~g-g~W~vtr~~dv~~vl~d~~~-fs~~~~~~~~~~~~~~~~~~~~~D~p~H~r~Rr  114 (417)
T 4dxy_A           37 DGYHEAWKKVQHPGIPDLIWTPFTG-GHWIATNGDTVKEVYSDPTR-FSSEVIFLPKEAGEKAQMVPTKMDPPEHTPYRK  114 (417)
T ss_dssp             GCHHHHHHHHSCTTCCSEEEESSTT-SEEEECSHHHHHHHHTCTTT-EESSCCSSSTTSSCSSCTTTTTCCTTTHHHHHH
T ss_pred             cChHHHHHHHHhhCCCCEEecCCCC-CEEEECCHHHHHHHHcCchh-ccCCCcccccccccccccCcccCCcHHHHHHHH
Confidence            467788888866544 344332333 46789999999999987653 5544322111111 1111112 28999999999


Q ss_pred             HHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehh-HHHHHHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHH
Q 009821          149 VLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVG-ELMFLTSLDVATRMLWGASLRGEDWDAVAIQFREVLEE  227 (524)
Q Consensus       149 ~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~-~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~  227 (524)
                      .+. +.|+++.++.+.+.+++.++++++.+..  ++.+|+. ++...+.+.+++.+ +|....+      ...+......
T Consensus       115 ll~-~~Fs~~~l~~~~~~i~~~~~~lld~l~~--~g~~D~v~~~a~~l~~~vi~~l-lg~~~~d------~~~~~~~~~~  184 (417)
T 4dxy_A          115 ALD-KGLNLAKIRKVEDKVREVASSLIDSFAA--RGECDFAAEYAELFPVHVFMAL-ADLPLED------IPVLSEYARQ  184 (417)
T ss_dssp             HHH-HHHCHHHHHTTHHHHHHHHHHHHHHHHT--TSEEEHHHHTTTTHHHHHHHHH-TTCCGGG------HHHHHHHHHH
T ss_pred             Hhh-hhcCHHHHHHHHHHHHHHHHHHHHHhhh--cCCeeeHHHHHhhhHHHHHHHH-cCCCHHH------HHHHHhhhhh
Confidence            997 8999999999999999999999999876  5578854 44556667777654 5764322      1233333332


Q ss_pred             HHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCcccHHHHHHHHhhcCCCCCcHH
Q 009821          228 MFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSGQDMNEGKSSKDFLQTLLELQQQGDYSLSMD  307 (524)
Q Consensus       228 ~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~l~~~  307 (524)
                      +..    ..         ...............+.+..++.+.++++++.       ..+|+++.|+.... ++..++++
T Consensus       185 ~~~----~~---------~~~~~~~~~~~~~~~~~~~~~~~~li~~rr~~-------~~ddl~s~L~~~~~-~~~~~~~~  243 (417)
T 4dxy_A          185 MTR----PE---------GNTPEEMATDLEAGNNGFYAYVDPIIRARVGG-------DGDDLITLMVNSEI-NGERIAHD  243 (417)
T ss_dssp             HHS----CC---------CSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-------CCCSHHHHHHTCEE-TTEECCHH
T ss_pred             hcc----cc---------ccChHHHHHHHHHHHHHHHHHHHHHHHHHhcC-------Cccchhhhhccccc-cCCccchh
Confidence            221    00         00011223455667778888888888877643       24689999987654 34578999


Q ss_pred             HHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCCCcccccccCCChhHHHHHHhhhcCCCCCCC
Q 009821          308 QIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARDSVVEEFHLAKLPYLEAIVKETLRLHPPAPL  387 (524)
Q Consensus       308 ~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~  387 (524)
                      ++.+++. .+++||+|||+++++|++++|++||++|+++++|...+.                  .+ .|.+|++++++.
T Consensus       244 e~~~~~~-~ll~AG~eTTa~~l~~~~~~L~~~P~~~~~l~~e~~~~~------------------~a-vee~~~~~~~~~  303 (417)
T 4dxy_A          244 KAQGLIS-LLLLGGLDTVVNFLSFFMIHLARHPELVAELRSDPLKLM------------------RG-AEEMFRRFPVVS  303 (417)
T ss_dssp             HHHHHHH-HHHHHTTHHHHHHHHHHHHHHHTCHHHHHHHHHCHHHHH------------------HT-HHHHHHHSCCBE
T ss_pred             HHHHHHH-HHHhhcccchhhHHHHHHHHHHhCchhhhhhccCccccc------------------cc-eeeeeccccccc
Confidence            9999998 999999999999999999999999999999999976542                  22 344444455554


Q ss_pred             cCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccCCCcccCCccceeecCCCCCCCCCHHHH
Q 009821          388 LTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLEDVKIGDFRGNNFNYLPFGSGRRICPGIPLA  467 (524)
Q Consensus       388 ~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A  467 (524)
                       +.|.+++|++++|+.||+|+.|.++.+++||||++|+||++|||||+            +..++|||+|+|.|+|++||
T Consensus       304 -~~R~a~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~f~dP~~FdpeR~------------~~~~l~FG~G~r~ClG~~LA  370 (417)
T 4dxy_A          304 -EARMVAKDQEYKGVFLKRGDMILLPTALHGLDDAANPEPWKLDFSRR------------SISHSTFGGGPHRCAGMHLA  370 (417)
T ss_dssp             -EEEEECSCEEETTEEECTTCEEEEETHHHHTCTTTSSSTTSCCTTCS------------CCCCCTTCCGGGSCTTHHHH
T ss_pred             -cccccccceEecCccccCCCEEEEeehhhcCChhhCCCccccCCCCC------------CCCCCCcCCCcccCccHHHH
Confidence             67999999999999999999999999999999999999999999993            13589999999999999999


Q ss_pred             HHHHHHHHHHHhhhc-eeeCCCC
Q 009821          468 EKIVPHVLANLLHLF-EWSLPEG  489 (524)
Q Consensus       468 ~~e~~~~l~~ll~~f-~~~~~~~  489 (524)
                      ++|++++++.|+++| +++++++
T Consensus       371 ~~E~~i~l~~Ll~rfp~~~l~~~  393 (417)
T 4dxy_A          371 RMEVIVTLEEWLKRIPEFSFKEG  393 (417)
T ss_dssp             HHHHHHHHHHHHHHCSSCEECTT
T ss_pred             HHHHHHHHHHHHHhCCCceeCCC
Confidence            999999999999999 8999876


No 77 
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00  E-value=5.5e-47  Score=357.59  Aligned_cols=310  Identities=15%  Similarity=0.152  Sum_probs=211.6

Q ss_pred             CCCC-CCCCceeccccc-----CCCChhHHHHHHHHHhCCeEEEecCCeeEEEeCCHHHHHHHHHhccccccCCCccc-c
Q 009821           54 LPPG-PRALPLVGNILS-----AEPNLHRYFTKLSQIYGPIFKFYLGRKLCIVIGSPSLAKQVLKEHDVVFANRDPSA-A  126 (524)
Q Consensus        54 ~ppg-p~~~p~iG~~~~-----~~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~~~~~~~~-~  126 (524)
                      +||| +.++|++|+.+.     +..+++.++.+++++  ||++..   ...+++++++.++++++++  .|+++.... .
T Consensus        35 ~ppG~~~~~P~~G~~~~~~~~~~~~dp~~~~~~lr~~--pV~~~~---~~~~vv~~~~~v~~vl~d~--~f~~~~~~~~~  107 (381)
T 2yjn_B           35 MIRGLHWGYGSNGDPYPMLLCGHDDDPQRRYRSMRES--GVRRSR---TETWVVADHATARQVLDDP--AFTRATGRTPE  107 (381)
T ss_dssp             HHHHHHHHHHHHTCHHHHHHHTCCSCCHHHHHHHHHH--CEEECS---SSCEEECSHHHHHHHHHCS--SEESSCCCCCH
T ss_pred             CCCcccccccccCCchhhcCchhccCchHHHHHHHhC--CceeCC---CCEEEEcCHHHHHHHHcCC--CcCCCcccccc
Confidence            3566 336799997643     456889999999865  998764   3579999999999999874  365543211 0


Q ss_pred             h------hhhccCCcccc--cCCchHHHHHHHHHhhcCcchhhhcHHHHHHHHHHHHHHHhccCCCceehhHHH-HHHHH
Q 009821          127 A------SVLTYGGKSIG--ASPEWPKLRQVLVRETMSNTSLNSSSAIRRQAVLRSMKDVSGRVGSPIKVGELM-FLTSL  197 (524)
Q Consensus       127 ~------~~~~~~~~~~~--~~~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~vd~~~~~-~~~~~  197 (524)
                      .      ..... +.++.  +++.|       . +.|+     . .+.+++.++++++.+.    +++|+...+ ..+++
T Consensus       108 ~~~~~~~~~~~~-~~~l~~~dg~~H-------~-~~Ft-----~-~~~i~~~~~~ll~~~~----g~~Dl~~~~a~~l~~  168 (381)
T 2yjn_B          108 WMRAAGAPPAEW-AQPFRDVHAASW-------E-GEVP-----D-VGELAESFAGLLPGAG----ARLDLVGDFAWQVPV  168 (381)
T ss_dssp             HHHHHTCCHHHH-THHHHHHHHCCC-------C-SCCC-----C-CSCHHHHTSTTSCC----------CCCCCCTHHHH
T ss_pred             cccccccccchh-hhhhhhCCchhh-------h-hccC-----C-hHHHHHHHHHHHHhcc----CcchHHHHHHHHHHH
Confidence            0      00011 12222  78888       2 6677     2 5667777777777664    468888554 79999


Q ss_pred             HHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHhcCCCcccccccccccCccchHHHHHHHHHHHHHHHHHhhccccCC
Q 009821          198 DVATRMLWGASLRGEDWDAVAIQFREVLEEMFQVLGSGNISDLFPLLTRFDLQGLESKAKKLTVRLDKIFESLLRPGQSG  277 (524)
Q Consensus       198 dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~  277 (524)
                      ++|+++ ||.+.++.       .+...+......          +    ..... .++.       .+.+.         
T Consensus       169 ~vi~~l-~G~~~~~~-------~~~~~~~~~~~~----------~----~~~~~-~~~~-------~~~~~---------  209 (381)
T 2yjn_B          169 QGMTAV-LGAAGVLR-------GAAWDARVSLDA----------Q----LSPQQ-LAVT-------EAAVA---------  209 (381)
T ss_dssp             HHHHTC------CCH-------HHHHHHTTHHHH----------T----TSCCC-HHHH-------HHHHH---------
T ss_pred             HHHHHH-cCCCHHHH-------HHHHHHHHhccC----------C----CCHHH-HHHH-------HHHHH---------
Confidence            999995 99876432       121111110000          0    00000 0000       00000         


Q ss_pred             CCCCCCCCcccHHHHHHHHhhcCCCCCcHHHHHHHHHhhhhcccccchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhcCC
Q 009821          278 QDMNEGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMVDVAIGSTDTTSITVEWAMSELLQKPEVMRKARNELEQVVARD  357 (524)
Q Consensus       278 ~~~~~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~l~~~~ag~~tts~~l~~~l~~L~~~pe~~~klr~Ei~~~~~~~  357 (524)
                                    .++           +    ++++ .+++||+|||+++++|++++|++||++|+++++|++      
T Consensus       210 --------------~l~-----------~----~~~~-~ll~aG~eTt~~~l~~~l~~L~~~P~~~~~l~~e~~------  253 (381)
T 2yjn_B          210 --------------ALP-----------A----DPAL-RALFAGAEMTANTVVDAVLAVSAEPGLAERIADDPA------  253 (381)
T ss_dssp             --------------HCC-----------------CHH-HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCC------
T ss_pred             --------------HHH-----------H----HHHH-HHHHHhhhHHHHHHHHHHHHHHHCHHHHHHHhhCHH------
Confidence                          000           0    4455 889999999999999999999999999999999864      


Q ss_pred             CcccccccCCChhHHHHHHhhhcCCCCCCCcCccccCCCccccceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCcccc
Q 009821          358 SVVEEFHLAKLPYLEAIVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLE  437 (524)
Q Consensus       358 ~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~~~~~~g~~ip~G~~v~~~~~~~h~d~~~~~dp~~F~PeR~~~  437 (524)
                                  |+++||+|+||++|+++. +.|.+.+|++++|+.||||+.|.++.+++||||++|+||++|||+||.+
T Consensus       254 ------------~l~~~i~E~LR~~pp~~~-~~R~a~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~~~dp~~F~p~R~~~  320 (381)
T 2yjn_B          254 ------------AAQRTVAEVLRLHPALHL-ERRTATAEVRLGEHVIGEGEEVVVVVAAANRDPEVFAEPDRLDVDRPDA  320 (381)
T ss_dssp             --------------HHHHHHHHHHSCSCSE-EEEEESSCEESSSCEECTTCEEEEEHHHHTTCTTTSSSTTSCCSSCSCC
T ss_pred             ------------HHHHHhCeeeeecCCCcc-eeEEECCCeEECCEEECCCCEEEeCHHHHcCCcccCCCccccCCCCCCC
Confidence                        899999999999999997 6899999999999999999999999999999999999999999999973


Q ss_pred             ccCCCcccCCccceeecCCCCCCCCCHHHHHHHHHHHHHHHhhhc-eeeCCCC
Q 009821          438 DVKIGDFRGNNFNYLPFGSGRRICPGIPLAEKIVPHVLANLLHLF-EWSLPEG  489 (524)
Q Consensus       438 ~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~  489 (524)
                                 ..++|||+| |.|+|++||++|++++++.|+++| +++++++
T Consensus       321 -----------~~~l~FG~G-h~C~G~~lA~~e~~~~l~~ll~~~p~~~l~~~  361 (381)
T 2yjn_B          321 -----------DRALSAHRG-HPGRLEELVTALATAALRAAAKALPGLTPSGP  361 (381)
T ss_dssp             -----------CCCCC-----CCSSHHHHHHHHHHHHHHHTTTTCCC-----C
T ss_pred             -----------CCccCCCCC-CCCchHHHHHHHHHHHHHHHHHhCCCcEECCC
Confidence                       359999999 999999999999999999999999 9998765


No 78 
>1m46_B IQ4, IQ4 motif from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle protein; 2.10A {Saccharomyces cerevisiae}
Probab=37.54  E-value=28  Score=16.72  Aligned_cols=12  Identities=42%  Similarity=0.661  Sum_probs=9.9

Q ss_pred             HHHHHHHHHHHH
Q 009821          341 EVMRKARNELEQ  352 (524)
Q Consensus       341 e~~~klr~Ei~~  352 (524)
                      .+|.|+|.|+.+
T Consensus         8 nlqkkirkelkq   19 (26)
T 1m46_B            8 NLQKKIRKELKQ   19 (26)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            578999999864


No 79 
>2diu_A KIAA0430 protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=36.03  E-value=51  Score=23.29  Aligned_cols=61  Identities=13%  Similarity=0.123  Sum_probs=42.0

Q ss_pred             ceecccccCCC--ChhHHHHHHHHHhC-CeEEEecCCeeEEEeCCHHHHHHHHHh-ccccccCCCc
Q 009821           62 PLVGNILSAEP--NLHRYFTKLSQIYG-PIFKFYLGRKLCIVIGSPSLAKQVLKE-HDVVFANRDP  123 (524)
Q Consensus        62 p~iG~~~~~~~--~~~~~~~~~~~kyG-~i~~~~~g~~~~vvv~dp~~i~~il~~-~~~~~~~~~~  123 (524)
                      -+++|+-.-..  +....+.++..+|| +|..+ .+|.-+|...+.+.++..++. +...+-.++.
T Consensus        12 lYV~NL~~~~~~~~lk~~L~~lF~~yGG~Vl~V-tgG~AfV~F~~~esA~~A~~~l~G~~l~gr~i   76 (96)
T 2diu_A           12 LYVYNLPANKDGKSVSNRLRRLSDNCGGKVLSI-TGCSAILRFINQDSAERAQKRMENEDVFGNRI   76 (96)
T ss_dssp             EEEESCCTTSCHHHHHHHHHHHHHTTTCCEEEC-CTTCEEEEESSHHHHHHHHHHHTTCCSSSSCC
T ss_pred             EEEeCCCCcCCHHHHHHHHHHHHHHcCCeeEEE-ecCEEEEEECCHHHHHHHHHHhcCCccCCceE
Confidence            45888765422  22345778889995 99888 568888999999999888754 4434445444


No 80 
>1s79_A Lupus LA protein; RRM, alpha/beta, RNA binding protein, translation; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=31.07  E-value=1.4e+02  Score=21.10  Aligned_cols=59  Identities=8%  Similarity=0.105  Sum_probs=38.7

Q ss_pred             CceecccccCCCChhHHHHHHHHHhCCeEEEecC--------CeeEEEeCCHHHHHHHHHhccccccCC
Q 009821           61 LPLVGNILSAEPNLHRYFTKLSQIYGPIFKFYLG--------RKLCIVIGSPSLAKQVLKEHDVVFANR  121 (524)
Q Consensus        61 ~p~iG~~~~~~~~~~~~~~~~~~kyG~i~~~~~g--------~~~~vvv~dp~~i~~il~~~~~~~~~~  121 (524)
                      .-++|++..-  -....+.+...+||+|..+.+.        |--.|...+++.++.++..+...+..+
T Consensus        13 ~lfV~~Lp~~--~te~~L~~~F~~~G~v~~v~i~~d~~g~~rG~aFV~F~~~e~a~~Ai~~~~~~~~gr   79 (103)
T 1s79_A           13 SVYIKGFPTD--ATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVETPGQKYKET   79 (103)
T ss_dssp             CEEEECCCTT--CCHHHHHHHHHTSSCEEEEEEECCCTTSCCCEEEEEESSHHHHHHHHTSSCCCCTTT
T ss_pred             EEEEECCCCC--CCHHHHHHHHhhcCCEEEEEEEECCCCCCccEEEEEECCHHHHHHHHHcCCCEECCE
Confidence            3456666542  2356678888999999877653        334567789999999887544334333


No 81 
>2krb_A Eukaryotic translation initiation factor 3 subunit B; EIF3, eukaryotic initiation factor, EIF3B, EIF3J; NMR {Homo sapiens}
Probab=31.03  E-value=1.1e+02  Score=20.07  Aligned_cols=51  Identities=22%  Similarity=0.354  Sum_probs=35.0

Q ss_pred             eecccccCCCC----hhHHHHHHHHHhCCeEEEecC-------CeeEEEeCCHHHHHHHHHh
Q 009821           63 LVGNILSAEPN----LHRYFTKLSQIYGPIFKFYLG-------RKLCIVIGSPSLAKQVLKE  113 (524)
Q Consensus        63 ~iG~~~~~~~~----~~~~~~~~~~kyG~i~~~~~g-------~~~~vvv~dp~~i~~il~~  113 (524)
                      ++|++..-..+    ..+.+.+...+||+|..+.+.       |--.|-..+++.++..+..
T Consensus         5 ~V~nLp~~~~~~~~~t~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~Ai~~   66 (81)
T 2krb_A            5 VVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKN   66 (81)
T ss_dssp             EEESCCCCCTTTHHHHHHHHHHHHHTTCCEEEEECCCBTTBCCCEEEEEESSHHHHHHHHTT
T ss_pred             EEeCCCCCcHHHHHHHHHHHHHHHhhcCCeEEEEecCCCCcEeEEEEEEECCHHHHHHHHHH
Confidence            45666432222    347788888999999888765       3345667889988888764


No 82 
>2nlw_A Eukaryotic translation initiation factor 3 subunit 9; eukaryotic initiation factor 3 complex, RNA recognition motif; NMR {Homo sapiens}
Probab=29.93  E-value=1.5e+02  Score=20.93  Aligned_cols=62  Identities=18%  Similarity=0.292  Sum_probs=41.6

Q ss_pred             CCCceecccccCCCC----hhHHHHHHHHHhCCeEEEecC-------CeeEEEeCCHHHHHHHHHh-ccccccC
Q 009821           59 RALPLVGNILSAEPN----LHRYFTKLSQIYGPIFKFYLG-------RKLCIVIGSPSLAKQVLKE-HDVVFAN  120 (524)
Q Consensus        59 ~~~p~iG~~~~~~~~----~~~~~~~~~~kyG~i~~~~~g-------~~~~vvv~dp~~i~~il~~-~~~~~~~  120 (524)
                      ...-++|++..-..+    ....+.+...+||+|..+.+.       |--.|-..+++.++..+.. ++..+..
T Consensus        15 ~~~l~V~nLp~~~~~~~~~t~~~l~~~F~~~G~v~~v~i~~~~g~~~G~afV~f~~~~~A~~Ai~~l~g~~~~g   88 (105)
T 2nlw_A           15 DSVIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKNADGYKLDK   88 (105)
T ss_dssp             CSEEEEESCCCCCTTTTTHHHHHHHHHHGGGSCEEEEECCCBTTBSCCEEEEEECSSSHHHHHHHHCSSEECST
T ss_pred             CCEEEEeCCCcchhhhhHHHHHHHHHHHhcCCCEEEEEeeCCCCCeeeEEEEEECCHHHHHHHHHHhCCcccCC
Confidence            345677887653322    457788889999999888765       3345667888888888764 4433433


No 83 
>3ijw_A Aminoglycoside N3-acetyltransferase; anthrax, COA, acyltransferase, structural genom center for structural genomics of infectious diseases; HET: MSE ACO; 1.90A {Bacillus anthracis} SCOP: c.140.1.0 PDB: 3slf_A* 3n0s_A* 3slb_A* 3n0m_A* 3kzl_A* 3e4f_A*
Probab=21.69  E-value=42  Score=29.15  Aligned_cols=23  Identities=22%  Similarity=0.508  Sum_probs=18.3

Q ss_pred             CCCCEEEeehhhhccCCCCCCCC
Q 009821          405 PKGSTIFINAWAIQRNPEVWENP  427 (524)
Q Consensus       405 p~G~~v~~~~~~~h~d~~~~~dp  427 (524)
                      |.||+|+.....-+.||+.|.+|
T Consensus        64 ~~GTLvmPt~t~~~~dp~~w~~p   86 (268)
T 3ijw_A           64 EEGTIIMPTQSSDLSDPKHWSRP   86 (268)
T ss_dssp             TTSEEEEECCCGGGSCGGGCCSS
T ss_pred             CCCeEEEeccccccCChhhhcCC
Confidence            67888887777778899999766


No 84 
>1iqt_A AUF1, heterogeneous nuclear ribonucleoprotein D0; RNA-binding protein, hnRNP, telomere, DNA-binding protein, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wtb_A 1x0f_A
Probab=21.06  E-value=1.7e+02  Score=18.65  Aligned_cols=44  Identities=9%  Similarity=0.042  Sum_probs=31.0

Q ss_pred             hHHHHHHHHHhCCeEEEecC---------CeeEEEeCCHHHHHHHHHhccccc
Q 009821           75 HRYFTKLSQIYGPIFKFYLG---------RKLCIVIGSPSLAKQVLKEHDVVF  118 (524)
Q Consensus        75 ~~~~~~~~~kyG~i~~~~~g---------~~~~vvv~dp~~i~~il~~~~~~~  118 (524)
                      .+.+.+...+||+|..+.+.         +--.|-..+++.++..+......+
T Consensus        13 ~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~Ai~~~~~~~   65 (75)
T 1iqt_A           13 EEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNV   65 (75)
T ss_dssp             HHHHHHHHHHHSCCSEECCCCSCCCSSSCCCEEEECSSSHHHHHHHTTSSCCB
T ss_pred             HHHHHHHHHhcCCeEEEEEEecCCCCCcCCEEEEEECCHHHHHHHHHhCCCeE
Confidence            56678888999998877653         233566788888888887544333


Done!