Query 009822
Match_columns 524
No_of_seqs 333 out of 2188
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 13:46:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009822.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009822hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ep6_A MCTP2 protein; beta san 99.8 1.2E-19 4.3E-24 158.8 14.8 120 8-127 7-132 (133)
2 3kwu_A MUNC13-1; calcium bindi 99.8 1.1E-18 3.6E-23 155.7 17.8 117 10-126 13-146 (148)
3 2fk9_A Protein kinase C, ETA t 99.8 7.1E-19 2.4E-23 157.8 13.3 113 11-125 26-155 (157)
4 2dmh_A Myoferlin; beta-sandwic 99.8 2.9E-18 1E-22 151.3 16.4 118 11-129 4-135 (140)
5 1wfj_A Putative elicitor-respo 99.8 1.2E-18 4E-23 153.1 13.7 120 9-128 5-131 (136)
6 3b7y_A E3 ubiquitin-protein li 99.8 3.2E-18 1.1E-22 153.5 16.4 119 8-126 14-152 (153)
7 3m7f_B E3 ubiquitin-protein li 99.8 6.6E-18 2.3E-22 155.2 16.2 120 9-128 3-142 (176)
8 1gmi_A Protein kinase C, epsil 99.8 2.8E-18 9.7E-23 150.8 12.3 114 12-127 4-133 (136)
9 1rlw_A Phospholipase A2, CALB 99.7 1.3E-17 4.4E-22 144.4 13.9 111 13-125 2-121 (126)
10 3pyc_A E3 ubiquitin-protein li 99.7 2.6E-17 8.9E-22 143.8 15.0 111 13-124 4-130 (132)
11 2b3r_A Phosphatidylinositol-4- 99.7 4.2E-17 1.4E-21 142.9 13.5 103 12-115 18-131 (134)
12 2z0u_A WW domain-containing pr 99.7 1.8E-17 6.2E-22 148.9 10.6 104 11-114 40-155 (155)
13 2nq3_A Itchy homolog E3 ubiqui 99.7 9.4E-17 3.2E-21 146.9 14.2 117 11-128 33-162 (173)
14 3f04_A Synaptotagmin-1; C2A, c 99.7 4.4E-17 1.5E-21 144.3 11.1 104 11-114 31-142 (143)
15 1rsy_A Synaptotagmin I; calciu 99.7 8.3E-17 2.8E-21 144.2 12.6 104 11-114 39-150 (152)
16 2d8k_A Synaptotagmin VII; exoc 99.7 1.1E-16 3.8E-21 141.4 13.3 105 11-115 23-136 (141)
17 2bwq_A Regulating synaptic mem 99.7 6.2E-17 2.1E-21 140.7 11.4 103 11-113 15-129 (129)
18 3fdw_A Synaptotagmin-like prot 99.7 3E-17 1E-21 146.3 9.4 106 11-116 20-136 (148)
19 3rdl_A Protein kinase C alpha 99.7 7.3E-17 2.5E-21 141.7 11.2 103 12-114 14-124 (137)
20 1a25_A CALB, protein kinase C 99.7 9.4E-17 3.2E-21 143.3 11.7 102 13-114 30-139 (149)
21 1rh8_A Piccolo protein; beta-s 99.7 3.4E-17 1.2E-21 144.8 8.0 105 13-117 17-141 (142)
22 3fbk_A RGS3, RGP3, regulator o 99.7 1.6E-16 5.6E-21 142.4 11.6 105 11-116 24-139 (153)
23 2q3x_A Regulating synaptic mem 99.7 1.2E-16 4E-21 146.1 10.6 104 13-116 29-141 (171)
24 1v27_A Regulating synaptic mem 99.7 1.2E-16 4.2E-21 140.9 10.3 105 11-115 18-134 (141)
25 1wfm_A Synaptotagmin XIII; C2 99.7 4.3E-16 1.5E-20 137.2 13.0 101 12-115 24-133 (138)
26 1ugk_A Synaptotagmin IV, KIAA1 99.7 3.8E-16 1.3E-20 137.4 12.4 105 11-115 19-134 (138)
27 2dmg_A KIAA1228 protein; beta- 99.7 1.5E-16 5.3E-21 140.6 9.1 106 11-117 21-138 (142)
28 2chd_A Rabphilin-3A, exophilin 99.7 3.2E-16 1.1E-20 138.6 11.1 104 11-114 26-140 (142)
29 3n5a_A Synaptotagmin-7; calciu 99.7 5.7E-17 1.9E-21 142.5 5.9 108 11-118 13-128 (138)
30 2cm5_A Rabphilin-3A; protein t 99.7 9.7E-17 3.3E-21 145.9 7.3 106 12-117 35-148 (166)
31 1tjx_A Similar to synaptotagmi 99.7 8.4E-16 2.9E-20 138.6 13.3 104 11-114 22-147 (159)
32 1w15_A Synaptotagmin IV; metal 99.6 1.6E-16 5.6E-21 142.3 7.6 107 11-117 27-141 (153)
33 2enp_A B/K protein; C2 type 1, 99.6 3.6E-16 1.2E-20 139.2 9.6 105 11-115 23-142 (147)
34 2r83_A Synaptotagmin-1; C2A-C2 99.6 2.3E-15 8E-20 148.8 16.5 147 11-169 16-178 (284)
35 1dqv_A Synaptotagmin III; beta 99.6 6.8E-15 2.3E-19 146.5 14.4 149 11-171 17-182 (296)
36 2cjt_A UNC-13 homolog A, MUNC1 99.6 2.4E-15 8.3E-20 131.0 7.8 85 12-102 3-88 (131)
37 3nsj_A Perforin-1; pore formin 99.6 2E-14 6.9E-19 153.1 15.8 113 12-129 392-506 (540)
38 3jzy_A Intersectin 2; C2 domai 99.6 2.1E-14 7.2E-19 153.8 14.9 116 11-126 384-507 (510)
39 2cjs_A UNC-13 homolog A, MUNC1 99.6 2E-14 6.9E-19 130.4 12.4 86 11-102 11-97 (167)
40 2r83_A Synaptotagmin-1; C2A-C2 99.5 3.1E-13 1.1E-17 133.5 13.6 103 12-114 148-272 (284)
41 3l9b_A Otoferlin; C2-domain, b 99.4 1E-12 3.4E-17 113.4 13.7 112 11-127 18-140 (144)
42 1cjy_A CPLA2, protein (cytosol 99.4 3.7E-13 1.3E-17 147.7 11.3 105 10-115 14-127 (749)
43 1djx_A PLC-D1, phosphoinositid 99.4 3E-12 1E-16 139.3 16.7 108 11-119 494-610 (624)
44 1dqv_A Synaptotagmin III; beta 99.4 8.5E-14 2.9E-18 138.5 1.2 102 12-113 150-260 (296)
45 3bxj_A RAS GTPase-activating p 99.3 2.9E-13 9.8E-18 143.5 -1.4 100 9-113 6-115 (483)
46 3pfq_A PKC-B, PKC-beta, protei 99.2 2.5E-11 8.6E-16 134.2 9.6 103 13-115 171-281 (674)
47 3qr0_A Phospholipase C-beta (P 99.0 7.2E-09 2.5E-13 115.0 15.8 98 13-119 649-757 (816)
48 3ohm_B 1-phosphatidylinositol- 98.9 8.8E-09 3E-13 114.9 14.5 98 12-118 723-830 (885)
49 2zkm_X 1-phosphatidylinositol- 98.9 1E-08 3.5E-13 114.3 15.0 99 11-118 675-784 (799)
50 1yrk_A NPKC-delta, protein kin 98.8 9.8E-08 3.4E-12 79.9 14.2 108 13-126 5-124 (126)
51 2enj_A NPKC-theta, protein kin 98.7 1.3E-07 4.3E-12 80.3 12.7 113 9-127 5-130 (138)
52 2hth_B Vacuolar protein sortin 95.4 0.12 4.1E-06 44.4 10.4 91 191-283 38-130 (140)
53 2cay_A VPS36 PH domain, vacuol 93.8 0.21 7.1E-06 43.2 8.1 84 190-284 50-135 (145)
54 1em2_A MLN64 protein; beta bar 93.2 0.76 2.6E-05 42.7 11.8 149 339-504 69-226 (229)
55 3p0l_A Steroidogenic acute reg 93.1 0.44 1.5E-05 44.1 9.8 146 340-502 59-213 (221)
56 2pcs_A Conserved protein; stru 93.0 2.2 7.7E-05 36.7 14.0 144 337-504 4-149 (162)
57 2ns9_A Hypothetical protein AP 91.5 5.2 0.00018 33.9 14.3 142 337-502 14-155 (157)
58 2r55_A STAR-related lipid tran 90.7 1.7 5.8E-05 40.3 11.0 150 339-505 70-230 (231)
59 1ln1_A PC-TP, phosphatidylchol 90.3 3.3 0.00011 37.6 12.4 149 339-504 55-210 (214)
60 3qsz_A STAR-related lipid tran 89.9 2.2 7.4E-05 38.1 10.6 143 339-496 30-176 (189)
61 2pso_A STAR-related lipid tran 88.9 1.2 3.9E-05 41.8 8.2 80 420-505 147-229 (237)
62 3l4c_A Dedicator of cytokinesi 88.7 12 0.0004 34.4 14.4 55 48-102 79-140 (220)
63 2wql_A Major allergen DAU C 1; 88.6 10 0.00034 32.8 13.4 144 340-503 8-153 (154)
64 1icx_A Protein LLR18A, LLPR10. 88.5 11 0.00039 32.3 14.8 147 339-505 6-153 (155)
65 1zsq_A Myotubularin-related pr 87.8 2.6 9E-05 44.1 10.7 74 170-243 8-88 (528)
66 1jss_A Stard4, cholesterol-reg 87.5 3.5 0.00012 38.0 10.5 146 339-502 70-222 (224)
67 1lw3_A Myotubularin-related pr 87.1 2.9 0.0001 44.8 10.7 75 169-243 79-160 (657)
68 2qim_A PR10.2B; trans-zeatin, 86.5 15 0.00052 31.6 15.8 147 339-505 7-155 (158)
69 2yf0_A Myotubularin-related pr 85.9 1.4 4.9E-05 45.9 7.4 52 189-243 23-74 (512)
70 1pfj_A TFIIH basal transcripti 85.3 3.4 0.00012 33.4 7.7 93 173-284 5-103 (108)
71 1t77_A Lipopolysaccharide-resp 84.2 1.6 5.5E-05 44.1 6.6 68 176-243 2-84 (414)
72 4a8u_A Major pollen allergen B 83.0 22 0.00076 30.7 17.0 149 339-506 6-156 (159)
73 1tw0_A Pathogenesis-related cl 82.6 23 0.00077 30.5 16.5 149 338-505 5-154 (157)
74 2vjg_A Major allergen DAU C 1; 81.5 25 0.00085 30.2 16.3 145 339-503 7-153 (154)
75 2e3n_A Lipid-transfer protein 80.4 9 0.00031 35.8 10.2 149 341-501 78-248 (255)
76 2wxf_A Phosphatidylinositol-4, 80.2 13 0.00044 41.9 12.6 87 13-102 216-324 (940)
77 2vq5_A S-norcoclaurine synthas 76.4 32 0.0011 31.1 12.0 147 338-506 31-181 (201)
78 3rws_A MTN13 protein; zeatin, 72.6 48 0.0016 28.9 16.0 148 338-507 11-163 (168)
79 1e09_A PRU AV 1; allergen, maj 72.3 46 0.0016 28.5 16.0 149 338-506 5-156 (159)
80 2flh_A Cytokinin-specific bind 72.2 46 0.0016 28.4 16.0 143 339-504 6-153 (155)
81 3p9v_A Uncharacterized protein 70.4 50 0.0017 28.1 14.5 138 341-503 12-151 (161)
82 2i9y_A Major latex protein-lik 69.0 57 0.0019 28.2 13.0 145 337-504 18-165 (166)
83 3hhm_A Phosphatidylinositol-4, 65.0 39 0.0013 38.5 11.7 87 14-102 355-455 (1091)
84 2yrb_A Protein fantom; beta sa 63.9 39 0.0013 29.1 9.1 105 11-117 15-134 (156)
85 3ggn_A Uncharacterized protein 59.6 78 0.0027 26.6 12.6 104 341-469 9-113 (155)
86 3fo5_A Thioesterase, adipose a 56.7 35 0.0012 32.0 8.3 116 339-468 91-216 (258)
87 1e7u_A Phosphatidylinositol 3- 56.5 76 0.0026 35.8 12.2 88 14-102 218-330 (961)
88 2y3a_A Phosphatidylinositol-4, 49.8 20 0.00067 41.0 6.1 69 13-84 352-430 (1092)
89 1zyi_A Methylosome subunit pic 48.9 37 0.0013 29.7 6.5 58 183-243 34-93 (171)
90 3f08_A Uncharacterized protein 44.0 1.4E+02 0.0048 24.9 15.3 131 340-503 6-138 (146)
91 1w7p_D VPS36P, YLR417W; ESCRT- 40.9 5.7 0.0002 41.8 0.0 41 191-231 43-83 (566)
92 3ie5_A Phenolic oxidative coup 35.6 2.1E+02 0.0073 24.5 15.4 148 337-506 11-162 (165)
93 3k3k_A Abscisic acid receptor 34.7 2.6E+02 0.0088 25.2 12.9 111 336-470 50-162 (211)
94 2d4r_A Hypothetical protein TT 32.4 1.8E+02 0.0063 22.9 16.3 80 416-504 66-145 (147)
95 2l9p_A Uncharacterized protein 31.0 2.3E+02 0.008 23.6 9.8 148 337-505 9-157 (164)
96 3kl1_A PYL2, putative uncharac 30.5 2.8E+02 0.0096 24.4 15.6 147 336-504 35-184 (190)
97 3put_A Hypothetical conserved 30.0 2.5E+02 0.0085 23.7 14.9 144 337-506 10-155 (166)
98 1t17_A Conserved hypothetical 29.7 47 0.0016 27.6 4.1 25 444-469 91-115 (148)
99 1fao_A Dual adaptor of phospho 29.6 96 0.0033 24.7 5.9 46 196-241 40-85 (126)
100 1ou8_A Stringent starvation pr 25.4 79 0.0027 25.4 4.3 38 192-229 59-96 (111)
101 2cod_A Centaurin-delta 1; ARF 25.4 1E+02 0.0034 24.1 5.2 41 197-241 32-72 (115)
102 3tvq_A Multifunctional cyclase 25.0 81 0.0028 27.3 4.8 58 444-505 91-148 (169)
103 1yfn_A Stringent starvation pr 24.5 83 0.0028 25.6 4.3 37 192-228 60-96 (118)
104 1ou9_A Stringent starvation pr 23.5 88 0.003 25.8 4.3 37 192-228 59-95 (129)
105 2gcl_A Hypothetical 63.0 kDa p 21.9 1.5E+02 0.0053 27.7 6.3 70 180-272 166-240 (261)
106 1y5o_A TFB1, RNA polymerase II 20.4 3.4E+02 0.012 21.9 9.1 54 182-242 6-65 (115)
No 1
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.82 E-value=1.2e-19 Score=158.82 Aligned_cols=120 Identities=23% Similarity=0.412 Sum_probs=108.5
Q ss_pred CCCCCceEEEEEEEEeecCcCCCCCCCCCcEEEEEECCeEEeeeeecCCCCCccccEEEEEecCCCcEEEEEEEEcCCCC
Q 009822 8 PQTNSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVPGSRYPMWGEEFNFSVDELPVQIIVTIYDWDIIW 87 (524)
Q Consensus 8 ~~~~~~~~L~V~vi~A~~L~~~d~~g~~dpyv~v~~~~~~~~T~~~~~t~nP~W~e~f~f~v~~~~~~L~v~v~d~d~~~ 87 (524)
......+.|.|+|++|++|++++..|.+||||++.+++..++|+++++++||.|||+|.|.+.+....|.|+|||++..+
T Consensus 7 ~~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~l~i~V~d~d~~~ 86 (133)
T 2ep6_A 7 GDVKDVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPIKDIHDVLEVTVFDEDGDK 86 (133)
T ss_dssp CSCCCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEESCTTCEEEEEEEEEETTE
T ss_pred cccCCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECCEEEEeeeecCCCCCccccEEEEEecCCCCEEEEEEEECCCCC
Confidence 44577899999999999999999999999999999999999999999999999999999999887788999999999998
Q ss_pred CCceeEEEEEEcccCCCcccEEEEecC------CCCeeEEEEEEEe
Q 009822 88 KSTVLGSVIVTVESEGQTGAVWYTLDS------PSGQVCLHIKTIK 127 (524)
Q Consensus 88 ~d~~iG~~~i~l~~~~~~~~~w~~L~~------~~G~i~~~l~~~~ 127 (524)
++++||++.+++.++.....+|++|.. ..|+|++++.+.+
T Consensus 87 ~~~~lG~~~i~l~~l~~~~~~w~~L~~~~~~~~~~G~i~l~i~~~~ 132 (133)
T 2ep6_A 87 PPDFLGKVAIPLLSIRDGQPNCYVLKNKDLEQAFKGVIYLEMDLIY 132 (133)
T ss_dssp EEEECCBCEEEGGGCCSSCCEECCCBCSCTTSCCSSEEEEEEEEEE
T ss_pred CCCeeEEEEEEHHHccCCCceEEEeecCCCCCccceEEEEEEEEEe
Confidence 999999999999999666689999975 3488888887764
No 2
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.80 E-value=1.1e-18 Score=155.75 Aligned_cols=117 Identities=29% Similarity=0.495 Sum_probs=104.7
Q ss_pred CCCceEEEEEEEEeecCcCCCCCCCCCcEEEEEECCeEEeeeeecCCCCCccccEEEEEecCCCcEEEEEEEEcCCC---
Q 009822 10 TNSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVPGSRYPMWGEEFNFSVDELPVQIIVTIYDWDII--- 86 (524)
Q Consensus 10 ~~~~~~L~V~vi~A~~L~~~d~~g~~dpyv~v~~~~~~~~T~~~~~t~nP~W~e~f~f~v~~~~~~L~v~v~d~d~~--- 86 (524)
....+.|.|+|++|++|++++..|.+||||++.++....+|+++++++||.|||+|.|.+......|.|+|||++..
T Consensus 13 ~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~~~~l~~~v~d~d~~~~~ 92 (148)
T 3kwu_A 13 SKWSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNSSDRIKVRVLDEDDDIKS 92 (148)
T ss_dssp --CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEECSTTCEEEEEEEECCCSHHH
T ss_pred cccccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCEEEECCccCCCCCCCcccEEEEEecCCCCEEEEEEEECCCCccc
Confidence 34579999999999999999999999999999999999999999999999999999999987778899999999986
Q ss_pred --------CCCceeEEEEEEcccCCCcccEEEEecC------CCCeeEEEEEEE
Q 009822 87 --------WKSTVLGSVIVTVESEGQTGAVWYTLDS------PSGQVCLHIKTI 126 (524)
Q Consensus 87 --------~~d~~iG~~~i~l~~~~~~~~~w~~L~~------~~G~i~~~l~~~ 126 (524)
+++++||++.++|.++.....+|++|.. ..|+|++++.+.
T Consensus 93 ~~~~~~~~~~~~~lG~~~i~l~~l~~~~~~w~~L~~~~~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 93 RVKQRFKRESDDFLGQTIIEVRTLSGEMDVWYNLDKRTDKSAVSGAIRLHISVE 146 (148)
T ss_dssp HHHTTTSSCSSEEEEEEEEEGGGCCSEEEEEEECBCSSTTCCCCCEEEEEEEEE
T ss_pred cccccccCCCCccEEEEEEEHHHCcCCCCEEEEcccCCCCCCCceEEEEEEEEE
Confidence 7899999999999999777889999974 248888877754
No 3
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.79 E-value=7.1e-19 Score=157.77 Aligned_cols=113 Identities=15% Similarity=0.225 Sum_probs=99.3
Q ss_pred CCceEEEEEEEEeecCcCCCC----------CCCCCcEEEEEECCeE-EeeeeecCCCCCccccEEEEEecCCCcEEEEE
Q 009822 11 NSAYLIKLELLAAKNLIGANL----------NGTSDPYAIITCGSEK-RFSSMVPGSRYPMWGEEFNFSVDELPVQIIVT 79 (524)
Q Consensus 11 ~~~~~L~V~vi~A~~L~~~d~----------~g~~dpyv~v~~~~~~-~~T~~~~~t~nP~W~e~f~f~v~~~~~~L~v~ 79 (524)
...|.|.|+|++|++|+++|. .|.+||||++.++... .+|+++++++||.|||+|.|.+.+ ...|.|+
T Consensus 26 ~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~f~v~~-~~~L~~~ 104 (157)
T 2fk9_A 26 KFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTD-GGHLELA 104 (157)
T ss_dssp CEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEE-ECEEEEE
T ss_pred cCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCCCCccCcEEEEEcCC-CCEEEEE
Confidence 457899999999999999883 3679999999998766 589999999999999999999865 4689999
Q ss_pred EEEcCCCCCCceeEEEEEEcccC--C----CcccEEEEecCCCCeeEEEEEE
Q 009822 80 IYDWDIIWKSTVLGSVIVTVESE--G----QTGAVWYTLDSPSGQVCLHIKT 125 (524)
Q Consensus 80 v~d~d~~~~d~~iG~~~i~l~~~--~----~~~~~w~~L~~~~G~i~~~l~~ 125 (524)
|||+|.+++|++||.+.|+|.++ + ...+.|++|.+ .|+|++.+.+
T Consensus 105 V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~-~G~i~l~l~~ 155 (157)
T 2fk9_A 105 VFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLEP-EGKVFVVITL 155 (157)
T ss_dssp EEECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS-SCEEEEEEEE
T ss_pred EEECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECCC-CcEEEEEEEE
Confidence 99999999999999999999987 2 44689999985 8999888876
No 4
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.78 E-value=2.9e-18 Score=151.33 Aligned_cols=118 Identities=19% Similarity=0.330 Sum_probs=101.8
Q ss_pred CCceEEEEEEEEeecCcCCCCCCCCCcEEEEEECCeEEeeeeecCCCCCccccEEEEEecC----CCcEEEEEEEEcCCC
Q 009822 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVPGSRYPMWGEEFNFSVDE----LPVQIIVTIYDWDII 86 (524)
Q Consensus 11 ~~~~~L~V~vi~A~~L~~~d~~g~~dpyv~v~~~~~~~~T~~~~~t~nP~W~e~f~f~v~~----~~~~L~v~v~d~d~~ 86 (524)
...|.|.|+|++|++|+.++. |.+||||+++++...++|+++++++||.|||+|.|.+.. ....|.|+|||++.+
T Consensus 4 ~~~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~~ 82 (140)
T 2dmh_A 4 GSSGMLRVIVESASNIPKTKF-GKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFETI 82 (140)
T ss_dssp CBCCEEEEEEEEEESCCCCSS-SCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTCS
T ss_pred CCCcEEEEEEEEeeCCCCCCC-CCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCCC
Confidence 567899999999999999998 999999999999999999999999999999999999864 357799999999999
Q ss_pred CCCceeEEEEEEcccC--CCcccEEEE---ecCC-----CCeeEEEEEEEecc
Q 009822 87 WKSTVLGSVIVTVESE--GQTGAVWYT---LDSP-----SGQVCLHIKTIKLP 129 (524)
Q Consensus 87 ~~d~~iG~~~i~l~~~--~~~~~~w~~---L~~~-----~G~i~~~l~~~~~~ 129 (524)
+++++||.+.++|.++ +.....|+. |... .|+|++++.+.+..
T Consensus 83 ~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~~~~G~l~l~~~~~p~~ 135 (140)
T 2dmh_A 83 GQNKLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQDTGATIDLVIGYDPPS 135 (140)
T ss_dssp SSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCCEEEEEEEEEEEECCCB
T ss_pred CCCceEEEEEEEHHHhccCCCceeEEeeeeccCCCCCCCCCEEEEEEEEECCC
Confidence 9999999999999998 445678988 6442 26777777766544
No 5
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.78 E-value=1.2e-18 Score=153.11 Aligned_cols=120 Identities=22% Similarity=0.376 Sum_probs=104.8
Q ss_pred CCCCceEEEEEEEEeecCcCCCCCCCCCcEEEEEECCeEEeeeeec-CCCCCccccEEEEEecCCCcEEEEEEEEcCCCC
Q 009822 9 QTNSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVP-GSRYPMWGEEFNFSVDELPVQIIVTIYDWDIIW 87 (524)
Q Consensus 9 ~~~~~~~L~V~vi~A~~L~~~d~~g~~dpyv~v~~~~~~~~T~~~~-~t~nP~W~e~f~f~v~~~~~~L~v~v~d~d~~~ 87 (524)
+....+.|.|+|++|++|+..+..|.+||||+++++....+|++++ +++||.|||+|.|.+......|.|+|||++.++
T Consensus 5 ~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v~~~~~~l~~~V~d~~~~~ 84 (136)
T 1wfj_A 5 SSGPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSEGTTELKAKIFDKDVGT 84 (136)
T ss_dssp CCCCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEESSCCEEEEEECCSSSCT
T ss_pred CCCCcEEEEEEEEeccCCCCcccCCCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEECCCCCEEEEEEEECCCCC
Confidence 3467899999999999999999999999999999998889999998 899999999999999877788999999999999
Q ss_pred CCceeEEEEEEcccC---CCcccEEEEecC---CCCeeEEEEEEEec
Q 009822 88 KSTVLGSVIVTVESE---GQTGAVWYTLDS---PSGQVCLHIKTIKL 128 (524)
Q Consensus 88 ~d~~iG~~~i~l~~~---~~~~~~w~~L~~---~~G~i~~~l~~~~~ 128 (524)
+|++||.+.++|.++ +.....|++|.. ..|+|++++.+.+.
T Consensus 85 ~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~~~G~i~l~l~~~p~ 131 (136)
T 1wfj_A 85 EDDAVGEATIPLEPVFVEGSIPPTAYNVVKDEEYKGEIWVALSFKPS 131 (136)
T ss_dssp TTCCSEEEEEESHHHHHHSEEEEEEEEEEETTEEEEEEEEEEEEEEC
T ss_pred CCceEEEEEEEHHHhccCCCCCcEEEEeecCCccCEEEEEEEEEEeC
Confidence 999999999999987 334678999962 23667777766654
No 6
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.78 E-value=3.2e-18 Score=153.54 Aligned_cols=119 Identities=19% Similarity=0.331 Sum_probs=96.0
Q ss_pred CCCCCceEEEEEEEEeecCcCCCCCCCCCcEEEEEECC------eEEeeeeecCCCCCccccEEEEEecCCCcEEEEEEE
Q 009822 8 PQTNSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGS------EKRFSSMVPGSRYPMWGEEFNFSVDELPVQIIVTIY 81 (524)
Q Consensus 8 ~~~~~~~~L~V~vi~A~~L~~~d~~g~~dpyv~v~~~~------~~~~T~~~~~t~nP~W~e~f~f~v~~~~~~L~v~v~ 81 (524)
......+.|.|+|++|++|+.++..|.+||||++.+.. ..++|+++++++||.|||+|.|.+......|.|+||
T Consensus 14 ~~~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~l~~~V~ 93 (153)
T 3b7y_A 14 EDEENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQQHRLLFEVF 93 (153)
T ss_dssp SCCTTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTTTCEEEEEEE
T ss_pred cCCCCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCCCCEEEEEEE
Confidence 34567899999999999999999899999999999863 467899999999999999999999877778999999
Q ss_pred EcCCCCCCceeEEEEEEcccCC--Cc------ccEEEEecCC------CCeeEEEEEEE
Q 009822 82 DWDIIWKSTVLGSVIVTVESEG--QT------GAVWYTLDSP------SGQVCLHIKTI 126 (524)
Q Consensus 82 d~d~~~~d~~iG~~~i~l~~~~--~~------~~~w~~L~~~------~G~i~~~l~~~ 126 (524)
|++.++++++||++.++|.++. .. ...|++|.++ .|+|++++.+.
T Consensus 94 d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~l~l~~~ 152 (153)
T 3b7y_A 94 DENRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKSRVKGYLRLKMTYL 152 (153)
T ss_dssp ECCSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTCCCCSEEEEEEEEC
T ss_pred ECCCCcCCCeeEEEEEEHHHcccCCCcccccccccccccccccCCCCcceEEEEEEEEe
Confidence 9999999999999999999882 21 1589999753 38888887764
No 7
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.77 E-value=6.6e-18 Score=155.23 Aligned_cols=120 Identities=20% Similarity=0.315 Sum_probs=96.6
Q ss_pred CCCCceEEEEEEEEeecCcCCCCCCCCCcEEEEEECC------eEEeeeeecCCCCCccccEEEEEecCCCcEEEEEEEE
Q 009822 9 QTNSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGS------EKRFSSMVPGSRYPMWGEEFNFSVDELPVQIIVTIYD 82 (524)
Q Consensus 9 ~~~~~~~L~V~vi~A~~L~~~d~~g~~dpyv~v~~~~------~~~~T~~~~~t~nP~W~e~f~f~v~~~~~~L~v~v~d 82 (524)
.+...|.|.|+|++|++|+.++..|.+||||++.+.. ..++|+++++++||.|||+|.|.+......|.|+|||
T Consensus 3 ~~~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~L~~~V~d 82 (176)
T 3m7f_B 3 HNDDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQRHRILFEVFD 82 (176)
T ss_dssp CCTTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTTTCEEEEEEEE
T ss_pred CCCCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCCCCEEEEEEEE
Confidence 3466899999999999999999999999999999864 5679999999999999999999998767789999999
Q ss_pred cCCCCCCceeEEEEEEcccCCCc-cc-------EEEEecCC------CCeeEEEEEEEec
Q 009822 83 WDIIWKSTVLGSVIVTVESEGQT-GA-------VWYTLDSP------SGQVCLHIKTIKL 128 (524)
Q Consensus 83 ~d~~~~d~~iG~~~i~l~~~~~~-~~-------~w~~L~~~------~G~i~~~l~~~~~ 128 (524)
++.++++++||.+.|+|..+... .. .||+|..+ .|.|++++.+.+.
T Consensus 83 ~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 83 ENRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLPK 142 (176)
T ss_dssp CC----CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTCCCCSEEEEEEEECC-
T ss_pred CCCCCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCCccCEEEEEEEEEEeC
Confidence 99999999999999999998321 11 79999752 4888888887765
No 8
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.76 E-value=2.8e-18 Score=150.80 Aligned_cols=114 Identities=18% Similarity=0.238 Sum_probs=98.7
Q ss_pred CceEEEEEEEEeecCcCCCCCCC-----------CCcEEEEEECCeE-EeeeeecCCCCCccccEEEEEecCCCcEEEEE
Q 009822 12 SAYLIKLELLAAKNLIGANLNGT-----------SDPYAIITCGSEK-RFSSMVPGSRYPMWGEEFNFSVDELPVQIIVT 79 (524)
Q Consensus 12 ~~~~L~V~vi~A~~L~~~d~~g~-----------~dpyv~v~~~~~~-~~T~~~~~t~nP~W~e~f~f~v~~~~~~L~v~ 79 (524)
..|.|.|+|++|++|+++|..+. +||||++.++... .+|+++++++||.|||+|.|.+.+. ..|.|+
T Consensus 4 ~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~-~~L~~~ 82 (136)
T 1gmi_A 4 FNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNG-RKIELA 82 (136)
T ss_dssp EEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE-CEEEEE
T ss_pred cceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCC-CEEEEE
Confidence 35899999999999999886544 9999999998765 5899999999999999999998764 789999
Q ss_pred EEEcCCCCCCceeEEEEEEcccCCC----cccEEEEecCCCCeeEEEEEEEe
Q 009822 80 IYDWDIIWKSTVLGSVIVTVESEGQ----TGAVWYTLDSPSGQVCLHIKTIK 127 (524)
Q Consensus 80 v~d~d~~~~d~~iG~~~i~l~~~~~----~~~~w~~L~~~~G~i~~~l~~~~ 127 (524)
|||+|.+++|++||.+.+++.++.. ..+.|++|.+ .|++++.+.+..
T Consensus 83 V~d~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~~-~G~i~l~l~~~~ 133 (136)
T 1gmi_A 83 VFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDLEP-EGKVYVIIDLSG 133 (136)
T ss_dssp EEECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEECBS-SCEEEEEEEEEE
T ss_pred EEeCCCCCCCCEEEEEEEEHHHhcccCCCCccEEEEcCC-CeEEEEEEEEEe
Confidence 9999999999999999999998722 2378999985 899998888753
No 9
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.75 E-value=1.3e-17 Score=144.39 Aligned_cols=111 Identities=20% Similarity=0.374 Sum_probs=93.8
Q ss_pred ceEEEEEEEEeecCcCC---CCCCCCCcEEEEEECC---eEEeeeeecCCCCCccccEEEEEec-CCCcEEEEEEEEcCC
Q 009822 13 AYLIKLELLAAKNLIGA---NLNGTSDPYAIITCGS---EKRFSSMVPGSRYPMWGEEFNFSVD-ELPVQIIVTIYDWDI 85 (524)
Q Consensus 13 ~~~L~V~vi~A~~L~~~---d~~g~~dpyv~v~~~~---~~~~T~~~~~t~nP~W~e~f~f~v~-~~~~~L~v~v~d~d~ 85 (524)
.+.|.|+|++|++|+++ +..|.+||||+++++. ..++|+++++++||.|||+|.|.+. .....|.|+|||++.
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~ 81 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY 81 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCS
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCC
Confidence 58999999999999984 6678999999999974 6789999999999999999999985 446779999999998
Q ss_pred CCCCceeEEEEEEcccC--CCcccEEEEecCCCCeeEEEEEE
Q 009822 86 IWKSTVLGSVIVTVESE--GQTGAVWYTLDSPSGQVCLHIKT 125 (524)
Q Consensus 86 ~~~d~~iG~~~i~l~~~--~~~~~~w~~L~~~~G~i~~~l~~ 125 (524)
. ++++||.+.++|.++ +.....|++|.+ .|+..+++.+
T Consensus 82 ~-~~~~iG~~~i~l~~l~~~~~~~~~~~L~~-~~~g~i~~~l 121 (126)
T 1rlw_A 82 V-MDETLGTATFTVSSMKVGEKKEVPFIFNQ-VTEMVLEMSL 121 (126)
T ss_dssp S-CCEEEEEEEEEGGGSCTTCEEEEEEEETT-TEEEEEEEEE
T ss_pred C-CCceeEEEEEEHHHccCCCcEEEEEEcCC-CceEEEEEEE
Confidence 7 489999999999988 445678999986 4444444443
No 10
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.74 E-value=2.6e-17 Score=143.76 Aligned_cols=111 Identities=23% Similarity=0.384 Sum_probs=95.0
Q ss_pred ceEEEEEEEEeecCcCCCCCCCCCcEEEEEECC--eEEeeeeecCCCCCccccEEEEEecCCCcEEEEEEEEcCCCCC--
Q 009822 13 AYLIKLELLAAKNLIGANLNGTSDPYAIITCGS--EKRFSSMVPGSRYPMWGEEFNFSVDELPVQIIVTIYDWDIIWK-- 88 (524)
Q Consensus 13 ~~~L~V~vi~A~~L~~~d~~g~~dpyv~v~~~~--~~~~T~~~~~t~nP~W~e~f~f~v~~~~~~L~v~v~d~d~~~~-- 88 (524)
...|.|+|++|++|+++|..|.+||||++.++. ...+|+++++++||.|||+|.|.+.... .|.|+|||++.+++
T Consensus 4 ~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~-~l~~~v~d~d~~~~~~ 82 (132)
T 3pyc_A 4 FIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKTD-SITISVWNHKKIHKKQ 82 (132)
T ss_dssp EEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETTC-CEEEEEEEGGGTTSST
T ss_pred eEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCCC-EEEEEEEECCCCCCCC
Confidence 467999999999999999999999999999964 6789999999999999999999987643 49999999998876
Q ss_pred -CceeEEEEEEcccC---CCcccEEEEecCC--------CCeeEEEEE
Q 009822 89 -STVLGSVIVTVESE---GQTGAVWYTLDSP--------SGQVCLHIK 124 (524)
Q Consensus 89 -d~~iG~~~i~l~~~---~~~~~~w~~L~~~--------~G~i~~~l~ 124 (524)
|++||++.+++..+ ......|++|..+ .|+|.+++.
T Consensus 83 ~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~ 130 (132)
T 3pyc_A 83 GAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQ 130 (132)
T ss_dssp TTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEE
T ss_pred CCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEE
Confidence 79999999998876 4445689999754 466666654
No 11
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.72 E-value=4.2e-17 Score=142.91 Aligned_cols=103 Identities=15% Similarity=0.310 Sum_probs=90.2
Q ss_pred CceEEEEEEEEeecCcCCCCCCCCCcEEEEEE-----CCeEEeeeeecCCCCCccccEEEEE-ecC---CCcEEEEEEEE
Q 009822 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITC-----GSEKRFSSMVPGSRYPMWGEEFNFS-VDE---LPVQIIVTIYD 82 (524)
Q Consensus 12 ~~~~L~V~vi~A~~L~~~d~~g~~dpyv~v~~-----~~~~~~T~~~~~t~nP~W~e~f~f~-v~~---~~~~L~v~v~d 82 (524)
..+.|.|+|++|++|+. +..|.+||||++++ .....+|+++++++||.|||+|.|. +.. ....|.|+|||
T Consensus 18 ~~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V~d 96 (134)
T 2b3r_A 18 RNGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSVLS 96 (134)
T ss_dssp ETTEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEEEE
T ss_pred cCCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEEEE
Confidence 45789999999999997 77899999999998 3467799999999999999999999 653 35689999999
Q ss_pred cCCCCCCceeEEEEEEcccC--CCcccEEEEecCC
Q 009822 83 WDIIWKSTVLGSVIVTVESE--GQTGAVWYTLDSP 115 (524)
Q Consensus 83 ~d~~~~d~~iG~~~i~l~~~--~~~~~~w~~L~~~ 115 (524)
++.++++++||++.++|.++ +.....||+|.++
T Consensus 97 ~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~ 131 (134)
T 2b3r_A 97 AESLRENFFLGGITLPLKDFNLSKETVKWYQLTAA 131 (134)
T ss_dssp CCSSSCCEEEEEEEEEGGGSCTTSCEEEEEECBC-
T ss_pred CCCCCCCcEEEEEEEEhhhccCCCCcceeEECCCc
Confidence 99999999999999999998 4567899999863
No 12
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.72 E-value=1.8e-17 Score=148.90 Aligned_cols=104 Identities=14% Similarity=0.122 Sum_probs=91.6
Q ss_pred CCceEEEEEEEEeecCcCCCCCCCCCcEEEEEECC------eEEeeeeecCCCCCccccEEEEEecCC---CcEEEEEEE
Q 009822 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGS------EKRFSSMVPGSRYPMWGEEFNFSVDEL---PVQIIVTIY 81 (524)
Q Consensus 11 ~~~~~L~V~vi~A~~L~~~d~~g~~dpyv~v~~~~------~~~~T~~~~~t~nP~W~e~f~f~v~~~---~~~L~v~v~ 81 (524)
...+.|.|+|++|++|+++|..|.+||||++++.. .+++|+++++++||.|||+|.|.+... ...|.|+||
T Consensus 40 ~~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~V~ 119 (155)
T 2z0u_A 40 EKNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVDVC 119 (155)
T ss_dssp TTTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEEEE
T ss_pred CCCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEEEE
Confidence 34578999999999999999999999999999854 267999999999999999999997542 467999999
Q ss_pred EcCCCCCCceeEEEEEEcccC---CCcccEEEEecC
Q 009822 82 DWDIIWKSTVLGSVIVTVESE---GQTGAVWYTLDS 114 (524)
Q Consensus 82 d~d~~~~d~~iG~~~i~l~~~---~~~~~~w~~L~~ 114 (524)
|+|.++++++||++.++|.++ .....+||+|.+
T Consensus 120 d~d~~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~~ 155 (155)
T 2z0u_A 120 TTDRSHLEECLGGAQISLAEVCRSGERSTRWYNLLS 155 (155)
T ss_dssp EECTTSCEEEEEEEEEECTTSCTTCCCEEEEEEEBC
T ss_pred ECCCCCCCcEEEEEEEEHHHccCCCCccccceEccC
Confidence 999999999999999999988 356789999863
No 13
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.71 E-value=9.4e-17 Score=146.89 Aligned_cols=117 Identities=12% Similarity=0.220 Sum_probs=95.9
Q ss_pred CCceEEEEEEEEeecCcCCCCCCCCCcEEEEEECCeEEeeeeecCCCCCccccEEEEEecCCCcEEEEEEEEcCCCCCCc
Q 009822 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVPGSRYPMWGEEFNFSVDELPVQIIVTIYDWDIIWKST 90 (524)
Q Consensus 11 ~~~~~L~V~vi~A~~L~~~d~~g~~dpyv~v~~~~~~~~T~~~~~t~nP~W~e~f~f~v~~~~~~L~v~v~d~d~~~~d~ 90 (524)
...+.|.|+|++|++|+..+..+.+||||++.+++...+|+++++++||.|||+|.|.+.. ...|.|+|||+|.+++|+
T Consensus 33 ~~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v~~-~~~L~~~V~D~d~~~~dd 111 (173)
T 2nq3_A 33 TMKSQLQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIVTP-VSKLHFRVWSHQTLKSDV 111 (173)
T ss_dssp SCCEEEEEEEEEEEECCCC--CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEECT-TCEEEEEEEECCSSSCCE
T ss_pred CCceEEEEEEEEeECCCCcccCCCCCeEEEEEECCEEeEccccCCCCCCeECCEEEEEeCC-CCEEEEEEEECCCCCCCc
Confidence 4578899999999999944445569999999999988999999999999999999999864 788999999999999999
Q ss_pred eeEEEEEEcccCC---C----cccEEEEecCC------CCeeEEEEEEEec
Q 009822 91 VLGSVIVTVESEG---Q----TGAVWYTLDSP------SGQVCLHIKTIKL 128 (524)
Q Consensus 91 ~iG~~~i~l~~~~---~----~~~~w~~L~~~------~G~i~~~l~~~~~ 128 (524)
+||.+.++|.++. . ....|++|..+ .|+|.+.|.+...
T Consensus 112 ~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~~~~~G~L~v~l~~l~~ 162 (173)
T 2nq3_A 112 LLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLDGLQL 162 (173)
T ss_dssp EEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEEEEEEEEEESEEC
T ss_pred eEEEEEEEHHHhcccCCCCcceeEEEEECccCCCCCcccEEEEEEEeeeec
Confidence 9999999999871 1 12679999753 3666666655433
No 14
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.70 E-value=4.4e-17 Score=144.34 Aligned_cols=104 Identities=23% Similarity=0.413 Sum_probs=92.5
Q ss_pred CCceEEEEEEEEeecCcCCCCCCCCCcEEEEEE---CCeEEeeeeecCCCCCccccEEEEEecC---CCcEEEEEEEEcC
Q 009822 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITC---GSEKRFSSMVPGSRYPMWGEEFNFSVDE---LPVQIIVTIYDWD 84 (524)
Q Consensus 11 ~~~~~L~V~vi~A~~L~~~d~~g~~dpyv~v~~---~~~~~~T~~~~~t~nP~W~e~f~f~v~~---~~~~L~v~v~d~d 84 (524)
...+.|.|+|++|++|+.++..+.+||||++.+ +....+|+++++++||.|||+|.|.+.. ....|.|+|||++
T Consensus 31 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d 110 (143)
T 3f04_A 31 FQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFD 110 (143)
T ss_dssp TTTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEECC
T ss_pred CCCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEeCC
Confidence 456889999999999999999999999999998 4557899999999999999999999753 2467999999999
Q ss_pred CCCCCceeEEEEEEcccC--CCcccEEEEecC
Q 009822 85 IIWKSTVLGSVIVTVESE--GQTGAVWYTLDS 114 (524)
Q Consensus 85 ~~~~d~~iG~~~i~l~~~--~~~~~~w~~L~~ 114 (524)
.++++++||++.++|..+ +.....|++|.+
T Consensus 111 ~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 142 (143)
T 3f04_A 111 RFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 142 (143)
T ss_dssp SSSCCEEEEEEEEEGGGCCTTSCEEEEEECBC
T ss_pred CCCCCceEEEEEEEHHHccCCCCcceEEECcC
Confidence 999999999999999988 456789999975
No 15
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.70 E-value=8.3e-17 Score=144.18 Aligned_cols=104 Identities=23% Similarity=0.413 Sum_probs=92.4
Q ss_pred CCceEEEEEEEEeecCcCCCCCCCCCcEEEEEE---CCeEEeeeeecCCCCCccccEEEEEecC---CCcEEEEEEEEcC
Q 009822 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITC---GSEKRFSSMVPGSRYPMWGEEFNFSVDE---LPVQIIVTIYDWD 84 (524)
Q Consensus 11 ~~~~~L~V~vi~A~~L~~~d~~g~~dpyv~v~~---~~~~~~T~~~~~t~nP~W~e~f~f~v~~---~~~~L~v~v~d~d 84 (524)
...+.|.|+|++|++|+.++..|.+||||++++ +....+|+++++++||.|||+|.|.+.. ....|.|+|||++
T Consensus 39 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d 118 (152)
T 1rsy_A 39 FQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFD 118 (152)
T ss_dssp TTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEECC
T ss_pred CCCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEECC
Confidence 356789999999999999999999999999998 3457799999999999999999998753 2577999999999
Q ss_pred CCCCCceeEEEEEEcccC--CCcccEEEEecC
Q 009822 85 IIWKSTVLGSVIVTVESE--GQTGAVWYTLDS 114 (524)
Q Consensus 85 ~~~~d~~iG~~~i~l~~~--~~~~~~w~~L~~ 114 (524)
.++++++||++.++|.++ +....+|++|.+
T Consensus 119 ~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 150 (152)
T 1rsy_A 119 RFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 150 (152)
T ss_dssp SSSCCEEEEEEEEEGGGCCCSSCEEEEEECBC
T ss_pred CCCCCcEEEEEEEEchhccCCCCcceEEECCC
Confidence 999999999999999998 455789999975
No 16
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.70 E-value=1.1e-16 Score=141.42 Aligned_cols=105 Identities=20% Similarity=0.350 Sum_probs=92.0
Q ss_pred CCceEEEEEEEEeecCcCCCCCCCCCcEEEEEEC---CeEEeeeeecCCCCCccccEEEEEecC----CCcEEEEEEEEc
Q 009822 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITCG---SEKRFSSMVPGSRYPMWGEEFNFSVDE----LPVQIIVTIYDW 83 (524)
Q Consensus 11 ~~~~~L~V~vi~A~~L~~~d~~g~~dpyv~v~~~---~~~~~T~~~~~t~nP~W~e~f~f~v~~----~~~~L~v~v~d~ 83 (524)
+..+.|.|+|++|++|+.++..|.+||||++++. ....+|+++++++||.|||+|.|.+.. ....|.|+|||+
T Consensus 23 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~ 102 (141)
T 2d8k_A 23 FQESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDY 102 (141)
T ss_dssp SSSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEEEC
T ss_pred CCCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEEEC
Confidence 3567899999999999999999999999999983 457799999999999999999998522 257799999999
Q ss_pred CCCCCCceeEEEEEEcccC--CCcccEEEEecCC
Q 009822 84 DIIWKSTVLGSVIVTVESE--GQTGAVWYTLDSP 115 (524)
Q Consensus 84 d~~~~d~~iG~~~i~l~~~--~~~~~~w~~L~~~ 115 (524)
+.++++++||++.++|.++ +.....|++|.++
T Consensus 103 d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 136 (141)
T 2d8k_A 103 DRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKPS 136 (141)
T ss_dssp CSSSSCEEEEEEEEETTTSCTTSCEEEEECCEEC
T ss_pred CCCCCCcEEEEEEEEhhhhcCCCCccEEEECcCC
Confidence 9999999999999999998 4457899999764
No 17
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.70 E-value=6.2e-17 Score=140.65 Aligned_cols=103 Identities=22% Similarity=0.395 Sum_probs=85.6
Q ss_pred CCceEEEEEEEEeecCcCCCCCCCCCcEEEEEE-----CCeEEeeeeecCCCCCccccEEEEEecC----CCcEEEEEEE
Q 009822 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITC-----GSEKRFSSMVPGSRYPMWGEEFNFSVDE----LPVQIIVTIY 81 (524)
Q Consensus 11 ~~~~~L~V~vi~A~~L~~~d~~g~~dpyv~v~~-----~~~~~~T~~~~~t~nP~W~e~f~f~v~~----~~~~L~v~v~ 81 (524)
+..+.|.|+|++|++|+.++..|.+||||++.+ +....+|+++++++||.|||+|.|.+.. ....|.|+||
T Consensus 15 ~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~V~ 94 (129)
T 2bwq_A 15 KVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLW 94 (129)
T ss_dssp TTTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEEEE
T ss_pred cCCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEEEE
Confidence 446899999999999999999999999999998 3567899999999999999999999522 2467999999
Q ss_pred EcCCCCC--CceeEEEEEEcccC-CCcccEEEEec
Q 009822 82 DWDIIWK--STVLGSVIVTVESE-GQTGAVWYTLD 113 (524)
Q Consensus 82 d~d~~~~--d~~iG~~~i~l~~~-~~~~~~w~~L~ 113 (524)
|++..++ +++||.+.++|.++ .....+||+|+
T Consensus 95 d~d~~~~~~~~~lG~~~i~l~~l~~~~~~~W~~Lq 129 (129)
T 2bwq_A 95 DQARVREEESEFLGEILIELETALLDDEPHWYKLQ 129 (129)
T ss_dssp EC-------CEEEEEEEEEGGGCCCSSCEEEEECC
T ss_pred ECCcCcCcCCceeEEEEEEccccCCCcCCccEECc
Confidence 9999887 99999999999987 44478999984
No 18
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.70 E-value=3e-17 Score=146.31 Aligned_cols=106 Identities=15% Similarity=0.214 Sum_probs=92.0
Q ss_pred CCceEEEEEEEEeecCcCCC-CCCCCCcEEEEEEC-----CeEEeeeeecCCCCCccccEEEEEecCC---CcEEEEEEE
Q 009822 11 NSAYLIKLELLAAKNLIGAN-LNGTSDPYAIITCG-----SEKRFSSMVPGSRYPMWGEEFNFSVDEL---PVQIIVTIY 81 (524)
Q Consensus 11 ~~~~~L~V~vi~A~~L~~~d-~~g~~dpyv~v~~~-----~~~~~T~~~~~t~nP~W~e~f~f~v~~~---~~~L~v~v~ 81 (524)
+..+.|.|+|++|++|+.++ ..|.+||||++.+. ....+|+++++++||.|||+|.|.+... ...|.|+||
T Consensus 20 ~~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~V~ 99 (148)
T 3fdw_A 20 QQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSVW 99 (148)
T ss_dssp TTTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEEEE
T ss_pred CCCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEEEE
Confidence 44688999999999999988 68899999999985 3467899999999999999999998653 346999999
Q ss_pred EcCCCCCCceeEEEEEEcccC--CCcccEEEEecCCC
Q 009822 82 DWDIIWKSTVLGSVIVTVESE--GQTGAVWYTLDSPS 116 (524)
Q Consensus 82 d~d~~~~d~~iG~~~i~l~~~--~~~~~~w~~L~~~~ 116 (524)
|+|.++++++||++.++|.++ ......|++|.++.
T Consensus 100 d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~ 136 (148)
T 3fdw_A 100 HHGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGKI 136 (148)
T ss_dssp EECGGGCEEEEEEEEEEHHHHHHHCCSEEEEECBCC-
T ss_pred ECCCCcCCcEEEEEEEEcccccccCCccceEECcCcc
Confidence 999999999999999999988 45567999998754
No 19
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.69 E-value=7.3e-17 Score=141.66 Aligned_cols=103 Identities=27% Similarity=0.494 Sum_probs=92.1
Q ss_pred CceEEEEEEEEeecCcCCCCCCCCCcEEEEEE-----CCeEEeeeeecCCCCCccccEEEEEecC--CCcEEEEEEEEcC
Q 009822 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITC-----GSEKRFSSMVPGSRYPMWGEEFNFSVDE--LPVQIIVTIYDWD 84 (524)
Q Consensus 12 ~~~~L~V~vi~A~~L~~~d~~g~~dpyv~v~~-----~~~~~~T~~~~~t~nP~W~e~f~f~v~~--~~~~L~v~v~d~d 84 (524)
..+.|.|+|++|++|+.++..|.+||||++.+ .....+|+++++++||.|||+|.|.+.. ....|.|+|||++
T Consensus 14 ~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~d 93 (137)
T 3rdl_A 14 TDEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWD 93 (137)
T ss_dssp ETTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEECC
T ss_pred cCCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEECC
Confidence 35899999999999999999999999999998 4667899999999999999999999854 3457999999999
Q ss_pred CCCCCceeEEEEEEcccC-CCcccEEEEecC
Q 009822 85 IIWKSTVLGSVIVTVESE-GQTGAVWYTLDS 114 (524)
Q Consensus 85 ~~~~d~~iG~~~i~l~~~-~~~~~~w~~L~~ 114 (524)
..+++++||.+.++|.++ .....+||+|.+
T Consensus 94 ~~~~~~~iG~~~i~l~~l~~~~~~~W~~L~~ 124 (137)
T 3rdl_A 94 RTTRNDFMGSLSFGVSELMKMPASGWYKLLN 124 (137)
T ss_dssp SSSCCEEEEEEEEEHHHHHHSCEEEEEECBC
T ss_pred CCCCCceEEEEEEeHHHhccCccCceEECcC
Confidence 999999999999999988 444789999976
No 20
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.69 E-value=9.4e-17 Score=143.28 Aligned_cols=102 Identities=27% Similarity=0.471 Sum_probs=91.1
Q ss_pred ceEEEEEEEEeecCcCCCCCCCCCcEEEEEEC-----CeEEeeeeecCCCCCccccEEEEEecCC--CcEEEEEEEEcCC
Q 009822 13 AYLIKLELLAAKNLIGANLNGTSDPYAIITCG-----SEKRFSSMVPGSRYPMWGEEFNFSVDEL--PVQIIVTIYDWDI 85 (524)
Q Consensus 13 ~~~L~V~vi~A~~L~~~d~~g~~dpyv~v~~~-----~~~~~T~~~~~t~nP~W~e~f~f~v~~~--~~~L~v~v~d~d~ 85 (524)
.+.|.|+|++|++|+.++..|.+||||++++. ....+|+++++++||.|||+|.|.+... ...|.|+|||++.
T Consensus 30 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~ 109 (149)
T 1a25_A 30 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL 109 (149)
T ss_dssp SSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECCS
T ss_pred CCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECCC
Confidence 46799999999999999999999999999985 4577999999999999999999998642 4679999999999
Q ss_pred CCCCceeEEEEEEcccC-CCcccEEEEecC
Q 009822 86 IWKSTVLGSVIVTVESE-GQTGAVWYTLDS 114 (524)
Q Consensus 86 ~~~d~~iG~~~i~l~~~-~~~~~~w~~L~~ 114 (524)
++++++||++.++|.++ ......||+|.+
T Consensus 110 ~~~~~~iG~~~i~l~~l~~~~~~~W~~L~~ 139 (149)
T 1a25_A 110 TSRNDFMGSLSFGISELQKAGVDGWFKLLS 139 (149)
T ss_dssp SSCCEEEEEEEEEHHHHTTCCEEEEEECBC
T ss_pred CCCCCEEEEEEEEHHHhCcCccCCeEEccC
Confidence 99999999999999988 445789999976
No 21
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.69 E-value=3.4e-17 Score=144.83 Aligned_cols=105 Identities=25% Similarity=0.440 Sum_probs=91.3
Q ss_pred ceEEEEEEEEeecCcCCCCCCCCCcEEEEEECCe--------------EEeeeeecCCCCCccccEEEEE-ecC---CCc
Q 009822 13 AYLIKLELLAAKNLIGANLNGTSDPYAIITCGSE--------------KRFSSMVPGSRYPMWGEEFNFS-VDE---LPV 74 (524)
Q Consensus 13 ~~~L~V~vi~A~~L~~~d~~g~~dpyv~v~~~~~--------------~~~T~~~~~t~nP~W~e~f~f~-v~~---~~~ 74 (524)
.+.|.|+|++|++|++++..|.+||||++.+... ..+|+++++++||.|||+|.|. +.. ...
T Consensus 17 ~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~ 96 (142)
T 1rh8_A 17 LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKK 96 (142)
T ss_dssp TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTC
T ss_pred CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCC
Confidence 4689999999999999999999999999999753 4679999999999999999997 532 356
Q ss_pred EEEEEEEEcCCCCCCceeEEEEEEcccC--CCcccEEEEecCCCC
Q 009822 75 QIIVTIYDWDIIWKSTVLGSVIVTVESE--GQTGAVWYTLDSPSG 117 (524)
Q Consensus 75 ~L~v~v~d~d~~~~d~~iG~~~i~l~~~--~~~~~~w~~L~~~~G 117 (524)
.|.|+|||+|.++++++||.+.++|..+ ......||+|.+..+
T Consensus 97 ~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~~~ 141 (142)
T 1rh8_A 97 TLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKEQTE 141 (142)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECBCCCC
T ss_pred EEEEEEEECCCCCCCceEEEEEEeccccccCCCCCeEEECCccCC
Confidence 7999999999999999999999999988 345789999987543
No 22
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.68 E-value=1.6e-16 Score=142.43 Aligned_cols=105 Identities=26% Similarity=0.411 Sum_probs=91.3
Q ss_pred CCceEEEEEEEEeecCcCCCCCCCCCcEEEEEEC-----CeEEeeeeecCCCCCccccEEEEEe--cCCCcEEEEEEEEc
Q 009822 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITCG-----SEKRFSSMVPGSRYPMWGEEFNFSV--DELPVQIIVTIYDW 83 (524)
Q Consensus 11 ~~~~~L~V~vi~A~~L~~~d~~g~~dpyv~v~~~-----~~~~~T~~~~~t~nP~W~e~f~f~v--~~~~~~L~v~v~d~ 83 (524)
...+.|.|+|++|++|++++ .|.+||||++.+. ....+|+++++++||.|||+|.|.+ .+....|.|+|||+
T Consensus 24 ~~~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~ 102 (153)
T 3fbk_A 24 AQDRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTVWNR 102 (153)
T ss_dssp ESSSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEEEEC
T ss_pred CCCCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHhCCEEEEEEEeC
Confidence 45678999999999999999 6999999999983 3567899999999999999999998 45556799999999
Q ss_pred CCCCC-CceeEEEEEEcccCC---CcccEEEEecCCC
Q 009822 84 DIIWK-STVLGSVIVTVESEG---QTGAVWYTLDSPS 116 (524)
Q Consensus 84 d~~~~-d~~iG~~~i~l~~~~---~~~~~w~~L~~~~ 116 (524)
+.+++ +++||++.++|.++. .....||+|.++.
T Consensus 103 d~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~~ 139 (153)
T 3fbk_A 103 ASQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGEH 139 (153)
T ss_dssp CSSGGGCEEEEEEEEEHHHHTC--CCEEEEEECBCTT
T ss_pred CCCCCCCcEEEEEEEEHHHhcCCCCccccEEECCChh
Confidence 99877 999999999999873 5677999998743
No 23
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.68 E-value=1.2e-16 Score=146.15 Aligned_cols=104 Identities=17% Similarity=0.286 Sum_probs=91.1
Q ss_pred ceEEEEEEEEeecCcCCCC-CCCCCcEEEEEECC-----eEEeeeeecCCCCCccccEEEEEecCCCcEEEEEEE-EcCC
Q 009822 13 AYLIKLELLAAKNLIGANL-NGTSDPYAIITCGS-----EKRFSSMVPGSRYPMWGEEFNFSVDELPVQIIVTIY-DWDI 85 (524)
Q Consensus 13 ~~~L~V~vi~A~~L~~~d~-~g~~dpyv~v~~~~-----~~~~T~~~~~t~nP~W~e~f~f~v~~~~~~L~v~v~-d~d~ 85 (524)
.+.|.|+|++|++|+++|. .|.+||||++.+.. ..++|+++++++||.|||+|.|.+......|.|+|| |+|.
T Consensus 29 ~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~L~~~V~~d~d~ 108 (171)
T 2q3x_A 29 KGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDYGR 108 (171)
T ss_dssp TTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCCTTEEEEEEEEEECST
T ss_pred CCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecCCCCEEEEEEEEcCCC
Confidence 5789999999999999985 79999999999853 267899999999999999999998666678999999 9999
Q ss_pred CCCCceeEEEEEEcccC--CCcccEEEEecCCC
Q 009822 86 IWKSTVLGSVIVTVESE--GQTGAVWYTLDSPS 116 (524)
Q Consensus 86 ~~~d~~iG~~~i~l~~~--~~~~~~w~~L~~~~ 116 (524)
++++++||++.++|.++ +....+||+|.++.
T Consensus 109 ~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~~ 141 (171)
T 2q3x_A 109 MDHKCFMGVAQILLEELDLSSMVIGWYKLFPPS 141 (171)
T ss_dssp TCSSEEEEEEEECGGGSCTTSCEEEEEECBCGG
T ss_pred CCCCCEEEEEEEEHHHcccCCCcceeEECCCcc
Confidence 99999999999999998 55678999998743
No 24
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.68 E-value=1.2e-16 Score=140.91 Aligned_cols=105 Identities=22% Similarity=0.399 Sum_probs=91.1
Q ss_pred CCceEEEEEEEEeecCcCCCCCCCCCcEEEEEE-----CCeEEeeeeecCCCCCccccEEEEEe-cC---CCcEEEEEEE
Q 009822 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITC-----GSEKRFSSMVPGSRYPMWGEEFNFSV-DE---LPVQIIVTIY 81 (524)
Q Consensus 11 ~~~~~L~V~vi~A~~L~~~d~~g~~dpyv~v~~-----~~~~~~T~~~~~t~nP~W~e~f~f~v-~~---~~~~L~v~v~ 81 (524)
+..+.|.|+|++|++|+.++..|.+||||++++ ....++|+++++++||.|||+|.|.+ .. ....|.|+||
T Consensus 18 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~ 97 (141)
T 1v27_A 18 KVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLW 97 (141)
T ss_dssp TTTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEEEE
T ss_pred CCCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEEEE
Confidence 345789999999999999999999999999998 35667999999999999999999994 32 2467999999
Q ss_pred EcCCCCC--CceeEEEEEEcccC-CCcccEEEEecCC
Q 009822 82 DWDIIWK--STVLGSVIVTVESE-GQTGAVWYTLDSP 115 (524)
Q Consensus 82 d~d~~~~--d~~iG~~~i~l~~~-~~~~~~w~~L~~~ 115 (524)
|++.+++ +++||.+.++|.++ .....+||+|.++
T Consensus 98 d~d~~~~~~~~~lG~~~i~l~~l~~~~~~~W~~L~~~ 134 (141)
T 1v27_A 98 DQARVREEESEFLGEILIELETALLDDEPHWYKLQTH 134 (141)
T ss_dssp EBCSSSSCCBCCCEEEEEEGGGCCCSSEEEEEECBCC
T ss_pred ECCCCcCCCCceEEEEEEEccccCCCCCCceEECccc
Confidence 9999887 89999999999987 4447899999863
No 25
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.67 E-value=4.3e-16 Score=137.17 Aligned_cols=101 Identities=16% Similarity=0.220 Sum_probs=87.6
Q ss_pred CceEEEEEEEEeecCcCCCCCCCCCcEEEEEEC---C-eEEeeeeecCCCCCccccEEEEEecCC---CcEEEEEEEEcC
Q 009822 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITCG---S-EKRFSSMVPGSRYPMWGEEFNFSVDEL---PVQIIVTIYDWD 84 (524)
Q Consensus 12 ~~~~L~V~vi~A~~L~~~d~~g~~dpyv~v~~~---~-~~~~T~~~~~t~nP~W~e~f~f~v~~~---~~~L~v~v~d~d 84 (524)
..+.|.|+|++|+ ++|..|.+||||++.+. . ..++|+++++++||.|||+|.|.+... ...|.|+|||+|
T Consensus 24 ~~~~L~V~v~~a~---~~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~d~d 100 (138)
T 1wfm_A 24 QKAELFVTRLEAV---TSNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCD 100 (138)
T ss_dssp TTTEEEEEEEEEE---CCCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEEECC
T ss_pred CCCEEEEEEEEEE---cCCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEEECC
Confidence 4678999999999 46778999999999983 2 256899999999999999999998642 457999999999
Q ss_pred CCCCCceeEEEEEEcccC--CCcccEEEEecCC
Q 009822 85 IIWKSTVLGSVIVTVESE--GQTGAVWYTLDSP 115 (524)
Q Consensus 85 ~~~~d~~iG~~~i~l~~~--~~~~~~w~~L~~~ 115 (524)
.++++++||++.++|.++ .....+|++|.+.
T Consensus 101 ~~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~~ 133 (138)
T 1wfm_A 101 RFSRHSVAGELRLGLDGTSVPLGAAQWGELKTS 133 (138)
T ss_dssp SSCTTSCSEEEEEESSSSSSCTTCCEEEECCCC
T ss_pred CCCCCcEEEEEEEEcccccCcccccceeeCcCC
Confidence 999999999999999998 5667899999863
No 26
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.67 E-value=3.8e-16 Score=137.44 Aligned_cols=105 Identities=18% Similarity=0.223 Sum_probs=89.5
Q ss_pred CCceEEEEEEEEeecCcCCCCC-CCCCcEEEEEEC---CeEEeeeeecCCCCCccccEEEEE-ecC---CCcEEEEEEEE
Q 009822 11 NSAYLIKLELLAAKNLIGANLN-GTSDPYAIITCG---SEKRFSSMVPGSRYPMWGEEFNFS-VDE---LPVQIIVTIYD 82 (524)
Q Consensus 11 ~~~~~L~V~vi~A~~L~~~d~~-g~~dpyv~v~~~---~~~~~T~~~~~t~nP~W~e~f~f~-v~~---~~~~L~v~v~d 82 (524)
+..+.|.|+|++|++|+.++.. |.+||||++.+. ...++|+++++++||.|||+|.|. +.. ....|.|+|||
T Consensus 19 ~~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V~d 98 (138)
T 1ugk_A 19 FERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILS 98 (138)
T ss_dssp GGGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEEEE
T ss_pred CCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEEEE
Confidence 3567899999999999999985 899999999985 367899999999999999999996 543 23579999999
Q ss_pred cCCCCCCceeEEEEEEcccCC---CcccEEEEecCC
Q 009822 83 WDIIWKSTVLGSVIVTVESEG---QTGAVWYTLDSP 115 (524)
Q Consensus 83 ~d~~~~d~~iG~~~i~l~~~~---~~~~~w~~L~~~ 115 (524)
+|.++++++||++.++|.++. .....|++|.++
T Consensus 99 ~d~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~~ 134 (138)
T 1ugk_A 99 FDRFSRDDIIGEVLIPLSGIELSEGKMLMNREIISG 134 (138)
T ss_dssp ECSSCCCCCCEEEEEECTTCCCTTCCEEEEEECBSS
T ss_pred CCCCCCCcEEEEEEEehhHccCCCCcchhhhhhhcC
Confidence 999999999999999999982 233567898764
No 27
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.66 E-value=1.5e-16 Score=140.62 Aligned_cols=106 Identities=26% Similarity=0.399 Sum_probs=90.1
Q ss_pred CCceEEEEEEEEeecCcCCCCCCCCCcEEEEEEC-----CeEEeeeeecCCCCCccccEEEEEecC---CCcEEEEEEEE
Q 009822 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITCG-----SEKRFSSMVPGSRYPMWGEEFNFSVDE---LPVQIIVTIYD 82 (524)
Q Consensus 11 ~~~~~L~V~vi~A~~L~~~d~~g~~dpyv~v~~~-----~~~~~T~~~~~t~nP~W~e~f~f~v~~---~~~~L~v~v~d 82 (524)
+..+.|.|+|++|++|++++..| +||||++++. ...++|+++++++||.|||+|.|.+.. ....|.|+|||
T Consensus 21 ~~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d 99 (142)
T 2dmg_A 21 SQRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVKN 99 (142)
T ss_dssp TTTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEEEE
T ss_pred CCCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEEEE
Confidence 34678999999999999999888 9999999983 256799999999999999999999753 23579999999
Q ss_pred cCCCCC--CceeEEEEEEcccC--CCcccEEEEecCCCC
Q 009822 83 WDIIWK--STVLGSVIVTVESE--GQTGAVWYTLDSPSG 117 (524)
Q Consensus 83 ~d~~~~--d~~iG~~~i~l~~~--~~~~~~w~~L~~~~G 117 (524)
++.+++ +++||++.++|..+ .....+|++|.++.+
T Consensus 100 ~d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~~~~ 138 (142)
T 2dmg_A 100 SGGFLSKDKGLLGKVLVALASEELAKGWTQWYDLTEDSG 138 (142)
T ss_dssp CCCSSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBCSCS
T ss_pred CCCccccCCcEEEEEEEecccccccccccceeeccCCCC
Confidence 998764 57999999999987 446788999987544
No 28
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.66 E-value=3.2e-16 Score=138.59 Aligned_cols=104 Identities=18% Similarity=0.316 Sum_probs=89.9
Q ss_pred CCceEEEEEEEEeecCcCCCCCCCCCcEEEEEECC-----eEEeeeeecCCCCCccccEEEEE-ecCC---CcEEEEEEE
Q 009822 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGS-----EKRFSSMVPGSRYPMWGEEFNFS-VDEL---PVQIIVTIY 81 (524)
Q Consensus 11 ~~~~~L~V~vi~A~~L~~~d~~g~~dpyv~v~~~~-----~~~~T~~~~~t~nP~W~e~f~f~-v~~~---~~~L~v~v~ 81 (524)
+..+.|.|+|++|++|+.++..|.+||||++++.. ...+|+++++++||.|||+|.|. +... ...|.|+||
T Consensus 26 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~ 105 (142)
T 2chd_A 26 QDNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISVC 105 (142)
T ss_dssp GGGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEEEE
T ss_pred CCCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEEEE
Confidence 35678999999999999999999999999999864 67799999999999999999998 5421 367999999
Q ss_pred EcCCCCCCceeEEEEEEcccC--CCcccEEEEecC
Q 009822 82 DWDIIWKSTVLGSVIVTVESE--GQTGAVWYTLDS 114 (524)
Q Consensus 82 d~d~~~~d~~iG~~~i~l~~~--~~~~~~w~~L~~ 114 (524)
|++.++++++||++.++|.++ +.....|++|..
T Consensus 106 d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 140 (142)
T 2chd_A 106 DEDKFGHNEFIGETRFSLKKLKANQRKNFNICLER 140 (142)
T ss_dssp EECTTSCEEEEEEEEEEGGGCCTTCCEEEEEECBC
T ss_pred ECCCCCCCcEEEEEEEEHHHcCCCCccEEEEeccc
Confidence 999999999999999999998 445567777764
No 29
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.66 E-value=5.7e-17 Score=142.48 Aligned_cols=108 Identities=26% Similarity=0.391 Sum_probs=91.2
Q ss_pred CCceEEEEEEEEeecCcCCCCCCCCCcEEEEEECC-----eEEeeeeecCCCCCccccEEEEEecCCC---cEEEEEEEE
Q 009822 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGS-----EKRFSSMVPGSRYPMWGEEFNFSVDELP---VQIIVTIYD 82 (524)
Q Consensus 11 ~~~~~L~V~vi~A~~L~~~d~~g~~dpyv~v~~~~-----~~~~T~~~~~t~nP~W~e~f~f~v~~~~---~~L~v~v~d 82 (524)
+..+.|.|+|++|++|+.++..|.+||||++++.. ...+|+++++++||.|||+|.|.+.... ..|.|+|||
T Consensus 13 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V~d 92 (138)
T 3n5a_A 13 PSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITVMD 92 (138)
T ss_dssp TTTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEEEE
T ss_pred CCCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEEEE
Confidence 45689999999999999999999999999999853 4668999999999999999999986433 569999999
Q ss_pred cCCCCCCceeEEEEEEcccCCCcccEEEEecCCCCe
Q 009822 83 WDIIWKSTVLGSVIVTVESEGQTGAVWYTLDSPSGQ 118 (524)
Q Consensus 83 ~d~~~~d~~iG~~~i~l~~~~~~~~~w~~L~~~~G~ 118 (524)
++.++++++||.+.+++........+|++|....|+
T Consensus 93 ~~~~~~~~~lG~~~i~l~~~~~~~~~W~~l~~~~~~ 128 (138)
T 3n5a_A 93 KDKLSRNDVIGKIYLSWKSGPGEVKHWKDMIARPRQ 128 (138)
T ss_dssp CCSSSCCEEEEEEEESSSSCHHHHHHHHHHHHSTTC
T ss_pred CCCCCCCcEEEEEEEccccCChHHHHHHHHHhCCCC
Confidence 999999999999999999875555666666544443
No 30
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.65 E-value=9.7e-17 Score=145.94 Aligned_cols=106 Identities=17% Similarity=0.323 Sum_probs=91.0
Q ss_pred CceEEEEEEEEeecCcCCCCCCCCCcEEEEEECC-----eEEeeeeecCCCCCccccEEEEEecCC---CcEEEEEEEEc
Q 009822 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITCGS-----EKRFSSMVPGSRYPMWGEEFNFSVDEL---PVQIIVTIYDW 83 (524)
Q Consensus 12 ~~~~L~V~vi~A~~L~~~d~~g~~dpyv~v~~~~-----~~~~T~~~~~t~nP~W~e~f~f~v~~~---~~~L~v~v~d~ 83 (524)
..+.|.|+|++|++|+.++..|.+||||++++.. ...+|+++++++||.|||+|.|.+... ...|.|+|||+
T Consensus 35 ~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~ 114 (166)
T 2cm5_A 35 QQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDY 114 (166)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEEC
T ss_pred CCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEEEEC
Confidence 4678999999999999999999999999999864 577999999999999999999998542 45799999999
Q ss_pred CCCCCCceeEEEEEEcccCCCcccEEEEecCCCC
Q 009822 84 DIIWKSTVLGSVIVTVESEGQTGAVWYTLDSPSG 117 (524)
Q Consensus 84 d~~~~d~~iG~~~i~l~~~~~~~~~w~~L~~~~G 117 (524)
+.++++++||.+.+++.+++....+|++|....+
T Consensus 115 d~~~~~~~iG~~~i~l~~~~~~~~~W~~l~~~~~ 148 (166)
T 2cm5_A 115 DIGKSNDYIGGCQLGISAKGERLKHWYECLKNKD 148 (166)
T ss_dssp CSSSCCEEEEEEEEETTCCHHHHHHHHHHHHCTT
T ss_pred CCCCCCcEEEeEEEecccCCchhHHHHHHHhCCC
Confidence 9999999999999999987555566776654333
No 31
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.65 E-value=8.4e-16 Score=138.62 Aligned_cols=104 Identities=33% Similarity=0.471 Sum_probs=88.5
Q ss_pred CCceEEEEEEEEeecCcCCCCCCCCCcEEEEEECC-----eEEeeeeecCCCCCccccEEEEEecCC---CcEEEEEEEE
Q 009822 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGS-----EKRFSSMVPGSRYPMWGEEFNFSVDEL---PVQIIVTIYD 82 (524)
Q Consensus 11 ~~~~~L~V~vi~A~~L~~~d~~g~~dpyv~v~~~~-----~~~~T~~~~~t~nP~W~e~f~f~v~~~---~~~L~v~v~d 82 (524)
+..+.|.|+|++|++|+.++..|.+||||++++.. ...+|+++++++||.|||+|.|.+... ...|.|+|||
T Consensus 22 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d 101 (159)
T 1tjx_A 22 PTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLD 101 (159)
T ss_dssp TTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEE
T ss_pred CCCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEEEE
Confidence 45679999999999999999999999999999852 356899999999999999999998542 3569999999
Q ss_pred cCCCCCCceeEEEEEEcccC--------------CCcccEEEEecC
Q 009822 83 WDIIWKSTVLGSVIVTVESE--------------GQTGAVWYTLDS 114 (524)
Q Consensus 83 ~d~~~~d~~iG~~~i~l~~~--------------~~~~~~w~~L~~ 114 (524)
++.++++++||.+.+++..+ +....+|++|.+
T Consensus 102 ~d~~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~~~~W~~L~~ 147 (159)
T 1tjx_A 102 YDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQV 147 (159)
T ss_dssp CCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHSTTCCEEEEEECBC
T ss_pred CCCCCCCceEEEEEECCCCCCcHHHHHHHHHHCCCCeeeeEEECcC
Confidence 99999999999999999854 234567777765
No 32
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.65 E-value=1.6e-16 Score=142.35 Aligned_cols=107 Identities=18% Similarity=0.346 Sum_probs=84.8
Q ss_pred CCceEEEEEEEEeecCcCCCCCCCCCcEEEEEE--CCe---EEeeeeecCCCCCccccEEEEEecCC---CcEEEEEEEE
Q 009822 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITC--GSE---KRFSSMVPGSRYPMWGEEFNFSVDEL---PVQIIVTIYD 82 (524)
Q Consensus 11 ~~~~~L~V~vi~A~~L~~~d~~g~~dpyv~v~~--~~~---~~~T~~~~~t~nP~W~e~f~f~v~~~---~~~L~v~v~d 82 (524)
+..+.|.|+|++|++|+.++..|.+||||++.+ +.. .++|+++++++||.|||+|.|.+... ...|.|+|||
T Consensus 27 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V~d 106 (153)
T 1w15_A 27 STTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLVLD 106 (153)
T ss_dssp TTTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEEEE
T ss_pred CCCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEEEEEEEe
Confidence 345789999999999999999999999999998 333 56899999999999999999998653 2569999999
Q ss_pred cCCCCCCceeEEEEEEcccCCCcccEEEEecCCCC
Q 009822 83 WDIIWKSTVLGSVIVTVESEGQTGAVWYTLDSPSG 117 (524)
Q Consensus 83 ~d~~~~d~~iG~~~i~l~~~~~~~~~w~~L~~~~G 117 (524)
++.++++++||++.+++.+......+|++|....+
T Consensus 107 ~d~~~~~~~lG~~~i~l~~~~~~~~~W~~l~~~p~ 141 (153)
T 1w15_A 107 SERGSRNEVIGRLVLGATAEGSGGGHWKEICDFPR 141 (153)
T ss_dssp CCTTSCCEEEEEEEESTTCCSHHHHHHHHHHHSTT
T ss_pred CCCCCCCcEEEEEEECCCCCchHHHHHHHHHhCCC
Confidence 99999999999999999986555667777654333
No 33
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.64 E-value=3.6e-16 Score=139.16 Aligned_cols=105 Identities=18% Similarity=0.308 Sum_probs=88.8
Q ss_pred CCceEEEEEEEEeecCcCC-CC------CCCCCcEEEEEEC---CeEEeeeeecCCCCCccccEEEEEecC---CCcEEE
Q 009822 11 NSAYLIKLELLAAKNLIGA-NL------NGTSDPYAIITCG---SEKRFSSMVPGSRYPMWGEEFNFSVDE---LPVQII 77 (524)
Q Consensus 11 ~~~~~L~V~vi~A~~L~~~-d~------~g~~dpyv~v~~~---~~~~~T~~~~~t~nP~W~e~f~f~v~~---~~~~L~ 77 (524)
+..+.|.|+|++|++|+.+ +. .|.+||||++++. ....+|+++++++||.|||+|.|.+.. ....|.
T Consensus 23 ~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~ 102 (147)
T 2enp_A 23 LLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLL 102 (147)
T ss_dssp TTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEE
T ss_pred CCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEEEeChHHhccCEEE
Confidence 3467899999999999984 43 3589999999985 356799999999999999999999753 235799
Q ss_pred EEEEEcCCCCCCceeEEEEEEcccC--CCcccEEEEecCC
Q 009822 78 VTIYDWDIIWKSTVLGSVIVTVESE--GQTGAVWYTLDSP 115 (524)
Q Consensus 78 v~v~d~d~~~~d~~iG~~~i~l~~~--~~~~~~w~~L~~~ 115 (524)
|+|||++.++++++||++.++|.++ ......|+.|.++
T Consensus 103 ~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~~ 142 (147)
T 2enp_A 103 LTVVDFDKFSRHCVIGKVSVPLCEVDLVKGGHWWKALIPS 142 (147)
T ss_dssp EEEECCSTTCCSCCCEEEEEETTTSCTTTCCCEEECCBCC
T ss_pred EEEEECCCCcCCcEEEEEEEechhcCCCCCccEEEEeecC
Confidence 9999999999999999999999988 3445789999864
No 34
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.64 E-value=2.3e-15 Score=148.82 Aligned_cols=147 Identities=20% Similarity=0.345 Sum_probs=113.5
Q ss_pred CCceEEEEEEEEeecCcCCCCCCCCCcEEEEEEC---CeEEeeeeecCCCCCccccEEEEEecC---CCcEEEEEEEEcC
Q 009822 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITCG---SEKRFSSMVPGSRYPMWGEEFNFSVDE---LPVQIIVTIYDWD 84 (524)
Q Consensus 11 ~~~~~L~V~vi~A~~L~~~d~~g~~dpyv~v~~~---~~~~~T~~~~~t~nP~W~e~f~f~v~~---~~~~L~v~v~d~d 84 (524)
...+.|.|+|++|++|++++..|.+||||++.++ ....+|+++++++||.|||+|.|.+.. ....|.|+|||+|
T Consensus 16 ~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~~V~d~d 95 (284)
T 2r83_A 16 FQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYDFD 95 (284)
T ss_dssp TTTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGGCTTCEEEEEEEECC
T ss_pred CCCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHHhCcCEEEEEEEECC
Confidence 4568999999999999999999999999999985 346789999999999999999999753 2467999999999
Q ss_pred CCCCCceeEEEEEEcccC--CCcccEEEEecCC-------CCeeEEEEEEEeccccccccccCccccccccc-ccccCCC
Q 009822 85 IIWKSTVLGSVIVTVESE--GQTGAVWYTLDSP-------SGQVCLHIKTIKLPVNASRVMNGYAGANARRR-ASLDKQG 154 (524)
Q Consensus 85 ~~~~d~~iG~~~i~l~~~--~~~~~~w~~L~~~-------~G~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 154 (524)
.++++++||++.++|..+ +.....|++|.+. .|++.+.+.+.+.. . ..... +++..+.
T Consensus 96 ~~~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~~G~i~l~l~~~p~~----~--------~l~v~v~~a~~L~ 163 (284)
T 2r83_A 96 RFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEEQEKLGDICFSLRYVPTA----G--------KLTVVILEAKNLK 163 (284)
T ss_dssp SSSCCCEEEEEEEEGGGCCCSSCEEEEEECBCCSSCCCCCCCEEEEEEEEETTT----T--------EEEEEEEEEESCC
T ss_pred CCCCCceeEEEEEcchhcccCCcceeEEEeeccccccccccccEEEEEEecCcC----C--------ceEEEEEEeECCC
Confidence 999999999999999998 4556899999652 36776666554211 0 01111 1344566
Q ss_pred Ccccccccccccccc
Q 009822 155 PTVVHQKPGPLQTIF 169 (524)
Q Consensus 155 ~~~~~~k~~~f~~~F 169 (524)
+.+..+.+++|-++.
T Consensus 164 ~~d~~~~~dpyv~v~ 178 (284)
T 2r83_A 164 KMDVGGLSDPYVKIH 178 (284)
T ss_dssp CCSTTSCCCEEEEEE
T ss_pred CcCCCCCcCeEEEEE
Confidence 666666677776665
No 35
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.60 E-value=6.8e-15 Score=146.51 Aligned_cols=149 Identities=17% Similarity=0.248 Sum_probs=112.5
Q ss_pred CCceEEEEEEEEeecCcCCCCCCCCCcEEEEEE---CCeEEeeeeecCCCCCccccEEEEEecCC---CcEEEEEEEEcC
Q 009822 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITC---GSEKRFSSMVPGSRYPMWGEEFNFSVDEL---PVQIIVTIYDWD 84 (524)
Q Consensus 11 ~~~~~L~V~vi~A~~L~~~d~~g~~dpyv~v~~---~~~~~~T~~~~~t~nP~W~e~f~f~v~~~---~~~L~v~v~d~d 84 (524)
...+.|.|+|++|++|+.+|..|.+||||++++ +....+|+++++++||.|||+|.|.+... ...|.|+|||+|
T Consensus 17 ~~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d 96 (296)
T 1dqv_A 17 YGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYDFD 96 (296)
T ss_dssp SSSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEEEEEECC
T ss_pred CCCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEEEEEEEcC
Confidence 456899999999999999999999999999998 46678999999999999999999998532 347999999999
Q ss_pred CCCCCceeEEEEEE-cccC---CCcccEEEEecCC------CCeeEEEEEEEeccccccccccCccccccccc-ccccCC
Q 009822 85 IIWKSTVLGSVIVT-VESE---GQTGAVWYTLDSP------SGQVCLHIKTIKLPVNASRVMNGYAGANARRR-ASLDKQ 153 (524)
Q Consensus 85 ~~~~d~~iG~~~i~-l~~~---~~~~~~w~~L~~~------~G~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 153 (524)
.++++++||++.++ +.++ ......|++|... .|++.+.+.+.+.. ...... +++..+
T Consensus 97 ~~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~vsl~y~~~~------------~~l~v~v~~a~~L 164 (296)
T 1dqv_A 97 RFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGGSEKADLGELNFSLCYLPTA------------GLLTVTIIKASNL 164 (296)
T ss_dssp SSSCCCEEEEEECCCTTGGGSSCSSCCCCEECBCCSSCCSCCCEEEEEEEEETTT------------TEEEEEEEEEESC
T ss_pred CCCCCceEEEEEeccccccccCCccceeeeccccccccccccceEEEEEEecccc------------ceeEEEEEEeecC
Confidence 99999999999995 4333 4456789999652 37777666554211 011111 134556
Q ss_pred CCcccccccccccccccc
Q 009822 154 GPTVVHQKPGPLQTIFNL 171 (524)
Q Consensus 154 ~~~~~~~k~~~f~~~F~l 171 (524)
.+.+..+++++|-++.-.
T Consensus 165 ~~~d~~g~~Dpyv~v~l~ 182 (296)
T 1dqv_A 165 KAMDLTGFSDPYVKASLI 182 (296)
T ss_dssp CCCSSSSCCCEEEEECCC
T ss_pred CccCCCCCCCcEEEEEEE
Confidence 666666777887776633
No 36
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.58 E-value=2.4e-15 Score=131.02 Aligned_cols=85 Identities=16% Similarity=0.316 Sum_probs=73.3
Q ss_pred CceEEEEEEEEeecCcCCCCCCCCCcEEEEEECCeEEeeeeec-CCCCCccccEEEEEecCCCcEEEEEEEEcCCCCCCc
Q 009822 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVP-GSRYPMWGEEFNFSVDELPVQIIVTIYDWDIIWKST 90 (524)
Q Consensus 12 ~~~~L~V~vi~A~~L~~~d~~g~~dpyv~v~~~~~~~~T~~~~-~t~nP~W~e~f~f~v~~~~~~L~v~v~d~d~~~~d~ 90 (524)
+.+.|+|+|++|++|.. .|.+||||++. .+..+|++++ +++||.|||+|.|.+......|.|+|||+| +++|+
T Consensus 3 ~~~~L~V~V~~A~~l~~---~g~~DPYv~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~~dd 76 (131)
T 2cjt_A 3 VMSLLCVGVKKAKFDGA---QEKFNTYVTLK--VQNVKSTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LIWDT 76 (131)
T ss_dssp CCEEEEEEEEEEECSSC---GGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEEECCCSSEEEEEEEECC-SSCEE
T ss_pred cceEEEEEEEEeECCCC---CCCcCeEEEEE--ecCEEEeEecCCCCCceECCEEEEEEeCCCCeEEEEEEECC-CCCCC
Confidence 45899999999998853 67899999999 3344555554 689999999999999877778999999999 88999
Q ss_pred eeEEEEEEcccC
Q 009822 91 VLGSVIVTVESE 102 (524)
Q Consensus 91 ~iG~~~i~l~~~ 102 (524)
+||++.++|.++
T Consensus 77 ~iG~~~i~l~~l 88 (131)
T 2cjt_A 77 MVGTVWIPLRTI 88 (131)
T ss_dssp EEEEEEEEGGGS
T ss_pred eEEEEEEEHHHh
Confidence 999999999987
No 37
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.57 E-value=2e-14 Score=153.08 Aligned_cols=113 Identities=21% Similarity=0.320 Sum_probs=98.2
Q ss_pred CceEEEEEEEEeecCcCCCCCCCCCcEEEEEECCeEEeeeeecCCCCCccccEEEEEec--CCCcEEEEEEEEcCCCCCC
Q 009822 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVPGSRYPMWGEEFNFSVD--ELPVQIIVTIYDWDIIWKS 89 (524)
Q Consensus 12 ~~~~L~V~vi~A~~L~~~d~~g~~dpyv~v~~~~~~~~T~~~~~t~nP~W~e~f~f~v~--~~~~~L~v~v~d~d~~~~d 89 (524)
..+.|.|+|++|++|+. |..|.+||||++++++...+|+++++++||.|||+|.|.+. .....|.|+|||+|..++|
T Consensus 392 ~~~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~~~~d 470 (540)
T 3nsj_A 392 GLAHLVVSNFRAEHLWG-DYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWDD 470 (540)
T ss_dssp TEEEEEEEEEEEESCCC-SSCSCCCEEEEEEETTEEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCSSSCC
T ss_pred cccEEEEEEEEccCCCc-ccCCCcCeEEEEEECCEeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCCCCCC
Confidence 36799999999999998 99999999999999998999999999999999999999853 3567799999999999999
Q ss_pred ceeEEEEEEcccCCCcccEEEEecCCCCeeEEEEEEEecc
Q 009822 90 TVLGSVIVTVESEGQTGAVWYTLDSPSGQVCLHIKTIKLP 129 (524)
Q Consensus 90 ~~iG~~~i~l~~~~~~~~~w~~L~~~~G~i~~~l~~~~~~ 129 (524)
|+||.+.++|.. .....|++|. +|.+.+.+.+.-.+
T Consensus 471 D~LG~~~~~L~~--g~~~~~~~l~--~G~l~~~~~~~c~p 506 (540)
T 3nsj_A 471 DLLGSCDRSPHS--GFHEVTCELN--HGRVKFSYHAKCLP 506 (540)
T ss_dssp EEEEEEEECCCS--EEEEEEEECS--SSEEEEEEEEEECT
T ss_pred CEEEEEEEEeeC--CcEEEEEEcC--CeEEEEEEEEEECC
Confidence 999999999984 2346788875 69988888766544
No 38
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.56 E-value=2.1e-14 Score=153.81 Aligned_cols=116 Identities=21% Similarity=0.339 Sum_probs=101.5
Q ss_pred CCceEEEEEEEEeecCcCCCCCCCCCcEEEEEECCeEEeeeeecCCCCCccccEEEEEecCCC-cEEEEEEEEcCCCCCC
Q 009822 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVPGSRYPMWGEEFNFSVDELP-VQIIVTIYDWDIIWKS 89 (524)
Q Consensus 11 ~~~~~L~V~vi~A~~L~~~d~~g~~dpyv~v~~~~~~~~T~~~~~t~nP~W~e~f~f~v~~~~-~~L~v~v~d~d~~~~d 89 (524)
...+.|.|+|++|++|+++|..|.+||||++.+++..++|+++++++||.|||+|.|.+.... ..|.|+|||+|.+++|
T Consensus 384 ~~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~~~~ 463 (510)
T 3jzy_A 384 SGIGRLMVHVIEATELKACKPNGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQFSPD 463 (510)
T ss_dssp --CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSSSSC
T ss_pred CCCceEEEEeceeecCCCCCCCCCCCeEEEEEECCeeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCCCCC
Confidence 446899999999999999999999999999999999999999999999999999999986544 6699999999999999
Q ss_pred ceeEEEEEEcccCC------CcccEEEEecC-CCCeeEEEEEEE
Q 009822 90 TVLGSVIVTVESEG------QTGAVWYTLDS-PSGQVCLHIKTI 126 (524)
Q Consensus 90 ~~iG~~~i~l~~~~------~~~~~w~~L~~-~~G~i~~~l~~~ 126 (524)
++||.+.+++.++. .....|++|.+ ..|++.+.+.+.
T Consensus 464 d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~~~G~i~l~~~l~ 507 (510)
T 3jzy_A 464 DFLGRTEIPVAKIRTEQESKGPMTRRLLLHEVPTGEVWVRFDLQ 507 (510)
T ss_dssp CEEEEEEEEHHHHHHHHHHHCSCCEEEECBSSSSCEEEEEEEEE
T ss_pred CceEEEEEEHHHhccccCCCCceeeeecCCCCCCceEEEEEEEE
Confidence 99999999999872 12678999976 569988877654
No 39
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.56 E-value=2e-14 Score=130.42 Aligned_cols=86 Identities=16% Similarity=0.300 Sum_probs=74.3
Q ss_pred CCceEEEEEEEEeecCcCCCCCCCCCcEEEEEECCeEEeeeeec-CCCCCccccEEEEEecCCCcEEEEEEEEcCCCCCC
Q 009822 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVP-GSRYPMWGEEFNFSVDELPVQIIVTIYDWDIIWKS 89 (524)
Q Consensus 11 ~~~~~L~V~vi~A~~L~~~d~~g~~dpyv~v~~~~~~~~T~~~~-~t~nP~W~e~f~f~v~~~~~~L~v~v~d~d~~~~d 89 (524)
+..+.|.|+|++|++|. ..|.+||||+++ .+..+|++++ +++||.|||+|.|.+......|.|+|||+| +++|
T Consensus 11 g~~~~L~V~V~~A~~l~---~~g~~DPYV~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~~d 84 (167)
T 2cjs_A 11 GILSLLCVGVKKAKFDG---AQEKFNTYVTLK--VQNVESTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LIWD 84 (167)
T ss_dssp SCCCEEEEEEEEEECSS---CGGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEECCCTTSEEEEEEEECC-SSCC
T ss_pred CceEEEEEEEEEEECCC---CCCCCCeEEEEE--ecceEEEEecCCCCCCCCCCEEEEEeeCCCCEEEEEEEECC-CCCC
Confidence 34679999999999884 367899999999 3345666665 689999999999999877778999999999 8899
Q ss_pred ceeEEEEEEcccC
Q 009822 90 TVLGSVIVTVESE 102 (524)
Q Consensus 90 ~~iG~~~i~l~~~ 102 (524)
++||++.|+|.++
T Consensus 85 d~iG~~~i~L~~l 97 (167)
T 2cjs_A 85 TMVGTVWIPLRTI 97 (167)
T ss_dssp EEEEEEEEEGGGS
T ss_pred ceEEEEEEEHHHh
Confidence 9999999999987
No 40
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.47 E-value=3.1e-13 Score=133.50 Aligned_cols=103 Identities=33% Similarity=0.480 Sum_probs=87.2
Q ss_pred CceEEEEEEEEeecCcCCCCCCCCCcEEEEEEC--C---eEEeeeeecCCCCCccccEEEEEecCC---CcEEEEEEEEc
Q 009822 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITCG--S---EKRFSSMVPGSRYPMWGEEFNFSVDEL---PVQIIVTIYDW 83 (524)
Q Consensus 12 ~~~~L~V~vi~A~~L~~~d~~g~~dpyv~v~~~--~---~~~~T~~~~~t~nP~W~e~f~f~v~~~---~~~L~v~v~d~ 83 (524)
..+.|.|+|++|++|+.++..|.+||||++.+. + ...+|+++++++||.|||+|.|.+... ...|.|+|||+
T Consensus 148 ~~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~ 227 (284)
T 2r83_A 148 TAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDY 227 (284)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEEEEEEC
T ss_pred cCCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCceEEEEEEEeC
Confidence 456899999999999999999999999999984 2 356899999999999999999998643 34699999999
Q ss_pred CCCCCCceeEEEEEEcccC--------------CCcccEEEEecC
Q 009822 84 DIIWKSTVLGSVIVTVESE--------------GQTGAVWYTLDS 114 (524)
Q Consensus 84 d~~~~d~~iG~~~i~l~~~--------------~~~~~~w~~L~~ 114 (524)
+.++++++||++.+++... +....+|++|.+
T Consensus 228 d~~~~~~~iG~~~i~l~~~~~~~~~w~~~~~~~~~~~~~W~~L~~ 272 (284)
T 2r83_A 228 DKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQV 272 (284)
T ss_dssp CSSSCCCEEEEEEEETTCCHHHHHHHHHHHHSTTSCEEEEEECBC
T ss_pred CCCCCCcEEEEEEECCCCCCcHHHHHHHHHHCCCCchheeeecCC
Confidence 9999999999999999863 233457888765
No 41
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.45 E-value=1e-12 Score=113.45 Aligned_cols=112 Identities=14% Similarity=0.249 Sum_probs=92.2
Q ss_pred CCceEEEEEEEEeecCcCCCCCCCCCcEEEEEECCeEEeeeeec-CCCCCccccEEEEEecC---CCcEEEEEEEEcCCC
Q 009822 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVP-GSRYPMWGEEFNFSVDE---LPVQIIVTIYDWDII 86 (524)
Q Consensus 11 ~~~~~L~V~vi~A~~L~~~d~~g~~dpyv~v~~~~~~~~T~~~~-~t~nP~W~e~f~f~v~~---~~~~L~v~v~d~d~~ 86 (524)
++.--|+|+|.+|.+|+ |++|||+++.+.+.+++|++++ ++.||.|||.|.|++.. ....|.|.|||++++
T Consensus 18 ~~~msL~V~l~~a~~Lp-----g~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~v 92 (144)
T 3l9b_A 18 GSHMALIVHLKTVSELR-----GRADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSKV 92 (144)
T ss_dssp -CCEEEEEEEEEEESCC-----SCEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECTT
T ss_pred CCcEEEEEEEEEecCCC-----CCCCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECccc
Confidence 45567999999999997 5889999999999999999998 69999999999999864 356699999999999
Q ss_pred CCCceeEEEEEEcccC--CCcccEEEEecCCC-----CeeEEEEEEEe
Q 009822 87 WKSTVLGSVIVTVESE--GQTGAVWYTLDSPS-----GQVCLHIKTIK 127 (524)
Q Consensus 87 ~~d~~iG~~~i~l~~~--~~~~~~w~~L~~~~-----G~i~~~l~~~~ 127 (524)
+++++||.+.++|.++ ......+.+|.+.+ +.|.++|++.+
T Consensus 93 ~~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~n~~~~~a~I~l~l~Y~p 140 (144)
T 3l9b_A 93 FSNKLIGTFRMVLQKVVEENRVEVSDTLIDDNNAIIKTSLSMEVRYQA 140 (144)
T ss_dssp SCCEEEEEEEEESHHHHHHSEEEEEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred cCCCEEEEEEEEhHHhccCCeEEEeecccCCCCCccccEEEEEEEecC
Confidence 9999999999999988 33444566776644 44555555554
No 42
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.42 E-value=3.7e-13 Score=147.69 Aligned_cols=105 Identities=20% Similarity=0.356 Sum_probs=93.5
Q ss_pred CCCceEEEEEEEEeecCcC---CCCCCCCCcEEEEEEC---CeEEeeeeecCCCCCccccEEEEEecC-CCcEEEEEEEE
Q 009822 10 TNSAYLIKLELLAAKNLIG---ANLNGTSDPYAIITCG---SEKRFSSMVPGSRYPMWGEEFNFSVDE-LPVQIIVTIYD 82 (524)
Q Consensus 10 ~~~~~~L~V~vi~A~~L~~---~d~~g~~dpyv~v~~~---~~~~~T~~~~~t~nP~W~e~f~f~v~~-~~~~L~v~v~d 82 (524)
....+.|.|+|++|++|+. +|..|.+||||++++. ...++|+++++++||.|||+|.|.+.. ....|.|+|||
T Consensus 14 ~~~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D 93 (749)
T 1cjy_A 14 HQYSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMD 93 (749)
T ss_dssp CCCCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEE
T ss_pred CCCccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEE
Confidence 3567999999999999998 8888999999999997 467899999999999999999999976 45679999999
Q ss_pred cCCCCCCceeEEEEEEcccC--CCcccEEEEecCC
Q 009822 83 WDIIWKSTVLGSVIVTVESE--GQTGAVWYTLDSP 115 (524)
Q Consensus 83 ~d~~~~d~~iG~~~i~l~~~--~~~~~~w~~L~~~ 115 (524)
+|.++ |++||++.++|.++ +.....|++|.+.
T Consensus 94 ~D~~~-ddfIG~v~I~L~~L~~g~~~~~w~~L~~~ 127 (749)
T 1cjy_A 94 ANYVM-DETLGTATFTVSSMKVGEKKEVPFIFNQV 127 (749)
T ss_dssp CCSSS-CEEEEEECCBSTTSCTTCCCCEEEEETTT
T ss_pred CCCCC-CceeEEEEEEHHHcCCCCceEEEEecCCC
Confidence 99998 99999999999988 4456899999863
No 43
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.40 E-value=3e-12 Score=139.29 Aligned_cols=108 Identities=20% Similarity=0.282 Sum_probs=93.6
Q ss_pred CCceEEEEEEEEeecCcCCCC--CCCCCcEEEEEECC-----eEEeeeeecCC-CCCccccEEEEEecCCC-cEEEEEEE
Q 009822 11 NSAYLIKLELLAAKNLIGANL--NGTSDPYAIITCGS-----EKRFSSMVPGS-RYPMWGEEFNFSVDELP-VQIIVTIY 81 (524)
Q Consensus 11 ~~~~~L~V~vi~A~~L~~~d~--~g~~dpyv~v~~~~-----~~~~T~~~~~t-~nP~W~e~f~f~v~~~~-~~L~v~v~ 81 (524)
...+.|.|+|++|++|+..+. .|.+||||++.+.+ .+.+|++++++ +||.|||+|.|.+..+. ..|+|+||
T Consensus 494 ~~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~ 573 (624)
T 1djx_A 494 WRPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVE 573 (624)
T ss_dssp CCCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEE
T ss_pred ccceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEE
Confidence 367899999999999999884 68999999999843 57799999987 99999999999986543 57999999
Q ss_pred EcCCCCCCceeEEEEEEcccCCCcccEEEEecCCCCee
Q 009822 82 DWDIIWKSTVLGSVIVTVESEGQTGAVWYTLDSPSGQV 119 (524)
Q Consensus 82 d~d~~~~d~~iG~~~i~l~~~~~~~~~w~~L~~~~G~i 119 (524)
|+|.++++++||++.++|..+..+ .+|++|....|+.
T Consensus 574 D~D~~~~dd~iG~~~ipl~~L~~G-~r~v~L~d~~g~~ 610 (624)
T 1djx_A 574 DYDSSSKNDFIGQSTIPWNSLKQG-YRHVHLLSKNGDQ 610 (624)
T ss_dssp ECCSSSCCEEEEEEEEEGGGBCCE-EEEEEEECTTSCE
T ss_pred EcCCCCCCceeEEEEEEHHHcCCC-cEEEeCCCCCcCC
Confidence 999999999999999999999654 4699998877664
No 44
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.36 E-value=8.5e-14 Score=138.52 Aligned_cols=102 Identities=26% Similarity=0.398 Sum_probs=86.7
Q ss_pred CceEEEEEEEEeecCcCCCCCCCCCcEEEEEEC--C---eEEeeeeecCCCCCccccEEEEEecCC---CcEEEEEEEEc
Q 009822 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITCG--S---EKRFSSMVPGSRYPMWGEEFNFSVDEL---PVQIIVTIYDW 83 (524)
Q Consensus 12 ~~~~L~V~vi~A~~L~~~d~~g~~dpyv~v~~~--~---~~~~T~~~~~t~nP~W~e~f~f~v~~~---~~~L~v~v~d~ 83 (524)
..+.|.|+|++|++|+.+|..|.+||||++++. + .+++|+++++++||.|||+|.|.+... ...|.|+|||+
T Consensus 150 ~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~ 229 (296)
T 1dqv_A 150 TAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVDY 229 (296)
T ss_dssp TTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCCEEEEC
T ss_pred ccceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHHccCcEEEEEEEeC
Confidence 467899999999999999999999999999985 2 457899999999999999999988643 34699999999
Q ss_pred CCCCCCceeEEEEEEcccCCC-cccEEEEec
Q 009822 84 DIIWKSTVLGSVIVTVESEGQ-TGAVWYTLD 113 (524)
Q Consensus 84 d~~~~d~~iG~~~i~l~~~~~-~~~~w~~L~ 113 (524)
+.++++++||.+.|++..+.. ...+|+.+.
T Consensus 230 d~~~~~~~iG~~~i~l~~~~~~~~~~W~~~~ 260 (296)
T 1dqv_A 230 DCIGHNEVIGVCRVGPEAADPHGREHWAEML 260 (296)
T ss_dssp CSSSCCEEEEECCCSSCTTCHHHHHHHHTSS
T ss_pred CCCCCCceEEEEEECCccCCchhHHHHHHHH
Confidence 999999999999999987744 445555554
No 45
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.26 E-value=2.9e-13 Score=143.52 Aligned_cols=100 Identities=21% Similarity=0.288 Sum_probs=16.2
Q ss_pred CCCCceEEEEEEEEeecCcCCCCCCCCCcEEEEEECCe-EEeeeeecCC---CCCccccEEEEEecCCCcEEEEEEEEc-
Q 009822 9 QTNSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSE-KRFSSMVPGS---RYPMWGEEFNFSVDELPVQIIVTIYDW- 83 (524)
Q Consensus 9 ~~~~~~~L~V~vi~A~~L~~~d~~g~~dpyv~v~~~~~-~~~T~~~~~t---~nP~W~e~f~f~v~~~~~~L~v~v~d~- 83 (524)
+.+..+.|.|+|++|++|+++| ||||.+++++. ..+|++++++ +||.|||+|.|.+......|.|+|||.
T Consensus 6 ~~r~~~~L~V~VieAk~L~~~d-----dpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~~~~L~v~V~d~~ 80 (483)
T 3bxj_A 6 SRRVDNVLKLWIIEARELPPKK-----RYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPAVRALRLHLYRDS 80 (483)
T ss_dssp EEEEEECC--------------------------------------------------CCEECC----------------
T ss_pred cceeccEEEEEEEEcCCcCCCC-----CCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCCCccEEEEEEEecC
Confidence 3456788999999999999877 99999999765 4689999998 999999999998654457799999994
Q ss_pred C---CCCCCceeEEEEEEcccC--CCcccEEEEec
Q 009822 84 D---IIWKSTVLGSVIVTVESE--GQTGAVWYTLD 113 (524)
Q Consensus 84 d---~~~~d~~iG~~~i~l~~~--~~~~~~w~~L~ 113 (524)
| ..++|++||.+.|++..+ +...+.||+|.
T Consensus 81 d~~~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~ 115 (483)
T 3bxj_A 81 DKKRKKDKAGYVGLVTVPVATLAGRHFTEQWYPVT 115 (483)
T ss_dssp --------------------------CCEECC---
T ss_pred CccccCCCCceEEEEEEEHHHhcCCCCCCeEEECC
Confidence 5 367899999999999988 45678999994
No 46
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.20 E-value=2.5e-11 Score=134.19 Aligned_cols=103 Identities=27% Similarity=0.489 Sum_probs=91.0
Q ss_pred ceEEEEEEEEeecCcCCCCCCCCCcEEEEEE-----CCeEEeeeeecCCCCCccccEEEEEecC--CCcEEEEEEEEcCC
Q 009822 13 AYLIKLELLAAKNLIGANLNGTSDPYAIITC-----GSEKRFSSMVPGSRYPMWGEEFNFSVDE--LPVQIIVTIYDWDI 85 (524)
Q Consensus 13 ~~~L~V~vi~A~~L~~~d~~g~~dpyv~v~~-----~~~~~~T~~~~~t~nP~W~e~f~f~v~~--~~~~L~v~v~d~d~ 85 (524)
.+.|.|++++|++|.++|..|.+||||++.+ ...+.+|+++++++||.|||+|.|.+.. ....|.|+|||+|.
T Consensus 171 ~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d~ 250 (674)
T 3pfq_A 171 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL 250 (674)
T ss_dssp SSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECCS
T ss_pred cceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeeccc
Confidence 4678999999999999999999999999998 4456799999999999999999999853 35669999999999
Q ss_pred CCCCceeEEEEEEcccC-CCcccEEEEecCC
Q 009822 86 IWKSTVLGSVIVTVESE-GQTGAVWYTLDSP 115 (524)
Q Consensus 86 ~~~d~~iG~~~i~l~~~-~~~~~~w~~L~~~ 115 (524)
.++|++||.+.+++.++ ......|+.|...
T Consensus 251 ~~~dd~iG~~~i~l~~l~~~~~~~w~~Lls~ 281 (674)
T 3pfq_A 251 TSRNDFMGSLSFGISELQKAGVDGWFKLLSQ 281 (674)
T ss_dssp SSCCEECCBCCCBTTHHHHCCEEEEEECBCT
T ss_pred ccccccccccccchhhhccCCcccceeeccc
Confidence 99999999999999988 4456899999763
No 47
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=98.95 E-value=7.2e-09 Score=114.99 Aligned_cols=98 Identities=14% Similarity=0.196 Sum_probs=80.9
Q ss_pred ceEEEEEEEEeecCcCCCCCCCCCcEEEEEECC-------eEEeeeeecC-CCCCccccE-EEEE-ecCC-CcEEEEEEE
Q 009822 13 AYLIKLELLAAKNLIGANLNGTSDPYAIITCGS-------EKRFSSMVPG-SRYPMWGEE-FNFS-VDEL-PVQIIVTIY 81 (524)
Q Consensus 13 ~~~L~V~vi~A~~L~~~d~~g~~dpyv~v~~~~-------~~~~T~~~~~-t~nP~W~e~-f~f~-v~~~-~~~L~v~v~ 81 (524)
.+.|.|+|++|++|+.. .+||||++.+.+ .+++|+++++ ++||.|||+ |.|. +..+ -..|+|+||
T Consensus 649 ~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~ 724 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVS 724 (816)
T ss_dssp CEEEEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEE
T ss_pred ceEEEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEE
Confidence 57899999999999753 689999999853 5678999875 699999998 9998 6433 356999999
Q ss_pred EcCCCCCCceeEEEEEEcccCCCcccEEEEecCCCCee
Q 009822 82 DWDIIWKSTVLGSVIVTVESEGQTGAVWYTLDSPSGQV 119 (524)
Q Consensus 82 d~d~~~~d~~iG~~~i~l~~~~~~~~~w~~L~~~~G~i 119 (524)
|++ ++|||++.++|..+..+ .++++|.++.|+.
T Consensus 725 D~d----ddfiG~~~ipL~~L~~G-yR~vpL~~~~g~~ 757 (816)
T 3qr0_A 725 EEN----GKFIGHRVMPLDGIKPG-YRHVPLRNESNRP 757 (816)
T ss_dssp ETT----SCEEEEEEEESTTCCCE-EEEEEEECTTSCE
T ss_pred ecC----CCeeeEEEEEHHHcCCc-ceEEEEeCCCCCC
Confidence 985 78999999999999765 4678998776663
No 48
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=98.91 E-value=8.8e-09 Score=114.92 Aligned_cols=98 Identities=17% Similarity=0.267 Sum_probs=79.6
Q ss_pred CceEEEEEEEEeecCcCCCCCCCCCcEEEEEECC------eEEeeeeecC-CCCCcccc-EEEEE-ecCC-CcEEEEEEE
Q 009822 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITCGS------EKRFSSMVPG-SRYPMWGE-EFNFS-VDEL-PVQIIVTIY 81 (524)
Q Consensus 12 ~~~~L~V~vi~A~~L~~~d~~g~~dpyv~v~~~~------~~~~T~~~~~-t~nP~W~e-~f~f~-v~~~-~~~L~v~v~ 81 (524)
....|.|+|++|++|+.. .+||||++.+.+ .+++|+++++ ++||.||| +|.|. +..+ ...|+|+||
T Consensus 723 ~~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~ 798 (885)
T 3ohm_B 723 VANALRVKVISGQFLSDR----KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAF 798 (885)
T ss_dssp CCEEEEEEEEEEESCCSS----CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEE
T ss_pred cceEEEEEEEEeccCccc----CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEE
Confidence 356899999999999753 689999999843 2468999976 59999999 69998 6432 346999999
Q ss_pred EcCCCCCCceeEEEEEEcccCCCcccEEEEecCCCCe
Q 009822 82 DWDIIWKSTVLGSVIVTVESEGQTGAVWYTLDSPSGQ 118 (524)
Q Consensus 82 d~d~~~~d~~iG~~~i~l~~~~~~~~~w~~L~~~~G~ 118 (524)
|+| ++|||++.++|..+..+ .++++|.++.|+
T Consensus 799 D~d----ddfiG~~~lpL~~L~~G-yR~vpL~~~~g~ 830 (885)
T 3ohm_B 799 EEG----GKFVGHRILPVSAIRSG-YHYVCLRNEANQ 830 (885)
T ss_dssp ETT----TEEEEEEEEETTTCCCE-EEEEEEECTTSC
T ss_pred cCC----ccEEeeEEEEHHHcCCC-ceEEEecCCCCC
Confidence 987 78999999999999765 457889876665
No 49
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=98.91 E-value=1e-08 Score=114.27 Aligned_cols=99 Identities=16% Similarity=0.208 Sum_probs=80.4
Q ss_pred CCceEEEEEEEEeecCcCCCCCCCCCcEEEEEECC------eEEeee-eec-CCCCCcccc-EEEE-EecCC-CcEEEEE
Q 009822 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGS------EKRFSS-MVP-GSRYPMWGE-EFNF-SVDEL-PVQIIVT 79 (524)
Q Consensus 11 ~~~~~L~V~vi~A~~L~~~d~~g~~dpyv~v~~~~------~~~~T~-~~~-~t~nP~W~e-~f~f-~v~~~-~~~L~v~ 79 (524)
...+.|.|+|++|++|+. +.+||||.+.+.+ .+++|+ +++ +++||.||| +|.| .+..+ -..|+|+
T Consensus 675 ~~~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~ 750 (799)
T 2zkm_X 675 VVATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVA 750 (799)
T ss_dssp TTCEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEE
T ss_pred eeeeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEE
Confidence 346899999999999985 4689999999832 356899 776 469999999 6999 77533 3469999
Q ss_pred EEEcCCCCCCceeEEEEEEcccCCCcccEEEEecCCCCe
Q 009822 80 IYDWDIIWKSTVLGSVIVTVESEGQTGAVWYTLDSPSGQ 118 (524)
Q Consensus 80 v~d~d~~~~d~~iG~~~i~l~~~~~~~~~w~~L~~~~G~ 118 (524)
|||+| +++||++.++|..+..+ .+|++|....|.
T Consensus 751 V~D~d----~d~iG~~~ipl~~L~~G-~r~v~L~~~~g~ 784 (799)
T 2zkm_X 751 VMEEG----NKFLGHRIIPINALNSG-YHHLCLHSESNM 784 (799)
T ss_dssp EEETT----TEEEEEEEEEGGGBCCE-EEEEEEECTTCC
T ss_pred EEEeC----CCccceEeeehhhcCCC-cEEEeccCCCCC
Confidence 99987 78999999999999654 568999876665
No 50
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.82 E-value=9.8e-08 Score=79.89 Aligned_cols=108 Identities=13% Similarity=0.208 Sum_probs=82.4
Q ss_pred ceEEEEEEEEeecCcCCCCCCCCCcEEEEEECCeE----Eee-eeecCCCCCccccEEEEEecCCCcEEEEEEEEcCCCC
Q 009822 13 AYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEK----RFS-SMVPGSRYPMWGEEFNFSVDELPVQIIVTIYDWDIIW 87 (524)
Q Consensus 13 ~~~L~V~vi~A~~L~~~d~~g~~dpyv~v~~~~~~----~~T-~~~~~t~nP~W~e~f~f~v~~~~~~L~v~v~d~d~~~ 87 (524)
...|+|.+.++.--.-+......||||.+.++... .+| .+.++|..|.||+.|.-.+.+ .+.|.|.|++...
T Consensus 5 ~~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~-Gr~l~i~Vfh~a~-- 81 (126)
T 1yrk_A 5 APFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYE-GRVIQIVLMRAAE-- 81 (126)
T ss_dssp CCEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCT-TCEEEEEEEEETT--
T ss_pred CccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeC-CEEEEEEEEcCCC--
Confidence 46788888776532211223468999999986332 244 667789999999999999876 7889999997554
Q ss_pred CCceeEEEEEEcccC-------CCcccEEEEecCCCCeeEEEEEEE
Q 009822 88 KSTVLGSVIVTVESE-------GQTGAVWYTLDSPSGQVCLHIKTI 126 (524)
Q Consensus 88 ~d~~iG~~~i~l~~~-------~~~~~~w~~L~~~~G~i~~~l~~~ 126 (524)
+|++.|+|++.++ +...+.|+.|++ .|++.+.++++
T Consensus 82 --~fvAn~tV~~edL~~~c~~~~g~~e~WvdLeP-~Gkl~~~i~~~ 124 (126)
T 1yrk_A 82 --EPVSEVTVGVSVLAERCKKNNGKAEFWLDLQP-QAKVLMSVQYF 124 (126)
T ss_dssp --EEEEEEEEEHHHHHHHHHTTTTEEEEEEECBS-SCEEEEEEEEE
T ss_pred --CeeeEEEEEHHHHHhhhccCCCceEEEEeccc-CcEEEEEEEEe
Confidence 8999999999977 234578999997 89999888865
No 51
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.74 E-value=1.3e-07 Score=80.27 Aligned_cols=113 Identities=11% Similarity=0.239 Sum_probs=86.0
Q ss_pred CCCCceEEEEEEEEeecCcCCC-CCCCCCcEEEEEECCe----EEee-eeecCCCCCccccEEEEEecCCCcEEEEEEEE
Q 009822 9 QTNSAYLIKLELLAAKNLIGAN-LNGTSDPYAIITCGSE----KRFS-SMVPGSRYPMWGEEFNFSVDELPVQIIVTIYD 82 (524)
Q Consensus 9 ~~~~~~~L~V~vi~A~~L~~~d-~~g~~dpyv~v~~~~~----~~~T-~~~~~t~nP~W~e~f~f~v~~~~~~L~v~v~d 82 (524)
++.-.+.|+|.+.++.-.+-+. .....||||.+.++.. ..+| .+.++|..|.||+.|.-.+.+ .+.|.|.|++
T Consensus 5 ~~~m~~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~-Gr~l~i~Vfh 83 (138)
T 2enj_A 5 SSGMSPFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINK-GRVMQIIVKG 83 (138)
T ss_dssp CSSCCCCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCS-SCEEEEEEEC
T ss_pred ccccCcceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEEC-CeEEEEEEEc
Confidence 3455678999997776433221 1336899999998643 2456 666778999999999998876 7889999996
Q ss_pred cCCCCCCceeEEEEEEcccC-------CCcccEEEEecCCCCeeEEEEEEEe
Q 009822 83 WDIIWKSTVLGSVIVTVESE-------GQTGAVWYTLDSPSGQVCLHIKTIK 127 (524)
Q Consensus 83 ~d~~~~d~~iG~~~i~l~~~-------~~~~~~w~~L~~~~G~i~~~l~~~~ 127 (524)
... +|++.++|++.++ +...+.|+.|++ .|++++.+++..
T Consensus 84 ~a~----~fVAn~tV~~edL~~~ck~~~g~~e~WvdLeP-~Gkl~v~i~~~~ 130 (138)
T 2enj_A 84 KNV----DLISETTVELYSLAERCRKNNGKTEIWLELKP-QGRMLMNARYFL 130 (138)
T ss_dssp SSC----SCCEEEEEESHHHHHHHHHTTTCEEEEEECBS-SCEEEEEEEECC
T ss_pred CCC----CeeeEEEEEHHHHHhhhccCCCceEEEEeccc-CcEEEEEEEEEE
Confidence 443 8999999999987 234578999997 899999888763
No 52
>2hth_B Vacuolar protein sorting protein 36; GLUE domain, PH domain, viral budding, ubiquitin complex, protein transport; 2.70A {Homo sapiens} SCOP: b.55.1.12 PDB: 2dx5_A
Probab=95.36 E-value=0.12 Score=44.41 Aligned_cols=91 Identities=13% Similarity=0.168 Sum_probs=56.6
Q ss_pred eeeEEEeecceEEEEeccCcceeEEEEeccccccccccccceecCcEEEEEecCCCCCCCCCCCCCCCceeEEEeeeec-
Q 009822 191 YHGRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQHAFINPAITIILRMGAGGHGVPPLGSPDGRVRYKFASFWN- 269 (524)
Q Consensus 191 ~~Gr~yit~~~~cF~s~~~g~~~~~~i~~~~i~~i~k~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~f~sf~~- 269 (524)
-.|++|+|.++|||....- ....+.|||..|..++.....+ ..+.+|++...+...+..+-...-....++-.+|..
T Consensus 38 k~G~l~LTshRli~~d~~~-~~~s~~lpl~~v~~~e~~~~~f-~~s~Ki~l~l~~~~~~~~~gp~~~s~~~~~kLsFr~G 115 (140)
T 2hth_B 38 DAGTLLLSTHRLIWRDQKN-HECCMAILLSQIVFIEEQAAGI-GKSAKIVVHLHPAPPNKEPGPFQSSKNSYIKLSFKEH 115 (140)
T ss_dssp CCEEEEEESSEEEEEETTC-CSCCEEEEGGGEEEEEEECCTT-SSCCEEEEEECCCCCCSSSCCCSTTSCCEEEEEETTS
T ss_pred cCCEEEEecCEEEEecCCC-CceEEEEEhHHeeeeeeecccc-ccCceEEEEecCCCccCCCCCcccccCcEEEEEEcCC
Confidence 5699999999999987543 4578999999999999988764 334555555433222211111011123566667754
Q ss_pred -hHHHHHHHHHHHHh
Q 009822 270 -RNHALRQLQRTAKN 283 (524)
Q Consensus 270 -rd~~~~~l~~~~~~ 283 (524)
.++-+..|.+.++.
T Consensus 116 g~~eF~~~L~~al~~ 130 (140)
T 2hth_B 116 GQIEFYRRLSEEMTQ 130 (140)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHH
Confidence 34555666655544
No 53
>2cay_A VPS36 PH domain, vacuolar protein sorting protein 36; transport, ESCRT-II, lipid-binding, multivesicular bodies, membrane; 1.9A {Saccharomyces cerevisiae} SCOP: b.55.1.12
Probab=93.79 E-value=0.21 Score=43.16 Aligned_cols=84 Identities=15% Similarity=0.205 Sum_probs=55.2
Q ss_pred ceeeEEEeecceEEEEeccCcceeEEEEeccccccccccccceecCcEEEEEecCCCCCCCCCCCCCCCceeEEEeeeec
Q 009822 190 LYHGRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQHAFINPAITIILRMGAGGHGVPPLGSPDGRVRYKFASFWN 269 (524)
Q Consensus 190 ~~~Gr~yit~~~~cF~s~~~g~~~~~~i~~~~i~~i~k~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~f~sf~~ 269 (524)
.-.|++|+|..+|||-...-.....+.+||..|.+++.....+ ..+++|++...++. .+ ..++-.+|..
T Consensus 50 ~k~G~lyLTshRIIyv~~~~~~~~SfslPL~~v~~~e~~~~~f-g~s~Ki~l~~~p~~---------~~-~~~~KLsFk~ 118 (145)
T 2cay_A 50 RQRGRIFLTSQRIIYIDDAKPTQNSLGLELDDLAYVNYSSGFL-TRSPRLILFFKDPS---------SS-TEFVQLSFRK 118 (145)
T ss_dssp CSSEEEEEESSEEEEEESSCHHHHCEEEEGGGEEEEEEECSSS-SSSCEEEEEESSCS---------ST-TCCEEEEESS
T ss_pred CCccEEEEEcCeEEEecCCCCcceEEEeEhHheeeeeEEcCcc-ccCceEEEEecCCC---------CC-ceEEEEEEcC
Confidence 4569999999999998654433378999999999999988764 33567776543321 11 2334445543
Q ss_pred h--HHHHHHHHHHHHhh
Q 009822 270 R--NHALRQLQRTAKNY 284 (524)
Q Consensus 270 r--d~~~~~l~~~~~~~ 284 (524)
- ++-+..|.+.|++.
T Consensus 119 GGa~eF~~~l~~al~~~ 135 (145)
T 2cay_A 119 SDGVLFSQATERALENI 135 (145)
T ss_dssp SCCHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHH
Confidence 2 55556666666553
No 54
>1em2_A MLN64 protein; beta barrel, lipid binding protein; HET: TAR; 2.20A {Homo sapiens} SCOP: d.129.3.2
Probab=93.23 E-value=0.76 Score=42.67 Aligned_cols=149 Identities=11% Similarity=0.100 Sum_probs=77.8
Q ss_pred eeeeEEecCHHHHHHHHcCCCCchHHHHHHHcCCcceEeccccccCCCCCcEEEEEEEeec---cCCCCCceeeEeEEEE
Q 009822 339 IYNDVFPCTAEQFFTLLFSDDSKFTNEYRAARKDSNLVMGQWHAADEYDGQVREVAFRSLC---KSPIYPRDTAMTESQH 415 (524)
Q Consensus 339 ~~~~~~~~s~~~lf~~lf~d~s~f~~~~~~~~~~~~i~~~~W~~~~~~~~~~R~~~y~~~~---~~~~gpk~~~~~~~Q~ 415 (524)
-+..+++++++++|+.++.| .. .+..+|-.+......+..+..+ .+.|..-. ..++.|+.-- ..+
T Consensus 69 k~~~~v~~~~~~v~~~~~~d-~~-------~r~~Wd~~~~~~~vle~~~~~t-~I~~~~~~p~~~~~~~~RDfv---~~r 136 (229)
T 1em2_A 69 ILKTFLPCPAELVYQEVILQ-PE-------RMVLWNKTVTACQILQRVEDNT-LISYDVSAGAAGGVVSPRDFV---NVR 136 (229)
T ss_dssp EEEEEESSCHHHHHHHTTTC-HH-------HHTTTCTTEEEEEEEEEETTTE-EEEEEEECCBTTTTBCCEEEE---EEE
T ss_pred EEEEEecCCHHHHHHHHHhC-cc-------chhhcccccceEEEEEecCCCe-EEEEEEecCcCCCCcCCCeeE---EEE
Confidence 34667899999999666653 11 2232222121221111111122 24444321 1234444321 122
Q ss_pred EEecCCCCeEEEEEEEeeCCCCCCCeE-E---EEEEEEEEeeC--CCCeEEEEEEEEEEeeeceeeeeeeccHHHHHHHH
Q 009822 416 AVLSPDKKIFVFETVQQAHDVPFGSYF-E---IHGRWHLETIA--ENSSTIDIKVGAHFKKWCVIQFKIKTGAVNKYKKE 489 (524)
Q Consensus 416 ~~~~~~~~~~vv~~~~~~~dVPygd~F-~---v~~r~~i~~~~--~~~c~l~v~~~V~f~K~t~~K~~Ie~~~~~~~~~~ 489 (524)
.....++.++++..+..-+.+|-...| + ....|+|.+.+ ++.|+|.....+...+| +-+.++.+.+...+.
T Consensus 137 ~~~~~~~~~vi~~~Sv~~~~~P~~~~~VR~~~~~~g~~i~p~~~~~~~t~vt~~~~~Dp~G~-iP~~l~n~~~~~~~~-- 213 (229)
T 1em2_A 137 RIERRRDRYLSSGIATSHSAKPPTHKYVRGENGPGGMIVLKSASNPRVCTFVWILNTDLKGR-LPRYLIHQSLAATMF-- 213 (229)
T ss_dssp EEEECSSEEEEEEEECCCTTSCCCTTSEECEECSEEEEEEECSSCTTCEEEEEEECEECCSS-SCHHHHHHHHHHHHH--
T ss_pred EEEEcCCEEEEEEecccCCCCCCCCCCEeeeecccEEEEEecCCCCCcEEEEEEEEECCCCC-CCHHHHHHHHHHHHH--
Confidence 222224556666666667778854332 2 34679999875 57899999999988775 334555554444444
Q ss_pred HHHHHHHHHHHHhhc
Q 009822 490 VELMLETARSYIKIC 504 (524)
Q Consensus 490 ~~~~~~~~~~~l~~~ 504 (524)
.+++.+++.++..
T Consensus 214 --~~~~~Lr~~~~~~ 226 (229)
T 1em2_A 214 --EFAFHLRQRISEL 226 (229)
T ss_dssp --HHHHHHHHHHHHT
T ss_pred --HHHHHHHHHHHHh
Confidence 4445555555544
No 55
>3p0l_A Steroidogenic acute regulatory protein, mitochond; structural genomics consortium, SGC, start domain, cholester transport, cholesterol; 3.40A {Homo sapiens}
Probab=93.06 E-value=0.44 Score=44.07 Aligned_cols=146 Identities=10% Similarity=0.074 Sum_probs=79.7
Q ss_pred eeeEEecCHHHHHHHHcCCCCchHHHHHHHcCCcceEeccccccCCCCCcEEEEEEEe-ec--cCCCCCceeeEeEEEEE
Q 009822 340 YNDVFPCTAEQFFTLLFSDDSKFTNEYRAARKDSNLVMGQWHAADEYDGQVREVAFRS-LC--KSPIYPRDTAMTESQHA 416 (524)
Q Consensus 340 ~~~~~~~s~~~lf~~lf~d~s~f~~~~~~~~~~~~i~~~~W~~~~~~~~~~R~~~y~~-~~--~~~~gpk~~~~~~~Q~~ 416 (524)
+..++++|++++|++|+.| .. .+..+|-.+......+..+..+ .+.|.. +- ..++.|+.--+ .+.
T Consensus 59 ~~~~v~~~~~~v~~~l~~d-~~-------~r~~Wd~~~~~~~vle~~~~~t-~I~y~~~~~~~~~~v~~RDfv~---~r~ 126 (221)
T 3p0l_A 59 LEVVVDQPMERLYEELVER-ME-------AMGEWNPNVKEIKVLQKIGKDT-FITHELAAEAAGNLVGPRDFVS---VRC 126 (221)
T ss_dssp EEEEESSCHHHHHHHHTTT-GG-------GTTTSCTTCSEEEEEEECSSSE-EEEEEEECC---CCSCCEEEEE---EEE
T ss_pred EEEEEcCCHHHHHHHHHhc-cc-------hhhhcCcchheEEEEEecCCCe-EEEEEeeccccCCccCCceEEE---EEE
Confidence 4567899999999999863 21 1232222222222111111223 344543 21 12445543222 111
Q ss_pred EecCCCCeEEEEEEEeeCCCCCCCe-EEE---EEEEEEEeeCCC--CeEEEEEEEEEEeeeceeeeeeeccHHHHHHHHH
Q 009822 417 VLSPDKKIFVFETVQQAHDVPFGSY-FEI---HGRWHLETIAEN--SSTIDIKVGAHFKKWCVIQFKIKTGAVNKYKKEV 490 (524)
Q Consensus 417 ~~~~~~~~~vv~~~~~~~dVPygd~-F~v---~~r~~i~~~~~~--~c~l~v~~~V~f~K~t~~K~~Ie~~~~~~~~~~~ 490 (524)
....++.++++..+..-+.+|-... -++ ...|+|++.+++ +|+|.....+...+| +-++++.+.+...+.+
T Consensus 127 ~~~~~~~~vi~~~Sv~~~~~P~~~g~VR~~~~~~g~~i~p~~~~~~~t~vt~~~~~Dp~G~-iP~~lvn~~~~~~~~~-- 203 (221)
T 3p0l_A 127 AKRRGSTCVLAGMATDFGNMPEQKGVIRAEHGPTCMVLHPLAGSPSKTKLTWLLSIDLKGW-LPKSIINQVLSQTQVD-- 203 (221)
T ss_dssp EEECSSCEEECCEECCCTTSCCCTTSEECEECSCEEEEEEETTEEEEEEEEEEECEECCSS-CCHHHHHHHHHHHHHH--
T ss_pred EEEcCCeEEEEEEeccCCCCCCCCCeEEEeccceEEEEEECCCCCCcEEEEEEEEecCCCC-CCHHHHHHHHHHHHHH--
Confidence 2223455666656666677776443 333 467999999865 899999999988766 4455555554455444
Q ss_pred HHHHHHHHHHHh
Q 009822 491 ELMLETARSYIK 502 (524)
Q Consensus 491 ~~~~~~~~~~l~ 502 (524)
+++.+++.++
T Consensus 204 --~~~~Lr~~~~ 213 (221)
T 3p0l_A 204 --FANHLRKRLE 213 (221)
T ss_dssp --HHHHHHHHTC
T ss_pred --HHHHHHHHHh
Confidence 4555555555
No 56
>2pcs_A Conserved protein; structural genomics, unknown function, ligand binding, PSI-2 structure initiative; HET: UNL; 2.40A {Geobacillus kaustophilus} SCOP: d.129.3.10
Probab=93.02 E-value=2.2 Score=36.71 Aligned_cols=144 Identities=10% Similarity=0.014 Sum_probs=74.0
Q ss_pred ceeeeeEEecCHHHHHHHHcCCCCchHHHHHHHcCCcceEeccccccCCCCCcEEEEEEEeeccCCCCCceeeEeEEEEE
Q 009822 337 VGIYNDVFPCTAEQFFTLLFSDDSKFTNEYRAARKDSNLVMGQWHAADEYDGQVREVAFRSLCKSPIYPRDTAMTESQHA 416 (524)
Q Consensus 337 ~~~~~~~~~~s~~~lf~~lf~d~s~f~~~~~~~~~~~~i~~~~W~~~~~~~~~~R~~~y~~~~~~~~gpk~~~~~~~Q~~ 416 (524)
+.-...+++.|++++|.++-+ ...+.+++- +...+.. .++ +.. .+... ..+||-.......-++
T Consensus 4 ~i~~~~~i~ap~e~Vw~~l~D--~e~~~~w~p--~~~~~~~-----~~~-~~~----~~~~~--~~~g~~~~~~~~~~~~ 67 (162)
T 2pcs_A 4 NGNGSIELKGTVEEVWSKLMD--PSILSKCIM--GCKSLEL-----IGE-DKY----KADLQ--IGIAAVKGKYDAIIEV 67 (162)
T ss_dssp EEEEEEEEESCHHHHHHHHTC--HHHHHHHST--TEEEEEE-----EET-TEE----EEEEE--ECCGGGCEEEEEEEEE
T ss_pred EEeeEEEecCCHHHHHHHhcC--HHHHHhhCC--CceEeEE-----eCC-CeE----EEEEE--EEeeeEEEEEEEEEEE
Confidence 344567899999999999843 444554432 1111211 111 211 12211 2234432222222122
Q ss_pred EecCCCCeEEEEEEEeeCCCCCCCeEEEEEEEEEEeeCCCCeEEEEEEEEEEeee--ceeeeeeeccHHHHHHHHHHHHH
Q 009822 417 VLSPDKKIFVFETVQQAHDVPFGSYFEIHGRWHLETIAENSSTIDIKVGAHFKKW--CVIQFKIKTGAVNKYKKEVELML 494 (524)
Q Consensus 417 ~~~~~~~~~vv~~~~~~~dVPygd~F~v~~r~~i~~~~~~~c~l~v~~~V~f~K~--t~~K~~Ie~~~~~~~~~~~~~~~ 494 (524)
........+.+.....- + +..+.....|.|+..++++|+|.+...+.+... .++..++.. -.+...++++
T Consensus 68 ~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~l~~~~~~gT~v~~~~~~~~~g~l~~~~~~l~~~----~~~~~~~~~~ 139 (162)
T 2pcs_A 68 TDIKPPYHYKLLVNGEG-G---PGFVNAEGVIDLTPINDECTQLTYTYSAEVGGKVAAIGQRMLGG----VAKLLISDFF 139 (162)
T ss_dssp EEEETTTEEEEEEEEEE-T---TEEEEEEEEEEEEESSSSEEEEEEEEEEEEESGGGGGCHHHHHH----HHHHHHHHHH
T ss_pred EecCCCcEEEEEEEecC-C---CccEEEEEEEEEEecCCCcEEEEEEEEEEECCCHHHhhHHHHHH----HHHHHHHHHH
Confidence 22222346666554321 1 234467889999986667899999988887542 222222222 2334456677
Q ss_pred HHHHHHHhhc
Q 009822 495 ETARSYIKIC 504 (524)
Q Consensus 495 ~~~~~~l~~~ 504 (524)
+.+++.++..
T Consensus 140 ~~lk~~~e~~ 149 (162)
T 2pcs_A 140 KKIQKEIAKS 149 (162)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHhccc
Confidence 7777777643
No 57
>2ns9_A Hypothetical protein APE2225; uncharacterized conserved protein, structural genomics, PSI, structure initiative; 1.80A {Aeropyrum pernix} SCOP: d.129.3.10
Probab=91.46 E-value=5.2 Score=33.91 Aligned_cols=142 Identities=8% Similarity=-0.057 Sum_probs=72.6
Q ss_pred ceeeeeEEecCHHHHHHHHcCCCCchHHHHHHHcCCcceEeccccccCCCCCcEEEEEEEeeccCCCCCceeeEeEEEEE
Q 009822 337 VGIYNDVFPCTAEQFFTLLFSDDSKFTNEYRAARKDSNLVMGQWHAADEYDGQVREVAFRSLCKSPIYPRDTAMTESQHA 416 (524)
Q Consensus 337 ~~~~~~~~~~s~~~lf~~lf~d~s~f~~~~~~~~~~~~i~~~~W~~~~~~~~~~R~~~y~~~~~~~~gpk~~~~~~~Q~~ 416 (524)
..-...+++.|++++|.++-+ ...+.+++- +. ..+. ..+ + . +.+... ..+||-.......-++
T Consensus 14 ~i~~~~~i~ap~e~Vw~~l~D--~~~~~~w~p--~~-----~~~~-~~~-~-~---~~~~~~--~~~g~~~~~~~~~~~~ 76 (157)
T 2ns9_A 14 RYEGSFEVSKTPEEVFEFLTD--PKRFSRAFP--GF-----KSVE-VED-G-S---FTIELR--LSLGPLRGDARVRASF 76 (157)
T ss_dssp EEEEEEEESSCHHHHHHHHTC--HHHHGGGST--TE-----EEEE-EET-T-E---EEEEEE--EESSSSEEEEEEEEEE
T ss_pred EEeeEEEEcCCHHHHHHHHcC--HHHHHhhCC--Cc-----eEEE-ECC-C-E---EEEEEE--EEEcceeEEEEEEEEE
Confidence 345577899999999998843 333333321 11 1122 111 2 1 223322 2245533222222233
Q ss_pred EecCCCCeEEEEEEEeeCCCCCCCeEEEEEEEEEEeeCCCCeEEEEEEEEEEeeeceeeeeeeccHHHHHHHHHHHHHHH
Q 009822 417 VLSPDKKIFVFETVQQAHDVPFGSYFEIHGRWHLETIAENSSTIDIKVGAHFKKWCVIQFKIKTGAVNKYKKEVELMLET 496 (524)
Q Consensus 417 ~~~~~~~~~vv~~~~~~~dVPygd~F~v~~r~~i~~~~~~~c~l~v~~~V~f~K~t~~K~~Ie~~~~~~~~~~~~~~~~~ 496 (524)
........+++.... .+ .+..|.....|.++..+ ++|+|.+...+++... +..++..-...-....++++++.
T Consensus 77 ~~~~~~~~i~~~~~~--~~--~~~~~~~~~~~~l~~~~-~gT~v~~~~~~~~~g~--l~~~~~~~~~~~~~~~~~~~~~~ 149 (157)
T 2ns9_A 77 EDLEKPSKATVKGSG--RG--AGSTLDFTLRFAVEPSG-GGSRVSWVFEGNVGGL--AASMGGRVLDSLARRMINDVISG 149 (157)
T ss_dssp EEEETTTEEEEEEEE--EC--SSEEEEEEEEEEEEEET-TEEEEEEEEEEEEEEG--GGGSCHHHHHHHHHHHHHHHHHH
T ss_pred EecCCCcEEEEEEEe--cC--CCccEEEEEEEEEEeCC-CcEEEEEEEEEEECcC--HHHhhHHHHHHHHHHHHHHHHHH
Confidence 222233456654332 12 12357778899999987 7899999988887541 22222221122233356666666
Q ss_pred HHHHHh
Q 009822 497 ARSYIK 502 (524)
Q Consensus 497 ~~~~l~ 502 (524)
+++.++
T Consensus 150 lk~~~e 155 (157)
T 2ns9_A 150 VKRELG 155 (157)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 666654
No 58
>2r55_A STAR-related lipid transfer protein 5; alpha and beta protein, cholesterol binding, structural GENO structural genomics consortium, SGC; 2.50A {Homo sapiens}
Probab=90.73 E-value=1.7 Score=40.30 Aligned_cols=150 Identities=10% Similarity=-0.007 Sum_probs=79.0
Q ss_pred eeeeEEecCHHHHHHHH--cCCCCchHHHHHHHcCCcceEeccccccCCCCCcEEEEEEEeecc---CCCCCceeeEeEE
Q 009822 339 IYNDVFPCTAEQFFTLL--FSDDSKFTNEYRAARKDSNLVMGQWHAADEYDGQVREVAFRSLCK---SPIYPRDTAMTES 413 (524)
Q Consensus 339 ~~~~~~~~s~~~lf~~l--f~d~s~f~~~~~~~~~~~~i~~~~W~~~~~~~~~~R~~~y~~~~~---~~~gpk~~~~~~~ 413 (524)
-...+++++++++|+++ +. .....++........+. ...++ .+ .+.|..... .++.|+.--+..
T Consensus 70 k~~~~v~~~~~~v~~~l~~~d--~~~r~~Wd~~~~~~~vl----e~i~~---~~-~i~~~~~~~~~~~~v~~RDfv~~r- 138 (231)
T 2r55_A 70 RGEGIVYGTLEEVWDCVKPAV--GGLRVKWDENVTGFEII----QSITD---TL-CVSRTSTPSAAMKLISPRDFVDLV- 138 (231)
T ss_dssp EEEEEESSCHHHHHHHHCC----CCSHHHHCTTCSEEEEE----EECSS---SE-EEEEEECCCBTTTTBCCEEEEEEE-
T ss_pred EEEEEECCCHHHHHHHHHhhC--cchhhhhccccceeEEE----EEcCC---CE-EEEEEEeccccCCccCCCeEEEEE-
Confidence 34667899999999999 73 33333332222221111 11111 12 233432111 123333311111
Q ss_pred EEEEecCCCCeEEEEEEEeeCCCCCCCe-EEEE---EEEEEEeeC--CCCeEEEEEEEEEEeeeceeeeeeeccHHHHHH
Q 009822 414 QHAVLSPDKKIFVFETVQQAHDVPFGSY-FEIH---GRWHLETIA--ENSSTIDIKVGAHFKKWCVIQFKIKTGAVNKYK 487 (524)
Q Consensus 414 Q~~~~~~~~~~~vv~~~~~~~dVPygd~-F~v~---~r~~i~~~~--~~~c~l~v~~~V~f~K~t~~K~~Ie~~~~~~~~ 487 (524)
......++.++++..+..-+.+|-... -+++ ..|+|.+.. +++|+|.....++...|. -+.++.+.+..+
T Consensus 139 -~~~~~~~g~~vi~~~Sv~~~~~P~~~~~VR~~~~~~g~~i~p~~~~~~~t~vt~~~~~Dp~G~i-P~~lvn~~~~~~-- 214 (231)
T 2r55_A 139 -LVKRYEDGTISSNATHVEHPLCPPKPGFVRGFNHPCGCFCEPLPGEPTKTNLVTFFHTDLSGYL-PQNVVDSFFPRS-- 214 (231)
T ss_dssp -EEEECTTSCEEEEEEECCCTTSCCCTTCEEEEECSEEEEEEECC--CCCEEEEEEECEECCSSC-CHHHHHHHHHHH--
T ss_pred -EEEEcCCCEEEEEEEeccCCCCCCCCCCEEEEEEeeEEEEEEeCCCCCcEEEEEEEEeCCCCCc-cHHHHHHHHhHh--
Confidence 122234455666677766777875433 3443 468999875 678999999999887653 244555443334
Q ss_pred HHHHHHHHHHHHHHhhcC
Q 009822 488 KEVELMLETARSYIKICT 505 (524)
Q Consensus 488 ~~~~~~~~~~~~~l~~~~ 505 (524)
.-.+++.+++.++.++
T Consensus 215 --~~~~~~~Lr~~~~~~~ 230 (231)
T 2r55_A 215 --MTRFYANLQKAVKQFH 230 (231)
T ss_dssp --HHHHHHHHHHHHHGGG
T ss_pred --HHHHHHHHHHHHHHhc
Confidence 4556666666666654
No 59
>1ln1_A PC-TP, phosphatidylcholine transfer protein; start domain, lipid binding protein; HET: DLP; 2.40A {Homo sapiens} SCOP: d.129.3.2 PDB: 1ln2_A* 1ln3_A*
Probab=90.25 E-value=3.3 Score=37.64 Aligned_cols=149 Identities=12% Similarity=0.086 Sum_probs=79.2
Q ss_pred eeeeEEe-cCHHHHHHHHcCCCCchHHHHHHHcCCcceEeccccccCCCCCcEEEEEEEeeccCCCCCceeeEeEEEEEE
Q 009822 339 IYNDVFP-CTAEQFFTLLFSDDSKFTNEYRAARKDSNLVMGQWHAADEYDGQVREVAFRSLCKSPIYPRDTAMTESQHAV 417 (524)
Q Consensus 339 ~~~~~~~-~s~~~lf~~lf~d~s~f~~~~~~~~~~~~i~~~~W~~~~~~~~~~R~~~y~~~~~~~~gpk~~~~~~~Q~~~ 417 (524)
-...+++ ++++++|+++.. .....++........+. .. + + ...+.+....-.|+.++.--+... ...
T Consensus 55 k~~~~i~~~~~~~v~~~l~d--~~~r~~Wd~~~~~~~vl----e~--~-~--~~i~~~~~~~p~p~~~RD~v~~~~-~~~ 122 (214)
T 1ln1_A 55 KVFGVLEDCSPTLLADIYMD--SDYRKQWDQYVKELYEQ----EC--N-G--ETVVYWEVKYPFPMSNRDYVYLRQ-RRD 122 (214)
T ss_dssp EEEEEETTSCHHHHHHHHHC--HHHHHHHCTTEEEEEEE----EE--T-T--EEEEEEEECCCTTSCCEEEEEEEE-EEE
T ss_pred EEEEEECCCCHHHHHHHHcC--HHHHHHHHHHHhhEEEe----cc--C-C--CEEEEEEEEcCCCCCCceEEEEEE-EEe
Confidence 4577895 999999999875 23333333333322221 11 1 2 233333333223454443222111 112
Q ss_pred ecCCCC-e-EEEEEEEeeCCCCCCCeE----EEEEEEEEEeeCCCCeEEEEEEEEEEeeeceeeeeeeccHHHHHHHHHH
Q 009822 418 LSPDKK-I-FVFETVQQAHDVPFGSYF----EIHGRWHLETIAENSSTIDIKVGAHFKKWCVIQFKIKTGAVNKYKKEVE 491 (524)
Q Consensus 418 ~~~~~~-~-~vv~~~~~~~dVPygd~F----~v~~r~~i~~~~~~~c~l~v~~~V~f~K~t~~K~~Ie~~~~~~~~~~~~ 491 (524)
...++. . +++..+..-+++|-...| .....|+|++.++++|++.....+....+ +-+.++.+.+... ..
T Consensus 123 ~~~~g~~~~~i~~~Sv~~p~~P~~~~~VR~~~~~~~~~i~p~~~~~t~v~~~~~~Dp~G~-iP~~l~n~~~~~~----~~ 197 (214)
T 1ln1_A 123 LDMEGRKIHVILARSTSMPQLGERSGVIRVKQYKQSLAIESDGKKGSKVFMYYFDNPGGQ-IPSWLINWAAKNG----VP 197 (214)
T ss_dssp ECSTTCCEEEEEEEECCBTTBCCCTTSEEECCEEEEEEEEECSSSSEEEEEEEEECCSSC-CCHHHHHHHHHTH----HH
T ss_pred cccCCCeEEEEEEecccCCCCCCCCCcEEEEEEEEEEEEecCCCCceEEEEEEEECCCCc-ccHHHHHHHHHHH----hH
Confidence 222443 3 455555666778854433 35678999999888999999999887643 2333333333333 44
Q ss_pred HHHHHHHHHHhhc
Q 009822 492 LMLETARSYIKIC 504 (524)
Q Consensus 492 ~~~~~~~~~l~~~ 504 (524)
.+++.+++.++.+
T Consensus 198 ~~l~~l~k~~~~y 210 (214)
T 1ln1_A 198 NFLKDMARACQNY 210 (214)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhc
Confidence 4555555555544
No 60
>3qsz_A STAR-related lipid transfer protein; structural genomics, PSI-biology; 2.39A {Xanthomonas axonopodis PV}
Probab=89.91 E-value=2.2 Score=38.07 Aligned_cols=143 Identities=10% Similarity=0.074 Sum_probs=73.4
Q ss_pred eeeeEEecCHHHHHHHHcCCCCchHHHHHHHcCCcceEeccccccCCCCCcEEEEEEEeeccCCCCCceeeEeEEEEEEe
Q 009822 339 IYNDVFPCTAEQFFTLLFSDDSKFTNEYRAARKDSNLVMGQWHAADEYDGQVREVAFRSLCKSPIYPRDTAMTESQHAVL 418 (524)
Q Consensus 339 ~~~~~~~~s~~~lf~~lf~d~s~f~~~~~~~~~~~~i~~~~W~~~~~~~~~~R~~~y~~~~~~~~gpk~~~~~~~Q~~~~ 418 (524)
-...+++.|++++|+++.. .....++...+....+... . ++ ...+.+....-.|+.++.. ........
T Consensus 30 k~~~~v~~s~~~v~~~l~D--~~~~~~W~~~~~~~~vle~----~---~~-~~i~y~~~~~p~p~~~RD~--v~~~~~~~ 97 (189)
T 3qsz_A 30 RGEVRLKAAADDVVKVLRD--ANAFRQWMPDVAASELLKA----T---DT-EQYHYLDNSAPWPVSNRDG--VYHFTYEK 97 (189)
T ss_dssp EEEEEESSCHHHHHHHHHC--GGGGGGTSTTEEEEEEEEE----C---SS-EEEEEEEECCSSSCCCEEE--EEEEEEEE
T ss_pred EEEEEEECCHHHHHHHHHh--HHHhhhHHHhcCEEEEEee----c---CC-ceEEEEEeecCCCcCCcce--EEEEEEEE
Confidence 4567889999999998754 3333333333332222211 1 11 2222222221123444321 11112223
Q ss_pred cCCCCeEEEEEEEeeCCCCCCCe----EEEEEEEEEEeeCCCCeEEEEEEEEEEeeeceeeeeeeccHHHHHHHHHHHHH
Q 009822 419 SPDKKIFVFETVQQAHDVPFGSY----FEIHGRWHLETIAENSSTIDIKVGAHFKKWCVIQFKIKTGAVNKYKKEVELML 494 (524)
Q Consensus 419 ~~~~~~~vv~~~~~~~dVPygd~----F~v~~r~~i~~~~~~~c~l~v~~~V~f~K~t~~K~~Ie~~~~~~~~~~~~~~~ 494 (524)
..++ .++|......+.+|-... ......|+|++ ++++|+|.....++...+ +-+.++.+.+.......++.+-
T Consensus 98 ~~~g-~~~i~~~~~~~~~P~~~~~VR~~~~~~~~~i~p-~~~~t~vt~~~~~dp~G~-iP~~lvn~~~~~~~~~~l~~L~ 174 (189)
T 3qsz_A 98 AGDG-AITVRVEAVPDYLPLRKGKVRIPRAKGQWTLVP-DADGVDVTYQMHASPGGS-IPSWLANQTVVETPFGTLKALR 174 (189)
T ss_dssp CTTS-CEEEEEEECTTSSCCCTTSEECCCEEEEEEEEE-CSSSEEEEEEEEECSCSS-SCHHHHHHTTTHHHHHHHHHHH
T ss_pred CCCC-eEEEEEEcCCCccCCCCCeEEeeEeeEEEEEEE-CCCeEEEEEEEEeCCCCC-CCHHHHHHHHHHHHHHHHHHHH
Confidence 3344 445544444455664322 23468899999 888999999999988653 3455555555555444444443
Q ss_pred HH
Q 009822 495 ET 496 (524)
Q Consensus 495 ~~ 496 (524)
+.
T Consensus 175 k~ 176 (189)
T 3qsz_A 175 SH 176 (189)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 61
>2pso_A STAR-related lipid transfer protein 13; alpha and beta protein, lipid binding, helix swapping, struc genomics, structural genomics consortium, SGC; 2.80A {Homo sapiens} SCOP: d.129.3.2
Probab=88.90 E-value=1.2 Score=41.85 Aligned_cols=80 Identities=6% Similarity=0.022 Sum_probs=51.4
Q ss_pred CCCCeEEEEEEEeeCCCCCCC---eEEEEEEEEEEeeCCCCeEEEEEEEEEEeeeceeeeeeeccHHHHHHHHHHHHHHH
Q 009822 420 PDKKIFVFETVQQAHDVPFGS---YFEIHGRWHLETIAENSSTIDIKVGAHFKKWCVIQFKIKTGAVNKYKKEVELMLET 496 (524)
Q Consensus 420 ~~~~~~vv~~~~~~~dVPygd---~F~v~~r~~i~~~~~~~c~l~v~~~V~f~K~t~~K~~Ie~~~~~~~~~~~~~~~~~ 496 (524)
.++.++++..+..-+++|-.+ .......|.|++.++++|+|.....+...+|. =..+ +.+.. ...-..+..
T Consensus 147 ~~g~~vi~~~Sv~h~~~P~~g~VR~~~~~~g~~i~P~~~~~t~vt~~~~~Dp~G~i--P~~l-n~~~~---~~~~~~l~~ 220 (237)
T 2pso_A 147 PKGMCTLVSLSVEHEEAQLLGGVRAVVMDSQYLIEPCGSGKSRLTHICRIDLKGHS--PEWY-SKGFG---HLCAAEVAR 220 (237)
T ss_dssp GGGCEEEEEEECCCTTCCCCSSEECCEEEEEEEEEECSTTCEEEEEEEEECCSSSC--TTTT-TTHHH---HHHHHHHHH
T ss_pred CCCEEEEEEEcccCCCCCCCCcEEEEEeccEEEEEECCCCCEEEEEEEEeCCCCCc--hHHH-HHHHH---HHHHHHHHH
Confidence 346677777676667888663 22346899999999999999999999887542 2223 33222 222345666
Q ss_pred HHHHHhhcC
Q 009822 497 ARSYIKICT 505 (524)
Q Consensus 497 ~~~~l~~~~ 505 (524)
+++.++...
T Consensus 221 LR~~~~~~~ 229 (237)
T 2pso_A 221 IRNSFQPLI 229 (237)
T ss_dssp HHHTTSCC-
T ss_pred HHHHHHhhc
Confidence 777766543
No 62
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=88.74 E-value=12 Score=34.39 Aligned_cols=55 Identities=11% Similarity=0.061 Sum_probs=39.8
Q ss_pred EeeeeecCCCCCccccEEEEEecC---CCcEEEEEEEEcCCC----CCCceeEEEEEEcccC
Q 009822 48 RFSSMVPGSRYPMWGEEFNFSVDE---LPVQIIVTIYDWDII----WKSTVLGSVIVTVESE 102 (524)
Q Consensus 48 ~~T~~~~~t~nP~W~e~f~f~v~~---~~~~L~v~v~d~d~~----~~d~~iG~~~i~l~~~ 102 (524)
.+|-+...+.+|.|+|++.+.+.. ....|.|++++...- ..+..+|.+.++|-..
T Consensus 79 ~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~~~ 140 (220)
T 3l4c_A 79 YKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLMRY 140 (220)
T ss_dssp EECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESBCT
T ss_pred EEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEcccC
Confidence 356777788999999999999864 244599999875421 1234678888887755
No 63
>2wql_A Major allergen DAU C 1; pathogenesis-related protein, plant defense; HET: P4C; 2.70A {Daucus carota} PDB: 2bk0_A
Probab=88.58 E-value=10 Score=32.81 Aligned_cols=144 Identities=14% Similarity=0.114 Sum_probs=79.0
Q ss_pred eeeEEecCHHHHHHHHcCCCCchHHHHH-HHcCCcceEeccccccCCCCCcEEEEEEEeeccCCCCCceeeEeEEEEEEe
Q 009822 340 YNDVFPCTAEQFFTLLFSDDSKFTNEYR-AARKDSNLVMGQWHAADEYDGQVREVAFRSLCKSPIYPRDTAMTESQHAVL 418 (524)
Q Consensus 340 ~~~~~~~s~~~lf~~lf~d~s~f~~~~~-~~~~~~~i~~~~W~~~~~~~~~~R~~~y~~~~~~~~gpk~~~~~~~Q~~~~ 418 (524)
.+-+.++|+++||+++..|...++.+.+ ...+..++ .+.|. .+..|.++|.. -|| ... .++++..
T Consensus 8 ~E~~~~v~a~kl~ka~v~d~~~l~Pk~~P~~iks~~v-eGdg~-----~Gsir~~t~~~-----g~~-~~~--~kErle~ 73 (154)
T 2wql_A 8 LEITSSVSAEKIFSGIVLDVDTVIPKAATGAYKSVEV-KGDGG-----AGTVRIITLPE-----GSP-ITT--MTVRTDA 73 (154)
T ss_dssp EEEEESSCHHHHHHHHTTTHHHHHHHHSTTTCSEEEE-ESSSS-----TTCEEEEECCT-----TCS-CCE--EEEEEEE
T ss_pred EEEEecCCHHHHHHHHhhcccccchhhcccceeEEEE-ECCCC-----CCeEEEEEEcC-----CCC-ceE--EEEEEEE
Confidence 3566789999999999886444444443 23333332 33332 35679888742 233 222 2355664
Q ss_pred -cCCCCeEEEEEEEeeCCCCCCCeEEEEEEEEEEeeCCCCeEEEEEEEEEEeeeceeeeeeeccHHHHHHHHHHHHHHHH
Q 009822 419 -SPDKKIFVFETVQQAHDVPFGSYFEIHGRWHLETIAENSSTIDIKVGAHFKKWCVIQFKIKTGAVNKYKKEVELMLETA 497 (524)
Q Consensus 419 -~~~~~~~vv~~~~~~~dVPygd~F~v~~r~~i~~~~~~~c~l~v~~~V~f~K~t~~K~~Ie~~~~~~~~~~~~~~~~~~ 497 (524)
..++..|.... .--|+.-..+=+......+.+.++++|.+.. .+.|.+-. -..+.-...+..++.+..+++.+
T Consensus 74 iD~~~~~~~y~i--ieGd~l~~~~~~~~~~ikv~p~~~ggsvvk~--t~~Y~~~~--~~~~~ee~~~~~~~~~~~~~Kai 147 (154)
T 2wql_A 74 VNKEALSYDSTV--IDGDILLGFIESIETHMVVVPTADGGSITKT--TAIFHTKG--DAVVPEENIKFADAQNTALFKAI 147 (154)
T ss_dssp EETTTTEEEEEE--EESGGGTTTEEEEEEEEEEEECTTSCEEEEE--EEEEEEST--TCCCCHHHHHHHHHHHHHHHHHH
T ss_pred EehhhCEEEEEE--EeccccccceEEEEEEEEEeeCCCCcEEEEE--EEEEEECC--CCCCCHHHHHHHHHHHHhHHHHH
Confidence 33343443332 3344432333344566777777777886554 46676521 11223333445566677788888
Q ss_pred HHHHhh
Q 009822 498 RSYIKI 503 (524)
Q Consensus 498 ~~~l~~ 503 (524)
+.+|-.
T Consensus 148 EayLla 153 (154)
T 2wql_A 148 EAYLIA 153 (154)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 888754
No 64
>1icx_A Protein LLR18A, LLPR10.1A; 7-stranded beta sheet, C-terminal helix, allergen; 1.95A {Lupinus luteus} SCOP: d.129.3.1 PDB: 1ifv_A
Probab=88.46 E-value=11 Score=32.35 Aligned_cols=147 Identities=8% Similarity=0.056 Sum_probs=82.3
Q ss_pred eeeeEEecCHHHHHHHHcCCCCchHHHHHHHcCCcceEeccccccCCCCCcEEEEEEEeeccCCCCCceeeEeEEEEEE-
Q 009822 339 IYNDVFPCTAEQFFTLLFSDDSKFTNEYRAARKDSNLVMGQWHAADEYDGQVREVAFRSLCKSPIYPRDTAMTESQHAV- 417 (524)
Q Consensus 339 ~~~~~~~~s~~~lf~~lf~d~s~f~~~~~~~~~~~~i~~~~W~~~~~~~~~~R~~~y~~~~~~~~gpk~~~~~~~Q~~~- 417 (524)
..+.+.++|++++|.++-.|-...+.+++......++..+.|. .+..|.++|. + |.....+ ++++.
T Consensus 6 ~~e~~i~a~a~kvw~~~~~d~~~~~pk~~~~i~s~~i~eG~g~-----~Gsir~~~~~-~-----G~~~~~~--kErl~~ 72 (155)
T 1icx_A 6 ENEQSSTVAPAKLYKALTKDSDEIVPKVIEPIQSVEIVEGNGG-----PGTIKKIIAI-H-----DGHTSFV--LHKLDA 72 (155)
T ss_dssp EEEEEESSCHHHHHHHHTTTHHHHHHHHSTTEEEEEEEESSSS-----TTCEEEEEEE-S-----SSSEEEE--EEEEEE
T ss_pred EEEEEecCCHHHHHHHHhcCcchhcchhhhhccEEEEEecCCC-----CCeEEEEEEe-c-----CCcceeE--EEEEEE
Confidence 4567889999999999863222234555544455555667762 2567999886 1 3222223 33444
Q ss_pred ecCCCCeEEEEEEEeeCCCCCCCeEEEEEEEEEEeeCCCCeEEEEEEEEEEeeeceeeeeeeccHHHHHHHHHHHHHHHH
Q 009822 418 LSPDKKIFVFETVQQAHDVPFGSYFEIHGRWHLETIAENSSTIDIKVGAHFKKWCVIQFKIKTGAVNKYKKEVELMLETA 497 (524)
Q Consensus 418 ~~~~~~~~vv~~~~~~~dVPygd~F~v~~r~~i~~~~~~~c~l~v~~~V~f~K~t~~K~~Ie~~~~~~~~~~~~~~~~~~ 497 (524)
...++..|..... . -|+.-...=+....|.+.+.++++|.+.. .++|.+..-. ..-...+..++.+..+++.+
T Consensus 73 ~D~~~~~~~y~ii-e-Gd~~~~~~~~~~~~~~v~~~~~~gs~v~w--~~~y~~~~~~---~~~~~~~~~~~~~~~~~k~i 145 (155)
T 1icx_A 73 IDEANLTYNYSII-G-GEGLDESLEKISYESKILPGPDGGSIGKI--NVKFHTKGDV---LSETVRDQAKFKGLGLFKAI 145 (155)
T ss_dssp EEGGGTEEEEEEE-E-ETTSCTTEEEEEEEEEEEECGGGCEEEEE--EEEEEESSSS---CCHHHHTTHHHHHHHHHHHH
T ss_pred EeccCCEEEEEEE-e-cCCCccceEEEEEEEEEEecCCCCEEEEE--EEEEEECCCC---CCHHHHHHHHHHHHHHHHHH
Confidence 3333444444332 2 23221123334566777777655676544 4556543211 22223334478899999999
Q ss_pred HHHHhhcC
Q 009822 498 RSYIKICT 505 (524)
Q Consensus 498 ~~~l~~~~ 505 (524)
+++|..+.
T Consensus 146 e~yll~~p 153 (155)
T 1icx_A 146 EGYVLAHP 153 (155)
T ss_dssp HHHHHHCT
T ss_pred HHHHHhCC
Confidence 99998774
No 65
>1zsq_A Myotubularin-related protein 2; protein-phospholipid complex, hydrolase; HET: PIB; 1.82A {Homo sapiens} SCOP: b.55.1.8 c.45.1.3 PDB: 1zvr_A*
Probab=87.78 E-value=2.6 Score=44.15 Aligned_cols=74 Identities=16% Similarity=0.156 Sum_probs=49.6
Q ss_pred ccCcccceEEeeeee-eee--ccceeeEEEeecceEEEEeccCcceeEEEEeccccccccccccc--ee--cCcEEEEEe
Q 009822 170 NLLPDEFVELSYSCV-IER--SFLYHGRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQHA--FI--NPAITIILR 242 (524)
Q Consensus 170 ~lp~~e~l~~~~~c~-l~~--~~~~~Gr~yit~~~~cF~s~~~g~~~~~~i~~~~i~~i~k~~~~--~~--~~~i~i~~~ 242 (524)
.|-++|.++....-. +.. .-...|.||+|+.+|.|.+..-.....+-||+.-|..|+|..+. .. ...|.|.++
T Consensus 8 ~lLpGE~i~~~~~~V~~~~~~~~~~~GtL~lTn~rLiF~~~~~~~~~~~~iPL~~I~~vek~~~~s~~~~~~~~l~I~CK 87 (528)
T 1zsq_A 8 PLLPGENIKDMAKDVTYICPFTGAVRGTLTVTNYRLYFKSMERDPPFVLDASLGVINRVEKIGGASSRGENSYGLETVCK 87 (528)
T ss_dssp CCCTTCCEEEEEEEEEEEETTTEEEEEEEEEESSEEEEEESSSSSCEEEEEEGGGEEEEEEECCTTCCSTTCSEEEEEET
T ss_pred ccCCCCeEEEecCCEEEeCCCCCceeEEEEEECCEEEEEccCCCccEEEEeeccceEEEEEcCCCCcCCCCCceEEEEcc
Confidence 455677666442221 111 23688999999999999986433345688999999999986532 11 126899986
Q ss_pred c
Q 009822 243 M 243 (524)
Q Consensus 243 ~ 243 (524)
+
T Consensus 88 D 88 (528)
T 1zsq_A 88 D 88 (528)
T ss_dssp T
T ss_pred C
Confidence 4
No 66
>1jss_A Stard4, cholesterol-regulated start protein 4; start domain, structural genomics, PSI, protein structure initiative; 2.20A {Mus musculus} SCOP: d.129.3.2
Probab=87.51 E-value=3.5 Score=37.96 Aligned_cols=146 Identities=8% Similarity=0.105 Sum_probs=72.5
Q ss_pred eeeeEEecCHHHHHHHHcCCCCchHHHHHHHcCCcceEeccccccCCCCCcEEEEEEEeeccCC--CCCceeeEeEEEEE
Q 009822 339 IYNDVFPCTAEQFFTLLFSDDSKFTNEYRAARKDSNLVMGQWHAADEYDGQVREVAFRSLCKSP--IYPRDTAMTESQHA 416 (524)
Q Consensus 339 ~~~~~~~~s~~~lf~~lf~d~s~f~~~~~~~~~~~~i~~~~W~~~~~~~~~~R~~~y~~~~~~~--~gpk~~~~~~~Q~~ 416 (524)
-+..++++|++++|++++... .-.++ +.++.. ....+..+..+..+-|..+...+ +.|+.--+.. ..
T Consensus 70 k~~~~v~~~~~~v~~~l~d~~--~r~~W-----d~~~~~--~~vle~id~~~~I~y~~~~~~~~~~v~~RDfv~~r--~~ 138 (224)
T 1jss_A 70 KAQGVMDDVVNNVIDHIRPGP--WRLDW-----DRLMTS--LDVLEHFEENCCVMRYTTAGQLLNIISPREFVDFS--YT 138 (224)
T ss_dssp EEEEEESSCHHHHHHHHSSST--THHHH-----CSSEEE--EEEEEECSTTEEEEEEEECCBTTTTBCCEEEEEEE--EE
T ss_pred EEEEEEeCCHHHHHHHHhCcc--ccccc-----ccceee--EEEEEEcCCCeEEEEEEcccccCCCCCCCeEEEEE--EE
Confidence 346778999999999997632 11221 111111 11111111223333333322111 3444321111 12
Q ss_pred EecCCCCeEEEEEEEeeCCCCCCCeEEEE---EEEEEEeeCC--CCeEEEEEEEEEEeeeceeeeeeeccHHHHHHHHHH
Q 009822 417 VLSPDKKIFVFETVQQAHDVPFGSYFEIH---GRWHLETIAE--NSSTIDIKVGAHFKKWCVIQFKIKTGAVNKYKKEVE 491 (524)
Q Consensus 417 ~~~~~~~~~vv~~~~~~~dVPygd~F~v~---~r~~i~~~~~--~~c~l~v~~~V~f~K~t~~K~~Ie~~~~~~~~~~~~ 491 (524)
... ++.++++..+..-++.| .++=+++ ..|+|++..+ ++|+|...+.+...+|. -++++.+.+... .-
T Consensus 139 ~~~-~~~~vi~~~Sv~hp~~~-~g~VR~~~~~~g~~i~p~~~~~~~t~vt~~~~~Dp~G~i-P~~lvn~~~~~~----~~ 211 (224)
T 1jss_A 139 VGY-EEGLLSCGVSVEWSETR-PEFVRGYNHPCGWFCVPLKDSPSQSLLTGYIQTDLRGMI-PQSAVDTAMAST----LA 211 (224)
T ss_dssp EEE-TTEEEEEEEECCCCCCC-TTSEECEECSEEEEEEEETTEEEEEEEEEEECEECCSCC-CHHHHHHHHHHH----HH
T ss_pred EEc-CCeEEEEEeeeecCCCC-CCCEEEEecccEEEEEEcCCCCCceEEEEEEEeCCCCCc-cHHHHHHHHHHh----HH
Confidence 223 33345544444446665 3555544 6799999865 48999988888887652 344454443333 34
Q ss_pred HHHHHHHHHHh
Q 009822 492 LMLETARSYIK 502 (524)
Q Consensus 492 ~~~~~~~~~l~ 502 (524)
.+++.+++.++
T Consensus 212 ~~~~~Lr~~~~ 222 (224)
T 1jss_A 212 NFYSDLRKGLR 222 (224)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHHHh
Confidence 44444555443
No 67
>1lw3_A Myotubularin-related protein 2; protein-phosphate complex, hydrolase; 2.30A {Homo sapiens} SCOP: b.55.1.8 c.45.1.3 PDB: 1m7r_A
Probab=87.13 E-value=2.9 Score=44.78 Aligned_cols=75 Identities=16% Similarity=0.138 Sum_probs=50.4
Q ss_pred cccCcccceEEeeeee-eee--ccceeeEEEeecceEEEEeccCcceeEEEEeccccccccccccc--ee--cCcEEEEE
Q 009822 169 FNLLPDEFVELSYSCV-IER--SFLYHGRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQHA--FI--NPAITIIL 241 (524)
Q Consensus 169 F~lp~~e~l~~~~~c~-l~~--~~~~~Gr~yit~~~~cF~s~~~g~~~~~~i~~~~i~~i~k~~~~--~~--~~~i~i~~ 241 (524)
|.+-++|.++....-. +.. .-.+.|.||||+.+|.|.+..-.....+-||+.-|..|+|..+. .. ...|.|.+
T Consensus 79 ~~LLPGE~v~~~~~~V~~~~p~~~~~~GtL~lTnyrLiF~~~~~~~~~~~~IPL~~I~~Iekv~g~s~~g~~~~~l~I~C 158 (657)
T 1lw3_A 79 PPLLPGENIKDMAKDVTYICPFTGAVRGTLTVTNYRLYFKSMERDPPFVLDASLGVINRVEKIGGASSRGENSYGLETVC 158 (657)
T ss_dssp CCCCTTCCEEEEEEEEEEEETTTEEEEEEEEEESSEEEEEESSSSSCEEEEEEGGGEEEEEEECCTTCCSTTCSEEEEEE
T ss_pred CccCCCeeEEEEeCCEEEecCCCCceeEEEEEECCEEEEEecCCCcceEEEecccceEEEEecCCCcccCCCCceEEEEe
Confidence 4556777776543221 111 23588999999999999986433345688999999999986432 11 12688998
Q ss_pred ec
Q 009822 242 RM 243 (524)
Q Consensus 242 ~~ 243 (524)
++
T Consensus 159 KD 160 (657)
T 1lw3_A 159 KD 160 (657)
T ss_dssp TT
T ss_pred cC
Confidence 64
No 68
>2qim_A PR10.2B; trans-zeatin, cytokinin, plant hormones, plant protein, PR-1 protein, pathogenesis-related protein, allergen; HET: ZEA; 1.35A {Lupinus luteus} PDB: 3e85_A* 1xdf_A* 2k7h_A
Probab=86.49 E-value=15 Score=31.65 Aligned_cols=147 Identities=10% Similarity=0.043 Sum_probs=82.7
Q ss_pred eeeeEEecCHHHHHHHHcCCCCchHHHHHHHcCCcceEeccccccCCCCCcEEEEEEEeeccCCCCCceeeEeEEEEEE-
Q 009822 339 IYNDVFPCTAEQFFTLLFSDDSKFTNEYRAARKDSNLVMGQWHAADEYDGQVREVAFRSLCKSPIYPRDTAMTESQHAV- 417 (524)
Q Consensus 339 ~~~~~~~~s~~~lf~~lf~d~s~f~~~~~~~~~~~~i~~~~W~~~~~~~~~~R~~~y~~~~~~~~gpk~~~~~~~Q~~~- 417 (524)
..+.+.++|++++|.++-.|-...+.+++...+..++..+.|. .+..|.++|. + |.....+ ++++.
T Consensus 7 ~~e~~i~a~a~kvw~~~~~d~~~~~pk~~~~i~s~~i~eGdgg-----~Gsir~~~~~-~-----g~~~~~~--kErl~~ 73 (158)
T 2qim_A 7 QDEYTSTIAPAKLYKALVTDADIIIPKAVETIQSVEIVEGNGG-----PGTIKKLTFI-E-----GGESKYV--LHKIEA 73 (158)
T ss_dssp EEEEEESSCHHHHHHHHTTTHHHHHHHHCTTEEEEEEEESSSS-----TTCEEEEEEE-E-----TTEEEEE--EEEEEE
T ss_pred EEEEEecCCHHHHHHHHhcCccchhhhHHhhCcEEEEEecCCC-----CCeEEEEEEc-C-----CCcceeE--EEEEEE
Confidence 4577899999999999863222234555544445555667762 2567999886 2 3222223 33444
Q ss_pred ecCCCCeEEEEEEEeeCCCCCCC-eEEEEEEEEEEeeCCCCeEEEEEEEEEEeeeceeeeeeeccHHHHHHHHHHHHHHH
Q 009822 418 LSPDKKIFVFETVQQAHDVPFGS-YFEIHGRWHLETIAENSSTIDIKVGAHFKKWCVIQFKIKTGAVNKYKKEVELMLET 496 (524)
Q Consensus 418 ~~~~~~~~vv~~~~~~~dVPygd-~F~v~~r~~i~~~~~~~c~l~v~~~V~f~K~t~~K~~Ie~~~~~~~~~~~~~~~~~ 496 (524)
...++..|..... . -++ ..+ .=+....|.+.+.++++|.+.. .++|.+.. -....-...+..++.+..+++.
T Consensus 74 ~D~~~~~~~y~ii-e-G~~-~~~~~~~~~~~~~v~~~~~~gs~v~w--t~~y~~~~--~~~~~~~~~~~~~~~~~~~~k~ 146 (158)
T 2qim_A 74 IDEANLGYNYSIV-G-GVG-LPDTIEKISFETKLVEGANGGSIGKV--TIKIETKG--DAQPNEEEGKAAKARGDAFFKA 146 (158)
T ss_dssp EEGGGTEEEEEEE-E-ESS-CCCSEEEEEEEEEEEECSTTCEEEEE--EEEEEEST--TCCCCHHHHHHHHHHHHHHHHH
T ss_pred EecCCCEEEEEEE-e-ccC-CccceEEEEEEEEEEecCCCCEEEEE--EEEEEECC--CCCCCHHHHHHHHHHHHHHHHH
Confidence 3333444444332 2 222 222 2334567777887666776554 45555421 1111222333457889999999
Q ss_pred HHHHHhhcC
Q 009822 497 ARSYIKICT 505 (524)
Q Consensus 497 ~~~~l~~~~ 505 (524)
++++|..+.
T Consensus 147 ie~yll~~p 155 (158)
T 2qim_A 147 IESYLSAHP 155 (158)
T ss_dssp HHHHHHHCS
T ss_pred HHHHHHhCc
Confidence 999998764
No 69
>2yf0_A Myotubularin-related protein 6; hydrolase; 2.65A {Homo sapiens}
Probab=85.91 E-value=1.4 Score=45.90 Aligned_cols=52 Identities=17% Similarity=0.208 Sum_probs=39.4
Q ss_pred cceeeEEEeecceEEEEeccCcceeEEEEeccccccccccccceecCcEEEEEec
Q 009822 189 FLYHGRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQHAFINPAITIILRM 243 (524)
Q Consensus 189 ~~~~Gr~yit~~~~cF~s~~~g~~~~~~i~~~~i~~i~k~~~~~~~~~i~i~~~~ 243 (524)
....|.||+|+.||.|.+. ....+-||+.-|..|+|.....-...|.|.+++
T Consensus 23 ~~~~GtL~lTn~~LiF~~~---~~~e~wi~~~~I~~VeK~~~~~~~~~l~I~CKD 74 (512)
T 2yf0_A 23 KSLTGTLYLTATHLLFIDS---HQKETWILHHHIASVEKLALTTSGCPLVIQCKN 74 (512)
T ss_dssp -CCEEEEEECSSEEEEEES---SSCEEEEEGGGEEEEEECCCBTTBEEEEEEETT
T ss_pred CceeEEEEEECCEEEEeCC---CCCceEecccceeEEEEecCCCCCceEEEEecC
Confidence 4678999999999999993 234578999999999987543212368888864
No 70
>1pfj_A TFIIH basal transcription factor complex P62 subunit; PH/PTB domain, structural proteomics in europe, spine, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.9 PDB: 2rnr_B
Probab=85.33 E-value=3.4 Score=33.41 Aligned_cols=93 Identities=15% Similarity=0.284 Sum_probs=59.1
Q ss_pred cccceEEeeeeeeeeccceeeEEEeecceEEEEeccCcceeEEEEeccccccccccccceecC--cEEEEEecCCCCCCC
Q 009822 173 PDEFVELSYSCVIERSFLYHGRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQHAFINP--AITIILRMGAGGHGV 250 (524)
Q Consensus 173 ~~e~l~~~~~c~l~~~~~~~Gr~yit~~~~cF~s~~~g~~~~~~i~~~~i~~i~k~~~~~~~~--~i~i~~~~~~~~~~~ 250 (524)
.+|.|+......+.+. .|.||++..+|-+-.+. +-.-.+.+++.+|...+-++.. .+ -++|..+.+
T Consensus 5 ~~~~ll~v~~v~yKK~---dGtL~l~~d~i~W~p~~-~~~~~vs~~~~~I~~qq~SP~~--k~KVqLqi~l~~~------ 72 (108)
T 1pfj_A 5 SEEVLLIVKKVRQKKQ---DGALYLMAERIAWAPEG-KDRFTISHMYADIKCQKISPEG--KAKIQLQLVLHAG------ 72 (108)
T ss_dssp SCCEEEEESCCBCSSC---BCEEEEETTEEEEECSS-SSSCSEEEETTTCCCEEECCSS--SSSCEEEEECSSS------
T ss_pred chheeEEehhheeecC---CceEEEEcceEEEccCC-CCCceEEEehhhhhcceeCCCC--CccEEEEEEEeCC------
Confidence 3455555555555432 39999999999988754 3566777899999986654433 22 456666532
Q ss_pred CCCCCCCCceeEEEeeee----chHHHHHHHHHHHHhh
Q 009822 251 PPLGSPDGRVRYKFASFW----NRNHALRQLQRTAKNY 284 (524)
Q Consensus 251 ~~~~~~~~~~~~~f~sf~----~rd~~~~~l~~~~~~~ 284 (524)
+...|.|++=. .||..=++|..++...
T Consensus 73 -------~~~~F~Ftn~~~a~~erd~VKd~L~~~l~~~ 103 (108)
T 1pfj_A 73 -------DTTNFHFSNESTAVKERDAVKDLLQQLLPKF 103 (108)
T ss_dssp -------CEEEEECCCSSCTTHHHHHHHHHHHHHHHHH
T ss_pred -------CceEEEEcCcHHHHHHHHHHHHHHHHHHHHH
Confidence 45566777642 2455557777776553
No 71
>1t77_A Lipopolysaccharide-responsive and beige-like anchor protein, CDC4-like protein; PH-beach domains, vesicle trafficking, signal transduction; 2.40A {Homo sapiens} SCOP: a.169.1.1 b.55.1.6 PDB: 1mi1_A
Probab=84.22 E-value=1.6 Score=44.12 Aligned_cols=68 Identities=19% Similarity=0.241 Sum_probs=49.2
Q ss_pred ceEEeeeeeeee-ccceeeEEEeecceEEEEecc----Cc----------ceeEEEEeccccccccccccceecCcEEEE
Q 009822 176 FVELSYSCVIER-SFLYHGRMYVSAWHICFHSNA----FS----------RQMKVIIPIGDIDEIQRSQHAFINPAITII 240 (524)
Q Consensus 176 ~l~~~~~c~l~~-~~~~~Gr~yit~~~~cF~s~~----~g----------~~~~~~i~~~~i~~i~k~~~~~~~~~i~i~ 240 (524)
.++-++.|.+.. .....|++.||...|+|.... +. ......+++++|..|-+..-.+-..||+|.
T Consensus 2 ~v~~~~~~~~i~p~~~~~G~l~it~~~iyF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~~Rryll~~~alEif 81 (414)
T 1t77_A 2 PVSLSTPAQLVAPSVVVKGTLSVTSSELYFEVDEEDPNFKKIDPKILAYTEGLHGKWLFTEIRSIFSRRYLLQNTALEIF 81 (414)
T ss_dssp CCSEEEEEEEECSSCEEEEEEEECSSEEEEEECTTCHHHHHSCHHHHHHCCCTTCEEEGGGEEEEEEEEETTEEEEEEEE
T ss_pred CEEEEEEEEEEeeecceeeEEEEeCCEEEEEeCCCcccccccccchhccccCcceEecchheeeeeeeeccCcceeEEEE
Confidence 456678888766 677899999999999999531 10 011236889999999876655434599999
Q ss_pred Eec
Q 009822 241 LRM 243 (524)
Q Consensus 241 ~~~ 243 (524)
+..
T Consensus 82 ~~~ 84 (414)
T 1t77_A 82 MAN 84 (414)
T ss_dssp ETT
T ss_pred EcC
Confidence 964
No 72
>4a8u_A Major pollen allergen BET V 1-J; PR-10 protein; 1.16A {Betula pendula} PDB: 4a8v_A* 4a87_A* 4a81_A* 4a80_A* 4a83_A* 4a86_A* 4a85_A* 4a88_A 4a8g_A* 1b6f_A 1btv_A 1bv1_A 1fsk_A 4a84_A* 1llt_A 1fm4_A* 3k78_A 1qmr_A
Probab=83.04 E-value=22 Score=30.70 Aligned_cols=149 Identities=11% Similarity=0.163 Sum_probs=82.7
Q ss_pred eeeeEEecCHHHHHHHHcCCCCchHHHHH-HHcCCcceEeccccccCCCCCcEEEEEEEeeccCCCCCceeeEeEEEEEE
Q 009822 339 IYNDVFPCTAEQFFTLLFSDDSKFTNEYR-AARKDSNLVMGQWHAADEYDGQVREVAFRSLCKSPIYPRDTAMTESQHAV 417 (524)
Q Consensus 339 ~~~~~~~~s~~~lf~~lf~d~s~f~~~~~-~~~~~~~i~~~~W~~~~~~~~~~R~~~y~~~~~~~~gpk~~~~~~~Q~~~ 417 (524)
-.+.+.++|++++|.++..|-...+.+.+ ...+..++..+.|. .+..|.++|. +-+| ... .++++.
T Consensus 6 ~~ei~i~a~a~kvw~~~~~d~~~l~pk~~P~~i~s~e~~eGdgg-----~Gsir~~~~~-----~g~~-~~~--~kErl~ 72 (159)
T 4a8u_A 6 ETEATSVIPAARLFKAFILDGDNLFPKVAPQAISSVENIEGNGG-----PGTIKKISFP-----EGFP-FKY--VKDRVD 72 (159)
T ss_dssp EEEEEESSCHHHHHHHHTTTHHHHHHHHCTTTCCEEEEEECSSS-----TTCEEEEECC-----TTSS-CSE--EEEEEE
T ss_pred EEEEEecCCHHHHHHHHhcCccccchhhCchhccEEEEEcCCCC-----CceEEEEEEe-----cCCC-ccE--EEEEEE
Confidence 34677899999999999664223334444 23455556677773 2567988875 1233 223 334455
Q ss_pred -ecCCCCeEEEEEEEeeCCCCCCCeEEEEEEEEEEeeCCCCeEEEEEEEEEEeeeceeeeeeeccHHHHHHHHHHHHHHH
Q 009822 418 -LSPDKKIFVFETVQQAHDVPFGSYFEIHGRWHLETIAENSSTIDIKVGAHFKKWCVIQFKIKTGAVNKYKKEVELMLET 496 (524)
Q Consensus 418 -~~~~~~~~vv~~~~~~~dVPygd~F~v~~r~~i~~~~~~~c~l~v~~~V~f~K~t~~K~~Ie~~~~~~~~~~~~~~~~~ 496 (524)
...++..|..... -.|++-...=.....+.+.+.++++|.+. +..+|.+-. -..+.-...+..++.+..+++.
T Consensus 73 ~iD~~~~~~~y~ii--egd~l~~~~~~y~~ti~v~p~~~ggs~v~--wt~~y~~~~--~~~~~~~~~k~~~~~~~~~~k~ 146 (159)
T 4a8u_A 73 EVDHTNFKYSYSVI--EGGPVGDTLEKISNEIKIVATPNGGSILK--INNKYHTKG--DHEVKAEQIKASKEMGETLLRA 146 (159)
T ss_dssp EEETTTTEEEEEEE--EETTCBTTEEEEEEEEEEEECTTSCEEEE--EEEEEEESS--SCCC-CHHHHHHHHHHHHHHHH
T ss_pred EEccccCEEEEEEe--eCCCCccceEEEEEEEEEEECCCCceEEE--EEEEEEECC--CCcCCHHHHHHHHHHHHHHHHH
Confidence 3334444444222 23333111223344566777766678654 444555421 1122333445567788899999
Q ss_pred HHHHHhhcCC
Q 009822 497 ARSYIKICTS 506 (524)
Q Consensus 497 ~~~~l~~~~~ 506 (524)
++.+|-.+..
T Consensus 147 ie~yll~np~ 156 (159)
T 4a8u_A 147 VESYLLAHSD 156 (159)
T ss_dssp HHHHHHHCTT
T ss_pred HHHHHhhChh
Confidence 9999987754
No 73
>1tw0_A Pathogenesis-related class 10 protein SPE-16; seven antiparallel beta-sheet, plant protein; 2.20A {Pachyrhizus erosus} SCOP: d.129.3.1 PDB: 1txc_A*
Probab=82.61 E-value=23 Score=30.48 Aligned_cols=149 Identities=8% Similarity=0.029 Sum_probs=83.0
Q ss_pred eeeeeEEecCHHHHHHHHcCCCCchHHHHHHHcCCcceEeccccccCCCCCcEEEEEEEeeccCCCCCceeeEeEEEEEE
Q 009822 338 GIYNDVFPCTAEQFFTLLFSDDSKFTNEYRAARKDSNLVMGQWHAADEYDGQVREVAFRSLCKSPIYPRDTAMTESQHAV 417 (524)
Q Consensus 338 ~~~~~~~~~s~~~lf~~lf~d~s~f~~~~~~~~~~~~i~~~~W~~~~~~~~~~R~~~y~~~~~~~~gpk~~~~~~~Q~~~ 417 (524)
...+.+.++|++++|.++-.|-...+.+++......++..+.|. .+..|.++|. + |.....+ ++++.
T Consensus 5 ~~~e~~i~a~a~kvw~~~~~d~~~~~pk~~~~i~s~~i~eG~g~-----~Gsir~~~~~-~-----G~~~~~~--kErl~ 71 (157)
T 1tw0_A 5 FRDETSSSVAPAKLYKALTKDSDTIAQKIDGPIQSIELVEGNGG-----VGTIKKITAN-E-----GDKTSFV--LQKVD 71 (157)
T ss_dssp EEEEEEESSCHHHHHHHHHHTGGGGGGGSCSSEEEEEEEESSSS-----TTCEEEEEEE-E-----TTEEEEE--EEEEE
T ss_pred EEEEEEecCCHHHHHHHHhcCcchhhhhHHhhccEEEEEeCCCC-----CCeEEEEEee-C-----CCccceE--EEEEE
Confidence 34567889999999999863322234444434444455566662 2567999886 2 3222223 33455
Q ss_pred -ecCCCCeEEEEEEEeeCCCCCCCeEEEEEEEEEEeeCCCCeEEEEEEEEEEeeeceeeeeeeccHHHHHHHHHHHHHHH
Q 009822 418 -LSPDKKIFVFETVQQAHDVPFGSYFEIHGRWHLETIAENSSTIDIKVGAHFKKWCVIQFKIKTGAVNKYKKEVELMLET 496 (524)
Q Consensus 418 -~~~~~~~~vv~~~~~~~dVPygd~F~v~~r~~i~~~~~~~c~l~v~~~V~f~K~t~~K~~Ie~~~~~~~~~~~~~~~~~ 496 (524)
...++..|..... . -|+.-...=+....|.+.+.++++|.+.. .++|.+.. -....-...+..++.+..+++.
T Consensus 72 ~~D~~~~~~~y~ii-e-Gd~~~~~~~~~~~~~~v~~~~~~gs~v~w--~~~y~~~~--~~~~~~~~~~~~~~~~~~~~k~ 145 (157)
T 1tw0_A 72 AIDEANLGYDYSIV-G-GTGLPESLEKLSFETKVVAGSGGGSISKV--TLKFHTKG--DAPLSDAVRDDALAKGAGFFKA 145 (157)
T ss_dssp EEETTTTEEEEEEE-E-CTTSCTTEEEEEEEEEEEECSSSSEEEEE--EEEEEEST--TCCCCHHHHHHHHHHHHHHHHH
T ss_pred EEeccCCEEEEEEE-e-cCCCccceEEEEEEEEEEecCCCCEEEEE--EEEEEECC--CCCCCHHHHHHHHHHHHHHHHH
Confidence 4444445444332 2 23321123344567777787666776554 44555421 0111222333457889999999
Q ss_pred HHHHHhhcC
Q 009822 497 ARSYIKICT 505 (524)
Q Consensus 497 ~~~~l~~~~ 505 (524)
++++|..+.
T Consensus 146 ie~yll~~p 154 (157)
T 1tw0_A 146 IEGYVLANP 154 (157)
T ss_dssp HHHHHHHCG
T ss_pred HHHHHHhCc
Confidence 999998764
No 74
>2vjg_A Major allergen DAU C 1; major carrot allergen, pathogenesis-related protein, plant defense; HET: P4C PG4 PGE; 2.70A {Daucus carota} PDB: 2wql_A* 2bk0_A
Probab=81.54 E-value=25 Score=30.22 Aligned_cols=145 Identities=14% Similarity=0.141 Sum_probs=77.8
Q ss_pred eeeeEEecCHHHHHHHHcCCCCchHHHHH-HHcCCcceEeccccccCCCCCcEEEEEEEeeccCCCCCceeeEeEEEEEE
Q 009822 339 IYNDVFPCTAEQFFTLLFSDDSKFTNEYR-AARKDSNLVMGQWHAADEYDGQVREVAFRSLCKSPIYPRDTAMTESQHAV 417 (524)
Q Consensus 339 ~~~~~~~~s~~~lf~~lf~d~s~f~~~~~-~~~~~~~i~~~~W~~~~~~~~~~R~~~y~~~~~~~~gpk~~~~~~~Q~~~ 417 (524)
-.+.+.++|++++|.+++.|-.....+.+ ...+..++ .+.+. .+..|.++|. .-+| ...+ ++++.
T Consensus 7 ~~ei~i~a~a~kvw~~~v~d~~~l~pk~~P~~v~s~e~-eGdg~-----~Gsir~~~~~-----~g~~-~~~~--kErl~ 72 (154)
T 2vjg_A 7 SLEITSSVSAEKIFSGIVLDVDTVIPKAATGAYKSVEV-KGDGG-----AGTVRIITLP-----EGSP-ITTM--TVRTD 72 (154)
T ss_dssp EEEEEESSCHHHHHHHHTTTHHHHHHHHSTTTCSEEEE-ESSSS-----TTCEEEEECC-----TTCS-CCEE--EEEEE
T ss_pred EEEEEecCCHHHHHHhhhCCccccchhhccCceeEEEE-eCCCC-----CceEEEEEec-----CCCC-ceEE--EEEEE
Confidence 44678899999999998775323333443 23444445 45431 3577988874 1233 2233 34444
Q ss_pred -ecCCCCeEEEEEEEeeCCCCCCCeEEEEEEEEEEeeCCCCeEEEEEEEEEEeeeceeeeeeeccHHHHHHHHHHHHHHH
Q 009822 418 -LSPDKKIFVFETVQQAHDVPFGSYFEIHGRWHLETIAENSSTIDIKVGAHFKKWCVIQFKIKTGAVNKYKKEVELMLET 496 (524)
Q Consensus 418 -~~~~~~~~vv~~~~~~~dVPygd~F~v~~r~~i~~~~~~~c~l~v~~~V~f~K~t~~K~~Ie~~~~~~~~~~~~~~~~~ 496 (524)
...++..|..... -.|++-...=+....+.+.+.++++|.+. +..+|.+.. -..+.-...+..++....+++.
T Consensus 73 ~iD~~~~~~~y~ii--egd~l~~~~~~~~~ti~v~p~~~ggs~v~--wt~~y~~~~--~~~~~~~~~~~~~~~~~~~~k~ 146 (154)
T 2vjg_A 73 AVNKEALSYDSTVI--DGDILLGFIESIETHMVVVPTADGGSITK--TTAIFHTKG--DAVVPEENIKFADAQNTALFKA 146 (154)
T ss_dssp EEETTTTEEEEEEE--ESGGGTTTEEEEEEEEEEEECTTSCEEEE--EEEEEEEST--TCCCCHHHHHHHHHHHHHHHHH
T ss_pred EEeccCCEEEEEEE--ecCCCccceEEEEEEEEEEECCCCcEEEE--EEEEEEECC--CCCCCHHHHHHHHHHHHHHHHH
Confidence 3444444444332 23332111223345566677766677644 445555421 1122233344567778888888
Q ss_pred HHHHHhh
Q 009822 497 ARSYIKI 503 (524)
Q Consensus 497 ~~~~l~~ 503 (524)
++.+|-.
T Consensus 147 ie~ylla 153 (154)
T 2vjg_A 147 IEAYLIA 153 (154)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 8888754
No 75
>2e3n_A Lipid-transfer protein CERT; ceramide transfer, lipid transport; HET: 6CM; 1.40A {Homo sapiens} PDB: 2e3m_A* 2e3o_A* 2e3p_A* 2e3q_A* 2e3r_A* 2e3s_A 2z9y_A* 3h3q_A* 3h3r_A* 3h3s_A* 3h3t_A* 2z9z_A*
Probab=80.44 E-value=9 Score=35.85 Aligned_cols=149 Identities=8% Similarity=0.107 Sum_probs=69.7
Q ss_pred eeEEe-cCHHHHHHHHcCCCCchHHHHHHHcCCcceEeccccccCCCCCcEEEEEEE-eeccCCCCCceeeEeEEEEEEe
Q 009822 341 NDVFP-CTAEQFFTLLFSDDSKFTNEYRAARKDSNLVMGQWHAADEYDGQVREVAFR-SLCKSPIYPRDTAMTESQHAVL 418 (524)
Q Consensus 341 ~~~~~-~s~~~lf~~lf~d~s~f~~~~~~~~~~~~i~~~~W~~~~~~~~~~R~~~y~-~~~~~~~gpk~~~~~~~Q~~~~ 418 (524)
..+++ ++++++|++++. .....++-.......+ -...++ .+ .+.|. ...-.|+.|+.--+... ....
T Consensus 78 ~~~~~~~~~~~v~~~l~d--~~~r~~Wd~~~~~~~v----le~i~~---~~-~i~y~~~~~p~p~s~RDfV~~r~-~~~~ 146 (255)
T 2e3n_A 78 THAVKGVTGHEVCNYFWN--VDVRNDWETTIENFHV----VETLAD---NA-IIIYQTHKRVWPASQRDVLYLSV-IRKI 146 (255)
T ss_dssp EEEEETCCHHHHHHHHHC--GGGHHHHCCSEEEEEE----EEEEET---TE-EEEEEEECCCTTSCCEEEEEEEE-EEEE
T ss_pred EEEEcCCCHHHHHHHHhC--cchHhhhhhhcceeEE----EEEcCC---CC-EEEEEEeecCCCcCCceeEEEEE-EEec
Confidence 45565 999999999875 3333332212111111 111111 11 23333 33323555554222221 1112
Q ss_pred ---cCC--CCeEEEEEEEeeCCCCCCCeE-EEE------EEEEEEee--------CCCCeEEEEEEEEEEeeeceeeeee
Q 009822 419 ---SPD--KKIFVFETVQQAHDVPFGSYF-EIH------GRWHLETI--------AENSSTIDIKVGAHFKKWCVIQFKI 478 (524)
Q Consensus 419 ---~~~--~~~~vv~~~~~~~dVPygd~F-~v~------~r~~i~~~--------~~~~c~l~v~~~V~f~K~t~~K~~I 478 (524)
.++ +.++++..+..-+++|-..-| +++ +.|.+.+. ++++|+|.....+....+ +-+.++
T Consensus 147 ~~~~~~g~~~~~i~~~Sv~~~~~P~~~g~VR~~~~~~~~~~~~i~~~~g~~~l~~~~~~t~vt~~~~~Dp~G~-iP~~lv 225 (255)
T 2e3n_A 147 PALTENDPETWIVCNFSVDHDSAPLNNRCVRAKINVAMICQTLVSPPEGNQEISRDNILCKITYVANVNPGGW-APASVL 225 (255)
T ss_dssp CCSSTTSCCEEEEEEEECCCTTSCCCSSSEECEEEEEEEEEEEEC---CCCCCCGGGEEEEEEEEEEEECSSC-CCHHHH
T ss_pred cccccCCCCEEEEEEeccCCCCCCCCCCCEEEEEEeeeeeeeEeccCCCCcccccCCCcEEEEEEEEeCCCCc-cCHHHH
Confidence 122 356667666666778866554 222 12223222 235799888888887653 233344
Q ss_pred eccHHHHHHHHHHHHHHHHHHHH
Q 009822 479 KTGAVNKYKKEVELMLETARSYI 501 (524)
Q Consensus 479 e~~~~~~~~~~~~~~~~~~~~~l 501 (524)
.+.+..++...++.+-+.+++..
T Consensus 226 n~~~~~~~~~~l~~L~k~v~~~~ 248 (255)
T 2e3n_A 226 RAVAKREYPKFLKRFTSYVQEKT 248 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhccccHHHHHHHHHHHHhc
Confidence 44444444444444444444433
No 76
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=80.16 E-value=13 Score=41.87 Aligned_cols=87 Identities=13% Similarity=0.145 Sum_probs=57.5
Q ss_pred ceEEEEEEEEeecCcCCCCCCCCCcEEEEEE--CCe----EEeeeeecCCCCCccccEEEEEec--C--CCcEEEEEEEE
Q 009822 13 AYLIKLELLAAKNLIGANLNGTSDPYAIITC--GSE----KRFSSMVPGSRYPMWGEEFNFSVD--E--LPVQIIVTIYD 82 (524)
Q Consensus 13 ~~~L~V~vi~A~~L~~~d~~g~~dpyv~v~~--~~~----~~~T~~~~~t~nP~W~e~f~f~v~--~--~~~~L~v~v~d 82 (524)
...+.|+|..+.++... ...+-||.+.+ |+. ...|..+.-..+|.|||.+.|++. + ....|.|+||+
T Consensus 216 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~ 292 (940)
T 2wxf_A 216 EQPFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALYA 292 (940)
T ss_dssp CSEEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEEE
T ss_pred CCceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEEE
Confidence 35689999999998653 35677877765 433 234555555678999999999863 3 35669999999
Q ss_pred cCCC--C----------CCceeEEEEEEcccC
Q 009822 83 WDII--W----------KSTVLGSVIVTVESE 102 (524)
Q Consensus 83 ~d~~--~----------~d~~iG~~~i~l~~~ 102 (524)
.... + .+..||.+.++|-+-
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~ 324 (940)
T 2wxf_A 293 VVEKAKKARSTKKKSKKADCPIAWANLMLFDY 324 (940)
T ss_dssp EC----------------CEEEEEEEEESBCT
T ss_pred ecCCccCccccccccccccceEEEEeeeEECC
Confidence 6432 1 134788888887765
No 77
>2vq5_A S-norcoclaurine synthase; lyase, S- norcoclaurine biosynthesis, dopamine, hydroxybenzaldehyde; HET: MSE LDP HBA; 2.09A {Thalictrum flavum} PDB: 2vne_A*
Probab=76.44 E-value=32 Score=31.05 Aligned_cols=147 Identities=11% Similarity=0.100 Sum_probs=79.8
Q ss_pred eeeeeEEecCHHHHHHHHcC-CCCchHHHHH-HHcCCcceEeccccccCCCCCcEEEEEEEeeccCCCCCceeeEeEEEE
Q 009822 338 GIYNDVFPCTAEQFFTLLFS-DDSKFTNEYR-AARKDSNLVMGQWHAADEYDGQVREVAFRSLCKSPIYPRDTAMTESQH 415 (524)
Q Consensus 338 ~~~~~~~~~s~~~lf~~lf~-d~s~f~~~~~-~~~~~~~i~~~~W~~~~~~~~~~R~~~y~~~~~~~~gpk~~~~~~~Q~ 415 (524)
...+.++++|++++|.++.+ |-..++.+.+ ...+..++. ++|. .+..|.++|. . |+....+. ++
T Consensus 31 ~~~eveI~apa~kvW~~~v~~df~~l~pk~~P~~i~s~e~~-GdGg-----~GsIR~lt~~---~---G~~~~~vk--Er 96 (201)
T 2vq5_A 31 IHHELEVAASADDIWTVYSWPGLAKHLPDLLPGAFEKLEII-GDGG-----VGTILDMTFV---P---GEFPHEYK--EK 96 (201)
T ss_dssp EEEEEEESSCHHHHHHHHTCGGGGGGHHHHSTTSCSEEEEE-SSSS-----TTCEEEEECC---T---TCSSCEEE--EE
T ss_pred EEEEEEecCCHHHHHhhhhcCCcccchhhhCcccceEEEEe-cCCC-----CCeEEEEEec---C---CCcccEEE--EE
Confidence 34577889999999999876 5445555555 334555666 8773 2567988875 1 22212333 34
Q ss_pred EE-ecCCCCeEEEEEEEee-CCCCCCCeEEEEEEEEEEeeCCCCeEEEEEEEEEEeeeceeeeeeeccHHHHHHHHHHHH
Q 009822 416 AV-LSPDKKIFVFETVQQA-HDVPFGSYFEIHGRWHLETIAENSSTIDIKVGAHFKKWCVIQFKIKTGAVNKYKKEVELM 493 (524)
Q Consensus 416 ~~-~~~~~~~~vv~~~~~~-~dVPygd~F~v~~r~~i~~~~~~~c~l~v~~~V~f~K~t~~K~~Ie~~~~~~~~~~~~~~ 493 (524)
+. ..+++..|.....--- ...||. +|.. ...+.+.++++|. |.+.++|.+..-. .+-..-...++.+..+
T Consensus 97 le~iDde~~~~sYsiieGd~l~~~~~-~y~~--tikv~p~~dggs~--vkWt~~ye~~~~~---~~~~e~~~~~~~~~~~ 168 (201)
T 2vq5_A 97 FILVDNEHRLKKVQMIEGGYLDLGVT-YYMD--TIHVVPTGKDSCV--IKSSTEYHVKPEF---VKIVEPLITTGPLAAM 168 (201)
T ss_dssp EEEEETTTTEEEEEEEEEGGGGTTEE-EEEE--EEEEEEEETTEEE--EEEEEEEEECGGG---HHHHTTTCCSHHHHHH
T ss_pred EEEEchhhCEEEEEEEecCcccccee-EEEE--EEEEEECCCCCeE--EEEEEEEEECCCC---CCCChhHHHHHHHHHH
Confidence 44 3444445444333211 112332 3433 3444555556776 4555566542100 0000001335678888
Q ss_pred HHHHHHHHhhcCC
Q 009822 494 LETARSYIKICTS 506 (524)
Q Consensus 494 ~~~~~~~l~~~~~ 506 (524)
++.++++|..+..
T Consensus 169 ~KaiE~yLlanp~ 181 (201)
T 2vq5_A 169 ADAISKLVLEHKS 181 (201)
T ss_dssp HHHHHHHHHSCCC
T ss_pred HHHHHHHHHhCcc
Confidence 9999999988764
No 78
>3rws_A MTN13 protein; zeatin, cytokinin, hormone, lucerne, nodulin, NODU plant protein; HET: ZEA; 1.85A {Medicago truncatula}
Probab=72.59 E-value=48 Score=28.86 Aligned_cols=148 Identities=9% Similarity=0.097 Sum_probs=80.4
Q ss_pred eeeeeEEecCHHHHHHHHcCCCCchHHHHH-HHcCCcceEeccccccCCCCCcEEEEEEEeeccCCCCCceeeEeEEEEE
Q 009822 338 GIYNDVFPCTAEQFFTLLFSDDSKFTNEYR-AARKDSNLVMGQWHAADEYDGQVREVAFRSLCKSPIYPRDTAMTESQHA 416 (524)
Q Consensus 338 ~~~~~~~~~s~~~lf~~lf~d~s~f~~~~~-~~~~~~~i~~~~W~~~~~~~~~~R~~~y~~~~~~~~gpk~~~~~~~Q~~ 416 (524)
.-.+.+.++|++++|.++..|-...+.+.+ ...+..++..+.+. .+..|.++|. ||. ..+ ++++
T Consensus 11 ~~~ei~i~apa~kvw~~~v~d~~~l~pk~~P~~v~s~e~~eGdgg-----~Gsir~~t~~-------g~~-~~~--kErl 75 (168)
T 3rws_A 11 SESEYVSSLSAEKLYRGIVEDGNIIYPKALPRFIEKAETLEGDGG-----PGTIKKLTFV-------GDF-GST--KQHI 75 (168)
T ss_dssp EEEEEEESSCHHHHHHHHHTSHHHHHHHHSTTTEEEEEEEESSSS-----TTCEEEEEES-------SSS-CEE--EEEE
T ss_pred EEEEEEecCCHHHHHHHHhcCccccchhhCccccceEEEeeCCCC-----CCeEEEEEEc-------CCC-eEE--EEEE
Confidence 345778899999999998554222233333 22333444445531 3577988886 221 122 2445
Q ss_pred E-ecCCCCeEEEEEEEeeCCCCCCC--eEEEEEEEEEEeeCCCCeEEEEEEEEEEeeeceee-eeeeccHHHHHHHHHHH
Q 009822 417 V-LSPDKKIFVFETVQQAHDVPFGS--YFEIHGRWHLETIAENSSTIDIKVGAHFKKWCVIQ-FKIKTGAVNKYKKEVEL 492 (524)
Q Consensus 417 ~-~~~~~~~~vv~~~~~~~dVPygd--~F~v~~r~~i~~~~~~~c~l~v~~~V~f~K~t~~K-~~Ie~~~~~~~~~~~~~ 492 (524)
. ...++..|..... -.|+ .++ .=.....+.+.+.++++|.+. +.++|.+.. - ..+.-...+..++....
T Consensus 76 ~~iD~~~~~~sY~ii--egd~-l~~~p~~~y~~ti~v~p~~~ggs~v~--wt~~y~~~~--~d~~~~~e~~k~~~~~~~~ 148 (168)
T 3rws_A 76 DMVDRENCAYTYSVY--EGIA-LSDQPLEKIVFEFKLVPTPEEGCIVK--STTKYYTKG--DDIELSKDYLEAGIERFEG 148 (168)
T ss_dssp EEEETTTTEEEEEEC--SSCC-BTTBCEEEEEEEEEEEECTTSCEEEE--EEEEEEECS--SSCCCCHHHHHHHHHHHHH
T ss_pred EEEcccCCEEEEEEE--ccCc-ccCcCceEEEEEEEEEECCCCceEEE--EEEEEEECC--CccCCCHHHHHHHHHHHHH
Confidence 5 3334444444332 2333 122 222344566677766678644 444454421 1 11222234557778889
Q ss_pred HHHHHHHHHhhcCCC
Q 009822 493 MLETARSYIKICTSG 507 (524)
Q Consensus 493 ~~~~~~~~l~~~~~~ 507 (524)
+++.++.+|-.+...
T Consensus 149 ~~k~ie~yllanp~~ 163 (168)
T 3rws_A 149 FTKAVESFLLANPDY 163 (168)
T ss_dssp HHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHhChHh
Confidence 999999999887643
No 79
>1e09_A PRU AV 1; allergen, major cherry allergen, pathogenesis-related protein, heteronuclear structure; NMR {Prunus avium} SCOP: d.129.3.1 PDB: 1h2o_A 2lpx_A
Probab=72.34 E-value=46 Score=28.51 Aligned_cols=149 Identities=13% Similarity=0.178 Sum_probs=82.3
Q ss_pred eeeeeEEecCHHHHHHHHcCCCCchHHHHHH-HcCCcceEeccccccCCCCCcEEEEEEEeeccCCCCCceeeEeEEEEE
Q 009822 338 GIYNDVFPCTAEQFFTLLFSDDSKFTNEYRA-ARKDSNLVMGQWHAADEYDGQVREVAFRSLCKSPIYPRDTAMTESQHA 416 (524)
Q Consensus 338 ~~~~~~~~~s~~~lf~~lf~d~s~f~~~~~~-~~~~~~i~~~~W~~~~~~~~~~R~~~y~~~~~~~~gpk~~~~~~~Q~~ 416 (524)
...+.+.++|++++|.++-.|-...+.+++- .....++..+.|. .+..|.++|. + |.....+ ++++
T Consensus 5 ~~~e~~i~ap~~~vw~~~~~d~~~~~pk~~P~~i~s~~~~eGdgg-----~Gsvr~~~~~-~-----G~~~~~~--kErl 71 (159)
T 1e09_A 5 YESEFTSEIPPPRLFKAFVLDADNLVPKIAPQAIKHSEILEGDGG-----PGTIKKITFG-E-----GSQYGYV--KHKI 71 (159)
T ss_dssp EEEEEEESSCHHHHHHHHTTTHHHHHHHHCTTTEEEEEEEESSSS-----TTCEEEEEEC-C-----SSSCEEE--EEEE
T ss_pred EEEEEEecCCHHHHHHHHhcCccccchhhChhhccEEEEEeCCCC-----CceEEEEEec-C-----CCCceEE--EEEE
Confidence 3457789999999999985322223444442 3444455567662 2567988885 2 2221233 3345
Q ss_pred E-ecCCCCeEEEEEEEeeCCCCCCCeE-EEEEEEEEEeeCCCCeEEEEEEEEEEeeeceeeeeeeccHHHHHHHHHHHHH
Q 009822 417 V-LSPDKKIFVFETVQQAHDVPFGSYF-EIHGRWHLETIAENSSTIDIKVGAHFKKWCVIQFKIKTGAVNKYKKEVELML 494 (524)
Q Consensus 417 ~-~~~~~~~~vv~~~~~~~dVPygd~F-~v~~r~~i~~~~~~~c~l~v~~~V~f~K~t~~K~~Ie~~~~~~~~~~~~~~~ 494 (524)
. ...++..|..... .+=+..+.| .....|.+.+.++++|.+.. .++|.+.. -..+.-...+..++.+..++
T Consensus 72 ~~~D~~~~~~~y~ii---eG~~~~~~~~~~~~~~~v~~~~~~gs~v~w--t~~y~~~~--~~~~~~~~~~~~~~~~~~~~ 144 (159)
T 1e09_A 72 DSIDKENYSYSYTLI---EGDALGDTLEKISYETKLVASPSGGSIIKS--TSHYHTKG--NVEIKEEHVKAGKEKASNLF 144 (159)
T ss_dssp EEEETTTTEEEEEEC---CCTTTGGGEEEEEEEEEECCCTTSSEEEEE--EEEEEECS--SCCCCHHHHHHHHHHHHHHH
T ss_pred EEEcCCCCEEEEEEE---ecccCcccceEEEEEEEEEecCCCCEEEEE--EEEEEECC--CCCCCHHHHHHHHHHHHHHH
Confidence 5 4444445444332 222222212 33556667776656776544 45555421 11122223345578899999
Q ss_pred HHHHHHHhhcCC
Q 009822 495 ETARSYIKICTS 506 (524)
Q Consensus 495 ~~~~~~l~~~~~ 506 (524)
+.++++|..+..
T Consensus 145 k~ie~yll~~~~ 156 (159)
T 1e09_A 145 KLIETYLKGHPD 156 (159)
T ss_dssp HHHHHHHHHCTT
T ss_pred HHHHHHHHhChh
Confidence 999999987753
No 80
>2flh_A Cytokinin-specific binding protein; zeatin, pathogenesis-related proteins, multiple- ligand binding, plant protein; HET: ZEA; 1.20A {Vigna radiata} PDB: 3c0v_A*
Probab=72.16 E-value=46 Score=28.43 Aligned_cols=143 Identities=15% Similarity=0.204 Sum_probs=76.2
Q ss_pred eeeeEEecCHHHHHHHHcCCCCchHHHHH-HHcCCcceEeccccccCCCCCcEEEEEEEeeccCCCCCceeeEeEEEEEE
Q 009822 339 IYNDVFPCTAEQFFTLLFSDDSKFTNEYR-AARKDSNLVMGQWHAADEYDGQVREVAFRSLCKSPIYPRDTAMTESQHAV 417 (524)
Q Consensus 339 ~~~~~~~~s~~~lf~~lf~d~s~f~~~~~-~~~~~~~i~~~~W~~~~~~~~~~R~~~y~~~~~~~~gpk~~~~~~~Q~~~ 417 (524)
..+.+.++|++++|.++.+|-..++.+.+ ......++..+.|. .+..|.++|. . -.+| ..+.| ++.
T Consensus 6 ~~e~~i~a~a~kvw~~~v~d~~~l~pk~~P~~i~s~~~~eGdgg-----~Gsvr~~~~~---~-g~~~--~~~kE--rl~ 72 (155)
T 2flh_A 6 NTQTELSVRLEALWAVLSKDFITVVPKVLPHIVKDVQLIEGDGG-----VGTILIFNFL---P-EVSP--SYQRE--EIT 72 (155)
T ss_dssp EEEEEESSCHHHHHHHHHTSCTTHHHHHCTTTEEEEEEEECSSS-----TTCEEEEEEC---T-TSSS--CEEEE--EEE
T ss_pred EEEEEecCCHHHHHHHHhcccccccchhccccceEEEEEcCCCC-----CCeEEEEEee---C-CCCC--cEEEE--EEE
Confidence 45678899999999998775455545554 23333345556652 3577988885 1 0123 23333 344
Q ss_pred -ecCCCCeEEEEEEEee-CCCCCCCeEEEEEEEEEEeeCCCCeEEEEEEEEEEeeeceeeeeeeccHHHHHH--HHHHHH
Q 009822 418 -LSPDKKIFVFETVQQA-HDVPFGSYFEIHGRWHLETIAENSSTIDIKVGAHFKKWCVIQFKIKTGAVNKYK--KEVELM 493 (524)
Q Consensus 418 -~~~~~~~~vv~~~~~~-~dVPygd~F~v~~r~~i~~~~~~~c~l~v~~~V~f~K~t~~K~~Ie~~~~~~~~--~~~~~~ 493 (524)
..+++..|.....--. ...||. +|. ..+.+.+.++++|. |.+.++|.+..-.. + -.+..+ +.+..+
T Consensus 73 ~iD~~~~~~~y~iieg~~l~~~~~-~~~--~~i~v~p~~~ggs~--v~wt~~y~~~~~~~--~---~~~~~~~~~~~~~~ 142 (155)
T 2flh_A 73 EFDESSHEIGLQVIEGGYLSQGLS-YYK--TTFKLSEIEEDKTL--VNVKISYDHDSDIE--E---KVTPTKTSQSTLMY 142 (155)
T ss_dssp EEETTTTEEEEEEEEEGGGGTTCS-EEE--EEEEEEEEETTEEE--EEEEEEEEC------------CCHHHHHHHHHHH
T ss_pred EEeCCCCEEEEEEEeccccccCce-EEE--EEEEEEECCCCCEE--EEEEEEEEECCCCc--c---ChhHhhhHHHHHHH
Confidence 4444445444333211 122544 343 44555666666775 44556666522110 1 123445 678888
Q ss_pred HHHHHHHHhhc
Q 009822 494 LETARSYIKIC 504 (524)
Q Consensus 494 ~~~~~~~l~~~ 504 (524)
++.++.+|..+
T Consensus 143 ~k~ie~yll~~ 153 (155)
T 2flh_A 143 LRRLERYLSNG 153 (155)
T ss_dssp HHHHHHHHC--
T ss_pred HHHHHHHHhhC
Confidence 88888888654
No 81
>3p9v_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.78A {Marinobacter aquaeolei}
Probab=70.41 E-value=50 Score=28.14 Aligned_cols=138 Identities=11% Similarity=0.152 Sum_probs=70.7
Q ss_pred eeEEecCHHHHHHHHcCCCCchHHHHHHHcCCcceEeccccccCCCCCcEEEEEEEe-eccCCCCCceeeEeEEEEEEec
Q 009822 341 NDVFPCTAEQFFTLLFSDDSKFTNEYRAARKDSNLVMGQWHAADEYDGQVREVAFRS-LCKSPIYPRDTAMTESQHAVLS 419 (524)
Q Consensus 341 ~~~~~~s~~~lf~~lf~d~s~f~~~~~~~~~~~~i~~~~W~~~~~~~~~~R~~~y~~-~~~~~~gpk~~~~~~~Q~~~~~ 419 (524)
..+.+.|++++|+++=+ +-. +... -=.+.+|...++ + .. .... .+ .+|+....-.-+-++...
T Consensus 12 s~~I~ap~e~v~~lv~D----ve~-w~~~----yp~~~p~~~~~~-~-~~---~~~~a~l--~vg~~~~~~~~~s~~~~~ 75 (161)
T 3p9v_A 12 DLEIPASYDEVFDLLAD----VPK-SASH----FPKVDKLVDLGN-N-AY---RWEMEKV--GVDKHAIQSVYACTYHAD 75 (161)
T ss_dssp EEEESSCHHHHHHHHTC----HHH-HHTT----STTEEEEEEEET-T-EE---EEEECCB--SSGGGCBCCEEEEEEEEE
T ss_pred EEEEcCCHHHHHHHHhC----hhh-hHhh----CCCeEEEEEcCC-C-ce---EEEEEEE--eeeeEEEEEEEEEEEEEc
Confidence 45689999999999842 211 1100 012446655433 2 22 2222 22 355443211222233344
Q ss_pred CCCCeEEEEEEEeeCCCCCCCe-EEEEEEEEEEeeCCCCeEEEEEEEEEEeeeceeeeeeeccHHHHHHHHHHHHHHHHH
Q 009822 420 PDKKIFVFETVQQAHDVPFGSY-FEIHGRWHLETIAENSSTIDIKVGAHFKKWCVIQFKIKTGAVNKYKKEVELMLETAR 498 (524)
Q Consensus 420 ~~~~~~vv~~~~~~~dVPygd~-F~v~~r~~i~~~~~~~c~l~v~~~V~f~K~t~~K~~Ie~~~~~~~~~~~~~~~~~~~ 498 (524)
+++..+.+... + |+- =....+|.|++.++++|+|......+|.. .+.++++.-.-.-..+.++.+++...
T Consensus 76 ~~~~~I~~~~~----~---g~~~~~l~g~w~f~p~~~g~t~V~~~~~~e~~~--pl~~ll~~~~~~~~~~~~~~~v~af~ 146 (161)
T 3p9v_A 76 KEAGKITWSPI----K---GEGNGVVSGSWTLSAKGDNATAVKFQTSAELTV--PLPSLLKLAISPVIKHEFNSLVDTYM 146 (161)
T ss_dssp TTTTEEEEEEC----T---TSTTEEEEEEEEEEESSSSCEEEEEEEEEEEEE--CSCGGGHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEe----c---CccceeEEEEEEEEECCCCeEEEEEEEEEEEcC--cchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 43445444332 2 333 25678999999998889999998888863 12233333222233444555555555
Q ss_pred HHHhh
Q 009822 499 SYIKI 503 (524)
Q Consensus 499 ~~l~~ 503 (524)
+.+++
T Consensus 147 ~ra~~ 151 (161)
T 3p9v_A 147 ANLKK 151 (161)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 44443
No 82
>2i9y_A Major latex protein-like protein 28 or MLP-like protein 28; AT1G70830, BET V1-like, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana}
Probab=68.97 E-value=57 Score=28.20 Aligned_cols=145 Identities=10% Similarity=0.112 Sum_probs=78.9
Q ss_pred ceeeeeEEecCHHHHHHHHcCCCCchHHHHH-HHcCCcceEeccccccCCCCCcEEEEEEEeeccCCCCCceeeEeEEEE
Q 009822 337 VGIYNDVFPCTAEQFFTLLFSDDSKFTNEYR-AARKDSNLVMGQWHAADEYDGQVREVAFRSLCKSPIYPRDTAMTESQH 415 (524)
Q Consensus 337 ~~~~~~~~~~s~~~lf~~lf~d~s~f~~~~~-~~~~~~~i~~~~W~~~~~~~~~~R~~~y~~~~~~~~gpk~~~~~~~Q~ 415 (524)
+...+.++++|++++|.++-++... +.+++ ......++..+.|.. .+..|.++|.. |++...+. ++
T Consensus 18 k~~~ev~i~apa~kvw~~~~~d~~~-lpk~~P~~i~s~~~~eGd~gg----~Gsir~~~~~~------gg~~~~~k--Er 84 (166)
T 2i9y_A 18 KLETDVEIKASADKFHHMFAGKPHH-VSKASPGNIQGCDLHEGDWGT----VGSIVFWNYVH------DGEAKVAK--ER 84 (166)
T ss_dssp EEEEEEEESSCHHHHHGGGSSCSSC-CCCSCSSCCSSCCCCSCCSCS----TTCCCEEEEEE------TTEEEEEE--EE
T ss_pred EEEEEEEecCCHHHHHHHHhccccc-ccccccccceEEEEEcCCCCC----CCeEEEEEEec------CCCceEEE--EE
Confidence 3456778899999999998775322 22333 234444555566621 35679888862 33222333 34
Q ss_pred EE-ecCCCCeEEEEEEEeeCCCCCCCeEEEEEEEEEEeeCC-CCeEEEEEEEEEEeeeceeeeeeeccHHHHHHHHHHHH
Q 009822 416 AV-LSPDKKIFVFETVQQAHDVPFGSYFEIHGRWHLETIAE-NSSTIDIKVGAHFKKWCVIQFKIKTGAVNKYKKEVELM 493 (524)
Q Consensus 416 ~~-~~~~~~~~vv~~~~~~~dVPygd~F~v~~r~~i~~~~~-~~c~l~v~~~V~f~K~t~~K~~Ie~~~~~~~~~~~~~~ 493 (524)
+. +..++..|..... --+++ ..+=+....|.+.+.++ ++|.+ .+.++|.+.. ..+.. -+...+.+..+
T Consensus 85 l~~iD~~~~~~~y~ii--eGd~~-~~~~~~~~ti~v~p~~~g~gs~v--~wt~~ye~~~---~~~~~--p~~~~~~~~~~ 154 (166)
T 2i9y_A 85 IEAVEPDKNLITFRVI--EGDLM-KEYKSFLLTIQVTPKPGGPGSIV--HWHLEYEKIS---EEVAH--PETLLQFCVEV 154 (166)
T ss_dssp EEEEETTTTEEEEEEC--CTTGG-GTEEEEEEEEEEEEEEETTEEEE--EEEEEEEESS---TTTCC--THHHHHHHHHH
T ss_pred EEEEeccCcEEEEEEE--eCCCC-CCeeEEEEEEEEEECCCCCCcEE--EEEEEEEECC---CCCCC--HHHHHHHHHHH
Confidence 44 4444444444332 12331 12224466677777642 36754 4445555421 00111 13556788888
Q ss_pred HHHHHHHHhhc
Q 009822 494 LETARSYIKIC 504 (524)
Q Consensus 494 ~~~~~~~l~~~ 504 (524)
++.+.++|.++
T Consensus 155 ~k~ie~~l~~~ 165 (166)
T 2i9y_A 155 SKEIDEHLLAE 165 (166)
T ss_dssp HHHHHHHHHSC
T ss_pred HHHHHHHHhhC
Confidence 88888888764
No 83
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=64.99 E-value=39 Score=38.53 Aligned_cols=87 Identities=15% Similarity=0.206 Sum_probs=56.9
Q ss_pred eEEEEEEEEeecCcCCCCCCCCCcEEEEEE--CCe----EEeeeeecCCCCCccccEEEEEec--C--CCcEEEEEEEEc
Q 009822 14 YLIKLELLAAKNLIGANLNGTSDPYAIITC--GSE----KRFSSMVPGSRYPMWGEEFNFSVD--E--LPVQIIVTIYDW 83 (524)
Q Consensus 14 ~~L~V~vi~A~~L~~~d~~g~~dpyv~v~~--~~~----~~~T~~~~~t~nP~W~e~f~f~v~--~--~~~~L~v~v~d~ 83 (524)
..+.|+|+.+.++... .....+.||.+.+ |++ ...|..+. ..+|.|||...|++. + ....|.|+||+.
T Consensus 355 ~~f~v~i~~~~~~n~~-~~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~~ 432 (1091)
T 3hhm_A 355 SALRIKILCATYVNVN-IRDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARLCLSICSV 432 (1091)
T ss_dssp SEEEEEEEEESCCCCC-CSSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEEEEEECCC
T ss_pred CCEEEEEEEecCCCCC-ccccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEEEEEEEEe
Confidence 4678999999887532 2334677888776 322 22333333 457889999999863 3 356699999986
Q ss_pred CCCC----CCceeEEEEEEcccC
Q 009822 84 DIIW----KSTVLGSVIVTVESE 102 (524)
Q Consensus 84 d~~~----~d~~iG~~~i~l~~~ 102 (524)
.... ....||-+.++|-+-
T Consensus 433 ~~~~~~~~~~~~lg~~n~~lfd~ 455 (1091)
T 3hhm_A 433 KGRKGAKEEHCPLAWGNINLFDY 455 (1091)
T ss_dssp CCCC-------CCEEEEEESBCT
T ss_pred cCccCcccccceeEEeeeeeEcc
Confidence 5421 234788888888765
No 84
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=63.91 E-value=39 Score=29.10 Aligned_cols=105 Identities=10% Similarity=0.047 Sum_probs=65.9
Q ss_pred CCceEEEEEEEEeecCcCC-CCCCCCCcEEEEEEC---CeEEeeeeecCCCCCccccEEEEEecCC--------CcEEEE
Q 009822 11 NSAYLIKLELLAAKNLIGA-NLNGTSDPYAIITCG---SEKRFSSMVPGSRYPMWGEEFNFSVDEL--------PVQIIV 78 (524)
Q Consensus 11 ~~~~~L~V~vi~A~~L~~~-d~~g~~dpyv~v~~~---~~~~~T~~~~~t~nP~W~e~f~f~v~~~--------~~~L~v 78 (524)
+..+.+.|+|.++.--+.. ...+..+|..-+.++ -+.+.|.++. +.+|.+|-+-.+.+..- ...+.+
T Consensus 15 ~gEnlfEihi~~~~~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~l 93 (156)
T 2yrb_A 15 RGENLFEIHINKVTFSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTITL 93 (156)
T ss_dssp SSCEEEEEEEEEECCCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCEEE
T ss_pred CCCcEEEEEEeEEEEcHHHHhhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCEEE
Confidence 5668899999988622111 112345675555543 4445555555 88999999888887421 235889
Q ss_pred EEEEcCCCCCCceeEEEEEEcccC--C-CcccEEEEecCCCC
Q 009822 79 TIYDWDIIWKSTVLGSVIVTVESE--G-QTGAVWYTLDSPSG 117 (524)
Q Consensus 79 ~v~d~d~~~~d~~iG~~~i~l~~~--~-~~~~~w~~L~~~~G 117 (524)
++..... +.-..||.++|++.++ . .....-.+|.+..|
T Consensus 94 ELhqa~g-~~~~tla~~~I~l~~lLe~~~~i~g~~~L~g~~g 134 (156)
T 2yrb_A 94 EVHQAYS-TEYETIAACQLKFHEILEKSGRIFCTASLIGTKG 134 (156)
T ss_dssp EEEEECS-SCEEEEEEEEECCSHHHHCCSCEEEEEEECBSSS
T ss_pred EEEEeeC-CCceEEEEEEEEhHHhhCcCCceEEEEEEEcCCC
Confidence 9988643 2346899999999987 2 22233446655444
No 85
>3ggn_A Uncharacterized protein DR_A0006; structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 2.00A {Deinococcus radiodurans R1} PDB: 2kcz_A
Probab=59.61 E-value=78 Score=26.56 Aligned_cols=104 Identities=10% Similarity=0.056 Sum_probs=52.8
Q ss_pred eeEEecCHHHHHHHHcCCCCchHHHHHHHcCCcceEeccccccCCCCCcEEEEEEEeeccCCCCCceeeEeEEEEEEecC
Q 009822 341 NDVFPCTAEQFFTLLFSDDSKFTNEYRAARKDSNLVMGQWHAADEYDGQVREVAFRSLCKSPIYPRDTAMTESQHAVLSP 420 (524)
Q Consensus 341 ~~~~~~s~~~lf~~lf~d~s~f~~~~~~~~~~~~i~~~~W~~~~~~~~~~R~~~y~~~~~~~~gpk~~~~~~~Q~~~~~~ 420 (524)
..+++.|++++|+++=. ..-+.+++-.+. .+.. .+ ++ ...+.... +.|+..... .. ++....
T Consensus 9 s~~I~ap~e~V~~~~~D--~e~~p~w~p~~~--~v~~-----~~--~~---~~~~~~~~--~~G~~~~~~-~~-~v~e~~ 70 (155)
T 3ggn_A 9 AVTIGKPAEQLYAVWRD--LPGLPLLMTHLR--SVEV-----LD--DK---RSRWTVEA--PAPLGTVSW-EA-ELTADE 70 (155)
T ss_dssp EEEESSCHHHHHHHHHC--GGGHHHHSTTCC--EEEE-----CS--SS---EEEEEEEC--CTTTCEEEE-EE-EEEEEE
T ss_pred EEEEcCCHHHHHHHHhC--HHHhHHHhhhce--EEEE-----ec--CC---eeEEEEEe--cCCcceEEE-EE-EEEEec
Confidence 56789999999988843 344555543221 1111 11 11 12333322 234222111 12 222222
Q ss_pred CCCeEEEEEEEeeCCCCCCCeEEEEEEEEEEee-CCCCeEEEEEEEEEEe
Q 009822 421 DKKIFVFETVQQAHDVPFGSYFEIHGRWHLETI-AENSSTIDIKVGAHFK 469 (524)
Q Consensus 421 ~~~~~vv~~~~~~~dVPygd~F~v~~r~~i~~~-~~~~c~l~v~~~V~f~ 469 (524)
.+..+.+... +=| ......+|.|... ++++|+|.+....++.
T Consensus 71 p~~~i~~~~~----~g~---~~~~~g~~~F~~~~~~~gT~V~~~~~~~~~ 113 (155)
T 3ggn_A 71 PGKRIAWRSL----PGA---RIENSGEVLFRPAPGARGTEVVVRLTYRPP 113 (155)
T ss_dssp TTTEEEEEEC----TTC---SSCEEEEEEEEECSSSSCEEEEEEEEEC--
T ss_pred CCCEEEEEEC----CCC---CcceEEEEEEEECCCCCceEEEEEEEEECC
Confidence 3455555432 112 2346788999998 4678998888777764
No 86
>3fo5_A Thioesterase, adipose associated, isoform BFIT2; orthogonal bundle, consortium, lipid transport; HET: 1PE TCE; 2.00A {Homo sapiens}
Probab=56.70 E-value=35 Score=32.04 Aligned_cols=116 Identities=11% Similarity=-0.008 Sum_probs=62.9
Q ss_pred eeeeEEecCHHHHHHHHcCCCCchHHHHHHHcCCcceEeccccccCCCCCcEEEEEE--Eeecc-CCCCCceeeEeEEEE
Q 009822 339 IYNDVFPCTAEQFFTLLFSDDSKFTNEYRAARKDSNLVMGQWHAADEYDGQVREVAF--RSLCK-SPIYPRDTAMTESQH 415 (524)
Q Consensus 339 ~~~~~~~~s~~~lf~~lf~d~s~f~~~~~~~~~~~~i~~~~W~~~~~~~~~~R~~~y--~~~~~-~~~gpk~~~~~~~Q~ 415 (524)
-+..++++|++++|+++.. ... +..+|-.+..+...+..+.. ++-| ..|.- .++.|+. ....+
T Consensus 91 k~~~~v~~~~~~v~~~L~D--~~~-------R~~WD~~~~~~~vle~id~~--~ivY~~~~p~~~~~v~~RD---FV~lr 156 (258)
T 3fo5_A 91 HMEMVVHVDAAQAFLLLSD--LRQ-------RPEWDKHYRSVELVQQVDED--DAIYHVTSPALGGHTKPQD---FVILA 156 (258)
T ss_dssp EEEEEESSCHHHHHHHHHC--GGG-------GGGTCTTCCEEEEEEEEETT--EEEEEEEECCCTTCSSCEE---EEEEE
T ss_pred EEEEEEeCCHHHHHHHHhC--chh-------HhHhhhhccEEEEEEEcCCC--eEEEEEecCCccCCCCCCE---EEEEE
Confidence 4577889999999999973 222 22222222222111110011 2333 23321 1233332 22223
Q ss_pred EEe--cCCCC-eEEEEEEEeeCCCCCCCe----EEEEEEEEEEeeCCCCeEEEEEEEEEE
Q 009822 416 AVL--SPDKK-IFVFETVQQAHDVPFGSY----FEIHGRWHLETIAENSSTIDIKVGAHF 468 (524)
Q Consensus 416 ~~~--~~~~~-~~vv~~~~~~~dVPygd~----F~v~~r~~i~~~~~~~c~l~v~~~V~f 468 (524)
... ..+|. +++...++.-+.+|-..- ....+.|+|.+.+++.|+|....++.-
T Consensus 157 ~~r~~~~~G~~yvi~~~SV~hp~~Pp~~g~VR~~~~~sg~~I~P~~~~~t~VtY~~q~dp 216 (258)
T 3fo5_A 157 SRRKPCDNGDPYVIALRSVTLPTHRETPEYRRGETLCSGFCLWREGDQLTKVSYYNQATP 216 (258)
T ss_dssp EEECCSSTTCCEEEEEEEEECTTSCCCTTSEECCCSSEEEEEEEEETTEEEEEEEESCCG
T ss_pred EEEeccCCCCEEEEEEEeccCCCCCCCCCCEEEEEcCcEEEEEECCCCCEEEEEEEeeCC
Confidence 222 23454 555555666678886554 445689999999999999988777753
No 87
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=56.50 E-value=76 Score=35.77 Aligned_cols=88 Identities=13% Similarity=0.094 Sum_probs=51.9
Q ss_pred eEEEEEEEEeecCcCCCCCCCCCcEEEEEE--CCeEE---eeeeecCCCCCccccEEEEEec--C--CCcEEEEEEEEcC
Q 009822 14 YLIKLELLAAKNLIGANLNGTSDPYAIITC--GSEKR---FSSMVPGSRYPMWGEEFNFSVD--E--LPVQIIVTIYDWD 84 (524)
Q Consensus 14 ~~L~V~vi~A~~L~~~d~~g~~dpyv~v~~--~~~~~---~T~~~~~t~nP~W~e~f~f~v~--~--~~~~L~v~v~d~d 84 (524)
..+.|.|+.+....... ....+-||.+.+ |.... +|..+.-+.+|.|||.+.|++. + ....|.++||+..
T Consensus 218 ~~f~i~i~~~~~~~~~~-~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~ 296 (961)
T 1e7u_A 218 RKFRVKIRGIDIPVLPR-TADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGA 296 (961)
T ss_dssp SEEEEEEEEEECSSCCT-TSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEE
T ss_pred CceEEEEeecccccccC-CCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEecc
Confidence 35778888776422111 224567777654 44332 3444444567999999999863 3 3466999999864
Q ss_pred CCC----------------CCceeEEEEEEcccC
Q 009822 85 IIW----------------KSTVLGSVIVTVESE 102 (524)
Q Consensus 85 ~~~----------------~d~~iG~~~i~l~~~ 102 (524)
..+ +...||-+.++|-+-
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~ 330 (961)
T 1e7u_A 297 KPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDH 330 (961)
T ss_dssp C--------------------CEEEEEEEESBCT
T ss_pred cCccccccccccccccccccceeEEEEeeeeecC
Confidence 321 223677777776654
No 88
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=49.76 E-value=20 Score=41.01 Aligned_cols=69 Identities=19% Similarity=0.327 Sum_probs=46.4
Q ss_pred ceEEEEEEEEeecCcCCCCCCCCCcEEEEEE--CCeE----EeeeeecCCCCCccccEEEEEec--CC--CcEEEEEEEE
Q 009822 13 AYLIKLELLAAKNLIGANLNGTSDPYAIITC--GSEK----RFSSMVPGSRYPMWGEEFNFSVD--EL--PVQIIVTIYD 82 (524)
Q Consensus 13 ~~~L~V~vi~A~~L~~~d~~g~~dpyv~v~~--~~~~----~~T~~~~~t~nP~W~e~f~f~v~--~~--~~~L~v~v~d 82 (524)
...+.|+|..+.++... ...+-||.+.+ |... ..|..+.-..+|.|||.+.|++. +. ...|.|+||+
T Consensus 352 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~ 428 (1092)
T 2y3a_A 352 NNPFQITLVKGNKLNTE---ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVYA 428 (1092)
T ss_dssp CSEEEEEECCCCCCCCC---SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECCC
T ss_pred CCCEEEEEEEeccCCCC---CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEEE
Confidence 35688999999888654 34566766543 4433 23444444678999999999863 33 4569999998
Q ss_pred cC
Q 009822 83 WD 84 (524)
Q Consensus 83 ~d 84 (524)
..
T Consensus 429 ~~ 430 (1092)
T 2y3a_A 429 VL 430 (1092)
T ss_dssp C-
T ss_pred ec
Confidence 64
No 89
>1zyi_A Methylosome subunit picln; PH domain, cell volume regulation, RNA splicing, translation; NMR {Canis lupus familiaris}
Probab=48.91 E-value=37 Score=29.73 Aligned_cols=58 Identities=12% Similarity=0.280 Sum_probs=41.1
Q ss_pred eeeeeccceeeEEEeecceEEEEeccCcceeEEEEeccccc--cccccccceecCcEEEEEec
Q 009822 183 CVIERSFLYHGRMYVSAWHICFHSNAFSRQMKVIIPIGDID--EIQRSQHAFINPAITIILRM 243 (524)
Q Consensus 183 c~l~~~~~~~Gr~yit~~~~cF~s~~~g~~~~~~i~~~~i~--~i~k~~~~~~~~~i~i~~~~ 243 (524)
+.+....+-.|.||||++.|.|.+. ...-+.||+..|. .|.+....+-.+.|.+.+..
T Consensus 34 ~vl~~~~~g~GtLyVt~~~l~W~~~---~~~G~sI~YpsIsLHAIsrd~~~~p~~clY~Qld~ 93 (171)
T 1zyi_A 34 AVLNGKGLGTGTLYIAESRLSWLDG---SGLGFSLEYPTISLHAVSRDLNAYPREHLYVMVNA 93 (171)
T ss_dssp EEBTTBCCCEEEEEEETTEEEEEET---TTEEEEESSCCCSEEECCSSCSSCCSCCEEEEEEC
T ss_pred EEECCCccCceEEEEEcCEEEEEcC---CCcEEEeecCeEEEEEEecCCCCCCCceEEEEEec
Confidence 4444445578999999999999986 3578999999984 56665544334577666643
No 90
>3f08_A Uncharacterized protein Q6HG14; NESG Q6HG14_bachk Q6HG14 BUR153, structural genomics, PSI-2; 2.20A {Bacillus thuringiensis serovar konkukiorganism_taxid} SCOP: d.129.3.8 PDB: 3cnw_A
Probab=44.00 E-value=1.4e+02 Score=24.85 Aligned_cols=131 Identities=11% Similarity=0.072 Sum_probs=67.2
Q ss_pred eeeEEecCHHHHHHHHcCCCCchHHHHHHHcCCcceEeccccccCCCCCcEEEEEEEeeccCCCCCceeeEeEEEEEE-e
Q 009822 340 YNDVFPCTAEQFFTLLFSDDSKFTNEYRAARKDSNLVMGQWHAADEYDGQVREVAFRSLCKSPIYPRDTAMTESQHAV-L 418 (524)
Q Consensus 340 ~~~~~~~s~~~lf~~lf~d~s~f~~~~~~~~~~~~i~~~~W~~~~~~~~~~R~~~y~~~~~~~~gpk~~~~~~~Q~~~-~ 418 (524)
.+.++++|++++|.++ +|-.. +.++.-..... .+.. |+..|.++|. -| ..+ .+++. .
T Consensus 6 ~si~I~Ap~~~VW~~l-~d~~~-~~~w~p~v~~~-----~~~~----GG~vR~~~~~------~G---~~~--~Erl~~~ 63 (146)
T 3f08_A 6 TSMEIFGSTEQVWQLI-GGFNS-LPDWLPYIPSS-----KLTE----GGRVRHLANP------DG---ETI--IERLEVF 63 (146)
T ss_dssp EEEEESSCHHHHHHHH-CSTTC-HHHHCTTCCEE-----EEEG----GGTEEEEECT------TS---CEE--EEEEEEE
T ss_pred EEEEEeCCHHHHHHHH-hcccc-HHHhCCCeEEE-----EEeC----CCeEEEEEeC------CC---CEE--EEEEEEE
Confidence 4567899999999965 43323 34333222211 2221 2567876541 12 122 23333 3
Q ss_pred cCCCCeEEEEEEEeeCCCCCCCeEEEEEEEEEEe-eCCCCeEEEEEEEEEEeeeceeeeeeeccHHHHHHHHHHHHHHHH
Q 009822 419 SPDKKIFVFETVQQAHDVPFGSYFEIHGRWHLET-IAENSSTIDIKVGAHFKKWCVIQFKIKTGAVNKYKKEVELMLETA 497 (524)
Q Consensus 419 ~~~~~~~vv~~~~~~~dVPygd~F~v~~r~~i~~-~~~~~c~l~v~~~V~f~K~t~~K~~Ie~~~~~~~~~~~~~~~~~~ 497 (524)
.+++..|.....- .+.|+. .....|.+.+ .++++|+|.-.+.+. - .+.-...+.+.+...|+.-++.|
T Consensus 64 D~~~~~~~y~iv~--g~~~~~---~~~~~~~v~p~~~~~gt~v~w~~~~~--p----~g~~~~~~~~~~~~~~~~~L~~L 132 (146)
T 3f08_A 64 NDKERYYTYSIMN--APFPVT---NYLSTIQVKEGTESNTSLVEWSGTFT--P----VAVSDEEAINLVHGIYSDGLKAL 132 (146)
T ss_dssp ETTTTEEEEEEEE--CSSSEE---EEEEEEEEEECSSTTCEEEEEEEEEE--E----SSSCHHHHHHHHHHHHHHHHHHH
T ss_pred eCCCCEEEEEEec--CCCcee---EEEEEEEEEEecCCCcEEEEEEEEEE--e----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 4334455444332 356642 2355777888 466788877666665 1 22222233444455555556665
Q ss_pred HHHHhh
Q 009822 498 RSYIKI 503 (524)
Q Consensus 498 ~~~l~~ 503 (524)
++.++.
T Consensus 133 k~~~e~ 138 (146)
T 3f08_A 133 QHAFLD 138 (146)
T ss_dssp HHHTTC
T ss_pred HHHHhh
Confidence 555543
No 91
>1w7p_D VPS36P, YLR417W; ESCRT-II complex, endosomal protein sorting, protein transpo; 3.60A {Saccharomyces cerevisiae} SCOP: a.4.5.54 a.4.5.54
Probab=40.88 E-value=5.7 Score=41.84 Aligned_cols=41 Identities=17% Similarity=0.296 Sum_probs=0.0
Q ss_pred eeeEEEeecceEEEEeccCcceeEEEEeccccccccccccc
Q 009822 191 YHGRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQHA 231 (524)
Q Consensus 191 ~~Gr~yit~~~~cF~s~~~g~~~~~~i~~~~i~~i~k~~~~ 231 (524)
-.|++|+|.++|||--..-.....+.|+|++|..++...+.
T Consensus 43 q~G~~yLTShRiiyvD~~~p~~~s~~l~L~~I~~~e~~agf 83 (566)
T 1w7p_D 43 QRGRIFLTSQRIIYIDDAKPTQNSLGLELDDLAYVNYSSGF 83 (566)
T ss_dssp -----------------------------------------
T ss_pred cCceEEEEeeeEEEecCCCCcceEEEEEhHHcceeeeeecc
Confidence 45999999999999766555557889999999999987665
No 92
>3ie5_A Phenolic oxidative coupling protein HYP-1; hypericin, ST JOHN'S WORT, depression, allergy, PR-10 protein, cytokinin, plant hormones; HET: PGE PG4 PE8 1PE; 1.69A {Hypericum perforatum} SCOP: d.129.3.0
Probab=35.58 E-value=2.1e+02 Score=24.54 Aligned_cols=148 Identities=11% Similarity=0.065 Sum_probs=76.9
Q ss_pred ceeeeeEEecCHHHHHHHHcCCCCchHHHHH-HHcCCcceEeccccccCCCCCcEEEEEEEeeccCCCCCceeeEeEEEE
Q 009822 337 VGIYNDVFPCTAEQFFTLLFSDDSKFTNEYR-AARKDSNLVMGQWHAADEYDGQVREVAFRSLCKSPIYPRDTAMTESQH 415 (524)
Q Consensus 337 ~~~~~~~~~~s~~~lf~~lf~d~s~f~~~~~-~~~~~~~i~~~~W~~~~~~~~~~R~~~y~~~~~~~~gpk~~~~~~~Q~ 415 (524)
+.-.+.+.++|++++|.++..|-.....+.+ ......++..+.. ..+..|.++|. .-+| ... .+++
T Consensus 11 ~~~~ev~i~a~a~kvw~~~v~d~~~l~pk~~P~~v~s~e~~eGdg-----~~Gsir~~~~~-----~g~~-~~~--~kEr 77 (165)
T 3ie5_A 11 TIVKEEESPIAPHRLFKALVLERHQVLVKAQPHVFKSGEIIEGDG-----GVGTVTKITFV-----DGHP-LTY--MLHK 77 (165)
T ss_dssp EEEEEEEESSCHHHHHHHHTTTHHHHHHHHCTTTEEEEEEEESSS-----STTCEEEEEEC-----TTSS-CCE--EEEE
T ss_pred EEEEEEEecCCHHHHHHHhcCCccccchhhCCcccceEEEecCCC-----CCCeEEEEEec-----CCCC-Cce--EEEE
Confidence 3455778899999999998664222223333 1223333334431 13578999884 2233 222 2344
Q ss_pred EE-ecCCCCeEEEEEEEeeCCCC--CCCeEEEEEEEEEEeeCCCCeEEEEEEEEEEeeeceeeeeeeccHHHHHHHHHHH
Q 009822 416 AV-LSPDKKIFVFETVQQAHDVP--FGSYFEIHGRWHLETIAENSSTIDIKVGAHFKKWCVIQFKIKTGAVNKYKKEVEL 492 (524)
Q Consensus 416 ~~-~~~~~~~~vv~~~~~~~dVP--ygd~F~v~~r~~i~~~~~~~c~l~v~~~V~f~K~t~~K~~Ie~~~~~~~~~~~~~ 492 (524)
+. ...++..|..... --+++ .=.+|....+.. .++++|.+. +.++|.+-. -..+.-...+..++....
T Consensus 78 l~~iD~~~~~~~Y~ii--eG~~l~~~~~~y~~~i~v~---~~~ggs~vk--wt~~y~~~~--~~~~~~e~~k~~~~~~~~ 148 (165)
T 3ie5_A 78 FDEIDAANFYCKYTLF--EGDVLRDNIEKVVYEVKLE---AVGGGSKGK--ITVTYHPKP--GCTVNEEEVKIGEKKAYE 148 (165)
T ss_dssp EEEEEGGGTEEEEEEE--EEGGGTTTEEEEEEEEEEE---EETTEEEEE--EEEEEEECT--TCCCCHHHHHHHHHHHHH
T ss_pred EEEEchhcCEEEEEEe--cCCCCccceEEEEEEEEEE---eCCCceEEE--EEEEEEECC--CCCCCHHHHHHHHHHHHH
Confidence 55 3333344444332 12222 123555555554 345577644 444454411 112222334456788888
Q ss_pred HHHHHHHHHhhcCC
Q 009822 493 MLETARSYIKICTS 506 (524)
Q Consensus 493 ~~~~~~~~l~~~~~ 506 (524)
+++.++.+|-.+..
T Consensus 149 ~~K~ie~yllanp~ 162 (165)
T 3ie5_A 149 FYKQVEEYLAANPE 162 (165)
T ss_dssp HHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHhChh
Confidence 99999999987754
No 93
>3k3k_A Abscisic acid receptor PYR1; ABA receptor, plant hormone receptor, A sensor, drought tolerance, plant development; HET: A8S; 1.70A {Arabidopsis thaliana} PDB: 3njo_A* 3qn1_A* 3k90_A* 3zvu_A* 3jrq_B* 3kdj_A* 3nef_A* 3neg_A* 3nmn_A* 3kay_A*
Probab=34.68 E-value=2.6e+02 Score=25.21 Aligned_cols=111 Identities=12% Similarity=0.119 Sum_probs=56.4
Q ss_pred cceeeeeEEecCHHHHHHHHcCCCCchHHHHHHHcCCcceEeccccccCC-CCCcEEEEEEEeeccCCCCCceeeEeEEE
Q 009822 336 LVGIYNDVFPCTAEQFFTLLFSDDSKFTNEYRAARKDSNLVMGQWHAADE-YDGQVREVAFRSLCKSPIYPRDTAMTESQ 414 (524)
Q Consensus 336 ~~~~~~~~~~~s~~~lf~~lf~d~s~f~~~~~~~~~~~~i~~~~W~~~~~-~~~~~R~~~y~~~~~~~~gpk~~~~~~~Q 414 (524)
...++..+++.|++++|.++ +|-.. +..++- .+....+...+. ..+..|.++|.- -.|. ..+. +
T Consensus 50 c~~~v~~~I~ApadkVW~lv-~dF~~-l~~w~p-----~V~s~e~~eGd~g~vGsVR~lt~~~-----G~p~-~~vk--E 114 (211)
T 3k3k_A 50 CSSLHAQRIHAPPELVWSIV-RRFDK-PQTYKH-----FIKSCSVEQNFEMRVGCTRDVIVIS-----GLPA-NTST--E 114 (211)
T ss_dssp EEEEEEEEESSCHHHHHHHH-TCTTC-GGGTCS-----SEEEEECCTTCCCCTTCEEEEEESS-----SSSC-EEEE--E
T ss_pred EeEEEEEEEcCCHHHHHHHH-hCcCC-hhHcCc-----cceEEEEecCCCCCCCcEEEEEecC-----CCcc-ceEE--E
Confidence 35577889999999999976 43111 222211 222222222211 126789888641 1231 2333 3
Q ss_pred EEE-ecCCCCeEEEEEEEeeCCCCCCCeEEEEEEEEEEeeCCCCeEEEEEEEEEEee
Q 009822 415 HAV-LSPDKKIFVFETVQQAHDVPFGSYFEIHGRWHLETIAENSSTIDIKVGAHFKK 470 (524)
Q Consensus 415 ~~~-~~~~~~~~vv~~~~~~~dVPygd~F~v~~r~~i~~~~~~~c~l~v~~~V~f~K 470 (524)
++. +.+++..|.....- .++||.++- ..+.+.+.+.++ |.+.+.|.+
T Consensus 115 rL~~lDd~~~~~sYsIie--g~lpv~~Y~---sti~V~p~~~gg----V~Wt~~fes 162 (211)
T 3k3k_A 115 RLDILDDERRVTGFSIIG--GEHRLTNYK---SVTTVHRFEKEN----RIWTVVLES 162 (211)
T ss_dssp EEEEEETTTTEEEEEEEE--ETTGGGTCE---EEEEEEEEEETT----EEEEEEEEE
T ss_pred EEEEEeccCCEEEEEEee--cCcceeEEE---EEEEEEECCCCC----EEEEEEEEE
Confidence 444 34444454443332 468887664 334456655443 666666653
No 94
>2d4r_A Hypothetical protein TTHA0849; start domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.40A {Thermus thermophilus} SCOP: d.129.3.6
Probab=32.41 E-value=1.8e+02 Score=22.88 Aligned_cols=80 Identities=10% Similarity=0.143 Sum_probs=45.4
Q ss_pred EEecCCCCeEEEEEEEeeCCCCCCCeEEEEEEEEEEeeCCCCeEEEEEEEEEEeeeceeeeeeeccHHHHHHHHHHHHHH
Q 009822 416 AVLSPDKKIFVFETVQQAHDVPFGSYFEIHGRWHLETIAENSSTIDIKVGAHFKKWCVIQFKIKTGAVNKYKKEVELMLE 495 (524)
Q Consensus 416 ~~~~~~~~~~vv~~~~~~~dVPygd~F~v~~r~~i~~~~~~~c~l~v~~~V~f~K~t~~K~~Ie~~~~~~~~~~~~~~~~ 495 (524)
+.....+..+...... + |+ ..| ...|.|++.+++ |+|.......+.. .++..++..-...-+.+.++..++
T Consensus 66 ~~~~~~~~~i~~~~~~---g-~~-~~~--~~~~~~~~~~~g-T~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~ 136 (147)
T 2d4r_A 66 EEWDDENLRNRFFSPE---G-DF-DRY--EGTWVFLPEGEG-TRVVLTLTYELTI-PIFGGLLRKLVQKLMQENVESLLK 136 (147)
T ss_dssp EEEETTTTEEEEEEEE---E-SC-SEE--EEEEEEEECSSS-EEEEEEEEEECCC-TTTTTTTHHHHHHHHHHHHHHHHH
T ss_pred EEEcCCCcEEEEEecc---C-Ch-hhe--EEEEEEEECCCC-cEEEEEEEEecCC-ccHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333344566665432 1 33 233 668999988765 8888777766542 234444433333344566777777
Q ss_pred HHHHHHhhc
Q 009822 496 TARSYIKIC 504 (524)
Q Consensus 496 ~~~~~l~~~ 504 (524)
.+++.++..
T Consensus 137 ~lk~~~e~~ 145 (147)
T 2d4r_A 137 GLEERVLAA 145 (147)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhh
Confidence 777766653
No 95
>2l9p_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Staphylococcus epidermidis}
Probab=31.04 E-value=2.3e+02 Score=23.63 Aligned_cols=148 Identities=9% Similarity=0.065 Sum_probs=70.8
Q ss_pred ceeeeeEEecCHHHHHHHHcCCCCchHHHHHHHcCCcceEeccccccCCCCCcEEEEEEEeeccCCCCCceeeEeEEEEE
Q 009822 337 VGIYNDVFPCTAEQFFTLLFSDDSKFTNEYRAARKDSNLVMGQWHAADEYDGQVREVAFRSLCKSPIYPRDTAMTESQHA 416 (524)
Q Consensus 337 ~~~~~~~~~~s~~~lf~~lf~d~s~f~~~~~~~~~~~~i~~~~W~~~~~~~~~~R~~~y~~~~~~~~gpk~~~~~~~Q~~ 416 (524)
...++.+|+.|++++|.++-. ...+.++. +...+..........-|+. +.|... .+-|. .. ..-++
T Consensus 9 ~i~~~~~i~Ap~e~Vw~a~td--pe~~~~W~---~p~~~~~~~~~~d~~~Gg~---~~~~~~--~~~G~---~~-~~g~v 74 (164)
T 2l9p_A 9 KIIFTRTFSAPINKVFDAYTK--RELFEQWF---HPQDASVTVYDFNATKGGS---AFYAIQ--APQMI---SY-TIAEY 74 (164)
T ss_dssp EEEECCEESSCHHHHHHHHHC--HHHHTTTC---CCTTCEEEEEECCCSTTEE---EEEEEE--ETTEE---EE-EEEEE
T ss_pred eEEEEEEeCCCHHHHHHHhCC--HHHHHhcc---CCCCceeeEEEEeccCCCE---EEEEEE--CCCCC---EE-EEEEE
Confidence 456789999999999999865 33333322 1111111111111111222 333321 11121 11 22233
Q ss_pred EecCCCCeEEEEEEEeeC-CCCCCCeEEEEEEEEEEeeCCCCeEEEEEEEEEEeeeceeeeeeeccHHHHHHHHHHHHHH
Q 009822 417 VLSPDKKIFVFETVQQAH-DVPFGSYFEIHGRWHLETIAENSSTIDIKVGAHFKKWCVIQFKIKTGAVNKYKKEVELMLE 495 (524)
Q Consensus 417 ~~~~~~~~~vv~~~~~~~-dVPygd~F~v~~r~~i~~~~~~~c~l~v~~~V~f~K~t~~K~~Ie~~~~~~~~~~~~~~~~ 495 (524)
......+.+++....... +.|-++-......|.|+..+ ++|+|.+... |.........++ .++...+...++
T Consensus 75 ~e~~p~~rl~~t~~~~~~~g~p~~~~~~~~v~~~l~~~~-~gT~l~~~~~--~~~~~~~~~~~~----~~~~~Gw~~~L~ 147 (164)
T 2l9p_A 75 LQVDAPYYIEYLDYFATSKGEKDTSMPGMHITLNFEEVK-GKTTVTSTST--FPTESAAQQAID----MGVETGMNSTLN 147 (164)
T ss_dssp SCCBTTTEEEEEEEEEBTTBSCCSSSCCEEEEEEECCCS-SSEEEEEEEE--CSSTTHHHHHHH----HTHHHHHHHHHH
T ss_pred EEEcCCCEEEEEEEecCCCCCccCCCCceEEEEEEEECC-CCEEEEEEEE--cCCHHHHHHHHH----hhHHHHHHHHHH
Confidence 333345677776654332 24432212256677787765 4788888753 422100011111 145666777777
Q ss_pred HHHHHHhhcC
Q 009822 496 TARSYIKICT 505 (524)
Q Consensus 496 ~~~~~l~~~~ 505 (524)
.|.+.|+...
T Consensus 148 ~L~~~le~~~ 157 (164)
T 2l9p_A 148 QLEKLLNQKL 157 (164)
T ss_dssp HHHHHHHSSC
T ss_pred HHHHHHHHhh
Confidence 7777776543
No 96
>3kl1_A PYL2, putative uncharacterized protein AT2G26040; abscisic acid receptor, crystal, high resolution, PP2C, HORM receptor; 1.55A {Arabidopsis thaliana} PDB: 3kdi_A* 3kdh_A 3nr4_A* 3ns2_A* 3nj0_A* 3nj1_A* 3nmh_A* 3kaz_A 3kb0_A* 3kb3_A* 3ujl_A* 3nmp_A* 3nmt_A* 3nmv_A*
Probab=30.48 E-value=2.8e+02 Score=24.40 Aligned_cols=147 Identities=16% Similarity=0.162 Sum_probs=74.1
Q ss_pred cceeeeeEEecCHHHHHHHHcCCCCchHHHHHHHcCCcceEeccccccCCCCCcEEEEEEEeeccCCCCCceeeEeEEEE
Q 009822 336 LVGIYNDVFPCTAEQFFTLLFSDDSKFTNEYRAARKDSNLVMGQWHAADEYDGQVREVAFRSLCKSPIYPRDTAMTESQH 415 (524)
Q Consensus 336 ~~~~~~~~~~~s~~~lf~~lf~d~s~f~~~~~~~~~~~~i~~~~W~~~~~~~~~~R~~~y~~~~~~~~gpk~~~~~~~Q~ 415 (524)
...++..+++.|++++|.++-.-+. ...+....+..++.-+. ...+..|.++|.- -+| ...+.| +
T Consensus 35 ~~~~~~~~I~Apa~~vW~lv~df~~--~~~w~p~I~s~e~~eGd-----g~vGsVR~~t~~~-----G~p-~~~vkE--r 99 (190)
T 3kl1_A 35 CTSLITQRIHAPASVVWPLIRRFDN--PERYKHFVKRCRLISGD-----GDVGSVREVTVIS-----GLP-ASTSTE--R 99 (190)
T ss_dssp EEEEEEEEESSCHHHHHHHHHCTTC--GGGTCSSEEEEEEEESS-----SSTTCEEEEEECS-----SSS-CEEEEE--E
T ss_pred eeEEEEEEecCCHHHHHHHHhCCCC--hhHcccccCEEEEEcCC-----CCCCeEEEEEecC-----CCc-cceEEE--E
Confidence 3457788999999999998754222 22222222222222222 2136789998841 223 223333 4
Q ss_pred EE-ecCCCCeEEEEEEEeeCCCCCCCeEEEEEEEEEEe--eCCCCeEEEEEEEEEEeeeceeeeeeeccHHHHHHHHHHH
Q 009822 416 AV-LSPDKKIFVFETVQQAHDVPFGSYFEIHGRWHLET--IAENSSTIDIKVGAHFKKWCVIQFKIKTGAVNKYKKEVEL 492 (524)
Q Consensus 416 ~~-~~~~~~~~vv~~~~~~~dVPygd~F~v~~r~~i~~--~~~~~c~l~v~~~V~f~K~t~~K~~Ie~~~~~~~~~~~~~ 492 (524)
+. +..++..|..... -.++|..++-.+..-.-+.. .++++|.+.-++.+. ...+.=+..+..-+...|+.
T Consensus 100 L~~iD~~~~~~sY~ii--eG~~~~~~Y~s~~~v~~~~~~~~~~~gt~V~Ws~~f~-----~p~g~~~e~~~~~~~~~~~~ 172 (190)
T 3kl1_A 100 LEFVDDDHRVLSFRVV--GGEHRLKNYKSVTSVNEFLNQDSGKVYTVVLESYTVD-----IPEGNTEEDTKMFVDTVVKL 172 (190)
T ss_dssp EEEEETTTTEEEEEEE--EESSSCCSCEEEEEEEEEEC-CCCCEEEEEEEEEEEE-----CCTTCCHHHHHHHHHHHHHH
T ss_pred EEEEeccCCEEEEEEE--ecCCccccEEEEEEEEecccccCCCCcEEEEEEEEEE-----cCCCCCHHHHHHHHHHHHHH
Confidence 54 3444444444332 24788777766655555544 344566665554442 11111112233334455566
Q ss_pred HHHHHHHHHhhc
Q 009822 493 MLETARSYIKIC 504 (524)
Q Consensus 493 ~~~~~~~~l~~~ 504 (524)
-++.|++.++..
T Consensus 173 gL~~L~~~~e~~ 184 (190)
T 3kl1_A 173 NLQKLGVAATSA 184 (190)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHHHhcc
Confidence 666666665543
No 97
>3put_A Hypothetical conserved protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.83A {Rhizobium etli cfn 42} PDB: 3otl_A*
Probab=30.05 E-value=2.5e+02 Score=23.66 Aligned_cols=144 Identities=6% Similarity=-0.035 Sum_probs=74.8
Q ss_pred ceeeeeEEecCHHHHHHHHcCCCCchHHHHHHHc-CCcc-eEeccccccCCCCCcEEEEEEEeeccCCCCCceeeEeEEE
Q 009822 337 VGIYNDVFPCTAEQFFTLLFSDDSKFTNEYRAAR-KDSN-LVMGQWHAADEYDGQVREVAFRSLCKSPIYPRDTAMTESQ 414 (524)
Q Consensus 337 ~~~~~~~~~~s~~~lf~~lf~d~s~f~~~~~~~~-~~~~-i~~~~W~~~~~~~~~~R~~~y~~~~~~~~gpk~~~~~~~Q 414 (524)
...++.+|+.|++++|+++-. +..+.++..-. +..- ....++.. |+. +.|... .+-|.. ....-
T Consensus 10 ~i~~~r~i~Ap~e~Vw~a~Td--pe~l~~W~~~~~~~~~~~~~~d~~~----GG~---~~~~~~--~~~G~~---~~~~g 75 (166)
T 3put_A 10 TFVIERRLTAPVARVFRAWST--PESKRQWFACHGEWVPLEYALDFRP----GGT---ERNYTA--DTDGLL---HAYDA 75 (166)
T ss_dssp EEEEEEEESSCHHHHHHHHHC--HHHHHHHHTCC---CCSEEEECCST----TCE---EEEEEE--CTTSCE---EEEEE
T ss_pred eEEEEEEECCCHHHHHHHhCC--HHHHHhcCCCCCCceeeEEEeCccc----CCE---EEEEEE--CCCCCE---EEEEE
Confidence 457789999999999999964 44555554321 1111 11223332 332 233321 122321 11112
Q ss_pred EEEecCCCCeEEEEEEEeeCCCCCCCeEEEEEEEEEEeeCCCCeEEEEEEEEEEeeeceeeeeeeccHHHHHHHHHHHHH
Q 009822 415 HAVLSPDKKIFVFETVQQAHDVPFGSYFEIHGRWHLETIAENSSTIDIKVGAHFKKWCVIQFKIKTGAVNKYKKEVELML 494 (524)
Q Consensus 415 ~~~~~~~~~~~vv~~~~~~~dVPygd~F~v~~r~~i~~~~~~~c~l~v~~~V~f~K~t~~K~~Ie~~~~~~~~~~~~~~~ 494 (524)
++......+.+++.......+-|.+ .....|.|+..+ ++|+|.+.-...+.-. ....+++...+...+
T Consensus 76 ~v~ev~p~~rlv~t~~~~~~~~~~~---~s~vt~~l~~~~-~gT~ltl~~~~~~~~~--------~~~~~~~~~GW~~~L 143 (166)
T 3put_A 76 RYIDIVPDTRIIYAYEMKLGQTRIS---ASLVTVAFDVEP-SGTRMVFTEQVVFLDG--------YGDNGARLQGTEIGL 143 (166)
T ss_dssp EEEEEETTTEEEEEEEEEETTEEEE---EEEEEEEEEECS-SSEEEEEEEEEEEETT--------CCCTTHHHHHHHHHH
T ss_pred EEEEEcCCcEEEEEEEecCCCCCCC---ceEEEEEEEECC-CCEEEEEEEEecCccc--------hhhHHHHHHHHHHHH
Confidence 2332223456666554322232211 245677888776 5788888754432111 112456777888888
Q ss_pred HHHHHHHhhcCC
Q 009822 495 ETARSYIKICTS 506 (524)
Q Consensus 495 ~~~~~~l~~~~~ 506 (524)
+.|+++|+...+
T Consensus 144 ~~L~~~le~~~~ 155 (166)
T 3put_A 144 DNLELFLVRETS 155 (166)
T ss_dssp HHHHHHHHHHC-
T ss_pred HHHHHHHhcCCC
Confidence 888888876544
No 98
>1t17_A Conserved hypothetical protein; beta-alpha-beta-BETA-beta-BETA-beta-BETA-helix, structural G protein structure initiative, PSI, NESG; NMR {Caulobacter crescentus} SCOP: d.129.3.6
Probab=29.70 E-value=47 Score=27.58 Aligned_cols=25 Identities=12% Similarity=0.458 Sum_probs=20.4
Q ss_pred EEEEEEEEeeCCCCeEEEEEEEEEEe
Q 009822 444 IHGRWHLETIAENSSTIDIKVGAHFK 469 (524)
Q Consensus 444 v~~r~~i~~~~~~~c~l~v~~~V~f~ 469 (524)
...+|.|++.+++ |+|......+|.
T Consensus 91 ~~g~w~f~~~~~g-t~v~~~~~~~~~ 115 (148)
T 1t17_A 91 LNNGWRFMPEGDA-TRVEFVIEFAFK 115 (148)
T ss_dssp EEEEEEEEEETTE-EEEEEEEEECCS
T ss_pred cEEEEEEEECCCC-eEEEEEEEEEEC
Confidence 4899999998876 888887777774
No 99
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=29.59 E-value=96 Score=24.66 Aligned_cols=46 Identities=7% Similarity=0.086 Sum_probs=30.8
Q ss_pred EeecceEEEEeccCcceeEEEEeccccccccccccceecCcEEEEE
Q 009822 196 YVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQHAFINPAITIIL 241 (524)
Q Consensus 196 yit~~~~cF~s~~~g~~~~~~i~~~~i~~i~k~~~~~~~~~i~i~~ 241 (524)
.+..+.|+||.+.-....+-.|+|.++..|.......-.+.+.|.+
T Consensus 40 vL~~~~L~yy~~~~~~~~~g~i~L~~~~~v~~~~~~~~~~~F~i~~ 85 (126)
T 1fao_A 40 TLHRNELKYFKDQMSPEPIRILDLTECSAVQFDYSQERVNCFCLVF 85 (126)
T ss_dssp EEETTEEEEESSTTCSSCSEEEEGGGCCEEEEECSSSSSSEEEEEE
T ss_pred EEECCEEEEeCCCCCCCceeEEEccceEEEEecccCCCCCEEEEEe
Confidence 3456678888665455667789999998777654332234778877
No 100
>1ou8_A Stringent starvation protein B homolog; peptide-binding pocket, protein-peptide complex, homodimer, transport protein; 1.60A {Haemophilus influenzae} SCOP: b.136.1.1 PDB: 1zsz_A 1twb_A 1zsz_B
Probab=25.42 E-value=79 Score=25.43 Aligned_cols=38 Identities=18% Similarity=0.256 Sum_probs=33.7
Q ss_pred eeEEEeecceEEEEeccCcceeEEEEeccccccccccc
Q 009822 192 HGRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQ 229 (524)
Q Consensus 192 ~Gr~yit~~~~cF~s~~~g~~~~~~i~~~~i~~i~k~~ 229 (524)
-+.|.+.+..+.|....-|....+.||+..|..|-...
T Consensus 59 v~~L~i~nd~isF~ARFgGv~~~i~VP~~AV~aIyArE 96 (111)
T 1ou8_A 59 TGNLQLTNDFIQFNARFKGVSRELYIPMGAALAIYARE 96 (111)
T ss_dssp CEEEEECSSEEEEEEEETTEEEEEEEEGGGEEEEEETT
T ss_pred hcCeEEeccEEEEEEEECCEeEEEEEehHhheEeeeec
Confidence 37789999999999999899999999999999987543
No 101
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=25.39 E-value=1e+02 Score=24.12 Aligned_cols=41 Identities=17% Similarity=0.289 Sum_probs=28.2
Q ss_pred eecceEEEEeccCcceeEEEEeccccccccccccceecCcEEEEE
Q 009822 197 VSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQHAFINPAITIIL 241 (524)
Q Consensus 197 it~~~~cF~s~~~g~~~~~~i~~~~i~~i~k~~~~~~~~~i~i~~ 241 (524)
+..+.|+||.+.-....+-.|+|.+++.|+... .+.+.|.+
T Consensus 32 L~~~~L~yy~~~~~~~~~g~i~l~~~~~v~~~~----~~~F~i~~ 72 (115)
T 2cod_A 32 FDGLSISYYNNEKEMYSKGIIPLSAISTVRVQG----DNKFEVVT 72 (115)
T ss_dssp ECSSEEEEEESSCCSSCCCEEETTTEEEEEEET----TTEEEEEE
T ss_pred EECCEEEEEcCCCCcccCCEEECCcceEEEeCC----CCEEEEEe
Confidence 345677777765444567789999998887654 34677776
No 102
>3tvq_A Multifunctional cyclase-dehydratase-3-O-methyl TR TCMN; tetracenomycin, aromatase, taxifolin, dihyroquercet helix-GRIP fold; HET: DQH; 1.67A {Streptomyces glaucescens} PDB: 2rer_A 2res_A 2rez_A
Probab=24.98 E-value=81 Score=27.27 Aligned_cols=58 Identities=9% Similarity=0.119 Sum_probs=35.8
Q ss_pred EEEEEEEEeeCCCCeEEEEEEEEEEeeeceeeeeeeccHHHHHHHHHHHHHHHHHHHHhhcC
Q 009822 444 IHGRWHLETIAENSSTIDIKVGAHFKKWCVIQFKIKTGAVNKYKKEVELMLETARSYIKICT 505 (524)
Q Consensus 444 v~~r~~i~~~~~~~c~l~v~~~V~f~K~t~~K~~Ie~~~~~~~~~~~~~~~~~~~~~l~~~~ 505 (524)
...+|.|++.+++ |+|.......|......- .....+.+...+...++.+++.++...
T Consensus 91 ~~g~W~f~p~~~g-t~V~~~~df~~~~~~p~~---~~~~~~av~~~~~~~L~~LK~~aE~~~ 148 (169)
T 3tvq_A 91 MNLHWTYRAVAGG-TEMRWVQEFDMKPGAPFD---NAHMTAHLNTTTRANMERIKKIIEDRH 148 (169)
T ss_dssp EEEEEEEEEETTE-EEEEEEEEEEECTTCSSC---HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeEEEEEECCCC-EEEEEEEEEEecCCCccc---HHHHHHHHHhhHHHHHHHHHHHHhhhh
Confidence 5679999999877 999888888875421111 111233444555666666666665443
No 103
>1yfn_A Stringent starvation protein B; protein-peptide complex, SSPB, RSEA, protein binding; 1.80A {Escherichia coli} SCOP: b.136.1.1 PDB: 1ox9_A 1ox8_A
Probab=24.51 E-value=83 Score=25.61 Aligned_cols=37 Identities=14% Similarity=0.176 Sum_probs=33.3
Q ss_pred eeEEEeecceEEEEeccCcceeEEEEecccccccccc
Q 009822 192 HGRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRS 228 (524)
Q Consensus 192 ~Gr~yit~~~~cF~s~~~g~~~~~~i~~~~i~~i~k~ 228 (524)
-+.|.+++..+.|....-|....+.||+..|..|-..
T Consensus 60 v~~L~i~nd~IsF~ARFgGv~~~i~VP~~AV~aIyAr 96 (118)
T 1yfn_A 60 VGNLELANDEVRFNARFGGIPRQVSVPLAAVLAIYAR 96 (118)
T ss_dssp CEEEEECSSEEEEEEEETTEEEEEEEEGGGEEEEEET
T ss_pred hcCeEEeccEEEEEEEECCEeEEEEEehHhheEeeee
Confidence 4779999999999999989999999999999998754
No 104
>1ou9_A Stringent starvation protein B homolog; SSRA peptide-binding protein, homodimer, transport protein; 1.80A {Haemophilus influenzae} SCOP: b.136.1.1 PDB: 1oul_A 1zsz_C
Probab=23.51 E-value=88 Score=25.84 Aligned_cols=37 Identities=19% Similarity=0.248 Sum_probs=33.2
Q ss_pred eeEEEeecceEEEEeccCcceeEEEEecccccccccc
Q 009822 192 HGRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRS 228 (524)
Q Consensus 192 ~Gr~yit~~~~cF~s~~~g~~~~~~i~~~~i~~i~k~ 228 (524)
-+.|.+.+.+|.|....-|....+.||+..|..|-..
T Consensus 59 v~~L~i~nd~IsF~ARFgGv~~~I~VP~~AV~aIyAr 95 (129)
T 1ou9_A 59 TGNLQLTNDFIQFNARFKGVSRELYIPMGAALAIYAR 95 (129)
T ss_dssp CEEEEECSSEEEEEEEETTEEEEEEEEGGGEEEEEET
T ss_pred hcCeEEeccEEEEEEEECCEeEEEEEehHheeEeeec
Confidence 3779999999999999989999999999999998754
No 105
>2gcl_A Hypothetical 63.0 kDa protein in DAK1-ORC1 intergenic region; chromaint, double PH domain, yfact, DNA replication, RPA; 2.21A {Saccharomyces cerevisiae} SCOP: b.55.1.10 PDB: 2gcj_A
Probab=21.92 E-value=1.5e+02 Score=27.67 Aligned_cols=70 Identities=20% Similarity=0.364 Sum_probs=46.7
Q ss_pred eeeeeeeeccceeeEEEeecceEEEEeccCcceeEEEEeccccccccccc-cce--ecC--cEEEEEecCCCCCCCCCCC
Q 009822 180 SYSCVIERSFLYHGRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQ-HAF--INP--AITIILRMGAGGHGVPPLG 254 (524)
Q Consensus 180 ~~~c~l~~~~~~~Gr~yit~~~~cF~s~~~g~~~~~~i~~~~i~~i~k~~-~~~--~~~--~i~i~~~~~~~~~~~~~~~ 254 (524)
...|.+.. -.|-||.-++.+-|- .+-.+.||++||.+|+-.. +.. ... .+.|.++.
T Consensus 166 ~Vkcs~ka---~eG~LypL~~gflF~-----~KP~~~i~~~~I~sV~fsrvg~~~~~~rTFdl~v~~k~----------- 226 (261)
T 2gcl_A 166 AVSCSFKA---NEGYLYPLDNAFFFL-----TKPTLYIPFSDVSMVNISRAGQTSTSSRTFDLEVVLRS----------- 226 (261)
T ss_dssp CEEEEETT---EEEEEEECSSEEEEE-----SSSCEEEEGGGEEEEEEEC--------CEEEEEEEEST-----------
T ss_pred eEEEeccC---CceEEEEecCceEEe-----eCCcEEEEhhHeeEEEEEeccCCcccCceEEEEEEEcC-----------
Confidence 44566653 459999999999884 3567899999999999654 210 111 57777763
Q ss_pred CCCCceeEEEeeeechHH
Q 009822 255 SPDGRVRYKFASFWNRNH 272 (524)
Q Consensus 255 ~~~~~~~~~f~sf~~rd~ 272 (524)
|...|.|++. +|++
T Consensus 227 ---g~~~~~Fs~I-dreE 240 (261)
T 2gcl_A 227 ---NRGSTTFANI-SKEE 240 (261)
T ss_dssp ---TCCEEEEEEE-EGGG
T ss_pred ---CCccEEEccc-CHHH
Confidence 3368999776 4443
No 106
>1y5o_A TFB1, RNA polymerase II transcription factor B 73 kDa subunit; TFIIH, PH domain, phosphoinositides, VP16; NMR {Saccharomyces cerevisiae} SCOP: b.55.1.9 PDB: 2gs0_A 2k2u_A 2l2i_A 2lox_A*
Probab=20.42 E-value=3.4e+02 Score=21.86 Aligned_cols=54 Identities=13% Similarity=0.268 Sum_probs=39.5
Q ss_pred eeeeeeccceeeEEEeecc----eEEEEeccCcceeEEEEeccccccccccccceecC--cEEEEEe
Q 009822 182 SCVIERSFLYHGRMYVSAW----HICFHSNAFSRQMKVIIPIGDIDEIQRSQHAFINP--AITIILR 242 (524)
Q Consensus 182 ~c~l~~~~~~~Gr~yit~~----~~cF~s~~~g~~~~~~i~~~~i~~i~k~~~~~~~~--~i~i~~~ 242 (524)
.|.+.+ ..|-|.|++. .|-+.+ .-| ...+.||+..|+.++-++.. .+ -++|.-+
T Consensus 6 aa~yKK---k~G~lti~eD~~p~~l~W~p-~~g-~~~isI~l~~It~LQqTp~t--s~KvmLKI~~k 65 (115)
T 1y5o_A 6 AAIFEK---VSGIIAINEDVSPAELTWRS-TDG-DKVHTVVLSTIDKLQATPAS--SEKMMLRLIGK 65 (115)
T ss_dssp EEESSS---CEEEEEEECSSSSCEEEEEE-SSS-SCEEEEESTTCSEEEECCTT--CSSEEEEEEEC
T ss_pred eeEEEe---cccEEEEccCCCcceEEEEE-CCC-CccEEEEhhhhhhhhcCCCC--CCceEEEEEEe
Confidence 345543 4699999998 888887 446 55699999999999987765 34 4566654
Done!