BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009825
(524 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6ZY51|PWD_ARATH Phosphoglucan, water dikinase, chloroplastic OS=Arabidopsis thaliana
GN=GWD3 PE=1 SV=1
Length = 1196
Score = 675 bits (1742), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/527 (66%), Positives = 416/527 (78%), Gaps = 12/527 (2%)
Query: 8 IIFQVSKLCTLLLKAVRSTLGSQGWDVLVPGAAVGKLVQVDRISPGSLSSSGDEPVILAV 67
IIFQ+SKLCT+LLKAVR++LGS+GWDV+VPG+ G LVQV+ I PGSL ++ P+IL V
Sbjct: 670 IIFQISKLCTVLLKAVRNSLGSEGWDVVVPGSTSGTLVQVESIVPGSLPATSGGPIILLV 729
Query: 68 SKADGDEEVAAAGSNILGVILLQELPHLSHLGVRARQEKVVFVTCEDDEKVSDIERLAGK 127
+KADGDEEV+AA NI GV+LLQELPHLSHLGVRARQEK+VFVTC+DD+KV+DI RL GK
Sbjct: 730 NKADGDEEVSAANGNIAGVMLLQELPHLSHLGVRARQEKIVFVTCDDDDKVADIRRLVGK 789
Query: 128 YVRLEASSTCVNL-----------NPYITHGNDGNFGLKTLSGSSSSTVLVRGVHVSSFS 176
+VRLEAS + VNL T D N K + S ++ S S
Sbjct: 790 FVRLEASPSHVNLILSTEGRSRTSKSSATKKTDKNSLSKKKTDKKSLSIDDEESKPGSSS 849
Query: 177 ASKAPMSSQGVSTGVILLADADADAMTSGAKAAACGRLASLSAVSEKVYSDQGVPASFLV 236
++ SS+ + +G I+ A ADAD TSG+K+AACG LASL+ S KV+S+ GVPASF V
Sbjct: 850 SNSLLYSSKDIPSGGII-ALADADVPTSGSKSAACGLLASLAEASSKVHSEHGVPASFKV 908
Query: 237 PAGVVIPFGSMQLALEQSKCMDTFVSFLEQIETAGPEGGELDNLCCQLQELISALQPSED 296
P GVVIPFGSM+LAL+Q+ + F S LE++ETA PEGGELD++C Q+ E++ LQ ++
Sbjct: 909 PTGVVIPFGSMELALKQNNSEEKFASLLEKLETARPEGGELDDICDQIHEVMKTLQVPKE 968
Query: 297 IIESIERIFPANAHLIVRSSANVEDLAGMSAAGLYESIPNVNPSNLRVFQNAVARVWASL 356
I SI + F +A LIVRSSANVEDLAGMSAAGLYESIPNV+PS+ VF ++V +VWASL
Sbjct: 969 TINSISKAFLKDARLIVRSSANVEDLAGMSAAGLYESIPNVSPSDPLVFSDSVCQVWASL 1028
Query: 357 YTRRAVLSRRAAGVSQKDATMAVLVQEMLSPDLSFVLHTLSPTDRDHNSVEAEIAPGLGE 416
YTRRAVLSRRAAGVSQ++A+MAVLVQEMLSPDLSFVLHT+SP D D N VEAEIAPGLGE
Sbjct: 1029 YTRRAVLSRRAAGVSQREASMAVLVQEMLSPDLSFVLHTVSPADPDSNLVEAEIAPGLGE 1088
Query: 417 TLASGTRGTPWRLSSGKFDGLVRTQAFANFSEEMLVSGAGPADGVVIRLTVDYSKKPLTV 476
TLASGTRGTPWRL+SGK DG+V+T AFANFSEE+LVSG GPADG +RLTVDYSKK LTV
Sbjct: 1089 TLASGTRGTPWRLASGKLDGIVQTLAFANFSEELLVSGTGPADGKYVRLTVDYSKKRLTV 1148
Query: 477 DPIFRRQLGQRLCSVGFFLERKFGCPQDVEGCLVGKDIYAVQTRPQP 523
D +FR+QLGQRL SVGFFLER FGC QDVEGCLVG+D+Y VQ+RPQP
Sbjct: 1149 DSVFRQQLGQRLGSVGFFLERNFGCAQDVEGCLVGEDVYIVQSRPQP 1195
>sp|Q2QTC2|PWD_ORYSJ Phosphoglucan, water dikinase, chloroplastic OS=Oryza sativa subsp.
japonica GN=GWD3 PE=3 SV=2
Length = 1206
Score = 632 bits (1631), Expect = e-180, Method: Compositional matrix adjust.
Identities = 329/521 (63%), Positives = 395/521 (75%), Gaps = 6/521 (1%)
Query: 8 IIFQVSKLCTLLLKAVRSTLGSQGWDVLVPGAAVGKLVQVDRISPGSLSSSGDEPVILAV 67
I+FQVSKLCT+L KA+R LGS GWDVLVPG A G L++V+RI PGSL SS EPV+L V
Sbjct: 687 IVFQVSKLCTVLQKAIREVLGSTGWDVLVPGVAHGTLMRVERILPGSLPSSVKEPVVLIV 746
Query: 68 SKADGDEEVAAAGSNILGVILLQELPHLSHLGVRARQEKVVFVTCEDDEKVSDIERLAGK 127
KADGDEEV AAG NI+GVILLQELPHLSHLGVRARQE VVFVTCE D+ V+D+ L GK
Sbjct: 747 DKADGDEEVKAAGDNIVGVILLQELPHLSHLGVRARQENVVFVTCEYDDTVTDVYLLEGK 806
Query: 128 YVRLEASSTCVNLNPYITHGNDGNFGLKTLS-GSSSSTVLVRGVHVSSFSASKAPMSSQG 186
Y+RLEASS VNL+ ++ ND + S G+ L + S MS Q
Sbjct: 807 YIRLEASSINVNLS-IVSEKNDNAVSTEPNSTGNPFQQKLQNEFSLPSDIEMPLQMSKQK 865
Query: 187 VSTGV----ILLADADADAMTSGAKAAACGRLASLSAVSEKVYSDQGVPASFLVPAGVVI 242
+GV L ++A ++GAKAAAC L+ L+++S KVYSDQGVPA+F VP+G VI
Sbjct: 866 SKSGVNGSFAALELSEASVESAGAKAAACRTLSVLASLSNKVYSDQGVPAAFRVPSGAVI 925
Query: 243 PFGSMQLALEQSKCMDTFVSFLEQIETAGPEGGELDNLCCQLQELISALQPSEDIIESIE 302
PFGSM+ AL++S +++F S LE+IETA E GE+D+L +LQ +IS L P E+ I ++
Sbjct: 926 PFGSMEDALKKSGSLESFTSLLEKIETAKVENGEVDSLALELQAIISHLSPPEETIIFLK 985
Query: 303 RIFPANAHLIVRSSANVEDLAGMSAAGLYESIPNVNPSNLRVFQNAVARVWASLYTRRAV 362
RIFP + LIVRSSANVEDLAGMSAAGLY+SIPNV+ + F AV +VWASLYTRRA+
Sbjct: 986 RIFPQDVRLIVRSSANVEDLAGMSAAGLYDSIPNVSLMDPCAFGAAVGKVWASLYTRRAI 1045
Query: 363 LSRRAAGVSQKDATMAVLVQEMLSPDLSFVLHTLSPTDRDHNSVEAEIAPGLGETLASGT 422
LSRRAAGV Q+DATMAVLVQE+L PDLSFVLHT+ P D D V+AE+APGLGETLASGT
Sbjct: 1046 LSRRAAGVYQRDATMAVLVQEILQPDLSFVLHTVCPADHDPKVVQAEVAPGLGETLASGT 1105
Query: 423 RGTPWRLSSGKFDGLVRTQAFANFSEEMLVSGAGPADGVVIRLTVDYSKKPLTVDPIFRR 482
RGTPWRLS KFDG V T AF+NFSEEM+V +GPA+G VIRLTVDYSKKPL+VD FR+
Sbjct: 1106 RGTPWRLSCNKFDGKVATLAFSNFSEEMVVHNSGPANGEVIRLTVDYSKKPLSVDTTFRK 1165
Query: 483 QLGQRLCSVGFFLERKFGCPQDVEGCLVGKDIYAVQTRPQP 523
Q GQRL ++G +LE+KFG QDVEGCLVGKDI+ VQ+RPQP
Sbjct: 1166 QFGQRLAAIGQYLEQKFGSAQDVEGCLVGKDIFIVQSRPQP 1206
>sp|Q8LPT9|GWD1_CITRE Alpha-glucan water dikinase, chloroplastic OS=Citrus reticulata GN=R1
PE=2 SV=1
Length = 1475
Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 142/539 (26%), Positives = 225/539 (41%), Gaps = 88/539 (16%)
Query: 12 VSKLCTLLLKAVRSTLGSQGWDVLVPGAAVGKLVQVDRISPGSLSSSGDEPVILAVSKAD 71
+S L L +R T W V+ P G + VD + S D+P IL +
Sbjct: 996 LSLLLNRLDPVLRKTASLGSWQVISPVEVFGYVAVVDELL-AVQDKSYDQPTILLARRVK 1054
Query: 72 GDEEVAAAGSNILGVILLQELPH-LSHLGVRARQEKVVFVTCEDDEKVSDIERLAGKYVR 130
G+EE+ +L ++P LSH+ VRAR KV F TC D ++D++ GK +
Sbjct: 1055 GEEEIPHGTV----AVLTADMPDVLSHVSVRARNCKVCFATCFDPNILADLQSNEGKMLH 1110
Query: 131 LEASSTCVNLNPYITHGND----GNFGLKTLSGSSSSTVLVRGVHVSSFSASKAPMSSQG 186
L+ +S + + + G++ + LK G SSS LV+ ++ + + +
Sbjct: 1111 LKPTSADIAYS--VVEGSELQDSSSANLKEEDGPSSSVALVKKQFAGRYAITSDEFTGEL 1168
Query: 187 VSTGVILLADADADAMTSGAKAAACGRLASLSAVSEKVYSDQGVPASFLVPAGVVIPFGS 246
V GAK+ L VP+ +P V +PFG
Sbjct: 1169 V-----------------GAKSRNIAYLKG------------KVPSWIGIPTSVALPFGV 1199
Query: 247 MQLALEQSKCMDTFVSFLEQIETAGPEGGELDNLCCQLQELISALQPSEDIIESIERIFP 306
+ L D + E+++ + GE D+ SAL+ +I E++ ++
Sbjct: 1200 FEKVLSD----DINQAVAEKLQILKQKLGEEDH---------SALR---EIRETVLQMKA 1243
Query: 307 ANAHLIVRSSANVEDLAGMSAAGLYESIPNVNPSNLRVFQNAVARVWASLYTRRAVLSRR 366
N +V+ +GM G + A+ +VWAS + RA S R
Sbjct: 1244 PNQ--LVQELKTEMKSSGMPWPG------DEGEQRWEQAWMAIKKVWASKWNERAFFSTR 1295
Query: 367 AAGVSQKDATMAVLVQEMLSPDLSFVLHTLSPTDRDHNSVEAEIAPGLGETLASGTRGTP 426
+ + MAVLVQE+++ D +FV+HT +P+ D + + AE+ GLGETL G
Sbjct: 1296 RVKLDHEYLCMAVLVQEIINADYAFVIHTTNPSSGDSSEIYAEVVKGLGETLVGAYPGRA 1355
Query: 427 WRLSSGKFD--------------GLV--RTQAF---ANFSEEMLVSGAGPADGVVI---- 463
K D GL R+ F +N + +GAG D V +
Sbjct: 1356 LSFVCKKNDLKSPRVLGYPSKPIGLFIRRSIIFRSDSNGEDLEGYAGAGLYDSVPMDEAE 1415
Query: 464 RLTVDYSKKPLTVDPIFRRQLGQRLCSVGFFLERKFGCPQDVEGCLVGKDIYAVQTRPQ 522
++ +DYS L D F++ + + G +E FG QD+EG + IY VQTRPQ
Sbjct: 1416 KVVLDYSSDHLITDGHFQQSILSSIARAGCEIEELFGSAQDIEGVVRDGKIYVVQTRPQ 1474
>sp|Q9STV0|GWD2_ARATH Alpha-glucan water dikinase 2 OS=Arabidopsis thaliana GN=GWD2 PE=2
SV=3
Length = 1278
Score = 132 bits (331), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 136/516 (26%), Positives = 222/516 (43%), Gaps = 88/516 (17%)
Query: 32 WDVLVPGAAVGKLVQVDRISPGSLSSSGDEPVILAVSKADGDEEVAAAGSNILGVILLQE 91
W V+ A G +V V+ + + +P ++ SK G+EE+ A ++ V+
Sbjct: 825 WQVISSADAYGFVVCVNELIVVQ-NKFYSKPTVIIASKVTGEEEIPAG---VVAVLTPSM 880
Query: 92 LPHLSHLGVRARQEKVVFVTCEDDEKVSDIERLAGKYVRLEASSTCVNLNPYITHGNDGN 151
+ LSH+ +RAR K+ F TC D +S+++ G+ + + ST + ++ DGN
Sbjct: 881 IDVLSHVSIRARNSKICFATCFDQNVLSNLKSKEGRAISIHTKSTGLVIS-------DGN 933
Query: 152 FGLKTLSGSSSSTVLVRGVHVSSFSASKAPMSSQGVSTGVILLADADADAMTSGAKAAAC 211
+S V VR + +SS V GVI +K
Sbjct: 934 ----------NSDVSVRHIFISS------------VPRGVISKGKKFCGHYVISSKEFTD 971
Query: 212 GRLASLSAVSEKVYSDQGVPASFLVPAGVVIPFGSMQ--LALEQSKCMDTFVSFLEQIET 269
R+ S S + + + VP+ +P +PFG+ + L+ + +K + +S L+
Sbjct: 972 ERVGSKSYNIK--FLRERVPSWIKIPTSAALPFGTFENILSDDSNKDVARRISVLKD--- 1026
Query: 270 AGPEGGELDNLCCQLQELISALQPSEDIIESIERIFPANAHLIVRSSANVEDLAGMSAAG 329
G+L L +QE I LQ S + E I L + D +G + +
Sbjct: 1027 -SLNRGDLTKLK-SIQEAI--LQMSAPMALRNELI----TKLRSERMPYLGDESGWNRSW 1078
Query: 330 LYESIPNVNPSNLRVFQNAVARVWASLYTRRAVLSRRAAGVSQKDATMAVLVQEMLSPDL 389
+ A+ +VWAS + RA +S + + MAVL+QE++ D
Sbjct: 1079 V-----------------AIKKVWASKWNERAYVSCKKNKLDHDAVCMAVLIQEVICGDY 1121
Query: 390 SFVLHTLSPTDRDHNSVEAEIAPGLGETLASGTRGTPWRLSSGKFD-------------- 435
+FV+HT +P D + + EI GLGETL G + K +
Sbjct: 1122 AFVIHTNNPVSGDSSEIYTEIVKGLGETLVGAYPGRAMSFITKKTNLKSPTVISYPSKRI 1181
Query: 436 GLVRTQAF-----ANFSEEMLVSGAGPADGVVI----RLTVDYSKKPLTVDPIFRRQLGQ 486
GL + +N + +GAG D V++ + VDYS++PL +D FR +L
Sbjct: 1182 GLYSKPSIIFRSDSNNEDLEGNAGAGLYDSVIMDEAEEVVVDYSREPLIMDKSFRVRLFS 1241
Query: 487 RLCSVGFFLERKFGCPQDVEGCLVGKDIYAVQTRPQ 522
+ G +E +GCPQD+EG + G IY VQ RPQ
Sbjct: 1242 AIAEAGNVIESIYGCPQDIEGVVKGGHIYIVQARPQ 1277
>sp|Q9AWA5|GWD1_SOLTU Alpha-glucan water dikinase, chloroplastic OS=Solanum tuberosum GN=R1
PE=1 SV=2
Length = 1464
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 142/543 (26%), Positives = 222/543 (40%), Gaps = 99/543 (18%)
Query: 12 VSKLCTLLLKAVRSTLGSQGWDVLVPGAAVGKLVQVDRISPGSLSSSGD---EPVILAVS 68
+S L L +R T W ++ P AVG +V VD + LS + +P IL
Sbjct: 988 LSSLLNRLDPVLRKTANLGSWQIISPVEAVGYVVVVDEL----LSVQNEIYEKPTILVAK 1043
Query: 69 KADGDEEVAAAGSNILGVILLQELPH-LSHLGVRARQEKVVFVTCEDDEKVSDIERLAGK 127
G+EE+ ++ ++P LSH+ VRAR KV F TC D ++D++ G+
Sbjct: 1044 SVKGEEEIPDGAV----ALITPDMPDVLSHVSVRARNGKVCFATCFDPNILADLQAKEGR 1099
Query: 128 YVRLEASSTCVNLNPYITHGNDGNFGLKTLSG-----SSSSTVLVRGVHVSSFSASKAPM 182
+ L+ + + I + L++ S +S++ LV+ ++ S
Sbjct: 1100 ILLLKPTPSD------IIYSEVNEIELQSSSNLVEAETSATLRLVKKQFGGCYAIS---- 1149
Query: 183 SSQGVSTGVILLADADADAMTSGAKAAACGRLASLSAVSEKVYSDQGVPASFLVPAGVVI 242
AD TS A +A L VP+S +P V +
Sbjct: 1150 ----------------ADEFTSEMVGAKSRNIAYLKG---------KVPSSVGIPTSVAL 1184
Query: 243 PFGSMQLALEQSKCMDTFVSFLEQIETAGPEGGELDNLCCQLQELISALQPSEDIIESIE 302
PFG + L S ++ V+ QI G+ L ++ P++ + E E
Sbjct: 1185 PFGVFEKVL--SDDINQGVAKELQILMKKLSEGDFSALGEIRTTVLDLSAPAQLVKELKE 1242
Query: 303 RIFPANAHLIVRSSANVEDLAGMSAAGLYESIPNVNPSNLRVFQNAVARVWASLYTRRAV 362
++ +GM G + P A+ +VWAS + RA
Sbjct: 1243 KM----------------QGSGMPWPG------DEGPKRWEQAWMAIKKVWASKWNERAY 1280
Query: 363 LSRRAAGVSQKDATMAVLVQEMLSPDLSFVLHTLSPTDRDHNSVEAEIAPGLGETLASGT 422
S R + MAVLVQE+++ D +FV+HT +P+ D + + AE+ GLGETL
Sbjct: 1281 FSTRKVKLDHDYLCMAVLVQEIINADYAFVIHTTNPSSGDDSEIYAEVVRGLGETLVGAY 1340
Query: 423 RGTPWRLSSGKFD--------------GLV--RTQAF---ANFSEEMLVSGAGPADGVVI 463
G K D GL R+ F +N + +GAG D V +
Sbjct: 1341 PGRALSFICKKKDLNSPQVLGYPSKPIGLFIKRSIIFRSDSNGEDLEGYAGAGLYDSVPM 1400
Query: 464 ----RLTVDYSKKPLTVDPIFRRQLGQRLCSVGFFLERKFGCPQDVEGCLVGKDIYAVQT 519
++ +DYS PL D FR+ + + G +E +G PQD+EG + IY VQT
Sbjct: 1401 DEEEKVVIDYSSDPLITDGNFRQTILSNIARAGHAIEELYGSPQDIEGVVRDGKIYVVQT 1460
Query: 520 RPQ 522
RPQ
Sbjct: 1461 RPQ 1463
>sp|Q9SAC6|GWD1_ARATH Alpha-glucan water dikinase 1, chloroplastic OS=Arabidopsis thaliana
GN=GWD1 PE=1 SV=2
Length = 1399
Score = 122 bits (306), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 135/540 (25%), Positives = 221/540 (40%), Gaps = 93/540 (17%)
Query: 12 VSKLCTLLLKAVRSTLGSQGWDVLVPGAAVGKLVQVDRISPGSLSSSGDEPVILAVSKAD 71
+S L L +R T W V+ P VG ++ VD + + + D P I+ ++
Sbjct: 923 LSSLVNRLDPVLRKTANLGSWQVISPVEVVGYVIVVDELLTVQ-NKTYDRPTIIVANRVR 981
Query: 72 GDEEVAAAGSNILGVILLQELPH-LSHLGVRARQEKVVFVTCEDDEKVSDIERLAGKYVR 130
G+EE+ +L ++P LSH+ VRAR K+ F TC D +SD++ GK +
Sbjct: 982 GEEEIPDGAV----AVLTPDMPDVLSHVSVRARNGKICFATCFDSGILSDLQGKDGKLLS 1037
Query: 131 LEASSTCVNLNPYITHGNDGNFGL---KTLSGSSSSTVLVRGVHVSSFSASKAPMSSQGV 187
L+ +S V ND L + S LV+ ++ S +S V
Sbjct: 1038 LQPTSADV----VYKEVNDSELSSPSSDNLEDAPPSISLVKKQFAGRYAISSEEFTSDLV 1093
Query: 188 STGVILLADADADAMTSGAKAAACGRLASLSAVSEKVYSDQGVPASFLVPAGVVIPFGSM 247
GAK+ G L VP+ +P V +PFG
Sbjct: 1094 -----------------GAKSRNIGYLKG------------KVPSWVGIPTSVALPFGVF 1124
Query: 248 QLALEQ--SKCMDTFVSFLEQIETAGPEGGELDNLCCQLQELISALQPSEDIIESIERIF 305
+ + + ++ ++ + L++ G +G L Q L+ + P E + E
Sbjct: 1125 EKVISEKANQAVNDKLLVLKKTLDEGDQGA----LKEIRQTLLGLVAPPELVEE------ 1174
Query: 306 PANAHLIVRSSANVEDLAGMSAAGLYESIPNVNPSNLRVFQNAVARVWASLYTRRAVLSR 365
++S+ D+ G A+ +VWAS + RA S
Sbjct: 1175 -------LKSTMKSSDMPWPGDEG---------EQRWEQAWAAIKKVWASKWNERAYFST 1218
Query: 366 RAAGVSQKDATMAVLVQEMLSPDLSFVLHTLSPTDRDHNSVEAEIAPGLGETLASGTRGT 425
R + MAVLVQE+++ D +FV+HT +P+ D + + AE+ GLGETL G
Sbjct: 1219 RKVKLDHDYLCMAVLVQEVINADYAFVIHTTNPSSGDSSEIYAEVVKGLGETLVGAYPGR 1278
Query: 426 PWRLSSGKFD--------------GLV--RTQAF---ANFSEEMLVSGAGPADGVVI--- 463
K + GL R+ F +N + +GAG D V +
Sbjct: 1279 SLSFICKKNNLDSPLVLGYPSKPIGLFIRRSIIFRSDSNGEDLEGYAGAGLYDSVPMDEE 1338
Query: 464 -RLTVDYSKKPLTVDPIFRRQLGQRLCSVGFFLERKFGCPQDVEGCLVGKDIYAVQTRPQ 522
++ +DY+ PL D F++++ + G +E+ +G QD+EG + +Y VQTRPQ
Sbjct: 1339 DQVVLDYTTDPLITDLSFQKKVLSDIARAGDAIEKLYGTAQDIEGVIRDGKLYVVQTRPQ 1398
>sp|O29548|PPSA_ARCFU Probable phosphoenolpyruvate synthase OS=Archaeoglobus fulgidus
(strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC
100126) GN=ppsA PE=3 SV=1
Length = 753
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 151/339 (44%), Gaps = 37/339 (10%)
Query: 191 VILLADADA-DAMTSGAKAAACGRLASLSAVSEKVYSDQGVPASFLVPAGVVIPFGSMQL 249
V+ LAD D D G K A G L + A VP G V+ + +
Sbjct: 3 VLWLADVDKNDIPLVGGKGANLGEL---------------LRAEIPVPDGFVVDARTFRE 47
Query: 250 ALEQSKCMDTFVSFLEQIETAGPEGGELDNLCCQLQELISALQPSEDIIESIERIFPA-- 307
++++ + S L +++ E +LD + +++E+I + EDI I +
Sbjct: 48 FIQKTGIAEKIYSLLRELDVEDTE--KLDAVSREIREIIEKTEMPEDIEREIREAYRKLC 105
Query: 308 -----NAHLIVRSSANVEDLAGMSAAGLYESIPNVNPSNLRVFQNAVARVWASLYTRRAV 362
++ VRSSA EDL S AG E+ NV + V V + W SL+T RA+
Sbjct: 106 EEEGKEVYVAVRSSATAEDLPDASFAGQQETYLNVVGEDEVV--EKVKKCWGSLFTPRAI 163
Query: 363 LSRRAAGVSQKDATMAVLVQEMLSPDLSFVLHTLSPTDRDHNSVEAEIAPGLGETLASGT 422
R G +D ++AV+VQ+M++ + S V+ T P + + E GLGE + SG
Sbjct: 164 YYRVQKGFRHEDVSIAVVVQKMVNSEKSGVMFTSHPVSGEKKCI-IEAVFGLGEAIVSGL 222
Query: 423 RGTPWRLSSGKFDGLVRTQAFANFSEEMLVSGAGPADGVVIRLTVDYSKKPLTVDPIFRR 482
TP + +D + R E+ + V + L + + + + D
Sbjct: 223 V-TP---DTYVYDRVKRKIEEVKIGEKKFMLTRKDGKTVKVELPPEKANERVLSD----- 273
Query: 483 QLGQRLCSVGFFLERKFGCPQDVEGCLVGKDIYAVQTRP 521
+ ++L ++G +E +G PQDVE + G IY VQ+RP
Sbjct: 274 EEIEKLVTLGELIEDHYGKPQDVEWAIEGGKIYIVQSRP 312
>sp|O34309|PPS_BACSU Putative phosphoenolpyruvate synthase OS=Bacillus subtilis (strain
168) GN=pps PE=3 SV=1
Length = 866
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 137/293 (46%), Gaps = 25/293 (8%)
Query: 236 VPAGVVIPFGSMQLALEQSKCMDTFVSFLEQIETAGPEGGELDNLCCQLQELISALQPSE 295
VP G + Q A+EQ++ + + L ++ + ++ N+ +++++I +
Sbjct: 37 VPEGFCVTTVGYQKAIEQNETLQVLLDQLTMLKVEDRD--QIGNISRKIRQIIMEVDIPS 94
Query: 296 DIIESIERI---FPANAHLIVRSSANVEDLAGMSAAGLYESIPNVNPSNLRVFQNAVARV 352
D+++++ + F VRSSA EDL S AG ++ N+ + + +++
Sbjct: 95 DVVKAVAQYLSQFGEEHAYAVRSSATAEDLPHASFAGQQDTYLNI--TGVDAILQHISKC 152
Query: 353 WASLYTRRAVLSRRAAGVSQKDATMAVLVQEMLSPDLSFVLHTLSPTDRDHNSVEAEIAP 412
WASL+T RAV+ R G ++V+VQ M+ P S +L T P + + +
Sbjct: 153 WASLFTDRAVIYRMQNGFDHSQVYLSVIVQRMVFPQASGILFTADPITSNRKVLSIDAGF 212
Query: 413 GLGETLASGTRGTPWRLSSGKF---DGLVRTQAFANFSEEMLVSGAGPADGVVIRLTVDY 469
GLGE L SG +S+ F DG + + A +++M + G ++ D
Sbjct: 213 GLGEALVSGL------VSADCFKVQDGQIIDKRIA--TKKMAIYGRKEGGTETQQIDSDQ 264
Query: 470 SK-KPLTVDPIFRRQLGQRLCSVGFFLERKFGCPQDVEGCLVGKDIYAVQTRP 521
K + LT + I +L +G +E FG PQD+E CL Y VQ+RP
Sbjct: 265 QKAQTLTDEQIL------QLARIGRQIEAHFGQPQDIEWCLARDTFYIVQSRP 311
>sp|O27190|PPSA_METTH Probable phosphoenolpyruvate synthase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=ppsA PE=3 SV=1
Length = 684
Score = 85.9 bits (211), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 148/337 (43%), Gaps = 51/337 (15%)
Query: 200 DAMTSGAKAAACGRLASLSAVSEKVYSDQGVPASFLVPAGVVIPFGSMQLALEQSKCMDT 259
D +G K A G L + G+P VP G V+ + + +
Sbjct: 43 DVGIAGGKGANLGEL-----------TQAGIP----VPPGFVVTAATYDKFMTDTGLQPV 87
Query: 260 FVSFLEQIETAGPEGGELDNLCCQLQELISALQPSEDI----IESI----ERIFPANAHL 311
+ LE ++ + EL + +++++I++ + EDI IES +RI + ++
Sbjct: 88 VMEMLENLDVN--DTKELQRVSAEIKDIITSTEVPEDIQTLIIESYNALCQRIGKDDVYV 145
Query: 312 IVRSSANVEDLAGMSAAGLYESIPNVNPSNLRVFQNAVARVWASLYTRRAVLSRRAAGVS 371
+RSSA EDL S AG ++ N+ + + + V R WASL+ RA+ R
Sbjct: 146 AIRSSATAEDLPEASFAGQQDTFLNIRGAEDVL--DYVRRCWASLFEARAIFYREENNFD 203
Query: 372 QKDATMAVLVQEMLSPDLSFVLHTLSP-TDRDHNSVEAEIAPGLGETLASG--TRGTPW- 427
+AV+VQEM+ + + V+ T+ P T D +E + GLGE + SG T T W
Sbjct: 204 HSKVYIAVVVQEMVDAEKAGVMFTVHPSTGEDRILIEG--SWGLGEAVVSGSVTPDTYWV 261
Query: 428 RLSSGKFDGLVRTQAFANFSEEMLVSGAGPADGVVIRLTVD---YSKKPLTVDPIFRRQL 484
+GK + F+ E DG ++ V +K+ L+ I
Sbjct: 262 DKGTGKLLEFTVGEKNIMFTRE---------DGRTVKKEVPPELRNKRVLSDGEI----- 307
Query: 485 GQRLCSVGFFLERKFGCPQDVEGCLVGKDIYAVQTRP 521
L +G ++ +G PQD E ++ D+Y +Q+RP
Sbjct: 308 -AALAEMGRRIQDHYGSPQDTEWAIMDGDVYMLQSRP 343
>sp|P46893|PPSA_STAMF Probable phosphoenolpyruvate synthase OS=Staphylothermus marinus
(strain ATCC 43588 / DSM 3639 / F1) GN=ppsA PE=1 SV=1
Length = 834
Score = 82.4 bits (202), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 137/327 (41%), Gaps = 51/327 (15%)
Query: 229 GVPASFLVPAGVVIPFGSMQLALEQSKCMDTFVSFLEQIETAGPEGGELDNLCCQLQELI 288
G+P VP G + + + +E++ D L I+ + LD ++++ I
Sbjct: 39 GIP----VPPGFAVTAYAYKYFIEKTGLKDKIYPLLNSIDVN--DKKVLDETTAKIRQWI 92
Query: 289 SALQPSEDIIESIERIF----------PANAHLIVRSSANVEDLAGMSAAGLYESIPNVN 338
++ E I + + P + VRSSA ED+ S AG ++ NV
Sbjct: 93 MDTPMPPEVEEEIRKYYRELAKKIGMEPEKLRVAVRSSATAEDMPEASFAGQQDTYLNVY 152
Query: 339 PSNLRVFQNAVARVWASLYTRRAVLSRRAAGVSQKDATMAVLVQEMLSPDLSFVLHTLSP 398
+ V+ V R WASL+T RAV R A G+ + + M+V VQ+M++ + V+ TL P
Sbjct: 153 GEDNVVYY--VKRCWASLFTSRAVFYRVAQGIPHEKSLMSVTVQKMVNSRTAGVMFTLHP 210
Query: 399 TDRDHNSVEAEIAPGLGETLASGTRGTP--WRLSSGKF---DGLVRTQAFA--------- 444
D V E + GLGE++ G + TP W + D + + A
Sbjct: 211 VTGDEKVVVIEASWGLGESVVGG-KVTPDEWVVDKQTLQIVDQKIHHKTLAIVFDPKKGK 269
Query: 445 ------NFSEEMLVSGAGPADGVVIRLTVDYSKKPLTVDPIFRRQLGQRLCSVGFFLERK 498
+ +++ VS GP D ++ K P + + +RL + +E+
Sbjct: 270 NVEIRWDENKQAWVSEEGPVD-------IEMVKHFHPDKPALKEEEVKRLAELALLIEKH 322
Query: 499 FGCPQDVEGCL-----VGKDIYAVQTR 520
+G D+E + +++ VQ R
Sbjct: 323 YGRHMDIEWAVDYDIPFPDNVFIVQAR 349
>sp|Q9V2H7|PPSA_PYRAB Probable phosphoenolpyruvate synthase OS=Pyrococcus abyssi (strain
GE5 / Orsay) GN=ppsA PE=3 SV=1
Length = 819
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 117/262 (44%), Gaps = 26/262 (9%)
Query: 276 ELDNLCCQLQELISALQPSEDIIESIERIFPA--------NAHLIVRSSANVEDLAGMSA 327
+L ++ELI +L +I + I++ + ++ VRSSA EDL S
Sbjct: 107 QLQENTAVIRELIKSLDMPAEIADEIKQAYKELSQRFGKDEIYVAVRSSATAEDLPEASF 166
Query: 328 AGLYESIPNVNPSNLRVFQNAVARVWASLYTRRAVLSRRAAGVSQKDATMAVLVQEMLSP 387
AG E+ +V ++ + + V R WASL+T RA R G ++ +VQ+M++
Sbjct: 167 AGQQETYLDVLGADDVI--DKVKRCWASLWTARATFYRAKQGFDHSKVYLSAVVQKMVNS 224
Query: 388 DLSFVLHTLSPTDRDHNSVEAEIAPGLGETLASGTRGTPWRLSSGKFDGLVRTQAFANFS 447
+ S V+ T +P + N + + GLGE + SG TP K ++ + A
Sbjct: 225 EKSGVMFTANPVTNNRNEIMINASWGLGEAVVSGAV-TPDEYIVEKGTWKIKEKVIAK-K 282
Query: 448 EEMLVSGAGPADGVVIRLTVDY------SKKPLTVDPIFRRQLGQRLCSVGFFLERKFGC 501
E M++ G V +Y K+ LT + I + +G +E +G
Sbjct: 283 EVMVIRNPETGKGTVTVKVAEYLGPEWVEKQVLTDEQII------EVAKMGQKIEEHYGW 336
Query: 502 PQDVEGCLVGKD--IYAVQTRP 521
PQD+E D +Y VQ+RP
Sbjct: 337 PQDIEWAYDKDDGKLYIVQSRP 358
>sp|P42850|PPSA_PYRFU Phosphoenolpyruvate synthase OS=Pyrococcus furiosus (strain ATCC
43587 / DSM 3638 / JCM 8422 / Vc1) GN=ppsA PE=1 SV=3
Length = 817
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 115/254 (45%), Gaps = 26/254 (10%)
Query: 284 LQELISALQPSEDIIESIERIFPA--------NAHLIVRSSANVEDLAGMSAAGLYESIP 335
++ LI +L +I E I++ + ++ VRSSA EDL S AG E+
Sbjct: 115 IRTLIKSLDMPSEIAEEIKQAYKELSQRFGQEEVYVAVRSSATAEDLPEASFAGQQETYL 174
Query: 336 NVNPSNLRVFQNAVARVWASLYTRRAVLSRRAAGVSQKDATMAVLVQEMLSPDLSFVLHT 395
+V ++ + + V R WASL+T RA R G ++ +VQ+M++ + S V+ T
Sbjct: 175 DVLGADDVI--DKVKRCWASLWTARATFYRAKQGFDHSKVYLSAVVQKMVNSEKSGVMFT 232
Query: 396 LSPTDRDHNSVEAEIAPGLGETLASGTRGTPWRLSSGKFDGLVRTQAFANFSEEMLVSGA 455
+P + N + + GLGE + SG TP K ++ + A E M++
Sbjct: 233 ANPVTNNRNEIMINASWGLGEAVVSGAV-TPDEYIVEKGTWKIKEKVIAK-KEVMVIRNP 290
Query: 456 GPADGVVIRLTVDY------SKKPLTVDPIFRRQLGQRLCSVGFFLERKFGCPQDVEGCL 509
G V+ +Y K+ LT + I + +G +E +G PQD+E
Sbjct: 291 ETGRGTVMVKVAEYLGPEWVEKQVLTDEQII------EVAKMGQKIEDHYGWPQDIEWAY 344
Query: 510 VGKD--IYAVQTRP 521
D +Y VQ+RP
Sbjct: 345 DKDDGKLYIVQSRP 358
>sp|O57830|PPSA_PYRHO Probable phosphoenolpyruvate synthase OS=Pyrococcus horikoshii
(strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139
/ OT-3) GN=ppsA PE=3 SV=1
Length = 821
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 116/254 (45%), Gaps = 26/254 (10%)
Query: 284 LQELISALQPSEDIIESIERIFPA--------NAHLIVRSSANVEDLAGMSAAGLYESIP 335
++ELI +L+ +I + I++ + ++ VRSSA EDL S AG E+
Sbjct: 118 IRELIESLEMPNEIADEIKQAYKELSQRFGKDEIYVAVRSSATAEDLPEASFAGQQETYL 177
Query: 336 NVNPSNLRVFQNAVARVWASLYTRRAVLSRRAAGVSQKDATMAVLVQEMLSPDLSFVLHT 395
+V ++ + + V + WASL+T RA R G ++ +VQ+M++ + S V+ T
Sbjct: 178 DVLGADDVI--DKVKKCWASLWTARATFYRAKQGFDHSKVYLSAVVQKMVNSEKSGVMFT 235
Query: 396 LSPTDRDHNSVEAEIAPGLGETLASGTRGTPWRLSSGKFDGLVRTQAFANFSEEMLVSGA 455
+P + N + + GLGE + SG TP K ++ + A E M++
Sbjct: 236 ANPVTNNRNEIMINASWGLGEAVVSGAV-TPDEYIVEKGTWKIKEKVIAK-KEVMVIRNP 293
Query: 456 GPADGVVIRLTVDY------SKKPLTVDPIFRRQLGQRLCSVGFFLERKFGCPQDVEGCL 509
G V +Y K+ LT + I + +G +E +G PQD+E
Sbjct: 294 ETGKGTVQVKVAEYLGPEWVEKQVLTDEQII------EVAKMGQKIEEHYGWPQDIEWAY 347
Query: 510 VGKD--IYAVQTRP 521
D +Y VQ+RP
Sbjct: 348 DKDDGKLYIVQSRP 361
>sp|Q57962|PPSA_METJA Probable phosphoenolpyruvate synthase OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=ppsA PE=3 SV=1
Length = 1188
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 151/349 (43%), Gaps = 37/349 (10%)
Query: 183 SSQGVSTGVILLAD--ADADAMTSGAKAAACGRLASLSAVSEKVYSDQGVPASFLVPAGV 240
+++G S I D ++ D +G K A+ G + + G+P VP
Sbjct: 6 NTKGDSMKFIAWLDELSNKDVDIAGGKGASLGEMW-----------NAGLP----VPPAF 50
Query: 241 VIPFGSMQLALEQSKCMDTFVSFLEQIETAGPEGGELDNLCCQLQELISALQPSED---- 296
V+ + + ++++ MD L ++ + L N ++++LI + ED
Sbjct: 51 VVTADAYRHFIKETGLMDKIREILSGLDVNDTDA--LTNASKKIRKLIEEAEMPEDLRLA 108
Query: 297 IIESIERIFPA----NAHLIVRSSANVEDLAGMSAAGLYESIPNVNPSNLRVFQNAVARV 352
IIE+ ++ + VRSSA EDL S AG ++ N+ + V V +
Sbjct: 109 IIEAYNKLCEMCGEDEVTVAVRSSATAEDLPEASFAGQQDTYLNIKGAENVV--KYVQKC 166
Query: 353 WASLYTRRAVLSRRAAGVSQKDATMAVLVQEMLSPDLSFVLHTLSPTDRDHNSVEAEIAP 412
++SL+T RA+ R G +A +VQ++++ + + V+ T++P +++ + E A
Sbjct: 167 FSSLFTPRAIFYREQQGFDHFKVALAAVVQKLVNAEKAGVMFTVNPISENYDELVIEAAW 226
Query: 413 GLGETLASGTRGTPWRLSSGKFDGLVRTQAFANFSEEMLVSGAGPADGVVIRLTVDYSKK 472
GLGE + SG+ + + K +V E M V + V+ + D +K
Sbjct: 227 GLGEGVVSGSVSPDTYIVNKKTLEIVDKHIAR--KETMFVKDE-KGETKVVEVPDDMKEK 283
Query: 473 PLTVDPIFRRQLGQRLCSVGFFLERKFGCPQDVEGCLVGKDIYAVQTRP 521
+ D + L +G +E+ +G P DVE Y +Q RP
Sbjct: 284 QVLSDDEIK-----ELAKIGLNIEKHYGKPMDVEWAYEKGKFYMLQARP 327
>sp|Q9YEC5|PPSA_AERPE Phosphoenolpyruvate synthase OS=Aeropyrum pernix (strain ATCC
700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
GN=ppsA PE=3 SV=2
Length = 820
Score = 65.9 bits (159), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 64/123 (52%), Gaps = 3/123 (2%)
Query: 313 VRSSANVEDLAGMSAAGLYESIPNVNPSNLRVFQNAVARVWASLYTRRAVLSRRAAGVSQ 372
VRSSA VEDL S AG E+ NV V V WASL+T RA+ R + +
Sbjct: 121 VRSSATVEDLPEASFAGQQETYLNVKGEEEVV--EKVKTAWASLWTARALSYRDSLNIDH 178
Query: 373 KDATMAVLVQEMLSPDLSFVLHTLSPTDRDHNSVEAEIAPGLGETLASGTRGTPWRLSSG 432
+ A MAV+VQ+M+S S V+ T+ P + + + E GLGE + G + TP R
Sbjct: 179 ETALMAVVVQKMVSSRSSGVMFTIHPVTGEEDKIVIESIWGLGEYIVGG-KVTPDRFVVS 237
Query: 433 KFD 435
K D
Sbjct: 238 KSD 240
>sp|O67899|PPSA_AQUAE Phosphoenolpyruvate synthase OS=Aquifex aeolicus (strain VF5)
GN=ppsA PE=3 SV=1
Length = 856
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 92/204 (45%), Gaps = 22/204 (10%)
Query: 235 LVPAGVVIPFGSMQLA------LEQSKCMDTFVSFLEQIETAGPEGGELDNLCCQLQELI 288
L P GV IP+G + A L+ + D LE + T + +L +++ELI
Sbjct: 38 LSPLGVKIPYGYVVTANAYYYFLDYNNLRDKIRKILEGLNTDDLK--DLQRRGHEVRELI 95
Query: 289 SALQPSEDIIESIERIF-----PANAHLI---VRSSANVEDLAGMSAAGLYESIPNV-NP 339
D+ E+I+ + H + VRSSA EDL S AG E+ NV
Sbjct: 96 RGGTFPPDLEEAIKDYYNKLSEKYKTHAVDVAVRSSATAEDLPDASFAGQQETYLNVVGA 155
Query: 340 SNLRVFQNAVARVWASLYTRRAVLSRRAAGVSQKDATMAVLVQEMLSPDL--SFVLHTLS 397
N+ V A+ +ASL+T RA++ R G +AV VQ+M+ D+ S V+ TL
Sbjct: 156 ENVLV---AIKNCFASLFTDRAIVYRERFGFDHFKVGIAVGVQKMVRSDMGASGVMFTLD 212
Query: 398 PTDRDHNSVEAEIAPGLGETLASG 421
+ V A GLGE L G
Sbjct: 213 TETGFKDVVVINAAYGLGELLVRG 236
>sp|Q9K0I2|PPSA_NEIMB Phosphoenolpyruvate synthase OS=Neisseria meningitidis serogroup B
(strain MC58) GN=ppsA PE=1 SV=1
Length = 794
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 97/230 (42%), Gaps = 25/230 (10%)
Query: 307 ANAHLIVRSSANVEDLAGMSAAGLYESIPNVNPSNLRVFQNAVARVWASLYTRRAVLSRR 366
A+ + VRSSA EDL S AG E+ N+N L + A+ V+ASLY RA+ R
Sbjct: 118 ADISVAVRSSATAEDLPDASFAGQQETFLNIN--GLDNVKEAMHHVFASLYNDRAISYRV 175
Query: 367 AAGVSQKDATMAVLVQEMLSPD--LSFVLHTLSPTDRDHNSVEAEIAPGLGETLASGTRG 424
G ++ VQ M+ D S V+ TL V + GLGE + G
Sbjct: 176 HKGFEHDIVALSAGVQRMVRSDSGASGVMFTLDTESGYDQVVFVTSSYGLGENVVQGAVN 235
Query: 425 -------TPWRLSSGKFDGLVRTQAFANFSEEMLVSGAGPADGVVIRLTV---DYSKKPL 474
P L +GK L +T + +M+ + A V + V D ++ +
Sbjct: 236 PDEFYVFKP-TLKAGKPAILRKTMGSKHI--KMIFTDKAEAGKSVTNVDVPEEDRNRFSI 292
Query: 475 TVDPIFRRQLGQRLCSVGFFLERKFGCPQDVEGCLVGKD--IYAVQTRPQ 522
T + I L +E+ +G P D+E G D +Y +Q RP+
Sbjct: 293 TDEEI------TELAHYALTIEKHYGRPMDIEWGRDGLDGKLYILQARPE 336
>sp|O83026|PPSA_DEIRA Phosphoenolpyruvate synthase OS=Deinococcus radiodurans (strain
ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC
15346 / NCIMB 9279 / R1 / VKM B-1422) GN=ppsA PE=3 SV=2
Length = 780
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 97/220 (44%), Gaps = 21/220 (9%)
Query: 313 VRSSANVEDLAGMSAAGLYESIPNVNPSNLRVFQNAVARVWASLYTRRAVLSRRAAGVSQ 372
VRSSA EDL S AG E+ NV + N V V+ASLY RA+ R
Sbjct: 117 VRSSATAEDLPEASFAGQQETFLNVR--GIEEVLNHVKLVFASLYNDRAISYRVHHNFEH 174
Query: 373 KDATMAVLVQEMLSPDL--SFVLHTLSPTDRDHNSVEAEIAPGLGETLASGTRGTPW--- 427
+ ++ VQ M+ DL S V TL ++V + GLGE + G
Sbjct: 175 SEVALSAGVQRMVRTDLGVSGVAFTLDTESGFRDAVFVTSSYGLGEMVVQGAVNPDEFFV 234
Query: 428 ---RLSSGKFDGLVRTQAFANFSEEMLVSGAGPADGVVIRLTVDYSKKPLTVDPIFRRQL 484
L GK L RT+ + ++M+ + AG GV + ++ ++ +L
Sbjct: 235 YKPALEQGKKAVLRRTRG--SKQKKMIYAEAG---GVKTVDVDEAEQRAFSLSDDDLTEL 289
Query: 485 GQRLCSVGFFLERKFGCPQDVEGCLVGKD--IYAVQTRPQ 522
++ ++ E+ +G P D+E G+D IY +Q RP+
Sbjct: 290 ARQCVTI----EKHYGRPMDIEWGKDGRDVQIYILQARPE 325
>sp|O34796|YVKC_BACSU Uncharacterized phosphotransferase YvkC OS=Bacillus subtilis
(strain 168) GN=yvkC PE=3 SV=1
Length = 831
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 89/204 (43%), Gaps = 16/204 (7%)
Query: 320 EDLAGMSAAGLYESIPNVNPSNLRVFQNAVARVWASLYTRRAVLSRRAAGVSQKDATMAV 379
EDL G S AG YE+ N+ F V WAS ++ R ++ + M +
Sbjct: 100 EDLEGASFAGQYETYLNIKTE--EEFLAKVKECWASFFSGRVSSYKKKMNNQIAEPLMGI 157
Query: 380 LVQEMLSPDLSFVLHTLSPTDRDHNSVEAEIAPGLGETLASGTRGTPWRLSSGKFDGLVR 439
+VQ ++ ++S V+ + +P D + + GLGE + SG TP K ++
Sbjct: 158 VVQGLIDSEMSGVIFSRNPVTHDDRELLISASYGLGEAVVSGNV-TPDTFIVNKSSFEIQ 216
Query: 440 TQAFANFSEEMLVSGAGPADGVVIRLTVD--YSKKPLTVDPIFRRQLGQRLCSVGFFLER 497
+ A +E+ + A A+G+ + T + S+ LT + + L + E
Sbjct: 217 KEIGA---KEIYMESA--AEGIAEKETSEDMRSRFCLTDEQVI------ELAEITKKTED 265
Query: 498 KFGCPQDVEGCLVGKDIYAVQTRP 521
+G P D+E + IY +Q RP
Sbjct: 266 LYGYPVDIEFGIADHQIYLLQARP 289
>sp|P56070|PPSA_HELPY Phosphoenolpyruvate synthase OS=Helicobacter pylori (strain ATCC
700392 / 26695) GN=ppsA PE=3 SV=1
Length = 812
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 105/271 (38%), Gaps = 57/271 (21%)
Query: 230 VPASFLVPAGVVIPFGSMQLALEQSKCMDTFVSFLEQIETAGPEGGELDNLCC---QLQE 286
VP VP G I + LEQ + LE ++ E+D L Q++E
Sbjct: 33 VPIGIKVPDGFAITSEAYWYLLEQGGAKQKIIELLENVDAT-----EIDVLKIRSKQIRE 87
Query: 287 LISALQPSEDIIESI--------ERIFPANAHLIVRSSANVEDLAGMSAAGLYESIPNVN 338
LI D+ + I ++ A + VRSSA EDL S AG ++ N+
Sbjct: 88 LIFGTPFPSDLRDEIFQAYEILSQQYHMKEADVAVRSSATAEDLPDASFAGQQDTYLNIK 147
Query: 339 PSNLRVFQNAVARVWASLYTRRAVLSRRAAGVSQKDATMAVLVQEMLSPDL--SFVLHTL 396
+ + + ASL+T RA+ R + G ++V VQ+M+ D + V+ ++
Sbjct: 148 GKTELI--HYIKSCLASLFTDRAISYRASRGFDHLKVALSVGVQKMVRADKGSAGVMFSI 205
Query: 397 SPTDRDHNSVEAEIAPGLGETLASGTRGTPWRLSSGKFDGLVRTQAFANFSEEMLVSGAG 456
++V A GLGE + GT
Sbjct: 206 DTETGFKDAVFITSAWGLGENVVGGT--------------------------------IN 233
Query: 457 PADGVVIRLTVDYSKKPLTVDPIFRRQLGQR 487
P + V + T++ +K+ PI +RQLG +
Sbjct: 234 PDEFYVFKPTLEQNKR-----PIIKRQLGNK 259
>sp|Q9ZMV4|PPSA_HELPJ Phosphoenolpyruvate synthase OS=Helicobacter pylori (strain J99)
GN=ppsA PE=3 SV=1
Length = 812
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 105/271 (38%), Gaps = 57/271 (21%)
Query: 230 VPASFLVPAGVVIPFGSMQLALEQSKCMDTFVSFLEQIETAGPEGGELDNLCC---QLQE 286
VP VP G I + LEQ + LE ++ E+D L Q++E
Sbjct: 33 VPIGIKVPDGFAITSEAYWYLLEQGGAKQKIIELLENVDAT-----EIDVLKIRSKQIRE 87
Query: 287 LISALQPSEDIIESI--------ERIFPANAHLIVRSSANVEDLAGMSAAGLYESIPNVN 338
LI D+ + I ++ A + VRSSA EDL S AG ++ N+
Sbjct: 88 LIFGTPFPSDLRDEIFQAYEILSQQYHMKEADVAVRSSATAEDLPDASFAGQQDTYLNIK 147
Query: 339 PSNLRVFQNAVARVWASLYTRRAVLSRRAAGVSQKDATMAVLVQEMLSPDL--SFVLHTL 396
+ + + ASL+T RA+ R + G ++V VQ+M+ D + V+ ++
Sbjct: 148 GKTELI--HYIKSCLASLFTDRAISYRASRGFDHLKVALSVGVQKMVRADKGSAGVMFSI 205
Query: 397 SPTDRDHNSVEAEIAPGLGETLASGTRGTPWRLSSGKFDGLVRTQAFANFSEEMLVSGAG 456
++V A GLGE + GT
Sbjct: 206 DTETGFKDAVFITSAWGLGENVVGGT--------------------------------IN 233
Query: 457 PADGVVIRLTVDYSKKPLTVDPIFRRQLGQR 487
P + V + T++ +K+ PI +RQLG +
Sbjct: 234 PDEFYVFKPTLEQNKR-----PIIKRQLGNK 259
>sp|Q55905|PPSA_SYNY3 Phosphoenolpyruvate synthase OS=Synechocystis sp. (strain PCC 6803
/ Kazusa) GN=ppsA PE=3 SV=1
Length = 818
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 4/111 (3%)
Query: 313 VRSSANVEDLAGMSAAGLYESIPNVNPSNLRVFQNAVARVWASLYTRRAVLSRRAAGVSQ 372
VRSSA EDL S AG E+ NV+ +L + + +ASL+T RA+ R G
Sbjct: 141 VRSSATAEDLPEASFAGQQETYLNVH--SLSCVLESCHKCFASLFTDRAISYRHHNGFDH 198
Query: 373 KDATMAVLVQEMLSPDL--SFVLHTLSPTDRDHNSVEAEIAPGLGETLASG 421
++V VQ+M+ DL S V+ ++ N+ A GLGE + G
Sbjct: 199 FAVALSVGVQKMVRSDLATSGVMFSIDTETGFKNAALITAAYGLGENVVQG 249
>sp|P23538|PPSA_ECOLI Phosphoenolpyruvate synthase OS=Escherichia coli (strain K12)
GN=ppsA PE=1 SV=5
Length = 792
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 93/231 (40%), Gaps = 29/231 (12%)
Query: 308 NAHLIVRSSANVEDLAGMSAAGLYESIPNVNPSNLRVFQNAVARVWASLYTRRAVLSRRA 367
NA VRSSA ED+ S AG E+ NV + + AV V+ASL+ RA+ R
Sbjct: 121 NASFAVRSSATAEDMPDASFAGQQETFLNVQGFDAVLV--AVKHVFASLFNDRAISYRVH 178
Query: 368 AGVSQKDATMAVLVQEMLSPDLS-----FVLHTLSPTDRDHNSVEAEIAPGLGETLASGT 422
G + ++ VQ M+ DL+ F + T S D+ V A GLGE + G
Sbjct: 179 QGYDHRGVALSAGVQRMVRSDLASSGVMFSIDTESGFDQ---VVFITSAWGLGEMVVQGA 235
Query: 423 RGTPWRLSSGKFDGLVRTQAFANFSEEMLVSGAGPADGVVIRLTVDYSKKPLTVDPIFRR 482
++ +F V A ++ G ++ K + ++ + +
Sbjct: 236 ------VNPDEF--YVHKPTLAANRPAIVRRTMGSKKIRMVYAPTQEHGKQVKIEDVPQE 287
Query: 483 QLG---------QRLCSVGFFLERKFGCPQDVEGCLVGK--DIYAVQTRPQ 522
Q Q L +E+ +G P D+E G ++ VQ RP+
Sbjct: 288 QRDIFSLTNEEVQELAKQAVQIEKHYGRPMDIEWAKDGHTGKLFIVQARPE 338
>sp|Q56YN8|SMC3_ARATH Structural maintenance of chromosomes protein 3 OS=Arabidopsis
thaliana GN=SMC3 PE=2 SV=1
Length = 1204
Score = 40.4 bits (93), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 254 SKCMDTFVSFLEQIETAGPEGGELDNLCCQLQELISALQPSEDIIESIERIFPANAH 310
K +D +V+F EQ E ELD +++ELI+ L +D ESIER F AH
Sbjct: 974 KKALDQYVNFTEQREELQNRQAELDAGDEKIKELITVLDQRKD--ESIERTFKGVAH 1028
>sp|A5DL92|YTM1_PICGU Ribosome biogenesis protein YTM1 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=YTM1 PE=3 SV=2
Length = 453
Score = 36.2 bits (82), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
Query: 388 DLSFVLHTLSP------TDRDHNSVEAEIAPGLGETLASGTRGTPWRLSSGKFDGLVRTQ 441
DL + L P T+ D S I PG G LAS + ++ SG +DG+VRT
Sbjct: 97 DLQYTRAVLPPSFLASFTNEDWISSIDTINPGHGAVLASNMKLQESKILSGSYDGVVRTY 156
Query: 442 AFANFSEEMLVSGAGPADGV 461
+ E + +GP V
Sbjct: 157 NMSGEVESQYIGHSGPVKSV 176
>sp|Q9PE42|TIG_XYLFA Trigger factor OS=Xylella fastidiosa (strain 9a5c) GN=tig PE=3 SV=1
Length = 431
Score = 36.2 bits (82), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 21/133 (15%)
Query: 27 LGSQGWDVLVPGAAVGKLVQVDRISPGSLSSSGDEPVILAVSKADGDEEVAAAGSNILGV 86
L + W V GA VG LV ++ + S +GDE + + E AGS ILG
Sbjct: 143 LQRRTWRVAEHGAQVGHLVALE-----TWSQAGDERLPI---------EGVEAGSTILGS 188
Query: 87 ILLQELPHLSHLGVRARQEKVVFVTCEDDEKVSDIERLAGKYVRLEASSTCVNLNPYITH 146
++ E G+ EKV+ VT DD +V+ +LAGK V++ V+ P +
Sbjct: 189 GVMFEQIERGLEGLSKGDEKVLDVTFPDDWRVT---QLAGKAVQVHVKVIEVS-EPVLLE 244
Query: 147 GND---GNFGLKT 156
N+ +FG+K+
Sbjct: 245 VNEEFIKSFGVKS 257
>sp|P04821|CDC25_YEAST Cell division control protein 25 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CDC25 PE=1 SV=1
Length = 1589
Score = 33.9 bits (76), Expect = 3.6, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 7/52 (13%)
Query: 276 ELDNLCCQLQELISALQPSEDIIESIERIFPANAHLI------VRSSANVED 321
+LD C +L + +++ S+DI +S E FP N HL+ +R +AN+ED
Sbjct: 313 DLDIYCSELPLISNSIMESDDICDS-EPKFPPNDHLVNLYTRDLRKNANIED 363
>sp|Q8BCV9|L_MILVL RNA-directed RNA polymerase L OS=Mirafiori lettuce virus (isolate
Lettuce/Netherlands/LS301-O) GN=L PE=3 SV=1
Length = 2280
Score = 32.7 bits (73), Expect = 7.9, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Query: 248 QLALEQSKCMDTFVSFLEQIETAGPEGGELDNLCCQL---QELISALQPSED-IIESIER 303
+L+ E+ K MD +VS L+Q G L C L Q+ +S+ P D +IESIE
Sbjct: 306 KLSTEEKKFMDYYVSLLDQPLKTRVGMGALYETTCLLMSDQKTLSSSMPILDNLIESIE- 364
Query: 304 IFPANAHLIVRSSANV--EDLAGMSAAGLYESIPNVNPS 340
+ +IV +V E MS+ G + + NPS
Sbjct: 365 VSTEQTEIIVEVCISVGPETCIKMSSLGKTLILASTNPS 403
>sp|Q87E52|TIG_XYLFT Trigger factor OS=Xylella fastidiosa (strain Temecula1 / ATCC
700964) GN=tig PE=3 SV=1
Length = 431
Score = 32.3 bits (72), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 61/133 (45%), Gaps = 21/133 (15%)
Query: 27 LGSQGWDVLVPGAAVGKLVQVDRISPGSLSSSGDEPVILAVSKADGDEEVAAAGSNILGV 86
L + W V GA VG LV ++ + S +GDE + + E AGS ILG
Sbjct: 143 LQRRTWRVAEHGAQVGYLVALE-----TWSQAGDERLPI---------EGVEAGSTILGS 188
Query: 87 ILLQELPHLSHLGVRARQEKVVFVTCEDDEKVSDIERLAGKYVRLEASSTCVNLNPYITH 146
++ E G+ E V+ VT DD +V +LAGK V++ V+ P +
Sbjct: 189 GVMFEQIERGLEGLSKGDENVLDVTFPDDWRVM---QLAGKAVQVHVKVIEVS-EPVLLE 244
Query: 147 GND---GNFGLKT 156
N+ +FG+K+
Sbjct: 245 VNEEFIKSFGVKS 257
>sp|B2I8K2|TIG_XYLF2 Trigger factor OS=Xylella fastidiosa (strain M23) GN=tig PE=3 SV=1
Length = 431
Score = 32.3 bits (72), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 61/133 (45%), Gaps = 21/133 (15%)
Query: 27 LGSQGWDVLVPGAAVGKLVQVDRISPGSLSSSGDEPVILAVSKADGDEEVAAAGSNILGV 86
L + W V GA VG LV ++ + S +GDE + + E AGS ILG
Sbjct: 143 LQRRTWRVAEHGAQVGYLVALE-----TWSQAGDERLPI---------EGVEAGSTILGS 188
Query: 87 ILLQELPHLSHLGVRARQEKVVFVTCEDDEKVSDIERLAGKYVRLEASSTCVNLNPYITH 146
++ E G+ E V+ VT DD +V +LAGK V++ V+ P +
Sbjct: 189 GVMFEQIERGLEGLSKGDENVLDVTFPDDWRVM---QLAGKAVQVHVKVIEVS-EPVLLE 244
Query: 147 GND---GNFGLKT 156
N+ +FG+K+
Sbjct: 245 VNEEFIKSFGVKS 257
>sp|B0U5N0|TIG_XYLFM Trigger factor OS=Xylella fastidiosa (strain M12) GN=tig PE=3 SV=1
Length = 431
Score = 32.3 bits (72), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 61/133 (45%), Gaps = 21/133 (15%)
Query: 27 LGSQGWDVLVPGAAVGKLVQVDRISPGSLSSSGDEPVILAVSKADGDEEVAAAGSNILGV 86
L + W V GA VG LV ++ + S +GDE + + E AGS ILG
Sbjct: 143 LQRRTWRVAEHGAQVGYLVALE-----TWSQAGDERLPI---------EGVEAGSTILGS 188
Query: 87 ILLQELPHLSHLGVRARQEKVVFVTCEDDEKVSDIERLAGKYVRLEASSTCVNLNPYITH 146
++ E G+ E V+ VT DD +V +LAGK V++ V+ P +
Sbjct: 189 GVMFEQIERGLEGLSKGDENVLDVTFPDDWRVM---QLAGKAVQVHVKVIEVS-EPVLLE 244
Query: 147 GND---GNFGLKT 156
N+ +FG+K+
Sbjct: 245 VNEEFIKSFGVKS 257
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 184,055,675
Number of Sequences: 539616
Number of extensions: 7596827
Number of successful extensions: 20911
Number of sequences better than 100.0: 47
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 20829
Number of HSP's gapped (non-prelim): 74
length of query: 524
length of database: 191,569,459
effective HSP length: 122
effective length of query: 402
effective length of database: 125,736,307
effective search space: 50545995414
effective search space used: 50545995414
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)