Query 009825
Match_columns 524
No_of_seqs 226 out of 1477
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 13:50:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009825.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009825hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ols_A Phosphoenolpyruvate syn 100.0 7E-60 2.4E-64 534.7 29.5 313 189-523 4-337 (794)
2 1vbg_A Pyruvate,orthophosphate 100.0 2.8E-48 9.6E-53 440.1 8.5 274 189-524 4-344 (876)
3 1kbl_A PPDK, pyruvate phosphat 100.0 1.5E-45 5.2E-50 417.6 8.2 272 189-524 2-340 (873)
4 2x0s_A Pyruvate phosphate diki 100.0 6.3E-42 2.2E-46 391.8 13.9 297 188-523 4-368 (913)
5 1h6z_A Pyruvate phosphate diki 100.0 7.8E-43 2.7E-47 394.3 0.2 295 188-524 4-369 (913)
6 3t05_A Pyruvate kinase, PK; te 96.9 0.0013 4.3E-08 72.0 6.9 99 33-140 501-599 (606)
7 2e28_A Pyruvate kinase, PK; al 96.2 0.00091 3.1E-08 73.1 0.5 99 33-140 482-580 (587)
8 2ols_A Phosphoenolpyruvate syn 95.9 0.0016 5.5E-08 73.9 0.9 94 33-135 364-460 (794)
9 1h6z_A Pyruvate phosphate diki 95.4 0.0063 2.1E-07 69.5 3.3 75 33-112 424-498 (913)
10 1kbl_A PPDK, pyruvate phosphat 94.5 0.0027 9.3E-08 72.4 -3.2 98 33-135 395-501 (873)
11 1zym_A Enzyme I; phosphotransf 94.3 0.013 4.5E-07 57.6 1.8 80 58-142 151-231 (258)
12 1vbg_A Pyruvate,orthophosphate 94.0 0.0063 2.2E-07 69.5 -1.4 101 34-140 400-509 (876)
13 2x0s_A Pyruvate phosphate diki 93.7 0.019 6.5E-07 66.0 1.7 74 33-112 424-498 (913)
14 2wqd_A Phosphoenolpyruvate-pro 92.5 0.067 2.3E-06 58.3 3.7 78 58-140 153-231 (572)
15 2hwg_A Phosphoenolpyruvate-pro 92.4 0.067 2.3E-06 58.4 3.5 78 58-140 151-229 (575)
No 1
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis}
Probab=100.00 E-value=7e-60 Score=534.72 Aligned_cols=313 Identities=25% Similarity=0.313 Sum_probs=265.3
Q ss_pred eEEEEccccc-CCccccChhhhchHHHHhhhccccccccCCCCCCccccCCeEEECHHHHHHHHHhcCChhHHHHHHHHh
Q 009825 189 TGVILLADAD-ADAMTSGAKAAACGRLASLSAVSEKVYSDQGVPASFLVPAGVVIPFGSMQLALEQSKCMDTFVSFLEQI 267 (524)
Q Consensus 189 ~~~~~l~~~~-~~~~~vG~KAanL~~L~~~~~~~~~~~~~~~~p~~~~VP~gfvIpf~~f~~~l~~~~~~~~i~~ll~~l 267 (524)
.+++||++.. .+...+|||++||++|.+.. .+ .|++||+||+||+++|++|++++++++.+.+.++.+
T Consensus 4 ~~v~~~~~~~~~~~~~vGGK~anL~em~~~L--~~---------~GlpVP~GF~Itt~a~~~fl~~~~l~~~i~~~l~~l 72 (794)
T 2ols_A 4 NYVIWFENLRMTDVERVGGKNASLGEMISQL--TE---------KGVRVPGGFATTAEAYRAFLAHNGLSERISAALAKL 72 (794)
T ss_dssp CCEEEGGGCCGGGHHHHHHHHHHHHHHHHHH--GG---------GTCCCCCEEEECHHHHHHHHTGGGHHHHHHHHHHSC
T ss_pred CEEEECCcCChhhcccCCHHHHHHHHHHHHH--hh---------CCCCCCCEEEECHHHHHHHHHhCChHHHHHHHHHhh
Confidence 5799998873 68899999999999997631 11 679999999999999999999999999998888877
Q ss_pred hhcCCCchhHHHHHHHHHHHHHhcCCCHHHHHHHHHhCC--------CCcceEEccCCCccCccCCcccccccccCcCCC
Q 009825 268 ETAGPEGGELDNLCCQLQELISALQPSEDIIESIERIFP--------ANAHLIVRSSANVEDLAGMSAAGLYESIPNVNP 339 (524)
Q Consensus 268 ~~~~~~~~~l~~~~~~ir~~I~~~~~p~~l~~~l~~~~~--------~~~~vaVRSSa~~ED~~~~S~AG~~~S~lnv~~ 339 (524)
+. .+...+.+.+.++|++|.+.++|+++.++|.+++. .+.+|+||||++.||++++||||+|+|++|+.
T Consensus 73 ~~--~~~~~l~~~~~~ir~~I~~~~~p~~l~~~i~~a~~~l~~~~g~~~~~vaVRSSa~~EDl~~~sfAG~~~t~l~v~- 149 (794)
T 2ols_A 73 DV--EDVAELARVGKEIRQWILDTPFPEQLDAEIEAAWNKMVADAGGADISVAVRSSATAEDLPDASFAGQQETFLNIN- 149 (794)
T ss_dssp CT--TSHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTSSCCCCEEEEEEECC-------CCSCSCEEEEEC-
T ss_pred cc--cCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccccccCceEEEecCCChhhhhhhhhhhhhhhhhcCC-
Confidence 64 35677889999999999999999999999876542 26789999999999999999999999999997
Q ss_pred CcHHHHHHHHHHHHHhcCChhHHHHHHHhCCCCcCCceeEEEEeecCCC--eEEEEEecCCCCCCCCeEEEEeccCCCcc
Q 009825 340 SNLRVFQNAVARVWASLYTRRAVLSRRAAGVSQKDATMAVLVQEMLSPD--LSFVLHTLSPTDRDHNSVEAEIAPGLGET 417 (524)
Q Consensus 340 ~~~~~l~~AIk~VWAS~~~~rA~~yR~~~Gi~~~~~~MAVLVQ~mV~a~--~SGVl~T~nP~~g~~~~i~ie~~~GLGe~ 417 (524)
+.+++++|||+||||+||+||+.||+++|++++++.|||+||+||+++ .|||+||+||.+|+++.++|+++|||||.
T Consensus 150 -g~~~l~~Aik~v~aS~~s~RAi~YR~~~gi~~~~~~mAV~VQ~MV~~~~s~sGV~FT~dP~tG~~~~~~I~a~~GlGE~ 228 (794)
T 2ols_A 150 -GLDNVKEAMHHVFASLYNDRAISYRVHKGFEHDIVALSAGVQRMVRSDSGASGVMFTLDTESGYDQVVFVTSSYGLGEN 228 (794)
T ss_dssp -SHHHHHHHHHHHHHHTTCHHHHHHHHHHCC--CCCCEEEEEEECCCTTSSEEEEEESSCTTTCCCSEEEEEEEESCTHH
T ss_pred -CHHHHHHHHHHHHHhcCCHHHHHHHHHcCCChHHhCceEEEEEcccCCceeEEEEEeCCCCCCCCceEEEEeccCCCce
Confidence 689999999999999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred ccccccCCceeEEecc-----cCCceeEEeecccceeEEeeccCCCCCc-EEEEeecC--CCCCCCCCHHHHHHHHHHHH
Q 009825 418 LASGTRGTPWRLSSGK-----FDGLVRTQAFANFSEEMLVSGAGPADGV-VIRLTVDY--SKKPLTVDPIFRRQLGQRLC 489 (524)
Q Consensus 418 lV~G~~g~p~~~~~~k-----~~~~v~~~~~~~~~~~l~~~~~~~~~g~-~~~~~v~~--~~~~l~~d~~~r~~~~~~La 489 (524)
+|+|.+ +|+.|.++| .++.+....+++|...+.... ...+|+ +..++++. ...++++|+. +.+|+
T Consensus 229 vV~G~~-tpd~~~v~kp~l~~~~~~i~~~~~~~k~~~~~~~~-~~~~g~~~~~~~~p~~~~~~~~L~d~~-----~~~L~ 301 (794)
T 2ols_A 229 VVQGAV-NPDEFYVFKPTLKAGKPAILRKTMGSKHIKMIFTD-KAEAGKSVTNVDVPEEDRNRFSITDEE-----ITELA 301 (794)
T ss_dssp HHHTSS-CCEEEEEEHHHHHTTSCCEEEEECCCCCEEEEECS-CCSSSTTEEEEECCHHHHTSCSSCHHH-----HHHHH
T ss_pred eecCCc-CCcEEEEeccccccCCcceeeeeccccceeEEecc-cccCCCeeEEEeCCHHHhcCCCCCHHH-----HHHHH
Confidence 999997 899999998 456777888888888887521 112344 66666653 3556676654 68999
Q ss_pred HHHHHHHHhhCCCEEEEEEEECC--eEEEEeeeccc
Q 009825 490 SVGFFLERKFGCPQDVEGCLVGK--DIYAVQTRPQP 523 (524)
Q Consensus 490 ~~a~~lE~~fg~pqDIEw~i~~~--~l~IlQ~RP~~ 523 (524)
+++..||++||.||||||+++++ +|||||+||++
T Consensus 302 ~~~~~lE~~yg~pqDIEwai~~~~g~L~iLQaRP~t 337 (794)
T 2ols_A 302 HYALTIEKHYGRPMDIEWGRDGLDGKLYILQARPET 337 (794)
T ss_dssp HHHHHHHHHHTSCEEEEEEECTTTCCEEEEEEEECC
T ss_pred HHHHHHHHHcCCCeEEEEEEECCCCeEEEEEecCcc
Confidence 99999999999999999999987 79999999986
No 2
>1vbg_A Pyruvate,orthophosphate dikinase; transferase, maize, riken structural genomics/proteomics INI RSGI, structural genomics; 2.30A {Zea mays} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1vbh_A*
Probab=100.00 E-value=2.8e-48 Score=440.08 Aligned_cols=274 Identities=20% Similarity=0.173 Sum_probs=221.7
Q ss_pred eEEEEc----ccc-cCCccccChhhhchHHHHhhhccccccccCCCCCCccccCCeEEECHHHHHHHHHhc-----CChh
Q 009825 189 TGVILL----ADA-DADAMTSGAKAAACGRLASLSAVSEKVYSDQGVPASFLVPAGVVIPFGSMQLALEQS-----KCMD 258 (524)
Q Consensus 189 ~~~~~l----~~~-~~~~~~vG~KAanL~~L~~~~~~~~~~~~~~~~p~~~~VP~gfvIpf~~f~~~l~~~-----~~~~ 258 (524)
.++++| ++. ..+...+|||++||++|.+ .|++||+||+||+++|++|++++ ++++
T Consensus 4 ~~v~~f~~~~~~~~~~~~~~vGGKganL~em~~---------------~glpVP~GF~Itt~a~~~~~~~~~~~~~~l~~ 68 (876)
T 1vbg_A 4 KRVFHFGKGKSEGNKTMKELLGGKGANLAEMAS---------------IGLSVPPGFTVSTEACQQYQDAGCALPAGLWA 68 (876)
T ss_dssp CSEEEEETTEESSCTTCTTTTHHHHHHHHHHHH---------------TTCCCCCEEEECHHHHHHHHHTTSCCCTTHHH
T ss_pred cEEEECCccccccCccccccCcHHHHHHHHHHH---------------CCCCCCCeEEECHHHHHHHHHhcccccHHHHH
Confidence 468999 665 3688999999999999987 68999999999999999999998 7888
Q ss_pred HHHHHHHHhhhcC----CCch---hHHHHH------HHHHHHHHhcCCCHHHHHHHHHh----------------C----
Q 009825 259 TFVSFLEQIETAG----PEGG---ELDNLC------CQLQELISALQPSEDIIESIERI----------------F---- 305 (524)
Q Consensus 259 ~i~~ll~~l~~~~----~~~~---~l~~~~------~~ir~~I~~~~~p~~l~~~l~~~----------------~---- 305 (524)
.+.+.++.++... .+.. .+...+ ..++++|+++.+|+++.++|.++ |
T Consensus 69 ~i~~~l~~le~~~~~~~gd~~~plllsvrs~a~~smpgm~~tIln~~lpd~~~~~l~~~~~~~fA~d~yrr~~q~~~~~~ 148 (876)
T 1vbg_A 69 EIVDGLQWVEEYMGATLGDPQRPLLLSVRSGAAVSMPGMMDTVLNLGLNDEVAAGLAAKSGERFAYDSFRRFLDMFGNVV 148 (876)
T ss_dssp HHHHHHHHHHHHHTCBTTCSSSBCCEEEECCCSSCCTTCCCCEEEETCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhccccCCCcccccceecccccccchhHHHHHHcCCCCHHHHHHHHHhhccchHHHHHHHHHhhcccee
Confidence 8888888776410 1111 011011 23467777788888887777652 1
Q ss_pred ---------------CCCcceEEccCCCccCccC--CcccccccccCcC--CCCcHHHHHHHHHHHHHhcCChhHHHHHH
Q 009825 306 ---------------PANAHLIVRSSANVEDLAG--MSAAGLYESIPNV--NPSNLRVFQNAVARVWASLYTRRAVLSRR 366 (524)
Q Consensus 306 ---------------~~~~~vaVRSSa~~ED~~~--~S~AG~~~S~lnv--~~~~~~~l~~AIk~VWAS~~~~rA~~yR~ 366 (524)
.....+++|||++.||+++ .||+|+|+++.|+ +.+..++++.|||+||||+||+||+.||+
T Consensus 149 ~~vr~~~f~~~~~~~~~~~~v~~~ss~taEDl~~~~~sf~~~y~~~~g~~fp~d~~~qL~~Ai~~v~aS~~~~RAi~YR~ 228 (876)
T 1vbg_A 149 MDIPRSLFEEKLEHMKESKGLKNDTDLTASDLKELVGQYKEVYLSAKGEPFPSDPKKQLELAVLAVFNSWESPRAKKYRS 228 (876)
T ss_dssp SCCCHHHHHHHHHHHHHHHTCSSGGGCCHHHHHHHHHHHHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred eecChhhHHHHHHHHHHhcCccccccCCHHHHHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHhccCCHHHHHHHH
Confidence 1123578899999999999 9999999999888 33456899999999999999999999999
Q ss_pred HhCCCCcCCceeEEEEeecCCC-----eEEEEEecCCCCCCCCeEEEEeccCCCccccccccCCceeEEecccCCceeEE
Q 009825 367 AAGVSQKDATMAVLVQEMLSPD-----LSFVLHTLSPTDRDHNSVEAEIAPGLGETLASGTRGTPWRLSSGKFDGLVRTQ 441 (524)
Q Consensus 367 ~~Gi~~~~~~MAVLVQ~mV~a~-----~SGVl~T~nP~~g~~~~i~ie~~~GLGe~lV~G~~g~p~~~~~~k~~~~v~~~ 441 (524)
++|++++ ..|||+||+||.++ .|||+||+||.||+++.+-.-++.|+||.+|+|.+ +|+.|.+-+
T Consensus 229 ~~gi~~~-~~~AV~VQ~MV~g~~g~~s~sGV~FT~nP~tG~~~~~g~~li~a~GE~VVsG~~-tPd~~~~l~-------- 298 (876)
T 1vbg_A 229 INQITGL-RGTAVNVQCMVFGNMGNTSGTGVLFTRNPNTGEKKLYGEFLVNAQGEDVVAGIR-TPEDLDAMK-------- 298 (876)
T ss_dssp TTTCCCC-CCCCEEEEECCCSCSSTTCEEEEEESSCTTTCCSSCEEEEEESSCHHHHHHTSC-CCEETHHHH--------
T ss_pred hcCCCch-hCceEEEEEeccCCCCCCeeEEEEEeCCCCCCCcccceEEEEecCchhhhcCCc-Ccchhhhhc--------
Confidence 9999987 79999999999886 89999999999998764334467889999999997 787654300
Q ss_pred eecccceeEEeeccCCCCCcEEEEeecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCEEEEEEEECCeEEEEeeec
Q 009825 442 AFANFSEEMLVSGAGPADGVVIRLTVDYSKKPLTVDPIFRRQLGQRLCSVGFFLERKFGCPQDVEGCLVGKDIYAVQTRP 521 (524)
Q Consensus 442 ~~~~~~~~l~~~~~~~~~g~~~~~~v~~~~~~l~~d~~~r~~~~~~La~~a~~lE~~fg~pqDIEw~i~~~~l~IlQ~RP 521 (524)
....+.+.+|++++..||++||.||||||++++++|||||+||
T Consensus 299 -------------------------------------~~~p~~~~~L~~~~~~lE~hy~~pqDIEfti~~g~L~iLQ~Rp 341 (876)
T 1vbg_A 299 -------------------------------------NLMPQAYDELVENCNILESHYKEMQDIEFTVQENRLWMLQCRT 341 (876)
T ss_dssp -------------------------------------HHCHHHHHHHHHHHHHHHHHHCSCEEEEEEEETTEEEEEEEEE
T ss_pred -------------------------------------ccCHHHHHHHHHHHHHHHHHcCCCeEEEEEEECCEEEEEEecc
Confidence 0012347899999999999999999999999999999999999
Q ss_pred ccC
Q 009825 522 QPH 524 (524)
Q Consensus 522 ~~~ 524 (524)
+++
T Consensus 342 ~kr 344 (876)
T 1vbg_A 342 GKR 344 (876)
T ss_dssp CCC
T ss_pred ccc
Confidence 854
No 3
>1kbl_A PPDK, pyruvate phosphate dikinase; transferase, phosphotransferase; 1.94A {Clostridium symbiosum} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1kc7_A* 1dik_A 1ggo_A 1jde_A 2dik_A 2r82_A 2fm4_A
Probab=100.00 E-value=1.5e-45 Score=417.59 Aligned_cols=272 Identities=17% Similarity=0.178 Sum_probs=210.1
Q ss_pred eEEEEccccc-CCccccChhhhchHHHHhhhccccccccCCCCCCccccCCeEEECHHHHHHHHHhc-----CChhHHHH
Q 009825 189 TGVILLADAD-ADAMTSGAKAAACGRLASLSAVSEKVYSDQGVPASFLVPAGVVIPFGSMQLALEQS-----KCMDTFVS 262 (524)
Q Consensus 189 ~~~~~l~~~~-~~~~~vG~KAanL~~L~~~~~~~~~~~~~~~~p~~~~VP~gfvIpf~~f~~~l~~~-----~~~~~i~~ 262 (524)
.++++|++.. .+...+|||++||++|.+ .|++||+||+||+++|++|++++ ++++.+.+
T Consensus 2 ~~v~~f~~~~~~~~~~vGGKganL~em~~---------------~glpVP~GF~ITt~a~~~~~~~~~~~p~~l~~~i~~ 66 (873)
T 1kbl_A 2 KWVYKFEEGNASMRNLLGGKGCNLAEMTI---------------LGMPIPQGFTVTTEACTEYYNSGKQITQEIQDQIFE 66 (873)
T ss_dssp CCEEEGGGCCGGGHHHHHHHHHHHHHHHH---------------TTCCCCCEEEECHHHHHHHHTTSSCCCHHHHHHHHH
T ss_pred CeEEECcCCChhhhhhCcHHHHHHHHHHh---------------CCCCCCCEEEEcHHHHHHHHHhcccccHHHHHHHHH
Confidence 3689998863 578899999999999987 68999999999999999999988 47788888
Q ss_pred HHHHhhhc-------CCCchhHHHHH------HHHHHHHHhcCCCHHHHHHHHHh-------------------------
Q 009825 263 FLEQIETA-------GPEGGELDNLC------CQLQELISALQPSEDIIESIERI------------------------- 304 (524)
Q Consensus 263 ll~~l~~~-------~~~~~~l~~~~------~~ir~~I~~~~~p~~l~~~l~~~------------------------- 304 (524)
.++.++.. ..++..+...+ .-+++.|+++.+|+++.+.|.+.
T Consensus 67 ~l~~le~~~~~~fg~~~~pl~lsvRS~a~~SmpGm~dtiLn~~l~d~~~~~l~~~~g~~~fa~d~yrr~~~~~~~v~~~v 146 (873)
T 1kbl_A 67 AITWLEELNGKKFGDTEDPLLVSVRSGARASMPGMMDTILNLGLNDVAVEGFAKKTGNPRFAYDSYRRFIQMYSDVVMEV 146 (873)
T ss_dssp HHHHHHHHHTSCBTCSSSCBCEEEEEECSSCCTTSSCEEEEETCCTTHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHhccccCCCCCchhHHHhhccccccccHHHHHHcCCCCHHHHHHHHHhhCCchHHHHHHHHHHhccCCceeec
Confidence 88777631 01110111001 11245566666666666666541
Q ss_pred -----------CCCCcceEEccCCCccCccCCcccccccc-cCcC-C-----CCcHHHHHHHHHHHHHhcCChhHHHHHH
Q 009825 305 -----------FPANAHLIVRSSANVEDLAGMSAAGLYES-IPNV-N-----PSNLRVFQNAVARVWASLYTRRAVLSRR 366 (524)
Q Consensus 305 -----------~~~~~~vaVRSSa~~ED~~~~S~AG~~~S-~lnv-~-----~~~~~~l~~AIk~VWAS~~~~rA~~yR~ 366 (524)
+.....+.+|||++.||+.+ ++|.|.. |+++ . .+..++++.|||+||||+||+||+.||+
T Consensus 147 ~~~~f~~~~~~~~~~~~v~~ds~~taedl~~--~~~~~~~~~~~~~~g~~fp~dp~eqL~~Aik~V~aS~~~~RAi~YR~ 224 (873)
T 1kbl_A 147 PKSHFEKIIDAMKEEKGVHFDTDLTADDLKE--LAEKFKAVYKEAMNGEEFPQEPKDQLMGAVKAVFRSWDNPRAIVYRR 224 (873)
T ss_dssp CHHHHHHHHHHHHHHTCCCSGGGCCHHHHHH--HHHHHHHHHHTTTTTCCCCCCHHHHHHHHHHHHHHHTTSHHHHHHHH
T ss_pred cchhHHHHHHHHHHhcCcCccCCCCHHHHHH--HHHHHHHHHHHhhcCCCCCccHHHHHHHHHHHHHhccCCHHHHHHHH
Confidence 11234679999999999974 5666653 4444 2 2236899999999999999999999999
Q ss_pred HhCCCCcCCceeEEEEeecCCC-----eEEEEEecCCCCCCCCeEEEEeccCCCccccccccCCceeEEecccCCceeEE
Q 009825 367 AAGVSQKDATMAVLVQEMLSPD-----LSFVLHTLSPTDRDHNSVEAEIAPGLGETLASGTRGTPWRLSSGKFDGLVRTQ 441 (524)
Q Consensus 367 ~~Gi~~~~~~MAVLVQ~mV~a~-----~SGVl~T~nP~~g~~~~i~ie~~~GLGe~lV~G~~g~p~~~~~~k~~~~v~~~ 441 (524)
.+|++++ ..|||+||+||.++ .|||+||+||.||+++.+-.-++.|+||.+|+|.+ +|+.|.+-.
T Consensus 225 ~~gi~~~-~~~AV~VQ~MV~g~~~~~s~sGV~FT~nP~tG~~~~~g~~li~a~GE~VV~G~~-tPd~~~~l~-------- 294 (873)
T 1kbl_A 225 MNDIPGD-WGTAVNVQTMVFGNKGETSGTGVAFTRNPSTGEKGIYGEYLINAQGEDVVAGVR-TPQPITQLE-------- 294 (873)
T ss_dssp HTTCCGG-GCCEEEEEECCCTTSSTTCEEEEEEEECTTTCCEEEEEEEEESCCHHHHHHTSS-CCEEGGGHH--------
T ss_pred HcCCCch-hCceEEEEEcccCCCCCceeEEEEEecCCCCCCcccceEEEecCCchhhhcCCc-Cchhhhhhc--------
Confidence 9999987 79999999999886 89999999999998653334457899999999997 787653300
Q ss_pred eecccceeEEeeccCCCCCcEEEEeecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCEEEEEEEECCeEEEEeeec
Q 009825 442 AFANFSEEMLVSGAGPADGVVIRLTVDYSKKPLTVDPIFRRQLGQRLCSVGFFLERKFGCPQDVEGCLVGKDIYAVQTRP 521 (524)
Q Consensus 442 ~~~~~~~~l~~~~~~~~~g~~~~~~v~~~~~~l~~d~~~r~~~~~~La~~a~~lE~~fg~pqDIEw~i~~~~l~IlQ~RP 521 (524)
....+.+++|++++..||++||.||||||++++++|||||+||
T Consensus 295 -------------------------------------~~~p~~~~~L~~~~~~lE~hy~~pqDIEfti~~g~L~iLQtRp 337 (873)
T 1kbl_A 295 -------------------------------------NDMPDCYKQFMDLAMKLEKHFRDMQDMEFTIEEGKLYFLQTRN 337 (873)
T ss_dssp -------------------------------------HHCHHHHHHHHHHHHHHHHHHTSCEEEEEEEETTEEEEEEEEE
T ss_pred -------------------------------------ccCHHHHHHHHHHHHHHHHHcCCCeEEEEEEECCEEEEEEecc
Confidence 0012347899999999999999999999999999999999999
Q ss_pred ccC
Q 009825 522 QPH 524 (524)
Q Consensus 522 ~~~ 524 (524)
..+
T Consensus 338 ~kr 340 (873)
T 1kbl_A 338 GKR 340 (873)
T ss_dssp CCC
T ss_pred ccc
Confidence 853
No 4
>2x0s_A Pyruvate phosphate dikinase; transferase, tropical parasite; 3.00A {Trypanosoma brucei}
Probab=100.00 E-value=6.3e-42 Score=391.77 Aligned_cols=297 Identities=16% Similarity=0.167 Sum_probs=210.4
Q ss_pred ceEEEEccc----c-cCCccccChhhhchHHHHhhhccccccccCCCCCCccccCCeEEECHHHHHHHHHhcCChhHHHH
Q 009825 188 STGVILLAD----A-DADAMTSGAKAAACGRLASLSAVSEKVYSDQGVPASFLVPAGVVIPFGSMQLALEQSKCMDTFVS 262 (524)
Q Consensus 188 ~~~~~~l~~----~-~~~~~~vG~KAanL~~L~~~~~~~~~~~~~~~~p~~~~VP~gfvIpf~~f~~~l~~~~~~~~i~~ 262 (524)
..|||++++ . ..+.++||||++|||+|.+ .|+|||+||+||+.+|++|++++++.+.+..
T Consensus 4 ~k~vy~F~~~~~e~~~~~~~LvGGKgAnLgEM~~---------------~GlpVP~GF~iTt~Ay~~fl~~~~l~~~i~~ 68 (913)
T 2x0s_A 4 KKWVYYFGGGNADGNKNMKELLGGKGANLAEMVN---------------LGIPVPPGFTITTEACKTYQETETIPQEVAD 68 (913)
T ss_dssp CCCEEEECSSSCSSCTTCHHHHHHHHHHHHHHHH---------------TTCCCCCEEEECHHHHHHHHTSSCCCHHHHH
T ss_pred CcEEEECCCCCccCCcchhhhCcHHHHHHHHHHH---------------CcCCCCCCEeehHHHHHHHHHcCCCcHHHHH
Confidence 358999954 2 2578899999999999987 6899999999999999999999988766654
Q ss_pred HH----HHhhhc--C--CCc-----------------hhHHHH------HHHHHHHHHhcCCCHHHHHH----HHHhCC-
Q 009825 263 FL----EQIETA--G--PEG-----------------GELDNL------CCQLQELISALQPSEDIIES----IERIFP- 306 (524)
Q Consensus 263 ll----~~l~~~--~--~~~-----------------~~l~~~------~~~ir~~I~~~~~p~~l~~~----l~~~~~- 306 (524)
.+ ..++.. + .+. +-++.+ -..++.++...+-++.+..+ +.+.|.
T Consensus 69 ~l~~~l~~le~~~~~~~gd~~~pLl~sVRsga~~smpgmmdtilnlgln~~~v~~l~~~~~~~~~~a~d~Yrr~~~~y~~ 148 (913)
T 2x0s_A 69 QVRENVSRVEKEMGAKFGDPANPLLFSVRSGAAASMPGMMDTVLNLGLNKVTVDAWVRRAPRLERFVYDSYRRFITMYAD 148 (913)
T ss_dssp HHHHHHHHHHHHHSCBTTCTTSBCCEEEEEECSCCC----CEEEEETCCHHHHTTTSTTCTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhhCCccccchheecccccccCCccchhHHhccccHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHH
Confidence 33 233210 0 000 000000 01233333322222222111 111110
Q ss_pred ------C-------CcceEEccCCCccCccCCcccccccccCcCCC---------CcHHHHHHHHHHHHHhcCChhHHHH
Q 009825 307 ------A-------NAHLIVRSSANVEDLAGMSAAGLYESIPNVNP---------SNLRVFQNAVARVWASLYTRRAVLS 364 (524)
Q Consensus 307 ------~-------~~~vaVRSSa~~ED~~~~S~AG~~~S~lnv~~---------~~~~~l~~AIk~VWAS~~~~rA~~y 364 (524)
. .....+|||++.||+...||||+.+||+|+.. +..++|+.|||+||||+||+||+.|
T Consensus 149 ~v~~v~~~~fe~~~~~~~~~rssa~~~dl~~as~a~~~~tyl~v~~~~~g~~fp~d~~~qL~~ai~~vfaSl~t~RAi~Y 228 (913)
T 2x0s_A 149 IVMQVGREDFEEALSRMKERRGTKFDTDLTASDLKELCDGYLELFELKTGCSFPQDPVMQLFAAIKAVFRSWGNPRATIY 228 (913)
T ss_dssp HHHCCCSHHHHHHHHHHHHHHTCSCGGGCCHHHHHHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHHHHHHHCHHHHTH
T ss_pred HhcCCChhhHHHHHHHHHHhcCccccccCCHHHHHHHHHHHHHHHHHHhCCCCCcCHHHHHHHHHHHHHHHccCHHHHHH
Confidence 0 11235799999999999999999999999831 2357999999999999999999999
Q ss_pred HHHhCCCCcCCceeEEEEeecCCC-----eEEEEEecCCCCCCCCeEEEEeccCCCccccccccCCceeEEecccCCcee
Q 009825 365 RRAAGVSQKDATMAVLVQEMLSPD-----LSFVLHTLSPTDRDHNSVEAEIAPGLGETLASGTRGTPWRLSSGKFDGLVR 439 (524)
Q Consensus 365 R~~~Gi~~~~~~MAVLVQ~mV~a~-----~SGVl~T~nP~~g~~~~i~ie~~~GLGe~lV~G~~g~p~~~~~~k~~~~v~ 439 (524)
|+.+|+++. +.+||.||.||.++ .||||||+||.||+++.+.+.+++||||.+|+|.+ +|+.|...+....+.
T Consensus 229 R~~~g~~~~-~~laV~VQ~MV~~~~~~~s~SGVmFT~dp~TG~~~~~~~~~~~glGE~VV~G~v-tPd~~~~~~~~~~~~ 306 (913)
T 2x0s_A 229 RRMNNITGL-LGTAVNVQAMVFGNINDRSATGVAFSRSPSTGENFFFGEYLVNAQGEDVVAGIR-TPQQINHSLSLRWAK 306 (913)
T ss_dssp HHHSCCCCC-CCCEEEEEECCCSCSSTTCEEEEEESSCTTTCCSSCEEEEEESCCTTHHHHCSS-CCBCSSHHHHHHHHH
T ss_pred HHhcCCCcc-cccceEEEEeeecccCccccceEEEecCCCCCCCcEEEEEccCCcCcccccCCC-CCcccccchhhhhhh
Confidence 999999985 99999999999876 68999999999999989999999999999999997 898875433211110
Q ss_pred EEeecccceeEEeeccCCCCCcEEEEeecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCEEEEEEEECCeEEEEee
Q 009825 440 TQAFANFSEEMLVSGAGPADGVVIRLTVDYSKKPLTVDPIFRRQLGQRLCSVGFFLERKFGCPQDVEGCLVGKDIYAVQT 519 (524)
Q Consensus 440 ~~~~~~~~~~l~~~~~~~~~g~~~~~~v~~~~~~l~~d~~~r~~~~~~La~~a~~lE~~fg~pqDIEw~i~~~~l~IlQ~ 519 (524)
....+.+...+ .|. +.++...+..+.|.+++..||+||+.||||||++++++||+||+
T Consensus 307 ~~~~~~k~~~~-----------------~~~-----~~~~~~p~~~~~l~~~~~~lE~hy~~~qdiE~a~~~g~l~ilq~ 364 (913)
T 2x0s_A 307 AHGVGEEERRK-----------------RYP-----SMEEAMPENYRLLCDVRKRLENHYRDMQDLEFTVQDGRLWLLQC 364 (913)
T ss_dssp TTTCCHHHHHH-----------------HSC-----CHHHHSHHHHHHHHHHHHHHHHHHSSCEEEEEEEETTEEEEEEE
T ss_pred hcccccccccc-----------------ccc-----chhhhhHHHHHHHHHHHHHHHHhcCcHHHhHHHhcCCchHHHHh
Confidence 00111111110 011 01111234567899999999999999999999999999999999
Q ss_pred eccc
Q 009825 520 RPQP 523 (524)
Q Consensus 520 RP~~ 523 (524)
||.+
T Consensus 365 R~~~ 368 (913)
T 2x0s_A 365 RNGK 368 (913)
T ss_dssp EECC
T ss_pred hhcc
Confidence 9865
No 5
>1h6z_A Pyruvate phosphate dikinase; transferase, tropical parasite, trypanosome; 3.00A {Trypanosoma brucei} PDB: 2x0s_A
Probab=100.00 E-value=7.8e-43 Score=394.33 Aligned_cols=295 Identities=17% Similarity=0.136 Sum_probs=211.4
Q ss_pred ceEEEEccc----c-cCCccccChhhhchHHHHhhhccccccccCCCCCCccccCCeEEECHHHHHHHHHhc----CChh
Q 009825 188 STGVILLAD----A-DADAMTSGAKAAACGRLASLSAVSEKVYSDQGVPASFLVPAGVVIPFGSMQLALEQS----KCMD 258 (524)
Q Consensus 188 ~~~~~~l~~----~-~~~~~~vG~KAanL~~L~~~~~~~~~~~~~~~~p~~~~VP~gfvIpf~~f~~~l~~~----~~~~ 258 (524)
..++|+|++ . ..+.+++|||++||++|.+ .|+|||+||+||+++|++|++++ ++++
T Consensus 4 ~k~v~~f~~~~~~~~~~~~~llGgKganL~em~~---------------lglpVPpGF~Itteac~~~~~~~~~~~~l~~ 68 (913)
T 1h6z_A 4 KKWVYYFGGGNADGNKNMKELLGGKGANLAEMVN---------------LGIPVPPGFTITTEACKTYQETETIPQEVAD 68 (913)
T ss_dssp CCCEEEECSSSCSCCTTCHHHHHHHHHHHHHHHH---------------TTCCCCCEEEECHHHHTTTTTSSCCCHHHHH
T ss_pred CCEEEECCCCcccCChhhHhhcChHhhhHHHHHH---------------CCCCCCCcEEeeHHHHHHHHHcCCCcHHHHH
Confidence 357999988 2 3678999999999999987 68999999999999999999876 4566
Q ss_pred HHHHHHHHhhhcC----CC---chhHHHH------HHHHHHHHHhcCCCHHHHHH-HHHh-----------------CC-
Q 009825 259 TFVSFLEQIETAG----PE---GGELDNL------CCQLQELISALQPSEDIIES-IERI-----------------FP- 306 (524)
Q Consensus 259 ~i~~ll~~l~~~~----~~---~~~l~~~------~~~ir~~I~~~~~p~~l~~~-l~~~-----------------~~- 306 (524)
.+.+.++.++... .+ +--+.-. .--+.+.|+++.++++.++. |.+. |.
T Consensus 69 ~i~~~l~~le~~~g~~fg~~~~PLLvsvrsga~~smpGmmdtilnlGlnd~~~~~~la~~~g~~~fa~d~Yrrfiq~~~~ 148 (913)
T 1h6z_A 69 QVRENVSRVEKEMGAKFGDPANPLLFSVRSGAAASMPGMMDTVLNLGLNKVTVDAWVRRAPRLERFVYDSYRRFITMYAD 148 (913)
T ss_dssp HHHHHHHHHHHHHCCBTTCTTSBCCEEEEESCTTC-----CCCCSBSCCHHHHHHHGGGCGGGHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcccCCCCCccceeeecccccccchHHHHHHhcCCCHHHHHHHHHHhcCChhHHHHHHHHHHHHhch
Confidence 6777777666421 01 1000000 12377888888999988888 5321 10
Q ss_pred ------------------CCcceEEccCCCccCccCCcccccccccC----c--CCCCcHHHHHHHHHHHHHhcCChhHH
Q 009825 307 ------------------ANAHLIVRSSANVEDLAGMSAAGLYESIP----N--VNPSNLRVFQNAVARVWASLYTRRAV 362 (524)
Q Consensus 307 ------------------~~~~vaVRSSa~~ED~~~~S~AG~~~S~l----n--v~~~~~~~l~~AIk~VWAS~~~~rA~ 362 (524)
....+...++.+.||+... ...|..+. + .+.+..++|+.|||+||||+||+||+
T Consensus 149 vv~~v~~~~fe~~~~~~k~~~g~~~d~~~~a~dl~~~--~~~yk~~~~~~~g~~fp~dp~eqL~~AI~~v~aS~~s~RAi 226 (913)
T 1h6z_A 149 IVMQVGREDFEEALSRMKERRGTKFDTDLTASDLKEL--CDGYLELFELKTGCSFPQDPVMQLFAAIKAVFRSWGNPRAT 226 (913)
T ss_dssp HHHCCCSTTTSTTTHHHHHHHSCSCGGGCCHHHHHHH--HHTTHHHHHHHSSSCCCCCHHHHHHHHHHHHHHTTTCTTTT
T ss_pred hhcCCCHHHHHHHHHHHHHHcCCCcccCCCHHHHHHH--HHHHHHHHHHHhCCCCCcCHHHHHHHHHHHHHHhcCcHHHH
Confidence 0123455689999998754 44555443 1 23334789999999999999999999
Q ss_pred HHHHHhCCCCcCCceeEEEEeecCCC-----eEEEEEecCCCCCCCCeEEEEe-ccCCCccccccccCCceeEEecccCC
Q 009825 363 LSRRAAGVSQKDATMAVLVQEMLSPD-----LSFVLHTLSPTDRDHNSVEAEI-APGLGETLASGTRGTPWRLSSGKFDG 436 (524)
Q Consensus 363 ~yR~~~Gi~~~~~~MAVLVQ~mV~a~-----~SGVl~T~nP~~g~~~~i~ie~-~~GLGe~lV~G~~g~p~~~~~~k~~~ 436 (524)
.||+.+|+++ +..|||+||+||.++ .|||+||+||.||+++ ++.|+ ..||||.+|+|.+ +|+.|.+++...
T Consensus 227 ~YR~~~gi~~-~~~mAV~VQ~MV~g~~~~~s~SGV~FT~dP~TG~~~-~~ge~li~alGE~VVsG~v-tPd~~~v~~~~~ 303 (913)
T 1h6z_A 227 IYRRMNNITG-LLGTAVNVQAMVFGNINDRSATGVAFSRSPSTGENF-FFGEYLVNAQGEDVVAGIR-TPQQINHSLSLR 303 (913)
T ss_dssp THHHHSCCCS-CCCCCEEEEECCCSCSSTTCEEEEEESSCSSSCCSS-CEEEEEESCCTTHHHHCCS-CCEESSHHHHHH
T ss_pred HHHHHcCCCh-hhcceEEEEEEeccCCCCcceeEEEEeCCCCCCCcc-eeeEEEEecCCchhccCCc-cCeEEEEecccc
Confidence 9999999998 489999999999875 6999999999999854 44443 4569999999997 899998764311
Q ss_pred ceeEEeecccceeEEeeccCCCCCcEEEEeecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCEEEEEEEECCeEEE
Q 009825 437 LVRTQAFANFSEEMLVSGAGPADGVVIRLTVDYSKKPLTVDPIFRRQLGQRLCSVGFFLERKFGCPQDVEGCLVGKDIYA 516 (524)
Q Consensus 437 ~v~~~~~~~~~~~l~~~~~~~~~g~~~~~~v~~~~~~l~~d~~~r~~~~~~La~~a~~lE~~fg~pqDIEw~i~~~~l~I 516 (524)
+....+..+... .... ..-+.+..+.+.+|++++..||++||.||||||++++++|||
T Consensus 304 -~~~~~i~~~~~~-----------------~~~~----~~l~~l~p~~~~eLa~~a~~lE~hyg~pqDIEwai~~G~LyI 361 (913)
T 1h6z_A 304 -WAKAHGVGEEER-----------------RKRY----PSMEEAMPENYRLLCDVRKRLENHYRDMQDLEFTVQDGRLWL 361 (913)
T ss_dssp -HHTTSSCCHHHH-----------------HHHS----CCHHHHSHHHHHHHHHHHHHHHHHHTSCEEEEEEEETTEEEE
T ss_pred -hhhcccchhhhc-----------------ccCc----hhhhhcCHHHHHHHHHHHHHHHHHhCCCceEEEEEECCEEEE
Confidence 000000000000 0000 001223356789999999999999999999999999999999
Q ss_pred EeeecccC
Q 009825 517 VQTRPQPH 524 (524)
Q Consensus 517 lQ~RP~~~ 524 (524)
||+||.++
T Consensus 362 LQaRP~~r 369 (913)
T 1h6z_A 362 LQCRNGKR 369 (913)
T ss_dssp EEEEECCC
T ss_pred EEecCccc
Confidence 99999864
No 6
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=96.85 E-value=0.0013 Score=72.01 Aligned_cols=99 Identities=14% Similarity=0.109 Sum_probs=73.4
Q ss_pred eEeeceeeeEEEEEecccCCCCCCCCCCCCeEEEEeCCCCcccccccCCCeEEEEecCCCCCccceeeeccCCceeEEEe
Q 009825 33 DVLVPGAAVGKLVQVDRISPGSLSSSGDEPVILAVSKADGDEEVAAAGSNILGVILLQELPHLSHLGVRARQEKVVFVTC 112 (524)
Q Consensus 33 ~~i~~g~a~G~l~~v~~l~~~~~~~~~~~p~Il~~~~~~g~eeip~~~~~V~gvi~~~~~~~LSHv~vrAR~~~v~~a~~ 112 (524)
+.+++|.+.|+++++....+. + ...+++.||+++..+.+ +++.- ..+.||| +..+...||.++.||++|||-+.-
T Consensus 501 ~~i~~G~v~G~v~vv~~~~da-~-~~~~~g~ILVa~~l~Ps-~~~~l-~~v~GiV-te~Gg~tSHaAIlAR~lgIPaVvG 575 (606)
T 3t05_A 501 QGIGRGSVVGTTLVAETVKDL-E-GKDLSDKVIVTNSIDET-FVPYV-EKALGLI-TEENGITSPSAIVGLEKGIPTVVG 575 (606)
T ss_dssp EEESSCEEEEEEEECSSGGGG-S-SSCCSSEEEEESCCCTT-THHHH-TTSSEEE-ESSCCSSSHHHHHHHHTTCCEEEC
T ss_pred cccccceEEEEEEEECChHHH-h-hcCCCCeEEEECCCCHH-HHHHH-HhhEEEE-ecCCCcccHHHHHHhhCCCCEEEe
Confidence 457888999999999875431 1 35678899999998887 56654 7899998 566778999999999999998765
Q ss_pred cCchhHHHHHhhcCCeEEEEEcCCceEe
Q 009825 113 EDDEKVSDIERLAGKYVRLEASSTCVNL 140 (524)
Q Consensus 113 ~d~~~~~~l~~~~g~~V~l~~~~~~~~~ 140 (524)
-.. .. ..-.+|++|.+... .|..+
T Consensus 576 ~~~-a~--~~l~~G~~V~vDg~-~G~V~ 599 (606)
T 3t05_A 576 VEK-AV--KNISNNVLVTIDAA-QGKIF 599 (606)
T ss_dssp CTT-HH--HHSCSSCEEEEETT-TTEEE
T ss_pred ccc-HH--hhCCCCCEEEEECC-CCEEE
Confidence 432 22 12346999888665 35444
No 7
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=96.20 E-value=0.00091 Score=73.14 Aligned_cols=99 Identities=15% Similarity=0.087 Sum_probs=71.5
Q ss_pred eEeeceeeeEEEEEecccCCCCCCCCCCCCeEEEEeCCCCcccccccCCCeEEEEecCCCCCccceeeeccCCceeEEEe
Q 009825 33 DVLVPGAAVGKLVQVDRISPGSLSSSGDEPVILAVSKADGDEEVAAAGSNILGVILLQELPHLSHLGVRARQEKVVFVTC 112 (524)
Q Consensus 33 ~~i~~g~a~G~l~~v~~l~~~~~~~~~~~p~Il~~~~~~g~eeip~~~~~V~gvi~~~~~~~LSHv~vrAR~~~v~~a~~ 112 (524)
..++||.+.|+++++...... + ...+++.||+++..+-+ ++|.- ..+.|||| ..+...||.++.||++|||-+.-
T Consensus 482 ~~~~~g~~~G~v~v~~~~~~~-~-~~~~~g~ILVa~~l~Ps-~~~~l-~~~~Givt-~~Gg~tSHaAIlAR~lgIPaVvG 556 (587)
T 2e28_A 482 QGIGRKSAFGKAVVAKTAEEA-R-QKMVDGGILVTVSTDAD-MMPAI-EKAAAIIT-EEGGLTSHAAVVGLSLGIPVIVG 556 (587)
T ss_dssp EEESSCEECCBEEECSSHHHH-H-HHCCTTCEEEESCCCGG-GHHHH-TTCSEEEE-SSCCTTSHHHHHHHHHTCCEEEC
T ss_pred ccccCCeEEeeEEEeCCHHHH-h-hcCCCCeEEEECCCCHH-HHHHH-HhcEEEEE-cCCCCcCHHHHHHHHcCCCEEEe
Confidence 557888999999999763310 1 24567899999998888 56654 79999985 56778999999999999998754
Q ss_pred cCchhHHHHHhhcCCeEEEEEcCCceEe
Q 009825 113 EDDEKVSDIERLAGKYVRLEASSTCVNL 140 (524)
Q Consensus 113 ~d~~~~~~l~~~~g~~V~l~~~~~~~~~ 140 (524)
-. +.... -.+|+.|.+.... |..+
T Consensus 557 ~~-~~~~~--l~~G~~v~vDg~~-G~V~ 580 (587)
T 2e28_A 557 VE-NATTL--FKDGQEITVDGGF-GAVY 580 (587)
T ss_dssp CT-THHHH--SCTTCBEEEETTT-TEEE
T ss_pred cc-cHHHh--CCCCCEEEEECCC-CEEE
Confidence 32 22222 2459998886653 4433
No 8
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis}
Probab=95.94 E-value=0.0016 Score=73.95 Aligned_cols=94 Identities=15% Similarity=0.121 Sum_probs=55.8
Q ss_pred eEeeceeeeEEEEEecccCCCCCCCCCCCCeEEEEeCCCCcccccccCCCeEEEEecCCCCCccceeeeccCCceeEEEe
Q 009825 33 DVLVPGAAVGKLVQVDRISPGSLSSSGDEPVILAVSKADGDEEVAAAGSNILGVILLQELPHLSHLGVRARQEKVVFVTC 112 (524)
Q Consensus 33 ~~i~~g~a~G~l~~v~~l~~~~~~~~~~~p~Il~~~~~~g~eeip~~~~~V~gvi~~~~~~~LSHv~vrAR~~~v~~a~~ 112 (524)
..++||.+.|++++|....+ . ....++.||+++..+-+ ++|.- ..+.|||| ..+...||.+|.||++|||-+.-
T Consensus 364 ~~~~~g~~~G~v~~~~~~~~--~-~~~~~g~ILv~~~~~p~-~~~~~-~~~~givt-~~Gg~tSHaAivar~~giP~vvg 437 (794)
T 2ols_A 364 RAIGQKVGQGKVRLIKDASE--M-DSVEAGDVLVTDMTDPD-WEPVM-KRASAIVT-NRGGRTCHAAIIARELGIPAVVG 437 (794)
T ss_dssp BC--CCCCCBCBC-----------------CEEEESCCCGG-GSHHH-HTCSEEEE-SSCCTTCHHHHHTTC---CEEEC
T ss_pred cccCCCcceEEEEEecCHHH--H-HhcCCCeEEEECCCCHH-HHHHH-hhCcEEEE-cCCCcccHHHHHHhHCCCCEEEc
Confidence 45689999999988876443 2 24466789999988886 67754 68999984 56788999999999999998754
Q ss_pred cCchhHHHHHhhcCCeEEE---EEcC
Q 009825 113 EDDEKVSDIERLAGKYVRL---EASS 135 (524)
Q Consensus 113 ~d~~~~~~l~~~~g~~V~l---~~~~ 135 (524)
-.. .... -.+|++|.+ ..+.
T Consensus 438 ~~~-~~~~--~~~G~~v~v~c~Dg~~ 460 (794)
T 2ols_A 438 CGN-ATEL--LKNGQEVTVSCAEGDT 460 (794)
T ss_dssp CTT-HHHH--SCSSCCEECCCC--CC
T ss_pred Ccc-hhhc--ccCCCEEEEEecCCCc
Confidence 332 2222 245999988 5553
No 9
>1h6z_A Pyruvate phosphate dikinase; transferase, tropical parasite, trypanosome; 3.00A {Trypanosoma brucei} PDB: 2x0s_A
Probab=95.45 E-value=0.0063 Score=69.53 Aligned_cols=75 Identities=25% Similarity=0.254 Sum_probs=54.8
Q ss_pred eEeeceeeeEEEEEecccCCCCCCCCCCCCeEEEEeCCCCcccccccCCCeEEEEecCCCCCccceeeeccCCceeEEEe
Q 009825 33 DVLVPGAAVGKLVQVDRISPGSLSSSGDEPVILAVSKADGDEEVAAAGSNILGVILLQELPHLSHLGVRARQEKVVFVTC 112 (524)
Q Consensus 33 ~~i~~g~a~G~l~~v~~l~~~~~~~~~~~p~Il~~~~~~g~eeip~~~~~V~gvi~~~~~~~LSHv~vrAR~~~v~~a~~ 112 (524)
...+||.|+|++++..+ +...+ ....+|.||++...+-+ +++.- ..+.||| +..+...||.+|.||++|||-++-
T Consensus 424 ~~aspG~a~G~v~~~~~-~a~~~-~~~ge~~ILV~~~t~P~-d~~~m-~~a~GIv-T~~GG~TSHaAIvAR~lGiPaVvG 498 (913)
T 1h6z_A 424 LAASPGAAVGQVVFDAE-SAKEW-SGRGKKVIMVRLETSPE-DLAGM-DAACGIL-TARGGMTSHAAVVARGMGKCCVSG 498 (913)
T ss_dssp EEEESCEEEEEEESSHH-HHHST-TTTSCCEEEEESSCCGG-GCTTT-TTSSEEE-ESSCCTTCHHHHHHHHTTCCEEEC
T ss_pred eecCCceEEEEEEECHH-HHHHH-HhcCCCEEEEECCCCHH-HHHhH-HhceEEE-EcCCCcccHHHHHHHhcCCCEEEC
Confidence 56899999999764221 10011 23567789999888776 67764 5789998 556677899999999999998763
No 10
>1kbl_A PPDK, pyruvate phosphate dikinase; transferase, phosphotransferase; 1.94A {Clostridium symbiosum} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1kc7_A* 1dik_A 1ggo_A 1jde_A 2dik_A 2r82_A 2fm4_A
Probab=94.46 E-value=0.0027 Score=72.45 Aligned_cols=98 Identities=22% Similarity=0.250 Sum_probs=63.8
Q ss_pred eEeeceeeeEEEEEecccCCCCCCCCCCCCeEEEEeCCCCcccccccCCCeEEEEecCCCCCccceeeeccCCceeEEEe
Q 009825 33 DVLVPGAAVGKLVQVDRISPGSLSSSGDEPVILAVSKADGDEEVAAAGSNILGVILLQELPHLSHLGVRARQEKVVFVTC 112 (524)
Q Consensus 33 ~~i~~g~a~G~l~~v~~l~~~~~~~~~~~p~Il~~~~~~g~eeip~~~~~V~gvi~~~~~~~LSHv~vrAR~~~v~~a~~ 112 (524)
..++||.++|++++ +. ++........+|.||+++..+-+ +++.- ..+.||| +..+-..||.+|.||++|||-++-
T Consensus 395 ~~as~G~a~G~vv~-~~-~~a~~~~~~g~~~ILV~~~t~P~-~~~~~-~~a~Giv-T~~GG~tSHaAIvAR~lGiP~VvG 469 (873)
T 1kbl_A 395 LPASPGAAAGKVYF-TA-DEAKAAHEKGERVILVRLETSPE-DIEGM-HAAEGIL-TVRGGMTSHAAVVARGMGTCCVSG 469 (873)
T ss_dssp EEEECSEEEEEEES-SH-HHHHHHHHTTCCEEEEESSCCGG-GHHHH-HHCSEEE-ESSCCTTSHHHHHHHHHTCEEEEC
T ss_pred ccccCceEEEEEEE-cH-HHHHHhhccCCCEEEEECCCCHH-HHHHH-HhccEEE-ecCCCCccHHHHHHhHcCCCEEEc
Confidence 56799999999754 22 11000012567889999988877 57653 4588998 556778999999999999998763
Q ss_pred cCchhHH--------HHH-hhcCCeEEEEEcC
Q 009825 113 EDDEKVS--------DIE-RLAGKYVRLEASS 135 (524)
Q Consensus 113 ~d~~~~~--------~l~-~~~g~~V~l~~~~ 135 (524)
-....++ ... -.+|.+|.+.-+.
T Consensus 470 ~~~~~i~~~~~~~~~~~~~l~~G~~vtvDG~~ 501 (873)
T 1kbl_A 470 CGEIKINEEAKTFELGGHTFAEGDYISLDGST 501 (873)
T ss_dssp CTTCEEETTTTEEEETTEEEETTCEEEEETTT
T ss_pred CCCceecccccEEEeCCeeecCCCEEEEECCC
Confidence 3221110 000 1358888776553
No 11
>1zym_A Enzyme I; phosphotransferase; 2.50A {Escherichia coli} SCOP: a.60.10.1 c.8.1.2 PDB: 1eza_A 1ezb_A 1ezc_A 1ezd_A 2eza_A 2ezb_A 2ezc_A 3ezb_A 3eze_A 3eza_A
Probab=94.32 E-value=0.013 Score=57.56 Aligned_cols=80 Identities=24% Similarity=0.284 Sum_probs=55.4
Q ss_pred CCCCCeEEEEeCCCCcccccccC-CCeEEEEecCCCCCccceeeeccCCceeEEEecCchhHHHHHhhcCCeEEEEEcCC
Q 009825 58 SGDEPVILAVSKADGDEEVAAAG-SNILGVILLQELPHLSHLGVRARQEKVVFVTCEDDEKVSDIERLAGKYVRLEASST 136 (524)
Q Consensus 58 ~~~~p~Il~~~~~~g~eeip~~~-~~V~gvi~~~~~~~LSHv~vrAR~~~v~~a~~~d~~~~~~l~~~~g~~V~l~~~~~ 136 (524)
..++|.||+++..+-. +++.-. ..+.||| +..+...||.++.||++|||-+.--. +.... -.+|+.|.+.....
T Consensus 151 ~~~~~~ILVa~~l~Ps-~~~~l~~~~~~giv-t~~Gg~tSH~AIlAR~lgIPavvg~~-~~~~~--~~~G~~v~vDg~~G 225 (258)
T 1zym_A 151 AIQDEVILVAADLTPS-ETAQLNLKKVLGFI-TDAGGRTSHTSIMARSLELPAIVGTG-SVTSQ--VKNDDYLILDAVNN 225 (258)
T ss_dssp GCCSCEEEECSCCCHH-HHHHSCGGGEEEEE-CSCCCSSSHHHHHHHHHTCCEECCCS-CHHHH--CCTTCEEEECCSSC
T ss_pred CCCCCeEEEECCCCHH-HHHhhchhhcEEEE-EcCCCcccHHHHHHHHcCCCEEEech-hHHHh--CCCCCEEEEECCCC
Confidence 3567899998877766 455421 3799998 56788899999999999999875332 22222 24599988876643
Q ss_pred ceEeee
Q 009825 137 CVNLNP 142 (524)
Q Consensus 137 ~~~~~~ 142 (524)
-+.+.+
T Consensus 226 ~v~~~p 231 (258)
T 1zym_A 226 QVYVNP 231 (258)
T ss_dssp CEEESC
T ss_pred eEEECc
Confidence 344433
No 12
>1vbg_A Pyruvate,orthophosphate dikinase; transferase, maize, riken structural genomics/proteomics INI RSGI, structural genomics; 2.30A {Zea mays} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1vbh_A*
Probab=94.03 E-value=0.0063 Score=69.48 Aligned_cols=101 Identities=22% Similarity=0.239 Sum_probs=65.0
Q ss_pred EeeceeeeEEEEEecccCCCCCCCCCCCCeEEEEeCCCCcccccccCCCeEEEEecCCCCCccceeeeccCCceeEEEec
Q 009825 34 VLVPGAAVGKLVQVDRISPGSLSSSGDEPVILAVSKADGDEEVAAAGSNILGVILLQELPHLSHLGVRARQEKVVFVTCE 113 (524)
Q Consensus 34 ~i~~g~a~G~l~~v~~l~~~~~~~~~~~p~Il~~~~~~g~eeip~~~~~V~gvi~~~~~~~LSHv~vrAR~~~v~~a~~~ 113 (524)
.++||.+.|++++ +. .+........+|.||+++..+-+ +++.- ..+.||| +..+-..||.+|.||++|||-++--
T Consensus 400 ~as~G~a~G~vv~-~~-~~~~~~~~~g~~~ILV~~~t~P~-~~~~~-~~a~Giv-T~~GG~tSHaAIvAR~lGiP~VvG~ 474 (876)
T 1vbg_A 400 PASPGAAVGQVVF-TA-EDAEAWHSQGKAAILVRAETSPE-DVGGM-HAAVGIL-TERGGMTSHAAVVARGWGKCCVSGC 474 (876)
T ss_dssp EEECSEEEEEEES-SH-HHHHHHHHTTCCEEEEESCCCTT-SHHHH-HHSSEEE-ESSCCTTSHHHHHHHHTTCCEEECC
T ss_pred ccCCCeEEEEEEE-CH-HHHHHHhhccCCEEEEEcCCCHH-HHHhH-hhccEEE-ECCCCCccHHHHHHhHcCCCEEEcC
Confidence 5789999999754 21 11000012567889999988887 57653 4578998 5577789999999999999988633
Q ss_pred CchhHH--------HHH-hhcCCeEEEEEcCCceEe
Q 009825 114 DDEKVS--------DIE-RLAGKYVRLEASSTCVNL 140 (524)
Q Consensus 114 d~~~~~--------~l~-~~~g~~V~l~~~~~~~~~ 140 (524)
....++ ... -.+|++|.+.-+. |..+
T Consensus 475 ~~~~~~~~~~~~~~~~~~l~~G~~vtvDG~~-G~V~ 509 (876)
T 1vbg_A 475 SGIRVNDAEKLVTIGGHVLREGEWLSLNGST-GEVI 509 (876)
T ss_dssp TTEEEEGGGTEEEETTEEEETTCEEEEETTT-TEEE
T ss_pred CCceeccccceEEeCCeeecCCCEEEEECCC-CEEE
Confidence 221110 000 1358888776653 4443
No 13
>2x0s_A Pyruvate phosphate dikinase; transferase, tropical parasite; 3.00A {Trypanosoma brucei}
Probab=93.71 E-value=0.019 Score=66.04 Aligned_cols=74 Identities=24% Similarity=0.255 Sum_probs=56.0
Q ss_pred eEeeceeeeEEEEEe-cccCCCCCCCCCCCCeEEEEeCCCCcccccccCCCeEEEEecCCCCCccceeeeccCCceeEEE
Q 009825 33 DVLVPGAAVGKLVQV-DRISPGSLSSSGDEPVILAVSKADGDEEVAAAGSNILGVILLQELPHLSHLGVRARQEKVVFVT 111 (524)
Q Consensus 33 ~~i~~g~a~G~l~~v-~~l~~~~~~~~~~~p~Il~~~~~~g~eeip~~~~~V~gvi~~~~~~~LSHv~vrAR~~~v~~a~ 111 (524)
...+||.|+|++++. +.... + ....++.||+.+..+-| .+|.- ....||| +..+-.-||.+|.||.+|||-+.
T Consensus 424 l~aspG~a~G~v~~~~~~~~~--~-~~~~~g~ILV~~~T~Pd-~~p~M-~~a~gIv-T~~GG~TSHAAIvAR~LGIPaVV 497 (913)
T 2x0s_A 424 LAASPGAAVGQVVFDAESAKE--W-SGRGKKVIMVRLETSPE-DLAGM-DAACGIL-TARGGMTSHAAVVARGMGKCCVS 497 (913)
T ss_dssp EEEESSEEEEEEESSHHHHHH--H-TTTTCCEEEEESSCCTT-SHHHH-TTSSEEE-ESSCCTTCHHHHHHHTTTCCEEE
T ss_pred cccCCccceeeEEechhHHHH--H-hhCCCceEEEcCCCCHH-HHHHH-HHHHHHH-HHccCCCChHHHHHHHcCCCeec
Confidence 467899999998753 22211 1 34566789999888888 67753 5778998 66777889999999999999885
Q ss_pred e
Q 009825 112 C 112 (524)
Q Consensus 112 ~ 112 (524)
-
T Consensus 498 G 498 (913)
T 2x0s_A 498 G 498 (913)
T ss_dssp C
T ss_pred C
Confidence 3
No 14
>2wqd_A Phosphoenolpyruvate-protein phosphotransferase; kinase, cytoplasm, transport, magnesium, PEP- utilising enzyme, phosphotransferase system; 2.40A {Staphylococcus aureus} PDB: 2hro_A
Probab=92.52 E-value=0.067 Score=58.31 Aligned_cols=78 Identities=12% Similarity=0.083 Sum_probs=54.7
Q ss_pred CCCCCeEEEEeCCCCcccccccC-CCeEEEEecCCCCCccceeeeccCCceeEEEecCchhHHHHHhhcCCeEEEEEcCC
Q 009825 58 SGDEPVILAVSKADGDEEVAAAG-SNILGVILLQELPHLSHLGVRARQEKVVFVTCEDDEKVSDIERLAGKYVRLEASST 136 (524)
Q Consensus 58 ~~~~p~Il~~~~~~g~eeip~~~-~~V~gvi~~~~~~~LSHv~vrAR~~~v~~a~~~d~~~~~~l~~~~g~~V~l~~~~~ 136 (524)
..++|.||+++..+-+ +++.-. .++.||| +..+...||.+|.||++|||-+.--. +.... -.+|++|.+.-...
T Consensus 153 ~~~~~~ILVa~~l~P~-~~~~l~~~~~~Giv-t~~Gg~tSHaAIvAR~lgIPaVvg~~-~~~~~--~~~G~~v~vDg~~G 227 (572)
T 2wqd_A 153 MIDESVVIVGNDLTPS-DTAQLNKEFVQGFA-TNIGGRTSASAIMSRSLEIPAIVGTK-SITQE--VKQGDMIIVDGLNG 227 (572)
T ss_dssp CCSCCEEEEESCCCHH-HHTTCCTTTEEEEE-ESSCCTTSHHHHHHHHTTCCEEECCS-SHHHH--CCTTCEEEEETTTT
T ss_pred cCCCCEEEEEcCCCHH-HHHhhChhceeEEE-EcCCCcccHHHHHHHHcCCCEEEech-hHHhh--CCCCCEEEEECCCC
Confidence 3467899999887776 566432 2599998 55777899999999999999875432 22222 24599998876643
Q ss_pred ceEe
Q 009825 137 CVNL 140 (524)
Q Consensus 137 ~~~~ 140 (524)
-+.+
T Consensus 228 ~V~~ 231 (572)
T 2wqd_A 228 DVIV 231 (572)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 3334
No 15
>2hwg_A Phosphoenolpyruvate-protein phosphotransferase; enzyme I, phosphoenolpyruvate:sugar phosphotransferase system, PTS; HET: NEP; 2.70A {Escherichia coli} PDB: 2kx9_A 2xdf_A 2l5h_A
Probab=92.36 E-value=0.067 Score=58.35 Aligned_cols=78 Identities=22% Similarity=0.242 Sum_probs=54.6
Q ss_pred CCCCCeEEEEeCCCCcccccccC-CCeEEEEecCCCCCccceeeeccCCceeEEEecCchhHHHHHhhcCCeEEEEEcCC
Q 009825 58 SGDEPVILAVSKADGDEEVAAAG-SNILGVILLQELPHLSHLGVRARQEKVVFVTCEDDEKVSDIERLAGKYVRLEASST 136 (524)
Q Consensus 58 ~~~~p~Il~~~~~~g~eeip~~~-~~V~gvi~~~~~~~LSHv~vrAR~~~v~~a~~~d~~~~~~l~~~~g~~V~l~~~~~ 136 (524)
..++|.||+++..+-+ +++.-. .++.||| +..+...||.+|.||++|||-+.--. +.... -.+|++|.+.-...
T Consensus 151 ~~~~~~ILVa~~l~Ps-~~~~l~~~~~~Giv-t~~Gg~tSHaAIvAR~lgIPaVvG~~-~~~~~--~~~G~~v~vDg~~G 225 (575)
T 2hwg_A 151 AIQDEVILVAADLTPS-ETAQLNLKKVLGFI-TDAGGRTSHTSIMARSLELPAIVGTG-SVTSQ--VKNDDYLILDAVNN 225 (575)
T ss_dssp GCCSCEEEEESCCCHH-HHHTCCTTTEEEEE-ESSCCTTSHHHHHHHHTTCCEEECCS-CHHHH--CCTTCEEEEETTTT
T ss_pred cCCCCEEEEEcCCCHH-HHHHhCccceeEEE-EcCCCcccHHHHHHHHCCCCEEEcch-hHHhh--CCCCCEEEEECCCC
Confidence 3467899999887776 566432 2599998 55777899999999999999775432 22222 24599998876643
Q ss_pred ceEe
Q 009825 137 CVNL 140 (524)
Q Consensus 137 ~~~~ 140 (524)
-+.+
T Consensus 226 ~V~~ 229 (575)
T 2hwg_A 226 QVYV 229 (575)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 3334
Done!