Query 009825
Match_columns 524
No_of_seqs 226 out of 1477
Neff 6.9
Searched_HMMs 13730
Date Mon Mar 25 13:50:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009825.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/009825hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1h6za3 d.142.1.5 (A:1-405) Py 100.0 2.3E-40 1.7E-44 347.3 7.1 294 189-524 4-368 (405)
2 d1kbla3 d.142.1.5 (A:2-376) Py 100.0 1.9E-41 1.4E-45 351.0 -30.4 312 189-524 2-340 (375)
3 d1vbga3 d.142.1.5 (A:3-382) Py 100.0 4.5E-41 3.2E-45 349.8 -28.2 301 199-524 17-342 (380)
4 d1zyma2 c.8.1.2 (A:3-21,A:145- 98.2 4.3E-07 3.1E-11 77.8 3.7 102 34-142 4-106 (124)
5 d1h6za2 c.8.1.1 (A:406-537) Py 97.0 0.00016 1.2E-08 62.0 3.6 75 34-114 19-94 (132)
6 d1vbga2 c.8.1.1 (A:383-517) Py 96.9 5.3E-05 3.9E-09 65.3 -0.6 75 34-114 18-93 (135)
7 d1kbla2 c.8.1.1 (A:377-509) Py 96.4 0.00014 1E-08 62.4 -1.4 75 33-112 20-94 (133)
8 d2hi6a1 c.8.2.3 (A:1-132) Hypo 93.8 0.046 3.3E-06 46.1 6.1 94 33-135 6-125 (132)
9 d1a9xa6 d.142.1.2 (A:677-935) 33.5 27 0.002 31.3 5.9 38 484-521 129-168 (259)
10 d1zavu1 a.108.1.1 (U:1-30) Rib 30.6 18 0.0013 21.1 2.5 16 485-500 15-30 (30)
No 1
>d1h6za3 d.142.1.5 (A:1-405) Pyruvate phosphate dikinase, N-terminal domain {Trypanosoma brucei [TaxId: 5691]}
Probab=100.00 E-value=2.3e-40 Score=347.26 Aligned_cols=294 Identities=16% Similarity=0.129 Sum_probs=185.1
Q ss_pred eEEEEcc----cc-cCCccccChhhhchHHHHhhhccccccccCCCCCCccccCCeEEECHHHHHHHHHhcCChhHHHHH
Q 009825 189 TGVILLA----DA-DADAMTSGAKAAACGRLASLSAVSEKVYSDQGVPASFLVPAGVVIPFGSMQLALEQSKCMDTFVSF 263 (524)
Q Consensus 189 ~~~~~l~----~~-~~~~~~vG~KAanL~~L~~~~~~~~~~~~~~~~p~~~~VP~gfvIpf~~f~~~l~~~~~~~~i~~l 263 (524)
.++++|+ +. ..+..+||||++|||+|.+ .|++||+|||||+.+|++|+++|++.+.+...
T Consensus 4 ~~~~~~~~~~~~~~~~~~~lVGGK~AnLgel~~---------------~GipVP~GFvITt~Ay~~Fl~~n~L~~~i~~~ 68 (405)
T d1h6za3 4 KWVYYFGGGNADGNKNMKELLGGKGANLAEMVN---------------LGIPVPPGFTITTEACKTYQETETIPQEVADQ 68 (405)
T ss_dssp CCEEEECSSSCSCCTTCHHHHHHHHHHHHHHHH---------------TTCCCCCEEEECHHHHTTTTTSSCCCHHHHHH
T ss_pred cEEEEcCCCcccCCcchHhhccHHHHHHHHHHH---------------CcCCCCCCEEehHHHHHHHHHcCCCcHHHHHH
Confidence 5788886 33 3688899999999999977 68999999999999999999999887666443
Q ss_pred H----HHhhhcCC----Cc-hhHH--------HHHHHHHHHHHhcCCCHHHHHHHHHhCCCCcceEEccCCCccCc----
Q 009825 264 L----EQIETAGP----EG-GELD--------NLCCQLQELISALQPSEDIIESIERIFPANAHLIVRSSANVEDL---- 322 (524)
Q Consensus 264 l----~~l~~~~~----~~-~~l~--------~~~~~ir~~I~~~~~p~~l~~~l~~~~~~~~~vaVRSSa~~ED~---- 322 (524)
+ ..++.... +. ..+. .........+....+......++.+........+.+|++..+|+
T Consensus 69 i~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~s~~~~~~~~~~~ 148 (405)
T d1h6za3 69 VRENVSRVEKEMGAKFGDPANPLLFSVRSGAAASMPGMMDTVLNLGLNKVTVDAWVRRAPRLERFVYDSYRRFITMYADI 148 (405)
T ss_dssp HHHHHHHHHHHHCCBTTCTTSBCCEEEEESCTTC-----CCCCSBSCCHHHHHHHGGGCGGGHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhHHhhhhhccccchhhhhcccccchhhhhhhhhhhhhhhhhhhHHHHHHhcccchhhHHHHHHHHHHhhccc
Confidence 3 22221000 00 0000 00000000000111112222222211111111111111111111
Q ss_pred ----------------------------------------cCCcccccccccCcCCCCcHHHHHHHHHHHHHhcCChhHH
Q 009825 323 ----------------------------------------AGMSAAGLYESIPNVNPSNLRVFQNAVARVWASLYTRRAV 362 (524)
Q Consensus 323 ----------------------------------------~~~S~AG~~~S~lnv~~~~~~~l~~AIk~VWAS~~~~rA~ 362 (524)
....+.+++.+ +++. +.+++..+|+.||+|+|++|+.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~l~~ai~~v~~S~~~~~a~ 225 (405)
T d1h6za3 149 VMQVGREDFEEALSRMKERRGTKFDTDLTASDLKELCDGYLELFELKTGCS-FPQD--PVMQLFAAIKAVFRSWGNPRAT 225 (405)
T ss_dssp HHCCCSTTTSTTTHHHHHHHSCSCGGGCCHHHHHHHHHTTHHHHHHHSSSC-CCCC--HHHHHHHHHHHHHHTTTCTTTT
T ss_pred ccccchhHHHHHHHHHHHhccccccccCcHHHHHHHHHHHHHhhhhhcCCc-cccc--chHHhHHHHHHHHhhhcCchHH
Confidence 11111222222 2333 5789999999999999999999
Q ss_pred HHHHHhCCCCcCCceeEEEEe-----ecCCCeEEEEEecCCCCCCCCeEEEEeccCCCccccccccCCceeEEecccCCc
Q 009825 363 LSRRAAGVSQKDATMAVLVQE-----MLSPDLSFVLHTLSPTDRDHNSVEAEIAPGLGETLASGTRGTPWRLSSGKFDGL 437 (524)
Q Consensus 363 ~yR~~~Gi~~~~~~MAVLVQ~-----mV~a~~SGVl~T~nP~~g~~~~i~ie~~~GLGe~lV~G~~g~p~~~~~~k~~~~ 437 (524)
.||..+++++. ..+++++|. |+....+||+||.||.+|+.+.+.+++++|+|+.+|+|.. +|+.+..++....
T Consensus 226 ~yr~~~~~~~~-~~~~~~~~~v~~~~~~~~~~sgv~~t~~~~tG~~~~~~~~~~~g~~~~vv~G~~-~~~~~~~~~~~~~ 303 (405)
T d1h6za3 226 IYRRMNNITGL-LGTAVNVQAMVFGNINDRSATGVAFSRSPSTGENFFFGEYLVNAQGEDVVAGIR-TPQQINHSLSLRW 303 (405)
T ss_dssp THHHHSCCCSC-CCCCEEEEECCCSCSSTTCEEEEEESSCSSSCCSSCEEEEEESCCTTHHHHCCS-CCEESSHHHHHHH
T ss_pred HHHHhcCccch-hhhhheeeeeeecccccccccccccccCCCCCCCceeeEecccCcceeeccCcc-CCceeeeecccch
Confidence 99999999864 445555554 4556789999999999999999999999999999999996 7877765554322
Q ss_pred eeEEeecccceeEEeeccCCCCCcEEEEeecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCEEEEEEEECCeEEEE
Q 009825 438 VRTQAFANFSEEMLVSGAGPADGVVIRLTVDYSKKPLTVDPIFRRQLGQRLCSVGFFLERKFGCPQDVEGCLVGKDIYAV 517 (524)
Q Consensus 438 v~~~~~~~~~~~l~~~~~~~~~g~~~~~~v~~~~~~l~~d~~~r~~~~~~La~~a~~lE~~fg~pqDIEw~i~~~~l~Il 517 (524)
.....+..+.. ...+ ...+.+..+.+++|+++|.+||++||+|||||||+++++||||
T Consensus 304 ~~~~~~~~~~~-----------------~~~~-----~~~~~l~~e~~~~La~l~~~iE~~fg~PqDIEWAi~dg~L~IL 361 (405)
T d1h6za3 304 AKAHGVGEEER-----------------RKRY-----PSMEEAMPENYRLLCDVRKRLENHYRDMQDLEFTVQDGRLWLL 361 (405)
T ss_dssp HTTSSCCHHHH-----------------HHHS-----CCHHHHSHHHHHHHHHHHHHHHHHHTSCEEEEEEEETTEEEEE
T ss_pred hhccccceecc-----------------cccc-----cchhhcCHHHHHHHHHHHHHHHHHcCCCcceEEEEECCEEEEE
Confidence 11111110000 0000 0112233456899999999999999999999999999999999
Q ss_pred eeecccC
Q 009825 518 QTRPQPH 524 (524)
Q Consensus 518 Q~RP~~~ 524 (524)
|+||+++
T Consensus 362 QaRPv~~ 368 (405)
T d1h6za3 362 QCRNGKR 368 (405)
T ss_dssp EEEECCC
T ss_pred EccCCCc
Confidence 9999853
No 2
>d1kbla3 d.142.1.5 (A:2-376) Pyruvate phosphate dikinase, N-terminal domain {Clostridium symbiosum [TaxId: 1512]}
Probab=100.00 E-value=1.9e-41 Score=350.98 Aligned_cols=312 Identities=11% Similarity=-0.022 Sum_probs=200.5
Q ss_pred eEEEEccccc-CCccccChhhhchHHHHhhhccccccccCCCCCCccccCCeEEECHHHHHHHHHhcC-----ChhHHHH
Q 009825 189 TGVILLADAD-ADAMTSGAKAAACGRLASLSAVSEKVYSDQGVPASFLVPAGVVIPFGSMQLALEQSK-----CMDTFVS 262 (524)
Q Consensus 189 ~~~~~l~~~~-~~~~~vG~KAanL~~L~~~~~~~~~~~~~~~~p~~~~VP~gfvIpf~~f~~~l~~~~-----~~~~i~~ 262 (524)
.||+||+|.. .+..+||||++|||+|.+ .||+||+|||||+.+|++||++|+ +.+.+.+
T Consensus 2 k~v~~f~e~~~~d~~lvGGK~AnLgel~~---------------~G~pVP~GFviTt~Ay~~Fl~~n~~~~~~l~~~i~~ 66 (375)
T d1kbla3 2 KWVYKFEEGNASMRNLLGGKGCNLAEMTI---------------LGMPIPQGFTVTTEACTEYYNSGKQITQEIQDQIFE 66 (375)
T ss_dssp CCEEEGGGCCGGGHHHHHHHHHHHHHHHH---------------TTCCCCCEEEECHHHHHHHHTTSSCCCHHHHHHHHH
T ss_pred CEEEECCCCCchhhhcCcHHHHHHHHHHH---------------CcCCCCCCEEecHHHHHHHHHhcccCcHHHHHHHHH
Confidence 4799999974 789999999999999977 789999999999999999999874 4555555
Q ss_pred HHHHhhhcCCCchhHHHHHHHHHHHHHhcCCCHHHHH---HHHHhCCCCcceEEccCCCccCccCCcccccccccCcCCC
Q 009825 263 FLEQIETAGPEGGELDNLCCQLQELISALQPSEDIIE---SIERIFPANAHLIVRSSANVEDLAGMSAAGLYESIPNVNP 339 (524)
Q Consensus 263 ll~~l~~~~~~~~~l~~~~~~ir~~I~~~~~p~~l~~---~l~~~~~~~~~vaVRSSa~~ED~~~~S~AG~~~S~lnv~~ 339 (524)
.++.++..... .+......++..+.....|..... .+...+.......+++++..||.+..+++|++++++++..
T Consensus 67 ~l~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 144 (375)
T d1kbla3 67 AITWLEELNGK--KFGDTEDPLLVSVRSGARASMPGMMDTILNLGLNDVAVEGFAKKTGNPRFAYDSYRRFIQMYSDVVM 144 (375)
T ss_dssp HHHHHHHHHTS--CBTCSSSCBCEEEEEECSSCCTTSSCEEEEETCCTTHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHhhhhhcCc--cccccccchhhccccccccccchhhhhHhhhhccchhhhhHhhhccchhhhcccchhhhhhhhhhcc
Confidence 55554421000 000000000111111111111110 0111122344567788899999999999999999988754
Q ss_pred CcHHHHHHHHHHHH------------------HhcCChhHHHHHHHhCCCCcCCceeEEEEeecCCCeEEEEEecCCCCC
Q 009825 340 SNLRVFQNAVARVW------------------ASLYTRRAVLSRRAAGVSQKDATMAVLVQEMLSPDLSFVLHTLSPTDR 401 (524)
Q Consensus 340 ~~~~~l~~AIk~VW------------------AS~~~~rA~~yR~~~Gi~~~~~~MAVLVQ~mV~a~~SGVl~T~nP~~g 401 (524)
..+. ...+.+| .+.+..+++.++.+.++......|+|++|.|+....+||+||.||.++
T Consensus 145 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~q~~~~~~a~gv~~t~~~~~~ 221 (375)
T d1kbla3 145 EVPK---SHFEKIIDAMKEEKGVHFDTDLTADDLKELAEKFKAVYKEAMNGEEFPQEPKDQLMGAVKAVFRSWDNPRAIV 221 (375)
T ss_dssp CCCH---HHHHHHHHHHHHHTCCCSGGGCCHHHHHHHHHHHHHHHHTTTTTCCCCCCHHHHHHHHHHHHHHHTTSHHHHH
T ss_pred chhh---hHHHHHHHhhhhccchHHHHHhHHHHHHHHHHHHHHHHHHhhcCCcccccceeeeeeeeeeeEEecccccccc
Confidence 3222 2233333 333456778888889998889999999999999999999999999999
Q ss_pred CCCeEEEEeccCCCccccccccCCceeEEecccCCceeEEeecccceeEEeeccCCCCCcEEEEeecCCCCCCCCCHHHH
Q 009825 402 DHNSVEAEIAPGLGETLASGTRGTPWRLSSGKFDGLVRTQAFANFSEEMLVSGAGPADGVVIRLTVDYSKKPLTVDPIFR 481 (524)
Q Consensus 402 ~~~~i~ie~~~GLGe~lV~G~~g~p~~~~~~k~~~~v~~~~~~~~~~~l~~~~~~~~~g~~~~~~v~~~~~~l~~d~~~r 481 (524)
..+.+.++.++|+|+.+|+|.. .++.+...+............+..............+... ....++....+.+.
T Consensus 222 ~~~~~~i~~~~glg~~vv~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~ 297 (375)
T d1kbla3 222 YRRMNDIPGDWGTAVNVQTMVF-GNKGETSGTGVAFTRNPSTGEKGIYGEYLINAQGEDVVAG---VRTPQPITQLENDM 297 (375)
T ss_dssp HHHHTTCCGGGCCEEEEEECCC-TTSSTTCEEEEEEEECTTTCCEEEEEEEEESCCHHHHHHT---SSCCEEGGGHHHHC
T ss_pred ccceeeccccccccceeecccc-cCCCcccccccccccCccccccccccceeecccccccccc---eecccccccchhcC
Confidence 8888899999999999999985 4544444332111110000111111000000000000000 00001111112333
Q ss_pred HHHHHHHHHHHHHHHHhhCCCEEEEEEEECCeEEEEeeecccC
Q 009825 482 RQLGQRLCSVGFFLERKFGCPQDVEGCLVGKDIYAVQTRPQPH 524 (524)
Q Consensus 482 ~~~~~~La~~a~~lE~~fg~pqDIEw~i~~~~l~IlQ~RP~~~ 524 (524)
.+.+++|+++|.+||++||+|||||||+++|+|||||+||+++
T Consensus 298 ~~~~~eLa~~a~~iE~~yG~PqDIEWAi~dG~l~ILQaRPv~~ 340 (375)
T d1kbla3 298 PDCYKQFMDLAMKLEKHFRDMQDMEFTIEEGKLYFLQTRNGKR 340 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCEEEEEEEETTEEEEEEEEECCC
T ss_pred cHHHHHHHHHHHHHHHHhCCcceeEEEEECCEEEEEEccCCCc
Confidence 4567899999999999999999999999999999999999863
No 3
>d1vbga3 d.142.1.5 (A:3-382) Pyruvate phosphate dikinase, N-terminal domain {Maize (Zea mays) [TaxId: 4577]}
Probab=100.00 E-value=4.5e-41 Score=349.82 Aligned_cols=301 Identities=14% Similarity=-0.004 Sum_probs=185.7
Q ss_pred CCccccChhhhchHHHHhhhccccccccCCCCCCccccCCeEEECHHHHHHHHHhc-----CChhHHHHHHHHhhhcCCC
Q 009825 199 ADAMTSGAKAAACGRLASLSAVSEKVYSDQGVPASFLVPAGVVIPFGSMQLALEQS-----KCMDTFVSFLEQIETAGPE 273 (524)
Q Consensus 199 ~~~~~vG~KAanL~~L~~~~~~~~~~~~~~~~p~~~~VP~gfvIpf~~f~~~l~~~-----~~~~~i~~ll~~l~~~~~~ 273 (524)
++.++||||++|||+|.+ .|||||+|||||+.+|++||++| ++++.+...+..++.....
T Consensus 17 ~~~~lvGGK~AnLgel~~---------------~G~pVP~GFvITt~Ay~~Fi~~n~~l~~~L~~~I~~~l~~~~~~~~~ 81 (380)
T d1vbga3 17 TMKELLGGKGANLAEMAS---------------IGLSVPPGFTVSTEACQQYQDAGCALPAGLWAEIVDGLQWVEEYMGA 81 (380)
T ss_dssp TCTTTTHHHHHHHHHHHH---------------TTCCCCCEEEECHHHHHHHHHTTSCCCTTHHHHHHHHHHHHHHHHTC
T ss_pred chHhhCcHHHHHHHHHHH---------------CcCCCCCCEEeeHHHHHHHHHcCccccHHHHHHHHHHHHHHHHhhcc
Confidence 688899999999999976 78999999999999999999987 4566666555544321000
Q ss_pred c-hhHHHHHHHHHHHHHhcCCCHHH--HHHHHHhCCCCcceEEccCCCccCccCCcccccccccCcCCCCcHH----HH-
Q 009825 274 G-GELDNLCCQLQELISALQPSEDI--IESIERIFPANAHLIVRSSANVEDLAGMSAAGLYESIPNVNPSNLR----VF- 345 (524)
Q Consensus 274 ~-~~l~~~~~~ir~~I~~~~~p~~l--~~~l~~~~~~~~~vaVRSSa~~ED~~~~S~AG~~~S~lnv~~~~~~----~l- 345 (524)
. .... ..+...+.....+... ...+.........+++|++...||.+..|++|++++++++...... ..
T Consensus 82 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~e~~a~~s~a~~~~~~~~~~~~~~~~~~~~~~ 158 (380)
T d1vbga3 82 TLGDPQ---RPLLLSVRSGAAVSMPGMMDTVLNLGLNDEVAAGLAAKSGERFAYDSFRRFLDMFGNVVMDIPRSLFEEKL 158 (380)
T ss_dssp BTTCSS---SBCCEEEECCCSSCCTTCCCCEEEETCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHH
T ss_pred cccccc---cchhhcccccchhhhhHhHHHHHhcccchHHHHHHhhccccchHhhhhhhhhhccchhcccchhhhHHHHH
Confidence 0 0000 0000000000000000 0000000112345678899999999999999999998877533211 11
Q ss_pred --------HHHHHHHHHhcCChhHHH----HHHHhCCCCcCCceeEEEEeecCCCeEEEEEecCCCCCCCCeEEEEeccC
Q 009825 346 --------QNAVARVWASLYTRRAVL----SRRAAGVSQKDATMAVLVQEMLSPDLSFVLHTLSPTDRDHNSVEAEIAPG 413 (524)
Q Consensus 346 --------~~AIk~VWAS~~~~rA~~----yR~~~Gi~~~~~~MAVLVQ~mV~a~~SGVl~T~nP~~g~~~~i~ie~~~G 413 (524)
..+++.+|+|.|+.++.. |+..+|. ...|+|++|.|+.++.+||+||.||.+++.+.+.|+.+||
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~q~m~~~~~~gv~ft~~p~~~~~~~~~I~a~~G 235 (380)
T d1vbga3 159 EHMKESKGLKNDTDLTASDLKELVGQYKEVYLSAKGE---PFPSDPKKQLELAVLAVFNSWESPRAKKYRSINQITGLRG 235 (380)
T ss_dssp HHHHHHHTCSSGGGCCHHHHHHHHHHHHHHHHHHHSS---CCCCCHHHHHHHHHHHHHHHTTCHHHHHHHHTTTCCCCCC
T ss_pred HHHHHhhcchhhhhccHHHhhhHHHHHHHHhhhhcCC---ccccchHHHHHHhhhheeecccCCcccccccceeeccccc
Confidence 123444455555555444 4455554 4578999999999999999999999999989999999999
Q ss_pred CCccccccccCCceeEEecccCCceeEEeecccceeEEeeccCCCCCcEEEEeecCCCCCCCCCHHHHHHHHHHHHHHHH
Q 009825 414 LGETLASGTRGTPWRLSSGKFDGLVRTQAFANFSEEMLVSGAGPADGVVIRLTVDYSKKPLTVDPIFRRQLGQRLCSVGF 493 (524)
Q Consensus 414 LGe~lV~G~~g~p~~~~~~k~~~~v~~~~~~~~~~~l~~~~~~~~~g~~~~~~v~~~~~~l~~d~~~r~~~~~~La~~a~ 493 (524)
+|+.+|+|.. +++.+.+.+..........+.+.............+++....+ .......+.+.++.+.+|++++.
T Consensus 236 lg~~vv~g~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~La~l~~ 311 (380)
T d1vbga3 236 TAVNVQCMVF-GNMGNTSGTGVLFTRNPNTGEKKLYGEFLVNAQGEDVVAGIRT---PEDLDAMKNLMPQAYDELVENCN 311 (380)
T ss_dssp CCEEEEECCC-SCSSTTCEEEEEESSCTTTCCSSCEEEEEESSCHHHHHHTSCC---CEETHHHHHHCHHHHHHHHHHHH
T ss_pred cceeeeeeee-cCCCcEecCccccccccccCcceeeeeeccccccccccceeec---ccccchhhhcCHHHHHHHHHHHH
Confidence 9999999986 5555544332111100001111111110000000000000000 01111223444567899999999
Q ss_pred HHHHhhCCCEEEEEEEECCeEEEEeeecccC
Q 009825 494 FLERKFGCPQDVEGCLVGKDIYAVQTRPQPH 524 (524)
Q Consensus 494 ~lE~~fg~pqDIEw~i~~~~l~IlQ~RP~~~ 524 (524)
+||++||+|||||||+++|+|||||+||+++
T Consensus 312 ~iE~~yg~PqDIEWA~~dg~L~ILQaRPv~~ 342 (380)
T d1vbga3 312 ILESHYKEMQDIEFTVQENRLWMLQCRTGKR 342 (380)
T ss_dssp HHHHHHCSCEEEEEEEETTEEEEEEEEECCC
T ss_pred HHHHHcCCcceeEEEEECCEEEEEEccCCCc
Confidence 9999999999999999999999999999864
No 4
>d1zyma2 c.8.1.2 (A:3-21,A:145-249) N-terminal domain of enzyme I of the PEP:sugar phosphotransferase system {Escherichia coli [TaxId: 562]}
Probab=98.16 E-value=4.3e-07 Score=77.84 Aligned_cols=102 Identities=25% Similarity=0.299 Sum_probs=71.8
Q ss_pred EeeceeeeEEEEEecccCCCCCCCCCCCCeEEEEeCCCCcccccc-cCCCeEEEEecCCCCCccceeeeccCCceeEEEe
Q 009825 34 VLVPGAAVGKLVQVDRISPGSLSSSGDEPVILAVSKADGDEEVAA-AGSNILGVILLQELPHLSHLGVRARQEKVVFVTC 112 (524)
Q Consensus 34 ~i~~g~a~G~l~~v~~l~~~~~~~~~~~p~Il~~~~~~g~eeip~-~~~~V~gvi~~~~~~~LSHv~vrAR~~~v~~a~~ 112 (524)
+.+||.+.|+++++..-.. .+ ...+++.||+++..+-.+ ++. ...++.||| +..+...||.++.||++|||.+..
T Consensus 4 ~as~G~~~G~v~~~~~~~~-~~-~~~~~~~ILV~~~l~P~~-~~~l~~~~v~Gii-t~~Gg~tSH~AIlAR~lgIP~vvg 79 (124)
T d1zyma2 4 LASPGIAFGKALLLKEKII-DL-SAIQDEVILVAADLTPSE-TAQLNLKKVLGFI-TDAGGRTSHTSIMARSLELPAIVG 79 (124)
T ss_dssp CSBCCCEEEEEEECCCCCC-CG-GGCCSCEEEECSCCCHHH-HHHSCGGGEEEEE-CSCCCSSSHHHHHHHHHTCCEECC
T ss_pred CCCCeEEEEEEEEECCcHH-HH-HhCCCCEEEEEccCCHHH-HhhhChhheEEEE-EecCCcccHHHHHHHHcCCCEEEE
Confidence 4689999999998765222 11 356789999998776553 332 125799999 577788999999999999999964
Q ss_pred cCchhHHHHHhhcCCeEEEEEcCCceEeee
Q 009825 113 EDDEKVSDIERLAGKYVRLEASSTCVNLNP 142 (524)
Q Consensus 113 ~d~~~~~~l~~~~g~~V~l~~~~~~~~~~~ 142 (524)
-. +.... -.+|+.|.+.....-+.+.+
T Consensus 80 ~~-~~~~~--i~~g~~v~vDg~~G~v~~~P 106 (124)
T d1zyma2 80 TG-SVTSQ--VKNDDYLILDAVNNQVYVNP 106 (124)
T ss_dssp CS-CHHHH--CCTTCEEEECCSSCCEEESC
T ss_pred cc-cHHHH--hcCCCEEEEECCCCEEEECC
Confidence 42 22322 24689988877755454543
No 5
>d1h6za2 c.8.1.1 (A:406-537) Pyruvate phosphate dikinase, central domain {Trypanosoma brucei [TaxId: 5691]}
Probab=97.04 E-value=0.00016 Score=61.99 Aligned_cols=75 Identities=24% Similarity=0.255 Sum_probs=57.4
Q ss_pred EeeceeeeEEEEE-ecccCCCCCCCCCCCCeEEEEeCCCCcccccccCCCeEEEEecCCCCCccceeeeccCCceeEEEe
Q 009825 34 VLVPGAAVGKLVQ-VDRISPGSLSSSGDEPVILAVSKADGDEEVAAAGSNILGVILLQELPHLSHLGVRARQEKVVFVTC 112 (524)
Q Consensus 34 ~i~~g~a~G~l~~-v~~l~~~~~~~~~~~p~Il~~~~~~g~eeip~~~~~V~gvi~~~~~~~LSHv~vrAR~~~v~~a~~ 112 (524)
..+||.+.|++++ ++..... ....+..||++...+.+ .+|.- ..+.||| +...-.+||.++-||++|||-+..
T Consensus 19 ~as~G~~~G~v~~~~~~~~~~---~~~~~~~ILV~~~t~p~-~~~~~-~~a~giv-te~GG~tSHaAivARelgiP~VvG 92 (132)
T d1h6za2 19 AASPGAAVGQVVFDAESAKEW---SGRGKKVIMVRLETSPE-DLAGM-DAACGIL-TARGGMTSHAAVVARGMGKCCVSG 92 (132)
T ss_dssp EEESCEEEEEEESSHHHHHST---TTTSCCEEEEESSCCGG-GCTTT-TTSSEEE-ESSCCTTCHHHHHHHHTTCCEEEC
T ss_pred cCCCCeEEEEEEEechhHHHH---hhccCCeEEEeccCCch-hhhhh-hhhccce-ecccccchHHHHHHhhcCCceEec
Confidence 5689999999876 3443321 34456789998888777 67753 6889998 666778999999999999999875
Q ss_pred cC
Q 009825 113 ED 114 (524)
Q Consensus 113 ~d 114 (524)
-.
T Consensus 93 ~~ 94 (132)
T d1h6za2 93 CG 94 (132)
T ss_dssp CT
T ss_pred cc
Confidence 43
No 6
>d1vbga2 c.8.1.1 (A:383-517) Pyruvate phosphate dikinase, central domain {Maize (Zea mays) [TaxId: 4577]}
Probab=96.92 E-value=5.3e-05 Score=65.32 Aligned_cols=75 Identities=24% Similarity=0.259 Sum_probs=57.1
Q ss_pred EeeceeeeEEEEEecc-cCCCCCCCCCCCCeEEEEeCCCCcccccccCCCeEEEEecCCCCCccceeeeccCCceeEEEe
Q 009825 34 VLVPGAAVGKLVQVDR-ISPGSLSSSGDEPVILAVSKADGDEEVAAAGSNILGVILLQELPHLSHLGVRARQEKVVFVTC 112 (524)
Q Consensus 34 ~i~~g~a~G~l~~v~~-l~~~~~~~~~~~p~Il~~~~~~g~eeip~~~~~V~gvi~~~~~~~LSHv~vrAR~~~v~~a~~ 112 (524)
..+||.+.|+++++.+ ... .....+..||++...+.| .+|.- ..+.||| +...-.+||-+|-||++|+|-+..
T Consensus 18 ~as~G~~~G~v~~~~~~~~~---~~~~~~g~ILV~~~t~p~-~~~~m-~~a~gIV-te~GG~tSHaAivARelgiP~VvG 91 (135)
T d1vbga2 18 PASPGAAVGQVVFTAEDAEA---WHSQGKAAILVRAETSPE-DVGGM-HAAVGIL-TERGGMTSHAAVVARGWGKCCVSG 91 (135)
T ss_dssp EEECSEEEEEEESSHHHHHH---HHHTTCCEEEEESCCCTT-SHHHH-HHSSEEE-ESSCCTTSHHHHHHHHTTCCEEEC
T ss_pred ccCCCeEEEEEEEEchhHHH---hhhccCceEEEEccCCHH-Hhhhh-hheeEEE-EecCCccchHHHHHHhcCCceEec
Confidence 4699999999887643 221 124456689999998888 67753 5678998 556778999999999999998865
Q ss_pred cC
Q 009825 113 ED 114 (524)
Q Consensus 113 ~d 114 (524)
-.
T Consensus 92 ~~ 93 (135)
T d1vbga2 92 CS 93 (135)
T ss_dssp CT
T ss_pred cc
Confidence 43
No 7
>d1kbla2 c.8.1.1 (A:377-509) Pyruvate phosphate dikinase, central domain {Clostridium symbiosum [TaxId: 1512]}
Probab=96.43 E-value=0.00014 Score=62.42 Aligned_cols=75 Identities=23% Similarity=0.212 Sum_probs=55.2
Q ss_pred eEeeceeeeEEEEEecccCCCCCCCCCCCCeEEEEeCCCCcccccccCCCeEEEEecCCCCCccceeeeccCCceeEEEe
Q 009825 33 DVLVPGAAVGKLVQVDRISPGSLSSSGDEPVILAVSKADGDEEVAAAGSNILGVILLQELPHLSHLGVRARQEKVVFVTC 112 (524)
Q Consensus 33 ~~i~~g~a~G~l~~v~~l~~~~~~~~~~~p~Il~~~~~~g~eeip~~~~~V~gvi~~~~~~~LSHv~vrAR~~~v~~a~~ 112 (524)
...+||.+.|+++++...... .....+..||+....+.+ .+|.- ....||| +...-.+||-++-||++|+|-+.-
T Consensus 20 ~~aspG~a~G~v~~~~~~~~~--~~~~~~~~ILv~~~t~p~-~~~~~-~~a~giv-te~GG~tSHaAivaRelGiP~VvG 94 (133)
T d1kbla2 20 LPASPGAAAGKVYFTADEAKA--AHEKGERVILVRLETSPE-DIEGM-HAAEGIL-TVRGGMTSHAAVVARGMGTCCVSG 94 (133)
T ss_dssp EEEECSEEEEEEESSHHHHHH--HHHTTCCEEEEESSCCGG-GHHHH-HHCSEEE-ESSCCTTSHHHHHHHHHTCEEEEC
T ss_pred ccCCCCcEEEEEEEeehHHHH--HhccCCCeEEEeccCCch-hhhhh-heeeEEE-EecCcccccHHHhhhhcCccEEEe
Confidence 456999999998876432211 134556688887777766 67753 5678998 566778999999999999998854
No 8
>d2hi6a1 c.8.2.3 (A:1-132) Hypothetical protein AF0055 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=93.77 E-value=0.046 Score=46.08 Aligned_cols=94 Identities=19% Similarity=0.234 Sum_probs=65.2
Q ss_pred eEeeceeeeEEEEEecc-cCC--------CCC------CCCCCCCeEEEEeCCCCcccccccCCCe-----------EEE
Q 009825 33 DVLVPGAAVGKLVQVDR-ISP--------GSL------SSSGDEPVILAVSKADGDEEVAAAGSNI-----------LGV 86 (524)
Q Consensus 33 ~~i~~g~a~G~l~~v~~-l~~--------~~~------~~~~~~p~Il~~~~~~g~eeip~~~~~V-----------~gv 86 (524)
.++++|.+.|.+.+++. ++- +.+ ....-...||++....|.= .| .-| +|+
T Consensus 6 ~~i~~G~~~G~alv~~~p~Sf~ggvd~~tGii~~~h~l~g~~~~gkILv~p~~~gSt-~~---~~vl~~~~~~g~aPaA~ 81 (132)
T d2hi6a1 6 RAITRGRAEGEALVTKEYISFLGGIDKETGIVKEDCEIKGESVAGRILVFPGGKGST-VG---SYVLLNLRKNGVAPKAI 81 (132)
T ss_dssp EESSCCEEEEEEEECCSCCCTTSCBCTTTCBBCSCSSSTTCBCTTSEEEESCCSCCS-SC---TTHHHHHHHHTCSCSEE
T ss_pred EEeeccEEEEEEEEECCCcccccccCCCccEEecCccccCccccCcEEEeecCCCCc-ch---HHHHHHHHHcCCCcceE
Confidence 47899999999988865 110 000 0112245799999877763 22 223 567
Q ss_pred EecCCCCCccceeeeccCCceeEEEecCchhHHHHHhhcCCeEEEEEcC
Q 009825 87 ILLQELPHLSHLGVRARQEKVVFVTCEDDEKVSDIERLAGKYVRLEASS 135 (524)
Q Consensus 87 i~~~~~~~LSHv~vrAR~~~v~~a~~~d~~~~~~l~~~~g~~V~l~~~~ 135 (524)
|.+...+.|||=++-|| +|.+...+.+..+.| .+|++|++..+.
T Consensus 82 I~~~~~~il~~gaIvA~---iP~v~~~~~~~~~~l--~~Gd~V~vdg~~ 125 (132)
T d2hi6a1 82 INKKTETIIAVGAAMAE---IPLVEVRDEKFFEAV--KTGDRVVVNADE 125 (132)
T ss_dssp EESSCCHHHHHHHHHHT---CCEEECCCTHHHHHC--CTTSEEEEETTT
T ss_pred EEEcCCCccchhhhhcc---CceEEecCchHhhcc--cCCCEEEEECCC
Confidence 77888889999999997 899998876666544 469999987553
No 9
>d1a9xa6 d.142.1.2 (A:677-935) Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains {Escherichia coli [TaxId: 562]}
Probab=33.50 E-value=27 Score=31.33 Aligned_cols=38 Identities=11% Similarity=0.156 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHhhC--CCEEEEEEEECCeEEEEeeec
Q 009825 484 LGQRLCSVGFFLERKFG--CPQDVEGCLVGKDIYAVQTRP 521 (524)
Q Consensus 484 ~~~~La~~a~~lE~~fg--~pqDIEw~i~~~~l~IlQ~RP 521 (524)
+.++|.+.+.+|-+.+| ...-|||+++++++|++.+-|
T Consensus 129 ~~~~l~~~a~kia~~l~~~G~~~vef~v~~~~~y~iEvNp 168 (259)
T d1a9xa6 129 IQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNP 168 (259)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEEEEECSSCEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHhhhccceeEEEEEECCEEEEEEccc
Confidence 45778888888888887 489999999988999999876
No 10
>d1zavu1 a.108.1.1 (U:1-30) Ribosomal protein L7/12, oligomerisation (N-terminal) domain {Thermotoga maritima [TaxId: 2336]}
Probab=30.57 E-value=18 Score=21.07 Aligned_cols=16 Identities=38% Similarity=0.376 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHHHhhC
Q 009825 485 GQRLCSVGFFLERKFG 500 (524)
Q Consensus 485 ~~~La~~a~~lE~~fg 500 (524)
..+|+++.+.+|+.||
T Consensus 15 vaelaelvk~ledkfg 30 (30)
T d1zavu1 15 VSELAELVKKLEDKFG 30 (30)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhhcC
Confidence 5789999999999997
Done!