Query 009838
Match_columns 524
No_of_seqs 233 out of 1649
Neff 4.6
Searched_HMMs 29240
Date Mon Mar 25 14:07:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009838.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009838hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1khd_A Anthranilate phosphorib 100.0 6.4E-70 2.2E-74 560.6 25.9 263 211-512 9-272 (345)
2 4hkm_A Anthranilate phosphorib 100.0 4.9E-69 1.7E-73 553.6 26.9 264 211-512 2-266 (346)
3 1vqu_A Anthranilate phosphorib 100.0 7.9E-69 2.7E-73 557.7 27.3 265 210-512 22-296 (374)
4 1o17_A Anthranilate PRT, anthr 100.0 4.8E-69 1.7E-73 554.0 24.8 260 213-513 1-260 (345)
5 3r88_A Anthranilate phosphorib 100.0 4.1E-68 1.4E-72 552.8 27.9 262 213-513 24-287 (377)
6 2elc_A Trp D, anthranilate pho 100.0 1.5E-67 5.3E-72 539.7 25.1 252 217-512 2-253 (329)
7 2dsj_A Pyrimidine-nucleoside ( 100.0 1.2E-48 4E-53 411.5 21.2 217 213-447 1-236 (423)
8 1brw_A PYNP, protein (pyrimidi 100.0 3.6E-48 1.2E-52 409.1 23.0 215 213-449 1-239 (433)
9 1uou_A Thymidine phosphorylase 100.0 2.4E-47 8E-52 406.4 22.9 214 214-449 29-267 (474)
10 3h5q_A PYNP, pyrimidine-nucleo 100.0 5.5E-47 1.9E-51 400.1 23.4 215 212-448 3-241 (436)
11 2tpt_A Thymidine phosphorylase 100.0 2.7E-46 9.2E-51 395.6 25.3 214 213-448 2-241 (440)
12 1qdl_B Protein (anthranilate s 97.9 2.5E-06 8.5E-11 79.8 1.9 112 98-211 47-180 (195)
13 3r75_A Anthranilate/para-amino 97.8 4.6E-06 1.6E-10 92.3 1.2 120 98-224 488-635 (645)
14 1i1q_B Anthranilate synthase c 97.6 2E-05 7E-10 73.3 2.4 106 100-210 51-173 (192)
15 1a9x_B Carbamoyl phosphate syn 97.4 3E-05 1E-09 81.0 1.4 104 98-211 233-357 (379)
16 1wl8_A GMP synthase [glutamine 97.0 0.00037 1.3E-08 64.3 3.4 106 99-210 46-170 (189)
17 3l7n_A Putative uncharacterize 96.7 0.00035 1.2E-08 67.2 1.2 112 96-209 45-182 (236)
18 2a9v_A GMP synthase; structura 96.5 0.0006 2.1E-08 64.8 1.3 107 99-210 57-183 (212)
19 1o1y_A Conserved hypothetical 96.3 0.0014 4.9E-08 63.3 2.4 110 98-210 59-189 (239)
20 3m3p_A Glutamine amido transfe 96.1 0.0013 4.3E-08 64.7 0.8 110 97-210 49-180 (250)
21 3uow_A GMP synthetase; structu 95.1 0.0043 1.5E-07 67.5 0.3 121 99-221 53-224 (556)
22 2vxo_A GMP synthase [glutamine 94.9 0.0076 2.6E-07 67.4 1.9 120 98-223 74-211 (697)
23 1gpm_A GMP synthetase, XMP ami 94.4 0.011 3.6E-07 63.8 1.4 109 98-212 52-187 (525)
24 2ywb_A GMP synthase [glutamine 94.4 0.0096 3.3E-07 63.7 0.9 126 99-230 45-192 (503)
25 2vpi_A GMP synthase; guanine m 93.8 0.0069 2.4E-07 57.9 -1.4 107 99-211 70-194 (218)
26 2v4u_A CTP synthase 2; pyrimid 93.4 0.04 1.4E-06 54.9 3.2 108 98-210 92-257 (289)
27 2w7t_A CTP synthetase, putativ 93.2 0.1 3.6E-06 51.4 5.8 52 94-150 65-118 (273)
28 1s1m_A CTP synthase; CTP synth 93.1 0.058 2E-06 58.8 4.1 50 98-152 345-396 (545)
29 3tqi_A GMP synthase [glutamine 92.3 0.014 4.9E-07 62.8 -1.8 109 98-211 55-189 (527)
30 1l9x_A Gamma-glutamyl hydrolas 91.3 0.017 5.9E-07 58.2 -2.5 65 94-159 84-154 (315)
31 3fij_A LIN1909 protein; 11172J 89.2 0.23 8E-06 48.1 3.6 92 118-210 97-222 (254)
32 1vco_A CTP synthetase; tetrame 79.9 1.4 4.7E-05 48.2 4.6 54 94-152 353-408 (550)
33 2elc_A Trp D, anthranilate pho 75.4 19 0.00066 36.5 11.3 114 106-240 9-143 (329)
34 4gud_A Imidazole glycerol phos 74.4 0.87 3E-05 42.1 0.9 55 93-152 38-96 (211)
35 1o17_A Anthranilate PRT, anthr 70.8 33 0.0011 35.0 11.8 113 107-240 13-143 (345)
36 3r88_A Anthranilate phosphorib 60.7 8.1 0.00028 40.1 4.9 114 106-240 35-171 (377)
37 4hkm_A Anthranilate phosphorib 59.7 9.7 0.00033 38.9 5.3 49 106-171 15-63 (346)
38 3d54_D Phosphoribosylformylgly 59.0 2 6.7E-05 39.5 -0.0 94 117-211 67-191 (213)
39 1vqu_A Anthranilate phosphorib 56.8 11 0.00039 38.9 5.3 47 107-170 37-83 (374)
40 1khd_A Anthranilate phosphorib 56.1 10 0.00036 38.8 4.8 48 107-171 23-70 (345)
41 3ol3_A Putative uncharacterize 50.6 79 0.0027 27.5 8.7 71 209-284 27-98 (107)
42 1ka9_H Imidazole glycerol phos 50.0 3.3 0.00011 38.1 -0.1 52 99-152 43-111 (200)
43 2ywj_A Glutamine amidotransfer 48.5 3.9 0.00013 37.0 0.2 110 95-209 36-168 (186)
44 3nva_A CTP synthase; rossman f 48.2 14 0.00049 40.2 4.5 53 94-151 348-402 (535)
45 4ex8_A ALNA; alpha/beta/alpha- 48.2 6.3 0.00022 40.3 1.6 165 249-438 61-261 (316)
46 2tpt_A Thymidine phosphorylase 46.9 21 0.00071 37.9 5.4 195 106-327 13-235 (440)
47 1brw_A PYNP, protein (pyrimidi 46.6 19 0.00066 38.1 5.1 131 106-256 12-161 (433)
48 3h5q_A PYNP, pyrimidine-nucleo 45.2 21 0.00073 37.9 5.2 144 107-274 16-180 (436)
49 2dsj_A Pyrimidine-nucleoside ( 43.9 23 0.00077 37.5 5.1 114 104-240 10-145 (423)
50 1gpw_B Amidotransferase HISH; 43.7 6 0.0002 36.2 0.6 46 99-146 45-95 (201)
51 1uou_A Thymidine phosphorylase 43.7 25 0.00084 37.8 5.4 145 106-274 39-205 (474)
52 1j8m_F SRP54, signal recogniti 43.3 2.5E+02 0.0084 27.5 13.3 157 214-382 6-193 (297)
53 2lky_A Uncharacterized protein 42.5 27 0.00091 30.8 4.5 66 211-284 26-91 (112)
54 2ywd_A Glutamine amidotransfer 40.5 4.6 0.00016 36.4 -0.7 112 98-210 41-176 (191)
55 1vma_A Cell division protein F 38.0 1.7E+02 0.006 28.8 10.3 108 215-334 30-142 (306)
56 1zu4_A FTSY; GTPase, signal re 35.9 1.2E+02 0.004 30.3 8.7 110 215-334 18-143 (320)
57 2kvc_A Putative uncharacterize 35.2 40 0.0014 29.2 4.4 67 211-285 24-90 (103)
58 4gim_A Pseudouridine-5'-phosph 33.8 27 0.00094 35.9 3.7 108 267-385 97-220 (335)
59 1ejd_A MURA, EPT, UDP-N-acetyl 33.3 21 0.00073 36.8 2.9 171 257-449 26-218 (419)
60 1vkm_A Conserved hypothetical 32.8 24 0.00082 35.8 3.0 103 268-385 73-190 (297)
61 2ej7_A HCG3 gene; HCG3 protein 30.5 31 0.0011 27.2 2.8 36 338-383 5-40 (82)
62 1vli_A Spore coat polysacchari 29.4 3E+02 0.01 28.7 10.6 153 295-452 29-197 (385)
63 2m0n_A Putative uncharacterize 28.7 1.6E+02 0.0053 25.9 7.1 61 225-285 38-99 (112)
64 2g7r_A Mucosa-associated lymph 26.1 2E+02 0.0068 25.5 7.3 63 213-284 43-107 (117)
65 1rf6_A 5-enolpyruvylshikimate- 26.1 75 0.0026 32.8 5.5 101 255-356 22-138 (427)
66 2px0_A Flagellar biosynthesis 25.4 4.2E+02 0.014 25.7 10.6 130 249-384 51-197 (296)
67 2kn2_A Calmodulin; S MAPK phos 24.5 2.3E+02 0.0078 21.4 7.2 48 215-268 31-78 (92)
68 2v3c_C SRP54, signal recogniti 24.2 5.9E+02 0.02 26.3 11.9 159 214-382 7-193 (432)
69 1q7r_A Predicted amidotransfer 23.8 9.3 0.00032 35.7 -1.8 112 98-212 62-198 (219)
70 2nv0_A Glutamine amidotransfer 22.5 12 0.0004 34.1 -1.3 112 98-212 40-176 (196)
71 2dmx_A DNAJ homolog subfamily 22.4 27 0.00092 28.4 1.0 38 336-383 3-40 (92)
72 2yua_A Williams-beuren syndrom 22.2 52 0.0018 27.2 2.7 35 342-384 15-49 (99)
73 1vc4_A Indole-3-glycerol phosp 22.1 2.4E+02 0.0082 27.1 7.9 112 323-449 44-164 (254)
74 1iur_A KIAA0730 protein; DNAJ 20.8 43 0.0015 27.6 1.9 40 336-383 8-47 (88)
75 2o0b_A 3-phosphoshikimate 1-ca 20.5 1.3E+02 0.0044 31.5 6.0 105 249-356 163-286 (450)
76 1l6x_B Minimized B-domain of p 20.1 2.1E+02 0.0071 20.2 4.9 32 253-284 2-33 (34)
No 1
>1khd_A Anthranilate phosphoribosyltransferase; type 3 PRT fold, nucleotide binding fold; 1.86A {Pectobacterium carotovorum} SCOP: a.46.2.1 c.27.1.1 PDB: 1kgz_A
Probab=100.00 E-value=6.4e-70 Score=560.55 Aligned_cols=263 Identities=17% Similarity=0.244 Sum_probs=239.4
Q ss_pred ccCcHHHHHHHHhcCCCCCHHHHHHHHHHhccCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhCCCCCC
Q 009838 211 REMRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPV 290 (524)
Q Consensus 211 ~~m~l~~~L~kL~~G~~Ls~eEA~~a~~~IL~~~~~~~~G~~s~~QigAFLiaLR~KGET~eELaG~a~Amre~~~~~~~ 290 (524)
.+|+|+++|+|+.+|++||++|++++|+.|| +|+++|.|+||||+|||+||||+|||+||++||++++.+++.
T Consensus 9 ~~~~~~~~i~kl~~g~~Lt~eEa~~~~~~il-------~g~~~~~QiaAfL~alr~kget~eEiag~~~am~~~~~~~~~ 81 (345)
T 1khd_A 9 TIFTHQPILEKLFKSQSMTQEESHQLFAAIV-------RGELEDSQLAAALISMKMRGERPEEIAGAASALLADAQPFPR 81 (345)
T ss_dssp ---CCHHHHHHHHTTCCCCHHHHHHHHHHHT-------TTCSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHTSCCCCC
T ss_pred cccCHHHHHHHHhCCCCCCHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcCCC
Confidence 4577899999999999999999999999999 999999999999999999999999999999999999998876
Q ss_pred CCCCCeeEEcCCCCCCCccccchHHHHHHHhccCCeEEeecCCCCCC-CCCCCHHHHHHhCCCCCCCCHHHHHHHHHhcC
Q 009838 291 ADVKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPP-KGGVTEEQMLKFMGASTNLSVLQAKELLEDEE 369 (524)
Q Consensus 291 ~~~~~vDi~GTGGDG~~tfNiST~laA~VlAa~Gv~VaKHGnRavsS-ksGSt~aDVLEaLGi~i~lspe~a~~~Lee~~ 369 (524)
+....||+|||||||.+||||||+ +|+|+|++|+||+|||||++|| |+|+ +|+||+||++++++++++.++|++
T Consensus 82 ~~~~~vD~~gTGGdg~~tfNiSt~-~A~v~Aa~Gv~VakHGnr~~ss~~~Gs--aDvLeaLGv~~~~~~~~~~~~l~~-- 156 (345)
T 1khd_A 82 PDYDFADIVGTGGDGTNSINISTA-SAFVAASCGAKVAKHGNRSVCQPLAGS--CDLLQAFGIRLDMSAEDSRQALDD-- 156 (345)
T ss_dssp CSSCCEEEEECCCCSSCBCCCHHH-HHHHHHHHTCCEEEEECC-----------CHHHHHTTCCTTCCHHHHHHHHHH--
T ss_pred CCCCeeeecCCCCCCCCccchHHH-HHHHHHhCCCcEEEeCCCCCCCCcccH--HHHHHhCCCCCCCCHHHHHHHHHH--
Confidence 433479999999999999999999 9999999999999999999999 9999 999999999999999999999999
Q ss_pred CcEEEEcccccChhhhhHHhhhcccCCCCccccchhhhhhhhccCCceEEEeccCCcchHHHHHHHHHcCCCEEEEEEcC
Q 009838 370 IGFAYVSLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGE 449 (524)
Q Consensus 370 ~GfaFLfAp~~hPam~~l~pvRk~LGiRTPL~npak~~~~lNPaga~~qViGVfh~~~~~~~A~al~~lG~~~alVV~G~ 449 (524)
.||||+|||.|||+|++++++|++||+||++|..+++ +||+++++||+||||++|.++|+++|+.+|.++++||||
T Consensus 157 ~gi~fl~a~~~hPa~k~l~~~R~~Lg~rTvfn~lgpL---~nPa~~~~~v~GV~~~~~~~~~a~~l~~lG~~~a~vv~G- 232 (345)
T 1khd_A 157 LNVCFLFAPQYHTGFRHAMPVRQQLKTRTIFNVLGPL---INPARPPKALIGVYSPELVLPIAQALKVLGYKNAAVVHG- 232 (345)
T ss_dssp HSEEEEEHHHHCGGGGGGHHHHHHHCSCCTHHHHGGG---CCTTCCSEEEEECSSGGGHHHHHHHHHHTTCSEEEEEEE-
T ss_pred CCEEEEehhhhCHHHHHHHHHHHHhCCCCHHHHHHHh---cCCcCCCeEEEeecCHHHHHHHHHHHHHhCCCeEEEEeC-
Confidence 9999999999999999999999999999999999997 999999999999999999999999999999999999999
Q ss_pred CCceeecCCCcccceEeecccccccCcccccccccccCCCceecEEEEEEecCCCCCCCCCCC
Q 009838 450 EGALSMTTRLRSVNASKGLPVNYCSGFRSLNVESTFEGDGVSRQSFNLEVNASNYGFEPTNTP 512 (524)
Q Consensus 450 eG~DEiS~~~~~~t~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~i~~~~l~P~dfGl~~~~~~ 512 (524)
||+||+|++++ |.+.++ +++ ++++|+|+|+|||++.++..
T Consensus 233 dG~dEis~~~~--t~v~~~-----------------~~g----~i~~~~i~p~~~G~~~~~~~ 272 (345)
T 1khd_A 233 GGMDEVAIHTP--TQVAEL-----------------NNG----EIESYQLSPQDFGLQSYSLN 272 (345)
T ss_dssp TTBSSCCSSSC--EEEEEE-----------------ETT----EEEEEEECGGGGTCCCBCGG
T ss_pred CCcceecCCCc--eEEEEE-----------------eCC----EEEEEEECHHHcCCCcCCcc
Confidence 99999999988 556655 434 59999999999999887764
No 2
>4hkm_A Anthranilate phosphoribosyltransferase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; HET: MSE CXS; 1.95A {Xanthomonas campestris PV}
Probab=100.00 E-value=4.9e-69 Score=553.58 Aligned_cols=264 Identities=20% Similarity=0.276 Sum_probs=233.2
Q ss_pred ccCcHHHHHHHHhcCCCCCHHHHHHHHHHhccCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhCCCCCC
Q 009838 211 REMRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPV 290 (524)
Q Consensus 211 ~~m~l~~~L~kL~~G~~Ls~eEA~~a~~~IL~~~~~~~~G~~s~~QigAFLiaLR~KGET~eELaG~a~Amre~~~~~~~ 290 (524)
+.|.++++|+|+.+|++||+||++++|+.|| +|+++|.|+||||+|+|+||||+|||+||++|||++..++++
T Consensus 2 m~~~~~e~l~~~~~~~~Lt~eEa~~~~~~il-------~G~~~d~QiaAfL~alr~kget~eEi~g~~~am~~~~~~v~~ 74 (346)
T 4hkm_A 2 MPITPQQALQRTIEHREIFHDEMVDLMRQIM-------RGEVSDAMVSAILTGLRVKKETIGEIAGAATVMREFSRRVEV 74 (346)
T ss_dssp -CCCHHHHHHHHHTTCCCCHHHHHHHHHHHH-------TTCSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHSCCCCC
T ss_pred CCCCHHHHHHHHHcCCCCCHHHHHHHHHHHH-------CCCCCHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHhCCCCCC
Confidence 4567899999999999999999999999999 999999999999999999999999999999999999998876
Q ss_pred CC-CCCeeEEcCCCCCCCccccchHHHHHHHhccCCeEEeecCCCCCCCCCCCHHHHHHhCCCCCCCCHHHHHHHHHhcC
Q 009838 291 AD-VKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNLSVLQAKELLEDEE 369 (524)
Q Consensus 291 ~~-~~~vDi~GTGGDG~~tfNiST~laA~VlAa~Gv~VaKHGnRavsSksGSt~aDVLEaLGi~i~lspe~a~~~Lee~~ 369 (524)
++ ...||+|||||||.+||||||+ +|+|+|++|++|+|||||+++||+|+ +|+||+||+++++++++++++|++
T Consensus 75 ~~~~~~vD~~gTGGdg~~t~niSt~-~a~v~Aa~G~~V~khG~r~~ss~~Gs--aD~LeaLG~~~~ls~~~~~~~l~~-- 149 (346)
T 4hkm_A 75 TDRRHMVDIVGTGGDGSHTFNISTC-AMFVAAAGGAKVAKHGNRSVSSKSGS--ADALEALGAVIELQPEQVAASLAQ-- 149 (346)
T ss_dssp SCCTTEEEEECC------CCCHHHH-HHHHHHHTTCEEEEEC---------C--HHHHHTTTCCCCCCHHHHHHHHHH--
T ss_pred CCCccceeecCCCCCCccccCcHHH-HHHHHHhcCCCeeecCCCCCCCCcCH--HHHHHHcCCCcccCHHHHHHHHHh--
Confidence 54 3479999999999999999999 99999999999999999999999999 999999999999999999999999
Q ss_pred CcEEEEcccccChhhhhHHhhhcccCCCCccccchhhhhhhhccCCceEEEeccCCcchHHHHHHHHHcCCCEEEEEEcC
Q 009838 370 IGFAYVSLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGE 449 (524)
Q Consensus 370 ~GfaFLfAp~~hPam~~l~pvRk~LGiRTPL~npak~~~~lNPaga~~qViGVfh~~~~~~~A~al~~lG~~~alVV~G~ 449 (524)
.||||+|||.|||+|++++++|++||+||++|+.+++ +||+++++||+||||++|.++|+++++.+|.++++||||.
T Consensus 150 ~g~~fl~a~~~~Pa~k~l~~~R~~lg~rT~fn~lgpL---~nPa~~~~~v~Gv~~~~~~~~~a~~l~~lg~~~a~vv~g~ 226 (346)
T 4hkm_A 150 TGIGFMYAPVHHPAMKVVAPVRREMGVRTIFNILGPL---TNPAGSPNILMGVFHPDLVGIQARVLQELGAERALVVWGR 226 (346)
T ss_dssp HSEEEECHHHHCGGGGGTHHHHHHHCSCCTHHHHGGG---CCTTCCSEEEEECSSTHHHHHHHHHHHHTTCSEEEEEEET
T ss_pred cCcchhchhhhChhHHHHhhheeccCCCchhhhcccc---cCCCCCcceEeeccCHHHhHHHHHHHHHcCCCeEEEEecC
Confidence 9999999999999999999999999999999999987 9999999999999999999999999999999999999999
Q ss_pred CCceeecCCCcccceEeecccccccCcccccccccccCCCceecEEEEEEecCCCCCCCCCCC
Q 009838 450 EGALSMTTRLRSVNASKGLPVNYCSGFRSLNVESTFEGDGVSRQSFNLEVNASNYGFEPTNTP 512 (524)
Q Consensus 450 eG~DEiS~~~~~~t~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~i~~~~l~P~dfGl~~~~~~ 512 (524)
||+||+|+.++ +.+.++ +++ ++.+|+|+|+||||+..+..
T Consensus 227 ~G~dEis~~~~--t~v~~~-----------------~~g----~i~~~~i~P~d~Gl~~~~~~ 266 (346)
T 4hkm_A 227 DGMDELSLGAG--TLVGEL-----------------RDG----QVHEYEVHPEDFGIAMSASR 266 (346)
T ss_dssp TTBSSCCSSSC--EEEEEE-----------------ETT----EEEEEEECGGGGTCCCCC--
T ss_pred CCchhhhhccC--ceEEEE-----------------eCC----ceeEecCCHHHcCCccCccc
Confidence 99999999888 556555 444 59999999999999887664
No 3
>1vqu_A Anthranilate phosphoribosyltransferase 2; 17130499, structur genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI; 1.85A {Nostoc SP}
Probab=100.00 E-value=7.9e-69 Score=557.68 Aligned_cols=265 Identities=18% Similarity=0.243 Sum_probs=240.6
Q ss_pred CccCcHHHHHHHHhcCCCCCHHHHHHHHHHhccCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhCCCC-
Q 009838 210 PREMRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPP- 288 (524)
Q Consensus 210 ~~~m~l~~~L~kL~~G~~Ls~eEA~~a~~~IL~~~~~~~~G~~s~~QigAFLiaLR~KGET~eELaG~a~Amre~~~~~- 288 (524)
++.|+|+++|+|+.+|++||++|++++|+.|| +|+++|.|+||||+|||+||||+|||+||++||++++.++
T Consensus 22 ~~~~~~~~~i~kl~~G~~Lt~eEa~~~~~~il-------~G~~~~~QiaAfL~Alr~kGet~eEiag~~~am~~~~~~~~ 94 (374)
T 1vqu_A 22 ESSTSWYLLLQQLIDGESLSRSQAAELMQGWL-------SEAVPPELSGAILTALNFKGVSADELTGMAEVLQSQSKMGT 94 (374)
T ss_dssp ---CCTHHHHHHHHTTCCCCHHHHHHHHHHHH-------TTCSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHTTCCC--
T ss_pred CccCCHHHHHHHHhCCCCCCHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCCccc
Confidence 55678999999999999999999999999999 9999999999999999999999999999999999999887
Q ss_pred -------CCCC--CCCeeEEcCCCCCCCccccchHHHHHHHhccCCeEEeecCCCCCCCCCCCHHHHHHhCCCCCCCCHH
Q 009838 289 -------PVAD--VKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNLSVL 359 (524)
Q Consensus 289 -------~~~~--~~~vDi~GTGGDG~~tfNiST~laA~VlAa~Gv~VaKHGnRavsSksGSt~aDVLEaLGi~i~lspe 359 (524)
+++. ...||+|||||||.+||||||+ +|+|+|++|+||+|||||++|||+|+ +|+||+||++++++++
T Consensus 95 ~~~~~~~~~~~~~~~~vD~~gTGGdg~~tfNiSt~-~A~v~Aa~Gv~VaKHGnR~~ss~~Gs--aDvLEaLGv~~~~~~e 171 (374)
T 1vqu_A 95 GENYSQLPITNSPFSIIDTCGTGGDGSSTFNISTA-VAFVAAAYGVPVAKHGNRSASSLTGS--ADVLEALGVNLGASPE 171 (374)
T ss_dssp ---------CCSSSCCEEEEECC---CCBCCHHHH-HHHHHHHTTCCEEEEEECC--CTTCH--HHHHHHTTCCTTCCHH
T ss_pred cccccccCccccCCCeeEEeCCCCCCCCccchHHH-HHHHHHhCCCCEEEECCCCCCCCCCH--HHHHHhCCCCCCCCHH
Confidence 4432 2479999999999999999999 99999999999999999999999999 9999999999999999
Q ss_pred HHHHHHHhcCCcEEEEcccccChhhhhHHhhhcccCCCCccccchhhhhhhhccCCceEEEeccCCcchHHHHHHHHHcC
Q 009838 360 QAKELLEDEEIGFAYVSLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRG 439 (524)
Q Consensus 360 ~a~~~Lee~~~GfaFLfAp~~hPam~~l~pvRk~LGiRTPL~npak~~~~lNPaga~~qViGVfh~~~~~~~A~al~~lG 439 (524)
++.++|++ .||||+|+|.|||+|++++++|++||+||++|..+++ +||+++++||+||||++|.++|+++|+++|
T Consensus 172 ~~~~~l~~--~gi~fl~a~~~hPa~k~l~~~R~~lg~rTvfNilgpL---~NPa~~~~qv~GV~~~~~~~~~a~~l~~lG 246 (374)
T 1vqu_A 172 KVQAALQE--VGITFLFAPGWHPALKAVATLRRTLRIRTVFNLLGPL---VNPLRPTGQVVGLFTPKLLTTVAQALDNLG 246 (374)
T ss_dssp HHHHHHHH--TSEEEEEETTSSGGGGGGHHHHHHHCSCCHHHHHGGG---CCTTCCSEEEEECSCGGGHHHHHHHHHHTT
T ss_pred HHHHHHHH--CCEEEEEhHHhCHHHHHHHHHHHHhCCCCHHHHHHHh---cCCCCCCceEEeecCHHHHHHHHHHHHHcC
Confidence 99999999 9999999999999999999999999999999999987 999999999999999999999999999999
Q ss_pred CCEEEEEEcCCCceeecCCCcccceEeecccccccCcccccccccccCCCceecEEEEEEecCCCCCCCCCCC
Q 009838 440 VHSGLVVKGEEGALSMTTRLRSVNASKGLPVNYCSGFRSLNVESTFEGDGVSRQSFNLEVNASNYGFEPTNTP 512 (524)
Q Consensus 440 ~~~alVV~G~eG~DEiS~~~~~~t~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~i~~~~l~P~dfGl~~~~~~ 512 (524)
.++++||||.||+||+++.++ +.+.++ ++ + ++++|+|+|+|||++.+++.
T Consensus 247 ~~~alVv~G~~G~dE~s~~~~--t~v~~~-----------------~~-g---~~~~~~i~p~d~Gl~~~~~~ 296 (374)
T 1vqu_A 247 KQKAIVLHGRERLDEAGLGDL--TDLAVL-----------------SD-G---ELQLTTINPQEVGVTPAPIG 296 (374)
T ss_dssp CSEEEEEEETTTBSSCCSSSC--EEEEEE-----------------ET-T---EEEEEEECGGGGTCCCCCGG
T ss_pred CCeEEEEECCCCccccccCCc--eEEEEE-----------------eC-C---EEEEEEECHHHCCCcccccc
Confidence 999999999999999999988 556544 33 4 58999999999999887653
No 4
>1o17_A Anthranilate PRT, anthranilate phosphoribosyltransferase, TRPD; nucleoside-phosphorylases; 2.05A {Sulfolobus solfataricus} SCOP: a.46.2.1 c.27.1.1 PDB: 1gxb_A 1zxy_A* 1zyk_A* 2gvq_A* 3gbr_A*
Probab=100.00 E-value=4.8e-69 Score=554.01 Aligned_cols=260 Identities=18% Similarity=0.238 Sum_probs=243.3
Q ss_pred CcHHHHHHHHhcCCCCCHHHHHHHHHHhccCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhCCCCCCCC
Q 009838 213 MRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVAD 292 (524)
Q Consensus 213 m~l~~~L~kL~~G~~Ls~eEA~~a~~~IL~~~~~~~~G~~s~~QigAFLiaLR~KGET~eELaG~a~Amre~~~~~~~~~ 292 (524)
|+|+++|+|+.+|++||++|++++|+.|| +|+++|.|+||||++||+||||+|||+||++||++++.+++++
T Consensus 1 m~~~~~i~k~~~g~~Lt~eEa~~~~~~i~-------~g~~~~~QiaAfL~alr~kget~eEiag~~~am~~~~~~~~~~- 72 (345)
T 1o17_A 1 MNINEILKKLINKSDLEINEAEELAKAII-------RGEVPEILVSAILVALRMKGESKNEIVGFARAMRELAIKIDVP- 72 (345)
T ss_dssp CCHHHHHHHHHTTCCCCHHHHHHHHHHHH-------TTCSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHSCCCCCT-
T ss_pred CCHHHHHHHHHcCCCCCHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCCCCCCC-
Confidence 67899999999999999999999999999 9999999999999999999999999999999999999988664
Q ss_pred CCCeeEEcCCCCCCCccccchHHHHHHHhccCCeEEeecCCCCCCCCCCCHHHHHHhCCCCCCCCHHHHHHHHHhcCCcE
Q 009838 293 VKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNLSVLQAKELLEDEEIGF 372 (524)
Q Consensus 293 ~~~vDi~GTGGDG~~tfNiST~laA~VlAa~Gv~VaKHGnRavsSksGSt~aDVLEaLGi~i~lspe~a~~~Lee~~~Gf 372 (524)
+.||+|||||||.+||||||+ +|+|+|++ +||+|||||++|||+|+ +|+||+||++++++++++.++|++ .||
T Consensus 73 -~~vD~~gTGGdg~~tfNiSt~-~A~v~Aa~-v~VaKHGnR~~ss~~Gs--aDvLEaLGv~~~~~~e~~~~~l~~--~gi 145 (345)
T 1o17_A 73 -NAIDTAGTGGDGLGTVNVSTA-SAILLSLV-NPVAKHGNRAVSGKSGS--ADVLEALGYNIIVPPERAKELVNK--TNF 145 (345)
T ss_dssp -TCEECCC----CCCBCCHHHH-HHHHHTTT-SCEEEEECCCSSSSCSH--HHHHHHHTBCCCCCHHHHHHHHHH--HSE
T ss_pred -CceeeCCCCCCCCCccchHHH-HHHHHHHc-CCEEEECCCCCCCcccH--HHHHHhCCCCCCCCHHHHHHHHHH--cCE
Confidence 479999999999999999999 99999999 99999999999999999 999999999999999999999999 999
Q ss_pred EEEcccccChhhhhHHhhhcccCCCCccccchhhhhhhhccCCceEEEeccCCcchHHHHHHHHHcCCCEEEEEEcCCCc
Q 009838 373 AYVSLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGA 452 (524)
Q Consensus 373 aFLfAp~~hPam~~l~pvRk~LGiRTPL~npak~~~~lNPaga~~qViGVfh~~~~~~~A~al~~lG~~~alVV~G~eG~ 452 (524)
||+|||.|||+|++++++|++||+||++|..+++ +||+++++||+||||+.|.++|+++|+++|.++++||||.+|+
T Consensus 146 ~fl~a~~~hPa~k~l~~~R~~lg~rTvfN~lgpL---~nPa~~~~ql~Gv~~~~~~~~~A~~l~~lG~~~alVv~G~~G~ 222 (345)
T 1o17_A 146 VFLFAQYYHPAMKNVANVRKTLGIRTIFNILGPL---TNPANAKYQLMGVFSKDHLDLLSKSAYELDFNKIILVYGEPGI 222 (345)
T ss_dssp EEEEHHHHCGGGGGTHHHHHHHCSCCGGGGCGGG---CCTTCCSEEEEECSSHHHHHHHHHHHTTSCCSEEEEEEETTTB
T ss_pred EEEehHHhChHHHHHHHHHHHhCCCCHHHHHHHh---cCccCCCeEEEEeeCHHHHHHHHHHHHHcCCCeEEEEECCCCH
Confidence 9999999999999999999999999999999997 9999999999999999999999999999999999999999999
Q ss_pred eeecCCCcccceEeecccccccCcccccccccccCCCceecEEEEEEecCCCCCCCCCCCC
Q 009838 453 LSMTTRLRSVNASKGLPVNYCSGFRSLNVESTFEGDGVSRQSFNLEVNASNYGFEPTNTPR 513 (524)
Q Consensus 453 DEiS~~~~~~t~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~i~~~~l~P~dfGl~~~~~~~ 513 (524)
||+++.++ +.+.+. ++ | ++++|+|+|+||||+++++.+
T Consensus 223 dE~s~~~~--t~v~~~-----------------~~-g---~~~~~~i~p~d~Gl~~~~~~~ 260 (345)
T 1o17_A 223 DEVSPIGN--TFMKIV-----------------SK-R---GIEEVKLNVTDFGISPIPIEK 260 (345)
T ss_dssp SSCCSSSE--EEEEEE-----------------ET-T---EEEEEEEEGGGGTCCCCCGGG
T ss_pred HHhcccCC--cEEEEE-----------------eC-C---eEEEEEEChhhcCCCCCChhc
Confidence 99999988 445544 43 4 589999999999999888654
No 5
>3r88_A Anthranilate phosphoribosyltransferase; anthranilic acids, M tryptophan, inhibitor, magnesium binding phosp pyrophosphate; HET: PRP 14F; 1.73A {Mycobacterium tuberculosis} PDB: 3qqs_A 3qs8_A* 3qsa_A* 3qr9_A* 3r6c_A* 3twp_A* 1zvw_A* 2bpq_A
Probab=100.00 E-value=4.1e-68 Score=552.82 Aligned_cols=262 Identities=17% Similarity=0.197 Sum_probs=247.7
Q ss_pred CcHHHHHHHHhcCCCCCHHHHHHHHHHhccCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhCCCCCCCC
Q 009838 213 MRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVAD 292 (524)
Q Consensus 213 m~l~~~L~kL~~G~~Ls~eEA~~a~~~IL~~~~~~~~G~~s~~QigAFLiaLR~KGET~eELaG~a~Amre~~~~~~~~~ 292 (524)
.+|.++|++|.+|++||++|++++|+.|| +|+++|.|+||||+|||+||||+|||+||++|||+++.+++.+.
T Consensus 24 ~t~~~il~~l~~g~~Ls~eEa~~~~~~i~-------~G~~~~~QiaAfL~Alr~kGet~eEi~g~~~am~~~~~~v~~~~ 96 (377)
T 3r88_A 24 PSWPQILGRLTDNRDLARGQAAWAMDQIM-------TGNARPAQIAAFAVAMTMKAPTADEVGELAGVMLSHAHPLPADT 96 (377)
T ss_dssp CCHHHHHHHHHTTCCCCTTHHHHHHHHHH-------TTCSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHSCCCCTTC
T ss_pred CCHHHHHHHHHCCCCCCHHHHHHHHHHHH-------CCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHhCCcCCCcc
Confidence 36999999999999999999999999999 99999999999999999999999999999999999998887543
Q ss_pred --CCCeeEEcCCCCCCCccccchHHHHHHHhccCCeEEeecCCCCCCCCCCCHHHHHHhCCCCCCCCHHHHHHHHHhcCC
Q 009838 293 --VKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNLSVLQAKELLEDEEI 370 (524)
Q Consensus 293 --~~~vDi~GTGGDG~~tfNiST~laA~VlAa~Gv~VaKHGnRavsSksGSt~aDVLEaLGi~i~lspe~a~~~Lee~~~ 370 (524)
...||+|||||||.+||||||+ +|+|+|++|+||+|||||++|||+|+ +|+||+||+++++++++++++|++ .
T Consensus 97 ~~~~~vD~~gTGGdg~~T~niSt~-~A~v~Aa~Gv~VaKHGnR~~ss~~Gs--aDvLEaLGv~~~l~~e~~~~~l~~--~ 171 (377)
T 3r88_A 97 VPDDAVDVVGTGGDGVNTVNLSTM-AAIVVAAAGVPVVKHGNRAASSLSGG--ADTLEALGVRIDLGPDLVARSLAE--V 171 (377)
T ss_dssp SCTTCEEEEECCCCSCCBCCHHHH-HHHHHHHTTCCEEEEECCCSSSSCCH--HHHHHHTTCCCCCCHHHHHHHHHH--H
T ss_pred CCCCCeEEeCCCCCCcCccccHHH-HHHHHHhcCCeEEeECCCCCCCcccH--HHHHHHcCCCcccchHHHHHHHHH--h
Confidence 3579999999999999999999 99999999999999999999999999 999999999999999999999999 9
Q ss_pred cEEEEcccccChhhhhHHhhhcccCCCCccccchhhhhhhhccCCceEEEeccCCcchHHHHHHHHHcCCCEEEEEEcCC
Q 009838 371 GFAYVSLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEE 450 (524)
Q Consensus 371 GfaFLfAp~~hPam~~l~pvRk~LGiRTPL~npak~~~~lNPaga~~qViGVfh~~~~~~~A~al~~lG~~~alVV~G~e 450 (524)
||||+|||.|||+|++++++|++||+||++|..+++ +||+++++||+||||++|.++|+++++.+| ++++||||.|
T Consensus 172 gi~fl~a~~~hPa~k~l~~vR~~Lg~rTifN~lgpL---~NPa~~~~~liGv~~~~l~~~~a~~l~~~~-~~a~vv~G~d 247 (377)
T 3r88_A 172 GIGFCFAPRFHPSYRHAAAVRREIGVPTVFNLLGPL---TNPARPRAGLIGCAFADLAEVMAGVFAARR-SSVLVVHGDD 247 (377)
T ss_dssp SEEEEEHHHHCGGGHHHHHHHHHHCSCCGGGGHHHH---CCTTCCSEEEEECSCTTTHHHHHHHHHHTT-CEEEEEEETT
T ss_pred ccccccchhhCHHHHHHHHHHHHhccCchhhhHHHh---cCcccccccccCCCCHHHhHHHHHHHHhcC-CeeEEecCCC
Confidence 999999999999999999999999999999999997 999999999999999999999999999998 6999999999
Q ss_pred CceeecCCCcccceEeecccccccCcccccccccccCCCceecEEEEEEecCCCCCCCCCCCC
Q 009838 451 GALSMTTRLRSVNASKGLPVNYCSGFRSLNVESTFEGDGVSRQSFNLEVNASNYGFEPTNTPR 513 (524)
Q Consensus 451 G~DEiS~~~~~~t~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~i~~~~l~P~dfGl~~~~~~~ 513 (524)
|+||+++.++ |.+.++ +++ ++++|+|+|+||||+.+++..
T Consensus 248 GlDEis~~~~--t~v~~~-----------------~~g----~i~~~~i~P~d~Gl~~~~~~~ 287 (377)
T 3r88_A 248 GLDELTTTTT--STIWRV-----------------AAG----SVDKLTFDPAGFGFARAQLDQ 287 (377)
T ss_dssp SCSSCCSSSC--EEEEEE-----------------ETT----EEEEEEECGGGGTCCCCCGGG
T ss_pred CCceeecccc--cceEEE-----------------eec----eeEEEeccccccCCCcCCHHh
Confidence 9999999988 556555 444 599999999999999887754
No 6
>2elc_A Trp D, anthranilate phosphoribosyltransferase; structural genomics, NPPSFA, national project O structural and functional analyses; 1.55A {Thermus thermophilus} SCOP: a.46.2.1 c.27.1.1 PDB: 1v8g_A
Probab=100.00 E-value=1.5e-67 Score=539.71 Aligned_cols=252 Identities=23% Similarity=0.328 Sum_probs=237.3
Q ss_pred HHHHHHhcCCCCCHHHHHHHHHHhccCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhCCCCCCCCCCCe
Q 009838 217 GALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVADVKSL 296 (524)
Q Consensus 217 ~~L~kL~~G~~Ls~eEA~~a~~~IL~~~~~~~~G~~s~~QigAFLiaLR~KGET~eELaG~a~Amre~~~~~~~~~~~~v 296 (524)
++|+|+.+|++||++|++++|+.|| +|+++|.|+||||++||+||||+|||+||++|||+++.+++++..+.|
T Consensus 2 ~~l~k~~~g~~Lt~eEa~~~~~~i~-------~g~~~~~QiaAfL~alr~kget~~Eiag~~~am~~~~~~~~~~~~~~v 74 (329)
T 2elc_A 2 DAVKKAILGEVLEEEEAYEVMRALM-------AGEVSPVRAAGLLVALSLRGERPHEIAAMARAMREAARPLRVHRRPLL 74 (329)
T ss_dssp CHHHHHHTTCCCCHHHHHHHHHHHH-------TTCSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHSCCCCCCCSSEE
T ss_pred hHHHHHhcCCCCCHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCCCCCCCCCCee
Confidence 4789999999999999999999999 999999999999999999999999999999999999998876423579
Q ss_pred eEEcCCCCCCCccccchHHHHHHHhccCCeEEeecCCCCCCCCCCCHHHHHHhCCCCCCCCHHHHHHHHHhcCCcEEEEc
Q 009838 297 THYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNLSVLQAKELLEDEEIGFAYVS 376 (524)
Q Consensus 297 Di~GTGGDG~~tfNiST~laA~VlAa~Gv~VaKHGnRavsSksGSt~aDVLEaLGi~i~lspe~a~~~Lee~~~GfaFLf 376 (524)
|+|||||||.+||||||+ +|+|+|++|+||+|||||++|||+|+ +|+||+||++++++++++.++|++ .||||+|
T Consensus 75 D~~gTGGdg~~tfNiSt~-~a~v~Aa~Gv~V~kHGnr~~ss~~Gs--aDvLeaLG~~~~~~~~~~~~~l~~--~g~~fl~ 149 (329)
T 2elc_A 75 DIVGTGGDGKGLMNLSTL-AALVAAAGGVAVAKHGNRAASSRAGS--ADLLEALGVDLEAPPERVGEAIEE--LGFGFLF 149 (329)
T ss_dssp EEEECCCCSSCCCCCHHH-HHHHHHHTTCEEEEEECCCTTTTCSH--HHHHHHTTCCTTCCHHHHHHHHHH--HSEEEEE
T ss_pred EEcCCCCCCCCccccHHH-HHHHHHhCCCCEEEeCCCCCCCcccH--HHHHHhCCCCCCCCHHHHHHHHHH--CCEEEEE
Confidence 999999999999999999 99999999999999999999999999 999999999999999999999999 9999999
Q ss_pred ccccChhhhhHHhhhcccCCCCccccchhhhhhhhccCCceEEEeccCCcchHHHHHHHHHcCCCEEEEEEcCCCceeec
Q 009838 377 LREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRRGVHSGLVVKGEEGALSMT 456 (524)
Q Consensus 377 Ap~~hPam~~l~pvRk~LGiRTPL~npak~~~~lNPaga~~qViGVfh~~~~~~~A~al~~lG~~~alVV~G~eG~DEiS 456 (524)
||.|||+|++++++|++||+||++|..+++ +||+++++||+||||+.|.++|+++|+.+| ++++|||| ||+||++
T Consensus 150 a~~~hPa~k~~~~~R~~lg~rTvfn~lgpL---~nPa~~~~~v~Gv~~~~~~~~~a~~l~~lG-~~alVv~G-~G~dE~~ 224 (329)
T 2elc_A 150 ARVFHPAMRHVAPVRAELGVRTVFNLLGPL---TNPAGADAYVLGVFSPEWLAPMAEALERLG-ARGLVVHG-EGADELV 224 (329)
T ss_dssp HHHHCGGGGGTHHHHHHHCSCCHHHHHTTT---CCTTCCCEEEEECSSGGGHHHHHHHHHHTT-CEEEEEEE-TTBSSCC
T ss_pred hHHhCHHHHHHHHHHHHhCCCCHHHHHHHh---cCccCCceeEEeeeCHHHHHHHHHHHHHcC-CCEEEEeC-CChhhhc
Confidence 999999999999999999999999999987 999999999999999999999999999999 99999999 9999999
Q ss_pred CCCcccceEeecccccccCcccccccccccCCCceecEEEEEEecCCCCCCCCCCC
Q 009838 457 TRLRSVNASKGLPVNYCSGFRSLNVESTFEGDGVSRQSFNLEVNASNYGFEPTNTP 512 (524)
Q Consensus 457 ~~~~~~t~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~i~~~~l~P~dfGl~~~~~~ 512 (524)
.++ +.+.+. + ++ . |+++|+|||++.+++.
T Consensus 225 -~~~--t~v~~~-----------------~-~g-----~-~~i~p~~~G~~~~~~~ 253 (329)
T 2elc_A 225 -LGE--NRVVEV-----------------G-KG-----A-YALTPEEVGLKRAPLE 253 (329)
T ss_dssp -SSC--EEEEET-----------------T-TE-----E-EEECGGGGTCCCCCGG
T ss_pred -cCC--eEEEEE-----------------E-CC-----E-EEECHHHcCCccCCcc
Confidence 877 556544 3 44 2 9999999999987764
No 7
>2dsj_A Pyrimidine-nucleoside (thymidine) phosphorylase; pyrimidine-nucleoside phosphorylase, structural genomics; 1.80A {Thermus thermophilus}
Probab=100.00 E-value=1.2e-48 Score=411.49 Aligned_cols=217 Identities=16% Similarity=0.141 Sum_probs=200.1
Q ss_pred CcHHHHHHHHhcCCCCCHHHHHHHHHHhccCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhCCCCCCCC
Q 009838 213 MRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVAD 292 (524)
Q Consensus 213 m~l~~~L~kL~~G~~Ls~eEA~~a~~~IL~~~~~~~~G~~s~~QigAFLiaLR~KGET~eELaG~a~Amre~~~~~~~~~ 292 (524)
|+|+++|+|+..|++||++|++++|+.|| +|+++|.|+||||+|+|+||||.|||+||++||+++..+++++.
T Consensus 1 m~~~~~i~k~~~g~~Lt~eEa~~~~~~i~-------~G~~~d~QiaAfL~Al~~kGet~eEiag~a~aM~~~~~~l~~~~ 73 (423)
T 2dsj_A 1 MNPVAFIREKREGKKHRREDLEAFLLGYL-------RDEVPDYQVSAWLMAAFLRGLDPEETLWLTETMARSGKVLDLSG 73 (423)
T ss_dssp CCHHHHHHHHHTTCCCCHHHHHHHHHHHH-------TTCSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHTSSBCCCCTT
T ss_pred CCHHHHHHHHhcCCCCCHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcCCccc
Confidence 57899999999999999999999999999 99999999999999999999999999999999999998887653
Q ss_pred C-CCeeEEcCCCCCCCccccchHHHHHHHhccCCeEEeecCCCCCCCCCCCHHHHHHhC-CCCCCCCHHHHHHHHHhcCC
Q 009838 293 V-KSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFM-GASTNLSVLQAKELLEDEEI 370 (524)
Q Consensus 293 ~-~~vDi~GTGGDG~~tfNiST~laA~VlAa~Gv~VaKHGnRavsSksGSt~aDVLEaL-Gi~i~lspe~a~~~Lee~~~ 370 (524)
. ..+|+|||||||. |+||+ +|+|+|+||++|+|||||++||++|+ +|+||+| |++++++++++.+++++ +
T Consensus 74 ~~~~vD~~gTGGdG~---niSt~-~a~vvAa~Gv~VaKhGnR~~ss~~Gs--aDvLEaL~Gv~i~l~~e~~~~~l~~--~ 145 (423)
T 2dsj_A 74 LPHPVDKHSSGGVGD---KVSLV-VGPILAASGCTFAKMSGRGLAHTGGT--IDKLESVPGWRGEMTEAEFLERARR--V 145 (423)
T ss_dssp SSSBEEEEEESSSCC---STHHH-HHHHHHTTTCBEEEECCCCBTTBCCH--HHHHTTSTTCCCCCCHHHHHHHHHH--T
T ss_pred cCCceeEecCCCCCc---cHHHH-HHHHHHhCCCcEEEECCCCCCCCccH--HHHHHhCCCCCCCCCHHHHHHHHHH--c
Confidence 1 2799999999998 79999 99999999999999999999999999 9999999 99999999999999999 9
Q ss_pred cEEEEcc-cccChhhhhHHhhhcccC-CCCccccchhhhhhhh---ccCCceEEE------ecc--CCcchHHHHHHHHH
Q 009838 371 GFAYVSL-REARPSLYSLIGLREHIK-KRPPVATSEKVQQFVR---AQGREAIVA------GFY--HEGYEEPLLMLMKR 437 (524)
Q Consensus 371 GfaFLfA-p~~hPam~~l~pvRk~LG-iRTPL~npak~~~~lN---Paga~~qVi------GVf--h~~~~~~~A~al~~ 437 (524)
||||+++ +.|||+|+++.++|++|| +||.++-.+++ +| |+++++||+ |+| ++++.++++++|..
T Consensus 146 Gi~f~~~~~~~~PA~k~l~~lR~~lgtv~Ti~nilgpl---~nkK~pag~~~~vldV~~G~Gaf~~~~~~~~~lA~~l~~ 222 (423)
T 2dsj_A 146 GLVIAAQSPDLAPLDGKLYALRDVTATVESVPLIASSI---MSKKLAAGARSIVLDVKVGRGAFMKTLEEARLLAKTMVA 222 (423)
T ss_dssp SEEEESCGGGBSHHHHHHHHHHHTTTCCCCHHHHHHHH---HHHHHHHTCSEEEEEEEESSSTTCBCHHHHHHHHHHHHH
T ss_pred CEEEEecccccChHHHHHHHHHHHhcccCcHHHhHHHH---hcCccCCCCCeEEEEeccCCCcccCCHHHHHHHHHHHHH
Confidence 9999877 799999999999999999 89977777777 66 899999999 779 88999999999988
Q ss_pred cCCC----EEEEEE
Q 009838 438 RGVH----SGLVVK 447 (524)
Q Consensus 438 lG~~----~alVV~ 447 (524)
+|.+ .+.+++
T Consensus 223 lg~~~G~~~v~~l~ 236 (423)
T 2dsj_A 223 IGQGAGRRVRALLT 236 (423)
T ss_dssp HHHHTTCEEEEEEE
T ss_pred HHHHcCCeEEEEEc
Confidence 7643 444554
No 8
>1brw_A PYNP, protein (pyrimidine nucleoside phosphorylase); domain movement, transferase; HET: MES; 2.10A {Geobacillus stearothermophilus} SCOP: a.46.2.1 c.27.1.1 d.41.3.1
Probab=100.00 E-value=3.6e-48 Score=409.13 Aligned_cols=215 Identities=17% Similarity=0.207 Sum_probs=201.0
Q ss_pred CcHHHHHHHHhcCCCCCHHHHHHHHHHhccCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhCCCCCCCC
Q 009838 213 MRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVAD 292 (524)
Q Consensus 213 m~l~~~L~kL~~G~~Ls~eEA~~a~~~IL~~~~~~~~G~~s~~QigAFLiaLR~KGET~eELaG~a~Amre~~~~~~~~~ 292 (524)
|+|+++|+|+.+|++||++|++++|+.|| +|+++|.|+||||+|+|+||||.|||+||++||+++..+++++.
T Consensus 1 m~~~~~i~k~~~g~~Lt~eEa~~~~~~i~-------~G~~sd~QiaAfL~Alr~kGet~eEiag~a~AM~~~~~~v~~~~ 73 (433)
T 1brw_A 1 MRMVDLIAKKRDGKALTKEEIEWIVRGYT-------NGDIPDYQMSALAMAIYFRGMTEEETAALTMAMVQSGEMLDLSS 73 (433)
T ss_dssp CCHHHHHHHHHTTCCCCHHHHHHHHHHHH-------TTSSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHTSCCCCCTT
T ss_pred CCHHHHHHHHhcCCCCCHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcCCccc
Confidence 67899999999999999999999999999 99999999999999999999999999999999999999887653
Q ss_pred --CCCeeEEcCCCCCCCccccchHHHHHHHhccCCeEEeecCCCCCCCCCCCHHHHHHhC-CCCCCCCHHHHHHHHHhcC
Q 009838 293 --VKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFM-GASTNLSVLQAKELLEDEE 369 (524)
Q Consensus 293 --~~~vDi~GTGGDG~~tfNiST~laA~VlAa~Gv~VaKHGnRavsSksGSt~aDVLEaL-Gi~i~lspe~a~~~Lee~~ 369 (524)
...+|+|||||||.+ +||+ +|+|+|+||++|+|||||++||++|+ +|+||+| |++++++++++.+++++
T Consensus 74 ~~~~~vD~~gTGGdG~~---iSt~-~A~vvAa~Gv~VaKHGnRa~ss~~Gs--aDvLEaL~Gv~i~ls~e~~~~~l~~-- 145 (433)
T 1brw_A 74 IRGVKVDKHSTGGVGDT---TTLV-LGPLVASVGVPVAKMSGRGLGHTGGT--IDKLESVPGFHVEISKDEFIRLVNE-- 145 (433)
T ss_dssp SCSCCEEEEECCCSSCC---HHHH-HHHHHHTTTCCEEEEECCCBTTBCCH--HHHHTTSTTCCCCCCHHHHHHHHHH--
T ss_pred ccCCceeeCCCCCCCcc---hHHH-HHHHHHhCCCcEEEECCCCCCCCCCH--HHHHHHCcCceecCCHHHHHHHHHH--
Confidence 247999999999986 7888 99999999999999999999999999 9999999 99999999999999999
Q ss_pred CcEEEEcc-cccChhhhhHHhhhcccCCCCccccchhhhhhhhc--------cCCceEEEec------c------CCcch
Q 009838 370 IGFAYVSL-REARPSLYSLIGLREHIKKRPPVATSEKVQQFVRA--------QGREAIVAGF------Y------HEGYE 428 (524)
Q Consensus 370 ~GfaFLfA-p~~hPam~~l~pvRk~LGiRTPL~npak~~~~lNP--------aga~~qViGV------f------h~~~~ 428 (524)
.||||+|| |.|||+|+++.++|++| ||.+|. ++ +|| .+++++|+|| | ++.+.
T Consensus 146 ~Gi~fl~a~~~~hPA~k~l~~lR~~l--rTvfNi--PL---in~s~lskklA~G~~~~VlgVk~G~gaf~~~~de~~~l~ 218 (433)
T 1brw_A 146 NGIAIIGQTGDLTPADKKLYALRDVT--ATVNSI--PL---IASSIMSKKIAAGADAIVLDVKTGAGAFMKKLDEARRLA 218 (433)
T ss_dssp HSEEEEECCTTSCHHHHHHHHHHHHH--TCCCCH--HH---HHHHHHHHHHHHCCSEEEEEEEESTTSSCCSHHHHHHHH
T ss_pred cCeeEecCchhhCHHHHHHHHHHHhh--CCccCh--hh---cCcHhhHHHHhcCCCEEEEEeecccccccCCHHHHHHHH
Confidence 99999999 59999999999999999 897776 33 777 6889999999 8 88889
Q ss_pred HHHHHHHHHcCCCEEEEEEcC
Q 009838 429 EPLLMLMKRRGVHSGLVVKGE 449 (524)
Q Consensus 429 ~~~A~al~~lG~~~alVV~G~ 449 (524)
+.|.++++.+|.++.++|++.
T Consensus 219 ~~~v~~~~~~G~~~~~~i~~~ 239 (433)
T 1brw_A 219 RVMVDIGKRVGRRTMAVISDM 239 (433)
T ss_dssp HHHHHHHHHTTCEEEEEEEEC
T ss_pred HHHHHHHHHcCCEEEEEEcCC
Confidence 999999999999999999963
No 9
>1uou_A Thymidine phosphorylase; transferase, glycosyltransferase, chemotaxis, angiogenesis; HET: CMU; 2.11A {Homo sapiens} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 2wk6_A 2wk5_A 2j0f_A
Probab=100.00 E-value=2.4e-47 Score=406.41 Aligned_cols=214 Identities=16% Similarity=0.175 Sum_probs=200.2
Q ss_pred cHHHHHHHHhcCCCCCHHHHHHHHHHhccCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhCCCCCCCCC
Q 009838 214 RLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVADV 293 (524)
Q Consensus 214 ~l~~~L~kL~~G~~Ls~eEA~~a~~~IL~~~~~~~~G~~s~~QigAFLiaLR~KGET~eELaG~a~Amre~~~~~~~~~~ 293 (524)
+|+++|+|+..|++||++|++++|+.|| +|+++|.|+||||+|+|+||||.|||+||++||+++..+++++..
T Consensus 29 ~~~~iI~k~~~g~~Lt~eEa~~~~~~i~-------~G~~sd~QiaAfLmAlr~kGeT~eEiag~a~AMr~~~~~v~~~~~ 101 (474)
T 1uou_A 29 QLPELIRMKRDGGRLSEADIRGFVAAVV-------NGSAQGAQIGAMLMAIRLRGMDLEETSVLTQALAQSGQQLEWPEA 101 (474)
T ss_dssp CHHHHHHHHHTTCCCCHHHHHHHHHHHH-------HTCSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHTTSCCCCCCGG
T ss_pred HHHHHHHHHhcCCCCCHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcCCcccc
Confidence 4899999999999999999999999999 999999999999999999999999999999999999998876531
Q ss_pred ---CCeeEEcCCCCCCCccccchHHHHHHHhccCCeEEeecCCCCCCCCCCCHHHHHHhC-CCCCCCCHHHHHHHHHhcC
Q 009838 294 ---KSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFM-GASTNLSVLQAKELLEDEE 369 (524)
Q Consensus 294 ---~~vDi~GTGGDG~~tfNiST~laA~VlAa~Gv~VaKHGnRavsSksGSt~aDVLEaL-Gi~i~lspe~a~~~Lee~~ 369 (524)
..||+|||||||.+ +||+ +|+|+|+||++|+|||||++||++|+ +|+||+| |++++++++++.+++++
T Consensus 102 ~~~~~vD~~gTGGdG~~---iSt~-~A~vvAa~Gv~VaKHGnRa~ss~~GS--aDvLEaLpGv~i~ls~e~~~~~l~~-- 173 (474)
T 1uou_A 102 WRQQLVDKHSTGGVGDK---VSLV-LAPALAACGCKVPMISGRGLGHTGGT--LDKLESIPGFNVIQSPEQMQVLLDQ-- 173 (474)
T ss_dssp GGGGBEEEEESCCTTCC---HHHH-HHHHHHTTTCBEEEECCCCBTTBCCH--HHHHTTSTTCCCCCCHHHHHHHHHH--
T ss_pred cCCCeeEeCCCCCCCce---eHHH-HHHHHHhCCCCEEEECCCCCCCCCCH--HHHHHhCCCCCCCCCHHHHHHHHHH--
Confidence 47999999999997 8888 99999999999999999999999999 9999999 99999999999999999
Q ss_pred CcEEEEcc-cccChhhhhHHhhhcccCCCCccccchhhhhhhhc--------cCCceEEEec------c------CCcch
Q 009838 370 IGFAYVSL-REARPSLYSLIGLREHIKKRPPVATSEKVQQFVRA--------QGREAIVAGF------Y------HEGYE 428 (524)
Q Consensus 370 ~GfaFLfA-p~~hPam~~l~pvRk~LGiRTPL~npak~~~~lNP--------aga~~qViGV------f------h~~~~ 428 (524)
+||||+|| |.|||+|+++.++|+++ ||.+|. ++ +|| .+.+++|+|| | ++.+.
T Consensus 174 ~Gi~fl~a~~~~hPA~k~l~~lR~~l--rTvfNi--PL---inpsi~skklA~g~~~~VlgVk~G~gafm~~lde~~~la 246 (474)
T 1uou_A 174 AGCCIVGQSEQLVPADGILYAARDVT--ATVDSL--PL---ITASILSKKLVEGLSALVVDVKFGGAAVFPNQEQARELA 246 (474)
T ss_dssp HSEEEECCCSSSSHHHHHHHHHHHHT--TCSSCH--HH---HHHHHHHHHHHTTCSEEEEEEEEC--CCCCSHHHHHHHH
T ss_pred cCeEEecCchhhCHHHHHHHHHHhhh--CCccch--hh---cCcHHHHHHHhhcCCeEEEEeccccccccCCHHHHHHHH
Confidence 99999999 69999999999999995 897777 33 777 7889999999 8 78888
Q ss_pred HHHHHHHHHcCCCEEEEEEcC
Q 009838 429 EPLLMLMKRRGVHSGLVVKGE 449 (524)
Q Consensus 429 ~~~A~al~~lG~~~alVV~G~ 449 (524)
+.|..+++.+|.++.++|++.
T Consensus 247 ~~~v~~~~~~G~~~~~vitd~ 267 (474)
T 1uou_A 247 KTLVGVGASLGLRVAAALTAM 267 (474)
T ss_dssp HHHHHHHHHTTCCEEEEEEEC
T ss_pred HHHHHHHHHCCCEEEEEEecC
Confidence 899999999999999999974
No 10
>3h5q_A PYNP, pyrimidine-nucleoside phosphorylase; structural genomics, glycosyltransferase, transferase; HET: MSE THM; 1.94A {Staphylococcus aureus}
Probab=100.00 E-value=5.5e-47 Score=400.09 Aligned_cols=215 Identities=17% Similarity=0.169 Sum_probs=198.8
Q ss_pred cCcHHHHHHHHhcCCCCCHHHHHHHHHHhccCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhCCCCCCC
Q 009838 212 EMRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVA 291 (524)
Q Consensus 212 ~m~l~~~L~kL~~G~~Ls~eEA~~a~~~IL~~~~~~~~G~~s~~QigAFLiaLR~KGET~eELaG~a~Amre~~~~~~~~ 291 (524)
.|+|+++|+|+.+|++||++|++++|+.|| +|+++|.|+||||+++|+||||+|||+||++||+++..+++++
T Consensus 3 ~m~~~~~I~kl~~g~~Lt~eEa~~~~~~i~-------~G~~sd~QiaAfL~Alr~kGet~eEiag~~~Am~~~~~~~~~~ 75 (436)
T 3h5q_A 3 AMRMIDIIEKKRDGHTLTTEEINFFIGGYV-------KGDIPDYQASSLAMAIYFQDMNDDERVALTMAMVNSGDMIDLS 75 (436)
T ss_dssp HHHHHHHHHHHHTTCCCCHHHHHHHHHHHH-------HTSSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHTTSCCCCCT
T ss_pred CCCHHHHHHHHHcCCCCCHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCcCCcc
Confidence 377999999999999999999999999999 9999999999999999999999999999999999999888765
Q ss_pred C--CCCeeEEcCCCCCCCccccchHHHHHHHhccCCeEEeecCCCCCCCCCCCHHHHHHhC-CCCCCCCHHHHHHHHHhc
Q 009838 292 D--VKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFM-GASTNLSVLQAKELLEDE 368 (524)
Q Consensus 292 ~--~~~vDi~GTGGDG~~tfNiST~laA~VlAa~Gv~VaKHGnRavsSksGSt~aDVLEaL-Gi~i~lspe~a~~~Lee~ 368 (524)
. ...||+|||||||.+| ||+ +|+|+|++|++|+|||||++||++|+ +|+||+| |++++++++++.++|++
T Consensus 76 ~~~~~~vD~~gTGGdG~~t---St~-~A~vvAa~Gv~VaKHGnRa~ss~~Gs--aDvLEaLpGi~~~ls~e~~~~~l~~- 148 (436)
T 3h5q_A 76 DIKGVKVDKHSTGGVGDTT---TLV-LAPLVAAVDVPVAKMSGRGLGHTGGT--IDKLEAIDGFHVEIDEATFVKLVNE- 148 (436)
T ss_dssp TSCSCCEEEEECCCTTCCH---HHH-HHHHHHHTTCCEEEECCCCSSSSCCH--HHHHTTSTTCCCCCCHHHHHHHHHH-
T ss_pred ccCCCceeecCCCCCCCCh---HHH-HHHHHHhCCCCEEeECCCCCCCcccH--HHHHHhCcCCCCCCCHHHHHHHHHH-
Confidence 2 3579999999999987 777 99999999999999999999999999 9999999 99999999999999999
Q ss_pred CCcEEEEc-ccccChhhhhHHhhhcccCCCCccccchhhhhhhh--------ccCCceEEEecc--------CCcchHHH
Q 009838 369 EIGFAYVS-LREARPSLYSLIGLREHIKKRPPVATSEKVQQFVR--------AQGREAIVAGFY--------HEGYEEPL 431 (524)
Q Consensus 369 ~~GfaFLf-Ap~~hPam~~l~pvRk~LGiRTPL~npak~~~~lN--------Paga~~qViGVf--------h~~~~~~~ 431 (524)
.||+|++ +|.|||+|+++.++|++ +||.+|. ++ +| |++++++|+||| ++++.+.|
T Consensus 149 -~g~~fl~~a~~~~Pa~~~l~~lR~~--~~Tvfni--PL---inaSimSKKlpag~~~~vlgV~~G~gaf~~~~~~a~~l 220 (436)
T 3h5q_A 149 -NKVAVVGQSGNLTPADKKLYALRDV--TGTVNSI--PL---IASSIMSKKIAAGADAIVLDVKTGSGAFMKTLEDAEAL 220 (436)
T ss_dssp -HSEEEECCCSSSCHHHHHHHHHHHT--TTCSSCH--HH---HHHHHHHHHHHTTCSEEEEEEEESTTSSBCSHHHHHHH
T ss_pred -cCCEEEccccccCHHHHHHHHHHhc--cCCcCCh--hh---hccchhccccccCCCeEEEeeecCccccCCCHHHHHHH
Confidence 9999998 79999999999999999 6896655 43 88 999999999999 99999999
Q ss_pred HHHHHHcC----CCEEEEEEc
Q 009838 432 LMLMKRRG----VHSGLVVKG 448 (524)
Q Consensus 432 A~al~~lG----~~~alVV~G 448 (524)
+++|..+| ...++++++
T Consensus 221 A~~l~~lG~~~G~~~v~~lt~ 241 (436)
T 3h5q_A 221 AHAMVRIGNNVGRNTMAIISD 241 (436)
T ss_dssp HHHHHHHHHHHTCCEEEEEEE
T ss_pred HHHHHHhhhhcCCeEEEEEcC
Confidence 99998865 456777775
No 11
>2tpt_A Thymidine phosphorylase; transferase, salvage pathway; 2.60A {Escherichia coli} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 1azy_A 1tpt_A 1otp_A
Probab=100.00 E-value=2.7e-46 Score=395.57 Aligned_cols=214 Identities=15% Similarity=0.178 Sum_probs=193.7
Q ss_pred CcHHHHHHHHhcCCCCCHHHHHHHHHHhccCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhCCCCCCCC
Q 009838 213 MRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVAD 292 (524)
Q Consensus 213 m~l~~~L~kL~~G~~Ls~eEA~~a~~~IL~~~~~~~~G~~s~~QigAFLiaLR~KGET~eELaG~a~Amre~~~~~~~~~ 292 (524)
|+|+++|+|+.+|++||++|++++|+.|| +|+++|.|+||||+|+|+||||.|||+||++||+++..+++++.
T Consensus 2 m~~~~~i~k~~~g~~Lt~eEa~~~~~~i~-------~G~~sd~QiaAfL~Alr~kGet~eEiag~~~Am~~~~~~~~~~~ 74 (440)
T 2tpt_A 2 FLAQEIIRKKRDGHALSDEEIRFFINGIR-------DNTISEGQIAALAMTIFFHDMTMPERVSLTMAMRDSGTVLDWKS 74 (440)
T ss_dssp CCHHHHHHHHHTTCCCCHHHHHHHHHHHH-------HTCSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHTSBCCCCTT
T ss_pred CCHHHHHHHHhcCCCCCHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCcCCCcc
Confidence 67999999999999999999999999999 99999999999999999999999999999999999999887653
Q ss_pred ----CCCeeEEcCCCCCCCccccchHHHHHHHhccCCeEEeecCCCCCCCCCCCHHHHHHhC-CCCCCCCHHHHHHHHHh
Q 009838 293 ----VKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFM-GASTNLSVLQAKELLED 367 (524)
Q Consensus 293 ----~~~vDi~GTGGDG~~tfNiST~laA~VlAa~Gv~VaKHGnRavsSksGSt~aDVLEaL-Gi~i~lspe~a~~~Lee 367 (524)
.+.||+|||||||.+ +||+ +|+|+|++|++|+|||||++||++|+ +|+||+| |++++++++++.+++++
T Consensus 75 ~~~~~~~vD~~gTGGdG~~---iSt~-~A~vvAa~Gv~VaKHGnR~~ss~~Gs--aDvLEaL~Gv~~~ls~e~~~~~l~~ 148 (440)
T 2tpt_A 75 LHLNGPIVDKHSTGGVGDV---TSLM-LGPMVAACGGYIPMISGRGLGHTGGT--LDKLESIPGFDIFPDDNRFREIIKD 148 (440)
T ss_dssp TTCSSCBEEEEECCCSSCC---HHHH-HHHHHHHTTCBEEEEECCCCTTSCCH--HHHHTTSTTCCSCCCHHHHHHHHHH
T ss_pred cccCCCeeeeCCCCCCCcc---HHHH-HHHHHHhCCCcEEEECCCCCCCcccH--HHHHHhCcCCCCCCCHHHHHHHHHH
Confidence 148999999999987 7888 99999999999999999999999999 9999999 99999999999999999
Q ss_pred cCCcEEEEcc-cccChhhhhHHhhhcccCCCCccccchhhhhhhhc--------cCCceEEEec------cCCcchHH--
Q 009838 368 EEIGFAYVSL-REARPSLYSLIGLREHIKKRPPVATSEKVQQFVRA--------QGREAIVAGF------YHEGYEEP-- 430 (524)
Q Consensus 368 ~~~GfaFLfA-p~~hPam~~l~pvRk~LGiRTPL~npak~~~~lNP--------aga~~qViGV------fh~~~~~~-- 430 (524)
+||||+|| |.|||+|+++.++|++| ||.+|. ++ +|| .+++++|+|| |++.+.+.
T Consensus 149 --~G~~fl~a~~~~hPA~k~l~~lR~~l--rTvfNi--PL---in~s~lskk~A~G~~alVvdVk~G~gaf~~~~de~~~ 219 (440)
T 2tpt_A 149 --VGVAIIGQTSSLAPADKRFYATRDIT--ATVDSI--PL---ITASILAKKLAEGLDALVMDVKVGSGAFMPTYELSEA 219 (440)
T ss_dssp --TSEEEEECCTTBSHHHHHHHHHHHHT--TCCCCH--HH---HHHHHHHHHHTTCCSEEEEEEEESTTSSSSSHHHHHH
T ss_pred --cCEEEEcCchhhCHHHHHHHHHHHhh--CCccCh--hh---cCCHHHHHHHhcCCCeEEEEeccCCccccCCHHHHHH
Confidence 99999999 79999999999999999 897766 33 666 7889999999 44444443
Q ss_pred ----HHHHHHHcCCCEEEEEEc
Q 009838 431 ----LLMLMKRRGVHSGLVVKG 448 (524)
Q Consensus 431 ----~A~al~~lG~~~alVV~G 448 (524)
+......+|.++..++++
T Consensus 220 la~t~v~~~~~~G~~~~a~itd 241 (440)
T 2tpt_A 220 LAEAIVGVANGAGVRTTALLTD 241 (440)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHcCCceEEEecC
Confidence 333447899999899985
No 12
>1qdl_B Protein (anthranilate synthase (TRPG-SUBUNIT)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: c.23.16.1
Probab=97.92 E-value=2.5e-06 Score=79.77 Aligned_cols=112 Identities=13% Similarity=0.049 Sum_probs=80.5
Q ss_pred cceeeCCCCCCCCChhhhhhhHHHHHHHhhcCCCccc-cccHHHHhHHHHhhhhccccCCCCCcCCHHHHH------HHH
Q 009838 98 AKVCTGPTQTRPLREDEAFKVLDTILRSAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWSEGERR------AMN 170 (524)
Q Consensus 98 ~~v~~gp~~~~P~~~~~a~~~~~~~l~~~~~~l~~~~-~~~~~q~gaffga~~~r~~~~~~~~~~s~~e~~------~~~ 170 (524)
-.|+++||+..|....+.....+. ||.+...+|.+| |+|+|.|..+||+.+.+. ..++|+.|.+.+.+ .+.
T Consensus 47 dglil~gG~~~~~~~~~~~~~~~~-i~~~~~~~PvLGIC~G~QlL~~~~gg~v~~~-~~~~~g~~~~v~~~~~~~~~l~~ 124 (195)
T 1qdl_B 47 DRLIISPGPGTPEKREDIGVSLDV-IKYLGKRTPILGVCLGHQAIGYAFGAKIRRA-RKVFHGKISNIILVNNSPLSLYY 124 (195)
T ss_dssp SEEEECCCSSCTTSHHHHTTHHHH-HHHHTTTSCEEEETHHHHHHHHHTTCEEEEE-EEEEEEEEEEEEECCSSCCSTTT
T ss_pred CEEEECCCCCChhhhhhhhHHHHH-HHHhcCCCcEEEEehHHHHHHHHhCCEEecc-CCCcCCCceEEEECCCCHhHHHh
Confidence 468899999988866555554555 777878899999 999999999999998887 55678888632211 111
Q ss_pred hhhhHh---------hhhCCCceEEEe-C-CCCcccccCCCC----CCCCCCCCCc
Q 009838 171 TFWPLL---------MRALPPDVIFIA-D-PEGSIMGGGGSI----GPHYSGNDPR 211 (524)
Q Consensus 171 ~~~~~l---------~~~lp~~~~f~a-~-p~G~iMg~~~~~----g~~~~~~~~~ 211 (524)
.+...+ +..+|+.+.++| + ++|.|+++.++. |++|.|....
T Consensus 125 ~~~~~~~v~~~H~~~v~~l~~~~~vla~s~~~g~i~a~~~~~~~~~gvQfHPE~~~ 180 (195)
T 1qdl_B 125 GIAKEFKATRYHSLVVDEVHRPLIVDAISAEDNEIMAIHHEEYPIYGVQFHPESVG 180 (195)
T ss_dssp TCCSEEEEEEEEEEEEECCCTTEEEEEEESSSCCEEEEEESSSSEEEESSBTTSTT
T ss_pred cCCCceEEeccccchhhhCCCCcEEEEEECCCCcEEEEEeCCCCEEEEecCCCCCC
Confidence 111100 146888999998 6 799999999874 7788765543
No 13
>3r75_A Anthranilate/para-aminobenzoate synthases compone; ammonia channel, chorismate, type 1 glutamine amidotransfera phenazine biosynthesis, lyase; HET: CYG; 2.10A {Burkholderia SP} PDB: 3r74_A* 3r76_A*
Probab=97.78 E-value=4.6e-06 Score=92.33 Aligned_cols=120 Identities=15% Similarity=0.117 Sum_probs=85.0
Q ss_pred cceeeCCCCCCCCChhhhh--hhHHHHHHHh-hcCCCccc-cccHHHHhHHHHhhhhccccCCCCCcCCHHHHHHHHhhh
Q 009838 98 AKVCTGPTQTRPLREDEAF--KVLDTILRSA-KGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWSEGERRAMNTFW 173 (524)
Q Consensus 98 ~~v~~gp~~~~P~~~~~a~--~~~~~~l~~~-~~~l~~~~-~~~~~q~gaffga~~~r~~~~~~~~~~s~~e~~~~~~~~ 173 (524)
-.|+++|||+.|-+..+-. ...+. |+.+ ...+|++| |+|||.|..+||+.+.+. +.+.++..+. +.+++
T Consensus 488 DgIIlsGGPg~p~d~~~p~i~~~~~l-I~~a~~~~iPiLGIClG~QlLa~alGG~V~~~-~~~~~G~~~~-----i~~~~ 560 (645)
T 3r75_A 488 DVVVMGPGPGDPSDAGDPRIARLYAW-LRHLIDEGKPFMAVCLSHQILNAILGIPLVRR-EVPNQGIQVE-----IDLFG 560 (645)
T ss_dssp SEEEECCCSSCTTCTTSHHHHHHHHH-HHHHHHHTCCEEEETHHHHHHHHHTTCCEEEE-EEEEEEEEEE-----EEETT
T ss_pred CEEEECCCCCChhhhhhhhHHHHHHH-HHHHHHCCCCEEEECHHHHHHHHHhCCEEEcC-CCcccccceE-----Eeeec
Confidence 5799999999998554211 13344 6664 56899999 999999999999999998 7787876552 22222
Q ss_pred hHhh-----------------hhCCCceEEEe-CCCCcccccCCCC--CCCCCCCCCccC----cHHHHHHHHhc
Q 009838 174 PLLM-----------------RALPPDVIFIA-DPEGSIMGGGGSI--GPHYSGNDPREM----RLVGALREVLA 224 (524)
Q Consensus 174 ~~l~-----------------~~lp~~~~f~a-~p~G~iMg~~~~~--g~~~~~~~~~~m----~l~~~L~kL~~ 224 (524)
..++ ..+|+.+.++| +++|.||+++|+. |++|.|...... .++.+++.+..
T Consensus 561 ~~l~~~~~~~~~v~~~h~~~~~~lp~g~~v~A~s~dg~i~Ai~~~~~~GVQFHPE~~~t~~G~~Ll~nFl~~~~~ 635 (645)
T 3r75_A 561 QRERVGFYNTYVAQTVRDEMDVDGVGTVAISRDPRTGEVHALRGPTFSSMQFHAESVLTVDGPRILGEAITHAIR 635 (645)
T ss_dssp EEEEEEEEEEEEEBCSCSEEEETTTEEEEEEECTTTCBEEEEEETTEEEESSBTTSTTCTTHHHHHHHHHHHHTT
T ss_pred CcceecCCCcEEEEEehhhccccCCCCeEEEEEcCCCcEEEEEcCCEEEEEeCCeecCCcchHHHHHHHHHHHHh
Confidence 2121 24888999998 8899999999987 889977654321 25555555543
No 14
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B*
Probab=97.59 E-value=2e-05 Score=73.25 Aligned_cols=106 Identities=13% Similarity=0.082 Sum_probs=71.0
Q ss_pred eeeCCCCCCCCChhhhhhhHHHHHHHhhcCCCccc-cccHHHHhHHHHhhhhccccCCCCCcCCHHH---HHHHHhhhhH
Q 009838 100 VCTGPTQTRPLREDEAFKVLDTILRSAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWSEGE---RRAMNTFWPL 175 (524)
Q Consensus 100 v~~gp~~~~P~~~~~a~~~~~~~l~~~~~~l~~~~-~~~~~q~gaffga~~~r~~~~~~~~~~s~~e---~~~~~~~~~~ 175 (524)
++++|||+.|. +.+. ...+++.+...+|++| |+|+|.|..++|+.+.+. ..+.++..+.-. ...+..+...
T Consensus 51 iil~gGpg~~~---~~~~-~~~l~~~~~~~~PilGIC~G~Qll~~~~Gg~v~~~-~~~~~g~~~~~~~~~~~l~~~~~~~ 125 (192)
T 1i1q_B 51 LMLSPGPGVPS---EAGC-MPELLTRLRGKLPIIGICLGHQAIVEAYGGYVGQA-GEILHGKATSIEHDGQAMFAGLANP 125 (192)
T ss_dssp EEECCCSSCGG---GSTT-HHHHHHHHBTTBCEEEETHHHHHHHHHTSCCCCC----CCSSEEEEEEECCCGGGTTSCSS
T ss_pred EEECCCCcCch---hCch-HHHHHHHHhcCCCEEEECcChHHHHHHhCCEEEeC-CCcEecceeEEecCCChHHhcCCCC
Confidence 99999999997 3333 4455777777899999 999999999999988765 345565443110 0111111110
Q ss_pred ---------hhhhCCCceEEEeCCCCcccccCCCC----CCCCCCCCC
Q 009838 176 ---------LMRALPPDVIFIADPEGSIMGGGGSI----GPHYSGNDP 210 (524)
Q Consensus 176 ---------l~~~lp~~~~f~a~p~G~iMg~~~~~----g~~~~~~~~ 210 (524)
-+..+|+.+.++|..||.+|++.|+. |++|.|...
T Consensus 126 ~~v~~~H~~~v~~lp~~~~v~a~~~~~~~ai~~~~~~~~gvQfHPE~~ 173 (192)
T 1i1q_B 126 LPVARYHSLVGSNVPAGLTINAHFNGMVMAVRHDADRVCGFQFHPESI 173 (192)
T ss_dssp EEEEECCC---CCCCTTCEEEEEETTEEEEEEETTTTEEEESSBTTST
T ss_pred cEEEechhhHhhhCCCccEEEECCCCcEEEEEECCCCEEEEEccCccc
Confidence 12468888999988889999999765 668866544
No 15
>1a9x_B Carbamoyl phosphate synthetase (small chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: c.8.3.1 c.23.16.1 PDB: 1bxr_B* 1ce8_B* 1jdb_C* 1cs0_B* 1m6v_B* 1c30_B* 1c3o_B* 1kee_B* 1t36_B*
Probab=97.43 E-value=3e-05 Score=80.97 Aligned_cols=104 Identities=10% Similarity=0.042 Sum_probs=75.7
Q ss_pred cceeeCCCCCCCCChhhhhhhHHHHHHHhhc-CCCccc-cccHHHHhHHHHhhhhccccCCCCCcCCHHHHHHHHhh--h
Q 009838 98 AKVCTGPTQTRPLREDEAFKVLDTILRSAKG-DLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWSEGERRAMNTF--W 173 (524)
Q Consensus 98 ~~v~~gp~~~~P~~~~~a~~~~~~~l~~~~~-~l~~~~-~~~~~q~gaffga~~~r~~~~~~~~~~s~~e~~~~~~~--~ 173 (524)
-.|++++||+.|. +....++. ||++.. .+|++| |+|||.|+.++||.+.|. +|+.++.+.+- ... +
T Consensus 233 DGliLsGGPgdp~---~~~~~~~~-Ir~~~~~~~PILGIClG~QLLa~A~GG~v~k~-~~gh~g~n~pv-----~~~~~g 302 (379)
T 1a9x_B 233 DGIFLSNGPGDPA---PCDYAITA-IQKFLETDIPVFGICLGHQLLALASGAKTVKM-KFGHHGGNHPV-----KDVEKN 302 (379)
T ss_dssp SEEEECCCSBCST---TCHHHHHH-HHHHTTSCCCEEEETHHHHHHHHHTTCCEEEE-EEEEEEEEEEE-----EETTTT
T ss_pred CEEEEeCCCCChH---HHHHHHHH-HHHHHHcCCCEEEECchHHHHHHHhCcEEEec-ccccccCceee-----EecCCC
Confidence 3689999999987 33445666 777765 599999 999999999999999997 78876654321 000 1
Q ss_pred hHh---------hh--hCCCceEEEe-C-CCCcccccCCCC----CCCCCCCCCc
Q 009838 174 PLL---------MR--ALPPDVIFIA-D-PEGSIMGGGGSI----GPHYSGNDPR 211 (524)
Q Consensus 174 ~~l---------~~--~lp~~~~f~a-~-p~G~iMg~~~~~----g~~~~~~~~~ 211 (524)
+-. ++ .||+.+.+++ + +||.|+|++|+. |++|.|....
T Consensus 303 ~v~its~~H~~aV~~~~Lp~~~~v~a~s~~Dg~ieai~~~~~pi~gVQFHPE~~~ 357 (379)
T 1a9x_B 303 VVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGNPEASP 357 (379)
T ss_dssp EEEEEEEEEEEEECSTTCCTTEEEEEEETTTCCEEEEEESSSSEEEESSCTTCSS
T ss_pred cEEEEecCccceEecccCCCCeEEEEEeCCCCcEEEEEECCCCEEEEEeCCcCCC
Confidence 101 12 4899988886 4 799999999865 6688776544
No 16
>1wl8_A GMP synthase [glutamine-hydrolyzing] subunit A; transferase, gatases, riken structural genomics/proteomics initiative, RSGI; 1.45A {Pyrococcus horikoshii} SCOP: c.23.16.1 PDB: 2d7j_A
Probab=96.97 E-value=0.00037 Score=64.33 Aligned_cols=106 Identities=12% Similarity=0.058 Sum_probs=69.6
Q ss_pred ceeeCCCCCCCCChhhhhhhHHHHHHHh-hcCCCccc-cccHHHHhHHHHhhhhccccCCCCCcCCHH---HHHHHHhhh
Q 009838 99 KVCTGPTQTRPLREDEAFKVLDTILRSA-KGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWSEG---ERRAMNTFW 173 (524)
Q Consensus 99 ~v~~gp~~~~P~~~~~a~~~~~~~l~~~-~~~l~~~~-~~~~~q~gaffga~~~r~~~~~~~~~~s~~---e~~~~~~~~ 173 (524)
.|+++.++ .|. +.+..++. ||.+ ....|++| |+|+|.|+..+|+.+.+. ..+.+|..+.. +...+..+.
T Consensus 46 glil~Gg~-~~~---~~~~~~~~-i~~~~~~~~PilGIC~G~Q~l~~~~gg~v~~~-~~~~~G~~~~~~~~~~~l~~~~~ 119 (189)
T 1wl8_A 46 GIIFSGGP-SLE---NTGNCEKV-LEHYDEFNVPILGICLGHQLIAKFFGGKVGRG-EKAEYSLVEIEIIDEXEIFKGLP 119 (189)
T ss_dssp EEEECCCS-CTT---CCTTHHHH-HHTGGGTCSCEEEETHHHHHHHHHHTCEEEEC-SCCSCEEEEEEESCC--CCTTSC
T ss_pred EEEECCCC-Chh---hhhhHHHH-HHHHhhCCCeEEEEcHHHHHHHHHhCCceecC-CCcccCceeEEEecCchHHhCCC
Confidence 46676665 554 44555666 6776 67899999 999999999999998875 44555532210 011111111
Q ss_pred hHh---------hhhCCCceEEEe-CCCCcccccCCCC----CCCCCCCCC
Q 009838 174 PLL---------MRALPPDVIFIA-DPEGSIMGGGGSI----GPHYSGNDP 210 (524)
Q Consensus 174 ~~l---------~~~lp~~~~f~a-~p~G~iMg~~~~~----g~~~~~~~~ 210 (524)
..+ +..+|+.+.++| +++|.|+++.++. |++|.|...
T Consensus 120 ~~~~~~~~h~~~v~~l~~~~~vla~s~~g~i~a~~~~~~~~~gvQfHPE~~ 170 (189)
T 1wl8_A 120 KRLKVWESHMDEVKELPPKFKILARSETCPIEAMKHEELPIYGVQFHPEVA 170 (189)
T ss_dssp SEEEEEECCSEEEEECCTTEEEEEEESSCSCSEEEESSSCEEEESSCTTST
T ss_pred CceEEEEEeeeehhhCCCCcEEEEEcCCCCEEEEEeCCceEEEEecCCCcC
Confidence 100 146899999988 8899999998764 678876543
No 17
>3l7n_A Putative uncharacterized protein; glutamine amidotransferase, transferas; 2.70A {Streptococcus mutans}
Probab=96.74 E-value=0.00035 Score=67.23 Aligned_cols=112 Identities=13% Similarity=0.024 Sum_probs=71.8
Q ss_pred hccceeeCCCCCCCCC--hhhh----hhhHHHHHHH-hhcCCCccc-cccHHHHhHHHHhhhhccccCCCCCcC----CH
Q 009838 96 AQAKVCTGPTQTRPLR--EDEA----FKVLDTILRS-AKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQW----SE 163 (524)
Q Consensus 96 ~~~~v~~gp~~~~P~~--~~~a----~~~~~~~l~~-~~~~l~~~~-~~~~~q~gaffga~~~r~~~~~~~~~~----s~ 163 (524)
.=-.|+++++|..|-. ++.. ...++. |++ .....|++| |+|+|.|+..||+.+.+. ..+++|.. ++
T Consensus 45 ~~d~lii~GGp~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~PvLGIClG~QlL~~~~Gg~v~~~-~~~~~G~~~v~~~~ 122 (236)
T 3l7n_A 45 DFDMLILMGGPQSPSSTKKEFPYYDAQAEVKL-IQKAAKSEKIIVGVCLGAQLMGVAYGADYLHS-PKKEIGNYLISLTE 122 (236)
T ss_dssp GCSEEEECCCSSCTTCCTTTCTTCCHHHHHHH-HHHHHHTTCEEEEETHHHHHHHHHTTCCCEEE-EEEEEEEEEEEECT
T ss_pred ccCEEEECCCCCCcccccccCcccchHHHHHH-HHHHHHcCCCEEEEchHHHHHHHHhCCEEecC-CCceeeeEEEEEcc
Confidence 3456999999999853 1111 124455 565 456899999 999999999999998887 44544422 11
Q ss_pred -HHH-HHHHhhhhHh--------hhhCCCceEEEe-CCCCcccccCCCC---CCCCCCCC
Q 009838 164 -GER-RAMNTFWPLL--------MRALPPDVIFIA-DPEGSIMGGGGSI---GPHYSGND 209 (524)
Q Consensus 164 -~e~-~~~~~~~~~l--------~~~lp~~~~f~a-~p~G~iMg~~~~~---g~~~~~~~ 209 (524)
++. ..+..+...+ ...+|+.+.++| +++|.++++.++. |++|.|..
T Consensus 123 ~~~~~~l~~~~~~~~~v~~~H~~~~~lp~~~~vla~s~~~~~~a~~~~~~v~gvQfHPE~ 182 (236)
T 3l7n_A 123 AGKMDSYLSDFSDDLLVGHWHGDMPGLPDKAQVLAISQGCPRQIIKFGPKQYAFQCHLEF 182 (236)
T ss_dssp TGGGCGGGTTSCSEEEEEEEEEEECCCCTTCEEEEECSSCSCSEEEEETTEEEESSBSSC
T ss_pred CcccChHHhcCCCCcEEEEecCCcccCCChheEEEECCCCCEEEEEECCCEEEEEeCCCC
Confidence 100 1111111111 146888998888 8888899988753 77885544
No 18
>2a9v_A GMP synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, ligase; 2.24A {Thermoplasma acidophilum} SCOP: c.23.16.1
Probab=96.53 E-value=0.0006 Score=64.75 Aligned_cols=107 Identities=13% Similarity=0.038 Sum_probs=70.3
Q ss_pred ceeeCCC-CCCCCChhhhhhhHHHHHHHhhcCCCccc-cccHHHHhHHHHhhhhccccCCCCCcCCHHHH----HHHHhh
Q 009838 99 KVCTGPT-QTRPLREDEAFKVLDTILRSAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWSEGER----RAMNTF 172 (524)
Q Consensus 99 ~v~~gp~-~~~P~~~~~a~~~~~~~l~~~~~~l~~~~-~~~~~q~gaffga~~~r~~~~~~~~~~s~~e~----~~~~~~ 172 (524)
.|+++++ ++.+.+++......+.++ ...+|.+| |+|+|.|..++|+.+.+. ..|..|..+ -+. ..+..+
T Consensus 57 glIl~GG~p~~~~~~~~~~~l~~~~~---~~~~PiLGIC~G~Qll~~~lGg~v~~~-~~~~~G~~~-v~~~~~~~l~~~~ 131 (212)
T 2a9v_A 57 GLVLSGGAPNIDEELDKLGSVGKYID---DHNYPILGICVGAQFIALHFGASVVKA-KHPEFGKTK-VSVMHSENIFGGL 131 (212)
T ss_dssp EEEEEEECSCGGGTGGGHHHHHHHHH---HCCSCEEEETHHHHHHHHHTTCEEEEE-EEEEEEEEE-EEESCCCGGGTTC
T ss_pred EEEECCCCCCCCcccccchhHHHHHH---hCCCCEEEEChHHHHHHHHhCCEEEcC-CCcccCcee-eEECCCChhHhcC
Confidence 5777777 677765544555556543 45799999 999999999999999886 444444211 110 111111
Q ss_pred hhHh---------hhhCCCceEEEe-CCCCcccccCCCC----CCCCCCCCC
Q 009838 173 WPLL---------MRALPPDVIFIA-DPEGSIMGGGGSI----GPHYSGNDP 210 (524)
Q Consensus 173 ~~~l---------~~~lp~~~~f~a-~p~G~iMg~~~~~----g~~~~~~~~ 210 (524)
...+ +..+|+.+.++| +++|.|+++.++. |++|.|...
T Consensus 132 ~~~~~v~~~H~~~v~~l~~~~~vlA~s~d~~i~ai~~~~~~i~gvQfHPE~~ 183 (212)
T 2a9v_A 132 PSEITVWENHNDEIINLPDDFTLAASSATCQVQGFYHKTRPIYATQFHPEVE 183 (212)
T ss_dssp CSEEEEEEEEEEEEESCCTTEEEEEECSSCSCSEEEESSSSEEEESSCTTST
T ss_pred CCceEEEeEhhhhHhhCCCCcEEEEEeCCCCEEEEEECCCCEEEEEeCCCCC
Confidence 1110 146899999998 8889999999864 678876554
No 19
>1o1y_A Conserved hypothetical protein TM1158; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 1.70A {Thermotoga maritima} SCOP: c.23.16.1
Probab=96.30 E-value=0.0014 Score=63.34 Aligned_cols=110 Identities=13% Similarity=0.005 Sum_probs=70.9
Q ss_pred cceeeCCCCCCCCChhhh---hhhHHHHHHHh-hcCCCccc-cccHHHHhHHHHhhhhccccC-CCCCcCCHHHH----H
Q 009838 98 AKVCTGPTQTRPLREDEA---FKVLDTILRSA-KGDLKDEE-EVSKAQLGAFFSAMTIRANAF-PEATQWSEGER----R 167 (524)
Q Consensus 98 ~~v~~gp~~~~P~~~~~a---~~~~~~~l~~~-~~~l~~~~-~~~~~q~gaffga~~~r~~~~-~~~~~~s~~e~----~ 167 (524)
-.|++++++..+.+++.. ...++. ||++ ...+|++| |+|+|.|+.+||+.+.+. .. ++.+ |.+-+. .
T Consensus 59 Dglil~GG~~~~~~~~~~~~l~~~~~~-i~~~~~~~~PiLGIC~G~QlL~~alGG~v~~~-~~g~~~G-~~~v~~~~~~~ 135 (239)
T 1o1y_A 59 SLVVLLGGYMGAYEEEKYPFLKYEFQL-IEEILKKEIPFLGICLGSQMLAKVLGASVYRG-KNGEEIG-WYFVEKVSDNK 135 (239)
T ss_dssp SEEEECCCSCCTTCTTTCTHHHHHHHH-HHHHHHHTCCEEEETHHHHHHHHHTTCCEEEC-TTCCEEE-EEEEEECCCCG
T ss_pred CEEEECCCCccccCCccChhHHHHHHH-HHHHHHCCCCEEEEchhHHHHHHHcCCeEecC-CCCCccc-cEEEEECCCCc
Confidence 457777788777654311 123444 6666 56799999 999999999999999887 44 3332 442220 1
Q ss_pred HHHhhhhH--------hhhhCCCceEEEe-CCCCcccccCCCC--CCCCCCCCC
Q 009838 168 AMNTFWPL--------LMRALPPDVIFIA-DPEGSIMGGGGSI--GPHYSGNDP 210 (524)
Q Consensus 168 ~~~~~~~~--------l~~~lp~~~~f~a-~p~G~iMg~~~~~--g~~~~~~~~ 210 (524)
.+..+... ..-.+|+.+.++| +++|.+||++++. |++|.|...
T Consensus 136 l~~~~~~~~~~~~~H~~~v~lp~~~~vlA~s~~~~iea~~~~~i~gvQfHPE~~ 189 (239)
T 1o1y_A 136 FFREFPDRLRVFQWHGDTFDLPRRATRVFTSEKYENQGFVYGKAVGLQFHIEVG 189 (239)
T ss_dssp GGTTSCSEEEEEEEESEEECCCTTCEEEEECSSCSCSEEEETTEEEESSBSSCC
T ss_pred hHHhCCCCceeEeecCCccccCCCCEEEEEcCCCCEEEEEECCEEEEEeCccCC
Confidence 11111110 0025888888887 7888999999875 778866543
No 20
>3m3p_A Glutamine amido transferase; structural genomics, nysgrc, PSI-2; HET: MSE; 1.30A {Methylobacillus flagellatus} PDB: 3l83_A*
Probab=96.08 E-value=0.0013 Score=64.75 Aligned_cols=110 Identities=11% Similarity=0.017 Sum_probs=70.9
Q ss_pred ccceeeCCCCCCCCChhhh-hhhHHHHHHHh-hcCCCccc-cccHHHHhHHHHhhhhccccCCCCCcCCHHH-------H
Q 009838 97 QAKVCTGPTQTRPLREDEA-FKVLDTILRSA-KGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWSEGE-------R 166 (524)
Q Consensus 97 ~~~v~~gp~~~~P~~~~~a-~~~~~~~l~~~-~~~l~~~~-~~~~~q~gaffga~~~r~~~~~~~~~~s~~e-------~ 166 (524)
=-.|+++++|..|.++..- ....+. |+++ ....|++| |+|+|.|+.+|||.+.+. ..|+.| |.+.+ .
T Consensus 49 ~d~lIl~GGp~~~~d~~~~~~~~~~~-i~~~~~~~~PvlGIC~G~Qll~~~lGG~V~~~-~~~e~G-~~~v~~~~~~~~~ 125 (250)
T 3m3p_A 49 CSGLAMMGGPMSANDDLPWMPTLLAL-IRDAVAQRVPVIGHCLGGQLLAKAMGGEVTDS-PHAEIG-WVRAWPQHVPQAL 125 (250)
T ss_dssp SSEEEECCCSSCTTSCCTTHHHHHHH-HHHHHHHTCCEEEETHHHHHHHHHTTCCEEEE-EEEEEE-EEEEEECSSHHHH
T ss_pred CCEEEECCCCCcccccchHHHHHHHH-HHHHHHcCCCEEEECHHHHHHHHHhCCEEEeC-CCCcee-eEEEEEecCCCCc
Confidence 3467888888877643111 123344 5553 56899999 999999999999999988 444444 32211 1
Q ss_pred HHHHhhhhHhh--------hhCCCceEEEe-CCCCcccccCCCC---CCCCCCCCC
Q 009838 167 RAMNTFWPLLM--------RALPPDVIFIA-DPEGSIMGGGGSI---GPHYSGNDP 210 (524)
Q Consensus 167 ~~~~~~~~~l~--------~~lp~~~~f~a-~p~G~iMg~~~~~---g~~~~~~~~ 210 (524)
.++ .+...+. =.||+.+.++| +++|.++++.++. |++|.|...
T Consensus 126 ~l~-g~~~~~~v~~~H~~~v~lp~~~~vlA~s~~~~~~a~~~~~~~~GvQfHPE~~ 180 (250)
T 3m3p_A 126 EWL-GTWDELELFEWHYQTFSIPPGAVHILRSEHCANQAYVLDDLHIGFQCHIEMQ 180 (250)
T ss_dssp HHH-SCSSCEEEEEEEEEEECCCTTEEEEEEETTEEEEEEEETTTEEEESSCTTCC
T ss_pred ccc-cCCCccEEEEEccceeecCCCCEEEEEeCCCCEEEEEECCeeEEEEeCCcCC
Confidence 122 1111110 15899999998 8889999998855 778855443
No 21
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum}
Probab=95.06 E-value=0.0043 Score=67.48 Aligned_cols=121 Identities=5% Similarity=-0.053 Sum_probs=75.3
Q ss_pred ceeeCCCCCCCCChhhhhhhHHHHHHHhh-cCCCccc-cccHHHHhHHHHhhhhccccCCCCCcCC----HHHH------
Q 009838 99 KVCTGPTQTRPLREDEAFKVLDTILRSAK-GDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS----EGER------ 166 (524)
Q Consensus 99 ~v~~gp~~~~P~~~~~a~~~~~~~l~~~~-~~l~~~~-~~~~~q~gaffga~~~r~~~~~~~~~~s----~~e~------ 166 (524)
.|+++.|++.+-.++ +..+.+.+++.+. ..+|++| |+|+|.|...||+.+.++ .-.++|..+ ++..
T Consensus 53 gIIlsGGp~s~~~~~-~~~~~~~l~~~a~~~g~PvLGIC~G~QlLa~~lGG~V~~~-~~~E~G~~~l~~~~~~~~~~~p~ 130 (556)
T 3uow_A 53 GVILSGGPYSVTEAG-SPHLKKEVFEYFLEKKIPIFGICYGMQEIAVQMNGEVKKS-KTSEYGCTDVNILRNDNINNITY 130 (556)
T ss_dssp EEEECCCSCCTTSTT-CCCCCHHHHHHHHHTTCCEEEETHHHHHHHHHTTCEEEEE-EEEEEEEEEEEECCTTGGGGCSG
T ss_pred EEEECCCCCcccccC-CcchhHHHHHHhhhcCCCEEEECHHHHHHHHHhCCcEecC-CCcccCCcceeeccCcccccccc
Confidence 466666998887543 3444455566554 3799999 999999999999999886 222333211 1110
Q ss_pred ------------------------HHHHhhhhH-h---------hhhCCCceEEEe-CCCCcccccCCCC----CCCCCC
Q 009838 167 ------------------------RAMNTFWPL-L---------MRALPPDVIFIA-DPEGSIMGGGGSI----GPHYSG 207 (524)
Q Consensus 167 ------------------------~~~~~~~~~-l---------~~~lp~~~~f~a-~p~G~iMg~~~~~----g~~~~~ 207 (524)
..+..+++. + +..+|+.+.++| +++|.|+++.++. |++|.|
T Consensus 131 v~~~~~~~~~mg~~~n~~~~~~~~~Lf~gl~~~~~~v~~~H~d~V~~lp~g~~vlA~s~~~~i~ai~~~~~~i~GvQFHP 210 (556)
T 3uow_A 131 CRNFGDSSSAMDLYSNYKLMNETCCLFENIKSDITTVWMNHNDEVTKIPENFYLVSSSENCLICSIYNKEYNIYGVQYHP 210 (556)
T ss_dssp GGGC---CCHHHHHTTSCCCC--CGGGTTCCSSEEEEEEEEEEEEEECCTTCEEEEEETTEEEEEEEETTTTEEEESSCT
T ss_pred eecccccccccccccccccccccchhhcccccCceEEEEEccceeeccCCCcEEEEEeCCCCEEEEEECCCCEEEEEcCC
Confidence 111111111 0 147899999998 8899999998754 778877
Q ss_pred CCCccCcHHHHHHH
Q 009838 208 NDPREMRLVGALRE 221 (524)
Q Consensus 208 ~~~~~m~l~~~L~k 221 (524)
.......-..+++.
T Consensus 211 E~~~~~~G~~ll~n 224 (556)
T 3uow_A 211 EVYESLDGELMFYN 224 (556)
T ss_dssp TSTTSTTHHHHHHH
T ss_pred CCCccccchHHHHH
Confidence 66544222334443
No 22
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens}
Probab=94.94 E-value=0.0076 Score=67.38 Aligned_cols=120 Identities=8% Similarity=-0.044 Sum_probs=67.2
Q ss_pred cceeeCCCCCCCCChhhhhhhHHHHHHHhhcCCCccc-cccHHHHhHHHHhhhhccccCCCCCcCCHHHH----HHHHhh
Q 009838 98 AKVCTGPTQTRPLREDEAFKVLDTILRSAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWSEGER----RAMNTF 172 (524)
Q Consensus 98 ~~v~~gp~~~~P~~~~~a~~~~~~~l~~~~~~l~~~~-~~~~~q~gaffga~~~r~~~~~~~~~~s~~e~----~~~~~~ 172 (524)
-.|++++||+.+.++ ++..+.+.+ +...+|++| |+|+|.|...||+.+.+. ..+++| |.+-+- .++..+
T Consensus 74 dGIILsGGp~s~~~~-~~~~~~~~i---~~~g~PvLGIC~G~QlLa~~lGG~v~~~-~~~e~G-~~~v~~~~~~~Lf~~l 147 (697)
T 2vxo_A 74 RAIIISGGPNSVYAE-DAPWFDPAI---FTIGKPVLGICYGMQMMNKVFGGTVHKK-SVREDG-VFNISVDNTCSLFRGL 147 (697)
T ss_dssp SEEEEEECC--------CCCCCGGG---TTSSCCEEEEEHHHHHHHHHTTCCBCC---------CEEEEECTTSGGGTTC
T ss_pred CEEEECCCCCcccCc-cchhHHHHH---HhCCCCEEEECHHHHHHHHHhCCeEeec-CCCccc-eEEEEecCCChhhhcC
Confidence 358888888887643 344444443 235699999 999999999999999987 566666 332111 011111
Q ss_pred hhH---------hhhhCCCceEEEeCCCCcccccCCCC----CCCCCCCCCccCcHHHHHHHHh
Q 009838 173 WPL---------LMRALPPDVIFIADPEGSIMGGGGSI----GPHYSGNDPREMRLVGALREVL 223 (524)
Q Consensus 173 ~~~---------l~~~lp~~~~f~a~p~G~iMg~~~~~----g~~~~~~~~~~m~l~~~L~kL~ 223 (524)
... -+..+|+.+.++|..++.|+|+.|.. |++|.|.......-..+++...
T Consensus 148 ~~~~~v~~~H~~~V~~lp~g~~vlA~s~~~i~ai~~~~~~i~GvQFHPE~~~t~~g~~ll~nFl 211 (697)
T 2vxo_A 148 QKEEVVLLTHGDSVDKVADGFKVVARSGNIVAGIANESKKLYGAQFHPEVGLTENGKVILKNFL 211 (697)
T ss_dssp CSEEEECCCSSCCBSSCCTTCEEEEEETTEEEEEEETTTTEEEESSCTTSSSSTTHHHHHHHHH
T ss_pred CccCcceeecccceecCCCCeEEEEEeCCceEEEEeCCCCEEEEEecccCCCCccchhhhhhhh
Confidence 000 01468999999985567999999766 6688776554322344444444
No 23
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1
Probab=94.41 E-value=0.011 Score=63.76 Aligned_cols=109 Identities=9% Similarity=-0.002 Sum_probs=69.7
Q ss_pred cceeeCCCCCCCCChhhhhhhHHHHHHHhhcCCCccc-cccHHHHhHHHHhhhhccccCCCCCcCCHHHH----HHHHhh
Q 009838 98 AKVCTGPTQTRPLREDEAFKVLDTILRSAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWSEGER----RAMNTF 172 (524)
Q Consensus 98 ~~v~~gp~~~~P~~~~~a~~~~~~~l~~~~~~l~~~~-~~~~~q~gaffga~~~r~~~~~~~~~~s~~e~----~~~~~~ 172 (524)
-.|+++++|+.+.+++ +-.+.+.+ +...+|++| |+|+|.|...+|+.+.+. ..++.|..+ -+. .++..+
T Consensus 52 dgiILsGGp~s~~~~~-~~~~~~~~---~~~g~PvLGIC~G~Qlla~~~GG~V~~~-~~~e~G~~~-v~~~~~~~L~~~l 125 (525)
T 1gpm_A 52 SGIILSGGPESTTEEN-SPRAPQYV---FEAGVPVFGVCYGMQTMAMQLGGHVEAS-NEREFGYAQ-VEVVNDSALVRGI 125 (525)
T ss_dssp SEEEECCCSSCTTSTT-CCCCCGGG---GTSSSCEEEETHHHHHHHHHHTCEEECC-SSCEEEEEE-EEECSCCTTTTTC
T ss_pred CEEEECCcCccccccC-CcchHHHH---HHCCCCEEEEChHHHHHHHHcCCEEEeC-CCcccceEE-EEeCCCCHhhccC
Confidence 4677777888776543 32232222 234799999 999999999999999887 334443211 110 011111
Q ss_pred hh--------H---------hhhhCCCceEEEe-CCCCcccccCCCC----CCCCCCCCCcc
Q 009838 173 WP--------L---------LMRALPPDVIFIA-DPEGSIMGGGGSI----GPHYSGNDPRE 212 (524)
Q Consensus 173 ~~--------~---------l~~~lp~~~~f~a-~p~G~iMg~~~~~----g~~~~~~~~~~ 212 (524)
.. . -+..+|+.+.++| +++|.|+|+.|+. |++|.|.....
T Consensus 126 ~~~~~~~~~~~~~v~~~H~~~V~~lp~g~~v~A~s~~~~i~ai~~~~~~i~gvQFHPE~~~~ 187 (525)
T 1gpm_A 126 EDALTADGKPLLDVWMSHGDKVTAIPSDFITVASTESCPFAIMANEEKRFYGVQFHPEVTHT 187 (525)
T ss_dssp CSEECTTSCEEEEEEEEECSEEEECCTTCEEEEECSSCSCSEEEETTTTEEEESBCTTSTTS
T ss_pred ccccccccccceEEEEEccceeeeCCCCCEEEEECCCCCEEEEEECCCCEEEEecCCCCCcc
Confidence 11 0 0146899999998 8899999998754 77887765543
No 24
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*
Probab=94.36 E-value=0.0096 Score=63.71 Aligned_cols=126 Identities=13% Similarity=-0.024 Sum_probs=75.3
Q ss_pred ceeeCCCCCCCCChhhhhhhHHHHHHHhhcCCCccc-cccHHHHhHHHHhhhhccccCCCCCcCCHHHH---HHHHhhhh
Q 009838 99 KVCTGPTQTRPLREDEAFKVLDTILRSAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWSEGER---RAMNTFWP 174 (524)
Q Consensus 99 ~v~~gp~~~~P~~~~~a~~~~~~~l~~~~~~l~~~~-~~~~~q~gaffga~~~r~~~~~~~~~~s~~e~---~~~~~~~~ 174 (524)
.|+++.+|..+.+++ +..+...+ +...+|++| |+|+|.|...+|+.+.+. ..++.|..+ -+. ..++.+..
T Consensus 45 giIlsGGp~s~~~~~-~~~~~~~~---~~~~~PvLGIC~G~Qlla~~~GG~v~~~-~~~e~G~~~-v~~~~~~l~~~~~~ 118 (503)
T 2ywb_A 45 ALILSGGPRSVFDPD-APRPDPRL---FSSGLPLLGICYGMQLLAQELGGRVERA-GRAEYGKAL-LTRHEGPLFRGLEG 118 (503)
T ss_dssp EEEECCCSSCSSCTT-CCCCCGGG---GCSSCCEEEETHHHHHHHHTTTCEEECC----CEEEEE-CSEECSGGGTTCCS
T ss_pred EEEECCCCchhccCC-CcchHHHH---HhCCCCEEEECHHHHHHHHHhCCeEeeC-CCCccceEE-EEecCcHHhhcCCC
Confidence 577777887776443 32222221 235799999 999999999999999887 334444221 111 01111100
Q ss_pred Hh---------hhhCCCceEEEe-CCCCcccccCCCC----CCCCCCCCCccC----cHHHHHHHHhcCCCCCH
Q 009838 175 LL---------MRALPPDVIFIA-DPEGSIMGGGGSI----GPHYSGNDPREM----RLVGALREVLAGGHLGY 230 (524)
Q Consensus 175 ~l---------~~~lp~~~~f~a-~p~G~iMg~~~~~----g~~~~~~~~~~m----~l~~~L~kL~~G~~Ls~ 230 (524)
.. +..+|+.+.++| ++++.|+++.++. |++|.|...... .++.+++......+.+.
T Consensus 119 ~~~v~~~H~~~v~~lp~g~~v~A~s~~~~i~ai~~~~~~~~gvQFHPE~~~~~~g~~ll~~F~~~~~~~~~~~~ 192 (503)
T 2ywb_A 119 EVQVWMSHQDAVTAPPPGWRVVAETEENPVAAIASPDGRAYGVQFHPEVAHTPKGMQILENFLELAGVKRDWTP 192 (503)
T ss_dssp CCEEEEECSCEEEECCTTCEEEEECSSCSCSEEECTTSSEEEESBCTTSTTSTTHHHHHHHHHHHTTCCCCCCH
T ss_pred ccEEEEECCCccccCCCCCEEEEEECCCCEEEEEeCCCCEEEEecCCCcccccccHHHHHHHHHHhhhhccccc
Confidence 00 146899999998 8889999998855 778877654431 24555533333446664
No 25
>2vpi_A GMP synthase; guanine monophosphate synthetase, phosphoprotein, GMP synthetase, GMP biosynthesis, glutamine amidotransferase, ligase, cytoplasm; 2.40A {Homo sapiens}
Probab=93.79 E-value=0.0069 Score=57.90 Aligned_cols=107 Identities=8% Similarity=-0.027 Sum_probs=60.7
Q ss_pred ceeeCCCCCCCCChhhhhhhHHHHHHHhhcCCCccc-cccHHHHhHHHHhhhhccccCCCCCcCCHHHH----HHHHhhh
Q 009838 99 KVCTGPTQTRPLREDEAFKVLDTILRSAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWSEGER----RAMNTFW 173 (524)
Q Consensus 99 ~v~~gp~~~~P~~~~~a~~~~~~~l~~~~~~l~~~~-~~~~~q~gaffga~~~r~~~~~~~~~~s~~e~----~~~~~~~ 173 (524)
.|+++.++..|-+++ +....+.++ ...+|++| |+|+|.|+.+||+.+.+. ..+++| |.+-+. .+.+.+.
T Consensus 70 glil~Gg~~~~~~~~-~~~~~~~~~---~~~~PilGIC~G~Qll~~~~GG~v~~~-~~~~~G-~~~v~~~~~~~l~~~l~ 143 (218)
T 2vpi_A 70 AIIISGGPNSVYAED-APWFDPAIF---TIGKPVLGICYGMQMMNKVFGGTVHKK-SVREDG-VFNISVDNTCSLFRGLQ 143 (218)
T ss_dssp EEEEEC----------CCCCCGGGG---TSSCCEEEETHHHHHHHHHTTCCEEEE-EECSCE-EEEEEECTTSGGGTTCC
T ss_pred EEEECCCCccccccc-chhHHHHHH---HcCCCEEEEcHHHHHHHHHhCCceEeC-CCCccc-EEEEEEccCChhHhcCC
Confidence 477777777665332 222222222 34699999 999999999999999886 445444 321111 1111111
Q ss_pred hH---------hhhhCCCceEEEeCCCCcccccCCCC----CCCCCCCCCc
Q 009838 174 PL---------LMRALPPDVIFIADPEGSIMGGGGSI----GPHYSGNDPR 211 (524)
Q Consensus 174 ~~---------l~~~lp~~~~f~a~p~G~iMg~~~~~----g~~~~~~~~~ 211 (524)
.. -+..+|+.+.++|..+|.|+++.++. |++|.|....
T Consensus 144 ~~~~v~~~H~~~v~~l~~~~~vlA~s~~~i~ai~~~~~~i~gvQfHPE~~~ 194 (218)
T 2vpi_A 144 KEEVVLLTHGDSVDKVADGFKVVARSGNIVAGIANESKKLYGAQFHPEVGL 194 (218)
T ss_dssp SEEEEEECSEEEESSCCTTCEEEEEETTEEEEEEETTTTEEEESSCTTSTT
T ss_pred CCcEEeehhhhHhhhcCCCCEEEEEcCCeEEEEEECCCCEEEEEcCCCCCC
Confidence 10 01468889999884478999998654 6788765543
No 26
>2v4u_A CTP synthase 2; pyrimidine biosynthesis, glutamine amidotransferase, glutaminase domain, 5-OXO-L-norleucine, DON, ligase, phosphoprotein; HET: CYD; 2.3A {Homo sapiens} PDB: 2vkt_A
Probab=93.39 E-value=0.04 Score=54.90 Aligned_cols=108 Identities=11% Similarity=0.039 Sum_probs=67.7
Q ss_pred cceeeCCCCCCCCChhhhhhhHHHHHHHh-hcCCCccc-cccHHHHhHHHHhhhh---cccc--CC------------CC
Q 009838 98 AKVCTGPTQTRPLREDEAFKVLDTILRSA-KGDLKDEE-EVSKAQLGAFFSAMTI---RANA--FP------------EA 158 (524)
Q Consensus 98 ~~v~~gp~~~~P~~~~~a~~~~~~~l~~~-~~~l~~~~-~~~~~q~gaffga~~~---r~~~--~~------------~~ 158 (524)
-.|+++++++.+. .. ..++. ++++ ...+|++| |+|+|.|+.+||+.+. +++. |. .|
T Consensus 92 dgiil~GG~~~~~---~~-~~~~~-i~~~~~~~~PilGIC~G~Q~l~~a~Gg~v~~~~~~~~~e~~~~~~~~~i~~~~~h 166 (289)
T 2v4u_A 92 DGILVPGGFGIRG---TL-GKLQA-ISWARTKKIPFLGVXLGMQLAVIEFARNCLNLKDADSTEFRPNAPVPLVIDMPEH 166 (289)
T ss_dssp SEEEECSCCSSTT---HH-HHHHH-HHHHHHTTCCEEEETHHHHHHHHHHHHHHSCCTTEEESTTCTTCSEEEEEECCBC
T ss_pred CEEEecCCCCchh---HH-HHHHH-HHHHHHcCCcEEEECccHHHHHHHHhccccccccCcccccCccccccceecchhh
Confidence 4577766766543 22 24555 6666 45799999 9999999999999986 3321 31 23
Q ss_pred Cc----------CCH-----HHHHHHHhhhh----------------HhhhhCC-CceEEEe-CCCCc-ccccCCCC---
Q 009838 159 TQ----------WSE-----GERRAMNTFWP----------------LLMRALP-PDVIFIA-DPEGS-IMGGGGSI--- 201 (524)
Q Consensus 159 ~~----------~s~-----~e~~~~~~~~~----------------~l~~~lp-~~~~f~a-~p~G~-iMg~~~~~--- 201 (524)
.+ |.+ ..-.+...++. ..+..|| +.+.++| ++||. ||++.++.
T Consensus 167 ~~~~~~~~~~~g~~~v~~~~~~s~l~~~~~~~~~v~~~H~H~y~vn~~~v~~l~~~g~~v~A~s~dg~~ieaie~~~~p~ 246 (289)
T 2v4u_A 167 NPGNLGGTMRLGIRRTVFKTENSILRKLYGDVPFIEERHRHRFEVNPNLIKQFEQNDLSFVGQDVDGDRMEIIELANHPY 246 (289)
T ss_dssp CTTCSSCBCEEEEEEEEESCSCCHHHHHTTSCSEEEEEEEECEEECGGGSGGGTTSSEEEEEEETTSCSEEEEEESSSSC
T ss_pred cccccCCccccceEEEEEecCCCHHHHhcCCCceEEEecccccccCHHHHHhcccCCeEEEEEcCCCCeEEEEEcCCCCe
Confidence 22 110 01112122222 3345788 8999998 88998 99999874
Q ss_pred --CCCCCCCCC
Q 009838 202 --GPHYSGNDP 210 (524)
Q Consensus 202 --g~~~~~~~~ 210 (524)
|++|.|...
T Consensus 247 ~lGvQfHPE~~ 257 (289)
T 2v4u_A 247 FVGVQFHPEFS 257 (289)
T ss_dssp EEEESSBGGGG
T ss_pred EEEEECCCCCC
Confidence 677765443
No 27
>2w7t_A CTP synthetase, putative cytidine triphosphate synthase; glutaminase domain, trypsanosoma brucei, ligase, acivicin; HET: 5CS; 2.10A {Trypanosoma brucei}
Probab=93.16 E-value=0.1 Score=51.38 Aligned_cols=52 Identities=6% Similarity=-0.167 Sum_probs=38.0
Q ss_pred hhhccceeeCCCCCCCCChhhhhhhHHHHHHHhh-cCCCccc-cccHHHHhHHHHhhhh
Q 009838 94 LEAQAKVCTGPTQTRPLREDEAFKVLDTILRSAK-GDLKDEE-EVSKAQLGAFFSAMTI 150 (524)
Q Consensus 94 ~~~~~~v~~gp~~~~P~~~~~a~~~~~~~l~~~~-~~l~~~~-~~~~~q~gaffga~~~ 150 (524)
++.--.|++++|++.|. ..+ .++. ++++. ..+|++| |+|+|.|..+||+.+.
T Consensus 65 ~~~~dgiil~GG~~~~~---~~~-~~~~-i~~~~~~~~PilGIC~G~Qll~~a~Gg~v~ 118 (273)
T 2w7t_A 65 LLGCDGIFVPGGFGNRG---VDG-KCAA-AQVARMNNIPYFGVXLGMQVAVIELSRNVV 118 (273)
T ss_dssp HHTCSEEEECCCCTTTT---HHH-HHHH-HHHHHHHTCCEEEETHHHHHHHHHHHHHTT
T ss_pred HhhCCEEEecCCCCCcC---chh-HHHH-HHHHHHCCCcEEEECcCHHHHHHHHhCccc
Confidence 43334677777876654 333 3455 67664 6899999 9999999999999986
No 28
>1s1m_A CTP synthase; CTP synthetase, UTP:ammonia ligase (ADP-forming), cytidine 5 triphosphate synthase, ammonia lyase; 2.30A {Escherichia coli} SCOP: c.23.16.1 c.37.1.10 PDB: 2ad5_A*
Probab=93.06 E-value=0.058 Score=58.84 Aligned_cols=50 Identities=6% Similarity=-0.143 Sum_probs=39.1
Q ss_pred cceeeCCCCCCCCChhhhhhhHHHHHHHhh-cCCCccc-cccHHHHhHHHHhhhhcc
Q 009838 98 AKVCTGPTQTRPLREDEAFKVLDTILRSAK-GDLKDEE-EVSKAQLGAFFSAMTIRA 152 (524)
Q Consensus 98 ~~v~~gp~~~~P~~~~~a~~~~~~~l~~~~-~~l~~~~-~~~~~q~gaffga~~~r~ 152 (524)
-.|++++|++.|- ..+ .++. +++++ ..+|.+| |+|+|.+...||+.+.+.
T Consensus 345 DGIilsGGpg~~~---~~g-~~~~-i~~a~~~~~PiLGIClG~Qll~va~Gg~v~~l 396 (545)
T 1s1m_A 345 DAILVPGGFGYRG---VEG-MITT-ARFARENNIPYLGICLGMQVALIDYARHVANM 396 (545)
T ss_dssp SEEEECCCCSSTT---HHH-HHHH-HHHHHHTTCCEEEETHHHHHHHHHHHHHHHCC
T ss_pred CEEEECCCCCCcc---chh-hHHH-HHHHHHCCCcEEEECChHHHHHHHhCCceecC
Confidence 4588888988875 333 2344 67776 5799999 999999999999999853
No 29
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}
Probab=92.32 E-value=0.014 Score=62.84 Aligned_cols=109 Identities=9% Similarity=-0.013 Sum_probs=63.4
Q ss_pred cceeeCCCCCCCCChhhhhhhHHHHHHHhhcCCCccc-cccHHHHhHHHHhhhhccccCCCCCcCCH---HHHHHHHhhh
Q 009838 98 AKVCTGPTQTRPLREDEAFKVLDTILRSAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWSE---GERRAMNTFW 173 (524)
Q Consensus 98 ~~v~~gp~~~~P~~~~~a~~~~~~~l~~~~~~l~~~~-~~~~~q~gaffga~~~r~~~~~~~~~~s~---~e~~~~~~~~ 173 (524)
-.|+++.||..+-.+ .+..+.+.+ +...+|++| |+|+|.|...||+.+.+. ..++.|..+- .+...+..++
T Consensus 55 dgIILsGGp~sv~~~-~~~~~~~~~---~~~~~PvLGIC~G~Qlla~~lGG~V~~~-~~~e~G~~~v~~~~~~~l~~~l~ 129 (527)
T 3tqi_A 55 HGIILSGGPETVTLS-HTLRAPAFI---FEIGCPVLGICYGMQTMAYQLGGKVNRT-AKAEFGHAQLRVLNPAFLFDGIE 129 (527)
T ss_dssp SEEEECCCCC----------CCCST---TTSSSCEEEETHHHHHHHHHSSSCBC------CEEEEEEEESSCTTTTSSCC
T ss_pred CEEEECCcCcccccC-CChhhHHHH---HhcCCCEEEEChHHHHHHHHcCCeEEeC-CCccccceEEEEcCCChhhcCCc
Confidence 368888888877633 333333321 345799999 999999999999999887 4444443210 0001111111
Q ss_pred h--------H---------hhhhCCCceEEEe-CCCCcccccCCCC----CCCCCCCCCc
Q 009838 174 P--------L---------LMRALPPDVIFIA-DPEGSIMGGGGSI----GPHYSGNDPR 211 (524)
Q Consensus 174 ~--------~---------l~~~lp~~~~f~a-~p~G~iMg~~~~~----g~~~~~~~~~ 211 (524)
. . -+..||+.+.++| ++++.|+++.++. |++|.|....
T Consensus 130 ~~~~~~~~~~~~v~~~H~d~v~~lp~g~~v~A~s~~~~i~ai~~~~~~~~GvQFHPE~~~ 189 (527)
T 3tqi_A 130 DQVSPQGEPLLDVWMSHGDIVSELPPGFEATACTDNSPLAAMADFKRRFFGLQFHPEVTH 189 (527)
T ss_dssp SBCCTTSCCEEEEEEESSSCBCSCCTTCEEEEEETTEEEEEEECSSSCEEEESBCSSSTT
T ss_pred cccccccccceEEEEEcccchhccCCCCEEEEEeCCCcEEEEEcCCCCEEEEEecccccc
Confidence 1 0 1257899999998 8889999998755 7788776554
No 30
>1l9x_A Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCOP: c.23.16.1
Probab=91.27 E-value=0.017 Score=58.24 Aligned_cols=65 Identities=11% Similarity=-0.009 Sum_probs=41.2
Q ss_pred hhhccceeeCCCCCCCCCh---hhhhhhHHHHHHHh-hc-CCCccc-cccHHHHhHHHHhhhhccccCCCCC
Q 009838 94 LEAQAKVCTGPTQTRPLRE---DEAFKVLDTILRSA-KG-DLKDEE-EVSKAQLGAFFSAMTIRANAFPEAT 159 (524)
Q Consensus 94 ~~~~~~v~~gp~~~~P~~~---~~a~~~~~~~l~~~-~~-~l~~~~-~~~~~q~gaffga~~~r~~~~~~~~ 159 (524)
++.=-.|++..+++.+-+. +.....++.+++.. .| .+|++| |+|+|.|..++|+.+.+. .++.++
T Consensus 84 l~~~dglil~GG~~~v~p~~~~~~~~~l~~~~~~~~~~g~~~PiLGIC~G~Qll~~a~GG~~~~~-~~~~~g 154 (315)
T 1l9x_A 84 FKSINGILFPGGSVDLRRSDYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGFEELSLLISGECLLT-ATDTVD 154 (315)
T ss_dssp HHHSSEEEECCCCCCTTTCHHHHHHHHHHHHHHHHHHTTCCCCEEEETHHHHHHHHHHHSSCCCE-EEEEEE
T ss_pred HhcCCEEEEeCCCcccChhhhhHHHHHHHHHHHHHHhcCCCceEEEEChHHHHHHHHhCCccccc-cccccC
Confidence 3333467776666665321 12234566644333 23 599999 999999999999987665 455444
No 31
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=89.22 E-value=0.23 Score=48.12 Aligned_cols=92 Identities=10% Similarity=-0.000 Sum_probs=58.4
Q ss_pred hHHHHHHHhh-cCCCccc-cccHHHHhHHHHhhhhccc-----cCCCCC-------cCCHHHH----HHHHhhhhHh---
Q 009838 118 VLDTILRSAK-GDLKDEE-EVSKAQLGAFFSAMTIRAN-----AFPEAT-------QWSEGER----RAMNTFWPLL--- 176 (524)
Q Consensus 118 ~~~~~l~~~~-~~l~~~~-~~~~~q~gaffga~~~r~~-----~~~~~~-------~~s~~e~----~~~~~~~~~l--- 176 (524)
.++. ||++. ..+|++| |+|+|.|.-.||+.+.+.- ..+.|. -|.+-+. .+...++..+
T Consensus 97 ~~~l-ir~a~~~~~PiLGIC~G~Qll~~a~Gg~v~~~~~~~~~~~~~h~~~~~~~~g~~~v~~~~~s~l~~~~~~~~~v~ 175 (254)
T 3fij_A 97 EIAL-VRAALDAGKPIFAICRGMQLVNVALGGTLYQDISQVETKALQHLQRVDEQLGSHTIDIEPTSELAKHHPNKKLVN 175 (254)
T ss_dssp HHHH-HHHHHHTTCCEEEETHHHHHHHHHTTCCEESSGGGSSSCCCCCBCCSCTTSCCEEEEECTTSSGGGTCCTTEEEC
T ss_pred HHHH-HHHHHHcCCCEEEECHHHHHHHHHhCCceecccccccCccccccCCCCCccceEEEEeCCCChHHHhcCCcEEEE
Confidence 3444 67664 5899999 9999999999999987641 112222 1221110 1111112111
Q ss_pred ------hhhCCCceEEEe-CCCCcccccCCC-C-----CCCCCCCCC
Q 009838 177 ------MRALPPDVIFIA-DPEGSIMGGGGS-I-----GPHYSGNDP 210 (524)
Q Consensus 177 ------~~~lp~~~~f~a-~p~G~iMg~~~~-~-----g~~~~~~~~ 210 (524)
++.||+.+.++| ++||.|+|+.++ . |++|.|...
T Consensus 176 ~~H~~~v~~l~~g~~v~a~s~dg~ieai~~~~~~~~~~gvQfHPE~~ 222 (254)
T 3fij_A 176 SLHHQFIKKLAPSFKVTARTADGMIEAVEGDNLPSWYLGVQWHPELM 222 (254)
T ss_dssp CBCSCEESSCCSSEEEEEEETTCCEEEEEESSCSSCEEEESSCGGGT
T ss_pred EeccchhhccCCCcEEEEEeCCCcEEEEEecCCCCeEEEEEcCCccC
Confidence 146899999998 889999999987 3 667765443
No 32
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A
Probab=79.86 E-value=1.4 Score=48.16 Aligned_cols=54 Identities=6% Similarity=-0.175 Sum_probs=41.8
Q ss_pred hhhccceeeCCCCCCCCChhhhhhhHHHHHHHhh-cCCCccc-cccHHHHhHHHHhhhhcc
Q 009838 94 LEAQAKVCTGPTQTRPLREDEAFKVLDTILRSAK-GDLKDEE-EVSKAQLGAFFSAMTIRA 152 (524)
Q Consensus 94 ~~~~~~v~~gp~~~~P~~~~~a~~~~~~~l~~~~-~~l~~~~-~~~~~q~gaffga~~~r~ 152 (524)
|+.--.|++++|++.|. ..++ ++. +++++ ..+|.+| |+|+|.+...||+.+.+.
T Consensus 353 L~~~DGIILpGGfGd~~---~~g~-i~~-ir~a~e~~iPiLGICLGmQlL~~a~Gg~v~~l 408 (550)
T 1vco_A 353 FRDVSGILVPGGFGVRG---IEGK-VRA-AQYARERKIPYLGICLGLQIAVIEFARNVAGL 408 (550)
T ss_dssp TTTCSCEEECCCCSSTT---HHHH-HHH-HHHHHHTTCCEEEETHHHHHHHHHHHHHTSCC
T ss_pred HhcCCEEEECCCCCCcc---hhhh-HHH-HHHHHHCCCcEEEECcCHHHHHHHhCcccccC
Confidence 43334688888988885 3443 455 78886 6899999 999999999999998864
No 33
>2elc_A Trp D, anthranilate phosphoribosyltransferase; structural genomics, NPPSFA, national project O structural and functional analyses; 1.55A {Thermus thermophilus} SCOP: a.46.2.1 c.27.1.1 PDB: 1v8g_A
Probab=75.44 E-value=19 Score=36.53 Aligned_cols=114 Identities=21% Similarity=0.269 Sum_probs=66.9
Q ss_pred CCCCCChhhhhhhHHHHHHHhhcCCCccccccHHHHhHHHHhhhhccccCCCCCcCCHHHHHHHHhhhhHhhhhCCC---
Q 009838 106 QTRPLREDEAFKVLDTILRSAKGDLKDEEEVSKAQLGAFFSAMTIRANAFPEATQWSEGERRAMNTFWPLLMRALPP--- 182 (524)
Q Consensus 106 ~~~P~~~~~a~~~~~~~l~~~~~~l~~~~~~~~~q~gaffga~~~r~~~~~~~~~~s~~e~~~~~~~~~~l~~~lp~--- 182 (524)
.+++|+.|||..+++.|+. |.++..|+|||+-|+-+|+ . |.+|.+.+..--......++.
T Consensus 9 ~g~~Lt~eEa~~~~~~i~~---------g~~~~~QiaAfL~alr~kg---e-----t~~Eiag~~~am~~~~~~~~~~~~ 71 (329)
T 2elc_A 9 LGEVLEEEEAYEVMRALMA---------GEVSPVRAAGLLVALSLRG---E-----RPHEIAAMARAMREAARPLRVHRR 71 (329)
T ss_dssp TTCCCCHHHHHHHHHHHHT---------TCSCHHHHHHHHHHHHHHC---C-----CHHHHHHHHHHHHHHSCCCCCCCS
T ss_pred cCCCCCHHHHHHHHHHHHc---------CCCCHHHHHHHHHHHHHhC---C-----CHHHHHHHHHHHHHhCCCCCCCCC
Confidence 3589999998888888662 4677889999999999999 5 777766544322211112221
Q ss_pred ceEEEeCCCCcccccCCCC--------------CCCC--CCC-CCcc-CcHHHHHHHHhcCCCCCHHHHHHHHHHh
Q 009838 183 DVIFIADPEGSIMGGGGSI--------------GPHY--SGN-DPRE-MRLVGALREVLAGGHLGYEEVQGVLRDV 240 (524)
Q Consensus 183 ~~~f~a~p~G~iMg~~~~~--------------g~~~--~~~-~~~~-m~l~~~L~kL~~G~~Ls~eEA~~a~~~I 240 (524)
++.=+++.-|+ +.++ |+.- .++ .... .--.+.|+.++-.-+++.+|+.+.++..
T Consensus 72 ~~vD~~gTGGd----g~~tfNiSt~~a~v~Aa~Gv~V~kHGnr~~ss~~GsaDvLeaLG~~~~~~~~~~~~~l~~~ 143 (329)
T 2elc_A 72 PLLDIVGTGGD----GKGLMNLSTLAALVAAAGGVAVAKHGNRAASSRAGSADLLEALGVDLEAPPERVGEAIEEL 143 (329)
T ss_dssp SEEEEEECCCC----SSCCCCCHHHHHHHHHHTTCEEEEEECCCTTTTCSHHHHHHHTTCCTTCCHHHHHHHHHHH
T ss_pred CeeEEcCCCCC----CCCccccHHHHHHHHHhCCCCEEEeCCCCCCCcccHHHHHHhCCCCCCCCHHHHHHHHHHC
Confidence 22222322222 1121 1100 011 1111 1156788887666678888888888875
No 34
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=74.36 E-value=0.87 Score=42.12 Aligned_cols=55 Identities=22% Similarity=0.136 Sum_probs=34.2
Q ss_pred hhhhccceeeCCCCCCCCChhhhhhhHHH---HHHHhhcCCCccc-cccHHHHhHHHHhhhhcc
Q 009838 93 LLEAQAKVCTGPTQTRPLREDEAFKVLDT---ILRSAKGDLKDEE-EVSKAQLGAFFSAMTIRA 152 (524)
Q Consensus 93 ~~~~~~~v~~gp~~~~P~~~~~a~~~~~~---~l~~~~~~l~~~~-~~~~~q~gaffga~~~r~ 152 (524)
+.++. .|++ ||++.|- ++.+.++. |-.-.....|++| |+|+|.|...+|+.+.++
T Consensus 38 l~~~D-~lil-PG~g~~~---~~~~~~~~~~~i~~~~~~~~PvlGIClG~QlL~~~~g~~~~~~ 96 (211)
T 4gud_A 38 VLAAD-KLFL-PGVGTAS---EAMKNLTERDLIELVKRVEKPLLGICLGMQLLGKLSEEKGQKA 96 (211)
T ss_dssp HHHCS-EEEE-CCCSCHH---HHHHHHHHTTCHHHHHHCCSCEEEETHHHHTTSSEECCC----
T ss_pred HhCCC-EEEE-CCCCCHH---HHHHHHHhcChHHHHHHcCCCEEEEchhHhHHHHHhCCccccc
Confidence 33443 3555 8887775 55555442 2222345789999 999999999999877664
No 35
>1o17_A Anthranilate PRT, anthranilate phosphoribosyltransferase, TRPD; nucleoside-phosphorylases; 2.05A {Sulfolobus solfataricus} SCOP: a.46.2.1 c.27.1.1 PDB: 1gxb_A 1zxy_A* 1zyk_A* 2gvq_A* 3gbr_A*
Probab=70.84 E-value=33 Score=35.04 Aligned_cols=113 Identities=18% Similarity=0.131 Sum_probs=65.1
Q ss_pred CCCCChhhhhhhHHHHHHHhhcCCCccccccHHHHhHHHHhhhhccccCCCCCcCCHHHHHHHHhhhhHhhhhCCCc-eE
Q 009838 107 TRPLREDEAFKVLDTILRSAKGDLKDEEEVSKAQLGAFFSAMTIRANAFPEATQWSEGERRAMNTFWPLLMRALPPD-VI 185 (524)
Q Consensus 107 ~~P~~~~~a~~~~~~~l~~~~~~l~~~~~~~~~q~gaffga~~~r~~~~~~~~~~s~~e~~~~~~~~~~l~~~lp~~-~~ 185 (524)
+++|+.|||..+++.|+. |.++..|+|||+-|+-+|+ . |.+|-+.+..--......++.+ +.
T Consensus 13 g~~Lt~eEa~~~~~~i~~---------g~~~~~QiaAfL~alr~kg---e-----t~eEiag~~~am~~~~~~~~~~~~v 75 (345)
T 1o17_A 13 KSDLEINEAEELAKAIIR---------GEVPEILVSAILVALRMKG---E-----SKNEIVGFARAMRELAIKIDVPNAI 75 (345)
T ss_dssp TCCCCHHHHHHHHHHHHT---------TCSCHHHHHHHHHHHHHHC---C-----CHHHHHHHHHHHHHHSCCCCCTTCE
T ss_pred CCCCCHHHHHHHHHHHHc---------CCCCHHHHHHHHHHHHHhC---C-----CHHHHHHHHHHHHHhCCCCCCCCce
Confidence 589999999888888663 4677789999999999999 5 7777665443322221223322 21
Q ss_pred EEeCCCCcccccCCCC------------CCCC---CCCC-Ccc-CcHHHHHHHHhcCCCCCHHHHHHHHHHh
Q 009838 186 FIADPEGSIMGGGGSI------------GPHY---SGND-PRE-MRLVGALREVLAGGHLGYEEVQGVLRDV 240 (524)
Q Consensus 186 f~a~p~G~iMg~~~~~------------g~~~---~~~~-~~~-m~l~~~L~kL~~G~~Ls~eEA~~a~~~I 240 (524)
=+++.-|+ +.++ +--. .+++ ... .--.+.|+.++-.-+++.+|+.+.++..
T Consensus 76 D~~gTGGd----g~~tfNiSt~~A~v~Aa~v~VaKHGnR~~ss~~GsaDvLEaLGv~~~~~~e~~~~~l~~~ 143 (345)
T 1o17_A 76 DTAGTGGD----GLGTVNVSTASAILLSLVNPVAKHGNRAVSGKSGSADVLEALGYNIIVPPERAKELVNKT 143 (345)
T ss_dssp ECCC--------CCCBCCHHHHHHHHHTTTSCEEEEECCCSSSSCSHHHHHHHHTBCCCCCHHHHHHHHHHH
T ss_pred eeCCCCCC----CCCccchHHHHHHHHHHcCCEEEECCCCCCCcccHHHHHHhCCCCCCCCHHHHHHHHHHc
Confidence 12222222 1111 0000 0111 111 1156778887766788888888888775
No 36
>3r88_A Anthranilate phosphoribosyltransferase; anthranilic acids, M tryptophan, inhibitor, magnesium binding phosp pyrophosphate; HET: PRP 14F; 1.73A {Mycobacterium tuberculosis} PDB: 3qqs_A 3qs8_A* 3qsa_A* 3qr9_A* 3r6c_A* 3twp_A* 1zvw_A* 2bpq_A
Probab=60.75 E-value=8.1 Score=40.10 Aligned_cols=114 Identities=25% Similarity=0.316 Sum_probs=68.2
Q ss_pred CCCCCChhhhhhhHHHHHHHhhcCCCccccccHHHHhHHHHhhhhccccCCCCCcCCHHHHHHHHhhhhHhh-----hhC
Q 009838 106 QTRPLREDEAFKVLDTILRSAKGDLKDEEEVSKAQLGAFFSAMTIRANAFPEATQWSEGERRAMNTFWPLLM-----RAL 180 (524)
Q Consensus 106 ~~~P~~~~~a~~~~~~~l~~~~~~l~~~~~~~~~q~gaffga~~~r~~~~~~~~~~s~~e~~~~~~~~~~l~-----~~l 180 (524)
.++.|+.|||..+++.|+. |.++..|+|||+-|+-+|+ . |.+|-+.+..--.... ...
T Consensus 35 ~g~~Ls~eEa~~~~~~i~~---------G~~~~~QiaAfL~Alr~kG---e-----t~eEi~g~~~am~~~~~~v~~~~~ 97 (377)
T 3r88_A 35 DNRDLARGQAAWAMDQIMT---------GNARPAQIAAFAVAMTMKA---P-----TADEVGELAGVMLSHAHPLPADTV 97 (377)
T ss_dssp TTCCCCTTHHHHHHHHHHT---------TCSCHHHHHHHHHHHHHHC---C-----CHHHHHHHHHHHHHHSCCCCTTCS
T ss_pred CCCCCCHHHHHHHHHHHHC---------CCCCHHHHHHHHHHHHHhC---c-----CHHHHHHHHHHHHHhCCcCCCccC
Confidence 4689999998888888653 3667789999999999999 6 7777665443322211 223
Q ss_pred CCceEEEeCCCCcccccCCCC--------------CCCC--CCC-CCccC-cHHHHHHHHhcCCCCCHHHHHHHHHHh
Q 009838 181 PPDVIFIADPEGSIMGGGGSI--------------GPHY--SGN-DPREM-RLVGALREVLAGGHLGYEEVQGVLRDV 240 (524)
Q Consensus 181 p~~~~f~a~p~G~iMg~~~~~--------------g~~~--~~~-~~~~m-~l~~~L~kL~~G~~Ls~eEA~~a~~~I 240 (524)
|.++.-++..=|+ +.++ |+.- .++ ..... --.+.|+.|+-.-+|+.+++++.++.+
T Consensus 98 ~~~~vD~~gTGGd----g~~T~niSt~~A~v~Aa~Gv~VaKHGnR~~ss~~GsaDvLEaLGv~~~l~~e~~~~~l~~~ 171 (377)
T 3r88_A 98 PDDAVDVVGTGGD----GVNTVNLSTMAAIVVAAAGVPVVKHGNRAASSLSGGADTLEALGVRIDLGPDLVARSLAEV 171 (377)
T ss_dssp CTTCEEEEECCCC----SCCBCCHHHHHHHHHHHTTCCEEEEECCCSSSSCCHHHHHHHTTCCCCCCHHHHHHHHHHH
T ss_pred CCCCeEEeCCCCC----CcCccccHHHHHHHHHhcCCeEEeECCCCCCCcccHHHHHHHcCCCcccchHHHHHHHHHh
Confidence 3334333322221 1111 2200 011 11111 145788888655688999999988876
No 37
>4hkm_A Anthranilate phosphoribosyltransferase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; HET: MSE CXS; 1.95A {Xanthomonas campestris PV}
Probab=59.75 E-value=9.7 Score=38.86 Aligned_cols=49 Identities=27% Similarity=0.443 Sum_probs=38.6
Q ss_pred CCCCCChhhhhhhHHHHHHHhhcCCCccccccHHHHhHHHHhhhhccccCCCCCcCCHHHHHHHHh
Q 009838 106 QTRPLREDEAFKVLDTILRSAKGDLKDEEEVSKAQLGAFFSAMTIRANAFPEATQWSEGERRAMNT 171 (524)
Q Consensus 106 ~~~P~~~~~a~~~~~~~l~~~~~~l~~~~~~~~~q~gaffga~~~r~~~~~~~~~~s~~e~~~~~~ 171 (524)
.+|.|+.|||..+++.|+. |.++..|+|||+-|+-+|+ . |.+|-+.+..
T Consensus 15 ~~~~Lt~eEa~~~~~~il~---------G~~~d~QiaAfL~alr~kg---e-----t~eEi~g~~~ 63 (346)
T 4hkm_A 15 EHREIFHDEMVDLMRQIMR---------GEVSDAMVSAILTGLRVKK---E-----TIGEIAGAAT 63 (346)
T ss_dssp TTCCCCHHHHHHHHHHHHT---------TCSCHHHHHHHHHHHHHHC---C-----CHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHC---------CCCCHHHHHHHHHHHHHHC---c-----CHHHHHHHHH
Confidence 4689999998888888653 3667789999999999999 5 7777665443
No 38
>3d54_D Phosphoribosylformylglycinamidine synthase 1; alpha-beta structure, ATP-binding, cytoplasm, ligase, nucleotide-binding, purine biosynthesis; HET: CYG ADP; 3.50A {Thermotoga maritima}
Probab=58.96 E-value=2 Score=39.51 Aligned_cols=94 Identities=11% Similarity=-0.023 Sum_probs=54.5
Q ss_pred hhHHHHHHHh-hcCCCccc-cccHHHHhHH--HHhhhhccccCCCCCcCCHHHHH-----HHHhhhh--H-hh---h---
Q 009838 117 KVLDTILRSA-KGDLKDEE-EVSKAQLGAF--FSAMTIRANAFPEATQWSEGERR-----AMNTFWP--L-LM---R--- 178 (524)
Q Consensus 117 ~~~~~~l~~~-~~~l~~~~-~~~~~q~gaf--fga~~~r~~~~~~~~~~s~~e~~-----~~~~~~~--~-l~---~--- 178 (524)
..++. |+++ ....|+++ |.|+|.|+.+ +++.+.+....+.|..|.+-+.. ..+.++. . .+ .
T Consensus 67 ~~~~~-l~~~~~~~~pilgIC~G~qlLa~aGll~g~v~~~~~~~~~~g~~~v~~~~~~~~l~~~~~~~~~~~~~~~H~~~ 145 (213)
T 3d54_D 67 KIAFE-IAKAAERGKLIMGICNGFQILIEMGLLKGALLQNSSGKFICKWVDLIVENNDTPFTNAFEKGEKIRIPIAHGFG 145 (213)
T ss_dssp TTHHH-HHHHHHHTCEEEECHHHHHHHHHHTSSCSEEECCSSSSCBCCEEEEEECCCSSTTSTTSCTTCEEEEECCBSSC
T ss_pred HHHHH-HHHHHHCCCEEEEECHHHHHHHHcCCCCCCeecCCCCceEeeeEEEEeCCCCCceeeccCCCCEEEEEeecCce
Confidence 34555 5554 46789999 9999999999 88887765211225666532211 1111111 0 11 1
Q ss_pred --hC-CCceEEEe-CCC--C---cccccCCCC----CCCCCCCCCc
Q 009838 179 --AL-PPDVIFIA-DPE--G---SIMGGGGSI----GPHYSGNDPR 211 (524)
Q Consensus 179 --~l-p~~~~f~a-~p~--G---~iMg~~~~~----g~~~~~~~~~ 211 (524)
.+ |+.+.++| +++ | .|+|+.++. |++|.|....
T Consensus 146 s~~~~~~~~~~~a~~~~~ng~~~~i~a~~~~~~~~~gvQfHPE~~~ 191 (213)
T 3d54_D 146 RYVKIDDVNVVLRYVKDVNGSDERIAGVLNESGNVFGLMPHPERAV 191 (213)
T ss_dssp EEECSSCCEEEEEESSCSSCCGGGEEEEECSSSCEEEECSCSTTTT
T ss_pred EEEecCCCcEEEEEcCCCCCCccceeEEEcCCCCEEEEeCCHHHhc
Confidence 12 45555665 434 6 799987743 7788776554
No 39
>1vqu_A Anthranilate phosphoribosyltransferase 2; 17130499, structur genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI; 1.85A {Nostoc SP}
Probab=56.84 E-value=11 Score=38.92 Aligned_cols=47 Identities=23% Similarity=0.331 Sum_probs=37.9
Q ss_pred CCCCChhhhhhhHHHHHHHhhcCCCccccccHHHHhHHHHhhhhccccCCCCCcCCHHHHHHHH
Q 009838 107 TRPLREDEAFKVLDTILRSAKGDLKDEEEVSKAQLGAFFSAMTIRANAFPEATQWSEGERRAMN 170 (524)
Q Consensus 107 ~~P~~~~~a~~~~~~~l~~~~~~l~~~~~~~~~q~gaffga~~~r~~~~~~~~~~s~~e~~~~~ 170 (524)
+++|+.|||..+++.|+. |.++..|+|||+-|+-+|+ . |.+|-+.+.
T Consensus 37 G~~Lt~eEa~~~~~~il~---------G~~~~~QiaAfL~Alr~kG---e-----t~eEiag~~ 83 (374)
T 1vqu_A 37 GESLSRSQAAELMQGWLS---------EAVPPELSGAILTALNFKG---V-----SADELTGMA 83 (374)
T ss_dssp TCCCCHHHHHHHHHHHHT---------TCSCHHHHHHHHHHHHHHC---C-----CHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHc---------CCCCHHHHHHHHHHHHHhC---C-----CHHHHHHHH
Confidence 489999998888888662 4677789999999999999 5 777765444
No 40
>1khd_A Anthranilate phosphoribosyltransferase; type 3 PRT fold, nucleotide binding fold; 1.86A {Pectobacterium carotovorum} SCOP: a.46.2.1 c.27.1.1 PDB: 1kgz_A
Probab=56.05 E-value=10 Score=38.78 Aligned_cols=48 Identities=21% Similarity=0.403 Sum_probs=38.0
Q ss_pred CCCCChhhhhhhHHHHHHHhhcCCCccccccHHHHhHHHHhhhhccccCCCCCcCCHHHHHHHHh
Q 009838 107 TRPLREDEAFKVLDTILRSAKGDLKDEEEVSKAQLGAFFSAMTIRANAFPEATQWSEGERRAMNT 171 (524)
Q Consensus 107 ~~P~~~~~a~~~~~~~l~~~~~~l~~~~~~~~~q~gaffga~~~r~~~~~~~~~~s~~e~~~~~~ 171 (524)
+++|+.|||..+++.|+. |.++..|+|||+-|+-+|+ . |.+|-+.+..
T Consensus 23 g~~Lt~eEa~~~~~~il~---------g~~~~~QiaAfL~alr~kg---e-----t~eEiag~~~ 70 (345)
T 1khd_A 23 SQSMTQEESHQLFAAIVR---------GELEDSQLAAALISMKMRG---E-----RPEEIAGAAS 70 (345)
T ss_dssp TCCCCHHHHHHHHHHHTT---------TCSCHHHHHHHHHHHHHHC---C-----CHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHc---------CCCCHHHHHHHHHHHHHhC---C-----CHHHHHHHHH
Confidence 489999998888887552 4677889999999999999 5 7777665443
No 41
>3ol3_A Putative uncharacterized protein; tuberculosis, RV0543C, ortholog, iodide ION S phasing, structural genomics; HET: PG4 PGE; 1.95A {Mycobacterium smegmatis} PDB: 3ol4_A
Probab=50.64 E-value=79 Score=27.54 Aligned_cols=71 Identities=11% Similarity=0.062 Sum_probs=52.3
Q ss_pred CCccCcHHHHHHHHhcCCCCCHHHHHHHHHHhccCccCCCCC-CCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhh
Q 009838 209 DPREMRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAP-GVSESLLSAFLIGQRMNRETDRELKAYCLAFDDE 284 (524)
Q Consensus 209 ~~~~m~l~~~L~kL~~G~~Ls~eEA~~a~~~IL~~~~~~~~G-~~s~~QigAFLiaLR~KGET~eELaG~a~Amre~ 284 (524)
.-+......+|.-|.+ .||.+|..++...++. +...+ .++...|+.+.+...-.-.|++||.-...-+-..
T Consensus 27 GVP~~Dy~PLlALL~R--~Ltddev~~Va~~L~~---~~~~~~pi~~~dI~~~It~vT~~~P~~eDi~RV~arLaa~ 98 (107)
T 3ol3_A 27 GVPPKDYFALLALLKR--SLTEDEVVRAAQAILR---STDGQSPVTDDDIRNAVHQIIEKEPTAEEINQVAARLASV 98 (107)
T ss_dssp CBCGGGHHHHHHHHTC--CCCHHHHHHHHHHHHH---HCCSSSCBCHHHHHHHHHHHHSSCCCHHHHHHHHHHHHTT
T ss_pred CCCCCccHHHHHHhcc--cCCHHHHHHHHHHHHh---ccCCCCCCCHHHHHHHHHHHhcCCcCHHHHHHHHHHHHhc
Confidence 3445556666654433 4999999999999982 11112 3899999999999999999999998877666544
No 42
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1
Probab=49.98 E-value=3.3 Score=38.08 Aligned_cols=52 Identities=13% Similarity=-0.083 Sum_probs=33.9
Q ss_pred ceeeCCCCCCCCChhh---hhhhHHHHHHHh-hcCCCccc-cccHHHHhHH---HH---------hhhhcc
Q 009838 99 KVCTGPTQTRPLREDE---AFKVLDTILRSA-KGDLKDEE-EVSKAQLGAF---FS---------AMTIRA 152 (524)
Q Consensus 99 ~v~~gp~~~~P~~~~~---a~~~~~~~l~~~-~~~l~~~~-~~~~~q~gaf---fg---------a~~~r~ 152 (524)
.|++ ||++.|.+.-. .....+. ||++ ...+|++| |.|+|.|+.. || +.+.+.
T Consensus 43 ~lil-~G~g~~~~~~~~l~~~~~~~~-i~~~~~~~~PilGIC~G~Qll~~~~~~~Gg~~~l~~~~g~v~~~ 111 (200)
T 1ka9_H 43 LLVL-PGQGHFGQVMRAFQESGFVER-VRRHLERGLPFLGICVGMQVLYEGSEEAPGVRGLGLVPGEVRRF 111 (200)
T ss_dssp EEEE-CCCSCHHHHHHTTSSSCTHHH-HHHHHHTTCCEEECTHHHHTTSSEETTSTTCCCCCSSSSEEEEC
T ss_pred EEEE-CCCCcHHHHHHHHHhcCHHHH-HHHHHHcCCeEEEEcHHHHHHHHhccccCCcCCccccccEEEEC
Confidence 3555 77666541100 0224555 6654 56799999 9999999999 78 666655
No 43
>2ywj_A Glutamine amidotransferase subunit PDXT; uncharacterized conserved protein, structural genomics; 1.90A {Methanocaldococcus jannaschii}
Probab=48.49 E-value=3.9 Score=36.95 Aligned_cols=110 Identities=10% Similarity=0.078 Sum_probs=63.3
Q ss_pred hhccceeeCCCCCCCCChhh-hhhhHHHHHHHhhcCCCccc-cccHHHHhHHHHhhhhccccCCCCCcCCHHH---H---
Q 009838 95 EAQAKVCTGPTQTRPLREDE-AFKVLDTILRSAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWSEGE---R--- 166 (524)
Q Consensus 95 ~~~~~v~~gp~~~~P~~~~~-a~~~~~~~l~~~~~~l~~~~-~~~~~q~gaffga~~~r~~~~~~~~~~s~~e---~--- 166 (524)
+.--.|++++++..+.++.. ....++. ++ ...+|++| |+|+|.|+..+|+.+-.-..+ +++.+... +
T Consensus 36 ~~~dglil~GG~~~~~~~~~~~~~~~~~-i~--~~~~PilGIC~G~Qll~~~~gg~~~~lg~~--~~~~~~~~~~~~~~~ 110 (186)
T 2ywj_A 36 EGIDALIIPGGESTAIGKLMKKYGLLEK-IK--NSNLPILGTCAGMVLLSKGTGINQILLELM--DITVKRNAYGRQVDS 110 (186)
T ss_dssp TTCSEEEECCSCHHHHHHHHHHTTHHHH-HH--TCCCCEEEETHHHHHHSSCCSSCCCCCCCS--SEEEETTTTCSSSCC
T ss_pred ccCCEEEECCCCchhhhhhhhccCHHHH-HH--hcCCcEEEECHHHHHHHHHhCCCcCccCCC--ceeEEeccCCCcccc
Confidence 33356888888765542211 1124455 55 56799999 999999999999874211111 11111000 0
Q ss_pred -------HHHHhh----hhH-hhhhC-CCceEEEeCCCCcccccCCCC--CCCCCCCC
Q 009838 167 -------RAMNTF----WPL-LMRAL-PPDVIFIADPEGSIMGGGGSI--GPHYSGND 209 (524)
Q Consensus 167 -------~~~~~~----~~~-l~~~l-p~~~~f~a~p~G~iMg~~~~~--g~~~~~~~ 209 (524)
..+..+ +-. .+..+ |+.+.++|..||.++|++++. |++|.|..
T Consensus 111 ~~~~~~~~~~~~~~~~~~H~~~v~~l~~~~~~v~a~sd~~~~a~~~~~~~gvQfHPE~ 168 (186)
T 2ywj_A 111 FEKEIEFKDLGKVYGVFIRAPVVDKILSDDVEVIARDGDKIVGVKQGKYMALSFHPEL 168 (186)
T ss_dssp EEEEEEETTTEEEEEEESSCCEEEEECCTTCEEEEEETTEEEEEEETTEEEESSCGGG
T ss_pred eecccccccCCcEEEEEEecceeeecCCCCeEEEEEECCEEEEEeeCCEEEEECCCCc
Confidence 000000 000 01467 889999984489999999875 78886653
No 44
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=48.20 E-value=14 Score=40.20 Aligned_cols=53 Identities=8% Similarity=-0.099 Sum_probs=39.0
Q ss_pred hhhccceeeCCCCCCCCChhhhhhhHHHHHHHhh-cCCCccc-cccHHHHhHHHHhhhhc
Q 009838 94 LEAQAKVCTGPTQTRPLREDEAFKVLDTILRSAK-GDLKDEE-EVSKAQLGAFFSAMTIR 151 (524)
Q Consensus 94 ~~~~~~v~~gp~~~~P~~~~~a~~~~~~~l~~~~-~~l~~~~-~~~~~q~gaffga~~~r 151 (524)
|+.--.|++.++++.|- ..+ .++. +|.++ ..+|.+| |+|+|.+...||+.+.+
T Consensus 348 L~~~DgIIlpGG~G~~~---~~g-~i~~-ir~a~~~~~PiLGIClG~Qll~va~Gg~v~g 402 (535)
T 3nva_A 348 LGNVNGIIVLPGFGSRG---AEG-KIKA-IKYAREHNIPFLGICFGFQLSIVEFARDVLG 402 (535)
T ss_dssp TTSCSEEEECCCCSSTT---HHH-HHHH-HHHHHHHTCCEEEETHHHHHHHHHHHHTTTC
T ss_pred ccCCCEEEECCCCCCcc---HHH-HHHH-HHHHHHcCCcEEEECcchhHHHHHhhccccC
Confidence 44444567777877764 333 3566 67765 5899999 99999999999999953
No 45
>4ex8_A ALNA; alpha/beta/alpha-domain, C-glycosynthase, divalent metal ION ligase; 2.10A {Streptomyces SP} PDB: 4ex9_A*
Probab=48.17 E-value=6.3 Score=40.28 Aligned_cols=165 Identities=11% Similarity=0.024 Sum_probs=98.7
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhCCCCCCCCCCCeeEEcCCCCCCCccccchHHHHHHHhccCCeEE
Q 009838 249 APGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVADVKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCL 328 (524)
Q Consensus 249 ~G~~s~~QigAFLiaLR~KGET~eELaG~a~Amre~~~~~~~~~~~~vDi~GTGGDG~~tfNiST~laA~VlAa~Gv~Va 328 (524)
+..+.|+-|| ++=+-=.=|.+.+||.-+++ .+...++.. .+.-..++.|.+|..|. .. .++++..+|++|.
T Consensus 61 ~~GavPATIa-i~~G~~~VGL~~~eLe~la~--~~~~~K~Sr--RDl~~~~a~g~~GaTTV---aa-Tm~lA~~AGI~VF 131 (316)
T 4ex8_A 61 GAGAVPATIG-IAGGKLVVGLTDSLIERFAS--TKGIPKISA--RDIGGALAGGGLGATTV---AG-TIVIAERAGIQVF 131 (316)
T ss_dssp TTTCEEEEEE-EETTEEEESCCHHHHHHHHH--CTTCCEECG--GGHHHHHHHCSCBEECH---HH-HHHHHHHHTCCEE
T ss_pred HcCCCcceEE-EECCEEEEcCCHHHHHHHhc--CCCccccch--hhHHHHHhCCCCccccH---HH-HHHHHHHCCCcEE
Confidence 3445554444 33333334789999998876 222222221 12223677899999872 22 5667788999999
Q ss_pred eecCCCCCCC------CCCCHHHHHHh---------CCCCCCCCHHHHHHHHHhcCCcEEEE-cccccChhhh-------
Q 009838 329 LHGAEWMPPK------GGVTEEQMLKF---------MGASTNLSVLQAKELLEDEEIGFAYV-SLREARPSLY------- 385 (524)
Q Consensus 329 KHGnRavsSk------sGSt~aDVLEa---------LGi~i~lspe~a~~~Lee~~~GfaFL-fAp~~hPam~------- 385 (524)
--|+=+-=.+ .=| +|+-|- -|++--++.....+.||. .|+..+ |.....|+++
T Consensus 132 aTGGiGGVHRgae~t~DIS--aDL~eLarTpV~VVcaG~KsILDi~~TLE~LET--~GV~Vvgy~td~fPaFy~r~Sg~~ 207 (316)
T 4ex8_A 132 TTAGIGGVHRRGEDTLDIS--PDLLQFRKTKMTVVSGGAKSILDHRLTAEYLET--AGVPVYGYRTDKLAAFVVREADVP 207 (316)
T ss_dssp ECSCBCCBBTTHHHHCCBC--THHHHTTTCCEEEEESBBCTTBCHHHHHHHHHH--TTCCEEEETCSBCCBTTBSCCSCB
T ss_pred EeCCccccCCCCCCCcchh--hhHHHhcCCCeEEEecccchhhcchHHHHHHHh--CCceEEEecCCCCceeeeCCCCCc
Confidence 9886441111 124 787773 478877899999999999 665444 5556667553
Q ss_pred -----------hHHhhhcccCCCC--ccccchhhhhhhhccCCceEEEeccCCcchHHHHHHHHHc
Q 009838 386 -----------SLIGLREHIKKRP--PVATSEKVQQFVRAQGREAIVAGFYHEGYEEPLLMLMKRR 438 (524)
Q Consensus 386 -----------~l~pvRk~LGiRT--PL~npak~~~~lNPaga~~qViGVfh~~~~~~~A~al~~l 438 (524)
.++..++.||+.. -++||.+. ++.+=+- .....+.++++..
T Consensus 208 ~pr~d~~~e~A~~~~a~~~lgl~~g~lvanPiP~---------e~~~~~~---~i~~~I~~Al~eA 261 (316)
T 4ex8_A 208 VTRMDDLHTAARAAEAHWQVNGPGTVLLTSPIDE---------QDAVDEA---IVEAAIAEALAQC 261 (316)
T ss_dssp CEEESSHHHHHHHHHHHHHHHCSCEEEEECCCCG---------GGCCCHH---HHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHhCCCCeEEEEcCCCh---------hhcCCHH---HHHHHHHHHHHHH
Confidence 4556677777776 56666443 4433222 2344556666654
No 46
>2tpt_A Thymidine phosphorylase; transferase, salvage pathway; 2.60A {Escherichia coli} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 1azy_A 1tpt_A 1otp_A
Probab=46.92 E-value=21 Score=37.93 Aligned_cols=195 Identities=12% Similarity=0.056 Sum_probs=99.2
Q ss_pred CCCCCChhhhhhhHHHHHHHhhcCCCccccccHHHHhHHHHhhhhccccCCCCCcCCHHHHHHHHhhhhHhhhhC--CC-
Q 009838 106 QTRPLREDEAFKVLDTILRSAKGDLKDEEEVSKAQLGAFFSAMTIRANAFPEATQWSEGERRAMNTFWPLLMRAL--PP- 182 (524)
Q Consensus 106 ~~~P~~~~~a~~~~~~~l~~~~~~l~~~~~~~~~q~gaffga~~~r~~~~~~~~~~s~~e~~~~~~~~~~l~~~l--p~- 182 (524)
.++.|+.||+..+++.|+. |.++..|+|||+-|+-+|+ . |.+|.+.+..--......+ |.
T Consensus 13 ~g~~Lt~eEa~~~~~~i~~---------G~~sd~QiaAfL~Alr~kG---e-----t~eEiag~~~Am~~~~~~~~~~~~ 75 (440)
T 2tpt_A 13 DGHALSDEEIRFFINGIRD---------NTISEGQIAALAMTIFFHD---M-----TMPERVSLTMAMRDSGTVLDWKSL 75 (440)
T ss_dssp TTCCCCHHHHHHHHHHHHH---------TCSCHHHHHHHHHHHHHHC---C-----CHHHHHHHHHHHHHTSBCCCCTTT
T ss_pred cCCCCCHHHHHHHHHHHHc---------CCCCHHHHHHHHHHHHHcC---C-----CHHHHHHHHHHHHHhCCcCCCccc
Confidence 4588999998888888663 4667789999999999999 5 7777665443221111122 11
Q ss_pred ----ceEEEeCCCCcccccCCCC-----------CCCC--CCCC-CccC-cHHHHHHHH-hcCCCCCHHHHHHHHHHhcc
Q 009838 183 ----DVIFIADPEGSIMGGGGSI-----------GPHY--SGND-PREM-RLVGALREV-LAGGHLGYEEVQGVLRDVLP 242 (524)
Q Consensus 183 ----~~~f~a~p~G~iMg~~~~~-----------g~~~--~~~~-~~~m-~l~~~L~kL-~~G~~Ls~eEA~~a~~~IL~ 242 (524)
.+.=+++.=|+ +.++ |+.- .+++ .... --.+.|+.| +-.-+++.+|+.+.++..=
T Consensus 76 ~~~~~~vD~~gTGGd----G~~iSt~~A~vvAa~Gv~VaKHGnR~~ss~~GsaDvLEaL~Gv~~~ls~e~~~~~l~~~G- 150 (440)
T 2tpt_A 76 HLNGPIVDKHSTGGV----GDVTSLMLGPMVAACGGYIPMISGRGLGHTGGTLDKLESIPGFDIFPDDNRFREIIKDVG- 150 (440)
T ss_dssp TCSSCBEEEEECCCS----SCCHHHHHHHHHHHTTCBEEEEECCCCTTSCCHHHHHTTSTTCCSCCCHHHHHHHHHHTS-
T ss_pred ccCCCeeeeCCCCCC----CccHHHHHHHHHHhCCCcEEEECCCCCCCcccHHHHHHhCcCCCCCCCHHHHHHHHHHcC-
Confidence 22222333333 2223 2210 0111 1111 146777777 6667899999999999751
Q ss_pred CccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHH--HHhhCCCCCCCCCCCeeE-EcCCC--CCCCccccchHHHH
Q 009838 243 LQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLA--FDDELGPPPVADVKSLTH-YGEPY--DGNTRFFRSTLFVA 317 (524)
Q Consensus 243 ~~~~~~~G~~s~~QigAFLiaLR~KGET~eELaG~a~A--mre~~~~~~~~~~~~vDi-~GTGG--DG~~tfNiST~laA 317 (524)
+-+=.......|+-- .+.++|-.=-|..-+ -++.+ |-+.+-. -.+.-++|+ +|.|. +|..........-.
T Consensus 151 ~~fl~a~~~~hPA~k--~l~~lR~~lrTvfNi-PLin~s~lskk~A~--G~~alVvdVk~G~gaf~~~~de~~~la~t~v 225 (440)
T 2tpt_A 151 VAIIGQTSSLAPADK--RFYATRDITATVDSI-PLITASILAKKLAE--GLDALVMDVKVGSGAFMPTYELSEALAEAIV 225 (440)
T ss_dssp EEEEECCTTBSHHHH--HHHHHHHHTTCCCCH-HHHHHHHHHHHHTT--CCSEEEEEEEESTTSSSSSHHHHHHHHHHHH
T ss_pred EEEEcCchhhCHHHH--HHHHHHHhhCCccCh-hhcCCHHHHHHHhc--CCCeEEEEeccCCccccCCHHHHHHHHHHHH
Confidence 111111245677533 334444332344433 22221 2222110 111235677 88763 44443322221111
Q ss_pred HHHhccCCeE
Q 009838 318 AVRSCYGESC 327 (524)
Q Consensus 318 ~VlAa~Gv~V 327 (524)
.+....|++.
T Consensus 226 ~~~~~~G~~~ 235 (440)
T 2tpt_A 226 GVANGAGVRT 235 (440)
T ss_dssp HHHHHTTCEE
T ss_pred HHHHHcCCce
Confidence 2336678765
No 47
>1brw_A PYNP, protein (pyrimidine nucleoside phosphorylase); domain movement, transferase; HET: MES; 2.10A {Geobacillus stearothermophilus} SCOP: a.46.2.1 c.27.1.1 d.41.3.1
Probab=46.58 E-value=19 Score=38.10 Aligned_cols=131 Identities=12% Similarity=0.121 Sum_probs=74.3
Q ss_pred CCCCCChhhhhhhHHHHHHHhhcCCCccccccHHHHhHHHHhhhhccccCCCCCcCCHHHHHHHH----hhhhHh-hhhC
Q 009838 106 QTRPLREDEAFKVLDTILRSAKGDLKDEEEVSKAQLGAFFSAMTIRANAFPEATQWSEGERRAMN----TFWPLL-MRAL 180 (524)
Q Consensus 106 ~~~P~~~~~a~~~~~~~l~~~~~~l~~~~~~~~~q~gaffga~~~r~~~~~~~~~~s~~e~~~~~----~~~~~l-~~~l 180 (524)
.++.|+.||+.-+++.|+. |.++..|+|||+-|+-+|+ . |.+|.+.+. ..+..+ ...+
T Consensus 12 ~g~~Lt~eEa~~~~~~i~~---------G~~sd~QiaAfL~Alr~kG---e-----t~eEiag~a~AM~~~~~~v~~~~~ 74 (433)
T 1brw_A 12 DGKALTKEEIEWIVRGYTN---------GDIPDYQMSALAMAIYFRG---M-----TEEETAALTMAMVQSGEMLDLSSI 74 (433)
T ss_dssp TTCCCCHHHHHHHHHHHHT---------TSSCHHHHHHHHHHHHHHC---C-----CHHHHHHHHHHHHHTSCCCCCTTS
T ss_pred cCCCCCHHHHHHHHHHHHc---------CCCCHHHHHHHHHHHHHhC---C-----CHHHHHHHHHHHHHhCCcCCcccc
Confidence 4789999998888888652 4677789999999999999 5 777766544 333311 0011
Q ss_pred CCceEEEeCCCCcccccCCCC---------CCCC--CCCC-Ccc-CcHHHHHHHH-hcCCCCCHHHHHHHHHHhccCccC
Q 009838 181 PPDVIFIADPEGSIMGGGGSI---------GPHY--SGND-PRE-MRLVGALREV-LAGGHLGYEEVQGVLRDVLPLQVD 246 (524)
Q Consensus 181 p~~~~f~a~p~G~iMg~~~~~---------g~~~--~~~~-~~~-m~l~~~L~kL-~~G~~Ls~eEA~~a~~~IL~~~~~ 246 (524)
+..+.=+.+.=|+ |-+-++ |+.- .+++ ... .--.+.|+.| +-.-+|+.+|+.+.++..= +-+=
T Consensus 75 ~~~~vD~~gTGGd--G~~iSt~~A~vvAa~Gv~VaKHGnRa~ss~~GsaDvLEaL~Gv~i~ls~e~~~~~l~~~G-i~fl 151 (433)
T 1brw_A 75 RGVKVDKHSTGGV--GDTTTLVLGPLVASVGVPVAKMSGRGLGHTGGTIDKLESVPGFHVEISKDEFIRLVNENG-IAII 151 (433)
T ss_dssp CSCCEEEEECCCS--SCCHHHHHHHHHHTTTCCEEEEECCCBTTBCCHHHHHTTSTTCCCCCCHHHHHHHHHHHS-EEEE
T ss_pred cCCceeeCCCCCC--CcchHHHHHHHHHhCCCcEEEECCCCCCCCCCHHHHHHHCcCceecCCHHHHHHHHHHcC-eeEe
Confidence 1123333333332 111111 2210 1111 111 1134778877 6667899999999999752 1221
Q ss_pred CCCCCCCHHH
Q 009838 247 NKAPGVSESL 256 (524)
Q Consensus 247 ~~~G~~s~~Q 256 (524)
.......|+-
T Consensus 152 ~a~~~~hPA~ 161 (433)
T 1brw_A 152 GQTGDLTPAD 161 (433)
T ss_dssp ECCTTSCHHH
T ss_pred cCchhhCHHH
Confidence 1124677753
No 48
>3h5q_A PYNP, pyrimidine-nucleoside phosphorylase; structural genomics, glycosyltransferase, transferase; HET: MSE THM; 1.94A {Staphylococcus aureus}
Probab=45.23 E-value=21 Score=37.85 Aligned_cols=144 Identities=10% Similarity=0.026 Sum_probs=79.9
Q ss_pred CCCCChhhhhhhHHHHHHHhhcCCCccccccHHHHhHHHHhhhhccccCCCCCcCCHHHHHHHHhhhhHhhhhCC-----
Q 009838 107 TRPLREDEAFKVLDTILRSAKGDLKDEEEVSKAQLGAFFSAMTIRANAFPEATQWSEGERRAMNTFWPLLMRALP----- 181 (524)
Q Consensus 107 ~~P~~~~~a~~~~~~~l~~~~~~l~~~~~~~~~q~gaffga~~~r~~~~~~~~~~s~~e~~~~~~~~~~l~~~lp----- 181 (524)
+++|+.|||...++.|+. |.++..|+|||+-|+-+|+ . |.+|.+.+..--......++
T Consensus 16 g~~Lt~eEa~~~~~~i~~---------G~~sd~QiaAfL~Alr~kG---e-----t~eEiag~~~Am~~~~~~~~~~~~~ 78 (436)
T 3h5q_A 16 GHTLTTEEINFFIGGYVK---------GDIPDYQASSLAMAIYFQD---M-----NDDERVALTMAMVNSGDMIDLSDIK 78 (436)
T ss_dssp TCCCCHHHHHHHHHHHHH---------TSSCHHHHHHHHHHHHHHC---C-----CHHHHHHHHHHHHTTSCCCCCTTSC
T ss_pred CCCCCHHHHHHHHHHHHc---------CCCCHHHHHHHHHHHHHcC---C-----CHHHHHHHHHHHHHhCCcCCccccC
Confidence 489999998888888653 3567789999999999999 4 66665544332111111221
Q ss_pred CceEEEeCCCCcccccCCCC-----------CCCC--CCCC-Ccc-CcHHHHHHHH-hcCCCCCHHHHHHHHHHhccCcc
Q 009838 182 PDVIFIADPEGSIMGGGGSI-----------GPHY--SGND-PRE-MRLVGALREV-LAGGHLGYEEVQGVLRDVLPLQV 245 (524)
Q Consensus 182 ~~~~f~a~p~G~iMg~~~~~-----------g~~~--~~~~-~~~-m~l~~~L~kL-~~G~~Ls~eEA~~a~~~IL~~~~ 245 (524)
..+.=+.+.-|+ +.++ |+.- .+++ ... .--.+.|+.| +-.-+++.+|+.+.++..= +.+
T Consensus 79 ~~~vD~~gTGGd----G~~tSt~~A~vvAa~Gv~VaKHGnRa~ss~~GsaDvLEaLpGi~~~ls~e~~~~~l~~~g-~~f 153 (436)
T 3h5q_A 79 GVKVDKHSTGGV----GDTTTLVLAPLVAAVDVPVAKMSGRGLGHTGGTIDKLEAIDGFHVEIDEATFVKLVNENK-VAV 153 (436)
T ss_dssp SCCEEEEECCCT----TCCHHHHHHHHHHHTTCCEEEECCCCSSSSCCHHHHHTTSTTCCCCCCHHHHHHHHHHHS-EEE
T ss_pred CCceeecCCCCC----CCChHHHHHHHHHhCCCCEEeECCCCCCCcccHHHHHHhCcCCCCCCCHHHHHHHHHHcC-CEE
Confidence 122222333322 1222 2210 1111 111 1145778877 6666899999999999752 212
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCCHHHH
Q 009838 246 DNKAPGVSESLLSAFLIGQRMNRETDREL 274 (524)
Q Consensus 246 ~~~~G~~s~~QigAFLiaLR~KGET~eEL 274 (524)
=.......|+- -.|.++|-.=-|.+-+
T Consensus 154 l~~a~~~~Pa~--~~l~~lR~~~~Tvfni 180 (436)
T 3h5q_A 154 VGQSGNLTPAD--KKLYALRDVTGTVNSI 180 (436)
T ss_dssp ECCCSSSCHHH--HHHHHHHHTTTCSSCH
T ss_pred EccccccCHHH--HHHHHHHhccCCcCCh
Confidence 11135677753 2345555432366555
No 49
>2dsj_A Pyrimidine-nucleoside (thymidine) phosphorylase; pyrimidine-nucleoside phosphorylase, structural genomics; 1.80A {Thermus thermophilus}
Probab=43.93 E-value=23 Score=37.53 Aligned_cols=114 Identities=19% Similarity=0.189 Sum_probs=67.9
Q ss_pred CCCCCCCChhhhhhhHHHHHHHhhcCCCccccccHHHHhHHHHhhhhccccCCCCCcCCHHHHHHHH----hhhhHhhhh
Q 009838 104 PTQTRPLREDEAFKVLDTILRSAKGDLKDEEEVSKAQLGAFFSAMTIRANAFPEATQWSEGERRAMN----TFWPLLMRA 179 (524)
Q Consensus 104 p~~~~P~~~~~a~~~~~~~l~~~~~~l~~~~~~~~~q~gaffga~~~r~~~~~~~~~~s~~e~~~~~----~~~~~l~~~ 179 (524)
...++.|+.||+..+++.|+. |.++..|+|||+-|+-+|+ . |.+|.+.+. ..+..+ .
T Consensus 10 ~~~g~~Lt~eEa~~~~~~i~~---------G~~~d~QiaAfL~Al~~kG---e-----t~eEiag~a~aM~~~~~~l--~ 70 (423)
T 2dsj_A 10 KREGKKHRREDLEAFLLGYLR---------DEVPDYQVSAWLMAAFLRG---L-----DPEETLWLTETMARSGKVL--D 70 (423)
T ss_dssp HHTTCCCCHHHHHHHHHHHHT---------TCSCHHHHHHHHHHHHHHC---C-----CHHHHHHHHHHHHTSSBCC--C
T ss_pred HhcCCCCCHHHHHHHHHHHHc---------CCCCHHHHHHHHHHHHHhC---C-----CHHHHHHHHHHHHHhCCcC--C
Confidence 346789999998887777542 3667789999999999999 6 777766554 333311 1
Q ss_pred CCC--ceEEEeCCCCcccccCCCC-----------CCCC--CCC-CCccC-cHHHHHHHH-hcCCCCCHHHHHHHHHHh
Q 009838 180 LPP--DVIFIADPEGSIMGGGGSI-----------GPHY--SGN-DPREM-RLVGALREV-LAGGHLGYEEVQGVLRDV 240 (524)
Q Consensus 180 lp~--~~~f~a~p~G~iMg~~~~~-----------g~~~--~~~-~~~~m-~l~~~L~kL-~~G~~Ls~eEA~~a~~~I 240 (524)
+|. .+.=+++.=|+ |. ++ |+.= .++ ..... --.+.|+.| +-.-+++.||+.+.++.+
T Consensus 71 ~~~~~~~vD~~gTGGd--G~--niSt~~a~vvAa~Gv~VaKhGnR~~ss~~GsaDvLEaL~Gv~i~l~~e~~~~~l~~~ 145 (423)
T 2dsj_A 71 LSGLPHPVDKHSSGGV--GD--KVSLVVGPILAASGCTFAKMSGRGLAHTGGTIDKLESVPGWRGEMTEAEFLERARRV 145 (423)
T ss_dssp CTTSSSBEEEEEESSS--CC--STHHHHHHHHHTTTCBEEEECCCCBTTBCCHHHHHTTSTTCCCCCCHHHHHHHHHHT
T ss_pred ccccCCceeEecCCCC--Cc--cHHHHHHHHHHhCCCcEEEECCCCCCCCccHHHHHHhCCCCCCCCCHHHHHHHHHHc
Confidence 111 11111222222 21 23 2200 111 11111 155778877 666789999999999986
No 50
>1gpw_B Amidotransferase HISH; lyase/transferase, complex (lyase/transferase), histidine biosynthesis, glutaminase, glutamine amidotransferase; 2.4A {Thermotoga maritima} SCOP: c.23.16.1 PDB: 1k9v_F 1kxj_A 2wjz_B
Probab=43.68 E-value=6 Score=36.20 Aligned_cols=46 Identities=9% Similarity=-0.078 Sum_probs=29.9
Q ss_pred ceeeCCCCCCCCChhhhh---hhHHHHHHHh-hcCCCccc-cccHHHHhHHHH
Q 009838 99 KVCTGPTQTRPLREDEAF---KVLDTILRSA-KGDLKDEE-EVSKAQLGAFFS 146 (524)
Q Consensus 99 ~v~~gp~~~~P~~~~~a~---~~~~~~l~~~-~~~l~~~~-~~~~~q~gaffg 146 (524)
.|++ ||++.|....... ..++. |+++ ...+|++| |+|+|.|+..+|
T Consensus 45 glil-pG~g~~~~~~~~l~~~~~~~~-i~~~~~~~~PilGIC~G~Qll~~~~g 95 (201)
T 1gpw_B 45 LLFI-PGVGHFGEGMRRLRENDLIDF-VRKHVEDERYVVGVCLGMQLLFEESE 95 (201)
T ss_dssp EEEE-CCCSCSHHHHHHHHHTTCHHH-HHHHHHTTCEEEEETHHHHTTSSEET
T ss_pred EEEE-CCCCcHHHHHHHHHhhCHHHH-HHHHHHcCCeEEEEChhHHHHHHhhc
Confidence 3555 6666654110100 14455 6666 56799999 999999999986
No 51
>1uou_A Thymidine phosphorylase; transferase, glycosyltransferase, chemotaxis, angiogenesis; HET: CMU; 2.11A {Homo sapiens} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 2wk6_A 2wk5_A 2j0f_A
Probab=43.68 E-value=25 Score=37.76 Aligned_cols=145 Identities=15% Similarity=0.125 Sum_probs=81.5
Q ss_pred CCCCCChhhhhhhHHHHHHHhhcCCCccccccHHHHhHHHHhhhhccccCCCCCcCCHHHHHHHHhhhhHhhhhC--CC-
Q 009838 106 QTRPLREDEAFKVLDTILRSAKGDLKDEEEVSKAQLGAFFSAMTIRANAFPEATQWSEGERRAMNTFWPLLMRAL--PP- 182 (524)
Q Consensus 106 ~~~P~~~~~a~~~~~~~l~~~~~~l~~~~~~~~~q~gaffga~~~r~~~~~~~~~~s~~e~~~~~~~~~~l~~~l--p~- 182 (524)
.++.|+.||+.-+++.|+. |.++..|+|||+-|+-+|+ . |.+|.+.+..--......+ |.
T Consensus 39 ~g~~Lt~eEa~~~~~~i~~---------G~~sd~QiaAfLmAlr~kG---e-----T~eEiag~a~AMr~~~~~v~~~~~ 101 (474)
T 1uou_A 39 DGGRLSEADIRGFVAAVVN---------GSAQGAQIGAMLMAIRLRG---M-----DLEETSVLTQALAQSGQQLEWPEA 101 (474)
T ss_dssp TTCCCCHHHHHHHHHHHHH---------TCSCHHHHHHHHHHHHHHC---C-----CHHHHHHHHHHHHTTSCCCCCCGG
T ss_pred cCCCCCHHHHHHHHHHHHc---------CCCCHHHHHHHHHHHHHhC---C-----CHHHHHHHHHHHHHhCCcCCcccc
Confidence 5789999998888888653 4667789999999999999 5 7777665443211111122 21
Q ss_pred ---ceEEEeCCCCcccccCCCC-----------CCCC--CCCC-CccC-cHHHHHHHH-hcCCCCCHHHHHHHHHHhccC
Q 009838 183 ---DVIFIADPEGSIMGGGGSI-----------GPHY--SGND-PREM-RLVGALREV-LAGGHLGYEEVQGVLRDVLPL 243 (524)
Q Consensus 183 ---~~~f~a~p~G~iMg~~~~~-----------g~~~--~~~~-~~~m-~l~~~L~kL-~~G~~Ls~eEA~~a~~~IL~~ 243 (524)
.+.=+++.=|+ +.++ |+.- .+++ .... --.+.|+.| +-.-+|+.+|+.+.++.+= +
T Consensus 102 ~~~~~vD~~gTGGd----G~~iSt~~A~vvAa~Gv~VaKHGnRa~ss~~GSaDvLEaLpGv~i~ls~e~~~~~l~~~G-i 176 (474)
T 1uou_A 102 WRQQLVDKHSTGGV----GDKVSLVLAPALAACGCKVPMISGRGLGHTGGTLDKLESIPGFNVIQSPEQMQVLLDQAG-C 176 (474)
T ss_dssp GGGGBEEEEESCCT----TCCHHHHHHHHHHTTTCBEEEECCCCBTTBCCHHHHHTTSTTCCCCCCHHHHHHHHHHHS-E
T ss_pred cCCCeeEeCCCCCC----CceeHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHhCCCCCCCCCHHHHHHHHHHcC-e
Confidence 23323333332 1122 2210 1111 1111 145778888 6677899999999999752 1
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHhcCCCHHHH
Q 009838 244 QVDNKAPGVSESLLSAFLIGQRMNRETDREL 274 (524)
Q Consensus 244 ~~~~~~G~~s~~QigAFLiaLR~KGET~eEL 274 (524)
-+=.......|+-- .|.++|-.=-|..-+
T Consensus 177 ~fl~a~~~~hPA~k--~l~~lR~~lrTvfNi 205 (474)
T 1uou_A 177 CIVGQSEQLVPADG--ILYAARDVTATVDSL 205 (474)
T ss_dssp EEECCCSSSSHHHH--HHHHHHHHTTCSSCH
T ss_pred EEecCchhhCHHHH--HHHHHHhhhCCccch
Confidence 11111245777543 335555432344443
No 52
>1j8m_F SRP54, signal recognition 54 kDa protein; signaling protein; 2.00A {Acidianus ambivalens} SCOP: a.24.13.1 c.37.1.10 PDB: 1j8y_F
Probab=43.34 E-value=2.5e+02 Score=27.51 Aligned_cols=157 Identities=17% Similarity=0.135 Sum_probs=87.6
Q ss_pred cHHHHHHHHhcCCCCCHHHHH----HHHHHhccCccCCCCCCCCHHHHHHHHHHHHhc--------CCCHHH-H-HHHHH
Q 009838 214 RLVGALREVLAGGHLGYEEVQ----GVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMN--------RETDRE-L-KAYCL 279 (524)
Q Consensus 214 ~l~~~L~kL~~G~~Ls~eEA~----~a~~~IL~~~~~~~~G~~s~~QigAFLiaLR~K--------GET~eE-L-aG~a~ 279 (524)
.+...++++.....|+.+... ++-+.++ ..++...-.-.|+-.++-+ +.++.+ + ....+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~-------~~dv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (297)
T 1j8m_F 6 NLRDTVRKFLTGSSSYDKAVEDFIKELQKSLI-------SADVNVKLVFSLTNKIKERLKNEKPPTYIERREWFIKIVYD 78 (297)
T ss_dssp HHHHHHHHHHSCCSCHHHHHHHHHHHHHHHHH-------HTTCCHHHHHHHHHHHHHHHHHCCCCTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHH-------HcCCCHHHHHHHHHHHHHHHhhccccccCChHHHHHHHHHH
Confidence 367788999887889985444 4444556 6778888888888777653 234433 2 33444
Q ss_pred HHHhhCCC-----CCCC-CCCCeeEEcCCCCCCCccccchHHHHHHHhccCCeEEeecCCCCCCCCCC--CHHHHHHhCC
Q 009838 280 AFDDELGP-----PPVA-DVKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGV--TEEQMLKFMG 351 (524)
Q Consensus 280 Amre~~~~-----~~~~-~~~~vDi~GTGGDG~~tfNiST~laA~VlAa~Gv~VaKHGnRavsSksGS--t~aDVLEaLG 351 (524)
.+...... +... ....+-++|.+|.|++|+-. . .|..++..|.+|..-+.+-..+ ++ .+....+..|
T Consensus 79 ~l~~~~~~~~~~~i~~~~~~~vi~i~G~~G~GKTT~~~--~-la~~~~~~g~~v~l~~~D~~r~--~a~~ql~~~~~~~~ 153 (297)
T 1j8m_F 79 ELSNLFGGDKEPKVIPDKIPYVIMLVGVQGTGKTTTAG--K-LAYFYKKKGFKVGLVGADVYRP--AALEQLQQLGQQIG 153 (297)
T ss_dssp HHHHHTTCSCCCCCSCSSSSEEEEEECSSCSSTTHHHH--H-HHHHHHHTTCCEEEEECCCSSS--HHHHHHHHHHHHHT
T ss_pred HHHHHhccccccccccCCCCeEEEEECCCCCCHHHHHH--H-HHHHHHHCCCeEEEEecCCCCH--HHHHHHHHHhccCC
Confidence 44444432 1111 12356688999999976321 1 2223455688998887664322 22 0112234566
Q ss_pred CCC-----CCCHHHH-HHHHHh---cCCcEEEEcccccCh
Q 009838 352 AST-----NLSVLQA-KELLED---EEIGFAYVSLREARP 382 (524)
Q Consensus 352 i~i-----~lspe~a-~~~Lee---~~~GfaFLfAp~~hP 382 (524)
+++ ..+|.++ .+.++. .+.-+.++..|-.+.
T Consensus 154 v~v~~~~~~~~p~~~~~~~l~~~~~~~~D~ViIDTpg~~~ 193 (297)
T 1j8m_F 154 VPVYGEPGEKDVVGIAKRGVEKFLSEKMEIIIVDTAGRHG 193 (297)
T ss_dssp CCEECCTTCCCHHHHHHHHHHHHHHTTCSEEEEECCCSCC
T ss_pred eEEEecCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCCcc
Confidence 653 2345443 233332 235677887765444
No 53
>2lky_A Uncharacterized protein; infectious disease, tuberculosis, DUF proteins, ssgcid, STRU genomics; NMR {Mycobacterium smegmatis str}
Probab=42.54 E-value=27 Score=30.78 Aligned_cols=66 Identities=8% Similarity=0.060 Sum_probs=49.3
Q ss_pred ccCcHHHHHHHHhcCCCCCHHHHHHHHHHhccCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhh
Q 009838 211 REMRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDE 284 (524)
Q Consensus 211 ~~m~l~~~L~kL~~G~~Ls~eEA~~a~~~IL~~~~~~~~G~~s~~QigAFLiaLR~KGET~eELaG~a~Amre~ 284 (524)
+......+|.-| . +.||.+|..++...++. +|.+++..|++++.-..-.-.++++|.-...-+-..
T Consensus 26 P~~Dy~PLLALL-~-r~Ltdeev~~Va~~L~~------~~~i~~~dI~~~I~~vt~~~Ps~eDI~RV~arLaa~ 91 (112)
T 2lky_A 26 PGPDRVPLLALL-T-RRLTNDEIKAIAEDLEK------RAHFDHIDIGVLITQMTDEMPREEDIERVRRHLALQ 91 (112)
T ss_dssp CHHHHHHHHHHH-T-TTCCHHHHHHHHHHHHH------HCCCSCCCSHHHHHHHTTCCCCHHHHHHHHHHHHTT
T ss_pred CCcchHHHHHHH-c-ccCCHHHHHHHHHHHHH------cCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHhc
Confidence 333344444433 3 77999999999999983 577899999999998888888999998776666544
No 54
>2ywd_A Glutamine amidotransferase subunit PDXT; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=40.55 E-value=4.6 Score=36.40 Aligned_cols=112 Identities=13% Similarity=0.038 Sum_probs=59.9
Q ss_pred cceeeCCCC-CCCCChhhhhhhHHHHHHHh-hcC-CCccc-cccHHHHhHHHHh-hh----------hccccCCCCCcCC
Q 009838 98 AKVCTGPTQ-TRPLREDEAFKVLDTILRSA-KGD-LKDEE-EVSKAQLGAFFSA-MT----------IRANAFPEATQWS 162 (524)
Q Consensus 98 ~~v~~gp~~-~~P~~~~~a~~~~~~~l~~~-~~~-l~~~~-~~~~~q~gaffga-~~----------~r~~~~~~~~~~s 162 (524)
-.|++++++ +.+.........++. |+++ ... .|++| |.|+|.|+..+|+ .. +.-+.|.+....-
T Consensus 41 dglil~GG~~~~~~~~~~~~~~~~~-i~~~~~~~~~PilGiC~G~Q~l~~~~gg~~~~~~lg~~~~~~~~~~~g~~~~~~ 119 (191)
T 2ywd_A 41 KALIVPGGESTTIGKLAREYGIEDE-VRKRVEEGSLALFGTCAGAIWLAKEIVGYPEQPRLGVLEAWVERNAFGRQVESF 119 (191)
T ss_dssp SEEEECSSCHHHHHHHHHHTTHHHH-HHHHHHTTCCEEEEETHHHHHHEEEETTCTTCCCCCCEEEEEETTCSCCSSSEE
T ss_pred CEEEECCCChhhhHHhhhhhhHHHH-HHHHHHCCCCeEEEECHHHHHHHHHhCCCCCCccccccceEEEcCCcCCccccc
Confidence 457777773 221111102334555 6666 356 99999 9999999999998 32 1111221110000
Q ss_pred HHH--HHHHHhh----hhHh-hhhCCCceEEEeCCCCcccccCCCC--CCCCCCCCC
Q 009838 163 EGE--RRAMNTF----WPLL-MRALPPDVIFIADPEGSIMGGGGSI--GPHYSGNDP 210 (524)
Q Consensus 163 ~~e--~~~~~~~----~~~l-~~~lp~~~~f~a~p~G~iMg~~~~~--g~~~~~~~~ 210 (524)
+.+ -..+..+ +-.. +..+|+++.++|..+|.+||+.++. |.+|.|...
T Consensus 120 ~~~~~~~~~~~~~~~~~Hs~~v~~l~~~~~~~a~~~~~~~a~~~~~~~gvQfHPE~~ 176 (191)
T 2ywd_A 120 EEDLEVEGLGSFHGVFIRAPVFRRLGEGVEVLARLGDLPVLVRQGKVLASSFHPELT 176 (191)
T ss_dssp EEEEEETTTEEEEEEEESCCEEEEECTTCEEEEEETTEEEEEEETTEEEESSCGGGS
T ss_pred cccccccCCCceeEEEEcccceeccCCCcEEEEEECCEEEEEEECCEEEEEeCCCCC
Confidence 000 0001111 1111 1357888888873368999999876 888876543
No 55
>1vma_A Cell division protein FTSY; TM0570, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics; HET: CIT; 1.60A {Thermotoga maritima} SCOP: a.24.13.1 c.37.1.10
Probab=37.97 E-value=1.7e+02 Score=28.85 Aligned_cols=108 Identities=17% Similarity=0.088 Sum_probs=67.8
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHhccCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhCCCC---CC-
Q 009838 215 LVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPP---PV- 290 (524)
Q Consensus 215 l~~~L~kL~~G~~Ls~eEA~~a~~~IL~~~~~~~~G~~s~~QigAFLiaLR~KGET~eELaG~a~Amre~~~~~---~~- 290 (524)
+.+.++++..|+.++.+-.+++-+.++ ..+++..-.-.|+-.++- .+++-...+.+.+.+.+.+. ..
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~l~~~L~-------~~dv~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~~ 100 (306)
T 1vma_A 30 FFGRVVKLLKGKKLDDETREELEELLI-------QADVGVETTEYILERLEE--KDGDALESLKEIILEILNFDTKLNVP 100 (306)
T ss_dssp THHHHHHHHTTCCCCHHHHHHHHHHHH-------HTTCCHHHHHHHHHHHTT--CCSCHHHHHHHHHHHHTCSCCCCCCC
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHH-------HCCCCHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHhCCCCCCccc
Confidence 455677777666889877788888888 788999888888877765 33332233444555544332 11
Q ss_pred -CCCCCeeEEcCCCCCCCccccchHHHHHHHhccCCeEEeecCCC
Q 009838 291 -ADVKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEW 334 (524)
Q Consensus 291 -~~~~~vDi~GTGGDG~~tfNiST~laA~VlAa~Gv~VaKHGnRa 334 (524)
.....+-++|.+|.|++|+- .- .|..++..|-+|..-+.+-
T Consensus 101 ~~~~~vi~ivG~~GsGKTTl~--~~-LA~~l~~~g~kV~lv~~D~ 142 (306)
T 1vma_A 101 PEPPFVIMVVGVNGTGKTTSC--GK-LAKMFVDEGKSVVLAAADT 142 (306)
T ss_dssp SSSCEEEEEECCTTSSHHHHH--HH-HHHHHHHTTCCEEEEEECT
T ss_pred CCCCeEEEEEcCCCChHHHHH--HH-HHHHHHhcCCEEEEEcccc
Confidence 11235679999999997521 11 1222344588888877553
No 56
>1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A
Probab=35.94 E-value=1.2e+02 Score=30.27 Aligned_cols=110 Identities=12% Similarity=0.064 Sum_probs=67.8
Q ss_pred HHHHHHHHhcC-CCCCHHHHHHHHHHhccCccCCCCCCCCHHHHHHHHHHHHh--cCCCH-HHHH-HHHHHHHhhC----
Q 009838 215 LVGALREVLAG-GHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRM--NRETD-RELK-AYCLAFDDEL---- 285 (524)
Q Consensus 215 l~~~L~kL~~G-~~Ls~eEA~~a~~~IL~~~~~~~~G~~s~~QigAFLiaLR~--KGET~-eELa-G~a~Amre~~---- 285 (524)
+...++++..+ ..++.+-.+++-..++ ..++...-.-.|+-.++- +++.. +.+. .+.+.+.+.+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~-------~~dv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 90 (320)
T 1zu4_A 18 FSKDIKKLSKKYKQADDEFFEELEDVLI-------QTDMGMKMVLKVSNLVRKKTKRDTSFENIKDALVESLYQAYTDND 90 (320)
T ss_dssp HHHHHHHHHHTCCCCSHHHHHHHHHHHH-------HTTCCHHHHHHHHHHHHHHCCTTCCHHHHHHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHcCCCCCCHHHHHHHHHHHH-------HcCCCHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhCccc
Confidence 56677788777 6788877778888888 788999888888887765 34322 2221 1222222222
Q ss_pred -----CCCCC--CCCCCeeEEcCCCCCCCccccchHHHHHHHhccCCeEEeecCCC
Q 009838 286 -----GPPPV--ADVKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEW 334 (524)
Q Consensus 286 -----~~~~~--~~~~~vDi~GTGGDG~~tfNiST~laA~VlAa~Gv~VaKHGnRa 334 (524)
..+.. .....+-++|.+|.|++|+ +.. .|..++..|-+|..-+.+-
T Consensus 91 ~~~~~~~l~~~~~~~~vI~ivG~~G~GKTT~--~~~-LA~~l~~~g~kVllid~D~ 143 (320)
T 1zu4_A 91 WTNKKYRIDFKENRLNIFMLVGVNGTGKTTS--LAK-MANYYAELGYKVLIAAADT 143 (320)
T ss_dssp C----CCCCCCTTSCEEEEEESSTTSSHHHH--HHH-HHHHHHHTTCCEEEEECCC
T ss_pred ccccccCccccCCCCeEEEEECCCCCCHHHH--HHH-HHHHHHHCCCeEEEEeCCC
Confidence 12222 1223577899999999763 222 2223456788998877653
No 57
>2kvc_A Putative uncharacterized protein; structural genomics, seattle structural genomi for infectious disease, ssgcid, unknown function; NMR {Mycobacterium tuberculosis}
Probab=35.20 E-value=40 Score=29.22 Aligned_cols=67 Identities=7% Similarity=0.052 Sum_probs=50.4
Q ss_pred ccCcHHHHHHHHhcCCCCCHHHHHHHHHHhccCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhC
Q 009838 211 REMRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDEL 285 (524)
Q Consensus 211 ~~m~l~~~L~kL~~G~~Ls~eEA~~a~~~IL~~~~~~~~G~~s~~QigAFLiaLR~KGET~eELaG~a~Amre~~ 285 (524)
+......+|.-|. +.||.+|..++...++. +|.+++..|+++.+-..-.-.++++|.-...-+-..-
T Consensus 24 P~~Dy~PLlALL~--r~Ltdeev~~Va~~L~~------~~~i~~~dI~~~I~~vt~~~Ps~eDI~RV~arLaa~G 90 (103)
T 2kvc_A 24 PPTDSFAVLALLC--RRLSHDEVKAVANELMR------LGDFDQIDIGVVITHFTDELPSPEDVERVRARLAAQG 90 (103)
T ss_dssp CHHHHHHHHHHHT--TTSCHHHHHHHHHHHHH------HTSSCSSCHHHHHHSCCSSCSCHHHHHHHHHHHGGGC
T ss_pred CCcchHHHHHHHh--ccCCHHHHHHHHHHHHH------cCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcC
Confidence 3344455554333 46999999999999983 6679999999999988888889999988776665543
No 58
>4gim_A Pseudouridine-5'-phosphate glycosidase; alpha-beta-alpha sandwich fold, hydrolase; HET: PSU; 1.80A {Escherichia coli} PDB: 4gij_A 4gik_A* 4gil_A*
Probab=33.80 E-value=27 Score=35.91 Aligned_cols=108 Identities=13% Similarity=0.087 Sum_probs=68.0
Q ss_pred cCCCHHHHHHHHHHHHhhCCCCCCCCCCCeeEEcCCCCCCCccccchHHHHHHHhccCCeEEeecCCCCCC------CCC
Q 009838 267 NRETDRELKAYCLAFDDELGPPPVADVKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPP------KGG 340 (524)
Q Consensus 267 KGET~eELaG~a~Amre~~~~~~~~~~~~vDi~GTGGDG~~tfNiST~laA~VlAa~Gv~VaKHGnRavsS------ksG 340 (524)
=|.+.+||.-+++.-.+ ..++... +.--.+..|.+|.+|. .. .+++++.+|++|.--|+=+-=. -.=
T Consensus 97 vGL~~~ele~la~~~~~-v~K~SrR--Dl~~~~a~~~~GaTTV---aa-Tm~lA~~AGI~VFaTGGIGGVHRgae~t~DI 169 (335)
T 4gim_A 97 VGLSKEEIELLGREGHN-VTKVSRR--DLPFVVAAGKNGATTV---AS-TMIIAALAGIKVFATGGIGGVHRGAEHTFDI 169 (335)
T ss_dssp ESCCHHHHHHHHHHGGG-SEEECTT--THHHHHHTTCCEEECH---HH-HHHHHHHTTCCEEECSCCCCBBTTHHHHCCB
T ss_pred EcCCHHHHHHHHhcCCC-ceeeecc--cHHHHhhcCCCccccH---HH-HHHHHHHCCCcEEeeCCcCccCCCCCCCccc
Confidence 36899999988753221 2222211 1112456788888772 22 4567788999999888633211 122
Q ss_pred CCHHHHHHh---------CCCCCCCCHHHHHHHHHhcCCcEEEE-cccccChhhh
Q 009838 341 VTEEQMLKF---------MGASTNLSVLQAKELLEDEEIGFAYV-SLREARPSLY 385 (524)
Q Consensus 341 St~aDVLEa---------LGi~i~lspe~a~~~Lee~~~GfaFL-fAp~~hPam~ 385 (524)
| +|+-|- -|++--++.....+.||. .|+..+ |.....|+++
T Consensus 170 S--ADL~eLarTpV~VVcAG~KSILDi~~TLE~LET--~GVpVvgy~td~fPaFy 220 (335)
T 4gim_A 170 S--ADLQELANTNVTVVCAGAASILDLGLTTEYLET--FGVPLIGYQTKALPAFF 220 (335)
T ss_dssp C--HHHHHHHHSCCEEEECBCCTTBCHHHHHHHHHH--TTCCEEEETCSBCCBTT
T ss_pred c--chHHHhccCCeEEEeecchhhccchhHHHHHHh--cCceEEEecCCCCceee
Confidence 4 787774 678877899999999999 666443 4556666653
No 59
>1ejd_A MURA, EPT, UDP-N-acetylglucosamine enolpyruvyltransferase; inside-OUT alpha/beta barrel; 1.55A {Enterobacter cloacae} SCOP: d.68.2.2 PDB: 1ejc_A 1eyn_A* 1ybg_A* 3kqa_A* 3lth_A* 3spb_A 3swq_A* 3upk_A* 1naw_A 1dlg_A 1ryw_A* 1q3g_A* 3su9_A* 3swi_A* 3v4t_A* 3v5v_A* 3swa_A* 1uae_A* 3kqj_A* 3kr6_A* ...
Probab=33.31 E-value=21 Score=36.76 Aligned_cols=171 Identities=12% Similarity=0.044 Sum_probs=95.6
Q ss_pred HHHHHHHHHhcCCC-------HHHHHHHHHHHHhhCCCCCCCCCCCeeEEcCCCCCCC----ccc---cchHHHHHHHhc
Q 009838 257 LSAFLIGQRMNRET-------DRELKAYCLAFDDELGPPPVADVKSLTHYGEPYDGNT----RFF---RSTLFVAAVRSC 322 (524)
Q Consensus 257 igAFLiaLR~KGET-------~eELaG~a~Amre~~~~~~~~~~~~vDi~GTGGDG~~----tfN---iST~laA~VlAa 322 (524)
..+++.++-.+|+| .+++.-.+++|+..-..+...+ .+.+-|.++.+.. ... -++.+++.+++.
T Consensus 26 ~r~Llaa~la~g~t~i~n~~~~~dv~~t~~~L~~lGa~i~~~~--~~~I~~~~~~~~~~~~d~~~~~ras~~l~~alla~ 103 (419)
T 1ejd_A 26 LPILFAALLAEEPVEIQNVPKLKDIDTTMKLLTQLGTKVERXG--SVWIDASNVNNFSAPYDLVKTMRASIWALGPLVAR 103 (419)
T ss_dssp HHHHHHGGGBSSCEEEESCCCCHHHHHHHHHHHHTTCEEEESS--SEEEECTTCCCCEECHHHHTTCGGGGGGHHHHHHH
T ss_pred HHHHHHHHHCCCcEEEecCCCcHHHHHHHHHHHHCCCEEEEcc--eEEEecCCCCCCcCchHHhhhhhHHHHHHHHHhhc
Confidence 44566666677753 5788889999998766654222 3445455432111 011 222334445555
Q ss_pred cC-CeEEeecCCCCCCCCCCCHHHHHHhCCCCCCCCHHHHHHHHHhcCCcEEEEcccccChhhhhHHhhhcccCCCCccc
Q 009838 323 YG-ESCLLHGAEWMPPKGGVTEEQMLKFMGASTNLSVLQAKELLEDEEIGFAYVSLREARPSLYSLIGLREHIKKRPPVA 401 (524)
Q Consensus 323 ~G-v~VaKHGnRavsSksGSt~aDVLEaLGi~i~lspe~a~~~Lee~~~GfaFLfAp~~hPam~~l~pvRk~LGiRTPL~ 401 (524)
.| +.|...|+.++..+--..+.|.|++||++++. + .|...+-.. ..+.+..=.+...+.-.
T Consensus 104 ~~~~~v~l~G~~~l~~rp~~~~~~~L~~mGa~i~~----------~--~g~~~v~~~------~~L~g~~i~~~~~s~~~ 165 (419)
T 1ejd_A 104 FGQGQVSLPGGCAIGARPVDLHIFGLEKLGAEIKL----------E--EGYVKASVN------GRLKGAHIVMDKVSVGA 165 (419)
T ss_dssp HSEEEEECCCCSCCSSCTTHHHHHHHHHTTCEEEE----------E--TTEEEEECS------SSCBCCEEECSSCCHHH
T ss_pred CCceEEEecCCcccCCCchHHHHHHHHHCCCEEEE----------c--CCEEEEEEc------CCccceEEecCCCCHHH
Confidence 55 68888998888766444468999999999862 1 232112111 01222222232222111
Q ss_pred cchhhhhhhhccC-CceEEEeccCCcchHHHHHHHHHcCCC------EEEEEEcC
Q 009838 402 TSEKVQQFVRAQG-REAIVAGFYHEGYEEPLLMLMKRRGVH------SGLVVKGE 449 (524)
Q Consensus 402 npak~~~~lNPag-a~~qViGVfh~~~~~~~A~al~~lG~~------~alVV~G~ 449 (524)
++.-+ ++.+.. -.-.+.++.++++.+.+++.|+++|.+ ..++|+|.
T Consensus 166 ~~~ll--~aa~~a~G~t~I~~~~~e~~i~~t~~~L~~~Ga~i~~~~~~~i~I~g~ 218 (419)
T 1ejd_A 166 TVTIM--SAATLAEGTTIIENAAREPEIVDTANFLVALGAKISGQGTDRITIEGV 218 (419)
T ss_dssp HHHHH--HHHTTSBSEEEEETCCCCHHHHHHHHHHHHTTCEEECTTSSEEEEECC
T ss_pred HHHHH--HHHhcCCCcEEEEeCCCCchHHHHHHHHHHCCCEEEEccCCEEEEeCC
Confidence 22222 122321 234567888899999999999999984 34677763
No 60
>1vkm_A Conserved hypothetical protein TM1464; indigoidine synthase A-like fold, structural genomics, joint for structural genomics, JCSG; HET: MSE UNL; 1.90A {Thermotoga maritima} SCOP: c.138.1.1
Probab=32.80 E-value=24 Score=35.78 Aligned_cols=103 Identities=15% Similarity=0.123 Sum_probs=68.5
Q ss_pred CCCHHHHHHHHHHHHhhCCCCCCCCCCCeeEEcCCCCCCCccccchHHHHHHHhccCCeEEeecC-----CCCCCCCCCC
Q 009838 268 RETDRELKAYCLAFDDELGPPPVADVKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGA-----EWMPPKGGVT 342 (524)
Q Consensus 268 GET~eELaG~a~Amre~~~~~~~~~~~~vDi~GTGGDG~~tfNiST~laA~VlAa~Gv~VaKHGn-----RavsSksGSt 342 (524)
|.+.+||.-++ .+...++.. .+.-..++.|.+|..|. .. .++++..+|++|.--|+ |. +-.=|
T Consensus 73 GL~~~eLe~la---~~~~~K~Sr--RDl~~~~a~g~~GaTTV---aa-Tm~lA~~AGI~VFaTGGiGGVHRg--t~DIS- 140 (297)
T 1vkm_A 73 GMSEEELEAMM---REGADKVGT--REIPIVVAEGKNAATTV---SA-TIFLSRRIGIEVVVTGGTGGVHPG--RVDVS- 140 (297)
T ss_dssp SCCHHHHHHHH---HHCCEEECG--GGHHHHHHHTCCEEECH---HH-HHHHHHHHTCCEEECSCBCCBCTT--SSCBC-
T ss_pred CCCHHHHHHHh---cCCCccccH--hhHHHHHhCCCCchhhH---HH-HHHHHHHcCCcEEEecccccccCC--Ccccc-
Confidence 57899999887 233333322 12223667889998872 22 45677788999998865 33 44445
Q ss_pred HHHHHH---------hCCCCCCCCHHHHHHHHHhcCCcEEEE-cccccChhhh
Q 009838 343 EEQMLK---------FMGASTNLSVLQAKELLEDEEIGFAYV-SLREARPSLY 385 (524)
Q Consensus 343 ~aDVLE---------aLGi~i~lspe~a~~~Lee~~~GfaFL-fAp~~hPam~ 385 (524)
+|+-| .-|++--++.....+.||. .|+..+ |.....|+++
T Consensus 141 -aDL~eL~rTpV~VVcaG~KsILDi~~TLE~LET--~GV~Vvgy~t~~fPaF~ 190 (297)
T 1vkm_A 141 -QDLTEMSSSRAVLVSSGIKSILDVEATFEMLET--LEIPLVGFRTNEFPLFF 190 (297)
T ss_dssp -HHHHHHTTCCEEEEESBBCTTSCHHHHHHHHHH--TTCCEEEESCSBCCBTT
T ss_pred -hhHHHhcCCCeEEEecccchhhcchhHHHHHHh--CCceEEEecCCCCCcee
Confidence 88887 4677777899999999999 665433 4556666654
No 61
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.46 E-value=31 Score=27.24 Aligned_cols=36 Identities=11% Similarity=0.130 Sum_probs=30.2
Q ss_pred CCCCCHHHHHHhCCCCCCCCHHHHHHHHHhcCCcEEEEcccccChh
Q 009838 338 KGGVTEEQMLKFMGASTNLSVLQAKELLEDEEIGFAYVSLREARPS 383 (524)
Q Consensus 338 ksGSt~aDVLEaLGi~i~lspe~a~~~Lee~~~GfaFLfAp~~hPa 383 (524)
.++. .|.++-|||+...+.+++++...+ .+..|||-
T Consensus 5 ~~~~--~~~y~iLgv~~~as~~eIk~ayr~--------l~~~~HPD 40 (82)
T 2ej7_A 5 SSGM--VDYYEVLDVPRQASSEAIKKAYRK--------LALKWHPD 40 (82)
T ss_dssp CSSS--CCHHHHTTCCTTCCHHHHHHHHHH--------HHTTSCTT
T ss_pred CCCC--cCHHHHcCCCCCCCHHHHHHHHHH--------HHHHHCcC
Confidence 3455 689999999999999999999998 36688886
No 62
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=29.42 E-value=3e+02 Score=28.72 Aligned_cols=153 Identities=7% Similarity=-0.021 Sum_probs=96.7
Q ss_pred CeeEEcCCCCCCCccccchHHHHHHHhccCCeEEeecCCCC----CCC---------CCCCHHHHHHhCCCCCCCCHHHH
Q 009838 295 SLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWM----PPK---------GGVTEEQMLKFMGASTNLSVLQA 361 (524)
Q Consensus 295 ~vDi~GTGGDG~~tfNiST~laA~VlAa~Gv~VaKHGnRav----sSk---------sGSt~aDVLEaLGi~i~lspe~a 361 (524)
+.-|...|....+.....-- .+-.++.+|+.++|.+-+-. ++. +|+++-|+++.++...+ .....
T Consensus 29 ~~IIAEiG~NH~Gsle~A~~-li~~Ak~aGAdavKfQ~~k~~tl~s~~~~~fq~~~~~~~~~ye~~~~~~l~~e-~~~~L 106 (385)
T 1vli_A 29 VFIIAEAGINHDGKLDQAFA-LIDAAAEAGADAVKFQMFQADRMYQKDPGLYKTAAGKDVSIFSLVQSMEMPAE-WILPL 106 (385)
T ss_dssp CEEEEEEETTTTTCHHHHHH-HHHHHHHHTCSEEEECCBCGGGGTSCCC---------CCCHHHHGGGBSSCGG-GHHHH
T ss_pred cEEEEeecCcccccHHHHHH-HHHHHHHhCCCEEeeeeeccCcccCcchhhhccCCCCCccHHHHHHhcCCCHH-HHHHH
Confidence 44455455555555665555 55667889999999995432 221 24455689998887644 46677
Q ss_pred HHHHHhcCCcEEEEcccccChhhhhHHhh-hcccCCCC-ccccchhhhhhhhccCCce-EEEeccCCcchHHHHHHHHHc
Q 009838 362 KELLEDEEIGFAYVSLREARPSLYSLIGL-REHIKKRP-PVATSEKVQQFVRAQGREA-IVAGFYHEGYEEPLLMLMKRR 438 (524)
Q Consensus 362 ~~~Lee~~~GfaFLfAp~~hPam~~l~pv-Rk~LGiRT-PL~npak~~~~lNPaga~~-qViGVfh~~~~~~~A~al~~l 438 (524)
.+.-++ .|+-|+..|.--.++..+..+ =..+.+-+ -++|. .+++.+.-.+-.. .=.|....+=.+.-++.+...
T Consensus 107 ~~~~~~--~Gi~~~stpfD~~svd~l~~~~vd~~KIgS~~~~N~-pLL~~va~~gKPViLStGmaTl~Ei~~Ave~i~~~ 183 (385)
T 1vli_A 107 LDYCRE--KQVIFLSTVCDEGSADLLQSTSPSAFKIASYEINHL-PLLKYVARLNRPMIFSTAGAEISDVHEAWRTIRAE 183 (385)
T ss_dssp HHHHHH--TTCEEECBCCSHHHHHHHHTTCCSCEEECGGGTTCH-HHHHHHHTTCSCEEEECTTCCHHHHHHHHHHHHTT
T ss_pred HHHHHH--cCCcEEEccCCHHHHHHHHhcCCCEEEECcccccCH-HHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHC
Confidence 777788 999999888888888888655 24455555 34443 2233333233222 335776444444446777777
Q ss_pred CCCEEEEEEcCCCc
Q 009838 439 GVHSGLVVKGEEGA 452 (524)
Q Consensus 439 G~~~alVV~G~eG~ 452 (524)
|.+..++.|+..++
T Consensus 184 Gn~~iiLlhc~s~Y 197 (385)
T 1vli_A 184 GNNQIAIMHCVAKY 197 (385)
T ss_dssp TCCCEEEEEECSSS
T ss_pred CCCcEEEEeccCCC
Confidence 88788888987665
No 63
>2m0n_A Putative uncharacterized protein; tuberculosis, structural genomics, seattle structural genomi for infectious disease, ssgcid; NMR {Mycobacterium abscessus}
Probab=28.71 E-value=1.6e+02 Score=25.90 Aligned_cols=61 Identities=15% Similarity=0.125 Sum_probs=45.5
Q ss_pred CCCCCHHHHHHHHHHhccCccC-CCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhC
Q 009838 225 GGHLGYEEVQGVLRDVLPLQVD-NKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDEL 285 (524)
Q Consensus 225 G~~Ls~eEA~~a~~~IL~~~~~-~~~G~~s~~QigAFLiaLR~KGET~eELaG~a~Amre~~ 285 (524)
.+.||.+|..++...++.-... ...+.++..+|+.+.+-..-.-.|+++|.-.+.-+-..-
T Consensus 38 ~R~LtdeEV~~Va~~L~~~~~~~~~~~~i~~~dI~v~It~VT~e~P~peDI~RV~arLaA~G 99 (112)
T 2m0n_A 38 RRTLTEEQVQEVVAKLTDPESSAQIDGVVSKDEIEKFIADVTKDEPTAQDISRVASRLAAGG 99 (112)
T ss_dssp CSSCCHHHHHHHHHHHTCTTTHHHHTSCCCTTHHHHHHHHTTTCCCCHHHHHHHHHHHHHCC
T ss_pred hccCCHHHHHHHHHHHHhccCcccCCCCCCHHHHHHHHHHHhccCcCHHHHHHHHHHHHhcC
Confidence 3459999999999999820000 002348889999999999989999999988776665543
No 64
>2g7r_A Mucosa-associated lymphoid tissue lymphoma transl protein 1; death domain, chromosomal translocation, hydrolase; 2.70A {Homo sapiens}
Probab=26.14 E-value=2e+02 Score=25.46 Aligned_cols=63 Identities=19% Similarity=0.085 Sum_probs=47.7
Q ss_pred CcHHHHHHHHhcCC--CCCHHHHHHHHHHhccCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhh
Q 009838 213 MRLVGALREVLAGG--HLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDE 284 (524)
Q Consensus 213 m~l~~~L~kL~~G~--~Ls~eEA~~a~~~IL~~~~~~~~G~~s~~QigAFLiaLR~KGET~eELaG~a~Amre~ 284 (524)
.-|+++-+.+..+. .+|.+|.+..=-.++ ..+.+|. -.+|--+.+||-|.+||..|.++|-.+
T Consensus 43 kGWrkLAe~l~~~~~fr~S~~~l~~cslkvl-------e~~gSPS--r~LL~~~~~~g~Tl~~L~~~Lq~mg~~ 107 (117)
T 2g7r_A 43 RGWRRLAELAGSRGRLRLSCLDLEQCSLKVL-------EPEGSPS--LCLLKLMGEKGCTVTELSDFLQAMEHT 107 (117)
T ss_dssp -CHHHHHHHCC------CCHHHHHHHHGGGG-------STTCCHH--HHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHhccccccccChHHhhhhhhhhh-------ccCCChH--HHHHHHHHHcCCcHHHHHHHHHHhccH
Confidence 34777777776664 578888888877777 6778888 678888888999999999999999753
No 65
>1rf6_A 5-enolpyruvylshikimate-3-phosphate synthase; shikimate pathway, EPSP synthase, glyphosate, PEP, transferase; HET: GPJ S3P; 1.90A {Streptococcus pneumoniae} SCOP: d.68.2.2 PDB: 1rf5_A 1rf4_A*
Probab=26.10 E-value=75 Score=32.82 Aligned_cols=101 Identities=17% Similarity=0.082 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHhcCCC-------HHHHHHHHHHHHhhCCCCCCCCCCCeeEEcCCCCCC----Ccc---ccchH--HHHH
Q 009838 255 SLLSAFLIGQRMNRET-------DRELKAYCLAFDDELGPPPVADVKSLTHYGEPYDGN----TRF---FRSTL--FVAA 318 (524)
Q Consensus 255 ~QigAFLiaLR~KGET-------~eELaG~a~Amre~~~~~~~~~~~~vDi~GTGGDG~----~tf---NiST~--laA~ 318 (524)
.+.-+++.+.-.+|+| .+++..++++|+..-..+.... ..+.+-|.+..+. ... |-.|. |.+-
T Consensus 22 ~t~r~Llaa~La~g~t~I~n~~~s~Dv~~~~~~L~~lG~~i~~~~-~~~~I~g~~~~~~~~p~~~id~~~sgt~~rll~a 100 (427)
T 1rf6_A 22 ISHRSIIFGSLAEGETKVYDILRGEDVLSTMQVFRDLGVEIEDKD-GVITVQGVGMAGLKAPQNALNMGNSGTSIRLISG 100 (427)
T ss_dssp HHHHHHHHHHHSBSEEEEESCCCSHHHHHHHHHHHHTTCEEEEET-TEEEEECCCSSCCCCCSSCEECTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEccCCCCHHHHHHHHHHHHcCCeEEecC-CEEEEECCCCCCcCCCcceeeccccchHHHHHHH
Confidence 3446777777777743 4788888999998766553211 2344545432111 111 12222 3344
Q ss_pred HHhccCCeEEeecCCCCCCCCCCCHHHHHHhCCCCCCC
Q 009838 319 VRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNL 356 (524)
Q Consensus 319 VlAa~Gv~VaKHGnRavsSksGSt~aDVLEaLGi~i~l 356 (524)
+++..+..|...|..++...-=..+-|.|++||++++.
T Consensus 101 ~la~~~~~v~l~G~~~l~~Rpi~~~l~~L~~mGa~i~~ 138 (427)
T 1rf6_A 101 VLAGADFEVEMFGDDSLSKRPMDRVTLPLKKMGVSISG 138 (427)
T ss_dssp HGGGCSSEEEEECCTTGGGSCCHHHHHHHHHTTCEEEE
T ss_pred HHhcCCcEEEEeCCCccCCCCHHHHHHHHHHCCCEEEE
Confidence 44666789999998877654333358999999998863
No 66
>2px0_A Flagellar biosynthesis protein FLHF; SRP GTPase, flagellum, protein transport, biosynthetic protein; HET: GNP; 3.00A {Bacillus subtilis} PDB: 2px3_A* 3syn_A*
Probab=25.36 E-value=4.2e+02 Score=25.72 Aligned_cols=130 Identities=14% Similarity=0.030 Sum_probs=67.6
Q ss_pred CCCCCHHHHHHHHHHHHhc-----CCCHHHHHHHH-HHHHhhCCCC---CCC-CCCCeeEEcCCCCCCCccccchHHHHH
Q 009838 249 APGVSESLLSAFLIGQRMN-----RETDRELKAYC-LAFDDELGPP---PVA-DVKSLTHYGEPYDGNTRFFRSTLFVAA 318 (524)
Q Consensus 249 ~G~~s~~QigAFLiaLR~K-----GET~eELaG~a-~Amre~~~~~---~~~-~~~~vDi~GTGGDG~~tfNiST~laA~ 318 (524)
..+++....-.|+-.++-+ +.+.+++...+ +.+.+.+.+. ... ....+-++|.+|.|++|+- ..++..
T Consensus 51 ~~dv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~g~vi~lvG~~GsGKTTl~--~~LA~~ 128 (296)
T 2px0_A 51 ETGIKESTKTNTLKKLLRFSVEAGGLTEENVVGKLQEILCDMLPSADKWQEPIHSKYIVLFGSTGAGKTTTL--AKLAAI 128 (296)
T ss_dssp HSCCCHHHHHHHHHHHHHHHHSSSCCCTTTHHHHHHHHHHTTSCCGGGSCCCCCSSEEEEEESTTSSHHHHH--HHHHHH
T ss_pred HCCCCHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHhCCcccccccCCCcEEEEECCCCCCHHHHH--HHHHHH
Confidence 5566666666666555211 33444444433 3444433221 111 1346778999999997521 121222
Q ss_pred HHhccCCeEEeecCCCCCCCCCCCHHHHHHh----CCCCC--CCCHHHHHHHHHhc-CCcEEEEcccccChhh
Q 009838 319 VRSCYGESCLLHGAEWMPPKGGVTEEQMLKF----MGAST--NLSVLQAKELLEDE-EIGFAYVSLREARPSL 384 (524)
Q Consensus 319 VlAa~Gv~VaKHGnRavsSksGSt~aDVLEa----LGi~i--~lspe~a~~~Lee~-~~GfaFLfAp~~hPam 384 (524)
.....|.+|..-+.+.. +.+..+.|+. +|+++ ..++.++...+... +.-+.+++.+-..+.-
T Consensus 129 l~~~~G~~V~lv~~D~~----r~~a~eqL~~~~~~~gl~~~~~~~~~~l~~al~~~~~~dlvIiDT~G~~~~~ 197 (296)
T 2px0_A 129 SMLEKHKKIAFITTDTY----RIAAVEQLKTYAELLQAPLEVCYTKEEFQQAKELFSEYDHVFVDTAGRNFKD 197 (296)
T ss_dssp HHHTTCCCEEEEECCCS----STTHHHHHHHHHTTTTCCCCBCSSHHHHHHHHHHGGGSSEEEEECCCCCTTS
T ss_pred HHHhcCCEEEEEecCcc----cchHHHHHHHHHHhcCCCeEecCCHHHHHHHHHHhcCCCEEEEeCCCCChhh
Confidence 22347988888776653 2222444443 66664 24455555544321 2567788877666543
No 67
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}
Probab=24.47 E-value=2.3e+02 Score=21.37 Aligned_cols=48 Identities=17% Similarity=0.184 Sum_probs=34.1
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHhccCccCCCCCCCCHHHHHHHHHHHHhcC
Q 009838 215 LVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNR 268 (524)
Q Consensus 215 l~~~L~kL~~G~~Ls~eEA~~a~~~IL~~~~~~~~G~~s~~QigAFLiaLR~KG 268 (524)
++.+++.+ |..++.+|+..+|..+= ...+|.++-.+.-.++...+-..
T Consensus 31 l~~~l~~~--g~~~~~~~~~~l~~~~d----~~~dg~i~~~eF~~~~~~~~~~~ 78 (92)
T 2kn2_A 31 LRHVMINL--GEKLTDEEVEQMIKEAD----LDGDGQVNYEEFVKMMMTVRGGG 78 (92)
T ss_dssp HHHHHHHT--TCCCCHHHHHHHHHHHC----SSCCSSEEHHHHHHHHHHHTTTC
T ss_pred HHHHHHHh--CCCCCHHHHHHHHHHhC----CCCCCcEeHHHHHHHHHhccCCC
Confidence 56666665 67899999999998873 22367888888877776655443
No 68
>2v3c_C SRP54, signal recognition 54 kDa protein; nucleotide-binding, signal recognition particle, GTP-binding, RNA-binding; 2.50A {Methanocaldococcus jannaschii} PDB: 3ndb_B
Probab=24.21 E-value=5.9e+02 Score=26.29 Aligned_cols=159 Identities=15% Similarity=0.093 Sum_probs=84.3
Q ss_pred cHHHHHHHHhcCCCCCH----HHHHHHHHHhccCccCCCCCCCCHHHHHHHHHHHHhcC--------CCHHH-HHHHH-H
Q 009838 214 RLVGALREVLAGGHLGY----EEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNR--------ETDRE-LKAYC-L 279 (524)
Q Consensus 214 ~l~~~L~kL~~G~~Ls~----eEA~~a~~~IL~~~~~~~~G~~s~~QigAFLiaLR~KG--------ET~eE-LaG~a-~ 279 (524)
.+...++++.....|+. +-.+++...++ +.++.....-.|.-.++.+. .+..+ +...+ +
T Consensus 7 ~~~~~~~~~~~~~~~~e~~~~~~~~e~~~~Ll-------~adv~~~~~~~~~~~vk~~~~~~~~~~~~~~~~~~~~~~~~ 79 (432)
T 2v3c_C 7 NLNKALNKLKAAAFVDKKLIKEVIKDIQRALI-------QADVNVKLVLKMSKEIERRALEEKTPKGLSKKEHIIKIVYE 79 (432)
T ss_dssp HHHHHHHHCCSSSCCCSSTTHHHHHHHHHHHH-------HTCCCHHHHHHHTHHHHHHHSSSCSSCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHH-------HcCCCHHHHHHHHHHHHHHhccccccccCChHHHHHHHHHH
Confidence 36677888866667886 34456667777 78888888888877776532 34444 33322 2
Q ss_pred HHHhhCCC----CCCC--CCCCeeEEcCCCCCCCccccchHHHHHHHhccCCeEEeecCCCCCCCCCCCHHHHHHhCCCC
Q 009838 280 AFDDELGP----PPVA--DVKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGAS 353 (524)
Q Consensus 280 Amre~~~~----~~~~--~~~~vDi~GTGGDG~~tfNiST~laA~VlAa~Gv~VaKHGnRavsSksGSt~aDVLEaLGi~ 353 (524)
.+.+.+.. +... ....|-++|.+|-|++|+-. . .|..++..|.+|+.-..+...+..--.+....+..|++
T Consensus 80 ~l~~ll~~~~~~~~~~~~~~~vI~ivG~~GvGKTTla~--~-La~~l~~~G~kVllv~~D~~r~~a~~qL~~~~~~~gv~ 156 (432)
T 2v3c_C 80 ELVKLLGEEAKKLELNPKKQNVILLVGIQGSGKTTTAA--K-LARYIQKRGLKPALIAADTYRPAAYEQLKQLAEKIHVP 156 (432)
T ss_dssp HHHHHHCCSCCCCCCCSSSCCCEEEECCSSSSTTHHHH--H-HHHHHHHHHCCEEEECCSCCCTTGGGSSHHHHHHSSCC
T ss_pred HHHHHhCCCCcCccccCCCCeEEEEECCCCCCHHHHHH--H-HHHHHHHcCCeEEEEeccccCchHHHHHHHhhhccCcc
Confidence 23333322 2111 12367799999999976321 1 11223345788876655433221111112223345554
Q ss_pred CC------CCHH-HHHHHHHh-cCCcEEEEcccccCh
Q 009838 354 TN------LSVL-QAKELLED-EEIGFAYVSLREARP 382 (524)
Q Consensus 354 i~------lspe-~a~~~Lee-~~~GfaFLfAp~~hP 382 (524)
+. .+|. -+.+.++. .+.-+.++..|-+++
T Consensus 157 v~~~~~~~~dp~~i~~~~l~~~~~~D~vIIDT~G~~~ 193 (432)
T 2v3c_C 157 IYGDETRTKSPVDIVKEGMEKFKKADVLIIDTAGRHK 193 (432)
T ss_dssp EECCSSSCCSSSTTHHHHHHTTSSCSEEEEECCCSCS
T ss_pred eEecCCCCCCHHHHHHHHHHHhhCCCEEEEcCCCCcc
Confidence 21 1221 11233322 126788898887776
No 69
>1q7r_A Predicted amidotransferase; structural genomics, YAAE, PDX2, predicted glutamine amidotransferase, PSI; HET: MSE; 1.90A {Geobacillus stearothermophilus} SCOP: c.23.16.1
Probab=23.81 E-value=9.3 Score=35.74 Aligned_cols=112 Identities=6% Similarity=-0.048 Sum_probs=59.7
Q ss_pred cceeeCCCCCCCCChhh-hhhhHHHHHHHh-hcCCCccc-cccHHHHhHHHHhhhhcccc-CCCCCcCCHHHH--HHH--
Q 009838 98 AKVCTGPTQTRPLREDE-AFKVLDTILRSA-KGDLKDEE-EVSKAQLGAFFSAMTIRANA-FPEATQWSEGER--RAM-- 169 (524)
Q Consensus 98 ~~v~~gp~~~~P~~~~~-a~~~~~~~l~~~-~~~l~~~~-~~~~~q~gaffga~~~r~~~-~~~~~~~s~~e~--~~~-- 169 (524)
-.|+++.++..+.+... ....++. ||++ ....|++| |.|+|.|+..+|+.+.+.-. +| +..+.... ...
T Consensus 62 Dglil~GG~~~~~~~~~~~~~~~~~-i~~~~~~~~PilGIC~G~QlL~~~~gg~~~~~lg~~~--~~~~~~~~g~~~~~~ 138 (219)
T 1q7r_A 62 DGLVLPGGESTTMRRLIDRYGLMEP-LKQFAAAGKPMFGTCAGLILLAKRIVGYDEPHLGLMD--ITVERNSFGRQRESF 138 (219)
T ss_dssp SEEEECCCCHHHHHHHHHHTTCHHH-HHHHHHTTCCEEEETTHHHHHEEEEESSCCCCCCCEE--EEEECHHHHCCCCCE
T ss_pred CEEEECCCChHHHHHHhhhhHHHHH-HHHHHHcCCeEEEECHHHHHHHHHhCCCCcCCcCccc--eEEEecCCCccccce
Confidence 34666666532221100 1122455 6665 56799999 99999999999986522100 00 00000000 000
Q ss_pred --HhhhhH-------------hhhhCCCceEEEeCCCCcccccCCCC--CCCCCCCCCcc
Q 009838 170 --NTFWPL-------------LMRALPPDVIFIADPEGSIMGGGGSI--GPHYSGNDPRE 212 (524)
Q Consensus 170 --~~~~~~-------------l~~~lp~~~~f~a~p~G~iMg~~~~~--g~~~~~~~~~~ 212 (524)
+...++ .++.+|+.+.++|..||.++|+.++. |++|.|.....
T Consensus 139 ~~~~~~~g~g~~~~~~~~h~~~v~~l~~~~~v~a~sdg~~ea~~~~~i~GvQfHPE~~~~ 198 (219)
T 1q7r_A 139 EAELSIKGVGDGFVGVFIRAPHIVEAGDGVDVLATYNDRIVAARQGQFLGCSFHPELTDD 198 (219)
T ss_dssp EEEEEETTTEEEEEEEESSCCEEEEECTTCEEEEEETTEEEEEEETTEEEESSCGGGSSC
T ss_pred ecCcccCCCCCceEEEEEecceeeccCCCcEEEEEcCCEEEEEEECCEEEEEECcccCCC
Confidence 000011 11356788888874489999998764 77887655433
No 70
>2nv0_A Glutamine amidotransferase subunit PDXT; 3-layer(ABA) sandwich, rossmann fold, glutaminase; 1.73A {Bacillus subtilis} SCOP: c.23.16.1 PDB: 1r9g_A 2nv2_B*
Probab=22.47 E-value=12 Score=34.09 Aligned_cols=112 Identities=9% Similarity=0.087 Sum_probs=57.5
Q ss_pred cceeeCCCCCCCCChhh-hhhhHHHHHHHh-hcCCCccc-cccHHHHhHHHHhhhhcc----------ccCCCCCc-CCH
Q 009838 98 AKVCTGPTQTRPLREDE-AFKVLDTILRSA-KGDLKDEE-EVSKAQLGAFFSAMTIRA----------NAFPEATQ-WSE 163 (524)
Q Consensus 98 ~~v~~gp~~~~P~~~~~-a~~~~~~~l~~~-~~~l~~~~-~~~~~q~gaffga~~~r~----------~~~~~~~~-~s~ 163 (524)
-.|+++.++..+-++.. .....+. ||++ ....|+++ |.|+|.|+..+|+...+. +.+..... ...
T Consensus 40 d~iil~GG~~~~~~~~~~~~~~~~~-i~~~~~~~~pilgIC~G~q~l~~~~gg~~~~~lg~~~~~~~~~~~g~~~~~~~~ 118 (196)
T 2nv0_A 40 DGLILPGGESTTMRRLIDTYQFMEP-LREFAAQGKPMFGTCAGLIILAKEIAGSDNPHLGLLNVVVERNSFGRQVDSFEA 118 (196)
T ss_dssp SEEEECCSCHHHHHHHHHHTTCHHH-HHHHHHTTCCEEEETHHHHHHSBCCC----CCCCCSCEEEECCCSCTTTSEEEE
T ss_pred CEEEECCCChhhHHHHhhhHHHHHH-HHHHHHCCCcEEEECHHHHHHHHHhcCCCCCcccCCceeEeccCCCcccccccC
Confidence 34666556433321110 1223455 5655 56799999 999999999999853211 01100000 000
Q ss_pred HHHHHHHhhhhH---------hhhhCCCceEEEeCCCCcccccCCCC--CCCCCCCCCcc
Q 009838 164 GERRAMNTFWPL---------LMRALPPDVIFIADPEGSIMGGGGSI--GPHYSGNDPRE 212 (524)
Q Consensus 164 ~e~~~~~~~~~~---------l~~~lp~~~~f~a~p~G~iMg~~~~~--g~~~~~~~~~~ 212 (524)
. ..+..++.. .+..+|+.+.++|..||.++|++++. |.+|.|.....
T Consensus 119 -~-~~~~~~g~~~~~~~~h~~~v~~~~~~~~v~a~~d~~~~a~~~~~~~gvQfHPE~~~~ 176 (196)
T 2nv0_A 119 -D-LTIKGLDEPFTGVFIRAPHILEAGENVEVLSEHNGRIVAAKQGQFLGCSFHPELTED 176 (196)
T ss_dssp -E-ECCTTCSSCEEEEEESCCEEEEECTTCEEEEEETTEEEEEEETTEEEESSCTTSSSC
T ss_pred -C-cccccCCCceEEEEEecceecccCCCcEEEEEECCEEEEEEECCEEEEEECCccCCc
Confidence 0 000001100 11246777888874478999988754 88888766544
No 71
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.42 E-value=27 Score=28.37 Aligned_cols=38 Identities=13% Similarity=0.187 Sum_probs=30.9
Q ss_pred CCCCCCCHHHHHHhCCCCCCCCHHHHHHHHHhcCCcEEEEcccccChh
Q 009838 336 PPKGGVTEEQMLKFMGASTNLSVLQAKELLEDEEIGFAYVSLREARPS 383 (524)
Q Consensus 336 sSksGSt~aDVLEaLGi~i~lspe~a~~~Lee~~~GfaFLfAp~~hPa 383 (524)
++.++. .|.++-|||+...+.+++++...+ .+..|||-
T Consensus 3 ~~~~~~--~~~y~iLgv~~~as~~eIk~ayr~--------l~~~~HPD 40 (92)
T 2dmx_A 3 SGSSGM--ANYYEVLGVQASASPEDIKKAYRK--------LALRWHPD 40 (92)
T ss_dssp CCCCCC--CCHHHHHTCCTTCCTTHHHHHHHH--------HHHHTCTT
T ss_pred CCCCCC--cCHHHHcCCCCCCCHHHHHHHHHH--------HHHHHCCC
Confidence 344455 789999999999999999999988 35688886
No 72
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.18 E-value=52 Score=27.17 Aligned_cols=35 Identities=11% Similarity=0.138 Sum_probs=29.2
Q ss_pred CHHHHHHhCCCCCCCCHHHHHHHHHhcCCcEEEEcccccChhh
Q 009838 342 TEEQMLKFMGASTNLSVLQAKELLEDEEIGFAYVSLREARPSL 384 (524)
Q Consensus 342 t~aDVLEaLGi~i~lspe~a~~~Lee~~~GfaFLfAp~~hPam 384 (524)
+..|.++-|||+.+.+.+++++...+ .+..|||-.
T Consensus 15 ~~~~~Y~vLgv~~~as~~eIk~ayr~--------l~~~~HPDk 49 (99)
T 2yua_A 15 SRTALYDLLGVPSTATQAQIKAAYYR--------QCFLYHPDR 49 (99)
T ss_dssp CSSHHHHHHTCCTTCCHHHHHHHHHH--------HHHHSCTTT
T ss_pred CccCHHHHcCCCCCCCHHHHHHHHHH--------HHHHHCcCC
Confidence 33699999999999999999999988 356788853
No 73
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=22.10 E-value=2.4e+02 Score=27.14 Aligned_cols=112 Identities=21% Similarity=0.138 Sum_probs=75.4
Q ss_pred cCCeEEeecCCCCCCCCCCCHHHHHHhCCCCCCCCHHHHHHHHHhcCCcEEEEcc---c-ccChhhhhHHhhhcccCCCC
Q 009838 323 YGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNLSVLQAKELLEDEEIGFAYVSL---R-EARPSLYSLIGLREHIKKRP 398 (524)
Q Consensus 323 ~Gv~VaKHGnRavsSksGSt~aDVLEaLGi~i~lspe~a~~~Lee~~~GfaFLfA---p-~~hPam~~l~pvRk~LGiRT 398 (524)
.|+.|.--=.|+.||| |. +.- .+|.+..+..++ .|...+.. + .|.....++..+|+..+++-
T Consensus 44 ~~~~~IaE~k~aSPsk-g~----------i~~-~~p~~~A~~~~~--~GA~~isvlt~~~~f~G~~~~l~~i~~~v~lPv 109 (254)
T 1vc4_A 44 PGLSVIAEVKRQSPSE-GL----------IRE-VDPVEAALAYAR--GGARAVSVLTEPHRFGGSLLDLKRVREAVDLPL 109 (254)
T ss_dssp SSCEEEEEECSCCTTT-CC----------CCS-CCHHHHHHHHHH--TTCSEEEEECCCSSSCCCHHHHHHHHHHCCSCE
T ss_pred cCCcEEeeecCCCcCC-Cc----------CCC-CCHHHHHHHHHH--cCCCEEEEecchhhhccCHHHHHHHHHhcCCCE
Confidence 3788887778998886 44 333 578888888888 55544443 3 34457889999999877653
Q ss_pred ----ccccchhhhhhhhccCCceEEEeccCC-cchHHHHHHHHHcCCCEEEEEEcC
Q 009838 399 ----PVATSEKVQQFVRAQGREAIVAGFYHE-GYEEPLLMLMKRRGVHSGLVVKGE 449 (524)
Q Consensus 399 ----PL~npak~~~~lNPaga~~qViGVfh~-~~~~~~A~al~~lG~~~alVV~G~ 449 (524)
++.++..+.. .--+|++..++|...- ...+.+.+..+.+|.+--+-||+.
T Consensus 110 l~kdfI~d~~qi~~-a~~~GAD~VlL~~~~l~~~l~~l~~~a~~lGl~~lvev~~~ 164 (254)
T 1vc4_A 110 LRKDFVVDPFMLEE-ARAFGASAALLIVALLGELTGAYLEEARRLGLEALVEVHTE 164 (254)
T ss_dssp EEESCCCSHHHHHH-HHHTTCSEEEEEHHHHGGGHHHHHHHHHHHTCEEEEEECSH
T ss_pred EECCcCCCHHHHHH-HHHcCCCEEEECccchHHHHHHHHHHHHHCCCeEEEEECCH
Confidence 6677756532 4457889999988643 344444444557898655566764
No 74
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=20.76 E-value=43 Score=27.57 Aligned_cols=40 Identities=10% Similarity=0.106 Sum_probs=32.8
Q ss_pred CCCCCCCHHHHHHhCCCCCCCCHHHHHHHHHhcCCcEEEEcccccChh
Q 009838 336 PPKGGVTEEQMLKFMGASTNLSVLQAKELLEDEEIGFAYVSLREARPS 383 (524)
Q Consensus 336 sSksGSt~aDVLEaLGi~i~lspe~a~~~Lee~~~GfaFLfAp~~hPa 383 (524)
+.-...+..|+++-||++.+.+.+++++...+ .+-.|||-
T Consensus 8 ~~~~~~~~~~~y~vLgv~~~as~~eIKkaYrk--------la~~~HPD 47 (88)
T 1iur_A 8 LVPRGSILKEVTSVVEQAWKLPESERKKIIRR--------LYLKWHPD 47 (88)
T ss_dssp CCCSSSCHHHHHHHHHHTTSSCSHHHHHHHHH--------HHHHTCTT
T ss_pred CCCCCccHHHHHHHhCCCCCCCHHHHHHHHHH--------HHHHHCCC
Confidence 33345566999999999999999999999988 36688886
No 75
>2o0b_A 3-phosphoshikimate 1-carboxyvinyltransferase; shikimate pathway, EPSP synthase, structural genomics; HET: S3P; 1.15A {Mycobacterium tuberculosis} PDB: 2o0d_A* 2o0e_A* 2o0x_A* 2o0z_A* 2o15_A 2bjb_A
Probab=20.47 E-value=1.3e+02 Score=31.52 Aligned_cols=105 Identities=10% Similarity=0.055 Sum_probs=60.0
Q ss_pred CCCCCHHHHHHHHH-HHHhcC-----------CCHHHHHHHHHHHHhhCCCCCCCCCCCeeEEcCCCCCCCcccc-----
Q 009838 249 APGVSESLLSAFLI-GQRMNR-----------ETDRELKAYCLAFDDELGPPPVADVKSLTHYGEPYDGNTRFFR----- 311 (524)
Q Consensus 249 ~G~~s~~QigAFLi-aLR~KG-----------ET~eELaG~a~Amre~~~~~~~~~~~~vDi~GTGGDG~~tfNi----- 311 (524)
.+++|---+++||+ |...+| .+..|+...++.|++.-..+.......+-+-|..+.|. .+.+
T Consensus 163 ~~d~Ssq~~salllAA~~~~g~~~I~~~~~~~~s~p~i~~t~~~L~~~Ga~I~~~~~~~i~I~g~~l~g~-~~~v~~D~s 241 (450)
T 2o0b_A 163 DASASSQFVSGLLLSAASFTDGLTVQHTGSSLPSAPHIAMTAAMLRQAGVDIDDSTPNRWQVRPGPVAAR-RWDIEPDLT 241 (450)
T ss_dssp CCTTCTHHHHHHHHHGGGSTTCEEEEECSSCCCCHHHHHHHHHHHHHTTCCEECCSTTEEEECCCCCCCC-CEECCBCHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCeEEEeCCCCcCCCcHHHHHHHHHHHCCCeEEecCCcEEEEECCCCcCc-eEEcCCCHH
Confidence 45566655666666 445544 25677888888888776665422112344544344432 2223
Q ss_pred --chHHHHHHHhccCCeEEeecCCCCCCCCCCCHHHHHHhCCCCCCC
Q 009838 312 --STLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNL 356 (524)
Q Consensus 312 --ST~laA~VlAa~Gv~VaKHGnRavsSksGSt~aDVLEaLGi~i~l 356 (524)
++.++| +|-+|=.|...|-...+-+.+.-+.++|++||+++..
T Consensus 242 ~A~~~laa--aa~~~g~v~i~~v~~~~~q~~~~i~~~L~~mGa~i~~ 286 (450)
T 2o0b_A 242 NAVAFLSA--AVVSGGTVRITGWPRVSVQPADHILAILRQLNAVVIH 286 (450)
T ss_dssp HHHHHHHH--HHHHTCEEEETTCCSSCSSCHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHH--HHhcCCeEEECCCCcccccchHHHHHHHHHcCCeEEE
Confidence 333233 2223556888886655555442358999999999863
No 76
>1l6x_B Minimized B-domain of protein A Z34C; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: k.13.1.1 PDB: 1oqo_C* 1oqx_C* 1zdc_A 1zdd_A
Probab=20.15 E-value=2.1e+02 Score=20.21 Aligned_cols=32 Identities=9% Similarity=0.032 Sum_probs=28.4
Q ss_pred CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhh
Q 009838 253 SESLLSAFLIGQRMNRETDRELKAYCLAFDDE 284 (524)
Q Consensus 253 s~~QigAFLiaLR~KGET~eELaG~a~Amre~ 284 (524)
+.+|--||--.|.+.+.|.|+--|+.+.+++.
T Consensus 2 ~~~qQnaFYevLh~~nLtEeQrn~yI~slkdd 33 (34)
T 1l6x_B 2 NMQCQRRFYEALHDPNLNEEQRNAKIKSIRDD 33 (34)
T ss_dssp CHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHcCCCCCHHHHHhHHHHHhcc
Confidence 46788899999999999999999999998864
Done!