BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009839
(524 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5RAS2|GLE1_PONAB Nucleoporin GLE1 OS=Pongo abelii GN=GLE1 PE=2 SV=1
Length = 698
Score = 119 bits (298), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 103/185 (55%), Gaps = 16/185 (8%)
Query: 309 YVIVLVASQV----PQVMDILLGEFHRACIYTVPKHIVFSEAAFESEEAYYKTIGYREED 364
+ I +VAS + P+V D++L H+ C Y+VP + F E + E Y + +GY+ +D
Sbjct: 500 FPIAVVASGIWELHPRVGDLILAHLHKKCPYSVPFYPTFKEGM--ALEDYQRMLGYQVKD 557
Query: 365 GKIESLENYLSRLKSYMRLYAALIQTEIPGVQ----NAHGLKEGWAWLARFLNALPANIY 420
K+E +N+L R+ +RLYAA+IQ P + HGL GW WLA+ LN P +
Sbjct: 558 SKVEQQDNFLKRMSGMIRLYAAIIQLRWPYGNRQEIHPHGLNHGWRWLAQILNMEPLSDV 617
Query: 421 TAVALNAFLQLAGFALFKKYKSQFRKILDNIYDNFLNALKAREDSKLNLVIAEIQYYIED 480
TA L FL++ G AL K+Y+ QF K+L I +++ ++A S ++ +I
Sbjct: 618 TATLLFDFLEVCGNALMKQYQVQFWKMLILIKEDYFPRIEAITSS------GQMGSFIRL 671
Query: 481 KKFLE 485
K+FLE
Sbjct: 672 KQFLE 676
>sp|Q53GS7|GLE1_HUMAN Nucleoporin GLE1 OS=Homo sapiens GN=GLE1 PE=1 SV=2
Length = 698
Score = 119 bits (298), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 103/186 (55%), Gaps = 16/186 (8%)
Query: 308 GYVIVLVASQV----PQVMDILLGEFHRACIYTVPKHIVFSEAAFESEEAYYKTIGYREE 363
+ I +VAS + P+V D++L H+ C Y+VP + F E + E Y + +GY+ +
Sbjct: 499 AFPIAVVASGIWELHPRVGDLILAHLHKKCPYSVPFYPTFKEGM--ALEDYQRMLGYQVK 556
Query: 364 DGKIESLENYLSRLKSYMRLYAALIQTEIPGVQ----NAHGLKEGWAWLARFLNALPANI 419
D K+E +N+L R+ +RLYAA+IQ P + HGL GW WLA+ LN P +
Sbjct: 557 DSKVEQQDNFLKRMSGMIRLYAAIIQLRWPYGNRQEIHPHGLNHGWRWLAQILNMEPLSD 616
Query: 420 YTAVALNAFLQLAGFALFKKYKSQFRKILDNIYDNFLNALKAREDSKLNLVIAEIQYYIE 479
TA L FL++ G AL K+Y+ QF K+L I +++ ++A S ++ +I
Sbjct: 617 VTATLLFDFLEVCGNALMKQYQVQFWKMLILIKEDYFPRIEAITSS------GQMGSFIR 670
Query: 480 DKKFLE 485
K+FLE
Sbjct: 671 LKQFLE 676
>sp|Q4KLN4|GLE1_RAT Nucleoporin GLE1 OS=Rattus norvegicus GN=Gle1 PE=2 SV=1
Length = 698
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 105/187 (56%), Gaps = 16/187 (8%)
Query: 308 GYVIVLVASQV----PQVMDILLGEFHRACIYTVPKHIVFSEAAFESEEAYYKTIGYREE 363
+ I +VAS + P+V D++L H+ C Y+VP + F E E Y + +GY+
Sbjct: 499 AFPIAVVASGIWMLHPKVGDLILAHLHKKCPYSVPFYPAFKEGM--PLEDYQRMLGYQVT 556
Query: 364 DGKIESLENYLSRLKSYMRLYAALIQTEIP-GVQ---NAHGLKEGWAWLARFLNALPANI 419
D K+E +N+L R+ +RLYAA+IQ + P G + + HGL GW WLA+ LN P +
Sbjct: 557 DSKVEQQDNFLKRMSGMIRLYAAIIQLQWPYGSRQEAHPHGLNHGWRWLAQILNMEPLSD 616
Query: 420 YTAVALNAFLQLAGFALFKKYKSQFRKILDNIYDNFLNALKAREDSKLNLVIAEIQYYIE 479
TA L FL++ G AL K+Y+ QF K++ I +++ ++A S ++ +I
Sbjct: 617 VTATLLFDFLEVCGNALMKQYQVQFWKMILLIKEDYFPRIEAITSS------GQMGSFIR 670
Query: 480 DKKFLEE 486
K+FLE+
Sbjct: 671 LKQFLEK 677
>sp|Q8R322|GLE1_MOUSE Nucleoporin GLE1 OS=Mus musculus GN=Gle1 PE=2 SV=2
Length = 699
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 103/186 (55%), Gaps = 16/186 (8%)
Query: 308 GYVIVLVASQV----PQVMDILLGEFHRACIYTVPKHIVFSEAAFESEEAYYKTIGYREE 363
+ I +VAS + P+V D++L H+ C Y+VP + F E + E Y + +GY+
Sbjct: 500 AFPIAVVASGIWMLHPKVGDLILAHLHKKCPYSVPFYPAFKEGM--ALEDYQRMLGYQVT 557
Query: 364 DGKIESLENYLSRLKSYMRLYAALIQTEIPGVQ----NAHGLKEGWAWLARFLNALPANI 419
D K+E +N+L R+ +RLYAA+IQ + P + HGL GW WLA+ LN P +
Sbjct: 558 DSKVEQQDNFLKRMSGMIRLYAAIIQLQWPYGNRQEAHPHGLNHGWRWLAQVLNMEPLSD 617
Query: 420 YTAVALNAFLQLAGFALFKKYKSQFRKILDNIYDNFLNALKAREDSKLNLVIAEIQYYIE 479
TA L FL++ G AL K+Y+ QF K++ I +++ ++A S ++ +I
Sbjct: 618 VTATLLFDFLEVCGNALMKQYQVQFWKMILLIKEDYFPRIEAITSS------GQMGSFIR 671
Query: 480 DKKFLE 485
K+FLE
Sbjct: 672 LKQFLE 677
>sp|Q3ZBK7|GLE1_BOVIN Nucleoporin GLE1 OS=Bos taurus GN=GLE1 PE=2 SV=1
Length = 698
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 103/186 (55%), Gaps = 16/186 (8%)
Query: 309 YVIVLVASQV----PQVMDILLGEFHRACIYTVPKHIVFSEAAFESEEAYYKTIGYREED 364
+ I +VAS + P+V ++L H+ C Y+VP + F E + E Y + +GY+ +D
Sbjct: 500 FPIAVVASGIWELHPRVGALILAHLHKKCPYSVPFYPAFKEGM--ALEDYQRMLGYQVKD 557
Query: 365 GKIESLENYLSRLKSYMRLYAALIQTEIP----GVQNAHGLKEGWAWLARFLNALPANIY 420
K+E +N+L R+ +RLYAA+IQ P + HGL GW WLA+ LN P +
Sbjct: 558 SKVEQQDNFLKRMSGMIRLYAAIIQLRWPYGNRQETHPHGLNHGWRWLAQILNMEPLSDV 617
Query: 421 TAVALNAFLQLAGFALFKKYKSQFRKILDNIYDNFLNALKAREDSKLNLVIAEIQYYIED 480
TA L FL++ G AL K+Y+ QF K++ I +++ ++A S ++ +I
Sbjct: 618 TATLLFDFLEVCGNALMKQYQVQFWKMILLIKEDYFPRIEAITSS------GQMGSFIRL 671
Query: 481 KKFLEE 486
K+FLE+
Sbjct: 672 KQFLEK 677
>sp|Q6DRB1|GLE1_DANRE Nucleoporin GLE1 OS=Danio rerio GN=gle1 PE=2 SV=2
Length = 695
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 103/190 (54%), Gaps = 19/190 (10%)
Query: 280 PQSISLATF--SKKVVSRCETPDDNVA--MSCGYVIVLVASQV----PQVMDILLGEFHR 331
PQ + A++ ++K V + E + VA S + I VAS + P++ D++L H+
Sbjct: 490 PQGLEFASYRLAEKFVKQGE---EEVASNHSAAFPIGAVASGIWELHPKIGDLILAHLHK 546
Query: 332 ACIYTVPKHIVFSEAAFESEEAYYKTIGYREEDGKIESLENYLSRLKSYMRLYAALIQTE 391
C Y VP + S E Y K +GYR ++GK+E +++L R+ +RLYAA+IQ
Sbjct: 547 KCPYAVPHYPPMESGT--SVEDYQKILGYRVDEGKVEGQDSFLKRMSGMIRLYAAIIQMR 604
Query: 392 IP-----GVQNAHGLKEGWAWLARFLNALPANIYTAVALNAFLQLAGFALFKKYKSQFRK 446
P G+ + HG+ GW W+A+ LN P TA L FL++ G AL K+Y+ QF K
Sbjct: 605 WPYSSKQGL-HLHGMNHGWRWMAQILNMEPLADITATILFDFLEVCGNALMKQYRVQFWK 663
Query: 447 ILDNIYDNFL 456
++ I + +
Sbjct: 664 LILIINEEYF 673
>sp|Q9V4W1|GLE1_DROME Nucleoporin GLE1 OS=Drosophila melanogaster GN=GLE1 PE=2 SV=1
Length = 677
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 14/215 (6%)
Query: 271 VKILNNPLCPQSISLATFSKKVVSRCET---PDDNVAMSCGYVIVLVASQVPQVMDILLG 327
+ I ++PL + + +KK VS+ ET + A VI+ +P + L
Sbjct: 448 ITINDHPLA-RDYCMLLMAKKFVSQTETAICSNPQAAFPFASVIITFWKLLPDFGKVFLA 506
Query: 328 EFHRACIYTVPKHIVFSEAAFESEEAYYKTIGYREED-GKIESLENYLSRLKSYMRLYAA 386
++ + VP V + ++ E Y KTIGYR D ++E + YL R RLYAA
Sbjct: 507 YMYKESPFLVP--YVIPQQQGQTPEQYLKTIGYRLTDKNELEKPDIYLKRQTGLARLYAA 564
Query: 387 LIQTE---IPGVQNAHGLKEGWAWLARFLNALPANIYTAVALNAFLQLAGFALFKKYKSQ 443
+I ++ G L EGW WLA ++ P +A + LQ GF L++ Y Q
Sbjct: 565 VIISQGRKAAGPDECFELNEGWLWLAHMVHVKPLPDISATLIMEILQTLGFELWRTYGKQ 624
Query: 444 FRKILDNIYDNFLNALKARED----SKLNLVIAEI 474
F K+L I + ++ L A ++ ++L +++A+
Sbjct: 625 FVKLLVYIQNIYMPQLAAYDEGGPKTRLEMLLAKF 659
>sp|Q5B5B0|PAN1_EMENI Actin cytoskeleton-regulatory complex protein pan1 OS=Emericella
nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL
194 / M139) GN=pan1 PE=3 SV=1
Length = 1484
Score = 38.1 bits (87), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 45/74 (60%), Gaps = 7/74 (9%)
Query: 96 ERKIRSDAAYEEAKRKE---RALQEEKIRQEKVKAEAEMQAKLRAEEAKRAALEAEKRAA 152
E K R D E + +E RAL EE++RQ K+K + E K R EEAK+AA E E R A
Sbjct: 1081 EAKQREDEFAREQQEQEARLRAL-EEQVRQGKIKKQEE---KRRREEAKKAAQEQEARLA 1136
Query: 153 KEAAEREAAENSKR 166
++ AE EAA+ +R
Sbjct: 1137 RQRAELEAAKERER 1150
>sp|A7TL57|ATG11_VANPO Autophagy-related protein 11 OS=Vanderwaltozyma polyspora (strain
ATCC 22028 / DSM 70294) GN=ATG11 PE=3 SV=1
Length = 1219
Score = 36.2 bits (82), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 95/186 (51%), Gaps = 18/186 (9%)
Query: 72 KIAEALDNHLTAVQRDHELKSQIEERKIRSD----AAYEEAKRKERALQEEKIRQ---EK 124
KI +D++ T + + +LK IE +++ S A KR+E + E+ ++Q E
Sbjct: 719 KIDGLVDSNKTLLNQISDLK--IESKELESSNRDLLAQLNQKREEHKVLEDSLKQRENEG 776
Query: 125 VKAEAEMQAKLR----AEEAKRAALEAEKRAAKEAAEREAAENSKRITAGVSQDGACGRQ 180
++ + E +AKL+ EA R ALE E +AAKE +E+ E +A S D + +
Sbjct: 777 LRYKDEYEAKLKELTEKFEADRRALEDEIKAAKEQNMKESMEQQTEQSANQSIDQSIEQS 836
Query: 181 PDDSSVIAGAQSRGSRSDGTKKLQSAVRATESAL--NIEQKRLQKLKELDE--ENQSLKL 236
+ S+ + QS + + + QS ++ E ++ ++EQ Q + + D +NQS++
Sbjct: 837 TEQSTEQSTEQSMEQSMEQSME-QSVEQSMEHSMEHSMEQSEKQNMGQNDATIDNQSIET 895
Query: 237 SSNEDF 242
++ED
Sbjct: 896 PTSEDM 901
>sp|Q8CDI7|CC150_MOUSE Coiled-coil domain-containing protein 150 OS=Mus musculus
GN=Ccdc150 PE=2 SV=2
Length = 1110
Score = 32.3 bits (72), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 20/122 (16%)
Query: 43 QSNSALAQVEKDRDMRREMDRKNDTVYQRKIAEALDNHLTAVQRDHELKSQIEERKIRSD 102
Q S + ++K D+ RE +RK +A +L+ A+Q + L+S++ D
Sbjct: 764 QHGSEIEPLQKSLDITREDNRK--------LAMSLEQ---ALQTNGHLQSKL-------D 805
Query: 103 AAYEEAKRKERALQEEKIRQEKVKAEAEMQAKLRAE--EAKRAALEAEKRAAKEAAEREA 160
E+ + KER Q + +E+V E++++A+L AE EA R + E+ AK+A++RE
Sbjct: 806 HLQEKLESKERERQSLEAFKEQVAEESKVEAELHAERIEALRKQFQTERETAKKASQREV 865
Query: 161 AE 162
+E
Sbjct: 866 SE 867
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.129 0.349
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 172,357,362
Number of Sequences: 539616
Number of extensions: 6725184
Number of successful extensions: 51955
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 630
Number of HSP's successfully gapped in prelim test: 2663
Number of HSP's that attempted gapping in prelim test: 35987
Number of HSP's gapped (non-prelim): 9295
length of query: 524
length of database: 191,569,459
effective HSP length: 122
effective length of query: 402
effective length of database: 125,736,307
effective search space: 50545995414
effective search space used: 50545995414
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)