Query 009843
Match_columns 524
No_of_seqs 395 out of 3197
Neff 8.7
Searched_HMMs 13730
Date Mon Mar 25 14:14:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009843.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/009843hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1oywa3 c.37.1.19 (A:207-406) 100.0 3.3E-42 2.4E-46 319.0 20.5 200 226-456 1-200 (200)
2 d1oywa2 c.37.1.19 (A:1-206) Re 100.0 8.2E-33 6E-37 258.3 22.5 202 16-223 3-204 (206)
3 d2bmfa2 c.37.1.14 (A:178-482) 100.0 1.3E-34 9.3E-39 286.7 10.4 270 51-365 7-300 (305)
4 d2j0sa2 c.37.1.19 (A:244-411) 100.0 6.8E-29 4.9E-33 222.9 18.4 149 230-378 6-154 (168)
5 d1fuka_ c.37.1.19 (A:) Initiat 100.0 5.7E-29 4.1E-33 222.2 14.1 140 242-381 11-150 (162)
6 d1hv8a2 c.37.1.19 (A:211-365) 100.0 7.9E-28 5.7E-32 213.5 18.1 147 230-378 2-148 (155)
7 d1s2ma2 c.37.1.19 (A:252-422) 100.0 1.3E-27 9.8E-32 215.5 19.3 150 230-380 5-154 (171)
8 d2rb4a1 c.37.1.19 (A:307-474) 100.0 1.1E-27 8E-32 215.1 18.1 150 230-379 4-159 (168)
9 d1veca_ c.37.1.19 (A:) DEAD bo 99.9 3.5E-27 2.6E-31 219.3 19.0 189 15-223 3-205 (206)
10 d2j0sa1 c.37.1.19 (A:22-243) P 99.9 1E-27 7.5E-32 224.9 13.9 193 11-223 13-218 (222)
11 d1t6na_ c.37.1.19 (A:) Spliceo 99.9 1.1E-26 8E-31 216.1 18.8 190 15-223 1-205 (207)
12 d1t5ia_ c.37.1.19 (A:) Spliceo 99.9 1.2E-26 8.7E-31 208.4 17.2 134 243-376 12-146 (168)
13 d1qdea_ c.37.1.19 (A:) Initiat 99.9 1.1E-26 8.3E-31 216.6 15.8 192 11-223 6-210 (212)
14 d1c4oa2 c.37.1.19 (A:410-583) 99.9 5.3E-26 3.9E-30 202.3 15.5 121 245-366 16-143 (174)
15 d1hv8a1 c.37.1.19 (A:3-210) Pu 99.9 2.9E-25 2.1E-29 206.7 19.2 189 15-224 4-205 (208)
16 d2g9na1 c.37.1.19 (A:21-238) I 99.9 3.6E-26 2.6E-30 214.1 13.0 193 12-223 9-214 (218)
17 d1t5la2 c.37.1.19 (A:415-595) 99.9 9.4E-25 6.9E-29 197.2 16.6 120 245-365 16-142 (181)
18 d1q0ua_ c.37.1.19 (A:) Probabl 99.9 3.6E-25 2.6E-29 206.4 12.4 189 16-224 2-207 (209)
19 d1wrba1 c.37.1.19 (A:164-401) 99.9 1.7E-25 1.3E-29 212.4 9.4 194 10-223 16-235 (238)
20 d1s2ma1 c.37.1.19 (A:46-251) P 99.9 9.5E-25 6.9E-29 203.0 13.5 189 16-224 2-203 (206)
21 d1jr6a_ c.37.1.14 (A:) HCV hel 99.9 4.3E-24 3.2E-28 184.0 8.2 103 254-366 31-137 (138)
22 d2p6ra3 c.37.1.19 (A:1-202) He 99.9 5.6E-22 4.1E-26 183.5 14.0 175 22-215 10-192 (202)
23 d1gkub1 c.37.1.16 (B:1-250) He 99.9 1.3E-22 9.4E-27 192.7 8.7 175 21-213 28-224 (237)
24 d1wp9a1 c.37.1.19 (A:1-200) pu 99.8 2.5E-19 1.8E-23 164.9 20.7 152 38-206 9-169 (200)
25 d2p6ra4 c.37.1.19 (A:203-403) 99.8 1.9E-20 1.4E-24 172.3 11.5 120 247-368 31-189 (201)
26 d1wp9a2 c.37.1.19 (A:201-486) 99.8 3.9E-20 2.8E-24 180.4 13.6 118 250-368 153-278 (286)
27 d1gm5a4 c.37.1.19 (A:550-755) 99.8 3.8E-20 2.8E-24 169.4 3.4 126 246-371 15-154 (206)
28 d2eyqa3 c.37.1.19 (A:546-778) 99.8 2.5E-17 1.8E-21 153.2 20.2 171 18-209 36-219 (233)
29 d1a1va2 c.37.1.14 (A:326-624) 99.8 1.7E-19 1.2E-23 170.7 5.3 106 257-363 35-153 (299)
30 d1gkub2 c.37.1.16 (B:251-498) 99.7 3.6E-21 2.6E-25 183.7 -7.6 122 243-375 11-137 (248)
31 d2fwra1 c.37.1.19 (A:257-456) 99.7 7.9E-19 5.8E-23 161.7 6.4 108 244-356 79-186 (200)
32 d2eyqa5 c.37.1.19 (A:779-989) 99.7 4.7E-17 3.4E-21 147.3 16.2 136 227-365 3-141 (211)
33 d1gm5a3 c.37.1.19 (A:286-549) 99.7 6.1E-17 4.5E-21 153.4 17.3 169 20-209 66-247 (264)
34 d2fz4a1 c.37.1.19 (A:24-229) D 99.7 4.3E-17 3.1E-21 150.6 13.8 136 38-203 70-205 (206)
35 d1rifa_ c.37.1.23 (A:) DNA hel 99.6 4.1E-16 3E-20 150.7 9.4 144 38-206 113-265 (282)
36 d1yksa1 c.37.1.14 (A:185-324) 99.6 2.4E-16 1.8E-20 135.3 5.5 131 52-204 6-140 (140)
37 d1a1va1 c.37.1.14 (A:190-325) 99.5 7.8E-15 5.7E-19 125.7 8.6 127 54-203 9-136 (136)
38 d1z3ix1 c.37.1.19 (X:390-735) 99.5 4.5E-13 3.3E-17 132.4 18.4 167 244-410 101-285 (346)
39 d1yksa2 c.37.1.14 (A:325-623) 99.4 8.4E-14 6.1E-18 134.1 10.2 107 252-364 31-156 (299)
40 d1tf5a4 c.37.1.19 (A:396-570) 99.4 1.9E-12 1.4E-16 112.9 13.5 123 242-366 16-148 (175)
41 d1z5za1 c.37.1.19 (A:663-906) 99.3 8.5E-13 6.2E-17 124.5 9.8 117 244-360 69-190 (244)
42 d1z3ix2 c.37.1.19 (X:92-389) R 99.2 3E-11 2.2E-15 117.2 12.3 168 38-217 55-244 (298)
43 d1z63a1 c.37.1.19 (A:432-661) 99.1 1.3E-10 9.4E-15 108.2 9.4 158 38-219 12-178 (230)
44 d1nkta4 c.37.1.19 (A:397-615) 98.8 1.1E-08 8.4E-13 90.2 12.4 122 243-367 17-193 (219)
45 d1tf5a3 c.37.1.19 (A:1-226,A:3 98.7 7.3E-08 5.3E-12 88.9 12.2 178 26-217 69-265 (273)
46 d1nkta3 c.37.1.19 (A:-15-225,A 98.5 1.9E-07 1.4E-11 86.5 10.9 134 27-171 87-230 (288)
47 d1w36d1 c.37.1.19 (D:2-360) Ex 97.6 0.00019 1.4E-08 69.8 12.3 76 23-98 133-215 (359)
48 d1gm5a3 c.37.1.19 (A:286-549) 96.8 0.0025 1.8E-07 58.6 10.2 89 257-347 131-224 (264)
49 d1uaaa1 c.37.1.19 (A:2-307) DE 96.8 0.00055 4E-08 64.4 5.5 61 38-100 1-68 (306)
50 d1sxjd2 c.37.1.20 (D:26-262) R 96.5 0.0078 5.7E-07 53.9 11.4 50 7-70 1-50 (237)
51 d1sxjb2 c.37.1.20 (B:7-230) Re 96.4 0.0048 3.5E-07 55.1 9.2 51 5-71 2-54 (224)
52 d2qy9a2 c.37.1.10 (A:285-495) 96.4 0.033 2.4E-06 48.9 14.2 127 56-215 12-151 (211)
53 d1okkd2 c.37.1.10 (D:97-303) G 96.3 0.029 2.1E-06 49.3 13.6 129 54-215 7-148 (207)
54 d1sxjc2 c.37.1.20 (C:12-238) R 96.3 0.0051 3.7E-07 54.9 8.6 49 6-70 2-52 (227)
55 d1pjra1 c.37.1.19 (A:1-318) DE 96.2 0.0025 1.9E-07 60.1 6.1 61 38-100 11-78 (318)
56 d2eyqa3 c.37.1.19 (A:546-778) 96.2 0.024 1.8E-06 50.7 12.4 77 257-333 103-184 (233)
57 d1vmaa2 c.37.1.10 (A:82-294) G 96.2 0.032 2.3E-06 49.2 13.0 127 56-215 14-153 (213)
58 d1a5ta2 c.37.1.20 (A:1-207) de 96.2 0.014 1.1E-06 51.3 10.7 34 38-71 2-42 (207)
59 d1ls1a2 c.37.1.10 (A:89-295) G 95.9 0.12 8.9E-06 45.0 15.5 126 56-214 13-145 (207)
60 d1sxje2 c.37.1.20 (E:4-255) Re 95.8 0.0096 7E-07 53.8 8.1 47 12-71 5-51 (252)
61 d1iqpa2 c.37.1.20 (A:2-232) Re 95.7 0.025 1.8E-06 50.3 10.2 52 6-71 12-63 (231)
62 d1l8qa2 c.37.1.20 (A:77-289) C 95.4 0.071 5.1E-06 46.9 12.0 15 55-69 38-52 (213)
63 d1c4oa2 c.37.1.19 (A:410-583) 95.2 0.049 3.6E-06 46.2 9.7 84 74-169 27-110 (174)
64 d1t5la1 c.37.1.19 (A:2-414) Nu 95.1 0.012 8.8E-07 57.5 6.2 63 39-101 12-79 (413)
65 d1njfa_ c.37.1.20 (A:) delta p 95.0 0.029 2.1E-06 50.4 8.3 46 158-209 115-160 (239)
66 g1qhh.1 c.37.1.19 (A:,B:,C:,D: 94.4 0.021 1.5E-06 58.7 6.5 62 37-100 10-78 (623)
67 d1ixza_ c.37.1.20 (A:) AAA dom 94.4 0.057 4.1E-06 48.7 8.5 67 16-86 7-75 (247)
68 d1j8yf2 c.37.1.10 (F:87-297) G 94.3 0.4 2.9E-05 41.7 13.8 129 56-215 15-150 (211)
69 d2eyqa5 c.37.1.19 (A:779-989) 94.1 0.17 1.2E-05 44.0 10.8 102 70-192 23-126 (211)
70 d1cr2a_ c.37.1.11 (A:) Gene 4 93.8 0.099 7.2E-06 47.6 9.2 35 52-86 34-72 (277)
71 d1d2na_ c.37.1.20 (A:) Hexamer 93.8 0.055 4E-06 48.8 7.2 17 54-70 41-57 (246)
72 d1w5sa2 c.37.1.20 (A:7-293) CD 93.5 0.32 2.3E-05 43.6 12.3 35 156-190 130-164 (287)
73 d1t5la2 c.37.1.19 (A:415-595) 93.0 0.2 1.5E-05 42.6 9.3 83 75-169 28-110 (181)
74 d2gnoa2 c.37.1.20 (A:11-208) g 92.7 0.72 5.3E-05 39.5 12.7 28 43-70 2-32 (198)
75 d1lv7a_ c.37.1.20 (A:) AAA dom 92.4 0.12 8.6E-06 46.8 7.2 53 15-70 9-62 (256)
76 d1e32a2 c.37.1.20 (A:201-458) 92.3 0.24 1.8E-05 44.6 9.2 33 54-86 39-71 (258)
77 d1sxja2 c.37.1.20 (A:295-547) 92.2 0.3 2.2E-05 43.4 9.8 45 158-206 123-167 (253)
78 d1ofha_ c.37.1.20 (A:) HslU {H 91.5 0.11 8.3E-06 48.3 6.1 19 53-71 49-67 (309)
79 d1r6bx2 c.37.1.20 (X:169-436) 91.4 0.87 6.3E-05 41.0 12.0 16 54-69 40-55 (268)
80 d1r7ra3 c.37.1.20 (A:471-735) 90.7 0.34 2.5E-05 43.7 8.5 32 54-85 42-73 (265)
81 d1tf7a2 c.37.1.11 (A:256-497) 90.2 0.9 6.6E-05 39.6 10.9 102 53-172 26-130 (242)
82 d1um8a_ c.37.1.20 (A:) ClpX {H 90.0 0.14 1E-05 48.8 5.2 17 54-70 69-85 (364)
83 d1c4oa1 c.37.1.19 (A:2-409) Nu 89.6 0.2 1.4E-05 48.5 6.1 64 38-101 8-76 (408)
84 d1p9ra_ c.37.1.11 (A:) Extrace 88.8 0.24 1.8E-05 47.8 6.1 31 39-69 142-174 (401)
85 d1g6oa_ c.37.1.11 (A:) Hexamer 88.7 0.2 1.4E-05 46.9 5.1 52 39-90 151-205 (323)
86 d1jbka_ c.37.1.20 (A:) ClpB, A 88.4 1.5 0.00011 37.2 10.4 17 54-70 44-60 (195)
87 d1t5ia_ c.37.1.19 (A:) Spliceo 88.2 0.73 5.3E-05 38.3 8.1 61 77-139 26-86 (168)
88 d1hv8a2 c.37.1.19 (A:211-365) 87.5 0.94 6.9E-05 36.9 8.3 59 78-138 28-86 (155)
89 d1g41a_ c.37.1.20 (A:) HslU {H 87.3 0.23 1.7E-05 48.6 4.8 19 53-71 49-67 (443)
90 d1fnna2 c.37.1.20 (A:1-276) CD 87.0 0.17 1.2E-05 45.2 3.4 17 54-70 44-60 (276)
91 d1oywa3 c.37.1.19 (A:207-406) 86.0 1.1 8.2E-05 38.3 8.2 60 77-138 29-88 (200)
92 d2b8ta1 c.37.1.24 (A:11-149) T 86.0 0.28 2.1E-05 39.7 3.9 32 56-87 5-39 (139)
93 d2rb4a1 c.37.1.19 (A:307-474) 85.3 1.3 9.5E-05 36.6 8.1 60 78-139 32-91 (168)
94 d1hv8a1 c.37.1.19 (A:3-210) Pu 84.9 0.96 7E-05 38.9 7.3 71 257-332 71-151 (208)
95 d1s2ma2 c.37.1.19 (A:252-422) 84.6 1.5 0.00011 36.3 8.1 61 77-139 31-91 (171)
96 d2j0sa1 c.37.1.19 (A:22-243) P 84.1 2.6 0.00019 36.4 9.9 70 258-331 85-164 (222)
97 d1fuka_ c.37.1.19 (A:) Initiat 84.0 1.3 9.7E-05 36.3 7.5 60 77-138 26-85 (162)
98 d1gvnb_ c.37.1.21 (B:) Plasmid 83.9 0.43 3.1E-05 42.6 4.6 32 55-86 34-65 (273)
99 d1ixsb2 c.37.1.20 (B:4-242) Ho 83.5 0.2 1.5E-05 44.3 2.0 18 54-71 36-53 (239)
100 d2j0sa2 c.37.1.19 (A:244-411) 83.5 2.9 0.00021 34.4 9.5 80 57-139 12-93 (168)
101 d1kaga_ c.37.1.2 (A:) Shikimat 83.2 0.37 2.7E-05 39.0 3.5 24 53-76 2-25 (169)
102 d1xbta1 c.37.1.24 (A:18-150) T 83.0 1.2 8.5E-05 35.4 6.4 32 56-88 5-40 (133)
103 d2eyqa2 c.37.1.19 (A:349-465) 81.4 0.45 3.3E-05 37.1 3.1 78 244-334 21-98 (117)
104 d1e9ra_ c.37.1.11 (A:) Bacteri 81.3 0.52 3.8E-05 45.5 4.3 42 51-92 48-92 (433)
105 d1in4a2 c.37.1.20 (A:17-254) H 80.0 0.59 4.3E-05 40.9 3.9 18 54-71 36-53 (238)
106 d1zp6a1 c.37.1.25 (A:6-181) Hy 79.9 0.54 4E-05 38.6 3.4 20 52-71 3-22 (176)
107 d1svma_ c.37.1.20 (A:) Papillo 79.5 0.65 4.7E-05 43.9 4.2 51 34-84 131-185 (362)
108 d1u94a1 c.37.1.11 (A:6-268) Re 79.4 2.5 0.00018 37.6 8.1 97 45-171 40-145 (263)
109 d1mo6a1 c.37.1.11 (A:1-269) Re 77.2 3.5 0.00026 36.8 8.4 97 45-171 46-151 (269)
110 d1qvra2 c.37.1.20 (A:149-535) 77.0 2.6 0.00019 39.9 7.8 16 54-69 44-59 (387)
111 d1ly1a_ c.37.1.1 (A:) Polynucl 76.1 1.2 8.6E-05 35.5 4.4 15 56-70 5-19 (152)
112 d2bdta1 c.37.1.25 (A:1-176) Hy 75.5 1.2 8.5E-05 36.1 4.3 16 56-71 5-20 (176)
113 d1yj5a2 c.37.1.1 (A:351-522) 5 75.4 4.9 0.00036 32.9 8.4 15 56-70 17-31 (172)
114 d2i3ba1 c.37.1.11 (A:1-189) Ca 75.2 0.85 6.2E-05 37.5 3.3 16 54-69 2-17 (189)
115 d1g8pa_ c.37.1.20 (A:) ATPase 75.1 0.45 3.3E-05 44.3 1.5 20 52-71 27-46 (333)
116 d1bg2a_ c.37.1.9 (A:) Kinesin 74.2 1.1 7.7E-05 41.6 4.0 25 46-70 67-93 (323)
117 d1krwa_ c.23.1.1 (A:) NTRC rec 74.2 16 0.0011 27.7 11.8 48 157-212 46-94 (123)
118 d1xp8a1 c.37.1.11 (A:15-282) R 74.0 4.5 0.00033 36.0 8.2 119 23-171 8-148 (268)
119 d1y63a_ c.37.1.1 (A:) Probable 73.9 1.4 0.0001 35.8 4.4 20 53-72 5-24 (174)
120 d1n0wa_ c.37.1.11 (A:) DNA rep 73.8 1.2 8.5E-05 37.6 3.9 24 46-69 11-39 (242)
121 d1nlfa_ c.37.1.11 (A:) Hexamer 73.7 16 0.0012 31.6 12.2 21 50-70 26-46 (274)
122 d1rkba_ c.37.1.1 (A:) Adenylat 73.2 0.96 7E-05 36.8 3.1 19 54-72 5-23 (173)
123 d1lw7a2 c.37.1.1 (A:220-411) T 72.9 1.5 0.00011 35.8 4.4 17 54-70 8-24 (192)
124 d1viaa_ c.37.1.2 (A:) Shikimat 70.0 1.4 9.8E-05 36.0 3.3 19 54-72 1-19 (161)
125 d1r6bx3 c.37.1.20 (X:437-751) 69.9 1.4 0.0001 40.6 3.7 34 38-71 22-70 (315)
126 d1goja_ c.37.1.9 (A:) Kinesin 69.6 1.4 0.0001 41.3 3.6 25 46-70 71-97 (354)
127 d1t6na_ c.37.1.19 (A:) Spliceo 69.4 12 0.00089 31.3 9.8 72 258-332 69-151 (207)
128 d1qxna_ c.46.1.3 (A:) Polysulf 68.9 3.7 0.00027 32.4 5.7 38 256-293 80-118 (137)
129 d2avda1 c.66.1.1 (A:44-262) CO 68.6 28 0.002 29.4 12.0 127 38-169 42-172 (219)
130 d1yt8a4 c.46.1.2 (A:243-372) T 68.6 2.7 0.00019 32.9 4.7 39 256-294 78-116 (130)
131 d1tf7a1 c.37.1.11 (A:14-255) C 68.0 1.6 0.00012 37.4 3.5 34 53-86 26-63 (242)
132 d1np6a_ c.37.1.10 (A:) Molybdo 67.5 3 0.00021 33.5 5.0 13 56-68 5-17 (170)
133 d1pzna2 c.37.1.11 (A:96-349) D 67.2 1.9 0.00014 37.4 3.9 23 47-69 25-52 (254)
134 d2zfia1 c.37.1.9 (A:4-352) Kin 66.9 1.9 0.00014 40.2 4.0 24 47-70 79-104 (349)
135 d1tq1a_ c.46.1.3 (A:) Thiosulf 66.9 1.9 0.00014 33.2 3.3 38 257-294 71-109 (119)
136 d1c7na_ c.67.1.3 (A:) Cystalys 66.8 3.9 0.00029 38.3 6.4 143 18-172 41-210 (394)
137 d1sdma_ c.37.1.9 (A:) Kinesin 66.6 1.6 0.00012 41.0 3.4 25 46-70 66-92 (364)
138 d1v8ka_ c.37.1.9 (A:) Kinesin 66.5 1.8 0.00013 40.7 3.7 24 47-70 106-131 (362)
139 d1qhxa_ c.37.1.3 (A:) Chloramp 66.0 2.4 0.00018 34.2 4.1 19 53-71 3-21 (178)
140 d1veca_ c.37.1.19 (A:) DEAD bo 65.9 5.8 0.00042 33.5 6.8 71 257-331 70-151 (206)
141 d1gmxa_ c.46.1.3 (A:) Sulfurtr 65.7 3.7 0.00027 30.8 4.9 46 249-294 48-95 (108)
142 d1x88a1 c.37.1.9 (A:18-362) Ki 65.7 1.7 0.00013 40.4 3.4 25 46-70 72-98 (345)
143 d2ncda_ c.37.1.9 (A:) Kinesin 65.0 1.9 0.00014 40.5 3.6 25 46-70 116-142 (368)
144 d1e6ca_ c.37.1.2 (A:) Shikimat 64.5 2 0.00015 35.1 3.3 21 54-74 3-23 (170)
145 d1ak2a1 c.37.1.1 (A:14-146,A:1 64.2 1.9 0.00014 35.9 3.2 20 53-72 3-22 (190)
146 d1gm5a4 c.37.1.19 (A:550-755) 63.6 3.2 0.00023 35.4 4.5 106 66-192 17-133 (206)
147 d1qvra3 c.37.1.20 (A:536-850) 62.0 1.6 0.00011 40.2 2.2 16 56-71 56-71 (315)
148 d1urha2 c.46.1.2 (A:149-268) 3 61.9 5 0.00037 30.4 5.1 38 256-293 80-118 (120)
149 d1m8pa3 c.37.1.15 (A:391-573) 61.9 1.9 0.00014 35.0 2.6 19 52-70 5-23 (183)
150 d3adka_ c.37.1.1 (A:) Adenylat 60.9 2.7 0.0002 35.1 3.5 22 50-71 5-26 (194)
151 d1g5ta_ c.37.1.11 (A:) ATP:cor 60.6 10 0.00073 30.6 6.9 52 152-206 88-139 (157)
152 d2p6ra4 c.37.1.19 (A:203-403) 60.5 11 0.0008 31.6 7.6 35 105-141 97-131 (201)
153 d1wrba1 c.37.1.19 (A:164-401) 60.2 8.5 0.00062 33.3 6.9 71 258-332 98-178 (238)
154 d1zaka1 c.37.1.1 (A:3-127,A:15 60.0 2.2 0.00016 35.5 2.8 18 55-72 5-22 (189)
155 d1qkka_ c.23.1.1 (A:) Transcri 59.8 34 0.0025 26.3 10.7 46 157-209 43-88 (140)
156 d1qf9a_ c.37.1.1 (A:) UMP/CMP 59.7 2.3 0.00017 35.5 2.8 18 55-72 8-25 (194)
157 d1wp9a1 c.37.1.19 (A:1-200) pu 59.1 18 0.0013 29.5 8.8 70 257-331 51-130 (200)
158 d1ye8a1 c.37.1.11 (A:1-178) Hy 58.8 2.7 0.0002 34.2 3.0 15 55-69 2-16 (178)
159 d1knqa_ c.37.1.17 (A:) Glucona 58.6 2.7 0.00019 33.9 2.9 17 55-71 8-24 (171)
160 d1x6va3 c.37.1.4 (A:34-228) Ad 58.4 1.6 0.00012 36.2 1.6 18 54-71 20-37 (195)
161 d1f9va_ c.37.1.9 (A:) Kinesin 58.3 2.3 0.00017 39.4 2.8 25 47-71 75-101 (342)
162 d1zina1 c.37.1.1 (A:1-125,A:16 58.1 2.7 0.0002 34.4 3.0 17 55-71 2-18 (182)
163 d1s3ga1 c.37.1.1 (A:1-125,A:16 57.6 2.8 0.0002 34.5 3.0 18 55-72 2-19 (182)
164 d1qdea_ c.37.1.19 (A:) Initiat 57.4 5.6 0.00041 33.8 5.0 72 257-333 77-158 (212)
165 d1v5wa_ c.37.1.11 (A:) Meiotic 57.4 2.5 0.00018 36.6 2.7 17 53-69 37-53 (258)
166 d1u0sy_ c.23.1.1 (Y:) CheY pro 57.4 33 0.0024 25.4 11.6 47 158-211 46-92 (118)
167 d1teva_ c.37.1.1 (A:) UMP/CMP 56.7 3 0.00022 34.6 3.0 16 56-71 4-19 (194)
168 d1ukza_ c.37.1.1 (A:) Uridylat 55.9 3.1 0.00023 34.7 3.0 17 56-72 11-27 (196)
169 d1szpa2 c.37.1.11 (A:145-395) 55.8 3.5 0.00026 35.3 3.5 24 46-69 22-50 (251)
170 d1ny5a2 c.37.1.20 (A:138-384) 55.8 3.4 0.00024 36.3 3.3 20 52-71 22-41 (247)
171 d1gkya_ c.37.1.1 (A:) Guanylat 55.5 4.8 0.00035 33.3 4.2 17 54-70 2-18 (186)
172 d2i1qa2 c.37.1.11 (A:65-322) D 55.1 2.5 0.00018 36.3 2.3 18 53-70 34-51 (258)
173 d1gkub1 c.37.1.16 (B:1-250) He 55.0 12 0.00084 32.0 6.9 73 257-331 85-167 (237)
174 d1e4va1 c.37.1.1 (A:1-121,A:15 54.8 3.1 0.00023 34.1 2.8 18 55-72 2-19 (179)
175 d2iyva1 c.37.1.2 (A:2-166) Shi 54.8 3.6 0.00026 33.3 3.1 20 55-74 3-22 (165)
176 d1znwa1 c.37.1.1 (A:20-201) Gu 54.6 3.5 0.00026 34.0 3.1 18 53-70 2-19 (182)
177 d1yt8a1 c.46.1.2 (A:107-242) T 53.9 5.5 0.0004 31.2 4.0 37 257-293 79-117 (136)
178 d1s96a_ c.37.1.1 (A:) Guanylat 53.2 3 0.00022 35.5 2.4 19 52-70 1-19 (205)
179 d1khta_ c.37.1.1 (A:) Adenylat 53.0 2.5 0.00018 34.4 1.9 17 54-70 2-18 (190)
180 d2cdna1 c.37.1.1 (A:1-181) Ade 52.9 3.5 0.00025 33.8 2.8 18 55-72 2-19 (181)
181 d1xjca_ c.37.1.10 (A:) Molybdo 52.5 8.9 0.00065 30.6 5.3 12 57-68 5-16 (165)
182 d1s2ma1 c.37.1.19 (A:46-251) P 52.4 14 0.001 30.8 6.8 72 257-332 68-149 (206)
183 d1jr6a_ c.37.1.14 (A:) HCV hel 52.3 7.3 0.00053 30.6 4.6 54 76-138 33-86 (138)
184 d1akya1 c.37.1.1 (A:3-130,A:16 51.9 4 0.00029 33.5 3.0 18 55-72 4-21 (180)
185 d1ry6a_ c.37.1.9 (A:) Kinesin 51.3 4.3 0.00031 37.3 3.4 19 52-70 82-102 (330)
186 d2ak3a1 c.37.1.1 (A:0-124,A:16 51.3 4.2 0.0003 33.9 3.0 19 54-72 7-25 (189)
187 d1b5pa_ c.67.1.1 (A:) Aspartat 51.2 28 0.002 31.8 9.5 147 17-172 40-210 (382)
188 d1w36b1 c.37.1.19 (B:1-485) Ex 50.1 11 0.0008 35.6 6.5 45 54-98 17-76 (485)
189 d1lvga_ c.37.1.1 (A:) Guanylat 49.9 5.9 0.00043 32.9 3.8 16 55-70 2-17 (190)
190 d1odfa_ c.37.1.6 (A:) Hypothet 49.7 5.4 0.0004 35.8 3.7 15 58-72 32-47 (286)
191 d1rz3a_ c.37.1.6 (A:) Hypothet 48.7 3.6 0.00026 33.9 2.1 14 56-69 25-38 (198)
192 d1yt8a2 c.46.1.2 (A:6-106) Thi 48.4 9.4 0.00069 27.7 4.4 39 256-294 56-95 (101)
193 d1e0ca2 c.46.1.2 (A:136-271) S 47.5 5.9 0.00043 31.1 3.2 38 256-293 86-124 (136)
194 d1susa1 c.66.1.1 (A:21-247) Ca 47.2 77 0.0056 26.6 12.8 66 39-104 43-110 (227)
195 d1u0la2 c.37.1.8 (A:69-293) Pr 46.9 5.2 0.00038 34.5 3.0 31 38-68 80-110 (225)
196 d1wmaa1 c.2.1.2 (A:2-276) Carb 46.6 24 0.0017 30.7 7.8 59 257-315 27-88 (275)
197 d1kgda_ c.37.1.1 (A:) Guanylat 46.6 4.4 0.00032 33.5 2.4 17 54-70 4-20 (178)
198 d2g9na1 c.37.1.19 (A:21-238) I 46.1 4.1 0.0003 34.9 2.1 57 257-316 79-139 (218)
199 d1yrba1 c.37.1.10 (A:1-244) AT 46.0 8.5 0.00062 32.7 4.4 29 56-84 3-33 (244)
200 d1oywa2 c.37.1.19 (A:1-206) Re 45.8 27 0.002 28.6 7.7 59 258-316 65-123 (206)
201 d2pmka1 c.37.1.12 (A:467-707) 44.8 5.4 0.00039 34.8 2.7 19 52-70 28-46 (241)
202 d1yksa2 c.37.1.14 (A:325-623) 44.1 14 0.00099 33.2 5.6 58 76-139 34-91 (299)
203 d1rhsa2 c.46.1.2 (A:150-293) R 43.8 8.8 0.00064 30.3 3.7 39 256-294 89-128 (144)
204 d1ny5a1 c.23.1.1 (A:1-137) Tra 43.5 24 0.0018 27.1 6.5 46 157-209 43-88 (137)
205 d1a1va2 c.37.1.14 (A:326-624) 42.9 7.3 0.00053 35.0 3.3 38 77-114 35-72 (299)
206 d1jj7a_ c.37.1.12 (A:) Peptide 42.8 6 0.00044 34.7 2.7 19 52-70 39-57 (251)
207 d2b2na1 c.37.1.19 (A:26-333) T 42.4 37 0.0027 30.2 8.4 92 256-347 12-121 (308)
208 d1w44a_ c.37.1.11 (A:) NTPase 42.4 5 0.00037 36.7 2.2 15 56-70 126-140 (321)
209 d1sgwa_ c.37.1.12 (A:) Putativ 42.4 6.5 0.00047 33.1 2.8 20 52-71 26-45 (200)
210 d1uj2a_ c.37.1.6 (A:) Uridine- 40.9 5.8 0.00042 33.4 2.3 14 57-70 6-19 (213)
211 d1z3ix1 c.37.1.19 (X:390-735) 40.8 65 0.0047 29.0 10.1 79 61-139 97-179 (346)
212 d1nksa_ c.37.1.1 (A:) Adenylat 40.7 7 0.00051 31.6 2.8 15 56-70 4-18 (194)
213 d1l2ta_ c.37.1.12 (A:) MJ0796 40.7 5.1 0.00037 34.7 1.9 18 52-69 30-47 (230)
214 d1bifa1 c.37.1.7 (A:37-249) 6- 40.6 6 0.00044 32.8 2.4 15 56-70 5-19 (213)
215 d1o4sa_ c.67.1.1 (A:) Aspartat 40.4 41 0.003 30.2 8.8 149 17-174 37-209 (375)
216 d2hyda1 c.37.1.12 (A:324-578) 40.3 5.2 0.00038 35.3 1.9 18 52-69 43-60 (255)
217 d1xhfa1 c.23.1.1 (A:2-122) Aer 40.1 65 0.0048 23.7 9.8 44 158-209 46-89 (121)
218 d1knxa2 c.91.1.2 (A:133-309) H 40.0 9.1 0.00066 31.6 3.3 19 52-70 14-32 (177)
219 d1ckea_ c.37.1.1 (A:) CMP kina 39.7 7.9 0.00057 32.4 3.0 17 56-72 6-22 (225)
220 d1kkma_ c.91.1.2 (A:) HPr kina 39.2 10 0.00074 31.2 3.5 19 52-70 13-31 (176)
221 d2fnaa2 c.37.1.20 (A:1-283) Ar 39.0 9.2 0.00067 32.9 3.5 17 53-69 29-45 (283)
222 d1byia_ c.37.1.10 (A:) Dethiob 38.9 9.6 0.0007 31.7 3.5 31 54-84 2-36 (224)
223 d1ys7a2 c.23.1.1 (A:7-127) Tra 38.8 69 0.005 23.6 9.8 42 158-206 45-86 (121)
224 d1mv5a_ c.37.1.12 (A:) Multidr 38.8 6.5 0.00047 34.3 2.3 19 52-70 27-45 (242)
225 d1wsta1 c.67.1.1 (A:13-415) Mu 38.7 70 0.0051 28.9 10.3 133 34-173 65-218 (403)
226 d1htwa_ c.37.1.18 (A:) Hypothe 38.4 2.8 0.00021 34.2 -0.3 36 56-93 36-73 (158)
227 d1o6ca_ c.87.1.3 (A:) UDP-N-ac 38.3 60 0.0044 29.5 9.6 110 177-294 11-124 (377)
228 d1xx6a1 c.37.1.24 (A:2-142) Th 38.3 9.5 0.0007 30.1 3.1 32 56-88 10-45 (141)
229 d3b60a1 c.37.1.12 (A:329-581) 38.0 7.4 0.00054 34.1 2.6 19 52-70 40-58 (253)
230 d1q3ta_ c.37.1.1 (A:) CMP kina 37.0 9.1 0.00066 32.1 3.0 19 56-74 6-24 (223)
231 d1ko7a2 c.91.1.2 (A:130-298) H 36.4 11 0.0008 30.7 3.2 19 52-70 14-32 (169)
232 d1wp9a2 c.37.1.19 (A:201-486) 36.0 35 0.0025 29.7 7.1 60 77-138 160-227 (286)
233 d1g2912 c.37.1.12 (1:1-240) Ma 35.5 10 0.00075 32.9 3.1 19 52-70 28-46 (240)
234 d2awna2 c.37.1.12 (A:4-235) Ma 34.7 11 0.00081 32.5 3.1 19 52-70 25-43 (232)
235 d3dhwc1 c.37.1.12 (C:1-240) Me 34.2 6.9 0.0005 34.1 1.6 18 52-69 30-47 (240)
236 d1sq5a_ c.37.1.6 (A:) Pantothe 34.2 15 0.0011 33.2 4.0 15 56-70 83-97 (308)
237 d1o5za1 c.59.1.2 (A:294-430) F 34.1 33 0.0024 26.1 5.8 49 161-216 12-60 (137)
238 d3d31a2 c.37.1.12 (A:1-229) Su 33.8 11 0.00077 32.6 2.8 25 52-76 25-50 (229)
239 d1r0wa_ c.37.1.12 (A:) Cystic 33.7 10 0.00075 33.7 2.8 18 53-70 62-79 (281)
240 d2c07a1 c.2.1.2 (A:54-304) bet 33.6 66 0.0048 27.3 8.5 67 249-316 26-95 (251)
241 d1rrma_ e.22.1.2 (A:) Lactalde 33.1 30 0.0022 31.8 6.3 72 243-314 15-93 (385)
242 d2vp4a1 c.37.1.1 (A:12-208) De 31.6 15 0.0011 30.1 3.4 30 56-87 12-43 (197)
243 d1w1wa_ c.37.1.12 (A:) Smc hea 31.1 9.7 0.00071 35.4 2.3 15 56-70 28-42 (427)
244 d2fh5b1 c.37.1.8 (B:63-269) Si 31.1 8.5 0.00062 32.0 1.7 15 54-68 1-15 (207)
245 d1j32a_ c.67.1.1 (A:) Aspartat 31.0 43 0.0032 30.5 7.2 147 18-173 40-210 (388)
246 d1f6da_ c.87.1.3 (A:) UDP-N-ac 30.9 1.2E+02 0.0084 27.4 10.2 140 177-326 9-165 (376)
247 d1v43a3 c.37.1.12 (A:7-245) Hy 30.8 14 0.001 32.0 3.1 19 52-70 31-49 (239)
248 d1nn5a_ c.37.1.1 (A:) Thymidyl 30.8 44 0.0032 27.6 6.5 16 53-68 3-18 (209)
249 d1ji0a_ c.37.1.12 (A:) Branche 29.9 12 0.00084 32.5 2.4 20 52-71 31-50 (240)
250 d1yb1a_ c.2.1.2 (A:) 17-beta-h 29.7 1.2E+02 0.0089 25.3 9.6 86 51-138 5-92 (244)
251 d4tmka_ c.37.1.1 (A:) Thymidyl 29.7 25 0.0018 28.9 4.7 17 53-69 2-18 (210)
252 g1xew.1 c.37.1.12 (X:,Y:) Smc 29.5 8.3 0.00061 34.6 1.4 15 56-70 29-43 (329)
253 d1z5za1 c.37.1.19 (A:663-906) 29.5 1.1E+02 0.0084 25.3 9.4 81 61-142 65-149 (244)
254 d1oxxk2 c.37.1.12 (K:1-242) Gl 29.4 11 0.00077 32.8 2.0 20 52-71 30-49 (242)
255 d2gc6a1 c.59.1.2 (A:297-425) F 28.9 34 0.0025 25.5 5.0 39 161-206 13-51 (129)
256 d1ae1a_ c.2.1.2 (A:) Tropinone 28.6 1.6E+02 0.012 24.7 10.5 67 249-316 22-92 (258)
257 d1yt8a3 c.46.1.2 (A:373-529) T 28.3 11 0.00084 30.0 2.0 38 256-293 56-94 (157)
258 d1vhta_ c.37.1.1 (A:) Dephosph 28.2 13 0.00092 31.2 2.3 26 56-83 6-31 (208)
259 d1xpua3 c.37.1.11 (A:129-417) 28.0 23 0.0016 31.5 4.1 26 45-70 32-60 (289)
260 d1tuea_ c.37.1.20 (A:) Replica 28.0 18 0.0013 30.4 3.1 47 21-70 20-70 (205)
261 d1gdea_ c.67.1.1 (A:) Aromatic 27.8 1.2E+02 0.0089 26.9 9.9 141 19-172 36-205 (388)
262 d1jjva_ c.37.1.1 (A:) Dephosph 27.8 14 0.001 30.7 2.6 25 57-83 6-30 (205)
263 d1bw0a_ c.67.1.1 (A:) Tyrosine 27.6 1.1E+02 0.0079 27.6 9.5 144 20-173 46-221 (412)
264 d1r8sa_ c.37.1.8 (A:) ADP-ribo 27.6 11 0.00082 29.2 1.8 13 56-68 3-15 (160)
265 d1qhla_ c.37.1.12 (A:) Cell di 27.6 4.1 0.0003 33.4 -1.1 14 57-70 28-41 (222)
266 d1peya_ c.23.1.1 (A:) Sporulat 27.5 1.1E+02 0.0077 22.3 10.9 46 158-210 45-90 (119)
267 d1g0oa_ c.2.1.2 (A:) 1,3,8-tri 27.5 1.3E+02 0.0097 25.3 9.6 69 249-318 34-106 (272)
268 d2onka1 c.37.1.12 (A:1-240) Mo 27.3 17 0.0012 31.4 3.0 15 56-70 27-41 (240)
269 d1h65a_ c.37.1.8 (A:) Chloropl 27.0 14 0.001 32.1 2.5 15 55-69 34-48 (257)
270 d1b0ua_ c.37.1.12 (A:) ATP-bin 26.3 17 0.0012 31.8 2.8 19 52-70 27-45 (258)
271 d1uara2 c.46.1.2 (A:145-285) S 26.2 17 0.0013 28.4 2.7 46 248-293 76-126 (141)
272 d1ulua_ c.2.1.2 (A:) Enoyl-ACP 26.2 96 0.007 26.0 8.2 34 51-86 6-42 (256)
273 d1d2fa_ c.67.1.3 (A:) Modulato 26.1 1.1E+02 0.0083 26.8 9.2 143 19-173 10-180 (361)
274 d1vp8a_ c.49.1.2 (A:) Hypothet 25.8 30 0.0022 28.2 4.0 72 244-319 19-98 (190)
275 d1uf9a_ c.37.1.1 (A:) Dephosph 25.5 14 0.001 30.1 2.1 15 57-71 7-21 (191)
276 g1f2t.1 c.37.1.12 (A:,B:) Rad5 25.3 15 0.0011 31.8 2.4 15 56-70 26-40 (292)
277 d1ksha_ c.37.1.8 (A:) ADP-ribo 25.2 13 0.00096 29.3 1.8 14 55-68 4-17 (165)
278 d2rhca1 c.2.1.2 (A:5-261) beta 25.1 94 0.0068 26.2 7.9 66 249-315 18-86 (257)
279 d1kgsa2 c.23.1.1 (A:2-123) Pho 24.9 1.2E+02 0.0087 22.1 9.6 44 157-207 44-87 (122)
280 d2a9pa1 c.23.1.1 (A:2-118) DNA 24.8 1.2E+02 0.0086 21.9 10.8 44 158-209 44-87 (117)
281 d1yb1a_ c.2.1.2 (A:) 17-beta-h 24.7 95 0.0069 26.1 7.8 69 248-317 22-93 (244)
282 d1edoa_ c.2.1.2 (A:) beta-keto 24.4 1.2E+02 0.0085 25.4 8.4 57 259-315 26-86 (244)
283 d1l7vc_ c.37.1.12 (C:) ABC tra 24.3 15 0.0011 31.5 2.1 19 52-70 24-42 (231)
284 d1f6ba_ c.37.1.8 (A:) SAR1 {Ch 24.1 11 0.00081 30.1 1.1 14 55-68 15-28 (186)
285 d2qtvb1 c.37.1.8 (B:24-189) SA 24.1 14 0.001 28.5 1.8 13 56-68 3-15 (166)
286 d1vlja_ e.22.1.2 (A:) NADH-dep 23.9 1E+02 0.0074 28.0 8.4 72 244-315 20-99 (398)
287 d1fmca_ c.2.1.2 (A:) 7-alpha-h 23.9 81 0.0059 26.7 7.2 66 249-315 27-95 (255)
288 d1mkya1 c.37.1.8 (A:2-172) Pro 23.7 15 0.0011 29.3 1.8 14 55-68 2-15 (171)
289 g1ii8.1 c.37.1.12 (A:,B:) Rad5 23.6 17 0.0012 32.2 2.4 15 56-70 26-40 (369)
290 d1gega_ c.2.1.2 (A:) meso-2,3- 23.5 1.1E+02 0.0079 25.7 8.0 67 249-316 17-86 (255)
291 d1c9ka_ c.37.1.11 (A:) Adenosy 23.5 33 0.0024 28.0 4.0 31 56-87 2-32 (180)
292 d1wmsa_ c.37.1.8 (A:) Rab9a {H 23.3 16 0.0012 29.2 2.0 13 56-68 9-21 (174)
293 d1zema1 c.2.1.2 (A:3-262) Xyli 22.7 87 0.0064 26.5 7.2 67 249-316 21-90 (260)
294 d1xi9a_ c.67.1.1 (A:) Putative 22.5 65 0.0047 29.2 6.6 110 55-172 95-212 (395)
295 d1p5zb_ c.37.1.1 (B:) Deoxycyt 22.5 23 0.0017 29.7 3.0 32 54-87 3-36 (241)
296 g1qtn.1 c.17.1.1 (A:,B:) Caspa 22.5 81 0.0059 26.4 6.8 37 269-306 43-79 (242)
297 d1urha1 c.46.1.2 (A:2-148) 3-m 22.3 39 0.0029 26.2 4.2 51 244-294 71-123 (147)
298 d1qo0d_ c.23.1.3 (D:) Positive 22.0 1.7E+02 0.012 22.8 10.3 89 76-212 9-97 (189)
299 d1geea_ c.2.1.2 (A:) Glucose d 21.9 1.6E+02 0.011 24.8 8.8 67 249-316 23-93 (261)
300 d3raba_ c.37.1.8 (A:) Rab3a {R 21.9 17 0.0012 28.9 1.8 13 56-68 8-20 (169)
301 d2jdid3 c.37.1.11 (D:82-357) C 21.8 48 0.0035 29.0 5.1 27 45-71 57-86 (276)
302 d1ja9a_ c.2.1.2 (A:) 1,3,6,8-t 21.8 1.6E+02 0.011 24.6 8.8 68 249-317 22-93 (259)
303 d2cl5a1 c.66.1.1 (A:3-216) Cat 21.7 2E+02 0.014 23.4 12.4 66 38-103 39-106 (214)
304 d2cxxa1 c.37.1.8 (A:2-185) GTP 21.7 13 0.00096 29.8 1.1 15 55-69 2-16 (184)
305 d2bd0a1 c.2.1.2 (A:2-241) Bact 21.6 1.5E+02 0.011 24.6 8.5 55 261-315 35-92 (240)
306 d2atva1 c.37.1.8 (A:5-172) Ras 21.4 18 0.0013 28.8 1.8 13 56-68 5-17 (168)
307 d1svia_ c.37.1.8 (A:) Probable 21.4 15 0.0011 30.0 1.4 14 55-68 25-38 (195)
308 d1z06a1 c.37.1.8 (A:32-196) Ra 21.4 18 0.0013 28.5 1.8 13 56-68 5-17 (165)
309 d1nija1 c.37.1.10 (A:2-223) Hy 21.3 30 0.0022 29.0 3.5 13 56-68 6-18 (222)
310 d1m7ga_ c.37.1.4 (A:) Adenosin 21.3 18 0.0013 30.3 1.9 17 54-70 25-41 (208)
311 d2b8ea1 c.108.1.7 (A:416-434,A 21.1 1.1E+02 0.0083 23.0 6.8 58 247-309 27-84 (135)
312 d2p67a1 c.37.1.10 (A:1-327) LA 21.1 43 0.0032 30.0 4.8 13 56-68 57-69 (327)
313 d1nrjb_ c.37.1.8 (B:) Signal r 20.9 18 0.0013 29.7 1.8 14 55-68 5-18 (209)
314 d1vpla_ c.37.1.12 (A:) Putativ 20.8 22 0.0016 30.5 2.5 19 52-70 27-45 (238)
315 g1pyo.1 c.17.1.1 (A:,B:) Caspa 20.8 71 0.0052 27.1 6.1 49 257-306 25-87 (257)
316 d1g6ha_ c.37.1.12 (A:) MJ1267 20.8 24 0.0018 30.6 2.7 19 52-70 29-47 (254)
317 d1z2aa1 c.37.1.8 (A:8-171) Rab 20.6 18 0.0013 28.4 1.8 13 56-68 5-17 (164)
318 d2f7sa1 c.37.1.8 (A:5-190) Rab 20.5 19 0.0014 29.0 1.8 13 56-68 8-20 (186)
319 d2a5ja1 c.37.1.8 (A:9-181) Rab 20.2 19 0.0014 28.7 1.8 13 56-68 6-18 (173)
320 d1v4va_ c.87.1.3 (A:) UDP-N-ac 20.1 1.9E+02 0.014 25.7 9.5 106 177-292 11-122 (373)
321 d1xq1a_ c.2.1.2 (A:) Tropinone 20.1 1.7E+02 0.012 24.5 8.6 67 249-316 24-94 (259)
322 d1okga1 c.46.1.2 (A:7-162) 3-m 20.0 54 0.004 25.8 4.6 47 248-294 76-127 (156)
No 1
>d1oywa3 c.37.1.19 (A:207-406) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=3.3e-42 Score=318.95 Aligned_cols=200 Identities=35% Similarity=0.604 Sum_probs=180.9
Q ss_pred cCCCCcceEEEEeeCchhhHHHHHHHHHHhcCCccEEEEeCccccHHHHHHHHHhCCCceEEEcCCCCHHHHHHHHHHHh
Q 009843 226 SFNRPNLFYEVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWI 305 (524)
Q Consensus 226 ~~~~~~l~~~v~~~~~~~~~~~~l~~~l~~~~~~~~IIf~~s~~~~e~l~~~L~~~g~~~~~~h~~l~~~~R~~~~~~f~ 305 (524)
+|+||||.|.+..+. ++++.|.++++...+.++||||+|++.++.++..|...|+.+..+||+++.++|..+++.|+
T Consensus 1 s~~RpNi~y~v~~~~---~k~~~L~~~l~~~~~~~~IIF~~t~~~~~~l~~~l~~~~~~~~~~h~~~~~~~r~~~~~~f~ 77 (200)
T d1oywa3 1 SFDRPNIRYMLMEKF---KPLDQLMRYVQEQRGKSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQ 77 (200)
T ss_dssp CCCCTTEEEEEEECS---SHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHHHHTTCCEEEECTTSCHHHHHHHHHHHH
T ss_pred CCCCCCcEEEEEcCC---cHHHHHHHHHHhcCCCCEEEEEeeehhhHHhhhhhccCCceeEEecCCCcHHHHHHHHHHHh
Confidence 589999999987764 57888999999888889999999999999999999999999999999999999999999999
Q ss_pred cCCCcEEEEcccccccccCCCccEEEEeCCCCCHHHHHHHHhhcCCCCCCceEEEEeccccHHHHHHHHHhccCCCCcch
Q 009843 306 SSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSF 385 (524)
Q Consensus 306 ~g~~~VlVaT~a~~~GiD~p~v~~VI~~~~p~s~~~y~Q~~GRagR~G~~~~~i~~~~~~d~~~~~~l~~~~~~~~~~~~ 385 (524)
+|+++|||||++++||||+|+|++||||++|.|+++|+||+||+||+|++|.|++|+.+.|...++.+++..... ....
T Consensus 78 ~g~~~ilvaTd~~~~GiD~p~v~~VI~~~~P~~~~~y~qr~GR~gR~g~~g~ai~~~~~~d~~~l~~~i~~~~~~-~~~~ 156 (200)
T d1oywa3 78 RDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQG-QLQD 156 (200)
T ss_dssp TTSCSEEEECTTSCTTTCCTTCCEEEESSCCSSHHHHHHHHTTSCTTSSCEEEEEEECHHHHHHHHHHHHTSCCS-HHHH
T ss_pred cccceEEEecchhhhccCCCCCCEEEECCCccchHHHHHHhhhhhcCCCCceEEEecCHHHHHHHHhhhhccccc-cchh
Confidence 999999999999999999999999999999999999999999999999999999999999999998888664332 2233
Q ss_pred hhHHHHHHHHHhhhccChhHHHHhcCcCCCCCCCCCcccchhccccccccccCCcCCCCcccCCCCCCCCC
Q 009843 386 STRERWLITVKVLDVAGKRFSRVLGNRYWDVWPVLPIGWFLSLVLLYYSFHLLKQIPVSLCKNSCDACKHP 456 (524)
Q Consensus 386 ~~~~~l~~~~~~~~~~~crr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~e~~~~~~c~~~Cd~c~~~ 456 (524)
.....+..|..|++...|||..|++ || ||.. ..+|+ +||+|.+|
T Consensus 157 ~~~~~~~~m~~~~~~~~Crr~~ll~-----------------------~f--ge~~-~~~C~-~CD~C~~p 200 (200)
T d1oywa3 157 IERHKLNAMGAFAEAQTCRRLVLLN-----------------------YF--GEGR-QEPCG-NCDICLDP 200 (200)
T ss_dssp HHHHHHHHHHHHHTCSSCHHHHHHH-----------------------HT--TCCC-CSCCS-CBHHHHSC
T ss_pred hhHHHHHHHHHHHhchhhHHHHHHH-----------------------Hc--CCCC-CCCCC-CCCCCCCC
Confidence 4456678999999999999999999 99 8875 35677 79999876
No 2
>d1oywa2 c.37.1.19 (A:1-206) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=8.2e-33 Score=258.25 Aligned_cols=202 Identities=45% Similarity=0.769 Sum_probs=177.9
Q ss_pred cCCCCChhHHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCEEEEcCCCChHHHHHHHHHhcCCCeEEEeCcHHHHHHHHH
Q 009843 16 KNKPLHEKEALVKLLRWHFGHAQFRDKQLDAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAKPGIVLVVSPLIALMENQV 95 (524)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~fg~~~~r~~Q~~~i~~~l~g~d~lv~apTGsGKTl~~~lp~l~~~~~~lvl~P~~~L~~q~~ 95 (524)
+.+.+++.+.+...|++.|||++|||+|.++|+++++|+|+++++|||+|||++|.+|++...+++++++|+++|.+|+.
T Consensus 3 ~~e~~~l~~~~~~~l~~~fg~~~~rp~Q~~ai~~~l~g~~vlv~apTGsGKT~~~~~~~~~~~~~~~~v~P~~~L~~q~~ 82 (206)
T d1oywa2 3 QAEVLNLESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTVVVSPLISLMKDQV 82 (206)
T ss_dssp CCCCSSHHHHHHHHHHHTTCCSSCCTTHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHSSSEEEEECSCHHHHHHHH
T ss_pred chhhCCCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHcCCCEEEEcCCCCCCcchhhhhhhhccCceEEeccchhhhhhHH
Confidence 34668899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCceeEeccCCCHHHHHHHHHHhhcCCCcccEEEeCcccccChhhHHHHHhhhccCCccEEEEeccccccccCC
Q 009843 96 IGLKEKGIAGEFLSSTQTMQVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGH 175 (524)
Q Consensus 96 ~~l~~~gi~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ll~~tpe~v~t~~~~~~l~~~~~~~~l~~iViDEaH~i~~~g~ 175 (524)
+.++..+........................+. ..+++.||+.+...... .......++++|+||||++.+||+
T Consensus 83 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~t~~~~~~~~~~----~~~~~~~v~~lviDEaH~~~~~~~ 156 (206)
T d1oywa2 83 DQLQANGVAAACLNSTQTREQQLEVMTGCRTGQ--IRLLYIAPERLMLDNFL----EHLAHWNPVLLAVDEAHCISQWGH 156 (206)
T ss_dssp HHHHHTTCCEEEECTTSCHHHHHHHHHHHHHTC--CSEEEECHHHHTSTTHH----HHHTTSCEEEEEESSGGGGCTTSS
T ss_pred HHHHhhcccccccccccccccchhHHHHHhcCC--ceEEEEechhhhchhhc----ccchhheeeeeeeeeeeeeecccc
Confidence 999999988888777777766666655555554 67888998876554332 233445699999999999999999
Q ss_pred CCHHHHHHHHHHHHhCCCCCEEEEeccCChhHHHHHHHHhCCCCCeEE
Q 009843 176 DFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVL 223 (524)
Q Consensus 176 ~fr~~~~~l~~l~~~~~~~~ii~lSAT~~~~~~~~i~~~l~l~~~~~~ 223 (524)
.++..|..+..++..+|++|+++||||+++.+.+++.+.|++.+|.+.
T Consensus 157 ~~~~~~~~~~~l~~~~~~~~ii~lSATl~~~v~~di~~~L~l~~p~v~ 204 (206)
T d1oywa2 157 DFRPEYAALGQLRQRFPTLPFMALTATADDTTRQDIVRLLGLNDPLIQ 204 (206)
T ss_dssp CCCHHHHGGGGHHHHCTTSCEEEEESCCCHHHHHHHHHHHTCCSCEEE
T ss_pred chHHHHHHHHHHHHhCCCCceEEEEeCCCHHHHHHHHHHcCCCCCcEE
Confidence 999999999999999999999999999999999999999999999654
No 3
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus type 2 [TaxId: 11060]}
Probab=100.00 E-value=1.3e-34 Score=286.73 Aligned_cols=270 Identities=16% Similarity=0.096 Sum_probs=182.5
Q ss_pred HcCCCEEEEcCCCChHHHHHHHHHhc----CCCeEEEeCcHHHHHHHHHHHHHHcCCceeEeccCCCHHHHHHHHHHhhc
Q 009843 51 LSGRDCFCLMPTGGGKSMCYQIPALA----KPGIVLVVSPLIALMENQVIGLKEKGIAGEFLSSTQTMQVKTKIYEDLDS 126 (524)
Q Consensus 51 l~g~d~lv~apTGsGKTl~~~lp~l~----~~~~~lvl~P~~~L~~q~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~l~~ 126 (524)
.+|+++++.||||+|||++|+.+++. ++.++||++|+++|++|+.++|+.+++........ ....
T Consensus 7 ~~~~~~lv~~~TGsGKT~~~l~~~~~~~~~~~~~~lvi~Ptr~La~q~~~~l~~~~~~~~~~~~~-----------~~~~ 75 (305)
T d2bmfa2 7 RKKRLTIMDLHPGAGKTKRYLPAIVREAIKRGLRTLILAPTRVVAAEMEEALRGLPIRYQTPAIR-----------AEHT 75 (305)
T ss_dssp STTCEEEECCCTTSSTTTTHHHHHHHHHHHHTCCEEEEESSHHHHHHHHHHTTTSCCBCCC-------------------
T ss_pred hcCCcEEEEECCCCCHHHHHHHHHHHHHHhcCCEEEEEccHHHHHHHHHHHHhcCCcceeeeEEe-----------eccc
Confidence 47889999999999999998766653 47899999999999999999998876543222110 1111
Q ss_pred CCCcccEEEeCcccccChhhHHHHHhhhccCCccEEEEeccccccccCCCCHHHHHHHHHHHHhCCCCCEEEEeccCChh
Q 009843 127 GKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPK 206 (524)
Q Consensus 127 ~~~~~~ll~~tpe~v~t~~~~~~l~~~~~~~~l~~iViDEaH~i~~~g~~fr~~~~~l~~l~~~~~~~~ii~lSAT~~~~ 206 (524)
. ...+.++|+..+ ...+........++++||||||++..|+..++..+..+ ...++.+++++|||++..
T Consensus 76 ~--~~~i~~~t~~~l-----~~~~~~~~~~~~~~~vViDE~H~~~~~~~~~~~~l~~~----~~~~~~~~v~~SAT~~~~ 144 (305)
T d2bmfa2 76 G--REIVDLMCHATF-----TMRLLSPIRVPNYNLIIMDEAHFTDPASIAARGYISTR----VEMGEAAGIFMTATPPGS 144 (305)
T ss_dssp C--CCSEEEEEHHHH-----HHHHTSSSCCCCCSEEEEESTTCCSHHHHHHHHHHHHH----HHHTSCEEEEECSSCTTC
T ss_pred C--ccccccCCcHHH-----HHHHhcCccccceeEEEeeeeeecchhhHHHHHHHHHh----hccccceEEEeecCCCcc
Confidence 1 244555555432 11222233345699999999999998886555433222 223578899999998654
Q ss_pred HHHHHHHHhCCCCCeEEeccCCCCcceEEEEeeCchhhHHHHHHHHHHhcCCccEEEEeCccccHHHHHHHHHhCCCceE
Q 009843 207 VQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCA 286 (524)
Q Consensus 207 ~~~~i~~~l~l~~~~~~~~~~~~~~l~~~v~~~~~~~~~~~~l~~~l~~~~~~~~IIf~~s~~~~e~l~~~L~~~g~~~~ 286 (524)
... .......+.. ...... ..........+.. .++++||||+++++++++++.|++.|+.+.
T Consensus 145 ~~~-----~~~~~~~~~~----------~~~~~~--~~~~~~~~~~~~~-~~~~~lvf~~~~~~~~~l~~~L~~~~~~~~ 206 (305)
T d2bmfa2 145 RDP-----FPQSNAPIMD----------EEREIP--ERSWNSGHEWVTD-FKGKTVWFVPSIKAGNDIAACLRKNGKKVI 206 (305)
T ss_dssp CCS-----SCCCSSCEEE----------EECCCC--CSCCSSCCHHHHS-SCSCEEEECSCHHHHHHHHHHHHHHTCCCE
T ss_pred eee-----ecccCCcceE----------EEEecc--HHHHHHHHHHHHh-hCCCEEEEeccHHHHHHHHHHHHhCCCCEE
Confidence 211 0011111110 000000 0000001112232 456799999999999999999999999999
Q ss_pred EEcCCCCHHHHHHHHHHHhcCCCcEEEEcccccccccCCCccEEE----------EeC----------CCCCHHHHHHHH
Q 009843 287 AYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVC----------HFN----------IPKSMEAFYQES 346 (524)
Q Consensus 287 ~~h~~l~~~~R~~~~~~f~~g~~~VlVaT~a~~~GiD~p~v~~VI----------~~~----------~p~s~~~y~Q~~ 346 (524)
.+||++....+ ..|.+|..+++|||+++++|+|++ ++.|| +++ .|.|.++|+||+
T Consensus 207 ~l~~~~~~~~~----~~~~~~~~~~lvaT~~~~~G~~~~-~~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Qr~ 281 (305)
T d2bmfa2 207 QLSRKTFDSEY----IKTRTNDWDFVVTTDISEMGANFK-AERVIDPRRCMKPVILTDGEERVILAGPMPVTHSSAAQRR 281 (305)
T ss_dssp ECCTTCHHHHG----GGGGTSCCSEEEECGGGGTTCCCC-CSEEEECCEEEEEEEECSSSCEEEEEEEEECCHHHHHHHH
T ss_pred EeCCcChHHHH----hhhhccchhhhhhhHHHHhcCCCC-ccEEEEcCCceeeeEecCCCCceEEeccccCCHHHHhhhh
Confidence 99999866543 467899999999999999999994 44444 233 467999999999
Q ss_pred hhcCCCCCCceEEEEeccc
Q 009843 347 GRAGRDQLPSKSLLYYGMD 365 (524)
Q Consensus 347 GRagR~G~~~~~i~~~~~~ 365 (524)
||+||+|+.+...++|...
T Consensus 282 GR~GR~~~~~~~~~~~~~~ 300 (305)
T d2bmfa2 282 GRVGRNPKNENDQYIYMGE 300 (305)
T ss_dssp TTSSCSSSCCCEEEEECSC
T ss_pred cCcCcCCCCceEEEEECCC
Confidence 9999999999888888654
No 4
>d2j0sa2 c.37.1.19 (A:244-411) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96 E-value=6.8e-29 Score=222.94 Aligned_cols=149 Identities=19% Similarity=0.339 Sum_probs=138.0
Q ss_pred CcceEEEEeeCchhhHHHHHHHHHHhcCCccEEEEeCccccHHHHHHHHHhCCCceEEEcCCCCHHHHHHHHHHHhcCCC
Q 009843 230 PNLFYEVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 309 (524)
Q Consensus 230 ~~l~~~v~~~~~~~~~~~~l~~~l~~~~~~~~IIf~~s~~~~e~l~~~L~~~g~~~~~~h~~l~~~~R~~~~~~f~~g~~ 309 (524)
.|+...+...+....++..|.++++...+.++||||++++.++.+++.|...|+.+..+||+++.++|..+++.|++|++
T Consensus 6 ~~i~q~~v~v~~~~~K~~~L~~ll~~~~~~k~iiF~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~fk~g~~ 85 (168)
T d2j0sa2 6 EGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGAS 85 (168)
T ss_dssp TTEEEEEEEESSTTHHHHHHHHHHHHHTSSEEEEECSSHHHHHHHHHHHHHTTCCCEEECTTSCHHHHHHHHHHHHHTSS
T ss_pred CCcEEEEEEecChHHHHHHHHHHHHhCCCCceEEEeeeHHHHHHHHHHhhhcccchhhhhhhhhHHHHHHHHHHHhcCCc
Confidence 56665555555556799999999999888899999999999999999999999999999999999999999999999999
Q ss_pred cEEEEcccccccccCCCccEEEEeCCCCCHHHHHHHHhhcCCCCCCceEEEEeccccHHHHHHHHHhcc
Q 009843 310 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQ 378 (524)
Q Consensus 310 ~VlVaT~a~~~GiD~p~v~~VI~~~~p~s~~~y~Q~~GRagR~G~~~~~i~~~~~~d~~~~~~l~~~~~ 378 (524)
++||||+++++|||+|++++|||||+|++.+.|+||+||+||.|+.|.+++|+.++|...++.+.+...
T Consensus 86 ~iLv~Td~~~rGiDi~~v~~VIn~d~P~~~~~yihR~GR~gR~g~~G~~i~~~~~~d~~~~~~i~~~~~ 154 (168)
T d2j0sa2 86 RVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYS 154 (168)
T ss_dssp CEEEECGGGSSSCCCTTEEEEEESSCCSSHHHHHHHHTTSSGGGCCEEEEEEEEGGGHHHHHHHHHHTT
T ss_pred cEEeccchhcccccccCcceEEEecCCcCHHHHHhhhccccccCCCcEEEEEECHHHHHHHHHHHHHHc
Confidence 999999999999999999999999999999999999999999999999999999999988887766544
No 5
>d1fuka_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.96 E-value=5.7e-29 Score=222.20 Aligned_cols=140 Identities=20% Similarity=0.354 Sum_probs=127.4
Q ss_pred hhhHHHHHHHHHHhcCCccEEEEeCccccHHHHHHHHHhCCCceEEEcCCCCHHHHHHHHHHHhcCCCcEEEEccccccc
Q 009843 242 LDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMG 321 (524)
Q Consensus 242 ~~~~~~~l~~~l~~~~~~~~IIf~~s~~~~e~l~~~L~~~g~~~~~~h~~l~~~~R~~~~~~f~~g~~~VlVaT~a~~~G 321 (524)
.+.+++.|.++++..+..++||||+|+..++.+++.|...|+.+..+||+++..+|..+++.|++|+.+|||||+++++|
T Consensus 11 ~e~K~~~L~~ll~~~~~~k~iIF~~s~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~l~~f~~~~~~iLv~Tdv~~rG 90 (162)
T d1fuka_ 11 EEYKYECLTDLYDSISVTQAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRILISTDLLARG 90 (162)
T ss_dssp GGGHHHHHHHHHHHTTCSCEEEEESSHHHHHHHHHHHHHTTCCEEEECTTSCHHHHHHHHHHHHTTSCSEEEEEGGGTTT
T ss_pred cHHHHHHHHHHHHhCCCCcEEEEEEEEchHHHHHHHHhhcCceEEEeccCCchhhHHHHHHHHhhcccceeecccccccc
Confidence 35789999999999888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCccEEEEeCCCCCHHHHHHHHhhcCCCCCCceEEEEeccccHHHHHHHHHhccCCC
Q 009843 322 IDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKN 381 (524)
Q Consensus 322 iD~p~v~~VI~~~~p~s~~~y~Q~~GRagR~G~~~~~i~~~~~~d~~~~~~l~~~~~~~~ 381 (524)
+|+|+|++||+||+|++++.|+||+||+||.|+.|.|+++++++|...+..+.+......
T Consensus 91 iDi~~v~~VI~~d~P~~~~~yihR~GR~gR~g~~g~~i~~~~~~d~~~~~~i~~~~~~~~ 150 (162)
T d1fuka_ 91 IDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTNEDVGAMRELEKFYSTQI 150 (162)
T ss_dssp CCCCSCSEEEESSCCSSGGGGGGSSCSCC-----CEEEEEEETTTHHHHHHHHHHSSCCC
T ss_pred ccCCCceEEEEeccchhHHHHHhhccccccCCCccEEEEEcCHHHHHHHHHHHHHHcCcC
Confidence 999999999999999999999999999999999999999999999998888877655443
No 6
>d1hv8a2 c.37.1.19 (A:211-365) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=99.95 E-value=7.9e-28 Score=213.52 Aligned_cols=147 Identities=21% Similarity=0.429 Sum_probs=133.2
Q ss_pred CcceEEEEeeCchhhHHHHHHHHHHhcCCccEEEEeCccccHHHHHHHHHhCCCceEEEcCCCCHHHHHHHHHHHhcCCC
Q 009843 230 PNLFYEVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 309 (524)
Q Consensus 230 ~~l~~~v~~~~~~~~~~~~l~~~l~~~~~~~~IIf~~s~~~~e~l~~~L~~~g~~~~~~h~~l~~~~R~~~~~~f~~g~~ 309 (524)
+|+.+.+...+. .++++.|.++++.. +.++||||+|++.|+.+++.|++.|+.+..+|++++..+|..++++|++|+.
T Consensus 2 ~nI~~~~i~v~~-~~K~~~L~~ll~~~-~~k~IIF~~s~~~~~~l~~~L~~~g~~~~~~~~~~~~~~r~~~~~~f~~~~~ 79 (155)
T d1hv8a2 2 ANIEQSYVEVNE-NERFEALCRLLKNK-EFYGLVFCKTKRDTKELASMLRDIGFKAGAIHGDLSQSQREKVIRLFKQKKI 79 (155)
T ss_dssp SSSEEEEEECCG-GGHHHHHHHHHCST-TCCEEEECSSHHHHHHHHHHHHHTTCCEEEECSSSCHHHHHHHHHHHHTTSS
T ss_pred CCeEEEEEEeCh-HHHHHHHHHHHccC-CCCEEEEECchHHHHHHHhhhcccccccccccccchhhhhhhhhhhhhcccc
Confidence 456555555543 57899999998764 4579999999999999999999999999999999999999999999999999
Q ss_pred cEEEEcccccccccCCCccEEEEeCCCCCHHHHHHHHhhcCCCCCCceEEEEeccccHHHHHHHHHhcc
Q 009843 310 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQ 378 (524)
Q Consensus 310 ~VlVaT~a~~~GiD~p~v~~VI~~~~p~s~~~y~Q~~GRagR~G~~~~~i~~~~~~d~~~~~~l~~~~~ 378 (524)
+|||||+++++|||+|++++||||++|+|+..|+||+||+||.|++|.+++++++.|...++.+.+...
T Consensus 80 ~ilv~T~~~~~Gid~~~v~~Vi~~d~p~~~~~y~qr~GR~gR~g~~g~~i~~~~~~d~~~~~~i~~~~~ 148 (155)
T d1hv8a2 80 RILIATDVMSRGIDVNDLNCVINYHLPQNPESYMHRIGRTGRAGKKGKAISIINRREYKKLRYIERAMK 148 (155)
T ss_dssp SEEEECTTHHHHCCCSCCSEEEESSCCSCHHHHHHHSTTTCCSSSCCEEEEEECTTSHHHHHHHHHHHT
T ss_pred eeeeehhHHhhhhhhccCcEEEEecCCCCHHHHHHHHHhcCcCCCCceEEEEEchHHHHHHHHHHHHHC
Confidence 999999999999999999999999999999999999999999999999999999999888887765543
No 7
>d1s2ma2 c.37.1.19 (A:252-422) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.95 E-value=1.3e-27 Score=215.52 Aligned_cols=150 Identities=19% Similarity=0.306 Sum_probs=136.1
Q ss_pred CcceEEEEeeCchhhHHHHHHHHHHhcCCccEEEEeCccccHHHHHHHHHhCCCceEEEcCCCCHHHHHHHHHHHhcCCC
Q 009843 230 PNLFYEVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 309 (524)
Q Consensus 230 ~~l~~~v~~~~~~~~~~~~l~~~l~~~~~~~~IIf~~s~~~~e~l~~~L~~~g~~~~~~h~~l~~~~R~~~~~~f~~g~~ 309 (524)
.++...+...+ ..+++..|.++++..+..++||||++++.++.++..|...|+.+..+||+++.++|..+++.|++|+.
T Consensus 5 ~~i~q~yi~v~-~~~K~~~L~~ll~~~~~~k~iVF~~~~~~~~~l~~~L~~~g~~~~~~h~~~~~~~r~~~~~~f~~~~~ 83 (171)
T d1s2ma2 5 KGITQYYAFVE-ERQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQERNKVFHEFRQGKV 83 (171)
T ss_dssp TTEEEEEEECC-GGGHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHTCCEEEECTTSCHHHHHHHHHHHHTTSS
T ss_pred cceEEEEEEcC-HHHHHHHHHHHHHhCCCCceEEEEeeeehhhHhHHhhhcccccccccccccchhhhhhhhhhcccCcc
Confidence 34443333333 25799999999999988999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEcccccccccCCCccEEEEeCCCCCHHHHHHHHhhcCCCCCCceEEEEeccccHHHHHHHHHhccCC
Q 009843 310 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSK 380 (524)
Q Consensus 310 ~VlVaT~a~~~GiD~p~v~~VI~~~~p~s~~~y~Q~~GRagR~G~~~~~i~~~~~~d~~~~~~l~~~~~~~ 380 (524)
++||||+++++|+|+|++++|||||+|++++.|+||+||+||.|+.|.|++|+++.|...+..+.+....+
T Consensus 84 ~ilv~Td~~~~Gid~~~v~~VI~~d~p~~~~~y~qr~GR~gR~g~~g~~i~~v~~~e~~~~~~i~~~l~~~ 154 (171)
T d1s2ma2 84 RTLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLINWNDRFNLYKIEQELGTE 154 (171)
T ss_dssp SEEEESSCSSSSCCCTTEEEEEESSCCSSHHHHHHHHCBSSCTTCCEEEEEEECGGGHHHHHHHHHHHTCC
T ss_pred ccccchhHhhhccccceeEEEEecCCcchHHHHHHHhhhcccCCCccEEEEEeCHHHHHHHHHHHHHHCCC
Confidence 99999999999999999999999999999999999999999999999999999999998888887664443
No 8
>d2rb4a1 c.37.1.19 (A:307-474) ATP-dependent RNA helicase DDX25 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.95 E-value=1.1e-27 Score=215.07 Aligned_cols=150 Identities=21% Similarity=0.336 Sum_probs=133.1
Q ss_pred CcceEEEEeeCchhhHHHHHHHHHHhcCCccEEEEeCccccHHHHHHHHHhCCCceEEEcCCCCHHHHHHHHHHHhcCCC
Q 009843 230 PNLFYEVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 309 (524)
Q Consensus 230 ~~l~~~v~~~~~~~~~~~~l~~~l~~~~~~~~IIf~~s~~~~e~l~~~L~~~g~~~~~~h~~l~~~~R~~~~~~f~~g~~ 309 (524)
.|+.+.+...+...+++..|.++++....+++||||++++.++.++..|.+.|+++..+||+++.++|..++++|++|+.
T Consensus 4 ~~ikq~y~~~~~~~~K~~~L~~ll~~~~~~~~lIF~~~~~~~~~l~~~l~~~~~~~~~~hg~~~~~~R~~~~~~F~~g~~ 83 (168)
T d2rb4a1 4 NNIRQYYVLCEHRKDKYQALCNIYGSITIGQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDGKE 83 (168)
T ss_dssp CCEEEEEEECSSHHHHHHHHHHHHTTSCCSEEEEECSCHHHHHHHHHHHHTTTCCEEEECSSCCHHHHHHHHHHHHTTSC
T ss_pred cccEEEEEEeCCHHHHHHHHHHHHHhCCCCcEEEEcCHHHHHHHHHHHHHhcCCcceecccchhhHHHHHHhhhhcCCce
Confidence 45655555555567899999999998888899999999999999999999999999999999999999999999999999
Q ss_pred cEEEEcccccccccCCCccEEEEeCCCC------CHHHHHHHHhhcCCCCCCceEEEEeccccHHHHHHHHHhccC
Q 009843 310 QVVVATVAFGMGIDRKDVRLVCHFNIPK------SMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQS 379 (524)
Q Consensus 310 ~VlVaT~a~~~GiD~p~v~~VI~~~~p~------s~~~y~Q~~GRagR~G~~~~~i~~~~~~d~~~~~~l~~~~~~ 379 (524)
++||||+++++|+|+|++++|||||+|. +.++|+||+||+||.|++|.|+.|+++.|...+..+.+....
T Consensus 84 ~ilv~Td~~~~Gid~~~v~~Vi~yd~P~~~~~~~~~~~yihR~GR~gR~g~~g~~i~~~~~~d~~~l~~i~~~~~~ 159 (168)
T d2rb4a1 84 KVLITTNVCARGIDVKQVTIVVNFDLPVKQGEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDELPSLMKIQDHFNS 159 (168)
T ss_dssp SEEEECCSCCTTTCCTTEEEEEESSCCC--CCSCCHHHHHHHHCBC----CCEEEEEEECGGGHHHHHHHHHHHTC
T ss_pred eeeechhhhhhhhccccccEEEeecCCCcccccCCHHHHHHHhhhcccCCCceEEEEEEcHHHHHHHHHHHHHHCC
Confidence 9999999999999999999999999998 578999999999999999999999999999888877765443
No 9
>d1veca_ c.37.1.19 (A:) DEAD box RNA helicase rck/p54 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.95 E-value=3.5e-27 Score=219.34 Aligned_cols=189 Identities=23% Similarity=0.250 Sum_probs=142.7
Q ss_pred ccCCCCChhHHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCEEEEcCCCChHHHHHHHHHhcC------CCeEEEeCcHH
Q 009843 15 QKNKPLHEKEALVKLLRWHFGHAQFRDKQLDAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAK------PGIVLVVSPLI 88 (524)
Q Consensus 15 ~~~~~~~~~~~~~~~l~~~fg~~~~r~~Q~~~i~~~l~g~d~lv~apTGsGKTl~~~lp~l~~------~~~~lvl~P~~ 88 (524)
..|+++++++++.+.|.+ .||..|+|.|.++|+.+++|+|+++.||||+|||++|++|++.+ +..++|++|++
T Consensus 3 ~~F~~l~L~~~l~~~l~~-~g~~~pt~iQ~~aip~il~g~dvl~~a~TGsGKTlayllP~l~~~~~~~~~~~~lil~pt~ 81 (206)
T d1veca_ 3 NEFEDYCLKRELLMGIFE-MGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTR 81 (206)
T ss_dssp SSGGGSCCCHHHHHHHHT-TTCCSCCHHHHHHHHHHHTTCCEEEECCSSSTTHHHHHHHHHHHCCTTSCSCCEEEECSCH
T ss_pred CChhccCcCHHHHHHHHH-CCCCCCCHHHHHHHHHHHcCCCEEeeccCccccccccccchhhcccccccCcceEEEeecc
Confidence 567889999999999998 79999999999999999999999999999999999999999863 56899999999
Q ss_pred HHHHHHHHHHHHc-----CCceeEeccCCCHHHHHHHHHHhhcCCCcccEEEeCcccccChhhHHHHHh--hhccCCccE
Q 009843 89 ALMENQVIGLKEK-----GIAGEFLSSTQTMQVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKK--IHSRGLLNL 161 (524)
Q Consensus 89 ~L~~q~~~~l~~~-----gi~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ll~~tpe~v~t~~~~~~l~~--~~~~~~l~~ 161 (524)
+|+.|..+.+... ++......+......... .+.. ..+++++||+ .+..+.. ......+++
T Consensus 82 el~~q~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---~l~~---~~~ivv~TPg------rl~~~~~~~~~~~~~l~~ 149 (206)
T d1veca_ 82 ELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIM---RLDD---TVHVVIATPG------RILDLIKKGVAKVDHVQM 149 (206)
T ss_dssp HHHHHHHHHHHHHTTTSSSCCEEEECSSSCHHHHHH---HTTS---CCSEEEECHH------HHHHHHHTTCSCCTTCCE
T ss_pred hhhHHHHHHHHHHhhcccCcccccccCCccHHHHHH---HHHh---ccCeEEeCCc------cccccccchhccccccce
Confidence 9999998888764 233444444444333221 1222 2566655555 3333332 334567999
Q ss_pred EEEeccccccccCCCCHHHHHHHHHHHHhCC-CCCEEEEeccCChhHHHHHHHHhCCCCCeEE
Q 009843 162 VAIDEAHCISSWGHDFRPSYRKLSSLRNYLP-DVPILALTATAAPKVQKDVMESLCLQNPLVL 223 (524)
Q Consensus 162 iViDEaH~i~~~g~~fr~~~~~l~~l~~~~~-~~~ii~lSAT~~~~~~~~i~~~l~l~~~~~~ 223 (524)
+|+||||.+.++| |.+. +..+...+| ++|++++|||.++++.+..... +.+|..+
T Consensus 150 lVlDEaD~ll~~~--f~~~---i~~I~~~~~~~~Q~~l~SAT~~~~v~~l~~~~--l~~P~~I 205 (206)
T d1veca_ 150 IVLDEADKLLSQD--FVQI---MEDIILTLPKNRQILLYSATFPLSVQKFMNSH--LEKPYEI 205 (206)
T ss_dssp EEEETHHHHTSTT--THHH---HHHHHHHSCTTCEEEEEESCCCHHHHHHHHHH--CSSCEEE
T ss_pred EEEeccccccccc--hHHH---HHHHHHhCCCCCEEEEEEecCCHHHHHHHHHH--CCCCEEE
Confidence 9999999999987 6654 555566665 7889999999999887644333 5677654
No 10
>d2j0sa1 c.37.1.19 (A:22-243) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.95 E-value=1e-27 Score=224.94 Aligned_cols=193 Identities=19% Similarity=0.311 Sum_probs=147.4
Q ss_pred ccccccCCCCChhHHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCEEEEcCCCChHHHHHHHHHhcC------CCeEEEe
Q 009843 11 TSQTQKNKPLHEKEALVKLLRWHFGHAQFRDKQLDAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAK------PGIVLVV 84 (524)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~~~fg~~~~r~~Q~~~i~~~l~g~d~lv~apTGsGKTl~~~lp~l~~------~~~~lvl 84 (524)
......|+++++++.+.+.|++ .||..|+|.|.++|+.+++|+|+++.||||+|||++|++|++.. ..+++|+
T Consensus 13 ~~~~~sF~~l~L~~~l~~~L~~-~g~~~pt~IQ~~aIp~il~g~dvi~~a~TGSGKTlayllPil~~l~~~~~~~~~lil 91 (222)
T d2j0sa1 13 VDVTPTFDTMGLREDLLRGIYA-YGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALIL 91 (222)
T ss_dssp CCCCCSGGGGCCCHHHHHHHHH-HTCCSCCHHHHHHHHHHHTTCCEEEECCTTSSHHHHHHHHHHHTCCTTSCSCCEEEE
T ss_pred CCCCCCHHHCCCCHHHHHHHHH-CCCCCCCHHHHHHHHHHHCCCCeEEEcCcchhhhhhhcccccccccccccCceeEEe
Confidence 4455678889999999999998 79999999999999999999999999999999999999999864 5679999
Q ss_pred CcHHHHHHHHHHHHHHc----CCceeEeccCCCHHHHHHHHHHhhcCCCcccEEEeCcccccChhhHHHHH--hhhccCC
Q 009843 85 SPLIALMENQVIGLKEK----GIAGEFLSSTQTMQVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLK--KIHSRGL 158 (524)
Q Consensus 85 ~P~~~L~~q~~~~l~~~----gi~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ll~~tpe~v~t~~~~~~l~--~~~~~~~ 158 (524)
+|+++|+.|..+.++++ ++.+....+.......... +..+ .+++++|| +++..+. .......
T Consensus 92 ~PtreLa~Qi~~~~~~l~~~~~i~~~~~~g~~~~~~~~~~---l~~~---~~Ilv~TP------grl~~~~~~~~~~~~~ 159 (222)
T d2j0sa1 92 APTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRK---LDYG---QHVVAGTP------GRVFDMIRRRSLRTRA 159 (222)
T ss_dssp CSSHHHHHHHHHHHHHHTTTTTCCEEEECTTSCHHHHHHH---HHHC---CSEEEECH------HHHHHHHHTTSSCCTT
T ss_pred cchHHHHHHHHHHHHHHhCccceeEEEEeecccchhhHHH---hccC---CeEEeCCC------CcHHhccccccccccc
Confidence 99999999999988875 4556666666655443322 2222 45655555 4444442 2334566
Q ss_pred ccEEEEeccccccccCCCCHHHHHHHHHHHHhCC-CCCEEEEeccCChhHHHHHHHHhCCCCCeEE
Q 009843 159 LNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYLP-DVPILALTATAAPKVQKDVMESLCLQNPLVL 223 (524)
Q Consensus 159 l~~iViDEaH~i~~~g~~fr~~~~~l~~l~~~~~-~~~ii~lSAT~~~~~~~~i~~~l~l~~~~~~ 223 (524)
++++|+||||.+.+.| |. ..+..+.+.+| +.|++++|||.++++.+. ....+.+|..+
T Consensus 160 l~~lVlDEaD~ll~~~--f~---~~i~~I~~~l~~~~Q~ilfSAT~~~~v~~l--~~~~l~~Pv~I 218 (222)
T d2j0sa1 160 IKMLVLDEADEMLNKG--FK---EQIYDVYRYLPPATQVVLISATLPHEILEM--TNKFMTDPIRI 218 (222)
T ss_dssp CCEEEEETHHHHTSTT--TH---HHHHHHHTTSCTTCEEEEEESCCCHHHHTT--GGGTCSSCEEE
T ss_pred ceeeeecchhHhhhcC--cH---HHHHHHHHhCCCCCEEEEEEEeCCHHHHHH--HHHHCCCCEEE
Confidence 9999999999999987 55 44566666776 678999999999887652 22245677654
No 11
>d1t6na_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.94 E-value=1.1e-26 Score=216.13 Aligned_cols=190 Identities=15% Similarity=0.216 Sum_probs=142.7
Q ss_pred ccCCCCChhHHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCEEEEcCCCChHHHHHHHHHhcC------CCeEEEeCcHH
Q 009843 15 QKNKPLHEKEALVKLLRWHFGHAQFRDKQLDAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAK------PGIVLVVSPLI 88 (524)
Q Consensus 15 ~~~~~~~~~~~~~~~l~~~fg~~~~r~~Q~~~i~~~l~g~d~lv~apTGsGKTl~~~lp~l~~------~~~~lvl~P~~ 88 (524)
++|+++++++++.+.|++ .||.+|+|.|.++|+.+++|+|++++||||+|||++|++|++.. ..+++|++|++
T Consensus 1 s~F~dl~L~~~l~~~l~~-~g~~~pt~iQ~~aip~il~g~dvl~~A~TGsGKTla~~lp~l~~~~~~~~~~~~lil~Ptr 79 (207)
T d1t6na_ 1 SGFRDFLLKPELLRAIVD-CGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTR 79 (207)
T ss_dssp CCSTTSCCCHHHHHHHHH-TTCCCCCHHHHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHCCCCTTCCCEEEECSCH
T ss_pred CCccccCcCHHHHHHHHH-CCCCCCCHHHHHHHHHHHcCCCeEEEeccccccccccccceeeeecccCCCceEEEEeccc
Confidence 468899999999999998 69999999999999999999999999999999999999999864 45799999999
Q ss_pred HHHHHHHHHHHHcC-----CceeEeccCCCHHHHHHHHHHhhcCCCcccEEEeCcccccChhhHHHHHh--hhccCCccE
Q 009843 89 ALMENQVIGLKEKG-----IAGEFLSSTQTMQVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKK--IHSRGLLNL 161 (524)
Q Consensus 89 ~L~~q~~~~l~~~g-----i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ll~~tpe~v~t~~~~~~l~~--~~~~~~l~~ 161 (524)
+|+.|+.+.++.++ +......+......... .+.... .+++++||+ .+..+.+ ....+.+.+
T Consensus 80 eL~~qi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---~l~~~~--~~ilI~TP~------rl~~~~~~~~~~l~~l~~ 148 (207)
T d1t6na_ 80 ELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEE---VLKKNC--PHIVVGTPG------RILALARNKSLNLKHIKH 148 (207)
T ss_dssp HHHHHHHHHHHHHTTTSTTCCEEEESCCSCHHHHHH---HHHHSC--CSEEEECHH------HHHHHHHTTSSCCTTCCE
T ss_pred hhhHHHHHHHHHHHhhCCCceeEEEeccccHHHHHH---HHHhcC--CCEEEeCcc------hhhhhccCCceeccccce
Confidence 99999999888754 23444444444433322 222222 456555554 4444432 234567999
Q ss_pred EEEeccccccc-cCCCCHHHHHHHHHHHHhCC-CCCEEEEeccCChhHHHHHHHHhCCCCCeEE
Q 009843 162 VAIDEAHCISS-WGHDFRPSYRKLSSLRNYLP-DVPILALTATAAPKVQKDVMESLCLQNPLVL 223 (524)
Q Consensus 162 iViDEaH~i~~-~g~~fr~~~~~l~~l~~~~~-~~~ii~lSAT~~~~~~~~i~~~l~l~~~~~~ 223 (524)
+|+||||.+.+ +| |. ..+..+.+..| +.|++++|||.++.+.+. .+ ..+++|..+
T Consensus 149 lVlDEaD~ll~~~~--~~---~~i~~I~~~~~~~~Q~il~SAT~~~~v~~l-~~-~~l~~P~~I 205 (207)
T d1t6na_ 149 FILDECDKMLEQLD--MR---RDVQEIFRMTPHEKQVMMFSATLSKEIRPV-CR-KFMQDPMEI 205 (207)
T ss_dssp EEEESHHHHHSSHH--HH---HHHHHHHHTSCSSSEEEEEESCCCTTTHHH-HH-TTCSSCEEE
T ss_pred eehhhhhhhhhcCC--cH---HHHHHHHHhCCCCCEEEEEeeeCCHHHHHH-HH-HHCCCCEEE
Confidence 99999999876 34 44 34556666676 678999999999988763 33 346777654
No 12
>d1t5ia_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.94 E-value=1.2e-26 Score=208.36 Aligned_cols=134 Identities=17% Similarity=0.358 Sum_probs=124.9
Q ss_pred hhHHHHHHHHHHhcCCccEEEEeCccccHHHHHHHHHhCCCceEEEcCCCCHHHHHHHHHHHhcCCCcEEEEcccccccc
Q 009843 243 DDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGI 322 (524)
Q Consensus 243 ~~~~~~l~~~l~~~~~~~~IIf~~s~~~~e~l~~~L~~~g~~~~~~h~~l~~~~R~~~~~~f~~g~~~VlVaT~a~~~Gi 322 (524)
++|+..|.++++.....++||||++++.++.+++.|.+.|+.+..+||+|+.++|..++++|++|+.+|||||+++++|+
T Consensus 12 ~~K~~~L~~ll~~~~~~k~iIF~~~~~~~~~l~~~L~~~~~~~~~ihg~~~~~~r~~~l~~F~~g~~~iLv~T~~~~~Gi 91 (168)
T d1t5ia_ 12 NEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGM 91 (168)
T ss_dssp GGHHHHHHHHHHHSCCSSEEEECSSHHHHHHHHHHHHHTTCCEEEECTTSCHHHHHHHHHHHHTTSCSEEEESSCCSTTC
T ss_pred HHHHHHHHHHHHhCCCCeEEEEEeeeecchhhhhhhccccccccccccccchhhhhhhhhhhccccceeeeccccccchh
Confidence 68999999999998888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCccEEEEeCCCCCHHHHHHHHhhcCCCCCCceEEEEecccc-HHHHHHHHHh
Q 009843 323 DRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDD-RRRMEFILSK 376 (524)
Q Consensus 323 D~p~v~~VI~~~~p~s~~~y~Q~~GRagR~G~~~~~i~~~~~~d-~~~~~~l~~~ 376 (524)
|+|++++||+|++|.+++.|+||+||+||.|+.|.|++|+++.+ ...+..+.+.
T Consensus 92 d~~~~~~vi~~~~p~~~~~yiqr~GR~gR~g~~g~~i~l~~~~~~~~~~~~i~~~ 146 (168)
T d1t5ia_ 92 DIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDR 146 (168)
T ss_dssp CGGGCSEEEESSCCSSHHHHHHHHHHHTGGGCCCEEEEEECSHHHHHHHHHHHHH
T ss_pred hcccchhhhhhhcccchhhHhhhhhhcccCCCccEEEEEECchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998764 4444555443
No 13
>d1qdea_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.94 E-value=1.1e-26 Score=216.65 Aligned_cols=192 Identities=19% Similarity=0.233 Sum_probs=140.4
Q ss_pred ccccccCCCCChhHHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCEEEEcCCCChHHHHHHHHHhcC------CCeEEEe
Q 009843 11 TSQTQKNKPLHEKEALVKLLRWHFGHAQFRDKQLDAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAK------PGIVLVV 84 (524)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~l~~~fg~~~~r~~Q~~~i~~~l~g~d~lv~apTGsGKTl~~~lp~l~~------~~~~lvl 84 (524)
......|+++++++++.++|++ .||.+|+|.|.++|+.+++|+|+++++|||+|||++|++|++.+ +..++|+
T Consensus 6 ~~~~~sF~~l~l~~~l~~~L~~-~g~~~pt~iQ~~aip~il~g~dvl~~a~TGsGKT~a~~lp~i~~l~~~~~~~~~lil 84 (212)
T d1qdea_ 6 DKVVYKFDDMELDENLLRGVFG-YGFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTGTFSIAALQRIDTSVKAPQALML 84 (212)
T ss_dssp CCCCCCGGGGTCCHHHHHHHHH-HTCCSCCHHHHHHHHHHHTTCCEEEECCTTSSHHHHHHHHHHHHCCTTCCSCCEEEE
T ss_pred cccccChhhCCCCHHHHHHHHH-CCCCCCCHHHHHHHHHHHcCCCEEeecccccchhhhhHhhhHhhhhccCCCcceEEE
Confidence 3445668888999999999998 79999999999999999999999999999999999999999854 5689999
Q ss_pred CcHHHHHHHHHHHHHHcC----CceeEeccCCCHHHHHHHHHHhhcCCCcccEEEeCcccccChhhHHHHH--hhhccCC
Q 009843 85 SPLIALMENQVIGLKEKG----IAGEFLSSTQTMQVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLK--KIHSRGL 158 (524)
Q Consensus 85 ~P~~~L~~q~~~~l~~~g----i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ll~~tpe~v~t~~~~~~l~--~~~~~~~ 158 (524)
+|+++|+.|....+...+ +......+......... .+ ...+++++||+.+ ..+. .......
T Consensus 85 ~pt~el~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----~~~~IvI~TP~~l------~~~~~~~~~~l~~ 151 (212)
T d1qdea_ 85 APTRELALQIQKVVMALAFHMDIKVHACIGGTSFVEDAE---GL----RDAQIVVGTPGRV------FDNIQRRRFRTDK 151 (212)
T ss_dssp CSSHHHHHHHHHHHHHHTTTSCCCEEEECC-------------C----TTCSEEEECHHHH------HHHHHTTSSCCTT
T ss_pred cccHHHhhhhhhhhcccccccccceeeEeeccchhHHHH---Hh----cCCcEEEECCCcc------ccccccCceecCc
Confidence 999999999988887743 33333333322222111 11 1246766666543 3332 2234566
Q ss_pred ccEEEEeccccccccCCCCHHHHHHHHHHHHhCC-CCCEEEEeccCChhHHHHHHHHhCCCCCeEE
Q 009843 159 LNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYLP-DVPILALTATAAPKVQKDVMESLCLQNPLVL 223 (524)
Q Consensus 159 l~~iViDEaH~i~~~g~~fr~~~~~l~~l~~~~~-~~~ii~lSAT~~~~~~~~i~~~l~l~~~~~~ 223 (524)
++++|+||||.+.++| |...+ ..+.+.+| ++|++++|||.++.+.+..... +.+|+.+
T Consensus 152 l~~lVlDEad~lld~~--f~~~v---~~I~~~~~~~~Q~vl~SAT~~~~v~~l~~~~--l~~Pv~i 210 (212)
T d1qdea_ 152 IKMFILDEADEMLSSG--FKEQI---YQIFTLLPPTTQVVLLSATMPNDVLEVTTKF--MRNPVRI 210 (212)
T ss_dssp CCEEEEETHHHHHHTT--CHHHH---HHHHHHSCTTCEEEEEESSCCHHHHHHHHHH--CSSCEEE
T ss_pred ceEEeehhhhhhcccc--hHHHH---HHHHHhCCCCCeEEEEEeeCCHHHHHHHHHH--CCCCEEE
Confidence 9999999999999987 66544 45555665 7889999999999876633333 5677654
No 14
>d1c4oa2 c.37.1.19 (A:410-583) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}
Probab=99.93 E-value=5.3e-26 Score=202.25 Aligned_cols=121 Identities=23% Similarity=0.311 Sum_probs=105.9
Q ss_pred HHHHHHHHHHh--cCCccEEEEeCccccHHHHHHHHHhCCCceEEEcCCCCHHHHHHHHHHHhcCCCcEEEEcccccccc
Q 009843 245 AYADLCSVLKA--NGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGI 322 (524)
Q Consensus 245 ~~~~l~~~l~~--~~~~~~IIf~~s~~~~e~l~~~L~~~g~~~~~~h~~l~~~~R~~~~~~f~~g~~~VlVaT~a~~~Gi 322 (524)
.+++|.+.+++ ..+.++||||+|++.|+.+++.|.+.|+.+..+||+|+..+|..++++|++|+++|||||++++|||
T Consensus 16 qv~dll~~i~~~~~~g~r~lvfc~t~~~~~~l~~~L~~~Gi~a~~~Hg~~~~~eR~~~l~~F~~G~~~vLVaT~v~~~Gi 95 (174)
T d1c4oa2 16 QILDLMEGIRERAARGERTLVTVLTVRMAEELTSFLVEHGIRARYLHHELDAFKRQALIRDLRLGHYDCLVGINLLREGL 95 (174)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHTTCCEEEECTTCCHHHHHHHHHHHHTTSCSEEEESCCCCTTC
T ss_pred CHHHHHHHHHHHHhcCCcEEEEEcchhHHHHHHHHHHhcCCceEEEecccchHHHHHHHHHHHCCCeEEEEeeeeeeeec
Confidence 44555555543 3577899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCccEEEEeCCCC-----CHHHHHHHHhhcCCCCCCceEEEEecccc
Q 009843 323 DRKDVRLVCHFNIPK-----SMEAFYQESGRAGRDQLPSKSLLYYGMDD 366 (524)
Q Consensus 323 D~p~v~~VI~~~~p~-----s~~~y~Q~~GRagR~G~~~~~i~~~~~~d 366 (524)
|+|+|++|||++.|+ |.++|+||+||+||+|+ |.+++++....
T Consensus 96 Dip~V~~Vi~~~~~~~~~~~~~~~~iq~~GR~gR~~~-g~~~~~~~~~~ 143 (174)
T d1c4oa2 96 DIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNAR-GEVWLYADRVS 143 (174)
T ss_dssp CCTTEEEEEETTTTSCSGGGSHHHHHHHHGGGTTSTT-CEEEEECSSCC
T ss_pred cCCCCcEEEEeccccccccchhHHHHHHhhhhhhcCC-CeeEEeecCCC
Confidence 999999999999765 66899999999999886 66666655443
No 15
>d1hv8a1 c.37.1.19 (A:3-210) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=99.93 E-value=2.9e-25 Score=206.70 Aligned_cols=189 Identities=16% Similarity=0.196 Sum_probs=144.2
Q ss_pred ccCCCCChhHHHHHHHHHHcCCCCCCHHHHHHHHHHHcCC-CEEEEcCCCChHHHHHHHHHhcC-----CCeEEEeCcHH
Q 009843 15 QKNKPLHEKEALVKLLRWHFGHAQFRDKQLDAIQAVLSGR-DCFCLMPTGGGKSMCYQIPALAK-----PGIVLVVSPLI 88 (524)
Q Consensus 15 ~~~~~~~~~~~~~~~l~~~fg~~~~r~~Q~~~i~~~l~g~-d~lv~apTGsGKTl~~~lp~l~~-----~~~~lvl~P~~ 88 (524)
..|+++++++.+.+.|.+ .||.+|+|.|.++|+.+++|+ |+++.+|||+|||++|.+|++.. +.+++|++|++
T Consensus 4 msf~~l~l~~~l~~~l~~-~g~~~pt~iQ~~~ip~~l~g~~d~iv~a~TGsGKT~~~~l~~~~~~~~~~~~~~lil~pt~ 82 (208)
T d1hv8a1 4 MNFNELNLSDNILNAIRN-KGFEKPTDIQMKVIPLFLNDEYNIVAQARTGSGKTASFAIPLIELVNENNGIEAIILTPTR 82 (208)
T ss_dssp CCGGGSSCCHHHHHHHHH-HTCCSCCHHHHHHHHHHHHTCSEEEEECCSSSSHHHHHHHHHHHHSCSSSSCCEEEECSCH
T ss_pred cCHHHcCCCHHHHHHHHH-CCCCCCCHHHHHHHHHHHcCCCCeeeechhcccccceeecccccccccccCcceEEEeecc
Confidence 467778999999999998 899999999999999999885 99999999999999999998753 56899999999
Q ss_pred HHHHHHHHHHHHc----CCceeEeccCCCHHHHHHHHHHhhcCCCcccEEEeCcccccChhhHHHHHh--hhccCCccEE
Q 009843 89 ALMENQVIGLKEK----GIAGEFLSSTQTMQVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKK--IHSRGLLNLV 162 (524)
Q Consensus 89 ~L~~q~~~~l~~~----gi~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ll~~tpe~v~t~~~~~~l~~--~~~~~~l~~i 162 (524)
+|+.|+.+.++.+ +..+....+.......... +. ..+++++||+.+ ..+.+ ....+.++++
T Consensus 83 ~l~~q~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~---l~----~~~IlV~TP~~l------~~~l~~~~~~~~~l~~l 149 (208)
T d1hv8a1 83 ELAIQVADEIESLKGNKNLKIAKIYGGKAIYPQIKA---LK----NANIVVGTPGRI------LDHINRGTLNLKNVKYF 149 (208)
T ss_dssp HHHHHHHHHHHHHHCSSCCCEEEECTTSCHHHHHHH---HH----TCSEEEECHHHH------HHHHHTTCSCTTSCCEE
T ss_pred ccchhhhhhhhhhcccCCeEEEEeeCCCChHHHHHh---cC----CCCEEEEChHHH------HHHHHcCCCCcccCcEE
Confidence 9999998888874 4555666665554443322 22 156777776643 33322 2345779999
Q ss_pred EEeccccccccCCCCHHHHHHHHHHHHhCC-CCCEEEEeccCChhHHHHHHHHhCCCCCeEEe
Q 009843 163 AIDEAHCISSWGHDFRPSYRKLSSLRNYLP-DVPILALTATAAPKVQKDVMESLCLQNPLVLK 224 (524)
Q Consensus 163 ViDEaH~i~~~g~~fr~~~~~l~~l~~~~~-~~~ii~lSAT~~~~~~~~i~~~l~l~~~~~~~ 224 (524)
||||||.+.+.+ |. ..+..+.+..| +.|++++|||.++++.+...+. +.+|..++
T Consensus 150 ViDEad~l~~~~--~~---~~i~~I~~~~~~~~Q~i~~SAT~~~~v~~~~~~~--l~~~~~I~ 205 (208)
T d1hv8a1 150 ILDEADEMLNMG--FI---KDVEKILNACNKDKRILLFSATMPREILNLAKKY--MGDYSFIK 205 (208)
T ss_dssp EEETHHHHHTTT--TH---HHHHHHHHTSCSSCEEEEECSSCCHHHHHHHHHH--CCSEEEEE
T ss_pred EEEChHHhhcCC--Ch---HHHHHHHHhCCCCCeEEEEEccCCHHHHHHHHHH--CCCCeEEE
Confidence 999999998765 44 34566666665 7889999999999887644444 45776664
No 16
>d2g9na1 c.37.1.19 (A:21-238) Initiation factor 4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.93 E-value=3.6e-26 Score=214.11 Aligned_cols=193 Identities=17% Similarity=0.238 Sum_probs=140.4
Q ss_pred cccccCCCCChhHHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCEEEEcCCCChHHHHHHHHHhcC------CCeEEEeC
Q 009843 12 SQTQKNKPLHEKEALVKLLRWHFGHAQFRDKQLDAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAK------PGIVLVVS 85 (524)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~l~~~fg~~~~r~~Q~~~i~~~l~g~d~lv~apTGsGKTl~~~lp~l~~------~~~~lvl~ 85 (524)
.+-..|+++++++.+.+.|.+ .||..|++.|..+|+.++.|+|+++.||||+|||++|++|++.+ ..+++|++
T Consensus 9 e~i~sF~~l~L~~~l~~~L~~-~g~~~pt~iQ~~aip~il~g~dvl~~a~TGsGKTlayllp~l~~i~~~~~~~~alil~ 87 (218)
T d2g9na1 9 EIVDSFDDMNLSESLLRGIYA-YGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLA 87 (218)
T ss_dssp CCCCCGGGSCCCHHHHHHHHH-HTCCSCCHHHHHHHHHHHHTCCEEEECCTTSSHHHHHHHHHHHHCCTTCCSCCEEEEC
T ss_pred CccCCHHHCCCCHHHHHHHHH-CCCCCCCHHHHHHHHHHHcCCCEEEEcccchhhhhhhhhhhhheecccccCccEEEEc
Confidence 344567888999999999987 79999999999999999999999999999999999999999854 66899999
Q ss_pred cHHHHHHHHHHHHHHc----CCceeEeccCCCHHHHHHHHHHhhcCCCcccEEEeCcccccChhhHHHHH--hhhccCCc
Q 009843 86 PLIALMENQVIGLKEK----GIAGEFLSSTQTMQVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLK--KIHSRGLL 159 (524)
Q Consensus 86 P~~~L~~q~~~~l~~~----gi~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ll~~tpe~v~t~~~~~~l~--~~~~~~~l 159 (524)
|+++|+.|..+.++.+ +............... .........+++++||+ .+..+. .......+
T Consensus 88 Pt~eL~~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~IvV~TP~------rl~~~l~~~~~~~~~l 156 (218)
T d2g9na1 88 PTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAE-----VQKLQMEAPHIIVGTPG------RVFDMLNRRYLSPKYI 156 (218)
T ss_dssp SSHHHHHHHHHHHHHHHTTTTCCEEEECC--CCCST-----TTSSSSCCCSEEEECHH------HHHHHHHTTSSCSTTC
T ss_pred ccchhhhhHHHHHhhhccccceeEEeeecccchhHH-----HHHHhcCCCEEEEeCCh------hHHHHHhcCCcccccc
Confidence 9999999999988774 3333333322111110 00011112456555554 333332 23445669
Q ss_pred cEEEEeccccccccCCCCHHHHHHHHHHHHhCC-CCCEEEEeccCChhHHHHHHHHhCCCCCeEE
Q 009843 160 NLVAIDEAHCISSWGHDFRPSYRKLSSLRNYLP-DVPILALTATAAPKVQKDVMESLCLQNPLVL 223 (524)
Q Consensus 160 ~~iViDEaH~i~~~g~~fr~~~~~l~~l~~~~~-~~~ii~lSAT~~~~~~~~i~~~l~l~~~~~~ 223 (524)
.++|+||||.+.+.| |.+ .+..+.+.+| ++|++++|||.++++.+-.... +.+|..+
T Consensus 157 ~~lVlDEaD~ll~~~--f~~---~~~~Il~~~~~~~Q~il~SAT~~~~v~~~~~~~--l~~pv~i 214 (218)
T d2g9na1 157 KMFVLDEADEMLSRG--FKD---QIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKF--MRDPIRI 214 (218)
T ss_dssp CEEEEESHHHHHHTT--CHH---HHHHHHHHSCTTCEEEEEESCCCHHHHHHHHHH--CSSCEEE
T ss_pred eEEEeeecchhhcCc--hHH---HHHHHHHhCCCCCeEEEEEecCCHHHHHHHHHH--CCCCEEE
Confidence 999999999999877 664 4555566666 6889999999999887644443 4667654
No 17
>d1t5la2 c.37.1.19 (A:415-595) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=99.92 E-value=9.4e-25 Score=197.16 Aligned_cols=120 Identities=23% Similarity=0.374 Sum_probs=104.1
Q ss_pred HHHHHHHHHHh--cCCccEEEEeCccccHHHHHHHHHhCCCceEEEcCCCCHHHHHHHHHHHhcCCCcEEEEcccccccc
Q 009843 245 AYADLCSVLKA--NGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGI 322 (524)
Q Consensus 245 ~~~~l~~~l~~--~~~~~~IIf~~s~~~~e~l~~~L~~~g~~~~~~h~~l~~~~R~~~~~~f~~g~~~VlVaT~a~~~Gi 322 (524)
.+++|+..+++ ..+.++||||++++.++.++..|++.|+.+..+||+|++.+|..++++|++|+++|||||+++++||
T Consensus 16 qvd~ll~~i~~~~~~~~~~iif~~~~~~~~~~~~~l~~~g~~~~~~hg~~~~~eR~~~l~~Fr~g~~~vLVaTdv~~rGi 95 (181)
T d1t5la2 16 QIDDLIGEIRERVERNERTLVTTLTKKMAEDLTDYLKEAGIKVAYLHSEIKTLERIEIIRDLRLGKYDVLVGINLLREGL 95 (181)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHTTTCCEEEECSSCCHHHHHHHHHHHHHTSCSEEEESCCCSSSC
T ss_pred cHHHHHHHHHHHHhcCCeEEEEeehhhhhHHHHHHHHhCCcceeEecCCccHHHHHHHHHHHHCCCCCEEEehhHHHccC
Confidence 34445444443 2456899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCccEEEEeCCCC-----CHHHHHHHHhhcCCCCCCceEEEEeccc
Q 009843 323 DRKDVRLVCHFNIPK-----SMEAFYQESGRAGRDQLPSKSLLYYGMD 365 (524)
Q Consensus 323 D~p~v~~VI~~~~p~-----s~~~y~Q~~GRagR~G~~~~~i~~~~~~ 365 (524)
|+|+|++|||||+|. |.+.|+||+||+||.|. +..++++...
T Consensus 96 Dip~v~~VI~~d~p~~~~~~s~~~yi~R~GRagR~g~-~~~~~~~~~~ 142 (181)
T d1t5la2 96 DIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNAN-GHVIMYADTI 142 (181)
T ss_dssp CCTTEEEEEETTTTSCSGGGSHHHHHHHHGGGTTSTT-CEEEEECSSC
T ss_pred CCCCCCEEEEecCCcccccccHHHHHHHHHhhccccC-ceeEeecchh
Confidence 999999999999996 79999999999999986 4444444433
No 18
>d1q0ua_ c.37.1.19 (A:) Probable DEAD box RNA helicase YqfR {Bacillus stearothermophilus [TaxId: 1422]}
Probab=99.92 E-value=3.6e-25 Score=206.42 Aligned_cols=189 Identities=17% Similarity=0.246 Sum_probs=138.4
Q ss_pred cCCCCChhHHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCEEEEcCCCChHHHHHHHHHhcC------CCeEEEeCcHHH
Q 009843 16 KNKPLHEKEALVKLLRWHFGHAQFRDKQLDAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAK------PGIVLVVSPLIA 89 (524)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~fg~~~~r~~Q~~~i~~~l~g~d~lv~apTGsGKTl~~~lp~l~~------~~~~lvl~P~~~ 89 (524)
.|+++++++.+.+.|++ +||.+|+|.|.++|+.+++|+|++++||||||||++|++|++.. ....++++|+..
T Consensus 2 ~F~~l~L~~~l~~~l~~-~g~~~pt~iQ~~aip~~l~G~dvii~a~TGSGKTlayllp~l~~~~~~~~~~~~~~~~~~~~ 80 (209)
T d1q0ua_ 2 QFTRFPFQPFIIEAIKT-LRFYKPTEIQERIIPGALRGESMVGQSQTGTGKTHAYLLPIMEKIKPERAEVQAVITAPTRE 80 (209)
T ss_dssp CGGGSCCCHHHHHHHHH-TTCCSCCHHHHHHHHHHHHTCCEEEECCSSHHHHHHHHHHHHHHCCTTSCSCCEEEECSSHH
T ss_pred ccccCCcCHHHHHHHHH-CCCCCCCHHHHHHHHHHHCCCCeEeecccccccceeeeeeeccccccccccccccccccccc
Confidence 57889999999999998 89999999999999999999999999999999999999999864 567899999999
Q ss_pred HHHHHHHHHHHc--------CCceeEeccCCCHHHHHHHHHHhhcCCCcccEEEeCcccccChhhHHHHH--hhhccCCc
Q 009843 90 LMENQVIGLKEK--------GIAGEFLSSTQTMQVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLK--KIHSRGLL 159 (524)
Q Consensus 90 L~~q~~~~l~~~--------gi~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ll~~tpe~v~t~~~~~~l~--~~~~~~~l 159 (524)
+..+........ ........+..... ..........+++++||+.+ ..+. .......+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~Ilv~TP~~l------~~~~~~~~~~~~~l 148 (209)
T d1q0ua_ 81 LATQIYHETLKITKFCPKDRMIVARCLIGGTDKQ------KALEKLNVQPHIVIGTPGRI------NDFIREQALDVHTA 148 (209)
T ss_dssp HHHHHHHHHHHHHTTSCGGGCCCEEEECCCSHHH------HTTCCCSSCCSEEEECHHHH------HHHHHTTCCCGGGC
T ss_pred hhHHHHHHHHhhhccccccccccccccccchhhH------HHHHHhccCceEEEecCchh------hhhhhhhccccccc
Confidence 888877666542 12222233222211 11222233467777777644 2222 22334568
Q ss_pred cEEEEeccccccccCCCCHHHHHHHHHHHHhCC-CCCEEEEeccCChhHHHHHHHHhCCCCCeEEe
Q 009843 160 NLVAIDEAHCISSWGHDFRPSYRKLSSLRNYLP-DVPILALTATAAPKVQKDVMESLCLQNPLVLK 224 (524)
Q Consensus 160 ~~iViDEaH~i~~~g~~fr~~~~~l~~l~~~~~-~~~ii~lSAT~~~~~~~~i~~~l~l~~~~~~~ 224 (524)
+++|+||||.+.+|| |++.+ ..+...+| ++|++++|||.++++.+ +.+.+ +++|..+.
T Consensus 149 ~~lViDEad~ll~~~--f~~~v---~~I~~~~~~~~Q~il~SATl~~~v~~-l~~~~-l~~p~~i~ 207 (209)
T d1q0ua_ 149 HILVVDEADLMLDMG--FITDV---DQIAARMPKDLQMLVFSATIPEKLKP-FLKKY-MENPTFVH 207 (209)
T ss_dssp CEEEECSHHHHHHTT--CHHHH---HHHHHTSCTTCEEEEEESCCCGGGHH-HHHHH-CSSCEEEE
T ss_pred eEEEEeecccccccc--cHHHH---HHHHHHCCCCCEEEEEEccCCHHHHH-HHHHH-CCCCEEEE
Confidence 999999999999988 77655 44455664 78999999999998876 44333 56776553
No 19
>d1wrba1 c.37.1.19 (A:164-401) putative ATP-dependent RNA helicase VlgB {Flatworm (Dugesia japonica) [TaxId: 6161]}
Probab=99.91 E-value=1.7e-25 Score=212.36 Aligned_cols=194 Identities=20% Similarity=0.240 Sum_probs=144.4
Q ss_pred cccccccCCCCChhHHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCEEEEcCCCChHHHHHHHHHhcC------------
Q 009843 10 STSQTQKNKPLHEKEALVKLLRWHFGHAQFRDKQLDAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAK------------ 77 (524)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~l~~~fg~~~~r~~Q~~~i~~~l~g~d~lv~apTGsGKTl~~~lp~l~~------------ 77 (524)
.......|+++++++++.+.|++ .||..|+|.|.++|+.+++|+|++++||||+|||++|++|++.+
T Consensus 16 ~~~~~~~F~~l~l~~~l~~~L~~-~g~~~pt~iQ~~~ip~il~g~dvvi~a~TGsGKTlayllp~l~~l~~~~~~~~~~~ 94 (238)
T d1wrba1 16 ATNVIENFDELKLDPTIRNNILL-ASYQRPTPIQKNAIPAILEHRDIMACAQTGSGKTAAFLIPIINHLVCQDLNQQRYS 94 (238)
T ss_dssp CCSCCCSSGGGSCCCSTTTTTTT-TTCCSCCHHHHHHHHHHHTTCCEEEECCTTSSHHHHHHHHHHHHHHTTCC------
T ss_pred CCCccCCHHHCCCCHHHHHHHHH-CCCCCCCHHHHHHhhhhhCCCCEEEECCCCCCcceeeHHHHHHHHHhccccccccc
Confidence 34445778889999999999997 79999999999999999999999999999999999999999853
Q ss_pred ---CCeEEEeCcHHHHHHHHHHHHHHc----CCceeEeccCCCHHHHHHHHHHhhcCCCcccEEEeCcccccChhhHHHH
Q 009843 78 ---PGIVLVVSPLIALMENQVIGLKEK----GIAGEFLSSTQTMQVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKL 150 (524)
Q Consensus 78 ---~~~~lvl~P~~~L~~q~~~~l~~~----gi~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ll~~tpe~v~t~~~~~~l 150 (524)
..+++|++|+++|+.|..+.+..+ ++......+......... ... . ..+++++||+. +..+
T Consensus 95 ~~~~~~alil~pt~el~~q~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~-~--~~~ivV~TP~~------l~~~ 162 (238)
T d1wrba1 95 KTAYPKCLILAPTRELAIQILSESQKFSLNTPLRSCVVYGGADTHSQIR---EVQ-M--GCHLLVATPGR------LVDF 162 (238)
T ss_dssp CCBCCSEEEECSSHHHHHHHHHHHHHHHTTSSCCEEEECSSSCSHHHHH---HHS-S--CCSEEEECHHH------HHHH
T ss_pred CCCCceEEEeccchhhhcchheeeeecccCCCcEEEEEeccchhhHHHh---hcc-c--CCceeecCHHH------HHhH
Confidence 457999999999999999887763 455666655544433222 112 2 25666666654 3343
Q ss_pred Hh--hhccCCccEEEEeccccccccCCCCHHHHHHHHHHHHhCC-----CCCEEEEeccCChhHHHHHHHHhCCCCCeEE
Q 009843 151 KK--IHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYLP-----DVPILALTATAAPKVQKDVMESLCLQNPLVL 223 (524)
Q Consensus 151 ~~--~~~~~~l~~iViDEaH~i~~~g~~fr~~~~~l~~l~~~~~-----~~~ii~lSAT~~~~~~~~i~~~l~l~~~~~~ 223 (524)
.. ......+.++|+||||.+.+.| |.++...+ .+... +.|++++|||+++++.+.... .+.+|..+
T Consensus 163 ~~~~~~~l~~v~~lViDEaD~ll~~~--f~~~i~~I---l~~~~~~~~~~~Q~il~SAT~~~~v~~l~~~--~~~~p~~i 235 (238)
T d1wrba1 163 IEKNKISLEFCKYIVLDEADRMLDMG--FEPQIRKI---IEESNMPSGINRQTLMFSATFPKEIQKLAAD--FLYNYIFM 235 (238)
T ss_dssp HHTTSBCCTTCCEEEEETHHHHHHTT--CHHHHHHH---HHSSCCCCGGGCEEEEEESSCCHHHHHHHHH--HCSSCEEE
T ss_pred HccCceeccccceeeeehhhhhhhhc--cHHHHHHH---HHHhcCCCCCCCEEEEEeeeCCHHHHHHHHH--HCCCCEEE
Confidence 32 3335678999999999999877 66555444 43322 568999999999988664333 34677654
No 20
>d1s2ma1 c.37.1.19 (A:46-251) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.91 E-value=9.5e-25 Score=202.95 Aligned_cols=189 Identities=21% Similarity=0.273 Sum_probs=145.5
Q ss_pred cCCCCChhHHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCEEEEcCCCChHHHHHHHHHhcC------CCeEEEeCcHHH
Q 009843 16 KNKPLHEKEALVKLLRWHFGHAQFRDKQLDAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAK------PGIVLVVSPLIA 89 (524)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~fg~~~~r~~Q~~~i~~~l~g~d~lv~apTGsGKTl~~~lp~l~~------~~~~lvl~P~~~ 89 (524)
.|.++++++.+.+.|++ .||.+|+|.|.++|+.+++|+|+++.||||+|||++|++|++.. ....++++|+.+
T Consensus 2 sF~~l~L~~~l~~~L~~-~g~~~pt~iQ~~aip~il~g~dvi~~a~tGsGKTlay~lp~i~~~~~~~~~~~~~~~~~~~~ 80 (206)
T d1s2ma1 2 TFEDFYLKRELLMGIFE-AGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRE 80 (206)
T ss_dssp CGGGGCCCHHHHHHHHH-TTCCSCCHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHCCTTSCSCCEEEECSSHH
T ss_pred ChHHcCCCHHHHHHHHH-CCCCCCCHHHHHHHHHHHcCCCEEEecCCcchhhhhhccccccccccccccccceeeccchh
Confidence 46778999999999998 79999999999999999999999999999999999999999853 668999999999
Q ss_pred HHHHHHHHHHH----cCCceeEeccCCCHHHHHHHHHHhhcCCCcccEEEeCcccccChhhHHHHHh--hhccCCccEEE
Q 009843 90 LMENQVIGLKE----KGIAGEFLSSTQTMQVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKK--IHSRGLLNLVA 163 (524)
Q Consensus 90 L~~q~~~~l~~----~gi~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ll~~tpe~v~t~~~~~~l~~--~~~~~~l~~iV 163 (524)
++.+....+.. .++.+....+......... .+. ...+++++||+.+ ..+.+ ......++++|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---~l~---~~~~Ili~TP~~l------~~~l~~~~~~l~~l~~lV 148 (206)
T d1s2ma1 81 LALQTSQVVRTLGKHCGISCMVTTGGTNLRDDIL---RLN---ETVHILVGTPGRV------LDLASRKVADLSDCSLFI 148 (206)
T ss_dssp HHHHHHHHHHHHTTTTTCCEEEECSSSCHHHHHH---HTT---SCCSEEEECHHHH------HHHHHTTCSCCTTCCEEE
T ss_pred hhhhhhhhhhhcccccCeeEEeecCccchhhHHH---Hhc---ccceEEEECCccc------ccccccceeecccceEEE
Confidence 99998877766 3566766766665544332 222 2356766666543 33333 22356689999
Q ss_pred EeccccccccCCCCHHHHHHHHHHHHhCC-CCCEEEEeccCChhHHHHHHHHhCCCCCeEEe
Q 009843 164 IDEAHCISSWGHDFRPSYRKLSSLRNYLP-DVPILALTATAAPKVQKDVMESLCLQNPLVLK 224 (524)
Q Consensus 164 iDEaH~i~~~g~~fr~~~~~l~~l~~~~~-~~~ii~lSAT~~~~~~~~i~~~l~l~~~~~~~ 224 (524)
+||||.+.+.| |.+ .+..+.+.+| ++|++++|||.++++.+-.... +.+|..+.
T Consensus 149 ~DEaD~l~~~~--f~~---~v~~I~~~l~~~~Q~il~SATl~~~v~~~~~~~--l~~P~~I~ 203 (206)
T d1s2ma1 149 MDEADKMLSRD--FKT---IIEQILSFLPPTHQSLLFSATFPLTVKEFMVKH--LHKPYEIN 203 (206)
T ss_dssp EESHHHHSSHH--HHH---HHHHHHTTSCSSCEEEEEESCCCHHHHHHHHHH--CSSCEEES
T ss_pred eechhhhhhhh--hHH---HHHHHHHhCCCCCEEEEEEEeCCHHHHHHHHHH--CCCCEEEE
Confidence 99999998866 554 4556666777 6789999999999887744444 46776553
No 21
>d1jr6a_ c.37.1.14 (A:) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=99.89 E-value=4.3e-24 Score=184.04 Aligned_cols=103 Identities=30% Similarity=0.407 Sum_probs=93.0
Q ss_pred HhcCCccEEEEeCccccHHHHHHHHHhCCCceEEEcCCCCHHHHHHHHHHHhcCCCcEEEEcccccccccCCCccEEEEe
Q 009843 254 KANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHF 333 (524)
Q Consensus 254 ~~~~~~~~IIf~~s~~~~e~l~~~L~~~g~~~~~~h~~l~~~~R~~~~~~f~~g~~~VlVaT~a~~~GiD~p~v~~VI~~ 333 (524)
+...++++||||+|++.|+.+++.|++.|+.+..||++|+.+ .|++|+.+|||||++++|||| |++++|||+
T Consensus 31 ~~~~~~k~IVFc~t~~~ae~la~~L~~~G~~~~~~H~~~~~~-------~~~~~~~~vlvaTd~~~~GiD-~~v~~Vi~~ 102 (138)
T d1jr6a_ 31 EVIKGGRHLIFCHSKKKCDELAAKLVALGINAVAYYRGLDVS-------VIPTNGDVVVVATDALMTGFT-GDFDSVIDC 102 (138)
T ss_dssp HHHTTSCEEEECSCHHHHHHHHHHHHHHTCEEEEECTTCCSC-------CCTTSSCEEEEESSSSCSSSC-CCBSEEEEC
T ss_pred hhcCCCCEEEEeCcHHHHHHHHHHHhccccchhhhhccchhh-------hhhhhhcceeehhHHHHhccc-cccceEEEE
Confidence 444567899999999999999999999999999999999854 478899999999999999999 999999996
Q ss_pred C----CCCCHHHHHHHHhhcCCCCCCceEEEEecccc
Q 009843 334 N----IPKSMEAFYQESGRAGRDQLPSKSLLYYGMDD 366 (524)
Q Consensus 334 ~----~p~s~~~y~Q~~GRagR~G~~~~~i~~~~~~d 366 (524)
+ +|.+.++|+||+||+|| |++|. ++|+.+.|
T Consensus 103 ~~~~~~P~~~~~y~qr~GR~gR-g~~G~-~~~i~~~e 137 (138)
T d1jr6a_ 103 NTSDGKPQDAVSRTQRRGRTGR-GKPGI-YRFVAPGE 137 (138)
T ss_dssp SEETTEECCHHHHHHHHTTBCS-SSCEE-EEECCSSC
T ss_pred EecCCCCCCHHHHHhHhccccC-CCCcE-EEEEcCCC
Confidence 5 69999999999999999 99995 66887765
No 22
>d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.86 E-value=5.6e-22 Score=183.47 Aligned_cols=175 Identities=21% Similarity=0.245 Sum_probs=120.2
Q ss_pred hhHHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCEEEEcCCCChHHHHHHHHHhc---CCCeEEEeCcHHHHHHHHHHHH
Q 009843 22 EKEALVKLLRWHFGHAQFRDKQLDAIQAVLSGRDCFCLMPTGGGKSMCYQIPALA---KPGIVLVVSPLIALMENQVIGL 98 (524)
Q Consensus 22 ~~~~~~~~l~~~fg~~~~r~~Q~~~i~~~l~g~d~lv~apTGsGKTl~~~lp~l~---~~~~~lvl~P~~~L~~q~~~~l 98 (524)
+.+.+...|++ .|+.+|+|+|.++++.+++|+++++.||||+|||.+++++++. +.+++|+++|+++|+.|+.+++
T Consensus 10 ~~~~~~~~l~~-~g~~~l~~~Q~~ai~~l~~~~~~il~apTGsGKT~~a~l~i~~~~~~~~~vl~l~P~~~L~~q~~~~~ 88 (202)
T d2p6ra3 10 ISSYAVGILKE-EGIEELFPPQAEAVEKVFSGKNLLLAMPTAAGKTLLAEMAMVREAIKGGKSLYVVPLRALAGEKYESF 88 (202)
T ss_dssp HHHHHHHHHHC-C---CCCCCCHHHHHHHTTCSCEEEECSSHHHHHHHHHHHHHHHHHTTCCEEEEESSHHHHHHHHHHH
T ss_pred hhHHHHHHHHH-cCCCCCCHHHHHHHHHHHcCCCEEEEcCCCCchhHHHHHHHHHHhhccCcceeecccHHHHHHHHHHH
Confidence 46677888887 7999999999999999999999999999999999999887764 5889999999999999999999
Q ss_pred HHcC---CceeEeccCCCHHHHHHHHHHhhcCCCcccEEEeCcccccChhhHHHHHh--hhccCCccEEEEecccccccc
Q 009843 99 KEKG---IAGEFLSSTQTMQVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKK--IHSRGLLNLVAIDEAHCISSW 173 (524)
Q Consensus 99 ~~~g---i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ll~~tpe~v~t~~~~~~l~~--~~~~~~l~~iViDEaH~i~~~ 173 (524)
+++. .......+..... ........+++++|. .+..+.. ......+++||+||+|.+.++
T Consensus 89 ~~~~~~~~~v~~~~~~~~~~---------~~~~~~~~ii~~~~~------~~~~~~~~~~~~~~~~~~ii~DE~h~~~~~ 153 (202)
T d2p6ra3 89 KKWEKIGLRIGISTGDYESR---------DEHLGDCDIIVTTSE------KADSLIRNRASWIKAVSCLVVDEIHLLDSE 153 (202)
T ss_dssp TTTTTTTCCEEEECSSCBCC---------SSCSTTCSEEEEEHH------HHHHHHHTTCSGGGGCCEEEETTGGGGGCT
T ss_pred HHHhhccccceeeccCcccc---------cccccccceeeeccH------HHHHHHhccchhhhhhhhccccHHHHhccc
Confidence 8753 2232222221100 011112344444444 3333322 122445899999999999876
Q ss_pred CCCCHHHHHHHHHHHHhCCCCCEEEEeccCChhHHHHHHHHh
Q 009843 174 GHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESL 215 (524)
Q Consensus 174 g~~fr~~~~~l~~l~~~~~~~~ii~lSAT~~~~~~~~i~~~l 215 (524)
+++.... ..+..+....+++++++||||+++ .+++.+++
T Consensus 154 ~r~~~~~-~~l~~i~~~~~~~~~l~lSATl~n--~~~~~~~l 192 (202)
T d2p6ra3 154 KRGATLE-ILVTKMRRMNKALRVIGLSATAPN--VTEIAEWL 192 (202)
T ss_dssp TTHHHHH-HHHHHHHHHCTTCEEEEEECCCTT--HHHHHHHT
T ss_pred ccchHHH-HHHHHHHhcCCCCcEEEEcCCCCc--HHHHHHHc
Confidence 6432211 234556666778999999999865 25667776
No 23
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.86 E-value=1.3e-22 Score=192.66 Aligned_cols=175 Identities=17% Similarity=0.185 Sum_probs=118.0
Q ss_pred ChhHHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCEEEEcCCCChHHHHHHHHHhc---CCCeEEEeCcHHHHHHHHHHH
Q 009843 21 HEKEALVKLLRWHFGHAQFRDKQLDAIQAVLSGRDCFCLMPTGGGKSMCYQIPALA---KPGIVLVVSPLIALMENQVIG 97 (524)
Q Consensus 21 ~~~~~~~~~l~~~fg~~~~r~~Q~~~i~~~l~g~d~lv~apTGsGKTl~~~lp~l~---~~~~~lvl~P~~~L~~q~~~~ 97 (524)
.+.+.+.+.+++ ++.+|+++|+++++.+++|+|++++||||+|||++++++++. ++++++||+|+++|++|+.++
T Consensus 28 ~~~~~~~~~~~~--~~~~p~~~Q~~~i~~~l~g~~~~i~apTGsGKT~~~~~~~~~~~~~~~rvliv~Pt~~La~Q~~~~ 105 (237)
T d1gkub1 28 FLLKEFVEFFRK--CVGEPRAIQKMWAKRILRKESFAATAPTGVGKTSFGLAMSLFLALKGKRCYVIFPTSLLVIQAAET 105 (237)
T ss_dssp HHHHHHHHHHHT--TTCSCCHHHHHHHHHHHTTCCEECCCCBTSCSHHHHHHHHHHHHTTSCCEEEEESCHHHHHHHHHH
T ss_pred hhHHHHHHHHHh--ccCCCCHHHHHHHHHHHCCCCEEEEecCCChHHHHHHHHHHHHHHhcCeEEEEeccHHHHHHHHHH
Confidence 344555555555 566899999999999999999999999999999999988864 478999999999999999999
Q ss_pred HHHc----CCce----eEeccCCCHHHHHHHHHHhhcCCCcccEEEeCcccccChhhHHHHHhhhccCCccEEEEecccc
Q 009843 98 LKEK----GIAG----EFLSSTQTMQVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHC 169 (524)
Q Consensus 98 l~~~----gi~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~ll~~tpe~v~t~~~~~~l~~~~~~~~l~~iViDEaH~ 169 (524)
++++ ++.. ................. .....+++++||+.+. ......+.++++||||||.
T Consensus 106 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~Ilv~Tp~~l~--------~~~~~~~~~~~vVvDE~d~ 173 (237)
T d1gkub1 106 IRKYAEKAGVGTENLIGYYHGRIPKREKENFMQ----NLRNFKIVITTTQFLS--------KHYRELGHFDFIFVDDVDA 173 (237)
T ss_dssp HHHHHTTTCCSGGGSEEECCSSCCSHHHHHHHH----SGGGCSEEEEEHHHHH--------HCSTTSCCCSEEEESCHHH
T ss_pred HHHHHHHcCCceEEEEeeeecccchhhhhhhhc----cccccceeccChHHHH--------HhhhhcCCCCEEEEEChhh
Confidence 9874 3332 22233333333332222 2223567777776431 2233455699999999999
Q ss_pred ccccCCCCHHHHHHHHHHHH----------h-CCCCCEEEEeccCChhHHHHHHH
Q 009843 170 ISSWGHDFRPSYRKLSSLRN----------Y-LPDVPILALTATAAPKVQKDVME 213 (524)
Q Consensus 170 i~~~g~~fr~~~~~l~~l~~----------~-~~~~~ii~lSAT~~~~~~~~i~~ 213 (524)
+.+++... ..+..+.. . -+..+++++|||+++.....+.+
T Consensus 174 ~l~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~i~~SAT~~~~~~~~l~r 224 (237)
T d1gkub1 174 ILKASKNV----DKLLHLLGFHYDLKTKSWVGEARGCLMVSTATAKKGKKAELFR 224 (237)
T ss_dssp HHTSTHHH----HHHHHHTTEEEETTTTEEEECCSSEEEECCCCSCCCTTHHHHH
T ss_pred hhhcccch----hHHHHhcCChHHHHHHHhhCCCCCeEEEEeCCCCcccHHHHHH
Confidence 98765322 22221110 0 12456899999998765554443
No 24
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=99.82 E-value=2.5e-19 Score=164.93 Aligned_cols=152 Identities=19% Similarity=0.185 Sum_probs=108.7
Q ss_pred CCCHHHHHHHHHHHcCCCEEEEcCCCChHHHHHHHHHhc----CCCeEEEeCcHHHHHHHHHHHHHHc----CCceeEec
Q 009843 38 QFRDKQLDAIQAVLSGRDCFCLMPTGGGKSMCYQIPALA----KPGIVLVVSPLIALMENQVIGLKEK----GIAGEFLS 109 (524)
Q Consensus 38 ~~r~~Q~~~i~~~l~g~d~lv~apTGsGKTl~~~lp~l~----~~~~~lvl~P~~~L~~q~~~~l~~~----gi~~~~~~ 109 (524)
+||++|.++++.+. +++++++||||+|||+++++++.. .++++++++|+++|++|+.+.+++. +..+....
T Consensus 9 ~pr~~Q~~~~~~~~-~~n~lv~~pTGsGKT~i~~~~~~~~~~~~~~~il~i~P~~~L~~q~~~~~~~~~~~~~~~v~~~~ 87 (200)
T d1wp9a1 9 QPRIYQEVIYAKCK-ETNCLIVLPTGLGKTLIAMMIAEYRLTKYGGKVLMLAPTKPLVLQHAESFRRLFNLPPEKIVALT 87 (200)
T ss_dssp CCCHHHHHHHHHGG-GSCEEEECCTTSCHHHHHHHHHHHHHHHSCSCEEEECSSHHHHHHHHHHHHHHBCSCGGGEEEEC
T ss_pred CCCHHHHHHHHHHh-cCCeEEEeCCCCcHHHHHHHHHHHHHHhcCCcEEEEcCchHHHHHHHHHHHHhhcccccceeeee
Confidence 69999999999875 568999999999999998877653 4788999999999999999999985 34455566
Q ss_pred cCCCHHHHHHHHHHhhcCCCcccEEEeCcccccChhhHHHHH-hhhccCCccEEEEeccccccccCCCCHHHHHHHHHHH
Q 009843 110 STQTMQVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLK-KIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLR 188 (524)
Q Consensus 110 ~~~~~~~~~~~~~~l~~~~~~~~ll~~tpe~v~t~~~~~~l~-~~~~~~~l~~iViDEaH~i~~~g~~fr~~~~~l~~l~ 188 (524)
.......+...+.. ..++++||+.+.. .+. .......++++|+||||++..-. . ....+..+.
T Consensus 88 ~~~~~~~~~~~~~~-------~~i~i~t~~~~~~-----~~~~~~~~~~~~~~vIiDE~H~~~~~~---~-~~~~~~~~~ 151 (200)
T d1wp9a1 88 GEKSPEERSKAWAR-------AKVIVATPQTIEN-----DLLAGRISLEDVSLIVFDEAHRAVGNY---A-YVFIAREYK 151 (200)
T ss_dssp SCSCHHHHHHHHHH-------CSEEEECHHHHHH-----HHHTTSCCTTSCSEEEEETGGGCSTTC---H-HHHHHHHHH
T ss_pred cccchhHHHHhhhc-------ccccccccchhHH-----HHhhhhhhccccceEEEEehhhhhcch---h-HHHHHHHHH
Confidence 66666555444332 4577777765422 111 22234568999999999986521 1 112334445
Q ss_pred HhCCCCCEEEEeccCChh
Q 009843 189 NYLPDVPILALTATAAPK 206 (524)
Q Consensus 189 ~~~~~~~ii~lSAT~~~~ 206 (524)
....+.++++||||+...
T Consensus 152 ~~~~~~~~l~~SATp~~~ 169 (200)
T d1wp9a1 152 RQAKNPLVIGLTASPGST 169 (200)
T ss_dssp HHCSSCCEEEEESCSCSS
T ss_pred hcCCCCcEEEEEecCCCc
Confidence 556677899999998653
No 25
>d2p6ra4 c.37.1.19 (A:203-403) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.82 E-value=1.9e-20 Score=172.33 Aligned_cols=120 Identities=24% Similarity=0.335 Sum_probs=102.8
Q ss_pred HHHHHHHHhcCCccEEEEeCccccHHHHHHHHHhCC------------------------------CceEEEcCCCCHHH
Q 009843 247 ADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGG------------------------------ISCAAYHAGLNDKA 296 (524)
Q Consensus 247 ~~l~~~l~~~~~~~~IIf~~s~~~~e~l~~~L~~~g------------------------------~~~~~~h~~l~~~~ 296 (524)
+.+.+.+++ +.++||||+||+.|+.+|..|.+.. ..+++|||+|++++
T Consensus 31 ~l~~~~i~~--~~~~LVF~~sRk~~~~~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~GIa~hh~~l~~~~ 108 (201)
T d2p6ra4 31 ELVEECVAE--NGGVLVFESTRRGAEKTAVKLSAITAKYVENEGLEKAILEENEGEMSRKLAECVRKGAAFHHAGLLNGQ 108 (201)
T ss_dssp HHHHHHHHT--TCCEEEECSSHHHHHHHHHHHHHHHHTTCCCSSHHHHHHTTCCSHHHHHHHHHHHTTCCEECTTSCHHH
T ss_pred HHHHHHHHc--CCcEEEEeCCHHHHHHHHHHHHHHHHhhhchhHHHHHHHHhhhhhhhHHHHHHHhccHHHHHHHhhhhh
Confidence 334445554 5689999999999999988876420 13789999999999
Q ss_pred HHHHHHHHhcCCCcEEEEcccccccccCCCccEEEE-------eCCCCCHHHHHHHHhhcCCCCC--CceEEEEeccccH
Q 009843 297 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCH-------FNIPKSMEAFYQESGRAGRDQL--PSKSLLYYGMDDR 367 (524)
Q Consensus 297 R~~~~~~f~~g~~~VlVaT~a~~~GiD~p~v~~VI~-------~~~p~s~~~y~Q~~GRagR~G~--~~~~i~~~~~~d~ 367 (524)
|..+++.|++|.++|||||+++++|||+|..++||+ ++.|.+..+|+|++|||||.|. .|.+++++...+.
T Consensus 109 r~~ie~~f~~g~i~vlvaT~~l~~Gin~p~~~vvi~~~~~~d~~~~~~~~~~~~q~~GRAGR~g~~~~G~~~l~~~~~~~ 188 (201)
T d2p6ra4 109 RRVVEDAFRRGNIKVVVATPTLAAGVNLPARRVIVRSLYRFDGYSKRIKVSEYKQMAGRAGRPGMDERGEAIIIVGKRDR 188 (201)
T ss_dssp HHHHHHHHHTTSCCEEEECSTTTSSSCCCBSEEEECCSEEESSSEEECCHHHHHHHHTTBSCTTTCSCEEEEEECCGGGH
T ss_pred HHHHHHHHhCCCceEEEechHHHhhcCCCCceEEEecceeccCCcCCCCHHHHHHHhcccCCCCCCCeeEEEEEeCCCCh
Confidence 999999999999999999999999999999999996 6788999999999999999985 6788888887765
Q ss_pred H
Q 009843 368 R 368 (524)
Q Consensus 368 ~ 368 (524)
.
T Consensus 189 ~ 189 (201)
T d2p6ra4 189 E 189 (201)
T ss_dssp H
T ss_pred H
Confidence 4
No 26
>d1wp9a2 c.37.1.19 (A:201-486) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=99.81 E-value=3.9e-20 Score=180.36 Aligned_cols=118 Identities=25% Similarity=0.372 Sum_probs=103.7
Q ss_pred HHHHHhcCCccEEEEeCccccHHHHHHHHHhCCCceEEEcC--------CCCHHHHHHHHHHHhcCCCcEEEEccccccc
Q 009843 250 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHA--------GLNDKARSSVLDDWISSRKQVVVATVAFGMG 321 (524)
Q Consensus 250 ~~~l~~~~~~~~IIf~~s~~~~e~l~~~L~~~g~~~~~~h~--------~l~~~~R~~~~~~f~~g~~~VlVaT~a~~~G 321 (524)
.+++....+.++||||+++..++.+++.|.+.|+++..+|| +++..+|..+++.|++|+++|||||+++++|
T Consensus 153 ~~~~~~~~~~k~iiF~~~~~~~~~~~~~L~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~F~~g~~~vLv~T~~~~~G 232 (286)
T d1wp9a2 153 REQLQRKQNSKIIVFTNYRETAKKIVNELVKDGIKAKRFVGQASKENDRGLSQREQKLILDEFARGEFNVLVATSVGEEG 232 (286)
T ss_dssp HHHHHHCTTCCEEEECSCHHHHHHHHHHHHHTTCCEEEECCSSCC-------CCHHHHHHHHHHHTSCSEEEECGGGGGG
T ss_pred HHHHHhCCCCcEEEEeCcHHhHHHHHHHHHHcCCceEEeeccccccccchhchHHHHHHHHHHHcCCCcEEEEccceecc
Confidence 34445567789999999999999999999999999988876 5666789999999999999999999999999
Q ss_pred ccCCCccEEEEeCCCCCHHHHHHHHhhcCCCCCCceEEEEeccccHH
Q 009843 322 IDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRR 368 (524)
Q Consensus 322 iD~p~v~~VI~~~~p~s~~~y~Q~~GRagR~G~~~~~i~~~~~~d~~ 368 (524)
||+|++++||+||+|+|+..|+||+||+||.+ +|.+++|++++..+
T Consensus 233 ld~~~~~~Vi~~d~~~~~~~~~Qr~GR~gR~~-~~~~~~l~~~~~~e 278 (286)
T d1wp9a2 233 LDVPEVDLVVFYEPVPSAIRSIQRRGRTGRHM-PGRVIILMAKGTRD 278 (286)
T ss_dssp GGSTTCCEEEESSCCHHHHHHHHHHTTSCSCC-CSEEEEEEETTSHH
T ss_pred ccCCCCCEEEEeCCCCCHHHHHHHHHhCCCCC-CCEEEEEEeCCCHH
Confidence 99999999999999999999999999999975 68888888877543
No 27
>d1gm5a4 c.37.1.19 (A:550-755) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=99.77 E-value=3.8e-20 Score=169.42 Aligned_cols=126 Identities=19% Similarity=0.277 Sum_probs=98.9
Q ss_pred HHHHHHHHHh--cCCccEEEEeCccccHHH--------HHHHHHhC---CCceEEEcCCCCHHHHHHHHHHHhcCCCcEE
Q 009843 246 YADLCSVLKA--NGDTCAIVYCLERTTCDE--------LSAYLSAG---GISCAAYHAGLNDKARSSVLDDWISSRKQVV 312 (524)
Q Consensus 246 ~~~l~~~l~~--~~~~~~IIf~~s~~~~e~--------l~~~L~~~---g~~~~~~h~~l~~~~R~~~~~~f~~g~~~Vl 312 (524)
.+.+.+.+++ ..+.++.+.|+..+..+. ..+.|.+. ++.+..+||+|++++|+.++++|++|+++||
T Consensus 15 ~~~v~~~I~~el~~g~QvyvVcP~Ieese~~~~~~~~e~~~~l~~~~~p~~~v~~lHG~m~~~eke~~m~~F~~g~~~iL 94 (206)
T d1gm5a4 15 VNEVYEFVRQEVMRGGQAFIVYPLIEESDKLNVKSAVEMYEYLSKEVFPEFKLGLMHGRLSQEEKDRVMLEFAEGRYDIL 94 (206)
T ss_dssp HHHHHHHHHHHTTTSCCBCCBCCCC--------CHHHHHHHSGGGSCC---CBCCCCSSSCCSCSHHHHHHHTTTSSSBC
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeeecccccccchhhHHHHHHHHHhcCCCCeEEEEeecccHHHHHHHHHHHHCCCEEEE
Confidence 4445555544 245677888887655443 33444332 5678899999999999999999999999999
Q ss_pred EEcccccccccCCCccEEEEeCCCC-CHHHHHHHHhhcCCCCCCceEEEEeccccHHHHH
Q 009843 313 VATVAFGMGIDRKDVRLVCHFNIPK-SMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRME 371 (524)
Q Consensus 313 VaT~a~~~GiD~p~v~~VI~~~~p~-s~~~y~Q~~GRagR~G~~~~~i~~~~~~d~~~~~ 371 (524)
|||+++++|||+|++++||+++.|. .++.|+|+.||+||.|..|.|++++++.+....+
T Consensus 95 VaTtViE~GIDip~a~~iii~~a~~fglsqlhQlrGRvGR~~~~~~~~l~~~~~~~~~~~ 154 (206)
T d1gm5a4 95 VSTTVIEVGIDVPRANVMVIENPERFGLAQLHQLRGRVGRGGQEAYCFLVVGDVGEEAME 154 (206)
T ss_dssp CCSSCCCSCSCCTTCCEEEBCSCSSSCTTHHHHHHHTSCCSSTTCEEECCCCSCCHHHHH
T ss_pred EEehhhhccccccCCcEEEEEccCCccHHHHHhhhhheeeccccceeEeeeccccccchh
Confidence 9999999999999999999999997 7999999999999999999999999876544333
No 28
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=99.75 E-value=2.5e-17 Score=153.23 Aligned_cols=171 Identities=24% Similarity=0.263 Sum_probs=138.1
Q ss_pred CCCChhHHHHHHHHHHcCCCCCCHHHHHHHHHHHc----C--CCEEEEcCCCChHHHHHHHHH---hcCCCeEEEeCcHH
Q 009843 18 KPLHEKEALVKLLRWHFGHAQFRDKQLDAIQAVLS----G--RDCFCLMPTGGGKSMCYQIPA---LAKPGIVLVVSPLI 88 (524)
Q Consensus 18 ~~~~~~~~~~~~l~~~fg~~~~r~~Q~~~i~~~l~----g--~d~lv~apTGsGKTl~~~lp~---l~~~~~~lvl~P~~ 88 (524)
..+...++..+.+...|.| .+++-|.+++..+.+ + .+.+++|.||||||.+|+..+ +..+..+++++|+.
T Consensus 36 ~~~~~~~~~~~~~~~~lP~-~lt~~Q~~~~~~i~~~~~~~~~~~~LL~GdvGsGKT~V~~~a~~~~~~~g~qv~~l~Pt~ 114 (233)
T d2eyqa3 36 FAFKHDREQYQLFCDSFPF-ETTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTT 114 (233)
T ss_dssp CCCCCCHHHHHHHHHTCCS-CCCHHHHHHHHHHHHHHHSSSCCEEEEECCCCTTTHHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CCCCCCHHHHHhhhhcccc-ccchhHHHHHHHHHHHHhccCccCeEEEcCCCCCcHHHHHHHHHHHHHcCCceEEEccHH
Confidence 3456667777777777887 699999999988753 2 368999999999999998655 45689999999999
Q ss_pred HHHHHHHHHHHH----cCCceeEeccCCCHHHHHHHHHHhhcCCCcccEEEeCcccccChhhHHHHHhhhccCCccEEEE
Q 009843 89 ALMENQVIGLKE----KGIAGEFLSSTQTMQVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAI 164 (524)
Q Consensus 89 ~L~~q~~~~l~~----~gi~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ll~~tpe~v~t~~~~~~l~~~~~~~~l~~iVi 164 (524)
.|+.|..+.+++ +++....+++..+..++..++..+..+. .+++++|.-.+. ......++++|||
T Consensus 115 ~La~Q~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~g~--~~iviGths~l~---------~~~~f~~LgLiIi 183 (233)
T d2eyqa3 115 LLAQQHYDNFRDRFANWPVRIEMISRFRSAKEQTQILAEVAEGK--IDILIGTHKLLQ---------SDVKFKDLGLLIV 183 (233)
T ss_dssp HHHHHHHHHHHHHSTTTTCCEEEESTTSCHHHHHHHHHHHHTTC--CSEEEECTHHHH---------SCCCCSSEEEEEE
T ss_pred HhHHHHHHHHHHHHhhCCCEEEeccCcccchhHHHHHHHHhCCC--CCEEEeehhhhc---------cCCccccccceee
Confidence 999999999986 5788999999999999999999999997 677777765442 2233456999999
Q ss_pred eccccccccCCCCHHHHHHHHHHHHhCCCCCEEEEeccCChhHHH
Q 009843 165 DEAHCISSWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQK 209 (524)
Q Consensus 165 DEaH~i~~~g~~fr~~~~~l~~l~~~~~~~~ii~lSAT~~~~~~~ 209 (524)
||-|..+ |.+-..++...++++++.+||||.|+...
T Consensus 184 DEeH~fg---------~kQ~~~l~~~~~~~~~l~~SATPiprtl~ 219 (233)
T d2eyqa3 184 DEEHRFG---------VRHKERIKAMRANVDILTLTATPIPRTLN 219 (233)
T ss_dssp ESGGGSC---------HHHHHHHHHHHTTSEEEEEESSCCCHHHH
T ss_pred echhhhh---------hHHHHHHHhhCCCCCEEEEecchhHHHHH
Confidence 9999854 34445667777789999999999998755
No 29
>d1a1va2 c.37.1.14 (A:326-624) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=99.75 E-value=1.7e-19 Score=170.74 Aligned_cols=106 Identities=22% Similarity=0.285 Sum_probs=93.0
Q ss_pred CCccEEEEeCccccHHHHHHHHHhCCCceEEEcCCCCHHHH----------HHHHHHHhcCCCcEEEEcccccc---ccc
Q 009843 257 GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR----------SSVLDDWISSRKQVVVATVAFGM---GID 323 (524)
Q Consensus 257 ~~~~~IIf~~s~~~~e~l~~~L~~~g~~~~~~h~~l~~~~R----------~~~~~~f~~g~~~VlVaT~a~~~---GiD 323 (524)
.++++||||+|++.|+++++.|++.|+++..+|++++.+.| ..+++.|.+|+.+++|+|+++.+ |+|
T Consensus 35 kggk~LVFcnSR~~aE~La~~L~~~Gi~a~~~Hgglsq~~R~~~gd~~i~~~~aLe~f~~G~~dvVVaT~~~a~g~~giD 114 (299)
T d1a1va2 35 KGGRHLIFCHSKKKCDELAAKLVALGINAVAYYRGLDVSVIPTSGDVVVVATDALMTGFTGDFDSVIDCNTCVTQTVDFS 114 (299)
T ss_dssp HSSEEEEECSSHHHHHHHHHHHHHTTCCEEEECTTSCGGGSCSSSSEEEEECTTC---CCCCBSEEEECCEEEEEEEECC
T ss_pred cCCCEEEECCcHHHHHHHHHHHHHCCCCEEEEeCCchHHHHHhccchHHHHHHHHHHHhcCCCcEEEEEeehhccCCCCC
Confidence 35689999999999999999999999999999999998876 45788899999999999999888 667
Q ss_pred CCCccEEEEeCCCCCHHHHHHHHhhcCCCCCCceEEEEec
Q 009843 324 RKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYG 363 (524)
Q Consensus 324 ~p~v~~VI~~~~p~s~~~y~Q~~GRagR~G~~~~~i~~~~ 363 (524)
++.+.+||++++|.|.++|+||+||+|| |++|...+++.
T Consensus 115 id~V~~VI~~d~P~SvesyIQRiGRTGR-Gr~G~~~~l~~ 153 (299)
T d1a1va2 115 LDPTFTIETTTLPQDAVSRTQRRGRTGR-GKPGIYRFVAP 153 (299)
T ss_dssp CSSSCEEEEEEEECBHHHHHHHHTTBCS-SSCEEEEESCS
T ss_pred CCcceEEEeCCCCCCHHHHHhhccccCC-CCCceEEEEec
Confidence 7778899999999999999999999999 99998765554
No 30
>d1gkub2 c.37.1.16 (B:251-498) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.75 E-value=3.6e-21 Score=183.75 Aligned_cols=122 Identities=18% Similarity=0.305 Sum_probs=105.3
Q ss_pred hhHHHHHHHHHHhcCCccEEEEeCccccHHHHHHHHHhCCCceEEEcCCCCHHHHHHHHHHHhcCCCcEEEEc----ccc
Q 009843 243 DDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQVVVAT----VAF 318 (524)
Q Consensus 243 ~~~~~~l~~~l~~~~~~~~IIf~~s~~~~e~l~~~L~~~g~~~~~~h~~l~~~~R~~~~~~f~~g~~~VlVaT----~a~ 318 (524)
+++++.|.++++..+ .++||||+|++.++.+++.|++. +||+++..+|.+++++|++|+++||||| +.+
T Consensus 11 ~~~~~~l~~~l~~~~-~~~iif~~~~~~~~~l~~~l~~~------~hg~~~~~~R~~~~~~f~~g~~~vLVaT~a~~~v~ 83 (248)
T d1gkub2 11 DESISTLSSILEKLG-TGGIIYARTGEEAEEIYESLKNK------FRIGIVTATKKGDYEKFVEGEIDHLIGTAHYYGTL 83 (248)
T ss_dssp CCCTTTTHHHHTTSC-SCEEEEESSHHHHHHHHHTTTTS------SCEEECTTSSSHHHHHHHHTSCSEEEEECC-----
T ss_pred chHHHHHHHHHHHhC-CCEEEEECCHHHHHHHHHHHHHh------ccCCCCHHHHHHHHHHHHhCCCeEEEEeccccchh
Confidence 456777888887654 57999999999999999999763 7999999999999999999999999999 557
Q ss_pred cccccCCC-ccEEEEeCCCCCHHHHHHHHhhcCCCCCCceEEEEeccccHHHHHHHHH
Q 009843 319 GMGIDRKD-VRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFILS 375 (524)
Q Consensus 319 ~~GiD~p~-v~~VI~~~~p~s~~~y~Q~~GRagR~G~~~~~i~~~~~~d~~~~~~l~~ 375 (524)
++|||+|+ |++|||||+|+ |.||+||+||+|+.+.+++++...+...+..+..
T Consensus 84 ~rGlDip~~v~~VI~~d~P~----~~~r~gR~~R~g~~~~~~~~~~~~~~~~~~~l~~ 137 (248)
T d1gkub2 84 VRGLDLPERIRFAVFVGCPS----FRVTIEDIDSLSPQMVKLLAYLYRNVDEIERLLP 137 (248)
T ss_dssp -CCSCCTTTCCEEEEESCCE----EEEECSCGGGSCHHHHHHHHTTTSCHHHHHTTCT
T ss_pred hhccCccccccEEEEeCCCc----chhhhhhhhccCcceEeeeeccHhhHHHHHHHHH
Confidence 99999996 99999999995 8999999999999999999999888877665543
No 31
>d2fwra1 c.37.1.19 (A:257-456) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.73 E-value=7.9e-19 Score=161.70 Aligned_cols=108 Identities=17% Similarity=0.222 Sum_probs=100.0
Q ss_pred hHHHHHHHHHHhcCCccEEEEeCccccHHHHHHHHHhCCCceEEEcCCCCHHHHHHHHHHHhcCCCcEEEEccccccccc
Q 009843 244 DAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGID 323 (524)
Q Consensus 244 ~~~~~l~~~l~~~~~~~~IIf~~s~~~~e~l~~~L~~~g~~~~~~h~~l~~~~R~~~~~~f~~g~~~VlVaT~a~~~GiD 323 (524)
.|++.|.++++.+.+.++||||++...++.+++.| .+..+||+++.++|+.+++.|++|+++|||+|+++++|||
T Consensus 79 ~K~~~l~~ll~~~~~~k~lvf~~~~~~~~~l~~~l-----~~~~i~g~~~~~~R~~~l~~F~~~~~~vLv~~~~~~~Gid 153 (200)
T d2fwra1 79 NKIRKLREILERHRKDKIIIFTRHNELVYRISKVF-----LIPAITHRTSREEREEILEGFRTGRFRAIVSSQVLDEGID 153 (200)
T ss_dssp HHHHHHHHHHHHTSSSCBCCBCSCHHHHHHHHHHT-----TCCBCCSSSCSHHHHTHHHHHHHSSCSBCBCSSCCCSSSC
T ss_pred HHHHHHHHHHHhCCCCcEEEEeCcHHHHHHHHhhc-----CcceeeCCCCHHHHHHHHHHhhcCCeeeeeecchhhcccC
Confidence 57788899999888889999999999999998876 3455899999999999999999999999999999999999
Q ss_pred CCCccEEEEeCCCCCHHHHHHHHhhcCCCCCCc
Q 009843 324 RKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 356 (524)
Q Consensus 324 ~p~v~~VI~~~~p~s~~~y~Q~~GRagR~G~~~ 356 (524)
+|.+++||+++.|+|+..|+|++||++|.|+..
T Consensus 154 l~~~~~vi~~~~~~s~~~~~Q~iGR~~R~~~~k 186 (200)
T d2fwra1 154 VPDANVGVIMSGSGSAREYIQRLGRILRPSKGK 186 (200)
T ss_dssp SCCBSEEEEECCSSCCHHHHHHHHHSBCCCTTT
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhcCCCCCCC
Confidence 999999999999999999999999999998754
No 32
>d2eyqa5 c.37.1.19 (A:779-989) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=99.72 E-value=4.7e-17 Score=147.28 Aligned_cols=136 Identities=16% Similarity=0.110 Sum_probs=112.9
Q ss_pred CCCCcceEEEEeeCchhhHHHHHHHHHHhcCCccEEEEeCccccHHHHHHHHHhC--CCceEEEcCCCCHHHHHHHHHHH
Q 009843 227 FNRPNLFYEVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAG--GISCAAYHAGLNDKARSSVLDDW 304 (524)
Q Consensus 227 ~~~~~l~~~v~~~~~~~~~~~~l~~~l~~~~~~~~IIf~~s~~~~e~l~~~L~~~--g~~~~~~h~~l~~~~R~~~~~~f 304 (524)
..|..+.-.+...+. ...++.+.+.+ ..++++.+.|+..+..+.+++.|++. +.++..+||.|++++++.++.+|
T Consensus 3 ~gR~pI~T~v~~~~~-~~i~~~I~~El--~rGgQvy~V~p~I~~~e~~~~~l~~~~p~~~i~~lHGkm~~~eke~im~~F 79 (211)
T d2eyqa5 3 ARRLAVKTFVREYDS-MVVREAILREI--LRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMRERELERVMNDF 79 (211)
T ss_dssp CBCBCEEEEEEECCH-HHHHHHHHHHH--TTTCEEEEECCCSSCHHHHHHHHHHHCTTSCEEECCSSCCHHHHHHHHHHH
T ss_pred ccCcCeEEEEeCCCH-HHHHHHHHHHH--HcCCeEEEEEcCccchhhHHHHHHHhCCceEEEEEEeccCHHHHHHHHHHH
Confidence 345555544443321 22333343333 35678999999999999999999875 77899999999999999999999
Q ss_pred hcCCCcEEEEcccccccccCCCccEEEEeCCCC-CHHHHHHHHhhcCCCCCCceEEEEeccc
Q 009843 305 ISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPK-SMEAFYQESGRAGRDQLPSKSLLYYGMD 365 (524)
Q Consensus 305 ~~g~~~VlVaT~a~~~GiD~p~v~~VI~~~~p~-s~~~y~Q~~GRagR~G~~~~~i~~~~~~ 365 (524)
.+|+++|||||.+++.|||+|+++++|..+... -+.+++|..||+||.+..|.|++++...
T Consensus 80 ~~g~~~ILv~TtvIEvGiDvpnA~~iiI~~a~rfGLaQLhQLRGRVGR~~~~s~c~l~~~~~ 141 (211)
T d2eyqa5 80 HHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAWLLTPHP 141 (211)
T ss_dssp HTTSCCEEEESSTTGGGSCCTTEEEEEETTTTSSCHHHHHHHHTTCCBTTBCEEEEEEECCG
T ss_pred HcCCcceEEEehhhhhccCCCCCcEEEEecchhccccccccccceeeecCccceEEEEecCC
Confidence 999999999999999999999999999888875 8999999999999999999999999654
No 33
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=99.72 E-value=6.1e-17 Score=153.40 Aligned_cols=169 Identities=21% Similarity=0.155 Sum_probs=129.7
Q ss_pred CChhHHHHHHHHHHcCCCCCCHHHHHHHHHHHc----C--CCEEEEcCCCChHHHHHHHHHh---cCCCeEEEeCcHHHH
Q 009843 20 LHEKEALVKLLRWHFGHAQFRDKQLDAIQAVLS----G--RDCFCLMPTGGGKSMCYQIPAL---AKPGIVLVVSPLIAL 90 (524)
Q Consensus 20 ~~~~~~~~~~l~~~fg~~~~r~~Q~~~i~~~l~----g--~d~lv~apTGsGKTl~~~lp~l---~~~~~~lvl~P~~~L 90 (524)
+....++.+.+...|.| ++++-|.+|+..+.. + .+.+++|.||||||.+|+..++ ..+..+++++||..|
T Consensus 66 ~~~~~~l~~~f~~~LPF-eLT~~Q~~ai~ei~~d~~~~~~m~rLL~GdvGSGKT~Va~~a~~~~~~~g~q~~~m~Pt~~L 144 (264)
T d1gm5a3 66 KKIEGKLAEEFIKSLPF-KLTNAQKRAHQEIRNDMISEKPMNRLLQGDVGSGKTVVAQLAILDNYEAGFQTAFMVPTSIL 144 (264)
T ss_dssp CCCCTHHHHHHHHHSSS-CCCHHHHHHHHHHHHHHHSSSCCCCEEECCSSSSHHHHHHHHHHHHHHHTSCEEEECSCHHH
T ss_pred cCCChHHHHHHHhhccc-cCCchHHHHHHHHHHHhhccCcceeeeeccccccccHHHHHHHHHHHhcccceeEEeehHhh
Confidence 33344555556666888 699999999988763 2 4679999999999999986654 458899999999999
Q ss_pred HHHHHHHHHH----cCCceeEeccCCCHHHHHHHHHHhhcCCCcccEEEeCcccccChhhHHHHHhhhccCCccEEEEec
Q 009843 91 MENQVIGLKE----KGIAGEFLSSTQTMQVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDE 166 (524)
Q Consensus 91 ~~q~~~~l~~----~gi~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ll~~tpe~v~t~~~~~~l~~~~~~~~l~~iViDE 166 (524)
+.|..+.+++ +|+....+++.....++..++..+.+|. .+++++|+-.+ .......+++++||||
T Consensus 145 a~Qh~~~~~~~f~~~~~~v~~l~~~~~~~~r~~~~~~~~~g~--~~iiIGThsl~---------~~~~~f~~LglviiDE 213 (264)
T d1gm5a3 145 AIQHYRRTVESFSKFNIHVALLIGATTPSEKEKIKSGLRNGQ--IDVVIGTHALI---------QEDVHFKNLGLVIIDE 213 (264)
T ss_dssp HHHHHHHHHHHHTCSSCCEEECCSSSCHHHHHHHHHHHHSSC--CCEEEECTTHH---------HHCCCCSCCCEEEEES
T ss_pred hHHHHHHHHHhhhhccccceeeccccchHHHHHHHHHHHCCC--CCEEEeehHHh---------cCCCCccccceeeecc
Confidence 9999998877 3789999999999999999999999987 77777776543 2223345689999999
Q ss_pred cccccccCCCCHHHHHHHHHHHHhCCCCCEEEEeccCChhHHH
Q 009843 167 AHCISSWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQK 209 (524)
Q Consensus 167 aH~i~~~g~~fr~~~~~l~~l~~~~~~~~ii~lSAT~~~~~~~ 209 (524)
-|..+--.. ..+.....+++++.|||||.|+...
T Consensus 214 qH~fgv~Qr---------~~l~~~~~~~~~l~~SATPiprtl~ 247 (264)
T d1gm5a3 214 QHRFGVKQR---------EALMNKGKMVDTLVMSATPIPRSMA 247 (264)
T ss_dssp CCCC--------------CCCCSSSSCCCEEEEESSCCCHHHH
T ss_pred ccccchhhH---------HHHHHhCcCCCEEEEECCCCHHHHH
Confidence 999753211 1233334478899999999998755
No 34
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.70 E-value=4.3e-17 Score=150.57 Aligned_cols=136 Identities=23% Similarity=0.132 Sum_probs=96.8
Q ss_pred CCCHHHHHHHHHHHcCCCEEEEcCCCChHHHHHHHHHhcCCCeEEEeCcHHHHHHHHHHHHHHcCCceeEeccCCCHHHH
Q 009843 38 QFRDKQLDAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAKPGIVLVVSPLIALMENQVIGLKEKGIAGEFLSSTQTMQVK 117 (524)
Q Consensus 38 ~~r~~Q~~~i~~~l~g~d~lv~apTGsGKTl~~~lp~l~~~~~~lvl~P~~~L~~q~~~~l~~~gi~~~~~~~~~~~~~~ 117 (524)
++|++|.++++.+++++..++.+|||+|||++++..+....+++||++|+++|+.|+.+.++.++........+..
T Consensus 70 ~Lr~yQ~eav~~~~~~~~~ll~~~tG~GKT~~a~~~~~~~~~~~Liv~p~~~L~~q~~~~~~~~~~~~~~~~~~~~---- 145 (206)
T d2fz4a1 70 SLRDYQEKALERWLVDKRGCIVLPTGSGKTHVAMAAINELSTPTLIVVPTLALAEQWKERLGIFGEEYVGEFSGRI---- 145 (206)
T ss_dssp CCCHHHHHHHHHHTTTSEEEEEESSSTTHHHHHHHHHHHSCSCEEEEESSHHHHHHHHHHHGGGCGGGEEEESSSC----
T ss_pred CcCHHHHHHHHHHHhCCCcEEEeCCCCCceehHHhHHHHhcCceeEEEcccchHHHHHHHHHhhcccchhhccccc----
Confidence 6899999999999999889999999999999887777667889999999999999999999987654332222211
Q ss_pred HHHHHHhhcCCCcccEEEeCcccccChhhHHHHHhhhccCCccEEEEeccccccccCCCCHHHHHHHHHHHHhCCCCCEE
Q 009843 118 TKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYLPDVPIL 197 (524)
Q Consensus 118 ~~~~~~l~~~~~~~~ll~~tpe~v~t~~~~~~l~~~~~~~~l~~iViDEaH~i~~~g~~fr~~~~~l~~l~~~~~~~~ii 197 (524)
.....+.+.|.+.+ ....+. ....+++||+||||++.. ..+..+...++...++
T Consensus 146 ----------~~~~~i~i~t~~~~------~~~~~~-~~~~~~lvIiDEaH~~~a---------~~~~~i~~~~~~~~~l 199 (206)
T d2fz4a1 146 ----------KELKPLTVSTYDSA------YVNAEK-LGNRFMLLIFDEVHHLPA---------ESYVQIAQMSIAPFRL 199 (206)
T ss_dssp ----------BCCCSEEEEEHHHH------HHTHHH-HTTTCSEEEEECSSCCCT---------TTHHHHHHTCCCSEEE
T ss_pred ----------ccccccccceehhh------hhhhHh-hCCcCCEEEEECCeeCCc---------HHHHHHHhccCCCcEE
Confidence 01123444444332 111111 124589999999999853 1223445566555689
Q ss_pred EEeccC
Q 009843 198 ALTATA 203 (524)
Q Consensus 198 ~lSAT~ 203 (524)
+||||+
T Consensus 200 gLTATl 205 (206)
T d2fz4a1 200 GLTATF 205 (206)
T ss_dssp EEEESC
T ss_pred EEecCC
Confidence 999997
No 35
>d1rifa_ c.37.1.23 (A:) DNA helicase UvsW {Bacteriophage T4 [TaxId: 10665]}
Probab=99.61 E-value=4.1e-16 Score=150.68 Aligned_cols=144 Identities=18% Similarity=0.157 Sum_probs=97.7
Q ss_pred CCCHHHHHHHHHHHcCCCEEEEcCCCChHHHHHHHHH----hcCCCeEEEeCcHHHHHHHHHHHHHHcCCce----eEec
Q 009843 38 QFRDKQLDAIQAVLSGRDCFCLMPTGGGKSMCYQIPA----LAKPGIVLVVSPLIALMENQVIGLKEKGIAG----EFLS 109 (524)
Q Consensus 38 ~~r~~Q~~~i~~~l~g~d~lv~apTGsGKTl~~~lp~----l~~~~~~lvl~P~~~L~~q~~~~l~~~gi~~----~~~~ 109 (524)
.||++|.+|+..+++.+..++.+|||+|||++....+ .....++|||+|+++|+.|+.+.+.+.+... ....
T Consensus 113 ~~rdyQ~~av~~~l~~~~~il~~pTGsGKT~i~~~i~~~~~~~~~~k~Liivp~~~Lv~Q~~~~f~~~~~~~~~~~~~~~ 192 (282)
T d1rifa_ 113 EPHWYQKDAVFEGLVNRRRILNLPTSAGRSLIQALLARYYLENYEGKILIIVPTTALTTQMADDFVDYRLFSHAMIKKIG 192 (282)
T ss_dssp CCCHHHHHHHHHHHHHSEEEECCCTTSCHHHHHHHHHHHHHHHCSSEEEEECSSHHHHHHHHHHHHHHTSCCGGGEEECS
T ss_pred ccchHHHHHHHHHHhcCCceeEEEcccCccHHHHHHHHHhhhcccceEEEEEcCchhHHHHHHHHHHhhccccccceeec
Confidence 6999999999999998899999999999998765433 1236789999999999999999999875432 1121
Q ss_pred cCCCHHHHHHHHHHhhcCCCcccEEEeCcccccChhhHHHHHhhhccCCccEEEEeccccccccCCCCHHHHHHHHHHHH
Q 009843 110 STQTMQVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 189 (524)
Q Consensus 110 ~~~~~~~~~~~~~~l~~~~~~~~ll~~tpe~v~t~~~~~~l~~~~~~~~l~~iViDEaH~i~~~g~~fr~~~~~l~~l~~ 189 (524)
++... .........++++|+..+.... . .....+++||+||||++.. ..+..+..
T Consensus 193 ~g~~~---------~~~~~~~~~i~i~t~qs~~~~~------~-~~~~~f~~VIvDEaH~~~a---------~~~~~il~ 247 (282)
T d1rifa_ 193 GGASK---------DDKYKNDAPVVVGTWQTVVKQP------K-EWFSQFGMMMNDECHLATG---------KSISSIIS 247 (282)
T ss_dssp TTCSS---------TTCCCTTCSEEEECHHHHTTSC------G-GGGGGEEEEEEETGGGCCH---------HHHHHHTT
T ss_pred ceecc---------cccccccceEEEEeeehhhhhc------c-cccCCCCEEEEECCCCCCc---------hhHHHHHH
Confidence 11110 0111122456666655443211 1 1123489999999999753 34455666
Q ss_pred hCCCCC-EEEEeccCChh
Q 009843 190 YLPDVP-ILALTATAAPK 206 (524)
Q Consensus 190 ~~~~~~-ii~lSAT~~~~ 206 (524)
.+.+.+ .++||||+...
T Consensus 248 ~~~~~~~rlGlTaT~~~~ 265 (282)
T d1rifa_ 248 GLNNCMFKFGLSGSLRDG 265 (282)
T ss_dssp TCTTCCEEEEECSSCCTT
T ss_pred hccCCCeEEEEEeecCCC
Confidence 666655 59999998654
No 36
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=99.60 E-value=2.4e-16 Score=135.29 Aligned_cols=131 Identities=14% Similarity=0.120 Sum_probs=83.4
Q ss_pred cCCCEEEEcCCCChHHHHHHHHHh----cCCCeEEEeCcHHHHHHHHHHHHHHcCCceeEeccCCCHHHHHHHHHHhhcC
Q 009843 52 SGRDCFCLMPTGGGKSMCYQIPAL----AKPGIVLVVSPLIALMENQVIGLKEKGIAGEFLSSTQTMQVKTKIYEDLDSG 127 (524)
Q Consensus 52 ~g~d~lv~apTGsGKTl~~~lp~l----~~~~~~lvl~P~~~L~~q~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~l~~~ 127 (524)
+|+++++.||||+|||.++...++ ..+.++++++|+++|++|+.+.+...+........... .
T Consensus 6 ~~~~~il~~~tGsGKT~~~~~~~~~~~~~~~~~vli~~p~~~l~~q~~~~~~~~~~~~~~~~~~~~-------------~ 72 (140)
T d1yksa1 6 KGMTTVLDFHPGAGKTRRFLPQILAECARRRLRTLVLAPTRVVLSEMKEAFHGLDVKFHTQAFSAH-------------G 72 (140)
T ss_dssp TTCEEEECCCTTSSTTTTHHHHHHHHHHHTTCCEEEEESSHHHHHHHHHHTTTSCEEEESSCCCCC-------------C
T ss_pred cCCcEEEEcCCCCChhHHHHHHHHHHhhhcCceeeeeecchhHHHHHHHHhhhhhhhhcccccccc-------------c
Confidence 578999999999999977654433 34778999999999999998887665443322221110 0
Q ss_pred CCcccEEEeCcccccChhhHHHHHhhhccCCccEEEEeccccccccCCCCHHHHHHHHHHHHhCCCCCEEEEeccCC
Q 009843 128 KPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYLPDVPILALTATAA 204 (524)
Q Consensus 128 ~~~~~ll~~tpe~v~t~~~~~~l~~~~~~~~l~~iViDEaH~i~~~g~~fr~~~~~l~~l~~~~~~~~ii~lSAT~~ 204 (524)
.........+... +...........+++++|+||||++..++. ..+.+...+...++.++++||||+|
T Consensus 73 ~~~~~~~~~~~~~-----l~~~~~~~~~~~~~~lvIiDEaH~~~~~~~----~~~~~~~~~~~~~~~~~l~lTATPp 140 (140)
T d1yksa1 73 SGREVIDAMCHAT-----LTYRMLEPTRVVNWEVIIMDEAHFLDPASI----AARGWAAHRARANESATILMTATPP 140 (140)
T ss_dssp CSSCCEEEEEHHH-----HHHHHTSSSCCCCCSEEEETTTTCCSHHHH----HHHHHHHHHHHTTSCEEEEECSSCT
T ss_pred ccccchhhhhHHH-----HHHHHhccccccceeEEEEccccccChhhH----HHHHHHHHHhhCCCCCEEEEEcCCC
Confidence 0112222222211 122233344456799999999999865431 2233334444567889999999986
No 37
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=99.53 E-value=7.8e-15 Score=125.75 Aligned_cols=127 Identities=19% Similarity=0.126 Sum_probs=79.0
Q ss_pred CCEEEEcCCCChHHHHHHHHHhcCCCeEEEeCcHHHHHHHHHHHHHHc-CCceeEeccCCCHHHHHHHHHHhhcCCCccc
Q 009843 54 RDCFCLMPTGGGKSMCYQIPALAKPGIVLVVSPLIALMENQVIGLKEK-GIAGEFLSSTQTMQVKTKIYEDLDSGKPSLR 132 (524)
Q Consensus 54 ~d~lv~apTGsGKTl~~~lp~l~~~~~~lvl~P~~~L~~q~~~~l~~~-gi~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 132 (524)
+..++.+|||+|||+.+...+...+.+++|++|+++|++|+.+.+.+. +........... ......
T Consensus 9 ~~~ll~apTGsGKT~~~~~~~~~~~~~vli~~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~ 75 (136)
T d1a1va1 9 QVAHLHAPTGSGKSTKVPAAYAAQGYKVLVLNPSVAATLGFGAYMSKAHGVDPNIRTGVRT-------------ITTGSP 75 (136)
T ss_dssp EEEEEECCTTSCTTTHHHHHHHTTTCCEEEEESCHHHHHHHHHHHHHHHSCCCEEECSSCE-------------ECCCCS
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHcCCcEEEEcChHHHHHHHHHHHHHHhhccccccccccc-------------cccccc
Confidence 467999999999998776666777889999999999999999988773 333222221110 001122
Q ss_pred EEEeCcccccChhhHHHHHhhhccCCccEEEEeccccccccCCCCHHHHHHHHHHHHhCCCCCEEEEeccC
Q 009843 133 LLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYLPDVPILALTATA 203 (524)
Q Consensus 133 ll~~tpe~v~t~~~~~~l~~~~~~~~l~~iViDEaH~i~~~g~~fr~~~~~l~~l~~~~~~~~ii~lSAT~ 203 (524)
+.+.+.. .... ........++++||||+|.+.... ...|..+....+..++..+++||||+
T Consensus 76 ~~~~~~~------~~~~-~~~~~~~~~~~vIiDE~H~~~~~~---~~~~~~~l~~~~~~~~~~~l~~TATP 136 (136)
T d1a1va1 76 ITYSTYG------KFLA-DGGCSGGAYDIIICDECHSTDATS---ILGIGTVLDQAETAGARLVVLATATP 136 (136)
T ss_dssp EEEEEHH------HHHH-TTGGGGCCCSEEEEETTTCCSHHH---HHHHHHHHHHTTTTTCSEEEEEESSC
T ss_pred eEEEeee------eecc-ccchhhhcCCEEEEecccccCHHH---HHHHHHHHHHHHHCCCCcEEEEeCCC
Confidence 3333322 2111 122334569999999999864311 11233333333344567799999996
No 38
>d1z3ix1 c.37.1.19 (X:390-735) Rad54-like, Rad54L {Zebra fish (Danio rerio) [TaxId: 7955]}
Probab=99.48 E-value=4.5e-13 Score=132.44 Aligned_cols=167 Identities=10% Similarity=0.057 Sum_probs=125.6
Q ss_pred hHHHHHHHHH---HhcCCccEEEEeCccccHHHHHHHHHhCCCceEEEcCCCCHHHHHHHHHHHhcCCCc---EEEEccc
Q 009843 244 DAYADLCSVL---KANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ---VVVATVA 317 (524)
Q Consensus 244 ~~~~~l~~~l---~~~~~~~~IIf~~s~~~~e~l~~~L~~~g~~~~~~h~~l~~~~R~~~~~~f~~g~~~---VlVaT~a 317 (524)
.|+..|.+++ +...+.++|||++.....+.+.+.|...|+.+..+||+++..+|..+++.|.++... +|++|.+
T Consensus 101 ~Kl~~L~~ll~~~~~~~g~KvlIFs~~~~~ld~l~~~l~~~g~~~~~l~G~~~~~~R~~~i~~F~~~~~~~~vlLls~~a 180 (346)
T d1z3ix1 101 GKMLVLDYILAMTRTTTSDKVVLVSNYTQTLDLFEKLCRNRRYLYVRLDGTMSIKKRAKIVERFNNPSSPEFIFMLSSKA 180 (346)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHHHHHHTCCEEEECSSCCHHHHHHHHHHHHSTTCCCCEEEEEGGG
T ss_pred HHHHHHHHHHHHHHHhcCCceeEEeehhhhhHHHHHHHhhhhccccccccchhHHHHHHHHHhhhcccccceeeeecchh
Confidence 4555555554 345678999999999999999999999999999999999999999999999987543 6788899
Q ss_pred ccccccCCCccEEEEeCCCCCHHHHHHHHhhcCCCCCCceEEEEe--ccc--cHHHHHHHHHhccC--------CCCcch
Q 009843 318 FGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYY--GMD--DRRRMEFILSKNQS--------KNSQSF 385 (524)
Q Consensus 318 ~~~GiD~p~v~~VI~~~~p~s~~~y~Q~~GRagR~G~~~~~i~~~--~~~--d~~~~~~l~~~~~~--------~~~~~~ 385 (524)
.|.|+|+..++.||+|+.++++..+.|++||+.|.|+...+.+++ ..+ |...+.....+... ......
T Consensus 181 gg~GlnL~~a~~vi~~d~~wnp~~~~Qa~~R~~R~GQ~~~V~v~rli~~~TiEe~i~~~~~~K~~l~~~v~~~~~~~~~~ 260 (346)
T d1z3ix1 181 GGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSTGTIEEKILQRQAHKKALSSCVVDEEQDVERH 260 (346)
T ss_dssp SCTTCCCTTEEEEEECSCCSSHHHHHHHHTTSSSTTCCSCEEEEEEEETTSHHHHHHHHHHHHHHTSCCCCSCSSSCCCS
T ss_pred hhhccccccceEEEEecCCCccchHhHhhhcccccCCCCceEEEEEEeCCCHHHHHHHHHHHHHHHHHHHhCCchhhhhc
Confidence 999999999999999999999999999999999999987765553 333 22333333322111 111122
Q ss_pred hhHHHHHHHHHhhhccChhHHHHhc
Q 009843 386 STRERWLITVKVLDVAGKRFSRVLG 410 (524)
Q Consensus 386 ~~~~~l~~~~~~~~~~~crr~~~l~ 410 (524)
.+...+.+++.+-+...|.-...+.
T Consensus 261 ~~~~~l~~lf~~~~~~~~~t~~~~~ 285 (346)
T d1z3ix1 261 FSLGELRELFSLNEKTLSDTHDRFR 285 (346)
T ss_dssp SCHHHHHHHTCCCSSCSCHHHHHHT
T ss_pred CCHHHHHHHhcCCCcccccchhhhc
Confidence 3456677777776666666555543
No 39
>d1yksa2 c.37.1.14 (A:325-623) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=99.45 E-value=8.4e-14 Score=134.08 Aligned_cols=107 Identities=18% Similarity=0.173 Sum_probs=85.7
Q ss_pred HHHhcCCccEEEEeCccccHHHHHHHHHhCCCceEEEcCCCCHHHHHHHHHHHhcCCCcEEEEcccccccccCCCccEEE
Q 009843 252 VLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVC 331 (524)
Q Consensus 252 ~l~~~~~~~~IIf~~s~~~~e~l~~~L~~~g~~~~~~h~~l~~~~R~~~~~~f~~g~~~VlVaT~a~~~GiD~p~v~~VI 331 (524)
++.+. +++++|||++...++++++.|++.|..|..+||.+...+++ +|.+|+.+|||||+++++|+|+ +|++||
T Consensus 31 ~i~~~-~g~~~~F~~s~~~~~~~a~~L~~~g~~V~~l~~~~~~~e~~----~~~~~~~~~~~~t~~~~~~~~~-~~~~vi 104 (299)
T d1yksa2 31 WILAD-KRPTAWFLPSIRAANVMAASLRKAGKSVVVLNRKTFEREYP----TIKQKKPDFILATDIAEMGANL-CVERVL 104 (299)
T ss_dssp HHHHC-CSCEEEECSCHHHHHHHHHHHHHTTCCEEECCSSSCC------------CCCSEEEESSSTTCCTTC-CCSEEE
T ss_pred HHHhc-CCCEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCcCcHhHHh----hhhcCCcCEEEEechhhhceec-CceEEE
Confidence 34444 45799999999999999999999999999999999877644 5788999999999999999999 699999
Q ss_pred EeCCC-------------------CCHHHHHHHHhhcCCCCCCceEEEEecc
Q 009843 332 HFNIP-------------------KSMEAFYQESGRAGRDQLPSKSLLYYGM 364 (524)
Q Consensus 332 ~~~~p-------------------~s~~~y~Q~~GRagR~G~~~~~i~~~~~ 364 (524)
+.+++ -|..+-.||.||+||.+....++.+|..
T Consensus 105 d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~qr~gr~gr~~~~~~~~~~y~~ 156 (299)
T d1yksa2 105 DCRTAFKPVLVDEGRKVAIKGPLRISASSAAQRRGRIGRNPNRDGDSYYYSE 156 (299)
T ss_dssp ECCEEEEEEEETTTTEEEEEEEEECCHHHHHHHHTTSSCCTTCCCEEEEECS
T ss_pred ecCceeceeeecCCCCeeEEeeeecCHHHHHHhcccccccCCCceEEEEeCC
Confidence 76642 3889999999999999766667667653
No 40
>d1tf5a4 c.37.1.19 (A:396-570) Translocation ATPase SecA, nucleotide-binding domains {Bacillus subtilis [TaxId: 1423]}
Probab=99.39 E-value=1.9e-12 Score=112.87 Aligned_cols=123 Identities=20% Similarity=0.232 Sum_probs=101.6
Q ss_pred hhhHHHHHHHHHHh--cCCccEEEEeCccccHHHHHHHHHhCCCceEEEcCCCCHHHHHHHHHHHhcCCCcEEEEccccc
Q 009843 242 LDDAYADLCSVLKA--NGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFG 319 (524)
Q Consensus 242 ~~~~~~~l~~~l~~--~~~~~~IIf~~s~~~~e~l~~~L~~~g~~~~~~h~~l~~~~R~~~~~~f~~g~~~VlVaT~a~~ 319 (524)
...++..+.+.+++ ..+.|+||++.|.+.++.+++.|++.|++..++++....++-+.+.+.- ....|.|||+++|
T Consensus 16 ~~eK~~AIi~eV~~~~~~grPVLIgT~SIe~SE~ls~~L~~~gi~h~vLnAk~~~~Ea~II~~Ag--~~g~VtIATNmAG 93 (175)
T d1tf5a4 16 MEGKFKAVAEDVAQRYMTGQPVLVGTVAVETSELISKLLKNKGIPHQVLNAKNHEREAQIIEEAG--QKGAVTIATNMAG 93 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEEESCHHHHHHHHHHHHTTTCCCEEECSSCHHHHHHHHTTTT--STTCEEEEETTSS
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEeCcHHHHHHHHHHHHHcCCCceeehhhhHHHHHHHHHhcc--CCCceeehhhHHH
Confidence 35677777777654 3578999999999999999999999999999999987654433333222 2346999999999
Q ss_pred ccccCC--------CccEEEEeCCCCCHHHHHHHHhhcCCCCCCceEEEEecccc
Q 009843 320 MGIDRK--------DVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDD 366 (524)
Q Consensus 320 ~GiD~p--------~v~~VI~~~~p~s~~~y~Q~~GRagR~G~~~~~i~~~~~~d 366 (524)
+|.|+. +--+||....|.|..-..|..||+||.|.+|.+.+|++.+|
T Consensus 94 RGtDikl~~~v~~~GGLhVI~t~~~~s~Rid~Ql~GR~gRQGdpGs~~~~~sleD 148 (175)
T d1tf5a4 94 RGTDIKLGEGVKELGGLAVVGTERHESRRIDNQLRGRSGRQGDPGITQFYLSMED 148 (175)
T ss_dssp TTCCCCCCTTSGGGTSEEEEESSCCSSHHHHHHHHTTSSGGGCCEEEEEEEETTS
T ss_pred cCCCccchHHHHhCCCcEEEEeccCcchhHHHHHhcchhhhCCCcccEEEEEcCH
Confidence 999974 22489999999999999999999999999999999998887
No 41
>d1z5za1 c.37.1.19 (A:663-906) Helicase of the SNF2/Rad54 hamily {Sulfolobus solfataricus [TaxId: 2287]}
Probab=99.35 E-value=8.5e-13 Score=124.52 Aligned_cols=117 Identities=12% Similarity=0.127 Sum_probs=87.4
Q ss_pred hHHHHHHHHHHh--cCCccEEEEeCccccHHHHHHHHHhC-CCceEEEcCCCCHHHHHHHHHHHhcC-CCcEEEE-cccc
Q 009843 244 DAYADLCSVLKA--NGDTCAIVYCLERTTCDELSAYLSAG-GISCAAYHAGLNDKARSSVLDDWISS-RKQVVVA-TVAF 318 (524)
Q Consensus 244 ~~~~~l~~~l~~--~~~~~~IIf~~s~~~~e~l~~~L~~~-g~~~~~~h~~l~~~~R~~~~~~f~~g-~~~VlVa-T~a~ 318 (524)
.|+..+.+++.. ..+.++||||......+.+...|... |+.+..+||+++..+|..++++|.++ ...|+++ |.+.
T Consensus 69 ~K~~~l~~~l~~~~~~g~kviIFs~~~~~~~~l~~~l~~~~~~~~~~i~G~~~~~~R~~~i~~F~~~~~~~vll~~~~~~ 148 (244)
T d1z5za1 69 GKMIRTMEIIEEALDEGDKIAIFTQFVDMGKIIRNIIEKELNTEVPFLYGELSKKERDDIISKFQNNPSVKFIVLSVKAG 148 (244)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHHHHHHCSCCCEECTTSCHHHHHHHHHHHHHCTTCCEEEEECCTT
T ss_pred hHHHHHHHHHHhhcccccceEEEeeceehHHHHHHHHHhhccceEEEEecccchhccchhhhhhhccccchhcccccccc
Confidence 467777777754 35678999999999999999888755 88999999999999999999999976 4666655 5789
Q ss_pred cccccCCCccEEEEeCCCCCHHHHHHHHhhcCCCCCCceEEE
Q 009843 319 GMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLL 360 (524)
Q Consensus 319 ~~GiD~p~v~~VI~~~~p~s~~~y~Q~~GRagR~G~~~~~i~ 360 (524)
|.|+|++.+++||+++.|+|+..+.|+.||+.|.|+...+.+
T Consensus 149 g~Glnl~~a~~vi~~~~~wn~~~~~Qa~~R~~R~Gq~~~v~i 190 (244)
T d1z5za1 149 GFGINLTSANRVIHFDRWWNPAVEDQATDRVYRIGQTRNVIV 190 (244)
T ss_dssp CCCCCCTTCSEEEECSCCSCTTTC--------------CCEE
T ss_pred ccccccchhhhhhhcCchhhhHHHhhhcceeeecCCCCceEE
Confidence 999999999999999999999999999999999998655443
No 42
>d1z3ix2 c.37.1.19 (X:92-389) Rad54-like, Rad54L {Zebra fish (Danio rerio) [TaxId: 7955]}
Probab=99.21 E-value=3e-11 Score=117.22 Aligned_cols=168 Identities=16% Similarity=0.172 Sum_probs=98.2
Q ss_pred CCCHHHHHHHHHHH---------cCCCEEEEcCCCChHHHHHH--HHHh-cC-------CCeEEEeCcHHHHHHHHHHHH
Q 009843 38 QFRDKQLDAIQAVL---------SGRDCFCLMPTGGGKSMCYQ--IPAL-AK-------PGIVLVVSPLIALMENQVIGL 98 (524)
Q Consensus 38 ~~r~~Q~~~i~~~l---------~g~d~lv~apTGsGKTl~~~--lp~l-~~-------~~~~lvl~P~~~L~~q~~~~l 98 (524)
.++|+|.+++..+. .+..+++.-.+|.|||+..+ +..+ .. .+.+|||+|. +|+.||.+++
T Consensus 55 ~Lr~hQ~~gv~~l~~~~~~~~~~~~~g~iLaDemGlGKT~qaia~l~~l~~~~~~~~~~~~~~LIV~P~-sl~~qW~~Ei 133 (298)
T d1z3ix2 55 VLRPHQREGVKFLWDCVTGRRIENSYGCIMADEMGLGKTLQCITLIWTLLKQSPDCKPEIDKVIVVSPS-SLVRNWYNEV 133 (298)
T ss_dssp TCCHHHHHHHHHHHHHHTTSSSTTCCEEEECCCTTSCHHHHHHHHHHHHHHCCTTSSCSCSCEEEEECH-HHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHhhhhccCCceEEEeCCCCCHHHHHHHHHHHHHHhcccccCCCCcEEEEccc-hhhHHHHHHH
Confidence 68999999998763 23457887899999997432 2222 22 2469999997 5889999998
Q ss_pred HHc---CCceeEeccCCCHHHHHHHHHHhhcCCCcccEEEeCcccccChhhHHHHHhhhccCCccEEEEeccccccccCC
Q 009843 99 KEK---GIAGEFLSSTQTMQVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGH 175 (524)
Q Consensus 99 ~~~---gi~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ll~~tpe~v~t~~~~~~l~~~~~~~~l~~iViDEaH~i~~~g~ 175 (524)
.+. ........+.................. ....++.++.+...+...........+++||+||+|.+...+
T Consensus 134 ~k~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~v~i~sy~~~~~~~~~l~~~~~~~vI~DEaH~ikn~~- 208 (298)
T d1z3ix2 134 GKWLGGRVQPVAIDGGSKDEIDSKLVNFISQQG----MRIPTPILIISYETFRLHAEVLHKGKVGLVICDEGHRLKNSD- 208 (298)
T ss_dssp HHHHGGGCCEEEECSSCHHHHHHHHHHHHCCCS----SCCSCCEEEEEHHHHHHHTTTTTTSCCCEEEETTGGGCCTTC-
T ss_pred HhhcCCceeEEEEeCchHHHHHHHHHHhhhccC----ccccceEEEEeecccccchhcccccceeeeeccccccccccc-
Confidence 873 233334443333322222222222211 111222233343333333333334458899999999997643
Q ss_pred CCHHHHHHHHHHHHhCCCCCEEEEeccCChhHHHHHHHHhCC
Q 009843 176 DFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCL 217 (524)
Q Consensus 176 ~fr~~~~~l~~l~~~~~~~~ii~lSAT~~~~~~~~i~~~l~l 217 (524)
.+.......+.....++||||+..+...++...+.+
T Consensus 209 ------s~~~~a~~~l~~~~rllLTGTPi~N~~~dl~~ll~f 244 (298)
T d1z3ix2 209 ------NQTYLALNSMNAQRRVLISGTPIQNDLLEYFSLVHF 244 (298)
T ss_dssp ------HHHHHHHHHHCCSEEEEECSSCSGGGGGGCHHHHHH
T ss_pred ------chhhhhhhccccceeeeecchHHhhhhHHHHHHHHH
Confidence 222222223344558999999988766666555543
No 43
>d1z63a1 c.37.1.19 (A:432-661) Helicase of the SNF2/Rad54 hamily {Sulfolobus solfataricus [TaxId: 2287]}
Probab=99.07 E-value=1.3e-10 Score=108.16 Aligned_cols=158 Identities=18% Similarity=0.099 Sum_probs=99.4
Q ss_pred CCCHHHHHHHHHHH----cCCCEEEEcCCCChHHHHHHHHH--hc---CCCeEEEeCcHHHHHHHHHHHHHHcCCceeEe
Q 009843 38 QFRDKQLDAIQAVL----SGRDCFCLMPTGGGKSMCYQIPA--LA---KPGIVLVVSPLIALMENQVIGLKEKGIAGEFL 108 (524)
Q Consensus 38 ~~r~~Q~~~i~~~l----~g~d~lv~apTGsGKTl~~~lp~--l~---~~~~~lvl~P~~~L~~q~~~~l~~~gi~~~~~ 108 (524)
+++|+|.+++..+. .+..+++..++|.|||+..+..+ +. ...+++||+| .++..++.+++.+........
T Consensus 12 ~L~~yQ~~~v~~~~~~~~~~~g~iLaDe~GlGKT~~~i~~~~~~~~~~~~~~~LIv~p-~~l~~~W~~e~~~~~~~~~~~ 90 (230)
T d1z63a1 12 NLRPYQIKGFSWMRFMNKLGFGICLADDMGLGKTLQTIAVFSDAKKENELTPSLVICP-LSVLKNWEEELSKFAPHLRFA 90 (230)
T ss_dssp CCCHHHHHHHHHHHHHHHTTCCEEECCCTTSCHHHHHHHHHHHHHHTTCCSSEEEEEC-STTHHHHHHHHHHHCTTSCEE
T ss_pred chhHHHHHHHHHHHHhhhcCCCEEEEeCCCCChHHHHHHhhhhhhhcccccccceecc-hhhhhHHHHHHHhhcccccce
Confidence 68999999997653 34567888899999998754322 11 2467999999 577788888888754332222
Q ss_pred ccCCCHHHHHHHHHHhhcCCCcccEEEeCcccccChhhHHHHHhhhccCCccEEEEeccccccccCCCCHHHHHHHHHHH
Q 009843 109 SSTQTMQVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLR 188 (524)
Q Consensus 109 ~~~~~~~~~~~~~~~l~~~~~~~~ll~~tpe~v~t~~~~~~l~~~~~~~~l~~iViDEaH~i~~~g~~fr~~~~~l~~l~ 188 (524)
........ ....++.+++.+.+.+..... +. ...++++|+||+|.+...+. ......
T Consensus 91 ~~~~~~~~---------~~~~~~~vvi~~~~~~~~~~~---l~----~~~~~~vI~DEah~~k~~~s-------~~~~~~ 147 (230)
T d1z63a1 91 VFHEDRSK---------IKLEDYDIILTTYAVLLRDTR---LK----EVEWKYIVIDEAQNIKNPQT-------KIFKAV 147 (230)
T ss_dssp ECSSSTTS---------CCGGGSSEEEEEHHHHTTCHH---HH----TCCEEEEEEETGGGGSCTTS-------HHHHHH
T ss_pred eeccccch---------hhccCcCEEEeeHHHHHhHHH---Hh----cccceEEEEEhhhcccccch-------hhhhhh
Confidence 21111000 001235677777766544221 11 22478999999999976542 112222
Q ss_pred HhCCCCCEEEEeccCChhHHHHHHHHhCCCC
Q 009843 189 NYLPDVPILALTATAAPKVQKDVMESLCLQN 219 (524)
Q Consensus 189 ~~~~~~~ii~lSAT~~~~~~~~i~~~l~l~~ 219 (524)
..+.....++||||+.++...++...+.+-.
T Consensus 148 ~~l~a~~r~~LTgTPi~n~~~dl~~ll~~l~ 178 (230)
T d1z63a1 148 KELKSKYRIALTGTPIENKVDDLWSIMTFLN 178 (230)
T ss_dssp HTSCEEEEEEECSSCSTTCHHHHHHHHHHHS
T ss_pred hhhccceEEEEecchHHhHHHHHHHHHHhhC
Confidence 3344445899999999888888777766533
No 44
>d1nkta4 c.37.1.19 (A:397-615) Translocation ATPase SecA, nucleotide-binding domains {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=98.84 E-value=1.1e-08 Score=90.25 Aligned_cols=122 Identities=20% Similarity=0.205 Sum_probs=100.1
Q ss_pred hhHHHHHHHHHHh--cCCccEEEEeCccccHHHHHHHHHhCCCceEEEcCCCCHHHHHHHHHHHhcC-CCcEEEEccccc
Q 009843 243 DDAYADLCSVLKA--NGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISS-RKQVVVATVAFG 319 (524)
Q Consensus 243 ~~~~~~l~~~l~~--~~~~~~IIf~~s~~~~e~l~~~L~~~g~~~~~~h~~l~~~~R~~~~~~f~~g-~~~VlVaT~a~~ 319 (524)
..|+..+.+.++. ..+.|+||-+.|.+..|.+++.|.+.|++..++++.-..++-..+-+ .| ...|-|||+++|
T Consensus 17 ~~K~~Avv~ei~~~h~~GqPVLVGT~SVe~SE~lS~lL~~~gi~h~vLNAK~herEAeIIAq---AG~~GaVTIATNMAG 93 (219)
T d1nkta4 17 EAKYIAVVDDVAERYAKGQPVLIGTTSVERSEYLSRQFTKRRIPHNVLNAKYHEQEATIIAV---AGRRGGVTVATNMAG 93 (219)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHHHHTTCCCEEECSSCHHHHHHHHHT---TTSTTCEEEEETTCS
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEeeCcHHHHHHHHHHHHHhccchhccchhhHHHHHHHHHh---cccCCcEEeeccccC
Confidence 5677777777654 46789999999999999999999999999999999855433232222 34 346999999999
Q ss_pred ccccCCC-----------------------------------------------c-----cEEEEeCCCCCHHHHHHHHh
Q 009843 320 MGIDRKD-----------------------------------------------V-----RLVCHFNIPKSMEAFYQESG 347 (524)
Q Consensus 320 ~GiD~p~-----------------------------------------------v-----~~VI~~~~p~s~~~y~Q~~G 347 (524)
+|.|+.= | =+||-...-.|..-=-|-.|
T Consensus 94 RGTDI~LGgn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~GGL~VIGTErHeSrRIDnQLRG 173 (219)
T d1nkta4 94 RGTDIVLGGNVDFLTDQRLRERGLDPVETPEEYEAAWHSELPIVKEEASKEAKEVIEAGGLYVLGTERHESRRIDNQLRG 173 (219)
T ss_dssp TTCCCCTTCCHHHHHHHHHHHTTCCTTTSHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTSEEEEECSCCSSHHHHHHHHH
T ss_pred CCCceeecCchhhhhHHHhhhcccCcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeccccccccccccccc
Confidence 9999831 1 27888888889999999999
Q ss_pred hcCCCCCCceEEEEeccccH
Q 009843 348 RAGRDQLPSKSLLYYGMDDR 367 (524)
Q Consensus 348 RagR~G~~~~~i~~~~~~d~ 367 (524)
|+||.|.||.+..|++.+|.
T Consensus 174 RsGRQGDPGsSrFflSLeDd 193 (219)
T d1nkta4 174 RSGRQGDPGESRFYLSLGDE 193 (219)
T ss_dssp TSSGGGCCEEEEEEEETTSH
T ss_pred cccccCCCccceeEEeccHH
Confidence 99999999999999999875
No 45
>d1tf5a3 c.37.1.19 (A:1-226,A:349-395) Translocation ATPase SecA, nucleotide-binding domains {Bacillus subtilis [TaxId: 1423]}
Probab=98.67 E-value=7.3e-08 Score=88.86 Aligned_cols=178 Identities=16% Similarity=0.123 Sum_probs=119.2
Q ss_pred HHHHHHHHcCCCCCCHHHHHHHHHHHcCCCEEEEcCCCChHHHHHHHHHhcC---CCeEEEeCcHHHHHHHHHHHHHH--
Q 009843 26 LVKLLRWHFGHAQFRDKQLDAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAK---PGIVLVVSPLIALMENQVIGLKE-- 100 (524)
Q Consensus 26 ~~~~l~~~fg~~~~r~~Q~~~i~~~l~g~d~lv~apTGsGKTl~~~lp~l~~---~~~~lvl~P~~~L~~q~~~~l~~-- 100 (524)
+.++.++++|. .+.+.|.-..-.+.+|+ ++.|.||-|||++..+|+... +..+-||+..--|+..-.+++..
T Consensus 69 VREAakRtlG~-RhyDVQLiGgi~L~~G~--iaem~TGEGKTL~a~l~a~l~al~g~~vhvvTvNdyLA~RDae~m~~iy 145 (273)
T d1tf5a3 69 VREASRRVTGM-FPFKVQLMGGVALHDGN--IAEMKTGEGKTLTSTLPVYLNALTGKGVHVVTVNEYLASRDAEQMGKIF 145 (273)
T ss_dssp HHHHHHHHHSC-CCCHHHHHHHHHHHTTS--EEECCTTSCHHHHHHHHHHHHHTTSSCEEEEESSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhce-EEehhHHHHHHHHHhhh--heeecCCCcchhHHHHHHHHHHhcCCCceEEecCccccchhhhHHhHHH
Confidence 45666788887 57788888777788886 999999999999999998653 66778888878888865655444
Q ss_pred --cCCceeEeccCCCHHHHHHHHHHhhcCCCcccEEEeCcccccChhhHHHHH---hhhccCCccEEEEecccccc-ccC
Q 009843 101 --KGIAGEFLSSTQTMQVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLK---KIHSRGLLNLVAIDEAHCIS-SWG 174 (524)
Q Consensus 101 --~gi~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ll~~tpe~v~t~~~~~~l~---~~~~~~~l~~iViDEaH~i~-~~g 174 (524)
+|+.+....+.....++...+. .+|+|+|..-++-.-+...+. ....++.+.+.||||+|.+. +..
T Consensus 146 ~~lGlsvg~~~~~~~~~~r~~~Y~--------~di~Ygt~~e~~fDyLrd~~~~~~~~~~~r~~~~aIvDEvDsiliDea 217 (273)
T d1tf5a3 146 EFLGLTVGLNLNSMSKDEKREAYA--------ADITYSTNNELGFDYLRDNMVLYKEQMVQRPLHFAVIDEVDSILIDEA 217 (273)
T ss_dssp HHTTCCEEECCTTSCHHHHHHHHH--------SSEEEEEHHHHHHHHHHHTTCSSGGGCCCCCCCEEEEETHHHHHTTTT
T ss_pred HHcCCCccccccccCHHHHHHHhh--------CCceecchhhhhhhhcchhhhcChhhhccCCCCEEEEEcchhhhhhcc
Confidence 7999999999988888877775 789999876554333333221 12234558999999999984 211
Q ss_pred CC-------CHH-HHHHHHHHHHhCCCCCEEEEeccCChhHHHHHHHHhCC
Q 009843 175 HD-------FRP-SYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCL 217 (524)
Q Consensus 175 ~~-------fr~-~~~~l~~l~~~~~~~~ii~lSAT~~~~~~~~i~~~l~l 217 (524)
.. -+. ..-....+.+.+ .++.+||+|+..+ ...+.+..++
T Consensus 218 rtpliisg~~~~~a~it~q~~f~~y--~~l~gmtgta~~~-~~e~~~iy~l 265 (273)
T d1tf5a3 218 RTPLIISGQSMTLATITFQNYFRMY--EKLAGMTGTAKTE-EEEFRNIYNM 265 (273)
T ss_dssp TCEEEEEEEEEEEEEEEHHHHHTTS--SEEEEEESCCGGG-HHHHHHHHCC
T ss_pred CCceEeccCccchhhhhHHHHHHHH--HHHhCCccccHHH-HHHHHhccCC
Confidence 00 000 000012233333 2578899998554 3445555544
No 46
>d1nkta3 c.37.1.19 (A:-15-225,A:350-396) Translocation ATPase SecA, nucleotide-binding domains {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=98.53 E-value=1.9e-07 Score=86.48 Aligned_cols=134 Identities=17% Similarity=0.100 Sum_probs=99.0
Q ss_pred HHHHHHHcCCCCCCHHHHHHHHHHHcCCCEEEEcCCCChHHHHHHHHHhcC---CCeEEEeCcHHHHHHHHHHHHH----
Q 009843 27 VKLLRWHFGHAQFRDKQLDAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAK---PGIVLVVSPLIALMENQVIGLK---- 99 (524)
Q Consensus 27 ~~~l~~~fg~~~~r~~Q~~~i~~~l~g~d~lv~apTGsGKTl~~~lp~l~~---~~~~lvl~P~~~L~~q~~~~l~---- 99 (524)
.++.++..|. .+.+.|.-.--++.+|+ ++.|.||-|||++..+|+... +..+-||+..--|+..-.+++.
T Consensus 87 REAakRtlGm-RhyDVQLiGgi~l~~g~--iaem~TGEGKTL~a~l~a~l~al~g~~vhvvTvNdyLA~RDa~~m~~~y~ 163 (288)
T d1nkta3 87 REAAWRVLDQ-RPFDVQVMGAAALHLGN--VAEMKTGEGKTLTCVLPAYLNALAGNGVHIVTVNDYLAKRDSEWMGRVHR 163 (288)
T ss_dssp HHHHHHHHSC-CCCHHHHHHHHHHHTTE--EEECCTTSCHHHHTHHHHHHHHTTTSCEEEEESSHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhccc-eeeeehhHHHHHHhhhh--hhcccCCCchhHHHHHHHHHHHhcCCCeEEEecCchhhhhhHHHHHHHHH
Confidence 4555677786 46678887777777764 999999999999999998653 6677788887888886565544
Q ss_pred HcCCceeEeccCCCHHHHHHHHHHhhcCCCcccEEEeCcccccChhhHHHHH---hhhccCCccEEEEecccccc
Q 009843 100 EKGIAGEFLSSTQTMQVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLK---KIHSRGLLNLVAIDEAHCIS 171 (524)
Q Consensus 100 ~~gi~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ll~~tpe~v~t~~~~~~l~---~~~~~~~l~~iViDEaH~i~ 171 (524)
.+|+.+..+.+.....++...+. .+|+|+|.--++-.-+...+. ....++.+.+.||||+|.+.
T Consensus 164 ~lGlsvg~~~~~~~~~~~~~~Y~--------~di~Y~t~~e~gfDyLrd~~~~~~~~~~~r~~~~aIvDEvDsiL 230 (288)
T d1nkta3 164 FLGLQVGVILATMTPDERRVAYN--------ADITYGTNNEFGFDYLRDNMAHSLDDLVQRGHHYAIVDEVDSIL 230 (288)
T ss_dssp HTTCCEEECCTTCCHHHHHHHHH--------SSEEEEEHHHHHHHHHHHTTCSSGGGCCCCCCCEEEETTHHHHH
T ss_pred HhCCCcCcccccCChHHHHHHhh--------cccccccHHHHhhhhhhhhhccChhhhcccCCcEEEEEcccccc
Confidence 37999999999999988877765 789999876554333333331 12234558899999999974
No 47
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]}
Probab=97.61 E-value=0.00019 Score=69.81 Aligned_cols=76 Identities=18% Similarity=0.083 Sum_probs=56.7
Q ss_pred hHHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCEEEEcCCCChHHHHH--HHHHhc-----CCCeEEEeCcHHHHHHHHH
Q 009843 23 KEALVKLLRWHFGHAQFRDKQLDAIQAVLSGRDCFCLMPTGGGKSMCY--QIPALA-----KPGIVLVVSPLIALMENQV 95 (524)
Q Consensus 23 ~~~~~~~l~~~fg~~~~r~~Q~~~i~~~l~g~d~lv~apTGsGKTl~~--~lp~l~-----~~~~~lvl~P~~~L~~q~~ 95 (524)
...+...+.+.|.-....++|++|+..++.++-+++.+|.|+|||... .+.++. .+.++++++||..-+....
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~Q~~A~~~al~~~~~vI~G~pGTGKTt~i~~~l~~l~~~~~~~~~~I~l~ApTgkAA~~L~ 212 (359)
T d1w36d1 133 EALLAQTLDKLFPVSDEINWQKVAAAVALTRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLT 212 (359)
T ss_dssp HHHHHHHHHTTCCCTTSCCHHHHHHHHHHTBSEEEEECCTTSTHHHHHHHHHHHHHHTCSSCCCCEEEEBSSHHHHHHHH
T ss_pred hHHHHHHHHHhccCcccccHHHHHHHHHHcCCeEEEEcCCCCCceehHHHHHHHHHHHHhccCCeEEEecCcHHHHHHHH
Confidence 445666677777777788999999999999888999999999999653 222232 2457999999987766544
Q ss_pred HHH
Q 009843 96 IGL 98 (524)
Q Consensus 96 ~~l 98 (524)
+.+
T Consensus 213 e~~ 215 (359)
T d1w36d1 213 ESL 215 (359)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 48
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=96.83 E-value=0.0025 Score=58.62 Aligned_cols=89 Identities=11% Similarity=-0.017 Sum_probs=67.8
Q ss_pred CCccEEEEeCccccHHHHHHHHHh----CCCceEEEcCCCCHHHHHHHHHHHhcCCCcEEEEccc-ccccccCCCccEEE
Q 009843 257 GDTCAIVYCLERTTCDELSAYLSA----GGISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVA-FGMGIDRKDVRLVC 331 (524)
Q Consensus 257 ~~~~~IIf~~s~~~~e~l~~~L~~----~g~~~~~~h~~l~~~~R~~~~~~f~~g~~~VlVaT~a-~~~GiD~p~v~~VI 331 (524)
.+.++++.++|.--+++.++.+++ .|+.+..+||+++..+|..+..+..+|+++|||+|-+ +...+.+.++.+||
T Consensus 131 ~g~q~~~m~Pt~~La~Qh~~~~~~~f~~~~~~v~~l~~~~~~~~r~~~~~~~~~g~~~iiIGThsl~~~~~~f~~Lglvi 210 (264)
T d1gm5a3 131 AGFQTAFMVPTSILAIQHYRRTVESFSKFNIHVALLIGATTPSEKEKIKSGLRNGQIDVVIGTHALIQEDVHFKNLGLVI 210 (264)
T ss_dssp HTSCEEEECSCHHHHHHHHHHHHHHHTCSSCCEEECCSSSCHHHHHHHHHHHHSSCCCEEEECTTHHHHCCCCSCCCEEE
T ss_pred cccceeEEeehHhhhHHHHHHHHHhhhhccccceeeccccchHHHHHHHHHHHCCCCCEEEeehHHhcCCCCccccceee
Confidence 356899999999888887766654 4889999999999999999999999999999999965 55678888998887
Q ss_pred EeCCCCCHHHHHHHHh
Q 009843 332 HFNIPKSMEAFYQESG 347 (524)
Q Consensus 332 ~~~~p~s~~~y~Q~~G 347 (524)
.=.- .--+|.||.+
T Consensus 211 iDEq--H~fgv~Qr~~ 224 (264)
T d1gm5a3 211 IDEQ--HRFGVKQREA 224 (264)
T ss_dssp EESC--CCC-----CC
T ss_pred eccc--cccchhhHHH
Confidence 4331 2235667643
No 49
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=96.78 E-value=0.00055 Score=64.42 Aligned_cols=61 Identities=15% Similarity=0.163 Sum_probs=46.2
Q ss_pred CCCHHHHHHHHHHHcCCCEEEEcCCCChHHHHHHH--HHh-c----CCCeEEEeCcHHHHHHHHHHHHHH
Q 009843 38 QFRDKQLDAIQAVLSGRDCFCLMPTGGGKSMCYQI--PAL-A----KPGIVLVVSPLIALMENQVIGLKE 100 (524)
Q Consensus 38 ~~r~~Q~~~i~~~l~g~d~lv~apTGsGKTl~~~l--p~l-~----~~~~~lvl~P~~~L~~q~~~~l~~ 100 (524)
+++|-|.+|+.. ....++|.|+.|||||.+.+. .-+ . ...+++|++++++++......+.+
T Consensus 1 ~L~~eQ~~av~~--~~~~~lI~g~aGTGKTt~l~~rv~~ll~~~~~~~~~ILvlt~tn~a~~~i~~~~~~ 68 (306)
T d1uaaa1 1 RLNPGQQQAVEF--VTGPCLVLAGAGSGKTRVITNKIAHLIRGCGYQARHIAAVTFTNKAAREMKERVGQ 68 (306)
T ss_dssp CCCHHHHHHHHC--CSSEEEECCCTTSCHHHHHHHHHHHHHHHHCCCGGGEEEEESSHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHhC--CCCCEEEEeeCCccHHHHHHHHHHHHHHhcCCChhHEEEEeCcHHHHHHHHHHHHH
Confidence 478999999975 345689999999999976432 111 1 245899999999999887777765
No 50
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.54 E-value=0.0078 Score=53.88 Aligned_cols=50 Identities=14% Similarity=0.179 Sum_probs=32.8
Q ss_pred ccccccccccCCCCChhHHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCEEEEcCCCChHHHHH
Q 009843 7 AMQSTSQTQKNKPLHEKEALVKLLRWHFGHAQFRDKQLDAIQAVLSGRDCFCLMPTGGGKSMCY 70 (524)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~l~~~fg~~~~r~~Q~~~i~~~l~g~d~lv~apTGsGKTl~~ 70 (524)
||...+....+.++..++++.+.|+..+.-.. ..++++.||+|+|||...
T Consensus 1 ~w~~ky~P~~~~diig~~~~~~~l~~~i~~~~--------------~~~lll~Gp~G~GKTtl~ 50 (237)
T d1sxjd2 1 PWVEKYRPKNLDEVTAQDHAVTVLKKTLKSAN--------------LPHMLFYGPPGTGKTSTI 50 (237)
T ss_dssp CHHHHTCCSSTTTCCSCCTTHHHHHHHTTCTT--------------CCCEEEECSTTSSHHHHH
T ss_pred CcchhhCCCCHHHccCcHHHHHHHHHHHHcCC--------------CCeEEEECCCCCChHHHH
Confidence 56666666677777666666666665432111 135899999999999653
No 51
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.44 E-value=0.0048 Score=55.12 Aligned_cols=51 Identities=14% Similarity=0.055 Sum_probs=37.8
Q ss_pred ccccccccccccCCCCChhHHHHHHHHHHcCCCCCCHHHHHHHHHHHcC--CCEEEEcCCCChHHHHHH
Q 009843 5 PLAMQSTSQTQKNKPLHEKEALVKLLRWHFGHAQFRDKQLDAIQAVLSG--RDCFCLMPTGGGKSMCYQ 71 (524)
Q Consensus 5 p~~~~~~~~~~~~~~~~~~~~~~~~l~~~fg~~~~r~~Q~~~i~~~l~g--~d~lv~apTGsGKTl~~~ 71 (524)
-+||...+....+.++-.++++...|+... .++ .++++.||+|+|||.+..
T Consensus 2 ~~pw~eKyrP~~~~d~ig~~~~~~~L~~~~----------------~~~~~~~~ll~Gp~G~GKTt~a~ 54 (224)
T d1sxjb2 2 QLPWVEKYRPQVLSDIVGNKETIDRLQQIA----------------KDGNMPHMIISGMPGIGKTTSVH 54 (224)
T ss_dssp CCCHHHHTCCSSGGGCCSCTHHHHHHHHHH----------------HSCCCCCEEEECSTTSSHHHHHH
T ss_pred CCchHhHhCCCCHHHhcCCHHHHHHHHHHH----------------HcCCCCeEEEECCCCCCchhhHH
Confidence 468888888888888877777777776632 222 358999999999997653
No 52
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=96.37 E-value=0.033 Score=48.94 Aligned_cols=127 Identities=10% Similarity=0.068 Sum_probs=69.4
Q ss_pred EEEEcCCCChHHHHHH-HHH--hcCCCeEEEeC--cHHHHHHHHHHHHHH-cCCceeEeccCCCHHHHHHHHHHhhcCCC
Q 009843 56 CFCLMPTGGGKSMCYQ-IPA--LAKPGIVLVVS--PLIALMENQVIGLKE-KGIAGEFLSSTQTMQVKTKIYEDLDSGKP 129 (524)
Q Consensus 56 ~lv~apTGsGKTl~~~-lp~--l~~~~~~lvl~--P~~~L~~q~~~~l~~-~gi~~~~~~~~~~~~~~~~~~~~l~~~~~ 129 (524)
+++++|||+|||.+.. |.+ ...+.++.+++ ..|.=+.+|.+.+.+ ++++............
T Consensus 12 i~lvGptGvGKTTTiAKLA~~~~~~g~kV~lit~Dt~R~gA~eQL~~~a~~l~v~~~~~~~~~d~~~------------- 78 (211)
T d2qy9a2 12 ILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGADSAS------------- 78 (211)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHHTTTCCEEEECCCTTCHHHHHHHHHHHHHTTCCEECCSTTCCHHH-------------
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEecccccccchhhhhhhhhhcCCcccccccCCCHHH-------------
Confidence 5678999999996643 322 12344555554 345556666666544 6666544333322111
Q ss_pred cccEEEeCcccccChhhHHHHHhhhccCCccEEEEeccccccccCCCCHHHHHHHHHHHHhC-------CCCCEEEEecc
Q 009843 130 SLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYL-------PDVPILALTAT 202 (524)
Q Consensus 130 ~~~ll~~tpe~v~t~~~~~~l~~~~~~~~l~~iViDEaH~i~~~g~~fr~~~~~l~~l~~~~-------~~~~ii~lSAT 202 (524)
.+............++++||=+=+... -.....+|..+.+.. |.-.++.++||
T Consensus 79 ----------------~l~~~~~~a~~~~~d~ilIDTaGr~~~----d~~~~~el~~l~~~~~~~~~~~p~~~~LVl~a~ 138 (211)
T d2qy9a2 79 ----------------VIFDAIQAAKARNIDVLIADTAGRLQN----KSHLMEELKKIVRVMKKLDVEAPHEVMLTIDAS 138 (211)
T ss_dssp ----------------HHHHHHHHHHHTTCSEEEECCCCCGGG----HHHHHHHHHHHHHHHTTTCTTCCSEEEEEEEGG
T ss_pred ----------------HHHHHHHHHHHcCCCEEEeccCCCccc----cHHHHHHHHHHHHHHhhhcccCcceeeeehhcc
Confidence 111111112223478899998865321 223334455444432 44558899999
Q ss_pred CChhHHHHHHHHh
Q 009843 203 AAPKVQKDVMESL 215 (524)
Q Consensus 203 ~~~~~~~~i~~~l 215 (524)
........+....
T Consensus 139 ~~~~~~~~~~~~~ 151 (211)
T d2qy9a2 139 TGQNAVSQAKLFH 151 (211)
T ss_dssp GTHHHHHHHHHHH
T ss_pred cCcchHHHHhhhh
Confidence 9888777666654
No 53
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=96.35 E-value=0.029 Score=49.27 Aligned_cols=129 Identities=12% Similarity=0.021 Sum_probs=68.7
Q ss_pred CCEEEEcCCCChHHHHHH-HHH--hcCCCeEEEeC--cHHHHHHHHHHHHHH-cCCceeEeccCCCHHHHHHHHHHhhcC
Q 009843 54 RDCFCLMPTGGGKSMCYQ-IPA--LAKPGIVLVVS--PLIALMENQVIGLKE-KGIAGEFLSSTQTMQVKTKIYEDLDSG 127 (524)
Q Consensus 54 ~d~lv~apTGsGKTl~~~-lp~--l~~~~~~lvl~--P~~~L~~q~~~~l~~-~gi~~~~~~~~~~~~~~~~~~~~l~~~ 127 (524)
+-+++++|||+|||.+.. |++ ..++.++.+++ ..|.=+.+|.+.+.+ ++++.............
T Consensus 7 ~vi~lvGptGvGKTTTiaKLA~~~~~~g~kV~lit~Dt~R~gA~eQL~~~a~~l~i~~~~~~~~~d~~~~---------- 76 (207)
T d1okkd2 7 RVVLVVGVNGVGKTTTIAKLGRYYQNLGKKVMFCAGDTFRAAGGTQLSEWGKRLSIPVIQGPEGTDPAAL---------- 76 (207)
T ss_dssp SEEEEECSTTSSHHHHHHHHHHHHHTTTCCEEEECCCCSSTTHHHHHHHHHHHHTCCEECCCTTCCHHHH----------
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEEeccccccchhhHhhcccccCceEEeccCCccHHHH----------
Confidence 446789999999996643 222 22345555555 345656666665544 56554333222221111
Q ss_pred CCcccEEEeCcccccChhhHHHHHhhhccCCccEEEEeccccccccCCCCHHHHHHHHHHHHh-------CCCCCEEEEe
Q 009843 128 KPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY-------LPDVPILALT 200 (524)
Q Consensus 128 ~~~~~ll~~tpe~v~t~~~~~~l~~~~~~~~l~~iViDEaH~i~~~g~~fr~~~~~l~~l~~~-------~~~~~ii~lS 200 (524)
..+..........++|+||=+=+... -.....++..+.+. .|.-.++.++
T Consensus 77 -------------------~~~~~~~~~~~~~d~ilIDTaGr~~~----d~~l~~el~~~~~~~~~~~~~~p~~~~LVl~ 133 (207)
T d1okkd2 77 -------------------AYDAVQAMKARGYDLLFVDTAGRLHT----KHNLMEELKKVKRAIAKADPEEPKEVWLVLD 133 (207)
T ss_dssp -------------------HHHHHHHHHHHTCSEEEECCCCCCTT----CHHHHHHHHHHHHHHHHHCTTCCSEEEEEEE
T ss_pred -------------------HHHHHHHHHHCCCCEEEcCccccchh----hHHHHHHHHHHHHHhhhcccCCCceEEEEee
Confidence 00111111122367888888876432 22333444444332 2344588999
Q ss_pred ccCChhHHHHHHHHh
Q 009843 201 ATAAPKVQKDVMESL 215 (524)
Q Consensus 201 AT~~~~~~~~i~~~l 215 (524)
||...+....+....
T Consensus 134 a~~~~~~~~~~~~~~ 148 (207)
T d1okkd2 134 AVTGQNGLEQAKKFH 148 (207)
T ss_dssp TTBCTHHHHHHHHHH
T ss_pred cccCchHHHHHHHhh
Confidence 999988777666654
No 54
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.31 E-value=0.0051 Score=54.93 Aligned_cols=49 Identities=14% Similarity=0.198 Sum_probs=35.4
Q ss_pred cccccccccccCCCCChhHHHHHHHHHHcCCCCCCHHHHHHHHHHHcC--CCEEEEcCCCChHHHHH
Q 009843 6 LAMQSTSQTQKNKPLHEKEALVKLLRWHFGHAQFRDKQLDAIQAVLSG--RDCFCLMPTGGGKSMCY 70 (524)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~fg~~~~r~~Q~~~i~~~l~g--~d~lv~apTGsGKTl~~ 70 (524)
+||...+....+.++..++++.+.|+... ..+ .++++.||+|+|||...
T Consensus 2 ~pw~ekyrP~~~~divg~~~~~~~L~~~i----------------~~~~~~~lLl~Gp~G~GKttl~ 52 (227)
T d1sxjc2 2 LPWVEKYRPETLDEVYGQNEVITTVRKFV----------------DEGKLPHLLFYGPPGTGKTSTI 52 (227)
T ss_dssp CCHHHHTCCSSGGGCCSCHHHHHHHHHHH----------------HTTCCCCEEEECSSSSSHHHHH
T ss_pred CchhhhhCCCCHHHccCcHHHHHHHHHHH----------------HcCCCCeEEEECCCCCChhHHH
Confidence 46777777777777777777777777642 122 25899999999999654
No 55
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=96.20 E-value=0.0025 Score=60.14 Aligned_cols=61 Identities=15% Similarity=0.202 Sum_probs=46.7
Q ss_pred CCCHHHHHHHHHHHcCCCEEEEcCCCChHHHHHHH--HHh-cC----CCeEEEeCcHHHHHHHHHHHHHH
Q 009843 38 QFRDKQLDAIQAVLSGRDCFCLMPTGGGKSMCYQI--PAL-AK----PGIVLVVSPLIALMENQVIGLKE 100 (524)
Q Consensus 38 ~~r~~Q~~~i~~~l~g~d~lv~apTGsGKTl~~~l--p~l-~~----~~~~lvl~P~~~L~~q~~~~l~~ 100 (524)
.+++-|.++|++ .+..++|.|+.|||||.+.+- .-+ .. +.++++++++++.+.+....+..
T Consensus 11 ~L~~eQ~~~v~~--~~g~~lV~g~aGSGKTt~l~~ri~~ll~~~~~~p~~il~lt~t~~aa~~~~~~~~~ 78 (318)
T d1pjra1 11 HLNKEQQEAVRT--TEGPLLIMAGAGSGKTRVLTHRIAYLMAEKHVAPWNILAITFTNKAAREMRERVQS 78 (318)
T ss_dssp TSCHHHHHHHHC--CSSCEEEEECTTSCHHHHHHHHHHHHHHTTCCCGGGEEEEESSHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHhC--CCCCEEEEecCCccHHHHHHHHHHHHHHcCCCCHHHeEeEeccHHHHHHHHHHHHh
Confidence 588999999986 345699999999999976542 112 22 34799999999999987777655
No 56
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=96.18 E-value=0.024 Score=50.68 Aligned_cols=77 Identities=9% Similarity=0.056 Sum_probs=67.4
Q ss_pred CCccEEEEeCccccHHHHHHHHHh----CCCceEEEcCCCCHHHHHHHHHHHhcCCCcEEEEcccc-cccccCCCccEEE
Q 009843 257 GDTCAIVYCLERTTCDELSAYLSA----GGISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAF-GMGIDRKDVRLVC 331 (524)
Q Consensus 257 ~~~~~IIf~~s~~~~e~l~~~L~~----~g~~~~~~h~~l~~~~R~~~~~~f~~g~~~VlVaT~a~-~~GiD~p~v~~VI 331 (524)
.+.++++.+++.--+.+.++.+++ .|+.+..+|+.++..+|..+.+.+.+|+++|||.|-++ ...+.++++..||
T Consensus 103 ~g~qv~~l~Pt~~La~Q~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~g~~~iviGths~l~~~~~f~~LgLiI 182 (233)
T d2eyqa3 103 NHKQVAVLVPTTLLAQQHYDNFRDRFANWPVRIEMISRFRSAKEQTQILAEVAEGKIDILIGTHKLLQSDVKFKDLGLLI 182 (233)
T ss_dssp TTCEEEEECSSHHHHHHHHHHHHHHSTTTTCCEEEESTTSCHHHHHHHHHHHHTTCCSEEEECTHHHHSCCCCSSEEEEE
T ss_pred cCCceEEEccHHHhHHHHHHHHHHHHhhCCCEEEeccCcccchhHHHHHHHHhCCCCCEEEeehhhhccCCcccccccee
Confidence 567899999999999999988885 47889999999999999999999999999999999764 4468888998887
Q ss_pred Ee
Q 009843 332 HF 333 (524)
Q Consensus 332 ~~ 333 (524)
.=
T Consensus 183 iD 184 (233)
T d2eyqa3 183 VD 184 (233)
T ss_dssp EE
T ss_pred ee
Confidence 43
No 57
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=96.18 E-value=0.032 Score=49.18 Aligned_cols=127 Identities=13% Similarity=0.051 Sum_probs=69.2
Q ss_pred EEEEcCCCChHHHHHH-HHH--hcCCCeEEEeC--cHHHHHHHHHHHHH-HcCCceeEeccCCCHHHHHHHHHHhhcCCC
Q 009843 56 CFCLMPTGGGKSMCYQ-IPA--LAKPGIVLVVS--PLIALMENQVIGLK-EKGIAGEFLSSTQTMQVKTKIYEDLDSGKP 129 (524)
Q Consensus 56 ~lv~apTGsGKTl~~~-lp~--l~~~~~~lvl~--P~~~L~~q~~~~l~-~~gi~~~~~~~~~~~~~~~~~~~~l~~~~~ 129 (524)
+++++|||+|||.+.. +.+ ..++.++.+++ ..|.=+.+|.+.+. .++++.............
T Consensus 14 i~lvGptGvGKTTTiAKLAa~~~~~~~kV~lit~Dt~R~gA~eQL~~~a~~l~i~~~~~~~~~d~~~~------------ 81 (213)
T d1vmaa2 14 IMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAADTFRAAAIEQLKIWGERVGATVISHSEGADPAAV------------ 81 (213)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHTCEEECCSTTCCHHHH------------
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCceEEEeecccccchhHHHHHHhhhcCccccccCCCCcHHHH------------
Confidence 5778999999996532 222 23344444444 35566666666654 356654433322221111
Q ss_pred cccEEEeCcccccChhhHHHHHhhhccCCccEEEEeccccccccCCCCHHHHHHHHHHHHhC-------CCCCEEEEecc
Q 009843 130 SLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYL-------PDVPILALTAT 202 (524)
Q Consensus 130 ~~~ll~~tpe~v~t~~~~~~l~~~~~~~~l~~iViDEaH~i~~~g~~fr~~~~~l~~l~~~~-------~~~~ii~lSAT 202 (524)
..........+..++|+||=|=+.. .-.....++..+.+.. |...++.++||
T Consensus 82 -----------------~~~~~~~~~~~~~d~ilIDTaGr~~----~d~~~~~el~~~~~~~~~~~~~~p~~~~LVl~a~ 140 (213)
T d1vmaa2 82 -----------------AFDAVAHALARNKDVVIIDTAGRLH----TKKNLMEELRKVHRVVKKKIPDAPHETLLVIDAT 140 (213)
T ss_dssp -----------------HHHHHHHHHHTTCSEEEEEECCCCS----CHHHHHHHHHHHHHHGGGTCTTCCSEEEEEEEGG
T ss_pred -----------------HHHHHHHHHHcCCCEEEEecccccc----chHHHHHHHHHHHhhhhhccccccceeEEeeccc
Confidence 0111112222347889999887532 2233345555554432 34458899999
Q ss_pred CChhHHHHHHHHh
Q 009843 203 AAPKVQKDVMESL 215 (524)
Q Consensus 203 ~~~~~~~~i~~~l 215 (524)
........+....
T Consensus 141 ~~~~~~~~~~~~~ 153 (213)
T d1vmaa2 141 TGQNGLVQAKIFK 153 (213)
T ss_dssp GHHHHHHHHHHHH
T ss_pred cCcchhhhhhhhc
Confidence 9887777666554
No 58
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=96.17 E-value=0.014 Score=51.32 Aligned_cols=34 Identities=12% Similarity=0.132 Sum_probs=25.3
Q ss_pred CCCHHHHHHHHHHH----cCC---CEEEEcCCCChHHHHHH
Q 009843 38 QFRDKQLDAIQAVL----SGR---DCFCLMPTGGGKSMCYQ 71 (524)
Q Consensus 38 ~~r~~Q~~~i~~~l----~g~---d~lv~apTGsGKTl~~~ 71 (524)
.+.|||.++++.+. .++ -+++.||.|+|||....
T Consensus 2 ~~yPw~~~~~~~l~~~~~~~~l~h~lLl~Gp~G~GKtt~a~ 42 (207)
T d1a5ta2 2 RWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIY 42 (207)
T ss_dssp CCCGGGHHHHHHHHHHHHTTCCCSEEEEECCTTSCHHHHHH
T ss_pred CCCcccHHHHHHHHHHHHcCCcCeEEEEECCCCCcHHHHHH
Confidence 35689888887654 332 38999999999997654
No 59
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=95.91 E-value=0.12 Score=45.04 Aligned_cols=126 Identities=17% Similarity=0.150 Sum_probs=71.7
Q ss_pred EEEEcCCCChHHHHHH-HHH--hcCCCeEEEeC--cHHHHHHHHHHHHHH-cCCceeEeccCCCHHHHHHHHHHhhcCCC
Q 009843 56 CFCLMPTGGGKSMCYQ-IPA--LAKPGIVLVVS--PLIALMENQVIGLKE-KGIAGEFLSSTQTMQVKTKIYEDLDSGKP 129 (524)
Q Consensus 56 ~lv~apTGsGKTl~~~-lp~--l~~~~~~lvl~--P~~~L~~q~~~~l~~-~gi~~~~~~~~~~~~~~~~~~~~l~~~~~ 129 (524)
+++++|||+|||.+.. |.+ ..++.++.+++ ..|.-+.+|.+.+.+ ++++...............
T Consensus 13 i~lvGp~GvGKTTTiaKLA~~~~~~g~kV~lit~Dt~R~gA~eQL~~~a~~l~v~~~~~~~~~~~~~~~~---------- 82 (207)
T d1ls1a2 13 WFLVGLQGSGKTTTAAKLALYYKGKGRRPLLVAADTQRPAAREQLRLLGEKVGVPVLEVMDGESPESIRR---------- 82 (207)
T ss_dssp EEEECCTTTTHHHHHHHHHHHHHHTTCCEEEEECCSSCHHHHHHHHHHHHHHTCCEEECCTTCCHHHHHH----------
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEecccccchHHHHHHHHHHhcCCccccccccchhhHHHH----------
Confidence 4668999999996532 222 23355566665 366666677666554 5666555443332221110
Q ss_pred cccEEEeCcccccChhhHHHHHhhhccCCccEEEEeccccccccCCCCHHHHHHHHHHHHhCC-CCCEEEEeccCChhHH
Q 009843 130 SLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYLP-DVPILALTATAAPKVQ 208 (524)
Q Consensus 130 ~~~ll~~tpe~v~t~~~~~~l~~~~~~~~l~~iViDEaH~i~~~g~~fr~~~~~l~~l~~~~~-~~~ii~lSAT~~~~~~ 208 (524)
...........++++||=|-+.. .......++..+.+..+ ...++.++||...+..
T Consensus 83 -------------------~~~~~~~~~~~d~vlIDTaGr~~----~d~~~~~el~~~~~~~~~~~~llv~~a~~~~~~~ 139 (207)
T d1ls1a2 83 -------------------RVEEKARLEARDLILVDTAGRLQ----IDEPLMGELARLKEVLGPDEVLLVLDAMTGQEAL 139 (207)
T ss_dssp -------------------HHHHHHHHHTCCEEEEECCCCSS----CCHHHHHHHHHHHHHHCCSEEEEEEEGGGTHHHH
T ss_pred -------------------HHHHHHhhccCcceeecccccch----hhhhhHHHHHHHHhhcCCceEEEEeccccchhHH
Confidence 01111122346789999887642 24455566766666544 3447788898888776
Q ss_pred HHHHHH
Q 009843 209 KDVMES 214 (524)
Q Consensus 209 ~~i~~~ 214 (524)
+.+...
T Consensus 140 ~~~~~f 145 (207)
T d1ls1a2 140 SVARAF 145 (207)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 655543
No 60
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.83 E-value=0.0096 Score=53.79 Aligned_cols=47 Identities=17% Similarity=0.193 Sum_probs=30.1
Q ss_pred cccccCCCCChhHHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCEEEEcCCCChHHHHHH
Q 009843 12 SQTQKNKPLHEKEALVKLLRWHFGHAQFRDKQLDAIQAVLSGRDCFCLMPTGGGKSMCYQ 71 (524)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~l~~~fg~~~~r~~Q~~~i~~~l~g~d~lv~apTGsGKTl~~~ 71 (524)
+....++++..++++.+.|+..+.-.. ....+++.||+|+|||....
T Consensus 5 y~P~~~~diig~~~~~~~L~~~~~~~~-------------~~~~lll~Gp~G~GKTt~~~ 51 (252)
T d1sxje2 5 YRPKSLNALSHNEELTNFLKSLSDQPR-------------DLPHLLLYGPNGTGKKTRCM 51 (252)
T ss_dssp TCCCSGGGCCSCHHHHHHHHTTTTCTT-------------CCCCEEEECSTTSSHHHHHH
T ss_pred cCCCCHHHccCcHHHHHHHHHHHHcCC-------------CCCeEEEECCCCCCHHHHHH
Confidence 333445556667788887776432111 12358999999999997643
No 61
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=95.69 E-value=0.025 Score=50.35 Aligned_cols=52 Identities=19% Similarity=0.124 Sum_probs=36.9
Q ss_pred cccccccccccCCCCChhHHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCEEEEcCCCChHHHHHH
Q 009843 6 LAMQSTSQTQKNKPLHEKEALVKLLRWHFGHAQFRDKQLDAIQAVLSGRDCFCLMPTGGGKSMCYQ 71 (524)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~fg~~~~r~~Q~~~i~~~l~g~d~lv~apTGsGKTl~~~ 71 (524)
.||...+....+.++..++++...|+....- -...++++.||+|+|||....
T Consensus 12 ~~w~~ky~P~~~~diig~~~~~~~l~~~i~~--------------~~~~~lll~Gp~G~GKTtla~ 63 (231)
T d1iqpa2 12 KPWVEKYRPQRLDDIVGQEHIVKRLKHYVKT--------------GSMPHLLFAGPPGVGKTTAAL 63 (231)
T ss_dssp SCHHHHTCCCSTTTCCSCHHHHHHHHHHHHH--------------TCCCEEEEESCTTSSHHHHHH
T ss_pred chHHHHhCCCCHHHccCcHHHHHHHHHHHHc--------------CCCCeEEEECCCCCcHHHHHH
Confidence 5777777777788888778777777763210 012468999999999997653
No 62
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=95.39 E-value=0.071 Score=46.88 Aligned_cols=15 Identities=27% Similarity=0.335 Sum_probs=13.0
Q ss_pred CEEEEcCCCChHHHH
Q 009843 55 DCFCLMPTGGGKSMC 69 (524)
Q Consensus 55 d~lv~apTGsGKTl~ 69 (524)
.+++.+|+|+|||.-
T Consensus 38 ~l~l~G~~G~GKTHL 52 (213)
T d1l8qa2 38 PIFIYGSVGTGKTHL 52 (213)
T ss_dssp SEEEECSSSSSHHHH
T ss_pred cEEEECCCCCcHHHH
Confidence 389999999999953
No 63
>d1c4oa2 c.37.1.19 (A:410-583) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}
Probab=95.18 E-value=0.049 Score=46.24 Aligned_cols=84 Identities=23% Similarity=0.179 Sum_probs=67.1
Q ss_pred HhcCCCeEEEeCcHHHHHHHHHHHHHHcCCceeEeccCCCHHHHHHHHHHhhcCCCcccEEEeCcccccChhhHHHHHhh
Q 009843 74 ALAKPGIVLVVSPLIALMENQVIGLKEKGIAGEFLSSTQTMQVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKI 153 (524)
Q Consensus 74 ~l~~~~~~lvl~P~~~L~~q~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ll~~tpe~v~t~~~~~~l~~~ 153 (524)
...++.++||.|+++.-++.....|.+.|+++..+++..+..++..+..++..++ ++++++|.. ...|
T Consensus 27 ~~~~g~r~lvfc~t~~~~~~l~~~L~~~Gi~a~~~Hg~~~~~eR~~~l~~F~~G~--~~vLVaT~v--~~~G-------- 94 (174)
T d1c4oa2 27 RAARGERTLVTVLTVRMAEELTSFLVEHGIRARYLHHELDAFKRQALIRDLRLGH--YDCLVGINL--LREG-------- 94 (174)
T ss_dssp HHHTTCEEEEECSSHHHHHHHHHHHHHTTCCEEEECTTCCHHHHHHHHHHHHTTS--CSEEEESCC--CCTT--------
T ss_pred HHhcCCcEEEEEcchhHHHHHHHHHHhcCCceEEEecccchHHHHHHHHHHHCCC--eEEEEeeee--eeee--------
Confidence 3456889999999999999999999999999999999999999999999999987 778877753 2222
Q ss_pred hccCCccEEEEecccc
Q 009843 154 HSRGLLNLVAIDEAHC 169 (524)
Q Consensus 154 ~~~~~l~~iViDEaH~ 169 (524)
.+...++++|+=.++.
T Consensus 95 iDip~V~~Vi~~~~~~ 110 (174)
T d1c4oa2 95 LDIPEVSLVAILDADK 110 (174)
T ss_dssp CCCTTEEEEEETTTTS
T ss_pred ccCCCCcEEEEecccc
Confidence 2233466777655544
No 64
>d1t5la1 c.37.1.19 (A:2-414) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=95.08 E-value=0.012 Score=57.47 Aligned_cols=63 Identities=24% Similarity=0.172 Sum_probs=47.3
Q ss_pred CCHHHHHHHHHHHc----C-CCEEEEcCCCChHHHHHHHHHhcCCCeEEEeCcHHHHHHHHHHHHHHc
Q 009843 39 FRDKQLDAIQAVLS----G-RDCFCLMPTGGGKSMCYQIPALAKPGIVLVVSPLIALMENQVIGLKEK 101 (524)
Q Consensus 39 ~r~~Q~~~i~~~l~----g-~d~lv~apTGsGKTl~~~lp~l~~~~~~lvl~P~~~L~~q~~~~l~~~ 101 (524)
|..-|=+||+.+.+ | ++.++.+-||||||+...--+-..++.+|||+|...++.+..+.|+.+
T Consensus 12 p~gDQP~aI~~l~~~l~~g~~~q~l~GltGS~ka~~iA~l~~~~~rp~LVVt~n~~~A~qL~~dL~~~ 79 (413)
T d1t5la1 12 PQGDQPQAIAKLVDGLRRGVKHQTLLGATGTGKTFTISNVIAQVNKPTLVIAHNKTLAGQLYSELKEF 79 (413)
T ss_dssp CCTTHHHHHHHHHHHHHHTCSEEEEEECTTSCHHHHHHHHHHHHTCCEEEECSSHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHhcCCCcEEEeCCCCcHHHHHHHHHHHHhCCCEEEEeCCHHHHHHHHHHHHHH
Confidence 44557666666554 4 568899999999997543222233678999999999999999999885
No 65
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=95.01 E-value=0.029 Score=50.36 Aligned_cols=46 Identities=22% Similarity=0.271 Sum_probs=28.5
Q ss_pred CccEEEEeccccccccCCCCHHHHHHHHHHHHhCCCCCEEEEeccCChhHHH
Q 009843 158 LLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQK 209 (524)
Q Consensus 158 ~l~~iViDEaH~i~~~g~~fr~~~~~l~~l~~~~~~~~ii~lSAT~~~~~~~ 209 (524)
...++||||+|.+...+ ...|..+.+..++...++++++-.+.+..
T Consensus 115 ~~kviiIde~d~l~~~~------q~~Llk~lE~~~~~~~~il~tn~~~~i~~ 160 (239)
T d1njfa_ 115 RFKVYLIDEVHMLSRHS------FNALLKTLEEPPEHVKFLLATTDPQKLPV 160 (239)
T ss_dssp SSEEEEEETGGGSCHHH------HHHHHHHHHSCCTTEEEEEEESCGGGSCH
T ss_pred CCEEEEEECcccCCHHH------HHHHHHHHhcCCCCeEEEEEcCCccccCh
Confidence 46699999999986422 23455555555555566666665444433
No 66
>g1qhh.1 c.37.1.19 (A:,B:,C:,D:) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=94.44 E-value=0.021 Score=58.69 Aligned_cols=62 Identities=15% Similarity=0.207 Sum_probs=47.5
Q ss_pred CCCCHHHHHHHHHHHcCCCEEEEcCCCChHHHHHHHHH---hcC----CCeEEEeCcHHHHHHHHHHHHHH
Q 009843 37 AQFRDKQLDAIQAVLSGRDCFCLMPTGGGKSMCYQIPA---LAK----PGIVLVVSPLIALMENQVIGLKE 100 (524)
Q Consensus 37 ~~~r~~Q~~~i~~~l~g~d~lv~apTGsGKTl~~~lp~---l~~----~~~~lvl~P~~~L~~q~~~~l~~ 100 (524)
..+++-|+++|.. ....++|+|..|||||.+.+--+ +.. ...+++|+.|+..+.+..+++..
T Consensus 10 ~~L~~eQ~~~v~~--~~~~~lV~A~AGSGKT~~lv~ri~~ll~~~~~~p~~Il~ltft~~Aa~ei~~Ri~~ 78 (623)
T g1qhh.1 10 AHLNKEQQEAVRT--TEGPLLIMAGAGSGKTRVLTHRIAYLMAEKHVAPWNILAITFTNKAAREMRERVQS 78 (623)
T ss_dssp TTSCHHHHHHHHC--CSSCEEEEECTTSCHHHHHHHHHHHHHHTTCCCGGGEEEEESSHHHHHHHHHHHHH
T ss_pred HhcCHHHHHHHcC--CCCCEEEEEeCchHHHHHHHHHHHHHHHcCCCCcccEEEEeccHHHHHHHHHHHHH
Confidence 5789999999973 45679999999999997754221 122 34799999999998888877765
No 67
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=94.37 E-value=0.057 Score=48.74 Aligned_cols=67 Identities=13% Similarity=0.047 Sum_probs=34.5
Q ss_pred cCCCCChhHHHHHHHHHHcCCCCCCHHHHHHHHHHH--cCCCEEEEcCCCChHHHHHHHHHhcCCCeEEEeCc
Q 009843 16 KNKPLHEKEALVKLLRWHFGHAQFRDKQLDAIQAVL--SGRDCFCLMPTGGGKSMCYQIPALAKPGIVLVVSP 86 (524)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~fg~~~~r~~Q~~~i~~~l--~g~d~lv~apTGsGKTl~~~lp~l~~~~~~lvl~P 86 (524)
.|.++...+++.+.|++...+ ++ +.+.+...- ..+.+++.+|+|+|||+..-.-+-..+-..+.+.+
T Consensus 7 ~~~di~G~~~~k~~l~~~i~~--l~--~~~~~~~~g~~~~~giLl~GppGtGKT~la~aia~~~~~~~~~i~~ 75 (247)
T d1ixza_ 7 TFKDVAGAEEAKEELKEIVEF--LK--NPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGEARVPFITASG 75 (247)
T ss_dssp CGGGCCSCHHHHHHHHHHHHH--HH--CHHHHHHTTCCCCSEEEEECCTTSSHHHHHHHHHHHTTCCEEEEEH
T ss_pred cHHHHccHHHHHHHHHHHHHH--HH--CHHHHHHcCCCCCceEEEecCCCCChhHHHHHHHHHcCCCEEEEEh
Confidence 455566566666666553211 00 111122211 12469999999999997654333333444444443
No 68
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=94.28 E-value=0.4 Score=41.68 Aligned_cols=129 Identities=12% Similarity=0.041 Sum_probs=60.8
Q ss_pred EEEEcCCCChHHHHHH-HHH--hcCCCeEEEeC--cHHHHHHHHHHHHHH-cCCceeEeccCCCHHHHHHHHHHhhcCCC
Q 009843 56 CFCLMPTGGGKSMCYQ-IPA--LAKPGIVLVVS--PLIALMENQVIGLKE-KGIAGEFLSSTQTMQVKTKIYEDLDSGKP 129 (524)
Q Consensus 56 ~lv~apTGsGKTl~~~-lp~--l~~~~~~lvl~--P~~~L~~q~~~~l~~-~gi~~~~~~~~~~~~~~~~~~~~l~~~~~ 129 (524)
+++++|||+|||.+.. |.+ ..++.++.+++ ..|.=+.+|.+.+.+ +|++.............
T Consensus 15 i~lvGptGvGKTTTiAKLA~~~~~~g~kV~lit~Dt~R~ga~eQL~~~a~~l~v~~~~~~~~~~~~~~------------ 82 (211)
T d1j8yf2 15 IMLVGVQGTGKATTAGKLAYFYKKKGFKVGLVGADVYRPAALEQLQQLGQQIGVPVYGEPGEKDVVGI------------ 82 (211)
T ss_dssp EEEECSCCC----HHHHHHHHHHHTTCCEEEEECCCSSHHHHHHHHHHHHHHTCCEECCTTCCCHHHH------------
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCceEEEEeeccccchhHHHHHhccccCcceeecccchhhhHH------------
Confidence 5668999999996532 222 12344444444 245555555555443 56554433332221110
Q ss_pred cccEEEeCcccccChhhHHHHHhhhccCCccEEEEeccccccccCCCCHHHHHHHHHHHHhCC-CCCEEEEeccCChhHH
Q 009843 130 SLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYLP-DVPILALTATAAPKVQ 208 (524)
Q Consensus 130 ~~~ll~~tpe~v~t~~~~~~l~~~~~~~~l~~iViDEaH~i~~~g~~fr~~~~~l~~l~~~~~-~~~ii~lSAT~~~~~~ 208 (524)
..+-.........++|+||=+=+. ... +......++..+..... ...++.++||...+..
T Consensus 83 -----------------~~~a~~~~~~~~~d~IlIDTaGr~-~~~-~~~~~~~el~~~~~~~~~~~~~LVl~a~~~~~~~ 143 (211)
T d1j8yf2 83 -----------------AKRGVEKFLSEKMEIIIVDTAGRH-GYG-EEAALLEEMKNIYEAIKPDEVTLVIDASIGQKAY 143 (211)
T ss_dssp -----------------HHHHHHHHHHTTCSEEEEECCCSC-CTT-CHHHHHHHHHHHHHHHCCSEEEEEEEGGGGGGHH
T ss_pred -----------------HHHHHHHhhccCCceEEEecCCcC-ccc-hhhHHHHHHHHHHhhcCCceEEEEEecccCcchH
Confidence 000001111234788999977542 111 11122345555555543 3457888999887766
Q ss_pred HHHHHHh
Q 009843 209 KDVMESL 215 (524)
Q Consensus 209 ~~i~~~l 215 (524)
..+....
T Consensus 144 ~~~~~~~ 150 (211)
T d1j8yf2 144 DLASKFN 150 (211)
T ss_dssp HHHHHHH
T ss_pred HHHhhhh
Confidence 6555543
No 69
>d2eyqa5 c.37.1.19 (A:779-989) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=94.13 E-value=0.17 Score=43.96 Aligned_cols=102 Identities=13% Similarity=0.115 Sum_probs=80.8
Q ss_pred HHHHHhcCCCeEEEeCcHHHHHHHHHHHHHH--cCCceeEeccCCCHHHHHHHHHHhhcCCCcccEEEeCcccccChhhH
Q 009843 70 YQIPALAKPGIVLVVSPLIALMENQVIGLKE--KGIAGEFLSSTQTMQVKTKIYEDLDSGKPSLRLLYVTPELTATPGFM 147 (524)
Q Consensus 70 ~~lp~l~~~~~~lvl~P~~~L~~q~~~~l~~--~gi~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ll~~tpe~v~t~~~~ 147 (524)
++.-.+.+++.+.||+|.++-++...+.+++ .+.+...+++.+...++..+..+...++ +++|++|..+=.
T Consensus 23 ~I~~El~rGgQvy~V~p~I~~~e~~~~~l~~~~p~~~i~~lHGkm~~~eke~im~~F~~g~--~~ILv~TtvIEv----- 95 (211)
T d2eyqa5 23 AILREILRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMRERELERVMNDFHHQR--FNVLVCTTIIET----- 95 (211)
T ss_dssp HHHHHHTTTCEEEEECCCSSCHHHHHHHHHHHCTTSCEEECCSSCCHHHHHHHHHHHHTTS--CCEEEESSTTGG-----
T ss_pred HHHHHHHcCCeEEEEEcCccchhhHHHHHHHhCCceEEEEEEeccCHHHHHHHHHHHHcCC--cceEEEehhhhh-----
Confidence 3455677899999999999888888888887 3678899999999999999999999987 889988875421
Q ss_pred HHHHhhhccCCccEEEEeccccccccCCCCHHHHHHHHHHHHhCC
Q 009843 148 SKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYLP 192 (524)
Q Consensus 148 ~~l~~~~~~~~l~~iViDEaH~i~~~g~~fr~~~~~l~~l~~~~~ 192 (524)
-.+..+..++||..|+.+. ..+|..++.+..
T Consensus 96 -----GiDvpnA~~iiI~~a~rfG---------LaQLhQLRGRVG 126 (211)
T d2eyqa5 96 -----GIDIPTANTIIIERADHFG---------LAQLHQLRGRVG 126 (211)
T ss_dssp -----GSCCTTEEEEEETTTTSSC---------HHHHHHHHTTCC
T ss_pred -----ccCCCCCcEEEEecchhcc---------ccccccccceee
Confidence 1223347789999999853 367888887765
No 70
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]}
Probab=93.83 E-value=0.099 Score=47.57 Aligned_cols=35 Identities=23% Similarity=0.077 Sum_probs=23.6
Q ss_pred cCCCEEEEcCCCChHHHH-HHHH---HhcCCCeEEEeCc
Q 009843 52 SGRDCFCLMPTGGGKSMC-YQIP---ALAKPGIVLVVSP 86 (524)
Q Consensus 52 ~g~d~lv~apTGsGKTl~-~~lp---~l~~~~~~lvl~P 86 (524)
.|.=+++.|+||+|||.. .++. +...+..+++++.
T Consensus 34 ~G~l~vi~G~~G~GKT~~~~~la~~~a~~~g~~v~~~s~ 72 (277)
T d1cr2a_ 34 GGEVIMVTSGSGMGKSTFVRQQALQWGTAMGKKVGLAML 72 (277)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHHHHHHHTSCCCEEEEES
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHhhhhhcccceeEeee
Confidence 455678889999999943 3333 2234667888874
No 71
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=93.83 E-value=0.055 Score=48.79 Aligned_cols=17 Identities=18% Similarity=0.126 Sum_probs=14.6
Q ss_pred CCEEEEcCCCChHHHHH
Q 009843 54 RDCFCLMPTGGGKSMCY 70 (524)
Q Consensus 54 ~d~lv~apTGsGKTl~~ 70 (524)
+.+|+.+|+|+|||...
T Consensus 41 ~~vLL~GppGtGKT~la 57 (246)
T d1d2na_ 41 VSVLLEGPPHSGKTALA 57 (246)
T ss_dssp EEEEEECSTTSSHHHHH
T ss_pred eEEEEECcCCCCHHHHH
Confidence 35899999999999764
No 72
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=93.54 E-value=0.32 Score=43.60 Aligned_cols=35 Identities=17% Similarity=0.048 Sum_probs=20.1
Q ss_pred cCCccEEEEeccccccccCCCCHHHHHHHHHHHHh
Q 009843 156 RGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 190 (524)
Q Consensus 156 ~~~l~~iViDEaH~i~~~g~~fr~~~~~l~~l~~~ 190 (524)
.+....+++||+|.+..-...-......+..+...
T Consensus 130 ~~~~~~~iide~d~l~~~~~~~~~~~~~l~~l~~~ 164 (287)
T d1w5sa2 130 ENHYLLVILDEFQSMLSSPRIAAEDLYTLLRVHEE 164 (287)
T ss_dssp HTCEEEEEEESTHHHHSCTTSCHHHHHHHHTHHHH
T ss_pred ccCccccceeEEEEeccccccchhHHHHHHHHHHh
Confidence 34466789999999865333333333444444443
No 73
>d1t5la2 c.37.1.19 (A:415-595) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=93.04 E-value=0.2 Score=42.56 Aligned_cols=83 Identities=28% Similarity=0.246 Sum_probs=67.9
Q ss_pred hcCCCeEEEeCcHHHHHHHHHHHHHHcCCceeEeccCCCHHHHHHHHHHhhcCCCcccEEEeCcccccChhhHHHHHhhh
Q 009843 75 LAKPGIVLVVSPLIALMENQVIGLKEKGIAGEFLSSTQTMQVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIH 154 (524)
Q Consensus 75 l~~~~~~lvl~P~~~L~~q~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ll~~tpe~v~t~~~~~~l~~~~ 154 (524)
+.++.+++|.++++.-++.....|+..|+++..+++..+..++.....++..+. +++|++|... ..| .
T Consensus 28 ~~~~~~~iif~~~~~~~~~~~~~l~~~g~~~~~~hg~~~~~eR~~~l~~Fr~g~--~~vLVaTdv~--~rG--------i 95 (181)
T d1t5la2 28 VERNERTLVTTLTKKMAEDLTDYLKEAGIKVAYLHSEIKTLERIEIIRDLRLGK--YDVLVGINLL--REG--------L 95 (181)
T ss_dssp HHTTCEEEEECSSHHHHHHHHHHHHTTTCCEEEECSSCCHHHHHHHHHHHHHTS--CSEEEESCCC--SSS--------C
T ss_pred HhcCCeEEEEeehhhhhHHHHHHHHhCCcceeEecCCccHHHHHHHHHHHHCCC--CCEEEehhHH--Hcc--------C
Confidence 346789999999999999999999999999999999999999999999999997 8888888532 222 2
Q ss_pred ccCCccEEEEecccc
Q 009843 155 SRGLLNLVAIDEAHC 169 (524)
Q Consensus 155 ~~~~l~~iViDEaH~ 169 (524)
+...+++||.-++..
T Consensus 96 Dip~v~~VI~~d~p~ 110 (181)
T d1t5la2 96 DIPEVSLVAILDADK 110 (181)
T ss_dssp CCTTEEEEEETTTTS
T ss_pred CCCCCCEEEEecCCc
Confidence 233477888776664
No 74
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]}
Probab=92.73 E-value=0.72 Score=39.49 Aligned_cols=28 Identities=7% Similarity=-0.034 Sum_probs=21.5
Q ss_pred HHHHHHHHHcC---CCEEEEcCCCChHHHHH
Q 009843 43 QLDAIQAVLSG---RDCFCLMPTGGGKSMCY 70 (524)
Q Consensus 43 Q~~~i~~~l~g---~d~lv~apTGsGKTl~~ 70 (524)
|.+.+..+.+. ..+++.+|.|+|||...
T Consensus 2 ~~~~l~~~i~~~~~~~~l~~G~~g~gk~~~a 32 (198)
T d2gnoa2 2 QLETLKRIIEKSEGISILINGEDLSYPREVS 32 (198)
T ss_dssp HHHHHHHHHHTCSSEEEEEECSSSSHHHHHH
T ss_pred HHHHHHHHHhcCCCceEEEECCCCCCHHHHH
Confidence 66677776653 46899999999999654
No 75
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=92.43 E-value=0.12 Score=46.79 Aligned_cols=53 Identities=9% Similarity=-0.051 Sum_probs=28.2
Q ss_pred ccCCCCChhHHHHHHHHHHcC-CCCCCHHHHHHHHHHHcCCCEEEEcCCCChHHHHH
Q 009843 15 QKNKPLHEKEALVKLLRWHFG-HAQFRDKQLDAIQAVLSGRDCFCLMPTGGGKSMCY 70 (524)
Q Consensus 15 ~~~~~~~~~~~~~~~l~~~fg-~~~~r~~Q~~~i~~~l~g~d~lv~apTGsGKTl~~ 70 (524)
..|.++...++..+.|.+... +..+..+|.-. .-..+.+++.+|+|+|||+..
T Consensus 9 ~t~~Di~Gl~~~k~~l~e~v~~~~~~~~~~~~g---~~~~~~iLL~GppGtGKT~la 62 (256)
T d1lv7a_ 9 TTFADVAGCDEAKEEVAELVEYLREPSRFQKLG---GKIPKGVLMVGPPGTGKTLLA 62 (256)
T ss_dssp CCGGGSCSCHHHHHHTHHHHHHHHCGGGC--------CCCCEEEEECCTTSCHHHHH
T ss_pred CCHHHHhchHHHHHHHHHHHHHHHCHHHHHHcC---CCCCCeEEeeCCCCCCccHHH
Confidence 445666666666666654211 11111122111 112367999999999999764
No 76
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=92.25 E-value=0.24 Score=44.57 Aligned_cols=33 Identities=18% Similarity=0.297 Sum_probs=21.4
Q ss_pred CCEEEEcCCCChHHHHHHHHHhcCCCeEEEeCc
Q 009843 54 RDCFCLMPTGGGKSMCYQIPALAKPGIVLVVSP 86 (524)
Q Consensus 54 ~d~lv~apTGsGKTl~~~lp~l~~~~~~lvl~P 86 (524)
+.+++.+|+|+|||+..-.-+-..+...+.+.+
T Consensus 39 ~giLL~GppGtGKT~l~~ala~~~~~~~~~i~~ 71 (258)
T d1e32a2 39 RGILLYGPPGTGKTLIARAVANETGAFFFLING 71 (258)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHTTCEEEEECH
T ss_pred ceeEEecCCCCCchHHHHHHHHHhCCeEEEEEc
Confidence 569999999999997643333333444444443
No 77
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=92.23 E-value=0.3 Score=43.35 Aligned_cols=45 Identities=11% Similarity=0.117 Sum_probs=26.8
Q ss_pred CccEEEEeccccccccCCCCHHHHHHHHHHHHhCCCCCEEEEeccCChh
Q 009843 158 LLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPK 206 (524)
Q Consensus 158 ~l~~iViDEaH~i~~~g~~fr~~~~~l~~l~~~~~~~~ii~lSAT~~~~ 206 (524)
...++++||++.+......+. ..+..+... ...++++.++|....
T Consensus 123 ~~~vi~ide~~~~~~~~~~~~---~~~~~~~~~-~~~~ii~i~~~~~~~ 167 (253)
T d1sxja2 123 KHFVIIMDEVDGMSGGDRGGV---GQLAQFCRK-TSTPLILICNERNLP 167 (253)
T ss_dssp TSEEEEECSGGGCCTTSTTHH---HHHHHHHHH-CSSCEEEEESCTTSS
T ss_pred cceEEEeeeccccccchhhhh---HHHhhhhcc-ccccccccccccccc
Confidence 466899999999876543322 233332222 356777777665443
No 78
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=91.52 E-value=0.11 Score=48.30 Aligned_cols=19 Identities=26% Similarity=0.413 Sum_probs=16.2
Q ss_pred CCCEEEEcCCCChHHHHHH
Q 009843 53 GRDCFCLMPTGGGKSMCYQ 71 (524)
Q Consensus 53 g~d~lv~apTGsGKTl~~~ 71 (524)
.+.+++.+|||+|||+.+-
T Consensus 49 ~~~iLl~GPpG~GKT~lAk 67 (309)
T d1ofha_ 49 PKNILMIGPTGVGKTEIAR 67 (309)
T ss_dssp CCCEEEECCTTSSHHHHHH
T ss_pred CceEEEECCCCCCHHHHHH
Confidence 4789999999999997653
No 79
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=91.40 E-value=0.87 Score=40.98 Aligned_cols=16 Identities=19% Similarity=0.252 Sum_probs=14.1
Q ss_pred CCEEEEcCCCChHHHH
Q 009843 54 RDCFCLMPTGGGKSMC 69 (524)
Q Consensus 54 ~d~lv~apTGsGKTl~ 69 (524)
.++++++|.|.|||..
T Consensus 40 ~n~lLVG~~GvGKTal 55 (268)
T d1r6bx2 40 NNPLLVGESGVGKTAI 55 (268)
T ss_dssp CEEEEECCTTSSHHHH
T ss_pred CCcEEECCCCCcHHHH
Confidence 5799999999999954
No 80
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=90.66 E-value=0.34 Score=43.73 Aligned_cols=32 Identities=16% Similarity=0.215 Sum_probs=20.8
Q ss_pred CCEEEEcCCCChHHHHHHHHHhcCCCeEEEeC
Q 009843 54 RDCFCLMPTGGGKSMCYQIPALAKPGIVLVVS 85 (524)
Q Consensus 54 ~d~lv~apTGsGKTl~~~lp~l~~~~~~lvl~ 85 (524)
+.+++.+|+|+|||...-.-+-..+-..+.+.
T Consensus 42 ~giLL~Gp~GtGKT~l~~ala~~~~~~~~~~~ 73 (265)
T d1r7ra3 42 KGVLFYGPPGCGKTLLAKAIANECQANFISIK 73 (265)
T ss_dssp CEEEEBCCTTSSHHHHHHHHHHHTTCEEEEEC
T ss_pred CeEEEECCCCCcchhHHHHHHHHhCCcEEEEE
Confidence 56999999999999764333333344444444
No 81
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=90.22 E-value=0.9 Score=39.64 Aligned_cols=102 Identities=14% Similarity=0.079 Sum_probs=52.5
Q ss_pred CCCEEEEcCCCChHHHHH-HHH--HhcCCCeEEEeCcHHHHHHHHHHHHHHcCCceeEeccCCCHHHHHHHHHHhhcCCC
Q 009843 53 GRDCFCLMPTGGGKSMCY-QIP--ALAKPGIVLVVSPLIALMENQVIGLKEKGIAGEFLSSTQTMQVKTKIYEDLDSGKP 129 (524)
Q Consensus 53 g~d~lv~apTGsGKTl~~-~lp--~l~~~~~~lvl~P~~~L~~q~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~l~~~~~ 129 (524)
|.-+++.+|+|+|||... ++. ++..+..+++++-... ..+..+.+..++... .. ....+.
T Consensus 26 gsl~li~G~pGsGKT~l~~qia~~~~~~~~~~~~is~e~~-~~~~~~~~~~~~~~~---------~~------~~~~~~- 88 (242)
T d1tf7a2 26 DSIILATGATGTGKTLLVSRFVENACANKERAILFAYEES-RAQLLRNAYSWGMDF---------EE------MERQNL- 88 (242)
T ss_dssp SCEEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEESSSC-HHHHHHHHHTTSCCH---------HH------HHHTTS-
T ss_pred CeEEEEEeCCCCCHHHHHHHHHHHHHHhccccceeeccCC-HHHHHHHHHHcCCCh---------HH------HhhcCc-
Confidence 356789999999999543 332 3344667777763211 122333444443221 00 011111
Q ss_pred cccEEEeCcccccChhhHHHHHhhhccCCccEEEEeccccccc
Q 009843 130 SLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISS 172 (524)
Q Consensus 130 ~~~ll~~tpe~v~t~~~~~~l~~~~~~~~l~~iViDEaH~i~~ 172 (524)
..+....++...-...+..+.........+++|||-++.+..
T Consensus 89 -~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~vviDs~~~~~~ 130 (242)
T d1tf7a2 89 -LKIVCAYPESAGLEDHLQIIKSEINDFKPARIAIDSLSALAR 130 (242)
T ss_dssp -EEECCCCGGGSCHHHHHHHHHHHHHTTCCSEEEEECHHHHTS
T ss_pred -eEEEEeecchhhHHHHHHHHHHHHHhcCCceeeeecchhhhc
Confidence 212212222222223445555555566789999999988754
No 82
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=90.01 E-value=0.14 Score=48.85 Aligned_cols=17 Identities=29% Similarity=0.565 Sum_probs=15.1
Q ss_pred CCEEEEcCCCChHHHHH
Q 009843 54 RDCFCLMPTGGGKSMCY 70 (524)
Q Consensus 54 ~d~lv~apTGsGKTl~~ 70 (524)
.++|..+|||.|||..+
T Consensus 69 ~niLfiGPTGvGKTElA 85 (364)
T d1um8a_ 69 SNILLIGPTGSGKTLMA 85 (364)
T ss_dssp CCEEEECCTTSSHHHHH
T ss_pred cceeeeCCCCccHHHHH
Confidence 57999999999999765
No 83
>d1c4oa1 c.37.1.19 (A:2-409) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}
Probab=89.62 E-value=0.2 Score=48.50 Aligned_cols=64 Identities=23% Similarity=0.221 Sum_probs=46.2
Q ss_pred CCCHHHHHHHHHHH----cCCC-EEEEcCCCChHHHHHHHHHhcCCCeEEEeCcHHHHHHHHHHHHHHc
Q 009843 38 QFRDKQLDAIQAVL----SGRD-CFCLMPTGGGKSMCYQIPALAKPGIVLVVSPLIALMENQVIGLKEK 101 (524)
Q Consensus 38 ~~r~~Q~~~i~~~l----~g~d-~lv~apTGsGKTl~~~lp~l~~~~~~lvl~P~~~L~~q~~~~l~~~ 101 (524)
+|+.-|-+||+.+. +|+. ..+.+.+||+|+++..--+-..+..+|||+|....+.+..+.|+.+
T Consensus 8 ~p~~dqp~aI~~l~~~L~~g~~~~~L~GlsgS~ka~~~A~l~~~~~rp~LvVt~~~~~A~~l~~dL~~~ 76 (408)
T d1c4oa1 8 SPKGDQPKAIAGLVEALRDGERFVTLLGATGTGKTVTMAKVIEALGRPALVLAPNKILAAQLAAEFREL 76 (408)
T ss_dssp CCCTTHHHHHHHHHHHHHTTCSEEEEEECTTSCHHHHHHHHHHHHTCCEEEEESSHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHHHHhCCCEEEEeCCHHHHHHHHHHHHHh
Confidence 45556767776654 4444 6888999999996532212223567899999999999999999875
No 84
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=88.80 E-value=0.24 Score=47.76 Aligned_cols=31 Identities=23% Similarity=0.368 Sum_probs=24.8
Q ss_pred CCHHHHHHHHHHHcCCC--EEEEcCCCChHHHH
Q 009843 39 FRDKQLDAIQAVLSGRD--CFCLMPTGGGKSMC 69 (524)
Q Consensus 39 ~r~~Q~~~i~~~l~g~d--~lv~apTGsGKTl~ 69 (524)
+.+.|.+.+..++.... +++.+|||||||.+
T Consensus 142 ~~~~~~~~l~~l~~~~~GliLvtGpTGSGKSTT 174 (401)
T d1p9ra_ 142 MTAHNHDNFRRLIKRPHGIILVTGPTGSGKSTT 174 (401)
T ss_dssp CCHHHHHHHHHHHTSSSEEEEEECSTTSCHHHH
T ss_pred ccHHHHHHHHHHHhhhhceEEEEcCCCCCccHH
Confidence 56788888888876544 68889999999965
No 85
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}
Probab=88.75 E-value=0.2 Score=46.92 Aligned_cols=52 Identities=15% Similarity=0.298 Sum_probs=32.1
Q ss_pred CCHHHHHHHHH-HHcCCCEEEEcCCCChHHHHH--HHHHhcCCCeEEEeCcHHHH
Q 009843 39 FRDKQLDAIQA-VLSGRDCFCLMPTGGGKSMCY--QIPALAKPGIVLVVSPLIAL 90 (524)
Q Consensus 39 ~r~~Q~~~i~~-~l~g~d~lv~apTGsGKTl~~--~lp~l~~~~~~lvl~P~~~L 90 (524)
+.+.+.+.+.. +..++++++.+|||||||... ++..+....+++.+--+.+|
T Consensus 151 ~~~~~~~~l~~~v~~~~nili~G~tgSGKTT~l~al~~~i~~~~rivtiEd~~El 205 (323)
T d1g6oa_ 151 NKEQAISAIKDGIAIGKNVIVCGGTGSGKTTYIKSIMEFIPKEERIISIEDTEEI 205 (323)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEEESTTSSHHHHHHHHGGGSCTTCCEEEEESSCCC
T ss_pred cHHHHHHHHHHHHHhCCCEEEEeeccccchHHHHHHhhhcccccceeeccchhhh
Confidence 34555555555 445789999999999999542 12122235567776555554
No 86
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=88.45 E-value=1.5 Score=37.23 Aligned_cols=17 Identities=18% Similarity=0.170 Sum_probs=14.6
Q ss_pred CCEEEEcCCCChHHHHH
Q 009843 54 RDCFCLMPTGGGKSMCY 70 (524)
Q Consensus 54 ~d~lv~apTGsGKTl~~ 70 (524)
.++++++|+|.|||...
T Consensus 44 ~n~lLvG~pGVGKTalv 60 (195)
T d1jbka_ 44 NNPVLIGEPGVGKTAIV 60 (195)
T ss_dssp CEEEEECCTTSCHHHHH
T ss_pred CCeEEEecCCcccHHHH
Confidence 47999999999999643
No 87
>d1t5ia_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.23 E-value=0.73 Score=38.28 Aligned_cols=61 Identities=11% Similarity=0.053 Sum_probs=53.5
Q ss_pred CCCeEEEeCcHHHHHHHHHHHHHHcCCceeEeccCCCHHHHHHHHHHhhcCCCcccEEEeCcc
Q 009843 77 KPGIVLVVSPLIALMENQVIGLKEKGIAGEFLSSTQTMQVKTKIYEDLDSGKPSLRLLYVTPE 139 (524)
Q Consensus 77 ~~~~~lvl~P~~~L~~q~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ll~~tpe 139 (524)
..+++||.++++.-++...+.|.+.|+++..+++..+..++.........+. .+++++|..
T Consensus 26 ~~~k~iIF~~~~~~~~~l~~~L~~~~~~~~~ihg~~~~~~r~~~l~~F~~g~--~~iLv~T~~ 86 (168)
T d1t5ia_ 26 EFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQ--RRILVATNL 86 (168)
T ss_dssp CCSSEEEECSSHHHHHHHHHHHHHTTCCEEEECTTSCHHHHHHHHHHHHTTS--CSEEEESSC
T ss_pred CCCeEEEEEeeeecchhhhhhhccccccccccccccchhhhhhhhhhhcccc--ceeeecccc
Confidence 4578999999999999988999999999999999999999999999998876 677777754
No 88
>d1hv8a2 c.37.1.19 (A:211-365) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=87.49 E-value=0.94 Score=36.89 Aligned_cols=59 Identities=15% Similarity=0.123 Sum_probs=52.1
Q ss_pred CCeEEEeCcHHHHHHHHHHHHHHcCCceeEeccCCCHHHHHHHHHHhhcCCCcccEEEeCc
Q 009843 78 PGIVLVVSPLIALMENQVIGLKEKGIAGEFLSSTQTMQVKTKIYEDLDSGKPSLRLLYVTP 138 (524)
Q Consensus 78 ~~~~lvl~P~~~L~~q~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ll~~tp 138 (524)
++++||.++++.-+++....|+..|+.+..+++.....++......+..+. .+++++|.
T Consensus 28 ~~k~IIF~~s~~~~~~l~~~L~~~g~~~~~~~~~~~~~~r~~~~~~f~~~~--~~ilv~T~ 86 (155)
T d1hv8a2 28 EFYGLVFCKTKRDTKELASMLRDIGFKAGAIHGDLSQSQREKVIRLFKQKK--IRILIATD 86 (155)
T ss_dssp TCCEEEECSSHHHHHHHHHHHHHTTCCEEEECSSSCHHHHHHHHHHHHTTS--SSEEEECT
T ss_pred CCCEEEEECchHHHHHHHhhhcccccccccccccchhhhhhhhhhhhhccc--ceeeeehh
Confidence 568999999999999999999999999999999999999999999998886 66666654
No 89
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=87.28 E-value=0.23 Score=48.59 Aligned_cols=19 Identities=26% Similarity=0.413 Sum_probs=16.6
Q ss_pred CCCEEEEcCCCChHHHHHH
Q 009843 53 GRDCFCLMPTGGGKSMCYQ 71 (524)
Q Consensus 53 g~d~lv~apTGsGKTl~~~ 71 (524)
.+++|+++|||+|||+.+.
T Consensus 49 ksNILliGPTGvGKTlLAr 67 (443)
T d1g41a_ 49 PKNILMIGPTGVGKTEIAR 67 (443)
T ss_dssp CCCEEEECCTTSSHHHHHH
T ss_pred cccEEEECCCCCCHHHHHH
Confidence 4689999999999998765
No 90
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=87.02 E-value=0.17 Score=45.22 Aligned_cols=17 Identities=24% Similarity=0.260 Sum_probs=14.8
Q ss_pred CCEEEEcCCCChHHHHH
Q 009843 54 RDCFCLMPTGGGKSMCY 70 (524)
Q Consensus 54 ~d~lv~apTGsGKTl~~ 70 (524)
..+++.+|+|+|||.+.
T Consensus 44 ~~lll~GppGtGKT~l~ 60 (276)
T d1fnna2 44 PRATLLGRPGTGKTVTL 60 (276)
T ss_dssp CEEEEECCTTSSHHHHH
T ss_pred CceEEECCCCCCHHHHH
Confidence 57999999999999664
No 91
>d1oywa3 c.37.1.19 (A:207-406) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=86.02 E-value=1.1 Score=38.28 Aligned_cols=60 Identities=17% Similarity=0.233 Sum_probs=53.3
Q ss_pred CCCeEEEeCcHHHHHHHHHHHHHHcCCceeEeccCCCHHHHHHHHHHhhcCCCcccEEEeCc
Q 009843 77 KPGIVLVVSPLIALMENQVIGLKEKGIAGEFLSSTQTMQVKTKIYEDLDSGKPSLRLLYVTP 138 (524)
Q Consensus 77 ~~~~~lvl~P~~~L~~q~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ll~~tp 138 (524)
....+||.++++.-++.....|+..|+.+..+++......+......+..+. .+++++|.
T Consensus 29 ~~~~~IIF~~t~~~~~~l~~~l~~~~~~~~~~h~~~~~~~r~~~~~~f~~g~--~~ilvaTd 88 (200)
T d1oywa3 29 RGKSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDD--LQIVVATV 88 (200)
T ss_dssp TTCCEEEECSSHHHHHHHHHHHHHTTCCEEEECTTSCHHHHHHHHHHHHTTS--CSEEEECT
T ss_pred CCCCEEEEEeeehhhHHhhhhhccCCceeEEecCCCcHHHHHHHHHHHhccc--ceEEEecc
Confidence 4568999999999999999999999999999999999999999999999887 66766664
No 92
>d2b8ta1 c.37.1.24 (A:11-149) Thymidine kinase, TK1, N-terminal domain {Ureaplasma urealyticum [TaxId: 2130]}
Probab=85.99 E-value=0.28 Score=39.65 Aligned_cols=32 Identities=22% Similarity=0.024 Sum_probs=20.0
Q ss_pred EEEEcCCCChHHHHHHHHH---hcCCCeEEEeCcH
Q 009843 56 CFCLMPTGGGKSMCYQIPA---LAKPGIVLVVSPL 87 (524)
Q Consensus 56 ~lv~apTGsGKTl~~~lp~---l~~~~~~lvl~P~ 87 (524)
-++.+|..||||.-.+--+ ...+.+++++-|.
T Consensus 5 ~~i~GpMfsGKTteLi~~~~~~~~~~~kv~~ikp~ 39 (139)
T d2b8ta1 5 EFITGPMFAGKTAELIRRLHRLEYADVKYLVFKPK 39 (139)
T ss_dssp EEEECSTTSCHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred EEEEccccCHHHHHHHHHHHHHHHCCCcEEEEEEc
Confidence 3788999999995422111 1235566777665
No 93
>d2rb4a1 c.37.1.19 (A:307-474) ATP-dependent RNA helicase DDX25 {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.28 E-value=1.3 Score=36.62 Aligned_cols=60 Identities=17% Similarity=0.215 Sum_probs=54.0
Q ss_pred CCeEEEeCcHHHHHHHHHHHHHHcCCceeEeccCCCHHHHHHHHHHhhcCCCcccEEEeCcc
Q 009843 78 PGIVLVVSPLIALMENQVIGLKEKGIAGEFLSSTQTMQVKTKIYEDLDSGKPSLRLLYVTPE 139 (524)
Q Consensus 78 ~~~~lvl~P~~~L~~q~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ll~~tpe 139 (524)
.+++||.+.++.-+......|.+.|+++..+++.....++......+..+. .+++++|..
T Consensus 32 ~~~~lIF~~~~~~~~~l~~~l~~~~~~~~~~hg~~~~~~R~~~~~~F~~g~--~~ilv~Td~ 91 (168)
T d2rb4a1 32 IGQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDGK--EKVLITTNV 91 (168)
T ss_dssp CSEEEEECSCHHHHHHHHHHHHTTTCCEEEECSSCCHHHHHHHHHHHHTTS--CSEEEECCS
T ss_pred CCcEEEEcCHHHHHHHHHHHHHhcCCcceecccchhhHHHHHHhhhhcCCc--eeeeechhh
Confidence 679999999999999999999999999999999999999999999999886 777776654
No 94
>d1hv8a1 c.37.1.19 (A:3-210) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=84.88 E-value=0.96 Score=38.85 Aligned_cols=71 Identities=15% Similarity=0.124 Sum_probs=51.1
Q ss_pred CCccEEEEeCccccHHHHHHHHHhC----CCceEEEcCCCCHHHHHHHHHHHhcCCCcEEEEccc-----c-cccccCCC
Q 009843 257 GDTCAIVYCLERTTCDELSAYLSAG----GISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVA-----F-GMGIDRKD 326 (524)
Q Consensus 257 ~~~~~IIf~~s~~~~e~l~~~L~~~----g~~~~~~h~~l~~~~R~~~~~~f~~g~~~VlVaT~a-----~-~~GiD~p~ 326 (524)
.+..++|.++|+.-|.++.+.+... +..+..++|+.+..+....+ + ..+|+|+|+- + ...++..+
T Consensus 71 ~~~~~lil~pt~~l~~q~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~l---~--~~~IlV~TP~~l~~~l~~~~~~~~~ 145 (208)
T d1hv8a1 71 NGIEAIILTPTRELAIQVADEIESLKGNKNLKIAKIYGGKAIYPQIKAL---K--NANIVVGTPGRILDHINRGTLNLKN 145 (208)
T ss_dssp SSCCEEEECSCHHHHHHHHHHHHHHHCSSCCCEEEECTTSCHHHHHHHH---H--TCSEEEECHHHHHHHHHTTCSCTTS
T ss_pred cCcceEEEeeccccchhhhhhhhhhcccCCeEEEEeeCCCChHHHHHhc---C--CCCEEEEChHHHHHHHHcCCCCccc
Confidence 4557999999999999988777653 67888999998876654433 2 4789999952 2 22456677
Q ss_pred ccEEEE
Q 009843 327 VRLVCH 332 (524)
Q Consensus 327 v~~VI~ 332 (524)
++++|.
T Consensus 146 l~~lVi 151 (208)
T d1hv8a1 146 VKYFIL 151 (208)
T ss_dssp CCEEEE
T ss_pred CcEEEE
Confidence 777663
No 95
>d1s2ma2 c.37.1.19 (A:252-422) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=84.64 E-value=1.5 Score=36.33 Aligned_cols=61 Identities=13% Similarity=0.214 Sum_probs=54.1
Q ss_pred CCCeEEEeCcHHHHHHHHHHHHHHcCCceeEeccCCCHHHHHHHHHHhhcCCCcccEEEeCcc
Q 009843 77 KPGIVLVVSPLIALMENQVIGLKEKGIAGEFLSSTQTMQVKTKIYEDLDSGKPSLRLLYVTPE 139 (524)
Q Consensus 77 ~~~~~lvl~P~~~L~~q~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ll~~tpe 139 (524)
...++||.++++.-++.....|...|+.+..+++.....++..+......+. .+++++|..
T Consensus 31 ~~~k~iVF~~~~~~~~~l~~~L~~~g~~~~~~h~~~~~~~r~~~~~~f~~~~--~~ilv~Td~ 91 (171)
T d1s2ma2 31 QINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQERNKVFHEFRQGK--VRTLVCSDL 91 (171)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHHTCCEEEECTTSCHHHHHHHHHHHHTTS--SSEEEESSC
T ss_pred CCCceEEEEeeeehhhHhHHhhhcccccccccccccchhhhhhhhhhcccCc--cccccchhH
Confidence 3678999999999999999999999999999999999999999999888876 778877764
No 96
>d2j0sa1 c.37.1.19 (A:22-243) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.05 E-value=2.6 Score=36.41 Aligned_cols=70 Identities=20% Similarity=0.253 Sum_probs=50.3
Q ss_pred CccEEEEeCccccHHHHHHHHHhC----CCceEEEcCCCCHHHHHHHHHHHhcCCCcEEEEccc------ccccccCCCc
Q 009843 258 DTCAIVYCLERTTCDELSAYLSAG----GISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVA------FGMGIDRKDV 327 (524)
Q Consensus 258 ~~~~IIf~~s~~~~e~l~~~L~~~----g~~~~~~h~~l~~~~R~~~~~~f~~g~~~VlVaT~a------~~~GiD~p~v 327 (524)
...++|.++|++-+.++++.+... ++.+..+.|+.+..+....++ ...+|||+|+- -...++..++
T Consensus 85 ~~~~lil~PtreLa~Qi~~~~~~l~~~~~i~~~~~~g~~~~~~~~~~l~----~~~~Ilv~TPgrl~~~~~~~~~~~~~l 160 (222)
T d2j0sa1 85 ETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLD----YGQHVVAGTPGRVFDMIRRRSLRTRAI 160 (222)
T ss_dssp SCCEEEECSSHHHHHHHHHHHHHHTTTTTCCEEEECTTSCHHHHHHHHH----HCCSEEEECHHHHHHHHHTTSSCCTTC
T ss_pred CceeEEecchHHHHHHHHHHHHHHhCccceeEEEEeecccchhhHHHhc----cCCeEEeCCCCcHHhcccccccccccc
Confidence 446899999999999998877653 578889999988665444332 24689999962 1334566677
Q ss_pred cEEE
Q 009843 328 RLVC 331 (524)
Q Consensus 328 ~~VI 331 (524)
+++|
T Consensus 161 ~~lV 164 (222)
T d2j0sa1 161 KMLV 164 (222)
T ss_dssp CEEE
T ss_pred eeee
Confidence 7766
No 97
>d1fuka_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=83.97 E-value=1.3 Score=36.31 Aligned_cols=60 Identities=17% Similarity=0.175 Sum_probs=53.2
Q ss_pred CCCeEEEeCcHHHHHHHHHHHHHHcCCceeEeccCCCHHHHHHHHHHhhcCCCcccEEEeCc
Q 009843 77 KPGIVLVVSPLIALMENQVIGLKEKGIAGEFLSSTQTMQVKTKIYEDLDSGKPSLRLLYVTP 138 (524)
Q Consensus 77 ~~~~~lvl~P~~~L~~q~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ll~~tp 138 (524)
...++||.|.++.-+++..+.|...|+.+..+++..+...+......+..+. .+++++|.
T Consensus 26 ~~~k~iIF~~s~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~l~~f~~~~--~~iLv~Td 85 (162)
T d1fuka_ 26 SVTQAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSGS--SRILISTD 85 (162)
T ss_dssp TCSCEEEEESSHHHHHHHHHHHHHTTCCEEEECTTSCHHHHHHHHHHHHTTS--CSEEEEEG
T ss_pred CCCcEEEEEEEEchHHHHHHHHhhcCceEEEeccCCchhhHHHHHHHHhhcc--cceeeccc
Confidence 3578999999999999999999999999999999999999999999888876 66776665
No 98
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=83.94 E-value=0.43 Score=42.56 Aligned_cols=32 Identities=19% Similarity=0.134 Sum_probs=21.3
Q ss_pred CEEEEcCCCChHHHHHHHHHhcCCCeEEEeCc
Q 009843 55 DCFCLMPTGGGKSMCYQIPALAKPGIVLVVSP 86 (524)
Q Consensus 55 d~lv~apTGsGKTl~~~lp~l~~~~~~lvl~P 86 (524)
.+++.||+|+|||..+-.-+-..+...+++..
T Consensus 34 ~ilL~GpPGtGKT~la~~la~~~~~~~~~i~~ 65 (273)
T d1gvnb_ 34 AFLLGGQPGSGKTSLRSAIFEETQGNVIVIDN 65 (273)
T ss_dssp EEEEECCTTSCTHHHHHHHHHHTTTCCEEECT
T ss_pred EEEEECCCCCCHHHHHHHHHHHhhcceEEEec
Confidence 48999999999997654333333444555554
No 99
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=83.48 E-value=0.2 Score=44.27 Aligned_cols=18 Identities=22% Similarity=0.305 Sum_probs=15.5
Q ss_pred CCEEEEcCCCChHHHHHH
Q 009843 54 RDCFCLMPTGGGKSMCYQ 71 (524)
Q Consensus 54 ~d~lv~apTGsGKTl~~~ 71 (524)
.++++.+|+|+|||....
T Consensus 36 ~~~Ll~GPpG~GKTtla~ 53 (239)
T d1ixsb2 36 EHLLLFGPPGLGKTTLAH 53 (239)
T ss_dssp CCEEEECCTTSCHHHHHH
T ss_pred CeEEEECCCCCCHHHHHH
Confidence 479999999999997653
No 100
>d2j0sa2 c.37.1.19 (A:244-411) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.48 E-value=2.9 Score=34.40 Aligned_cols=80 Identities=11% Similarity=0.056 Sum_probs=61.8
Q ss_pred EEEcCCCChHHHHHHHHHh--cCCCeEEEeCcHHHHHHHHHHHHHHcCCceeEeccCCCHHHHHHHHHHhhcCCCcccEE
Q 009843 57 FCLMPTGGGKSMCYQIPAL--AKPGIVLVVSPLIALMENQVIGLKEKGIAGEFLSSTQTMQVKTKIYEDLDSGKPSLRLL 134 (524)
Q Consensus 57 lv~apTGsGKTl~~~lp~l--~~~~~~lvl~P~~~L~~q~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ll 134 (524)
++.-+..-.|.-. +...+ ....++||.++++.-++.....|+..|+.+..+++..+..++......+..+. .+++
T Consensus 12 ~v~v~~~~~K~~~-L~~ll~~~~~~k~iiF~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~fk~g~--~~iL 88 (168)
T d2j0sa2 12 FVAVEREEWKFDT-LCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGA--SRVL 88 (168)
T ss_dssp EEEESSTTHHHHH-HHHHHHHHTSSEEEEECSSHHHHHHHHHHHHHTTCCCEEECTTSCHHHHHHHHHHHHHTS--SCEE
T ss_pred EEEecChHHHHHH-HHHHHHhCCCCceEEEeeeHHHHHHHHHHhhhcccchhhhhhhhhHHHHHHHHHHHhcCC--ccEE
Confidence 3444444556422 22232 23578999999999999999999999999999999999999999999998887 6777
Q ss_pred EeCcc
Q 009843 135 YVTPE 139 (524)
Q Consensus 135 ~~tpe 139 (524)
++|..
T Consensus 89 v~Td~ 93 (168)
T d2j0sa2 89 ISTDV 93 (168)
T ss_dssp EECGG
T ss_pred eccch
Confidence 77653
No 101
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=83.22 E-value=0.37 Score=38.98 Aligned_cols=24 Identities=33% Similarity=0.373 Sum_probs=18.8
Q ss_pred CCCEEEEcCCCChHHHHHHHHHhc
Q 009843 53 GRDCFCLMPTGGGKSMCYQIPALA 76 (524)
Q Consensus 53 g~d~lv~apTGsGKTl~~~lp~l~ 76 (524)
.+.+++.||+|+|||.....-+-.
T Consensus 2 ~k~I~l~G~~GsGKSTvak~La~~ 25 (169)
T d1kaga_ 2 KRNIFLVGPMGAGKSTIGRQLAQQ 25 (169)
T ss_dssp CCCEEEECCTTSCHHHHHHHHHHH
T ss_pred CCeEEEECCCCCCHHHHHHHHHHH
Confidence 467899999999999877654433
No 102
>d1xbta1 c.37.1.24 (A:18-150) Thymidine kinase, TK1, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=82.95 E-value=1.2 Score=35.44 Aligned_cols=32 Identities=22% Similarity=0.061 Sum_probs=21.7
Q ss_pred EEEEcCCCChHHHHHHHHHh----cCCCeEEEeCcHH
Q 009843 56 CFCLMPTGGGKSMCYQIPAL----AKPGIVLVVSPLI 88 (524)
Q Consensus 56 ~lv~apTGsGKTl~~~lp~l----~~~~~~lvl~P~~ 88 (524)
-++.+|..||||.- ++-.+ ..+..++++-|..
T Consensus 5 ~li~GpMfsGKTt~-Li~~~~~~~~~g~~v~~ikp~~ 40 (133)
T d1xbta1 5 QVILGPMFSGKSTE-LMRRVRRFQIAQYKCLVIKYAK 40 (133)
T ss_dssp EEEECCTTSCHHHH-HHHHHHHHHTTTCCEEEEEETT
T ss_pred EEEEecccCHHHHH-HHHHHHHHHHcCCcEEEEeccc
Confidence 47889999999964 33222 2356688887753
No 103
>d2eyqa2 c.37.1.19 (A:349-465) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=81.41 E-value=0.45 Score=37.09 Aligned_cols=78 Identities=13% Similarity=0.003 Sum_probs=57.5
Q ss_pred hHHHHHHHHHHhcCCccEEEEeCccccHHHHHHHHHhCCCceEEEcCCCCHHHHHHHHHHHhcCCCcEEEEccccccccc
Q 009843 244 DAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGID 323 (524)
Q Consensus 244 ~~~~~l~~~l~~~~~~~~IIf~~s~~~~e~l~~~L~~~g~~~~~~h~~l~~~~R~~~~~~f~~g~~~VlVaT~a~~~GiD 323 (524)
+.++.|..+++.. +.++||.|.|....+.+.+.|++.|+.+..+.+ .+ .+.++. +.|+...+..|+-
T Consensus 21 ~p~~~L~~~i~~~-~~~Vli~a~s~g~~erl~e~L~~~~i~~~~~~~-~~---------~~~~~~--~~i~~~~l~~GF~ 87 (117)
T d2eyqa2 21 APLDALRKFLETF-DGPVVFSVESEGRREALGELLARIKIAPQRIMR-LD---------EASDRG--RYLMIGAAEHGFV 87 (117)
T ss_dssp STTHHHHHHHTTC-CSCCCEEESSHHHHHHHHHHHGGGTCCCEECSS-GG---------GCCTTC--CEEEECCCCSCEE
T ss_pred cHHHHHHHHHHhC-CCeEEEEECCccHHHHHHHHHHHcCCCceEecC-hh---------hhcCce--EEEEEecCccccc
Confidence 4567788888764 457899999999999999999999998765543 22 133444 4555567889998
Q ss_pred CCCccEEEEeC
Q 009843 324 RKDVRLVCHFN 334 (524)
Q Consensus 324 ~p~v~~VI~~~ 334 (524)
.|+.+++|...
T Consensus 88 ~~~~~l~vItE 98 (117)
T d2eyqa2 88 DTVRNLALICE 98 (117)
T ss_dssp ETTTTEEEEEH
T ss_pred cCCCCEEEEEc
Confidence 88888887544
No 104
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
Probab=81.34 E-value=0.52 Score=45.46 Aligned_cols=42 Identities=21% Similarity=0.260 Sum_probs=29.8
Q ss_pred HcCCCEEEEcCCCChHHHHHH--HH-HhcCCCeEEEeCcHHHHHH
Q 009843 51 LSGRDCFCLMPTGGGKSMCYQ--IP-ALAKPGIVLVVSPLIALME 92 (524)
Q Consensus 51 l~g~d~lv~apTGsGKTl~~~--lp-~l~~~~~~lvl~P~~~L~~ 92 (524)
...+++++.|+||+|||.... ++ ++..+..++|+=|.-++..
T Consensus 48 ~~~~H~~I~G~tGsGKT~~l~~li~~~~~~g~~~iiiD~kge~~~ 92 (433)
T d1e9ra_ 48 AEPRHLLVNGATGTGKSVLLRELAYTGLLRGDRMVIVDPNGDMLS 92 (433)
T ss_dssp GGGGCEEEEECTTSSHHHHHHHHHHHHHHTTCEEEEEEETTHHHH
T ss_pred cccceEEEEeCCCCcHHHHHHHHHHHHHhCCCCEEEEeCChhHHH
Confidence 345789999999999997642 22 2345677888888876643
No 105
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=80.03 E-value=0.59 Score=40.93 Aligned_cols=18 Identities=22% Similarity=0.261 Sum_probs=15.4
Q ss_pred CCEEEEcCCCChHHHHHH
Q 009843 54 RDCFCLMPTGGGKSMCYQ 71 (524)
Q Consensus 54 ~d~lv~apTGsGKTl~~~ 71 (524)
.++++.||+|+|||..+-
T Consensus 36 ~~~L~~GPpGtGKT~lA~ 53 (238)
T d1in4a2 36 DHVLLAGPPGLGKTTLAH 53 (238)
T ss_dssp CCEEEESSTTSSHHHHHH
T ss_pred CeEEEECCCCCcHHHHHH
Confidence 479999999999997653
No 106
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=79.95 E-value=0.54 Score=38.61 Aligned_cols=20 Identities=25% Similarity=0.214 Sum_probs=16.0
Q ss_pred cCCCEEEEcCCCChHHHHHH
Q 009843 52 SGRDCFCLMPTGGGKSMCYQ 71 (524)
Q Consensus 52 ~g~d~lv~apTGsGKTl~~~ 71 (524)
.|+-+++.+|+|+|||...-
T Consensus 3 ~g~iI~l~G~~GsGKSTia~ 22 (176)
T d1zp6a1 3 GGNILLLSGHPGSGKSTIAE 22 (176)
T ss_dssp TTEEEEEEECTTSCHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHH
Confidence 45667899999999997643
No 107
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=79.50 E-value=0.65 Score=43.90 Aligned_cols=51 Identities=16% Similarity=0.070 Sum_probs=30.5
Q ss_pred cCCCCCCHHHHHHHHHHHcC----CCEEEEcCCCChHHHHHHHHHhcCCCeEEEe
Q 009843 34 FGHAQFRDKQLDAIQAVLSG----RDCFCLMPTGGGKSMCYQIPALAKPGIVLVV 84 (524)
Q Consensus 34 fg~~~~r~~Q~~~i~~~l~g----~d~lv~apTGsGKTl~~~lp~l~~~~~~lvl 84 (524)
+|+......-.+++..++.| +.+++.+|+|+|||.....-+-..++.++-+
T Consensus 131 ~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~g~~~~gk~~~~~~~~~~~~~~~i~i 185 (362)
T d1svma_ 131 CLLPKMDSVVYDFLKCMVYNIPKKRYWLFKGPIDSGKTTLAAALLELCGGKALNV 185 (362)
T ss_dssp TTSTTHHHHHHHHHHHHHHCCTTCCEEEEECSTTSSHHHHHHHHHHHHCCEEECC
T ss_pred hcccchHHHHHHHHHHHHhCCCCcCeEEEECCCCCCHHHHHHHHHHHcCCCEEEE
Confidence 45555444444555555555 4689999999999976543333334444433
No 108
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]}
Probab=79.40 E-value=2.5 Score=37.63 Aligned_cols=97 Identities=15% Similarity=0.183 Sum_probs=50.8
Q ss_pred HHHHHHHc-C-----CCEEEEcCCCChHHHHHH-HH--HhcCCCeEEEeCcHHHHHHHHHHHHHHcCCceeEeccCCCHH
Q 009843 45 DAIQAVLS-G-----RDCFCLMPTGGGKSMCYQ-IP--ALAKPGIVLVVSPLIALMENQVIGLKEKGIAGEFLSSTQTMQ 115 (524)
Q Consensus 45 ~~i~~~l~-g-----~d~lv~apTGsGKTl~~~-lp--~l~~~~~~lvl~P~~~L~~q~~~~l~~~gi~~~~~~~~~~~~ 115 (524)
.+++.++. | +-+.+.+|+|+|||...+ +. +...++.++|+----++-.+ .++.+|+.
T Consensus 40 ~~lD~~Lg~GGi~~g~itei~G~~gsGKTtl~l~~~~~~q~~g~~~vyidtE~~~~~~---~a~~~Gvd----------- 105 (263)
T d1u94a1 40 LSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPI---YARKLGVD----------- 105 (263)
T ss_dssp HHHHHHTSSSSEETTSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCCHH---HHHHTTCC-----------
T ss_pred HHHHHHhcCCCccCceEEEEecCCCcHHHHHHHHHHHHHHcCCCEEEEEccccccCHH---HHHHhCCC-----------
Confidence 46677774 4 457899999999995432 22 22335566665432222111 23333432
Q ss_pred HHHHHHHHhhcCCCcccEEEeCcccccChhhHHHHHhhhccCCccEEEEecccccc
Q 009843 116 VKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCIS 171 (524)
Q Consensus 116 ~~~~~~~~l~~~~~~~~ll~~tpe~v~t~~~~~~l~~~~~~~~l~~iViDEaH~i~ 171 (524)
.-+++|..|..+ ...+..+..+...+.+++||||=+-.+.
T Consensus 106 --------------~d~v~~~~~~~~--E~~~~~i~~l~~~~~~~liViDSi~al~ 145 (263)
T d1u94a1 106 --------------IDNLLCSQPDTG--EQALEICDALARSGAVDVIVVDSVAALT 145 (263)
T ss_dssp --------------GGGCEEECCSSH--HHHHHHHHHHHHHTCCSEEEEECGGGCC
T ss_pred --------------HHHEEEecCCCH--HHHHHHHHHHHhcCCCCEEEEECccccc
Confidence 123444444322 1223333344444668899999887653
No 109
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=77.18 E-value=3.5 Score=36.76 Aligned_cols=97 Identities=22% Similarity=0.248 Sum_probs=52.5
Q ss_pred HHHHHHHc------CCCEEEEcCCCChHHHHHHHHH---hcCCCeEEEeCcHHHHHHHHHHHHHHcCCceeEeccCCCHH
Q 009843 45 DAIQAVLS------GRDCFCLMPTGGGKSMCYQIPA---LAKPGIVLVVSPLIALMENQVIGLKEKGIAGEFLSSTQTMQ 115 (524)
Q Consensus 45 ~~i~~~l~------g~d~lv~apTGsGKTl~~~lp~---l~~~~~~lvl~P~~~L~~q~~~~l~~~gi~~~~~~~~~~~~ 115 (524)
..++.++. |+-+.+.+|.|+|||...+..+ ...++.+++|-.-.++-.+ .++++|+.
T Consensus 46 ~~lD~~lg~gG~~~g~i~e~~G~~~~GKT~l~l~~~~~~q~~g~~~vyIDtE~~~~~e---~a~~~GvD----------- 111 (269)
T d1mo6a1 46 IALDVALGIGGLPRGRVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPD---YAKKLGVD----------- 111 (269)
T ss_dssp HHHHHHTSSSSBCSSSEEEEECSSSSSHHHHHHHHHHHHHHTTCEEEEEESSCCCCHH---HHHHHTCC-----------
T ss_pred HHHHHhhccCCcccceeEEEecCCCcHHHHHHHHHHHHHhcCCCEEEEEECCccCCHH---HHHHhCCC-----------
Confidence 46677774 3557889999999996543222 2235555555432222222 12222321
Q ss_pred HHHHHHHHhhcCCCcccEEEeCcccccChhhHHHHHhhhccCCccEEEEecccccc
Q 009843 116 VKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCIS 171 (524)
Q Consensus 116 ~~~~~~~~l~~~~~~~~ll~~tpe~v~t~~~~~~l~~~~~~~~l~~iViDEaH~i~ 171 (524)
.-++++..|+.+ ...+..+..+...+.+++||+|=+-.+.
T Consensus 112 --------------~d~il~~~~~~~--E~~~~~~~~l~~~~~~~liIiDSi~al~ 151 (269)
T d1mo6a1 112 --------------TDSLLVSQPDTG--EQALEIADMLIRSGALDIVVIDSVAALV 151 (269)
T ss_dssp --------------GGGCEEECCSSH--HHHHHHHHHHHHTTCEEEEEEECSTTCC
T ss_pred --------------HHHeEEecCCCH--HHHHHHHHHHHhcCCCCEEEEecccccc
Confidence 124566655432 2233333444455678999999886654
No 110
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=77.00 E-value=2.6 Score=39.87 Aligned_cols=16 Identities=19% Similarity=0.204 Sum_probs=14.1
Q ss_pred CCEEEEcCCCChHHHH
Q 009843 54 RDCFCLMPTGGGKSMC 69 (524)
Q Consensus 54 ~d~lv~apTGsGKTl~ 69 (524)
.++++++|.|.|||..
T Consensus 44 ~n~llvG~~GvGKtai 59 (387)
T d1qvra2 44 NNPVLIGEPGVGKTAI 59 (387)
T ss_dssp CCCEEEECTTSCHHHH
T ss_pred CCCeEECCCCCCHHHH
Confidence 5799999999999964
No 111
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=76.14 E-value=1.2 Score=35.55 Aligned_cols=15 Identities=27% Similarity=0.266 Sum_probs=12.6
Q ss_pred EEEEcCCCChHHHHH
Q 009843 56 CFCLMPTGGGKSMCY 70 (524)
Q Consensus 56 ~lv~apTGsGKTl~~ 70 (524)
+++.+|+|||||...
T Consensus 5 Iii~G~pGsGKTTla 19 (152)
T d1ly1a_ 5 ILTIGCPGSGKSTWA 19 (152)
T ss_dssp EEEECCTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 578899999999754
No 112
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=75.49 E-value=1.2 Score=36.13 Aligned_cols=16 Identities=31% Similarity=0.376 Sum_probs=13.5
Q ss_pred EEEEcCCCChHHHHHH
Q 009843 56 CFCLMPTGGGKSMCYQ 71 (524)
Q Consensus 56 ~lv~apTGsGKTl~~~ 71 (524)
+++.||+|+|||..+.
T Consensus 5 I~i~G~~GsGKTTva~ 20 (176)
T d2bdta1 5 YIITGPAGVGKSTTCK 20 (176)
T ss_dssp EEEECSTTSSHHHHHH
T ss_pred EEEECCCCCCHHHHHH
Confidence 6788999999997654
No 113
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=75.43 E-value=4.9 Score=32.90 Aligned_cols=15 Identities=27% Similarity=0.273 Sum_probs=12.5
Q ss_pred EEEEcCCCChHHHHH
Q 009843 56 CFCLMPTGGGKSMCY 70 (524)
Q Consensus 56 ~lv~apTGsGKTl~~ 70 (524)
++++|++|||||..+
T Consensus 17 iil~G~pGsGKST~a 31 (172)
T d1yj5a2 17 VVAVGFPGAGKSTFI 31 (172)
T ss_dssp EEEECCTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 678899999999643
No 114
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=75.17 E-value=0.85 Score=37.45 Aligned_cols=16 Identities=38% Similarity=0.542 Sum_probs=14.3
Q ss_pred CCEEEEcCCCChHHHH
Q 009843 54 RDCFCLMPTGGGKSMC 69 (524)
Q Consensus 54 ~d~lv~apTGsGKTl~ 69 (524)
|++++.+|+|+|||..
T Consensus 2 k~v~ItG~~GtGKTtl 17 (189)
T d2i3ba1 2 RHVFLTGPPGVGKTTL 17 (189)
T ss_dssp CCEEEESCCSSCHHHH
T ss_pred cEEEEECCCCCcHHHH
Confidence 6899999999999964
No 115
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]}
Probab=75.14 E-value=0.45 Score=44.35 Aligned_cols=20 Identities=20% Similarity=0.208 Sum_probs=16.9
Q ss_pred cCCCEEEEcCCCChHHHHHH
Q 009843 52 SGRDCFCLMPTGGGKSMCYQ 71 (524)
Q Consensus 52 ~g~d~lv~apTGsGKTl~~~ 71 (524)
.++++|+.+|+|+|||...-
T Consensus 27 ~~h~vLl~G~pG~GKT~lar 46 (333)
T d1g8pa_ 27 GIGGVLVFGDRGTGKSTAVR 46 (333)
T ss_dssp GGCCEEEECCGGGCTTHHHH
T ss_pred CCCeEEEECCCCccHHHHHH
Confidence 45789999999999997653
No 116
>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]}
Probab=74.24 E-value=1.1 Score=41.59 Aligned_cols=25 Identities=28% Similarity=0.446 Sum_probs=19.4
Q ss_pred HHHHHHcCCC--EEEEcCCCChHHHHH
Q 009843 46 AIQAVLSGRD--CFCLMPTGGGKSMCY 70 (524)
Q Consensus 46 ~i~~~l~g~d--~lv~apTGsGKTl~~ 70 (524)
.++.+++|.+ +++.++||+|||.+.
T Consensus 67 lv~~~l~G~n~~i~aYGqtgSGKTyT~ 93 (323)
T d1bg2a_ 67 IVKDVLEGYNGTIFAYGQTSSGKTHTM 93 (323)
T ss_dssp HHHHHHTTCCEEEEEECSTTSSHHHHH
T ss_pred HHHHHHcCCCcceeeecccCCCCceec
Confidence 3556678876 577899999999874
No 117
>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}
Probab=74.17 E-value=16 Score=27.69 Aligned_cols=48 Identities=15% Similarity=0.248 Sum_probs=33.8
Q ss_pred CCccEEEEeccccccc-cCCCCHHHHHHHHHHHHhCCCCCEEEEeccCChhHHHHHH
Q 009843 157 GLLNLVAIDEAHCISS-WGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVM 212 (524)
Q Consensus 157 ~~l~~iViDEaH~i~~-~g~~fr~~~~~l~~l~~~~~~~~ii~lSAT~~~~~~~~i~ 212 (524)
..++++++| .+ +-+ .| +.-+..+++..|+.|+|++||...........
T Consensus 46 ~~~dlii~D-~~-mp~~~G------~el~~~l~~~~~~~piI~~t~~~~~~~~~~a~ 94 (123)
T d1krwa_ 46 KTPDVLLSD-IR-MPGMDG------LALLKQIKQRHPMLPVIIMTAHSDLDAAVSAY 94 (123)
T ss_dssp CCCSEEEEC-CS-SSSSTT------HHHHHHHHHHSSSCCEEESCCCSCHHHHHHHH
T ss_pred CCCCEEEeh-hh-cCCchH------HHHHHHHHHhCCCCeEEEEecCCCHHHHHHHH
Confidence 347899999 33 332 23 34567778889999999999999877655433
No 118
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=73.98 E-value=4.5 Score=35.97 Aligned_cols=119 Identities=18% Similarity=0.229 Sum_probs=62.3
Q ss_pred hHHHHHHHHHHcCCCCC---CH----------HHHHHHHHHHc-C-----CCEEEEcCCCChHHHHHH-HHH--hcCCCe
Q 009843 23 KEALVKLLRWHFGHAQF---RD----------KQLDAIQAVLS-G-----RDCFCLMPTGGGKSMCYQ-IPA--LAKPGI 80 (524)
Q Consensus 23 ~~~~~~~l~~~fg~~~~---r~----------~Q~~~i~~~l~-g-----~d~lv~apTGsGKTl~~~-lp~--l~~~~~ 80 (524)
.+.+...|.+.||-... .+ -=..++..++. | +-+.+.+|.|+|||...+ +.+ ...++.
T Consensus 8 ~~~~~~~i~k~~g~~~~~~~~~~~~~~~~~i~TGs~~lD~~Lg~GGip~g~itei~G~~~sGKT~l~l~~~~~aqk~g~~ 87 (268)
T d1xp8a1 8 IETAMSQIEKAFGKGSIMKLGAESKLDVQVVSTGSLSLDLALGVGGIPRGRITEIYGPESGGKTTLALAIVAQAQKAGGT 87 (268)
T ss_dssp HHHHHHHHHHHHCTTSSCCTTSCCCCCCCEECCSCHHHHHHTSSSSEETTSEEEEEESTTSSHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHhCCcceEECCCcCCCCCCeEcCCCHHHHHHhcCCCccCceEEEEecCCccchHHHHHHHHHHHHhCCCE
Confidence 35566677777875321 11 11245677775 3 446788999999995432 221 122455
Q ss_pred EEEeCcHHHHHHHHHHHHHHcCCceeEeccCCCHHHHHHHHHHhhcCCCcccEEEeCcccccChhhHHHHHhhhccCCcc
Q 009843 81 VLVVSPLIALMENQVIGLKEKGIAGEFLSSTQTMQVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLN 160 (524)
Q Consensus 81 ~lvl~P~~~L~~q~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ll~~tpe~v~t~~~~~~l~~~~~~~~l~ 160 (524)
++|+----++-.+ .++.+|+. .-+++|..|... ...+..+..+...+.++
T Consensus 88 v~yiDtE~~~~~~---~a~~~Gvd-------------------------~d~i~~~~~~~~--E~~~~~~~~l~~~~~~~ 137 (268)
T d1xp8a1 88 CAFIDAEHALDPV---YARALGVN-------------------------TDELLVSQPDNG--EQALEIMELLVRSGAID 137 (268)
T ss_dssp EEEEESSCCCCHH---HHHHTTCC-------------------------GGGCEEECCSSH--HHHHHHHHHHHTTTCCS
T ss_pred EEEEECCccCCHH---HHHHhCCC-------------------------chhEEEEcCCCH--HHHHHHHHHHHhcCCCc
Confidence 5555332222111 22333332 124555544322 22333444555566799
Q ss_pred EEEEecccccc
Q 009843 161 LVAIDEAHCIS 171 (524)
Q Consensus 161 ~iViDEaH~i~ 171 (524)
+||||=+-.+.
T Consensus 138 liIiDSi~al~ 148 (268)
T d1xp8a1 138 VVVVDSVAALT 148 (268)
T ss_dssp EEEEECTTTCC
T ss_pred EEEEecccccc
Confidence 99999887764
No 119
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=73.89 E-value=1.4 Score=35.82 Aligned_cols=20 Identities=20% Similarity=0.303 Sum_probs=16.1
Q ss_pred CCCEEEEcCCCChHHHHHHH
Q 009843 53 GRDCFCLMPTGGGKSMCYQI 72 (524)
Q Consensus 53 g~d~lv~apTGsGKTl~~~l 72 (524)
+.++++.||+|+|||...-.
T Consensus 5 ~~~I~i~G~~GsGKTT~~~~ 24 (174)
T d1y63a_ 5 GINILITGTPGTGKTSMAEM 24 (174)
T ss_dssp SCEEEEECSTTSSHHHHHHH
T ss_pred CCEEEEEeCCCCCHHHHHHH
Confidence 45689999999999976543
No 120
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=73.81 E-value=1.2 Score=37.60 Aligned_cols=24 Identities=17% Similarity=0.134 Sum_probs=17.4
Q ss_pred HHHHHHc-----CCCEEEEcCCCChHHHH
Q 009843 46 AIQAVLS-----GRDCFCLMPTGGGKSMC 69 (524)
Q Consensus 46 ~i~~~l~-----g~d~lv~apTGsGKTl~ 69 (524)
.+..++. |+-+++.+|+|+|||..
T Consensus 11 ~LD~ll~GGi~~G~v~~i~G~~GsGKT~l 39 (242)
T d1n0wa_ 11 ELDKLLQGGIETGSITEMFGEFRTGKTQI 39 (242)
T ss_dssp HHHHHTTTSEETTSEEEEECCTTSSHHHH
T ss_pred HHHHhhcCCCcCCEEEEEEeCCCCCHHHH
Confidence 3455554 45678999999999943
No 121
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]}
Probab=73.66 E-value=16 Score=31.58 Aligned_cols=21 Identities=33% Similarity=0.458 Sum_probs=16.3
Q ss_pred HHcCCCEEEEcCCCChHHHHH
Q 009843 50 VLSGRDCFCLMPTGGGKSMCY 70 (524)
Q Consensus 50 ~l~g~d~lv~apTGsGKTl~~ 70 (524)
++.|.-+++.|++|+|||...
T Consensus 26 ~~pg~~~~i~G~~G~GKS~l~ 46 (274)
T d1nlfa_ 26 MVAGTVGALVSPGGAGKSMLA 46 (274)
T ss_dssp EETTSEEEEEESTTSSHHHHH
T ss_pred ccCCcEEEEEeCCCCCHHHHH
Confidence 445666789999999999543
No 122
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=73.25 E-value=0.96 Score=36.79 Aligned_cols=19 Identities=16% Similarity=0.062 Sum_probs=15.1
Q ss_pred CCEEEEcCCCChHHHHHHH
Q 009843 54 RDCFCLMPTGGGKSMCYQI 72 (524)
Q Consensus 54 ~d~lv~apTGsGKTl~~~l 72 (524)
..+++.||+|+|||.....
T Consensus 5 ~~I~i~G~pGsGKTTia~~ 23 (173)
T d1rkba_ 5 PNILLTGTPGVGKTTLGKE 23 (173)
T ss_dssp CCEEEECSTTSSHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHH
Confidence 3578999999999975543
No 123
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=72.90 E-value=1.5 Score=35.79 Aligned_cols=17 Identities=24% Similarity=0.196 Sum_probs=14.5
Q ss_pred CCEEEEcCCCChHHHHH
Q 009843 54 RDCFCLMPTGGGKSMCY 70 (524)
Q Consensus 54 ~d~lv~apTGsGKTl~~ 70 (524)
+.+++.||+|+|||...
T Consensus 8 K~I~i~G~~GsGKTTla 24 (192)
T d1lw7a2 8 KTVAILGGESSGKSVLV 24 (192)
T ss_dssp EEEEEECCTTSHHHHHH
T ss_pred eEEEEECCCCCCHHHHH
Confidence 56899999999999644
No 124
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=70.03 E-value=1.4 Score=36.03 Aligned_cols=19 Identities=21% Similarity=0.237 Sum_probs=15.7
Q ss_pred CCEEEEcCCCChHHHHHHH
Q 009843 54 RDCFCLMPTGGGKSMCYQI 72 (524)
Q Consensus 54 ~d~lv~apTGsGKTl~~~l 72 (524)
+++++.+++|+|||...-.
T Consensus 1 k~I~liG~~GsGKsTi~k~ 19 (161)
T d1viaa_ 1 KNIVFIGFMGSGKSTLARA 19 (161)
T ss_dssp CCEEEECCTTSCHHHHHHH
T ss_pred CcEEEECCCCCCHHHHHHH
Confidence 4688999999999976543
No 125
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=69.89 E-value=1.4 Score=40.56 Aligned_cols=34 Identities=29% Similarity=0.282 Sum_probs=23.4
Q ss_pred CCCHHHHHHHHHHHc-------C-----C---CEEEEcCCCChHHHHHH
Q 009843 38 QFRDKQLDAIQAVLS-------G-----R---DCFCLMPTGGGKSMCYQ 71 (524)
Q Consensus 38 ~~r~~Q~~~i~~~l~-------g-----~---d~lv~apTGsGKTl~~~ 71 (524)
..=-+|.+|+..+.. | + .+++.+|||+|||..+.
T Consensus 22 ~~viGQ~~a~~~v~~~v~~~~~~l~~~~~p~~~~lf~Gp~GvGKT~lak 70 (315)
T d1r6bx3 22 MLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTV 70 (315)
T ss_dssp TTSCSCHHHHHHHHHHHHHHHTTCSCTTSCSEEEEEECSTTSSHHHHHH
T ss_pred CeecChHHHHHHHHHHHHHHHccCCCCCCCceEEEEECCCcchhHHHHH
Confidence 344468888876541 1 1 47889999999997653
No 126
>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]}
Probab=69.57 E-value=1.4 Score=41.30 Aligned_cols=25 Identities=32% Similarity=0.585 Sum_probs=19.0
Q ss_pred HHHHHHcCCC--EEEEcCCCChHHHHH
Q 009843 46 AIQAVLSGRD--CFCLMPTGGGKSMCY 70 (524)
Q Consensus 46 ~i~~~l~g~d--~lv~apTGsGKTl~~ 70 (524)
.++.+++|.+ +++.++||+|||.+.
T Consensus 71 lv~~~l~G~n~ti~aYG~tgSGKT~Tm 97 (354)
T d1goja_ 71 TVDDILNGYNGTVFAYGQTGAGKSYTM 97 (354)
T ss_dssp HHHHHTTTCCEEEEEECSTTSSHHHHH
T ss_pred HHHHhhccCceeEEecccCCCCcceee
Confidence 3455668877 577799999999774
No 127
>d1t6na_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=69.39 E-value=12 Score=31.32 Aligned_cols=72 Identities=17% Similarity=0.226 Sum_probs=48.8
Q ss_pred CccEEEEeCccccHHHHHHHHHhC-----CCceEEEcCCCCHHHHHHHHHHHhcCCCcEEEEccc-----c-cccccCCC
Q 009843 258 DTCAIVYCLERTTCDELSAYLSAG-----GISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVA-----F-GMGIDRKD 326 (524)
Q Consensus 258 ~~~~IIf~~s~~~~e~l~~~L~~~-----g~~~~~~h~~l~~~~R~~~~~~f~~g~~~VlVaT~a-----~-~~GiD~p~ 326 (524)
+..++|.++|++-+.++.+.+... .+.+...+|+.+..... ..+..+..+|||+|+- + ...+++.+
T Consensus 69 ~~~~lil~PtreL~~qi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---~~l~~~~~~ilI~TP~rl~~~~~~~~~~l~~ 145 (207)
T d1t6na_ 69 QVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDE---EVLKKNCPHIVVGTPGRILALARNKSLNLKH 145 (207)
T ss_dssp CCCEEEECSCHHHHHHHHHHHHHHTTTSTTCCEEEESCCSCHHHHH---HHHHHSCCSEEEECHHHHHHHHHTTSSCCTT
T ss_pred CceEEEEeccchhhHHHHHHHHHHHhhCCCceeEEEeccccHHHHH---HHHHhcCCCEEEeCcchhhhhccCCceeccc
Confidence 446899999999999988888654 24577788888765433 3344567899999973 1 12345556
Q ss_pred ccEEEE
Q 009843 327 VRLVCH 332 (524)
Q Consensus 327 v~~VI~ 332 (524)
++++|.
T Consensus 146 l~~lVl 151 (207)
T d1t6na_ 146 IKHFIL 151 (207)
T ss_dssp CCEEEE
T ss_pred cceeeh
Confidence 665553
No 128
>d1qxna_ c.46.1.3 (A:) Polysulfide-sulfur transferase (sulfide dehydrogenase, Sud) {Wolinella succinogenes [TaxId: 844]}
Probab=68.87 E-value=3.7 Score=32.35 Aligned_cols=38 Identities=13% Similarity=0.276 Sum_probs=32.8
Q ss_pred cCCccEEEEeCccccHHHHHHHHHhCCC-ceEEEcCCCC
Q 009843 256 NGDTCAIVYCLERTTCDELSAYLSAGGI-SCAAYHAGLN 293 (524)
Q Consensus 256 ~~~~~~IIf~~s~~~~e~l~~~L~~~g~-~~~~~h~~l~ 293 (524)
.++.++|+||.+-..+...+..|.+.|+ +|..+.||+.
T Consensus 80 ~~~~~ivvyC~~G~rs~~aa~~L~~~G~~nV~~l~GG~~ 118 (137)
T d1qxna_ 80 DPEKPVVVFCKTAARAALAGKTLREYGFKTIYNSEGGMD 118 (137)
T ss_dssp CTTSCEEEECCSSSCHHHHHHHHHHHTCSCEEEESSCHH
T ss_pred CcccceeeeecccchHHHHHHHHHHcCCCcEEEecCHHH
Confidence 3567899999999999999999999998 5788999963
No 129
>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=68.59 E-value=28 Score=29.38 Aligned_cols=127 Identities=9% Similarity=-0.007 Sum_probs=73.4
Q ss_pred CCCHHHHHHHHHHHc--CCCEEEEcCCCChHHHHHHHHHhcCCCeEEEeCcHHHHHHHHHHHHHHcCCce--eEeccCCC
Q 009843 38 QFRDKQLDAIQAVLS--GRDCFCLMPTGGGKSMCYQIPALAKPGIVLVVSPLIALMENQVIGLKEKGIAG--EFLSSTQT 113 (524)
Q Consensus 38 ~~r~~Q~~~i~~~l~--g~d~lv~apTGsGKTl~~~lp~l~~~~~~lvl~P~~~L~~q~~~~l~~~gi~~--~~~~~~~~ 113 (524)
...|.|-+.+..+.+ +-.-++.-.||+|-|..++..++..+++++-+=+.-.......+.+++.|... ....+..
T Consensus 42 ~i~~~~g~lL~~L~~~~~~k~vLEiGt~~GyStl~~a~al~~~g~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~Gda- 120 (219)
T d2avda1 42 MMTCEQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPA- 120 (219)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCH-
T ss_pred ccCHHHHHHHHHHHHccCCCeEEEEechhhHHHHHHHHhCCCCceEEEEeechhHHHHHHHHHHhcCccceEEEEEeeh-
Confidence 457888777776553 33457788899999998888888777877776655555555556666666543 2222221
Q ss_pred HHHHHHHHHHhhcCCCcccEEEeCcccccChhhHHHHHhhhccCCccEEEEecccc
Q 009843 114 MQVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHC 169 (524)
Q Consensus 114 ~~~~~~~~~~l~~~~~~~~ll~~tpe~v~t~~~~~~l~~~~~~~~l~~iViDEaH~ 169 (524)
.......... .....+++++.-.+.-.....+....+.... =++||+|-++.
T Consensus 121 ~e~l~~~~~~--~~~~~fD~ifiD~dk~~y~~~~~~~~~lL~~--GGvii~Dn~l~ 172 (219)
T d2avda1 121 LETLDELLAA--GEAGTFDVAVVDADKENCSAYYERCLQLLRP--GGILAVLRVLW 172 (219)
T ss_dssp HHHHHHHHHT--TCTTCEEEEEECSCSTTHHHHHHHHHHHEEE--EEEEEEECCSG
T ss_pred hhcchhhhhh--cccCCccEEEEeCCHHHHHHHHHHHHHHhcC--CcEEEEeCCcc
Confidence 1111111111 1123478887765543334444444433322 25788888875
No 130
>d1yt8a4 c.46.1.2 (A:243-372) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=68.58 E-value=2.7 Score=32.89 Aligned_cols=39 Identities=8% Similarity=0.011 Sum_probs=34.3
Q ss_pred cCCccEEEEeCccccHHHHHHHHHhCCCceEEEcCCCCH
Q 009843 256 NGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 294 (524)
Q Consensus 256 ~~~~~~IIf~~s~~~~e~l~~~L~~~g~~~~~~h~~l~~ 294 (524)
..+.++++||.+-..+...+..|++.|+.+..+.||+..
T Consensus 78 ~~~~~ivl~C~~G~rS~~aa~~L~~~G~~v~~l~GG~~a 116 (130)
T d1yt8a4 78 VRGARLVLVDDDGVRANMSASWLAQMGWQVAVLDGLSEA 116 (130)
T ss_dssp SBTCEEEEECSSSSHHHHHHHHHHHTTCEEEEECSCCGG
T ss_pred CccceEEeecCCCccHHHHHHHHHHcCCCeEEEcCchHH
Confidence 456689999999888999999999999999999999753
No 131
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=68.00 E-value=1.6 Score=37.37 Aligned_cols=34 Identities=21% Similarity=0.228 Sum_probs=22.5
Q ss_pred CCCEEEEcCCCChHHHH-HHHH---HhcCCCeEEEeCc
Q 009843 53 GRDCFCLMPTGGGKSMC-YQIP---ALAKPGIVLVVSP 86 (524)
Q Consensus 53 g~d~lv~apTGsGKTl~-~~lp---~l~~~~~~lvl~P 86 (524)
|.-+++.+++|+|||.. .++. +......+++++.
T Consensus 26 G~~~~I~G~~G~GKT~la~~~~~~~~~~~~~~~~~~s~ 63 (242)
T d1tf7a1 26 GRSTLVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTF 63 (242)
T ss_dssp TSEEEEEESTTSSHHHHHHHHHHHHHHHHCCCEEEEES
T ss_pred CeEEEEEeCCCCCHHHHHHHHHHHHHHhcCCCcccccc
Confidence 45688999999999954 3333 2233556777764
No 132
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=67.51 E-value=3 Score=33.49 Aligned_cols=13 Identities=23% Similarity=0.161 Sum_probs=11.3
Q ss_pred EEEEcCCCChHHH
Q 009843 56 CFCLMPTGGGKSM 68 (524)
Q Consensus 56 ~lv~apTGsGKTl 68 (524)
+.+.++.|||||.
T Consensus 5 i~itG~~GSGKTT 17 (170)
T d1np6a_ 5 LAFAAWSGTGKTT 17 (170)
T ss_dssp EEEECCTTSCHHH
T ss_pred EEEEcCCCCCHHH
Confidence 5688999999994
No 133
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=67.16 E-value=1.9 Score=37.41 Aligned_cols=23 Identities=22% Similarity=0.275 Sum_probs=17.1
Q ss_pred HHHHHcC-----CCEEEEcCCCChHHHH
Q 009843 47 IQAVLSG-----RDCFCLMPTGGGKSMC 69 (524)
Q Consensus 47 i~~~l~g-----~d~lv~apTGsGKTl~ 69 (524)
+..++.| +-+++.+|+|+|||.-
T Consensus 25 LD~ll~GGlp~G~~~li~G~pGsGKT~~ 52 (254)
T d1pzna2 25 LDKLLGGGIETQAITEVFGEFGSGKTQL 52 (254)
T ss_dssp HHHHHTSSEESSEEEEEEESTTSSHHHH
T ss_pred HHHhhcCCccCCEEEEEEcCCCCCHHHH
Confidence 4455554 5688999999999953
No 134
>d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]}
Probab=66.90 E-value=1.9 Score=40.24 Aligned_cols=24 Identities=33% Similarity=0.520 Sum_probs=18.8
Q ss_pred HHHHHcCCC--EEEEcCCCChHHHHH
Q 009843 47 IQAVLSGRD--CFCLMPTGGGKSMCY 70 (524)
Q Consensus 47 i~~~l~g~d--~lv~apTGsGKTl~~ 70 (524)
++.+++|.+ +++.++||+|||.+.
T Consensus 79 v~~~l~G~n~ti~aYGqTgSGKT~Tm 104 (349)
T d2zfia1 79 LQHAFEGYNVCIFAYGQTGAGKSYTM 104 (349)
T ss_dssp HHHHHTTCCEEEEEECSTTSSHHHHH
T ss_pred HHHHHhccCceeeeeccCCCCCceee
Confidence 455678876 577899999999774
No 135
>d1tq1a_ c.46.1.3 (A:) Thiosulfate sulfurtransferase/Senescence-associated protein {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=66.87 E-value=1.9 Score=33.21 Aligned_cols=38 Identities=16% Similarity=0.156 Sum_probs=32.8
Q ss_pred CCccEEEEeCccccHHHHHHHHHhCCC-ceEEEcCCCCH
Q 009843 257 GDTCAIVYCLERTTCDELSAYLSAGGI-SCAAYHAGLND 294 (524)
Q Consensus 257 ~~~~~IIf~~s~~~~e~l~~~L~~~g~-~~~~~h~~l~~ 294 (524)
++.++||||.+-..+...+..|.+.|+ ++..+.||+..
T Consensus 71 ~~~~iv~~C~~G~rs~~a~~~L~~~G~~nv~~l~GG~~~ 109 (119)
T d1tq1a_ 71 QSDNIIVGCQSGGRSIKATTDLLHAGFTGVKDIVGGYSA 109 (119)
T ss_dssp TTSSEEEEESSCSHHHHHHHHHHHHHCCSEEEEECCHHH
T ss_pred CCcEEEEEcCCcCcHHHHHHHHHhcccCCeEEecChHHH
Confidence 456899999998889999999999998 58889999853
No 136
>d1c7na_ c.67.1.3 (A:) Cystalysin {Treponema denticola [TaxId: 158]}
Probab=66.80 E-value=3.9 Score=38.32 Aligned_cols=143 Identities=13% Similarity=0.113 Sum_probs=73.0
Q ss_pred CCCChhHHHHHHHHH-----HcCCCCCCHHHHHHHHHHHc---C-----CCEEEEcCCCChHHHHHH-HHHhcC-CCeEE
Q 009843 18 KPLHEKEALVKLLRW-----HFGHAQFRDKQLDAIQAVLS---G-----RDCFCLMPTGGGKSMCYQ-IPALAK-PGIVL 82 (524)
Q Consensus 18 ~~~~~~~~~~~~l~~-----~fg~~~~r~~Q~~~i~~~l~---g-----~d~lv~apTGsGKTl~~~-lp~l~~-~~~~l 82 (524)
.+++.++.+.+++.+ .+||....+.-++++...++ | .++++ |.++....++ +-++.. +..++
T Consensus 41 pdf~~p~~v~~al~~~~~~~~~~Y~~g~~~Lr~aia~~~~~~~g~~~~~~~I~v---t~G~~~al~~~~~~~~~pgd~vi 117 (394)
T d1c7na_ 41 MEFKNPPELIEGLKKYLDETVLGYTGPTEEYKKTVKKWMKDRHQWDIQTDWIIN---TAGVVPAVFNAVREFTKPGDGVI 117 (394)
T ss_dssp CSSCCCHHHHHHHHHHHHHCCCSSBCCCHHHHHHHHHHHHHHHCCCCCGGGEEE---ESSHHHHHHHHHHHHCCTTCEEE
T ss_pred CCCCCCHHHHHHHHHHHhCCCcCCCCCCHHHHHHHHHHHHHhcCCCCCCcceEe---eccchhhhhhhhccccccccccc
Confidence 345666766666654 35777667766777766553 2 34555 4455665543 445555 45677
Q ss_pred EeCcHHHHHHHHHHHHHHcCCceeEec---cC----CCHHHHHHHHHHhhcCCCcccE-EEeCcc----cccChhhHHHH
Q 009843 83 VVSPLIALMENQVIGLKEKGIAGEFLS---ST----QTMQVKTKIYEDLDSGKPSLRL-LYVTPE----LTATPGFMSKL 150 (524)
Q Consensus 83 vl~P~~~L~~q~~~~l~~~gi~~~~~~---~~----~~~~~~~~~~~~l~~~~~~~~l-l~~tpe----~v~t~~~~~~l 150 (524)
+..|.-.-...... ..|....... .. ..... ....... +..++ ++++|. .+.+...+..+
T Consensus 118 ~~~p~~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~d~~~----~~~~~~~-~~~~~i~l~~P~NPTG~v~s~~~l~~l 189 (394)
T d1c7na_ 118 IITPVYYPFFMAIK---NQERKIIECELLEKDGYYTIDFQK----LEKLSKD-KNNKALLFCSPHNPVGRVWKKDELQKI 189 (394)
T ss_dssp ECSSCCTHHHHHHH---TTTCEEEECCCEEETTEEECCHHH----HHHHHTC-TTEEEEEEESSBTTTTBCCCHHHHHHH
T ss_pred cccCcccchhhHHh---hhhhcccccccccccccccchhhh----hhhhhcc-ccceEEEecccccccceeccHHHhhhh
Confidence 77787655443332 3333222111 11 11111 1111111 22444 456665 55566666666
Q ss_pred HhhhccCCccEEEEeccccccc
Q 009843 151 KKIHSRGLLNLVAIDEAHCISS 172 (524)
Q Consensus 151 ~~~~~~~~l~~iViDEaH~i~~ 172 (524)
.+...... -+||.||++.-..
T Consensus 190 ~~~a~~~~-~~ii~De~Y~~~~ 210 (394)
T d1c7na_ 190 KDIVLKSD-LMLWSDEIHFDLI 210 (394)
T ss_dssp HHHHHHSS-CEEEEECTTTTCB
T ss_pred hccccccc-eeEeccccccccc
Confidence 55443322 2688999986543
No 137
>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]}
Probab=66.60 E-value=1.6 Score=41.01 Aligned_cols=25 Identities=28% Similarity=0.521 Sum_probs=19.9
Q ss_pred HHHHHHcCCC--EEEEcCCCChHHHHH
Q 009843 46 AIQAVLSGRD--CFCLMPTGGGKSMCY 70 (524)
Q Consensus 46 ~i~~~l~g~d--~lv~apTGsGKTl~~ 70 (524)
.++.+++|.+ +++.++||+|||.+.
T Consensus 66 lv~~~l~G~n~~i~aYGqTGSGKTyTm 92 (364)
T d1sdma_ 66 LVQSAVDGYNVCIFAYGQTGSGKTFTI 92 (364)
T ss_dssp HHHHHHTTCEEEEEEECSTTSSHHHHH
T ss_pred HHHHHhcCCceeeeccccCCCCccccc
Confidence 4677788876 577789999999774
No 138
>d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]}
Probab=66.54 E-value=1.8 Score=40.67 Aligned_cols=24 Identities=33% Similarity=0.721 Sum_probs=18.3
Q ss_pred HHHHHcCCC--EEEEcCCCChHHHHH
Q 009843 47 IQAVLSGRD--CFCLMPTGGGKSMCY 70 (524)
Q Consensus 47 i~~~l~g~d--~lv~apTGsGKTl~~ 70 (524)
++.+++|.+ +++.++||+|||.+.
T Consensus 106 v~~~l~G~n~tifaYGqTGSGKTyTm 131 (362)
T d1v8ka_ 106 VQTIFEGGKATCFAYGQTGSGKTHTM 131 (362)
T ss_dssp HHHHHTTCEEEEEEEESTTSSHHHHH
T ss_pred HHHHHhccCceEEeeccCCCCCceee
Confidence 455678876 467789999999874
No 139
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=65.97 E-value=2.4 Score=34.22 Aligned_cols=19 Identities=21% Similarity=0.022 Sum_probs=14.7
Q ss_pred CCCEEEEcCCCChHHHHHH
Q 009843 53 GRDCFCLMPTGGGKSMCYQ 71 (524)
Q Consensus 53 g~d~lv~apTGsGKTl~~~ 71 (524)
.+=+++.+|+|+|||...-
T Consensus 3 ~kiI~l~G~~GsGKsTva~ 21 (178)
T d1qhxa_ 3 TRMIILNGGSSAGKSGIVR 21 (178)
T ss_dssp CCEEEEECCTTSSHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHH
Confidence 4557788999999996653
No 140
>d1veca_ c.37.1.19 (A:) DEAD box RNA helicase rck/p54 {Human (Homo sapiens) [TaxId: 9606]}
Probab=65.93 E-value=5.8 Score=33.49 Aligned_cols=71 Identities=18% Similarity=0.120 Sum_probs=48.0
Q ss_pred CCccEEEEeCccccHHHHHHHHHhC-----CCceEEEcCCCCHHHHHHHHHHHhcCCCcEEEEccc------ccccccCC
Q 009843 257 GDTCAIVYCLERTTCDELSAYLSAG-----GISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVA------FGMGIDRK 325 (524)
Q Consensus 257 ~~~~~IIf~~s~~~~e~l~~~L~~~-----g~~~~~~h~~l~~~~R~~~~~~f~~g~~~VlVaT~a------~~~GiD~p 325 (524)
.+..++|.+++++-+.++.+.+... +..+...+|+.....+... .....+|||+|+- -...++..
T Consensus 70 ~~~~~lil~pt~el~~q~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~----l~~~~~ivv~TPgrl~~~~~~~~~~~~ 145 (206)
T d1veca_ 70 DNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMR----LDDTVHVVIATPGRILDLIKKGVAKVD 145 (206)
T ss_dssp CSCCEEEECSCHHHHHHHHHHHHHHTTTSSSCCEEEECSSSCHHHHHHH----TTSCCSEEEECHHHHHHHHHTTCSCCT
T ss_pred cCcceEEEeecchhhHHHHHHHHHHhhcccCcccccccCCccHHHHHHH----HHhccCeEEeCCccccccccchhcccc
Confidence 4557999999999999988877642 4567777888776554333 2467899999962 11124455
Q ss_pred CccEEE
Q 009843 326 DVRLVC 331 (524)
Q Consensus 326 ~v~~VI 331 (524)
+++++|
T Consensus 146 ~l~~lV 151 (206)
T d1veca_ 146 HVQMIV 151 (206)
T ss_dssp TCCEEE
T ss_pred ccceEE
Confidence 566655
No 141
>d1gmxa_ c.46.1.3 (A:) Sulfurtransferase GlpE {Escherichia coli [TaxId: 562]}
Probab=65.73 E-value=3.7 Score=30.76 Aligned_cols=46 Identities=20% Similarity=0.370 Sum_probs=36.2
Q ss_pred HHHHHHh-cCCccEEEEeCccccHHHHHHHHHhCCCc-eEEEcCCCCH
Q 009843 249 LCSVLKA-NGDTCAIVYCLERTTCDELSAYLSAGGIS-CAAYHAGLND 294 (524)
Q Consensus 249 l~~~l~~-~~~~~~IIf~~s~~~~e~l~~~L~~~g~~-~~~~h~~l~~ 294 (524)
+...+.. .++.++|+||.+-..+...+..|.+.|+. +..+.||+..
T Consensus 48 l~~~~~~~~~~~~ivv~c~~g~rs~~~a~~L~~~G~~~v~~l~GG~~~ 95 (108)
T d1gmxa_ 48 LGAFMRDNDFDTPVMVMCYHGNSSKGAAQYLLQQGYDVVYSIDGGFEA 95 (108)
T ss_dssp HHHHHHHSCTTSCEEEECSSSSHHHHHHHHHHHHTCSSEEEETTHHHH
T ss_pred HHHHhhhccccCcccccCCCChHHHHHHHHHHHcCCCCEEEEcChHHH
Confidence 3344444 35678999999999999999999999984 8888998754
No 142
>d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]}
Probab=65.67 E-value=1.7 Score=40.41 Aligned_cols=25 Identities=28% Similarity=0.502 Sum_probs=19.3
Q ss_pred HHHHHHcCCC--EEEEcCCCChHHHHH
Q 009843 46 AIQAVLSGRD--CFCLMPTGGGKSMCY 70 (524)
Q Consensus 46 ~i~~~l~g~d--~lv~apTGsGKTl~~ 70 (524)
.++.+++|.+ +++.++||+|||.+.
T Consensus 72 lv~~~l~G~n~~i~aYGqtgSGKTyTm 98 (345)
T d1x88a1 72 ILDEVIMGYNCTIFAYGQTGTGKTFTM 98 (345)
T ss_dssp HHHHHHTTCEEEEEEEECTTSSHHHHH
T ss_pred hHHHHhccCCceEEeeeeccccceEEe
Confidence 4566678876 567789999999864
No 143
>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=65.01 E-value=1.9 Score=40.55 Aligned_cols=25 Identities=36% Similarity=0.545 Sum_probs=19.8
Q ss_pred HHHHHHcCCC--EEEEcCCCChHHHHH
Q 009843 46 AIQAVLSGRD--CFCLMPTGGGKSMCY 70 (524)
Q Consensus 46 ~i~~~l~g~d--~lv~apTGsGKTl~~ 70 (524)
.++.+++|.+ +++.++||+|||.+.
T Consensus 116 lv~~vl~G~n~ti~aYGqtGSGKT~Tm 142 (368)
T d2ncda_ 116 LIQSALDGYNICIFAYGQTGSGKTYTM 142 (368)
T ss_dssp HHHHHHTTCEEEEEEECSTTSSHHHHH
T ss_pred HHHHHhcccceeEEeeccCCCccceEe
Confidence 4566788876 577889999999763
No 144
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=64.47 E-value=2 Score=35.09 Aligned_cols=21 Identities=19% Similarity=0.140 Sum_probs=16.5
Q ss_pred CCEEEEcCCCChHHHHHHHHH
Q 009843 54 RDCFCLMPTGGGKSMCYQIPA 74 (524)
Q Consensus 54 ~d~lv~apTGsGKTl~~~lp~ 74 (524)
+.+++.+++|+|||....+-+
T Consensus 3 ~~Iil~G~~GsGKSTia~~LA 23 (170)
T d1e6ca_ 3 EPIFMVGARGCGMTTVGRELA 23 (170)
T ss_dssp CCEEEESCTTSSHHHHHHHHH
T ss_pred CCEEEECCCCCCHHHHHHHHH
Confidence 467889999999998765443
No 145
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=64.20 E-value=1.9 Score=35.88 Aligned_cols=20 Identities=30% Similarity=0.358 Sum_probs=15.8
Q ss_pred CCCEEEEcCCCChHHHHHHH
Q 009843 53 GRDCFCLMPTGGGKSMCYQI 72 (524)
Q Consensus 53 g~d~lv~apTGsGKTl~~~l 72 (524)
|-.+++.+|+|||||.....
T Consensus 3 ~~riil~G~pGSGKsT~a~~ 22 (190)
T d1ak2a1 3 GVRAVLLGPPGAGKGTQAPK 22 (190)
T ss_dssp CCEEEEECCTTSSHHHHHHH
T ss_pred ccEEEEECCCCCCHHHHHHH
Confidence 45678899999999976544
No 146
>d1gm5a4 c.37.1.19 (A:550-755) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=63.65 E-value=3.2 Score=35.44 Aligned_cols=106 Identities=14% Similarity=0.208 Sum_probs=67.4
Q ss_pred HHHHHHHHHhcCCCeEEEeCcHHHHHH--------HHHHHHHHc---CCceeEeccCCCHHHHHHHHHHhhcCCCcccEE
Q 009843 66 KSMCYQIPALAKPGIVLVVSPLIALME--------NQVIGLKEK---GIAGEFLSSTQTMQVKTKIYEDLDSGKPSLRLL 134 (524)
Q Consensus 66 KTl~~~lp~l~~~~~~lvl~P~~~L~~--------q~~~~l~~~---gi~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ll 134 (524)
|-..++.-.+.+++.+.||+|+++=.+ +..+.+.+. +.+...+++.++..++..+......++ +++|
T Consensus 17 ~v~~~I~~el~~g~QvyvVcP~Ieese~~~~~~~~e~~~~l~~~~~p~~~v~~lHG~m~~~eke~~m~~F~~g~--~~iL 94 (206)
T d1gm5a4 17 EVYEFVRQEVMRGGQAFIVYPLIEESDKLNVKSAVEMYEYLSKEVFPEFKLGLMHGRLSQEEKDRVMLEFAEGR--YDIL 94 (206)
T ss_dssp HHHHHHHHHTTTSCCBCCBCCCC--------CHHHHHHHSGGGSCC---CBCCCCSSSCCSCSHHHHHHHTTTS--SSBC
T ss_pred HHHHHHHHHHHcCCCEEEEEeeecccccccchhhHHHHHHHHHhcCCCCeEEEEeecccHHHHHHHHHHHHCCC--EEEE
Confidence 334444555677899999999874322 233333332 456778999999999999999999987 7777
Q ss_pred EeCcccccChhhHHHHHhhhccCCccEEEEeccccccccCCCCHHHHHHHHHHHHhCC
Q 009843 135 YVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYLP 192 (524)
Q Consensus 135 ~~tpe~v~t~~~~~~l~~~~~~~~l~~iViDEaH~i~~~g~~fr~~~~~l~~l~~~~~ 192 (524)
++|..+-.- .+......+|+..|+...- .+|..++-+..
T Consensus 95 VaTtViE~G----------IDip~a~~iii~~a~~fgl---------sqlhQlrGRvG 133 (206)
T d1gm5a4 95 VSTTVIEVG----------IDVPRANVMVIENPERFGL---------AQLHQLRGRVG 133 (206)
T ss_dssp CCSSCCCSC----------SCCTTCCEEEBCSCSSSCT---------THHHHHHHTSC
T ss_pred EEehhhhcc----------ccccCCcEEEEEccCCccH---------HHHHhhhhhee
Confidence 777543211 2233478899999988532 45566665543
No 147
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=61.98 E-value=1.6 Score=40.23 Aligned_cols=16 Identities=38% Similarity=0.447 Sum_probs=13.2
Q ss_pred EEEEcCCCChHHHHHH
Q 009843 56 CFCLMPTGGGKSMCYQ 71 (524)
Q Consensus 56 ~lv~apTGsGKTl~~~ 71 (524)
+++.+|||+|||..+.
T Consensus 56 ~lf~Gp~G~GKt~lak 71 (315)
T d1qvra3 56 FLFLGPTGVGKTELAK 71 (315)
T ss_dssp EEEBSCSSSSHHHHHH
T ss_pred EEEECCCcchHHHHHH
Confidence 5778999999997653
No 148
>d1urha2 c.46.1.2 (A:149-268) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]}
Probab=61.94 E-value=5 Score=30.39 Aligned_cols=38 Identities=18% Similarity=0.172 Sum_probs=32.6
Q ss_pred cCCccEEEEeCccccHHHHHHHHHhCCCc-eEEEcCCCC
Q 009843 256 NGDTCAIVYCLERTTCDELSAYLSAGGIS-CAAYHAGLN 293 (524)
Q Consensus 256 ~~~~~~IIf~~s~~~~e~l~~~L~~~g~~-~~~~h~~l~ 293 (524)
....++|+||.+=..+-..+..|+..|+. +..|.|++.
T Consensus 80 ~~~~~ii~yC~sG~~A~~~~~~L~~lG~~~v~~y~Gs~~ 118 (120)
T d1urha2 80 SYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWS 118 (120)
T ss_dssp CSSSCEEEECCSSSTHHHHHHHHHHTTCSSCEEECCSCC
T ss_pred CccCceEEEccchhHHHHHHHHHHHcCCCCceEcCCChh
Confidence 34678999999988899999999999984 888999885
No 149
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=61.93 E-value=1.9 Score=35.02 Aligned_cols=19 Identities=21% Similarity=0.118 Sum_probs=15.5
Q ss_pred cCCCEEEEcCCCChHHHHH
Q 009843 52 SGRDCFCLMPTGGGKSMCY 70 (524)
Q Consensus 52 ~g~d~lv~apTGsGKTl~~ 70 (524)
+|.-+++.+++|+|||...
T Consensus 5 ~g~~I~l~G~~GsGKTTia 23 (183)
T d1m8pa3 5 QGFTIFLTGYMNSGKDAIA 23 (183)
T ss_dssp CCEEEEEECSTTSSHHHHH
T ss_pred CCeEEEEECCCCCCHHHHH
Confidence 4556789999999999765
No 150
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=60.91 E-value=2.7 Score=35.07 Aligned_cols=22 Identities=18% Similarity=0.262 Sum_probs=17.2
Q ss_pred HHcCCCEEEEcCCCChHHHHHH
Q 009843 50 VLSGRDCFCLMPTGGGKSMCYQ 71 (524)
Q Consensus 50 ~l~g~d~lv~apTGsGKTl~~~ 71 (524)
+.+++-+++.+|+|||||....
T Consensus 5 ~~~~~iI~l~G~pGSGKsT~a~ 26 (194)
T d3adka_ 5 LKKSKIIFVVGGPGSGKGTQCE 26 (194)
T ss_dssp HHTSCEEEEEECTTSSHHHHHH
T ss_pred ccCCcEEEEECCCCCCHHHHHH
Confidence 4456678899999999997543
No 151
>d1g5ta_ c.37.1.11 (A:) ATP:corrinoid adenosyltransferase CobA {Salmonella typhimurium [TaxId: 90371]}
Probab=60.61 E-value=10 Score=30.61 Aligned_cols=52 Identities=19% Similarity=0.321 Sum_probs=35.2
Q ss_pred hhhccCCccEEEEeccccccccCCCCHHHHHHHHHHHHhCCCCCEEEEeccCChh
Q 009843 152 KIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPK 206 (524)
Q Consensus 152 ~~~~~~~l~~iViDEaH~i~~~g~~fr~~~~~l~~l~~~~~~~~ii~lSAT~~~~ 206 (524)
.....+..+++|+||+-....+|. -+. ..+..+.+..|.--=+.||+--.|.
T Consensus 88 ~~~~~~~~dllILDEi~~Ai~~gl--i~~-~~v~~ll~~rp~~~evVlTGr~~p~ 139 (157)
T d1g5ta_ 88 RMLADPLLDMVVLDELTYMVAYDY--LPL-EEVISALNARPGHQTVIITGRGCHR 139 (157)
T ss_dssp HHTTCTTCSEEEEETHHHHHHTTS--SCH-HHHHHHHHTSCTTCEEEEECSSCCH
T ss_pred HHhhcCccCEEeHHHHHHHHHcCC--CCH-HHHHHHHHhCCCCCEEEEECCCCCH
Confidence 344556699999999999888773 222 3444555666766677888875554
No 152
>d2p6ra4 c.37.1.19 (A:203-403) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=60.45 E-value=11 Score=31.55 Aligned_cols=35 Identities=14% Similarity=0.316 Sum_probs=27.0
Q ss_pred eeEeccCCCHHHHHHHHHHhhcCCCcccEEEeCcccc
Q 009843 105 GEFLSSTQTMQVKTKIYEDLDSGKPSLRLLYVTPELT 141 (524)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~ll~~tpe~v 141 (524)
+++.++..+...+..+......+. ++++++|..+.
T Consensus 97 Ia~hh~~l~~~~r~~ie~~f~~g~--i~vlvaT~~l~ 131 (201)
T d2p6ra4 97 AAFHHAGLLNGQRRVVEDAFRRGN--IKVVVATPTLA 131 (201)
T ss_dssp CCEECTTSCHHHHHHHHHHHHTTS--CCEEEECSTTT
T ss_pred HHHHHHHhhhhhHHHHHHHHhCCC--ceEEEechHHH
Confidence 456788888888888888888776 88888887643
No 153
>d1wrba1 c.37.1.19 (A:164-401) putative ATP-dependent RNA helicase VlgB {Flatworm (Dugesia japonica) [TaxId: 6161]}
Probab=60.15 E-value=8.5 Score=33.26 Aligned_cols=71 Identities=8% Similarity=0.050 Sum_probs=48.7
Q ss_pred CccEEEEeCccccHHHHHHHHHh----CCCceEEEcCCCCHHHHHHHHHHHhcCCCcEEEEccc-c-----cccccCCCc
Q 009843 258 DTCAIVYCLERTTCDELSAYLSA----GGISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVA-F-----GMGIDRKDV 327 (524)
Q Consensus 258 ~~~~IIf~~s~~~~e~l~~~L~~----~g~~~~~~h~~l~~~~R~~~~~~f~~g~~~VlVaT~a-~-----~~GiD~p~v 327 (524)
...++|.+++++-|.++.+.+.. .++.+..+.|+.....+.. ......+|||+|+- + ...+++.++
T Consensus 98 ~~~alil~pt~el~~q~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~ivV~TP~~l~~~~~~~~~~l~~v 173 (238)
T d1wrba1 98 YPKCLILAPTRELAIQILSESQKFSLNTPLRSCVVYGGADTHSQIR----EVQMGCHLLVATPGRLVDFIEKNKISLEFC 173 (238)
T ss_dssp CCSEEEECSSHHHHHHHHHHHHHHHTTSSCCEEEECSSSCSHHHHH----HHSSCCSEEEECHHHHHHHHHTTSBCCTTC
T ss_pred CceEEEeccchhhhcchheeeeecccCCCcEEEEEeccchhhHHHh----hcccCCceeecCHHHHHhHHccCceecccc
Confidence 45799999999999998876654 3678888888776554322 34567899999972 1 123455566
Q ss_pred cEEEE
Q 009843 328 RLVCH 332 (524)
Q Consensus 328 ~~VI~ 332 (524)
+++|.
T Consensus 174 ~~lVi 178 (238)
T d1wrba1 174 KYIVL 178 (238)
T ss_dssp CEEEE
T ss_pred ceeee
Confidence 66553
No 154
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=59.96 E-value=2.2 Score=35.46 Aligned_cols=18 Identities=11% Similarity=0.148 Sum_probs=14.6
Q ss_pred CEEEEcCCCChHHHHHHH
Q 009843 55 DCFCLMPTGGGKSMCYQI 72 (524)
Q Consensus 55 d~lv~apTGsGKTl~~~l 72 (524)
.+++.||+|||||.....
T Consensus 5 ~I~i~GppGsGKsT~a~~ 22 (189)
T d1zaka1 5 KVMISGAPASGKGTQCEL 22 (189)
T ss_dssp CEEEEESTTSSHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHH
Confidence 578999999999976543
No 155
>d1qkka_ c.23.1.1 (A:) Transcriptional regulatory protein DctD, receiver domain {Sinorhizobium meliloti [TaxId: 382]}
Probab=59.76 E-value=34 Score=26.26 Aligned_cols=46 Identities=13% Similarity=0.253 Sum_probs=31.7
Q ss_pred CCccEEEEeccccccccCCCCHHHHHHHHHHHHhCCCCCEEEEeccCChhHHH
Q 009843 157 GLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQK 209 (524)
Q Consensus 157 ~~l~~iViDEaH~i~~~g~~fr~~~~~l~~l~~~~~~~~ii~lSAT~~~~~~~ 209 (524)
..++++++| .+ +.+++ -+.-+..++...|++|+|++||....+...
T Consensus 43 ~~~dlil~D-~~-mP~~~-----G~el~~~lr~~~~~~pvI~lT~~~~~~~~~ 88 (140)
T d1qkka_ 43 DFAGIVISD-IR-MPGMD-----GLALFRKILALDPDLPMILVTGHGDIPMAV 88 (140)
T ss_dssp TCCSEEEEE-SC-CSSSC-----HHHHHHHHHHHCTTSCEEEEECGGGHHHHH
T ss_pred cCcchHHHh-hc-cCCCC-----HHHHHHHHHHhCCCCcEEEEECCCCHHHHH
Confidence 357889988 33 43321 135567778888999999999987665433
No 156
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=59.67 E-value=2.3 Score=35.52 Aligned_cols=18 Identities=28% Similarity=0.257 Sum_probs=14.2
Q ss_pred CEEEEcCCCChHHHHHHH
Q 009843 55 DCFCLMPTGGGKSMCYQI 72 (524)
Q Consensus 55 d~lv~apTGsGKTl~~~l 72 (524)
-+++.+|+|||||.....
T Consensus 8 iI~i~G~pGSGKsT~a~~ 25 (194)
T d1qf9a_ 8 VVFVLGGPGSGKGTQCAN 25 (194)
T ss_dssp EEEEEESTTSSHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHH
Confidence 368899999999975543
No 157
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=59.10 E-value=18 Score=29.49 Aligned_cols=70 Identities=16% Similarity=0.062 Sum_probs=50.2
Q ss_pred CCccEEEEeCccccHHHHHHHHHhC----CCceEEEcCCCCHHHHHHHHHHHhcCCCcEEEEcccccc------cccCCC
Q 009843 257 GDTCAIVYCLERTTCDELSAYLSAG----GISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGM------GIDRKD 326 (524)
Q Consensus 257 ~~~~~IIf~~s~~~~e~l~~~L~~~----g~~~~~~h~~l~~~~R~~~~~~f~~g~~~VlVaT~a~~~------GiD~p~ 326 (524)
.+.++++.++++.-+++.++.+.+. +..+..+|++....+|...... .+++++|..... .+...+
T Consensus 51 ~~~~il~i~P~~~L~~q~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-----~~i~i~t~~~~~~~~~~~~~~~~~ 125 (200)
T d1wp9a1 51 YGGKVLMLAPTKPLVLQHAESFRRLFNLPPEKIVALTGEKSPEERSKAWAR-----AKVIVATPQTIENDLLAGRISLED 125 (200)
T ss_dssp SCSCEEEECSSHHHHHHHHHHHHHHBCSCGGGEEEECSCSCHHHHHHHHHH-----CSEEEECHHHHHHHHHTTSCCTTS
T ss_pred cCCcEEEEcCchHHHHHHHHHHHHhhcccccceeeeecccchhHHHHhhhc-----ccccccccchhHHHHhhhhhhccc
Confidence 4567999999999999988888764 5678899999998888766543 468888863322 123345
Q ss_pred ccEEE
Q 009843 327 VRLVC 331 (524)
Q Consensus 327 v~~VI 331 (524)
+.+||
T Consensus 126 ~~~vI 130 (200)
T d1wp9a1 126 VSLIV 130 (200)
T ss_dssp CSEEE
T ss_pred cceEE
Confidence 66665
No 158
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=58.78 E-value=2.7 Score=34.21 Aligned_cols=15 Identities=20% Similarity=0.149 Sum_probs=12.9
Q ss_pred CEEEEcCCCChHHHH
Q 009843 55 DCFCLMPTGGGKSMC 69 (524)
Q Consensus 55 d~lv~apTGsGKTl~ 69 (524)
.+++.+|+|+|||..
T Consensus 2 ki~I~G~~G~GKSTL 16 (178)
T d1ye8a1 2 KIIITGEPGVGKTTL 16 (178)
T ss_dssp EEEEECCTTSSHHHH
T ss_pred EEEEECCCCcHHHHH
Confidence 378999999999964
No 159
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=58.56 E-value=2.7 Score=33.93 Aligned_cols=17 Identities=24% Similarity=0.190 Sum_probs=13.6
Q ss_pred CEEEEcCCCChHHHHHH
Q 009843 55 DCFCLMPTGGGKSMCYQ 71 (524)
Q Consensus 55 d~lv~apTGsGKTl~~~ 71 (524)
=+++.+|+|+|||....
T Consensus 8 iivl~G~~GsGKsT~a~ 24 (171)
T d1knqa_ 8 IYVLMGVSGSGKSAVAS 24 (171)
T ss_dssp EEEEECSTTSCHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 36778999999997653
No 160
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=58.41 E-value=1.6 Score=36.17 Aligned_cols=18 Identities=17% Similarity=0.172 Sum_probs=14.2
Q ss_pred CCEEEEcCCCChHHHHHH
Q 009843 54 RDCFCLMPTGGGKSMCYQ 71 (524)
Q Consensus 54 ~d~lv~apTGsGKTl~~~ 71 (524)
.-+++.+++|+|||..+.
T Consensus 20 ~vI~L~G~pGSGKTTiAk 37 (195)
T d1x6va3 20 CTVWLTGLSGAGKTTVSM 37 (195)
T ss_dssp EEEEEESSCHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHH
Confidence 456788999999997654
No 161
>d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]}
Probab=58.33 E-value=2.3 Score=39.44 Aligned_cols=25 Identities=32% Similarity=0.537 Sum_probs=18.5
Q ss_pred HHHHHcCCC--EEEEcCCCChHHHHHH
Q 009843 47 IQAVLSGRD--CFCLMPTGGGKSMCYQ 71 (524)
Q Consensus 47 i~~~l~g~d--~lv~apTGsGKTl~~~ 71 (524)
++.+++|.+ +++.++||+|||.+..
T Consensus 75 v~~~l~G~n~~i~aYGqtgSGKT~T~~ 101 (342)
T d1f9va_ 75 VQSSLDGYNVCIFAYGQTGSGKTFTML 101 (342)
T ss_dssp HGGGGGTCCEEEEEECCTTSSHHHHHH
T ss_pred hcchhcccccceeeeeccCCccccccc
Confidence 344557876 5678999999998753
No 162
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=58.08 E-value=2.7 Score=34.39 Aligned_cols=17 Identities=18% Similarity=0.202 Sum_probs=14.1
Q ss_pred CEEEEcCCCChHHHHHH
Q 009843 55 DCFCLMPTGGGKSMCYQ 71 (524)
Q Consensus 55 d~lv~apTGsGKTl~~~ 71 (524)
.+++.+|+|||||....
T Consensus 2 ~I~i~G~pGSGKsT~a~ 18 (182)
T d1zina1 2 NLVLMGLPGAGKGTQAE 18 (182)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 37899999999997654
No 163
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=57.65 E-value=2.8 Score=34.54 Aligned_cols=18 Identities=17% Similarity=0.139 Sum_probs=14.3
Q ss_pred CEEEEcCCCChHHHHHHH
Q 009843 55 DCFCLMPTGGGKSMCYQI 72 (524)
Q Consensus 55 d~lv~apTGsGKTl~~~l 72 (524)
.+++.+|+|||||.....
T Consensus 2 ~I~i~G~pGSGKsT~a~~ 19 (182)
T d1s3ga1 2 NIVLMGLPGAGKGTQADR 19 (182)
T ss_dssp EEEEECSTTSSHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHH
Confidence 378899999999975543
No 164
>d1qdea_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=57.39 E-value=5.6 Score=33.82 Aligned_cols=72 Identities=14% Similarity=0.056 Sum_probs=43.8
Q ss_pred CCccEEEEeCccccHHHHHHHHHhC----CCceEEEcCCCCHHHHHHHHHHHhcCCCcEEEEccc------ccccccCCC
Q 009843 257 GDTCAIVYCLERTTCDELSAYLSAG----GISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVA------FGMGIDRKD 326 (524)
Q Consensus 257 ~~~~~IIf~~s~~~~e~l~~~L~~~----g~~~~~~h~~l~~~~R~~~~~~f~~g~~~VlVaT~a------~~~GiD~p~ 326 (524)
.+..++|.++|++.+.++...+... ++.+...+++-+..++... -...+|+|+|+. ...++++.+
T Consensus 77 ~~~~~lil~pt~el~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~IvI~TP~~l~~~~~~~~~~l~~ 151 (212)
T d1qdea_ 77 KAPQALMLAPTRELALQIQKVVMALAFHMDIKVHACIGGTSFVEDAEG-----LRDAQIVVGTPGRVFDNIQRRRFRTDK 151 (212)
T ss_dssp CSCCEEEECSSHHHHHHHHHHHHHHTTTSCCCEEEECC---------------CTTCSEEEECHHHHHHHHHTTSSCCTT
T ss_pred CCcceEEEcccHHHhhhhhhhhcccccccccceeeEeeccchhHHHHH-----hcCCcEEEECCCccccccccCceecCc
Confidence 3457999999999999988877653 4556666666554433222 124689999962 233566777
Q ss_pred ccEEEEe
Q 009843 327 VRLVCHF 333 (524)
Q Consensus 327 v~~VI~~ 333 (524)
++++|.=
T Consensus 152 l~~lVlD 158 (212)
T d1qdea_ 152 IKMFILD 158 (212)
T ss_dssp CCEEEEE
T ss_pred ceEEeeh
Confidence 8877743
No 165
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=57.38 E-value=2.5 Score=36.63 Aligned_cols=17 Identities=12% Similarity=-0.179 Sum_probs=14.1
Q ss_pred CCCEEEEcCCCChHHHH
Q 009843 53 GRDCFCLMPTGGGKSMC 69 (524)
Q Consensus 53 g~d~lv~apTGsGKTl~ 69 (524)
|+-+++.+|+|+|||..
T Consensus 37 G~~~~i~G~~GsGKT~l 53 (258)
T d1v5wa_ 37 MAITEAFGEFRTGKTQL 53 (258)
T ss_dssp SEEEEEECCTTCTHHHH
T ss_pred CEEEEEECCCCCCHHHH
Confidence 35688999999999954
No 166
>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}
Probab=57.35 E-value=33 Score=25.41 Aligned_cols=47 Identities=13% Similarity=0.189 Sum_probs=32.7
Q ss_pred CccEEEEeccccccccCCCCHHHHHHHHHHHHhCCCCCEEEEeccCChhHHHHH
Q 009843 158 LLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDV 211 (524)
Q Consensus 158 ~l~~iViDEaH~i~~~g~~fr~~~~~l~~l~~~~~~~~ii~lSAT~~~~~~~~i 211 (524)
.++++++| .+.-...| +..+..+++..|++|++++|+..........
T Consensus 46 ~~dliilD-~~mp~~~G------~e~~~~ir~~~~~~pvi~ls~~~~~~~~~~a 92 (118)
T d1u0sy_ 46 KPDIVTMD-ITMPEMNG------IDAIKEIMKIDPNAKIIVCSAMGQQAMVIEA 92 (118)
T ss_dssp CCSEEEEE-CSCGGGCH------HHHHHHHHHHCTTCCEEEEECTTCHHHHHHH
T ss_pred cCCEEEEe-cCCCCCCH------HHHHHHHHHhCCCCcEEEEEccCCHHHHHHH
Confidence 37889998 33322223 4566777888899999999998877655433
No 167
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=56.66 E-value=3 Score=34.65 Aligned_cols=16 Identities=31% Similarity=0.409 Sum_probs=13.5
Q ss_pred EEEEcCCCChHHHHHH
Q 009843 56 CFCLMPTGGGKSMCYQ 71 (524)
Q Consensus 56 ~lv~apTGsGKTl~~~ 71 (524)
+++.+|+|||||....
T Consensus 4 I~i~GppGSGKsT~a~ 19 (194)
T d1teva_ 4 VFVLGGPGAGKGTQCA 19 (194)
T ss_dssp EEEECCTTSSHHHHHH
T ss_pred EEEECCCCCCHHHHHH
Confidence 6789999999997654
No 168
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=55.86 E-value=3.1 Score=34.70 Aligned_cols=17 Identities=29% Similarity=0.360 Sum_probs=13.4
Q ss_pred EEEEcCCCChHHHHHHH
Q 009843 56 CFCLMPTGGGKSMCYQI 72 (524)
Q Consensus 56 ~lv~apTGsGKTl~~~l 72 (524)
+++.+|+|||||...-+
T Consensus 11 I~i~GppGSGKsT~a~~ 27 (196)
T d1ukza_ 11 IFVLGGPGAGKGTQCEK 27 (196)
T ss_dssp EEEECSTTSSHHHHHHH
T ss_pred EEEECCCCCCHHHHHHH
Confidence 67889999999865443
No 169
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=55.83 E-value=3.5 Score=35.25 Aligned_cols=24 Identities=21% Similarity=0.142 Sum_probs=17.6
Q ss_pred HHHHHHcC-----CCEEEEcCCCChHHHH
Q 009843 46 AIQAVLSG-----RDCFCLMPTGGGKSMC 69 (524)
Q Consensus 46 ~i~~~l~g-----~d~lv~apTGsGKTl~ 69 (524)
.+..++.| +-+++.+|+|+|||..
T Consensus 22 ~LD~ll~GGi~~G~~~li~G~pGsGKT~l 50 (251)
T d1szpa2 22 NLDTLLGGGVETGSITELFGEFRTGKSQL 50 (251)
T ss_dssp HHHHHHTSSEESSSEEEEEESTTSSHHHH
T ss_pred HHHhhhCCCCcCCeEEEEEcCCCCCHHHH
Confidence 34555544 5689999999999953
No 170
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=55.80 E-value=3.4 Score=36.34 Aligned_cols=20 Identities=15% Similarity=0.147 Sum_probs=16.7
Q ss_pred cCCCEEEEcCCCChHHHHHH
Q 009843 52 SGRDCFCLMPTGGGKSMCYQ 71 (524)
Q Consensus 52 ~g~d~lv~apTGsGKTl~~~ 71 (524)
.+..+++.+++|+||+.++.
T Consensus 22 ~~~pvlI~Ge~GtGK~~~A~ 41 (247)
T d1ny5a2 22 AECPVLITGESGVGKEVVAR 41 (247)
T ss_dssp CCSCEEEECSTTSSHHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHH
Confidence 45689999999999997654
No 171
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=55.54 E-value=4.8 Score=33.31 Aligned_cols=17 Identities=35% Similarity=0.409 Sum_probs=14.1
Q ss_pred CCEEEEcCCCChHHHHH
Q 009843 54 RDCFCLMPTGGGKSMCY 70 (524)
Q Consensus 54 ~d~lv~apTGsGKTl~~ 70 (524)
+-++++||+|+|||...
T Consensus 2 rpIvl~GpsG~GK~tl~ 18 (186)
T d1gkya_ 2 RPIVISGPSGTGKSTLL 18 (186)
T ss_dssp CCEEEECCTTSSHHHHH
T ss_pred CeEEEECCCCCCHHHHH
Confidence 45899999999999643
No 172
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=55.11 E-value=2.5 Score=36.26 Aligned_cols=18 Identities=17% Similarity=-0.034 Sum_probs=14.3
Q ss_pred CCCEEEEcCCCChHHHHH
Q 009843 53 GRDCFCLMPTGGGKSMCY 70 (524)
Q Consensus 53 g~d~lv~apTGsGKTl~~ 70 (524)
|.-+++.+++|+|||...
T Consensus 34 G~l~~i~G~~G~GKT~~~ 51 (258)
T d2i1qa2 34 QSVTEFAGVFGSGKTQIM 51 (258)
T ss_dssp TEEEEEEESTTSSHHHHH
T ss_pred CeEEEEEeCCCCCHHHHH
Confidence 355789999999999543
No 173
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=54.96 E-value=12 Score=32.03 Aligned_cols=73 Identities=8% Similarity=0.157 Sum_probs=48.2
Q ss_pred CCccEEEEeCccccHHHHHHHHHh----CCC----ceEEEcCCCCHHHHHHHHHHHhcCCCcEEEEccc-cccc-ccCCC
Q 009843 257 GDTCAIVYCLERTTCDELSAYLSA----GGI----SCAAYHAGLNDKARSSVLDDWISSRKQVVVATVA-FGMG-IDRKD 326 (524)
Q Consensus 257 ~~~~~IIf~~s~~~~e~l~~~L~~----~g~----~~~~~h~~l~~~~R~~~~~~f~~g~~~VlVaT~a-~~~G-iD~p~ 326 (524)
.+.++||.++++.-++++++.+++ .|+ .+..++++.+..++...++... ..+|+|+|.. +... .+..+
T Consensus 85 ~~~rvliv~Pt~~La~Q~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~Ilv~Tp~~l~~~~~~~~~ 162 (237)
T d1gkub1 85 KGKRCYVIFPTSLLVIQAAETIRKYAEKAGVGTENLIGYYHGRIPKREKENFMQNLR--NFKIVITTTQFLSKHYRELGH 162 (237)
T ss_dssp TSCCEEEEESCHHHHHHHHHHHHHHHTTTCCSGGGSEEECCSSCCSHHHHHHHHSGG--GCSEEEEEHHHHHHCSTTSCC
T ss_pred hcCeEEEEeccHHHHHHHHHHHHHHHHHcCCceEEEEeeeecccchhhhhhhhcccc--ccceeccChHHHHHhhhhcCC
Confidence 456899999999999999888865 233 3567778877777766655433 4579999963 2222 22344
Q ss_pred ccEEE
Q 009843 327 VRLVC 331 (524)
Q Consensus 327 v~~VI 331 (524)
+++||
T Consensus 163 ~~~vV 167 (237)
T d1gkub1 163 FDFIF 167 (237)
T ss_dssp CSEEE
T ss_pred CCEEE
Confidence 55544
No 174
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}
Probab=54.83 E-value=3.1 Score=34.12 Aligned_cols=18 Identities=22% Similarity=0.093 Sum_probs=14.3
Q ss_pred CEEEEcCCCChHHHHHHH
Q 009843 55 DCFCLMPTGGGKSMCYQI 72 (524)
Q Consensus 55 d~lv~apTGsGKTl~~~l 72 (524)
.+++.+|+|||||.....
T Consensus 2 ~I~i~G~pGSGKsT~~~~ 19 (179)
T d1e4va1 2 RIILLGAPVAGKGTQAQF 19 (179)
T ss_dssp EEEEEESTTSSHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHH
Confidence 468899999999976543
No 175
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=54.83 E-value=3.6 Score=33.29 Aligned_cols=20 Identities=25% Similarity=0.139 Sum_probs=15.5
Q ss_pred CEEEEcCCCChHHHHHHHHH
Q 009843 55 DCFCLMPTGGGKSMCYQIPA 74 (524)
Q Consensus 55 d~lv~apTGsGKTl~~~lp~ 74 (524)
.+++.++.|+|||.+..+-+
T Consensus 3 ~IvliG~~G~GKSTig~~La 22 (165)
T d2iyva1 3 KAVLVGLPGSGKSTIGRRLA 22 (165)
T ss_dssp SEEEECSTTSSHHHHHHHHH
T ss_pred cEEEECCCCCCHHHHHHHHH
Confidence 46788999999998765443
No 176
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=54.58 E-value=3.5 Score=33.96 Aligned_cols=18 Identities=33% Similarity=0.335 Sum_probs=14.7
Q ss_pred CCCEEEEcCCCChHHHHH
Q 009843 53 GRDCFCLMPTGGGKSMCY 70 (524)
Q Consensus 53 g~d~lv~apTGsGKTl~~ 70 (524)
|+=+++.+|+|+|||...
T Consensus 2 G~iivl~GpsG~GK~tl~ 19 (182)
T d1znwa1 2 GRVVVLSGPSAVGKSTVV 19 (182)
T ss_dssp CCEEEEECSTTSSHHHHH
T ss_pred CeEEEEECCCCCCHHHHH
Confidence 556789999999999653
No 177
>d1yt8a1 c.46.1.2 (A:107-242) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=53.90 E-value=5.5 Score=31.24 Aligned_cols=37 Identities=32% Similarity=0.279 Sum_probs=31.4
Q ss_pred CCccEEEEeCccccHHHHHHHHHhCCC-c-eEEEcCCCC
Q 009843 257 GDTCAIVYCLERTTCDELSAYLSAGGI-S-CAAYHAGLN 293 (524)
Q Consensus 257 ~~~~~IIf~~s~~~~e~l~~~L~~~g~-~-~~~~h~~l~ 293 (524)
+..++++||.+-..+...+..|.+.|+ + +..+.||+.
T Consensus 79 ~~~~iV~~C~~g~rs~~aa~~L~~~G~~~~V~~L~GG~~ 117 (136)
T d1yt8a1 79 PRTRVIVNCAGRTRSIIGTQSLLNAGIPNPVAALRNGTI 117 (136)
T ss_dssp TTSEEEEECSSSHHHHHHHHHHHHTTCSSCEEEETTHHH
T ss_pred ccceEEEEcCCCCchHHHHHHHHHcCCCceEEEeCCcHH
Confidence 456799999999889999999999998 3 778899863
No 178
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]}
Probab=53.23 E-value=3 Score=35.48 Aligned_cols=19 Identities=32% Similarity=0.438 Sum_probs=15.5
Q ss_pred cCCCEEEEcCCCChHHHHH
Q 009843 52 SGRDCFCLMPTGGGKSMCY 70 (524)
Q Consensus 52 ~g~d~lv~apTGsGKTl~~ 70 (524)
+|+=++++||+|+|||...
T Consensus 1 ~G~livi~GPSG~GK~tl~ 19 (205)
T d1s96a_ 1 QGTLYIVSAPSGAGKSSLI 19 (205)
T ss_dssp CCCEEEEECCTTSCHHHHH
T ss_pred CCeEEEEECCCCCCHHHHH
Confidence 3666789999999999754
No 179
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=52.96 E-value=2.5 Score=34.41 Aligned_cols=17 Identities=12% Similarity=0.051 Sum_probs=13.5
Q ss_pred CCEEEEcCCCChHHHHH
Q 009843 54 RDCFCLMPTGGGKSMCY 70 (524)
Q Consensus 54 ~d~lv~apTGsGKTl~~ 70 (524)
+-+++.||+|+|||...
T Consensus 2 kiI~i~G~~GsGKsT~~ 18 (190)
T d1khta_ 2 KVVVVTGVPGVGSTTSS 18 (190)
T ss_dssp CEEEEECCTTSCHHHHH
T ss_pred CEEEEECCCCCCHHHHH
Confidence 44688899999999643
No 180
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=52.95 E-value=3.5 Score=33.85 Aligned_cols=18 Identities=28% Similarity=0.314 Sum_probs=14.4
Q ss_pred CEEEEcCCCChHHHHHHH
Q 009843 55 DCFCLMPTGGGKSMCYQI 72 (524)
Q Consensus 55 d~lv~apTGsGKTl~~~l 72 (524)
.+++.+|+|||||.....
T Consensus 2 ~I~i~G~pGsGKsT~a~~ 19 (181)
T d2cdna1 2 RVLLLGPPGAGKGTQAVK 19 (181)
T ss_dssp EEEEECCTTSSHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHH
Confidence 478899999999975543
No 181
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=52.50 E-value=8.9 Score=30.63 Aligned_cols=12 Identities=17% Similarity=0.069 Sum_probs=10.5
Q ss_pred EEEcCCCChHHH
Q 009843 57 FCLMPTGGGKSM 68 (524)
Q Consensus 57 lv~apTGsGKTl 68 (524)
-+.++.|||||.
T Consensus 5 ~I~G~~gSGKTT 16 (165)
T d1xjca_ 5 QVVGYKHSGKTT 16 (165)
T ss_dssp EEECCTTSSHHH
T ss_pred EEEeCCCCCHHH
Confidence 488999999994
No 182
>d1s2ma1 c.37.1.19 (A:46-251) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=52.40 E-value=14 Score=30.81 Aligned_cols=72 Identities=19% Similarity=0.195 Sum_probs=50.6
Q ss_pred CCccEEEEeCccccHHHHHHHHHh----CCCceEEEcCCCCHHHHHHHHHHHhcCCCcEEEEccc-----c-cccccCCC
Q 009843 257 GDTCAIVYCLERTTCDELSAYLSA----GGISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVA-----F-GMGIDRKD 326 (524)
Q Consensus 257 ~~~~~IIf~~s~~~~e~l~~~L~~----~g~~~~~~h~~l~~~~R~~~~~~f~~g~~~VlVaT~a-----~-~~GiD~p~ 326 (524)
.+...++.+.+...+......+.. .++.+...+|+........ ......+|||+|+. + ...+++.+
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~----~l~~~~~Ili~TP~~l~~~l~~~~~~l~~ 143 (206)
T d1s2ma1 68 NKIQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDIL----RLNETVHILVGTPGRVLDLASRKVADLSD 143 (206)
T ss_dssp CSCCEEEECSSHHHHHHHHHHHHHHTTTTTCCEEEECSSSCHHHHHH----HTTSCCSEEEECHHHHHHHHHTTCSCCTT
T ss_pred ccccceeeccchhhhhhhhhhhhhcccccCeeEEeecCccchhhHHH----HhcccceEEEECCcccccccccceeeccc
Confidence 445678888888888777666654 3788999999988765443 33567899999963 1 22456677
Q ss_pred ccEEEE
Q 009843 327 VRLVCH 332 (524)
Q Consensus 327 v~~VI~ 332 (524)
++++|.
T Consensus 144 l~~lV~ 149 (206)
T d1s2ma1 144 CSLFIM 149 (206)
T ss_dssp CCEEEE
T ss_pred ceEEEe
Confidence 777763
No 183
>d1jr6a_ c.37.1.14 (A:) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=52.31 E-value=7.3 Score=30.64 Aligned_cols=54 Identities=15% Similarity=0.075 Sum_probs=41.9
Q ss_pred cCCCeEEEeCcHHHHHHHHHHHHHHcCCceeEeccCCCHHHHHHHHHHhhcCCCcccEEEeCc
Q 009843 76 AKPGIVLVVSPLIALMENQVIGLKEKGIAGEFLSSTQTMQVKTKIYEDLDSGKPSLRLLYVTP 138 (524)
Q Consensus 76 ~~~~~~lvl~P~~~L~~q~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ll~~tp 138 (524)
.+.+++||.++++.-++...+.|+..|+.+..+++...... ...+ ..+++++|.
T Consensus 33 ~~~~k~IVFc~t~~~ae~la~~L~~~G~~~~~~H~~~~~~~-------~~~~--~~~vlvaTd 86 (138)
T d1jr6a_ 33 IKGGRHLIFCHSKKKCDELAAKLVALGINAVAYYRGLDVSV-------IPTN--GDVVVVATD 86 (138)
T ss_dssp HTTSCEEEECSCHHHHHHHHHHHHHHTCEEEEECTTCCSCC-------CTTS--SCEEEEESS
T ss_pred cCCCCEEEEeCcHHHHHHHHHHHhccccchhhhhccchhhh-------hhhh--hcceeehhH
Confidence 35789999999999999999999999999999998776332 2223 366666664
No 184
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=51.95 E-value=4 Score=33.48 Aligned_cols=18 Identities=22% Similarity=0.252 Sum_probs=14.4
Q ss_pred CEEEEcCCCChHHHHHHH
Q 009843 55 DCFCLMPTGGGKSMCYQI 72 (524)
Q Consensus 55 d~lv~apTGsGKTl~~~l 72 (524)
.+++.+|.|||||.....
T Consensus 4 rIvl~G~pGSGKtT~a~~ 21 (180)
T d1akya1 4 RMVLIGPPGAGKGTQAPN 21 (180)
T ss_dssp EEEEECCTTSSHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHH
Confidence 478889999999975543
No 185
>d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=51.31 E-value=4.3 Score=37.26 Aligned_cols=19 Identities=37% Similarity=0.660 Sum_probs=15.4
Q ss_pred cCCC--EEEEcCCCChHHHHH
Q 009843 52 SGRD--CFCLMPTGGGKSMCY 70 (524)
Q Consensus 52 ~g~d--~lv~apTGsGKTl~~ 70 (524)
+|.+ +++.++||+|||.+.
T Consensus 82 ~G~n~~i~aYGqTGSGKTyTm 102 (330)
T d1ry6a_ 82 NGCVCSCFAYGQTGSGKTYTM 102 (330)
T ss_dssp HCCEEEEEEECCTTSSHHHHH
T ss_pred cCCCeEEEeeeccccccceee
Confidence 5876 577789999999874
No 186
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=51.26 E-value=4.2 Score=33.89 Aligned_cols=19 Identities=16% Similarity=0.121 Sum_probs=15.2
Q ss_pred CCEEEEcCCCChHHHHHHH
Q 009843 54 RDCFCLMPTGGGKSMCYQI 72 (524)
Q Consensus 54 ~d~lv~apTGsGKTl~~~l 72 (524)
-.+++.+|+|||||.....
T Consensus 7 mrIiliG~PGSGKtT~a~~ 25 (189)
T d2ak3a1 7 LRAAIMGAPGSGKGTVSSR 25 (189)
T ss_dssp CEEEEECCTTSSHHHHHHH
T ss_pred eeEEEECCCCCCHHHHHHH
Confidence 3678899999999976544
No 187
>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]}
Probab=51.21 E-value=28 Score=31.78 Aligned_cols=147 Identities=13% Similarity=0.144 Sum_probs=71.3
Q ss_pred CCCCChhHHHHHHHHHH-----cCCCCCC--HHHHHHHHHHH-c--C-----CCEEEEcCCCChHHHHHHHHHhcC-CCe
Q 009843 17 NKPLHEKEALVKLLRWH-----FGHAQFR--DKQLDAIQAVL-S--G-----RDCFCLMPTGGGKSMCYQIPALAK-PGI 80 (524)
Q Consensus 17 ~~~~~~~~~~~~~l~~~-----fg~~~~r--~~Q~~~i~~~l-~--g-----~d~lv~apTGsGKTl~~~lp~l~~-~~~ 80 (524)
..+++.++.+.+++++. +||.... +-=++++...+ . + .++++. +|+.-.+..++-++.. +..
T Consensus 40 ~p~~~~p~~i~~a~~~~~~~~~~~Y~~~~G~~~lR~~ia~~~~~~~~~~~~~~~i~it--~G~~~al~~~~~~l~~~gd~ 117 (382)
T d1b5pa_ 40 EPDFDTPEHVKEAARRALAQGKTKYAPPAGIPELREALAEKFRRENGLSVTPEETIVT--VGGSQALFNLFQAILDPGDE 117 (382)
T ss_dssp SCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHTTCCCCCGGGEEEE--SHHHHHHHHHHHHHCCTTCE
T ss_pred CCCCCCCHHHHHHHHHHHhcCCcCCCCCCCCHHHHHHHHhhhhhhcccccccccceec--CCHHHHHHHHHHHhCCCCCE
Confidence 34456667776666654 3454433 33345554433 1 1 345542 2444444444555555 456
Q ss_pred EEEeCcHHHHHHHHHHHHHHcCCceeEeccCC--C-HHHHHHHHHHhhcCCCccc-EEEeCcc----cccChhhHHHHHh
Q 009843 81 VLVVSPLIALMENQVIGLKEKGIAGEFLSSTQ--T-MQVKTKIYEDLDSGKPSLR-LLYVTPE----LTATPGFMSKLKK 152 (524)
Q Consensus 81 ~lvl~P~~~L~~q~~~~l~~~gi~~~~~~~~~--~-~~~~~~~~~~l~~~~~~~~-ll~~tpe----~v~t~~~~~~l~~ 152 (524)
+++-.|+-.-.... ++..|.......... . ..........+ .+..+ +++++|. .+.+...+..+.+
T Consensus 118 vl~~~P~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~---~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~ 191 (382)
T d1b5pa_ 118 VIVLSPYWVSYPEM---VRFAGGVVVEVETLPEEGFVPDPERVRRAI---TPRTKALVVNSPNNPTGAVYPKEVLEALAR 191 (382)
T ss_dssp EEEEESCCTHHHHH---HHHTTCEEEEEECCGGGTTCCCHHHHHTTC---CTTEEEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred EEECCCCcHHHHHH---HHHhcCeEEEEecccccccCCCHHHHHHhC---CCCCeEEEECCCCCCcchhCCHHHHHHHHH
Confidence 77778876554433 344554433332111 0 00111122212 12244 4566775 4555555666655
Q ss_pred hhccCCccEEEEeccccccc
Q 009843 153 IHSRGLLNLVAIDEAHCISS 172 (524)
Q Consensus 153 ~~~~~~l~~iViDEaH~i~~ 172 (524)
......+ +||.||+|.-..
T Consensus 192 ~~~~~~~-~ii~De~y~~~~ 210 (382)
T d1b5pa_ 192 LAVEHDF-YLVSDEIYEHLL 210 (382)
T ss_dssp HHHHTTC-EEEEECTTTTCB
T ss_pred HHHHcCe-EEEEEcccccee
Confidence 4433322 688899998654
No 188
>d1w36b1 c.37.1.19 (B:1-485) Exodeoxyribonuclease V beta chain (RecB), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=50.09 E-value=11 Score=35.60 Aligned_cols=45 Identities=18% Similarity=0.102 Sum_probs=29.9
Q ss_pred CCEEEEcCCCChHHHHHH---HHHhcC------------CCeEEEeCcHHHHHHHHHHHH
Q 009843 54 RDCFCLMPTGGGKSMCYQ---IPALAK------------PGIVLVVSPLIALMENQVIGL 98 (524)
Q Consensus 54 ~d~lv~apTGsGKTl~~~---lp~l~~------------~~~~lvl~P~~~L~~q~~~~l 98 (524)
..++|.|.-|||||.+.. +-.+.. ...+|+|+=|+.-+....+++
T Consensus 17 g~~lv~A~AGsGKT~~l~~r~~~ll~~~~~~~~~~~~~~~~~IL~lTFT~kAA~Emk~RI 76 (485)
T d1w36b1 17 GERLIEASAGTGKTFTIAALYLRLLLGLGGSAAFPRPLTVEELLVVTFTEAATAELRGRI 76 (485)
T ss_dssp SCEEEECCTTSCHHHHHHHHHHHHHTTCSSSSSCSSCCCGGGEEEEESCHHHHHHHHHHH
T ss_pred CCeEEEEcCchHHHHHHHHHHHHHHhhCcccccccCCCCcccEeEeccHHHHHHHHHHHH
Confidence 358999999999996532 122221 134889998887666655554
No 189
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=49.95 E-value=5.9 Score=32.90 Aligned_cols=16 Identities=31% Similarity=0.384 Sum_probs=13.4
Q ss_pred CEEEEcCCCChHHHHH
Q 009843 55 DCFCLMPTGGGKSMCY 70 (524)
Q Consensus 55 d~lv~apTGsGKTl~~ 70 (524)
-+++.+|+|+|||...
T Consensus 2 pIvl~GPsGsGK~tl~ 17 (190)
T d1lvga_ 2 PVVLSGPSGAGKSTLL 17 (190)
T ss_dssp CEEEECCTTSSHHHHH
T ss_pred eEEEECCCCCCHHHHH
Confidence 4789999999999654
No 190
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=49.71 E-value=5.4 Score=35.80 Aligned_cols=15 Identities=47% Similarity=0.572 Sum_probs=11.4
Q ss_pred EEcCCCChHH-HHHHH
Q 009843 58 CLMPTGGGKS-MCYQI 72 (524)
Q Consensus 58 v~apTGsGKT-l~~~l 72 (524)
+.|++||||| ++..+
T Consensus 32 i~G~qGSGKSTl~~~l 47 (286)
T d1odfa_ 32 FSGPQGSGKSFTSIQI 47 (286)
T ss_dssp EECCTTSSHHHHHHHH
T ss_pred eECCCCCCHHHHHHHH
Confidence 5799999999 45444
No 191
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=48.68 E-value=3.6 Score=33.90 Aligned_cols=14 Identities=14% Similarity=-0.176 Sum_probs=11.3
Q ss_pred EEEEcCCCChHHHH
Q 009843 56 CFCLMPTGGGKSMC 69 (524)
Q Consensus 56 ~lv~apTGsGKTl~ 69 (524)
+.+.||+|||||..
T Consensus 25 IgI~G~~GSGKSTl 38 (198)
T d1rz3a_ 25 LGIDGLSRSGKTTL 38 (198)
T ss_dssp EEEEECTTSSHHHH
T ss_pred EEEECCCCCCHHHH
Confidence 34789999999954
No 192
>d1yt8a2 c.46.1.2 (A:6-106) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=48.45 E-value=9.4 Score=27.72 Aligned_cols=39 Identities=26% Similarity=0.172 Sum_probs=32.7
Q ss_pred cCCccEEEEeCccccHHHHHHHHHhCCCc-eEEEcCCCCH
Q 009843 256 NGDTCAIVYCLERTTCDELSAYLSAGGIS-CAAYHAGLND 294 (524)
Q Consensus 256 ~~~~~~IIf~~s~~~~e~l~~~L~~~g~~-~~~~h~~l~~ 294 (524)
....++++||.+-..+...+..|.+.|+. +..+.||+..
T Consensus 56 ~~~~~vv~~~~~g~~s~~~~~~l~~~G~~nV~~l~GG~~~ 95 (101)
T d1yt8a2 56 RRDTPITVYDDGEGLAPVAAQRLHDLGYSDVALLDGGLSG 95 (101)
T ss_dssp CTTSCEEEECSSSSHHHHHHHHHHHTTCSSEEEETTHHHH
T ss_pred ccCceeeeccchhhhHHHHHHHHHHcCCCcEEEeCChHHH
Confidence 34568899999999999999999999985 7788898643
No 193
>d1e0ca2 c.46.1.2 (A:136-271) Sulfurtransferase {Azotobacter vinelandii [TaxId: 354]}
Probab=47.48 E-value=5.9 Score=31.08 Aligned_cols=38 Identities=13% Similarity=0.119 Sum_probs=31.2
Q ss_pred cCCccEEEEeCccccHHHHHHHHHhCCC-ceEEEcCCCC
Q 009843 256 NGDTCAIVYCLERTTCDELSAYLSAGGI-SCAAYHAGLN 293 (524)
Q Consensus 256 ~~~~~~IIf~~s~~~~e~l~~~L~~~g~-~~~~~h~~l~ 293 (524)
.++.++|+||.+=..+...+..|+..|+ ++..|.|++.
T Consensus 86 ~~~~~vV~yC~~G~~a~~~~~~l~~~G~~~v~~ydGg~~ 124 (136)
T d1e0ca2 86 TPDKEIVTHCQTHHRSGLTYLIAKALGYPRVKGYAGSWG 124 (136)
T ss_dssp CTTSEEEEECSSSSHHHHHHHHHHHTTCSCEEECSSHHH
T ss_pred CCCCceEEeCCChHHHHHHHHHHHHcCCCCcEEecCCHH
Confidence 3567899999988778888889999999 5888888753
No 194
>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}
Probab=47.21 E-value=77 Score=26.56 Aligned_cols=66 Identities=14% Similarity=0.071 Sum_probs=43.8
Q ss_pred CCHHHHHHHHHHHc--CCCEEEEcCCCChHHHHHHHHHhcCCCeEEEeCcHHHHHHHHHHHHHHcCCc
Q 009843 39 FRDKQLDAIQAVLS--GRDCFCLMPTGGGKSMCYQIPALAKPGIVLVVSPLIALMENQVIGLKEKGIA 104 (524)
Q Consensus 39 ~r~~Q~~~i~~~l~--g~d~lv~apTGsGKTl~~~lp~l~~~~~~lvl~P~~~L~~q~~~~l~~~gi~ 104 (524)
-.|.|-+.+..+.+ +-..++...|++|-|..++.-++..+++++-+-.--..+.-..+.+.+.|..
T Consensus 43 ~~~~~g~~L~~L~~~~~~k~iLEiGT~~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~ 110 (227)
T d1susa1 43 TSADEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVD 110 (227)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCG
T ss_pred cCHHHHHHHHHHHHhcCCCcEEEecchhhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccc
Confidence 45777777766543 3346788899999999888878877777666654444444444556665543
No 195
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=46.90 E-value=5.2 Score=34.52 Aligned_cols=31 Identities=19% Similarity=0.192 Sum_probs=25.6
Q ss_pred CCCHHHHHHHHHHHcCCCEEEEcCCCChHHH
Q 009843 38 QFRDKQLDAIQAVLSGRDCFCLMPTGGGKSM 68 (524)
Q Consensus 38 ~~r~~Q~~~i~~~l~g~d~lv~apTGsGKTl 68 (524)
.......+.+...+.|+-.++.+++|.|||-
T Consensus 80 a~~~~g~~~L~~~l~~kt~~~~G~SGVGKST 110 (225)
T d1u0la2 80 AKTGMGIEELKEYLKGKISTMAGLSGVGKSS 110 (225)
T ss_dssp TTTCTTHHHHHHHHSSSEEEEECSTTSSHHH
T ss_pred cccchhHhhHHHHhcCCeEEEECCCCCCHHH
Confidence 3445667788888899999999999999994
No 196
>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
Probab=46.59 E-value=24 Score=30.69 Aligned_cols=59 Identities=15% Similarity=0.055 Sum_probs=45.1
Q ss_pred CCccEEEEeCccccHHHHHHHHHhCCCceEEEcCCCCHHHH-HHHHHHHh--cCCCcEEEEc
Q 009843 257 GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR-SSVLDDWI--SSRKQVVVAT 315 (524)
Q Consensus 257 ~~~~~IIf~~s~~~~e~l~~~L~~~g~~~~~~h~~l~~~~R-~~~~~~f~--~g~~~VlVaT 315 (524)
.+..+++.+.+.+..+++++.|++.|..+..+..+++..+- +...+.+. .|.++|||.-
T Consensus 27 ~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iDiLVnN 88 (275)
T d1wmaa1 27 FSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNN 88 (275)
T ss_dssp SSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEEC
T ss_pred CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCcEEEEEc
Confidence 45578999999999999999999998889999999875432 23333333 3789999975
No 197
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=46.57 E-value=4.4 Score=33.46 Aligned_cols=17 Identities=18% Similarity=0.163 Sum_probs=13.9
Q ss_pred CCEEEEcCCCChHHHHH
Q 009843 54 RDCFCLMPTGGGKSMCY 70 (524)
Q Consensus 54 ~d~lv~apTGsGKTl~~ 70 (524)
+-+++++|+|+|||...
T Consensus 4 k~ivl~Gpsg~GK~tl~ 20 (178)
T d1kgda_ 4 KTLVLLGAHGVGRRHIK 20 (178)
T ss_dssp CEEEEECCTTSSHHHHH
T ss_pred CcEEEECCCCCCHHHHH
Confidence 45788999999999654
No 198
>d2g9na1 c.37.1.19 (A:21-238) Initiation factor 4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=46.09 E-value=4.1 Score=34.95 Aligned_cols=57 Identities=25% Similarity=0.295 Sum_probs=36.5
Q ss_pred CCccEEEEeCccccHHHHHHHHHhC----CCceEEEcCCCCHHHHHHHHHHHhcCCCcEEEEcc
Q 009843 257 GDTCAIVYCLERTTCDELSAYLSAG----GISCAAYHAGLNDKARSSVLDDWISSRKQVVVATV 316 (524)
Q Consensus 257 ~~~~~IIf~~s~~~~e~l~~~L~~~----g~~~~~~h~~l~~~~R~~~~~~f~~g~~~VlVaT~ 316 (524)
....+||.++|++-|.++++.+... +..+...+++....+ .......+..+|||+|+
T Consensus 79 ~~~~alil~Pt~eL~~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~IvV~TP 139 (218)
T d2g9na1 79 KATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRA---EVQKLQMEAPHIIVGTP 139 (218)
T ss_dssp CSCCEEEECSSHHHHHHHHHHHHHHHTTTTCCEEEECC--CCCS---TTTSSSSCCCSEEEECH
T ss_pred cCccEEEEcccchhhhhHHHHHhhhccccceeEEeeecccchhH---HHHHHhcCCCEEEEeCC
Confidence 4557999999999999888877643 555666666543221 11223345678999996
No 199
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
Probab=46.01 E-value=8.5 Score=32.66 Aligned_cols=29 Identities=21% Similarity=0.053 Sum_probs=17.7
Q ss_pred EEEEcCCCChHHHHH--HHHHhcCCCeEEEe
Q 009843 56 CFCLMPTGGGKSMCY--QIPALAKPGIVLVV 84 (524)
Q Consensus 56 ~lv~apTGsGKTl~~--~lp~l~~~~~~lvl 84 (524)
+++.+|.|+|||.-. ++..+..++.+.+|
T Consensus 3 i~v~G~~GsGKTTLl~~ll~~~~~~~~~~iv 33 (244)
T d1yrba1 3 VVFVGTAGSGKTTLTGEFGRYLEDNYKVAYV 33 (244)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHTTTSCEEEE
T ss_pred EEEEcCCCCcHHHHHHHHHHHHhhCCeEEEE
Confidence 578899999999432 22223344455554
No 200
>d1oywa2 c.37.1.19 (A:1-206) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=45.79 E-value=27 Score=28.63 Aligned_cols=59 Identities=10% Similarity=0.137 Sum_probs=52.6
Q ss_pred CccEEEEeCccccHHHHHHHHHhCCCceEEEcCCCCHHHHHHHHHHHhcCCCcEEEEcc
Q 009843 258 DTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQVVVATV 316 (524)
Q Consensus 258 ~~~~IIf~~s~~~~e~l~~~L~~~g~~~~~~h~~l~~~~R~~~~~~f~~g~~~VlVaT~ 316 (524)
..++++.++++.-+.+..+.|+..+.......+................+...+++.|.
T Consensus 65 ~~~~~~v~P~~~L~~q~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~t~ 123 (206)
T d1oywa2 65 NGLTVVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQIRLLYIAP 123 (206)
T ss_dssp SSEEEEECSCHHHHHHHHHHHHHTTCCEEEECTTSCHHHHHHHHHHHHHTCCSEEEECH
T ss_pred cCceEEeccchhhhhhHHHHHHhhcccccccccccccccchhHHHHHhcCCceEEEEec
Confidence 45789999999999999999999999888888888888888888888889999999885
No 201
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}
Probab=44.80 E-value=5.4 Score=34.84 Aligned_cols=19 Identities=26% Similarity=0.191 Sum_probs=15.8
Q ss_pred cCCCEEEEcCCCChHHHHH
Q 009843 52 SGRDCFCLMPTGGGKSMCY 70 (524)
Q Consensus 52 ~g~d~lv~apTGsGKTl~~ 70 (524)
.|.-+.+++|+|+|||...
T Consensus 28 ~Ge~vaIvG~sGsGKSTLl 46 (241)
T d2pmka1 28 QGEVIGIVGRSGSGKSTLT 46 (241)
T ss_dssp TTCEEEEECSTTSSHHHHH
T ss_pred CCCEEEEECCCCCCHHHHH
Confidence 4677899999999999643
No 202
>d1yksa2 c.37.1.14 (A:325-623) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=44.13 E-value=14 Score=33.21 Aligned_cols=58 Identities=12% Similarity=0.045 Sum_probs=42.2
Q ss_pred cCCCeEEEeCcHHHHHHHHHHHHHHcCCceeEeccCCCHHHHHHHHHHhhcCCCcccEEEeCcc
Q 009843 76 AKPGIVLVVSPLIALMENQVIGLKEKGIAGEFLSSTQTMQVKTKIYEDLDSGKPSLRLLYVTPE 139 (524)
Q Consensus 76 ~~~~~~lvl~P~~~L~~q~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ll~~tpe 139 (524)
...|.++|++|++.-+++....|++.|.++..+++.....+... ...+ ..+++++|..
T Consensus 34 ~~~g~~~~F~~s~~~~~~~a~~L~~~g~~V~~l~~~~~~~e~~~----~~~~--~~~~~~~t~~ 91 (299)
T d1yksa2 34 ADKRPTAWFLPSIRAANVMAASLRKAGKSVVVLNRKTFEREYPT----IKQK--KPDFILATDI 91 (299)
T ss_dssp HCCSCEEEECSCHHHHHHHHHHHHHTTCCEEECCSSSCC------------C--CCSEEEESSS
T ss_pred hcCCCEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCcCcHhHHhh----hhcC--CcCEEEEech
Confidence 35889999999999999999999999999999998877665443 2333 3677777764
No 203
>d1rhsa2 c.46.1.2 (A:150-293) Rhodanese {Cow (Bos taurus) [TaxId: 9913]}
Probab=43.76 E-value=8.8 Score=30.35 Aligned_cols=39 Identities=15% Similarity=0.124 Sum_probs=31.6
Q ss_pred cCCccEEEEeCccccHHHHHHHHHhCCC-ceEEEcCCCCH
Q 009843 256 NGDTCAIVYCLERTTCDELSAYLSAGGI-SCAAYHAGLND 294 (524)
Q Consensus 256 ~~~~~~IIf~~s~~~~e~l~~~L~~~g~-~~~~~h~~l~~ 294 (524)
.++.++|+||.+=-.+-.++-.|...|+ .+..|.|++.+
T Consensus 89 ~~~~~iI~yC~sG~~A~~~~~~l~~lG~~~v~~YdGsw~e 128 (144)
T d1rhsa2 89 DLTKPLIATCRKGVTACHIALAAYLCGKPDVAIYDGSWFE 128 (144)
T ss_dssp CTTSCEEEECSSSSTHHHHHHHHHHTTCCCCEEESSHHHH
T ss_pred CCCCCEEEEecccchHHHHHHHHHHcCCCCCEEeCCCHHH
Confidence 3567899999987778788888888898 58899998654
No 204
>d1ny5a1 c.23.1.1 (A:1-137) Transcriptional activator sigm54 (NtrC1), N-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=43.50 E-value=24 Score=27.05 Aligned_cols=46 Identities=15% Similarity=0.252 Sum_probs=32.2
Q ss_pred CCccEEEEeccccccccCCCCHHHHHHHHHHHHhCCCCCEEEEeccCChhHHH
Q 009843 157 GLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQK 209 (524)
Q Consensus 157 ~~l~~iViDEaH~i~~~g~~fr~~~~~l~~l~~~~~~~~ii~lSAT~~~~~~~ 209 (524)
..++++++|- .+.+.+ -+.-+..++...|+.|+|++||........
T Consensus 43 ~~~dlvilD~--~mp~~~-----G~e~~~~lr~~~~~~piI~lT~~~~~~~~~ 88 (137)
T d1ny5a1 43 KHFNVVLLDL--LLPDVN-----GLEILKWIKERSPETEVIVITGHGTIKTAV 88 (137)
T ss_dssp SCCSEEEEES--BCSSSB-----HHHHHHHHHHHCTTSEEEEEEETTCHHHHH
T ss_pred cccccchHHH--hhhhhh-----HHHHHHHHHHhCCCCCEEEEECCCCHHHHH
Confidence 3589999993 233321 145677788888999999999987665433
No 205
>d1a1va2 c.37.1.14 (A:326-624) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=42.87 E-value=7.3 Score=34.98 Aligned_cols=38 Identities=16% Similarity=0.057 Sum_probs=34.4
Q ss_pred CCCeEEEeCcHHHHHHHHHHHHHHcCCceeEeccCCCH
Q 009843 77 KPGIVLVVSPLIALMENQVIGLKEKGIAGEFLSSTQTM 114 (524)
Q Consensus 77 ~~~~~lvl~P~~~L~~q~~~~l~~~gi~~~~~~~~~~~ 114 (524)
+++++||.++++.-+++....|++.|+.+..+++....
T Consensus 35 kggk~LVFcnSR~~aE~La~~L~~~Gi~a~~~Hgglsq 72 (299)
T d1a1va2 35 KGGRHLIFCHSKKKCDELAAKLVALGINAVAYYRGLDV 72 (299)
T ss_dssp HSSEEEEECSSHHHHHHHHHHHHHTTCCEEEECTTSCG
T ss_pred cCCCEEEECCcHHHHHHHHHHHHHCCCCEEEEeCCchH
Confidence 57899999999999999999999999999999887654
No 206
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=42.78 E-value=6 Score=34.74 Aligned_cols=19 Identities=32% Similarity=0.401 Sum_probs=16.0
Q ss_pred cCCCEEEEcCCCChHHHHH
Q 009843 52 SGRDCFCLMPTGGGKSMCY 70 (524)
Q Consensus 52 ~g~d~lv~apTGsGKTl~~ 70 (524)
.|.-+.+++|+|+|||...
T Consensus 39 ~Ge~vaivG~sGsGKSTLl 57 (251)
T d1jj7a_ 39 PGEVTALVGPNGSGKSTVA 57 (251)
T ss_dssp TTCEEEEECSTTSSHHHHH
T ss_pred CCCEEEEECCCCCcHHHHH
Confidence 4778899999999999644
No 207
>d2b2na1 c.37.1.19 (A:26-333) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=42.43 E-value=37 Score=30.23 Aligned_cols=92 Identities=13% Similarity=-0.009 Sum_probs=60.5
Q ss_pred cCCccEEEEeCccccHHHHHHHHHhC-CCceEEEcC-------CC-----CHHHHHHHHHHHhcCCCcEEEEcccccccc
Q 009843 256 NGDTCAIVYCLERTTCDELSAYLSAG-GISCAAYHA-------GL-----NDKARSSVLDDWISSRKQVVVATVAFGMGI 322 (524)
Q Consensus 256 ~~~~~~IIf~~s~~~~e~l~~~L~~~-g~~~~~~h~-------~l-----~~~~R~~~~~~f~~g~~~VlVaT~a~~~Gi 322 (524)
...+++||.|++...++++++.|+.. +-.+..+=+ .. ...+|..++..+.+++..|+|+|...-++-
T Consensus 12 ~~~~p~lvv~~~~~~A~~l~~~L~~~~~~~v~~fP~~e~lpyd~~s~~~~i~~~R~~~L~~l~~~~~~iiits~~al~~~ 91 (308)
T d2b2na1 12 RHAGPVVLIAPDMQNALRLHDEISQFTDQMVMNLADWETLPYDSFSPHQDIISSRLSTLYQLPTMQRGVLIVPVNTLMQR 91 (308)
T ss_dssp HCSSCEEEEESSHHHHHHHHHHHHTTCSSCEEECCCCCSCTTCSSCCCHHHHHHHHHHHHHGGGCCSSEEEEEHHHHTBC
T ss_pred hhCCCEEEEcCCHHHHHHHHHHHHhcCCCceEEcCCcccCccccCCCChHHHHHHHHHHHHHhhcCCceEEeechhhhhh
Confidence 34568999999999999999999864 333333211 11 124688888888898888999885444332
Q ss_pred cCC-----CccEEEEeCCCCCHHHHHHHHh
Q 009843 323 DRK-----DVRLVCHFNIPKSMEAFYQESG 347 (524)
Q Consensus 323 D~p-----~v~~VI~~~~p~s~~~y~Q~~G 347 (524)
=.| .-...+..+-.-+.+.+....=
T Consensus 92 ~~p~~~~~~~~~~l~~g~~~~~~~l~~~L~ 121 (308)
T d2b2na1 92 VCPHSFLHGHALVMKKGQRLSRDALRTQLD 121 (308)
T ss_dssp CCCHHHHHHHCEEEETTCBCCHHHHHHHHH
T ss_pred cccHHHHHHHHHhhhhhccccHHHHHHHHH
Confidence 122 1235677777777777655443
No 208
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
Probab=42.41 E-value=5 Score=36.67 Aligned_cols=15 Identities=13% Similarity=0.038 Sum_probs=12.2
Q ss_pred EEEEcCCCChHHHHH
Q 009843 56 CFCLMPTGGGKSMCY 70 (524)
Q Consensus 56 ~lv~apTGsGKTl~~ 70 (524)
+++.+|+|+|||+..
T Consensus 126 ~l~~G~pG~GKT~la 140 (321)
T d1w44a_ 126 VIVTGKGNSGKTPLV 140 (321)
T ss_dssp EEEECSSSSCHHHHH
T ss_pred EEEECCCCccHHHHH
Confidence 455799999999764
No 209
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]}
Probab=42.38 E-value=6.5 Score=33.14 Aligned_cols=20 Identities=25% Similarity=0.263 Sum_probs=16.4
Q ss_pred cCCCEEEEcCCCChHHHHHH
Q 009843 52 SGRDCFCLMPTGGGKSMCYQ 71 (524)
Q Consensus 52 ~g~d~lv~apTGsGKTl~~~ 71 (524)
.|+-+.+.+|.|+|||..+-
T Consensus 26 ~Gei~~l~G~NGsGKSTLl~ 45 (200)
T d1sgwa_ 26 KGNVVNFHGPNGIGKTTLLK 45 (200)
T ss_dssp TTCCEEEECCTTSSHHHHHH
T ss_pred CCCEEEEECCCCChHHHHHH
Confidence 46778899999999997543
No 210
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.89 E-value=5.8 Score=33.35 Aligned_cols=14 Identities=29% Similarity=0.029 Sum_probs=11.3
Q ss_pred EEEcCCCChHHHHH
Q 009843 57 FCLMPTGGGKSMCY 70 (524)
Q Consensus 57 lv~apTGsGKTl~~ 70 (524)
-+.||+|||||...
T Consensus 6 gI~G~~gSGKSTla 19 (213)
T d1uj2a_ 6 GVSGGTASGKSSVC 19 (213)
T ss_dssp EEECSTTSSHHHHH
T ss_pred EEECCCCCCHHHHH
Confidence 46799999999654
No 211
>d1z3ix1 c.37.1.19 (X:390-735) Rad54-like, Rad54L {Zebra fish (Danio rerio) [TaxId: 7955]}
Probab=40.79 E-value=65 Score=29.00 Aligned_cols=79 Identities=14% Similarity=0.161 Sum_probs=57.1
Q ss_pred CCCChHHHHH--HHHHh--cCCCeEEEeCcHHHHHHHHHHHHHHcCCceeEeccCCCHHHHHHHHHHhhcCCCcccEEEe
Q 009843 61 PTGGGKSMCY--QIPAL--AKPGIVLVVSPLIALMENQVIGLKEKGIAGEFLSSTQTMQVKTKIYEDLDSGKPSLRLLYV 136 (524)
Q Consensus 61 pTGsGKTl~~--~lp~l--~~~~~~lvl~P~~~L~~q~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ll~~ 136 (524)
+-.|||.... ++..+ ..+.++||++.....+.-..+.|...|+....+.+..+...+..+......+.....++..
T Consensus 97 ~~~S~Kl~~L~~ll~~~~~~~g~KvlIFs~~~~~ld~l~~~l~~~g~~~~~l~G~~~~~~R~~~i~~F~~~~~~~~vlLl 176 (346)
T d1z3ix1 97 PQLSGKMLVLDYILAMTRTTTSDKVVLVSNYTQTLDLFEKLCRNRRYLYVRLDGTMSIKKRAKIVERFNNPSSPEFIFML 176 (346)
T ss_dssp GGGSHHHHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHHHHHHTCCEEEECSSCCHHHHHHHHHHHHSTTCCCCEEEE
T ss_pred cccCHHHHHHHHHHHHHHHhcCCceeEEeehhhhhHHHHHHHhhhhccccccccchhHHHHHHHHHhhhcccccceeeee
Confidence 3458997432 22222 3367999999888777766677888999999999999999988888888776554556655
Q ss_pred Ccc
Q 009843 137 TPE 139 (524)
Q Consensus 137 tpe 139 (524)
++.
T Consensus 177 s~~ 179 (346)
T d1z3ix1 177 SSK 179 (346)
T ss_dssp EGG
T ss_pred cch
Confidence 554
No 212
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=40.71 E-value=7 Score=31.62 Aligned_cols=15 Identities=27% Similarity=0.144 Sum_probs=12.2
Q ss_pred EEEEcCCCChHHHHH
Q 009843 56 CFCLMPTGGGKSMCY 70 (524)
Q Consensus 56 ~lv~apTGsGKTl~~ 70 (524)
+++.|+.|+|||...
T Consensus 4 ivi~G~~GsGKTT~~ 18 (194)
T d1nksa_ 4 GIVTGIPGVGKSTVL 18 (194)
T ss_dssp EEEEECTTSCHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 467899999999654
No 213
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=40.71 E-value=5.1 Score=34.71 Aligned_cols=18 Identities=33% Similarity=0.458 Sum_probs=15.2
Q ss_pred cCCCEEEEcCCCChHHHH
Q 009843 52 SGRDCFCLMPTGGGKSMC 69 (524)
Q Consensus 52 ~g~d~lv~apTGsGKTl~ 69 (524)
+|.-+.+.+|+|+|||..
T Consensus 30 ~Ge~~~iiG~sGsGKSTL 47 (230)
T d1l2ta_ 30 EGEFVSIMGPSGSGKSTM 47 (230)
T ss_dssp TTCEEEEECSTTSSHHHH
T ss_pred CCCEEEEECCCCCCcchh
Confidence 567788999999999954
No 214
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=40.64 E-value=6 Score=32.84 Aligned_cols=15 Identities=13% Similarity=0.042 Sum_probs=12.6
Q ss_pred EEEEcCCCChHHHHH
Q 009843 56 CFCLMPTGGGKSMCY 70 (524)
Q Consensus 56 ~lv~apTGsGKTl~~ 70 (524)
++++|.+|+|||..+
T Consensus 5 i~l~GlpgsGKSTla 19 (213)
T d1bifa1 5 IVMVGLPARGKTYIS 19 (213)
T ss_dssp EEEECCTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 577899999999765
No 215
>d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga maritima [TaxId: 2336]}
Probab=40.37 E-value=41 Score=30.25 Aligned_cols=149 Identities=15% Similarity=0.108 Sum_probs=70.8
Q ss_pred CCCCChhHHHHHHHHHHc-----CCCCCC--HHHHHHHHHHHc--------CCCEEEEcCCCChHHHHH-HHHHhcC-CC
Q 009843 17 NKPLHEKEALVKLLRWHF-----GHAQFR--DKQLDAIQAVLS--------GRDCFCLMPTGGGKSMCY-QIPALAK-PG 79 (524)
Q Consensus 17 ~~~~~~~~~~~~~l~~~f-----g~~~~r--~~Q~~~i~~~l~--------g~d~lv~apTGsGKTl~~-~lp~l~~-~~ 79 (524)
..++++++.+.+.+++.. +|.... +.=++++...+. ..++++ |.+|....+ .+-++.. +.
T Consensus 37 ~p~~~~p~~i~~~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~~---t~G~~~al~~~~~~l~~~gd 113 (375)
T d1o4sa_ 37 EPDFPTPEPVVEEAVRFLQKGEVKYTDPRGIYELREGIAKRIGERYKKDISPDQVVV---TNGAKQALFNAFMALLDPGD 113 (375)
T ss_dssp SCSSCCCHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHHHHTCCCCGGGEEE---ESHHHHHHHHHHHHHCCTTC
T ss_pred CCCCCCCHHHHHHHHHHHhcCCcCCCCCcCCHHHHHHHHhhhhhccccccccccccc---cCcHHHHHHHHHHHHhCCCC
Confidence 344566677777777643 455443 444556655432 133444 333444333 3444544 45
Q ss_pred eEEEeCcHHHHHHHHHHHHHHcCCceeEeccCCCHH--HHHHHHHHhhcCCCcc-cEEEeCcc----cccChhhHHHHHh
Q 009843 80 IVLVVSPLIALMENQVIGLKEKGIAGEFLSSTQTMQ--VKTKIYEDLDSGKPSL-RLLYVTPE----LTATPGFMSKLKK 152 (524)
Q Consensus 80 ~~lvl~P~~~L~~q~~~~l~~~gi~~~~~~~~~~~~--~~~~~~~~l~~~~~~~-~ll~~tpe----~v~t~~~~~~l~~ 152 (524)
.+++..|+-....... ...+............. ........ ...... -+++++|. .+.+...+..+.+
T Consensus 114 ~vlv~~P~y~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~nP~NPTG~~~s~~~~~~i~~ 188 (375)
T d1o4sa_ 114 EVIVFSPVWVSYIPQI---ILAGGTVNVVETFMSKNFQPSLEEVEG--LLVGKTKAVLINSPNNPTGVVYRREFLEGLVR 188 (375)
T ss_dssp EEEEEESCCTTHHHHH---HHTTCEEEEEECCGGGTTCCCHHHHHH--TCCTTEEEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred EEEEccCccccchhhh---hccccccccccccccccccchhHHHHH--hhccCccEEEEeCCCCCccCCCCHHHHHHHHH
Confidence 7777788755443322 23333322221111100 00011111 111223 34566665 4445555555554
Q ss_pred hhccCCccEEEEeccccccccC
Q 009843 153 IHSRGLLNLVAIDEAHCISSWG 174 (524)
Q Consensus 153 ~~~~~~l~~iViDEaH~i~~~g 174 (524)
...... -+||.||+|....++
T Consensus 189 ~a~~~~-~~ii~De~y~~~~~~ 209 (375)
T d1o4sa_ 189 LAKKRN-FYIISDEVYDSLVYT 209 (375)
T ss_dssp HHHHHT-CEEEEECTTTTSBCS
T ss_pred hHHHcC-CceehHhhhcccccc
Confidence 433222 269999999876644
No 216
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=40.27 E-value=5.2 Score=35.27 Aligned_cols=18 Identities=33% Similarity=0.455 Sum_probs=15.5
Q ss_pred cCCCEEEEcCCCChHHHH
Q 009843 52 SGRDCFCLMPTGGGKSMC 69 (524)
Q Consensus 52 ~g~d~lv~apTGsGKTl~ 69 (524)
.|.-+.+++|+|+|||..
T Consensus 43 ~Ge~vaivG~sGsGKSTL 60 (255)
T d2hyda1 43 KGETVAFVGMSGGGKSTL 60 (255)
T ss_dssp TTCEEEEECSTTSSHHHH
T ss_pred CCCEEEEECCCCCcHHHH
Confidence 577889999999999954
No 217
>d1xhfa1 c.23.1.1 (A:2-122) Aerobic respiration control protein ArcA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=40.13 E-value=65 Score=23.73 Aligned_cols=44 Identities=23% Similarity=0.219 Sum_probs=27.5
Q ss_pred CccEEEEeccccccccCCCCHHHHHHHHHHHHhCCCCCEEEEeccCChhHHH
Q 009843 158 LLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQK 209 (524)
Q Consensus 158 ~l~~iViDEaH~i~~~g~~fr~~~~~l~~l~~~~~~~~ii~lSAT~~~~~~~ 209 (524)
.++++++| .+.-...| +..+..++. .+++|++++|+........
T Consensus 46 ~~dlii~D-~~mp~~~G------~~~~~~~r~-~~~~pii~lt~~~~~~~~~ 89 (121)
T d1xhfa1 46 DINLVIMD-INLPGKNG------LLLARELRE-QANVALMFLTGRDNEVDKI 89 (121)
T ss_dssp CCSEEEEC-SSCSSSCH------HHHHHHHHH-HCCCEEEEEESCCSHHHHH
T ss_pred CCCEEEee-cccCCccC------cHHHHHHHh-cCCCcEEEEECCCCHHHHH
Confidence 48899998 22212122 234444444 4789999999988776543
No 218
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=40.03 E-value=9.1 Score=31.55 Aligned_cols=19 Identities=32% Similarity=0.345 Sum_probs=15.7
Q ss_pred cCCCEEEEcCCCChHHHHH
Q 009843 52 SGRDCFCLMPTGGGKSMCY 70 (524)
Q Consensus 52 ~g~d~lv~apTGsGKTl~~ 70 (524)
.|+-+++.+|.|+|||...
T Consensus 14 ~g~gvli~G~sG~GKS~la 32 (177)
T d1knxa2 14 FGVGVLLTGRSGIGKSECA 32 (177)
T ss_dssp TTEEEEEEESSSSSHHHHH
T ss_pred CCEEEEEEcCCCCCHHHHH
Confidence 4667899999999999654
No 219
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=39.73 E-value=7.9 Score=32.37 Aligned_cols=17 Identities=24% Similarity=0.249 Sum_probs=12.5
Q ss_pred EEEEcCCCChHHHHHHH
Q 009843 56 CFCLMPTGGGKSMCYQI 72 (524)
Q Consensus 56 ~lv~apTGsGKTl~~~l 72 (524)
+.+.+|+|||||....+
T Consensus 6 I~I~GppGSGKgT~ak~ 22 (225)
T d1ckea_ 6 ITIDGPSGAGKGTLCKA 22 (225)
T ss_dssp EEEECCTTSSHHHHHHH
T ss_pred EEEECCCCCCHHHHHHH
Confidence 34569999999975543
No 220
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=39.16 E-value=10 Score=31.19 Aligned_cols=19 Identities=26% Similarity=0.179 Sum_probs=15.8
Q ss_pred cCCCEEEEcCCCChHHHHH
Q 009843 52 SGRDCFCLMPTGGGKSMCY 70 (524)
Q Consensus 52 ~g~d~lv~apTGsGKTl~~ 70 (524)
.|+-+++.++.|+|||-+.
T Consensus 13 ~g~gvl~~G~sG~GKStla 31 (176)
T d1kkma_ 13 YGLGVLITGDSGVGKSETA 31 (176)
T ss_dssp TTEEEEEECCTTSCHHHHH
T ss_pred CCEEEEEEeCCCCCHHHHH
Confidence 4667899999999998654
No 221
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=38.96 E-value=9.2 Score=32.91 Aligned_cols=17 Identities=24% Similarity=0.055 Sum_probs=14.3
Q ss_pred CCCEEEEcCCCChHHHH
Q 009843 53 GRDCFCLMPTGGGKSMC 69 (524)
Q Consensus 53 g~d~lv~apTGsGKTl~ 69 (524)
++.+++.||.|+|||..
T Consensus 29 ~~~i~i~G~~G~GKTsL 45 (283)
T d2fnaa2 29 APITLVLGLRRTGKSSI 45 (283)
T ss_dssp SSEEEEEESTTSSHHHH
T ss_pred CCEEEEEcCCCCcHHHH
Confidence 45688999999999954
No 222
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}
Probab=38.95 E-value=9.6 Score=31.66 Aligned_cols=31 Identities=16% Similarity=0.014 Sum_probs=19.4
Q ss_pred CCEEEEcC-CCChHHHHHH--HHHhc-CCCeEEEe
Q 009843 54 RDCFCLMP-TGGGKSMCYQ--IPALA-KPGIVLVV 84 (524)
Q Consensus 54 ~d~lv~ap-TGsGKTl~~~--lp~l~-~~~~~lvl 84 (524)
|..+|.+- ||.|||.+.. .-++. ++.+++++
T Consensus 2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~i 36 (224)
T d1byia_ 2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGY 36 (224)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEE
Confidence 34567765 7999997644 23343 35567766
No 223
>d1ys7a2 c.23.1.1 (A:7-127) Transcriptional regulatory protein PrrA, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=38.81 E-value=69 Score=23.62 Aligned_cols=42 Identities=19% Similarity=0.292 Sum_probs=28.7
Q ss_pred CccEEEEeccccccccCCCCHHHHHHHHHHHHhCCCCCEEEEeccCChh
Q 009843 158 LLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPK 206 (524)
Q Consensus 158 ~l~~iViDEaH~i~~~g~~fr~~~~~l~~l~~~~~~~~ii~lSAT~~~~ 206 (524)
..+++++|-- +-+.+ -+..+..+++..++.|++++||.....
T Consensus 45 ~~dlvl~D~~--mP~~~-----G~el~~~ir~~~~~~piI~lt~~~~~~ 86 (121)
T d1ys7a2 45 RPDAIVLDIN--MPVLD-----GVSVVTALRAMDNDVPVCVLSARSSVD 86 (121)
T ss_dssp CCSEEEEESS--CSSSC-----HHHHHHHHHHTTCCCCEEEEECCCTTT
T ss_pred CCCEEEEEee--ccCcc-----cHHHHHHHHhcCCCCEEEEEEeeCCHH
Confidence 4788888832 22211 145667777778899999999986554
No 224
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=38.76 E-value=6.5 Score=34.29 Aligned_cols=19 Identities=32% Similarity=0.450 Sum_probs=15.3
Q ss_pred cCCCEEEEcCCCChHHHHH
Q 009843 52 SGRDCFCLMPTGGGKSMCY 70 (524)
Q Consensus 52 ~g~d~lv~apTGsGKTl~~ 70 (524)
.|.-+.+++|+|+|||...
T Consensus 27 ~Ge~vaivG~sGsGKSTLl 45 (242)
T d1mv5a_ 27 PNSIIAFAGPSGGGKSTIF 45 (242)
T ss_dssp TTEEEEEECCTTSSHHHHH
T ss_pred CCCEEEEECCCCCCHHHHH
Confidence 4666889999999999643
No 225
>d1wsta1 c.67.1.1 (A:13-415) Multiple substrate aminotransferase, MSAT {Thermococcus profundus [TaxId: 49899]}
Probab=38.68 E-value=70 Score=28.88 Aligned_cols=133 Identities=11% Similarity=0.007 Sum_probs=63.6
Q ss_pred cCCCCCC--HHHHHHHHHHHc--------CCCEEEEcCCCChHHHHHHH-HHhcC-CCeEEEeCcHHHHHHHHHHHHHHc
Q 009843 34 FGHAQFR--DKQLDAIQAVLS--------GRDCFCLMPTGGGKSMCYQI-PALAK-PGIVLVVSPLIALMENQVIGLKEK 101 (524)
Q Consensus 34 fg~~~~r--~~Q~~~i~~~l~--------g~d~lv~apTGsGKTl~~~l-p~l~~-~~~~lvl~P~~~L~~q~~~~l~~~ 101 (524)
++|.... +.-++++...+. ..++++ |.++....+.+ -++.. +..+++..|+-....... ...
T Consensus 65 ~~Y~~~~G~~~lR~aia~~l~~~~g~~~~~~~I~i---t~G~~~al~~~~~~l~~~gd~v~~~~P~y~~~~~~~---~~~ 138 (403)
T d1wsta1 65 LQYGTTKGFTPLRLALARWMEKRYDIPMSKVEIMT---VAGSQQALDLIGRVFLNPGDPIVVEAPTYLAAIQAF---KYY 138 (403)
T ss_dssp HSCCCSSCCHHHHHHHHHHHHHHHCCCCTTCEEEE---ESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHH---HTT
T ss_pred cCCCCCcCCHHHHHHHHHHHHHHhCCCCChHHeee---cccchHHHHHHHHHHhhcCCccccCCCcchhhhHHH---hhc
Confidence 4565443 344566655542 234554 44555544433 34444 457788889876655544 344
Q ss_pred CCceeEecc---CCCHHHHHHHHH-HhhcCCCcccEE-EeCcc----cccChhhHHHHHhhhccCCccEEEEeccccccc
Q 009843 102 GIAGEFLSS---TQTMQVKTKIYE-DLDSGKPSLRLL-YVTPE----LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISS 172 (524)
Q Consensus 102 gi~~~~~~~---~~~~~~~~~~~~-~l~~~~~~~~ll-~~tpe----~v~t~~~~~~l~~~~~~~~l~~iViDEaH~i~~ 172 (524)
|.....+.. ............ ..........++ ..+|. .+.+...+..+.+......+ +||.||++.-..
T Consensus 139 g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~NPtG~~~s~~~l~~i~~~a~~~~~-~li~De~y~~l~ 217 (403)
T d1wsta1 139 DPEFISIPLDDKGMRVDLLEEKLEELRKQGKRVKIVYTVSTFQNPAGVTMSVDRRKKLLELANEYDF-LIVEDGPYSELR 217 (403)
T ss_dssp CCEEEEEEEETTEECHHHHHHHHHHHHHTTCCCCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTC-EEEEECTTTTCB
T ss_pred cccceeEeecccCCccccccccchhhhhccccccccccccccCCCCCccCCHHHHHHHHHHHHhcCc-eeccccchhhee
Confidence 544333222 222222222222 222222222222 23332 44555555566554433323 799999997654
Q ss_pred c
Q 009843 173 W 173 (524)
Q Consensus 173 ~ 173 (524)
+
T Consensus 218 ~ 218 (403)
T d1wsta1 218 Y 218 (403)
T ss_dssp C
T ss_pred c
Confidence 3
No 226
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]}
Probab=38.40 E-value=2.8 Score=34.16 Aligned_cols=36 Identities=22% Similarity=0.218 Sum_probs=23.7
Q ss_pred EEEEcCCCChHHHHH--HHHHhcCCCeEEEeCcHHHHHHH
Q 009843 56 CFCLMPTGGGKSMCY--QIPALAKPGIVLVVSPLIALMEN 93 (524)
Q Consensus 56 ~lv~apTGsGKTl~~--~lp~l~~~~~~lvl~P~~~L~~q 93 (524)
+++.++-|+|||.-. ++-++ +...-|-+||-.|++.
T Consensus 36 i~L~G~LGaGKTtfvr~~~~~l--g~~~~V~SPTF~l~~~ 73 (158)
T d1htwa_ 36 VYLNGDLGAGKTTLTRGMLQGI--GHQGNVKSPTYTLVEE 73 (158)
T ss_dssp EEEECSTTSSHHHHHHHHHHHT--TCCSCCCCCTTTCEEE
T ss_pred EEEecCCCccHHHHHHHHHhhc--ccccccCCCceEEEEe
Confidence 567899999999432 23333 2223478999888753
No 227
>d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]}
Probab=38.35 E-value=60 Score=29.50 Aligned_cols=110 Identities=20% Similarity=0.204 Sum_probs=57.1
Q ss_pred CHHHHHHHHHHHHhCC---CCC-EEEEeccCChhHHHHHHHHhCCCCCeEEeccCCCCcceEEEEeeCchhhHHHHHHHH
Q 009843 177 FRPSYRKLSSLRNYLP---DVP-ILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLCSV 252 (524)
Q Consensus 177 fr~~~~~l~~l~~~~~---~~~-ii~lSAT~~~~~~~~i~~~l~l~~~~~~~~~~~~~~l~~~v~~~~~~~~~~~~l~~~ 252 (524)
-||+|-.+..+...+. +.. .+..|++- -++...+...+++.....+....+...+ .......+..+.+.
T Consensus 11 tR~e~~kl~pli~~l~~~~~~~~~li~tG~H-~~~~~~~~~~~~i~~~~~~~~~~~~~~~------~~~~~~~i~~~~~~ 83 (377)
T d1o6ca_ 11 TRPEAIKMAPLVLELKKYPEIDSYVTVTAQH-RQMLDQVLDAFHIKPDFDLNIMKERQTL------AEITSNALVRLDEL 83 (377)
T ss_dssp SHHHHHHHHHHHHHGGGCTTEEEEEEECCSC-GGGTHHHHHHTTCCCSEECCCCCTTCCH------HHHHHHHHHHHHHH
T ss_pred chHhHHHHHHHHHHHHhCCCCCEEEEEeCCC-HHHHHHHHhhcCCCCceeeecCCCCCCH------HHHHHHHHHhhhhh
Confidence 6899988888777664 333 45556654 2344445566665322211111111100 01112344556666
Q ss_pred HHhcCCccEEEEeCccccHHHHHHHHHhCCCceEEEcCCCCH
Q 009843 253 LKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 294 (524)
Q Consensus 253 l~~~~~~~~IIf~~s~~~~e~l~~~L~~~g~~~~~~h~~l~~ 294 (524)
+....+.-++|+- -+.++-..+-.-...+++++.+|||+-.
T Consensus 84 ~~~~kpD~v~v~G-Dr~e~la~a~aa~~~~Ipi~HiegG~~s 124 (377)
T d1o6ca_ 84 FKDIKPDIVLVHG-DTTTTFAGSLAAFYHQIAVGHVEAGLRT 124 (377)
T ss_dssp HHHHCCSEEEEET-TCHHHHHHHHHHHHTTCEEEEESCCCCC
T ss_pred hhhcccceeEeee-cccccchhhhhhhhccceEEEEeccccc
Confidence 6666655455554 3333333333334579999999997643
No 228
>d1xx6a1 c.37.1.24 (A:2-142) Thymidine kinase, TK1, N-terminal domain {Clostridium acetobutylicum [TaxId: 1488]}
Probab=38.31 E-value=9.5 Score=30.10 Aligned_cols=32 Identities=25% Similarity=0.183 Sum_probs=21.2
Q ss_pred EEEEcCCCChHHHHHHHHHh----cCCCeEEEeCcHH
Q 009843 56 CFCLMPTGGGKSMCYQIPAL----AKPGIVLVVSPLI 88 (524)
Q Consensus 56 ~lv~apTGsGKTl~~~lp~l----~~~~~~lvl~P~~ 88 (524)
-++.+|..||||.- ++-.+ ..+..++++-|..
T Consensus 10 ~lI~GpMfSGKTte-Li~~~~~~~~~g~~vl~i~~~~ 45 (141)
T d1xx6a1 10 EVIVGPMYSGKSEE-LIRRIRRAKIAKQKIQVFKPEI 45 (141)
T ss_dssp EEEECSTTSSHHHH-HHHHHHHHHHTTCCEEEEEEC-
T ss_pred EEEEeccccHHHHH-HHHHHHHhhhcCCcEEEEEecc
Confidence 47889999999964 33222 2366777777764
No 229
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=37.96 E-value=7.4 Score=34.13 Aligned_cols=19 Identities=26% Similarity=0.363 Sum_probs=15.8
Q ss_pred cCCCEEEEcCCCChHHHHH
Q 009843 52 SGRDCFCLMPTGGGKSMCY 70 (524)
Q Consensus 52 ~g~d~lv~apTGsGKTl~~ 70 (524)
.|.-+.+++|+|+|||...
T Consensus 40 ~Ge~iaivG~sGsGKSTLl 58 (253)
T d3b60a1 40 AGKTVALVGRSGSGKSTIA 58 (253)
T ss_dssp TTCEEEEEECTTSSHHHHH
T ss_pred CCCEEEEECCCCChHHHHH
Confidence 4677899999999999543
No 230
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=37.00 E-value=9.1 Score=32.11 Aligned_cols=19 Identities=32% Similarity=0.204 Sum_probs=13.6
Q ss_pred EEEEcCCCChHHHHHHHHH
Q 009843 56 CFCLMPTGGGKSMCYQIPA 74 (524)
Q Consensus 56 ~lv~apTGsGKTl~~~lp~ 74 (524)
+.+.+|.|+|||..+.+-+
T Consensus 6 IaIdGp~GsGKgT~ak~La 24 (223)
T d1q3ta_ 6 IAIDGPASSGKSTVAKIIA 24 (223)
T ss_dssp EEEECSSCSSHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHH
Confidence 3456999999997664433
No 231
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}
Probab=36.43 E-value=11 Score=30.74 Aligned_cols=19 Identities=26% Similarity=0.162 Sum_probs=15.8
Q ss_pred cCCCEEEEcCCCChHHHHH
Q 009843 52 SGRDCFCLMPTGGGKSMCY 70 (524)
Q Consensus 52 ~g~d~lv~apTGsGKTl~~ 70 (524)
.|+-+++.++.|+|||.+.
T Consensus 14 ~g~gvli~G~sg~GKS~la 32 (169)
T d1ko7a2 14 YGVGVLITGDSGIGKSETA 32 (169)
T ss_dssp TTEEEEEEESTTSSHHHHH
T ss_pred CCEEEEEEeCCCCCHHHHH
Confidence 4677999999999999653
No 232
>d1wp9a2 c.37.1.19 (A:201-486) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=35.96 E-value=35 Score=29.67 Aligned_cols=60 Identities=15% Similarity=0.258 Sum_probs=45.3
Q ss_pred CCCeEEEeCcHHHHHHHHHHHHHHcCCceeEeccCCCH--------HHHHHHHHHhhcCCCcccEEEeCc
Q 009843 77 KPGIVLVVSPLIALMENQVIGLKEKGIAGEFLSSTQTM--------QVKTKIYEDLDSGKPSLRLLYVTP 138 (524)
Q Consensus 77 ~~~~~lvl~P~~~L~~q~~~~l~~~gi~~~~~~~~~~~--------~~~~~~~~~l~~~~~~~~ll~~tp 138 (524)
.+.++||.++++.-+....+.|.+.|+++..+.+.... .++......+..+. ++++++|.
T Consensus 160 ~~~k~iiF~~~~~~~~~~~~~L~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~F~~g~--~~vLv~T~ 227 (286)
T d1wp9a2 160 QNSKIIVFTNYRETAKKIVNELVKDGIKAKRFVGQASKENDRGLSQREQKLILDEFARGE--FNVLVATS 227 (286)
T ss_dssp TTCCEEEECSCHHHHHHHHHHHHHTTCCEEEECCSSCC-------CCHHHHHHHHHHHTS--CSEEEECG
T ss_pred CCCcEEEEeCcHHhHHHHHHHHHHcCCceEEeeccccccccchhchHHHHHHHHHHHcCC--CcEEEEcc
Confidence 36789999999999999999999999998877664332 24455666777765 67777663
No 233
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=35.52 E-value=10 Score=32.88 Aligned_cols=19 Identities=32% Similarity=0.457 Sum_probs=15.4
Q ss_pred cCCCEEEEcCCCChHHHHH
Q 009843 52 SGRDCFCLMPTGGGKSMCY 70 (524)
Q Consensus 52 ~g~d~lv~apTGsGKTl~~ 70 (524)
+|.-+.+.+|+|+|||...
T Consensus 28 ~Ge~~~liG~sGaGKSTll 46 (240)
T d1g2912 28 DGEFMILLGPSGCGKTTTL 46 (240)
T ss_dssp TTCEEEEECSTTSSHHHHH
T ss_pred CCCEEEEECCCCChHHHHH
Confidence 4667889999999999543
No 234
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=34.72 E-value=11 Score=32.48 Aligned_cols=19 Identities=32% Similarity=0.420 Sum_probs=15.2
Q ss_pred cCCCEEEEcCCCChHHHHH
Q 009843 52 SGRDCFCLMPTGGGKSMCY 70 (524)
Q Consensus 52 ~g~d~lv~apTGsGKTl~~ 70 (524)
.|.-+.+.+|.|+|||...
T Consensus 25 ~Gei~~liGpsGsGKSTLl 43 (232)
T d2awna2 25 EGEFVVFVGPSGCGKSTLL 43 (232)
T ss_dssp TTCEEEEECCTTSSHHHHH
T ss_pred CCCEEEEECCCCChHHHHH
Confidence 4667889999999999543
No 235
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=34.24 E-value=6.9 Score=34.09 Aligned_cols=18 Identities=28% Similarity=0.331 Sum_probs=15.0
Q ss_pred cCCCEEEEcCCCChHHHH
Q 009843 52 SGRDCFCLMPTGGGKSMC 69 (524)
Q Consensus 52 ~g~d~lv~apTGsGKTl~ 69 (524)
+|.-+.+.+|+|+|||..
T Consensus 30 ~Ge~~~iiG~sGsGKSTL 47 (240)
T d3dhwc1 30 AGQIYGVIGASGAGKSTL 47 (240)
T ss_dssp SSCEEEEEESTTSSHHHH
T ss_pred CCCEEEEECCCCCCHHHH
Confidence 466788999999999954
No 236
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]}
Probab=34.20 E-value=15 Score=33.15 Aligned_cols=15 Identities=20% Similarity=-0.073 Sum_probs=11.8
Q ss_pred EEEEcCCCChHHHHH
Q 009843 56 CFCLMPTGGGKSMCY 70 (524)
Q Consensus 56 ~lv~apTGsGKTl~~ 70 (524)
+-+.|+.|+|||...
T Consensus 83 IGIaG~sgSGKSTla 97 (308)
T d1sq5a_ 83 ISIAGSVAVGKSTTA 97 (308)
T ss_dssp EEEEECTTSSHHHHH
T ss_pred EEEeCCCCCCCcHHH
Confidence 457789999999654
No 237
>d1o5za1 c.59.1.2 (A:294-430) Folylpolyglutamate synthetase, C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=34.10 E-value=33 Score=26.11 Aligned_cols=49 Identities=18% Similarity=0.291 Sum_probs=31.2
Q ss_pred EEEEeccccccccCCCCHHHHHHHHHHHHhCCCCCEEEEeccCChhHHHHHHHHhC
Q 009843 161 LVAIDEAHCISSWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLC 216 (524)
Q Consensus 161 ~iViDEaH~i~~~g~~fr~~~~~l~~l~~~~~~~~ii~lSAT~~~~~~~~i~~~l~ 216 (524)
.+++|=||.... ++ .-+..+...+++.+++++-+.........+...+.
T Consensus 12 ~iilD~AHN~~a----~~---~l~~~l~~~~~~~~~~~i~g~~~dkd~~~~l~~l~ 60 (137)
T d1o5za1 12 MYILDGAHNPHG----AE---SLVRSLKLYFNGEPLSLVIGILDDKNREDILRKYT 60 (137)
T ss_dssp EEEECCCCSHHH----HH---HHHHHHHHHCTTCCEEEEECCCTTSCHHHHHGGGT
T ss_pred EEEEECCCCHHH----HH---HHHHHHHhhhccccceeeecccccccHHHHHHHHH
Confidence 578999999654 22 33455667778777776666655555555555543
No 238
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=33.75 E-value=11 Score=32.56 Aligned_cols=25 Identities=36% Similarity=0.534 Sum_probs=17.6
Q ss_pred cCCCEEEEcCCCChHHHHH-HHHHhc
Q 009843 52 SGRDCFCLMPTGGGKSMCY-QIPALA 76 (524)
Q Consensus 52 ~g~d~lv~apTGsGKTl~~-~lp~l~ 76 (524)
.|.-+.+.+|.|+|||... ++.-+.
T Consensus 25 ~Ge~~~liGpsGaGKSTll~~l~Gl~ 50 (229)
T d3d31a2 25 SGEYFVILGPTGAGKTLFLELIAGFH 50 (229)
T ss_dssp TTCEEEEECCCTHHHHHHHHHHHTSS
T ss_pred CCCEEEEECCCCCcHHHHHHHHhcCc
Confidence 4666889999999999544 333343
No 239
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=33.70 E-value=10 Score=33.71 Aligned_cols=18 Identities=28% Similarity=0.235 Sum_probs=14.5
Q ss_pred CCCEEEEcCCCChHHHHH
Q 009843 53 GRDCFCLMPTGGGKSMCY 70 (524)
Q Consensus 53 g~d~lv~apTGsGKTl~~ 70 (524)
|.-+.+++|+|+|||...
T Consensus 62 Ge~vaivG~nGsGKSTLl 79 (281)
T d1r0wa_ 62 GEMLAITGSTGSGKTSLL 79 (281)
T ss_dssp TCEEEEEESTTSSHHHHH
T ss_pred CCEEEEECCCCChHHHHH
Confidence 566789999999999543
No 240
>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=33.59 E-value=66 Score=27.27 Aligned_cols=67 Identities=15% Similarity=0.317 Sum_probs=46.8
Q ss_pred HHHHHHhcCCccEEEEeCccccHHHHHHHHHhCCCceEEEcCCCCHHH-HHHHHHHHh--cCCCcEEEEcc
Q 009843 249 LCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA-RSSVLDDWI--SSRKQVVVATV 316 (524)
Q Consensus 249 l~~~l~~~~~~~~IIf~~s~~~~e~l~~~L~~~g~~~~~~h~~l~~~~-R~~~~~~f~--~g~~~VlVaT~ 316 (524)
+...+.+. +-.+++...+.+.++++++.|++.|..+..+..+++..+ -....+... -|.+++||..-
T Consensus 26 ~a~~la~~-Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvnna 95 (251)
T d2c07a1 26 IAKMLAKS-VSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNA 95 (251)
T ss_dssp HHHHHTTT-SSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECC
T ss_pred HHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCceeeeecc
Confidence 33444333 446777777888899999999998889999999987543 233333332 38999999854
No 241
>d1rrma_ e.22.1.2 (A:) Lactaldehyde reductase FucO {Escherichia coli [TaxId: 562]}
Probab=33.07 E-value=30 Score=31.84 Aligned_cols=72 Identities=17% Similarity=0.176 Sum_probs=53.7
Q ss_pred hhHHHHHHHHHHhcCCccEEEEeCcc----ccHHHHHHHHHhCCCceEEEcCC---CCHHHHHHHHHHHhcCCCcEEEE
Q 009843 243 DDAYADLCSVLKANGDTCAIVYCLER----TTCDELSAYLSAGGISCAAYHAG---LNDKARSSVLDDWISSRKQVVVA 314 (524)
Q Consensus 243 ~~~~~~l~~~l~~~~~~~~IIf~~s~----~~~e~l~~~L~~~g~~~~~~h~~---l~~~~R~~~~~~f~~g~~~VlVa 314 (524)
...++.+.++++..+.++++|.+... ...+++.+.|.+.|+.+..|.+- =+.++=.+..+.++..+.++|||
T Consensus 15 ~g~l~~l~~~l~~~G~k~~Livt~~~~~~~g~~~~v~~~L~~~gi~~~vf~~v~~~p~~~~v~~~~~~~~~~~~D~Iia 93 (385)
T d1rrma_ 15 RGAVGALTDEVKRRGYQKALIVTDKTLVQCGVVAKVTDKMDAAGLAWAIYDGVVPNPTITVVKEGLGVFQNSGADYLIA 93 (385)
T ss_dssp TTGGGGHHHHHHHHTCCEEEEECBHHHHHTTHHHHHHHHHHHTTCEEEEECBCCSSCBHHHHHHHHHHHHHHTCSEEEE
T ss_pred cCHHHHHHHHHHHcCCCEEEEEECcchhhCcHHHHHHHHHHHcCCeEEEEcCccCCCCHHHHHHHhhhhhccCCCEEEe
Confidence 45667788888887777888877532 23477888899999988777652 24566677888888889999998
No 242
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=31.63 E-value=15 Score=30.06 Aligned_cols=30 Identities=23% Similarity=0.392 Sum_probs=18.3
Q ss_pred EEEEcCCCChHHHHHHHHHhcC--CCeEEEeCcH
Q 009843 56 CFCLMPTGGGKSMCYQIPALAK--PGIVLVVSPL 87 (524)
Q Consensus 56 ~lv~apTGsGKTl~~~lp~l~~--~~~~lvl~P~ 87 (524)
+.+.|+.|+|||.. +-.|.+ +...++.-|.
T Consensus 12 I~ieG~~GsGKTTl--~~~L~~~l~~~~~~~ep~ 43 (197)
T d2vp4a1 12 VLIEGNIGSGKTTY--LNHFEKYKNDICLLTEPV 43 (197)
T ss_dssp EEEECSTTSCHHHH--HHTTGGGTTTEEEECCTH
T ss_pred EEEECCCCCCHHHH--HHHHHHHhCCcEEEEEec
Confidence 56789999999964 333433 3344444453
No 243
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=31.09 E-value=9.7 Score=35.35 Aligned_cols=15 Identities=33% Similarity=0.417 Sum_probs=12.5
Q ss_pred EEEEcCCCChHHHHH
Q 009843 56 CFCLMPTGGGKSMCY 70 (524)
Q Consensus 56 ~lv~apTGsGKTl~~ 70 (524)
.++.||+|+|||...
T Consensus 28 ~~i~G~NGsGKS~il 42 (427)
T d1w1wa_ 28 TSIIGPNGSGKSNMM 42 (427)
T ss_dssp EEEECSTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 478899999999653
No 244
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=31.08 E-value=8.5 Score=32.03 Aligned_cols=15 Identities=20% Similarity=0.350 Sum_probs=13.4
Q ss_pred CCEEEEcCCCChHHH
Q 009843 54 RDCFCLMPTGGGKSM 68 (524)
Q Consensus 54 ~d~lv~apTGsGKTl 68 (524)
|.+++.|++|+|||.
T Consensus 1 k~V~ivG~~~~GKTs 15 (207)
T d2fh5b1 1 RAVLFVGLCDSGKTL 15 (207)
T ss_dssp CEEEEECSTTSSHHH
T ss_pred CEEEEECCCCCCHHH
Confidence 468999999999995
No 245
>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium lapideum [TaxId: 32060]}
Probab=31.03 E-value=43 Score=30.45 Aligned_cols=147 Identities=16% Similarity=0.186 Sum_probs=69.0
Q ss_pred CCCChhHHHHHHHHHH-----cCCCCCC--HHHHHHHHHHHc---C-----CCEEEEcCCCChHHHHHHHHHhcC-CCeE
Q 009843 18 KPLHEKEALVKLLRWH-----FGHAQFR--DKQLDAIQAVLS---G-----RDCFCLMPTGGGKSMCYQIPALAK-PGIV 81 (524)
Q Consensus 18 ~~~~~~~~~~~~l~~~-----fg~~~~r--~~Q~~~i~~~l~---g-----~d~lv~apTGsGKTl~~~lp~l~~-~~~~ 81 (524)
.+++.++.+.+++++. ++|.... +.=++++...+. | .++++. +|+--.+..++-++.. +..+
T Consensus 40 p~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~~~i~it--~G~~~al~~~~~~~~~~gd~V 117 (388)
T d1j32a_ 40 PDFNTPKHIVEAAKAALEQGKTRYGPAAGEPRLREAIAQKLQRDNGLCYGADNILVT--NGGKQSIFNLMLAMIEPGDEV 117 (388)
T ss_dssp CSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEE--SHHHHHHHHHHHHHCCTTCEE
T ss_pred CCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCceEEEc--CCHHHHHHHHHHHHhCCCCEE
Confidence 4566667777776653 2344333 334566654432 2 245542 2333333333445544 4577
Q ss_pred EEeCcHHHHHHHHHHHHHHcCCceeEeccCCCH---HHHHHHHHHhhcCCCccc-EEEeCcc----cccChhhHHHHHhh
Q 009843 82 LVVSPLIALMENQVIGLKEKGIAGEFLSSTQTM---QVKTKIYEDLDSGKPSLR-LLYVTPE----LTATPGFMSKLKKI 153 (524)
Q Consensus 82 lvl~P~~~L~~q~~~~l~~~gi~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~-ll~~tpe----~v~t~~~~~~l~~~ 153 (524)
++-.|+-....+.+. ..|.....+...... .....+...+. +..+ +++++|. .+.+...+..+.+.
T Consensus 118 lv~~P~y~~~~~~~~---~~~~~~v~~~~~~~~~~~~d~~~l~~~~~---~~~~~~~~~~P~NPTG~~~~~~~~~~l~~~ 191 (388)
T d1j32a_ 118 IIPAPFWVSYPEMVK---LAEGTPVILPTTVETQFKVSPEQIRQAIT---PKTKLLVFNTPSNPTGMVYTPDEVRAIAQV 191 (388)
T ss_dssp EEESSCCTHHHHHHH---HTTCEEEEECCCGGGTTCCCHHHHHHHCC---TTEEEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred EEcCCCcHHHHHHHH---HhcCeEEEEecccccccCCCHHHHHHhCC---CCCeEEEECCCCCCCCcccchhhhhhhhcc
Confidence 777887655544333 333333222211100 01112222222 2233 5667775 44455555555443
Q ss_pred hccCCccEEEEecccccccc
Q 009843 154 HSRGLLNLVAIDEAHCISSW 173 (524)
Q Consensus 154 ~~~~~l~~iViDEaH~i~~~ 173 (524)
..... -+||.||++....+
T Consensus 192 ~~~~~-~~iI~De~Y~~~~~ 210 (388)
T d1j32a_ 192 AVEAG-LWVLSDEIYEKILY 210 (388)
T ss_dssp HHHHT-CEEEEECTTTTCBC
T ss_pred cccCC-eEEEchhhhhcccc
Confidence 32211 26899999865443
No 246
>d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]}
Probab=30.89 E-value=1.2e+02 Score=27.43 Aligned_cols=140 Identities=15% Similarity=0.104 Sum_probs=69.8
Q ss_pred CHHHHHHHHHHHHhC---CCCC-EEEEeccCChhHHHHHHHHhCCCCCeEEeccCCCCcceEEEEeeCchhhHHHHHHHH
Q 009843 177 FRPSYRKLSSLRNYL---PDVP-ILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLCSV 252 (524)
Q Consensus 177 fr~~~~~l~~l~~~~---~~~~-ii~lSAT~~~~~~~~i~~~l~l~~~~~~~~~~~~~~l~~~v~~~~~~~~~~~~l~~~ 252 (524)
-||+|-.+..+...+ ++.. .++.|++- .+...++.+.+++.....+........+ .......+..+.+.
T Consensus 9 tR~e~~kl~pli~~l~~~~~~~~~li~tG~H-~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~i~~~~~~ 81 (376)
T d1f6da_ 9 TRPEAIKMAPLVHALAKDPFFEAKVCVTAQH-REMLDQVLKLFSIVPDYDLNIMQPGQGL------TEITCRILEGLKPI 81 (376)
T ss_dssp SHHHHHHHHHHHHHHHHCTTCEEEEEECCTT-GGGGHHHHHHTTCCCSEECCCCSSSSCH------HHHHHHHHHHHHHH
T ss_pred hhHhHHHHHHHHHHHHhCCCCCEEEEEcCCC-HHHHHHHHHhcCCCCCcccccCCCCCCH------HHHHHHHHHhhHHH
Confidence 588888877766654 3444 45556654 2344555566554322211111111100 01112344556666
Q ss_pred HHhcCCccEEEEeCccccHHHHHHHH--HhCCCceEEEcCCCCHHHH-----HHHHHHHhcCCCcEEEEcc------ccc
Q 009843 253 LKANGDTCAIVYCLERTTCDELSAYL--SAGGISCAAYHAGLNDKAR-----SSVLDDWISSRKQVVVATV------AFG 319 (524)
Q Consensus 253 l~~~~~~~~IIf~~s~~~~e~l~~~L--~~~g~~~~~~h~~l~~~~R-----~~~~~~f~~g~~~VlVaT~------a~~ 319 (524)
+.+..+.-++|+-. ..+.++..+ ...+++++.+|||+....- ++..+...+.-.++.+++. ...
T Consensus 82 ~~~~kPD~v~v~GD---r~e~la~a~aa~~~~ipi~HiegG~~s~~~~~~~pde~~R~~iskls~~hf~~~~~~~~~L~~ 158 (376)
T d1f6da_ 82 LAEFKPDVVLVHGD---TTTTLATSLAAFYQRIPVGHVEAGLRTGDLYSPWPEEANRTLTGHLAMYHFSPTETSRQNLLR 158 (376)
T ss_dssp HHHHCCSEEEEETT---CHHHHHHHHHHHTTTCCEEEESCCCCCSCTTSSTTHHHHHHHHHHTCSEEEESSHHHHHHHHH
T ss_pred HHhccCcceeeecc---ccchhhHHHHHHhhCceEEEEecccccccccccCchhhhhhhhccceeEEEeccHHHHhHHHh
Confidence 66666665566553 345555554 3569999999997543211 2222222333344555543 456
Q ss_pred ccccCCC
Q 009843 320 MGIDRKD 326 (524)
Q Consensus 320 ~GiD~p~ 326 (524)
||.+...
T Consensus 159 ~G~~~~~ 165 (376)
T d1f6da_ 159 ENVADSR 165 (376)
T ss_dssp TTCCGGG
T ss_pred cCCCccc
Confidence 7776543
No 247
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=30.83 E-value=14 Score=31.95 Aligned_cols=19 Identities=32% Similarity=0.431 Sum_probs=15.5
Q ss_pred cCCCEEEEcCCCChHHHHH
Q 009843 52 SGRDCFCLMPTGGGKSMCY 70 (524)
Q Consensus 52 ~g~d~lv~apTGsGKTl~~ 70 (524)
.|.-+.+.+|.|+|||...
T Consensus 31 ~Ge~~~liGpsGaGKSTLl 49 (239)
T d1v43a3 31 DGEFLVLLGPSGCGKTTTL 49 (239)
T ss_dssp TTCEEEEECCTTSSHHHHH
T ss_pred CCCEEEEECCCCChHHHHH
Confidence 4666789999999999654
No 248
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.76 E-value=44 Score=27.57 Aligned_cols=16 Identities=25% Similarity=0.050 Sum_probs=12.3
Q ss_pred CCCEEEEcCCCChHHH
Q 009843 53 GRDCFCLMPTGGGKSM 68 (524)
Q Consensus 53 g~d~lv~apTGsGKTl 68 (524)
|+=+.+.++-|+|||.
T Consensus 3 G~lI~ieG~dGsGKsT 18 (209)
T d1nn5a_ 3 GALIVLEGVDRAGKST 18 (209)
T ss_dssp CCEEEEEESTTSSHHH
T ss_pred eeEEEEECCCCCCHHH
Confidence 4445566999999996
No 249
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=29.90 E-value=12 Score=32.52 Aligned_cols=20 Identities=20% Similarity=0.301 Sum_probs=16.0
Q ss_pred cCCCEEEEcCCCChHHHHHH
Q 009843 52 SGRDCFCLMPTGGGKSMCYQ 71 (524)
Q Consensus 52 ~g~d~lv~apTGsGKTl~~~ 71 (524)
.|.-+-+.+|.|+|||..+-
T Consensus 31 ~Gei~~liGpnGaGKSTl~~ 50 (240)
T d1ji0a_ 31 RGQIVTLIGANGAGKTTTLS 50 (240)
T ss_dssp TTCEEEEECSTTSSHHHHHH
T ss_pred CCCEEEEECCCCCcHHHHHH
Confidence 46667899999999997543
No 250
>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.74 E-value=1.2e+02 Score=25.32 Aligned_cols=86 Identities=9% Similarity=0.022 Sum_probs=51.1
Q ss_pred HcCCCEEEEcCC-CChHHHHHHHHHhcCCCeEEEeCcHHHHHHHHHHHHHHcCCceeEeccCCCHH-HHHHHHHHhhcCC
Q 009843 51 LSGRDCFCLMPT-GGGKSMCYQIPALAKPGIVLVVSPLIALMENQVIGLKEKGIAGEFLSSTQTMQ-VKTKIYEDLDSGK 128 (524)
Q Consensus 51 l~g~d~lv~apT-GsGKTl~~~lp~l~~~~~~lvl~P~~~L~~q~~~~l~~~gi~~~~~~~~~~~~-~~~~~~~~l~~~~ 128 (524)
+.||-++|.+.+ |-|+.++..+ ...+-.++++.-..+=+++..++++..|..+.......... ......+......
T Consensus 5 l~Gkv~lITGas~GIG~~ia~~l--a~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~ 82 (244)
T d1yb1a_ 5 VTGEIVLITGAGHGIGRLTAYEF--AKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI 82 (244)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHH--HHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHH--HHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence 467888887755 4898887665 34566667666666666777788888776655544443333 3333344333322
Q ss_pred CcccEEEeCc
Q 009843 129 PSLRLLYVTP 138 (524)
Q Consensus 129 ~~~~ll~~tp 138 (524)
..+++++.+.
T Consensus 83 g~idilinna 92 (244)
T d1yb1a_ 83 GDVSILVNNA 92 (244)
T ss_dssp CCCSEEEECC
T ss_pred CCCceeEeec
Confidence 3355555443
No 251
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]}
Probab=29.73 E-value=25 Score=28.95 Aligned_cols=17 Identities=18% Similarity=0.155 Sum_probs=13.8
Q ss_pred CCCEEEEcCCCChHHHH
Q 009843 53 GRDCFCLMPTGGGKSMC 69 (524)
Q Consensus 53 g~d~lv~apTGsGKTl~ 69 (524)
|+=+.+.|+-|+|||..
T Consensus 2 gkfIviEG~dGsGKsT~ 18 (210)
T d4tmka_ 2 SKYIVIEGLEGAGKTTA 18 (210)
T ss_dssp CCEEEEEECTTSCHHHH
T ss_pred CCEEEEECCCCCCHHHH
Confidence 56577889999999964
No 252
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=29.54 E-value=8.3 Score=34.63 Aligned_cols=15 Identities=27% Similarity=0.155 Sum_probs=12.6
Q ss_pred EEEEcCCCChHHHHH
Q 009843 56 CFCLMPTGGGKSMCY 70 (524)
Q Consensus 56 ~lv~apTGsGKTl~~ 70 (524)
.+++||+|+|||...
T Consensus 29 nvi~G~NGsGKS~il 43 (329)
T g1xew.1 29 TAIVGANGSGKSNIG 43 (329)
T ss_dssp EEEEECTTSSSHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 378999999999753
No 253
>d1z5za1 c.37.1.19 (A:663-906) Helicase of the SNF2/Rad54 hamily {Sulfolobus solfataricus [TaxId: 2287]}
Probab=29.49 E-value=1.1e+02 Score=25.29 Aligned_cols=81 Identities=11% Similarity=0.153 Sum_probs=54.0
Q ss_pred CCCChHHHHHH--H-HHhcCCCeEEEeCcHHHHHHHHHHHHHH-cCCceeEeccCCCHHHHHHHHHHhhcCCCcccEEEe
Q 009843 61 PTGGGKSMCYQ--I-PALAKPGIVLVVSPLIALMENQVIGLKE-KGIAGEFLSSTQTMQVKTKIYEDLDSGKPSLRLLYV 136 (524)
Q Consensus 61 pTGsGKTl~~~--l-p~l~~~~~~lvl~P~~~L~~q~~~~l~~-~gi~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ll~~ 136 (524)
...+||.-... + .....+.++||.+....-+.-....+.. .|+....+++..+...+..+......+. ..+++++
T Consensus 65 ~~~S~K~~~l~~~l~~~~~~g~kviIFs~~~~~~~~l~~~l~~~~~~~~~~i~G~~~~~~R~~~i~~F~~~~-~~~vll~ 143 (244)
T d1z5za1 65 VRRSGKMIRTMEIIEEALDEGDKIAIFTQFVDMGKIIRNIIEKELNTEVPFLYGELSKKERDDIISKFQNNP-SVKFIVL 143 (244)
T ss_dssp STTCHHHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHHHHHHCSCCCEECTTSCHHHHHHHHHHHHHCT-TCCEEEE
T ss_pred hhhhhHHHHHHHHHHhhcccccceEEEeeceehHHHHHHHHHhhccceEEEEecccchhccchhhhhhhccc-cchhccc
Confidence 35678874321 2 2234577899999877765544445544 5888888999999988888888776543 3567777
Q ss_pred Cccccc
Q 009843 137 TPELTA 142 (524)
Q Consensus 137 tpe~v~ 142 (524)
++...+
T Consensus 144 ~~~~~g 149 (244)
T d1z5za1 144 SVKAGG 149 (244)
T ss_dssp ECCTTC
T ss_pred cccccc
Confidence 765443
No 254
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=29.45 E-value=11 Score=32.85 Aligned_cols=20 Identities=30% Similarity=0.474 Sum_probs=16.2
Q ss_pred cCCCEEEEcCCCChHHHHHH
Q 009843 52 SGRDCFCLMPTGGGKSMCYQ 71 (524)
Q Consensus 52 ~g~d~lv~apTGsGKTl~~~ 71 (524)
+|.-+.+.+|+|+|||...-
T Consensus 30 ~Ge~~~iiG~sGsGKSTll~ 49 (242)
T d1oxxk2 30 NGERFGILGPSGAGKTTFMR 49 (242)
T ss_dssp TTCEEEEECSCHHHHHHHHH
T ss_pred CCCEEEEECCCCCcHHHHHH
Confidence 46778899999999996543
No 255
>d2gc6a1 c.59.1.2 (A:297-425) Folylpolyglutamate synthetase, C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=28.92 E-value=34 Score=25.51 Aligned_cols=39 Identities=18% Similarity=0.235 Sum_probs=19.2
Q ss_pred EEEEeccccccccCCCCHHHHHHHHHHHHhCCCCCEEEEeccCChh
Q 009843 161 LVAIDEAHCISSWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPK 206 (524)
Q Consensus 161 ~iViDEaH~i~~~g~~fr~~~~~l~~l~~~~~~~~ii~lSAT~~~~ 206 (524)
.+++|=||.-.. ++.. +..+....+...++.+.++...+
T Consensus 13 ~iilD~AHN~~~----~~~l---~~~l~~~~~~~~~~v~g~~~dKd 51 (129)
T d2gc6a1 13 LIVIDGAHNPDG----INGL---ITALKQLFSQPITVIAGILADKD 51 (129)
T ss_dssp TEEECCCCSHHH----HHHH---HHHHHHHCSSCCEEEECCC----
T ss_pred cEEEECCCCHHH----HHHH---hhccccccchhhhhhccccCCcc
Confidence 489999998543 2222 22333344444456666665443
No 256
>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}
Probab=28.63 E-value=1.6e+02 Score=24.72 Aligned_cols=67 Identities=10% Similarity=0.161 Sum_probs=46.0
Q ss_pred HHHHHHhcCCccEEEEeCccccHHHHHHHHHhCCCceEEEcCCCCHHHH-HHHHHHHh---cCCCcEEEEcc
Q 009843 249 LCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR-SSVLDDWI---SSRKQVVVATV 316 (524)
Q Consensus 249 l~~~l~~~~~~~~IIf~~s~~~~e~l~~~L~~~g~~~~~~h~~l~~~~R-~~~~~~f~---~g~~~VlVaT~ 316 (524)
+...+.+.+ -.+++...+.+..+++.+.+++.+..+..+..+++..+- +...+... .|.+++||...
T Consensus 22 ia~~la~~G-~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~idilinna 92 (258)
T d1ae1a_ 22 IVEELAGLG-ARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNA 92 (258)
T ss_dssp HHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCCEEEECC
T ss_pred HHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCCcEEEeccc
Confidence 343444433 467888888888899999999999999899999875543 33333333 36788888753
No 257
>d1yt8a3 c.46.1.2 (A:373-529) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=28.30 E-value=11 Score=29.96 Aligned_cols=38 Identities=11% Similarity=-0.035 Sum_probs=31.6
Q ss_pred cCCccEEEEeCccccHHHHHHHHHhCCC-ceEEEcCCCC
Q 009843 256 NGDTCAIVYCLERTTCDELSAYLSAGGI-SCAAYHAGLN 293 (524)
Q Consensus 256 ~~~~~~IIf~~s~~~~e~l~~~L~~~g~-~~~~~h~~l~ 293 (524)
....++|+||.+-..+...+..|...|. ++..+.||+.
T Consensus 56 ~~~~~vv~~c~~g~rs~~~a~~l~~~G~~~v~~L~GG~~ 94 (157)
T d1yt8a3 56 GTAERYVLTCGSSLLARFAVAEVQALSGKPVFLLDGGTS 94 (157)
T ss_dssp CCCSEEEEECSSSHHHHHHHHHHHHHHCSCEEEETTHHH
T ss_pred ccCcceeeccCCcchHHHHHHHHhcccCceEEEecCCHH
Confidence 4567899999998889999999988876 6888899863
No 258
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=28.24 E-value=13 Score=31.16 Aligned_cols=26 Identities=31% Similarity=0.314 Sum_probs=17.0
Q ss_pred EEEEcCCCChHHHHHHHHHhcCCCeEEE
Q 009843 56 CFCLMPTGGGKSMCYQIPALAKPGIVLV 83 (524)
Q Consensus 56 ~lv~apTGsGKTl~~~lp~l~~~~~~lv 83 (524)
+.+.|+.|||||.+.- .+...|..++
T Consensus 6 IgitG~igSGKStv~~--~l~~~G~~vi 31 (208)
T d1vhta_ 6 VALTGGIGSGKSTVAN--AFADLGINVI 31 (208)
T ss_dssp EEEECCTTSCHHHHHH--HHHHTTCEEE
T ss_pred EEEECCCcCCHHHHHH--HHHHCCCcEE
Confidence 3478999999998654 3444454333
No 259
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho, ATPase domain {Escherichia coli [TaxId: 562]}
Probab=28.01 E-value=23 Score=31.48 Aligned_cols=26 Identities=19% Similarity=0.374 Sum_probs=21.2
Q ss_pred HHHHHHH---cCCCEEEEcCCCChHHHHH
Q 009843 45 DAIQAVL---SGRDCFCLMPTGGGKSMCY 70 (524)
Q Consensus 45 ~~i~~~l---~g~d~lv~apTGsGKTl~~ 70 (524)
++|..+. +|+..++.+|.|+|||...
T Consensus 32 r~ID~l~PigrGQr~~I~g~~g~GKT~l~ 60 (289)
T d1xpua3 32 RVLDLASPIGRGQRGLIVAPPKAGKTMLL 60 (289)
T ss_dssp HHHHHHSCCBTTCEEEEEECSSSSHHHHH
T ss_pred eeeeecccccCCCeeeEeCCCCCCHHHHH
Confidence 5666654 7899999999999999654
No 260
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain {Human papillomavirus type 18 [TaxId: 333761]}
Probab=27.97 E-value=18 Score=30.41 Aligned_cols=47 Identities=26% Similarity=0.366 Sum_probs=27.6
Q ss_pred ChhHHHHHHHHHHcCCCCCCHHHHHHHHHHHcC---CC-EEEEcCCCChHHHHH
Q 009843 21 HEKEALVKLLRWHFGHAQFRDKQLDAIQAVLSG---RD-CFCLMPTGGGKSMCY 70 (524)
Q Consensus 21 ~~~~~~~~~l~~~fg~~~~r~~Q~~~i~~~l~g---~d-~lv~apTGsGKTl~~ 70 (524)
+-...+...|+- -|++ +-++ ..++..++.| ++ +++.+|+++|||+-+
T Consensus 20 g~w~~I~~~l~~-q~i~-~~~F-l~~l~~~l~~~PKkn~i~~~GP~~TGKS~f~ 70 (205)
T d1tuea_ 20 GDWRPIVQFLRY-QQIE-FITF-LGALKSFLKGTPKKNCLVFCGPANTGKSYFG 70 (205)
T ss_dssp CCSHHHHHHHHH-TTCC-HHHH-HHHHHHHHHTCTTCSEEEEESCGGGCHHHHH
T ss_pred CCHHHHHHHHHh-cCcc-HHHH-HHHHHHHHcCCCCceEEEEECCCCccHHHHH
Confidence 334666666664 2443 2221 2344555655 34 678899999999653
No 261
>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=27.84 E-value=1.2e+02 Score=26.87 Aligned_cols=141 Identities=13% Similarity=0.053 Sum_probs=66.6
Q ss_pred CCChhHHHHHHHHHH-----cCCCCCC--HHHHHHHHHHHc---------CCCEEEEcCCCChHHHHHH-HHHhc-CCCe
Q 009843 19 PLHEKEALVKLLRWH-----FGHAQFR--DKQLDAIQAVLS---------GRDCFCLMPTGGGKSMCYQ-IPALA-KPGI 80 (524)
Q Consensus 19 ~~~~~~~~~~~l~~~-----fg~~~~r--~~Q~~~i~~~l~---------g~d~lv~apTGsGKTl~~~-lp~l~-~~~~ 80 (524)
+++.++.+.+.+++. ++|.... +-=+++|...+. ..++++. +++....++ +-++. .+..
T Consensus 36 ~~~~p~~v~~~~~~a~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~~t---~G~~~~l~~~~~~l~~~gd~ 112 (388)
T d1gdea_ 36 DFDTPQHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQNGIEADPKTEIMVL---LGANQAFLMGLSAFLKDGEE 112 (388)
T ss_dssp CSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEE---SSTTHHHHHHHTTTCCTTCE
T ss_pred CCCCCHHHHHHHHHHHhcCccCCCCCcCCHHHHHHHHHHHHhhccccCCChheeeec---cCcchHHHHHHHHhcCCCCE
Confidence 455566666666543 2454433 233455544331 1345543 222232222 22333 3567
Q ss_pred EEEeCcHHHHHHHHHHHHHHcCCceeEeccC------CCHHHHHHHHHHhhcCCCccc-EEEeCcc----cccChhhHHH
Q 009843 81 VLVVSPLIALMENQVIGLKEKGIAGEFLSST------QTMQVKTKIYEDLDSGKPSLR-LLYVTPE----LTATPGFMSK 149 (524)
Q Consensus 81 ~lvl~P~~~L~~q~~~~l~~~gi~~~~~~~~------~~~~~~~~~~~~l~~~~~~~~-ll~~tpe----~v~t~~~~~~ 149 (524)
+++-.|+-....... +..|.....+... ...+ .+...+ .. ..+ +++++|. .+.++..+..
T Consensus 113 vlv~~P~y~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~---~l~~~~-~~--~~~~i~~~~P~NPtG~~~s~~~~~~ 183 (388)
T d1gdea_ 113 VLIPTPAFVSYAPAV---ILAGGKPVEVPTYEEDEFRLNVD---ELKKYV-TD--KTRALIINSPCNPTGAVLTKKDLEE 183 (388)
T ss_dssp EEEEESCCTTHHHHH---HHHTCEEEEEECCGGGTTCCCHH---HHHHHC-CT--TEEEEEEESSCTTTCCCCCHHHHHH
T ss_pred EEECCCCcHHHHHHH---HHcCCEEEEeecccccCCCCCHH---HHHHhC-cc--CCeEEEECCCcCCCCCcCCHHHHHH
Confidence 778789876554433 3345544333221 1221 122222 22 233 4556664 4555555555
Q ss_pred HHhhhccCCccEEEEeccccccc
Q 009843 150 LKKIHSRGLLNLVAIDEAHCISS 172 (524)
Q Consensus 150 l~~~~~~~~l~~iViDEaH~i~~ 172 (524)
+.+...... -+||.||+|.-..
T Consensus 184 l~~~a~~~~-~~vi~De~y~~~~ 205 (388)
T d1gdea_ 184 IADFVVEHD-LIVISDEVYEHFI 205 (388)
T ss_dssp HHHHHHHTT-CEEEEECTTTTCB
T ss_pred HHHHHHHcC-CEEEEEcCChhhh
Confidence 544333221 3588899997554
No 262
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]}
Probab=27.79 E-value=14 Score=30.66 Aligned_cols=25 Identities=24% Similarity=0.219 Sum_probs=16.8
Q ss_pred EEEcCCCChHHHHHHHHHhcCCCeEEE
Q 009843 57 FCLMPTGGGKSMCYQIPALAKPGIVLV 83 (524)
Q Consensus 57 lv~apTGsGKTl~~~lp~l~~~~~~lv 83 (524)
-+.|+.|||||.+.. .+...|..++
T Consensus 6 gITG~igSGKStv~~--~l~~~G~~vi 30 (205)
T d1jjva_ 6 GLTGGIGSGKTTIAN--LFTDLGVPLV 30 (205)
T ss_dssp EEECSTTSCHHHHHH--HHHTTTCCEE
T ss_pred EEECCCCCCHHHHHH--HHHHCCCeEE
Confidence 478999999998654 3444454443
No 263
>d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Trypanosoma cruzi [TaxId: 5693]}
Probab=27.65 E-value=1.1e+02 Score=27.61 Aligned_cols=144 Identities=16% Similarity=0.117 Sum_probs=69.6
Q ss_pred CChhHHHHHHHHHH------cCCCCC--CHHHHHHHHHHHcC--------------CCEEEEcCCCChHHHH-HHHHHhc
Q 009843 20 LHEKEALVKLLRWH------FGHAQF--RDKQLDAIQAVLSG--------------RDCFCLMPTGGGKSMC-YQIPALA 76 (524)
Q Consensus 20 ~~~~~~~~~~l~~~------fg~~~~--r~~Q~~~i~~~l~g--------------~d~lv~apTGsGKTl~-~~lp~l~ 76 (524)
....+.+.+.+++. +||... .+.=++++...++. .++++ |.+++... .++-++.
T Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~~~~~~~I~i---t~G~~~al~~~~~~l~ 122 (412)
T d1bw0a_ 46 LLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVL---CSGGSHGILMAITAIC 122 (412)
T ss_dssp SCCCHHHHHHHHHHHHTTCSSSCCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEEE---ESHHHHHHHHHHHHHC
T ss_pred ccccHHHHHHHHHHhhCCCCCCCCCCcCCHHHHHHHHHHHHHhcCcccccCCCCCCCeEEE---ecccccchhhhhhhhh
Confidence 34456666666543 355544 24445566444321 24555 34444433 3344454
Q ss_pred C-CCeEEEeCcHHHHHHHHHHHHHHcCCceeEeccCCC---HHHHHHHHHHhhcCCCccc-EEEeCcc----cccChhhH
Q 009843 77 K-PGIVLVVSPLIALMENQVIGLKEKGIAGEFLSSTQT---MQVKTKIYEDLDSGKPSLR-LLYVTPE----LTATPGFM 147 (524)
Q Consensus 77 ~-~~~~lvl~P~~~L~~q~~~~l~~~gi~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~-ll~~tpe----~v~t~~~~ 147 (524)
. +..+++-.|+-.-.... ++..|........... ......+.... .+..+ +++++|. .+.+...+
T Consensus 123 ~~Gd~Vlv~~P~y~~~~~~---~~~~G~~~~~v~~~~~~~~~~~~~~l~~~~---~~~~~~~~l~np~NPtG~~~~~~~~ 196 (412)
T d1bw0a_ 123 DAGDYALVPQPGFPHYETV---CKAYGIGMHFYNCRPENDWEADLDEIRRLK---DDKTKLLIVTNPSNPCGSNFSRKHV 196 (412)
T ss_dssp CTTCEEEEEESCCTHHHHH---HHHTTCEEEEEEEEGGGTTEECHHHHHHHC---CTTEEEEEEESSCTTTCCCCCHHHH
T ss_pred ccccceeeeeccchhhhhh---hhccCccccccccccccccchhhHHHHhhh---hccccccccccccccccccchhhhc
Confidence 4 55788888987655443 3445655443321110 00111111111 12233 4556665 44455555
Q ss_pred HHHHhhhccCCccEEEEecccccccc
Q 009843 148 SKLKKIHSRGLLNLVAIDEAHCISSW 173 (524)
Q Consensus 148 ~~l~~~~~~~~l~~iViDEaH~i~~~ 173 (524)
..+.+...... -+||.||++.-..+
T Consensus 197 ~~i~~~~~~~~-~~vi~De~Y~~~~~ 221 (412)
T d1bw0a_ 197 EDIVRLAEELR-LPLFSDEIYAGMVF 221 (412)
T ss_dssp HHHHHHHHHHT-CCEEEECTTTTCBC
T ss_pred cccccccccCC-eeeechhhHHHhcc
Confidence 55544333222 26899999976543
No 264
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]}
Probab=27.61 E-value=11 Score=29.22 Aligned_cols=13 Identities=15% Similarity=0.199 Sum_probs=11.8
Q ss_pred EEEEcCCCChHHH
Q 009843 56 CFCLMPTGGGKSM 68 (524)
Q Consensus 56 ~lv~apTGsGKTl 68 (524)
++++|+.|+|||-
T Consensus 3 ivlvG~~~vGKSs 15 (160)
T d1r8sa_ 3 ILMVGLDAAGKTT 15 (160)
T ss_dssp EEEECSTTSSHHH
T ss_pred EEEECCCCCCHHH
Confidence 6899999999994
No 265
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]}
Probab=27.59 E-value=4.1 Score=33.40 Aligned_cols=14 Identities=29% Similarity=0.178 Sum_probs=11.2
Q ss_pred EEEcCCCChHHHHH
Q 009843 57 FCLMPTGGGKSMCY 70 (524)
Q Consensus 57 lv~apTGsGKTl~~ 70 (524)
++.||+|+|||...
T Consensus 28 vi~G~NGsGKStil 41 (222)
T d1qhla_ 28 TLSGGNGAGKSTTM 41 (222)
T ss_dssp HHHSCCSHHHHHHH
T ss_pred EEECCCCCCHHHHH
Confidence 56789999999653
No 266
>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}
Probab=27.48 E-value=1.1e+02 Score=22.33 Aligned_cols=46 Identities=17% Similarity=0.275 Sum_probs=31.0
Q ss_pred CccEEEEeccccccccCCCCHHHHHHHHHHHHhCCCCCEEEEeccCChhHHHH
Q 009843 158 LLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKD 210 (524)
Q Consensus 158 ~l~~iViDEaH~i~~~g~~fr~~~~~l~~l~~~~~~~~ii~lSAT~~~~~~~~ 210 (524)
.++++++| .+ +-++ + -+.-+..++...++.|++++||.........
T Consensus 45 ~~dlillD-~~-mP~~--~---G~el~~~lr~~~~~~pvi~lt~~~~~~~~~~ 90 (119)
T d1peya_ 45 RPDLVLLD-MK-IPGM--D---GIEILKRMKVIDENIRVIIMTAYGELDMIQE 90 (119)
T ss_dssp CCSEEEEE-SC-CTTC--C---HHHHHHHHHHHCTTCEEEEEESSCCHHHHHH
T ss_pred CCCEEEEe-cc-CCCC--C---HHHHHHHHHHhCCCCcEEEEecCCCHHHHHH
Confidence 37888888 22 2221 1 1355677778888999999999887765443
No 267
>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}
Probab=27.47 E-value=1.3e+02 Score=25.32 Aligned_cols=69 Identities=16% Similarity=0.247 Sum_probs=44.7
Q ss_pred HHHHHHhcCCccEEE-EeCccccHHHHHHHHHhCCCceEEEcCCCCHH-HHHHHHHHHh--cCCCcEEEEcccc
Q 009843 249 LCSVLKANGDTCAIV-YCLERTTCDELSAYLSAGGISCAAYHAGLNDK-ARSSVLDDWI--SSRKQVVVATVAF 318 (524)
Q Consensus 249 l~~~l~~~~~~~~II-f~~s~~~~e~l~~~L~~~g~~~~~~h~~l~~~-~R~~~~~~f~--~g~~~VlVaT~a~ 318 (524)
+.+.+...+ -.+++ +.++.+.++++.+.+++.|..+..+.++++.. +-....+... -|.++++|.....
T Consensus 34 ia~~la~~G-a~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~idilV~nag~ 106 (272)
T d1g0oa_ 34 MAMELGRRG-CKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGV 106 (272)
T ss_dssp HHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHcC-CEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhCCCCcccccccc
Confidence 444444443 34444 34456678889999999998999999988653 3334444443 2789999887643
No 268
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=27.35 E-value=17 Score=31.40 Aligned_cols=15 Identities=53% Similarity=0.902 Sum_probs=12.0
Q ss_pred EEEEcCCCChHHHHH
Q 009843 56 CFCLMPTGGGKSMCY 70 (524)
Q Consensus 56 ~lv~apTGsGKTl~~ 70 (524)
+.+.+|.|+|||...
T Consensus 27 ~~liGpnGaGKSTll 41 (240)
T d2onka1 27 CVLLGPTGAGKSVFL 41 (240)
T ss_dssp EEEECCTTSSHHHHH
T ss_pred EEEECCCCChHHHHH
Confidence 457899999999644
No 269
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=27.05 E-value=14 Score=32.13 Aligned_cols=15 Identities=27% Similarity=0.266 Sum_probs=13.2
Q ss_pred CEEEEcCCCChHHHH
Q 009843 55 DCFCLMPTGGGKSMC 69 (524)
Q Consensus 55 d~lv~apTGsGKTl~ 69 (524)
.+++.+.||+|||..
T Consensus 34 ~I~LvG~tg~GKSSl 48 (257)
T d1h65a_ 34 TILVMGKGGVGKSST 48 (257)
T ss_dssp EEEEEESTTSSHHHH
T ss_pred EEEEECCCCCcHHHH
Confidence 589999999999964
No 270
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]}
Probab=26.26 E-value=17 Score=31.83 Aligned_cols=19 Identities=26% Similarity=0.323 Sum_probs=15.4
Q ss_pred cCCCEEEEcCCCChHHHHH
Q 009843 52 SGRDCFCLMPTGGGKSMCY 70 (524)
Q Consensus 52 ~g~d~lv~apTGsGKTl~~ 70 (524)
.|.-+-+.+|.|+|||...
T Consensus 27 ~GEi~~iiG~sGsGKSTLl 45 (258)
T d1b0ua_ 27 AGDVISIIGSSGSGKSTFL 45 (258)
T ss_dssp TTCEEEEECCTTSSHHHHH
T ss_pred CCCEEEEECCCCCcHHHHH
Confidence 4666789999999999644
No 271
>d1uara2 c.46.1.2 (A:145-285) Sulfurtransferase {Thermus thermophilus [TaxId: 274]}
Probab=26.25 E-value=17 Score=28.38 Aligned_cols=46 Identities=17% Similarity=0.239 Sum_probs=32.5
Q ss_pred HHHHHHHh---cCCccEEEEeCccccHHHHHHHHHh-CCC-ceEEEcCCCC
Q 009843 248 DLCSVLKA---NGDTCAIVYCLERTTCDELSAYLSA-GGI-SCAAYHAGLN 293 (524)
Q Consensus 248 ~l~~~l~~---~~~~~~IIf~~s~~~~e~l~~~L~~-~g~-~~~~~h~~l~ 293 (524)
.+.+++.. .++.++|+||++=..+-..+-.|.. .|+ .+..|.|++.
T Consensus 76 ~~~~~~~~~gi~~d~~vV~yC~~G~~As~~~~~l~~~~G~~~v~~ydGs~~ 126 (141)
T d1uara2 76 ELRALYEPLGITKDKDIVVYCRIAERSSHSWFVLKYLLGYPHVKNYDGSWT 126 (141)
T ss_dssp HHHHHHGGGTCCTTSEEEEECSSHHHHHHHHHHHHTTSCCSCEEEESSHHH
T ss_pred HHHHHHHHhCCCCCCeEEEEecCcchHHHHHHHHHHHcCCCCeeEeCCcHH
Confidence 34444443 3567899999987677677777775 687 4888999864
No 272
>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}
Probab=26.17 E-value=96 Score=26.01 Aligned_cols=34 Identities=18% Similarity=0.184 Sum_probs=21.9
Q ss_pred HcCCCEEEEcCC---CChHHHHHHHHHhcCCCeEEEeCc
Q 009843 51 LSGRDCFCLMPT---GGGKSMCYQIPALAKPGIVLVVSP 86 (524)
Q Consensus 51 l~g~d~lv~apT---GsGKTl~~~lp~l~~~~~~lvl~P 86 (524)
++||-++|.+.+ |-|+..+-.+ ...+-.+++..-
T Consensus 6 L~gK~alITGas~~~GIG~aiA~~l--a~~Ga~V~i~~~ 42 (256)
T d1ulua_ 6 LSGKKALVMGVTNQRSLGFAIAAKL--KEAGAEVALSYQ 42 (256)
T ss_dssp CTTCEEEEESCCCSSSHHHHHHHHH--HHTTCEEEEEES
T ss_pred CCCCEEEEECCCCCchHHHHHHHHH--HHCCCEEEEEeC
Confidence 468889999987 5789876544 334445544433
No 273
>d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY {Escherichia coli [TaxId: 562]}
Probab=26.09 E-value=1.1e+02 Score=26.78 Aligned_cols=143 Identities=14% Similarity=0.126 Sum_probs=68.1
Q ss_pred CCChhHHHHHHHHHHc-----CCCCCCH-HHHHHHHHHHc---C-----CCEEEEcCCCChHHHH-HHHHHhcC-CCeEE
Q 009843 19 PLHEKEALVKLLRWHF-----GHAQFRD-KQLDAIQAVLS---G-----RDCFCLMPTGGGKSMC-YQIPALAK-PGIVL 82 (524)
Q Consensus 19 ~~~~~~~~~~~l~~~f-----g~~~~r~-~Q~~~i~~~l~---g-----~d~lv~apTGsGKTl~-~~lp~l~~-~~~~l 82 (524)
+++..+.+.+++++.. ||..... .-++++...+. | .++++ |.++.... .++.++.. +..++
T Consensus 10 df~~p~~i~eal~~~~~~~~~~Y~~~~g~~lr~~ia~~~~~~~g~~~~~~~i~i---t~G~~~~l~~~~~~l~~~gd~Vl 86 (361)
T d1d2fa_ 10 DFATAPCIIEALNQRLMHGVFGYSRWKNDEFLAAIAHWFSTQHYTAIDSQTVVY---GPSVIYMVSELIRQWSETGEGVV 86 (361)
T ss_dssp SSCCCHHHHHHHHHHHTTCCCCCCCSCCHHHHHHHHHHHHHHSCCCCCGGGEEE---ESCHHHHHHHHHHHSSCTTCEEE
T ss_pred CCCCCHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEE---eCCHHHHHHHHhhhccccccccc
Confidence 4677777888877743 4543332 12344443332 2 23444 33344433 34445544 45788
Q ss_pred EeCcHHHHHHHHHHHHHHcCCceeEecc---C----CCHHHHHHHHHHhhcCCCcccEE-EeCcc----cccChhhHHHH
Q 009843 83 VVSPLIALMENQVIGLKEKGIAGEFLSS---T----QTMQVKTKIYEDLDSGKPSLRLL-YVTPE----LTATPGFMSKL 150 (524)
Q Consensus 83 vl~P~~~L~~q~~~~l~~~gi~~~~~~~---~----~~~~~~~~~~~~l~~~~~~~~ll-~~tpe----~v~t~~~~~~l 150 (524)
+..|+-....... +..|........ . ..... ....+... +.+++ ..+|. .+.+...+..+
T Consensus 87 v~~P~y~~~~~~~---~~~g~~~~~v~~~~~~~~~~~d~~~---~~~~~~~~--~~~~i~l~~p~NPTG~~~s~~~~~~i 158 (361)
T d1d2fa_ 87 IHTPAYDAFYKAI---EGNQRTVMPVALEKQADGWFCDMGK---LEAVLAKP--ECKIMLLCSPQNPTGKVWTCDELEIM 158 (361)
T ss_dssp EEESCCHHHHHHH---HHTTCEEEEEECEECSSSEECCHHH---HHHHHTST--TEEEEEEESSCTTTCCCCCTTHHHHH
T ss_pred cccccccchhHHH---HhhcceEEeeccccccccccccccc---chhhcccC--CceeEEecccccccccccchhhhhhh
Confidence 8889876554433 334444322211 1 12222 22223222 35454 44444 33344445555
Q ss_pred HhhhccCCccEEEEecccccccc
Q 009843 151 KKIHSRGLLNLVAIDEAHCISSW 173 (524)
Q Consensus 151 ~~~~~~~~l~~iViDEaH~i~~~ 173 (524)
.+...... -++|+||++.-..+
T Consensus 159 ~~~~~~~~-~~lI~De~y~~~~~ 180 (361)
T d1d2fa_ 159 ADLCERHG-VRVISDEIHMDMVW 180 (361)
T ss_dssp HHHHHHTT-CEEEEECTTTTCBC
T ss_pred hhhhhhhh-eeeeeccccccccc
Confidence 44332222 25788999876543
No 274
>d1vp8a_ c.49.1.2 (A:) Hypothetical protein AF0103 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=25.81 E-value=30 Score=28.23 Aligned_cols=72 Identities=11% Similarity=0.081 Sum_probs=42.4
Q ss_pred hHHHHHHHHHHhcCCccEEEEeCccccHHHHHHHHHhCCCceEEEcCC--------CCHHHHHHHHHHHhcCCCcEEEEc
Q 009843 244 DAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAG--------LNDKARSSVLDDWISSRKQVVVAT 315 (524)
Q Consensus 244 ~~~~~l~~~l~~~~~~~~IIf~~s~~~~e~l~~~L~~~g~~~~~~h~~--------l~~~~R~~~~~~f~~g~~~VlVaT 315 (524)
+.++...+..++.+-..++|-..+=+.+..+.+.++...+-++.||.| |+++. .+.+.+...+|+-+|
T Consensus 19 ~~l~~a~~rA~Elgi~~iVvAStsG~TA~~~~e~~~g~~lvvVth~~GF~~pg~~e~~~e~----~~~L~~~G~~V~t~t 94 (190)
T d1vp8a_ 19 ETLRLAVERAKELGIKHLVVASSYGDTAMKALEMAEGLEVVVVTYHTGFVREGENTMPPEV----EEELRKRGAKIVRQS 94 (190)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHHHCTTCEEEEEECCTTSSSTTCCSSCHHH----HHHHHHTTCEEEECC
T ss_pred HHHHHHHHHHHHcCCCeEEEEeCCcHHHHHHHHHhcCCeEEEEecccCCCCCCcccCCHHH----HHHHHHcCCEEEEec
Confidence 444444455555444444444444566777888775444556777776 44444 444556677888888
Q ss_pred cccc
Q 009843 316 VAFG 319 (524)
Q Consensus 316 ~a~~ 319 (524)
-+++
T Consensus 95 H~lS 98 (190)
T d1vp8a_ 95 HILS 98 (190)
T ss_dssp CTTT
T ss_pred cccc
Confidence 7654
No 275
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]}
Probab=25.52 E-value=14 Score=30.08 Aligned_cols=15 Identities=27% Similarity=0.078 Sum_probs=11.8
Q ss_pred EEEcCCCChHHHHHH
Q 009843 57 FCLMPTGGGKSMCYQ 71 (524)
Q Consensus 57 lv~apTGsGKTl~~~ 71 (524)
-+.|+.|||||.+.-
T Consensus 7 gitG~~gSGKstva~ 21 (191)
T d1uf9a_ 7 GITGNIGSGKSTVAA 21 (191)
T ss_dssp EEEECTTSCHHHHHH
T ss_pred EEECCCCCCHHHHHH
Confidence 366999999997643
No 276
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=25.26 E-value=15 Score=31.79 Aligned_cols=15 Identities=27% Similarity=0.330 Sum_probs=12.6
Q ss_pred EEEEcCCCChHHHHH
Q 009843 56 CFCLMPTGGGKSMCY 70 (524)
Q Consensus 56 ~lv~apTGsGKTl~~ 70 (524)
.++++|.|+|||...
T Consensus 26 n~IvG~NGsGKStiL 40 (292)
T g1f2t.1 26 NLIIGQNGSGKSSLL 40 (292)
T ss_dssp EEEECCTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 379999999999753
No 277
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]}
Probab=25.25 E-value=13 Score=29.32 Aligned_cols=14 Identities=21% Similarity=0.218 Sum_probs=12.3
Q ss_pred CEEEEcCCCChHHH
Q 009843 55 DCFCLMPTGGGKSM 68 (524)
Q Consensus 55 d~lv~apTGsGKTl 68 (524)
.++++|+.|+|||.
T Consensus 4 ki~ivG~~~~GKTs 17 (165)
T d1ksha_ 4 RLLMLGLDNAGKTT 17 (165)
T ss_dssp EEEEECSTTSSHHH
T ss_pred EEEEECCCCCCHHH
Confidence 37899999999994
No 278
>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}
Probab=25.08 E-value=94 Score=26.22 Aligned_cols=66 Identities=9% Similarity=0.083 Sum_probs=46.1
Q ss_pred HHHHHHhcCCccEEEEeCccccHHHHHHHHHhCCCceEEEcCCCCHHH-HHHHHHHHh--cCCCcEEEEc
Q 009843 249 LCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA-RSSVLDDWI--SSRKQVVVAT 315 (524)
Q Consensus 249 l~~~l~~~~~~~~IIf~~s~~~~e~l~~~L~~~g~~~~~~h~~l~~~~-R~~~~~~f~--~g~~~VlVaT 315 (524)
+...+.+. +-.+++...+.+.++++++.|++.|..+..+..+++..+ -+...+... -|.+++||..
T Consensus 18 ia~~la~~-Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilVnn 86 (257)
T d2rhca1 18 IARRLGKE-GLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNN 86 (257)
T ss_dssp HHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEEC
T ss_pred HHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEec
Confidence 33334433 346777777888899999999999989999999986543 333333333 3889999975
No 279
>d1kgsa2 c.23.1.1 (A:2-123) PhoB receiver domain {Thermotoga maritima [TaxId: 2336]}
Probab=24.86 E-value=1.2e+02 Score=22.06 Aligned_cols=44 Identities=23% Similarity=0.329 Sum_probs=29.4
Q ss_pred CCccEEEEeccccccccCCCCHHHHHHHHHHHHhCCCCCEEEEeccCChhH
Q 009843 157 GLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKV 207 (524)
Q Consensus 157 ~~l~~iViDEaH~i~~~g~~fr~~~~~l~~l~~~~~~~~ii~lSAT~~~~~ 207 (524)
..++++++|= .+-+.+ .+..+..++...+..|++++||......
T Consensus 44 ~~~dlillD~--~mp~~~-----g~~~~~~lr~~~~~~piI~lt~~~~~~~ 87 (122)
T d1kgsa2 44 EPFDVVILDI--MLPVHD-----GWEILKSMRESGVNTPVLMLTALSDVEY 87 (122)
T ss_dssp SCCSEEEEES--CCSSSC-----HHHHHHHHHHTTCCCCEEEEESSCHHHH
T ss_pred hCcccccccc--ccccch-----hHHHHHHHHhcCCCCcEEEEcCCCCHHH
Confidence 3588999982 222211 1355666777778999999999876544
No 280
>d2a9pa1 c.23.1.1 (A:2-118) DNA-binding response regulator MicA, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}
Probab=24.76 E-value=1.2e+02 Score=21.94 Aligned_cols=44 Identities=18% Similarity=0.273 Sum_probs=28.0
Q ss_pred CccEEEEeccccccccCCCCHHHHHHHHHHHHhCCCCCEEEEeccCChhHHH
Q 009843 158 LLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQK 209 (524)
Q Consensus 158 ~l~~iViDEaH~i~~~g~~fr~~~~~l~~l~~~~~~~~ii~lSAT~~~~~~~ 209 (524)
..+++++|= + +.+.. + +..+..+++ .++.|++++|+........
T Consensus 44 ~~dlillD~-~-mp~~~-G----~~~~~~i~~-~~~~pvI~lt~~~~~~~~~ 87 (117)
T d2a9pa1 44 QPDIIILDL-M-LPEID-G----LEVAKTIRK-TSSVPILMLSAKDSEFDKV 87 (117)
T ss_dssp CCSEEEECS-S-CSSSC-H----HHHHHHHHT-TCCCCEEEEESCCSHHHHH
T ss_pred CCCEEEecc-c-cCCCC-c----cHHHHHHHh-CCCCCEEEEecCCCHHHHH
Confidence 478899983 2 33211 1 244455544 5789999999998776544
No 281
>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.66 E-value=95 Score=26.10 Aligned_cols=69 Identities=7% Similarity=0.057 Sum_probs=49.6
Q ss_pred HHHHHHHhcCCccEEEEeCccccHHHHHHHHHhCCCceEEEcCCCCHHHH-HHHHHHHh--cCCCcEEEEccc
Q 009843 248 DLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR-SSVLDDWI--SSRKQVVVATVA 317 (524)
Q Consensus 248 ~l~~~l~~~~~~~~IIf~~s~~~~e~l~~~L~~~g~~~~~~h~~l~~~~R-~~~~~~f~--~g~~~VlVaT~a 317 (524)
.+...+.+. +-.+++...+.+.++++++.+.+.|..+..+..+++..+. ....+... .|.++++|....
T Consensus 22 ~ia~~la~~-G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~idilinnag 93 (244)
T d1yb1a_ 22 LTAYEFAKL-KSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAG 93 (244)
T ss_dssp HHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSEEEECCC
T ss_pred HHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCceeEeecc
Confidence 344444443 4568888888889999999999999899999999986643 33444332 588999986543
No 282
>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}
Probab=24.40 E-value=1.2e+02 Score=25.38 Aligned_cols=57 Identities=19% Similarity=0.268 Sum_probs=40.9
Q ss_pred ccEEE-EeCccccHHHHHHHHHhCCCceEEEcCCCCHHHH-HHHHHHHh--cCCCcEEEEc
Q 009843 259 TCAIV-YCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR-SSVLDDWI--SSRKQVVVAT 315 (524)
Q Consensus 259 ~~~II-f~~s~~~~e~l~~~L~~~g~~~~~~h~~l~~~~R-~~~~~~f~--~g~~~VlVaT 315 (524)
-.+++ +.++.+.++++.+.+++.|.++..+..+++..+- +...+... -|.+++||..
T Consensus 26 a~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnn 86 (244)
T d1edoa_ 26 CKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNN 86 (244)
T ss_dssp CEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSEEEEC
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCccccc
Confidence 34544 5667778999999999888899999999875533 33334333 3899999975
No 283
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]}
Probab=24.30 E-value=15 Score=31.49 Aligned_cols=19 Identities=32% Similarity=0.433 Sum_probs=15.5
Q ss_pred cCCCEEEEcCCCChHHHHH
Q 009843 52 SGRDCFCLMPTGGGKSMCY 70 (524)
Q Consensus 52 ~g~d~lv~apTGsGKTl~~ 70 (524)
.|.-+-+.+|.|+|||..+
T Consensus 24 ~Gei~~iiG~nGaGKSTLl 42 (231)
T d1l7vc_ 24 AGEILHLVGPNGAGKSTLL 42 (231)
T ss_dssp TTCEEECBCCTTSSHHHHH
T ss_pred CCCEEEEECCCCCcHHHHH
Confidence 5667788999999999644
No 284
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=24.12 E-value=11 Score=30.06 Aligned_cols=14 Identities=21% Similarity=0.195 Sum_probs=12.6
Q ss_pred CEEEEcCCCChHHH
Q 009843 55 DCFCLMPTGGGKSM 68 (524)
Q Consensus 55 d~lv~apTGsGKTl 68 (524)
.++++|++|+|||.
T Consensus 15 kI~lvG~~~vGKTs 28 (186)
T d1f6ba_ 15 KLVFLGLDNAGKTT 28 (186)
T ss_dssp EEEEEEETTSSHHH
T ss_pred EEEEECCCCCCHHH
Confidence 48999999999995
No 285
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=24.09 E-value=14 Score=28.51 Aligned_cols=13 Identities=23% Similarity=0.245 Sum_probs=11.8
Q ss_pred EEEEcCCCChHHH
Q 009843 56 CFCLMPTGGGKSM 68 (524)
Q Consensus 56 ~lv~apTGsGKTl 68 (524)
+++++++|+|||-
T Consensus 3 I~liG~~nvGKSS 15 (166)
T d2qtvb1 3 LLFLGLDNAGKTT 15 (166)
T ss_dssp EEEECSTTSSHHH
T ss_pred EEEECCCCCCHHH
Confidence 6899999999994
No 286
>d1vlja_ e.22.1.2 (A:) NADH-dependent butanol dehydrogenase A (TM0820) {Thermotoga maritima [TaxId: 2336]}
Probab=23.86 E-value=1e+02 Score=28.02 Aligned_cols=72 Identities=10% Similarity=0.034 Sum_probs=51.3
Q ss_pred hHHHHHHHHHHhcCCccEEEEeCc--cc---cHHHHHHHHHhCCCceEEEcCCC---CHHHHHHHHHHHhcCCCcEEEEc
Q 009843 244 DAYADLCSVLKANGDTCAIVYCLE--RT---TCDELSAYLSAGGISCAAYHAGL---NDKARSSVLDDWISSRKQVVVAT 315 (524)
Q Consensus 244 ~~~~~l~~~l~~~~~~~~IIf~~s--~~---~~e~l~~~L~~~g~~~~~~h~~l---~~~~R~~~~~~f~~g~~~VlVaT 315 (524)
..++.|.++++..+.++++|.+.. .+ ..+++.+.|.+.|+.+..+.+-. +.+.=.+..+.++..+.++|||-
T Consensus 20 g~~~~l~~~l~~~g~~rvliVt~~~~~~~~g~~~~l~~~L~~~gi~~~~f~~v~~~pt~~~v~~~~~~~~~~~~D~IIav 99 (398)
T d1vlja_ 20 GTIPKIGEEIKNAGIRKVLFLYGGGSIKKNGVYDQVVDSLKKHGIEWVEVSGVKPNPVLSKVHEAVEVAKKEKVEAVLGV 99 (398)
T ss_dssp TCGGGHHHHHHHTTCCEEEEEECSSHHHHSSHHHHHHHHHHHTTCEEEEECCCCSSCBHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CHHHHHHHHHHhcCCCeEEEEECCcHHHHhhHHHHHHHHHHhcCCeEEEEcCccCCCCHHHHHHHhhhcccccCceEEec
Confidence 456668888888776677666633 22 35889999999999988876532 34555667777888888999883
No 287
>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}
Probab=23.86 E-value=81 Score=26.71 Aligned_cols=66 Identities=11% Similarity=0.144 Sum_probs=45.3
Q ss_pred HHHHHHhcCCccEEEEeCccccHHHHHHHHHhCCCceEEEcCCCCHHH-HHHHHHHHh--cCCCcEEEEc
Q 009843 249 LCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA-RSSVLDDWI--SSRKQVVVAT 315 (524)
Q Consensus 249 l~~~l~~~~~~~~IIf~~s~~~~e~l~~~L~~~g~~~~~~h~~l~~~~-R~~~~~~f~--~g~~~VlVaT 315 (524)
+...+.+. +-.+++...+.+.++++.+.|++.|-.+..+..+++..+ -+...+... -|.+++||..
T Consensus 27 ia~~la~~-Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~iDilvnn 95 (255)
T d1fmca_ 27 IAITFATA-GASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDILVNN 95 (255)
T ss_dssp HHHHHHTT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEEC
T ss_pred HHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEeeeC
Confidence 34444443 345666666778889999999999889999999987543 233333333 2789999975
No 288
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=23.75 E-value=15 Score=29.27 Aligned_cols=14 Identities=21% Similarity=0.166 Sum_probs=12.1
Q ss_pred CEEEEcCCCChHHH
Q 009843 55 DCFCLMPTGGGKSM 68 (524)
Q Consensus 55 d~lv~apTGsGKTl 68 (524)
.+.+.+++|+|||-
T Consensus 2 ~V~liG~~n~GKSs 15 (171)
T d1mkya1 2 TVLIVGRPNVGKST 15 (171)
T ss_dssp EEEEECCTTSSHHH
T ss_pred EEEEECCCCCCHHH
Confidence 36889999999994
No 289
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=23.59 E-value=17 Score=32.16 Aligned_cols=15 Identities=27% Similarity=0.330 Sum_probs=12.5
Q ss_pred EEEEcCCCChHHHHH
Q 009843 56 CFCLMPTGGGKSMCY 70 (524)
Q Consensus 56 ~lv~apTGsGKTl~~ 70 (524)
.+++||.|+|||-..
T Consensus 26 ~vi~G~NgsGKTtil 40 (369)
T g1ii8.1 26 NLIIGQNGSGKSSLL 40 (369)
T ss_dssp EEEECCTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 578899999999653
No 290
>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}
Probab=23.53 E-value=1.1e+02 Score=25.73 Aligned_cols=67 Identities=10% Similarity=0.139 Sum_probs=46.4
Q ss_pred HHHHHHhcCCccEEEEeCccccHHHHHHHHHhCCCceEEEcCCCCHHHH-HHHHHHHh--cCCCcEEEEcc
Q 009843 249 LCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR-SSVLDDWI--SSRKQVVVATV 316 (524)
Q Consensus 249 l~~~l~~~~~~~~IIf~~s~~~~e~l~~~L~~~g~~~~~~h~~l~~~~R-~~~~~~f~--~g~~~VlVaT~ 316 (524)
+...+.+. +-.+++...+.+..+++.+.|.+.|..+..+..+++..+- +...+... -|.+++||..-
T Consensus 17 ia~~la~~-Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnA 86 (255)
T d1gega_ 17 IALRLVKD-GFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNA 86 (255)
T ss_dssp HHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEEEECC
T ss_pred HHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccEEEecc
Confidence 33334443 3467777777788899999999999899999999875443 33333333 38899999763
No 291
>d1c9ka_ c.37.1.11 (A:) Adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase CobU {Salmonella typhimurium [TaxId: 90371]}
Probab=23.45 E-value=33 Score=27.97 Aligned_cols=31 Identities=16% Similarity=0.087 Sum_probs=21.4
Q ss_pred EEEEcCCCChHHHHHHHHHhcCCCeEEEeCcH
Q 009843 56 CFCLMPTGGGKSMCYQIPALAKPGIVLVVSPL 87 (524)
Q Consensus 56 ~lv~apTGsGKTl~~~lp~l~~~~~~lvl~P~ 87 (524)
+||.++..||||- |.--.+...+.++||...
T Consensus 2 iLVtGGarSGKS~-~AE~l~~~~~~~~YiAT~ 32 (180)
T d1c9ka_ 2 ILVTGGARSGKSR-HAEALIGDAPQVLYIATS 32 (180)
T ss_dssp EEEEECTTSSHHH-HHHHHHCSCSSEEEEECC
T ss_pred EEEECCCCccHHH-HHHHHHhcCCCcEEEEcc
Confidence 5899999999995 333334456677777643
No 292
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.32 E-value=16 Score=29.20 Aligned_cols=13 Identities=38% Similarity=0.312 Sum_probs=11.9
Q ss_pred EEEEcCCCChHHH
Q 009843 56 CFCLMPTGGGKSM 68 (524)
Q Consensus 56 ~lv~apTGsGKTl 68 (524)
++++|+.|+|||-
T Consensus 9 I~vvG~~~vGKSS 21 (174)
T d1wmsa_ 9 VILLGDGGVGKSS 21 (174)
T ss_dssp EEEECCTTSSHHH
T ss_pred EEEECCCCCCHHH
Confidence 7899999999994
No 293
>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}
Probab=22.67 E-value=87 Score=26.53 Aligned_cols=67 Identities=10% Similarity=0.190 Sum_probs=44.8
Q ss_pred HHHHHHhcCCccEEEEeCccccHHHHHHHHHhCCCceEEEcCCCCHHH-HHHHHHHHh--cCCCcEEEEcc
Q 009843 249 LCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA-RSSVLDDWI--SSRKQVVVATV 316 (524)
Q Consensus 249 l~~~l~~~~~~~~IIf~~s~~~~e~l~~~L~~~g~~~~~~h~~l~~~~-R~~~~~~f~--~g~~~VlVaT~ 316 (524)
+.+.+.+. +-.+++.-.+.+..+++.+.+.+.|..+..+..+++..+ -+...+... -|.+++||..-
T Consensus 21 ia~~la~~-Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnna 90 (260)
T d1zema1 21 TALRLAEE-GTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNA 90 (260)
T ss_dssp HHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCeehhhh
Confidence 33444443 345666666777888999999999989999999987543 233333322 28899999653
No 294
>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus furiosus [TaxId: 2261]}
Probab=22.52 E-value=65 Score=29.25 Aligned_cols=110 Identities=13% Similarity=0.033 Sum_probs=53.2
Q ss_pred CEEEEcCCCChHHHHHHHHHhcC-CCeEEEeCcHHHHHHHHHHHHHHcCCceeEec---cCCCHHHHHHHHHHhhcCCCc
Q 009843 55 DCFCLMPTGGGKSMCYQIPALAK-PGIVLVVSPLIALMENQVIGLKEKGIAGEFLS---STQTMQVKTKIYEDLDSGKPS 130 (524)
Q Consensus 55 d~lv~apTGsGKTl~~~lp~l~~-~~~~lvl~P~~~L~~q~~~~l~~~gi~~~~~~---~~~~~~~~~~~~~~l~~~~~~ 130 (524)
++++. +|++..+...+.++.. +..+++-.|+-.-.... ++..|.....+. ..............+.. + .
T Consensus 95 ~i~i~--~G~~~~~~~~~~~~~~~Gd~vlv~~P~y~~~~~~---~~~~g~~~v~v~~~~~~~~~~d~~~~~~~~~~-~-~ 167 (395)
T d1xi9a_ 95 DVRVT--AAVTEALQLIFGALLDPGDEILVPGPSYPPYTGL---VKFYGGKPVEYRTIEEEDWQPDIDDIRKKITD-R-T 167 (395)
T ss_dssp GEEEE--SHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHH---HHHTTCEEEEEEEEGGGTSEECHHHHHHHCCT-T-E
T ss_pred ccccc--cccchhhhhhhhhhcCCCCEEEEcCCccccchhh---hhhcCCEEEEEeccccccccchHHHHHHhhcc-c-c
Confidence 45543 4444444444455554 55788889998755543 344454433221 11100011112222221 1 1
Q ss_pred ccEEEeCcc----cccChhhHHHHHhhhccCCccEEEEeccccccc
Q 009843 131 LRLLYVTPE----LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISS 172 (524)
Q Consensus 131 ~~ll~~tpe----~v~t~~~~~~l~~~~~~~~l~~iViDEaH~i~~ 172 (524)
.-+++++|. .+.+...+..+.+...... -+||.||++.-..
T Consensus 168 ~~v~l~~P~NPTG~~~s~~~~~~l~~~~~~~~-~~ii~De~y~~~~ 212 (395)
T d1xi9a_ 168 KAIAVINPNNPTGALYDKKTLEEILNIAGEYE-IPVISDEIYDLMT 212 (395)
T ss_dssp EEEEEESSCTTTCCCCCHHHHHHHHHHHHHHT-CCEEEECTTTTCB
T ss_pred cEEEecCCCCCccchhhHHHHHHHHhhhhhcC-eeEEecccccccc
Confidence 235677775 4455555555544433322 2688999986543
No 295
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.50 E-value=23 Score=29.69 Aligned_cols=32 Identities=19% Similarity=0.140 Sum_probs=20.9
Q ss_pred CCEEEEcCCCChHHHHHHHHHhcC--CCeEEEeCcH
Q 009843 54 RDCFCLMPTGGGKSMCYQIPALAK--PGIVLVVSPL 87 (524)
Q Consensus 54 ~d~lv~apTGsGKTl~~~lp~l~~--~~~~lvl~P~ 87 (524)
+-+.+.|+.|+|||... -.|.+ .+.-+...|.
T Consensus 3 k~I~ieG~dGsGKST~~--~~L~~~l~~~~~~~e~~ 36 (241)
T d1p5zb_ 3 KKISIEGNIAAGKSTFV--NILKQLCEDWEVVPEPV 36 (241)
T ss_dssp EEEEEECSTTSSHHHHH--TTTGGGCTTEEEECCCH
T ss_pred CEEEEECCCCCCHHHHH--HHHHHHHhcCCCeeeee
Confidence 45788999999999643 33332 4555656664
No 296
>g1qtn.1 c.17.1.1 (A:,B:) Caspase-8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.48 E-value=81 Score=26.37 Aligned_cols=37 Identities=8% Similarity=0.026 Sum_probs=30.8
Q ss_pred ccHHHHHHHHHhCCCceEEEcCCCCHHHHHHHHHHHhc
Q 009843 269 TTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWIS 306 (524)
Q Consensus 269 ~~~e~l~~~L~~~g~~~~~~h~~l~~~~R~~~~~~f~~ 306 (524)
.+++.+++.|++.|+.|.. +-+++.++-...++.|.+
T Consensus 43 ~Da~~l~~~l~~lGF~V~~-~~nlt~~~~~~~l~~~~~ 79 (242)
T g1qtn.1 43 LDAGALTTTFEELHFEIKP-HDDCTVEQIYEILKIYQL 79 (242)
T ss_dssp HHHHHHHHHHHHTTCEEEE-EESCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEE-CcCCCHHHHHHHHHHhhh
Confidence 4899999999999998654 458888888888888874
No 297
>d1urha1 c.46.1.2 (A:2-148) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]}
Probab=22.27 E-value=39 Score=26.22 Aligned_cols=51 Identities=22% Similarity=0.201 Sum_probs=35.0
Q ss_pred hHHHHHHHHHHhcCCccEEEEeCcc-ccHHHHHHHHHhCCC-ceEEEcCCCCH
Q 009843 244 DAYADLCSVLKANGDTCAIVYCLER-TTCDELSAYLSAGGI-SCAAYHAGLND 294 (524)
Q Consensus 244 ~~~~~l~~~l~~~~~~~~IIf~~s~-~~~e~l~~~L~~~g~-~~~~~h~~l~~ 294 (524)
+.+..+...+--..+..+||||... ..+-.++-.|+..|. +|..|.||+..
T Consensus 71 ~~~~~~l~~~Gi~~~~~vVvY~~~~~~~A~r~~~~L~~~G~~~V~vLdGG~~~ 123 (147)
T d1urha1 71 ETFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAG 123 (147)
T ss_dssp HHHHHHHHHTTCCTTSEEEEECSSSCSSHHHHHHHHHHTTCSCEEEETTHHHH
T ss_pred HHHHHHHHHhCcCCCCeEEEEeCCCcccchhHHHHHHhhcccceEEeCChHHH
Confidence 3333333333334567899999654 457788889999997 58899999654
No 298
>d1qo0d_ c.23.1.3 (D:) Positive regulator of the amidase operon AmiR {Pseudomonas aeruginosa [TaxId: 287]}
Probab=22.04 E-value=1.7e+02 Score=22.78 Aligned_cols=89 Identities=18% Similarity=0.154 Sum_probs=54.0
Q ss_pred cCCCeEEEeCcHHHHHHHHHHHHHHcCCceeEeccCCCHHHHHHHHHHhhcCCCcccEEEeCcccccChhhHHHHHhhhc
Q 009843 76 AKPGIVLVVSPLIALMENQVIGLKEKGIAGEFLSSTQTMQVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHS 155 (524)
Q Consensus 76 ~~~~~~lvl~P~~~L~~q~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ll~~tpe~v~t~~~~~~l~~~~~ 155 (524)
.++-++||+=+-.+...-....|+..|..+....+.. +.+.
T Consensus 9 l~~~~iLvvdd~~~~~~~l~~~L~~~G~~v~~~~~~~--------------------------~al~------------- 49 (189)
T d1qo0d_ 9 LRELQVLVLNPPGEVSDALVLQLIRIGCSVRQCWPPP--------------------------EAFD------------- 49 (189)
T ss_dssp GGGCEEEEESCTTHHHHHHHHHHHHHTCEEEEECSCC--------------------------SSCS-------------
T ss_pred ccCCEEEEEeCCHHHHHHHHHHHHHcCCcceecCCHH--------------------------Hhcc-------------
Confidence 3456788887766666666666777665544332211 1111
Q ss_pred cCCccEEEEeccccccccCCCCHHHHHHHHHHHHhCCCCCEEEEeccCChhHHHHHH
Q 009843 156 RGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVM 212 (524)
Q Consensus 156 ~~~l~~iViDEaH~i~~~g~~fr~~~~~l~~l~~~~~~~~ii~lSAT~~~~~~~~i~ 212 (524)
..++++++| .+ +- |. ....+..++...|.+|+|++||-..........
T Consensus 50 -~~~Dlvl~D-~~-mp--~~----~~~~~~~~~~~~p~~pvI~lta~~~~~~~~~al 97 (189)
T d1qo0d_ 50 -VPVDVVFTS-IF-QN--RH----HDEIAALLAAGTPRTTLVALVEYESPAVLSQII 97 (189)
T ss_dssp -SCCSEEEEE-CC-SS--TH----HHHHHHHHHHSCTTCEEEEEECCCSHHHHHHHH
T ss_pred -CCCCEEEEc-CC-CC--Cc----HHHHHHHHHHcCCCCCEEEEeccchHHHHHHHH
Confidence 137888888 33 22 11 124455677788999999999988877655433
No 299
>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}
Probab=21.95 E-value=1.6e+02 Score=24.81 Aligned_cols=67 Identities=7% Similarity=0.098 Sum_probs=42.8
Q ss_pred HHHHHHhcCCccEEEEeCc-cccHHHHHHHHHhCCCceEEEcCCCCHHH-HHHHHHHHh--cCCCcEEEEcc
Q 009843 249 LCSVLKANGDTCAIVYCLE-RTTCDELSAYLSAGGISCAAYHAGLNDKA-RSSVLDDWI--SSRKQVVVATV 316 (524)
Q Consensus 249 l~~~l~~~~~~~~IIf~~s-~~~~e~l~~~L~~~g~~~~~~h~~l~~~~-R~~~~~~f~--~g~~~VlVaT~ 316 (524)
+...+.+. +-++++-..+ .+.++.+.+.+++.|..+..+..+++..+ -+...+... -|.+++||..-
T Consensus 23 ia~~la~~-G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVnnA 93 (261)
T d1geea_ 23 MAIRFATE-KAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNA 93 (261)
T ss_dssp HHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHC-CCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEeeccc
Confidence 33334433 3345554444 34688899999999989999999987543 233333322 37899999864
No 300
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=21.93 E-value=17 Score=28.94 Aligned_cols=13 Identities=15% Similarity=0.174 Sum_probs=12.0
Q ss_pred EEEEcCCCChHHH
Q 009843 56 CFCLMPTGGGKSM 68 (524)
Q Consensus 56 ~lv~apTGsGKTl 68 (524)
++++|+.|+|||.
T Consensus 8 i~vvG~~~vGKTs 20 (169)
T d3raba_ 8 ILIIGNSSVGKTS 20 (169)
T ss_dssp EEEECSTTSSHHH
T ss_pred EEEECCCCcCHHH
Confidence 7899999999994
No 301
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1 ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=21.85 E-value=48 Score=28.96 Aligned_cols=27 Identities=15% Similarity=0.161 Sum_probs=21.3
Q ss_pred HHHHHHH---cCCCEEEEcCCCChHHHHHH
Q 009843 45 DAIQAVL---SGRDCFCLMPTGGGKSMCYQ 71 (524)
Q Consensus 45 ~~i~~~l---~g~d~lv~apTGsGKTl~~~ 71 (524)
++|..++ +|+.+.+.++.|+|||....
T Consensus 57 raID~l~pigkGQr~~If~~~g~GKt~l~~ 86 (276)
T d2jdid3 57 KVVDLLAPYAKGGKIGLFGGAGVGKTVLIM 86 (276)
T ss_dssp HHHHHHSCEETTCEEEEEECTTSSHHHHHH
T ss_pred eeeeeeccccCCCEEEeeCCCCCCHHHHHH
Confidence 5666654 68899999999999996543
No 302
>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}
Probab=21.85 E-value=1.6e+02 Score=24.63 Aligned_cols=68 Identities=18% Similarity=0.239 Sum_probs=43.2
Q ss_pred HHHHHHhcCCccEEE-EeCccccHHHHHHHHHhCCCceEEEcCCCCHH-HHHHHHHHHh--cCCCcEEEEccc
Q 009843 249 LCSVLKANGDTCAIV-YCLERTTCDELSAYLSAGGISCAAYHAGLNDK-ARSSVLDDWI--SSRKQVVVATVA 317 (524)
Q Consensus 249 l~~~l~~~~~~~~II-f~~s~~~~e~l~~~L~~~g~~~~~~h~~l~~~-~R~~~~~~f~--~g~~~VlVaT~a 317 (524)
+...+.+.+ -.++| +-.+.+..+.+.+.+.+.|..+..+..+++.. +-....+... .|.+++||..-.
T Consensus 22 ia~~la~~G-~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~idilinnag 93 (259)
T d1ja9a_ 22 IAIELGRRG-ASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSG 93 (259)
T ss_dssp HHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCEEEEECCCC
T ss_pred HHHHHHHcC-CEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcCCCcEEEeccc
Confidence 444444433 34544 34555567899999999999999999998643 3333333332 478888887653
No 303
>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=21.73 E-value=2e+02 Score=23.39 Aligned_cols=66 Identities=14% Similarity=0.007 Sum_probs=45.1
Q ss_pred CCCHHHHHHHHHHHcC--CCEEEEcCCCChHHHHHHHHHhcCCCeEEEeCcHHHHHHHHHHHHHHcCC
Q 009843 38 QFRDKQLDAIQAVLSG--RDCFCLMPTGGGKSMCYQIPALAKPGIVLVVSPLIALMENQVIGLKEKGI 103 (524)
Q Consensus 38 ~~r~~Q~~~i~~~l~g--~d~lv~apTGsGKTl~~~lp~l~~~~~~lvl~P~~~L~~q~~~~l~~~gi 103 (524)
...|.|-+.+..+... -..++...||+|-|.+++.-++..+++++.+-.-..........++..|.
T Consensus 39 ~i~~~~G~lL~~lv~~~kpk~ILEiGt~~G~Sti~la~al~~~g~v~sid~~~~~~~~a~~~~~~~gl 106 (214)
T d2cl5a1 39 NVGDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAGL 106 (214)
T ss_dssp SCHHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHHTC
T ss_pred ccCHHHHHHHHHHHHhhCCCEEEEEccCchhHHHHHHHhCCCccEEEEEeccHHHHHHHHHHHHHcCC
Confidence 3568888888776542 35788889999999888776776677777766544444444445555554
No 304
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]}
Probab=21.69 E-value=13 Score=29.81 Aligned_cols=15 Identities=20% Similarity=0.047 Sum_probs=12.8
Q ss_pred CEEEEcCCCChHHHH
Q 009843 55 DCFCLMPTGGGKSMC 69 (524)
Q Consensus 55 d~lv~apTGsGKTl~ 69 (524)
.++++++||+|||-.
T Consensus 2 ~I~lvG~~nvGKSsL 16 (184)
T d2cxxa1 2 TIIFAGRSNVGKSTL 16 (184)
T ss_dssp EEEEEEBTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 478999999999953
No 305
>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}
Probab=21.64 E-value=1.5e+02 Score=24.61 Aligned_cols=55 Identities=13% Similarity=0.126 Sum_probs=40.5
Q ss_pred EEEEeCccccHHHHHHHHHhCCCceEEEcCCCCHHH-HHHHHHHHh--cCCCcEEEEc
Q 009843 261 AIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA-RSSVLDDWI--SSRKQVVVAT 315 (524)
Q Consensus 261 ~IIf~~s~~~~e~l~~~L~~~g~~~~~~h~~l~~~~-R~~~~~~f~--~g~~~VlVaT 315 (524)
++++..+.+..+++++.+.+.|..+..+..+++..+ -+...+... -|.+++||..
T Consensus 35 v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvnn 92 (240)
T d2bd0a1 35 LVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVERYGHIDCLVNN 92 (240)
T ss_dssp EEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHHTSCCSEEEEC
T ss_pred EEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCcceeecc
Confidence 666777777889999999999989999999987543 333344333 3788888853
No 306
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.45 E-value=18 Score=28.78 Aligned_cols=13 Identities=31% Similarity=0.204 Sum_probs=11.7
Q ss_pred EEEEcCCCChHHH
Q 009843 56 CFCLMPTGGGKSM 68 (524)
Q Consensus 56 ~lv~apTGsGKTl 68 (524)
++++|+.|+|||-
T Consensus 5 i~lvG~~~vGKTs 17 (168)
T d2atva1 5 LAIFGRAGVGKSA 17 (168)
T ss_dssp EEEECCTTSSHHH
T ss_pred EEEECCCCCCHHH
Confidence 6899999999994
No 307
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]}
Probab=21.44 E-value=15 Score=30.05 Aligned_cols=14 Identities=21% Similarity=0.036 Sum_probs=12.3
Q ss_pred CEEEEcCCCChHHH
Q 009843 55 DCFCLMPTGGGKSM 68 (524)
Q Consensus 55 d~lv~apTGsGKTl 68 (524)
.+.++|+||+|||-
T Consensus 25 ~I~lvG~~n~GKST 38 (195)
T d1svia_ 25 EIALAGRSNVGKSS 38 (195)
T ss_dssp EEEEEEBTTSSHHH
T ss_pred EEEEECCCCCCHHH
Confidence 37899999999994
No 308
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=21.41 E-value=18 Score=28.47 Aligned_cols=13 Identities=15% Similarity=0.194 Sum_probs=11.8
Q ss_pred EEEEcCCCChHHH
Q 009843 56 CFCLMPTGGGKSM 68 (524)
Q Consensus 56 ~lv~apTGsGKTl 68 (524)
++++|+.|+|||-
T Consensus 5 v~liG~~~vGKTs 17 (165)
T d1z06a1 5 IIVIGDSNVGKTC 17 (165)
T ss_dssp EEEECCTTSSHHH
T ss_pred EEEECCCCcCHHH
Confidence 7899999999994
No 309
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=21.31 E-value=30 Score=29.04 Aligned_cols=13 Identities=23% Similarity=0.204 Sum_probs=11.1
Q ss_pred EEEEcCCCChHHH
Q 009843 56 CFCLMPTGGGKSM 68 (524)
Q Consensus 56 ~lv~apTGsGKTl 68 (524)
.++.+.-|+|||.
T Consensus 6 ~iitGFLGaGKTT 18 (222)
T d1nija1 6 TLLTGFLGAGKTT 18 (222)
T ss_dssp EEEEESSSSSCHH
T ss_pred EEEeeCCCCCHHH
Confidence 4788899999995
No 310
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=21.30 E-value=18 Score=30.30 Aligned_cols=17 Identities=18% Similarity=0.038 Sum_probs=13.5
Q ss_pred CCEEEEcCCCChHHHHH
Q 009843 54 RDCFCLMPTGGGKSMCY 70 (524)
Q Consensus 54 ~d~lv~apTGsGKTl~~ 70 (524)
.-+.+.|.+|+|||...
T Consensus 25 ~vIwltGlsGsGKTTia 41 (208)
T d1m7ga_ 25 LTIWLTGLSASGKSTLA 41 (208)
T ss_dssp EEEEEECSTTSSHHHHH
T ss_pred eEEEEECCCCCCHHHHH
Confidence 34788899999999543
No 311
>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=21.10 E-value=1.1e+02 Score=23.04 Aligned_cols=58 Identities=12% Similarity=0.076 Sum_probs=39.4
Q ss_pred HHHHHHHHhcCCccEEEEeCccccHHHHHHHHHhCCCceEEEcCCCCHHHHHHHHHHHhcCCC
Q 009843 247 ADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 309 (524)
Q Consensus 247 ~~l~~~l~~~~~~~~IIf~~s~~~~e~l~~~L~~~g~~~~~~h~~l~~~~R~~~~~~f~~g~~ 309 (524)
....+.|++.+-...|+--.+...++.+++.| |+ -.+|++++++++....+.++.+..
T Consensus 27 ~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~l---gI--~~v~~~~~p~~k~~~v~~~q~~~~ 84 (135)
T d2b8ea1 27 KPAVQELKRMGIKVGMITGDNWRSAEAISREL---NL--DLVIAEVLPHQKSEEVKKLQAKEV 84 (135)
T ss_dssp HHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH---TC--SEEECSCCHHHHHHHHHHHTTTSC
T ss_pred HHHHHHHHHcCCEEEEEcCcchhhhhHHHhhh---hh--hhhccccchhHHHHHHHHHHcCCE
Confidence 34555566665544444444555667777665 54 367899999999999999988753
No 312
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]}
Probab=21.06 E-value=43 Score=30.03 Aligned_cols=13 Identities=31% Similarity=0.186 Sum_probs=11.1
Q ss_pred EEEEcCCCChHHH
Q 009843 56 CFCLMPTGGGKSM 68 (524)
Q Consensus 56 ~lv~apTGsGKTl 68 (524)
+-+.+|+|+|||.
T Consensus 57 IgitG~pGaGKST 69 (327)
T d2p67a1 57 LGVTGTPGAGKST 69 (327)
T ss_dssp EEEEECTTSCHHH
T ss_pred EEeeCCCCCCHHH
Confidence 5677999999994
No 313
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=20.91 E-value=18 Score=29.66 Aligned_cols=14 Identities=21% Similarity=0.309 Sum_probs=12.4
Q ss_pred CEEEEcCCCChHHH
Q 009843 55 DCFCLMPTGGGKSM 68 (524)
Q Consensus 55 d~lv~apTGsGKTl 68 (524)
.+++++++|+|||-
T Consensus 5 ~V~lvG~~n~GKTS 18 (209)
T d1nrjb_ 5 SIIIAGPQNSGKTS 18 (209)
T ss_dssp EEEEECSTTSSHHH
T ss_pred EEEEECCCCCCHHH
Confidence 47899999999995
No 314
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
Probab=20.80 E-value=22 Score=30.53 Aligned_cols=19 Identities=26% Similarity=0.363 Sum_probs=14.9
Q ss_pred cCCCEEEEcCCCChHHHHH
Q 009843 52 SGRDCFCLMPTGGGKSMCY 70 (524)
Q Consensus 52 ~g~d~lv~apTGsGKTl~~ 70 (524)
.|.-+-+.+|.|+|||..+
T Consensus 27 ~Gei~glvG~nGaGKSTLl 45 (238)
T d1vpla_ 27 EGEIFGLIGPNGAGKTTTL 45 (238)
T ss_dssp TTCEEEEECCTTSSHHHHH
T ss_pred CCCEEEEECCCCCCHHHHH
Confidence 3555678999999999654
No 315
>g1pyo.1 c.17.1.1 (A:,B:) Caspase-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.79 E-value=71 Score=27.13 Aligned_cols=49 Identities=10% Similarity=0.061 Sum_probs=38.2
Q ss_pred CCccEEEEeCc--------------cccHHHHHHHHHhCCCceEEEcCCCCHHHHHHHHHHHhc
Q 009843 257 GDTCAIVYCLE--------------RTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWIS 306 (524)
Q Consensus 257 ~~~~~IIf~~s--------------~~~~e~l~~~L~~~g~~~~~~h~~l~~~~R~~~~~~f~~ 306 (524)
+.+-+||+.+. ..+++.|++.|++.|+.|. .+-+++.++=...++.|..
T Consensus 25 prG~aLII~N~~f~~~~~l~~r~g~~~Da~~l~~~l~~lGF~V~-~~~nlt~~em~~~l~~f~~ 87 (257)
T g1pyo.1 25 PRGLALVLSNVHFTGEKELEFRSGGDVDHSTLVTLFKLLGYDVH-VLCDQTAQEMQEKLQNFAQ 87 (257)
T ss_dssp SSEEEEEEECCCCCSSSCSCCCTTHHHHHHHHHHHHHHTTEEEE-EEESCCHHHHHHHHHHHHT
T ss_pred cCCEEEEEeCccCCCccCCCCCCCcHHHHHHHHHHHHHCCCEEE-EEecCCHHHHHHHHHHHHh
Confidence 34457887763 2589999999999999875 4558898888889998864
No 316
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=20.78 E-value=24 Score=30.57 Aligned_cols=19 Identities=32% Similarity=0.483 Sum_probs=15.0
Q ss_pred cCCCEEEEcCCCChHHHHH
Q 009843 52 SGRDCFCLMPTGGGKSMCY 70 (524)
Q Consensus 52 ~g~d~lv~apTGsGKTl~~ 70 (524)
.|.-+-+.+|.|+|||..+
T Consensus 29 ~Gei~~liG~nGaGKSTLl 47 (254)
T d1g6ha_ 29 KGDVTLIIGPNGSGKSTLI 47 (254)
T ss_dssp TTCEEEEECSTTSSHHHHH
T ss_pred CCCEEEEECCCCCcHHHHH
Confidence 4566788999999999544
No 317
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=20.61 E-value=18 Score=28.43 Aligned_cols=13 Identities=23% Similarity=0.087 Sum_probs=11.8
Q ss_pred EEEEcCCCChHHH
Q 009843 56 CFCLMPTGGGKSM 68 (524)
Q Consensus 56 ~lv~apTGsGKTl 68 (524)
++++|++|+|||-
T Consensus 5 v~liG~~~vGKSs 17 (164)
T d1z2aa1 5 MVVVGNGAVGKSS 17 (164)
T ss_dssp EEEECSTTSSHHH
T ss_pred EEEECCCCcCHHH
Confidence 7899999999994
No 318
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.46 E-value=19 Score=29.05 Aligned_cols=13 Identities=31% Similarity=0.419 Sum_probs=11.8
Q ss_pred EEEEcCCCChHHH
Q 009843 56 CFCLMPTGGGKSM 68 (524)
Q Consensus 56 ~lv~apTGsGKTl 68 (524)
++++|++|+|||.
T Consensus 8 i~ivG~~~vGKTs 20 (186)
T d2f7sa1 8 LLALGDSGVGKTT 20 (186)
T ss_dssp EEEESCTTSSHHH
T ss_pred EEEECCCCcCHHH
Confidence 7899999999995
No 319
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.19 E-value=19 Score=28.68 Aligned_cols=13 Identities=38% Similarity=0.383 Sum_probs=11.8
Q ss_pred EEEEcCCCChHHH
Q 009843 56 CFCLMPTGGGKSM 68 (524)
Q Consensus 56 ~lv~apTGsGKTl 68 (524)
++++|+.|+|||-
T Consensus 6 ivvvG~~~vGKTs 18 (173)
T d2a5ja1 6 YIIIGDTGVGKSC 18 (173)
T ss_dssp EEEESSTTSSHHH
T ss_pred EEEECCCCcCHHH
Confidence 6899999999994
No 320
>d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]}
Probab=20.14 E-value=1.9e+02 Score=25.67 Aligned_cols=106 Identities=21% Similarity=0.255 Sum_probs=54.4
Q ss_pred CHHHHHHHHHHHHhC---CCCC-EEEEeccCChhHHHHHHHHhCCCCCeEEeccCCCCcceEEEEeeCchhhHHHHHHHH
Q 009843 177 FRPSYRKLSSLRNYL---PDVP-ILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLCSV 252 (524)
Q Consensus 177 fr~~~~~l~~l~~~~---~~~~-ii~lSAT~~~~~~~~i~~~l~l~~~~~~~~~~~~~~l~~~v~~~~~~~~~~~~l~~~ 252 (524)
-||+|-.+..+.+.+ ++.. .++.|++--..... .....++.....+........+ .......+..+.++
T Consensus 11 tR~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~-~~~~~~i~~d~~l~~~~~~~s~------~~~~~~~~~~~~~~ 83 (373)
T d1v4va_ 11 TRPEATKMAPVYLALRGIPGLKPLVLLTGQHREQLRQ-ALSLFGIQEDRNLDVMQERQAL------PDLAARILPQAARA 83 (373)
T ss_dssp SHHHHHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHH-HHHTTTCCCSEECCCCSSCCCH------HHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHhCCCCCEEEEEccCChhhhhC-cchhcCCCccccCCCCCCCCCH------HHHHHHHHHHHhhh
Confidence 588888877776654 3333 56677765332222 2333444322211111111111 01123445566667
Q ss_pred HHhcCCccEEEEeCccccHHHHHHHH--HhCCCceEEEcCCC
Q 009843 253 LKANGDTCAIVYCLERTTCDELSAYL--SAGGISCAAYHAGL 292 (524)
Q Consensus 253 l~~~~~~~~IIf~~s~~~~e~l~~~L--~~~g~~~~~~h~~l 292 (524)
+.+..+.-++|+-.+ .+.++-.+ ...+++++.+|||+
T Consensus 84 l~~~kPD~vlv~GDr---~e~la~a~aa~~~~ipi~HiegG~ 122 (373)
T d1v4va_ 84 LKEMGADYVLVHGDT---LTTFAVAWAAFLEGIPVGHVEAGL 122 (373)
T ss_dssp HHHTTCSEEEEESSC---HHHHHHHHHHHHTTCCEEEETCCC
T ss_pred hhhcCcccccccccC---ccchhHHHHHHHhhhhheeecccc
Confidence 777666656665533 33444333 34589999999964
No 321
>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=20.08 E-value=1.7e+02 Score=24.49 Aligned_cols=67 Identities=4% Similarity=0.077 Sum_probs=46.2
Q ss_pred HHHHHHhcCCccEEEEeCccccHHHHHHHHHhCCCceEEEcCCCCHH-HHHHHHHHHh---cCCCcEEEEcc
Q 009843 249 LCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDK-ARSSVLDDWI---SSRKQVVVATV 316 (524)
Q Consensus 249 l~~~l~~~~~~~~IIf~~s~~~~e~l~~~L~~~g~~~~~~h~~l~~~-~R~~~~~~f~---~g~~~VlVaT~ 316 (524)
+...+.+. +-.+++...+.+.++++++.+.+.+..+..+..+++.. +-+...+... .|.+++||..-
T Consensus 24 iA~~la~~-Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~idilvnnA 94 (259)
T d1xq1a_ 24 IVEEFAGF-GAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNL 94 (259)
T ss_dssp HHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred HHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCCcccccccc
Confidence 33334443 34677777777888999999998888899999998744 3344444443 37899999863
No 322
>d1okga1 c.46.1.2 (A:7-162) 3-mercaptopyruvate sulfurtransferase {Leishmania major [TaxId: 5664]}
Probab=20.04 E-value=54 Score=25.83 Aligned_cols=47 Identities=17% Similarity=0.120 Sum_probs=33.6
Q ss_pred HHHHHHHh---cCCccEEEEeCccc--cHHHHHHHHHhCCCceEEEcCCCCH
Q 009843 248 DLCSVLKA---NGDTCAIVYCLERT--TCDELSAYLSAGGISCAAYHAGLND 294 (524)
Q Consensus 248 ~l~~~l~~---~~~~~~IIf~~s~~--~~e~l~~~L~~~g~~~~~~h~~l~~ 294 (524)
.+.+.+.+ ..+..+|||+.... .+-++.=.|+..|..+..+.||+..
T Consensus 76 ~~~~~l~~lGI~~~~~VVvYd~~~g~~~A~R~~w~L~~~G~~v~iLdGG~~a 127 (156)
T d1okga1 76 EFIDWCMANGMAGELPVLCYDDECGAMGGCRLWWMLNSLGADAYVINGGFQA 127 (156)
T ss_dssp HHHHHHHHTTCSSSSCEEEECSSTTTTTHHHHHHHHHHHTCCEEEETTTTHH
T ss_pred HHHHHHHhccccCCceEEEEeCCCCchHHHHHHHHHHHcCCeeEEeCCCHHH
Confidence 34444444 45678999986543 4667777888889999999999753
Done!