BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 009846
         (524 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|1KS8|A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes
           Takasagoensis, At Ph 2.5.
 pdb|1KSC|A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes
           Takasagoensis, At Ph 5.6.
 pdb|1KSD|A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes
           Takasagoensis, At Ph 6.5
          Length = 433

 Score =  296 bits (758), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 171/448 (38%), Positives = 248/448 (55%), Gaps = 39/448 (8%)

Query: 55  YAEALKVAMQFFDVQKSGKL-VNNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFP 113
           Y + L+ ++ F++ Q+SG+L  + K++WR DSAL D  D G DLT G +DAGD +KFGFP
Sbjct: 5   YKQVLRDSLLFYEAQRSGRLPADQKVTWRKDSALNDQGDQGQDLTGGYFDAGDFVKFGFP 64

Query: 114 MAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGNPDKDH 173
           MA+TATVL+W ++++         L   + ++KW TDY I AH  +N    QVG  D DH
Sbjct: 65  MAYTATVLAWGLIDFEAGYSSAGALDDGRKAVKWATDYFIKAHTSQNEFYGQVGQGDADH 124

Query: 174 KCWERPESMAEERPLTQVNTSFPGXXXXXXXXXXXXXXXLVFKKSDSTYSSSLLKHAQQL 233
             W RPE M   RP  +++TS PG               +VF+  D TYS++LL HA+QL
Sbjct: 125 AFWGRPEDMTMARPAYKIDTSRPGSDLAGETAAALAAASIVFRNVDGTYSNNLLTHARQL 184

Query: 234 FNFADNHRGSYSVSIPQVQNFYNSTGYGDELLWAASWLYHATGDHSYLQYVSGKNGK-DF 292
           F+FA+N+RG YS SI   +NFY S  Y DEL+WAA+WLY AT D++YL        +   
Sbjct: 185 FDFANNYRGKYSDSITDARNFYASADYRDELVWAAAWLYRATNDNTYLNTAESLYDEFGL 244

Query: 293 ANWGSPSWFSWDNKLAGTQVLLSRLSFFSGKDISGNSGLRMYRKTAEAVMCGLLPKSPTA 352
            NWG     +WD+K++G QVLL++L           +  + Y+ T ++ +  L+      
Sbjct: 245 QNWGGG--LNWDSKVSGVQVLLAKL-----------TNKQAYKDTVQSYVNYLINNQ--- 288

Query: 353 TTSRTESGLIWVSEWNSLQHPVASAFLAAVYSDYMLTSRTAELTCDGHSFKPSDLRDFAK 412
              +T  GL+++  W +L+H   +AF+       ML +  AEL     S+     R FA+
Sbjct: 289 --QKTPKGLLYIDMWGTLRHAANAAFI-------MLEA--AELGLSASSY-----RQFAQ 332

Query: 413 DQADYILGNNPLKMSFLVGYGKKYPQYVHHRGASIPADATTGCRDGFKWLDSKKPNPNVA 472
            Q DY LG+     SF+ G+G   P   HHR +S P    T   + F   +S  PN +V 
Sbjct: 333 TQIDYALGDG--GRSFVCGFGSNPPTRPHHRSSSCPPAPATCDWNTF---NSPDPNYHVL 387

Query: 473 VGGLVGGPFLNETYIDSRNNSMQAEPST 500
            G LVGGP  N+ Y+D R++ +  E +T
Sbjct: 388 SGALVGGPDQNDNYVDDRSDYVHNEVAT 415


>pdb|1JS4|A Chain A, EndoEXOCELLULASE:CELLOBIOSE FROM THERMOMONOSPORA
 pdb|1JS4|B Chain B, EndoEXOCELLULASE:CELLOBIOSE FROM THERMOMONOSPORA
 pdb|4TF4|A Chain A, EndoEXOCELLULASE:CELLOPENTAOSE FROM THERMOMONOSPORA
 pdb|4TF4|B Chain B, EndoEXOCELLULASE:CELLOPENTAOSE FROM THERMOMONOSPORA
 pdb|3TF4|A Chain A, EndoEXOCELLULASE:CELLOTRIOSE FROM THERMOMONOSPORA
 pdb|3TF4|B Chain B, EndoEXOCELLULASE:CELLOTRIOSE FROM THERMOMONOSPORA
 pdb|1TF4|A Chain A, EndoEXOCELLULASE FROM THERMOMONOSPORA
 pdb|1TF4|B Chain B, EndoEXOCELLULASE FROM THERMOMONOSPORA
          Length = 605

 Score =  284 bits (727), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 182/461 (39%), Positives = 248/461 (53%), Gaps = 52/461 (11%)

Query: 54  KYAEALKVAMQFFDVQKSGKLV-NNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGF 112
            YAEAL+ +M F++ Q+SGKL  NN++SWRGDS L DG D+GLDLT G YDAGDH+KFGF
Sbjct: 5   NYAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADVGLDLTGGWYDAGDHVKFGF 64

Query: 113 PMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGNPDKD 172
           PMAFTAT+L+W  +E  +      Q+   +D+L+W+ DY I AHP  NVL VQVG+ D D
Sbjct: 65  PMAFTATMLAWGAIESPEGYIRSGQMPYLKDNLRWVNDYFIKAHPSPNVLYVQVGDGDAD 124

Query: 173 HKCWERPESMAEERPLTQVNTSFPGXXXXXXXXXXXXXXXLVFKKSDSTYSSSLLKHAQQ 232
           HK W   E M  ERP  +V+ S PG               +VF   D  Y+++L++HA+Q
Sbjct: 125 HKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAMAASSIVFADDDPAYAATLVQHAKQ 184

Query: 233 LFNFADNHRGSYSVSIPQVQNFYNS-TGYGDELLWAASWLYHATGDHSYL-------QYV 284
           L+ FAD +RG YS  +P    FYNS +GY DEL+W A WLY ATGD SYL        ++
Sbjct: 185 LYTFADTYRGVYSDCVP-AGAFYNSWSGYQDELVWGAYWLYKATGDDSYLAKAEYEYDFL 243

Query: 285 SGKNGKDFANWGSPSW-FSWDNKLAGTQVLLSRLSFFSGKDISGNSGLRMYRKTAEAVMC 343
           S +   D  ++    W  +WD+K  GT VLL++    +GK    +   R        V  
Sbjct: 244 STEQQTDLRSY---RWTIAWDDKSYGTYVLLAKE---TGKQKYIDDANRWLDYWTVGVNG 297

Query: 344 GLLPKSPTATTSRTESGLIWVSEWNSLQHPVASAFLAAVYSDYMLTSRTAELTCDGHSFK 403
             +P SP         G+  +  W +L++   +AF+A VY         A++  D    +
Sbjct: 298 QRVPYSP--------GGMAVLDTWGALRYAANTAFVALVY---------AKVIDD--PVR 338

Query: 404 PSDLRDFAKDQADYILGNNPLKMSFLVGYGKKYPQYVHHRGASIPADATTGCRDGFKWLD 463
                DFA  Q +Y LG+NP   S++VG+G   P+  HHR A               W D
Sbjct: 339 KQRYHDFAVRQINYALGDNPRNSSYVVGFGNNPPRNPHHRTAH------------GSWTD 386

Query: 464 ---SKKPNPNVAVGGLVGGP-FLNETYIDSRNNSMQAEPST 500
              S   N +V  G LVGGP   N+ Y D R + +  E +T
Sbjct: 387 SIASPAENRHVLYGALVGGPGSPNDAYTDDRQDYVANEVAT 427


>pdb|2XFG|A Chain A, Reassembly And Co-Crystallization Of A Family 9 Processive
           Endoglucanase From Separately Expressed Gh9 And Cbm3c
           Modules
          Length = 466

 Score =  256 bits (655), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 168/468 (35%), Positives = 233/468 (49%), Gaps = 56/468 (11%)

Query: 55  YAEALKVAMQFFDVQKSGKLVNN--KISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGF 112
           Y EAL+ A+ F++ Q+SGKL ++  +++WRGDS L DG+D G+DLT G YDAGDH+KF  
Sbjct: 26  YGEALQKAIFFYECQRSGKLDSSTLRLNWRGDSGLDDGKDAGIDLTGGWYDAGDHVKFNL 85

Query: 113 PMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGNPDKD 172
           PM+++A +L WA+ EY D      Q     +++KW  DY I  HP+++V   QVG+   D
Sbjct: 86  PMSYSAAMLGWAVYEYEDAFKQSGQYNHILNNIKWACDYFIKCHPEKDVYYYQVGDGHAD 145

Query: 173 HKCWERPESMAEERPLTQVNTSFPGXXXXXXXXXXXXXXXLVFKKSDSTYSSSLLKHAQQ 232
           H  W   E M  ERP  +V+ S PG               ++FKK D  YS   LKHA++
Sbjct: 146 HAWWGPAEVMPMERPSYKVDRSSPGSTVVAETSAALAIASIIFKKVDGEYSKECLKHAKE 205

Query: 233 LFNFADNHRGSYSVSIPQVQNFYNS-TGYGDELLWAASWLYHATGDHSYLQYVSGKNGKD 291
           LF FAD  +     +      FYNS +G+ DEL WAA WLY AT D SYL      + K 
Sbjct: 206 LFEFADTTKSDDGYTA--ANGFYNSWSGFYDELSWAAVWLYLATNDSSYLDKAESYSDK- 262

Query: 292 FANWGSP--------SWF-SWDNKLAGTQVLLSRLSFFSGKDISGNSGLRMYRKTAEAVM 342
              WG           W   WD+   GT +LL+R+   +GK          Y++  E  +
Sbjct: 263 ---WGYEPQTNIPKYKWAQCWDDVTYGTYLLLARIKNDNGK----------YKEAIERHL 309

Query: 343 CGLLPKSPTATTSRTESGLIWVSEWNSLQHPVASAFLAAVYSDYMLTSRTAELTCDGHSF 402
                       + T  GL W+ +W SL++   +AFLA VYSD+           +G   
Sbjct: 310 DWWTTGYNGERITYTPKGLAWLDQWGSLRYATTTAFLACVYSDWE----------NGDKE 359

Query: 403 KPSDLRDFAKDQADYILGNNPLKMSFLVGYGKKYPQYVHHRGASIPADATTGCRDGFKWL 462
           K     +FA+ QADY LG+     SF+VG+G+  P+  HHR A               W 
Sbjct: 360 KAKTYLEFARSQADYALGST--GRSFVVGFGENPPKRPHHRTAH------------GSWA 405

Query: 463 DSKKPNP---NVAVGGLVGGPFLNETYIDSRNNSMQAEPST-YNGAVI 506
           DS+   P   +V  G LVGGP   + Y D  +N    E +  YN   +
Sbjct: 406 DSQMEPPEHRHVLYGALVGGPDSTDNYTDDISNYTCNEVACDYNAGFV 453


>pdb|4DOD|A Chain A, The Structure Of Cbescii Cela Gh9 Module
 pdb|4DOE|A Chain A, The Liganded Structure Of Cbescii Cela Gh9 Module
          Length = 475

 Score =  244 bits (622), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 163/468 (34%), Positives = 234/468 (50%), Gaps = 58/468 (12%)

Query: 55  YAEALKVAMQFFDVQKSGKLVN-NKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFP 113
           Y EAL+ A+ F++ Q SGKL N  + +WRGDSALKDG+D GLDLT G +DAGDH+KF  P
Sbjct: 28  YGEALQKAIMFYEFQMSGKLPNWVRNNWRGDSALKDGQDNGLDLTGGWFDAGDHVKFNLP 87

Query: 114 MAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGNPDKDH 173
           M++T T+LSWA+ EY D      QL+   + ++W+ DY +  HP + V   QVG+  KDH
Sbjct: 88  MSYTGTMLSWAVYEYKDAFVKSGQLEHILNQIEWVNDYFVKCHPSKYVYYYQVGDGSKDH 147

Query: 174 KCWERPESMAEERPLTQVNTSFPGXXXXXXXXXXXXXXXLVFKKSDSTYSSSLLKHAQQL 233
             W   E M  ERP  +V  S PG               +V K  + T +++ L+HA++L
Sbjct: 148 AWWGPAEVMQMERPSFKVTQSSPGSTVVAETAASLAAASIVLKDRNPTKAATYLQHAKEL 207

Query: 234 FNFADNHRGSYSVSIPQVQNFYNS-TGYGDELLWAASWLYHATGDHSYLQ---------- 282
           + FA+  +            +YNS +G+ DEL WAA WLY AT D +YL           
Sbjct: 208 YEFAEVTKS--DAGYTAANGYYNSWSGFYDELSWAAVWLYLATNDSTYLTKAESYVQNWP 265

Query: 283 YVSGKNGKDFANWGSPSWFSWDNKLAGTQVLLSRLSFFSGKDISGNSGLRMYRKTAEAVM 342
            +SG N  D+  W       WD+   G  +LL+++   +GKDI        Y++  E+ +
Sbjct: 266 KISGSNTIDY-KWAH----CWDDVHNGAALLLAKI---TGKDI--------YKQIIESHL 309

Query: 343 CGLLPKSPTATTSRTESGLIWVSEWNSLQHPVASAFLAAVYSDYMLTSRTAELTCDGHSF 402
                         T  GL W+ +W SL++   +AFLA VYSD++    T          
Sbjct: 310 DYWTTGYNGERIKYTPKGLAWLDQWGSLRYATTTAFLAFVYSDWVGCPST---------- 359

Query: 403 KPSDLRDFAKDQADYILGNNPLKMSFLVGYGKKYPQYVHHRGASIPADATTGCRDGFKWL 462
           K    R F + Q DY LG+     SF+VG+G   P+  HHR A               W 
Sbjct: 360 KKEIYRKFGESQIDYALGS--AGRSFVVGFGTNPPKRPHHRTAHS------------SWA 405

Query: 463 DSKKP---NPNVAVGGLVGGPFLNETYIDSRNNSMQAEPST-YNGAVI 506
           DS+     + +   G LVGGP  +++Y D  +N +  E +  YN   +
Sbjct: 406 DSQSIPSYHRHTLYGALVGGPGSDDSYTDDISNYVNNEVACDYNAGFV 453


>pdb|1GA2|A Chain A, The Crystal Structure Of Endoglucanase 9g From Clostridium
           Cellulolyticum Complexed With Cellobiose
 pdb|1GA2|B Chain B, The Crystal Structure Of Endoglucanase 9g From Clostridium
           Cellulolyticum Complexed With Cellobiose
 pdb|1G87|A Chain A, The Crystal Structure Of Endoglucanase 9g From Clostridium
           Cellulolyticum
 pdb|1G87|B Chain B, The Crystal Structure Of Endoglucanase 9g From Clostridium
           Cellulolyticum
 pdb|1KFG|A Chain A, The X-Ray Crystal Structure Of Cel9g From Clostridium
           Cellulolyticum Complexed With A Thio-Oligosaccharide
           Inhibitor
 pdb|1KFG|B Chain B, The X-Ray Crystal Structure Of Cel9g From Clostridium
           Cellulolyticum Complexed With A Thio-Oligosaccharide
           Inhibitor
          Length = 614

 Score =  226 bits (577), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 154/456 (33%), Positives = 217/456 (47%), Gaps = 54/456 (11%)

Query: 55  YAEALKVAMQFFDVQKSGKL-VNNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFP 113
           Y EAL+ ++ F++ Q+SG L  + + +WR DS +KDG D+G+DLT G YDAGDH+KF  P
Sbjct: 6   YGEALQKSIMFYEFQRSGDLPADKRDNWRDDSGMKDGSDVGVDLTGGWYDAGDHVKFNLP 65

Query: 114 MAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGNPDKDH 173
           M++T+ +L+W++ E  D  D   Q +   D +KW  DY I  +P   V   QVG+  KDH
Sbjct: 66  MSYTSAMLAWSLYEDKDAYDKSGQTKYIMDGIKWANDYFIKCNPTPGVYYYQVGDGGKDH 125

Query: 174 KCWERPESMAEERPLTQVNTSFPGXXXXXXXXXXXXXXXLVFKKSDSTYSSSLLKHAQQL 233
             W   E M  ERP  +V+ S PG               +VFK SD TY+   + HA+ L
Sbjct: 126 SWWGPAEVMQMERPSFKVDASKPGSAVCASTAASLASAAVVFKSSDPTYAEKCISHAKNL 185

Query: 234 FNFADNHRGSYSVSIPQVQNFYNSTGYGDELLWAASWLYHATGDHSYLQYVSGKNGKDFA 293
           F+ AD  +     +        +S    D+L WAA WLY AT D +YL     K      
Sbjct: 186 FDMADKAKSDAGYTAASGYYSSSSF--YDDLSWAAVWLYLATNDSTYLD----KAESYVP 239

Query: 294 NWGSPS--------WF-SWDNKLAGTQVLLSRLSFFSGKDISGNSGLRMYRKTAEAVMCG 344
           NWG           W   WD+   G ++LL++L           +  ++Y+ + E  +  
Sbjct: 240 NWGKEQQTDIIAYKWGQCWDDVHYGAELLLAKL-----------TNKQLYKDSIEMNLDF 288

Query: 345 LLPKSPTATTSRTESGLIWVSEWNSLQHPVASAFLAAVYSDYMLTSRTAELTCDGHSFKP 404
                     S T  GL W+ +W SL+H    AFLA VY+++   + +          K 
Sbjct: 289 WTTGVNGTRVSYTPKGLAWLFQWGSLRHATTQAFLAGVYAEWEGCTPS----------KV 338

Query: 405 SDLRDFAKDQADYILGNNPLKMSFLVGYGKKYPQYVHHRGASIPADATTGCRDGFKWLD- 463
           S  +DF K Q DY LG+     SF+VGYG   PQ+ HHR A               W D 
Sbjct: 339 SVYKDFLKSQIDYALGST--GRSFVVGYGVNPPQHPHHRTAH------------GSWTDQ 384

Query: 464 --SKKPNPNVAVGGLVGGPFLNETYIDSRNNSMQAE 497
             S   + +   G LVGGP   + Y D  NN +  E
Sbjct: 385 MTSPTYHRHTIYGALVGGPDNADGYTDEINNYVNNE 420


>pdb|1K72|A Chain A, The X-ray Crystal Structure Of Cel9g Complexed With
           Cellotriose
 pdb|1K72|B Chain B, The X-ray Crystal Structure Of Cel9g Complexed With
           Cellotriose
          Length = 614

 Score =  226 bits (577), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 154/456 (33%), Positives = 217/456 (47%), Gaps = 54/456 (11%)

Query: 55  YAEALKVAMQFFDVQKSGKL-VNNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFP 113
           Y EAL+ ++ F++ Q+SG L  + + +WR DS +KDG D+G+DLT G YDAGDH+KF  P
Sbjct: 6   YGEALQKSIMFYEFQRSGDLPADKRDNWRDDSGMKDGSDVGVDLTGGWYDAGDHVKFNLP 65

Query: 114 MAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGNPDKDH 173
           M++T+ +L+W++ E  D  D   Q +   D +KW  DY I  +P   V   QVG+  KDH
Sbjct: 66  MSYTSAMLAWSLYEDKDAYDKSGQTKYIMDGIKWANDYFIKCNPTPGVYYYQVGDGGKDH 125

Query: 174 KCWERPESMAEERPLTQVNTSFPGXXXXXXXXXXXXXXXLVFKKSDSTYSSSLLKHAQQL 233
             W   E M  ERP  +V+ S PG               +VFK SD TY+   + HA+ L
Sbjct: 126 SWWGPAEVMQMERPSFKVDASKPGSAVCASTAASLASAAVVFKSSDPTYAEKCISHAKNL 185

Query: 234 FNFADNHRGSYSVSIPQVQNFYNSTGYGDELLWAASWLYHATGDHSYLQYVSGKNGKDFA 293
           F+ AD  +     +        +S    D+L WAA WLY AT D +YL     K      
Sbjct: 186 FDMADKAKSDAGYTAASGYYSSSSF--YDDLSWAAVWLYLATNDSTYLD----KAESYVP 239

Query: 294 NWGSPS--------WFS-WDNKLAGTQVLLSRLSFFSGKDISGNSGLRMYRKTAEAVMCG 344
           NWG           W   WD+   G ++LL++L           +  ++Y+ + E  +  
Sbjct: 240 NWGKEQQTDIIAYKWGQXWDDVHYGAELLLAKL-----------TNKQLYKDSIEMNLDF 288

Query: 345 LLPKSPTATTSRTESGLIWVSEWNSLQHPVASAFLAAVYSDYMLTSRTAELTCDGHSFKP 404
                     S T  GL W+ +W SL+H    AFLA VY+++   + +          K 
Sbjct: 289 WTTGVNGTRVSYTPKGLAWLFQWGSLRHATTQAFLAGVYAEWEGCTPS----------KV 338

Query: 405 SDLRDFAKDQADYILGNNPLKMSFLVGYGKKYPQYVHHRGASIPADATTGCRDGFKWLD- 463
           S  +DF K Q DY LG+     SF+VGYG   PQ+ HHR A               W D 
Sbjct: 339 SVYKDFLKSQIDYALGST--GRSFVVGYGVNPPQHPHHRTAH------------GSWTDQ 384

Query: 464 --SKKPNPNVAVGGLVGGPFLNETYIDSRNNSMQAE 497
             S   + +   G LVGGP   + Y D  NN +  E
Sbjct: 385 MTSPTYHRHTIYGALVGGPDNADGYTDEINNYVNNE 420


>pdb|1IA6|A Chain A, Crystal Structure Of The Cellulase Cel9m Of C.
           Cellulolyticum
 pdb|1IA7|A Chain A, Crystal Structure Of The Cellulase Cel9m Of C.
           Cellulolyticium In Complex With Cellobiose
          Length = 441

 Score =  218 bits (554), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 140/462 (30%), Positives = 216/462 (46%), Gaps = 57/462 (12%)

Query: 55  YAEALKVAMQFFDVQKSGKLV--NNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGF 112
           Y+ ALK ++ FFD  K G     NN   WRG     DG D+G+DLT G +DAGDH+KFG 
Sbjct: 6   YSTALKDSIIFFDANKCGPQAGENNVFDWRGACHTTDGSDVGVDLTGGYHDAGDHVKFGL 65

Query: 113 PMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGNPDKD 172
           P  ++A +L W++ E+ +  D           LK+ TDY + +HP       QVG  + D
Sbjct: 66  PQGYSAAILGWSLYEFKESFDATGNTTKMLQQLKYFTDYFLKSHPNSTTFYYQVGEGNAD 125

Query: 173 HKCWERPESMAEERP-LTQVNTSFPGXXXXXXXXXXXXXXXLVFKKSDSTYSSSLLKHAQ 231
           H  W  PE    +RP L + + S P                L +K  DS Y++  L  A+
Sbjct: 126 HTYWGAPEEQTGQRPSLYKADPSSPASDILSETSAALTLMYLNYKNIDSAYATKCLNAAK 185

Query: 232 QLFNFADNHRGSYSVSIPQVQNFYNSTGYGDELLWAASWLYHATGDHSYL----QYVSGK 287
           +L+     ++G     +   Q+FY +T +GD+L WAA+WLY AT D +Y+    Q+++  
Sbjct: 186 ELYAMGKANQG-----VGNGQSFYQATSFGDDLAWAATWLYTATNDSTYITDAEQFITLG 240

Query: 288 NGKDFANWGSPSWFSWDNKLAGTQVLLSRLSFFSGKDISGNSGLRMYRKTAEAVMCGLLP 347
           N  +           WD+      + L+++           +G ++Y+   +A+      
Sbjct: 241 NTMNENKMQDKWTMCWDDMYVPAALRLAQI-----------TGKQIYK---DAIEFNFNY 286

Query: 348 KSPTATTSRTESGLIWVSEWNSLQHPVASAFLAAVYSDYMLTSRTAELTCDGHSFKPSDL 407
                TT  T  GL W+S W  L++  A + +  VY             C  +      L
Sbjct: 287 WKTQVTT--TPGGLKWLSNWGVLRYAAAESMVMLVY-------------CKQN--PDQSL 329

Query: 408 RDFAKDQADYILGNNPLKMSFLVGYGKKYPQYVHHRGASIPADATTGCRDGFKWL--DSK 465
            D AK Q DYILG+NP  MS+++GYG  +  + HHR A           +G+ +   D+ 
Sbjct: 330 LDLAKKQVDYILGDNPANMSYIIGYGSNWCIHPHHRAA-----------NGYTYANGDNA 378

Query: 466 KPNPNVAVGGLVGGPFLNETYIDSRNNSMQAEPST-YNGAVI 506
           KP  ++  G LVGGP  N+ ++D  N     E +  YN  ++
Sbjct: 379 KPAKHLLTGALVGGPDQNDKFLDDANQYQYTEVALDYNAGLV 420


>pdb|2YIK|A Chain A, Catalytic Domain Of Clostridium Thermocellum Celt
          Length = 611

 Score =  183 bits (465), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 139/499 (27%), Positives = 222/499 (44%), Gaps = 73/499 (14%)

Query: 52  EKKYAEALKVAMQFFDVQKSGKLV--NNKISWRGDSALKDGR------------------ 91
           E  YA+AL+ +M F+D    G  V  N+ +SWRGD  + D R                  
Sbjct: 37  EYNYAKALQYSMFFYDANMCGTGVDENSLLSWRGDCHVYDARLPLDSQNTNMSDGFISSN 96

Query: 92  --------DMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQD 143
                   D  +D++ G +DAGDH+KFG P A+ A+ + W   E+ DQ     Q   A+ 
Sbjct: 97  RSVLDPDGDGKVDVSGGFHDAGDHVKFGLPEAYAASTVGWGYYEFKDQFRATGQAVHAEV 156

Query: 144 SLKWITDYLISAHPKE---NVLIV--QVGNPDKDHKCWERPESMAEERPLTQVNTSFPGX 198
            L++  DY +    ++   NV+    QVG+ D DH  W  PE+    R    +    PG 
Sbjct: 157 ILRYFNDYFMRCTFRDASGNVVAFCHQVGDGDIDHAFWGAPENDTMFRRGWFITKEKPGT 216

Query: 199 XXXXXXXXXXXXXXLVFKKSDSTYSSSLLKHAQQLFNFADNHRGSYSVSIPQVQNFYNST 258
                         + FK +D  Y++  L +A+ LF+FA+ +           + +Y S+
Sbjct: 217 DIISATAASLAINYMNFKDTDPQYAAKSLDYAKALFDFAEKNPKGVVQGEDGPKGYYGSS 276

Query: 259 GYGDELLWAASWLYHATGDHSYLQYVSGKNGKDFANWGSPSWF-SWDNKLAGTQVLLSRL 317
            + D+  WAA+WLY AT +  YL     +  K +  +  P W   W++  +GT  +L+ +
Sbjct: 277 KWQDDYCWAAAWLYLATQNEHYLD----EAFKYYDYYAPPGWIHCWNDVWSGTACILAEI 332

Query: 318 SFFSGKDISGNSGLRMYRKTAE---------AVMCGLLPKSPTATTSRTESGLIWVSEWN 368
           +    KD S N   R  R + +           +  LL K      + T  G +++++W 
Sbjct: 333 NDLYDKD-SQNFEDRYKRASNKNQWEQIDFWKPIQDLLDKWSGGGITVTPGGYVFLNQWG 391

Query: 369 SLQHPVASAFLAAVYSDYMLTSRTAELTCDGHSFKPSDLRDFAKDQADYILGNNPLKMSF 428
           S ++  A+  +A VY  +             H   PS   ++A+ Q DY+LG NPL   +
Sbjct: 392 SARYNTAAQLIALVYDKH-------------HGDTPSKYANWARSQMDYLLGKNPLNRCY 438

Query: 429 LVGYGKKYPQYVHHRGASIPADATTGCRDGFKWLDSKKPNPNVAVGGLVGGPFLNETYID 488
           +VGY     +Y HHR AS           G K  +   P+  V  G LVGGP  ++ ++D
Sbjct: 439 VVGYSSNSVKYPHHRAAS-----------GLKDANDSSPHKYVLYGALVGGPDASDQHVD 487

Query: 489 SRNNSMQAEPST-YNGAVI 506
             N+ +  E +  YN A +
Sbjct: 488 RTNDYIYNEVAIDYNAAFV 506


>pdb|3EZ8|A Chain A, Crystal Structure Of Endoglucanase Cel9a From The
           Thermoacidophilic Alicyclobacillus Acidocaldarius
 pdb|3GZK|A Chain A, Structure Of A. Acidocaldarius Cellulase Cela
 pdb|3H2W|A Chain A, Structure Of A. Acidocaldarius Cellulase Cela In Complex
           With Cellobiose
 pdb|3H3K|A Chain A, Structure Of A. Acidocaldarius Cellulase Cela In Complex
           With Cellotetraose
 pdb|3RX5|A Chain A, Structure Of Aacel9a In Complex With Cellotriose-Like
           Isofagomine
 pdb|3RX7|A Chain A, Structure Of Aacel9a In Complex With Cellotetraose-Like
           Isofagomine
 pdb|3RX8|A Chain A, Structure Of Aacel9a In Complex With Cellobiose-Like
           Isofagomine
          Length = 537

 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 111/494 (22%), Positives = 174/494 (35%), Gaps = 103/494 (20%)

Query: 52  EKKYAEALKVAMQFFDVQKSGKLV--NNKISW-RGDSALKD----GRDMGLDLTKGMYDA 104
            + Y + L+  ++FFD Q  G ++  +    W  G     D    G +  L    G +DA
Sbjct: 85  RRAYRDVLEAMLRFFDYQLCGVVLPEDEAGPWAHGACHTSDAKVFGTERALACPGGWHDA 144

Query: 105 GDHMKFGFPMAFTATVLSWA------ILEYGDQMDVVDQ-------LQPAQDSLKWITDY 151
           GD+ K+  P A     L  A       L +   M  V +       L+ A++ + W+   
Sbjct: 145 GDYGKYTVPAAKAVADLLLAHEYFPAALAHVRPMRSVHRAPHLPPALEVAREEIAWL--- 201

Query: 152 LISAHPKENVLIVQVGNPDKDHKCWERPESMAEERPLTQVNTSFPGXXXXXXXXXXXXXX 211
           L    P    +  +V  P        RPE   ++ PL     S+                
Sbjct: 202 LTMQDPATGGVYHKVTTPSFP-PLDTRPED--DDAPLVLSPISY---AATATFCAAMAHA 255

Query: 212 XLVFKKSDSTYSSSLLKHAQQLFNFADNHRGSYSVSIPQVQNFYNSTG-----YGD---- 262
            LV++  D   SS     A++ + +   H         ++Q F+N  G     YGD    
Sbjct: 256 ALVYRPFDPALSSCCADAARRAYAWLGAH---------EMQPFHNPDGILTGEYGDAELR 306

Query: 263 -ELLWAASWLYHATGDHSYLQYVSGKNGKDFANWGSPSWFSW-DNKLAGTQVLLSRLSFF 320
            ELLWA+  L   TGD ++ +        D      P    W D  L G    L      
Sbjct: 307 DELLWASCALLRMTGDSAWARVCEPLLDLDL-----PWELGWADVALYGVMDYLRTPRAA 361

Query: 321 SGKDISGNSGLRMYRKTAEAVMCGLLPKSPTATTSRTESGLIWVSEWNSLQHPVASAFLA 380
              D+      R+ R+     +  +    P     R +   IW S    L   +A     
Sbjct: 362 VSDDVRNKVKSRLLRELD--ALAAMAESHPFGIPMRDDD-FIWGSNMVLLNRAMA----- 413

Query: 381 AVYSDYMLTSRTAELTCDGHSFKPSDLRDFAKDQADYILGNNPLKMSFLVGYGKKYPQYV 440
                ++L      L    H+         A+  ADY+ G NPL   ++ G+G++  ++ 
Sbjct: 414 -----FLLAEGVGVLHPAAHTV--------AQRAADYLFGANPLGQCYVTGFGQRPVRHP 460

Query: 441 HHRGASIPADATTGCRDGFKWLDSKKPNPNVAVGG-------------LVGGPFLNETYI 487
           HHR +   AD            D   P P + VGG             L G P + E YI
Sbjct: 461 HHRPSV--AD------------DVDHPVPGMVVGGPNRHLQDEIARAQLAGRPAM-EAYI 505

Query: 488 DSRNNSMQAEPSTY 501
           D +++    E + Y
Sbjct: 506 DHQDSYSTNEVAVY 519


>pdb|1RQ5|A Chain A, Structural Basis For The Exocellulase Activity Of The
           Cellobiohydrolase Cbha From C. Thermocellum
          Length = 610

 Score = 40.8 bits (94), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 83/396 (20%), Positives = 133/396 (33%), Gaps = 80/396 (20%)

Query: 96  DLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDV--VDQLQPAQD---------- 143
           D+T G YDAGDH K+         +  W ++   ++  +  +D   P +D          
Sbjct: 169 DVTGGWYDAGDHGKY----VVNGGIAVWTLMNMYERAKIRGLDNWGPYRDGGMNIPEQNN 224

Query: 144 -------SLKWITDYL--ISAHPKENVLIVQVGNPDKDHKCWER----PESMAEERPLTQ 190
                    +W  ++   +    KE+  I  + +       W      P    + R L  
Sbjct: 225 GYPDILDEARWEIEFFKKMQVTEKEDPSIAGMVHHKIHDFRWTALGMLPHEDPQPRYLRP 284

Query: 191 VNTSFPGXXXXXXXXXXXXXXXLVFKKSDSTYSSSLLKHAQQLFNFADNHRGSYS----V 246
           V+T+                   ++K  D T+++  L+ A+  +  A  H   Y+     
Sbjct: 285 VSTA-----ATLNFAATLAQSARLWKDYDPTFAADCLEKAEIAWQAALKHPDIYAEYTPG 339

Query: 247 SIPQVQNFYNSTGYGDELLWAASWLYHATGDHSYLQYV----------------SGKNGK 290
           S       YN    GDE  WAA  LY  TG   Y  Y+                 G NG+
Sbjct: 340 SGGPGGGPYNDDYVGDEFYWAACELYVTTGKDEYKNYLMNSPHYLEMPAKMGENGGANGE 399

Query: 291 DFANWGSPSWFSWDNKLAGTQVLLSRLSFFSGKDISGNSGLRMYRKTAEAVMCGLLPKS- 349
           D   WG  +W +   +  GT  L    +     DI          K A+  +  +  +  
Sbjct: 400 DNGLWGCFTWGT--TQGLGTITLALVENGLPATDIQ--KARNNIAKAADRWLENIEEQGY 455

Query: 350 --PTATTSRTESGLIWVSEWNSLQHPVASAFLAAVYSDYMLTSRTAELTCDGHSFKPSDL 407
             P         G  W S  NS            + +  ++     + T D      S  
Sbjct: 456 RLPIKQAEDERGGYPWGS--NSF-----------ILNQMIVMGYAYDFTGD------SKY 496

Query: 408 RDFAKDQADYILGNNPLKMSFLVGYGKKYPQYVHHR 443
            D   D   Y+LG N +  S++ GYG++  Q  H R
Sbjct: 497 LDGMFDGISYLLGRNAMDQSYVTGYGERPLQNPHDR 532


>pdb|1UT9|A Chain A, Structural Basis For The Exocellulase Activity Of The
           Cellobiohydrolase Cbha From C. Thermocellum
          Length = 609

 Score = 40.8 bits (94), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 83/396 (20%), Positives = 133/396 (33%), Gaps = 80/396 (20%)

Query: 96  DLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDV--VDQLQPAQD---------- 143
           D+T G YDAGDH K+         +  W ++   ++  +  +D   P +D          
Sbjct: 169 DVTGGWYDAGDHGKY----VVNGGIAVWTLMNMYERAKIRGLDNWGPYRDGGMNIPEQNN 224

Query: 144 -------SLKWITDYL--ISAHPKENVLIVQVGNPDKDHKCWER----PESMAEERPLTQ 190
                    +W  ++   +    KE+  I  + +       W      P    + R L  
Sbjct: 225 GYPDILDEARWEIEFFKKMQVTEKEDPSIAGMVHHKIHDFRWTALGMLPHEDPQPRYLRP 284

Query: 191 VNTSFPGXXXXXXXXXXXXXXXLVFKKSDSTYSSSLLKHAQQLFNFADNHRGSYS----V 246
           V+T+                   ++K  D T+++  L+ A+  +  A  H   Y+     
Sbjct: 285 VSTA-----ATLNFAATLAQSARLWKDYDPTFAADCLEKAEIAWQAALKHPDIYAEYTPG 339

Query: 247 SIPQVQNFYNSTGYGDELLWAASWLYHATGDHSYLQYV----------------SGKNGK 290
           S       YN    GDE  WAA  LY  TG   Y  Y+                 G NG+
Sbjct: 340 SGGPGGGPYNDDYVGDEFYWAACELYVTTGKDEYKNYLMNSPHYLEMPAKMGENGGANGE 399

Query: 291 DFANWGSPSWFSWDNKLAGTQVLLSRLSFFSGKDISGNSGLRMYRKTAEAVMCGLLPKS- 349
           D   WG  +W +   +  GT  L    +     DI          K A+  +  +  +  
Sbjct: 400 DNGLWGCFTWGT--TQGLGTITLALVENGLPATDIQ--KARNNIAKAADRWLENIEEQGY 455

Query: 350 --PTATTSRTESGLIWVSEWNSLQHPVASAFLAAVYSDYMLTSRTAELTCDGHSFKPSDL 407
             P         G  W S  NS            + +  ++     + T D      S  
Sbjct: 456 RLPIKQAEDERGGYPWGS--NSF-----------ILNQMIVMGYAYDFTGD------SKY 496

Query: 408 RDFAKDQADYILGNNPLKMSFLVGYGKKYPQYVHHR 443
            D   D   Y+LG N +  S++ GYG++  Q  H R
Sbjct: 497 LDGMFDGISYLLGRNAMDQSYVTGYGERPLQNPHDR 532


>pdb|1CLC|A Chain A, Three-Dimensional Structure Of Endoglucanase D At 1.9
           Angstroms Resolution
          Length = 639

 Score = 40.4 bits (93), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/263 (21%), Positives = 100/263 (38%), Gaps = 53/263 (20%)

Query: 89  DGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQ------ 142
           +G+    D TKG +DAGD+ K+      T   +  A   + DQ++ V    P +      
Sbjct: 174 NGQHTKKDSTKGWHDAGDYNKYVVNAGITVGSMFLAWEHFKDQLEPVALEIPEKNNSIPD 233

Query: 143 --DSLKWITDYLISAHPKENVLIVQVGNPDKDHKCWERPESMAEER---PLTQVNTSFPG 197
             D LK+  D++++    +    V      ++   +  PE+  +ER   P +   T+   
Sbjct: 234 FLDELKYEIDWILTMQYPDGSGRVAHKVSTRNFGGFIMPENEHDERFFVPWSSAATA--- 290

Query: 198 XXXXXXXXXXXXXXXLVFKKSDSTYSSSLLKHAQQLFNFADNHRGSYSVSIPQVQNFYNS 257
                           +F+  D  Y+   +  A+  + F  N+  +          F N 
Sbjct: 291 -----DFVAMTAMAARIFRPYDPQYAEKCINAAKVSYEFLKNNPANV---------FANQ 336

Query: 258 TGY----------GDELLWAASWLYHATGDHSYLQYVSGKNGKDFANWGS------PSWF 301
           +G+           D+ LWAA+ ++   GD  YL        +DF N  +       + F
Sbjct: 337 SGFSTGEYATVSDADDRLWAAAEMWETLGDEEYL--------RDFENRAAQFSKKIEADF 388

Query: 302 SWDNKLAGTQVLLSRLSFFSGKD 324
            WDN +A   +    LS   GK+
Sbjct: 389 DWDN-VANLGMFTYLLSERPGKN 410


>pdb|3H7L|A Chain A, Crystal Structure Of Endoglucanase-Related Protein From
           Vibrio Parahaemolyticus
 pdb|3H7L|B Chain B, Crystal Structure Of Endoglucanase-Related Protein From
           Vibrio Parahaemolyticus
 pdb|3H7L|C Chain C, Crystal Structure Of Endoglucanase-Related Protein From
           Vibrio Parahaemolyticus
          Length = 586

 Score = 33.1 bits (74), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 15/38 (39%), Positives = 22/38 (57%)

Query: 407 LRDFAKDQADYILGNNPLKMSFLVGYGKKYPQYVHHRG 444
           L  FA+D  ++I+G NP  M  L G+G+  P Y+   G
Sbjct: 470 LSVFAQDALNWIVGLNPYDMCMLDGHGRNNPDYLPQYG 507


>pdb|1UKS|A Chain A, Crystal Structure Of F183lF259L MUTANT CYCLODEXTRIN
           Glucanotransferase Complexed With A Pseudo-Maltotetraose
           Derived From Acarbose
 pdb|1UKS|B Chain B, Crystal Structure Of F183lF259L MUTANT CYCLODEXTRIN
           Glucanotransferase Complexed With A Pseudo-Maltotetraose
           Derived From Acarbose
          Length = 686

 Score = 30.8 bits (68), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)

Query: 84  DSALKDGRDMGLDL-TKGM-YDAGDHMKFGFPMAFTATVLSW-AILEYGDQMDVVDQLQP 140
           D  LKD   M LDL   G+  DA  HM FG+  +F AT+ ++  +  +G+ +  V+++ P
Sbjct: 208 DVYLKDAIKMWLDLGVDGIRVDAVKHMPFGWQKSFMATINNYKPVFTFGEWLLGVNEISP 267


>pdb|1PAM|A Chain A, Cyclodextrin Glucanotransferase
 pdb|1PAM|B Chain B, Cyclodextrin Glucanotransferase
 pdb|1I75|A Chain A, Crystal Structure Of Cyclodextrin Glucanotransferase From
           Alkalophilic Bacillus Sp.#1011 Complexed With
           1-Deoxynojirimycin
 pdb|1I75|B Chain B, Crystal Structure Of Cyclodextrin Glucanotransferase From
           Alkalophilic Bacillus Sp.#1011 Complexed With
           1-Deoxynojirimycin
 pdb|1UKQ|A Chain A, Crystal Structure Of Cyclodextrin Glucanotransferase
           Complexed With A Pseudo-Maltotetraose Derived From
           Acarbose
 pdb|1UKQ|B Chain B, Crystal Structure Of Cyclodextrin Glucanotransferase
           Complexed With A Pseudo-Maltotetraose Derived From
           Acarbose
          Length = 686

 Score = 30.0 bits (66), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%)

Query: 84  DSALKDGRDMGLDL-TKGM-YDAGDHMKFGFPMAFTATVLSW-AILEYGDQMDVVDQLQP 140
           D  LKD   M LDL   G+  DA  HM FG+  +F AT+ ++  +  +G+    V+++ P
Sbjct: 208 DVYLKDAIKMWLDLGVDGIRVDAVKHMPFGWQKSFMATINNYKPVFTFGEWFLGVNEISP 267


>pdb|1V3J|A Chain A, Crystal Structure Of F283l Mutant Cyclodextrin
           Glycosyltransferase
 pdb|1V3J|B Chain B, Crystal Structure Of F283l Mutant Cyclodextrin
           Glycosyltransferase
 pdb|1V3L|A Chain A, Crystal Structure Of F283l Mutant Cyclodextrin
           Glycosyltransferase Complexed With A Pseudo-tetraose
           Derived From Acarbose
 pdb|1V3L|B Chain B, Crystal Structure Of F283l Mutant Cyclodextrin
           Glycosyltransferase Complexed With A Pseudo-tetraose
           Derived From Acarbose
          Length = 686

 Score = 30.0 bits (66), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%)

Query: 84  DSALKDGRDMGLDL-TKGM-YDAGDHMKFGFPMAFTATVLSW-AILEYGDQMDVVDQLQP 140
           D  LKD   M LDL   G+  DA  HM FG+  +F AT+ ++  +  +G+    V+++ P
Sbjct: 208 DVYLKDAIKMWLDLGVDGIRVDAVKHMPFGWQKSFMATINNYKPVFTFGEWFLGVNEISP 267


>pdb|1V3K|A Chain A, Crystal Structure Of F283y Mutant Cyclodextrin
           Glycosyltransferase
 pdb|1V3K|B Chain B, Crystal Structure Of F283y Mutant Cyclodextrin
           Glycosyltransferase
 pdb|1V3M|A Chain A, Crystal Structure Of F283y Mutant Cyclodextrin
           Glycosyltransferase Complexed With A Pseudo-Tetraose
           Derived From Acarbose
 pdb|1V3M|B Chain B, Crystal Structure Of F283y Mutant Cyclodextrin
           Glycosyltransferase Complexed With A Pseudo-Tetraose
           Derived From Acarbose
          Length = 686

 Score = 30.0 bits (66), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%)

Query: 84  DSALKDGRDMGLDL-TKGM-YDAGDHMKFGFPMAFTATVLSW-AILEYGDQMDVVDQLQP 140
           D  LKD   M LDL   G+  DA  HM FG+  +F AT+ ++  +  +G+    V+++ P
Sbjct: 208 DVYLKDAIKMWLDLGVDGIRVDAVKHMPFGWQKSFMATINNYKPVFTFGEWFLGVNEISP 267


>pdb|1UKT|A Chain A, Crystal Structure Of Y100l Mutant Cyclodextrin
           Glucanotransferase Compexed With An Acarbose
 pdb|1UKT|B Chain B, Crystal Structure Of Y100l Mutant Cyclodextrin
           Glucanotransferase Compexed With An Acarbose
          Length = 686

 Score = 30.0 bits (66), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%)

Query: 84  DSALKDGRDMGLDL-TKGM-YDAGDHMKFGFPMAFTATVLSW-AILEYGDQMDVVDQLQP 140
           D  LKD   M LDL   G+  DA  HM FG+  +F AT+ ++  +  +G+    V+++ P
Sbjct: 208 DVYLKDAIKMWLDLGVDGIRVDAVKHMPFGWQKSFMATINNYKPVFTFGEWFLGVNEISP 267


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.316    0.132    0.409 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,784,444
Number of Sequences: 62578
Number of extensions: 680399
Number of successful extensions: 1434
Number of sequences better than 100.0: 20
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1361
Number of HSP's gapped (non-prelim): 28
length of query: 524
length of database: 14,973,337
effective HSP length: 103
effective length of query: 421
effective length of database: 8,527,803
effective search space: 3590205063
effective search space used: 3590205063
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (25.4 bits)