BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009850
(524 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P19737|Y425_SYNP2 TPR repeat-containing protein SYNPCC7002_A0425 OS=Synechococcus sp.
(strain ATCC 27264 / PCC 7002 / PR-6)
GN=SYNPCC7002_A0425 PE=4 SV=2
Length = 387
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 169 VSVEQEATRLLGNLGWALMQQNNYIEAEDAYRRALSIAPDNNKMCN-LGICLMKQG 223
+++E R+ G LG+AL Q NY EA AYRRA + DN + N LG L + G
Sbjct: 90 LTLEANNARIHGALGYALSQLGNYSEAVTAYRRATELEDDNAEFFNALGFNLAQSG 145
>sp|Q9WX71|BCSC4_GLUXY Cellulose synthase 2 operon protein C OS=Gluconacetobacter xylinus
GN=bcsCII PE=3 SV=1
Length = 1307
Score = 40.0 bits (92), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 178 LLGNLGWALMQQNNYIEAEDAYRRALSIAPDNNKMCNL-GICLMKQGRIGEAKETLRRVK 236
LL + G+ + Q+N +A + +RALSI PDNN+ L G M +G +A TL R++
Sbjct: 99 LLLDQGYYWLGQHNLGKAHETIQRALSIEPDNNEALFLQGRLQMAEGGTTQATRTLERLE 158
Query: 237 PAVADGPRGVDSHLKA 252
A P G+ + LKA
Sbjct: 159 RQGA--PAGLVAQLKA 172
>sp|P42810|Y4667_PSEAE TPR repeat-containing protein PA4667 OS=Pseudomonas aeruginosa
(strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GN=PA4667 PE=4 SV=2
Length = 590
Score = 39.3 bits (90), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%)
Query: 178 LLGNLGWALMQQNNYIEAEDAYRRALSIAPDNNKMCNLGICLMKQGRIGEAKETLR 233
+L ++GW +Q +AE R+AL PD+ +LG L QGR G+A+ R
Sbjct: 510 ILDSMGWINYRQGKLADAERYLRQALQRYPDHEVAAHLGEVLWAQGRQGDARAIWR 565
>sp|Q8N394|TMTC2_HUMAN Transmembrane and TPR repeat-containing protein 2 OS=Homo sapiens
GN=TMTC2 PE=2 SV=1
Length = 836
Score = 37.7 bits (86), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 49/112 (43%), Gaps = 19/112 (16%)
Query: 180 GNLGWALMQQNNYIEAEDAYRRALSIAPDNNKMC-NLGICLMKQGRIGEAKETLRRVKPA 238
GNLG L Q+ EAE AYR AL + M NLG+ L + R EA L K A
Sbjct: 497 GNLGNVLKSQSKISEAESAYRNALYYRSNMADMLYNLGLLLQENSRFAEA---LHYYKLA 553
Query: 239 VADGPRGVDSHLKAYERAQQMLKDLESEMMNKGGDRVEQSRLFDAFLGSSSI 290
+ P ++L + +MN+G R E++R FL S I
Sbjct: 554 IGSRPTLASAYL-----------NTGIILMNQG--RTEEAR--RTFLKCSEI 590
Score = 35.8 bits (81), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 178 LLGNLGWALMQQNNYIEAEDAYRRALSIAPD-NNKMCNLGICLMKQGRIGEAKETLRRV 235
+L NLG L + + + EA Y+ A+ P + N GI LM QGR EA+ T +
Sbjct: 529 MLYNLGLLLQENSRFAEALHYYKLAIGSRPTLASAYLNTGIILMNQGRTEEARRTFLKC 587
>sp|Q6DCD5|TMTC2_XENLA Transmembrane and TPR repeat-containing protein 2 OS=Xenopus laevis
GN=tmtc2 PE=2 SV=1
Length = 836
Score = 37.0 bits (84), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 73/176 (41%), Gaps = 24/176 (13%)
Query: 121 ILLDLYKRCGRLDDQIALLKHKLYLIQQGL-AFNGKRTKTARSQGKK----FQVSVEQEA 175
+L+ + R + Q +LK+ L+ L F G +T K ++ ++
Sbjct: 433 LLVTVGARALYIKAQKNILKNLLFYATAALIVFYGLKTVVRNGDWKNEEMLYRSGIKVNP 492
Query: 176 TRLLGNLGWALMQQNNYIEAEDAYRRALSIAPDNNKMC-NLGICLMKQGRIGEAKETLRR 234
+ GNLG L Q+ EAE+AYR AL + M NLG+ L + + EA L
Sbjct: 493 AKAWGNLGNVLKSQSKIDEAENAYRNALYYRSNMADMLYNLGLLLQENSKFSEA---LHY 549
Query: 235 VKPAVADGPRGVDSHLKAYERAQQMLKDLESEMMNKGGDRVEQSRLFDAFLGSSSI 290
K A+ P +L + +MN+G R E++R FL S I
Sbjct: 550 YKLAIGSRPTLASGYL-----------NTGIILMNQG--RTEEAR--RTFLKCSEI 590
>sp|Q56A06|TMTC2_MOUSE Transmembrane and TPR repeat-containing protein 2 OS=Mus musculus
GN=Tmtc2 PE=2 SV=1
Length = 836
Score = 36.6 bits (83), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 180 GNLGWALMQQNNYIEAEDAYRRALSIAPDNNKMC-NLGICLMKQGRIGEAKETLRRVKPA 238
GNLG L Q+ EAE AYR AL + M NLG+ L + R EA L K A
Sbjct: 497 GNLGNVLKSQSKISEAESAYRNALFYRSNMADMLYNLGLLLQENSRFAEA---LHYYKLA 553
Query: 239 VADGPRGVDSHL 250
+ P ++L
Sbjct: 554 IGSRPTLASAYL 565
Score = 33.9 bits (76), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 178 LLGNLGWALMQQNNYIEAEDAYRRALSIAPD-NNKMCNLGICLMKQGRIGEAKETLRRV 235
+L NLG L + + + EA Y+ A+ P + N GI LM QG+ EA+ T +
Sbjct: 529 MLYNLGLLLQENSRFAEALHYYKLAIGSRPTLASAYLNTGIILMNQGKTEEARRTFLKC 587
>sp|P33292|PEX5_PICPA Peroxisomal targeting signal receptor OS=Komagataella pastoris
GN=PEX5 PE=3 SV=2
Length = 576
Score = 36.2 bits (82), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 167 FQVSVEQEATRLLG--NLGWALMQQNNYIEAEDAYRRALSIAPDNNKM-CNLGICLMKQG 223
F+ ++E E + L LG AL N EA +AY RAL + P+ + NLG+ + G
Sbjct: 445 FKAAIEVEPDKALNWNRLGAALANYNKPEEAVEAYSRALQLNPNFVRARYNLGVSFINMG 504
Query: 224 RIGEAKETL 232
R EA E L
Sbjct: 505 RYKEAVEHL 513
>sp|Q61371|IFT88_MOUSE Intraflagellar transport protein 88 homolog OS=Mus musculus
GN=Ift88 PE=1 SV=2
Length = 824
Score = 35.8 bits (81), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 10/79 (12%)
Query: 167 FQVSVEQE----ATRLLGNLGWALMQQNNYIEAEDAYRRALSIAPDNNK------MCNLG 216
+QV V+ + A RL N+G ++Q NY +A YR AL P +K M N+G
Sbjct: 219 YQVIVKNKMFSNAGRLKVNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIG 278
Query: 217 ICLMKQGRIGEAKETLRRV 235
I +K G+ +A + +
Sbjct: 279 ITFIKTGQYSDAINSFEHI 297
>sp|O15294|OGT1_HUMAN UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit OS=Homo sapiens GN=OGT PE=1 SV=3
Length = 1046
Score = 35.8 bits (81), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 52/120 (43%), Gaps = 14/120 (11%)
Query: 180 GNLGWALMQQNNYIEAEDAYRRALSIAPDN-NKMCNLGICLMKQGRIGEAKE---TLRRV 235
GNL +Q A D YRRA+ + P + CNL L ++G + EA++ T R+
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 322
Query: 236 KPAVADGPR----------GVDSHLKAYERAQQMLKDLESEMMNKGGDRVEQSRLFDAFL 285
P AD ++ ++ Y +A ++ + + N +Q +L +A +
Sbjct: 323 CPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALM 382
Score = 35.8 bits (81), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 11/167 (6%)
Query: 181 NLGWALMQQNNYIEAEDAYRRALSIAPDN-NKMCNLGICLMKQGRIGEAKETLRRVKPAV 239
NL AL ++ + EAED Y AL + P + + + NL +QG I EA +R + A+
Sbjct: 298 NLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEA---VRLYRKAL 354
Query: 240 ADGPRGVDSHLKAYERAQQMLKDLESEMMNKGGDRVEQSRLFDAFLG-SSSIWQPQPCKD 298
P +H QQ K E+ M K R+ + DA+ +++ + Q +
Sbjct: 355 EVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT-FADAYSNMGNTLKEMQDVQG 413
Query: 299 HILPTTNAIKTRDDFADEN-----IDSNVDVNPIVLSKHRSVKKLFP 340
+ T AI+ FAD + I + P ++ +R+ KL P
Sbjct: 414 ALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKP 460
Score = 33.9 bits (76), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Query: 179 LGNLGWALMQQNNYIEAEDAYRRALSIAPD-NNKMCNLGICLMKQGRIGEA----KETLR 233
L NL +Q N EA YR+AL + P+ NL L +QG++ EA KE +
Sbjct: 330 LNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAI- 388
Query: 234 RVKPAVADGPRGVDSHLKAYERAQQMLK 261
R+ P AD + + LK + Q L+
Sbjct: 389 RISPTFADAYSNMGNTLKEMQDVQGALQ 416
>sp|P81436|OGT1_RABIT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit OS=Oryctolagus cuniculus GN=OGT PE=1
SV=2
Length = 1046
Score = 35.8 bits (81), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 52/120 (43%), Gaps = 14/120 (11%)
Query: 180 GNLGWALMQQNNYIEAEDAYRRALSIAPDN-NKMCNLGICLMKQGRIGEAKE---TLRRV 235
GNL +Q A D YRRA+ + P + CNL L ++G + EA++ T R+
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 322
Query: 236 KPAVADGPR----------GVDSHLKAYERAQQMLKDLESEMMNKGGDRVEQSRLFDAFL 285
P AD ++ ++ Y +A ++ + + N +Q +L +A +
Sbjct: 323 CPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALM 382
Score = 35.8 bits (81), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 11/167 (6%)
Query: 181 NLGWALMQQNNYIEAEDAYRRALSIAPDN-NKMCNLGICLMKQGRIGEAKETLRRVKPAV 239
NL AL ++ + EAED Y AL + P + + + NL +QG I EA +R + A+
Sbjct: 298 NLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEA---VRLYRKAL 354
Query: 240 ADGPRGVDSHLKAYERAQQMLKDLESEMMNKGGDRVEQSRLFDAFLG-SSSIWQPQPCKD 298
P +H QQ K E+ M K R+ + DA+ +++ + Q +
Sbjct: 355 EVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT-FADAYSNMGNTLKEMQDVQG 413
Query: 299 HILPTTNAIKTRDDFADEN-----IDSNVDVNPIVLSKHRSVKKLFP 340
+ T AI+ FAD + I + P ++ +R+ KL P
Sbjct: 414 ALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKP 460
Score = 33.9 bits (76), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Query: 179 LGNLGWALMQQNNYIEAEDAYRRALSIAPD-NNKMCNLGICLMKQGRIGEA----KETLR 233
L NL +Q N EA YR+AL + P+ NL L +QG++ EA KE +
Sbjct: 330 LNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAI- 388
Query: 234 RVKPAVADGPRGVDSHLKAYERAQQMLK 261
R+ P AD + + LK + Q L+
Sbjct: 389 RISPTFADAYSNMGNTLKEMQDVQGALQ 416
>sp|Q27HV0|OGT1_PIG UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit OS=Sus scrofa GN=OGT PE=2 SV=1
Length = 1046
Score = 35.8 bits (81), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 52/120 (43%), Gaps = 14/120 (11%)
Query: 180 GNLGWALMQQNNYIEAEDAYRRALSIAPDN-NKMCNLGICLMKQGRIGEAKE---TLRRV 235
GNL +Q A D YRRA+ + P + CNL L ++G + EA++ T R+
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 322
Query: 236 KPAVADGPR----------GVDSHLKAYERAQQMLKDLESEMMNKGGDRVEQSRLFDAFL 285
P AD ++ ++ Y +A ++ + + N +Q +L +A +
Sbjct: 323 CPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALM 382
Score = 35.8 bits (81), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 11/167 (6%)
Query: 181 NLGWALMQQNNYIEAEDAYRRALSIAPDN-NKMCNLGICLMKQGRIGEAKETLRRVKPAV 239
NL AL ++ + EAED Y AL + P + + + NL +QG I EA +R + A+
Sbjct: 298 NLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEA---VRLYRKAL 354
Query: 240 ADGPRGVDSHLKAYERAQQMLKDLESEMMNKGGDRVEQSRLFDAFLG-SSSIWQPQPCKD 298
P +H QQ K E+ M K R+ + DA+ +++ + Q +
Sbjct: 355 EVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT-FADAYSNMGNTLKEMQDVQG 413
Query: 299 HILPTTNAIKTRDDFADEN-----IDSNVDVNPIVLSKHRSVKKLFP 340
+ T AI+ FAD + I + P ++ +R+ KL P
Sbjct: 414 ALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKP 460
Score = 34.3 bits (77), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Query: 179 LGNLGWALMQQNNYIEAEDAYRRALSIAPD-NNKMCNLGICLMKQGRIGEA----KETLR 233
L NL +Q N EA YR+AL + P+ NL L +QG++ EA KE +
Sbjct: 330 LNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAI- 388
Query: 234 RVKPAVADGPRGVDSHLKAYERAQQMLK 261
R+ P AD + + LK + Q L+
Sbjct: 389 RISPTFADAYSNMGNTLKEMQDVQGALQ 416
>sp|Q8CGY8|OGT1_MOUSE UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit OS=Mus musculus GN=Ogt PE=1 SV=2
Length = 1046
Score = 35.8 bits (81), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 52/120 (43%), Gaps = 14/120 (11%)
Query: 180 GNLGWALMQQNNYIEAEDAYRRALSIAPDN-NKMCNLGICLMKQGRIGEAKE---TLRRV 235
GNL +Q A D YRRA+ + P + CNL L ++G + EA++ T R+
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 322
Query: 236 KPAVADGPR----------GVDSHLKAYERAQQMLKDLESEMMNKGGDRVEQSRLFDAFL 285
P AD ++ ++ Y +A ++ + + N +Q +L +A +
Sbjct: 323 CPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALM 382
Score = 35.8 bits (81), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 11/167 (6%)
Query: 181 NLGWALMQQNNYIEAEDAYRRALSIAPDN-NKMCNLGICLMKQGRIGEAKETLRRVKPAV 239
NL AL ++ + EAED Y AL + P + + + NL +QG I EA +R + A+
Sbjct: 298 NLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEA---VRLYRKAL 354
Query: 240 ADGPRGVDSHLKAYERAQQMLKDLESEMMNKGGDRVEQSRLFDAFLG-SSSIWQPQPCKD 298
P +H QQ K E+ M K R+ + DA+ +++ + Q +
Sbjct: 355 EVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT-FADAYSNMGNTLKEMQDVQG 413
Query: 299 HILPTTNAIKTRDDFADEN-----IDSNVDVNPIVLSKHRSVKKLFP 340
+ T AI+ FAD + I + P ++ +R+ KL P
Sbjct: 414 ALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKP 460
Score = 33.9 bits (76), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Query: 179 LGNLGWALMQQNNYIEAEDAYRRALSIAPD-NNKMCNLGICLMKQGRIGEA----KETLR 233
L NL +Q N EA YR+AL + P+ NL L +QG++ EA KE +
Sbjct: 330 LNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAI- 388
Query: 234 RVKPAVADGPRGVDSHLKAYERAQQMLK 261
R+ P AD + + LK + Q L+
Sbjct: 389 RISPTFADAYSNMGNTLKEMQDVQGALQ 416
>sp|P56558|OGT1_RAT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit OS=Rattus norvegicus GN=Ogt PE=1 SV=1
Length = 1036
Score = 35.8 bits (81), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 52/120 (43%), Gaps = 14/120 (11%)
Query: 180 GNLGWALMQQNNYIEAEDAYRRALSIAPDN-NKMCNLGICLMKQGRIGEAKE---TLRRV 235
GNL +Q A D YRRA+ + P + CNL L ++G + EA++ T R+
Sbjct: 253 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 312
Query: 236 KPAVADGPR----------GVDSHLKAYERAQQMLKDLESEMMNKGGDRVEQSRLFDAFL 285
P AD ++ ++ Y +A ++ + + N +Q +L +A +
Sbjct: 313 CPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALM 372
Score = 35.4 bits (80), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 11/167 (6%)
Query: 181 NLGWALMQQNNYIEAEDAYRRALSIAPDN-NKMCNLGICLMKQGRIGEAKETLRRVKPAV 239
NL AL ++ + EAED Y AL + P + + + NL +QG I EA +R + A+
Sbjct: 288 NLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEA---VRLYRKAL 344
Query: 240 ADGPRGVDSHLKAYERAQQMLKDLESEMMNKGGDRVEQSRLFDAFLG-SSSIWQPQPCKD 298
P +H QQ K E+ M K R+ + DA+ +++ + Q +
Sbjct: 345 EVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT-FADAYSNMGNTLKEMQDVQG 403
Query: 299 HILPTTNAIKTRDDFADEN-----IDSNVDVNPIVLSKHRSVKKLFP 340
+ T AI+ FAD + I + P ++ +R+ KL P
Sbjct: 404 ALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKP 450
Score = 33.9 bits (76), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Query: 179 LGNLGWALMQQNNYIEAEDAYRRALSIAPD-NNKMCNLGICLMKQGRIGEA----KETLR 233
L NL +Q N EA YR+AL + P+ NL L +QG++ EA KE +
Sbjct: 320 LNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAI- 378
Query: 234 RVKPAVADGPRGVDSHLKAYERAQQMLK 261
R+ P AD + + LK + Q L+
Sbjct: 379 RISPTFADAYSNMGNTLKEMQDVQGALQ 406
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 35.4 bits (80), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 32/70 (45%)
Query: 64 KAIPLFWAAINAGDRVDSALKDMAIVMKQQNRAEEAIEAIKSLRSRCSDQAQESLDNILL 123
KA+ L W + G R+DS + + E + + R ++ + + L+
Sbjct: 602 KALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALV 661
Query: 124 DLYKRCGRLD 133
D+Y +CGRLD
Sbjct: 662 DMYSKCGRLD 671
>sp|B2UAX2|ALR_RALPJ Alanine racemase OS=Ralstonia pickettii (strain 12J) GN=alr PE=3
SV=1
Length = 374
Score = 35.0 bits (79), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 17/63 (26%)
Query: 240 ADGPRGVDSHLKAYERAQQMLKDLESEMMNKGGDRVEQSRLFDAFLGSSSIWQPQPCKDH 299
ADGPRG++ L A+ERA Q L E+ + N ++++W P+ +D
Sbjct: 163 ADGPRGIEHQLAAFERATQGLPG-EASLSNS----------------AATLWHPKAHRDW 205
Query: 300 ILP 302
+ P
Sbjct: 206 VRP 208
>sp|Q8XZM4|ALR_RALSO Alanine racemase OS=Ralstonia solanacearum (strain GMI1000) GN=alr
PE=3 SV=1
Length = 375
Score = 34.7 bits (78), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 17/63 (26%)
Query: 240 ADGPRGVDSHLKAYERAQQMLKDLESEMMNKGGDRVEQSRLFDAFLGSSSIWQPQPCKDH 299
ADGPRG+D L A+E+A Q L E+ + N ++++W P+ +D
Sbjct: 163 ADGPRGIDHQLAAFEQATQGLPG-EASLSNS----------------AATLWHPRAHRDW 205
Query: 300 ILP 302
+ P
Sbjct: 206 VRP 208
>sp|O43765|SGTA_HUMAN Small glutamine-rich tetratricopeptide repeat-containing protein
alpha OS=Homo sapiens GN=SGTA PE=1 SV=1
Length = 313
Score = 34.3 bits (77), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 143 LYLIQQGLAFNGKRTKTARSQGKKFQVSVEQEATRLLGNLGWALMQQNNYIEAEDAYRRA 202
+Y + A++ Q + + ++ ++ G +G AL N ++EA Y++A
Sbjct: 126 VYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKA 185
Query: 203 LSIAPDNNKM-CNLGICLMK 221
L + PDN NL I +K
Sbjct: 186 LELDPDNETYKSNLKIAELK 205
>sp|Q32LM2|SGTA_BOVIN Small glutamine-rich tetratricopeptide repeat-containing protein
alpha OS=Bos taurus GN=SGTA PE=2 SV=1
Length = 313
Score = 33.9 bits (76), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 31/67 (46%)
Query: 143 LYLIQQGLAFNGKRTKTARSQGKKFQVSVEQEATRLLGNLGWALMQQNNYIEAEDAYRRA 202
+Y + A++ Q + + ++ ++ G +G AL N + EA YR+A
Sbjct: 126 VYFCNRAAAYSKLGNYAGAVQDCERAICIDPSYSKAYGRMGLALSSLNKHTEAVAYYRKA 185
Query: 203 LSIAPDN 209
L + PDN
Sbjct: 186 LELDPDN 192
>sp|Q13099|IFT88_HUMAN Intraflagellar transport protein 88 homolog OS=Homo sapiens
GN=IFT88 PE=2 SV=2
Length = 833
Score = 33.9 bits (76), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 33/64 (51%)
Query: 172 EQEATRLLGNLGWALMQQNNYIEAEDAYRRALSIAPDNNKMCNLGICLMKQGRIGEAKET 231
+Q +++ N+G +Q Y +A ++Y +S+AP+ NL IC G + K+
Sbjct: 277 KQMRIKIMQNIGVTFIQAGQYSDAINSYEHIMSMAPNLKAGYNLTICYFAIGDREKMKKA 336
Query: 232 LRRV 235
+++
Sbjct: 337 FQKL 340
>sp|O70593|SGTA_RAT Small glutamine-rich tetratricopeptide repeat-containing protein
alpha OS=Rattus norvegicus GN=Sgta PE=1 SV=1
Length = 314
Score = 33.1 bits (74), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 143 LYLIQQGLAFNGKRTKTARSQGKKFQVSVEQEATRLLGNLGWALMQQNNYIEAEDAYRRA 202
+Y + A++ Q + + ++ ++ G +G AL N + EA Y++A
Sbjct: 126 VYFCNRAAAYSKLGNYVGAVQDCERAIGIDPGYSKAYGRMGLALSSLNKHAEAVAYYKKA 185
Query: 203 LSIAPDNNKM-CNLGICLMK 221
L + PDN+ NL I +K
Sbjct: 186 LELDPDNDTYKSNLKIAELK 205
>sp|Q8BJU0|SGTA_MOUSE Small glutamine-rich tetratricopeptide repeat-containing protein
alpha OS=Mus musculus GN=Sgta PE=1 SV=2
Length = 315
Score = 33.1 bits (74), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 143 LYLIQQGLAFNGKRTKTARSQGKKFQVSVEQEATRLLGNLGWALMQQNNYIEAEDAYRRA 202
+Y + A++ Q + + ++ ++ G +G AL N + EA Y++A
Sbjct: 127 VYFCNRAAAYSKLGNYVGAVQDCERAIGIDPGYSKAYGRMGLALSSLNKHAEAVAYYKKA 186
Query: 203 LSIAPDNNKM-CNLGICLMK 221
L + PDN+ NL I +K
Sbjct: 187 LELDPDNDTYKSNLKIAELK 206
>sp|Q9V3X5|TMTC2_DROME Transmembrane and TPR repeat-containing protein CG4341
OS=Drosophila melanogaster GN=CG4341 PE=2 SV=1
Length = 938
Score = 32.7 bits (73), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 196 EDAYRRALSIAPDNNKMCNLGICLMKQGRIGEAKETLR---RVKPAVAD 241
E YR A++I P + NLG L QGR EAK+ L+ R +P +AD
Sbjct: 590 ESLYRSAIAINPPK-ALGNLGSVLSSQGRYEEAKQVLQEAIRFRPNMAD 637
>sp|Q84JR9|TTL4_ARATH TPR repeat-containing thioredoxin TTL4 OS=Arabidopsis thaliana
GN=TTL4 PE=2 SV=1
Length = 682
Score = 32.7 bits (73), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 38/83 (45%), Gaps = 14/83 (16%)
Query: 183 GWALMQQNNYIEAEDAYRRALSIAPDNNKM-CNLGICLMKQGRIGEA-KETLRRVKPAVA 240
G + ++ NY EA Y RA+S++P+N N L GR+ EA KE L AV
Sbjct: 218 GNVMYRKGNYAEALALYDRAISLSPENPAYRSNRAAALAASGRLEEAVKECLE----AVR 273
Query: 241 DGPRGVDSHLKAYERAQQMLKDL 263
P +Y RA Q L L
Sbjct: 274 CDP--------SYARAHQRLASL 288
>sp|Q313L3|SECA_DESDG Protein translocase subunit SecA OS=Desulfovibrio desulfuricans
(strain G20) GN=secA PE=3 SV=2
Length = 864
Score = 32.7 bits (73), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 57/130 (43%), Gaps = 7/130 (5%)
Query: 76 GDRVDSALKDMAIVMKQQNRAEEAI-----EAIKSLRSRCSDQAQE--SLDNILLDLYKR 128
G + D LK + +K+ N EE I EAI + + + Q+ SLD+IL +++
Sbjct: 11 GSKNDRYLKSLNHYLKEINALEENIATMPDEAISARMAELRAEVQQGTSLDSILPEVFAM 70
Query: 129 CGRLDDQIALLKHKLYLIQQGLAFNGKRTKTARSQGKKFQVSVEQEATRLLGNLGWALMQ 188
++ ++H + G+A + + R+ K V+ A L G L+
Sbjct: 71 VREAGKRVLGMRHYDVQMVGGIALHSGKIAEMRTGEGKTLVATLPAALNALTGKGVHLIT 130
Query: 189 QNNYIEAEDA 198
N+Y+ DA
Sbjct: 131 VNDYLARRDA 140
>sp|Q9QYI3|DNJC7_MOUSE DnaJ homolog subfamily C member 7 OS=Mus musculus GN=Dnajc7 PE=1
SV=2
Length = 494
Score = 32.3 bits (72), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 18/90 (20%)
Query: 183 GWALMQQNNYIEAEDAYRRALSIAPDNNK-----MCNLGICLMKQGRIGEAKETLRRVKP 237
G ++ NY A + Y AL I P+N K CN G LR+++
Sbjct: 263 GNKAFKEGNYKLAYELYTEALGIDPNNIKTNAKLYCNRGT----------VNSKLRQLED 312
Query: 238 AVADGPRGV---DSHLKAYERAQQMLKDLE 264
A+ D V D+++KAY R Q D E
Sbjct: 313 AIEDCTNAVKLDDTYIKAYLRRAQCYMDTE 342
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.130 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 193,748,767
Number of Sequences: 539616
Number of extensions: 8186044
Number of successful extensions: 20120
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 66
Number of HSP's that attempted gapping in prelim test: 20038
Number of HSP's gapped (non-prelim): 142
length of query: 524
length of database: 191,569,459
effective HSP length: 122
effective length of query: 402
effective length of database: 125,736,307
effective search space: 50545995414
effective search space used: 50545995414
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 64 (29.3 bits)