Query 009851
Match_columns 524
No_of_seqs 163 out of 1689
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 14:25:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009851.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009851hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 7E-68 2.4E-72 543.0 35.3 431 3-493 13-453 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 4.7E-63 1.6E-67 517.3 38.9 451 1-492 6-477 (482)
3 2vch_A Hydroquinone glucosyltr 100.0 1.2E-60 4.2E-65 497.4 44.1 436 3-495 6-470 (480)
4 2c1x_A UDP-glucose flavonoid 3 100.0 4E-61 1.4E-65 497.9 35.1 433 3-492 7-450 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 1.2E-58 3.9E-63 480.7 38.1 430 3-493 9-462 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 1.1E-44 3.7E-49 373.6 35.2 397 1-497 10-421 (424)
7 1iir_A Glycosyltransferase GTF 100.0 2.7E-44 9.2E-49 369.5 26.1 394 4-498 1-401 (415)
8 4amg_A Snogd; transferase, pol 100.0 3.2E-43 1.1E-47 359.6 24.3 358 3-495 22-398 (400)
9 1rrv_A Glycosyltransferase GTF 100.0 6.2E-43 2.1E-47 359.5 24.4 395 4-499 1-403 (416)
10 3h4t_A Glycosyltransferase GTF 100.0 1.2E-40 4E-45 340.9 23.5 378 4-498 1-383 (404)
11 3rsc_A CALG2; TDP, enediyne, s 100.0 7.9E-39 2.7E-43 328.8 33.3 380 3-497 20-413 (415)
12 3ia7_A CALG4; glycosysltransfe 100.0 1.7E-38 5.9E-43 324.6 35.2 388 1-497 2-398 (402)
13 2iyf_A OLED, oleandomycin glyc 100.0 1E-37 3.5E-42 322.0 33.8 382 1-497 5-399 (430)
14 2p6p_A Glycosyl transferase; X 100.0 2.8E-37 9.6E-42 313.9 34.5 353 4-497 1-379 (384)
15 2yjn_A ERYCIII, glycosyltransf 100.0 8.3E-38 2.8E-42 323.7 29.0 375 3-497 20-435 (441)
16 4fzr_A SSFS6; structural genom 100.0 2.2E-35 7.4E-40 301.5 20.8 346 3-473 15-384 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 3.6E-34 1.2E-38 292.4 25.6 351 3-496 20-396 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 9.3E-33 3.2E-37 281.2 29.8 358 3-497 1-388 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 2.6E-30 8.9E-35 264.9 32.9 367 3-497 20-408 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 9.3E-27 3.2E-31 234.2 23.6 339 2-497 1-356 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.9 1E-26 3.6E-31 207.9 17.7 164 294-473 6-170 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.8 2.2E-18 7.4E-23 173.1 25.7 339 1-498 2-356 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.6 1.8E-13 6E-18 130.8 18.7 115 309-436 157-274 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.5 3.7E-14 1.3E-18 130.0 8.7 131 307-454 26-196 (224)
25 3c48_A Predicted glycosyltrans 99.3 7.4E-10 2.5E-14 113.5 30.0 113 366-498 305-428 (438)
26 3okp_A GDP-mannose-dependent a 99.3 2.3E-10 7.8E-15 115.4 25.6 350 1-497 2-381 (394)
27 3fro_A GLGA glycogen synthase; 99.3 1.1E-09 3.8E-14 111.9 25.7 167 311-497 252-432 (439)
28 2iuy_A Avigt4, glycosyltransfe 99.2 1.9E-10 6.4E-15 114.0 17.0 154 312-497 164-337 (342)
29 2jjm_A Glycosyl transferase, g 99.2 1.1E-08 3.9E-13 103.1 29.4 117 366-497 266-387 (394)
30 2r60_A Glycosyl transferase, g 99.2 6.2E-09 2.1E-13 108.7 27.8 118 366-498 334-462 (499)
31 1v4v_A UDP-N-acetylglucosamine 99.2 2.6E-10 9E-15 114.5 15.8 159 309-497 198-366 (376)
32 1vgv_A UDP-N-acetylglucosamine 99.2 3E-10 1E-14 114.3 15.9 160 309-497 205-374 (384)
33 3dzc_A UDP-N-acetylglucosamine 99.2 4.9E-11 1.7E-15 120.7 9.5 137 309-466 230-376 (396)
34 3ot5_A UDP-N-acetylglucosamine 99.2 6.8E-11 2.3E-15 119.8 9.8 160 309-497 224-393 (403)
35 2gek_A Phosphatidylinositol ma 99.1 5.1E-09 1.7E-13 105.9 22.1 116 366-497 262-385 (406)
36 3beo_A UDP-N-acetylglucosamine 99.1 4E-09 1.4E-13 105.6 18.0 159 309-496 205-373 (375)
37 2iw1_A Lipopolysaccharide core 99.0 5.2E-08 1.8E-12 97.3 24.4 135 309-464 195-344 (374)
38 2x6q_A Trehalose-synthase TRET 98.9 2.6E-07 8.9E-12 93.8 25.8 84 366-463 292-385 (416)
39 4hwg_A UDP-N-acetylglucosamine 98.8 1E-07 3.4E-12 95.7 16.0 130 309-460 203-345 (385)
40 1rzu_A Glycogen synthase 1; gl 98.6 5E-06 1.7E-10 86.1 24.2 162 311-497 292-477 (485)
41 3s28_A Sucrose synthase 1; gly 98.6 6.2E-06 2.1E-10 89.8 23.1 86 366-463 639-740 (816)
42 3oy2_A Glycosyltransferase B73 98.5 2.7E-05 9.3E-10 78.6 25.8 114 369-498 256-393 (413)
43 2qzs_A Glycogen synthase; glyc 98.5 2.1E-05 7.2E-10 81.4 23.5 161 310-497 292-478 (485)
44 2vsy_A XCC0866; transferase, g 98.4 0.0003 1E-08 74.2 31.6 119 367-497 434-561 (568)
45 2f9f_A First mannosyl transfer 98.4 8.6E-07 2.9E-11 78.6 9.9 139 311-468 24-174 (177)
46 2hy7_A Glucuronosyltransferase 98.2 0.0006 2.1E-08 68.7 25.9 117 311-459 223-354 (406)
47 4gyw_A UDP-N-acetylglucosamine 98.0 3.8E-05 1.3E-09 83.2 12.8 168 308-496 521-702 (723)
48 2xci_A KDO-transferase, 3-deox 98.0 0.00027 9.3E-09 70.4 17.6 93 368-470 261-362 (374)
49 3qhp_A Type 1 capsular polysac 97.6 0.00076 2.6E-08 58.3 12.6 129 310-462 2-145 (166)
50 2bfw_A GLGA glycogen synthase; 97.5 0.0021 7.2E-08 57.3 14.4 82 368-462 96-186 (200)
51 3q3e_A HMW1C-like glycosyltran 97.4 0.00093 3.2E-08 69.6 11.8 145 309-464 440-595 (631)
52 3tov_A Glycosyl transferase fa 96.9 0.019 6.7E-07 56.2 15.7 105 2-133 7-115 (349)
53 1psw_A ADP-heptose LPS heptosy 96.8 0.088 3E-06 51.2 19.5 103 4-133 1-106 (348)
54 3rhz_A GTF3, nucleotide sugar 96.7 0.0023 7.9E-08 62.5 6.6 94 368-473 215-322 (339)
55 2x0d_A WSAF; GT4 family, trans 95.5 0.0098 3.3E-07 59.9 4.5 85 366-463 294-385 (413)
56 3vue_A GBSS-I, granule-bound s 93.8 0.3 1E-05 50.7 10.9 138 309-456 326-476 (536)
57 2phj_A 5'-nucleotidase SURE; S 87.9 1.4 4.8E-05 40.3 7.6 113 4-136 2-127 (251)
58 1g5t_A COB(I)alamin adenosyltr 85.6 8.4 0.00029 33.7 11.2 98 3-118 28-131 (196)
59 2wqk_A 5'-nucleotidase SURE; S 82.6 3.2 0.00011 38.0 7.5 113 4-136 2-127 (251)
60 3vue_A GBSS-I, granule-bound s 82.2 0.88 3E-05 47.2 3.9 37 3-41 9-53 (536)
61 2yxb_A Coenzyme B12-dependent 82.1 10 0.00035 32.0 10.0 109 3-133 18-126 (161)
62 1ccw_A Protein (glutamate muta 80.7 2.5 8.7E-05 34.7 5.5 43 1-43 1-43 (137)
63 3t6k_A Response regulator rece 78.9 20 0.00067 28.5 10.6 33 1-37 2-34 (136)
64 2q5c_A NTRC family transcripti 78.5 15 0.0005 32.2 10.1 45 90-140 128-172 (196)
65 3qxc_A Dethiobiotin synthetase 78.5 4.7 0.00016 36.7 7.1 36 3-38 20-57 (242)
66 2x0d_A WSAF; GT4 family, trans 78.5 1.1 3.9E-05 44.5 3.2 39 3-41 46-89 (413)
67 3zqu_A Probable aromatic acid 78.1 2.4 8.2E-05 37.7 4.8 47 1-48 1-48 (209)
68 2e6c_A 5'-nucleotidase SURE; S 76.6 11 0.00037 34.3 8.8 110 5-136 2-129 (244)
69 3i42_A Response regulator rece 75.5 17 0.00059 28.2 9.2 34 1-38 1-34 (127)
70 3jte_A Response regulator rece 75.5 26 0.00088 27.9 10.5 35 1-39 1-35 (143)
71 1id1_A Putative potassium chan 75.0 2.6 8.9E-05 35.1 4.1 35 1-40 1-35 (153)
72 2gt1_A Lipopolysaccharide hept 74.9 17 0.00057 34.4 10.4 46 4-49 1-48 (326)
73 4b4k_A N5-carboxyaminoimidazol 74.7 16 0.00054 31.2 8.6 144 309-477 22-176 (181)
74 2bw0_A 10-FTHFDH, 10-formyltet 74.3 16 0.00053 35.0 9.8 34 1-39 20-53 (329)
75 3nb0_A Glycogen [starch] synth 73.9 23 0.00078 37.4 11.5 46 367-414 490-551 (725)
76 4dim_A Phosphoribosylglycinami 73.8 14 0.00048 36.2 9.8 36 1-41 5-40 (403)
77 3lqk_A Dipicolinate synthase s 73.6 3.2 0.00011 36.6 4.4 44 2-46 6-50 (201)
78 2qr3_A Two-component system re 73.3 25 0.00084 27.8 9.7 34 1-38 1-34 (140)
79 2gt1_A Lipopolysaccharide hept 73.0 3 0.0001 39.7 4.5 134 309-457 178-322 (326)
80 3qjg_A Epidermin biosynthesis 72.0 4.1 0.00014 35.0 4.6 42 4-46 6-47 (175)
81 2rjn_A Response regulator rece 71.7 36 0.0012 27.4 10.6 30 3-36 7-36 (154)
82 1j9j_A Stationary phase surviV 71.5 14 0.00047 33.7 8.2 112 5-136 2-128 (247)
83 4dzz_A Plasmid partitioning pr 71.4 21 0.00071 30.8 9.4 81 5-116 2-84 (206)
84 2v4n_A Multifunctional protein 70.6 17 0.00057 33.2 8.6 111 4-136 2-126 (254)
85 1l5x_A SurviVal protein E; str 70.5 14 0.00049 34.2 8.2 112 5-137 2-128 (280)
86 3fgn_A Dethiobiotin synthetase 69.8 33 0.0011 31.2 10.5 119 4-138 26-167 (251)
87 3rqi_A Response regulator prot 67.9 33 0.0011 28.9 9.8 33 1-37 5-37 (184)
88 3mcu_A Dipicolinate synthase, 67.5 5.3 0.00018 35.4 4.4 43 2-45 4-47 (207)
89 3q0i_A Methionyl-tRNA formyltr 67.0 30 0.001 32.8 9.9 36 1-41 5-40 (318)
90 3oow_A Phosphoribosylaminoimid 66.7 57 0.0019 27.4 12.4 144 310-478 6-160 (166)
91 3bfv_A CAPA1, CAPB2, membrane 66.5 41 0.0014 30.8 10.7 40 3-42 81-122 (271)
92 1mvl_A PPC decarboxylase athal 66.3 6.5 0.00022 34.8 4.8 44 2-47 18-61 (209)
93 1uqt_A Alpha, alpha-trehalose- 66.3 24 0.00081 35.7 9.6 107 369-495 333-454 (482)
94 3eod_A Protein HNR; response r 66.3 43 0.0015 25.9 10.7 31 3-37 7-37 (130)
95 2ejb_A Probable aromatic acid 66.0 8.5 0.00029 33.5 5.4 44 4-48 2-45 (189)
96 3t5t_A Putative glycosyltransf 63.2 31 0.0011 35.0 9.7 110 368-496 353-474 (496)
97 2pn1_A Carbamoylphosphate synt 63.0 14 0.00049 34.9 7.0 35 1-41 2-38 (331)
98 3m6m_D Sensory/regulatory prot 62.9 39 0.0013 27.0 8.9 32 106-137 57-99 (143)
99 3grc_A Sensor protein, kinase; 62.8 54 0.0018 25.7 10.9 34 106-139 49-91 (140)
100 3vot_A L-amino acid ligase, BL 62.3 19 0.00064 35.6 8.0 97 1-131 1-101 (425)
101 3of5_A Dethiobiotin synthetase 62.1 22 0.00075 31.8 7.6 36 3-38 3-40 (228)
102 1dbw_A Transcriptional regulat 61.8 52 0.0018 25.2 10.7 33 1-37 1-33 (126)
103 3tov_A Glycosyl transferase fa 60.7 34 0.0012 32.8 9.3 99 5-137 187-289 (349)
104 2qxy_A Response regulator; reg 60.0 61 0.0021 25.5 9.7 30 3-36 4-33 (142)
105 3cio_A ETK, tyrosine-protein k 59.6 53 0.0018 30.6 10.2 38 4-41 104-143 (299)
106 3c3m_A Response regulator rece 59.6 62 0.0021 25.4 10.5 32 1-36 1-32 (138)
107 2ywr_A Phosphoribosylglycinami 59.3 70 0.0024 28.2 10.4 103 4-137 2-111 (216)
108 1sbz_A Probable aromatic acid 59.2 8.8 0.0003 33.6 4.2 43 5-48 2-45 (197)
109 3rg8_A Phosphoribosylaminoimid 58.9 32 0.0011 28.8 7.3 138 311-474 4-149 (159)
110 3crn_A Response regulator rece 58.6 62 0.0021 25.1 10.4 32 1-36 1-32 (132)
111 3sc4_A Short chain dehydrogena 58.6 51 0.0017 30.3 9.9 36 3-41 8-43 (285)
112 1p3y_1 MRSD protein; flavoprot 58.5 4.2 0.00014 35.7 2.0 43 3-46 8-50 (194)
113 3gt7_A Sensor protein; structu 58.4 71 0.0024 25.7 10.4 31 3-37 7-37 (154)
114 3oid_A Enoyl-[acyl-carrier-pro 58.4 25 0.00085 32.0 7.5 36 1-39 1-36 (258)
115 1g63_A Epidermin modifying enz 58.1 7.5 0.00026 33.6 3.5 45 1-47 1-45 (181)
116 2rdm_A Response regulator rece 57.7 63 0.0021 24.9 10.8 32 1-36 3-34 (132)
117 3la6_A Tyrosine-protein kinase 57.6 43 0.0015 31.0 9.1 39 4-42 92-132 (286)
118 1qzu_A Hypothetical protein MD 57.3 6.9 0.00024 34.6 3.2 45 2-47 18-63 (206)
119 1psw_A ADP-heptose LPS heptosy 56.9 91 0.0031 29.3 11.7 102 5-136 182-288 (348)
120 3q9l_A Septum site-determining 56.6 43 0.0015 30.1 8.9 37 5-41 3-41 (260)
121 4ds3_A Phosphoribosylglycinami 56.6 43 0.0015 29.5 8.3 105 1-137 5-117 (209)
122 3auf_A Glycinamide ribonucleot 56.1 1.1E+02 0.0038 27.2 11.3 104 3-137 22-132 (229)
123 3ghy_A Ketopantoate reductase 55.8 9.8 0.00034 36.4 4.4 43 1-48 1-43 (335)
124 3sju_A Keto reductase; short-c 55.7 41 0.0014 30.8 8.7 37 1-40 21-57 (279)
125 3u7q_B Nitrogenase molybdenum- 55.2 1E+02 0.0035 31.3 12.1 33 4-41 365-397 (523)
126 3osu_A 3-oxoacyl-[acyl-carrier 55.0 60 0.002 29.0 9.5 37 1-40 1-37 (246)
127 1xmp_A PURE, phosphoribosylami 54.8 96 0.0033 26.1 12.4 145 309-477 11-165 (170)
128 2vqe_B 30S ribosomal protein S 54.1 11 0.00037 34.4 4.1 35 106-140 157-193 (256)
129 1y80_A Predicted cobalamin bin 54.0 20 0.00069 31.5 5.9 44 3-46 88-131 (210)
130 3dm5_A SRP54, signal recogniti 53.7 43 0.0015 33.3 8.7 40 5-44 102-141 (443)
131 3gpi_A NAD-dependent epimerase 53.6 14 0.00047 34.1 5.0 36 1-41 1-36 (286)
132 2iz6_A Molybdenum cofactor car 53.4 92 0.0031 26.5 9.7 78 370-456 92-173 (176)
133 3hv2_A Response regulator/HD d 53.3 85 0.0029 25.1 9.8 33 106-138 57-96 (153)
134 3gi1_A LBP, laminin-binding pr 53.0 55 0.0019 30.3 9.0 80 31-136 178-259 (286)
135 3ged_A Short-chain dehydrogena 52.8 47 0.0016 30.1 8.2 33 5-40 3-35 (247)
136 2vo1_A CTP synthase 1; pyrimid 52.6 13 0.00045 34.0 4.2 44 1-44 20-66 (295)
137 3igf_A ALL4481 protein; two-do 51.6 30 0.001 33.6 7.0 36 4-39 2-38 (374)
138 3g1w_A Sugar ABC transporter; 51.5 1.3E+02 0.0044 27.4 11.6 31 106-136 60-94 (305)
139 3q9s_A DNA-binding response re 51.5 99 0.0034 27.5 10.4 33 106-138 80-118 (249)
140 1kjn_A MTH0777; hypotethical p 51.2 19 0.00064 29.7 4.5 47 3-49 6-54 (157)
141 2h31_A Multifunctional protein 51.1 70 0.0024 31.4 9.5 140 309-474 265-412 (425)
142 3av3_A Phosphoribosylglycinami 51.1 1.3E+02 0.0043 26.4 10.8 103 4-137 4-113 (212)
143 3gem_A Short chain dehydrogena 51.1 42 0.0014 30.5 7.8 36 4-42 27-62 (260)
144 3iqw_A Tail-anchored protein t 50.4 95 0.0032 29.5 10.3 41 4-44 16-57 (334)
145 3cg4_A Response regulator rece 50.4 88 0.003 24.4 10.0 13 106-118 50-62 (142)
146 3zzm_A Bifunctional purine bio 50.3 49 0.0017 33.3 8.3 99 4-120 10-114 (523)
147 1qgu_B Protein (nitrogenase mo 49.7 79 0.0027 32.2 10.2 26 106-134 433-465 (519)
148 3kuu_A Phosphoribosylaminoimid 49.1 1.2E+02 0.0041 25.6 12.0 143 311-478 14-167 (174)
149 3trh_A Phosphoribosylaminoimid 49.0 1.2E+02 0.0041 25.5 11.9 142 309-474 6-157 (169)
150 1yio_A Response regulatory pro 48.9 1.1E+02 0.0037 26.0 9.9 30 3-36 4-33 (208)
151 1ys7_A Transcriptional regulat 48.7 1.2E+02 0.0041 26.2 10.4 31 106-136 50-87 (233)
152 2i2x_B MTAC, methyltransferase 48.7 26 0.00089 32.0 5.9 101 3-129 123-224 (258)
153 3nrc_A Enoyl-[acyl-carrier-pro 48.3 86 0.0029 28.6 9.6 41 4-46 26-67 (280)
154 4gi5_A Quinone reductase; prot 48.3 27 0.00091 32.4 5.9 38 1-38 20-60 (280)
155 3bgw_A DNAB-like replicative h 48.3 47 0.0016 33.1 8.1 41 6-46 200-240 (444)
156 3zq6_A Putative arsenical pump 47.8 31 0.0011 32.7 6.5 39 4-42 14-53 (324)
157 3u7q_A Nitrogenase molybdenum- 47.3 71 0.0024 32.2 9.3 93 3-134 348-441 (492)
158 2yvq_A Carbamoyl-phosphate syn 47.2 50 0.0017 27.0 6.8 96 7-133 27-130 (143)
159 1mio_B Nitrogenase molybdenum 47.2 74 0.0025 31.8 9.4 33 93-134 377-409 (458)
160 2o1e_A YCDH; alpha-beta protei 46.9 86 0.0029 29.4 9.4 84 27-136 185-270 (312)
161 3lyl_A 3-oxoacyl-(acyl-carrier 46.9 83 0.0028 27.9 9.1 36 3-41 4-39 (247)
162 3rot_A ABC sugar transporter, 45.9 1.2E+02 0.0042 27.5 10.4 31 106-136 60-94 (297)
163 4g81_D Putative hexonate dehyd 45.8 65 0.0022 29.3 8.1 33 4-39 9-41 (255)
164 1bg6_A N-(1-D-carboxylethyl)-L 45.7 16 0.00054 35.1 4.1 35 1-40 2-36 (359)
165 3tqr_A Phosphoribosylglycinami 45.6 97 0.0033 27.3 8.8 103 3-137 5-114 (215)
166 3tqq_A Methionyl-tRNA formyltr 45.6 66 0.0023 30.3 8.3 35 3-42 2-36 (314)
167 4grd_A N5-CAIR mutase, phospho 45.6 1.4E+02 0.0047 25.2 10.9 142 309-475 12-164 (173)
168 3pdi_A Nitrogenase MOFE cofact 45.6 98 0.0033 31.1 10.0 33 93-134 393-425 (483)
169 3s55_A Putative short-chain de 45.6 43 0.0015 30.6 7.0 34 4-40 10-43 (281)
170 3kkl_A Probable chaperone prot 45.4 32 0.0011 31.1 5.9 41 1-41 1-52 (244)
171 4gbj_A 6-phosphogluconate dehy 45.2 20 0.00068 33.6 4.5 32 1-38 4-35 (297)
172 3pxx_A Carveol dehydrogenase; 44.8 46 0.0016 30.5 7.1 34 4-40 10-43 (287)
173 3ouz_A Biotin carboxylase; str 44.8 64 0.0022 31.9 8.6 36 1-41 4-39 (446)
174 3ksu_A 3-oxoacyl-acyl carrier 44.4 31 0.0011 31.4 5.7 33 4-39 11-43 (262)
175 1srr_A SPO0F, sporulation resp 44.2 1E+02 0.0035 23.3 9.4 32 1-36 1-32 (124)
176 3ucx_A Short chain dehydrogena 44.2 56 0.0019 29.6 7.5 34 4-40 11-44 (264)
177 4da9_A Short-chain dehydrogena 43.6 67 0.0023 29.4 8.0 33 4-39 29-61 (280)
178 3r0j_A Possible two component 43.6 1.3E+02 0.0045 26.5 9.9 33 106-138 66-105 (250)
179 1xhf_A DYE resistance, aerobic 43.5 1E+02 0.0035 23.2 10.5 32 1-36 1-32 (123)
180 3ezx_A MMCP 1, monomethylamine 43.4 39 0.0013 29.9 5.9 44 3-46 92-135 (215)
181 3i83_A 2-dehydropantoate 2-red 43.3 38 0.0013 31.9 6.3 40 4-49 3-42 (320)
182 2pju_A Propionate catabolism o 43.3 1.6E+02 0.0055 26.1 10.0 41 90-136 140-180 (225)
183 4fn4_A Short chain dehydrogena 42.9 86 0.003 28.4 8.4 35 3-40 6-40 (254)
184 3hn2_A 2-dehydropantoate 2-red 42.9 37 0.0013 31.8 6.1 39 4-48 3-41 (312)
185 3kht_A Response regulator; PSI 42.9 1.2E+02 0.0041 23.7 10.3 28 3-34 5-32 (144)
186 3v2h_A D-beta-hydroxybutyrate 42.8 65 0.0022 29.5 7.8 33 4-39 25-57 (281)
187 1fmt_A Methionyl-tRNA FMet for 42.4 1.4E+02 0.0048 28.0 10.0 33 3-40 3-35 (314)
188 3uve_A Carveol dehydrogenase ( 42.2 55 0.0019 30.0 7.2 33 4-39 11-43 (286)
189 4fgs_A Probable dehydrogenase 42.1 65 0.0022 29.6 7.5 34 4-40 29-62 (273)
190 3io3_A DEHA2D07832P; chaperone 41.9 83 0.0028 30.1 8.5 40 4-43 18-60 (348)
191 2xxa_A Signal recognition part 41.7 83 0.0028 31.1 8.7 40 5-44 102-142 (433)
192 4b4o_A Epimerase family protei 41.7 26 0.00088 32.4 4.8 33 4-40 1-33 (298)
193 2bru_C NAD(P) transhydrogenase 41.5 32 0.0011 29.0 4.5 39 3-41 30-71 (186)
194 4fu0_A D-alanine--D-alanine li 41.4 12 0.00041 36.1 2.4 38 1-38 1-42 (357)
195 3v8b_A Putative dehydrogenase, 41.3 73 0.0025 29.2 7.9 34 4-40 28-61 (283)
196 1o4v_A Phosphoribosylaminoimid 41.1 1.7E+02 0.0057 25.0 11.6 139 310-474 14-162 (183)
197 1e2b_A Enzyme IIB-cellobiose; 40.8 47 0.0016 25.6 5.3 40 1-40 1-40 (106)
198 2lpm_A Two-component response 40.7 18 0.00061 28.8 3.0 30 106-135 52-86 (123)
199 3e03_A Short chain dehydrogena 40.6 1.7E+02 0.0057 26.4 10.3 35 4-41 6-40 (274)
200 3u9l_A 3-oxoacyl-[acyl-carrier 40.6 36 0.0012 32.2 5.7 33 4-39 5-37 (324)
201 3mc3_A DSRE/DSRF-like family p 40.4 34 0.0011 27.6 4.7 42 3-44 15-59 (134)
202 2r8r_A Sensor protein; KDPD, P 40.3 34 0.0012 30.6 5.0 39 3-41 6-44 (228)
203 2xj4_A MIPZ; replication, cell 40.2 28 0.00094 32.2 4.7 41 1-41 1-43 (286)
204 1lss_A TRK system potassium up 40.1 30 0.001 27.4 4.4 33 3-40 4-36 (140)
205 3llv_A Exopolyphosphatase-rela 39.8 19 0.00066 29.0 3.2 33 4-41 7-39 (141)
206 3pgx_A Carveol dehydrogenase; 39.8 73 0.0025 29.0 7.6 33 4-39 15-47 (280)
207 3rfo_A Methionyl-tRNA formyltr 39.2 1.3E+02 0.0044 28.3 9.2 34 3-41 4-37 (317)
208 3t7c_A Carveol dehydrogenase; 39.1 63 0.0022 29.9 7.1 34 4-40 28-61 (299)
209 3lrx_A Putative hydrogenase; a 39.0 28 0.00096 29.0 4.1 35 4-41 24-58 (158)
210 1mio_A Nitrogenase molybdenum 39.0 1.3E+02 0.0044 30.7 9.8 34 92-134 447-480 (533)
211 2ew2_A 2-dehydropantoate 2-red 38.8 23 0.00078 33.1 3.9 35 1-40 1-35 (316)
212 3gl9_A Response regulator; bet 38.7 41 0.0014 25.9 4.9 33 106-138 45-86 (122)
213 2l82_A Designed protein OR32; 38.4 53 0.0018 25.0 5.0 35 310-348 2-36 (162)
214 3ug7_A Arsenical pump-driving 38.1 1E+02 0.0036 29.3 8.6 39 4-42 26-65 (349)
215 1hdo_A Biliverdin IX beta redu 38.1 53 0.0018 27.9 6.0 37 1-41 1-37 (206)
216 2g1u_A Hypothetical protein TM 37.4 43 0.0015 27.5 5.0 34 3-41 19-52 (155)
217 3r3s_A Oxidoreductase; structu 37.3 38 0.0013 31.4 5.2 34 4-40 49-82 (294)
218 1ehi_A LMDDL2, D-alanine:D-lac 37.3 27 0.00091 34.0 4.2 40 1-40 1-45 (377)
219 1rw7_A YDR533CP; alpha-beta sa 37.0 61 0.0021 29.1 6.4 41 1-41 1-52 (243)
220 3h75_A Periplasmic sugar-bindi 37.0 1E+02 0.0035 28.9 8.4 40 1-40 1-43 (350)
221 3kvo_A Hydroxysteroid dehydrog 36.8 1.6E+02 0.0056 27.8 9.8 35 4-41 45-79 (346)
222 3ors_A N5-carboxyaminoimidazol 36.8 1.9E+02 0.0063 24.2 12.0 140 310-474 4-154 (163)
223 3eag_A UDP-N-acetylmuramate:L- 36.6 38 0.0013 32.0 5.1 35 3-41 4-38 (326)
224 4e3z_A Putative oxidoreductase 36.6 38 0.0013 30.8 5.0 37 1-40 23-59 (272)
225 3uug_A Multiple sugar-binding 36.3 2.5E+02 0.0087 25.6 12.7 32 106-137 58-93 (330)
226 1jkx_A GART;, phosphoribosylgl 36.3 2.2E+02 0.0074 24.9 10.5 101 4-137 1-110 (212)
227 4g9b_A Beta-PGM, beta-phosphog 36.2 1.6E+02 0.0054 25.9 9.2 96 20-137 100-195 (243)
228 3cx3_A Lipoprotein; zinc-bindi 36.2 83 0.0028 29.0 7.3 42 92-136 214-257 (284)
229 2qs7_A Uncharacterized protein 36.1 47 0.0016 27.1 5.0 44 4-47 8-52 (144)
230 3lte_A Response regulator; str 36.1 1.4E+02 0.0049 22.7 10.4 32 3-38 6-37 (132)
231 4gkb_A 3-oxoacyl-[acyl-carrier 35.9 1.1E+02 0.0038 27.7 8.0 37 3-42 6-42 (258)
232 2r85_A PURP protein PF1517; AT 35.8 33 0.0011 32.3 4.5 35 2-42 1-35 (334)
233 3to5_A CHEY homolog; alpha(5)b 35.7 35 0.0012 27.5 4.0 33 106-138 56-97 (134)
234 4e12_A Diketoreductase; oxidor 35.5 32 0.0011 31.7 4.3 34 1-39 2-35 (283)
235 3ijr_A Oxidoreductase, short c 35.4 1.3E+02 0.0045 27.5 8.7 34 5-41 48-81 (291)
236 3tox_A Short chain dehydrogena 35.4 1.7E+02 0.0057 26.6 9.3 34 4-40 8-41 (280)
237 1xrs_B D-lysine 5,6-aminomutas 35.4 77 0.0026 28.9 6.6 109 3-133 120-239 (262)
238 3grp_A 3-oxoacyl-(acyl carrier 35.3 1.4E+02 0.0049 26.8 8.8 34 4-40 27-60 (266)
239 1pq4_A Periplasmic binding pro 35.3 2.2E+02 0.0074 26.2 10.1 80 32-139 190-271 (291)
240 1dhr_A Dihydropteridine reduct 35.2 38 0.0013 30.2 4.7 35 3-40 6-40 (241)
241 2zts_A Putative uncharacterize 35.0 2.3E+02 0.0077 24.7 10.2 42 6-47 33-75 (251)
242 2q2v_A Beta-D-hydroxybutyrate 34.8 2.4E+02 0.0081 25.0 10.2 35 5-42 5-39 (255)
243 1p9o_A Phosphopantothenoylcyst 34.7 27 0.00091 33.0 3.5 24 19-42 67-90 (313)
244 4huj_A Uncharacterized protein 34.4 20 0.00069 31.7 2.6 35 1-40 21-55 (220)
245 3sx2_A Putative 3-ketoacyl-(ac 34.4 58 0.002 29.7 5.9 34 4-40 13-46 (278)
246 2gwr_A DNA-binding response re 34.2 1.5E+02 0.0052 25.9 8.6 31 4-38 6-36 (238)
247 4iiu_A 3-oxoacyl-[acyl-carrier 34.2 85 0.0029 28.3 7.0 35 4-41 26-60 (267)
248 3ezl_A Acetoacetyl-COA reducta 34.1 1.3E+02 0.0044 26.7 8.2 34 3-39 12-45 (256)
249 3oig_A Enoyl-[acyl-carrier-pro 34.0 1.9E+02 0.0065 25.8 9.4 36 4-40 7-42 (266)
250 3trh_A Phosphoribosylaminoimid 33.9 69 0.0024 27.0 5.5 41 1-42 4-46 (169)
251 3dhn_A NAD-dependent epimerase 33.9 30 0.001 30.3 3.7 37 1-41 1-38 (227)
252 3da8_A Probable 5'-phosphoribo 33.7 1E+02 0.0035 27.1 7.0 107 3-137 12-120 (215)
253 2pju_A Propionate catabolism o 33.7 40 0.0014 30.1 4.4 34 381-415 59-92 (225)
254 3hwr_A 2-dehydropantoate 2-red 33.5 40 0.0014 31.8 4.7 41 3-48 19-59 (318)
255 3pnx_A Putative sulfurtransfer 33.3 68 0.0023 26.8 5.5 48 1-48 2-50 (160)
256 3l49_A ABC sugar (ribose) tran 33.2 2.6E+02 0.009 24.9 11.8 31 106-136 60-94 (291)
257 3fwz_A Inner membrane protein 33.2 28 0.00094 28.1 3.1 34 3-41 7-40 (140)
258 4egb_A DTDP-glucose 4,6-dehydr 33.1 1.3E+02 0.0044 28.1 8.4 32 4-39 25-58 (346)
259 2q6t_A DNAB replication FORK h 33.0 66 0.0023 31.9 6.5 41 6-46 203-244 (444)
260 3e8x_A Putative NAD-dependent 32.9 1.3E+02 0.0044 26.3 7.9 36 3-42 21-56 (236)
261 3qlj_A Short chain dehydrogena 32.8 1.9E+02 0.0066 26.8 9.5 33 4-39 27-59 (322)
262 1pno_A NAD(P) transhydrogenase 32.6 45 0.0015 28.0 4.0 39 3-41 23-64 (180)
263 2gk4_A Conserved hypothetical 32.4 32 0.0011 30.9 3.5 23 19-41 31-53 (232)
264 3dfz_A SIRC, precorrin-2 dehyd 32.3 2.6E+02 0.009 24.6 13.5 142 309-473 32-185 (223)
265 1d4o_A NADP(H) transhydrogenas 32.2 45 0.0016 28.0 4.0 39 3-41 22-63 (184)
266 2a5l_A Trp repressor binding p 32.2 53 0.0018 28.1 5.0 40 1-40 3-43 (200)
267 2w36_A Endonuclease V; hypoxan 31.6 33 0.0011 30.5 3.4 31 106-136 102-139 (225)
268 1q57_A DNA primase/helicase; d 31.6 73 0.0025 32.1 6.6 41 6-46 245-286 (503)
269 3kjh_A CO dehydrogenase/acetyl 31.6 32 0.0011 30.6 3.6 38 5-42 2-39 (254)
270 1e4e_A Vancomycin/teicoplanin 31.5 24 0.00082 33.6 2.8 39 1-40 1-44 (343)
271 3uf0_A Short-chain dehydrogena 31.5 2.3E+02 0.008 25.5 9.6 34 4-40 31-64 (273)
272 2zyd_A 6-phosphogluconate dehy 31.4 25 0.00084 35.6 2.9 35 1-40 13-47 (480)
273 3qvl_A Putative hydantoin race 31.2 94 0.0032 28.0 6.5 30 106-135 68-98 (245)
274 3gdg_A Probable NADP-dependent 31.0 1.7E+02 0.0057 26.2 8.5 36 4-41 20-56 (267)
275 4dll_A 2-hydroxy-3-oxopropiona 30.9 57 0.0019 30.7 5.3 33 3-40 31-63 (320)
276 3lyu_A Putative hydrogenase; t 30.4 36 0.0012 27.7 3.3 35 4-41 19-53 (142)
277 4e21_A 6-phosphogluconate dehy 30.1 40 0.0014 32.5 4.1 35 1-40 20-54 (358)
278 3o26_A Salutaridine reductase; 29.9 53 0.0018 30.3 4.9 36 3-41 11-46 (311)
279 3l8h_A Putative haloacid dehal 29.9 2.3E+02 0.0078 23.2 10.8 23 20-42 32-54 (179)
280 1qkk_A DCTD, C4-dicarboxylate 29.8 1.2E+02 0.0041 24.1 6.6 51 404-460 74-124 (155)
281 3k96_A Glycerol-3-phosphate de 29.7 36 0.0012 32.7 3.7 33 3-40 29-61 (356)
282 3m9w_A D-xylose-binding peripl 29.6 3.2E+02 0.011 24.7 11.3 32 106-137 57-92 (313)
283 3f6p_A Transcriptional regulat 29.6 73 0.0025 24.2 5.0 33 106-138 45-83 (120)
284 1qyd_A Pinoresinol-lariciresin 29.5 37 0.0012 31.5 3.7 37 1-41 1-38 (313)
285 2fsv_C NAD(P) transhydrogenase 29.4 53 0.0018 28.2 4.0 39 3-41 46-87 (203)
286 3obb_A Probable 3-hydroxyisobu 29.4 57 0.002 30.4 4.9 31 4-39 4-34 (300)
287 4g6h_A Rotenone-insensitive NA 29.0 27 0.00093 35.4 2.8 34 3-41 42-75 (502)
288 4e5s_A MCCFLIKE protein (BA_56 29.0 74 0.0025 30.2 5.6 73 322-413 62-136 (331)
289 1j8m_F SRP54, signal recogniti 29.0 2.1E+02 0.0071 26.5 8.8 38 6-43 101-138 (297)
290 1djl_A Transhydrogenase DIII; 29.0 54 0.0018 28.3 4.0 39 3-41 45-86 (207)
291 1qyc_A Phenylcoumaran benzylic 28.9 38 0.0013 31.3 3.7 37 1-41 1-38 (308)
292 3ty2_A 5'-nucleotidase SURE; s 28.8 60 0.002 29.6 4.7 113 3-137 11-136 (261)
293 3icc_A Putative 3-oxoacyl-(acy 28.5 99 0.0034 27.5 6.4 36 3-41 6-41 (255)
294 2hmt_A YUAA protein; RCK, KTN, 28.5 37 0.0013 27.0 3.1 33 3-40 6-38 (144)
295 3a28_C L-2.3-butanediol dehydr 28.3 92 0.0031 27.9 6.1 34 5-41 3-36 (258)
296 2ehd_A Oxidoreductase, oxidore 28.3 73 0.0025 28.0 5.3 37 1-40 1-38 (234)
297 4hb9_A Similarities with proba 28.2 43 0.0015 32.3 4.1 30 4-38 2-31 (412)
298 2fb6_A Conserved hypothetical 28.2 53 0.0018 25.8 3.8 42 3-44 7-52 (117)
299 2iz1_A 6-phosphogluconate dehy 28.2 34 0.0012 34.4 3.3 34 1-39 3-36 (474)
300 2dzd_A Pyruvate carboxylase; b 28.1 3.1E+02 0.011 26.9 10.6 34 3-41 6-39 (461)
301 2lnd_A De novo designed protei 28.1 37 0.0013 24.3 2.5 49 403-456 49-100 (112)
302 4ibo_A Gluconate dehydrogenase 28.1 2.1E+02 0.007 25.8 8.6 33 4-39 26-58 (271)
303 2bln_A Protein YFBG; transfera 28.0 2.5E+02 0.0085 26.1 9.1 33 4-41 1-33 (305)
304 3tfo_A Putative 3-oxoacyl-(acy 27.5 75 0.0026 28.8 5.3 37 1-40 1-37 (264)
305 1b93_A Protein (methylglyoxal 27.2 1.3E+02 0.0043 24.9 6.0 88 13-134 19-119 (152)
306 2i87_A D-alanine-D-alanine lig 27.2 26 0.00088 33.8 2.1 40 1-40 1-44 (364)
307 2q5c_A NTRC family transcripti 27.0 32 0.0011 29.9 2.5 32 383-415 49-80 (196)
308 3giu_A Pyrrolidone-carboxylate 27.0 85 0.0029 27.7 5.3 29 1-29 1-31 (215)
309 1f0y_A HCDH, L-3-hydroxyacyl-C 27.0 43 0.0015 31.2 3.6 32 4-40 16-47 (302)
310 3lp6_A Phosphoribosylaminoimid 26.7 2.9E+02 0.0099 23.3 10.9 138 310-474 8-156 (174)
311 3ego_A Probable 2-dehydropanto 26.7 61 0.0021 30.3 4.6 41 3-49 2-43 (307)
312 3l7i_A Teichoic acid biosynthe 26.7 1.1E+02 0.0037 32.6 7.1 110 373-497 605-719 (729)
313 1meo_A Phosophoribosylglycinam 26.7 3.2E+02 0.011 23.8 10.8 107 4-137 1-110 (209)
314 2dpo_A L-gulonate 3-dehydrogen 26.6 44 0.0015 31.6 3.6 34 2-40 5-38 (319)
315 2wm3_A NMRA-like family domain 26.6 42 0.0015 30.9 3.5 38 1-42 2-41 (299)
316 3dtt_A NADP oxidoreductase; st 26.4 58 0.002 29.2 4.3 33 3-40 19-51 (245)
317 1ulz_A Pyruvate carboxylase N- 26.4 2E+02 0.0067 28.3 8.7 33 4-41 3-35 (451)
318 2d1p_A TUSD, hypothetical UPF0 26.3 1.1E+02 0.0036 24.9 5.4 40 4-43 13-56 (140)
319 1eiw_A Hypothetical protein MT 26.2 69 0.0024 24.9 4.0 61 384-455 39-108 (111)
320 3goc_A Endonuclease V; alpha-b 26.1 80 0.0027 28.3 4.9 30 106-135 106-142 (237)
321 2bi7_A UDP-galactopyranose mut 26.1 77 0.0026 30.6 5.4 35 1-40 1-35 (384)
322 2z1m_A GDP-D-mannose dehydrata 26.0 63 0.0021 30.2 4.7 37 1-41 1-37 (345)
323 2d1p_B TUSC, hypothetical UPF0 26.0 88 0.003 24.4 4.8 36 8-43 7-44 (119)
324 2vpq_A Acetyl-COA carboxylase; 25.9 1.6E+02 0.0054 29.0 7.9 33 4-41 2-34 (451)
325 4h1h_A LMO1638 protein; MCCF-l 25.9 88 0.003 29.6 5.6 63 322-403 62-124 (327)
326 1iow_A DD-ligase, DDLB, D-ALA\ 25.9 85 0.0029 28.8 5.5 39 2-40 1-43 (306)
327 2r6a_A DNAB helicase, replicat 25.9 1.4E+02 0.0047 29.6 7.3 41 6-46 206-247 (454)
328 2w70_A Biotin carboxylase; lig 25.8 1.6E+02 0.0055 28.9 7.8 32 4-40 3-34 (449)
329 3d3j_A Enhancer of mRNA-decapp 25.6 63 0.0022 30.3 4.4 34 4-40 133-168 (306)
330 3gg2_A Sugar dehydrogenase, UD 25.5 52 0.0018 32.8 4.1 34 1-40 1-34 (450)
331 3u0b_A Oxidoreductase, short c 25.3 2.4E+02 0.0083 27.9 9.0 36 4-42 213-248 (454)
332 3m1a_A Putative dehydrogenase; 25.2 77 0.0026 28.8 5.0 38 1-41 1-39 (281)
333 2nwq_A Probable short-chain de 25.2 63 0.0022 29.5 4.4 33 5-40 22-54 (272)
334 2xw6_A MGS, methylglyoxal synt 25.0 95 0.0033 25.1 4.8 96 4-135 4-112 (134)
335 3hyw_A Sulfide-quinone reducta 25.0 45 0.0015 32.9 3.5 35 1-41 1-37 (430)
336 1z82_A Glycerol-3-phosphate de 25.0 56 0.0019 30.9 4.1 33 3-40 14-46 (335)
337 3enk_A UDP-glucose 4-epimerase 24.9 78 0.0027 29.6 5.1 37 1-40 2-38 (341)
338 1jx7_A Hypothetical protein YC 24.9 57 0.0019 25.1 3.4 33 14-46 15-49 (117)
339 3l77_A Short-chain alcohol deh 24.9 77 0.0026 27.9 4.8 34 4-40 2-35 (235)
340 1evy_A Glycerol-3-phosphate de 24.9 27 0.00093 33.6 1.8 31 5-40 17-47 (366)
341 1uls_A Putative 3-oxoacyl-acyl 24.8 83 0.0028 28.0 5.0 34 4-40 5-38 (245)
342 3qha_A Putative oxidoreductase 24.8 37 0.0013 31.6 2.7 33 3-40 15-47 (296)
343 3rkr_A Short chain oxidoreduct 24.7 85 0.0029 28.2 5.2 34 4-40 29-62 (262)
344 3doj_A AT3G25530, dehydrogenas 24.7 63 0.0022 30.2 4.3 33 3-40 21-53 (310)
345 2i2c_A Probable inorganic poly 24.6 32 0.0011 31.6 2.2 52 386-457 36-93 (272)
346 2j37_W Signal recognition part 24.5 1.9E+02 0.0065 29.2 8.0 40 5-44 103-142 (504)
347 2hy5_A Putative sulfurtransfer 24.5 47 0.0016 26.5 2.9 40 5-44 2-45 (130)
348 3i6i_A Putative leucoanthocyan 24.5 72 0.0025 30.1 4.8 98 1-134 8-117 (346)
349 3pdi_B Nitrogenase MOFE cofact 24.3 58 0.002 32.6 4.2 34 93-135 367-400 (458)
350 3dfu_A Uncharacterized protein 24.3 49 0.0017 29.7 3.2 33 3-40 6-38 (232)
351 3ib6_A Uncharacterized protein 24.2 3.1E+02 0.011 22.8 11.6 103 20-137 39-144 (189)
352 3h7a_A Short chain dehydrogena 24.2 81 0.0028 28.2 4.9 35 3-40 6-40 (252)
353 4iin_A 3-ketoacyl-acyl carrier 24.1 92 0.0031 28.2 5.3 34 4-40 29-62 (271)
354 3cky_A 2-hydroxymethyl glutara 24.0 81 0.0028 29.0 5.0 34 1-39 1-35 (301)
355 3d3k_A Enhancer of mRNA-decapp 23.9 69 0.0024 29.2 4.2 34 4-40 86-121 (259)
356 1jzt_A Hypothetical 27.5 kDa p 23.8 65 0.0022 29.1 4.0 34 4-40 59-94 (246)
357 1wma_A Carbonyl reductase [NAD 23.7 87 0.003 28.0 5.1 36 2-40 2-38 (276)
358 2nly_A BH1492 protein, diverge 23.6 4E+02 0.014 23.9 9.2 39 90-133 114-155 (245)
359 1ks9_A KPA reductase;, 2-dehyd 23.6 66 0.0022 29.4 4.2 31 5-40 2-32 (291)
360 2vrn_A Protease I, DR1199; cys 23.4 1.6E+02 0.0056 24.7 6.5 40 1-41 7-46 (190)
361 3bul_A Methionine synthase; tr 23.1 1E+02 0.0034 31.8 5.7 44 3-46 98-141 (579)
362 3zv4_A CIS-2,3-dihydrobiphenyl 23.0 92 0.0031 28.4 5.1 37 1-40 1-38 (281)
363 3g0o_A 3-hydroxyisobutyrate de 22.8 52 0.0018 30.6 3.3 32 3-39 7-38 (303)
364 3dqz_A Alpha-hydroxynitrIle ly 22.7 48 0.0016 29.0 2.9 41 1-41 1-41 (258)
365 2raf_A Putative dinucleotide-b 22.7 76 0.0026 27.6 4.2 32 3-39 19-50 (209)
366 2an1_A Putative kinase; struct 22.5 46 0.0016 30.8 2.9 27 386-412 64-94 (292)
367 4dqx_A Probable oxidoreductase 22.4 97 0.0033 28.2 5.1 34 4-40 27-60 (277)
368 2o8n_A APOA-I binding protein; 22.3 82 0.0028 28.8 4.4 34 4-40 80-115 (265)
369 2ywx_A Phosphoribosylaminoimid 22.2 3.4E+02 0.011 22.5 9.6 131 312-474 2-144 (157)
370 3c85_A Putative glutathione-re 22.2 56 0.0019 27.5 3.2 34 3-41 39-73 (183)
371 3p9x_A Phosphoribosylglycinami 22.1 1.2E+02 0.004 26.7 5.2 47 91-137 14-61 (211)
372 3f67_A Putative dienelactone h 22.1 99 0.0034 26.6 5.0 35 5-39 33-67 (241)
373 3n7t_A Macrophage binding prot 22.1 1.8E+02 0.0061 26.1 6.7 39 3-41 9-58 (247)
374 4eso_A Putative oxidoreductase 21.9 98 0.0034 27.7 4.9 34 4-40 8-41 (255)
375 3ip0_A 2-amino-4-hydroxy-6-hyd 21.7 1E+02 0.0034 25.7 4.4 28 311-338 2-29 (158)
376 3uhj_A Probable glycerol dehyd 21.7 2.3E+02 0.0078 27.4 7.8 92 22-137 43-139 (387)
377 2ixd_A LMBE-related protein; h 21.7 79 0.0027 28.4 4.1 37 1-38 1-38 (242)
378 3ppi_A 3-hydroxyacyl-COA dehyd 21.7 1.1E+02 0.0036 27.8 5.2 34 4-40 30-63 (281)
379 3gk3_A Acetoacetyl-COA reducta 21.7 96 0.0033 28.0 4.9 35 3-40 24-58 (269)
380 4ehi_A Bifunctional purine bio 21.6 83 0.0028 31.7 4.5 41 15-66 32-72 (534)
381 3ga2_A Endonuclease V; alpha-b 21.5 84 0.0029 28.3 4.1 30 106-135 108-144 (246)
382 1zl0_A Hypothetical protein PA 21.5 1.3E+02 0.0043 28.3 5.6 76 320-414 62-139 (311)
383 3qiv_A Short-chain dehydrogena 21.4 1.1E+02 0.0036 27.3 5.1 34 4-40 9-42 (253)
384 3kcn_A Adenylate cyclase homol 21.4 1.5E+02 0.005 23.5 5.5 50 404-460 75-126 (151)
385 3g79_A NDP-N-acetyl-D-galactos 21.4 99 0.0034 31.1 5.1 36 2-42 17-54 (478)
386 3lk7_A UDP-N-acetylmuramoylala 21.3 98 0.0034 30.7 5.2 33 3-40 9-41 (451)
387 3i12_A D-alanine-D-alanine lig 21.3 48 0.0016 31.9 2.8 41 1-41 1-45 (364)
388 3tqr_A Phosphoribosylglycinami 21.1 1.2E+02 0.004 26.8 5.0 45 92-136 18-62 (215)
389 2gdz_A NAD+-dependent 15-hydro 20.9 1.2E+02 0.0041 27.2 5.4 33 5-40 8-40 (267)
390 3alj_A 2-methyl-3-hydroxypyrid 20.8 74 0.0025 30.5 4.1 35 1-40 9-43 (379)
391 4h15_A Short chain alcohol deh 20.7 1.2E+02 0.0042 27.4 5.4 35 3-40 10-44 (261)
392 3s2u_A UDP-N-acetylglucosamine 20.7 2.5E+02 0.0085 26.6 7.9 26 383-410 92-120 (365)
393 4eg0_A D-alanine--D-alanine li 20.7 1.2E+02 0.0041 28.2 5.5 39 3-41 13-55 (317)
394 1x1t_A D(-)-3-hydroxybutyrate 20.6 1.1E+02 0.0039 27.3 5.1 34 4-40 4-37 (260)
395 2qx0_A 7,8-dihydro-6-hydroxyme 20.6 1.3E+02 0.0043 25.1 4.8 28 311-338 3-30 (159)
396 3t4x_A Oxidoreductase, short c 20.5 1.2E+02 0.0041 27.3 5.3 34 4-40 10-43 (267)
397 3mjf_A Phosphoribosylamine--gl 20.5 1.1E+02 0.0038 30.1 5.4 35 3-42 3-37 (431)
398 3imf_A Short chain dehydrogena 20.5 1.1E+02 0.0038 27.3 5.0 34 4-40 6-39 (257)
399 2r6j_A Eugenol synthase 1; phe 20.5 75 0.0026 29.4 3.9 33 5-41 13-45 (318)
400 1f9y_A HPPK, protein (6-hydrox 20.5 1.1E+02 0.0038 25.5 4.4 28 311-338 2-29 (158)
401 1yt5_A Inorganic polyphosphate 20.4 41 0.0014 30.7 1.9 52 386-457 42-96 (258)
402 3qsg_A NAD-binding phosphogluc 20.4 60 0.0021 30.4 3.2 33 3-40 24-57 (312)
403 1vmd_A MGS, methylglyoxal synt 20.4 1.5E+02 0.0052 25.2 5.3 88 13-134 35-135 (178)
404 1e7w_A Pteridine reductase; di 20.3 1.1E+02 0.0038 28.0 5.0 32 4-38 9-40 (291)
405 2prs_A High-affinity zinc upta 20.3 1.2E+02 0.004 28.0 5.1 40 93-135 212-253 (284)
406 1ooe_A Dihydropteridine reduct 20.3 1.1E+02 0.0036 27.0 4.7 36 1-40 1-36 (236)
407 1u7z_A Coenzyme A biosynthesis 20.1 74 0.0025 28.3 3.5 23 19-41 36-58 (226)
408 1zi8_A Carboxymethylenebutenol 20.1 1.2E+02 0.0041 25.9 5.1 36 5-40 29-64 (236)
409 3sr3_A Microcin immunity prote 20.1 1E+02 0.0035 29.3 4.8 73 322-413 63-137 (336)
410 1xfi_A Unknown protein; struct 20.1 98 0.0034 29.8 4.6 38 4-41 213-251 (367)
411 3l6u_A ABC-type sugar transpor 20.1 4.6E+02 0.016 23.2 10.8 31 106-136 63-97 (293)
412 4gwg_A 6-phosphogluconate dehy 20.0 60 0.0021 32.7 3.2 35 1-40 2-36 (484)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=7e-68 Score=542.96 Aligned_cols=431 Identities=26% Similarity=0.473 Sum_probs=348.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCC--CEEEEEeCCcChhhHHHhhhcCCCCCCCeEEEecCCCCCCCC-CcccHH
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHG--FRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWE-DRNDLG 79 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rG--H~Vt~~~~~~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~ 79 (524)
+.||+++|+|++||++|++.||+.|+++| |.|||++++.+...+.+.. ....++++|+.+|++++++. ...+..
T Consensus 13 ~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~---~~~~~~i~~~~ipdglp~~~~~~~~~~ 89 (454)
T 3hbf_A 13 LLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRS---NEFLPNIKYYNVHDGLPKGYVSSGNPR 89 (454)
T ss_dssp CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSS---SCCCTTEEEEECCCCCCTTCCCCSCTT
T ss_pred CCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhccc---ccCCCCceEEecCCCCCCCccccCChH
Confidence 57999999999999999999999999999 9999999976555443221 01135799999999888762 222333
Q ss_pred HHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEECCCchhHHHHHHHcCCceEEEccchHHHHHHHhhcccccccCCCCC
Q 009851 80 KLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIIDS 159 (524)
Q Consensus 80 ~~~~~~~~~~~~~~~~ll~~l~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (524)
..+..+...+.+.+++.++++..+.+.++||||+|.+++|+..+|+++|||++.+++++++.+..+.+++.+........
T Consensus 90 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~~~~~ 169 (454)
T 3hbf_A 90 EPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTGSKE 169 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhcCCCc
Confidence 44444445555556666655432212589999999999999999999999999999999998888887655433210000
Q ss_pred CCCCccccCCCCCCCCCCccccccccchhhhheehhhccCCCCCCccccccccCCCCCCCcccccccccCCCchhhHHHH
Q 009851 160 HGMIPCHVIPYFPPANFNFDACHSRSLLYATVIFFVLYSTSGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFFD 239 (524)
Q Consensus 160 ~~~~~~~~~~y~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~ 239 (524)
. ........+||++++...+++ .++.. .....+.+
T Consensus 170 ------------------------------------------~-~~~~~~~~iPg~p~~~~~dlp-~~~~~-~~~~~~~~ 204 (454)
T 3hbf_A 170 ------------------------------------------V-HDVKSIDVLPGFPELKASDLP-EGVIK-DIDVPFAT 204 (454)
T ss_dssp ------------------------------------------H-TTSSCBCCSTTSCCBCGGGSC-TTSSS-CTTSHHHH
T ss_pred ------------------------------------------c-ccccccccCCCCCCcChhhCc-hhhcc-CCchHHHH
Confidence 0 001123347888888888888 44432 33445667
Q ss_pred HHHHHHHhcccccEEEEcCCccccccc----ccCCCcccccccccccCCCCCCCCCCccCcchhhHhhhcCCCCceEEEe
Q 009851 240 LLERNTRAMIAVNFHFCNSTYELESEA----FTTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVS 315 (524)
Q Consensus 240 ~~~~~~~~~~~~~~~l~ns~~~le~~~----~~~~~~v~~VGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs 315 (524)
.+.+..+.+.+++.+++||+++||++. .+..|++++|||++...... ..+.++++.+||+.++++++||||
T Consensus 205 ~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~~~~v~~vGPl~~~~~~~-----~~~~~~~~~~wLd~~~~~~vVyvs 279 (454)
T 3hbf_A 205 MLHKMGLELPRANAVAINSFATIHPLIENELNSKFKLLLNVGPFNLTTPQR-----KVSDEHGCLEWLDQHENSSVVYIS 279 (454)
T ss_dssp HHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTTSSCEEECCCHHHHSCCS-----CCCCTTCHHHHHHTSCTTCEEEEE
T ss_pred HHHHHHHhhccCCEEEECChhHhCHHHHHHHHhcCCCEEEECCcccccccc-----cccchHHHHHHHhcCCCCceEEEe
Confidence 777777888899999999999999863 34568999999998754321 123467899999998889999999
Q ss_pred ecCCCCCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeeEEeccChhhhhcCCCcceEEecCCh
Q 009851 316 FGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGW 395 (524)
Q Consensus 316 ~GS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~vpq~~lL~~~~v~~~ItHgG~ 395 (524)
|||....+.+++.+++.+|+.++++|||+++.+ ....+|+++.++.++|+++++|+||.+||+|+++++|||||||
T Consensus 280 fGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~----~~~~lp~~~~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~ 355 (454)
T 3hbf_A 280 FGSVVTPPPHELTALAESLEECGFPFIWSFRGD----PKEKLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGW 355 (454)
T ss_dssp CCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSC----HHHHSCTTHHHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCH
T ss_pred cCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCc----chhcCCHhHHhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCc
Confidence 999998899999999999999999999999765 2345789999999999999999999999999999999999999
Q ss_pred hhHHHHHHcCCceeccCcccchhhhHHhhccccceeeEEecCCCCCCCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHH
Q 009851 396 NSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQ---DFKARALELKEKAM 472 (524)
Q Consensus 396 gs~~Eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~~~~~~~~~~t~~~l~~ai~~~l~~~---~~r~~a~~l~~~~~ 472 (524)
||++|++++|||||++|+++||+.||+++++.+|+|+.++. ..+++++|.++|+++|+|+ +||+||++++++++
T Consensus 356 ~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~---~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~ 432 (454)
T 3hbf_A 356 NSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDN---GVLTKESIKKALELTMSSEKGGIMRQKIVKLKESAF 432 (454)
T ss_dssp HHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECGG---GSCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEecC---CCCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999885699999975 5699999999999999987 79999999999999
Q ss_pred hhhhcCCCcHHHHHHHHHHHH
Q 009851 473 SSVREGGSSYKTFQNFLQWTM 493 (524)
Q Consensus 473 ~~~~~~g~~~~~~~~~~~~i~ 493 (524)
+++++|||++++++++++.|.
T Consensus 433 ~a~~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 433 KAVEQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp HHTSTTSHHHHHHHHHHHHHT
T ss_pred HhhccCCCHHHHHHHHHHHHh
Confidence 999999999999999999863
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=4.7e-63 Score=517.29 Aligned_cols=451 Identities=33% Similarity=0.661 Sum_probs=333.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcChhhHHHhhhcCCCC-CCCeEEEecCCCCCCCC----Cc
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYL-GEQIHLVSIPDGMEPWE----DR 75 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~-~~~i~~~~~~~~~~~~~----~~ 75 (524)
|++.||+++|+|++||++|++.||++|++|||+|||++++.+...+.+........ .++++|+.++++++..+ ..
T Consensus 6 ~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~lp~~~~~~~~~ 85 (482)
T 2pq6_A 6 NRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPMEGDGDVS 85 (482)
T ss_dssp --CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC---------
T ss_pred CCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCCCCCCcccccCcc
Confidence 34679999999999999999999999999999999999988766654321000000 13899999998766521 12
Q ss_pred ccHHHHHHHHHHhccHHHHHHHHHHhcC-CCCCccEEEECCCchhHHHHHHHcCCceEEEccchHHHHHHHhhccccccc
Q 009851 76 NDLGKLIEKCLQVMPGKLEELIEEINSR-EDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDD 154 (524)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~-~~~~~D~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~ 154 (524)
.+...++..+...+.+.++++++.+..+ ++.++||||+|.+++|+..+|+++|||++.++++++.....+.+++...
T Consensus 86 ~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~-- 163 (482)
T 2pq6_A 86 QDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFV-- 163 (482)
T ss_dssp CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHH--
T ss_pred hhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHHH--
Confidence 3455566666577888999999987642 0158999999999999999999999999999999887666554433221
Q ss_pred CCCCCCCCCccccCCCCCCCCCCccccccccchhhhheehhhccCCCCCCccccccccCCCCCCCcccccccccCCCchh
Q 009851 155 GIIDSHGMIPCHVIPYFPPANFNFDACHSRSLLYATVIFFVLYSTSGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQ 234 (524)
Q Consensus 155 ~~~~~~~~~~~~~~~y~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~ 234 (524)
...|+|.....+.. .++. ......+++++.+...+++ .++......
T Consensus 164 ------------~~~~~p~~~~~~~~-------------------~~~~--~~~~~~~~~~~~~~~~~l~-~~~~~~~~~ 209 (482)
T 2pq6_A 164 ------------ERGIIPFKDESYLT-------------------NGCL--ETKVDWIPGLKNFRLKDIV-DFIRTTNPN 209 (482)
T ss_dssp ------------HTTCSSCSSGGGGT-------------------SSGG--GCBCCSSTTCCSCBGGGSC-GGGCCSCTT
T ss_pred ------------hcCCCCCccccccc-------------------cccc--cCccccCCCCCCCchHHCc-hhhccCCcc
Confidence 12334422110000 0000 0011123555555555555 333322223
Q ss_pred hHHHHHHHHHHHhcccccEEEEcCCccccccc----ccCCCccccccccccc-CCCC------CCCCCCccCcchhhHhh
Q 009851 235 KIFFDLLERNTRAMIAVNFHFCNSTYELESEA----FTTFPELLPIGPLLAS-NRLG------NTAGYFWCEDSNCLKWL 303 (524)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~----~~~~~~v~~VGp~~~~-~~~~------~~~~~~~~~~~~l~~~l 303 (524)
..+.+.+.+..+...+++++|+||+++||++. ++..+++++|||++.. .... ......++.+.++.+||
T Consensus 210 ~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~~~~~~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wl 289 (482)
T 2pq6_A 210 DIMLEFFIEVADRVNKDTTILLNTFNELESDVINALSSTIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWL 289 (482)
T ss_dssp CHHHHHHHHHHHTCCTTCCEEESSCGGGGHHHHHHHHTTCTTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHH
T ss_pred cHHHHHHHHHHHhhccCCEEEEcChHHHhHHHHHHHHHhCCcEEEEcCCcccccccccccccccccccccccchHHHHHH
Confidence 33444455555667889999999999999862 3334899999999864 2110 00011234566799999
Q ss_pred hcCCCCceEEEeecCCCCCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeeEEeccChhhhhcC
Q 009851 304 DQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNH 383 (524)
Q Consensus 304 ~~~~~~~vV~vs~GS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~vpq~~lL~~ 383 (524)
+.++++++|||||||....+.+.+.+++++|+.++++|||+++.+...+....+|+++.++.++|+++++|+||.++|+|
T Consensus 290 d~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h 369 (482)
T 2pq6_A 290 ESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDKVLNH 369 (482)
T ss_dssp TTSCTTCEEEEECCSSSCCCHHHHHHHHHHHHHTTCEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCHHHHHTS
T ss_pred hcCCCCceEEEecCCcccCCHHHHHHHHHHHHhcCCcEEEEEcCCccccccccCcHhHHHhcCCCEEEEeecCHHHHhcC
Confidence 99877899999999998888888999999999999999999975421111123788998889999999999999999999
Q ss_pred CCcceEEecCChhhHHHHHHcCCceeccCcccchhhhHHhhc-cccceeeEEecCCCCCCCHHHHHHHHHHHhcCH---H
Q 009851 384 PSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYIC-DFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQ---D 459 (524)
Q Consensus 384 ~~v~~~ItHgG~gs~~Eal~~GvP~v~~P~~~DQ~~na~rv~-~~lG~G~~~~~~~~~~~t~~~l~~ai~~~l~~~---~ 459 (524)
+++++||||||+||++||+++|||||++|++.||+.||++++ + +|+|+.++ ..+++++|.++|+++|+|+ +
T Consensus 370 ~~~~~~vth~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~-~G~g~~l~----~~~~~~~l~~~i~~ll~~~~~~~ 444 (482)
T 2pq6_A 370 PSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNE-WEIGMEID----TNVKREELAKLINEVIAGDKGKK 444 (482)
T ss_dssp TTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHT-SCCEEECC----SSCCHHHHHHHHHHHHTSHHHHH
T ss_pred CCCCEEEecCCcchHHHHHHcCCCEEecCcccchHHHHHHHHHH-hCEEEEEC----CCCCHHHHHHHHHHHHcCCcHHH
Confidence 999999999999999999999999999999999999999997 5 69999985 3589999999999999998 6
Q ss_pred HHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHH
Q 009851 460 FKARALELKEKAMSSVREGGSSYKTFQNFLQWT 492 (524)
Q Consensus 460 ~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~i 492 (524)
||+||+++++++++++.+|||++++++++++.+
T Consensus 445 ~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~ 477 (482)
T 2pq6_A 445 MKQKAMELKKKAEENTRPGGCSYMNLNKVIKDV 477 (482)
T ss_dssp HHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Confidence 999999999999999999999999999999876
No 3
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=1.2e-60 Score=497.38 Aligned_cols=436 Identities=30% Similarity=0.487 Sum_probs=326.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhC-CCEEEEEeCCc--ChhhHHHhhhcCCCCCCCeEEEecCCCCCCC-CCcccH
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKH-GFRVTFVNTDY--NHKRVVESLQGKNYLGEQIHLVSIPDGMEPW-EDRNDL 78 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~r-GH~Vt~~~~~~--~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~ 78 (524)
+.||+++|+|++||++|++.||++|++| ||+|||+++.. ....+.+... ....+++|+.++.+..+. ....+.
T Consensus 6 ~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~---~~~~~i~~~~l~~~~~~~~~~~~~~ 82 (480)
T 2vch_A 6 TPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLD---SLPSSISSVFLPPVDLTDLSSSTRI 82 (480)
T ss_dssp CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC----CCTTEEEEECCCCCCTTSCTTCCH
T ss_pred CcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhcc---ccCCCceEEEcCCCCCCCCCCchhH
Confidence 4799999999999999999999999998 99999999987 3444443210 012489999998653211 111234
Q ss_pred HHHHHHHHHhccHHHHHHHHHHhcCCCCCc-cEEEECCCchhHHHHHHHcCCceEEEccchHHHHHHHhhcccccccCCC
Q 009851 79 GKLIEKCLQVMPGKLEELIEEINSREDEKI-DCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGII 157 (524)
Q Consensus 79 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~-D~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (524)
...+......+.+.++++++.+.. . .++ ||||+|.++.|+..+|+++|||++.++++++.....+.++|.....+..
T Consensus 83 ~~~~~~~~~~~~~~l~~ll~~~~~-~-~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (480)
T 2vch_A 83 ESRISLTVTRSNPELRKVFDSFVE-G-GRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSC 160 (480)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHH-T-TCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHhhhHHHHHHHHHhcc-C-CCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhcCCC
Confidence 343434455667788888887642 1 578 9999999999999999999999999999998877766665543222110
Q ss_pred CCCCCCccccCCCCCCCCCCccccccccchhhhheehhhccCCCCCCccccccccCCCCCCCcccccccccCCCchhhHH
Q 009851 158 DSHGMIPCHVIPYFPPANFNFDACHSRSLLYATVIFFVLYSTSGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIF 237 (524)
Q Consensus 158 ~~~~~~~~~~~~y~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~ 237 (524)
+ +.+. .....+|+++++...+++ ..+.... ...
T Consensus 161 ~-------------------------------------------~~~~-~~~~~~Pg~~p~~~~~l~-~~~~~~~--~~~ 193 (480)
T 2vch_A 161 E-------------------------------------------FREL-TEPLMLPGCVPVAGKDFL-DPAQDRK--DDA 193 (480)
T ss_dssp C-------------------------------------------GGGC-SSCBCCTTCCCBCGGGSC-GGGSCTT--SHH
T ss_pred c-------------------------------------------cccc-CCcccCCCCCCCChHHCc-hhhhcCC--chH
Confidence 0 0000 000122344444444444 2221111 123
Q ss_pred HHHHHHHHHhcccccEEEEcCCcccccccc-------cCCCcccccccccccCCCCCCCCCCccCcchhhHhhhcCCCCc
Q 009851 238 FDLLERNTRAMIAVNFHFCNSTYELESEAF-------TTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSS 310 (524)
Q Consensus 238 ~~~~~~~~~~~~~~~~~l~ns~~~le~~~~-------~~~~~v~~VGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 310 (524)
...+.+....+++++.+++|++.++|+... +..+++++|||++....... ..+.+.++.+||+.+++++
T Consensus 194 ~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~~~~~~~v~~vGpl~~~~~~~~----~~~~~~~~~~wLd~~~~~~ 269 (480)
T 2vch_A 194 YKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDKPPVYPVGPLVNIGKQEA----KQTEESECLKWLDNQPLGS 269 (480)
T ss_dssp HHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCCTTCCCEEECCCCCCCSCSCC---------CHHHHHHHTSCTTC
T ss_pred HHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhcccCCCcEEEEecccccccccc----CccchhHHHHHhcCCCCCc
Confidence 333444455667788899999999997421 11368999999987542110 0135678999999987789
Q ss_pred eEEEeecCCCCCCHHHHHHHHHHHhcCCCCEEEEEcCCCCC-----------CC-CCCCChhhHHhhcCCeeEEe-ccCh
Q 009851 311 VVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITT-----------DA-NDRYPEGFQERVAARGQMIS-WAPQ 377 (524)
Q Consensus 311 vV~vs~GS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~-----------~~-~~~l~~~~~~~~~~n~~v~~-~vpq 377 (524)
+|||||||+...+.+++.+++++|+.++++|||+++..... .. ...+|+++.++..++++++. |+||
T Consensus 270 vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq 349 (480)
T 2vch_A 270 VLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQ 349 (480)
T ss_dssp EEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCH
T ss_pred eEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECCccccccccccccccccchhhhcCHHHHHHhCCCeEEEeCccCH
Confidence 99999999988899999999999999999999999865311 11 13588999988888888886 9999
Q ss_pred hhhhcCCCcceEEecCChhhHHHHHHcCCceeccCcccchhhhHHhh-ccccceeeEEecCCCCCCCHHHHHHHHHHHhc
Q 009851 378 LRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYI-CDFWKVGLKFDRDEGGIITREEIKNKVDQVLG 456 (524)
Q Consensus 378 ~~lL~~~~v~~~ItHgG~gs~~Eal~~GvP~v~~P~~~DQ~~na~rv-~~~lG~G~~~~~~~~~~~t~~~l~~ai~~~l~ 456 (524)
.+||+|++|++|||||||||++||+++|||||++|+++||+.||+++ ++ +|+|+.++..++..+++++|.++|+++|+
T Consensus 350 ~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~-~G~g~~l~~~~~~~~~~~~l~~av~~vl~ 428 (480)
T 2vch_A 350 AQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSED-IRAALRPRAGDDGLVRREEVARVVKGLME 428 (480)
T ss_dssp HHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHT-TCCEECCCCCTTSCCCHHHHHHHHHHHHT
T ss_pred HHHhCCCCcCeEEecccchhHHHHHHcCCCEEeccccccchHHHHHHHHH-hCeEEEeecccCCccCHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999997 56 79999997532236999999999999998
Q ss_pred ---CHHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHH
Q 009851 457 ---NQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWTMNA 495 (524)
Q Consensus 457 ---~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~i~~~ 495 (524)
+++||+||+++++++++++.+||++..+++++++.+...
T Consensus 429 ~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~~~v~~~~~~ 470 (480)
T 2vch_A 429 GEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWKAH 470 (480)
T ss_dssp STHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHh
Confidence 678999999999999999999999999999999999873
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=4e-61 Score=497.91 Aligned_cols=433 Identities=27% Similarity=0.479 Sum_probs=320.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCE--EEEEeCCcChhhHHHhhhcCCCCCCCeEEEecCCCCCCCC-CcccHH
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFR--VTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWE-DRNDLG 79 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~--Vt~~~~~~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~ 79 (524)
+.||+++|+|++||++|++.||++|++|||+ ||+++++.+...+.+.... ....+++|+.+++++++.. ...+..
T Consensus 7 ~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~--~~~~~i~~~~i~~glp~~~~~~~~~~ 84 (456)
T 2c1x_A 7 NPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMH--TMQCNIKSYDISDGVPEGYVFAGRPQ 84 (456)
T ss_dssp CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC---------CTTEEEEECCCCCCTTCCCCCCTT
T ss_pred CCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccc--cCCCceEEEeCCCCCCCcccccCChH
Confidence 5799999999999999999999999999765 5778876544433221100 0124899999998776542 112233
Q ss_pred HHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEECCCchhHHHHHHHcCCceEEEccchHHHHHHHhhccccccc-CCCC
Q 009851 80 KLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDD-GIID 158 (524)
Q Consensus 80 ~~~~~~~~~~~~~~~~ll~~l~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~-~~~~ 158 (524)
..+..+...+.+.++++++.+.++...++||||+|.++.|+..+|+++|||++.++++++..+..+.+.+.+... +...
T Consensus 85 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (456)
T 2c1x_A 85 EDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVSG 164 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHHCSSC
T ss_pred HHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhccCCcc
Confidence 334444444445555555543321116899999999999999999999999999999987766554433322111 1000
Q ss_pred CCCCCccccCCCCCCCCCCccccccccchhhhheehhhccCCCCCCccccccccCCCCCCCcccccccccCCCchhhHHH
Q 009851 159 SHGMIPCHVIPYFPPANFNFDACHSRSLLYATVIFFVLYSTSGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFF 238 (524)
Q Consensus 159 ~~~~~~~~~~~y~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~ 238 (524)
.. .........+|+++.+...+++ ..+........+.
T Consensus 165 ~~------------------------------------------~~~~~~~~~~pg~~~~~~~~lp-~~~~~~~~~~~~~ 201 (456)
T 2c1x_A 165 IQ------------------------------------------GREDELLNFIPGMSKVRFRDLQ-EGIVFGNLNSLFS 201 (456)
T ss_dssp CT------------------------------------------TCTTCBCTTSTTCTTCBGGGSC-TTTSSSCTTSHHH
T ss_pred cc------------------------------------------cccccccccCCCCCcccHHhCc-hhhcCCCcccHHH
Confidence 00 0000111123455444445555 2222222222334
Q ss_pred HHHHHHHHhcccccEEEEcCCccccccc----ccCCCcccccccccccCCCCCCCCCCccCcchhhHhhhcCCCCceEEE
Q 009851 239 DLLERNTRAMIAVNFHFCNSTYELESEA----FTTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYV 314 (524)
Q Consensus 239 ~~~~~~~~~~~~~~~~l~ns~~~le~~~----~~~~~~v~~VGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~v 314 (524)
+.+.+..+...+++.+++||+++||++. ++..|++++|||++...... .++.+.++.+||+.++++++|||
T Consensus 202 ~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~~~~~~~vGpl~~~~~~~-----~~~~~~~~~~wl~~~~~~~vv~v 276 (456)
T 2c1x_A 202 RMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSKLKTYLNIGPFNLITPPP-----VVPNTTGCLQWLKERKPTSVVYI 276 (456)
T ss_dssp HHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHHHSSCEEECCCHHHHC--------------CHHHHHHTSCTTCEEEE
T ss_pred HHHHHHHHhhhhCCEEEECChHHHhHHHHHHHHhcCCCEEEecCcccCcccc-----cccchhhHHHHHhcCCCcceEEE
Confidence 4444445556788999999999999862 33457999999998754311 02345678999998877899999
Q ss_pred eecCCCCCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeeEEeccChhhhhcCCCcceEEecCC
Q 009851 315 SFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCG 394 (524)
Q Consensus 315 s~GS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~vpq~~lL~~~~v~~~ItHgG 394 (524)
||||....+.+.+.+++++++.++++|||+++.. ....+|+++.++.++|+++++|+||.++|+|+++++||||||
T Consensus 277 s~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~----~~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G 352 (456)
T 2c1x_A 277 SFGTVTTPPPAEVVALSEALEASRVPFIWSLRDK----ARVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCG 352 (456)
T ss_dssp ECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGG----GGGGSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCC
T ss_pred ecCccccCCHHHHHHHHHHHHhcCCeEEEEECCc----chhhCCHHHHhhcCCceEEecCCCHHHHhcCCcCCEEEecCC
Confidence 9999988888899999999999999999999765 224578888888899999999999999999999999999999
Q ss_pred hhhHHHHHHcCCceeccCcccchhhhHHhhccccceeeEEecCCCCCCCHHHHHHHHHHHhcCH---HHHHHHHHHHHHH
Q 009851 395 WNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQ---DFKARALELKEKA 471 (524)
Q Consensus 395 ~gs~~Eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~~~~~~~~~~t~~~l~~ai~~~l~~~---~~r~~a~~l~~~~ 471 (524)
+||++||+++|||||++|++.||+.||+++++.+|+|+.++. ..+++++|.++|+++|+|+ +||+||+++++++
T Consensus 353 ~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~~---~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~ 429 (456)
T 2c1x_A 353 WNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEG---GVFTKSGLMSCFDQILSQEKGKKLRENLRALRETA 429 (456)
T ss_dssp HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGG---GSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEecC---CCcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999985599999864 5689999999999999987 8999999999999
Q ss_pred HhhhhcCCCcHHHHHHHHHHH
Q 009851 472 MSSVREGGSSYKTFQNFLQWT 492 (524)
Q Consensus 472 ~~~~~~~g~~~~~~~~~~~~i 492 (524)
++++.+|||++++++++++.+
T Consensus 430 ~~a~~~gGsS~~~l~~~v~~~ 450 (456)
T 2c1x_A 430 DRAVGPKGSSTENFITLVDLV 450 (456)
T ss_dssp HHHTSTTCHHHHHHHHHHHHH
T ss_pred HHhhhcCCcHHHHHHHHHHHH
Confidence 999999999999999999977
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=1.2e-58 Score=480.71 Aligned_cols=430 Identities=25% Similarity=0.421 Sum_probs=323.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCcCh-----hhHHHhhhcCCCCCCCeEEEecCCCC-CCCCC
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDYNH-----KRVVESLQGKNYLGEQIHLVSIPDGM-EPWED 74 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~r--GH~Vt~~~~~~~~-----~~i~~~~~~~~~~~~~i~~~~~~~~~-~~~~~ 74 (524)
+.||+++|+|++||++|++.||++|++| ||+|||++++.+. ..+.+.. ....+++|+.+|++. +..+.
T Consensus 9 ~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~----~~~~~i~~~~lp~~~~~~~~~ 84 (463)
T 2acv_A 9 NSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVL----ASQPQIQLIDLPEVEPPPQEL 84 (463)
T ss_dssp CEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHH----CSCTTEEEEECCCCCCCCGGG
T ss_pred CCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcc----cCCCCceEEECCCCCCCcccc
Confidence 5799999999999999999999999999 9999999998753 2232211 012489999999763 32211
Q ss_pred cccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEECCCchhHHHHHHHcCCceEEEccchHHHHHHHhhccccccc
Q 009851 75 RNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDD 154 (524)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~ 154 (524)
..+....+......+.+.++++++.+.. .++||||+|.++.|+..+|+++|||++.++++++..+..+.+++.+...
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~---~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 161 (463)
T 2acv_A 85 LKSPEFYILTFLESLIPHVKATIKTILS---NKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIE 161 (463)
T ss_dssp GGSHHHHHHHHHHHTHHHHHHHHHHHCC---TTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTT
T ss_pred cCCccHHHHHHHHhhhHHHHHHHHhccC---CCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhccc
Confidence 1121111333345667788888887622 6899999999999999999999999999999998877777665543211
Q ss_pred CCCCCCCCCccccCCCCCCCCCCccccccccchhhhheehhhccCCCCCCccccccccCCC-CCCCcccccccccCCCch
Q 009851 155 GIIDSHGMIPCHVIPYFPPANFNFDACHSRSLLYATVIFFVLYSTSGTPMSMQMFRIAPKM-PEMNSRDCFWAHIGDWTS 233 (524)
Q Consensus 155 ~~~~~~~~~~~~~~~y~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~l~~~~~~~~~~ 233 (524)
+... .... ......+|++ +++...+++. .+...
T Consensus 162 ~~~~-----~~~~--------------------------------------~~~~~~~pg~~~~~~~~~l~~-~~~~~-- 195 (463)
T 2acv_A 162 EVFD-----DSDR--------------------------------------DHQLLNIPGISNQVPSNVLPD-ACFNK-- 195 (463)
T ss_dssp CCCC-----CSSG--------------------------------------GGCEECCTTCSSCEEGGGSCH-HHHCT--
T ss_pred CCCC-----Cccc--------------------------------------cCceeECCCCCCCCChHHCch-hhcCC--
Confidence 1000 0000 0001123444 4444444441 11111
Q ss_pred hhHHHHHHHHHHHhcccccEEEEcCCcccccccccC-------CCcccccccccccCCCCCCCCCCccCcchhhHhhhcC
Q 009851 234 QKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTT-------FPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQ 306 (524)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~-------~~~v~~VGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 306 (524)
. .....+.+.....++++.+++||+++||+....+ .+++++|||++........ ...++.+.++.+||+.+
T Consensus 196 ~-~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~~~p~~~v~~vGpl~~~~~~~~~-~~~~~~~~~~~~wl~~~ 273 (463)
T 2acv_A 196 D-GGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDEKIPPIYAVGPLLDLKGQPNP-KLDQAQHDLILKWLDEQ 273 (463)
T ss_dssp T-THHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHCTTSCCEEECCCCCCSSCCCBT-TBCHHHHHHHHHHHHTS
T ss_pred c-hHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHhccccCCcEEEeCCCccccccccc-ccccccchhHHHHHhcC
Confidence 1 1333444445556788899999999999864322 5789999999865320000 00023456899999998
Q ss_pred CCCceEEEeecCCC-CCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCChhhHHhh--cCCeeEEeccChhhhhcC
Q 009851 307 QPSSVVYVSFGSFT-ILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERV--AARGQMISWAPQLRVLNH 383 (524)
Q Consensus 307 ~~~~vV~vs~GS~~-~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~--~~n~~v~~~vpq~~lL~~ 383 (524)
+++++|||||||.. ..+.+++.+++++|+.++++|||+++.+ ...+|+++.++. ++|+++++|+||.++|+|
T Consensus 274 ~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~-----~~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h 348 (463)
T 2acv_A 274 PDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAE-----KKVFPEGFLEWMELEGKGMICGWAPQVEVLAH 348 (463)
T ss_dssp CTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCC-----GGGSCTTHHHHHHHHCSEEEESSCCHHHHHHS
T ss_pred CCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEECCC-----cccCChhHHHhhccCCCEEEEccCCHHHHhCC
Confidence 77899999999998 7888899999999999999999999753 124678888887 899999999999999999
Q ss_pred CCcceEEecCChhhHHHHHHcCCceeccCcccchhhhHHhh-ccccceeeEE-ecCCCC--CCCHHHHHHHHHHHhc-CH
Q 009851 384 PSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYI-CDFWKVGLKF-DRDEGG--IITREEIKNKVDQVLG-NQ 458 (524)
Q Consensus 384 ~~v~~~ItHgG~gs~~Eal~~GvP~v~~P~~~DQ~~na~rv-~~~lG~G~~~-~~~~~~--~~t~~~l~~ai~~~l~-~~ 458 (524)
+++++||||||+||++||+++|||||++|++.||+.||+++ ++ +|+|+.+ +..+.. .+++++|.++|+++|+ ++
T Consensus 349 ~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~-~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~~ 427 (463)
T 2acv_A 349 KAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKE-WGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDS 427 (463)
T ss_dssp TTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHT-SCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTTC
T ss_pred CccCeEEecCCchhHHHHHHcCCCeeeccchhhhHHHHHHHHHH-cCeEEEEecccCCCCccccHHHHHHHHHHHHhccH
Confidence 99999999999999999999999999999999999999995 67 6999998 321123 6899999999999997 47
Q ss_pred HHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHHH
Q 009851 459 DFKARALELKEKAMSSVREGGSSYKTFQNFLQWTM 493 (524)
Q Consensus 459 ~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~i~ 493 (524)
+||+||+++++++++++.+|||++.+++++++.+.
T Consensus 428 ~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~ 462 (463)
T 2acv_A 428 IVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDIT 462 (463)
T ss_dssp THHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhc
Confidence 89999999999999999999999999999999873
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1.1e-44 Score=373.61 Aligned_cols=397 Identities=19% Similarity=0.204 Sum_probs=276.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcChhhHHHhhhcCCCCCCCeEEEecCCCCCCCC-C----c
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWE-D----R 75 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~-~----~ 75 (524)
|+++||+|++.++.||++|++.||++|+++||+|+|++++.+.+.+++. +++|+.++..++... . .
T Consensus 10 m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~ 80 (424)
T 2iya_A 10 VTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAA---------GATPVVYDSILPKESNPEESWP 80 (424)
T ss_dssp -CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH---------TCEEEECCCCSCCTTCTTCCCC
T ss_pred cccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhC---------CCEEEecCccccccccchhhcc
Confidence 5678999999999999999999999999999999999999888777765 789999887644321 1 2
Q ss_pred ccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEECCCchhHHHHHHHcCCceEEEccchHHHHHHHhhcccccccC
Q 009851 76 NDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDG 155 (524)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~ 155 (524)
.+....+..+........+++.+.+++ .+||+||+|.+..|+..+|+++|||++.+++.+....... ..+..+..+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~-~~~~~~~~~ 156 (424)
T 2iya_A 81 EDQESAMGLFLDEAVRVLPQLEDAYAD---DRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFE-EDVPAVQDP 156 (424)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHTTT---SCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHH-HHSGGGSCC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhc---cCCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccccc-ccccccccc
Confidence 233344444444444455556665554 7899999999888999999999999999887653110000 000000000
Q ss_pred CCCCCCCCccccCCCCCCCCCCccccccccchhhhheehhhccCCCCCCccccccccCCCCCCCcccccccccCCCchhh
Q 009851 156 IIDSHGMIPCHVIPYFPPANFNFDACHSRSLLYATVIFFVLYSTSGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQK 235 (524)
Q Consensus 156 ~~~~~~~~~~~~~~y~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~ 235 (524)
..+. + ..++ ++... .... .... ..+ ...
T Consensus 157 ~~~~---~---~~~~-~~~~~--------------------------~~~~----------~~~~-~~~--------~~~ 184 (424)
T 2iya_A 157 TADR---G---EEAA-APAGT--------------------------GDAE----------EGAE-AED--------GLV 184 (424)
T ss_dssp CC-----------------------------------------------------------------HH--------HHH
T ss_pred cccc---c---cccc-ccccc--------------------------ccch----------hhhc-cch--------hHH
Confidence 0000 0 0000 00000 0000 0000 000 000
Q ss_pred HHHHHHHHHH----------HhcccccEEEEcCCcccccccccCCCcccccccccccCCCCCCCCCCccCcchhhHhhhc
Q 009851 236 IFFDLLERNT----------RAMIAVNFHFCNSTYELESEAFTTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQ 305 (524)
Q Consensus 236 ~~~~~~~~~~----------~~~~~~~~~l~ns~~~le~~~~~~~~~v~~VGp~~~~~~~~~~~~~~~~~~~~l~~~l~~ 305 (524)
.+.+.+.+.. .....++.+++|++++++++..++++++++|||+...... ..+|++.
T Consensus 185 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~vGp~~~~~~~-------------~~~~~~~ 251 (424)
T 2iya_A 185 RFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIKGDTVGDNYTFVGPTYGDRSH-------------QGTWEGP 251 (424)
T ss_dssp HHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTTGGGCCTTEEECCCCCCCCGG-------------GCCCCCC
T ss_pred HHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCCccCCCCCEEEeCCCCCCccc-------------CCCCCcc
Confidence 0001111110 1112567899999999998756678899999997643210 1245654
Q ss_pred CCCCceEEEeecCCCCCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeeEEeccChhhhhcCCC
Q 009851 306 QQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPS 385 (524)
Q Consensus 306 ~~~~~vV~vs~GS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~vpq~~lL~~~~ 385 (524)
.+++++|||++||......+.+.+++++++..+.+++|.++.+.. .+.+ +..++|+.+.+|+||.++|+|++
T Consensus 252 ~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~-------~~~~-~~~~~~v~~~~~~~~~~~l~~~d 323 (424)
T 2iya_A 252 GDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVLSVGRFVD-------PADL-GEVPPNVEVHQWVPQLDILTKAS 323 (424)
T ss_dssp CSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEEECCTTSC-------GGGG-CSCCTTEEEESSCCHHHHHTTCS
T ss_pred CCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEEEECCcCC-------hHHh-ccCCCCeEEecCCCHHHHHhhCC
Confidence 445779999999998666788889999998889999998875411 1111 12467899999999999997776
Q ss_pred cceEEecCChhhHHHHHHcCCceeccCcccchhhhHHhhccccceeeEEecCCCCCCCHHHHHHHHHHHhcCHHHHHHHH
Q 009851 386 IACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARAL 465 (524)
Q Consensus 386 v~~~ItHgG~gs~~Eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~~~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~ 465 (524)
+ ||||||+||++||+++|||+|++|...||+.||+++++ +|+|+.++. ..++.++|.++|.++|+|++|+++++
T Consensus 324 ~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~ 397 (424)
T 2iya_A 324 A--FITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVE-LGLGRHIPR---DQVTAEKLREAVLAVASDPGVAERLA 397 (424)
T ss_dssp E--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-TTSEEECCG---GGCCHHHHHHHHHHHHHCHHHHHHHH
T ss_pred E--EEECCchhHHHHHHHcCCCEEEecCccchHHHHHHHHH-CCCEEEcCc---CCCCHHHHHHHHHHHHcCHHHHHHHH
Confidence 6 99999999999999999999999999999999999998 599999865 45899999999999999999999999
Q ss_pred HHHHHHHhhhhcCCCcHHHHHHHHHHHHHHhh
Q 009851 466 ELKEKAMSSVREGGSSYKTFQNFLQWTMNALK 497 (524)
Q Consensus 466 ~l~~~~~~~~~~~g~~~~~~~~~~~~i~~~~~ 497 (524)
++++++++ .+| .++++++|++.++
T Consensus 398 ~~~~~~~~---~~~-----~~~~~~~i~~~~~ 421 (424)
T 2iya_A 398 AVRQEIRE---AGG-----ARAAADILEGILA 421 (424)
T ss_dssp HHHHHHHT---SCH-----HHHHHHHHHHHHH
T ss_pred HHHHHHHh---cCc-----HHHHHHHHHHHHh
Confidence 99999987 244 6777777777654
No 7
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=2.7e-44 Score=369.48 Aligned_cols=394 Identities=14% Similarity=0.105 Sum_probs=263.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcChhhHHHhhhcCCCCCCCeEEEecCCCCCCC-CC-cccHHHH
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPW-ED-RNDLGKL 81 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~-~~-~~~~~~~ 81 (524)
+||+|++.++.||++|++.||++|+++||+|||++++...+.+.+. +++++.++...... .. .......
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~---------g~~~~~i~~~~~~~~~~~~~~~~~~ 71 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEV---------GVPHVPVGPSARAPIQRAKPLTAED 71 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCCEEECCC-------CCSCCCHHH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHc---------CCeeeeCCCCHHHHhhcccccchHH
Confidence 4899999999999999999999999999999999999877767654 78898888543211 00 1111111
Q ss_pred HHHHHHhccHHHHHHHHHHhcCCCCCccEEEECC-Cchh--HHHHHHHcCCceEEEccchHHHHHHHhhcccccccCCCC
Q 009851 82 IEKCLQVMPGKLEELIEEINSREDEKIDCFIADG-NIGW--SMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIID 158 (524)
Q Consensus 82 ~~~~~~~~~~~~~~ll~~l~~~~~~~~D~vI~D~-~~~~--~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (524)
+. ..+.....++++.+.... .+||+||+|. +..| +..+|+++|||++.+.+++...
T Consensus 72 ~~---~~~~~~~~~~~~~l~~~~-~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~----------------- 130 (415)
T 1iir_A 72 VR---RFTTEAIATQFDEIPAAA-EGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYV----------------- 130 (415)
T ss_dssp HH---HHHHHHHHHHHHHHHHHT-TTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGS-----------------
T ss_pred HH---HHHHHHHHHHHHHHHHHh-cCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcC-----------------
Confidence 11 112222233333333111 7899999998 5668 8999999999999988765321
Q ss_pred CCCCCccccCCCCCCCCCCccccccc-cchhhhheehhhccCCCCCCccccccccCCCCCCCcccccccccCCCchhhHH
Q 009851 159 SHGMIPCHVIPYFPPANFNFDACHSR-SLLYATVIFFVLYSTSGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIF 237 (524)
Q Consensus 159 ~~~~~~~~~~~y~P~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~ 237 (524)
+..|.|+...++ ...++ +.++..+.+.+......+...........+++.. . . +
T Consensus 131 --------~~~~~p~~~~~~-~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-----~-------~----~ 185 (415)
T 1iir_A 131 --------PSPYYPPPPLGE-PSTQDTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPV-----E-------D----I 185 (415)
T ss_dssp --------CCSSSCCCC----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC-----C-------C----H
T ss_pred --------CCcccCCccCCc-cccchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCC-----C-------c----c
Confidence 112334332210 00000 1111110000000000000000000000001000 0 0 0
Q ss_pred HHHHHHHHHhcccccEEEEcCCccccc-ccccCCCcccccccccccCCCCCCCCCCccCcchhhHhhhcCCCCceEEEee
Q 009851 238 FDLLERNTRAMIAVNFHFCNSTYELES-EAFTTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSF 316 (524)
Q Consensus 238 ~~~~~~~~~~~~~~~~~l~ns~~~le~-~~~~~~~~v~~VGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~ 316 (524)
.+..... .+++|+++++++ +...+ ++++|||+..+.. ++.+.++.+||+.++ ++|||++
T Consensus 186 -------~~~~~~~-~~l~~~~~~l~~~~~~~~--~~~~vG~~~~~~~--------~~~~~~~~~~l~~~~--~~v~v~~ 245 (415)
T 1iir_A 186 -------FTFGYTD-HPWVAADPVLAPLQPTDL--DAVQTGAWILPDE--------RPLSPELAAFLDAGP--PPVYLGF 245 (415)
T ss_dssp -------HHHHHCS-SCEECSCTTTSCCCCCSS--CCEECCCCCCCCC--------CCCCHHHHHHHHTSS--CCEEEEC
T ss_pred -------ccccCCC-CEEEeeChhhcCCCcccC--CeEeeCCCccCcc--------cCCCHHHHHHHhhCC--CeEEEeC
Confidence 0111223 689999999998 53333 8999999986532 235677889998654 5999999
Q ss_pred cCCCCCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeeEEeccChhhhhcCCCcceEEecCChh
Q 009851 317 GSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWN 396 (524)
Q Consensus 317 GS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~vpq~~lL~~~~v~~~ItHgG~g 396 (524)
||.. ...+.+..+++++++.+.+++|+++.+. . .. +..++|+.+.+|+||.++| +++++||||||+|
T Consensus 246 Gs~~-~~~~~~~~~~~al~~~~~~~v~~~g~~~----~-~~-----~~~~~~v~~~~~~~~~~~l--~~~d~~v~~~G~~ 312 (415)
T 1iir_A 246 GSLG-APADAVRVAIDAIRAHGRRVILSRGWAD----L-VL-----PDDGADCFAIGEVNHQVLF--GRVAAVIHHGGAG 312 (415)
T ss_dssp C----CCHHHHHHHHHHHHHTTCCEEECTTCTT----C-CC-----SSCGGGEEECSSCCHHHHG--GGSSEEEECCCHH
T ss_pred CCCC-CcHHHHHHHHHHHHHCCCeEEEEeCCCc----c-cc-----cCCCCCEEEeCcCChHHHH--hhCCEEEeCCChh
Confidence 9986 5677888899999999999999886541 1 11 1246789999999999999 6666699999999
Q ss_pred hHHHHHHcCCceeccCcccchhhhHHhhccccceeeEEecCCCCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhh
Q 009851 397 STMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVR 476 (524)
Q Consensus 397 s~~Eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~~~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~~~~ 476 (524)
|++||+++|||+|++|...||..||+++++ .|+|+.++. ..++.++|.++|.++ +|++|+++++++++++++
T Consensus 313 t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~---~~~~~~~l~~~i~~l-~~~~~~~~~~~~~~~~~~--- 384 (415)
T 1iir_A 313 TTHVAARAGAPQILLPQMADQPYYAGRVAE-LGVGVAHDG---PIPTFDSLSAALATA-LTPETHARATAVAGTIRT--- 384 (415)
T ss_dssp HHHHHHHHTCCEEECCCSTTHHHHHHHHHH-HTSEEECSS---SSCCHHHHHHHHHHH-TSHHHHHHHHHHHHHSCS---
T ss_pred HHHHHHHcCCCEEECCCCCccHHHHHHHHH-CCCcccCCc---CCCCHHHHHHHHHHH-cCHHHHHHHHHHHHHHhh---
Confidence 999999999999999999999999999988 599998865 458999999999999 999999999999998864
Q ss_pred cCCCcHHHHHHHHHHHHHHhhc
Q 009851 477 EGGSSYKTFQNFLQWTMNALKK 498 (524)
Q Consensus 477 ~~g~~~~~~~~~~~~i~~~~~~ 498 (524)
....++++++|++.+++
T Consensus 385 -----~~~~~~~~~~i~~~~~~ 401 (415)
T 1iir_A 385 -----DGAAVAARLLLDAVSRE 401 (415)
T ss_dssp -----CHHHHHHHHHHHHHHTC
T ss_pred -----cChHHHHHHHHHHHHhc
Confidence 34588999999998873
No 8
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=3.2e-43 Score=359.61 Aligned_cols=358 Identities=14% Similarity=0.157 Sum_probs=231.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcChhhHHHhhhcCCCCCCCeEEEecCCCCCCC----------
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPW---------- 72 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~---------- 72 (524)
.+||+|+++|+.||++|++.||++|++|||+|||++++.+...++ .++.++.+.......
T Consensus 22 ~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~~----------~g~~~~~~~~~~~~~~~~~~~~~~~ 91 (400)
T 4amg_A 22 SMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVAE----------AGLCAVDVSPGVNYAKLFVPDDTDV 91 (400)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHHT----------TTCEEEESSTTCCSHHHHSCCC---
T ss_pred CCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHHh----------cCCeeEecCCchhHhhhcccccccc
Confidence 579999999999999999999999999999999999988766443 267777765332211
Q ss_pred -C----CcccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEECCCchhHHHHHHHcCCceEEEccchHHHHHHHhh
Q 009851 73 -E----DRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFR 147 (524)
Q Consensus 73 -~----~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~ 147 (524)
. ...........+.......+.++++.++. .+||+||+|.+.+++..+|+.+|||++.+...+.........
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~~~~ 168 (400)
T 4amg_A 92 TDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARS---WRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPGLGA 168 (400)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHHHHH
T ss_pred ccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCEEEECcchHHHHHHHHHcCCCceeecccccccccchhh
Confidence 0 00111112222223333444555555554 789999999999999999999999999876543221110000
Q ss_pred cccccccCCCCCCCCCccccCCCCCCCCCCccccccccchhhhheehhhccCCCCCCccccccccCCCCCCCcccccccc
Q 009851 148 IPKLIDDGIIDSHGMIPCHVIPYFPPANFNFDACHSRSLLYATVIFFVLYSTSGTPMSMQMFRIAPKMPEMNSRDCFWAH 227 (524)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~y~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~ 227 (524)
+..+. +...+.+ .++...
T Consensus 169 -------------------------------------~~~~~---l~~~~~~-------------~~~~~~--------- 186 (400)
T 4amg_A 169 -------------------------------------LIRRA---MSKDYER-------------HGVTGE--------- 186 (400)
T ss_dssp -------------------------------------HHHHH---THHHHHH-------------TTCCCC---------
T ss_pred -------------------------------------HHHHH---HHHHHHH-------------hCCCcc---------
Confidence 00000 0000000 000000
Q ss_pred cCCCchhhHHHHHHHHHHHhcccccEEEEcCCccccc--ccccCCCcccccccccccCCCCCCCCCCccCcchhhHhhhc
Q 009851 228 IGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELES--EAFTTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQ 305 (524)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~--~~~~~~~~v~~VGp~~~~~~~~~~~~~~~~~~~~l~~~l~~ 305 (524)
......+....+.+.. +.....+....+.+.... ....+.+|++.
T Consensus 187 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~l~~ 233 (400)
T 4amg_A 187 ---------------------PTGSVRLTTTPPSVEALLPEDRRSPGAWPMRYVPYN------------GGAVLPDWLPP 233 (400)
T ss_dssp ---------------------CSCEEEEECCCHHHHHTSCGGGCCTTCEECCCCCCC------------CCEECCTTCSC
T ss_pred ---------------------cccchhhcccCchhhccCcccccCCcccCccccccc------------ccccCcccccc
Confidence 0011111111111110 000111111222211111 11222357877
Q ss_pred CCCCceEEEeecCCCCCC--HHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeeEEeccChhhhhcC
Q 009851 306 QQPSSVVYVSFGSFTILD--QVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNH 383 (524)
Q Consensus 306 ~~~~~vV~vs~GS~~~~~--~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~vpq~~lL~~ 383 (524)
.+++++|||||||....+ .+.+..+++++++.+.+++|..+.... ... ...++|+++.+|+||.++|+|
T Consensus 234 ~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~----~~~-----~~~~~~v~~~~~~p~~~lL~~ 304 (400)
T 4amg_A 234 AAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGGDL----ALL-----GELPANVRVVEWIPLGALLET 304 (400)
T ss_dssp CTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTTCC----CCC-----CCCCTTEEEECCCCHHHHHTT
T ss_pred cCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCccc----ccc-----ccCCCCEEEEeecCHHHHhhh
Confidence 777889999999985443 356788999999999999999866521 111 124688999999999999977
Q ss_pred CCcceEEecCChhhHHHHHHcCCceeccCcccchhhhHHhhccccceeeEEecCCCCCCCHHHHHHHHHHHhcCHHHHHH
Q 009851 384 PSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKAR 463 (524)
Q Consensus 384 ~~v~~~ItHgG~gs~~Eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~~~~~~~~~~t~~~l~~ai~~~l~~~~~r~~ 463 (524)
+++ ||||||+||++||+++|||+|++|++.||+.||+++++ +|+|+.++. ..+++ ++|+++|+|++||+|
T Consensus 305 ~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~-~G~g~~l~~---~~~~~----~al~~lL~d~~~r~~ 374 (400)
T 4amg_A 305 CDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTG-LGIGFDAEA---GSLGA----EQCRRLLDDAGLREA 374 (400)
T ss_dssp CSE--EEECCCHHHHHHHHHHTCCEEECCC---CHHHHHHHHH-HTSEEECCT---TTCSH----HHHHHHHHCHHHHHH
T ss_pred hhh--eeccCCccHHHHHHHhCCCEEEecCcccHHHHHHHHHH-CCCEEEcCC---CCchH----HHHHHHHcCHHHHHH
Confidence 665 99999999999999999999999999999999999999 599999875 44555 467789999999999
Q ss_pred HHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHH
Q 009851 464 ALELKEKAMSSVREGGSSYKTFQNFLQWTMNA 495 (524)
Q Consensus 464 a~~l~~~~~~~~~~~g~~~~~~~~~~~~i~~~ 495 (524)
|+++++++++. +| ..++++.||+.
T Consensus 375 a~~l~~~~~~~---~~-----~~~~a~~le~l 398 (400)
T 4amg_A 375 ALRVRQEMSEM---PP-----PAETAAXLVAL 398 (400)
T ss_dssp HHHHHHHHHTS---CC-----HHHHHHHHHHH
T ss_pred HHHHHHHHHcC---CC-----HHHHHHHHHHh
Confidence 99999999973 54 56777777764
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=6.2e-43 Score=359.48 Aligned_cols=395 Identities=13% Similarity=0.030 Sum_probs=262.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcChhhHHHhhhcCCCCCCCeEEEecCCCCCCC-C--CcccHHH
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPW-E--DRNDLGK 80 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~-~--~~~~~~~ 80 (524)
+||+|++.++.||++|++.||++|+++||+|+|++++...+.+++. |++++.++...... . .......
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~---------g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEV---------GVPHVPVGLPQHMMLQEGMPPPPPE 71 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH---------TCCEEECSCCGGGCCCTTSCCCCHH
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc---------CCeeeecCCCHHHHHhhccccchhH
Confidence 4899999999999999999999999999999999998877777765 78888887542111 0 0111111
Q ss_pred HHHHHHHhccHHHHHHHHHHhcCCCCCccEEEECC-Cchh--HHHHHHHcCCceEEEccchHHHHHHHhhcccccccCCC
Q 009851 81 LIEKCLQVMPGKLEELIEEINSREDEKIDCFIADG-NIGW--SMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGII 157 (524)
Q Consensus 81 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~D~vI~D~-~~~~--~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (524)
.+..+ ......++++.+.... .+||+||+|. ..++ +..+|+.+|||++.+.+++...
T Consensus 72 ~~~~~---~~~~~~~~~~~l~~~~-~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~---------------- 131 (416)
T 1rrv_A 72 EEQRL---AAMTVEMQFDAVPGAA-EGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYL---------------- 131 (416)
T ss_dssp HHHHH---HHHHHHHHHHHHHHHT-TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGS----------------
T ss_pred HHHHH---HHHHHHHHHHHHHHHh-cCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCC----------------
Confidence 11111 1122334444443111 6899999997 4557 8999999999999887665321
Q ss_pred CCCCCCccccCCCCCCCCCCccccccccchhhhheehhhccCCCCCCccccccccCCCCCCCcccccccccCCCchhhHH
Q 009851 158 DSHGMIPCHVIPYFPPANFNFDACHSRSLLYATVIFFVLYSTSGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIF 237 (524)
Q Consensus 158 ~~~~~~~~~~~~y~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~ 237 (524)
+.+|+|+ .++.....++..++..+.+.+...+..+......+....+++.. .
T Consensus 132 ---------~~~~~p~-~~~~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-----~------------- 183 (416)
T 1rrv_A 132 ---------ASPHLPP-AYDEPTTPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPV-----E------------- 183 (416)
T ss_dssp ---------CCSSSCC-CBCSCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC-----S-------------
T ss_pred ---------CCcccCC-CCCCCCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCC-----C-------------
Confidence 0112221 00000000001111100000000000000000000000000000 0
Q ss_pred HHHHHHHHHhcccccEEEEcCCcccccccccCCCcccccccccccCCCCCCCCCCccCcchhhHhhhcCCCCceEEEeec
Q 009851 238 FDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFG 317 (524)
Q Consensus 238 ~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~v~~VGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~G 317 (524)
...+..... .+++|++++++++...+ ++++|||+..+.. ++.+.++.+|++.++ ++|||++|
T Consensus 184 -----~~~~~~~~~-~~l~~~~~~l~~~~~~~--~~~~vG~~~~~~~--------~~~~~~~~~~l~~~~--~~v~v~~G 245 (416)
T 1rrv_A 184 -----DVFGYGHGE-RPLLAADPVLAPLQPDV--DAVQTGAWLLSDE--------RPLPPELEAFLAAGS--PPVHIGFG 245 (416)
T ss_dssp -----CHHHHTTCS-SCEECSCTTTSCCCSSC--CCEECCCCCCCCC--------CCCCHHHHHHHHSSS--CCEEECCT
T ss_pred -----chhhhccCC-CeEEccCccccCCCCCC--CeeeECCCccCcc--------CCCCHHHHHHHhcCC--CeEEEecC
Confidence 000111233 68999999999863333 8999999986532 235677889998653 59999999
Q ss_pred CCCC-CCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeeEEeccChhhhhcCCCcceEEecCChh
Q 009851 318 SFTI-LDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWN 396 (524)
Q Consensus 318 S~~~-~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~vpq~~lL~~~~v~~~ItHgG~g 396 (524)
|... ...+.+..+++++++.+.+++|+++.+. . .. +..++|+.+.+|+||.++| +++++||||||+|
T Consensus 246 s~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~----~-~~-----~~~~~~v~~~~~~~~~~ll--~~~d~~v~~~G~~ 313 (416)
T 1rrv_A 246 SSSGRGIADAAKVAVEAIRAQGRRVILSRGWTE----L-VL-----PDDRDDCFAIDEVNFQALF--RRVAAVIHHGSAG 313 (416)
T ss_dssp TCCSHHHHHHHHHHHHHHHHTTCCEEEECTTTT----C-CC-----SCCCTTEEEESSCCHHHHG--GGSSEEEECCCHH
T ss_pred CCCccChHHHHHHHHHHHHHCCCeEEEEeCCcc----c-cc-----cCCCCCEEEeccCChHHHh--ccCCEEEecCChh
Confidence 9854 3456778899999999999999987651 1 11 1246789999999999999 6666699999999
Q ss_pred hHHHHHHcCCceeccCcccchhhhHHhhccccceeeEEecCCCCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhh
Q 009851 397 STMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVR 476 (524)
Q Consensus 397 s~~Eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~~~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~~~~ 476 (524)
|++||+++|||+|++|...||+.||+++++ .|+|+.++. ..++.++|.++|.++ +|++|+++++++++++++
T Consensus 314 t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~---~~~~~~~l~~~i~~l-~~~~~~~~~~~~~~~~~~--- 385 (416)
T 1rrv_A 314 TEHVATRAGVPQLVIPRNTDQPYFAGRVAA-LGIGVAHDG---PTPTFESLSAALTTV-LAPETRARAEAVAGMVLT--- 385 (416)
T ss_dssp HHHHHHHHTCCEEECCCSBTHHHHHHHHHH-HTSEEECSS---SCCCHHHHHHHHHHH-TSHHHHHHHHHHTTTCCC---
T ss_pred HHHHHHHcCCCEEEccCCCCcHHHHHHHHH-CCCccCCCC---CCCCHHHHHHHHHHh-hCHHHHHHHHHHHHHHhh---
Confidence 999999999999999999999999999998 599998865 458999999999999 999999999999988875
Q ss_pred cCCCcHHHHHHHHHHH-HHHhhcc
Q 009851 477 EGGSSYKTFQNFLQWT-MNALKKQ 499 (524)
Q Consensus 477 ~~g~~~~~~~~~~~~i-~~~~~~~ 499 (524)
.... +++++| ++..+++
T Consensus 386 -----~~~~-~~~~~i~e~~~~~~ 403 (416)
T 1rrv_A 386 -----DGAA-AAADLVLAAVGREK 403 (416)
T ss_dssp -----CHHH-HHHHHHHHHHHC--
T ss_pred -----cCcH-HHHHHHHHHHhccC
Confidence 2235 888888 8877633
No 10
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=1.2e-40 Score=340.94 Aligned_cols=378 Identities=15% Similarity=0.093 Sum_probs=261.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcChhhHHHhhhcCCCCCCCeEEEecCCCCCCC--CCcccHHHH
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPW--EDRNDLGKL 81 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~ 81 (524)
+||+|++.++.||++|++.||++|+++||+|+|++++...+.+++. ++.+..++...... ....+....
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~~---------g~~~~~l~~~~~~~~~~~~~~~~~~ 71 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEV---------GVPMVPVGRAVRAGAREPGELPPGA 71 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHHT---------TCCEEECSSCSSGGGSCTTCCCTTC
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc---------CCceeecCCCHHHHhccccCCHHHH
Confidence 4799999999999999999999999999999999998888888765 78888887432211 000011111
Q ss_pred HHHHHHhccHHHHHHHHHHhcCCCCCccEEEECCCchhH---HHHHHHcCCceEEEccchHHHHHHHhhcccccccCCCC
Q 009851 82 IEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWS---MEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDGIID 158 (524)
Q Consensus 82 ~~~~~~~~~~~~~~ll~~l~~~~~~~~D~vI~D~~~~~~---~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (524)
...+.......++++.+.+ .+||+||+|.....+ ..+|+.+|||++.+..++......
T Consensus 72 ~~~~~~~~~~~~~~l~~~~-----~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~-------------- 132 (404)
T 3h4t_A 72 AEVVTEVVAEWFDKVPAAI-----EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSE-------------- 132 (404)
T ss_dssp GGGHHHHHHHHHHHHHHHH-----TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGG--------------
T ss_pred HHHHHHHHHHHHHHHHHHh-----cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCCh--------------
Confidence 1112222233333333332 469999999765544 788999999999887765421000
Q ss_pred CCCCCccccCCCCCCCCCCccccccccchhhhheehhhccCCCCCCccccccccCCCCCCCcccccccccCCCchhhHHH
Q 009851 159 SHGMIPCHVIPYFPPANFNFDACHSRSLLYATVIFFVLYSTSGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQKIFF 238 (524)
Q Consensus 159 ~~~~~~~~~~~y~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~ 238 (524)
+.. ...+..+...|. .+....+......++++... ..
T Consensus 133 -----------~~~--------~~~~~~~~~~~~--------~~~~~~~~~~~~lgl~~~~~--~~-------------- 169 (404)
T 3h4t_A 133 -----------QSQ--------AERDMYNQGADR--------LFGDAVNSHRASIGLPPVEH--LY-------------- 169 (404)
T ss_dssp -----------SCH--------HHHHHHHHHHHH--------HHHHHHHHHHHHTTCCCCCC--HH--------------
T ss_pred -----------hHH--------HHHHHHHHHHHH--------HhHHHHHHHHHHcCCCCCcc--hh--------------
Confidence 000 000000000000 00000000001112221100 00
Q ss_pred HHHHHHHHhcccccEEEEcCCcccccccccCCCcccccccccccCCCCCCCCCCccCcchhhHhhhcCCCCceEEEeecC
Q 009851 239 DLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGS 318 (524)
Q Consensus 239 ~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~v~~VGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS 318 (524)
.. ...+..+++..+.+.+. .++.++++++|++..+.. .+.++++.+|++.. +++|||++||
T Consensus 170 -------~~-~~~~~~l~~~~~~l~p~-~~~~~~~~~~G~~~~~~~--------~~~~~~l~~~l~~~--~~~Vlv~~Gs 230 (404)
T 3h4t_A 170 -------DY-GYTDQPWLAADPVLSPL-RPTDLGTVQTGAWILPDQ--------RPLSAELEGFLRAG--SPPVYVGFGS 230 (404)
T ss_dssp -------HH-HHCSSCEECSCTTTSCC-CTTCCSCCBCCCCCCCCC--------CCCCHHHHHHHHTS--SCCEEECCTT
T ss_pred -------hc-cccCCeEEeeCcceeCC-CCCCCCeEEeCccccCCC--------CCCCHHHHHHHhcC--CCeEEEECCC
Confidence 00 01223466888888776 567789999998876532 24667888999864 4599999999
Q ss_pred CCCCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeeEEeccChhhhhcCCCcceEEecCChhhH
Q 009851 319 FTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNST 398 (524)
Q Consensus 319 ~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~vpq~~lL~~~~v~~~ItHgG~gs~ 398 (524)
... ..+.+..+++++++.+.++||+.+... ... . ..++|+.+.+|+||.++|. ++++||||||.||+
T Consensus 231 ~~~-~~~~~~~~~~al~~~~~~vv~~~g~~~----~~~-~-----~~~~~v~~~~~~~~~~ll~--~~d~~v~~gG~~t~ 297 (404)
T 3h4t_A 231 GPA-PAEAARVAIEAVRAQGRRVVLSSGWAG----LGR-I-----DEGDDCLVVGEVNHQVLFG--RVAAVVHHGGAGTT 297 (404)
T ss_dssp SCC-CTTHHHHHHHHHHHTTCCEEEECTTTT----CCC-S-----SCCTTEEEESSCCHHHHGG--GSSEEEECCCHHHH
T ss_pred CCC-cHHHHHHHHHHHHhCCCEEEEEeCCcc----ccc-c-----cCCCCEEEecCCCHHHHHh--hCcEEEECCcHHHH
Confidence 876 667888899999999999999987541 111 1 1368899999999999995 45559999999999
Q ss_pred HHHHHcCCceeccCcccchhhhHHhhccccceeeEEecCCCCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhhcC
Q 009851 399 MEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREG 478 (524)
Q Consensus 399 ~Eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~~~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~~~~~~ 478 (524)
.||+++|||+|++|+..||+.||+++++ .|+|+.++. ..++.++|.++|.++|+ ++|+++++++++.+++
T Consensus 298 ~Eal~~GvP~v~~p~~~dQ~~na~~~~~-~G~g~~l~~---~~~~~~~l~~ai~~ll~-~~~~~~~~~~~~~~~~----- 367 (404)
T 3h4t_A 298 TAVTRAGAPQVVVPQKADQPYYAGRVAD-LGVGVAHDG---PTPTVESLSAALATALT-PGIRARAAAVAGTIRT----- 367 (404)
T ss_dssp HHHHHHTCCEEECCCSTTHHHHHHHHHH-HTSEEECSS---SSCCHHHHHHHHHHHTS-HHHHHHHHHHHTTCCC-----
T ss_pred HHHHHcCCCEEEcCCcccHHHHHHHHHH-CCCEeccCc---CCCCHHHHHHHHHHHhC-HHHHHHHHHHHHHHhh-----
Confidence 9999999999999999999999999999 599999875 56899999999999998 9999999999988753
Q ss_pred CCcHHHHHHHHHHHHHHhhc
Q 009851 479 GSSYKTFQNFLQWTMNALKK 498 (524)
Q Consensus 479 g~~~~~~~~~~~~i~~~~~~ 498 (524)
+..++++++|++.++.
T Consensus 368 ----~~~~~~~~~i~~~~~~ 383 (404)
T 3h4t_A 368 ----DGTTVAAKLLLEAISR 383 (404)
T ss_dssp ----CHHHHHHHHHHHHHHC
T ss_pred ----hHHHHHHHHHHHHHhh
Confidence 3488899999988763
No 11
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=7.9e-39 Score=328.77 Aligned_cols=380 Identities=16% Similarity=0.181 Sum_probs=266.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcChhhHHHhhhcCCCCCCCeEEEecCCCCCCCCC-----ccc
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWED-----RND 77 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~-----~~~ 77 (524)
++||+|++.++.||++|++.||++|+++||+|+|++++...+.+++. ++.+..++...+.... ..+
T Consensus 20 m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~~~ 90 (415)
T 3rsc_A 20 MAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRAA---------GATVVPYQSEIIDADAAEVFGSDD 90 (415)
T ss_dssp CCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCEEEECCCSTTTCCHHHHHHSSS
T ss_pred CCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHhc---------CCEEEeccccccccccchhhcccc
Confidence 47999999999999999999999999999999999998888887764 7999998865443210 011
Q ss_pred HHHHHHH-HHHhccHHHHHHHHHHhcCCCCCccEEEEC-CCchhHHHHHHHcCCceEEEccchHHHHHHHhhcccccccC
Q 009851 78 LGKLIEK-CLQVMPGKLEELIEEINSREDEKIDCFIAD-GNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDG 155 (524)
Q Consensus 78 ~~~~~~~-~~~~~~~~~~~ll~~l~~~~~~~~D~vI~D-~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~ 155 (524)
....+.. +.......++++.+.+++ .+||+||+| ...+++..+|+++|||++.+.+......
T Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~l~~---~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~------------- 154 (415)
T 3rsc_A 91 LGVRPHLMYLRENVSVLRATAEALDG---DVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNE------------- 154 (415)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHSS---SCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCS-------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc---cCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccC-------------
Confidence 1112222 333334445566666665 899999999 7777899999999999998764422100
Q ss_pred CCCCCCCCccccCCCCCCCCCCccccccccchhhhheehhhccCCCCCCccccccccCCCCCCCcccccccccCCCchhh
Q 009851 156 IIDSHGMIPCHVIPYFPPANFNFDACHSRSLLYATVIFFVLYSTSGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQK 235 (524)
Q Consensus 156 ~~~~~~~~~~~~~~y~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~ 235 (524)
.|.+ ............+. .. .....
T Consensus 155 -------------~~~~--------------------------------~~~~~~~~~~~~p~----~~------~~~~~ 179 (415)
T 3rsc_A 155 -------------HYSF--------------------------------SQDMVTLAGTIDPL----DL------PVFRD 179 (415)
T ss_dssp -------------SCCH--------------------------------HHHHHHHHTCCCGG----GC------HHHHH
T ss_pred -------------cccc--------------------------------ccccccccccCChh----hH------HHHHH
Confidence 0000 00000000000000 00 00000
Q ss_pred HHHHHHHHH------HHhccc-ccEEEEcCCcccccccccCCCcccccccccccCCCCCCCCCCccCcchhhHhhhcCCC
Q 009851 236 IFFDLLERN------TRAMIA-VNFHFCNSTYELESEAFTTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQP 308 (524)
Q Consensus 236 ~~~~~~~~~------~~~~~~-~~~~l~ns~~~le~~~~~~~~~v~~VGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 308 (524)
.+.+...+. ...... .+..++...+.++++...++.++.++||+..+.... .+|....++
T Consensus 180 ~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~vGp~~~~~~~~-------------~~~~~~~~~ 246 (415)
T 3rsc_A 180 TLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIAGDTFDDRFVFVGPCFDDRRFL-------------GEWTRPADD 246 (415)
T ss_dssp HHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTTGGGCCTTEEECCCCCCCCGGG-------------CCCCCCSSC
T ss_pred HHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCCcccCCCceEEeCCCCCCcccC-------------cCccccCCC
Confidence 000000000 011122 277888888899887556677899999987543211 133433445
Q ss_pred CceEEEeecCCCCCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeeEEeccChhhhhcCCCcce
Q 009851 309 SSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIAC 388 (524)
Q Consensus 309 ~~vV~vs~GS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~vpq~~lL~~~~v~~ 388 (524)
+++||+++||......+.+..+++++++.+.+++|.++.+... +. .+..++|+.+.+|+||.++|+++++
T Consensus 247 ~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~-------~~-l~~~~~~v~~~~~~~~~~ll~~ad~-- 316 (415)
T 3rsc_A 247 LPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTLGGQVDP-------AA-LGDLPPNVEAHRWVPHVKVLEQATV-- 316 (415)
T ss_dssp CCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEECTTTSCG-------GG-GCCCCTTEEEESCCCHHHHHHHEEE--
T ss_pred CCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEeCCCCCh-------HH-hcCCCCcEEEEecCCHHHHHhhCCE--
Confidence 6799999999877677888899999998889999988754111 11 1134678999999999999966555
Q ss_pred EEecCChhhHHHHHHcCCceeccCcccchhhhHHhhccccceeeEEecCCCCCCCHHHHHHHHHHHhcCHHHHHHHHHHH
Q 009851 389 FLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELK 468 (524)
Q Consensus 389 ~ItHgG~gs~~Eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~~~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~ 468 (524)
||||||.||+.||+++|+|+|++|...||..||+++++ .|+|+.+.. ..++.++|.++|.++|+|+++++++++++
T Consensus 317 ~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~-~g~g~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~~ 392 (415)
T 3rsc_A 317 CVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQ-LGLGAVLPG---EKADGDTLLAAVGAVAADPALLARVEAMR 392 (415)
T ss_dssp EEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHH-HTCEEECCG---GGCCHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred EEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHH-cCCEEEccc---CCCCHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999 499999876 45899999999999999999999999999
Q ss_pred HHHHhhhhcCCCcHHHHHHHHHHHHHHhh
Q 009851 469 EKAMSSVREGGSSYKTFQNFLQWTMNALK 497 (524)
Q Consensus 469 ~~~~~~~~~~g~~~~~~~~~~~~i~~~~~ 497 (524)
+.+.+ .+| .+++++.|++.++
T Consensus 393 ~~~~~---~~~-----~~~~~~~i~~~~~ 413 (415)
T 3rsc_A 393 GHVRR---AGG-----AARAADAVEAYLA 413 (415)
T ss_dssp HHHHH---SCH-----HHHHHHHHHHHHH
T ss_pred HHHHh---cCH-----HHHHHHHHHHHhh
Confidence 99987 233 6667777776553
No 12
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=1.7e-38 Score=324.59 Aligned_cols=388 Identities=15% Similarity=0.155 Sum_probs=266.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcChhhHHHhhhcCCCCCCCeEEEecCCCCCCC-----CCc
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPW-----EDR 75 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~-----~~~ 75 (524)
|+++||+|++.++.||++|++.||++|+++||+|+|++++.+.+.++.. ++.+..++...+.. ...
T Consensus 2 m~M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~ 72 (402)
T 3ia7_A 2 MRQRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAA---------GAEVVLYKSEFDTFHVPEVVKQ 72 (402)
T ss_dssp CCCCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHT---------TCEEEECCCGGGTSSSSSSSCC
T ss_pred CCCCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHHc---------CCEEEecccccccccccccccc
Confidence 7778999999999999999999999999999999999998777777664 79999887533221 112
Q ss_pred ccHHHHHHH-HHHhccHHHHHHHHHHhcCCCCCccEEEEC-CCchhHHHHHHHcCCceEEEccchHHHHHHHhhcccccc
Q 009851 76 NDLGKLIEK-CLQVMPGKLEELIEEINSREDEKIDCFIAD-GNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLID 153 (524)
Q Consensus 76 ~~~~~~~~~-~~~~~~~~~~~ll~~l~~~~~~~~D~vI~D-~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~~~~ 153 (524)
.+....+.. +.......+.++.+.+++ .+||+||+| ....++..+|+++|||++.+.+.......... .+....
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~-~~~~~~ 148 (402)
T 3ia7_A 73 EDAETQLHLVYVRENVAILRAAEEALGD---NPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHYSL-FKELWK 148 (402)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHTT---CCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTBCH-HHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhc---cCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCccccc-cccccc
Confidence 233343443 444444455666666665 899999999 77778999999999999987643221000000 000000
Q ss_pred cCCCCCCCCCccccCCCCCCCCCCccccccccchhhhheehhhccCCCCCCccccccccCCCCCCCcccccccccCCCch
Q 009851 154 DGIIDSHGMIPCHVIPYFPPANFNFDACHSRSLLYATVIFFVLYSTSGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTS 233 (524)
Q Consensus 154 ~~~~~~~~~~~~~~~~y~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~ 233 (524)
.+.. ..|. .+.+ +...........++... .
T Consensus 149 ~~~~------------~~~~---------------~~~~---------~~~~~~~~~~~~g~~~~-----~--------- 178 (402)
T 3ia7_A 149 SNGQ------------RHPA---------------DVEA---------VHSVLVDLLGKYGVDTP-----V--------- 178 (402)
T ss_dssp HHTC------------CCGG---------------GSHH---------HHHHHHHHHHTTTCCSC-----H---------
T ss_pred cccc------------cChh---------------hHHH---------HHHHHHHHHHHcCCCCC-----h---------
Confidence 0000 0000 0000 00000000000000000 0
Q ss_pred hhHHHHHHHHHHHhcccc-cEEEEcCCcccccccccCCCcccccccccccCCCCCCCCCCccCcchhhHhhhcCCCCceE
Q 009851 234 QKIFFDLLERNTRAMIAV-NFHFCNSTYELESEAFTTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVV 312 (524)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~-~~~l~ns~~~le~~~~~~~~~v~~VGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV 312 (524)
....... +..++...+++++....+..++.+|||+....... .+|+...+++++|
T Consensus 179 -----------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~vGp~~~~~~~~-------------~~~~~~~~~~~~v 234 (402)
T 3ia7_A 179 -----------KEYWDEIEGLTIVFLPKSFQPFAETFDERFAFVGPTLTGRDGQ-------------PGWQPPRPDAPVL 234 (402)
T ss_dssp -----------HHHHTCCCSCEEESSCGGGSTTGGGCCTTEEECCCCCCC-----------------CCCCCSSTTCCEE
T ss_pred -----------hhhhcCCCCeEEEEcChHhCCccccCCCCeEEeCCCCCCcccC-------------CCCcccCCCCCEE
Confidence 0011122 66788888888877555677899999987543211 1234333446799
Q ss_pred EEeecCCCCCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeeEEeccChhhhhcCCCcceEEec
Q 009851 313 YVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSH 392 (524)
Q Consensus 313 ~vs~GS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~vpq~~lL~~~~v~~~ItH 392 (524)
|+++||......+.+..+++++++.+.+++|.++.+.. .+. .+..++|+.+.+|+|+.++|++++ +||||
T Consensus 235 ~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-------~~~-~~~~~~~v~~~~~~~~~~ll~~ad--~~v~~ 304 (402)
T 3ia7_A 235 LVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIGGFLD-------PAV-LGPLPPNVEAHQWIPFHSVLAHAR--ACLTH 304 (402)
T ss_dssp EEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECCTTSC-------GGG-GCSCCTTEEEESCCCHHHHHTTEE--EEEEC
T ss_pred EEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeCCcCC-------hhh-hCCCCCcEEEecCCCHHHHHhhCC--EEEEC
Confidence 99999997777778899999999888899988875411 111 112468899999999999996655 59999
Q ss_pred CChhhHHHHHHcCCceeccCc-ccchhhhHHhhccccceeeEEecCCCCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 009851 393 CGWNSTMEGVSNGIPFLCWPY-FGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKA 471 (524)
Q Consensus 393 gG~gs~~Eal~~GvP~v~~P~-~~DQ~~na~rv~~~lG~G~~~~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~ 471 (524)
||+||+.||+++|+|+|++|. ..||..||.++++ .|+|+.+.. ..++.++|.++|.++|+|++++++++++++.+
T Consensus 305 ~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~-~g~g~~~~~---~~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~ 380 (402)
T 3ia7_A 305 GTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIE-LGLGSVLRP---DQLEPASIREAVERLAADSAVRERVRRMQRDI 380 (402)
T ss_dssp CCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHH-TTSEEECCG---GGCSHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHH-cCCEEEccC---CCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 999999999999999999999 9999999999999 499999876 45899999999999999999999999999998
Q ss_pred HhhhhcCCCcHHHHHHHHHHHHHHhh
Q 009851 472 MSSVREGGSSYKTFQNFLQWTMNALK 497 (524)
Q Consensus 472 ~~~~~~~g~~~~~~~~~~~~i~~~~~ 497 (524)
.+ +++ .+++++.|++.++
T Consensus 381 ~~----~~~----~~~~~~~i~~~~~ 398 (402)
T 3ia7_A 381 LS----SGG----PARAADEVEAYLG 398 (402)
T ss_dssp HT----SCH----HHHHHHHHHHHHH
T ss_pred hh----CCh----HHHHHHHHHHHHh
Confidence 76 332 5666666666654
No 13
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1e-37 Score=321.99 Aligned_cols=382 Identities=17% Similarity=0.183 Sum_probs=260.5
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcChhhHHHhhhcCCCCCCCeEEEecCCCCCCCCC-----c
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWED-----R 75 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~-----~ 75 (524)
|+++||+|++.++.||++|++.||++|+++||+|+++++....+.+.+ .+++++.++...+.... .
T Consensus 5 m~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~~~~~~~ 75 (430)
T 2iyf_A 5 TTPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAA---------TGPRPVLYHSTLPGPDADPEAWG 75 (430)
T ss_dssp ---CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHT---------TSCEEEECCCCSCCTTSCGGGGC
T ss_pred cccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHh---------CCCEEEEcCCcCccccccccccc
Confidence 445799999999999999999999999999999999999887666554 37899988865432210 1
Q ss_pred ccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEECCCchhHHHHHHHcCCceEEEccchHHHHHHHhhcccccccC
Q 009851 76 NDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDDG 155 (524)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~ 155 (524)
.+....+..+...+...+..+.+.+++ .+||+||+|...+++..+|+.+|||++.+.+........ ...+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~-~~~~~----- 146 (430)
T 2iyf_A 76 STLLDNVEPFLNDAIQALPQLADAYAD---DIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGY-EEEVA----- 146 (430)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHTT---SCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTH-HHHTH-----
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhc---cCCCEEEECCccHHHHHHHHHcCCCEEEEeccccccccc-ccccc-----
Confidence 233333333333334445556666555 799999999887789999999999999887543200000 00000
Q ss_pred CCCCCCCCccccCCCCCCCCCCccccccccchhhhheehhhccCCCCCCccccccccCCCCCCCcccccccccCCCchhh
Q 009851 156 IIDSHGMIPCHVIPYFPPANFNFDACHSRSLLYATVIFFVLYSTSGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQK 235 (524)
Q Consensus 156 ~~~~~~~~~~~~~~y~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~ 235 (524)
...+....+.+. .. . ...
T Consensus 147 --------------------------------------------------~~~~~~~~~~~~-----~~--~-----~~~ 164 (430)
T 2iyf_A 147 --------------------------------------------------EPMWREPRQTER-----GR--A-----YYA 164 (430)
T ss_dssp --------------------------------------------------HHHHHHHHHSHH-----HH--H-----HHH
T ss_pred --------------------------------------------------cchhhhhccchH-----HH--H-----HHH
Confidence 000000000000 00 0 000
Q ss_pred HHHHHHHH------HHHhcccccEEEEcCCcccccccccCCCc-ccccccccccCCCCCCCCCCccCcchhhHhhhcCCC
Q 009851 236 IFFDLLER------NTRAMIAVNFHFCNSTYELESEAFTTFPE-LLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQP 308 (524)
Q Consensus 236 ~~~~~~~~------~~~~~~~~~~~l~ns~~~le~~~~~~~~~-v~~VGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 308 (524)
...+...+ .......++.+++++.+.+++....++++ +++|||........ .+|.+..++
T Consensus 165 ~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~vG~~~~~~~~~-------------~~~~~~~~~ 231 (430)
T 2iyf_A 165 RFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHADRVDEDVYTFVGACQGDRAEE-------------GGWQRPAGA 231 (430)
T ss_dssp HHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTTGGGSCTTTEEECCCCC-----C-------------CCCCCCTTC
T ss_pred HHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCCcccCCCccEEEeCCcCCCCCCC-------------CCCccccCC
Confidence 00000000 00011246789999999998764456677 99999865422110 134433344
Q ss_pred CceEEEeecCCCCCCHHHHHHHHHHHhcC-CCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeeEEeccChhhhhcCCCcc
Q 009851 309 SSVVYVSFGSFTILDQVQFQELALGLELC-KRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIA 387 (524)
Q Consensus 309 ~~vV~vs~GS~~~~~~~~~~~l~~al~~~-~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~vpq~~lL~~~~v~ 387 (524)
+++||+++||......+.+..++++++.. +.+++|.++.+.. .+.+ +..++|+.+.+|+||.++|+++++
T Consensus 232 ~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~-------~~~l-~~~~~~v~~~~~~~~~~~l~~ad~- 302 (430)
T 2iyf_A 232 EKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIGRKVT-------PAEL-GELPDNVEVHDWVPQLAILRQADL- 302 (430)
T ss_dssp SEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC---C-------GGGG-CSCCTTEEEESSCCHHHHHTTCSE-
T ss_pred CCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeCCCCC-------hHHh-ccCCCCeEEEecCCHHHHhhccCE-
Confidence 67999999998755677888899999885 7889888875411 1111 124678999999999999987776
Q ss_pred eEEecCChhhHHHHHHcCCceeccCcccchhhhHHhhccccceeeEEecCCCCCCCHHHHHHHHHHHhcCHHHHHHHHHH
Q 009851 388 CFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARALEL 467 (524)
Q Consensus 388 ~~ItHgG~gs~~Eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~~~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l 467 (524)
||||||+||+.||+++|+|+|++|..+||..|++++++ .|+|+.+.. ..++.++|.++|.++++|++++++++++
T Consensus 303 -~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~-~g~g~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~ 377 (430)
T 2iyf_A 303 -FVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQG-LGVARKLAT---EEATADLLRETALALVDDPEVARRLRRI 377 (430)
T ss_dssp -EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-TTSEEECCC---C-CCHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred -EEECCCccHHHHHHHhCCCEEECCCccchHHHHHHHHH-cCCEEEcCC---CCCCHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999998 599998865 4579999999999999999999999999
Q ss_pred HHHHHhhhhcCCCcHHHHHHHHHHHHHHhh
Q 009851 468 KEKAMSSVREGGSSYKTFQNFLQWTMNALK 497 (524)
Q Consensus 468 ~~~~~~~~~~~g~~~~~~~~~~~~i~~~~~ 497 (524)
++++++. +| .+++++.+++.++
T Consensus 378 ~~~~~~~---~~-----~~~~~~~i~~~~~ 399 (430)
T 2iyf_A 378 QAEMAQE---GG-----TRRAADLIEAELP 399 (430)
T ss_dssp HHHHHHH---CH-----HHHHHHHHHTTSC
T ss_pred HHHHHhc---Cc-----HHHHHHHHHHHhh
Confidence 9988762 33 6777777777665
No 14
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=2.8e-37 Score=313.91 Aligned_cols=353 Identities=14% Similarity=0.102 Sum_probs=252.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcChhhHHHhhhcCCCCCCCeEEEecCCCCCCC----------C
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPW----------E 73 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~----------~ 73 (524)
+||++++.++.||++|++.||++|+++||+|++++++...+.++.. +++++.++...... .
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTGV---------GLPAVATTDLPIRHFITTDREGRPE 71 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCCEEESCSSCHHHHHHBCTTSCBC
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHhC---------CCEEEEeCCcchHHHHhhhcccCcc
Confidence 4899999999999999999999999999999999998766666553 78888887532000 0
Q ss_pred Cc-c--cHHHHH-HH-HHHhccHHHHHHHHHHhcCCCCCccEEEECCCchhHHHHHHHcCCceEEEccchHHHHHHHhhc
Q 009851 74 DR-N--DLGKLI-EK-CLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVFRI 148 (524)
Q Consensus 74 ~~-~--~~~~~~-~~-~~~~~~~~~~~ll~~l~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~ 148 (524)
.. . .....+ .. +...+...+.++.+.+++ .+||+||+|....++..+|+.+|||++.+...+..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~-------- 140 (384)
T 2p6p_A 72 AIPSDPVAQARFTGRWFARMAASSLPRMLDFSRA---WRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD-------- 140 (384)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC--------
T ss_pred ccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHhc---cCCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc--------
Confidence 00 1 111111 21 222233344555555554 78999999988778889999999999987532100
Q ss_pred ccccccCCCCCCCCCccccCCCCCCCCCCccccccccchhhhheehhhccCCCCCCccccccccCCCCCCCccccccccc
Q 009851 149 PKLIDDGIIDSHGMIPCHVIPYFPPANFNFDACHSRSLLYATVIFFVLYSTSGTPMSMQMFRIAPKMPEMNSRDCFWAHI 228 (524)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~y~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~ 228 (524)
+. .+ .
T Consensus 141 -----------------------~~-------------------------------------------~~-----~---- 145 (384)
T 2p6p_A 141 -----------------------AD-------------------------------------------GI-----H---- 145 (384)
T ss_dssp -----------------------CT-------------------------------------------TT-----H----
T ss_pred -----------------------cc-------------------------------------------hh-----h----
Confidence 00 00 0
Q ss_pred CCCchhhHHHHHHHHHHHh-----cccccEEEEcCCcccccccccCC-CcccccccccccCCCCCCCCCCccCcchhhHh
Q 009851 229 GDWTSQKIFFDLLERNTRA-----MIAVNFHFCNSTYELESEAFTTF-PELLPIGPLLASNRLGNTAGYFWCEDSNCLKW 302 (524)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~ns~~~le~~~~~~~-~~v~~VGp~~~~~~~~~~~~~~~~~~~~l~~~ 302 (524)
..+.....+.... ...++.+++++.+.++++ .+++ +++.+++. . .+.++.+|
T Consensus 146 ------~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~-~--------------~~~~~~~~ 203 (384)
T 2p6p_A 146 ------PGADAELRPELSELGLERLPAPDLFIDICPPSLRPA-NAAPARMMRHVAT-S--------------RQCPLEPW 203 (384)
T ss_dssp ------HHHHHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCT-TSCCCEECCCCCC-C--------------CCCBCCHH
T ss_pred ------HHHHHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCC-CCCCCCceEecCC-C--------------CCCCCCch
Confidence 0000000000000 112578899999998875 3333 23444421 1 01223478
Q ss_pred hhcCCCCceEEEeecCCCCC-----CHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeeEEeccCh
Q 009851 303 LDQQQPSSVVYVSFGSFTIL-----DQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQ 377 (524)
Q Consensus 303 l~~~~~~~vV~vs~GS~~~~-----~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~vpq 377 (524)
++..+++++||+++||.... +.+.+..+++++++.+.+++|+.+.. . .+.+ +..++|+.+ +|+||
T Consensus 204 l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~----~----~~~l-~~~~~~v~~-~~~~~ 273 (384)
T 2p6p_A 204 MYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIVAAPDT----V----AEAL-RAEVPQARV-GWTPL 273 (384)
T ss_dssp HHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEEEECCHH----H----HHHH-HHHCTTSEE-ECCCH
T ss_pred hhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEEEEeCCC----C----HHhh-CCCCCceEE-cCCCH
Confidence 87644467999999998654 45678889999988899999987532 0 1112 235789999 99999
Q ss_pred hhhhcCCCcceEEecCChhhHHHHHHcCCceeccCcccchhhhHHhhccccceeeEEecCCCCCCCHHHHHHHHHHHhcC
Q 009851 378 LRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGN 457 (524)
Q Consensus 378 ~~lL~~~~v~~~ItHgG~gs~~Eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~~~~~~~~~~t~~~l~~ai~~~l~~ 457 (524)
.++|++ +++||||||+||+.||+++|+|+|++|...||..||+++++ .|+|+.++. ..++.++|.++|.++|+|
T Consensus 274 ~~~l~~--~d~~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~-~g~g~~~~~---~~~~~~~l~~~i~~ll~~ 347 (384)
T 2p6p_A 274 DVVAPT--CDLLVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRVAD-YGAAIALLP---GEDSTEAIADSCQELQAK 347 (384)
T ss_dssp HHHGGG--CSEEEECSCTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-HTSEEECCT---TCCCHHHHHHHHHHHHHC
T ss_pred HHHHhh--CCEEEeCCcHHHHHHHHHhCCCEEEccCcccchHHHHHHHH-CCCeEecCc---CCCCHHHHHHHHHHHHcC
Confidence 999955 55599999999999999999999999999999999999998 599998865 457999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHHhh
Q 009851 458 QDFKARALELKEKAMSSVREGGSSYKTFQNFLQWTMNALK 497 (524)
Q Consensus 458 ~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~i~~~~~ 497 (524)
++++++++++++++++ .+| .++++++|+..+-
T Consensus 348 ~~~~~~~~~~~~~~~~---~~~-----~~~~~~~i~~~~~ 379 (384)
T 2p6p_A 348 DTYARRAQDLSREISG---MPL-----PATVVTALEQLAH 379 (384)
T ss_dssp HHHHHHHHHHHHHHHT---SCC-----HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh---CCC-----HHHHHHHHHHHhh
Confidence 9999999999999998 355 8888888888764
No 15
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=8.3e-38 Score=323.73 Aligned_cols=375 Identities=13% Similarity=0.126 Sum_probs=247.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcChhhHHHhhhcCCCCCCCeEEEecCCCCCC-C---------
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEP-W--------- 72 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~-~--------- 72 (524)
++||+|++.++.||++|++.||++|+++||+|+|++++...+.+++. |++++.++..... .
T Consensus 20 ~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~~---------G~~~~~i~~~~~~~~~~~~~~~~~ 90 (441)
T 2yjn_A 20 HMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITAA---------GLTAVPVGTDVDLVDFMTHAGHDI 90 (441)
T ss_dssp CCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHTT---------TCCEEECSCCCCHHHHHHHTTHHH
T ss_pred ccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHhC---------CCceeecCCccchHHHhhhhhccc
Confidence 57999999999999999999999999999999999998877767654 8999988864310 0
Q ss_pred -------C-----Cc-ccHH---HHHHHHHHh----c-cH-HHHHHHHHHhcCCCCCccEEEECCCchhHHHHHHHcCCc
Q 009851 73 -------E-----DR-NDLG---KLIEKCLQV----M-PG-KLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVR 130 (524)
Q Consensus 73 -------~-----~~-~~~~---~~~~~~~~~----~-~~-~~~~ll~~l~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP 130 (524)
. .. ..+. .....+... . .. .+.++++.+++ .+||+||+|..+.++..+|+.+|||
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~pDlVv~d~~~~~~~~aA~~lgiP 167 (441)
T 2yjn_A 91 IDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRK---WRPDLVIWEPLTFAAPIAAAVTGTP 167 (441)
T ss_dssp HHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHH---HCCSEEEECTTCTHHHHHHHHHTCC
T ss_pred ccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHh---cCCCEEEecCcchhHHHHHHHcCCC
Confidence 0 00 0111 111112111 1 13 66677666655 7999999999878999999999999
Q ss_pred eEEEccchHHHHHHHhhcccccccCCCCCCCCCccccCCCCCCCCCCccccccccchhhhheehhhccCCCCCCcccccc
Q 009851 131 GAVFWPSSAASVALVFRIPKLIDDGIIDSHGMIPCHVIPYFPPANFNFDACHSRSLLYATVIFFVLYSTSGTPMSMQMFR 210 (524)
Q Consensus 131 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (524)
++.+...+........... ..+++.|...+ +
T Consensus 168 ~v~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~--~------------------------------- 198 (441)
T 2yjn_A 168 HARLLWGPDITTRARQNFL----------------GLLPDQPEEHR--E------------------------------- 198 (441)
T ss_dssp EEEECSSCCHHHHHHHHHH----------------HHGGGSCTTTC--C-------------------------------
T ss_pred EEEEecCCCcchhhhhhhh----------------hhccccccccc--c-------------------------------
Confidence 9998654322111000000 00011111000 0
Q ss_pred ccCCCCCCCcccccccccCCCchhhHHHHHHHHHHH-----hcccccEEEEcCCcccccccccCC-CcccccccccccCC
Q 009851 211 IAPKMPEMNSRDCFWAHIGDWTSQKIFFDLLERNTR-----AMIAVNFHFCNSTYELESEAFTTF-PELLPIGPLLASNR 284 (524)
Q Consensus 211 ~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~ns~~~le~~~~~~~-~~v~~VGp~~~~~~ 284 (524)
....+.+.....+... .....+.++.++.+.++++ ..++ ..+.++++ .
T Consensus 199 --------------------~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~---~-- 252 (441)
T 2yjn_A 199 --------------------DPLAEWLTWTLEKYGGPAFDEEVVVGQWTIDPAPAAIRLD-TGLKTVGMRYVDY---N-- 252 (441)
T ss_dssp --------------------CHHHHHHHHHHHHTTCCCCCGGGTSCSSEEECSCGGGSCC-CCCCEEECCCCCC---C--
T ss_pred --------------------chHHHHHHHHHHHcCCCCCCccccCCCeEEEecCccccCC-CCCCCCceeeeCC---C--
Confidence 0000000000000000 0001344566666666543 2222 12222211 0
Q ss_pred CCCCCCCCccCcchhhHhhhcCCCCceEEEeecCCCCC---CHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCChhh
Q 009851 285 LGNTAGYFWCEDSNCLKWLDQQQPSSVVYVSFGSFTIL---DQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGF 361 (524)
Q Consensus 285 ~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~GS~~~~---~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~ 361 (524)
.+.++.+|++..+++++|||++||.... ..+.+..+++++++.+.+++|+.+.. ..+.+.
T Consensus 253 ----------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~----~~~~l~--- 315 (441)
T 2yjn_A 253 ----------GPSVVPEWLHDEPERRRVCLTLGISSRENSIGQVSIEELLGAVGDVDAEIIATFDAQ----QLEGVA--- 315 (441)
T ss_dssp ----------SSCCCCGGGSSCCSSCEEEEEC----------CCSTTTTHHHHHTSSSEEEECCCTT----TTSSCS---
T ss_pred ----------CCcccchHhhcCCCCCEEEEECCCCcccccChHHHHHHHHHHHHcCCCEEEEEECCc----chhhhc---
Confidence 1123347887655577999999998653 23456778899988899999988744 111121
Q ss_pred HHhhcCCeeEEeccChhhhhcCCCcceEEecCChhhHHHHHHcCCceeccCcccchhhhHHhhccccceeeEEecCCCCC
Q 009851 362 QERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGI 441 (524)
Q Consensus 362 ~~~~~~n~~v~~~vpq~~lL~~~~v~~~ItHgG~gs~~Eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~~~~~~~~~ 441 (524)
..++|+.+.+|+||.++| +++++||||||+||++||+++|||+|++|...||..||+++++ .|+|+.++. ..
T Consensus 316 --~~~~~v~~~~~~~~~~ll--~~ad~~V~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~---~~ 387 (441)
T 2yjn_A 316 --NIPDNVRTVGFVPMHALL--PTCAATVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQE-FGAGIALPV---PE 387 (441)
T ss_dssp --SCCSSEEECCSCCHHHHG--GGCSEEEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-HTSEEECCT---TT
T ss_pred --cCCCCEEEecCCCHHHHH--hhCCEEEECCCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHH-cCCEEEccc---cc
Confidence 246789999999999999 5555599999999999999999999999999999999999999 599999875 56
Q ss_pred CCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHHhh
Q 009851 442 ITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWTMNALK 497 (524)
Q Consensus 442 ~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~i~~~~~ 497 (524)
++.++|.++|.++|+|++++++++++++.+++ .+| .+++++.|++.++
T Consensus 388 ~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~---~~~-----~~~~~~~i~~~~~ 435 (441)
T 2yjn_A 388 LTPDQLRESVKRVLDDPAHRAGAARMRDDMLA---EPS-----PAEVVGICEELAA 435 (441)
T ss_dssp CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHT---SCC-----HHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHc---CCC-----HHHHHHHHHHHHH
Confidence 89999999999999999999999999999987 355 6777777777665
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=2.2e-35 Score=301.49 Aligned_cols=346 Identities=11% Similarity=0.108 Sum_probs=220.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcChhhHHHhhhcCCCCCCCeEEEecCCCCC---------CC-
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGME---------PW- 72 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~---------~~- 72 (524)
++||+|++.++.||++|++.||++|+++||+|++++++...+.+.+. ++.++.++.... ..
T Consensus 15 ~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~~~ 85 (398)
T 4fzr_A 15 HMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTGA---------GLPFAPTCPSLDMPEVLSWDREGN 85 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHHT---------TCCEEEEESSCCHHHHHSBCTTSC
T ss_pred ceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHhC---------CCeeEecCCccchHhhhhhhccCc
Confidence 57999999999999999999999999999999999998877777664 777777763110 00
Q ss_pred --CCcccH----HHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEECCCchhHHHHHHHcCCceEEEccchHHHHHHHh
Q 009851 73 --EDRNDL----GKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVALVF 146 (524)
Q Consensus 73 --~~~~~~----~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~ 146 (524)
...... ......+.......++++.+.+++ .+||+||+|...+++..+|+.+|||++.+............
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~~~ 162 (398)
T 4fzr_A 86 RTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAER---WKPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELIKS 162 (398)
T ss_dssp BCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHHHH
T ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh---CCCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhhhH
Confidence 000011 111122222233344455554544 78999999987788999999999999987654211000000
Q ss_pred hcccccccCCCCCCCCCccccCCCCCCCCCCccccccccchhhhheehhhccCCCCCCccccccccCCCCCCCccccccc
Q 009851 147 RIPKLIDDGIIDSHGMIPCHVIPYFPPANFNFDACHSRSLLYATVIFFVLYSTSGTPMSMQMFRIAPKMPEMNSRDCFWA 226 (524)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~y~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~ 226 (524)
. .+.++...+.. .++..
T Consensus 163 ~-----------------------------------------~~~~l~~~~~~-------------~~~~~--------- 179 (398)
T 4fzr_A 163 A-----------------------------------------GVGELAPELAE-------------LGLTD--------- 179 (398)
T ss_dssp H-----------------------------------------HHHHTHHHHHT-------------TTCSS---------
T ss_pred H-----------------------------------------HHHHHHHHHHH-------------cCCCC---------
Confidence 0 00000000000 00000
Q ss_pred ccCCCchhhHHHHHHHHHHHhcccccEEEEcCCcccccccccCCCcccccccccccCCCCCCCCCCccCcchhhHhhhcC
Q 009851 227 HIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQ 306 (524)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~v~~VGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 306 (524)
....+..+....+.++.........+.++++.. ...++.+|+...
T Consensus 180 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~ 224 (398)
T 4fzr_A 180 ---------------------FPDPLLSIDVCPPSMEAQPKPGTTKMRYVPYNG--------------RNDQVPSWVFEE 224 (398)
T ss_dssp ---------------------CCCCSEEEECSCGGGC----CCCEECCCCCCCC--------------SSCCCCHHHHSC
T ss_pred ---------------------CCCCCeEEEeCChhhCCCCCCCCCCeeeeCCCC--------------CCCCCchhhhcC
Confidence 011233444445555433111111122222110 112233677655
Q ss_pred CCCceEEEeecCCCCC--------CHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeeEEeccChh
Q 009851 307 QPSSVVYVSFGSFTIL--------DQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQL 378 (524)
Q Consensus 307 ~~~~vV~vs~GS~~~~--------~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~vpq~ 378 (524)
+++++||+++||.... ..+.+..+++++++.+.+++|+.+... .+.+ +..++|+.+.+|+|+.
T Consensus 225 ~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~--------~~~l-~~~~~~v~~~~~~~~~ 295 (398)
T 4fzr_A 225 RKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKLGFEVVVAVSDKL--------AQTL-QPLPEGVLAAGQFPLS 295 (398)
T ss_dssp CSSCEEECC----------------CCSHHHHHHHGGGGTCEEEECCCC-----------------CCTTEEEESCCCHH
T ss_pred CCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhCCCEEEEEeCCcc--------hhhh-ccCCCcEEEeCcCCHH
Confidence 5577999999998543 234578899999988999998876541 1111 1357899999999999
Q ss_pred hhhcCCCcceEEecCChhhHHHHHHcCCceeccCcccchhhhHHhhccccceeeEEecCCCCCCCHHHHHHHHHHHhcCH
Q 009851 379 RVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQ 458 (524)
Q Consensus 379 ~lL~~~~v~~~ItHgG~gs~~Eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~~~~~~~~~~t~~~l~~ai~~~l~~~ 458 (524)
++|+++++ ||||||.||+.||+++|+|+|++|...||..|+.++++. |+|+.++. ..++.++|.++|.++|+|+
T Consensus 296 ~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~-g~g~~~~~---~~~~~~~l~~ai~~ll~~~ 369 (398)
T 4fzr_A 296 AIMPACDV--VVHHGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAA-GAGVEVPW---EQAGVESVLAACARIRDDS 369 (398)
T ss_dssp HHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHT-TSEEECC----------CHHHHHHHHHHCT
T ss_pred HHHhhCCE--EEecCCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHHc-CCEEecCc---ccCCHHHHHHHHHHHHhCH
Confidence 99977555 999999999999999999999999999999999999994 99999875 4578999999999999999
Q ss_pred HHHHHHHHHHHHHHh
Q 009851 459 DFKARALELKEKAMS 473 (524)
Q Consensus 459 ~~r~~a~~l~~~~~~ 473 (524)
+++++++++++.+++
T Consensus 370 ~~~~~~~~~~~~~~~ 384 (398)
T 4fzr_A 370 SYVGNARRLAAEMAT 384 (398)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHc
Confidence 999999999999987
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=3.6e-34 Score=292.43 Aligned_cols=351 Identities=14% Similarity=0.166 Sum_probs=233.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcChhhHHHhhhcCCCCCCCeEEEecCCCCC------------
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGME------------ 70 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~------------ 70 (524)
++||+|++.++.||++|++.||++|.++||+|+++++ ...+.++.. ++.++.++....
T Consensus 20 ~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~~~ 89 (398)
T 3oti_A 20 HMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAAA---------GLEVVDVAPDYSAVKVFEQVAKDN 89 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHTT---------TCEEEESSTTCCHHHHHHHHHHHC
T ss_pred cCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHhC---------CCeeEecCCccCHHHHhhhcccCC
Confidence 4699999999999999999999999999999999999 777777654 899998885321
Q ss_pred ----------CCCCcccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEECCCchhHHHHHHHcCCceEEEccchHH
Q 009851 71 ----------PWEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAA 140 (524)
Q Consensus 71 ----------~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~ 140 (524)
...........+... ....+.++.+.+++ .+||+||+|...+++..+|+.+|||++.+......
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~l~~---~~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~ 163 (398)
T 3oti_A 90 PRFAETVATRPAIDLEEWGVQIAAV---NRPLVDGTMALVDD---YRPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWR 163 (398)
T ss_dssp HHHHHTGGGSCCCSGGGGHHHHHHH---HGGGHHHHHHHHHH---HCCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCC
T ss_pred ccccccccCChhhhHHHHHHHHHHH---HHHHHHHHHHHHHH---cCCCEEEECchhhHHHHHHHHcCCCEEEEeccCCC
Confidence 011111222222222 22333444444443 78999999988888999999999999986533210
Q ss_pred HHHHHhhcccccccCCCCCCCCCccccCCCCCCCCCCccccccccchhhhheehhhccCCCCCCccccccccCCCCCCCc
Q 009851 141 SVALVFRIPKLIDDGIIDSHGMIPCHVIPYFPPANFNFDACHSRSLLYATVIFFVLYSTSGTPMSMQMFRIAPKMPEMNS 220 (524)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 220 (524)
... .....+.++...+.. .++.
T Consensus 164 ~~~-----------------------------------------~~~~~~~~l~~~~~~-------------~~~~---- 185 (398)
T 3oti_A 164 TRG-----------------------------------------MHRSIASFLTDLMDK-------------HQVS---- 185 (398)
T ss_dssp CTT-----------------------------------------HHHHHHTTCHHHHHH-------------TTCC----
T ss_pred ccc-----------------------------------------hhhHHHHHHHHHHHH-------------cCCC----
Confidence 000 000000000000000 0000
Q ss_pred ccccccccCCCchhhHHHHHHHHHHHhcccccEEEEcCCcccccccccCCCcccccccccccCCCCCCCCCCccCcchhh
Q 009851 221 RDCFWAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELLPIGPLLASNRLGNTAGYFWCEDSNCL 300 (524)
Q Consensus 221 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~v~~VGp~~~~~~~~~~~~~~~~~~~~l~ 300 (524)
....+..+....+.+..+.......+.++ |.. ....+.
T Consensus 186 ---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--------------~~~~~~ 223 (398)
T 3oti_A 186 ---------------------------LPEPVATIESFPPSLLLEAEPEGWFMRWV-PYG--------------GGAVLG 223 (398)
T ss_dssp ---------------------------CCCCSEEECSSCGGGGTTSCCCSBCCCCC-CCC--------------CCEECC
T ss_pred ---------------------------CCCCCeEEEeCCHHHCCCCCCCCCCcccc-CCC--------------CCcCCc
Confidence 01123344444444443210000011121 100 011122
Q ss_pred HhhhcCCCCceEEEeecCCCCC--CHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeeEEeccChh
Q 009851 301 KWLDQQQPSSVVYVSFGSFTIL--DQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQL 378 (524)
Q Consensus 301 ~~l~~~~~~~vV~vs~GS~~~~--~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~vpq~ 378 (524)
+|+...+++++||+++||.... ..+.+..+++++++.+.+++|+.+... .+.+ +..++|+.+.+|+|+.
T Consensus 224 ~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~--------~~~l-~~~~~~v~~~~~~~~~ 294 (398)
T 3oti_A 224 DRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLD--------ISPL-GTLPRNVRAVGWTPLH 294 (398)
T ss_dssp SSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTSC--------CGGG-CSCCTTEEEESSCCHH
T ss_pred hhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCcC--------hhhh-ccCCCcEEEEccCCHH
Confidence 4555444577999999998432 456678899999888999999986541 1111 1346889999999999
Q ss_pred hhhcCCCcceEEecCChhhHHHHHHcCCceeccCcccchhhhH--HhhccccceeeEEecCCCCCCCHHHHHHHHHHHhc
Q 009851 379 RVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNE--RYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLG 456 (524)
Q Consensus 379 ~lL~~~~v~~~ItHgG~gs~~Eal~~GvP~v~~P~~~DQ~~na--~rv~~~lG~G~~~~~~~~~~~t~~~l~~ai~~~l~ 456 (524)
++|+++++ ||||||.||+.||+++|+|+|++|...||..|| .++++ .|+|+.++. ...+++.|. ++|+
T Consensus 295 ~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~-~g~g~~~~~---~~~~~~~l~----~ll~ 364 (398)
T 3oti_A 295 TLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSR-RGIGLVSTS---DKVDADLLR----RLIG 364 (398)
T ss_dssp HHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHH-HTSEEECCG---GGCCHHHHH----HHHH
T ss_pred HHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHH-CCCEEeeCC---CCCCHHHHH----HHHc
Confidence 99977555 999999999999999999999999999999999 99999 599999976 456787777 8889
Q ss_pred CHHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHHh
Q 009851 457 NQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWTMNAL 496 (524)
Q Consensus 457 ~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~i~~~~ 496 (524)
|++++++++++++++.+ +.| .+++++.|++.+
T Consensus 365 ~~~~~~~~~~~~~~~~~---~~~-----~~~~~~~l~~l~ 396 (398)
T 3oti_A 365 DESLRTAAREVREEMVA---LPT-----PAETVRRIVERI 396 (398)
T ss_dssp CHHHHHHHHHHHHHHHT---SCC-----HHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHh---CCC-----HHHHHHHHHHHh
Confidence 99999999999999987 244 666777776654
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=9.3e-33 Score=281.24 Aligned_cols=358 Identities=14% Similarity=0.147 Sum_probs=234.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcChhhHHHhhhcCCCCCCCeEEEec-CCCCC----------C
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSI-PDGME----------P 71 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~i~~~~~-~~~~~----------~ 71 (524)
++||+|++.++.||++|++.||++|+++||+|++++++...+.+... ++.++.+ +.... .
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~~ 71 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHGA---------GLTTAGIRGNDRTGDTGGTTQLRF 71 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHHB---------TCEEEEC--------------CCS
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHhC---------CCceeeecCCccchhhhhhhcccc
Confidence 46999999999999999999999999999999999987766666654 7888777 32110 0
Q ss_pred CCC---cccHHHHHHHHHHhccHH-------HHHHHHHHhcCCCCCccEEEECCCchhHHHHHHHcCCceEEEccchHHH
Q 009851 72 WED---RNDLGKLIEKCLQVMPGK-------LEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAAS 141 (524)
Q Consensus 72 ~~~---~~~~~~~~~~~~~~~~~~-------~~~ll~~l~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~ 141 (524)
... ..........+....... +.++.+.++. .+||+||+|...+++..+|+.+|||++.+.......
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~ 148 (391)
T 3tsa_A 72 PNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEA---WRPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPT 148 (391)
T ss_dssp CCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCCT
T ss_pred cccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHh---cCCCEEEeCcchhHHHHHHHHhCCCEEEEecCCccc
Confidence 000 000011111111111122 4444444444 799999999877788889999999999875332100
Q ss_pred HHHHhhcccccccCCCCCCCCCccccCCCCCCCCCCccccccccchhhhheehhhccCCCCCCccccccccCCCCCCCcc
Q 009851 142 VALVFRIPKLIDDGIIDSHGMIPCHVIPYFPPANFNFDACHSRSLLYATVIFFVLYSTSGTPMSMQMFRIAPKMPEMNSR 221 (524)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 221 (524)
..
T Consensus 149 ~~------------------------------------------------------------------------------ 150 (391)
T 3tsa_A 149 AG------------------------------------------------------------------------------ 150 (391)
T ss_dssp TT------------------------------------------------------------------------------
T ss_pred cc------------------------------------------------------------------------------
Confidence 00
Q ss_pred cccccccCCCchhhHHHHHHHHHHHhc-----ccccEEEEcCCcccccccccCCCcccccccccccCCCCCCCCCCccCc
Q 009851 222 DCFWAHIGDWTSQKIFFDLLERNTRAM-----IAVNFHFCNSTYELESEAFTTFPELLPIGPLLASNRLGNTAGYFWCED 296 (524)
Q Consensus 222 ~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~ns~~~le~~~~~~~~~v~~VGp~~~~~~~~~~~~~~~~~~ 296 (524)
.........+.+..... ...+.++..+.++++.........+.++ |.. ..
T Consensus 151 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~--------------~~ 205 (391)
T 3tsa_A 151 ----------PFSDRAHELLDPVCRHHGLTGLPTPELILDPCPPSLQASDAPQGAPVQYV-PYN--------------GS 205 (391)
T ss_dssp ----------HHHHHHHHHHHHHHHHTTSSSSCCCSEEEECSCGGGSCTTSCCCEECCCC-CCC--------------CC
T ss_pred ----------cccchHHHHHHHHHHHcCCCCCCCCceEEEecChhhcCCCCCccCCeeee-cCC--------------CC
Confidence 00000000011111110 1224556666666654411111123333 111 11
Q ss_pred chhhHhhhcCCCCceEEEeecCCCC---CCHHHHHHHHHHHhcC-CCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeeEE
Q 009851 297 SNCLKWLDQQQPSSVVYVSFGSFTI---LDQVQFQELALGLELC-KRPFLWVVRPDITTDANDRYPEGFQERVAARGQMI 372 (524)
Q Consensus 297 ~~l~~~l~~~~~~~vV~vs~GS~~~---~~~~~~~~l~~al~~~-~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~ 372 (524)
..+.+|+...+++++|++++||... ...+.+..++++ ++. +.+++|..+.. ..+.+. ..++|+.+.
T Consensus 206 ~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~----~~~~l~-----~~~~~v~~~ 275 (391)
T 3tsa_A 206 GAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVEAVIAVPPE----HRALLT-----DLPDNARIA 275 (391)
T ss_dssp EECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEEEEEECCGG----GGGGCT-----TCCTTEEEC
T ss_pred cCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeEEEEEECCc----chhhcc-----cCCCCEEEe
Confidence 1122566554557799999999732 236677788888 777 77888887643 111111 246789999
Q ss_pred eccChhhhhcCCCcceEEecCChhhHHHHHHcCCceeccCcccchhhhHHhhccccceeeEEecCCCCCCCHHHHHHHHH
Q 009851 373 SWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVD 452 (524)
Q Consensus 373 ~~vpq~~lL~~~~v~~~ItHgG~gs~~Eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~~~~~~~~~~t~~~l~~ai~ 452 (524)
+|+|+.++|+ .+++||||||.||+.||+++|+|+|++|...||..|+.++++. |+|+.+... -...+.++|.++|.
T Consensus 276 ~~~~~~~ll~--~ad~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~-g~g~~~~~~-~~~~~~~~l~~ai~ 351 (391)
T 3tsa_A 276 ESVPLNLFLR--TCELVICAGGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAA-GAGICLPDE-QAQSDHEQFTDSIA 351 (391)
T ss_dssp CSCCGGGTGG--GCSEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHT-TSEEECCSH-HHHTCHHHHHHHHH
T ss_pred ccCCHHHHHh--hCCEEEeCCCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHc-CCEEecCcc-cccCCHHHHHHHHH
Confidence 9999999994 5555999999999999999999999999999999999999994 999988530 01278999999999
Q ss_pred HHhcCHHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHHhh
Q 009851 453 QVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWTMNALK 497 (524)
Q Consensus 453 ~~l~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~i~~~~~ 497 (524)
++|+|++++++++++++.+.+ .++ .+++++.|++.++
T Consensus 352 ~ll~~~~~~~~~~~~~~~~~~---~~~-----~~~~~~~i~~~~~ 388 (391)
T 3tsa_A 352 TVLGDTGFAAAAIKLSDEITA---MPH-----PAALVRTLENTAA 388 (391)
T ss_dssp HHHTCTHHHHHHHHHHHHHHT---SCC-----HHHHHHHHHHC--
T ss_pred HHHcCHHHHHHHHHHHHHHHc---CCC-----HHHHHHHHHHHHh
Confidence 999999999999999999876 244 5667777776543
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.98 E-value=2.6e-30 Score=264.91 Aligned_cols=367 Identities=17% Similarity=0.161 Sum_probs=241.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcChhhHHHhhhcCCCCCCCeEEEecCCCC------------C
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGM------------E 70 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~i~~~~~~~~~------------~ 70 (524)
++||+|++.++.||++|++.||++|+++||+|++++++...+.+... ++.++.++... .
T Consensus 20 ~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~~ 90 (412)
T 3otg_A 20 HMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRKL---------GFEPVATGMPVFDGFLAALRIRFD 90 (412)
T ss_dssp SCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCEEEECCCCHHHHHHHHHHHHHS
T ss_pred eeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHhc---------CCceeecCcccccchhhhhhhhhc
Confidence 57999999999999999999999999999999999998766655553 88998887410 0
Q ss_pred C-CCCcccHH----HHHHHHHHh-ccHHHHHHHHHHhcCCCCCccEEEECCCchhHHHHHHHcCCceEEEccchHHHHHH
Q 009851 71 P-WEDRNDLG----KLIEKCLQV-MPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAASVAL 144 (524)
Q Consensus 71 ~-~~~~~~~~----~~~~~~~~~-~~~~~~~ll~~l~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~ 144 (524)
. ........ .....+... ....+..+.+.++. .+||+||+|....++..+|+.+|||++.+..........
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~~~~~ 167 (412)
T 3otg_A 91 TDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIER---LRPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTPDDL 167 (412)
T ss_dssp CSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHH---HCCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCCCSHH
T ss_pred ccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHh---cCCCEEEECchhhHHHHHHHHcCCCEEEecccccCchhh
Confidence 0 00000011 111111111 11222333333333 799999999877788889999999999865432100000
Q ss_pred HhhcccccccCCCCCCCCCccccCCCCCCCCCCccccccccchhhhheehhhccCCCCCCccccccccCCCCCCCccccc
Q 009851 145 VFRIPKLIDDGIIDSHGMIPCHVIPYFPPANFNFDACHSRSLLYATVIFFVLYSTSGTPMSMQMFRIAPKMPEMNSRDCF 224 (524)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~y~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 224 (524)
....+.++..++.. .+++.... .
T Consensus 168 -----------------------------------------~~~~~~~~~~~~~~-------------~g~~~~~~--~- 190 (412)
T 3otg_A 168 -----------------------------------------TRSIEEEVRGLAQR-------------LGLDLPPG--R- 190 (412)
T ss_dssp -----------------------------------------HHHHHHHHHHHHHH-------------TTCCCCSS--C-
T ss_pred -----------------------------------------hHHHHHHHHHHHHH-------------cCCCCCcc--c-
Confidence 00000000000000 01100000 0
Q ss_pred ccccCCCchhhHHHHHHHHHHHhcccccEEEEcCCcccccccccCCCc---ccccccccccCCCCCCCCCCccCcchhhH
Q 009851 225 WAHIGDWTSQKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPE---LLPIGPLLASNRLGNTAGYFWCEDSNCLK 301 (524)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~---v~~VGp~~~~~~~~~~~~~~~~~~~~l~~ 301 (524)
....++.++..+...++......... +.++++- ......+
T Consensus 191 ----------------------~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~ 233 (412)
T 3otg_A 191 ----------------------IDGFGNPFIDIFPPSLQEPEFRARPRRHELRPVPFA---------------EQGDLPA 233 (412)
T ss_dssp ----------------------CGGGGCCEEECSCGGGSCHHHHTCTTEEECCCCCCC---------------CCCCCCG
T ss_pred ----------------------ccCCCCeEEeeCCHHhcCCcccCCCCcceeeccCCC---------------CCCCCCC
Confidence 01234556666666665442111111 1111110 1111224
Q ss_pred h-hhcCCCCceEEEeecCCCCCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeeEEeccChhhh
Q 009851 302 W-LDQQQPSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRV 380 (524)
Q Consensus 302 ~-l~~~~~~~vV~vs~GS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~vpq~~l 380 (524)
| ....+++++|++++||......+.+..+++++++.+.+++|..+.+.. .+.+. ..++|+.+.+|+|+.++
T Consensus 234 ~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~---~~~l~-----~~~~~v~~~~~~~~~~~ 305 (412)
T 3otg_A 234 WLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDGLAGLDADVLVASGPSLD---VSGLG-----EVPANVRLESWVPQAAL 305 (412)
T ss_dssp GGGGSCTTSCEEEEECTTTTCSCHHHHHHHHHHHHTSSSEEEEECCSSCC---CTTCC-----CCCTTEEEESCCCHHHH
T ss_pred ccccccCCCCEEEEEcCCCCcCcHHHHHHHHHHHHcCCCEEEEEECCCCC---hhhhc-----cCCCcEEEeCCCCHHHH
Confidence 5 222334669999999987566788888999998889999998876521 11111 24678999999999999
Q ss_pred hcCCCcceEEecCChhhHHHHHHcCCceeccCcccchhhhHHhhccccceeeEEecCCCCCCCHHHHHHHHHHHhcCHHH
Q 009851 381 LNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDF 460 (524)
Q Consensus 381 L~~~~v~~~ItHgG~gs~~Eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~~~~~~~~~~t~~~l~~ai~~~l~~~~~ 460 (524)
|+++++ ||+|||.||+.||+++|+|+|++|...||..|+.++++. |.|..+.. ..+++++|.++|.++|+|+++
T Consensus 306 l~~ad~--~v~~~g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~-g~g~~~~~---~~~~~~~l~~ai~~ll~~~~~ 379 (412)
T 3otg_A 306 LPHVDL--VVHHGGSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQA-GAGDHLLP---DNISPDSVSGAAKRLLAEESY 379 (412)
T ss_dssp GGGCSE--EEESCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHH-TSEEECCG---GGCCHHHHHHHHHHHHHCHHH
T ss_pred HhcCcE--EEECCchHHHHHHHHhCCCEEecCCchhHHHHHHHHHHc-CCEEecCc---ccCCHHHHHHHHHHHHhCHHH
Confidence 977666 999999999999999999999999999999999999995 99999976 457999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHHhh
Q 009851 461 KARALELKEKAMSSVREGGSSYKTFQNFLQWTMNALK 497 (524)
Q Consensus 461 r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~i~~~~~ 497 (524)
++++.+.++++.+ +++ .+++++.+++.++
T Consensus 380 ~~~~~~~~~~~~~---~~~-----~~~~~~~~~~l~~ 408 (412)
T 3otg_A 380 RAGARAVAAEIAA---MPG-----PDEVVRLLPGFAS 408 (412)
T ss_dssp HHHHHHHHHHHHH---SCC-----HHHHHTTHHHHHC
T ss_pred HHHHHHHHHHHhc---CCC-----HHHHHHHHHHHhc
Confidence 9999999988876 233 6666666666653
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.95 E-value=9.3e-27 Score=234.17 Aligned_cols=339 Identities=13% Similarity=0.105 Sum_probs=204.9
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcCh--hhHHHhhhcCCCCCCCeEEEecCCC-CCCCC---Cc
Q 009851 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNH--KRVVESLQGKNYLGEQIHLVSIPDG-MEPWE---DR 75 (524)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~--~~i~~~~~~~~~~~~~i~~~~~~~~-~~~~~---~~ 75 (524)
=+.||+|...|+.||++|.++||++|.++||+|+|+++.... +.+.+. ++.++.++.. +.... ..
T Consensus 1 M~~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~---------g~~~~~i~~~~~~~~~~~~~~ 71 (365)
T 3s2u_A 1 MKGNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKA---------GLPLHLIQVSGLRGKGLKSLV 71 (365)
T ss_dssp --CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGG---------TCCEEECC-------------
T ss_pred CCCcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhc---------CCcEEEEECCCcCCCCHHHHH
Confidence 045899999888899999999999999999999999976542 233333 7888877632 22110 11
Q ss_pred ccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEECCCch--hHHHHHHHcCCceEEEccchHHHHHHHhhcccccc
Q 009851 76 NDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG--WSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLID 153 (524)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~D~vI~D~~~~--~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~~~~ 153 (524)
..+..++..+. ....++++ .+||+||++.... .+..+|+.+|||++..-.
T Consensus 72 ~~~~~~~~~~~-----~~~~~l~~------~~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~----------------- 123 (365)
T 3s2u_A 72 KAPLELLKSLF-----QALRVIRQ------LRPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQ----------------- 123 (365)
T ss_dssp -CHHHHHHHHH-----HHHHHHHH------HCCSEEEECSSSTHHHHHHHHHHTTCCEEEEEC-----------------
T ss_pred HHHHHHHHHHH-----HHHHHHHh------cCCCEEEEcCCcchHHHHHHHHHcCCCEEEEec-----------------
Confidence 11111111111 12345555 7999999997555 456778999999986310
Q ss_pred cCCCCCCCCCccccCCCCCCCCCCccccccccchhhhheehhhccCCCCCCccccccccCCCCCCCcccccccccCCCch
Q 009851 154 DGIIDSHGMIPCHVIPYFPPANFNFDACHSRSLLYATVIFFVLYSTSGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTS 233 (524)
Q Consensus 154 ~~~~~~~~~~~~~~~~y~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~ 233 (524)
.. ++|+..
T Consensus 124 -n~-------------------------------------------------------~~G~~n---------------- 131 (365)
T 3s2u_A 124 -NA-------------------------------------------------------VAGTAN---------------- 131 (365)
T ss_dssp -SS-------------------------------------------------------SCCHHH----------------
T ss_pred -ch-------------------------------------------------------hhhhHH----------------
Confidence 00 000000
Q ss_pred hhHHHHHHHHHHHhcccccEEEEcCCcccccccccCCCcccccccccccCCCCCCCCCCccCcchhhHhhhcCCCCceEE
Q 009851 234 QKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVY 313 (524)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~v~~VGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~ 313 (524)
++ ..+.++.++. ++++. .+...+.+++|........... .. ...++. .++.|+
T Consensus 132 -----r~------l~~~a~~v~~-~~~~~----~~~~~k~~~~g~pvr~~~~~~~-------~~--~~~~~~--~~~~il 184 (365)
T 3s2u_A 132 -----RS------LAPIARRVCE-AFPDT----FPASDKRLTTGNPVRGELFLDA-------HA--RAPLTG--RRVNLL 184 (365)
T ss_dssp -----HH------HGGGCSEEEE-SSTTS----SCC---CEECCCCCCGGGCCCT-------TS--SCCCTT--SCCEEE
T ss_pred -----Hh------hccccceeee-ccccc----ccCcCcEEEECCCCchhhccch-------hh--hcccCC--CCcEEE
Confidence 00 0011222332 22221 1223456667754433221100 00 011222 345888
Q ss_pred EeecCCCCCCHHHHHHHHHHHhcC----CCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeeEEeccChh-hhhcCCCcce
Q 009851 314 VSFGSFTILDQVQFQELALGLELC----KRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQL-RVLNHPSIAC 388 (524)
Q Consensus 314 vs~GS~~~~~~~~~~~l~~al~~~----~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~vpq~-~lL~~~~v~~ 388 (524)
+..||..... ..+.+.++++.. +..++|..+.. ..+.. ....+..+.|+.+.+|+++. ++|+.+++
T Consensus 185 v~gGs~g~~~--~~~~~~~al~~l~~~~~~~vi~~~G~~----~~~~~-~~~~~~~~~~~~v~~f~~dm~~~l~~aDl-- 255 (365)
T 3s2u_A 185 VLGGSLGAEP--LNKLLPEALAQVPLEIRPAIRHQAGRQ----HAEIT-AERYRTVAVEADVAPFISDMAAAYAWADL-- 255 (365)
T ss_dssp ECCTTTTCSH--HHHHHHHHHHTSCTTTCCEEEEECCTT----THHHH-HHHHHHTTCCCEEESCCSCHHHHHHHCSE--
T ss_pred EECCcCCccc--cchhhHHHHHhcccccceEEEEecCcc----ccccc-cceecccccccccccchhhhhhhhccceE--
Confidence 9888875432 233355555433 34566665543 11111 11122446788899999986 79977776
Q ss_pred EEecCChhhHHHHHHcCCceeccCcc----cchhhhHHhhccccceeeEEecCCCCCCCHHHHHHHHHHHhcCHHHHHHH
Q 009851 389 FLSHCGWNSTMEGVSNGIPFLCWPYF----GDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARA 464 (524)
Q Consensus 389 ~ItHgG~gs~~Eal~~GvP~v~~P~~----~DQ~~na~rv~~~lG~G~~~~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a 464 (524)
+|||+|.+|+.|++++|+|+|++|+- .+|..||+.+++. |.|+.++. ..+|+++|.++|.++|.|++.++
T Consensus 256 vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~-G~a~~l~~---~~~~~~~L~~~i~~ll~d~~~~~-- 329 (365)
T 3s2u_A 256 VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRS-GAGRLLPQ---KSTGAAELAAQLSEVLMHPETLR-- 329 (365)
T ss_dssp EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTT-TSEEECCT---TTCCHHHHHHHHHHHHHCTHHHH--
T ss_pred EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHC-CCEEEeec---CCCCHHHHHHHHHHHHCCHHHHH--
Confidence 99999999999999999999999874 5899999999995 99999865 56899999999999999986554
Q ss_pred HHHHHHHHhhhhcCCCcHHHHHHHHHHHHHHhh
Q 009851 465 LELKEKAMSSVREGGSSYKTFQNFLQWTMNALK 497 (524)
Q Consensus 465 ~~l~~~~~~~~~~~g~~~~~~~~~~~~i~~~~~ 497 (524)
+|++..++. ...++.+++++.|+++.+
T Consensus 330 -~m~~~a~~~-----~~~~aa~~ia~~i~~lar 356 (365)
T 3s2u_A 330 -SMADQARSL-----AKPEATRTVVDACLEVAR 356 (365)
T ss_dssp -HHHHHHHHT-----CCTTHHHHHHHHHHHHC-
T ss_pred -HHHHHHHhc-----CCccHHHHHHHHHHHHHc
Confidence 444444442 223458888898888765
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.95 E-value=1e-26 Score=207.89 Aligned_cols=164 Identities=21% Similarity=0.386 Sum_probs=140.7
Q ss_pred cCcchhhHhhhcCCCCceEEEeecCCC-CCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeeEE
Q 009851 294 CEDSNCLKWLDQQQPSSVVYVSFGSFT-ILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMI 372 (524)
Q Consensus 294 ~~~~~l~~~l~~~~~~~vV~vs~GS~~-~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~ 372 (524)
++++++.+|++..+++++||+++||.. ....+.+..+++++++.+.+++|+.+... ++ .+++|+.+.
T Consensus 6 ~l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~--------~~----~~~~~v~~~ 73 (170)
T 2o6l_A 6 PLPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNK--------PD----TLGLNTRLY 73 (170)
T ss_dssp CCCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSC--------CT----TCCTTEEEE
T ss_pred CCCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcC--------cc----cCCCcEEEe
Confidence 577889999987665779999999985 45677888999999988999999986541 11 235789999
Q ss_pred eccChhhhhcCCCcceEEecCChhhHHHHHHcCCceeccCcccchhhhHHhhccccceeeEEecCCCCCCCHHHHHHHHH
Q 009851 373 SWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVD 452 (524)
Q Consensus 373 ~~vpq~~lL~~~~v~~~ItHgG~gs~~Eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~~~~~~~~~~t~~~l~~ai~ 452 (524)
+|+||.++|.|+.+++||||||+||++||+++|+|+|++|...||..||+++++ .|+|+.++. ..++.++|.++|.
T Consensus 74 ~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~-~g~g~~~~~---~~~~~~~l~~~i~ 149 (170)
T 2o6l_A 74 KWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKA-RGAAVRVDF---NTMSSTDLLNALK 149 (170)
T ss_dssp SSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHT-TTSEEECCT---TTCCHHHHHHHHH
T ss_pred cCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHH-cCCeEEecc---ccCCHHHHHHHHH
Confidence 999999999889999999999999999999999999999999999999999999 599999875 5689999999999
Q ss_pred HHhcCHHHHHHHHHHHHHHHh
Q 009851 453 QVLGNQDFKARALELKEKAMS 473 (524)
Q Consensus 453 ~~l~~~~~r~~a~~l~~~~~~ 473 (524)
++++|++|+++++++++.+++
T Consensus 150 ~ll~~~~~~~~a~~~~~~~~~ 170 (170)
T 2o6l_A 150 RVINDPSYKENVMKLSRIQHD 170 (170)
T ss_dssp HHHHCHHHHHHHHHHC-----
T ss_pred HHHcCHHHHHHHHHHHHHhhC
Confidence 999999999999999998874
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.82 E-value=2.2e-18 Score=173.06 Aligned_cols=339 Identities=14% Similarity=0.105 Sum_probs=202.9
Q ss_pred CCC--CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcCh--hhHHHhhhcCCCCCCCeEEEecCCCCCCCCCcc
Q 009851 1 MSR--PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNH--KRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRN 76 (524)
Q Consensus 1 m~~--~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~--~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 76 (524)
|++ +||++++.+..||..++..||++|.++||+|++++..... ..+.+ .+++++.++...... .
T Consensus 2 M~~m~mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~---------~g~~~~~~~~~~~~~---~ 69 (364)
T 1f0k_A 2 MSGQGKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPK---------HGIEIDFIRISGLRG---K 69 (364)
T ss_dssp -----CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGG---------GTCEEEECCCCCCTT---C
T ss_pred CCCCCcEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccc---------cCCceEEecCCccCc---C
Confidence 555 7999999888899999999999999999999999986542 22222 278877776321111 1
Q ss_pred cHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEECCCc--hhHHHHHHHcCCceEEEccchHHHHHHHhhccccccc
Q 009851 77 DLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNI--GWSMEIAKKMNVRGAVFWPSSAASVALVFRIPKLIDD 154 (524)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~D~vI~D~~~--~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~ 154 (524)
.....+...... ...+..+.+.++. .+||+|+++... ..+..++..+|+|++......
T Consensus 70 ~~~~~~~~~~~~-~~~~~~l~~~l~~---~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~---------------- 129 (364)
T 1f0k_A 70 GIKALIAAPLRI-FNAWRQARAIMKA---YKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNG---------------- 129 (364)
T ss_dssp CHHHHHTCHHHH-HHHHHHHHHHHHH---HCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSS----------------
T ss_pred ccHHHHHHHHHH-HHHHHHHHHHHHh---cCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCC----------------
Confidence 111111111110 0112233333333 689999998653 245677888999998632110
Q ss_pred CCCCCCCCCccccCCCCCCCCCCccccccccchhhhheehhhccCCCCCCccccccccCCCCCCCcccccccccCCCchh
Q 009851 155 GIIDSHGMIPCHVIPYFPPANFNFDACHSRSLLYATVIFFVLYSTSGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTSQ 234 (524)
Q Consensus 155 ~~~~~~~~~~~~~~~y~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~ 234 (524)
+ ++ ..
T Consensus 130 -----------------------------------------------~----------~~--------~~---------- 134 (364)
T 1f0k_A 130 -----------------------------------------------I----------AG--------LT---------- 134 (364)
T ss_dssp -----------------------------------------------S----------CC--------HH----------
T ss_pred -----------------------------------------------C----------Cc--------HH----------
Confidence 0 00 00
Q ss_pred hHHHHHHHHHHHhcccccEEEEcCCcccccccccCCCcccccccccccCCCCCCCCCCccCcchhhHhhhcCCCCceEEE
Q 009851 235 KIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTTFPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSVVYV 314 (524)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~v~~VGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~v 314 (524)
.+ -..+.++.+++.+... .+++..+|........ ..+. ..+.+...+++++|++
T Consensus 135 -------~~--~~~~~~d~v~~~~~~~--------~~~~~~i~n~v~~~~~--------~~~~-~~~~~~~~~~~~~il~ 188 (364)
T 1f0k_A 135 -------NK--WLAKIATKVMQAFPGA--------FPNAEVVGNPVRTDVL--------ALPL-PQQRLAGREGPVRVLV 188 (364)
T ss_dssp -------HH--HHTTTCSEEEESSTTS--------SSSCEECCCCCCHHHH--------TSCC-HHHHHTTCCSSEEEEE
T ss_pred -------HH--HHHHhCCEEEecChhh--------cCCceEeCCccchhhc--------ccch-hhhhcccCCCCcEEEE
Confidence 00 0012345555543322 1244555532211110 0000 0112222223456777
Q ss_pred eecCCCCCCHHHHHHHHHHHhcC--CCCEEEEEcCCCCCCCCCCCChhhHH---hhc-CCeeEEeccCh-hhhhcCCCcc
Q 009851 315 SFGSFTILDQVQFQELALGLELC--KRPFLWVVRPDITTDANDRYPEGFQE---RVA-ARGQMISWAPQ-LRVLNHPSIA 387 (524)
Q Consensus 315 s~GS~~~~~~~~~~~l~~al~~~--~~~~iw~~~~~~~~~~~~~l~~~~~~---~~~-~n~~v~~~vpq-~~lL~~~~v~ 387 (524)
..|+.. .......++++++.. +.++++.++.+. .+.+.+ ... +|+.+.+|+++ .++++.+++
T Consensus 189 ~~g~~~--~~k~~~~li~a~~~l~~~~~~l~i~G~~~--------~~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~- 257 (364)
T 1f0k_A 189 VGGSQG--ARILNQTMPQVAAKLGDSVTIWHQSGKGS--------QQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADV- 257 (364)
T ss_dssp ECTTTC--CHHHHHHHHHHHHHHGGGEEEEEECCTTC--------HHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSE-
T ss_pred EcCchH--hHHHHHHHHHHHHHhcCCcEEEEEcCCch--------HHHHHHHHhhcCCCceEEecchhhHHHHHHhCCE-
Confidence 777753 344445566666443 456667666541 122222 222 58999999954 589977777
Q ss_pred eEEecCChhhHHHHHHcCCceeccCcc---cchhhhHHhhccccceeeEEecCCCCCCCHHHHHHHHHHHhcCHHHHHHH
Q 009851 388 CFLSHCGWNSTMEGVSNGIPFLCWPYF---GDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKARA 464 (524)
Q Consensus 388 ~~ItHgG~gs~~Eal~~GvP~v~~P~~---~DQ~~na~rv~~~lG~G~~~~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a 464 (524)
+|+++|.+++.||+++|+|+|+.|.. .||..|+..+.+. |.|..++. ..++.++|.++|.++ |++.+++.
T Consensus 258 -~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~-g~g~~~~~---~d~~~~~la~~i~~l--~~~~~~~~ 330 (364)
T 1f0k_A 258 -VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKA-GAAKIIEQ---PQLSVDAVANTLAGW--SRETLLTM 330 (364)
T ss_dssp -EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHT-TSEEECCG---GGCCHHHHHHHHHTC--CHHHHHHH
T ss_pred -EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhC-CcEEEecc---ccCCHHHHHHHHHhc--CHHHHHHH
Confidence 99999999999999999999999988 7999999999885 99998865 446799999999988 77766655
Q ss_pred HHHHHHHHhhhhcCCCcHHHHHHHHHHHHHHhhc
Q 009851 465 LELKEKAMSSVREGGSSYKTFQNFLQWTMNALKK 498 (524)
Q Consensus 465 ~~l~~~~~~~~~~~g~~~~~~~~~~~~i~~~~~~ 498 (524)
.+-+.+..+ ....++.++.+++..++
T Consensus 331 ~~~~~~~~~--------~~~~~~~~~~~~~~y~~ 356 (364)
T 1f0k_A 331 AERARAASI--------PDATERVANEVSRVARA 356 (364)
T ss_dssp HHHHHHTCC--------TTHHHHHHHHHHHHHTT
T ss_pred HHHHHHhhc--------cCHHHHHHHHHHHHHHH
Confidence 444433221 23467777777777653
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.55 E-value=1.8e-13 Score=130.82 Aligned_cols=115 Identities=9% Similarity=0.068 Sum_probs=86.7
Q ss_pred CceEEEeecCCCCCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCChhhHHhh--cCCeeEEeccChh-hhhcCCC
Q 009851 309 SSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERV--AARGQMISWAPQL-RVLNHPS 385 (524)
Q Consensus 309 ~~vV~vs~GS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~--~~n~~v~~~vpq~-~lL~~~~ 385 (524)
.+.|+|++|... ..+....+++++.... ++.++.+.+ ....+.+.+.. ..|+.+..++++. ++++.++
T Consensus 157 ~~~ILv~~GG~d--~~~l~~~vl~~L~~~~-~i~vv~G~~------~~~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~aD 227 (282)
T 3hbm_A 157 KYDFFICMGGTD--IKNLSLQIASELPKTK-IISIATSSS------NPNLKKLQKFAKLHNNIRLFIDHENIAKLMNESN 227 (282)
T ss_dssp CEEEEEECCSCC--TTCHHHHHHHHSCTTS-CEEEEECTT------CTTHHHHHHHHHTCSSEEEEESCSCHHHHHHTEE
T ss_pred CCeEEEEECCCc--hhhHHHHHHHHhhcCC-CEEEEECCC------chHHHHHHHHHhhCCCEEEEeCHHHHHHHHHHCC
Confidence 458999999753 2235566888886644 566666554 12223333222 2589999999988 6996555
Q ss_pred cceEEecCChhhHHHHHHcCCceeccCcccchhhhHHhhccccceeeEEec
Q 009851 386 IACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDR 436 (524)
Q Consensus 386 v~~~ItHgG~gs~~Eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~~~~ 436 (524)
+ +||+|| +|+.|+++.|+|+|++|...+|..||+.+++. |.|+.+..
T Consensus 228 l--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~~-G~~~~~~~ 274 (282)
T 3hbm_A 228 K--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAKK-GYEVEYKY 274 (282)
T ss_dssp E--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHHT-TCEEECGG
T ss_pred E--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHC-CCEEEcch
Confidence 5 999999 89999999999999999999999999999995 99998854
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.50 E-value=3.7e-14 Score=129.98 Aligned_cols=131 Identities=8% Similarity=0.040 Sum_probs=93.2
Q ss_pred CCCceEEEeecCCCCCCHHHHHHH-----HHHHhcCC-CCEEEEEcCCCCCCCCCCCChhhHHhh---------------
Q 009851 307 QPSSVVYVSFGSFTILDQVQFQEL-----ALGLELCK-RPFLWVVRPDITTDANDRYPEGFQERV--------------- 365 (524)
Q Consensus 307 ~~~~vV~vs~GS~~~~~~~~~~~l-----~~al~~~~-~~~iw~~~~~~~~~~~~~l~~~~~~~~--------------- 365 (524)
+++++|||+.||... -.+.+..+ ++++...+ .+++++++.... ...+.+.+..
T Consensus 26 ~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~-----~~~~~~~~~~~~~~~~~l~p~~~~~ 99 (224)
T 2jzc_A 26 IEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYS-----SEFEHLVQERGGQRESQKIPIDQFG 99 (224)
T ss_dssp CCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSC-----CCCCSHHHHHTCEECSCCCSSCTTC
T ss_pred CCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCch-----hhHHHHHHhhhcccccccccccccc
Confidence 346699999999732 24444443 48887777 789999886521 0111111011
Q ss_pred -------------cCCeeEEeccChh-hhhc-CCCcceEEecCChhhHHHHHHcCCceeccCcc----cchhhhHHhhcc
Q 009851 366 -------------AARGQMISWAPQL-RVLN-HPSIACFLSHCGWNSTMEGVSNGIPFLCWPYF----GDQFLNERYICD 426 (524)
Q Consensus 366 -------------~~n~~v~~~vpq~-~lL~-~~~v~~~ItHgG~gs~~Eal~~GvP~v~~P~~----~DQ~~na~rv~~ 426 (524)
.-++.+.+|+++. ++|+ .+++ +|||||.||++|++++|+|+|++|.. .||..||+++++
T Consensus 100 ~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~ 177 (224)
T 2jzc_A 100 CGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVE 177 (224)
T ss_dssp TTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHH
T ss_pred ccccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHH
Confidence 1244566888886 8896 6666 99999999999999999999999984 369999999999
Q ss_pred ccceeeEEecCCCCCCCHHHHHHHHHHH
Q 009851 427 FWKVGLKFDRDEGGIITREEIKNKVDQV 454 (524)
Q Consensus 427 ~lG~G~~~~~~~~~~~t~~~l~~ai~~~ 454 (524)
. |.|+.+ +.+.|.++|.++
T Consensus 178 ~-G~~~~~--------~~~~L~~~i~~l 196 (224)
T 2jzc_A 178 L-GYVWSC--------APTETGLIAGLR 196 (224)
T ss_dssp H-SCCCEE--------CSCTTTHHHHHH
T ss_pred C-CCEEEc--------CHHHHHHHHHHH
Confidence 4 998765 456677777766
No 25
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.35 E-value=7.4e-10 Score=113.50 Aligned_cols=113 Identities=15% Similarity=0.089 Sum_probs=79.8
Q ss_pred cCCeeEEeccChh---hhhcCCCcceEEec----CChhhHHHHHHcCCceeccCcccchhhhHHhhccccceeeEEecCC
Q 009851 366 AARGQMISWAPQL---RVLNHPSIACFLSH----CGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDE 438 (524)
Q Consensus 366 ~~n~~v~~~vpq~---~lL~~~~v~~~ItH----gG~gs~~Eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~~~~~~ 438 (524)
.+|+.+.+++|+. ++++.+++ +|.- |..+++.||+++|+|+|+.+. ......+.+. +.|..++.
T Consensus 305 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~-~~g~~~~~-- 375 (438)
T 3c48_A 305 EKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQASGTPVIAARV----GGLPIAVAEG-ETGLLVDG-- 375 (438)
T ss_dssp TTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHHTTCCEEEESC----TTHHHHSCBT-TTEEEESS--
T ss_pred CCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHHcCCCEEecCC----CChhHHhhCC-CcEEECCC--
Confidence 4789999999875 67877777 6654 335689999999999998654 3455666663 67888754
Q ss_pred CCCCCHHHHHHHHHHHhcCHHHHH----HHHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHHhhc
Q 009851 439 GGIITREEIKNKVDQVLGNQDFKA----RALELKEKAMSSVREGGSSYKTFQNFLQWTMNALKK 498 (524)
Q Consensus 439 ~~~~t~~~l~~ai~~~l~~~~~r~----~a~~l~~~~~~~~~~~g~~~~~~~~~~~~i~~~~~~ 498 (524)
-+.+++.++|.++++|++.++ ++++..+.+ +.....+++.+.+++++..
T Consensus 376 ---~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~--------s~~~~~~~~~~~~~~~~~~ 428 (438)
T 3c48_A 376 ---HSPHAWADALATLLDDDETRIRMGEDAVEHARTF--------SWAATAAQLSSLYNDAIAN 428 (438)
T ss_dssp ---CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHT
T ss_pred ---CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhC--------CHHHHHHHHHHHHHHHhhh
Confidence 479999999999999876443 333333332 4455566777777776653
No 26
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.35 E-value=2.3e-10 Score=115.37 Aligned_cols=350 Identities=12% Similarity=0.032 Sum_probs=189.2
Q ss_pred CCCCEEEEEcC--C--CccCHHHHHHHHHHHHhCCCEEEEEeCCcChhhHHHhhhcCCCCCCCeEEEecCCCCCCCCCcc
Q 009851 1 MSRPRVLVMPA--P--AQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRN 76 (524)
Q Consensus 1 m~~~~il~~~~--~--~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 76 (524)
|+++||++++. + ..|.-..+..|++.| +||+|++++............ ...++.++.++......
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~---- 70 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYD-----KTLDYEVIRWPRSVMLP---- 70 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHH-----TTCSSEEEEESSSSCCS----
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhc-----cccceEEEEcccccccc----
Confidence 45789998864 3 468889999999999 799999999877654211111 11478887777432111
Q ss_pred cHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEECCCch--hHHHHHHHcCCceEE-EccchHHHHHHHhhcccccc
Q 009851 77 DLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG--WSMEIAKKMNVRGAV-FWPSSAASVALVFRIPKLID 153 (524)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~D~vI~D~~~~--~~~~~A~~lgiP~i~-~~~~~~~~~~~~~~~~~~~~ 153 (524)
.. .....+..+++. .+||+|++....+ ....++..+|+|.++ ..........
T Consensus 71 ~~---------~~~~~l~~~~~~------~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~---------- 125 (394)
T 3okp_A 71 TP---------TTAHAMAEIIRE------REIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGWS---------- 125 (394)
T ss_dssp CH---------HHHHHHHHHHHH------TTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHHHT----------
T ss_pred ch---------hhHHHHHHHHHh------cCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhhhh----------
Confidence 11 011124455555 7899999865544 456668889998544 3322111000
Q ss_pred cCCCCCCCCCccccCCCCCCCCCCccccccccchhhhheehhhccCCCCCCccccccccCCCCCCCcccccccccCCCch
Q 009851 154 DGIIDSHGMIPCHVIPYFPPANFNFDACHSRSLLYATVIFFVLYSTSGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDWTS 233 (524)
Q Consensus 154 ~~~~~~~~~~~~~~~~y~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~ 233 (524)
. .. .
T Consensus 126 ---------------------------------------------------------------~-----~~--------~ 129 (394)
T 3okp_A 126 ---------------------------------------------------------------M-----LP--------G 129 (394)
T ss_dssp ---------------------------------------------------------------T-----SH--------H
T ss_pred ---------------------------------------------------------------h-----cc--------h
Confidence 0 00 0
Q ss_pred hhHHHHHHHHHHHhcccccEEEEcCCcccccccccC--CCcccccccccccCCCCCCCCCCccCcchhhHhhhcCCCCce
Q 009851 234 QKIFFDLLERNTRAMIAVNFHFCNSTYELESEAFTT--FPELLPIGPLLASNRLGNTAGYFWCEDSNCLKWLDQQQPSSV 311 (524)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~--~~~v~~VGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~v 311 (524)
..... ....+.+|.+++.|....+.-.... ..++..|.......... + ........+.+-+.- +++..
T Consensus 130 ---~~~~~---~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~-~--~~~~~~~~~~~~~~~-~~~~~ 199 (394)
T 3okp_A 130 ---SRQSL---RKIGTEVDVLTYISQYTLRRFKSAFGSHPTFEHLPSGVDVKRFT-P--ATPEDKSATRKKLGF-TDTTP 199 (394)
T ss_dssp ---HHHHH---HHHHHHCSEEEESCHHHHHHHHHHHCSSSEEEECCCCBCTTTSC-C--CCHHHHHHHHHHTTC-CTTCC
T ss_pred ---hhHHH---HHHHHhCCEEEEcCHHHHHHHHHhcCCCCCeEEecCCcCHHHcC-C--CCchhhHHHHHhcCC-CcCce
Confidence 00000 1123567777777765544321111 23455554322211110 0 000011222222222 22336
Q ss_pred EEEeecCCCC-CCHHHHHHHHHHHhc--CCCCEEEEEcCCCCCCCCCCCChhhH---HhhcCCeeEEeccChh---hhhc
Q 009851 312 VYVSFGSFTI-LDQVQFQELALGLEL--CKRPFLWVVRPDITTDANDRYPEGFQ---ERVAARGQMISWAPQL---RVLN 382 (524)
Q Consensus 312 V~vs~GS~~~-~~~~~~~~l~~al~~--~~~~~iw~~~~~~~~~~~~~l~~~~~---~~~~~n~~v~~~vpq~---~lL~ 382 (524)
+++..|+... ...+.+-+.+..+.+ .+.++++. +.+ ...+.+. ..+.+|+.+.+++|+. ++++
T Consensus 200 ~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~-G~g-------~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~ 271 (394)
T 3okp_A 200 VIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIV-GSG-------RYESTLRRLATDVSQNVKFLGRLEYQDMINTLA 271 (394)
T ss_dssp EEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEE-CCC-------TTHHHHHHHTGGGGGGEEEEESCCHHHHHHHHH
T ss_pred EEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEE-cCc-------hHHHHHHHHHhcccCeEEEcCCCCHHHHHHHHH
Confidence 7788887632 233333333333322 24555544 332 1112222 2345889999999876 4786
Q ss_pred CCCcceEEe-----------cCChhhHHHHHHcCCceeccCcccchhhhHHhhccccceeeEEecCCCCCCCHHHHHHHH
Q 009851 383 HPSIACFLS-----------HCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKV 451 (524)
Q Consensus 383 ~~~v~~~It-----------HgG~gs~~Eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~~~~~~~~~~t~~~l~~ai 451 (524)
.+++ +|. -|..+++.||+++|+|+|+.+.. .....+.+ |.|..++. -+.+++.++|
T Consensus 272 ~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~----~~~e~i~~--~~g~~~~~-----~d~~~l~~~i 338 (394)
T 3okp_A 272 AADI--FAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSG----GAPETVTP--ATGLVVEG-----SDVDKLSELL 338 (394)
T ss_dssp HCSE--EEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSST----TGGGGCCT--TTEEECCT-----TCHHHHHHHH
T ss_pred hCCE--EEecCccccccccccccCcHHHHHHHcCCCEEEeCCC----ChHHHHhc--CCceEeCC-----CCHHHHHHHH
Confidence 7777 675 55667999999999999996653 34444544 57777743 4799999999
Q ss_pred HHHhcCHHHHHHHHHH-HHHHHhhhhcCCCcHHHHHHHHHHHHHHhh
Q 009851 452 DQVLGNQDFKARALEL-KEKAMSSVREGGSSYKTFQNFLQWTMNALK 497 (524)
Q Consensus 452 ~~~l~~~~~r~~a~~l-~~~~~~~~~~~g~~~~~~~~~~~~i~~~~~ 497 (524)
.+++.|++.+++..+- .+.+++ .-+.....+.+.+.+++..+
T Consensus 339 ~~l~~~~~~~~~~~~~~~~~~~~----~~s~~~~~~~~~~~~~~~~r 381 (394)
T 3okp_A 339 IELLDDPIRRAAMGAAGRAHVEA----EWSWEIMGERLTNILQSEPR 381 (394)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHH----HTBHHHHHHHHHHHHHSCCC
T ss_pred HHHHhCHHHHHHHHHHHHHHHHH----hCCHHHHHHHHHHHHHHhcc
Confidence 9999987644333222 222222 23555556666666665544
No 27
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.27 E-value=1.1e-09 Score=111.94 Aligned_cols=167 Identities=10% Similarity=0.024 Sum_probs=96.3
Q ss_pred eEEEeecCCC-C-CCHHHHHHHHHHHhc----CCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeeEEeccChh---hhh
Q 009851 311 VVYVSFGSFT-I-LDQVQFQELALGLEL----CKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQL---RVL 381 (524)
Q Consensus 311 vV~vs~GS~~-~-~~~~~~~~l~~al~~----~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~vpq~---~lL 381 (524)
.+++..|+.. . ...+.+-+.+..+.. .+.++++. +.+.. .....-....+..++++.+.+|+|+. +++
T Consensus 252 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~-G~g~~--~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~ 328 (439)
T 3fro_A 252 VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIII-GKGDP--ELEGWARSLEEKHGNVKVITEMLSREFVRELY 328 (439)
T ss_dssp EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEE-CCCCH--HHHHHHHHHHHHCTTEEEECSCCCHHHHHHHH
T ss_pred cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEE-cCCCh--hHHHHHHHHHhhcCCEEEEcCCCCHHHHHHHH
Confidence 7888889875 2 344444444444433 34454433 33200 00000011222334444556889986 578
Q ss_pred cCCCcceEEec----CChhhHHHHHHcCCceeccCcccchhhhHHhhccccceeeEEecCCCCCCCHHHHHHHHHHHhc-
Q 009851 382 NHPSIACFLSH----CGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLG- 456 (524)
Q Consensus 382 ~~~~v~~~ItH----gG~gs~~Eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~~~~~~~~~~t~~~l~~ai~~~l~- 456 (524)
+.+++ +|.- |-.+++.||+++|+|+|+... ......+.+ |.|..++. -+.+++.++|.++++
T Consensus 329 ~~adv--~v~ps~~e~~~~~~~EAma~G~Pvi~s~~----~~~~e~~~~--~~g~~~~~-----~d~~~la~~i~~ll~~ 395 (439)
T 3fro_A 329 GSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDIITN--ETGILVKA-----GDPGELANAILKALEL 395 (439)
T ss_dssp TTCSE--EEECBSCCSSCHHHHHHHHTTCEEEEESS----THHHHHCCT--TTCEEECT-----TCHHHHHHHHHHHHHH
T ss_pred HHCCE--EEeCCCCCCccHHHHHHHHCCCCeEEcCC----CCcceeEEc--CceEEeCC-----CCHHHHHHHHHHHHhc
Confidence 77776 6632 335799999999999998643 345555544 78888854 579999999999998
Q ss_pred CHHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHHhh
Q 009851 457 NQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWTMNALK 497 (524)
Q Consensus 457 ~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~i~~~~~ 497 (524)
|++.+++..+ ..++.+ +.-+.....+++.+.++++++
T Consensus 396 ~~~~~~~~~~---~~~~~~-~~~s~~~~~~~~~~~~~~~~~ 432 (439)
T 3fro_A 396 SRSDLSKFRE---NCKKRA-MSFSWEKSAERYVKAYTGSID 432 (439)
T ss_dssp TTTTTHHHHH---HHHHHH-HTSCHHHHHHHHHHHHHTCSC
T ss_pred CHHHHHHHHH---HHHHHH-hhCcHHHHHHHHHHHHHHHHH
Confidence 6643332222 222211 123556666666666666554
No 28
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.23 E-value=1.9e-10 Score=113.96 Aligned_cols=154 Identities=12% Similarity=0.091 Sum_probs=98.3
Q ss_pred EEEeecCCCCCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeeEEeccChh---hhhcCCCcce
Q 009851 312 VYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQL---RVLNHPSIAC 388 (524)
Q Consensus 312 V~vs~GS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~vpq~---~lL~~~~v~~ 388 (524)
+++..|... ..+....++++++..+.++++. +.+. ....-+.+.+...+|+.+.+++|+. ++++.+++
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~-G~g~----~~~~l~~~~~~~~~~v~~~g~~~~~~l~~~~~~adv-- 234 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVLA-GPAW----EPEYFDEITRRYGSTVEPIGEVGGERRLDLLASAHA-- 234 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEEE-SCCC----CHHHHHHHHHHHTTTEEECCCCCHHHHHHHHHHCSE--
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEEE-eCcc----cHHHHHHHHHHhCCCEEEeccCCHHHHHHHHHhCCE--
Confidence 455567653 3345566777777777776654 3320 0000112333445899999999986 78877777
Q ss_pred EEe--c------------CChhhHHHHHHcCCceeccCcccchhhhHHhhcc--ccceeeEEecCCCCCCCHHHHHHHHH
Q 009851 389 FLS--H------------CGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICD--FWKVGLKFDRDEGGIITREEIKNKVD 452 (524)
Q Consensus 389 ~It--H------------gG~gs~~Eal~~GvP~v~~P~~~DQ~~na~rv~~--~lG~G~~~~~~~~~~~t~~~l~~ai~ 452 (524)
+|. . |-.+++.||+++|+|+|+.... .....+.+ . +.|..+ .. +.+++.++|.
T Consensus 235 ~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~----~~~e~~~~~~~-~~g~~~-----~~-d~~~l~~~i~ 303 (342)
T 2iuy_A 235 VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNG----CLAEIVPSVGE-VVGYGT-----DF-APDEARRTLA 303 (342)
T ss_dssp EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTT----THHHHGGGGEE-ECCSSS-----CC-CHHHHHHHHH
T ss_pred EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCC----ChHHHhcccCC-CceEEc-----CC-CHHHHHHHHH
Confidence 652 2 3346899999999999987753 35555654 3 566665 34 8999999999
Q ss_pred HHhcCHHHHHHHHHHH-HHHHhhhhcCCCcHHHHHHHHHHHHHHhh
Q 009851 453 QVLGNQDFKARALELK-EKAMSSVREGGSSYKTFQNFLQWTMNALK 497 (524)
Q Consensus 453 ~~l~~~~~r~~a~~l~-~~~~~~~~~~g~~~~~~~~~~~~i~~~~~ 497 (524)
++++ .+++++.. +.+ +.....+++.+.+++.++
T Consensus 304 ~l~~----~~~~~~~~~~~~--------s~~~~~~~~~~~~~~~~~ 337 (342)
T 2iuy_A 304 GLPA----SDEVRRAAVRLW--------GHVTIAERYVEQYRRLLA 337 (342)
T ss_dssp TSCC----HHHHHHHHHHHH--------BHHHHHHHHHHHHHHHHT
T ss_pred HHHH----HHHHHHHHHHhc--------CHHHHHHHHHHHHHHHHc
Confidence 9986 44444433 222 445566667776666654
No 29
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.21 E-value=1.1e-08 Score=103.13 Aligned_cols=117 Identities=15% Similarity=0.108 Sum_probs=77.4
Q ss_pred cCCeeEEeccChh-hhhcCCCcceEE----ecCChhhHHHHHHcCCceeccCcccchhhhHHhhccccceeeEEecCCCC
Q 009851 366 AARGQMISWAPQL-RVLNHPSIACFL----SHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGG 440 (524)
Q Consensus 366 ~~n~~v~~~vpq~-~lL~~~~v~~~I----tHgG~gs~~Eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~~~~~~~~ 440 (524)
.+|+.+.++..+. ++++.+++ +| .-|..+++.||+++|+|+|+.+.. .....+.+. +.|..++.
T Consensus 266 ~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~----~~~e~v~~~-~~g~~~~~---- 334 (394)
T 2jjm_A 266 EDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVG----GIPEVIQHG-DTGYLCEV---- 334 (394)
T ss_dssp GGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCT----TSTTTCCBT-TTEEEECT----
T ss_pred CCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCC----ChHHHhhcC-CceEEeCC----
Confidence 4678788775543 78877777 77 456677999999999999987653 344445553 67887754
Q ss_pred CCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHHhh
Q 009851 441 IITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWTMNALK 497 (524)
Q Consensus 441 ~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~i~~~~~ 497 (524)
-+.+++.++|.+++.|++.+++.. +..++.+.+.-+.....+.+.+.+++++.
T Consensus 335 -~d~~~la~~i~~l~~~~~~~~~~~---~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 387 (394)
T 2jjm_A 335 -GDTTGVADQAIQLLKDEELHRNMG---ERARESVYEQFRSEKIVSQYETIYYDVLR 387 (394)
T ss_dssp -TCHHHHHHHHHHHHHCHHHHHHHH---HHHHHHHHHHSCHHHHHHHHHHHHHHTC-
T ss_pred -CCHHHHHHHHHHHHcCHHHHHHHH---HHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 479999999999999876444322 22222221233556666666666666554
No 30
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.20 E-value=6.2e-09 Score=108.67 Aligned_cols=118 Identities=15% Similarity=0.095 Sum_probs=80.2
Q ss_pred cCCeeEEeccChh---hhhcCC----CcceEEec----CChhhHHHHHHcCCceeccCcccchhhhHHhhccccceeeEE
Q 009851 366 AARGQMISWAPQL---RVLNHP----SIACFLSH----CGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKF 434 (524)
Q Consensus 366 ~~n~~v~~~vpq~---~lL~~~----~v~~~ItH----gG~gs~~Eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~~ 434 (524)
.+++.+.+++|+. .+++.+ ++ +|.- |--.++.||+++|+|+|+... ......+.+. +.|..+
T Consensus 334 ~~~V~~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v~~~-~~g~l~ 406 (499)
T 2r60_A 334 RGKVSMFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEILDGG-KYGVLV 406 (499)
T ss_dssp BTTEEEEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHTGGG-TSSEEE
T ss_pred CceEEECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHhcCC-ceEEEe
Confidence 4789999999876 567666 66 6632 334689999999999998754 3455556552 578888
Q ss_pred ecCCCCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHHhhc
Q 009851 435 DRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWTMNALKK 498 (524)
Q Consensus 435 ~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~i~~~~~~ 498 (524)
+. -+.+++.++|.++++|++.+++. ++..++.+.+.-+.....+++.+.+++++..
T Consensus 407 ~~-----~d~~~la~~i~~ll~~~~~~~~~---~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~~ 462 (499)
T 2r60_A 407 DP-----EDPEDIARGLLKAFESEETWSAY---QEKGKQRVEERYTWQETARGYLEVIQEIADR 462 (499)
T ss_dssp CT-----TCHHHHHHHHHHHHSCHHHHHHH---HHHHHHHHHHHSBHHHHHHHHHHHHHHHHHC
T ss_pred CC-----CCHHHHHHHHHHHHhCHHHHHHH---HHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 54 57999999999999988654432 2222222222335666677777777777653
No 31
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.19 E-value=2.6e-10 Score=114.46 Aligned_cols=159 Identities=13% Similarity=0.062 Sum_probs=96.8
Q ss_pred CceEEEeecCCCCCCHHHHHHHHHHHhc-----CCCCEEEEEcCCCCCCCCCCCChhhHHhh--cCCeeEEeccCh---h
Q 009851 309 SSVVYVSFGSFTILDQVQFQELALGLEL-----CKRPFLWVVRPDITTDANDRYPEGFQERV--AARGQMISWAPQ---L 378 (524)
Q Consensus 309 ~~vV~vs~GS~~~~~~~~~~~l~~al~~-----~~~~~iw~~~~~~~~~~~~~l~~~~~~~~--~~n~~v~~~vpq---~ 378 (524)
+++|+++.|...... .+..+++|++. .+.++++..+.+ ..+.+.+.+.. .+++.+.+++++ .
T Consensus 198 ~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~------~~~~~~l~~~~~~~~~v~~~g~~g~~~~~ 269 (376)
T 1v4v_A 198 GPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLN------PVVREAVFPVLKGVRNFVLLDPLEYGSMA 269 (376)
T ss_dssp SCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSC------HHHHHHHHHHHTTCTTEEEECCCCHHHHH
T ss_pred CCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCC------HHHHHHHHHHhccCCCEEEECCCCHHHHH
Confidence 447777777542221 34455666532 245555443432 00112222221 358888866555 4
Q ss_pred hhhcCCCcceEEecCChhhHHHHHHcCCceeccCcccchhhhHHhhccccceeeEEecCCCCCCCHHHHHHHHHHHhcCH
Q 009851 379 RVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQ 458 (524)
Q Consensus 379 ~lL~~~~v~~~ItHgG~gs~~Eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~~~~~~~~~~t~~~l~~ai~~~l~~~ 458 (524)
++++.+++ ||+.+| |.+.||+++|+|+|+.+..+++... + +. |.|+.++ .+.++|.++|.++++|+
T Consensus 270 ~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~~---~-~~-g~g~lv~------~d~~~la~~i~~ll~d~ 335 (376)
T 1v4v_A 270 ALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPEG---L-KA-GILKLAG------TDPEGVYRVVKGLLENP 335 (376)
T ss_dssp HHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHHH---H-HH-TSEEECC------SCHHHHHHHHHHHHTCH
T ss_pred HHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchhh---h-cC-CceEECC------CCHHHHHHHHHHHHhCh
Confidence 88966666 999884 4466999999999999877776653 3 43 7887663 38999999999999998
Q ss_pred HHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHHhh
Q 009851 459 DFKARALELKEKAMSSVREGGSSYKTFQNFLQWTMNALK 497 (524)
Q Consensus 459 ~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~i~~~~~ 497 (524)
+.+++..+. .+. . +.....++.++.+++.+.
T Consensus 336 ~~~~~~~~~---~~~-~----~~~~~~~~i~~~i~~~~~ 366 (376)
T 1v4v_A 336 EELSRMRKA---KNP-Y----GDGKAGLMVARGVAWRLG 366 (376)
T ss_dssp HHHHHHHHS---CCS-S----CCSCHHHHHHHHHHHHTT
T ss_pred Hhhhhhccc---CCC-C----CCChHHHHHHHHHHHHhc
Confidence 655544332 111 1 112346777777777654
No 32
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.18 E-value=3e-10 Score=114.27 Aligned_cols=160 Identities=13% Similarity=0.096 Sum_probs=98.4
Q ss_pred CceEEEeecCCCCCCHHHHHHHHHHHhc-----CCCCEEEEEcCCCCCCCCCCCChhhHHhh--cCCeeEEeccCh---h
Q 009851 309 SSVVYVSFGSFTILDQVQFQELALGLEL-----CKRPFLWVVRPDITTDANDRYPEGFQERV--AARGQMISWAPQ---L 378 (524)
Q Consensus 309 ~~vV~vs~GS~~~~~~~~~~~l~~al~~-----~~~~~iw~~~~~~~~~~~~~l~~~~~~~~--~~n~~v~~~vpq---~ 378 (524)
+++|+++.|......+ .+..+++|+.. .+.++++..+.+ ..+.+.+.+.. .+|+.+.+++++ .
T Consensus 205 ~~~vl~~~gr~~~~~k-g~~~li~a~~~l~~~~~~~~l~i~~g~~------~~~~~~l~~~~~~~~~v~~~g~~~~~~~~ 277 (384)
T 1vgv_A 205 KKMILVTGHRRESFGR-GFEEICHALADIATTHQDIQIVYPVHLN------PNVREPVNRILGHVKNVILIDPQEYLPFV 277 (384)
T ss_dssp SEEEEEECCCBSSCCH-HHHHHHHHHHHHHHHCTTEEEEEECCBC------HHHHHHHHHHHTTCTTEEEECCCCHHHHH
T ss_pred CCEEEEEeCCccccch-HHHHHHHHHHHHHhhCCCeEEEEEcCCC------HHHHHHHHHHhhcCCCEEEeCCCCHHHHH
Confidence 4578888887543322 34555555532 245555533321 00112222221 268888777765 4
Q ss_pred hhhcCCCcceEEecCChhhHHHHHHcCCceeccCcccchhhhHHhhccccceeeEEecCCCCCCCHHHHHHHHHHHhcCH
Q 009851 379 RVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQ 458 (524)
Q Consensus 379 ~lL~~~~v~~~ItHgG~gs~~Eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~~~~~~~~~~t~~~l~~ai~~~l~~~ 458 (524)
++++.+++ ||+.+| +.+.||+++|+|+|+.|..++... +.+. |.|+.++ . +.++|.++|.++++|+
T Consensus 278 ~~~~~ad~--~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~~e----~v~~-g~g~lv~-----~-d~~~la~~i~~ll~d~ 343 (384)
T 1vgv_A 278 WLMNHAWL--ILTDSG-GIQEEAPSLGKPVLVMRDTTERPE----AVTA-GTVRLVG-----T-DKQRIVEEVTRLLKDE 343 (384)
T ss_dssp HHHHHCSE--EEESSS-TGGGTGGGGTCCEEEESSCCSCHH----HHHH-TSEEEEC-----S-SHHHHHHHHHHHHHCH
T ss_pred HHHHhCcE--EEECCc-chHHHHHHcCCCEEEccCCCCcch----hhhC-CceEEeC-----C-CHHHHHHHHHHHHhCh
Confidence 67877777 999886 448899999999999987554332 3343 8888774 2 8999999999999988
Q ss_pred HHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHHhh
Q 009851 459 DFKARALELKEKAMSSVREGGSSYKTFQNFLQWTMNALK 497 (524)
Q Consensus 459 ~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~i~~~~~ 497 (524)
+.+++. ++..++. ......++.++.+++..+
T Consensus 344 ~~~~~~---~~~~~~~-----~~~~~~~~i~~~~~~~~~ 374 (384)
T 1vgv_A 344 NEYQAM---SRAHNPY-----GDGQACSRILEALKNNRI 374 (384)
T ss_dssp HHHHHH---HSSCCTT-----CCSCHHHHHHHHHHHTCC
T ss_pred HHHhhh---hhccCCC-----cCCCHHHHHHHHHHHHHH
Confidence 655433 3332321 112346677777777665
No 33
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.17 E-value=4.9e-11 Score=120.70 Aligned_cols=137 Identities=12% Similarity=0.092 Sum_probs=85.1
Q ss_pred CceEEEeecCCCCCCHHHHHHHHHHHhc-----CCCCEEEEEcCCCCCCCCCCCChhhHHh--hcCCeeEEeccCh---h
Q 009851 309 SSVVYVSFGSFTILDQVQFQELALGLEL-----CKRPFLWVVRPDITTDANDRYPEGFQER--VAARGQMISWAPQ---L 378 (524)
Q Consensus 309 ~~vV~vs~GS~~~~~~~~~~~l~~al~~-----~~~~~iw~~~~~~~~~~~~~l~~~~~~~--~~~n~~v~~~vpq---~ 378 (524)
+++|+++.+-...... .+..+++|+.. .+.++++..+.+ ..+.+.+.+. ..+|+.+.+++++ .
T Consensus 230 ~~~vlv~~hR~~~~~~-~~~~ll~A~~~l~~~~~~~~~v~~~g~~------~~~~~~l~~~~~~~~~v~~~~~lg~~~~~ 302 (396)
T 3dzc_A 230 KKLILVTGHRRESFGG-GFERICQALITTAEQHPECQILYPVHLN------PNVREPVNKLLKGVSNIVLIEPQQYLPFV 302 (396)
T ss_dssp SEEEEEECSCBCCCTT-HHHHHHHHHHHHHHHCTTEEEEEECCBC------HHHHHHHHHHTTTCTTEEEECCCCHHHHH
T ss_pred CCEEEEEECCcccchh-HHHHHHHHHHHHHHhCCCceEEEEeCCC------hHHHHHHHHHHcCCCCEEEeCCCCHHHHH
Confidence 5577666522122222 24566666643 355666654422 0111122221 2368888777754 4
Q ss_pred hhhcCCCcceEEecCChhhHHHHHHcCCceeccCcccchhhhHHhhccccceeeEEecCCCCCCCHHHHHHHHHHHhcCH
Q 009851 379 RVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQ 458 (524)
Q Consensus 379 ~lL~~~~v~~~ItHgG~gs~~Eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~~~~~~~~~~t~~~l~~ai~~~l~~~ 458 (524)
.+++.+++ +|+-.| |.+.||.++|+|+|+..-..+++. .+ +. |.++.+. .+.++|.++|.++++|+
T Consensus 303 ~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~e---~v-~~-G~~~lv~------~d~~~l~~ai~~ll~d~ 368 (396)
T 3dzc_A 303 YLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERPE---AV-AA-GTVKLVG------TNQQQICDALSLLLTDP 368 (396)
T ss_dssp HHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCHH---HH-HH-TSEEECT------TCHHHHHHHHHHHHHCH
T ss_pred HHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcchH---HH-Hc-CceEEcC------CCHHHHHHHHHHHHcCH
Confidence 78877777 999988 666799999999999865555532 23 43 8776552 26999999999999998
Q ss_pred HHHHHHHH
Q 009851 459 DFKARALE 466 (524)
Q Consensus 459 ~~r~~a~~ 466 (524)
+.+++..+
T Consensus 369 ~~~~~m~~ 376 (396)
T 3dzc_A 369 QAYQAMSQ 376 (396)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhh
Confidence 76654443
No 34
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.16 E-value=6.8e-11 Score=119.83 Aligned_cols=160 Identities=11% Similarity=0.085 Sum_probs=95.6
Q ss_pred CceEEEeecCCCCCCHHHHHHHHHHHhc-----CCCCEEEEEcCCCCCCCCCCCChhhHHh--hcCCeeEEeccChh---
Q 009851 309 SSVVYVSFGSFTILDQVQFQELALGLEL-----CKRPFLWVVRPDITTDANDRYPEGFQER--VAARGQMISWAPQL--- 378 (524)
Q Consensus 309 ~~vV~vs~GS~~~~~~~~~~~l~~al~~-----~~~~~iw~~~~~~~~~~~~~l~~~~~~~--~~~n~~v~~~vpq~--- 378 (524)
+++++++.|...... +.+..+++++.. .+.++++..+.+ ..+.+.+.+. ..+|+.+.+++++.
T Consensus 224 ~~~vlv~~~r~~~~~-~~l~~ll~a~~~l~~~~~~~~~v~~~~~~------~~~~~~l~~~~~~~~~v~l~~~l~~~~~~ 296 (403)
T 3ot5_A 224 NRLILMTAHRRENLG-EPMQGMFEAVREIVESREDTELVYPMHLN------PAVREKAMAILGGHERIHLIEPLDAIDFH 296 (403)
T ss_dssp CEEEEECCCCHHHHT-THHHHHHHHHHHHHHHCTTEEEEEECCSC------HHHHHHHHHHHTTCTTEEEECCCCHHHHH
T ss_pred CCEEEEEeCcccccC-cHHHHHHHHHHHHHHhCCCceEEEecCCC------HHHHHHHHHHhCCCCCEEEeCCCCHHHHH
Confidence 557777655321111 123455555532 345666654322 0111112221 23688899988743
Q ss_pred hhhcCCCcceEEecCChhhHHHHHHcCCceeccCcccchhhhHHhhccccceeeEEecCCCCCCCHHHHHHHHHHHhcCH
Q 009851 379 RVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQ 458 (524)
Q Consensus 379 ~lL~~~~v~~~ItHgG~gs~~Eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~~~~~~~~~~t~~~l~~ai~~~l~~~ 458 (524)
.+++++++ +|+-.|.. +.||.+.|+|+|++|-..+++.. + +. |.|+.+. .+.++|.++|.+++.|+
T Consensus 297 ~l~~~ad~--vv~~SGg~-~~EA~a~g~PvV~~~~~~~~~e~---v-~~-g~~~lv~------~d~~~l~~ai~~ll~~~ 362 (403)
T 3ot5_A 297 NFLRKSYL--VFTDSGGV-QEEAPGMGVPVLVLRDTTERPEG---I-EA-GTLKLIG------TNKENLIKEALDLLDNK 362 (403)
T ss_dssp HHHHHEEE--EEECCHHH-HHHGGGTTCCEEECCSSCSCHHH---H-HH-TSEEECC------SCHHHHHHHHHHHHHCH
T ss_pred HHHHhcCE--EEECCccH-HHHHHHhCCCEEEecCCCcchhh---e-eC-CcEEEcC------CCHHHHHHHHHHHHcCH
Confidence 68866666 99887533 36999999999999776666542 3 43 8877763 27999999999999998
Q ss_pred HHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHHhh
Q 009851 459 DFKARALELKEKAMSSVREGGSSYKTFQNFLQWTMNALK 497 (524)
Q Consensus 459 ~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~i~~~~~ 497 (524)
+.+++..+-...+ ..++ +.+++++.|...+.
T Consensus 363 ~~~~~m~~~~~~~----g~~~----aa~rI~~~l~~~l~ 393 (403)
T 3ot5_A 363 ESHDKMAQAANPY----GDGF----AANRILAAIKSHFE 393 (403)
T ss_dssp HHHHHHHHSCCTT----CCSC----HHHHHHHHHHHHHT
T ss_pred HHHHHHHhhcCcc----cCCc----HHHHHHHHHHHHhC
Confidence 7665543322112 2233 35566666666554
No 35
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.13 E-value=5.1e-09 Score=105.92 Aligned_cols=116 Identities=9% Similarity=0.041 Sum_probs=81.5
Q ss_pred cCCeeEEeccChh---hhhcCCCcceEEe----cCC-hhhHHHHHHcCCceeccCcccchhhhHHhhccccceeeEEecC
Q 009851 366 AARGQMISWAPQL---RVLNHPSIACFLS----HCG-WNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRD 437 (524)
Q Consensus 366 ~~n~~v~~~vpq~---~lL~~~~v~~~It----HgG-~gs~~Eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~~~~~ 437 (524)
.+|+.+.+++|+. +++..+++ +|. +.| .+++.||+++|+|+|+.+. ......+.+. +.|..++.
T Consensus 262 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~~-~~g~~~~~- 333 (406)
T 2gek_A 262 AGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVLADG-DAGRLVPV- 333 (406)
T ss_dssp GGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHHTTT-TSSEECCT-
T ss_pred cCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHhcCC-CceEEeCC-
Confidence 5789999999985 78877777 663 334 3489999999999998765 4456666653 67777753
Q ss_pred CCCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHHhh
Q 009851 438 EGGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWTMNALK 497 (524)
Q Consensus 438 ~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~i~~~~~ 497 (524)
-+.+++.++|.++++|++.+++..+ ..++.+. .-+.....+.+.+.+++.++
T Consensus 334 ----~d~~~l~~~i~~l~~~~~~~~~~~~---~~~~~~~-~~s~~~~~~~~~~~~~~~~~ 385 (406)
T 2gek_A 334 ----DDADGMAAALIGILEDDQLRAGYVA---RASERVH-RYDWSVVSAQIMRVYETVSG 385 (406)
T ss_dssp ----TCHHHHHHHHHHHHHCHHHHHHHHH---HHHHHGG-GGBHHHHHHHHHHHHHHHCC
T ss_pred ----CCHHHHHHHHHHHHcCHHHHHHHHH---HHHHHHH-hCCHHHHHHHHHHHHHHHHh
Confidence 4799999999999998865443322 2222222 23556667777777777765
No 36
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.07 E-value=4e-09 Score=105.62 Aligned_cols=159 Identities=13% Similarity=0.150 Sum_probs=93.5
Q ss_pred CceEEEeecCCCCCCHHHHHHHHHHHhcC-----CCCEEEEEcCCCCCCCCCCCChhhHHhhc--CCeeEEeccChh---
Q 009851 309 SSVVYVSFGSFTILDQVQFQELALGLELC-----KRPFLWVVRPDITTDANDRYPEGFQERVA--ARGQMISWAPQL--- 378 (524)
Q Consensus 309 ~~vV~vs~GS~~~~~~~~~~~l~~al~~~-----~~~~iw~~~~~~~~~~~~~l~~~~~~~~~--~n~~v~~~vpq~--- 378 (524)
+++++++.|...... +.+..+++|+... +.++++ +.+. ...+.+.+.+... +|+.+.+++++.
T Consensus 205 ~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~~i~--~~g~----~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~ 277 (375)
T 3beo_A 205 NRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQVVY--PVHM----NPVVRETANDILGDYGRIHLIEPLDVIDFH 277 (375)
T ss_dssp SEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEEEEE--ECCS----CHHHHHHHHHHHTTCTTEEEECCCCHHHHH
T ss_pred CCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeEEEE--eCCC----CHHHHHHHHHHhhccCCEEEeCCCCHHHHH
Confidence 457777777643222 3455666666432 344443 3220 0011122222223 688887777654
Q ss_pred hhhcCCCcceEEecCChhhHHHHHHcCCceeccCcccchhhhHHhhccccceeeEEecCCCCCCCHHHHHHHHHHHhcCH
Q 009851 379 RVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQ 458 (524)
Q Consensus 379 ~lL~~~~v~~~ItHgG~gs~~Eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~~~~~~~~~~t~~~l~~ai~~~l~~~ 458 (524)
++++.+++ ||+..| +.+.||+++|+|+|+.+..+... ..+ +. |.|..++ . +.++|.++|.++++|+
T Consensus 278 ~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~~---e~v-~~-g~g~~v~-----~-d~~~la~~i~~ll~~~ 343 (375)
T 3beo_A 278 NVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTERP---EGI-EA-GTLKLAG-----T-DEETIFSLADELLSDK 343 (375)
T ss_dssp HHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSCH---HHH-HT-TSEEECC-----S-CHHHHHHHHHHHHHCH
T ss_pred HHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCCc---eee-cC-CceEEcC-----C-CHHHHHHHHHHHHhCh
Confidence 78877777 998874 55889999999999986544332 234 43 8887763 2 7999999999999988
Q ss_pred HHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHHh
Q 009851 459 DFKARALELKEKAMSSVREGGSSYKTFQNFLQWTMNAL 496 (524)
Q Consensus 459 ~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~i~~~~ 496 (524)
+.+++. ++..++. .++ ...++.++.+++.+
T Consensus 344 ~~~~~~---~~~~~~~-~~~----~~~~~i~~~~~~~~ 373 (375)
T 3beo_A 344 EAHDKM---SKASNPY-GDG----RASERIVEAILKHF 373 (375)
T ss_dssp HHHHHH---CCCCCTT-CCS----CHHHHHHHHHHHHT
T ss_pred HhHhhh---hhcCCCC-CCC----cHHHHHHHHHHHHh
Confidence 655433 2222322 112 23555666665544
No 37
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.03 E-value=5.2e-08 Score=97.26 Aligned_cols=135 Identities=16% Similarity=0.242 Sum_probs=88.2
Q ss_pred CceEEEeecCCCCCCHHHHHHHHHHHhcCCC----C-EEEEEcCCCCCCCCCCCChhhHH---h--hcCCeeEEeccChh
Q 009851 309 SSVVYVSFGSFTILDQVQFQELALGLELCKR----P-FLWVVRPDITTDANDRYPEGFQE---R--VAARGQMISWAPQL 378 (524)
Q Consensus 309 ~~vV~vs~GS~~~~~~~~~~~l~~al~~~~~----~-~iw~~~~~~~~~~~~~l~~~~~~---~--~~~n~~v~~~vpq~ 378 (524)
+..+++..|+... ......+++++..... . -++.++.+ . .+.+.+ . +.+|+.+.++..+.
T Consensus 195 ~~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~~l~i~G~g----~----~~~~~~~~~~~~~~~~v~~~g~~~~~ 264 (374)
T 2iw1_A 195 QQNLLLQVGSDFG--RKGVDRSIEALASLPESLRHNTLLFVVGQD----K----PRKFEALAEKLGVRSNVHFFSGRNDV 264 (374)
T ss_dssp TCEEEEEECSCTT--TTTHHHHHHHHHTSCHHHHHTEEEEEESSS----C----CHHHHHHHHHHTCGGGEEEESCCSCH
T ss_pred CCeEEEEeccchh--hcCHHHHHHHHHHhHhccCCceEEEEEcCC----C----HHHHHHHHHHcCCCCcEEECCCcccH
Confidence 4477788887632 2344556666655432 1 23334433 1 122222 2 24788888876543
Q ss_pred -hhhcCCCcceEEe----cCChhhHHHHHHcCCceeccCcccchhhhHHhhccccceeeEEecCCCCCCCHHHHHHHHHH
Q 009851 379 -RVLNHPSIACFLS----HCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQ 453 (524)
Q Consensus 379 -~lL~~~~v~~~It----HgG~gs~~Eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~~~~~~~~~~t~~~l~~ai~~ 453 (524)
++++.+++ +|. -|..+++.||+++|+|+|+.+. ..+...+++. +.|..++ ..-+.+++.++|.+
T Consensus 265 ~~~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~~-~~g~~~~----~~~~~~~l~~~i~~ 333 (374)
T 2iw1_A 265 SELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYIADA-NCGTVIA----EPFSQEQLNEVLRK 333 (374)
T ss_dssp HHHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHHHHH-TCEEEEC----SSCCHHHHHHHHHH
T ss_pred HHHHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhhccC-CceEEeC----CCCCHHHHHHHHHH
Confidence 68877777 665 4667899999999999999765 3455667664 7888884 12579999999999
Q ss_pred HhcCHHHHHHH
Q 009851 454 VLGNQDFKARA 464 (524)
Q Consensus 454 ~l~~~~~r~~a 464 (524)
+++|++.+++.
T Consensus 334 l~~~~~~~~~~ 344 (374)
T 2iw1_A 334 ALTQSPLRMAW 344 (374)
T ss_dssp HHHCHHHHHHH
T ss_pred HHcChHHHHHH
Confidence 99988655443
No 38
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=98.94 E-value=2.6e-07 Score=93.79 Aligned_cols=84 Identities=12% Similarity=0.004 Sum_probs=62.9
Q ss_pred cCCeeEEeccC---hh---hhhcCCCcceEEecC----ChhhHHHHHHcCCceeccCcccchhhhHHhhccccceeeEEe
Q 009851 366 AARGQMISWAP---QL---RVLNHPSIACFLSHC----GWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFD 435 (524)
Q Consensus 366 ~~n~~v~~~vp---q~---~lL~~~~v~~~ItHg----G~gs~~Eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~~~ 435 (524)
.+|+.+.+|++ +. ++++.+++ +|.-. ..+++.||+++|+|+|+.+. ..+...+.+. +.|..+
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~-~~g~l~- 363 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDG-ETGFLV- 363 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBT-TTEEEE-
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecC-CCeEEE-
Confidence 47899999876 22 67766776 66543 45689999999999998664 3466667663 678777
Q ss_pred cCCCCCCCHHHHHHHHHHHhcCHHHHHH
Q 009851 436 RDEGGIITREEIKNKVDQVLGNQDFKAR 463 (524)
Q Consensus 436 ~~~~~~~t~~~l~~ai~~~l~~~~~r~~ 463 (524)
. +.+++.++|.++++|++.+++
T Consensus 364 ----~--d~~~la~~i~~ll~~~~~~~~ 385 (416)
T 2x6q_A 364 ----R--DANEAVEVVLYLLKHPEVSKE 385 (416)
T ss_dssp ----S--SHHHHHHHHHHHHHCHHHHHH
T ss_pred ----C--CHHHHHHHHHHHHhCHHHHHH
Confidence 2 789999999999998865443
No 39
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.78 E-value=1e-07 Score=95.69 Aligned_cols=130 Identities=13% Similarity=0.095 Sum_probs=83.7
Q ss_pred CceEEEeecCCCCCC-HHHHHHHHHHHhcC----CCCEEEEEcCCCCCCCCCCCChhhHHh---h--cCCeeEEeccCh-
Q 009851 309 SSVVYVSFGSFTILD-QVQFQELALGLELC----KRPFLWVVRPDITTDANDRYPEGFQER---V--AARGQMISWAPQ- 377 (524)
Q Consensus 309 ~~vV~vs~GS~~~~~-~~~~~~l~~al~~~----~~~~iw~~~~~~~~~~~~~l~~~~~~~---~--~~n~~v~~~vpq- 377 (524)
++.|+++.|...... .+.+..+++++.+. +..+|+..... ..+.+.+. . .+|+.+.+.+++
T Consensus 203 ~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~--------~~~~l~~~~~~~~~~~~v~l~~~lg~~ 274 (385)
T 4hwg_A 203 KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPR--------TKKRLEDLEGFKELGDKIRFLPAFSFT 274 (385)
T ss_dssp TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHH--------HHHHHHTSGGGGGTGGGEEECCCCCHH
T ss_pred CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChH--------HHHHHHHHHHHhcCCCCEEEEcCCCHH
Confidence 558888887653332 24566677776432 56777765321 11111111 1 357888765554
Q ss_pred --hhhhcCCCcceEEecCChhhHHHHHHcCCceeccCcccchhhhHHhhccccceeeEEecCCCCCCCHHHHHHHHHHHh
Q 009851 378 --LRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVL 455 (524)
Q Consensus 378 --~~lL~~~~v~~~ItHgG~gs~~Eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~~~~~~~~~~t~~~l~~ai~~~l 455 (524)
..+++++++ +||-.|. .+.||.+.|+|+|+++...+-+. .+ +. |.++.+. .+.++|.+++.+++
T Consensus 275 ~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e---~v-~~-G~~~lv~------~d~~~i~~ai~~ll 340 (385)
T 4hwg_A 275 DYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE---GM-DA-GTLIMSG------FKAERVLQAVKTIT 340 (385)
T ss_dssp HHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH---HH-HH-TCCEECC------SSHHHHHHHHHHHH
T ss_pred HHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh---hh-hc-CceEEcC------CCHHHHHHHHHHHH
Confidence 478977777 9999876 46999999999999987654222 23 43 8776663 37999999999999
Q ss_pred cCHHH
Q 009851 456 GNQDF 460 (524)
Q Consensus 456 ~~~~~ 460 (524)
+|+..
T Consensus 341 ~d~~~ 345 (385)
T 4hwg_A 341 EEHDN 345 (385)
T ss_dssp TTCBT
T ss_pred hChHH
Confidence 88743
No 40
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.64 E-value=5e-06 Score=86.09 Aligned_cols=162 Identities=9% Similarity=-0.004 Sum_probs=94.6
Q ss_pred eEEEeecCCCC-CCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCChh---hHHhhcCCee-EEeccChh---hhhc
Q 009851 311 VVYVSFGSFTI-LDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEG---FQERVAARGQ-MISWAPQL---RVLN 382 (524)
Q Consensus 311 vV~vs~GS~~~-~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~---~~~~~~~n~~-v~~~vpq~---~lL~ 382 (524)
.+++..|.... ...+.+-+.+..+.+.+.++++.-++. ..+.+. ..+..++|+. +.++ ++. ++++
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~------~~~~~~l~~~~~~~~~~v~~~~g~-~~~~~~~~~~ 364 (485)
T 1rzu_A 292 PLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGD------VALEGALLAAASRHHGRVGVAIGY-NEPLSHLMQA 364 (485)
T ss_dssp CEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBC------HHHHHHHHHHHHHTTTTEEEEESC-CHHHHHHHHH
T ss_pred eEEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeCCc------hHHHHHHHHHHHhCCCcEEEecCC-CHHHHHHHHh
Confidence 57778887643 223333333333333366666553221 001112 2223346887 5677 543 5787
Q ss_pred CCCcceEEe----cCChhhHHHHHHcCCceeccCcccchhhhHHhhcccc---------ceeeEEecCCCCCCCHHHHHH
Q 009851 383 HPSIACFLS----HCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFW---------KVGLKFDRDEGGIITREEIKN 449 (524)
Q Consensus 383 ~~~v~~~It----HgG~gs~~Eal~~GvP~v~~P~~~DQ~~na~rv~~~l---------G~G~~~~~~~~~~~t~~~l~~ 449 (524)
.+++ +|. -|...++.||+++|+|+|+... ......+.+ - +.|..++. -+.+++.+
T Consensus 365 ~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v~~-~~~~~~~~~~~~G~l~~~-----~d~~~la~ 432 (485)
T 1rzu_A 365 GCDA--IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTVID-ANHAALASKAATGVQFSP-----VTLDGLKQ 432 (485)
T ss_dssp HCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCB-CCHHHHHTTCCCBEEESS-----CSHHHHHH
T ss_pred cCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhheecc-cccccccccCCcceEeCC-----CCHHHHHH
Confidence 7776 663 2345689999999999998654 345555554 2 47777753 47899999
Q ss_pred HHHHHh---cCHHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHHhh
Q 009851 450 KVDQVL---GNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWTMNALK 497 (524)
Q Consensus 450 ai~~~l---~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~i~~~~~ 497 (524)
+|.+++ .|++.+++.. +..++ +.-+.....+++.+..++++.
T Consensus 433 ~i~~ll~~~~~~~~~~~~~---~~~~~---~~fs~~~~~~~~~~~y~~~~~ 477 (485)
T 1rzu_A 433 AIRRTVRYYHDPKLWTQMQ---KLGMK---SDVSWEKSAGLYAALYSQLIS 477 (485)
T ss_dssp HHHHHHHHHTCHHHHHHHH---HHHHT---CCCBHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhCCHHHHHHHH---HHHHH---HhCChHHHHHHHHHHHHHhhC
Confidence 999999 6776554333 33332 344555566666666666554
No 41
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.57 E-value=6.2e-06 Score=89.82 Aligned_cols=86 Identities=12% Similarity=0.103 Sum_probs=59.1
Q ss_pred cCCeeEEe----ccChhhhhc----CCCcceEEec----CChhhHHHHHHcCCceeccCcccchhhhHHhhccccceeeE
Q 009851 366 AARGQMIS----WAPQLRVLN----HPSIACFLSH----CGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLK 433 (524)
Q Consensus 366 ~~n~~v~~----~vpq~~lL~----~~~v~~~ItH----gG~gs~~Eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~ 433 (524)
.+++.+.+ ++|+.++.. .+++ ||.- |-..++.||+++|+|+|+. |-......+.+. +.|+.
T Consensus 639 ~~~V~flG~~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV~dg-~~Gll 711 (816)
T 3s28_A 639 NGQFRWISSQMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVHG-KSGFH 711 (816)
T ss_dssp BBBEEEECCCCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHCCBT-TTBEE
T ss_pred CCcEEEccCccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHHccC-CcEEE
Confidence 47888887 445555443 3445 6632 3456899999999999985 444466667663 67888
Q ss_pred EecCCCCCCCHHHHHHHHHHHh----cCHHHHHH
Q 009851 434 FDRDEGGIITREEIKNKVDQVL----GNQDFKAR 463 (524)
Q Consensus 434 ~~~~~~~~~t~~~l~~ai~~~l----~~~~~r~~ 463 (524)
++. -+.++++++|.+++ .|++.+++
T Consensus 712 v~p-----~D~e~LA~aI~~lL~~Ll~d~~~~~~ 740 (816)
T 3s28_A 712 IDP-----YHGDQAADTLADFFTKCKEDPSHWDE 740 (816)
T ss_dssp ECT-----TSHHHHHHHHHHHHHHHHHCTHHHHH
T ss_pred eCC-----CCHHHHHHHHHHHHHHhccCHHHHHH
Confidence 864 47899999997776 77754443
No 42
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.54 E-value=2.7e-05 Score=78.59 Aligned_cols=114 Identities=10% Similarity=0.046 Sum_probs=75.2
Q ss_pred eeEEeccChh---hhhcCCCcceEEe----cCChhhHHHHHHcCCceeccCcccchhhhHHhhccccce-----------
Q 009851 369 GQMISWAPQL---RVLNHPSIACFLS----HCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKV----------- 430 (524)
Q Consensus 369 ~~v~~~vpq~---~lL~~~~v~~~It----HgG~gs~~Eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~----------- 430 (524)
+.+.+|+|+. ++++.+++ +|. -|...++.||+++|+|+|+.... .....+.+. ..
T Consensus 256 v~~~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~~----g~~e~v~~~-~~~~i~~~~~~~~ 328 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAVG----GADDYFSGD-CVYKIKPSAWISV 328 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECCH----HHHHHSCTT-TSEEECCCEEEEC
T ss_pred eeccCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCCC----ChHHHHccC-ccccccccccccc
Confidence 5556999965 57767776 663 23355899999999999986543 344444331 11
Q ss_pred ----ee--EEecCCCCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHHhhc
Q 009851 431 ----GL--KFDRDEGGIITREEIKNKVDQVLGNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWTMNALKK 498 (524)
Q Consensus 431 ----G~--~~~~~~~~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~i~~~~~~ 498 (524)
|. .+.. -+.+++.++| +++.|++.+++. ++..++.+.+.-+.+...+++.+.++++++.
T Consensus 329 ~~~~G~~gl~~~-----~d~~~la~~i-~l~~~~~~~~~~---~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~ 393 (413)
T 3oy2_A 329 DDRDGIGGIEGI-----IDVDDLVEAF-TFFKDEKNRKEY---GKRVQDFVKTKPTWDDISSDIIDFFNSLLRV 393 (413)
T ss_dssp TTTCSSCCEEEE-----CCHHHHHHHH-HHTTSHHHHHHH---HHHHHHHHTTSCCHHHHHHHHHHHHHHHTC-
T ss_pred ccccCcceeeCC-----CCHHHHHHHH-HHhcCHHHHHHH---HHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 55 5543 3899999999 999988665433 3333333334557777788888888887753
No 43
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.47 E-value=2.1e-05 Score=81.35 Aligned_cols=161 Identities=12% Similarity=0.060 Sum_probs=93.0
Q ss_pred ceEEEeecCCCCCCHHHHHHHHHHH---hcCCCCEEEEEcCCCCCCCCCCCChhh---HHhhcCCee-EEeccChh---h
Q 009851 310 SVVYVSFGSFTILDQVQFQELALGL---ELCKRPFLWVVRPDITTDANDRYPEGF---QERVAARGQ-MISWAPQL---R 379 (524)
Q Consensus 310 ~vV~vs~GS~~~~~~~~~~~l~~al---~~~~~~~iw~~~~~~~~~~~~~l~~~~---~~~~~~n~~-v~~~vpq~---~ 379 (524)
..+++..|.... ......+++|+ .+.+.+++++-++. ..+.+.+ .+..++|+. +.++ ++. +
T Consensus 292 ~~~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~l~ivG~g~------~~~~~~l~~~~~~~~~~v~~~~g~-~~~~~~~ 362 (485)
T 2qzs_A 292 VPLFAVVSRLTS--QKGLDLVLEALPGLLEQGGQLALLGAGD------PVLQEGFLAAAAEYPGQVGVQIGY-HEAFSHR 362 (485)
T ss_dssp SCEEEEEEEESG--GGCHHHHHHHHHHHHHTTCEEEEEEEEC------HHHHHHHHHHHHHSTTTEEEEESC-CHHHHHH
T ss_pred CeEEEEeccCcc--ccCHHHHHHHHHHHhhCCcEEEEEeCCc------hHHHHHHHHHHHhCCCcEEEeCCC-CHHHHHH
Confidence 366777786532 22333444444 33366665543221 0011222 223346786 5677 443 6
Q ss_pred hhcCCCcceEEec----CChhhHHHHHHcCCceeccCcccchhhhHHhhcccc---------ceeeEEecCCCCCCCHHH
Q 009851 380 VLNHPSIACFLSH----CGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFW---------KVGLKFDRDEGGIITREE 446 (524)
Q Consensus 380 lL~~~~v~~~ItH----gG~gs~~Eal~~GvP~v~~P~~~DQ~~na~rv~~~l---------G~G~~~~~~~~~~~t~~~ 446 (524)
+++.+++ +|.- |...++.||+++|+|+|+... ......+.+ - +.|..++. -+.++
T Consensus 363 ~~~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v~~-~~~~~~~~~~~~G~l~~~-----~d~~~ 430 (485)
T 2qzs_A 363 IMGGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTVSD-CSLENLADGVASGFVFED-----SNAWS 430 (485)
T ss_dssp HHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCB-CCHHHHHTTCCCBEEECS-----SSHHH
T ss_pred HHHhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCccceecc-CccccccccccceEEECC-----CCHHH
Confidence 7877777 6632 345688999999999998754 345555554 2 47777754 47999
Q ss_pred HHHHHHHHh---cCHHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHHhh
Q 009851 447 IKNKVDQVL---GNQDFKARALELKEKAMSSVREGGSSYKTFQNFLQWTMNALK 497 (524)
Q Consensus 447 l~~ai~~~l---~~~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~i~~~~~ 497 (524)
+.++|.+++ .|++.+++.. +..++ +.-+.....+++.+..+++..
T Consensus 431 la~~i~~ll~~~~~~~~~~~~~---~~~~~---~~fs~~~~~~~~~~ly~~~~~ 478 (485)
T 2qzs_A 431 LLRAIRRAFVLWSRPSLWRFVQ---RQAMA---MDFSWQVAAKSYRELYYRLKL 478 (485)
T ss_dssp HHHHHHHHHHHHTSHHHHHHHH---HHHHH---CCCCHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHcCCHHHHHHHH---HHHHh---hcCCHHHHHHHHHHHHHHhhh
Confidence 999999999 6776554333 22222 344555556666665555543
No 44
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.43 E-value=0.0003 Score=74.16 Aligned_cols=119 Identities=9% Similarity=-0.051 Sum_probs=76.2
Q ss_pred CCeeEEeccChh---hhhcCCCcceEEe---cCChhhHHHHHHcCCceeccCcccchhhh-HHhhccccceeeEEecCCC
Q 009851 367 ARGQMISWAPQL---RVLNHPSIACFLS---HCGWNSTMEGVSNGIPFLCWPYFGDQFLN-ERYICDFWKVGLKFDRDEG 439 (524)
Q Consensus 367 ~n~~v~~~vpq~---~lL~~~~v~~~It---HgG~gs~~Eal~~GvP~v~~P~~~DQ~~n-a~rv~~~lG~G~~~~~~~~ 439 (524)
+++.+.+++|+. .+++..++ ||. .|+.+++.||+++|+|+|++|-..=.... +..+.+ .|+...+.
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~-~g~~e~v~---- 506 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHH-LGLDEMNV---- 506 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHH-HTCGGGBC----
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHH-CCChhhhc----
Confidence 788999999854 56767776 662 26677999999999999997643111111 223333 36554442
Q ss_pred CCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhh--hcCCCcHHHHHHHHHHHHHHhh
Q 009851 440 GIITREEIKNKVDQVLGNQDFKARALELKEKAMSSV--REGGSSYKTFQNFLQWTMNALK 497 (524)
Q Consensus 440 ~~~t~~~l~~ai~~~l~~~~~r~~a~~l~~~~~~~~--~~~g~~~~~~~~~~~~i~~~~~ 497 (524)
. +.+++.++|.++++|++.+++.. +..++.+ .+..+.....+.+.+.+++++.
T Consensus 507 ~--~~~~la~~i~~l~~~~~~~~~~~---~~~~~~~~~~~~f~~~~~~~~~~~~y~~~~~ 561 (568)
T 2vsy_A 507 A--DDAAFVAKAVALASDPAALTALH---ARVDVLRRASGVFHMDGFADDFGALLQALAR 561 (568)
T ss_dssp S--SHHHHHHHHHHHHHCHHHHHHHH---HHHHHHHHHSSTTCHHHHHHHHHHHHHHHHH
T ss_pred C--CHHHHHHHHHHHhcCHHHHHHHH---HHHHHhhhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 1 79999999999999987655433 3333322 2345555666666666666554
No 45
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.43 E-value=8.6e-07 Score=78.57 Aligned_cols=139 Identities=11% Similarity=0.061 Sum_probs=89.9
Q ss_pred eEEEeecCCCCCCHHHHHHHHHHHhcC-CCCEEEEEcCCCCCCCCCCCChhh---HHhhcCCeeEEeccCh---hhhhcC
Q 009851 311 VVYVSFGSFTILDQVQFQELALGLELC-KRPFLWVVRPDITTDANDRYPEGF---QERVAARGQMISWAPQ---LRVLNH 383 (524)
Q Consensus 311 vV~vs~GS~~~~~~~~~~~l~~al~~~-~~~~iw~~~~~~~~~~~~~l~~~~---~~~~~~n~~v~~~vpq---~~lL~~ 383 (524)
.+++..|+.. .......++++++.. +.++++.-... ....+.+-. ...+.+|+.+.+|+|+ ..+++.
T Consensus 24 ~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~l~i~G~~~----~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~ 97 (177)
T 2f9f_A 24 DFWLSVNRIY--PEKRIELQLEVFKKLQDEKLYIVGWFS----KGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSR 97 (177)
T ss_dssp SCEEEECCSS--GGGTHHHHHHHHHHCTTSCEEEEBCCC----TTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHH
T ss_pred CEEEEEeccc--cccCHHHHHHHHHhCCCcEEEEEecCc----cHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHh
Confidence 4566778764 233456677777665 55666543222 111111111 1123469999999998 478877
Q ss_pred CCcceEEe---cCCh-hhHHHHHHcCCceeccCcccchhhhHHhhccccceeeEEecCCCCCCCHHHHHHHHHHHhcCHH
Q 009851 384 PSIACFLS---HCGW-NSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQD 459 (524)
Q Consensus 384 ~~v~~~It---HgG~-gs~~Eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~~~~~~~~~~t~~~l~~ai~~~l~~~~ 459 (524)
+++ +|. +.|+ .++.||+++|+|+|+... ..+...+.+. +.|..+ . -+.+++.++|.++++|++
T Consensus 98 adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~-~~g~~~-~-----~d~~~l~~~i~~l~~~~~ 164 (177)
T 2f9f_A 98 CKG--LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETVINE-KTGYLV-N-----ADVNEIIDAMKKVSKNPD 164 (177)
T ss_dssp CSE--EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHCCBT-TTEEEE-C-----SCHHHHHHHHHHHHHCTT
T ss_pred CCE--EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHhcCC-CccEEe-C-----CCHHHHHHHHHHHHhCHH
Confidence 777 665 3344 499999999999998654 4556666663 678776 4 479999999999998876
Q ss_pred H-HHHHHHHH
Q 009851 460 F-KARALELK 468 (524)
Q Consensus 460 ~-r~~a~~l~ 468 (524)
. ++++++.+
T Consensus 165 ~~~~~~~~~a 174 (177)
T 2f9f_A 165 KFKKDCFRRA 174 (177)
T ss_dssp TTHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4 55555443
No 46
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.19 E-value=0.0006 Score=68.68 Aligned_cols=117 Identities=10% Similarity=0.048 Sum_probs=75.3
Q ss_pred eEEEeecCCCCCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeeEEeccChh---hhhcCCCcc
Q 009851 311 VVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQL---RVLNHPSIA 387 (524)
Q Consensus 311 vV~vs~GS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~vpq~---~lL~~~~v~ 387 (524)
.+++..|.... .+..+..+.+. ..+.++++ +|.+. ...+ .+.+|+.+.+++|+. ++++.+++
T Consensus 223 ~~i~~vGrl~~-~Kg~~~~l~~~--~~~~~l~i-vG~g~----~~~~------~l~~~V~f~G~~~~~~l~~~~~~adv- 287 (406)
T 2hy7_A 223 IHAVAVGSMLF-DPEFFVVASKA--FPQVTFHV-IGSGM----GRHP------GYGDNVIVYGEMKHAQTIGYIKHARF- 287 (406)
T ss_dssp EEEEEECCTTB-CHHHHHHHHHH--CTTEEEEE-ESCSS----CCCT------TCCTTEEEECCCCHHHHHHHHHTCSE-
T ss_pred cEEEEEecccc-ccCHHHHHHHh--CCCeEEEE-EeCch----HHhc------CCCCCEEEcCCCCHHHHHHHHHhcCE-
Confidence 67777888643 34442222221 23344443 34331 0111 135789999999976 57877777
Q ss_pred eEEe---c-CChhhHHHHH-------HcCCceeccCcccchhhhHHhhccccceeeE-EecCCCCCCCHHHHHHHHHHHh
Q 009851 388 CFLS---H-CGWNSTMEGV-------SNGIPFLCWPYFGDQFLNERYICDFWKVGLK-FDRDEGGIITREEIKNKVDQVL 455 (524)
Q Consensus 388 ~~It---H-gG~gs~~Eal-------~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~-~~~~~~~~~t~~~l~~ai~~~l 455 (524)
+|. + |-.+++.||+ ++|+|+|+... +.+. ..|.. ++. -+.+++.++|.+++
T Consensus 288 -~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~-~~G~l~v~~-----~d~~~la~ai~~ll 350 (406)
T 2hy7_A 288 -GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGP-YKSRFGYTP-----GNADSVIAAITQAL 350 (406)
T ss_dssp -EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCS-CSSEEEECT-----TCHHHHHHHHHHHH
T ss_pred -EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccC-cceEEEeCC-----CCHHHHHHHHHHHH
Confidence 553 2 3345789999 99999998755 5553 56776 654 47999999999999
Q ss_pred cCHH
Q 009851 456 GNQD 459 (524)
Q Consensus 456 ~~~~ 459 (524)
+|+.
T Consensus 351 ~~~~ 354 (406)
T 2hy7_A 351 EAPR 354 (406)
T ss_dssp HCCC
T ss_pred hCcc
Confidence 8876
No 47
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.98 E-value=3.8e-05 Score=83.25 Aligned_cols=168 Identities=15% Similarity=0.177 Sum_probs=106.3
Q ss_pred CCceEEEeecCCCCCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCChhhHHhh------cCCeeEEeccChhhhh
Q 009851 308 PSSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERV------AARGQMISWAPQLRVL 381 (524)
Q Consensus 308 ~~~vV~vs~GS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~------~~n~~v~~~vpq~~lL 381 (524)
++.+||.||.+....+++.+....+.|++.+...+|.+..+... ..++.+.. ++++.+.+.+|+.+-|
T Consensus 521 ~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~------~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l 594 (723)
T 4gyw_A 521 EDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVG------EPNIQQYAQNMGLPQNRIIFSPVAPKEEHV 594 (723)
T ss_dssp TTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGG------HHHHHHHHHHTTCCGGGEEEEECCCHHHHH
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHH------HHHHHHHHHhcCCCcCeEEECCCCCHHHHH
Confidence 36699999998888999999999999999999999988654111 11222111 4678888888877544
Q ss_pred c-CCCcceEEe---cCChhhHHHHHHcCCceeccCcccchh--hh-HHhhccccceeeEEecCCCCCCCHHHHHHHHHHH
Q 009851 382 N-HPSIACFLS---HCGWNSTMEGVSNGIPFLCWPYFGDQF--LN-ERYICDFWKVGLKFDRDEGGIITREEIKNKVDQV 454 (524)
Q Consensus 382 ~-~~~v~~~It---HgG~gs~~Eal~~GvP~v~~P~~~DQ~--~n-a~rv~~~lG~G~~~~~~~~~~~t~~~l~~ai~~~ 454 (524)
. +..++.++. .+|.+|+.|||+.|||+|.+| ++++ .. +..+.. +|+.-.+. -+.++-.+.-.++
T Consensus 595 ~~~~~~Di~LDt~p~~g~tT~~eal~~GvPvvt~~--g~~~~sR~~~s~l~~-~gl~e~ia------~~~~~Y~~~a~~l 665 (723)
T 4gyw_A 595 RRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMP--GETLASRVAASQLTC-LGCLELIA------KNRQEYEDIAVKL 665 (723)
T ss_dssp HHGGGCSEEECCSSSCCSHHHHHHHHTTCCEEBCC--CSSGGGTHHHHHHHH-HTCGGGBC------SSHHHHHHHHHHH
T ss_pred HHhCCCeEEeCCCCcCCHHHHHHHHHcCCCEEEcc--CCCccHhHHHHHHHH-cCCccccc------CCHHHHHHHHHHH
Confidence 3 233333665 789999999999999999998 3332 11 222333 46665443 2556655555566
Q ss_pred hcCHHHHHHHH-HHHHHHHhhhhcCCCcHHHHHHHHHHHHHHh
Q 009851 455 LGNQDFKARAL-ELKEKAMSSVREGGSSYKTFQNFLQWTMNAL 496 (524)
Q Consensus 455 l~~~~~r~~a~-~l~~~~~~~~~~~g~~~~~~~~~~~~i~~~~ 496 (524)
-+|.+.++..+ +|++...+ |+--+...+++.+|...
T Consensus 666 a~d~~~l~~lr~~l~~~~~~------s~l~d~~~~~~~le~a~ 702 (723)
T 4gyw_A 666 GTDLEYLKKVRGKVWKQRIS------SPLFNTKQYTMELERLY 702 (723)
T ss_dssp HHCHHHHHHHHHHHHHHHHH------SSTTCHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHHHHh------CcCcCHHHHHHHHHHHH
Confidence 66776555443 34444443 44334445555555543
No 48
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=97.95 E-value=0.00027 Score=70.39 Aligned_cols=93 Identities=16% Similarity=0.206 Sum_probs=62.4
Q ss_pred CeeEEeccChh-hhhcCCCcceEEe---c--CChhhHHHHHHcCCceeccCcccchhhhHHhhccccceeeEEecCCCCC
Q 009851 368 RGQMISWAPQL-RVLNHPSIACFLS---H--CGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGI 441 (524)
Q Consensus 368 n~~v~~~vpq~-~lL~~~~v~~~It---H--gG~gs~~Eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~~~~~~~~~ 441 (524)
++.+.++..+. .+++.+++ ++. . +|..++.||+++|+|+|+-|..++.......+.+. |.++..
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~-G~l~~~------- 330 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKE-GAGFEV------- 330 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHT-TCEEEC-------
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHC-CCEEEe-------
Confidence 45555544433 67755555 553 1 23478999999999999877777766666655443 776655
Q ss_pred CCHHHHHHHHHHHhcCH---HHHHHHHHHHHH
Q 009851 442 ITREEIKNKVDQVLGNQ---DFKARALELKEK 470 (524)
Q Consensus 442 ~t~~~l~~ai~~~l~~~---~~r~~a~~l~~~ 470 (524)
-+.++|.++|.++++|+ ++.+++++..+.
T Consensus 331 ~d~~~La~ai~~ll~d~~r~~mg~~ar~~~~~ 362 (374)
T 2xci_A 331 KNETELVTKLTELLSVKKEIKVEEKSREIKGC 362 (374)
T ss_dssp CSHHHHHHHHHHHHHSCCCCCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhHHHHHHHHHHHHHHHHh
Confidence 26899999999999871 355555555444
No 49
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.60 E-value=0.00076 Score=58.28 Aligned_cols=129 Identities=13% Similarity=0.215 Sum_probs=76.7
Q ss_pred ceEEEeecCCCCCCHHHHHHHHHHHhcCC----CCEEEEEcCCCCCCCCCCCChhh---HHhhcCCeeEEeccChh---h
Q 009851 310 SVVYVSFGSFTILDQVQFQELALGLELCK----RPFLWVVRPDITTDANDRYPEGF---QERVAARGQMISWAPQL---R 379 (524)
Q Consensus 310 ~vV~vs~GS~~~~~~~~~~~l~~al~~~~----~~~iw~~~~~~~~~~~~~l~~~~---~~~~~~n~~v~~~vpq~---~ 379 (524)
+++++..|.... ......+++++.... .++++ ++.+ ...+.+ .+....++.+ +|+|+. .
T Consensus 2 ~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i-~G~g-------~~~~~~~~~~~~~~~~v~~-g~~~~~~~~~ 70 (166)
T 3qhp_A 2 PFKIAMVGRYSN--EKNQSVLIKAVALSKYKQDIVLLL-KGKG-------PDEKKIKLLAQKLGVKAEF-GFVNSNELLE 70 (166)
T ss_dssp CEEEEEESCCST--TTTHHHHHHHHHTCTTGGGEEEEE-ECCS-------TTHHHHHHHHHHHTCEEEC-CCCCHHHHHH
T ss_pred ceEEEEEeccch--hcCHHHHHHHHHHhccCCCeEEEE-EeCC-------ccHHHHHHHHHHcCCeEEE-eecCHHHHHH
Confidence 377888887633 234455666665443 23333 3332 111222 2233447777 999976 5
Q ss_pred hhcCCCcceEEe----cCChhhHHHHHHcCC-ceeccCcccchhhhHHhhccccceeeEEecCCCCCCCHHHHHHHHHHH
Q 009851 380 VLNHPSIACFLS----HCGWNSTMEGVSNGI-PFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQV 454 (524)
Q Consensus 380 lL~~~~v~~~It----HgG~gs~~Eal~~Gv-P~v~~P~~~DQ~~na~rv~~~lG~G~~~~~~~~~~~t~~~l~~ai~~~ 454 (524)
+++.+++ +|. -|...++.||+++|+ |+|+.... ......+.+. +. .+.. -+.+++.++|.++
T Consensus 71 ~~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~---~~~~~~~~~~-~~--~~~~-----~~~~~l~~~i~~l 137 (166)
T 3qhp_A 71 ILKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPL---SATRQFALDE-RS--LFEP-----NNAKDLSAKIDWW 137 (166)
T ss_dssp HHTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTT---CGGGGGCSSG-GG--EECT-----TCHHHHHHHHHHH
T ss_pred HHHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCC---CchhhhccCC-ce--EEcC-----CCHHHHHHHHHHH
Confidence 7867776 664 244569999999996 99983322 2222233331 33 3322 4799999999999
Q ss_pred hcCHHHHH
Q 009851 455 LGNQDFKA 462 (524)
Q Consensus 455 l~~~~~r~ 462 (524)
+.|++.++
T Consensus 138 ~~~~~~~~ 145 (166)
T 3qhp_A 138 LENKLERE 145 (166)
T ss_dssp HHCHHHHH
T ss_pred HhCHHHHH
Confidence 99886443
No 50
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.49 E-value=0.0021 Score=57.32 Aligned_cols=82 Identities=9% Similarity=-0.034 Sum_probs=61.4
Q ss_pred CeeE-EeccChh---hhhcCCCcceEEecC----ChhhHHHHHHcCCceeccCcccchhhhHHhhccccceeeEEecCCC
Q 009851 368 RGQM-ISWAPQL---RVLNHPSIACFLSHC----GWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEG 439 (524)
Q Consensus 368 n~~v-~~~vpq~---~lL~~~~v~~~ItHg----G~gs~~Eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~~~~~~~ 439 (524)
|+.+ .+++|+. .++..+++ +|.-. ...++.||+++|+|+|+... ......+ +. +.|..++.
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~~-~~-~~g~~~~~--- 164 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-TN-ETGILVKA--- 164 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHC-CT-TTCEEECT---
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCC----CChHHHc-CC-CceEEecC---
Confidence 8999 8999954 67867776 66432 24689999999999988754 3445555 53 77877753
Q ss_pred CCCCHHHHHHHHHHHhc-CHHHHH
Q 009851 440 GIITREEIKNKVDQVLG-NQDFKA 462 (524)
Q Consensus 440 ~~~t~~~l~~ai~~~l~-~~~~r~ 462 (524)
-+.+++.++|.++++ |++.++
T Consensus 165 --~~~~~l~~~i~~l~~~~~~~~~ 186 (200)
T 2bfw_A 165 --GDPGELANAILKALELSRSDLS 186 (200)
T ss_dssp --TCHHHHHHHHHHHHHCCHHHHH
T ss_pred --CCHHHHHHHHHHHHhcCHHHHH
Confidence 479999999999999 876544
No 51
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.38 E-value=0.00093 Score=69.64 Aligned_cols=145 Identities=11% Similarity=0.021 Sum_probs=93.4
Q ss_pred CceEEEeecCCCCCCHHHHHHHHHHHhcCCCCEEEEE--cCCCCCCCCCCCChh-hHHhhcCCeeEEeccChhhhh---c
Q 009851 309 SSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVV--RPDITTDANDRYPEG-FQERVAARGQMISWAPQLRVL---N 382 (524)
Q Consensus 309 ~~vV~vs~GS~~~~~~~~~~~l~~al~~~~~~~iw~~--~~~~~~~~~~~l~~~-~~~~~~~n~~v~~~vpq~~lL---~ 382 (524)
+.++|.+|+......++.++...+.+++.+...+|.. +.+.+. ...+-.. ....+.+++.+.+.+|+.+.| .
T Consensus 440 G~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~--~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~y~ 517 (631)
T 3q3e_A 440 EVVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGI--THPYVERFIKSYLGDSATAHPHSPYHQYLRILH 517 (631)
T ss_dssp SEEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGG--GHHHHHHHHHHHHGGGEEEECCCCHHHHHHHHH
T ss_pred CeEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchh--hHHHHHHHHHcCCCccEEEcCCCCHHHHHHHHh
Confidence 3599999999888889999888888888777777743 322100 0000011 112345788888999877544 5
Q ss_pred CCCcceEE---ecCChhhHHHHHHcCCceeccCcccchhhh-HHhhccccceeeE-EecCCCCCCCHHHHHHHHHHHhcC
Q 009851 383 HPSIACFL---SHCGWNSTMEGVSNGIPFLCWPYFGDQFLN-ERYICDFWKVGLK-FDRDEGGIITREEIKNKVDQVLGN 457 (524)
Q Consensus 383 ~~~v~~~I---tHgG~gs~~Eal~~GvP~v~~P~~~DQ~~n-a~rv~~~lG~G~~-~~~~~~~~~t~~~l~~ai~~~l~~ 457 (524)
..++ |+ ..+|.+|+.||++.|||+|+++--.=--.. +..+.. +|+.-. +. -+.++..+...++.+|
T Consensus 518 ~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~-~GLpE~LIA------~d~eeYv~~Av~La~D 588 (631)
T 3q3e_A 518 NCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKR-LGLPEWLIA------NTVDEYVERAVRLAEN 588 (631)
T ss_dssp TCSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHH-TTCCGGGEE------SSHHHHHHHHHHHHHC
T ss_pred cCcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHh-cCCCcceec------CCHHHHHHHHHHHhCC
Confidence 5555 44 347889999999999999998743211111 122333 466542 43 3688888888899889
Q ss_pred HHHHHHH
Q 009851 458 QDFKARA 464 (524)
Q Consensus 458 ~~~r~~a 464 (524)
++.+++.
T Consensus 589 ~~~l~~L 595 (631)
T 3q3e_A 589 HQERLEL 595 (631)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8765544
No 52
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=96.93 E-value=0.019 Score=56.22 Aligned_cols=105 Identities=21% Similarity=0.175 Sum_probs=73.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCcChhhHHHhhhcCCCCCCCeE-EEecCCCCCCCCCcccH
Q 009851 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDYNHKRVVESLQGKNYLGEQIH-LVSIPDGMEPWEDRNDL 78 (524)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~LA~~L~~r--GH~Vt~~~~~~~~~~i~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~ 78 (524)
+..||+++-..+.|++.-...+.+.|.++ +.+|++++.+.+.+.++.. +.++ ++.++.. ..
T Consensus 7 ~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~--------p~vd~vi~~~~~--------~~ 70 (349)
T 3tov_A 7 DYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYN--------PNIDELIVVDKK--------GR 70 (349)
T ss_dssp TTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSC--------TTCSEEEEECCS--------SH
T ss_pred CCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC--------CCccEEEEeCcc--------cc
Confidence 46799999999999999999999999997 8999999999888777554 4554 5555421 00
Q ss_pred HHHHHHHHHhccHHHHHHHHHHhcCCCCCc-cEEEECCCchhHHHHHHHcCCceEE
Q 009851 79 GKLIEKCLQVMPGKLEELIEEINSREDEKI-DCFIADGNIGWSMEIAKKMNVRGAV 133 (524)
Q Consensus 79 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~-D~vI~D~~~~~~~~~A~~lgiP~i~ 133 (524)
...+. .+..+++.++. .++ |++|.=....-...++...|+|..+
T Consensus 71 ~~~~~--------~~~~l~~~Lr~---~~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 71 HNSIS--------GLNEVAREINA---KGKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp HHHHH--------HHHHHHHHHHH---HCCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred cccHH--------HHHHHHHHHhh---CCCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 00011 12344555555 689 9998654445556678888998755
No 53
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=96.82 E-value=0.088 Score=51.24 Aligned_cols=103 Identities=11% Similarity=0.068 Sum_probs=68.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCcChhhHHHhhhcCCCCCCCe-EEEecCCCCCCCCCcccHHH
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDYNHKRVVESLQGKNYLGEQI-HLVSIPDGMEPWEDRNDLGK 80 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~r--GH~Vt~~~~~~~~~~i~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~~ 80 (524)
+||+++.....|++.-...+.+.|.++ |.+|++++.+.+.+.++.. +.+ +++.++.. .. ..
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~~--------p~i~~v~~~~~~--~~--~~---- 64 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRM--------PEVNEAIPMPLG--HG--AL---- 64 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTC--------TTEEEEEEC---------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC--------CccCEEEEecCC--cc--cc----
Confidence 479999988889999999999999987 9999999998777766443 345 34544311 00 00
Q ss_pred HHHHHHHhccHHHHHHHHHHhcCCCCCccEEEECCCchhHHHHHHHcCCceEE
Q 009851 81 LIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAV 133 (524)
Q Consensus 81 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~i~ 133 (524)
....+.++.+.++. .++|++|.=........++...|+|..+
T Consensus 65 --------~~~~~~~l~~~l~~---~~~D~vid~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 65 --------EIGERRKLGHSLRE---KRYDRAYVLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp --------CHHHHHHHHHHTTT---TTCSEEEECSCCSGGGHHHHHTTCSEEE
T ss_pred --------chHHHHHHHHHHHh---cCCCEEEECCCChHHHHHHHHhCCCEEe
Confidence 01123456666665 7899988322233455677888999743
No 54
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=96.67 E-value=0.0023 Score=62.52 Aligned_cols=94 Identities=14% Similarity=0.129 Sum_probs=69.4
Q ss_pred CeeEEeccChhhh---hcCCCcceEEecCCh---------hhHHHHHHcCCceeccCcccchhhhHHhhccccceeeEEe
Q 009851 368 RGQMISWAPQLRV---LNHPSIACFLSHCGW---------NSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFD 435 (524)
Q Consensus 368 n~~v~~~vpq~~l---L~~~~v~~~ItHgG~---------gs~~Eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~~~ 435 (524)
|+.+.+|+|+.++ |+..+.+++.+-+.. +-+.|++++|+|+|+.+ ...++..+++. |+|+.++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~~-~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIENN-GLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHHH-TCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHhC-CeEEEeC
Confidence 8999999999865 444455444422322 35889999999999755 45677788885 9999884
Q ss_pred cCCCCCCCHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHh
Q 009851 436 RDEGGIITREEIKNKVDQVLGNQ--DFKARALELKEKAMS 473 (524)
Q Consensus 436 ~~~~~~~t~~~l~~ai~~~l~~~--~~r~~a~~l~~~~~~ 473 (524)
+.+++.++|.++..++ ++++|+++.++++++
T Consensus 290 -------~~~e~~~~i~~l~~~~~~~m~~na~~~a~~~~~ 322 (339)
T 3rhz_A 290 -------DVEEAIMKVKNVNEDEYIELVKNVRSFNPILRK 322 (339)
T ss_dssp -------SHHHHHHHHHHCCHHHHHHHHHHHHHHTHHHHT
T ss_pred -------CHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhc
Confidence 4688889998865432 688899999888875
No 55
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=95.47 E-value=0.0098 Score=59.86 Aligned_cols=85 Identities=11% Similarity=0.042 Sum_probs=58.2
Q ss_pred cCCeeEEeccChh---hhhcCCCcceEEecC---C-hhhHHHHHHcCCceeccCcccchhhhHHhhccccceeeEEecCC
Q 009851 366 AARGQMISWAPQL---RVLNHPSIACFLSHC---G-WNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDE 438 (524)
Q Consensus 366 ~~n~~v~~~vpq~---~lL~~~~v~~~ItHg---G-~gs~~Eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~~~~~~ 438 (524)
..|+.+.+++|+. ++++.+++ ||.-. | ..++.||+++|+|+|+ -..+ ....+.+. ..|+.++.
T Consensus 294 ~~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v~~~-~~G~lv~~-- 363 (413)
T 2x0d_A 294 GIHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLSNWH-SNIVSLEQ-- 363 (413)
T ss_dssp TEEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGGGTB-TTEEEESS--
T ss_pred cCcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhhhcC-CCEEEeCC--
Confidence 3678888999877 57767777 66421 3 3468999999999997 2222 22345542 56887754
Q ss_pred CCCCCHHHHHHHHHHHhcCHHHHHH
Q 009851 439 GGIITREEIKNKVDQVLGNQDFKAR 463 (524)
Q Consensus 439 ~~~~t~~~l~~ai~~~l~~~~~r~~ 463 (524)
-+.++|+++|.++++|++.+++
T Consensus 364 ---~d~~~la~ai~~ll~~~~~~~~ 385 (413)
T 2x0d_A 364 ---LNPENIAETLVELCMSFNNRDV 385 (413)
T ss_dssp ---CSHHHHHHHHHHHHHHTC----
T ss_pred ---CCHHHHHHHHHHHHcCHHHHHH
Confidence 5799999999999988776655
No 56
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=93.77 E-value=0.3 Score=50.69 Aligned_cols=138 Identities=7% Similarity=0.024 Sum_probs=76.8
Q ss_pred CceEEEeecCCCC-CCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeeEEeccChh---hhhcCC
Q 009851 309 SSVVYVSFGSFTI-LDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQL---RVLNHP 384 (524)
Q Consensus 309 ~~vV~vs~GS~~~-~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~vpq~---~lL~~~ 384 (524)
+.++++..|.... ...+.+-+.+..+.+.+.++++...++. .....-.......+.++.+....++. .+++.+
T Consensus 326 ~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~a 402 (536)
T 3vue_A 326 KIPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKK---KFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGA 402 (536)
T ss_dssp TSCEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBCH---HHHHHHHHHHHHSTTTEEEECSCCHHHHHHHHHHC
T ss_pred CCcEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccCc---hHHHHHHHHHhhcCCceEEEEeccHHHHHHHHHhh
Confidence 4467777887632 2333333333333444566665433220 00000112233456788888777765 467666
Q ss_pred CcceEEec---CCh-hhHHHHHHcCCceeccCcccchhhhHHhhccccceeeEEecCCC-----CCCCHHHHHHHHHHHh
Q 009851 385 SIACFLSH---CGW-NSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEG-----GIITREEIKNKVDQVL 455 (524)
Q Consensus 385 ~v~~~ItH---gG~-gs~~Eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~~~~~~~-----~~~t~~~l~~ai~~~l 455 (524)
++ ||.= =|. .+++||+++|+|+|+-.. ......|.+. ..|........ ...+.++|.++|+++|
T Consensus 403 D~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~----gG~~e~V~dg-~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral 475 (536)
T 3vue_A 403 DV--LAVPSRFEPCGLIQLQGMRYGTPCACAST----GGLVDTVIEG-KTGFHMGRLSVDCKVVEPSDVKKVAATLKRAI 475 (536)
T ss_dssp SE--EEECCSCCSSCSHHHHHHHTTCCEEECSC----THHHHHCCBT-TTEEECCCCCSCTTCCCHHHHHHHHHHHHHHH
T ss_pred he--eecccccCCCCHHHHHHHHcCCCEEEcCC----CCchheeeCC-CCccccccCCCceeEECCCCHHHHHHHHHHHH
Confidence 66 6642 132 489999999999998654 3455556553 45554332110 1135789999999887
Q ss_pred c
Q 009851 456 G 456 (524)
Q Consensus 456 ~ 456 (524)
.
T Consensus 476 ~ 476 (536)
T 3vue_A 476 K 476 (536)
T ss_dssp H
T ss_pred H
Confidence 4
No 57
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=87.89 E-value=1.4 Score=40.26 Aligned_cols=113 Identities=17% Similarity=0.163 Sum_probs=63.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcChhhHHHhhhcCCCCCCCeEEEecCCCCCCCCCcccHHHHHH
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIE 83 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 83 (524)
+|||+.---+. |---+..|+++|.+.| +|+++.+...++.+-... .....+++..+..... ......+.....
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~si----t~~~pl~~~~~~~~~~-~~v~GTPaDCV~ 74 (251)
T 2phj_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSL----TFTEPLKMRKIDTDFY-TVIDGTPADCVH 74 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSC----CCSSCEEEEEEETTEE-EETTCCHHHHHH
T ss_pred CEEEEECCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCccCCccce----ecCCCeEEEEecCCCe-EEECCCHHHHHH
Confidence 57777664443 4445778899999988 999999987765542221 1223455554443211 111222322222
Q ss_pred HHHHhccHHHHHHHHHHhcCCCCCccEEEEC----------CCchh---HHHHHHHcCCceEEEcc
Q 009851 84 KCLQVMPGKLEELIEEINSREDEKIDCFIAD----------GNIGW---SMEIAKKMNVRGAVFWP 136 (524)
Q Consensus 84 ~~~~~~~~~~~~ll~~l~~~~~~~~D~vI~D----------~~~~~---~~~~A~~lgiP~i~~~~ 136 (524)
.. +..++.. .+||+||+. .+++. ++.-|..+|||.|.++.
T Consensus 75 la-------l~~l~~~------~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 127 (251)
T 2phj_A 75 LG-------YRVILEE------KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp HH-------HHTTTTT------CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred HH-------HHHhcCC------CCCCEEEECCcCCCcCCCCCccchHHHHHHHHHHcCCCeEEEEc
Confidence 22 1222211 579999964 23332 34456778999999875
No 58
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=85.61 E-value=8.4 Score=33.72 Aligned_cols=98 Identities=10% Similarity=0.049 Sum_probs=65.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcC------hhhHHHhhhcCCCCCCCeEEEecCCCCCCCCCcc
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYN------HKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRN 76 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~------~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 76 (524)
+-.|++.+..+.|-..-.+.+|-+.+.+|++|.|+..-.. ...++.. ++++.....++.-. ..
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~L---------~v~~~~~g~gf~~~--~~ 96 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEPH---------GVEFQVMATGFTWE--TQ 96 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGGG---------TCEEEECCTTCCCC--GG
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHhC---------CcEEEEcccccccC--CC
Confidence 3468888988999999999999999999999999954321 1223222 58888887755422 11
Q ss_pred cHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEECCCch
Q 009851 77 DLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG 118 (524)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~D~vI~D~~~~ 118 (524)
...+ -.......+....+.+.+ .++|+||.|....
T Consensus 97 ~~~~----~~~~a~~~l~~a~~~l~~---~~yDlvILDEi~~ 131 (196)
T 1g5t_A 97 NREA----DTAACMAVWQHGKRMLAD---PLLDMVVLDELTY 131 (196)
T ss_dssp GHHH----HHHHHHHHHHHHHHHTTC---TTCSEEEEETHHH
T ss_pred CcHH----HHHHHHHHHHHHHHHHhc---CCCCEEEEeCCCc
Confidence 1111 112234556666666655 7899999998755
No 59
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=82.57 E-value=3.2 Score=38.02 Aligned_cols=113 Identities=17% Similarity=0.168 Sum_probs=60.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcChhhHHHhhhcCCCCCCCeEEEecCCCCCCCCCcccHHHHHH
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIE 83 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 83 (524)
.|||+.---+. +--=+..|+++|.+.| +|+++.+...++.+-... .....+++..+..... ......+.....
T Consensus 2 p~ILlTNDDGi-~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg~g~si----T~~~pl~~~~~~~~~~-~~v~GTPaDCV~ 74 (251)
T 2wqk_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSL----TFTEPLKMRKIDTDFY-TVIDGTPADCVH 74 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSC----CCSSCEEEEEEETTEE-EETTCCHHHHHH
T ss_pred CEEEEEcCCCC-CcHHHHHHHHHHHhCC-CEEEEeeCCCCcccccCc----CCCCCceeEEeeccce-eecCCChHHHHh
Confidence 46676664433 2234567899999888 599999887665442211 1123455544332110 001122222221
Q ss_pred HHHHhccHHHHHHHHHHhcCCCCCccEEEE----------CCCch---hHHHHHHHcCCceEEEcc
Q 009851 84 KCLQVMPGKLEELIEEINSREDEKIDCFIA----------DGNIG---WSMEIAKKMNVRGAVFWP 136 (524)
Q Consensus 84 ~~~~~~~~~~~~ll~~l~~~~~~~~D~vI~----------D~~~~---~~~~~A~~lgiP~i~~~~ 136 (524)
.. +..++. + .+||+||+ |.+++ +++.-|..+|||.|.++.
T Consensus 75 la-------l~~~l~---~---~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~ 127 (251)
T 2wqk_A 75 LG-------YRVILE---E---KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp HH-------HHTTTT---T---CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred hh-------hhhhcC---C---CCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEc
Confidence 11 122222 2 68999998 33333 345556788999999874
No 60
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=82.17 E-value=0.88 Score=47.16 Aligned_cols=37 Identities=27% Similarity=0.425 Sum_probs=28.4
Q ss_pred CCEEEEEcC--------CCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 3 RPRVLVMPA--------PAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 3 ~~~il~~~~--------~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
++||+|++. |+-|++ .-+|+++|+++||+|+++++..
T Consensus 9 ~MkIl~vs~E~~P~~K~GGLadv--v~~L~~aL~~~G~~V~Vi~P~Y 53 (536)
T 3vue_A 9 HMNVVFVGAEMAPWSKTGGLGDV--LGGLPPAMAANGHRVMVISPRY 53 (536)
T ss_dssp CCEEEEECSCBTTTBCSSHHHHH--HHHHHHHHHTTTCEEEEEEECC
T ss_pred CcEEEEEEEeccchhccCcHHHH--HHHHHHHHHHcCCeEEEEecCc
Confidence 689999962 233343 5578999999999999999653
No 61
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=82.11 E-value=10 Score=32.00 Aligned_cols=109 Identities=15% Similarity=0.182 Sum_probs=66.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcChhhHHHhhhcCCCCCCCeEEEecCCCCCCCCCcccHHHHH
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLI 82 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 82 (524)
+.||++.+.++-.|-....-++..|...|++|.........+.+.+.... .+.+.+.++.....
T Consensus 18 ~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p~e~lv~aa~~-----~~~diV~lS~~~~~----------- 81 (161)
T 2yxb_A 18 RYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQTPEQVAMAAVQ-----EDVDVIGVSILNGA----------- 81 (161)
T ss_dssp SCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCCHHHHHHHHHH-----TTCSEEEEEESSSC-----------
T ss_pred CCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHh-----cCCCEEEEEeechh-----------
Confidence 46899999999999999999999999999999998765443333222110 24444444322211
Q ss_pred HHHHHhccHHHHHHHHHHhcCCCCCccEEEECCCchhHHHHHHHcCCceEE
Q 009851 83 EKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAV 133 (524)
Q Consensus 83 ~~~~~~~~~~~~~ll~~l~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~i~ 133 (524)
....++++++.+++.+....-++|.......-...++..|+-.+.
T Consensus 82 ------~~~~~~~~i~~L~~~g~~~i~v~vGG~~~~~~~~~l~~~G~d~v~ 126 (161)
T 2yxb_A 82 ------HLHLMKRLMAKLRELGADDIPVVLGGTIPIPDLEPLRSLGIREIF 126 (161)
T ss_dssp ------HHHHHHHHHHHHHHTTCTTSCEEEEECCCHHHHHHHHHTTCCEEE
T ss_pred ------hHHHHHHHHHHHHhcCCCCCEEEEeCCCchhcHHHHHHCCCcEEE
Confidence 112344555555543212344666665443344457789998544
No 62
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=80.69 E-value=2.5 Score=34.69 Aligned_cols=43 Identities=12% Similarity=0.189 Sum_probs=38.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcCh
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNH 43 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~ 43 (524)
|++.||++.+.++-.|-....-++..|..+|++|..+......
T Consensus 1 ~~~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~~p~ 43 (137)
T 1ccw_A 1 MEKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSPQ 43 (137)
T ss_dssp CCCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEECH
T ss_pred CCCCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCCCCH
Confidence 7888999999999999999999999999999999988765443
No 63
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=78.85 E-value=20 Score=28.51 Aligned_cols=33 Identities=15% Similarity=0.159 Sum_probs=19.6
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEE
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFV 37 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~ 37 (524)
|++.+|+++- .|-.-...+.+.|.+.|++|..+
T Consensus 2 m~~~~iLivd----d~~~~~~~l~~~L~~~g~~v~~~ 34 (136)
T 3t6k_A 2 MKPHTLLIVD----DDDTVAEMLELVLRGAGYEVRRA 34 (136)
T ss_dssp -CCCEEEEEC----SCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCEEEEEe----CCHHHHHHHHHHHHHCCCEEEEe
Confidence 5566676664 34444556666677777776543
No 64
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=78.51 E-value=15 Score=32.17 Aligned_cols=45 Identities=16% Similarity=0.248 Sum_probs=36.0
Q ss_pred cHHHHHHHHHHhcCCCCCccEEEECCCchhHHHHHHHcCCceEEEccchHH
Q 009851 90 PGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPSSAA 140 (524)
Q Consensus 90 ~~~~~~ll~~l~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~ 140 (524)
...++..++++.+ .++|+||.|. .+..+|+++|+|.+.+.++..+
T Consensus 128 ~~e~~~~i~~l~~---~G~~vvVG~~---~~~~~A~~~Gl~~vli~sg~eS 172 (196)
T 2q5c_A 128 EDEITTLISKVKT---ENIKIVVSGK---TVTDEAIKQGLYGETINSGEES 172 (196)
T ss_dssp GGGHHHHHHHHHH---TTCCEEEECH---HHHHHHHHTTCEEEECCCCHHH
T ss_pred HHHHHHHHHHHHH---CCCeEEECCH---HHHHHHHHcCCcEEEEecCHHH
Confidence 4566778888877 7899999984 4689999999999998875543
No 65
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=78.51 E-value=4.7 Score=36.72 Aligned_cols=36 Identities=14% Similarity=0.220 Sum_probs=28.4
Q ss_pred CCEEEEEcC--CCccCHHHHHHHHHHHHhCCCEEEEEe
Q 009851 3 RPRVLVMPA--PAQGHVIPLLEFSQCLAKHGFRVTFVN 38 (524)
Q Consensus 3 ~~~il~~~~--~~~GH~~p~l~LA~~L~~rGH~Vt~~~ 38 (524)
+.|.+|++. ...|-..-...|++.|.++|.+|.++=
T Consensus 20 m~k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~fK 57 (242)
T 3qxc_A 20 QGHMLFISATNTNAGKTTCARLLAQYCNACGVKTILLK 57 (242)
T ss_dssp CCEEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred cCcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEEe
Confidence 445565553 344888999999999999999999985
No 66
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=78.45 E-value=1.1 Score=44.55 Aligned_cols=39 Identities=15% Similarity=0.261 Sum_probs=29.5
Q ss_pred CCEEEEEcCCCc-----cCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 3 RPRVLVMPAPAQ-----GHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 3 ~~~il~~~~~~~-----GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
++||++++.... |=......+|++|+++||+|++++...
T Consensus 46 ~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 46 GKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDA 89 (413)
T ss_dssp SCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSC
T ss_pred CceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecC
Confidence 578986663311 323568899999999999999999864
No 67
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=78.14 E-value=2.4 Score=37.66 Aligned_cols=47 Identities=21% Similarity=0.268 Sum_probs=38.3
Q ss_pred CC-CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcChhhHHH
Q 009851 1 MS-RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVE 48 (524)
Q Consensus 1 m~-~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~i~~ 48 (524)
|+ ++||++--.|+.|-+. ...|.+.|.++|++|.++.++.....+..
T Consensus 1 m~~~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~fi~~ 48 (209)
T 3zqu_A 1 MSGPERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQLVMAT 48 (209)
T ss_dssp CCSCSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHHHHHH
T ss_pred CCCCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHHHHHH
Confidence 65 5688877777766666 89999999999999999999877766654
No 68
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=76.57 E-value=11 Score=34.27 Aligned_cols=110 Identities=12% Similarity=0.139 Sum_probs=62.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcChhhHHHhhhcCCCCCCCeEEEecCCCC-----CCCCCcccHH
Q 009851 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGM-----EPWEDRNDLG 79 (524)
Q Consensus 5 ~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~i~~~~~~~~~-----~~~~~~~~~~ 79 (524)
|||+.---+. |--=+..|+++|.+.| +|+++.+...++.+-... .....+++..++.+. ........+.
T Consensus 2 ~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~si----Tl~~pl~~~~~~~~~~~~~~~~~~v~GTPa 75 (244)
T 2e6c_A 2 RILVTNDDGI-YSPGLWALAEAASQFG-EVFVAAPDTEQSAAGHAI----TIAHPVRAYPHPSPLHAPHFPAYRVRGTPA 75 (244)
T ss_dssp EEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEECSSCCCCCSSC----CCSSCBEEEECCCCTTSCCCCEEEEESCHH
T ss_pred eEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccc----cCCCCeEEEEeccCcCCCCCceEEEcCcHH
Confidence 5665553333 3333678899998888 999999987765542221 122456676665421 1111123333
Q ss_pred HHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEEC----------CCch---hHHHHHHHcCCceEEEcc
Q 009851 80 KLIEKCLQVMPGKLEELIEEINSREDEKIDCFIAD----------GNIG---WSMEIAKKMNVRGAVFWP 136 (524)
Q Consensus 80 ~~~~~~~~~~~~~~~~ll~~l~~~~~~~~D~vI~D----------~~~~---~~~~~A~~lgiP~i~~~~ 136 (524)
......+ . + . .+||+||+. .+++ +++.-|..+|||.|.++.
T Consensus 76 DCV~lal-------~-----l-~---~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 129 (244)
T 2e6c_A 76 DCVALGL-------H-----L-F---GPVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFGLSAAAFSV 129 (244)
T ss_dssp HHHHHHH-------H-----H-S---CSCCEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHH-------c-----C-C---CCCCEEEECCccCCCCCcCeechHhHHHHHHHHhcCCCeEEEec
Confidence 3333222 1 2 2 689999963 2222 244456778999999875
No 69
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=75.52 E-value=17 Score=28.22 Aligned_cols=34 Identities=24% Similarity=0.346 Sum_probs=22.6
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEe
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVN 38 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~ 38 (524)
|++.||+++- .+-.-.-.|.+.|.+.|++|..+.
T Consensus 1 M~~~~ilivd----d~~~~~~~l~~~L~~~g~~v~~~~ 34 (127)
T 3i42_A 1 MSLQQALIVE----DYQAAAETFKELLEMLGFQADYVM 34 (127)
T ss_dssp -CCEEEEEEC----SCHHHHHHHHHHHHHTTEEEEEES
T ss_pred CCcceEEEEc----CCHHHHHHHHHHHHHcCCCEEEEC
Confidence 6677777765 455566667777777788776543
No 70
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=75.49 E-value=26 Score=27.86 Aligned_cols=35 Identities=23% Similarity=0.238 Sum_probs=24.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~ 39 (524)
|++.||+++- .+-.-...|.+.|.+.|++|..+..
T Consensus 1 M~~~~ilivd----d~~~~~~~l~~~l~~~g~~v~~~~~ 35 (143)
T 3jte_A 1 MSLAKILVID----DESTILQNIKFLLEIDGNEVLTASS 35 (143)
T ss_dssp --CCEEEEEC----SCHHHHHHHHHHHHHTTCEEEEESS
T ss_pred CCCCEEEEEc----CCHHHHHHHHHHHHhCCceEEEeCC
Confidence 7788888876 5566667778888888888775543
No 71
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=74.98 E-value=2.6 Score=35.13 Aligned_cols=35 Identities=14% Similarity=0.151 Sum_probs=28.6
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
|.+.||+++-. |++- ..+++.|.++||+|+++...
T Consensus 1 ~~~~~vlI~G~---G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 1 HRKDHFIVCGH---SILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCCSCEEEECC---SHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCCCcEEEECC---CHHH--HHHHHHHHHCCCCEEEEECC
Confidence 78889998854 4433 78899999999999999874
No 72
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=74.91 E-value=17 Score=34.38 Aligned_cols=46 Identities=17% Similarity=0.166 Sum_probs=41.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCcChhhHHHh
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDYNHKRVVES 49 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~r--GH~Vt~~~~~~~~~~i~~~ 49 (524)
+||+++-..+.|++.-...+.++|.++ +.+|++++.+.+.+.++..
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~ 48 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPSWH 48 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHHTS
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHhcC
Confidence 489999999999999999999999987 8999999999888777654
No 73
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=74.67 E-value=16 Score=31.15 Aligned_cols=144 Identities=17% Similarity=0.148 Sum_probs=78.3
Q ss_pred CceEEEeecCCCCCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeeEEeccChhhhhcCCCcce
Q 009851 309 SSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIAC 388 (524)
Q Consensus 309 ~~vV~vs~GS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~vpq~~lL~~~~v~~ 388 (524)
+|.|-|-+||.+ +...+++..+.|+..+..+-..+-.- ...|+.+.+ |+-.. ....++.
T Consensus 22 kp~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V~SA------HRtp~~l~~----------~~~~a---~~~g~~V 80 (181)
T 4b4k_A 22 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSA------HRTPDYMFE----------YAETA---RERGLKV 80 (181)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTSHHHHHH----------HHHHT---TTTTCCE
T ss_pred CccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEEEcc------ccChHHHHH----------HHHHH---HhcCceE
Confidence 457888899865 56778889999999998876555433 233443321 11111 1122334
Q ss_pred EEecCChh----hHHHHHHcCCceeccCcccchh------hhHHhhccccceeeE-EecCCCCCCCHHHHHHHHHHHhcC
Q 009851 389 FLSHCGWN----STMEGVSNGIPFLCWPYFGDQF------LNERYICDFWKVGLK-FDRDEGGIITREEIKNKVDQVLGN 457 (524)
Q Consensus 389 ~ItHgG~g----s~~Eal~~GvP~v~~P~~~DQ~------~na~rv~~~lG~G~~-~~~~~~~~~t~~~l~~ai~~~l~~ 457 (524)
+|.=.|.- ++..+ ..-+|+|.+|...... .-.-++-. |+.+. +..++....++.-++..|- .+.|
T Consensus 81 iIa~AG~aahLpGvvAa-~T~~PVIGVPv~s~~l~G~DsLlSivQMP~--GvpVaTvaig~~ga~NAallA~qIL-a~~d 156 (181)
T 4b4k_A 81 IIAGAGGAAHLPGMVAA-KTNLPVIGVPVQSKALNGLDSLLSIVQMPG--GVPVATVAIGKAGSTNAGLLAAQIL-GSFH 156 (181)
T ss_dssp EEEEECSSCCHHHHHHT-TCCSCEEEEECCCTTTTTHHHHHHHHTCCT--TCCCEECCSSHHHHHHHHHHHHHHH-TTTC
T ss_pred EEEeccccccchhhHHh-cCCCCEEEEecCCCCccchhhHHHHHhCCC--CCceEEEecCCccHHHHHHHHHHHH-ccCC
Confidence 66655532 33333 4568999999965321 11222332 44432 2211000112333444442 2468
Q ss_pred HHHHHHHHHHHHHHHhhhhc
Q 009851 458 QDFKARALELKEKAMSSVRE 477 (524)
Q Consensus 458 ~~~r~~a~~l~~~~~~~~~~ 477 (524)
++++++.+..++..++.+.+
T Consensus 157 ~~l~~kl~~~r~~~~~~v~~ 176 (181)
T 4b4k_A 157 DDIHDALELRREAIEKDVRE 176 (181)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 89999998888888775443
No 74
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=74.34 E-value=16 Score=34.96 Aligned_cols=34 Identities=24% Similarity=0.142 Sum_probs=23.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~ 39 (524)
|.++||+|+. --+....+.++|.++||+|..+.+
T Consensus 20 ~~~mrIvf~G-----~~~fa~~~L~~L~~~~~~i~~Vvt 53 (329)
T 2bw0_A 20 FQSMKIAVIG-----QSLFGQEVYCHLRKEGHEVVGVFT 53 (329)
T ss_dssp -CCCEEEEEC-----CHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCCEEEEEc-----CcHHHHHHHHHHHHCCCeEEEEEe
Confidence 4568999982 223444577899999999877665
No 75
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=73.92 E-value=23 Score=37.41 Aligned_cols=46 Identities=13% Similarity=0.029 Sum_probs=32.0
Q ss_pred CCeeEE---eccChh---------hhhcCCCcceEEecC---C-hhhHHHHHHcCCceeccCcc
Q 009851 367 ARGQMI---SWAPQL---------RVLNHPSIACFLSHC---G-WNSTMEGVSNGIPFLCWPYF 414 (524)
Q Consensus 367 ~n~~v~---~~vpq~---------~lL~~~~v~~~ItHg---G-~gs~~Eal~~GvP~v~~P~~ 414 (524)
++|+++ .|++.. ++++.+++ ||.-. | ..+.+||+++|+|+|+.-..
T Consensus 490 drVKVIf~P~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~g 551 (725)
T 3nb0_A 490 DRVKMIFHPEFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVS 551 (725)
T ss_dssp CSEEEEECCSCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTB
T ss_pred CceeEEEeccccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCC
Confidence 556554 788764 57766666 66432 3 35899999999999986554
No 76
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=73.84 E-value=14 Score=36.20 Aligned_cols=36 Identities=14% Similarity=0.143 Sum_probs=27.7
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
|+..||+++..+.. .+.+++++.+.|++|.++..+.
T Consensus 5 ~~~~~ilI~g~g~~-----~~~~~~a~~~~G~~~v~v~~~~ 40 (403)
T 4dim_A 5 YDNKRLLILGAGRG-----QLGLYKAAKELGIHTIAGTMPN 40 (403)
T ss_dssp -CCCEEEEECCCGG-----GHHHHHHHHHHTCEEEEEECSS
T ss_pred cCCCEEEEECCcHh-----HHHHHHHHHHCCCEEEEEcCCC
Confidence 46778998876643 3669999999999999997643
No 77
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=73.60 E-value=3.2 Score=36.64 Aligned_cols=44 Identities=16% Similarity=-0.014 Sum_probs=35.5
Q ss_pred CCCEEEEEcCCCccCHH-HHHHHHHHHHhCCCEEEEEeCCcChhhH
Q 009851 2 SRPRVLVMPAPAQGHVI-PLLEFSQCLAKHGFRVTFVNTDYNHKRV 46 (524)
Q Consensus 2 ~~~~il~~~~~~~GH~~-p~l~LA~~L~~rGH~Vt~~~~~~~~~~i 46 (524)
+..||++--.|+ +..+ =.+.+.+.|.++|++|+++.++.....+
T Consensus 6 ~~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~~~i 50 (201)
T 3lqk_A 6 AGKHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHTVQTTD 50 (201)
T ss_dssp TTCEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSCSCCTT
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChhHHHHH
Confidence 367888887777 5555 7899999999999999999998765444
No 78
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=73.26 E-value=25 Score=27.77 Aligned_cols=34 Identities=18% Similarity=0.139 Sum_probs=23.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEe
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVN 38 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~ 38 (524)
|++.+|+++- .+-.-...|.+.|.+.|++|..+.
T Consensus 1 m~~~~ilivd----d~~~~~~~l~~~L~~~g~~v~~~~ 34 (140)
T 2qr3_A 1 MSLGTIIIVD----DNKGVLTAVQLLLKNHFSKVITLS 34 (140)
T ss_dssp -CCCEEEEEC----SCHHHHHHHHHHHTTTSSEEEEEC
T ss_pred CCCceEEEEe----CCHHHHHHHHHHHHhCCcEEEEeC
Confidence 7777888776 455556667777777788877543
No 79
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=72.96 E-value=3 Score=39.75 Aligned_cols=134 Identities=10% Similarity=0.003 Sum_probs=74.0
Q ss_pred CceEEEeecCC---CCCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeeEEec--cChh-hhhc
Q 009851 309 SSVVYVSFGSF---TILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISW--APQL-RVLN 382 (524)
Q Consensus 309 ~~vV~vs~GS~---~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~--vpq~-~lL~ 382 (524)
++.|.+.-|+. -..+.+.+.++++.|.+.+.+++...+.. .+..+-+.+.+.. .++.+.+- +.+. ++++
T Consensus 178 ~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~----~e~~~~~~i~~~~-~~~~l~g~~sl~el~ali~ 252 (326)
T 2gt1_A 178 GEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAP----HEEERAKRLAEGF-AYVEVLPKMSLEGVARVLA 252 (326)
T ss_dssp TSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSH----HHHHHHHHHHTTC-TTEEECCCCCHHHHHHHHH
T ss_pred CCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCH----HHHHHHHHHHhhC-CcccccCCCCHHHHHHHHH
Confidence 45788877865 34678889999998876677766543322 0000111111111 23333332 3333 7897
Q ss_pred CCCcceEEecCChhhHHHHHHcCCceecc--CcccchhhhHHhhcccccee-eEEe-c-CCCCCCCHHHHHHHHHHHhcC
Q 009851 383 HPSIACFLSHCGWNSTMEGVSNGIPFLCW--PYFGDQFLNERYICDFWKVG-LKFD-R-DEGGIITREEIKNKVDQVLGN 457 (524)
Q Consensus 383 ~~~v~~~ItHgG~gs~~Eal~~GvP~v~~--P~~~DQ~~na~rv~~~lG~G-~~~~-~-~~~~~~t~~~l~~ai~~~l~~ 457 (524)
++++ +|+.- .|.+.=|.+.|+|+|++ |..... ++- +|-. ..+. . .--..++.+++.+++.++|.+
T Consensus 253 ~a~l--~I~~D-SG~~HlAaa~g~P~v~lfg~t~p~~--~~P-----~~~~~~~~~~~~~cm~~I~~~~V~~~i~~~l~~ 322 (326)
T 2gt1_A 253 GAKF--VVSVD-TGLSHLTAALDRPNITVYGPTDPGL--IGG-----YGKNQMVCRAPGNELSQLTANAVKQFIEENAEK 322 (326)
T ss_dssp TCSE--EEEES-SHHHHHHHHTTCCEEEEESSSCHHH--HCC-----CSSSEEEEECGGGCGGGCCHHHHHHHHHHTTTT
T ss_pred hCCE--EEecC-CcHHHHHHHcCCCEEEEECCCChhh--cCC-----CCCCceEecCCcccccCCCHHHHHHHHHHHHHH
Confidence 7666 99983 23344466799999987 432111 110 0111 1111 0 001458999999999999864
No 80
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=71.99 E-value=4.1 Score=35.00 Aligned_cols=42 Identities=12% Similarity=0.109 Sum_probs=33.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcChhhH
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRV 46 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~i 46 (524)
+||++.-.|+.+=. -...+.+.|.++|++|+++.++.....+
T Consensus 6 k~IllgvTGs~aa~-k~~~ll~~L~~~g~~V~vv~T~~A~~fi 47 (175)
T 3qjg_A 6 ENVLICLCGSVNSI-NISHYIIELKSKFDEVNVIASTNGRKFI 47 (175)
T ss_dssp CEEEEEECSSGGGG-GHHHHHHHHTTTCSEEEEEECTGGGGGS
T ss_pred CEEEEEEeCHHHHH-HHHHHHHHHHHCCCEEEEEECcCHHHHh
Confidence 57887776775555 4889999999999999999998766554
No 81
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=71.74 E-value=36 Score=27.42 Aligned_cols=30 Identities=10% Similarity=0.142 Sum_probs=17.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEE
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTF 36 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~ 36 (524)
+.+|+++- .+-.-...|.+.|.+.|++|..
T Consensus 7 ~~~iLivd----d~~~~~~~l~~~L~~~g~~v~~ 36 (154)
T 2rjn_A 7 NYTVMLVD----DEQPILNSLKRLIKRLGCNIIT 36 (154)
T ss_dssp CCEEEEEC----SCHHHHHHHHHHHHTTTCEEEE
T ss_pred CCeEEEEc----CCHHHHHHHHHHHHHcCCeEEE
Confidence 45666554 3444455566666666666653
No 82
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=71.49 E-value=14 Score=33.65 Aligned_cols=112 Identities=10% Similarity=0.099 Sum_probs=60.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcChhhHHHhhhcCCCCCCCeEEEecCCCC--CCCCCcccHHHHH
Q 009851 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGM--EPWEDRNDLGKLI 82 (524)
Q Consensus 5 ~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~ 82 (524)
|||+.---+. |--=+..|+++|.+.| +|+++.+...++.+-... .....+++..++.+. ........+....
T Consensus 2 ~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~si----Tl~~pl~~~~~~~~~~~~~~~v~GTPaDCV 75 (247)
T 1j9j_A 2 RILVTNDDGI-QSKGIIVLAELLSEEH-EVFVVAPDKERSATGHSI----TIHVPLWMKKVFISERVVAYSTTGTPADCV 75 (247)
T ss_dssp EEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCC----CCSSCCCEEECCCSSSEEEEEESSCHHHHH
T ss_pred eEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccc----cCCCCeEEEEeccCCCCceEEECCcHHHHH
Confidence 5665553333 3334678899998888 999999988765543321 112245555554320 0011112232222
Q ss_pred HHHHHhccHHHHHHHHHHhcCCCCCccEEEEC----------CCch---hHHHHHHHcCCceEEEcc
Q 009851 83 EKCLQVMPGKLEELIEEINSREDEKIDCFIAD----------GNIG---WSMEIAKKMNVRGAVFWP 136 (524)
Q Consensus 83 ~~~~~~~~~~~~~ll~~l~~~~~~~~D~vI~D----------~~~~---~~~~~A~~lgiP~i~~~~ 136 (524)
... +..+.. .+||+||+. .+++ +++.-|..+|||.|.++.
T Consensus 76 ~la-----------l~~l~~---~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 128 (247)
T 1j9j_A 76 KLA-----------YNVVMD---KRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISS 128 (247)
T ss_dssp HHH-----------HHTTST---TCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHH-----------HHhhcc---CCCCEEEECCccCCCCCcCeecchhHHHHHHHHhcCCCeEEEec
Confidence 222 222222 589999963 2222 234456778999999875
No 83
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=71.40 E-value=21 Score=30.84 Aligned_cols=81 Identities=19% Similarity=0.251 Sum_probs=51.7
Q ss_pred EEE-EE-cCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcChhhHHHhhhcCCCCCCCeEEEecCCCCCCCCCcccHHHHH
Q 009851 5 RVL-VM-PAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLI 82 (524)
Q Consensus 5 ~il-~~-~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 82 (524)
|++ |. +-|+.|-..-...||..|+++|++|.++-.+.......-... ...++.+...+.
T Consensus 2 ~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~~~~~~~~~~~----~~~~~~~~~~~~--------------- 62 (206)
T 4dzz_A 2 KVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDPQMSLTNWSKA----GKAAFDVFTAAS--------------- 62 (206)
T ss_dssp EEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHTT----SCCSSEEEECCS---------------
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCCCCCHHHHHhc----CCCCCcEEecCc---------------
Confidence 344 44 356779999999999999999999999987654332221111 112344443321
Q ss_pred HHHHHhccHHHHHHHHHHhcCCCCCccEEEECCC
Q 009851 83 EKCLQVMPGKLEELIEEINSREDEKIDCFIADGN 116 (524)
Q Consensus 83 ~~~~~~~~~~~~~ll~~l~~~~~~~~D~vI~D~~ 116 (524)
..+.++++.+. ..+|+||.|.-
T Consensus 63 --------~~l~~~l~~l~----~~yD~viiD~~ 84 (206)
T 4dzz_A 63 --------EKDVYGIRKDL----ADYDFAIVDGA 84 (206)
T ss_dssp --------HHHHHTHHHHT----TTSSEEEEECC
T ss_pred --------HHHHHHHHHhc----CCCCEEEEECC
Confidence 34556666654 46999999964
No 84
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=70.59 E-value=17 Score=33.24 Aligned_cols=111 Identities=12% Similarity=0.140 Sum_probs=61.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcChhhHHHhhhcCCCCCCCeEEEecCCCCCCCCCc-ccHHHHH
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDR-NDLGKLI 82 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~ 82 (524)
+|||+.---+. |--=+..|+++|.+.| +|+++.+...++.+-... .....++...+... ..... ..+....
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~L~~~g-~V~VVAP~~~~Sg~g~ai----Tl~~Pl~~~~~~~~--~~~v~~GTPaDCV 73 (254)
T 2v4n_A 2 MRILLSNDDGV-HAPGIQTLAKALREFA-DVQVVAPDRNRSGASNSL----TLESSLRTFTFDNG--DIAVQMGTPTDCV 73 (254)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCC----CCSSCCEEEECTTS--CEEEETCCHHHHH
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhCC-cEEEEeeCCCCcCccCCc----CCCCCeEEEEeCCC--CeEECCCCHHHHH
Confidence 46666664443 3344677899998875 999999988765543321 11234555554211 11112 2333332
Q ss_pred HHHHHhccHHHHHHHHHHhcCCCCCccEEEEC----------CCchhHHHH---HHHcCCceEEEcc
Q 009851 83 EKCLQVMPGKLEELIEEINSREDEKIDCFIAD----------GNIGWSMEI---AKKMNVRGAVFWP 136 (524)
Q Consensus 83 ~~~~~~~~~~~~~ll~~l~~~~~~~~D~vI~D----------~~~~~~~~~---A~~lgiP~i~~~~ 136 (524)
... +..+.. .+||+||+. .+++.+..+ |..+|||.|.++.
T Consensus 74 ~la-----------l~~ll~---~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 126 (254)
T 2v4n_A 74 YLG-----------VNALMR---PRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSL 126 (254)
T ss_dssp HHH-----------HHTTSS---SCCSEEEEEEEESCCCGGGGGGCHHHHHHHTTTTSSSCEEEEEE
T ss_pred HHH-----------HhhccC---CCCCEeeeCCcCCCCCCCCeeccHHHHHHHHHHhcCCCeEEEec
Confidence 222 122222 689999963 333333333 4558999999875
No 85
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=70.50 E-value=14 Score=34.20 Aligned_cols=112 Identities=11% Similarity=0.035 Sum_probs=60.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcChhhHHHhhhcCCCCCCCeEEEecCCC-CCCCCCcccHHHHHH
Q 009851 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDG-MEPWEDRNDLGKLIE 83 (524)
Q Consensus 5 ~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~ 83 (524)
|||+.---+. +--=+..|+++|.+.| +|+++.+...++.+-... .....+++..++.+ .........+.....
T Consensus 2 ~ILlTNDDGi-~ApGi~aL~~aL~~~g-~V~VVAP~~~qSg~g~si----Tl~~pl~~~~~~~~~~~~~~v~GTPaDCV~ 75 (280)
T 1l5x_A 2 KILVTNDDGV-HSPGLRLLYQFALSLG-DVDVVAPESPKSATGLGI----TLHKPLRMYEVDLCGFRAIATSGTPSDTVY 75 (280)
T ss_dssp EEEEECSSCT-TCHHHHHHHHHHGGGS-EEEEEEESSCTTTSCSSC----CCSSCBCEEEEECSSSEEEEESSCHHHHHH
T ss_pred eEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccc----cCCCCeEEEEeccCCCceEEECCcHHHHHH
Confidence 5665553333 3334678899999888 999999988765543221 11223444444321 000111122222222
Q ss_pred HHHHhccHHHHHHHHHHhcCCCCCccEEEEC-----------CCch---hHHHHHHHcCCceEEEccc
Q 009851 84 KCLQVMPGKLEELIEEINSREDEKIDCFIAD-----------GNIG---WSMEIAKKMNVRGAVFWPS 137 (524)
Q Consensus 84 ~~~~~~~~~~~~ll~~l~~~~~~~~D~vI~D-----------~~~~---~~~~~A~~lgiP~i~~~~~ 137 (524)
. -+..+ . .+||+||+. ..++ +++.-|..+|||.|.++..
T Consensus 76 l-----------al~~l-~---~~PDLVvSGIN~G~Nlg~d~v~ySGTVgAA~Ea~~~GiPaIA~S~~ 128 (280)
T 1l5x_A 76 L-----------ATFGL-G---RKYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSAY 128 (280)
T ss_dssp H-----------HHHHH-T---SCCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEEC
T ss_pred H-----------HHhcC-C---CCCCEEEECCccCCcCCccccccchhHHHHHHHHHcCCCeEEEEcc
Confidence 2 22223 2 689999963 2222 2344467789999999763
No 86
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=69.79 E-value=33 Score=31.25 Aligned_cols=119 Identities=13% Similarity=0.149 Sum_probs=64.3
Q ss_pred CEEEEEc-CC-CccCHHHHHHHHHHHHhCCCEEEEEeC---C-----cChhhHHHhhhcCCCCCCCeEEEecCCCCCCCC
Q 009851 4 PRVLVMP-AP-AQGHVIPLLEFSQCLAKHGFRVTFVNT---D-----YNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWE 73 (524)
Q Consensus 4 ~~il~~~-~~-~~GH~~p~l~LA~~L~~rGH~Vt~~~~---~-----~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~ 73 (524)
++.+|++ .. ..|-..-...|++.|.++|++|.++=+ . .....+++... .......+.+.....+
T Consensus 26 m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fKPv~~g~~~~~~D~~~~~~~~g----~~~~~~~~~~~~p~sP-- 99 (251)
T 3fgn_A 26 MTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCKPVQTGTARGDDDLAEVGRLAG----VTQLAGLARYPQPMAP-- 99 (251)
T ss_dssp CEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEEEEECCGGGTCCHHHHHHHHHC----CCEEEEEEECSSSSCH--
T ss_pred CCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEeeeecCCCCCCHHHHHHHHHcC----CCCCCCCeeECCCCCh--
Confidence 4555444 33 448889999999999999999999853 1 11222222210 0001122222211111
Q ss_pred CcccHHHHHHHHHH---hccHHHHHHHHHHhcCCCCCccEEEECCCc----------hhHHHHHHHcCCceEEEccch
Q 009851 74 DRNDLGKLIEKCLQ---VMPGKLEELIEEINSREDEKIDCFIADGNI----------GWSMEIAKKMNVRGAVFWPSS 138 (524)
Q Consensus 74 ~~~~~~~~~~~~~~---~~~~~~~~ll~~l~~~~~~~~D~vI~D~~~----------~~~~~~A~~lgiP~i~~~~~~ 138 (524)
... ..+.. ...+.+.+.++++. .++|++|+|... .....+|+.++.|++.+....
T Consensus 100 ---~~a---a~~~~~~~~~~~~i~~~~~~l~----~~~D~vlIEGagGl~~pl~~~~~~~adla~~l~~pVILV~~~~ 167 (251)
T 3fgn_A 100 ---AAA---AEHAGMALPARDQIVRLIADLD----RPGRLTLVEGAGGLLVELAEPGVTLRDVAVDVAAAALVVVTAD 167 (251)
T ss_dssp ---HHH---HHHTTCCCCCHHHHHHHHHTTC----CTTCEEEEECSSSTTCEEETTTEEHHHHHHHTTCEEEEEECSS
T ss_pred ---HHH---HHHcCCCCCCHHHHHHHHHHHH----hcCCEEEEECCCCCcCCcCcccchHHHHHHHcCCCEEEEEcCC
Confidence 111 11111 11223444444432 578999998731 245789999999999887543
No 87
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=67.85 E-value=33 Score=28.94 Aligned_cols=33 Identities=21% Similarity=0.304 Sum_probs=18.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEE
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFV 37 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~ 37 (524)
|++.+|+++- .|-.-...|.+.|.+.|++|..+
T Consensus 5 m~~~~iLivd----d~~~~~~~l~~~L~~~g~~v~~~ 37 (184)
T 3rqi_A 5 MSDKNFLVID----DNEVFAGTLARGLERRGYAVRQA 37 (184)
T ss_dssp --CCEEEEEC----SCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCeEEEEc----CCHHHHHHHHHHHHHCCCEEEEe
Confidence 4455666654 45555556666666667766443
No 88
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=67.53 E-value=5.3 Score=35.36 Aligned_cols=43 Identities=12% Similarity=-0.029 Sum_probs=31.6
Q ss_pred CCCEEEEEcCCCccCHHH-HHHHHHHHHhCCCEEEEEeCCcChhh
Q 009851 2 SRPRVLVMPAPAQGHVIP-LLEFSQCLAKHGFRVTFVNTDYNHKR 45 (524)
Q Consensus 2 ~~~~il~~~~~~~GH~~p-~l~LA~~L~~rGH~Vt~~~~~~~~~~ 45 (524)
+.+||++--.|+ +..+- ...+.+.|.++|++|.++.++.....
T Consensus 4 ~~k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~A~~v 47 (207)
T 3mcu_A 4 KGKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYTVQST 47 (207)
T ss_dssp TTCEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC-----
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehHHHHH
Confidence 467888777776 45665 78999999999999999999876533
No 89
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=67.02 E-value=30 Score=32.79 Aligned_cols=36 Identities=14% Similarity=0.082 Sum_probs=25.7
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
|+++||+|+-.+. ..+...++|.++||+|..+.+..
T Consensus 5 ~~~mrivf~Gt~~-----fa~~~L~~L~~~~~~v~~Vvt~p 40 (318)
T 3q0i_A 5 SQSLRIVFAGTPD-----FAARHLAALLSSEHEIIAVYTQP 40 (318)
T ss_dssp --CCEEEEECCSH-----HHHHHHHHHHTSSSEEEEEECCC
T ss_pred ccCCEEEEEecCH-----HHHHHHHHHHHCCCcEEEEEcCC
Confidence 5678999997653 33456688889999988777753
No 90
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=66.70 E-value=57 Score=27.39 Aligned_cols=144 Identities=14% Similarity=0.109 Sum_probs=78.9
Q ss_pred ceEEEeecCCCCCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeeEEeccChhhhhcCCCcceE
Q 009851 310 SVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACF 389 (524)
Q Consensus 310 ~vV~vs~GS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~vpq~~lL~~~~v~~~ 389 (524)
|.|-|-+||.+ +....++..+.++..+..+-..+..- ...|+.+. +++.+ +....++.|
T Consensus 6 p~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~Sa------HRtp~~l~----------~~~~~---~~~~g~~Vi 64 (166)
T 3oow_A 6 VQVGVIMGSKS--DWSTMKECCDILDNLGIGYECEVVSA------HRTPDKMF----------DYAET---AKERGLKVI 64 (166)
T ss_dssp EEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCT------TTCHHHHH----------HHHHH---TTTTTCCEE
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcC------cCCHHHHH----------HHHHH---HHhCCCcEE
Confidence 35667788754 66778888888988888665554332 33444432 11111 111223448
Q ss_pred EecCChh----hHHHHHHcCCceeccCcccch------hhhHHhhccccceeeEE-ecCCCCCCCHHHHHHHHHHHhcCH
Q 009851 390 LSHCGWN----STMEGVSNGIPFLCWPYFGDQ------FLNERYICDFWKVGLKF-DRDEGGIITREEIKNKVDQVLGNQ 458 (524)
Q Consensus 390 ItHgG~g----s~~Eal~~GvP~v~~P~~~DQ------~~na~rv~~~lG~G~~~-~~~~~~~~t~~~l~~ai~~~l~~~ 458 (524)
|.=.|.. ++..+ ..-+|+|.+|...-. ..-.-.+.. |+++.. ..++..-.++.-+...|- -+.|+
T Consensus 65 Ia~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~--gvpVatV~I~~ag~~nAa~lAa~Il-~~~d~ 140 (166)
T 3oow_A 65 IAGAGGAAHLPGMVAA-KTTLPVLGVPVKSSTLNGQDSLLSIVQMPA--GIPVATFAIGMAGAKNAALFAASIL-QHTDI 140 (166)
T ss_dssp EEEECSSCCHHHHHHH-TCSSCEEEEECCCTTTTTHHHHHHHHTCCT--TSCCEECCSTHHHHHHHHHHHHHHH-GGGCH
T ss_pred EEECCcchhhHHHHHh-ccCCCEEEeecCcCCCCCHHHHHHHhcCCC--CCceEEEecCCccchHHHHHHHHHH-cCCCH
Confidence 8766643 33333 346899999985321 222223443 555433 111000123344444443 34689
Q ss_pred HHHHHHHHHHHHHHhhhhcC
Q 009851 459 DFKARALELKEKAMSSVREG 478 (524)
Q Consensus 459 ~~r~~a~~l~~~~~~~~~~~ 478 (524)
.++++.+..++..++.+.+.
T Consensus 141 ~l~~kl~~~r~~~~~~v~~~ 160 (166)
T 3oow_A 141 NIAKALAEFRAEQTRFVLEN 160 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 99999999999888765443
No 91
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=66.50 E-value=41 Score=30.84 Aligned_cols=40 Identities=20% Similarity=0.395 Sum_probs=31.6
Q ss_pred CCEEEEEc--CCCccCHHHHHHHHHHHHhCCCEEEEEeCCcC
Q 009851 3 RPRVLVMP--APAQGHVIPLLEFSQCLAKHGFRVTFVNTDYN 42 (524)
Q Consensus 3 ~~~il~~~--~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~ 42 (524)
+.|+++++ -|+.|-..-...||..|++.|.+|.++-.+..
T Consensus 81 ~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~~ 122 (271)
T 3bfv_A 81 AVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDMR 122 (271)
T ss_dssp CCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 34566444 46779999999999999999999999977643
No 92
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=66.34 E-value=6.5 Score=34.84 Aligned_cols=44 Identities=18% Similarity=0.298 Sum_probs=36.0
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcChhhHH
Q 009851 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVV 47 (524)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~i~ 47 (524)
++.||++...|+.+-.. ...|.+.|.++| +|.++.++.....+.
T Consensus 18 ~~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~fv~ 61 (209)
T 1mvl_A 18 RKPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHFLD 61 (209)
T ss_dssp -CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGTCC
T ss_pred CCCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHhcC
Confidence 35789988888887665 899999999999 999999987765553
No 93
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=66.29 E-value=24 Score=35.73 Aligned_cols=107 Identities=13% Similarity=0.088 Sum_probs=64.5
Q ss_pred eeE-EeccChh---hhhcCCCcceEEe---cCChh-hHHHHHHcCC-----ceeccCcccchhhhHHhhccccceeeEEe
Q 009851 369 GQM-ISWAPQL---RVLNHPSIACFLS---HCGWN-STMEGVSNGI-----PFLCWPYFGDQFLNERYICDFWKVGLKFD 435 (524)
Q Consensus 369 ~~v-~~~vpq~---~lL~~~~v~~~It---HgG~g-s~~Eal~~Gv-----P~v~~P~~~DQ~~na~rv~~~lG~G~~~~ 435 (524)
+.+ .+.+|+. +++..+++ ||. .=|+| ++.||+++|+ |+|+--+.+ .+..+ .-|+.++
T Consensus 333 v~~~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G----~~~~l----~~g~lv~ 402 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG----AANEL----TSALIVN 402 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBG----GGGTC----TTSEEEC
T ss_pred EEEeCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCC----CHHHh----CCeEEEC
Confidence 554 4788877 46666776 554 23554 8899999998 666544332 22222 2356665
Q ss_pred cCCCCCCCHHHHHHHHHHHhcCH-H-HHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHH
Q 009851 436 RDEGGIITREEIKNKVDQVLGNQ-D-FKARALELKEKAMSSVREGGSSYKTFQNFLQWTMNA 495 (524)
Q Consensus 436 ~~~~~~~t~~~l~~ai~~~l~~~-~-~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~i~~~ 495 (524)
+ .+.++++++|.++|+++ + -+++.++..+.+++ - +...-.+.+++.++..
T Consensus 403 p-----~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~----~-s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 403 P-----YDRDEVAAALDRALTMSLAERISRHAEMLDVIVK----N-DINHWQECFISDLKQI 454 (482)
T ss_dssp T-----TCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH----T-CHHHHHHHHHHHHHHS
T ss_pred C-----CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh----C-CHHHHHHHHHHHHHhc
Confidence 4 57999999999999853 3 34444444444443 1 4444555555555443
No 94
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=66.27 E-value=43 Score=25.87 Aligned_cols=31 Identities=6% Similarity=0.127 Sum_probs=20.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEE
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFV 37 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~ 37 (524)
+.||+++- .|-.-...+.+.|.+.|++|+.+
T Consensus 7 ~~~ilivd----d~~~~~~~l~~~L~~~g~~v~~~ 37 (130)
T 3eod_A 7 GKQILIVE----DEQVFRSLLDSWFSSLGATTVLA 37 (130)
T ss_dssp TCEEEEEC----SCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCeEEEEe----CCHHHHHHHHHHHHhCCceEEEe
Confidence 45677665 45555666677777778777653
No 95
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=66.05 E-value=8.5 Score=33.50 Aligned_cols=44 Identities=20% Similarity=0.216 Sum_probs=36.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcChhhHHH
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVE 48 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~i~~ 48 (524)
.||++.-.|+.|- +=...+.++|.++|++|.++.++.....+..
T Consensus 2 k~IllgvTGs~aa-~k~~~l~~~L~~~g~~V~vv~T~~A~~~i~~ 45 (189)
T 2ejb_A 2 QKIALCITGASGV-IYGIKLLQVLEELDFSVDLVISRNAKVVLKE 45 (189)
T ss_dssp CEEEEEECSSTTH-HHHHHHHHHHHHTTCEEEEEECHHHHHHHHH
T ss_pred CEEEEEEECHHHH-HHHHHHHHHHHHCCCEEEEEEChhHHHHhhH
Confidence 5788888788774 4679999999999999999999887776654
No 96
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=63.17 E-value=31 Score=34.96 Aligned_cols=110 Identities=10% Similarity=-0.033 Sum_probs=70.4
Q ss_pred CeeEEeccChh---hhhcCCCcceEEe---cCChhh-HHHHHHcC---CceeccCcccchhhhHHhhccccceeeEEecC
Q 009851 368 RGQMISWAPQL---RVLNHPSIACFLS---HCGWNS-TMEGVSNG---IPFLCWPYFGDQFLNERYICDFWKVGLKFDRD 437 (524)
Q Consensus 368 n~~v~~~vpq~---~lL~~~~v~~~It---HgG~gs-~~Eal~~G---vP~v~~P~~~DQ~~na~rv~~~lG~G~~~~~~ 437 (524)
.|.+.+.+|+. .++..+++ |+. .=|+|- ..|++++| .|+|+--+.+ .+..+. .-|+.+++
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~~l~---~~allVnP- 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAEVLG---EYCRSVNP- 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THHHHG---GGSEEECT-
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHHHhC---CCEEEECC-
Confidence 57777888876 45656666 443 458775 58999986 5555433332 233231 24677865
Q ss_pred CCCCCCHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHHh
Q 009851 438 EGGIITREEIKNKVDQVLGNQ--DFKARALELKEKAMSSVREGGSSYKTFQNFLQWTMNAL 496 (524)
Q Consensus 438 ~~~~~t~~~l~~ai~~~l~~~--~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~i~~~~ 496 (524)
.+.++++++|.++|+++ +-+++.+++.+.+++. ....=.+.+++.+....
T Consensus 423 ----~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~V~~~-----d~~~W~~~fl~~L~~~~ 474 (496)
T 3t5t_A 423 ----FDLVEQAEAISAALAAGPRQRAEAAARRRDAARPW-----TLEAWVQAQLDGLAADH 474 (496)
T ss_dssp ----TBHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTC-----BHHHHHHHHHHHHHHHH
T ss_pred ----CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHhhcc
Confidence 68999999999999864 4566666666666542 34555666666666553
No 97
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=62.97 E-value=14 Score=34.90 Aligned_cols=35 Identities=20% Similarity=0.325 Sum_probs=26.7
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC-C-CEEEEEeCCc
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKH-G-FRVTFVNTDY 41 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~r-G-H~Vt~~~~~~ 41 (524)
|+++||+++..+.. ..+++.|.+. | ++|.++....
T Consensus 2 m~~~~Ili~g~g~~------~~l~~~l~~~~~~~~v~~~d~~~ 38 (331)
T 2pn1_A 2 MQKPHLLITSAGRR------AKLVEYFVKEFKTGRVSTADCSP 38 (331)
T ss_dssp TTCCEEEEESCTTC------HHHHHHHHHHCCSSEEEEEESCT
T ss_pred CccceEEEecCCch------HHHHHHHHHhcCCCEEEEEeCCC
Confidence 88899999865543 4799999886 7 8888876543
No 98
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=62.89 E-value=39 Score=26.98 Aligned_cols=32 Identities=19% Similarity=0.249 Sum_probs=19.7
Q ss_pred CCccEEEECCCch--hHHHHHHHc---------CCceEEEccc
Q 009851 106 EKIDCFIADGNIG--WSMEIAKKM---------NVRGAVFWPS 137 (524)
Q Consensus 106 ~~~D~vI~D~~~~--~~~~~A~~l---------giP~i~~~~~ 137 (524)
.+||+||.|...+ .+..+.+.+ .+|.+.++..
T Consensus 57 ~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~ 99 (143)
T 3m6m_D 57 EDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSAD 99 (143)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCC
Confidence 5788888887655 355555443 2677666543
No 99
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=62.75 E-value=54 Score=25.72 Aligned_cols=34 Identities=9% Similarity=0.063 Sum_probs=21.8
Q ss_pred CCccEEEECCCch--hHHHHHHH-------cCCceEEEccchH
Q 009851 106 EKIDCFIADGNIG--WSMEIAKK-------MNVRGAVFWPSSA 139 (524)
Q Consensus 106 ~~~D~vI~D~~~~--~~~~~A~~-------lgiP~i~~~~~~~ 139 (524)
.+||+||.|...+ .+..+.+. -++|.+.+.....
T Consensus 49 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~ 91 (140)
T 3grc_A 49 RPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVVVSANAR 91 (140)
T ss_dssp SCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEEECTTHH
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEEEecCCC
Confidence 6789999997655 34444433 2567777765543
No 100
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=62.27 E-value=19 Score=35.62 Aligned_cols=97 Identities=13% Similarity=0.122 Sum_probs=51.1
Q ss_pred CC--CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcChhhHHHhhhcCCCCCCCeEEEecCCCCCCCCCcccH
Q 009851 1 MS--RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDL 78 (524)
Q Consensus 1 m~--~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 78 (524)
|+ .+||+++..+ ..+ . -+.++..+.|++|+++........... ..--+++.++... +.
T Consensus 1 M~~~~k~l~Il~~~-~~~-~---~i~~aa~~lG~~vv~v~~~~~~~~~~~--------~~~d~~~~~~~~~-------d~ 60 (425)
T 3vot_A 1 MTKRNKNLAIICQN-KHL-P---FIFEEAERLGLKVTFFYNSAEDFPGNL--------PAVERCVPLPLFE-------DE 60 (425)
T ss_dssp -CCCCCEEEEECCC-TTC-C---HHHHHHHHTTCEEEEEEETTSCCCCSC--------TTEEEEEEECTTT-------CH
T ss_pred CCCCCcEEEEECCC-hhH-H---HHHHHHHHCCCEEEEEECCCcccccCH--------hhccEEEecCCCC-------CH
Confidence 65 3577777643 322 2 256777788999999876543211000 0012344443211 11
Q ss_pred HHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEE--CCCchhHHHHHHHcCCce
Q 009851 79 GKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIA--DGNIGWSMEIAKKMNVRG 131 (524)
Q Consensus 79 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~D~vI~--D~~~~~~~~~A~~lgiP~ 131 (524)
...+ ..+.++.+. .++|.|+. |.....+..+++.+|+|.
T Consensus 61 ~~~~--------~~~~~~~~~------~~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 61 EAAM--------DVVRQTFVE------FPFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp HHHH--------HHHHHHHHH------SCCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred HHHH--------HHHHHhhhh------cCCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 1111 123344444 78999884 434445677899999994
No 101
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=62.09 E-value=22 Score=31.82 Aligned_cols=36 Identities=3% Similarity=0.064 Sum_probs=28.0
Q ss_pred CCEEEEEc-C-CCccCHHHHHHHHHHHHhCCCEEEEEe
Q 009851 3 RPRVLVMP-A-PAQGHVIPLLEFSQCLAKHGFRVTFVN 38 (524)
Q Consensus 3 ~~~il~~~-~-~~~GH~~p~l~LA~~L~~rGH~Vt~~~ 38 (524)
++|.+|++ . .+.|-..-...|++.|+++|++|.++=
T Consensus 3 ~mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~K 40 (228)
T 3of5_A 3 AMKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLK 40 (228)
T ss_dssp TCEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEec
Confidence 34445444 3 355899999999999999999999985
No 102
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=61.83 E-value=52 Score=25.25 Aligned_cols=33 Identities=18% Similarity=0.170 Sum_probs=19.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEE
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFV 37 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~ 37 (524)
|++.+|+++- .|-.-...+.+.|.+.|++|..+
T Consensus 1 m~~~~ilivd----d~~~~~~~l~~~l~~~~~~v~~~ 33 (126)
T 1dbw_A 1 MQDYTVHIVD----DEEPVRKSLAFMLTMNGFAVKMH 33 (126)
T ss_dssp CCCCEEEEEE----SSHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCEEEEEc----CCHHHHHHHHHHHHhCCcEEEEe
Confidence 5566666654 44444555666666677776543
No 103
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=60.71 E-value=34 Score=32.77 Aligned_cols=99 Identities=9% Similarity=0.134 Sum_probs=57.5
Q ss_pred EEEEEcCCCcc--C--HHHHHHHHHHHHhCCCEEEEEeCCcChhhHHHhhhcCCCCCCCeEEEecCCCCCCCCCcccHHH
Q 009851 5 RVLVMPAPAQG--H--VIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGK 80 (524)
Q Consensus 5 ~il~~~~~~~G--H--~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 80 (524)
-|++.|..+.. . ..-+.+|++.|.++|++|.++.++...+..++..... +-..+.+..
T Consensus 187 ~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e~~~~~~i~~~~-----~~~~~~l~g------------- 248 (349)
T 3tov_A 187 LIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMDLEMVQPVVEQM-----ETKPIVATG------------- 248 (349)
T ss_dssp EEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTTHHHHHHHHHTC-----SSCCEECTT-------------
T ss_pred EEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcchHHHHHHHHHhc-----ccccEEeeC-------------
Confidence 45566655432 1 3458999999999999998877766555544331100 000111110
Q ss_pred HHHHHHHhccHHHHHHHHHHhcCCCCCccEEEECCCchhHHHHHHHcCCceEEEccc
Q 009851 81 LIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPS 137 (524)
Q Consensus 81 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~i~~~~~ 137 (524)
+..+.++...+ .+-|++|+.- .+..++|..+|+|.|.++..
T Consensus 249 ---------~~sl~e~~ali-----~~a~~~i~~D--sG~~HlAaa~g~P~v~lfg~ 289 (349)
T 3tov_A 249 ---------KFQLGPLAAAM-----NRCNLLITND--SGPMHVGISQGVPIVALYGP 289 (349)
T ss_dssp ---------CCCHHHHHHHH-----HTCSEEEEES--SHHHHHHHTTTCCEEEECSS
T ss_pred ---------CCCHHHHHHHH-----HhCCEEEECC--CCHHHHHHhcCCCEEEEECC
Confidence 11133333333 2468888742 45677789999999997643
No 104
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=60.01 E-value=61 Score=25.45 Aligned_cols=30 Identities=33% Similarity=0.602 Sum_probs=17.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEE
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTF 36 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~ 36 (524)
+.+|+++- .+-.-...+.+.|.+.|++|..
T Consensus 4 ~~~iLivd----d~~~~~~~l~~~L~~~g~~v~~ 33 (142)
T 2qxy_A 4 TPTVMVVD----ESRITFLAVKNALEKDGFNVIW 33 (142)
T ss_dssp CCEEEEEC----SCHHHHHHHHHHHGGGTCEEEE
T ss_pred CCeEEEEe----CCHHHHHHHHHHHHhCCCEEEE
Confidence 34666654 4445555566666666776664
No 105
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=59.62 E-value=53 Score=30.64 Aligned_cols=38 Identities=18% Similarity=0.441 Sum_probs=30.7
Q ss_pred CEEEEEc--CCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 4 PRVLVMP--APAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 4 ~~il~~~--~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
.|+++++ -|+.|-..-...||..|+++|.+|.++-.+.
T Consensus 104 ~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~ 143 (299)
T 3cio_A 104 NNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADL 143 (299)
T ss_dssp CCEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CeEEEEECCCCCCChHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 4555444 3577999999999999999999999997664
No 106
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=59.57 E-value=62 Score=25.38 Aligned_cols=32 Identities=25% Similarity=0.298 Sum_probs=18.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEE
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTF 36 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~ 36 (524)
|+..+|+++- .|-.-...+.+.|.+.|++|+.
T Consensus 1 m~~~~ILivd----d~~~~~~~l~~~L~~~g~~v~~ 32 (138)
T 3c3m_A 1 MSLYTILVVD----DSPMIVDVFVTMLERGGYRPIT 32 (138)
T ss_dssp -CCCEEEEEC----SCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCcceEEEEe----CCHHHHHHHHHHHHHcCceEEE
Confidence 5555666654 3444455566666667776653
No 107
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=59.34 E-value=70 Score=28.22 Aligned_cols=103 Identities=11% Similarity=0.124 Sum_probs=55.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCC--EEEEEeCCc-Ch---hhHHHhhhcCCCCCCCeEEEecCCCCCCCCCccc
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGF--RVTFVNTDY-NH---KRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRND 77 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH--~Vt~~~~~~-~~---~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 77 (524)
+||+|+..|+.+ -+..+.++|.+.+| +|..+.+.. .. +..++. |+.+..++...- .+
T Consensus 2 ~rI~vl~SG~g~---~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~---------gIp~~~~~~~~~-----~~ 64 (216)
T 2ywr_A 2 LKIGVLVSGRGS---NLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKH---------NVECKVIQRKEF-----PS 64 (216)
T ss_dssp EEEEEEECSCCH---HHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHH---------TCCEEECCGGGS-----SS
T ss_pred CEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHc---------CCCEEEeCcccc-----cc
Confidence 588888655543 46677788888888 766555443 22 223332 666665442100 00
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEECCCch-hHHHHHHHcCCceEEEccc
Q 009851 78 LGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG-WSMEIAKKMNVRGAVFWPS 137 (524)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~D~vI~D~~~~-~~~~~A~~lgiP~i~~~~~ 137 (524)
. ....+.+.+.++. .++|++|+-.+.. -...+-+...-.++-+.++
T Consensus 65 -r-------~~~~~~~~~~l~~------~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 111 (216)
T 2ywr_A 65 -K-------KEFEERMALELKK------KGVELVVLAGFMRILSHNFLKYFPNKVINIHPS 111 (216)
T ss_dssp -H-------HHHHHHHHHHHHH------TTCCEEEESSCCSCCCHHHHTTSTTCEEEEESS
T ss_pred -h-------hhhhHHHHHHHHh------cCCCEEEEeCchhhCCHHHHhhccCCeEEEcCC
Confidence 0 1111223334444 7899999876533 3444445555566666554
No 108
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=59.24 E-value=8.8 Score=33.62 Aligned_cols=43 Identities=14% Similarity=0.198 Sum_probs=35.0
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhC-CCEEEEEeCCcChhhHHH
Q 009851 5 RVLVMPAPAQGHVIPLLEFSQCLAKH-GFRVTFVNTDYNHKRVVE 48 (524)
Q Consensus 5 ~il~~~~~~~GH~~p~l~LA~~L~~r-GH~Vt~~~~~~~~~~i~~ 48 (524)
||++--.|+.|-.. ...|.+.|.++ |++|.++.++.....+..
T Consensus 2 ~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~~fi~~ 45 (197)
T 1sbz_A 2 KLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAKTTIEL 45 (197)
T ss_dssp EEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHHHHHHH
T ss_pred EEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHHHHhHH
Confidence 67777777766555 89999999999 999999999877766653
No 109
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=58.89 E-value=32 Score=28.77 Aligned_cols=138 Identities=9% Similarity=0.054 Sum_probs=76.8
Q ss_pred eEEEeecCCCCCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeeEEeccChhhhhcCCCcceEE
Q 009851 311 VVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFL 390 (524)
Q Consensus 311 vV~vs~GS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~vpq~~lL~~~~v~~~I 390 (524)
.|-|-+||.+ +....++..+.++..+..+-..+..- ...|+.+.+ ++.+.. ....++.||
T Consensus 4 ~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~sa------HR~p~~~~~----------~~~~a~--~~~~~~ViI 63 (159)
T 3rg8_A 4 LVIILMGSSS--DMGHAEKIASELKTFGIEYAIRIGSA------HKTAEHVVS----------MLKEYE--ALDRPKLYI 63 (159)
T ss_dssp EEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCT------TTCHHHHHH----------HHHHHH--TSCSCEEEE
T ss_pred eEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEcc------cCCHHHHHH----------HHHHhh--hcCCCcEEE
Confidence 5666678654 66778888888888898766555332 344544321 111111 101234477
Q ss_pred ecCChh----hHHHHHHcCCceeccCcccch---h-hhHHhhccccceeeEEecCCCCCCCHHHHHHHHHHHhcCHHHHH
Q 009851 391 SHCGWN----STMEGVSNGIPFLCWPYFGDQ---F-LNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDFKA 462 (524)
Q Consensus 391 tHgG~g----s~~Eal~~GvP~v~~P~~~DQ---~-~na~rv~~~lG~G~~~~~~~~~~~t~~~l~~ai~~~l~~~~~r~ 462 (524)
.=.|.. ++..+ ..-+|+|.+|...-. . .++..=.-. |+.+.-- +.-.++.-+...|-. +.|+.+++
T Consensus 64 a~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~dLlS~vqmp~-GvpVatv---~~~~nAa~lA~~Il~-~~d~~l~~ 137 (159)
T 3rg8_A 64 TIAGRSNALSGFVDG-FVKGATIACPPPSDSFAGADIYSSLRMPS-GISPALV---LEPKNAALLAARIFS-LYDKEIAD 137 (159)
T ss_dssp EECCSSCCHHHHHHH-HSSSCEEECCCCCCGGGGTHHHHHHCCCT-TCCCEEC---CSHHHHHHHHHHHHT-TTCHHHHH
T ss_pred EECCchhhhHHHHHh-ccCCCEEEeeCCCCCCCCccHHHHHhCCC-CCceEEe---cCchHHHHHHHHHHh-CCCHHHHH
Confidence 776643 44444 366999999965311 1 222211111 5553321 133455555555533 46889999
Q ss_pred HHHHHHHHHHhh
Q 009851 463 RALELKEKAMSS 474 (524)
Q Consensus 463 ~a~~l~~~~~~~ 474 (524)
+.+..++..++.
T Consensus 138 kl~~~r~~~~~~ 149 (159)
T 3rg8_A 138 SVKSYMESNAQK 149 (159)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999988877764
No 110
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=58.65 E-value=62 Score=25.11 Aligned_cols=32 Identities=28% Similarity=0.353 Sum_probs=17.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEE
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTF 36 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~ 36 (524)
|++.+|+++- .|-.-...+.+.|.+.|++|+.
T Consensus 1 m~~~~Ilivd----d~~~~~~~l~~~L~~~g~~v~~ 32 (132)
T 3crn_A 1 MSLKRILIVD----DDTAILDSTKQILEFEGYEVEI 32 (132)
T ss_dssp --CCEEEEEC----SCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCccEEEEEe----CCHHHHHHHHHHHHHCCceEEE
Confidence 5556666654 3444455566666667777653
No 111
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=58.60 E-value=51 Score=30.31 Aligned_cols=36 Identities=19% Similarity=0.320 Sum_probs=26.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
+.|+++++.++.| =-..+|++|+++|++|.++.-..
T Consensus 8 ~~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r~~ 43 (285)
T 3sc4_A 8 RGKTMFISGGSRG---IGLAIAKRVAADGANVALVAKSA 43 (285)
T ss_dssp TTCEEEEESCSSH---HHHHHHHHHHTTTCEEEEEESCC
T ss_pred CCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEECCh
Confidence 3467777766553 34689999999999999887653
No 112
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=58.48 E-value=4.2 Score=35.66 Aligned_cols=43 Identities=9% Similarity=0.033 Sum_probs=34.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcChhhH
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRV 46 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~i 46 (524)
..||++...|+.+=.. ...+.+.|.++|++|.++.++.....+
T Consensus 8 ~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~A~~fi 50 (194)
T 1p3y_1 8 DKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKTAEDLI 50 (194)
T ss_dssp GCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHHHHHHS
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchhHHHHH
Confidence 4688877777766554 789999999999999999997655544
No 113
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=58.43 E-value=71 Score=25.69 Aligned_cols=31 Identities=13% Similarity=0.289 Sum_probs=18.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEE
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFV 37 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~ 37 (524)
+.+|+++- .+-.-...|.+.|.+.|++|..+
T Consensus 7 ~~~ILivd----d~~~~~~~l~~~L~~~g~~v~~~ 37 (154)
T 3gt7_A 7 AGEILIVE----DSPTQAEHLKHILEETGYQTEHV 37 (154)
T ss_dssp CCEEEEEC----SCHHHHHHHHHHHHTTTCEEEEE
T ss_pred CCcEEEEe----CCHHHHHHHHHHHHHCCCEEEEe
Confidence 35666654 45555566666676677776554
No 114
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=58.43 E-value=25 Score=31.95 Aligned_cols=36 Identities=14% Similarity=0.266 Sum_probs=26.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~ 39 (524)
|.+-|.++++.++.| --..+|++|+++|++|.+...
T Consensus 1 M~~~k~vlVTGas~g---IG~aia~~l~~~G~~vv~~~~ 36 (258)
T 3oid_A 1 MEQNKCALVTGSSRG---VGKAAAIRLAENGYNIVINYA 36 (258)
T ss_dssp --CCCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEecCCch---HHHHHHHHHHHCCCEEEEEcC
Confidence 666678888866542 346899999999999998644
No 115
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=58.08 E-value=7.5 Score=33.57 Aligned_cols=45 Identities=11% Similarity=0.123 Sum_probs=33.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcChhhHH
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVV 47 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~i~ 47 (524)
|.+ ||++.-.|+.+=. =...+.+.|.++|++|.++.++.....+.
T Consensus 1 ~~k-~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~fi~ 45 (181)
T 1g63_A 1 MYG-KLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSKNFIN 45 (181)
T ss_dssp CCC-CEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGGGTSC
T ss_pred CCC-EEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHHHHH
Confidence 433 5776666665544 67899999999999999999987665553
No 116
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=57.68 E-value=63 Score=24.87 Aligned_cols=32 Identities=31% Similarity=0.491 Sum_probs=20.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEE
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTF 36 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~ 36 (524)
|++.+|+++- .+-.-...+.+.|.+.|++|..
T Consensus 3 m~~~~ilivd----d~~~~~~~l~~~L~~~g~~v~~ 34 (132)
T 2rdm_A 3 LEAVTILLAD----DEAILLLDFESTLTDAGFLVTA 34 (132)
T ss_dssp CSSCEEEEEC----SSHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCceEEEEc----CcHHHHHHHHHHHHHcCCEEEE
Confidence 3456777664 4455555667777777777664
No 117
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=57.62 E-value=43 Score=31.04 Aligned_cols=39 Identities=21% Similarity=0.402 Sum_probs=31.1
Q ss_pred CEEEEEc--CCCccCHHHHHHHHHHHHhCCCEEEEEeCCcC
Q 009851 4 PRVLVMP--APAQGHVIPLLEFSQCLAKHGFRVTFVNTDYN 42 (524)
Q Consensus 4 ~~il~~~--~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~ 42 (524)
.|+++++ -|+.|-..-...||..|++.|.+|.++-.+..
T Consensus 92 ~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~~ 132 (286)
T 3la6_A 92 NNVLMMTGVSPSIGMTFVCANLAAVISQTNKRVLLIDCDMR 132 (286)
T ss_dssp CCEEEEEESSSSSSHHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeccCC
Confidence 4555444 45779999999999999999999999977643
No 118
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=57.25 E-value=6.9 Score=34.61 Aligned_cols=45 Identities=20% Similarity=0.149 Sum_probs=33.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHh-CCCEEEEEeCCcChhhHH
Q 009851 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAK-HGFRVTFVNTDYNHKRVV 47 (524)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~LA~~L~~-rGH~Vt~~~~~~~~~~i~ 47 (524)
++.||++...|+.+=. -...|.+.|.+ +|++|.++.++.....+.
T Consensus 18 ~~k~IllgvTGsiaa~-k~~~lv~~L~~~~g~~V~vv~T~~A~~fi~ 63 (206)
T 1qzu_A 18 RKFHVLVGVTGSVAAL-KLPLLVSKLLDIPGLEVAVVTTERAKHFYS 63 (206)
T ss_dssp SSEEEEEEECSSGGGG-THHHHHHHHC---CEEEEEEECTGGGGSSC
T ss_pred CCCEEEEEEeChHHHH-HHHHHHHHHhcccCCEEEEEECHhHHHHhC
Confidence 3568887777776644 46999999999 899999999988766553
No 119
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=56.91 E-value=91 Score=29.27 Aligned_cols=102 Identities=15% Similarity=0.206 Sum_probs=54.3
Q ss_pred EEEEEcCCCcc---C--HHHHHHHHHHHHhCCCEEEEEeCCcChhhHHHhhhcCCCCCCCeEEEecCCCCCCCCCcccHH
Q 009851 5 RVLVMPAPAQG---H--VIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLG 79 (524)
Q Consensus 5 ~il~~~~~~~G---H--~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (524)
.|++.|....+ . ..-+.++++.|.++|++|.++.++...+..+...... ........+.+..
T Consensus 182 ~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~e~~~~~~i~~~~-~~~~~~~~~~l~g------------ 248 (348)
T 1psw_A 182 MIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKDHEAGNEILAAL-NTEQQAWCRNLAG------------ 248 (348)
T ss_dssp EEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGGHHHHHHHHTTS-CHHHHTTEEECTT------------
T ss_pred EEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChhhHHHHHHHHHhh-hhccccceEeccC------------
Confidence 45566644221 2 2378899999999999998876655443333221000 0000000111110
Q ss_pred HHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEECCCchhHHHHHHHcCCceEEEcc
Q 009851 80 KLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWP 136 (524)
Q Consensus 80 ~~~~~~~~~~~~~~~~ll~~l~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~i~~~~ 136 (524)
...+.++.+-+ ..-|++|+.- .+...+|..+|+|.|.++.
T Consensus 249 ----------~~sl~e~~ali-----~~a~l~I~~D--sg~~HlAaa~g~P~v~lfg 288 (348)
T 1psw_A 249 ----------ETQLDQAVILI-----AACKAIVTND--SGLMHVAAALNRPLVALYG 288 (348)
T ss_dssp ----------TSCHHHHHHHH-----HTSSEEEEES--SHHHHHHHHTTCCEEEEES
T ss_pred ----------cCCHHHHHHHH-----HhCCEEEecC--CHHHHHHHHcCCCEEEEEC
Confidence 01133333333 2468888753 4567778889999998763
No 120
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=56.65 E-value=43 Score=30.05 Aligned_cols=37 Identities=16% Similarity=0.284 Sum_probs=29.6
Q ss_pred EEE-EEc-CCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 5 RVL-VMP-APAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 5 ~il-~~~-~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
|++ |.. -|+.|-..-...||..|+++|++|.++=.+.
T Consensus 3 ~vi~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 3 RIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp EEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred eEEEEECCCCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 444 433 4566999999999999999999999987664
No 121
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=56.64 E-value=43 Score=29.50 Aligned_cols=105 Identities=14% Similarity=0.127 Sum_probs=56.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCC--CEEEEEeCCc-Ch---hhHHHhhhcCCCCCCCeEEEecCCC-CCCCC
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHG--FRVTFVNTDY-NH---KRVVESLQGKNYLGEQIHLVSIPDG-MEPWE 73 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rG--H~Vt~~~~~~-~~---~~i~~~~~~~~~~~~~i~~~~~~~~-~~~~~ 73 (524)
|++.||+++..+..+- +..|.+++.+.+ ++|..+.+.. .. +..++ .|+.+..++.. +..
T Consensus 5 m~~~ri~vl~SG~gsn---l~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~---------~gIp~~~~~~~~~~~-- 70 (209)
T 4ds3_A 5 MKRNRVVIFISGGGSN---MEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEA---------AGIATQVFKRKDFAS-- 70 (209)
T ss_dssp -CCEEEEEEESSCCHH---HHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHH---------TTCCEEECCGGGSSS--
T ss_pred CCCccEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHH---------cCCCEEEeCccccCC--
Confidence 7888999887666544 445556665543 7888777632 21 22333 36776665421 110
Q ss_pred CcccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEECCCch-hHHHHHHHcCCceEEEccc
Q 009851 74 DRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG-WSMEIAKKMNVRGAVFWPS 137 (524)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~D~vI~D~~~~-~~~~~A~~lgiP~i~~~~~ 137 (524)
. ....+.+.+.+++ .++|++|+-.+.. -...+-+...-.++-+.++
T Consensus 71 -----r-------~~~d~~~~~~l~~------~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 117 (209)
T 4ds3_A 71 -----K-------EAHEDAILAALDV------LKPDIICLAGYMRLLSGRFIAPYEGRILNIHPS 117 (209)
T ss_dssp -----H-------HHHHHHHHHHHHH------HCCSEEEESSCCSCCCHHHHGGGTTCEEEEESS
T ss_pred -----H-------HHHHHHHHHHHHh------cCCCEEEEeccccCcCHHHHhhccCCeEEECCc
Confidence 0 0111233344444 7899999776533 3344445555556665544
No 122
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=56.05 E-value=1.1e+02 Score=27.21 Aligned_cols=104 Identities=15% Similarity=0.119 Sum_probs=57.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCc-Ch---hhHHHhhhcCCCCCCCeEEEecCCCCCCCCCcc
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDY-NH---KRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRN 76 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~r--GH~Vt~~~~~~-~~---~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 76 (524)
++||+|+..++.+ -+..+.+.|.+. +++|..+.+.. .. +..++ .++.+..++...-.
T Consensus 22 ~~rI~~l~SG~g~---~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~---------~gIp~~~~~~~~~~----- 84 (229)
T 3auf_A 22 MIRIGVLISGSGT---NLQAILDGCREGRIPGRVAVVISDRADAYGLERARR---------AGVDALHMDPAAYP----- 84 (229)
T ss_dssp CEEEEEEESSCCH---HHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHH---------TTCEEEECCGGGSS-----
T ss_pred CcEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHH---------cCCCEEEECccccc-----
Confidence 3589988766543 366777888876 68876666542 22 22222 37877765421100
Q ss_pred cHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEECCCch-hHHHHHHHcCCceEEEccc
Q 009851 77 DLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG-WSMEIAKKMNVRGAVFWPS 137 (524)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~D~vI~D~~~~-~~~~~A~~lgiP~i~~~~~ 137 (524)
+ . ....+.+.+.++. .++|+||+-.+.. -...+-+...-.++-+.++
T Consensus 85 ~-r-------~~~~~~~~~~l~~------~~~Dliv~agy~~IL~~~~l~~~~~~~iNiHpS 132 (229)
T 3auf_A 85 S-R-------TAFDAALAERLQA------YGVDLVCLAGYMRLVRGPMLTAFPNRILNIHPS 132 (229)
T ss_dssp S-H-------HHHHHHHHHHHHH------TTCSEEEESSCCSCCCHHHHHHSTTCEEEEESS
T ss_pred c-h-------hhccHHHHHHHHh------cCCCEEEEcChhHhCCHHHHhhccCCEEEEccC
Confidence 0 0 0111223344444 7899999876633 3445556666666666554
No 123
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=55.78 E-value=9.8 Score=36.38 Aligned_cols=43 Identities=21% Similarity=0.182 Sum_probs=32.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcChhhHHH
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVE 48 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~i~~ 48 (524)
|+.+||+|+-.|..| ..+|..|++.||+|+++......+.+.+
T Consensus 1 M~~mkI~IiGaG~~G-----~~~a~~L~~~g~~V~~~~r~~~~~~~~~ 43 (335)
T 3ghy_A 1 MSLTRICIVGAGAVG-----GYLGARLALAGEAINVLARGATLQALQT 43 (335)
T ss_dssp -CCCCEEEESCCHHH-----HHHHHHHHHTTCCEEEECCHHHHHHHHH
T ss_pred CCCCEEEEECcCHHH-----HHHHHHHHHCCCEEEEEEChHHHHHHHH
Confidence 777899999887776 4679999999999999986433333433
No 124
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=55.73 E-value=41 Score=30.83 Aligned_cols=37 Identities=30% Similarity=0.369 Sum_probs=25.7
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
|.+.|+++++.++.| =-..+|++|+++|++|.++.-.
T Consensus 21 m~~~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 57 (279)
T 3sju_A 21 MSRPQTAFVTGVSSG---IGLAVARTLAARGIAVYGCARD 57 (279)
T ss_dssp ----CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred ccCCCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 444567888866553 3568999999999999887654
No 125
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=55.18 E-value=1e+02 Score=31.32 Aligned_cols=33 Identities=9% Similarity=0.040 Sum_probs=22.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
+|++++. .-.-.+.|++.|.+-|.+|..+....
T Consensus 365 KrvaI~g-----d~~~~~~la~fL~elGm~vv~v~~~~ 397 (523)
T 3u7q_B 365 KRFALWG-----DPDFVMGLVKFLLELGCEPVHILCHN 397 (523)
T ss_dssp CEEEEEC-----SHHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred CEEEEEC-----CchHHHHHHHHHHHcCCEEEEEEeCC
Confidence 5667662 33445678888888999888776543
No 126
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=54.96 E-value=60 Score=28.96 Aligned_cols=37 Identities=16% Similarity=0.246 Sum_probs=27.5
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
|-+.|.++++.++.| =-..+|++|+++|++|.++...
T Consensus 1 Ml~~k~~lVTGas~g---IG~~ia~~l~~~G~~V~~~~~~ 37 (246)
T 3osu_A 1 MKMTKSALVTGASRG---IGRSIALQLAEEGYNVAVNYAG 37 (246)
T ss_dssp CCCSCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeCC
Confidence 545567788865543 3468899999999999887653
No 127
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=54.78 E-value=96 Score=26.11 Aligned_cols=145 Identities=17% Similarity=0.128 Sum_probs=80.4
Q ss_pred CceEEEeecCCCCCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeeEEeccChhhhhcCCCcce
Q 009851 309 SSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIAC 388 (524)
Q Consensus 309 ~~vV~vs~GS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~vpq~~lL~~~~v~~ 388 (524)
+|.|-|-+||.+ +.+..++..+.|+..+..+-..+..- ...|+.+.+. +.+. ....++.
T Consensus 11 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa------HR~p~~l~~~----------~~~a---~~~g~~V 69 (170)
T 1xmp_A 11 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSA------HRTPDYMFEY----------AETA---RERGLKV 69 (170)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTSHHHHHHH----------HHHT---TTTTCCE
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEec------cCCHHHHHHH----------HHHH---HhCCCcE
Confidence 457778888754 67788888999998998866555332 3344443211 1110 0111333
Q ss_pred EEecCChh----hHHHHHHcCCceeccCcccc--hhhhHHh-hcc--ccceeeE-EecCCCCCCCHHHHHHHHHHHhcCH
Q 009851 389 FLSHCGWN----STMEGVSNGIPFLCWPYFGD--QFLNERY-ICD--FWKVGLK-FDRDEGGIITREEIKNKVDQVLGNQ 458 (524)
Q Consensus 389 ~ItHgG~g----s~~Eal~~GvP~v~~P~~~D--Q~~na~r-v~~--~lG~G~~-~~~~~~~~~t~~~l~~ai~~~l~~~ 458 (524)
||.=.|.. ++..++ .-+|+|.+|.... .-..+-. +.+ . |+.+. +..++..-.++.-+...|. .+.|+
T Consensus 70 iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlSivqmP~-GvpVatV~I~~a~~~nAallAaqIl-a~~d~ 146 (170)
T 1xmp_A 70 IIAGAGGAAHLPGMVAAK-TNLPVIGVPVQSKALNGLDSLLSIVQMPG-GVPVATVAIGKAGSTNAGLLAAQIL-GSFHD 146 (170)
T ss_dssp EEEEEESSCCHHHHHHTT-CCSCEEEEEECCTTTTTHHHHHHHHCCCT-TCCCEECCSSHHHHHHHHHHHHHHH-HTTCH
T ss_pred EEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCeeEEEecCCcchHHHHHHHHHHH-ccCCH
Confidence 77666543 333332 4689999998642 1111111 222 2 66532 2221001234555555554 45799
Q ss_pred HHHHHHHHHHHHHHhhhhc
Q 009851 459 DFKARALELKEKAMSSVRE 477 (524)
Q Consensus 459 ~~r~~a~~l~~~~~~~~~~ 477 (524)
.++++.+..++..++.+.+
T Consensus 147 ~l~~kl~~~r~~~~~~v~~ 165 (170)
T 1xmp_A 147 DIHDALELRREAIEKDVRE 165 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999988875443
No 128
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=54.14 E-value=11 Score=34.42 Aligned_cols=35 Identities=11% Similarity=0.088 Sum_probs=26.1
Q ss_pred CCccEEE-ECCCch-hHHHHHHHcCCceEEEccchHH
Q 009851 106 EKIDCFI-ADGNIG-WSMEIAKKMNVRGAVFWPSSAA 140 (524)
Q Consensus 106 ~~~D~vI-~D~~~~-~~~~~A~~lgiP~i~~~~~~~~ 140 (524)
..||+|| .|+..- -+..=|.++|||.|.+.-+.+-
T Consensus 157 ~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDTn~d 193 (256)
T 2vqe_B 157 RLPDAIFVVDPTKEAIAVREARKLFIPVIALADTDSD 193 (256)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHHTTCCCEECCCTTSC
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEecCCCC
Confidence 4788766 676544 6788899999999998765443
No 129
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=53.99 E-value=20 Score=31.51 Aligned_cols=44 Identities=16% Similarity=0.138 Sum_probs=37.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcChhhH
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRV 46 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~i 46 (524)
+.+|++.+.++..|-....-++..|..+|++|..+......+.+
T Consensus 88 ~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l 131 (210)
T 1y80_A 88 VGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKF 131 (210)
T ss_dssp CCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHH
T ss_pred CCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 45899999999999999999999999999999998876544443
No 130
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=53.75 E-value=43 Score=33.34 Aligned_cols=40 Identities=18% Similarity=0.351 Sum_probs=34.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcChh
Q 009851 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHK 44 (524)
Q Consensus 5 ~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~ 44 (524)
.|+++..++.|-..-...||..|+++|++|.++..+.+..
T Consensus 102 vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R~ 141 (443)
T 3dm5_A 102 ILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRP 141 (443)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSST
T ss_pred EEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcch
Confidence 3456777788999999999999999999999999876644
No 131
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=53.56 E-value=14 Score=34.08 Aligned_cols=36 Identities=28% Similarity=0.326 Sum_probs=26.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
|++++|++.- + | .--..|++.|.++||+|+.++-..
T Consensus 1 M~~~~ilVtG--a-G--~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 1 MSLSKILIAG--C-G--DLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp -CCCCEEEEC--C-S--HHHHHHHHHHHHTTCCEEEEECTT
T ss_pred CCCCcEEEEC--C-C--HHHHHHHHHHHHCCCEEEEEeCCc
Confidence 7777877763 4 6 345678999999999999997643
No 132
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=53.38 E-value=92 Score=26.47 Aligned_cols=78 Identities=10% Similarity=-0.010 Sum_probs=43.0
Q ss_pred eEEeccChh-hhhcCCCcceEEecCChhhHHHH---HHcCCceeccCcccchhhhHHhhccccceeeEEecCCCCCCCHH
Q 009851 370 QMISWAPQL-RVLNHPSIACFLSHCGWNSTMEG---VSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITRE 445 (524)
Q Consensus 370 ~v~~~vpq~-~lL~~~~v~~~ItHgG~gs~~Ea---l~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~~~~~~~~~~t~~ 445 (524)
.+++..+++ .++..-+-..++-=||.||+.|+ +.+++|++++|.+. .....+.....-.+.+. -+.+
T Consensus 92 i~~~~~~~Rk~~m~~~sda~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~~~~~~i~~~------~~~~ 162 (176)
T 2iz6_A 92 IVTGLGSARDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTSLDAGLVHVA------ADVA 162 (176)
T ss_dssp EECCCCSSSCCCCGGGCSEEEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHHHCTTTEEEE------SSHH
T ss_pred EEcCCHHHHHHHHHHhCCEEEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCChhhcCeEEEc------CCHH
Confidence 344666665 33332233456667899987665 67999999999832 11111111100112221 2678
Q ss_pred HHHHHHHHHhc
Q 009851 446 EIKNKVDQVLG 456 (524)
Q Consensus 446 ~l~~ai~~~l~ 456 (524)
++.+.+.+.+.
T Consensus 163 e~~~~l~~~~~ 173 (176)
T 2iz6_A 163 GAIAAVKQLLA 173 (176)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88887777654
No 133
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=53.29 E-value=85 Score=25.06 Aligned_cols=33 Identities=6% Similarity=0.136 Sum_probs=19.0
Q ss_pred CCccEEEECCCch--hHHHHHHHc-----CCceEEEccch
Q 009851 106 EKIDCFIADGNIG--WSMEIAKKM-----NVRGAVFWPSS 138 (524)
Q Consensus 106 ~~~D~vI~D~~~~--~~~~~A~~l-----giP~i~~~~~~ 138 (524)
.+||+||.|...+ .+..+.+.+ ++|.|.+....
T Consensus 57 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 96 (153)
T 3hv2_A 57 REVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTGDP 96 (153)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEECCCC
T ss_pred CCCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEEECCC
Confidence 5678888886654 244443332 46776665443
No 134
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=52.99 E-value=55 Score=30.31 Aligned_cols=80 Identities=13% Similarity=0.123 Sum_probs=50.7
Q ss_pred CCEEEEEeCCcChhhHHHhhhcCCCCCCCeEEEecCCCCCCCCCcccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccE
Q 009851 31 GFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDC 110 (524)
Q Consensus 31 GH~Vt~~~~~~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~D~ 110 (524)
..+..+++++.+....+.. |++.+.+....+.. ......+.++++.+++ .+..+
T Consensus 178 ~~~~~v~~H~af~Yf~~~y---------Gl~~~~~~~~~~~~--------------eps~~~l~~l~~~ik~---~~v~~ 231 (286)
T 3gi1_A 178 RSKTFVTQHTAFSYLAKRF---------GLKQLGISGISPEQ--------------EPSPRQLKEIQDFVKE---YNVKT 231 (286)
T ss_dssp SCCEEEEEESCCHHHHHHT---------TCEEEEEECSCC-----------------CCHHHHHHHHHHHHH---TTCCE
T ss_pred CCCEEEEECCchHHHHHHC---------CCeEeeccccCCCC--------------CCCHHHHHHHHHHHHH---cCCCE
Confidence 3445556677777777776 67766543211111 1122335555555555 88999
Q ss_pred EEECCCch--hHHHHHHHcCCceEEEcc
Q 009851 111 FIADGNIG--WSMEIAKKMNVRGAVFWP 136 (524)
Q Consensus 111 vI~D~~~~--~~~~~A~~lgiP~i~~~~ 136 (524)
|+++.... .+-.+|+..|++.+.+.+
T Consensus 232 if~e~~~~~~~~~~la~~~g~~v~~l~p 259 (286)
T 3gi1_A 232 IFAEDNVNPKIAHAIAKSTGAKVKTLSP 259 (286)
T ss_dssp EEECTTSCTHHHHHHHHTTTCEEEECCC
T ss_pred EEEeCCCChHHHHHHHHHhCCeEEEecc
Confidence 99998766 467889999999987654
No 135
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=52.81 E-value=47 Score=30.07 Aligned_cols=33 Identities=18% Similarity=0.298 Sum_probs=26.0
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 5 ~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
|.++++.++.| =-.++|+.|++.|++|.++...
T Consensus 3 K~vlVTGas~G---IG~aia~~la~~Ga~V~~~~~~ 35 (247)
T 3ged_A 3 RGVIVTGGGHG---IGKQICLDFLEAGDKVCFIDID 35 (247)
T ss_dssp CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEecCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 56778877665 3568999999999999887654
No 136
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=52.60 E-value=13 Score=33.99 Aligned_cols=44 Identities=16% Similarity=0.176 Sum_probs=35.9
Q ss_pred CCCCEEEEEcCC---CccCHHHHHHHHHHHHhCCCEEEEEeCCcChh
Q 009851 1 MSRPRVLVMPAP---AQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHK 44 (524)
Q Consensus 1 m~~~~il~~~~~---~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~ 44 (524)
|..+|.+|++.| +-|--.-...|++.|.+||++||..--+.+..
T Consensus 20 ~~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DPYlN 66 (295)
T 2vo1_A 20 FQSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYIN 66 (295)
T ss_dssp -CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEECSSC
T ss_pred cccceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeeccccee
Confidence 567899999976 44777889999999999999999998766543
No 137
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=51.56 E-value=30 Score=33.65 Aligned_cols=36 Identities=17% Similarity=0.181 Sum_probs=30.4
Q ss_pred CEEEEEc-CCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 009851 4 PRVLVMP-APAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (524)
Q Consensus 4 ~~il~~~-~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~ 39 (524)
++|+++. -|+.|-..-...||..|+++|++|.++..
T Consensus 2 ~~i~~~~gkGG~GKTt~a~~la~~la~~g~~vllvd~ 38 (374)
T 3igf_A 2 ALILTFLGKSGVARTKIAIAAAKLLASQGKRVLLAGL 38 (374)
T ss_dssp CEEEEEECSBHHHHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred cEEEEEeCCCCCcHHHHHHHHHHHHHHCCCCeEEEeC
Confidence 4667555 45669999999999999999999999988
No 138
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=51.52 E-value=1.3e+02 Score=27.37 Aligned_cols=31 Identities=6% Similarity=-0.109 Sum_probs=21.4
Q ss_pred CCccEEEECCCch----hHHHHHHHcCCceEEEcc
Q 009851 106 EKIDCFIADGNIG----WSMEIAKKMNVRGAVFWP 136 (524)
Q Consensus 106 ~~~D~vI~D~~~~----~~~~~A~~lgiP~i~~~~ 136 (524)
.++|.||...... .....+...|||+|.+..
T Consensus 60 ~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~ 94 (305)
T 3g1w_A 60 KNPAGIAISAIDPVELTDTINKAVDAGIPIVLFDS 94 (305)
T ss_dssp HCCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESS
T ss_pred hCCCEEEEcCCCHHHHHHHHHHHHHCCCcEEEECC
Confidence 4789998765433 234556678999998764
No 139
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=51.48 E-value=99 Score=27.54 Aligned_cols=33 Identities=9% Similarity=0.111 Sum_probs=22.1
Q ss_pred CCccEEEECCCch--hHHHHHHHc----CCceEEEccch
Q 009851 106 EKIDCFIADGNIG--WSMEIAKKM----NVRGAVFWPSS 138 (524)
Q Consensus 106 ~~~D~vI~D~~~~--~~~~~A~~l----giP~i~~~~~~ 138 (524)
.+||+||.|...+ .+..+.+.+ ++|.+.++...
T Consensus 80 ~~~DlvllD~~lp~~~G~~l~~~lr~~~~~~iI~lt~~~ 118 (249)
T 3q9s_A 80 DHPDLILLDLGLPDFDGGDVVQRLRKNSALPIIVLTARD 118 (249)
T ss_dssp SCCSEEEEECCSCHHHHHHHHHHHHTTCCCCEEEEESCC
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHcCCCCCEEEEECCC
Confidence 6799999998766 345554443 57877776543
No 140
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=51.24 E-value=19 Score=29.66 Aligned_cols=47 Identities=26% Similarity=0.283 Sum_probs=35.7
Q ss_pred CCEEE-EEcCCCc-cCHHHHHHHHHHHHhCCCEEEEEeCCcChhhHHHh
Q 009851 3 RPRVL-VMPAPAQ-GHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVES 49 (524)
Q Consensus 3 ~~~il-~~~~~~~-GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~i~~~ 49 (524)
.+|++ ++-.|.. ..+--.+-++..|.++||+|++.+.+.....++-.
T Consensus 6 ~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlkLleva 54 (157)
T 1kjn_A 6 TGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLVQVA 54 (157)
T ss_dssp CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHH
T ss_pred ceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHHhheecc
Confidence 35666 5556655 44555678899999999999999999888877655
No 141
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=51.11 E-value=70 Score=31.45 Aligned_cols=140 Identities=14% Similarity=0.103 Sum_probs=77.9
Q ss_pred CceEEEeecCCCCCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeeEEeccChhhhhcCCCcce
Q 009851 309 SSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIAC 388 (524)
Q Consensus 309 ~~vV~vs~GS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~vpq~~lL~~~~v~~ 388 (524)
.+.|-|-+||.+ +....++.+..++..+..+-..+.+- ...|+...+ ++-+..--..+.|
T Consensus 265 ~~~V~Ii~gs~S--D~~~~~~a~~~l~~~gi~~~v~V~sa------HR~p~~~~~----------~~~~~~~~g~~~v-- 324 (425)
T 2h31_A 265 QCRVVVLMGSTS--DLGHCEKIKKACGNFGIPCELRVTSA------HKGPDETLR----------IKAEYEGDGIPTV-- 324 (425)
T ss_dssp CCEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTCHHHHHH----------HHHHHHTTCCCEE--
T ss_pred CCeEEEEecCcc--cHHHHHHHHHHHHHcCCceEEeeeec------cCCHHHHHH----------HHHHHHHCCCCeE--
Confidence 457778888754 67778888899999998865555332 344444221 1111110001123
Q ss_pred EEecCCh----hhHHHHHHcCCceeccCccc-chhhhHHh-hcc--ccceeeEEecCCCCCCCHHHHHHHHHHHhcCHHH
Q 009851 389 FLSHCGW----NSTMEGVSNGIPFLCWPYFG-DQFLNERY-ICD--FWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDF 460 (524)
Q Consensus 389 ~ItHgG~----gs~~Eal~~GvP~v~~P~~~-DQ~~na~r-v~~--~lG~G~~~~~~~~~~~t~~~l~~ai~~~l~~~~~ 460 (524)
+|.=+|. .++..++ .-+|+|.+|... .+-..+-. +.+ . |+.+..-- ...++.-++..|. .+.|+.+
T Consensus 325 iIa~AG~~a~Lpgvva~~-t~~PVIgvP~~~~~~G~daLls~vqmp~-g~pvatv~---~~~nAa~~A~~Il-~~~~~~l 398 (425)
T 2h31_A 325 FVAVAGRSNGLGPVMSGN-TAYPVISCPPLTPDWGVQDVWSSLRLPS-GLGCSTVL---SPEGSAQFAAQIF-GLSNHLV 398 (425)
T ss_dssp EEEECCSSCCHHHHHHHH-CSSCEEECCCCCTTTHHHHGGGTSSCCS-SCCCEECC---CHHHHHHHHHHHH-HTTCHHH
T ss_pred EEEEcCcccchHhHHhcc-CCCCEEEeeCccccccHHHHHHHhcCCC-CCceEEec---CchHHHHHHHHHH-ccCCHHH
Confidence 6666654 2444444 579999999852 11111111 222 2 55533221 2234555555554 5578889
Q ss_pred HHHHHHHHHHHHhh
Q 009851 461 KARALELKEKAMSS 474 (524)
Q Consensus 461 r~~a~~l~~~~~~~ 474 (524)
+++.+..+...+..
T Consensus 399 ~~kl~~~~~~~~~~ 412 (425)
T 2h31_A 399 WSKLRASILNTWIS 412 (425)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 98888888877664
No 142
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=51.11 E-value=1.3e+02 Score=26.42 Aligned_cols=103 Identities=12% Similarity=0.124 Sum_probs=56.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCcC-h---hhHHHhhhcCCCCCCCeEEEecCCCCCCCCCccc
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDYN-H---KRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRND 77 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~r--GH~Vt~~~~~~~-~---~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 77 (524)
+||+++-.++.+ -+..+.++|.+. +|+|..+.+... . +..++ .|+.+..++...- .+
T Consensus 4 ~ki~vl~sG~g~---~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~---------~gIp~~~~~~~~~-----~~ 66 (212)
T 3av3_A 4 KRLAVFASGSGT---NFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAAR---------ENVPAFVFSPKDY-----PS 66 (212)
T ss_dssp EEEEEECCSSCH---HHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHH---------TTCCEEECCGGGS-----SS
T ss_pred cEEEEEEECCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHH---------cCCCEEEeCcccc-----cc
Confidence 478877766544 356677888877 789877765432 2 22222 3676665442100 00
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEECCCch-hHHHHHHHcCCceEEEccc
Q 009851 78 LGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG-WSMEIAKKMNVRGAVFWPS 137 (524)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~D~vI~D~~~~-~~~~~A~~lgiP~i~~~~~ 137 (524)
- ....+.+.+.++. .++|++|+-.+.. -...+-+...-.++-+.++
T Consensus 67 ~--------~~~~~~~~~~l~~------~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 113 (212)
T 3av3_A 67 K--------AAFESEILRELKG------RQIDWIALAGYMRLIGPTLLSAYEGKIVNIHPS 113 (212)
T ss_dssp H--------HHHHHHHHHHHHH------TTCCEEEESSCCSCCCHHHHHHTTTCEEEEESS
T ss_pred h--------hhhHHHHHHHHHh------cCCCEEEEchhhhhCCHHHHhhhcCCEEEEecC
Confidence 0 0111223334444 7899999876533 3445555665567766554
No 143
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=51.09 E-value=42 Score=30.46 Aligned_cols=36 Identities=19% Similarity=0.228 Sum_probs=26.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcC
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYN 42 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~ 42 (524)
.|.++++.++.| =-..+|++|+++|++|.++.-...
T Consensus 27 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r~~~ 62 (260)
T 3gem_A 27 SAPILITGASQR---VGLHCALRLLEHGHRVIISYRTEH 62 (260)
T ss_dssp CCCEEESSTTSH---HHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCChH
Confidence 356777765543 346899999999999998876543
No 144
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=50.36 E-value=95 Score=29.46 Aligned_cols=41 Identities=22% Similarity=0.184 Sum_probs=33.6
Q ss_pred CEEEEEc-CCCccCHHHHHHHHHHHHhCCCEEEEEeCCcChh
Q 009851 4 PRVLVMP-APAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHK 44 (524)
Q Consensus 4 ~~il~~~-~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~ 44 (524)
.+|+|+. -|+.|-..-...||..|+++|++|.++..+....
T Consensus 16 ~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D~~~~ 57 (334)
T 3iqw_A 16 LRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDPAHN 57 (334)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECCSSCH
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECCCCCC
Confidence 4566554 5677999999999999999999999999985543
No 145
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=50.36 E-value=88 Score=24.39 Aligned_cols=13 Identities=8% Similarity=-0.130 Sum_probs=9.6
Q ss_pred CCccEEEECCCch
Q 009851 106 EKIDCFIADGNIG 118 (524)
Q Consensus 106 ~~~D~vI~D~~~~ 118 (524)
.+||+||+|...+
T Consensus 50 ~~~dlii~d~~l~ 62 (142)
T 3cg4_A 50 GFSGVVLLDIMMP 62 (142)
T ss_dssp CCCEEEEEESCCS
T ss_pred cCCCEEEEeCCCC
Confidence 5688888886654
No 146
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=50.26 E-value=49 Score=33.26 Aligned_cols=99 Identities=11% Similarity=0.152 Sum_probs=54.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcChhhHHHhhhcCCCCCCCeEEEecC------CCCCCCCCccc
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIP------DGMEPWEDRND 77 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~~ 77 (524)
.|-+|++. ++-.-++.+|+.|.+.|.++. ++......+++. |+.+..+. +.+...-...+
T Consensus 10 i~~aLISV---sDK~glvelAk~L~~lGfeI~--ATgGTak~L~e~---------GI~v~~V~~vTgfPEil~GRVKTLH 75 (523)
T 3zzm_A 10 IRRALISV---YDKTGLVDLAQGLSAAGVEII--STGSTAKTIADT---------GIPVTPVEQLTGFPEVLDGRVKTLH 75 (523)
T ss_dssp CCEEEEEE---SSCTTHHHHHHHHHHTTCEEE--ECHHHHHHHHTT---------TCCCEEHHHHHSCCCCTTTTSSSCS
T ss_pred ccEEEEEE---eccccHHHHHHHHHHCCCEEE--EcchHHHHHHHc---------CCceeeccccCCCchhhCCccccCC
Confidence 34455554 456668999999999998764 666677777765 66665554 22222223333
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEECCCchhH
Q 009851 78 LGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWS 120 (524)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~D~vI~D~~~~~~ 120 (524)
+.-+-..+.+.-.+.-.+-+++..- ..+|+||++ +++.-
T Consensus 76 P~ihgGiLa~r~~~~h~~~l~~~~i---~~iDlVvvN-LYPF~ 114 (523)
T 3zzm_A 76 PRVHAGLLADLRKSEHAAALEQLGI---EAFELVVVN-LYPFS 114 (523)
T ss_dssp HHHHHHHHCCTTSHHHHHHHHHHTC---CCCSEEEEE-CCCHH
T ss_pred chhhhhhccCCCCHHHHHHHHHCCC---CceeEEEEe-CCChH
Confidence 3333333322222222222333322 678999999 44533
No 147
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=49.66 E-value=79 Score=32.18 Aligned_cols=26 Identities=15% Similarity=0.133 Sum_probs=21.6
Q ss_pred CCccEEEECCCchhHHHHHHHc-------CCceEEE
Q 009851 106 EKIDCFIADGNIGWSMEIAKKM-------NVRGAVF 134 (524)
Q Consensus 106 ~~~D~vI~D~~~~~~~~~A~~l-------giP~i~~ 134 (524)
.+||++|.+.. +..+|+++ |||++.+
T Consensus 433 ~~pDLiig~~~---~~~~a~~~~~~g~~~gip~v~i 465 (519)
T 1qgu_B 433 RQPDFMIGNSY---GKFIQRDTLAKGKAFEVPLIRL 465 (519)
T ss_dssp HCCSEEEECGG---GHHHHHHHHHHCGGGCCCEEEC
T ss_pred cCCCEEEECcc---hHHHHHHhhcccccCCCCeEEe
Confidence 67999999853 57788888 9999875
No 148
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=49.09 E-value=1.2e+02 Score=25.60 Aligned_cols=143 Identities=15% Similarity=0.150 Sum_probs=77.4
Q ss_pred eEEEeecCCCCCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeeEEeccChhhhhcCCCcceEE
Q 009851 311 VVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFL 390 (524)
Q Consensus 311 vV~vs~GS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~vpq~~lL~~~~v~~~I 390 (524)
.|-|-+||.+ +....++..+.++..+..+-..+..- ...|+.+.+. +-. .....++.||
T Consensus 14 ~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~ev~V~Sa------HR~p~~~~~~----------~~~---a~~~g~~ViI 72 (174)
T 3kuu_A 14 KIAIVMGSKS--DWATMQFAADVLTTLNVPFHVEVVSA------HRTPDRLFSF----------AEQ---AEANGLHVII 72 (174)
T ss_dssp CEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTCHHHHHHH----------HHH---TTTTTCSEEE
T ss_pred cEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEcc------cCCHHHHHHH----------HHH---HHhCCCcEEE
Confidence 4666678654 67778888899999998876555432 3444443211 100 0112233477
Q ss_pred ecCChh----hHHHHHHcCCceeccCcccchh------hhHHhhccccceeeEE-ecCCCCCCCHHHHHHHHHHHhcCHH
Q 009851 391 SHCGWN----STMEGVSNGIPFLCWPYFGDQF------LNERYICDFWKVGLKF-DRDEGGIITREEIKNKVDQVLGNQD 459 (524)
Q Consensus 391 tHgG~g----s~~Eal~~GvP~v~~P~~~DQ~------~na~rv~~~lG~G~~~-~~~~~~~~t~~~l~~ai~~~l~~~~ 459 (524)
.=.|.. ++..+ ..-+|+|.+|...-.. .-.-.+- . |+.+.. ..++..-.++.-+...|- -+.|+.
T Consensus 73 a~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~dsLlS~vqmP-~-GvPVatV~I~~a~~~nAa~lAa~IL-a~~d~~ 148 (174)
T 3kuu_A 73 AGNGGAAHLPGMLAA-KTLVPVLGVPVQSAALSGVDSLYSIVQMP-R-GIPVGTLAIGKAGAANAALLAAQIL-ALHDTE 148 (174)
T ss_dssp EEEESSCCHHHHHHH-TCSSCEEEEEECCTTTTTHHHHHHHHTCC-T-TSCCEECCSSHHHHHHHHHHHHHHH-HTTCHH
T ss_pred EECChhhhhHHHHHh-ccCCCEEEeeCCCCCCCCHHHHHHhhhCC-C-CCeeEEEEeCCccchHHHHHHHHHH-cCCCHH
Confidence 766643 33333 3468999999853211 1112222 1 554322 111001123444444443 346899
Q ss_pred HHHHHHHHHHHHHhhhhcC
Q 009851 460 FKARALELKEKAMSSVREG 478 (524)
Q Consensus 460 ~r~~a~~l~~~~~~~~~~~ 478 (524)
++++.++.++..++.+.+.
T Consensus 149 l~~kl~~~r~~~~~~v~~~ 167 (174)
T 3kuu_A 149 LAGRLAHWRQSQTDDVLDN 167 (174)
T ss_dssp HHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHhC
Confidence 9999999999888765443
No 149
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=48.96 E-value=1.2e+02 Score=25.51 Aligned_cols=142 Identities=15% Similarity=0.201 Sum_probs=76.7
Q ss_pred CceEEEeecCCCCCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeeEEeccChhhhhcCCCcce
Q 009851 309 SSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIAC 388 (524)
Q Consensus 309 ~~vV~vs~GS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~vpq~~lL~~~~v~~ 388 (524)
++.|-|-+||.+ +....++..+.++..+..+-..+..- ...|+.+.+ ++-.. ....++.
T Consensus 6 ~~~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~Sa------HR~p~~~~~----------~~~~a---~~~g~~V 64 (169)
T 3trh_A 6 KIFVAILMGSDS--DLSTMETAFTELKSLGIPFEAHILSA------HRTPKETVE----------FVENA---DNRGCAV 64 (169)
T ss_dssp CCEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTSHHHHHH----------HHHHH---HHTTEEE
T ss_pred CCcEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcc------cCCHHHHHH----------HHHHH---HhCCCcE
Confidence 346777788754 67778888999999998876555432 334444321 11110 0122344
Q ss_pred EEecCChh----hHHHHHHcCCceeccCcccchh--hhHHh-hcc--ccceeeEE-ecCCCCCCCHHHHHHHHHHHhcCH
Q 009851 389 FLSHCGWN----STMEGVSNGIPFLCWPYFGDQF--LNERY-ICD--FWKVGLKF-DRDEGGIITREEIKNKVDQVLGNQ 458 (524)
Q Consensus 389 ~ItHgG~g----s~~Eal~~GvP~v~~P~~~DQ~--~na~r-v~~--~lG~G~~~-~~~~~~~~t~~~l~~ai~~~l~~~ 458 (524)
||.=.|.. ++..+ ..-+|+|.+|...-.. ..+-. +.+ . |+.+.. ..++..-.++.-+...| --+.|+
T Consensus 65 iIa~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~-GvPVatV~I~~a~~~nAa~lAa~I-l~~~d~ 141 (169)
T 3trh_A 65 FIAAAGLAAHLAGTIAA-HTLKPVIGVPMAGGSLGGLDALLSTVQMPG-GVPVACTAIGKAGAKNAAILAAQI-IALQDK 141 (169)
T ss_dssp EEEEECSSCCHHHHHHH-TCSSCEEEEECCCSTTTTHHHHHHHHCCCT-TSCCEECCSTHHHHHHHHHHHHHH-HHTTCH
T ss_pred EEEECChhhhhHHHHHh-cCCCCEEEeecCCCCCCCHHHHHHhhcCCC-CCceEEEecCCccchHHHHHHHHH-HcCCCH
Confidence 77766643 33333 3468999999863221 11111 222 2 654322 22100112334444444 334689
Q ss_pred HHHHHHHHHHHHHHhh
Q 009851 459 DFKARALELKEKAMSS 474 (524)
Q Consensus 459 ~~r~~a~~l~~~~~~~ 474 (524)
.++++.+..+++.++.
T Consensus 142 ~l~~kl~~~r~~~~~~ 157 (169)
T 3trh_A 142 SIAQKLVQQRTAKRET 157 (169)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999888774
No 150
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=48.85 E-value=1.1e+02 Score=26.02 Aligned_cols=30 Identities=23% Similarity=0.349 Sum_probs=17.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEE
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTF 36 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~ 36 (524)
+.+|+++- .|..-...|.+.|.+.|++|..
T Consensus 4 ~~~ilivd----d~~~~~~~l~~~L~~~g~~v~~ 33 (208)
T 1yio_A 4 KPTVFVVD----DDMSVREGLRNLLRSAGFEVET 33 (208)
T ss_dssp CCEEEEEC----SCHHHHHHHHHHHHTTTCEEEE
T ss_pred CCEEEEEc----CCHHHHHHHHHHHHhCCceEEE
Confidence 45666654 4555555666666666776653
No 151
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=48.72 E-value=1.2e+02 Score=26.25 Aligned_cols=31 Identities=16% Similarity=0.228 Sum_probs=20.9
Q ss_pred CCccEEEECCCch--hHHHHHHHc-----CCceEEEcc
Q 009851 106 EKIDCFIADGNIG--WSMEIAKKM-----NVRGAVFWP 136 (524)
Q Consensus 106 ~~~D~vI~D~~~~--~~~~~A~~l-----giP~i~~~~ 136 (524)
.+||+||.|...+ .+..+.+.+ ++|.+.++.
T Consensus 50 ~~~dlvllD~~l~~~~g~~~~~~l~~~~~~~~ii~lt~ 87 (233)
T 1ys7_A 50 NRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLSA 87 (233)
T ss_dssp SCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEEEC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEEc
Confidence 6799999998765 355444433 578877654
No 152
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=48.66 E-value=26 Score=32.02 Aligned_cols=101 Identities=15% Similarity=0.129 Sum_probs=62.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcChhhH-HHhhhcCCCCCCCeEEEecCCCCCCCCCcccHHHH
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRV-VESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKL 81 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~i-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 81 (524)
+.+|++.+.++-.|-....-++..|..+|++|..+......+.+ ..... .+.+.+-++-.....
T Consensus 123 ~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~vp~e~l~~~~~~------~~~d~V~lS~l~~~~--------- 187 (258)
T 2i2x_B 123 KGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDVPAEEVLAAVQK------EKPIMLTGTALMTTT--------- 187 (258)
T ss_dssp SCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEECCSHHHHHHHHH------HCCSEEEEECCCTTT---------
T ss_pred CCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHH------cCCCEEEEEeeccCC---------
Confidence 56899999999999999999999999999999988765333322 22211 144444444322221
Q ss_pred HHHHHHhccHHHHHHHHHHhcCCCCCccEEEECCCchhHHHHHHHcCC
Q 009851 82 IEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNV 129 (524)
Q Consensus 82 ~~~~~~~~~~~~~~ll~~l~~~~~~~~D~vI~D~~~~~~~~~A~~lgi 129 (524)
...++++++.+++.+ .+.-++|...... ...++..|.
T Consensus 188 --------~~~~~~~i~~l~~~~-~~~~v~vGG~~~~--~~~~~~iga 224 (258)
T 2i2x_B 188 --------MYAFKEVNDMLLENG-IKIPFACGGGAVN--QDFVSQFAL 224 (258)
T ss_dssp --------TTHHHHHHHHHHTTT-CCCCEEEESTTCC--HHHHHTSTT
T ss_pred --------HHHHHHHHHHHHhcC-CCCcEEEECccCC--HHHHHHcCC
Confidence 123556666666533 2355666664433 445666663
No 153
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=48.33 E-value=86 Score=28.56 Aligned_cols=41 Identities=10% Similarity=0.246 Sum_probs=28.0
Q ss_pred CEEEEEcCCCc-cCHHHHHHHHHHHHhCCCEEEEEeCCcChhhH
Q 009851 4 PRVLVMPAPAQ-GHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRV 46 (524)
Q Consensus 4 ~~il~~~~~~~-GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~i 46 (524)
.|.++++.++. +-+ -..+|++|+++|++|.++......+.+
T Consensus 26 ~k~vlVTGasg~~GI--G~~ia~~l~~~G~~V~~~~r~~~~~~~ 67 (280)
T 3nrc_A 26 GKKILITGLLSNKSI--AYGIAKAMHREGAELAFTYVGQFKDRV 67 (280)
T ss_dssp TCEEEECCCCSTTCH--HHHHHHHHHHTTCEEEEEECTTCHHHH
T ss_pred CCEEEEECCCCCCCH--HHHHHHHHHHcCCEEEEeeCchHHHHH
Confidence 46777776441 112 468999999999999988776533333
No 154
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=48.31 E-value=27 Score=32.43 Aligned_cols=38 Identities=16% Similarity=0.184 Sum_probs=23.8
Q ss_pred CCCCEEEEE-cCCCccCHHHH--HHHHHHHHhCCCEEEEEe
Q 009851 1 MSRPRVLVM-PAPAQGHVIPL--LEFSQCLAKHGFRVTFVN 38 (524)
Q Consensus 1 m~~~~il~~-~~~~~GH~~p~--l~LA~~L~~rGH~Vt~~~ 38 (524)
|+++||+++ ..|-..-++-. -.+.+.|.+.||+|+++-
T Consensus 20 m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~D 60 (280)
T 4gi5_A 20 FQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSD 60 (280)
T ss_dssp --CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 667899854 45544333332 245778888999999974
No 155
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=48.30 E-value=47 Score=33.05 Aligned_cols=41 Identities=17% Similarity=0.242 Sum_probs=34.9
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcChhhH
Q 009851 6 VLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRV 46 (524)
Q Consensus 6 il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~i 46 (524)
+++...|+.|-..-.+.+|...+.+|..|.+++.....+.+
T Consensus 200 iiIaG~pG~GKTtlal~ia~~~a~~g~~vl~fSlEms~~ql 240 (444)
T 3bgw_A 200 VLIAARPSMGKTAFALKQAKNMSDNDDVVNLHSLEMGKKEN 240 (444)
T ss_dssp EEEEECSSSSHHHHHHHHHHHHHHTTCEEEEECSSSCTTHH
T ss_pred EEEEeCCCCChHHHHHHHHHHHHHcCCEEEEEECCCCHHHH
Confidence 55777889999999999999999999999999988665443
No 156
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=47.84 E-value=31 Score=32.67 Aligned_cols=39 Identities=13% Similarity=0.148 Sum_probs=32.4
Q ss_pred CEEEEEc-CCCccCHHHHHHHHHHHHhCCCEEEEEeCCcC
Q 009851 4 PRVLVMP-APAQGHVIPLLEFSQCLAKHGFRVTFVNTDYN 42 (524)
Q Consensus 4 ~~il~~~-~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~ 42 (524)
.+|+|+. -|+.|-..-..+||..|+++|++|.++..+..
T Consensus 14 ~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~ 53 (324)
T 3zq6_A 14 TTFVFIGGKGGVGKTTISAATALWMARSGKKTLVISTDPA 53 (324)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred eEEEEEeCCCCchHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 3555444 56779999999999999999999999998863
No 157
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=47.33 E-value=71 Score=32.25 Aligned_cols=93 Identities=14% Similarity=0.097 Sum_probs=52.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcC-hhhHHHhhhcCCCCCCCeEEEecCCCCCCCCCcccHHHH
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYN-HKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKL 81 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~-~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 81 (524)
.+|++++..+ .| .+.+++.|.+-|-+|..+.+... .+..+..... ...+...+. ..+
T Consensus 348 GKrv~i~g~~--~~---~~~la~~L~ElGm~vv~~gt~~~~~~d~~~l~~~---~~~~~~i~~----------~~d---- 405 (492)
T 3u7q_A 348 GKRVMLYIGG--LR---PRHVIGAYEDLGMEVVGTGYEFAHNDDYDRTMKE---MGDSTLLYD----------DVT---- 405 (492)
T ss_dssp TCEEEECBSS--SH---HHHTHHHHHTTTCEEEEEEESSCCHHHHHHHHTT---SCTTCEEEE----------SCB----
T ss_pred CCEEEEECCC--ch---HHHHHHHHHHCCCEEEEEeCCCCCHHHHHHHHHh---CCCCcEEEc----------CCC----
Confidence 3577775433 33 45677788889999888766542 2222221100 000100000 011
Q ss_pred HHHHHHhccHHHHHHHHHHhcCCCCCccEEEECCCchhHHHHHHHcCCceEEE
Q 009851 82 IEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVF 134 (524)
Q Consensus 82 ~~~~~~~~~~~~~~ll~~l~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~i~~ 134 (524)
...+.++++. .+||++|.. .....+|+++|||++.+
T Consensus 406 --------~~el~~~i~~------~~pDL~ig~---~~~~~ia~k~gIP~~~~ 441 (492)
T 3u7q_A 406 --------GYEFEEFVKR------IKPDLIGSG---IKEKFIFQKMGIPFREM 441 (492)
T ss_dssp --------HHHHHHHHHH------HCCSEEEEC---HHHHHHHHHTTCCEEES
T ss_pred --------HHHHHHHHHh------cCCcEEEeC---cchhHHHHHcCCCEEec
Confidence 1124455555 689999997 44678999999999864
No 158
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=47.18 E-value=50 Score=26.97 Aligned_cols=96 Identities=14% Similarity=0.114 Sum_probs=57.7
Q ss_pred EEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcChhhHHHhhhcCCCCCCCeEEEecCCCCCCCCCcccHHHHHHHHH
Q 009851 7 LVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIEKCL 86 (524)
Q Consensus 7 l~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (524)
+|++.. ..+-.-++.+|+.|.+.|++ ++++......+++. |+....+......+.
T Consensus 27 vliSv~-d~dK~~l~~~a~~l~~lGf~--i~AT~GTa~~L~~~---------Gi~v~~v~k~~egg~------------- 81 (143)
T 2yvq_A 27 ILIGIQ-QSFRPRFLGVAEQLHNEGFK--LFATEATSDWLNAN---------NVPATPVAWPSQEGQ------------- 81 (143)
T ss_dssp EEEECC-GGGHHHHHHHHHHHHTTTCE--EEEEHHHHHHHHHT---------TCCCEEECCGGGC---------------
T ss_pred EEEEec-ccchHHHHHHHHHHHHCCCE--EEECchHHHHHHHc---------CCeEEEEEeccCCCc-------------
Confidence 444433 24567789999999999997 44455556667664 555544432211100
Q ss_pred HhccHHHHHHHHHHhcCCCCCccEEEECCCc--------hhHHHHHHHcCCceEE
Q 009851 87 QVMPGKLEELIEEINSREDEKIDCFIADGNI--------GWSMEIAKKMNVRGAV 133 (524)
Q Consensus 87 ~~~~~~~~~ll~~l~~~~~~~~D~vI~D~~~--------~~~~~~A~~lgiP~i~ 133 (524)
+...+.+.++++. .+.|+||--+.- +.....|-.+|||++.
T Consensus 82 ~~~~~~i~d~i~~------g~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T 130 (143)
T 2yvq_A 82 NPSLSSIRKLIRD------GSIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLT 130 (143)
T ss_dssp ---CBCHHHHHHT------TSCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEEC
T ss_pred ccccccHHHHHHC------CCceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEc
Confidence 0000235555555 899999975432 1345668889999986
No 159
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=47.15 E-value=74 Score=31.76 Aligned_cols=33 Identities=24% Similarity=0.347 Sum_probs=26.0
Q ss_pred HHHHHHHHhcCCCCCccEEEECCCchhHHHHHHHcCCceEEE
Q 009851 93 LEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVF 134 (524)
Q Consensus 93 ~~~ll~~l~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~i~~ 134 (524)
+++++++ .+||++|.+.. ...+|+++|||++.+
T Consensus 377 l~~~i~~------~~pDl~ig~~~---~~~~a~k~gip~~~~ 409 (458)
T 1mio_B 377 VHQWIKN------EGVDLLISNTY---GKFIAREENIPFVRF 409 (458)
T ss_dssp HHHHHHH------SCCSEEEESGG---GHHHHHHHTCCEEEC
T ss_pred HHHHHHh------cCCCEEEeCcc---hHHHHHHcCCCEEEe
Confidence 4455555 78999998854 578899999999985
No 160
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=46.95 E-value=86 Score=29.42 Aligned_cols=84 Identities=10% Similarity=-0.003 Sum_probs=53.8
Q ss_pred HHhCCCEEEEEeCCcChhhHHHhhhcCCCCCCCeEEEecCCCCCCCCCcccHHHHHHHHHHhccHHHHHHHHHHhcCCCC
Q 009851 27 LAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDE 106 (524)
Q Consensus 27 L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~ 106 (524)
|.....+..++.++.+....+.. |++.+.+....+.. .. ....+.++++.+++ .
T Consensus 185 l~~~~~~~~v~~H~af~Yfa~~y---------Gl~~~~~~~~~~~~--ep------------s~~~l~~l~~~ik~---~ 238 (312)
T 2o1e_A 185 AKKAEKKEFITQHTAFGYLAKEY---------GLKQVPIAGLSPDQ--EP------------SAASLAKLKTYAKE---H 238 (312)
T ss_dssp HHSCSCCEEEESSCTTHHHHHHT---------TCEEEECSSCCSSS--CC------------CHHHHHHHHHHTTS---S
T ss_pred hhccCCCEEEEECCchHHHHHHC---------CCeEEEeeccCCCC--CC------------CHHHHHHHHHHHHH---c
Confidence 33333445555666777766665 77776653221111 11 22346667777776 7
Q ss_pred CccEEEECCCch--hHHHHHHHcCCceEEEcc
Q 009851 107 KIDCFIADGNIG--WSMEIAKKMNVRGAVFWP 136 (524)
Q Consensus 107 ~~D~vI~D~~~~--~~~~~A~~lgiP~i~~~~ 136 (524)
+..+|+++.... .+-.+|+..|++.+.+.+
T Consensus 239 ~v~~If~e~~~~~~~~~~ia~e~g~~v~~l~~ 270 (312)
T 2o1e_A 239 NVKVIYFEEIASSKVADTLASEIGAKTEVLNT 270 (312)
T ss_dssp CCCEEECSSCCCHHHHHHHHHHTCCEEECCCC
T ss_pred CCCEEEEeCCCChHHHHHHHHHhCCcEEEecc
Confidence 899999998776 477889999999877643
No 161
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=46.94 E-value=83 Score=27.87 Aligned_cols=36 Identities=22% Similarity=0.280 Sum_probs=25.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
+.|.++++.++.| --..+|++|+++|++|.++....
T Consensus 4 ~~k~vlITGas~g---IG~~~a~~l~~~G~~v~~~~r~~ 39 (247)
T 3lyl_A 4 NEKVALVTGASRG---IGFEVAHALASKGATVVGTATSQ 39 (247)
T ss_dssp TTCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeCCH
Confidence 3466777755432 24689999999999998877643
No 162
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=45.93 E-value=1.2e+02 Score=27.47 Aligned_cols=31 Identities=13% Similarity=-0.057 Sum_probs=21.8
Q ss_pred CCccEEEECCCchh----HHHHHHHcCCceEEEcc
Q 009851 106 EKIDCFIADGNIGW----SMEIAKKMNVRGAVFWP 136 (524)
Q Consensus 106 ~~~D~vI~D~~~~~----~~~~A~~lgiP~i~~~~ 136 (524)
.++|.||..+.... ....+...|||+|.+..
T Consensus 60 ~~vdgiii~~~~~~~~~~~~~~~~~~giPvV~~~~ 94 (297)
T 3rot_A 60 TYPSGIATTIPSDTAFSKSLQRANKLNIPVIAVDT 94 (297)
T ss_dssp TCCSEEEECCCCSSTTHHHHHHHHHHTCCEEEESC
T ss_pred cCCCEEEEeCCCHHHHHHHHHHHHHCCCCEEEEcC
Confidence 57999997655432 34456677999999764
No 163
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=45.81 E-value=65 Score=29.25 Aligned_cols=33 Identities=21% Similarity=0.349 Sum_probs=26.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~ 39 (524)
-|+++++.++.| =-..+|+.|+++|.+|.+...
T Consensus 9 gKvalVTGas~G---IG~aia~~la~~Ga~Vvi~~~ 41 (255)
T 4g81_D 9 GKTALVTGSARG---LGFAYAEGLAAAGARVILNDI 41 (255)
T ss_dssp TCEEEETTCSSH---HHHHHHHHHHHTTCEEEECCS
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEEC
Confidence 489999987775 356899999999999877654
No 164
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=45.67 E-value=16 Score=35.07 Aligned_cols=35 Identities=23% Similarity=0.232 Sum_probs=26.7
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
|+++||+|+-.|..| ..+|..|++.||+|+++...
T Consensus 2 m~~mki~iiG~G~~G-----~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 2 IESKTYAVLGLGNGG-----HAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCcCeEEEECCCHHH-----HHHHHHHHhCCCEEEEEeCC
Confidence 567899999877666 35788999999999988653
No 165
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=45.65 E-value=97 Score=27.32 Aligned_cols=103 Identities=14% Similarity=0.147 Sum_probs=55.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHh-CCCEEEEEeCCcC-h---hhHHHhhhcCCCCCCCeEEEecCCC-CCCCCCcc
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAK-HGFRVTFVNTDYN-H---KRVVESLQGKNYLGEQIHLVSIPDG-MEPWEDRN 76 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~-rGH~Vt~~~~~~~-~---~~i~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~ 76 (524)
+.||+++..+..+.+..+ .++..+ .+++|..+.+... . +..++ .|+.+..++.. ++.
T Consensus 5 ~~riavl~SG~Gsnl~al---l~~~~~~~~~eI~~Vis~~~~a~~~~~A~~---------~gIp~~~~~~~~~~~----- 67 (215)
T 3tqr_A 5 PLPIVVLISGNGTNLQAI---IGAIQKGLAIEIRAVISNRADAYGLKRAQQ---------ADIPTHIIPHEEFPS----- 67 (215)
T ss_dssp CEEEEEEESSCCHHHHHH---HHHHHTTCSEEEEEEEESCTTCHHHHHHHH---------TTCCEEECCGGGSSS-----
T ss_pred CcEEEEEEeCCcHHHHHH---HHHHHcCCCCEEEEEEeCCcchHHHHHHHH---------cCCCEEEeCccccCc-----
Confidence 678998876665555444 444433 3688887776432 1 22333 37777666421 110
Q ss_pred cHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEECCCch-hHHHHHHHcCCceEEEccc
Q 009851 77 DLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG-WSMEIAKKMNVRGAVFWPS 137 (524)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~D~vI~D~~~~-~~~~~A~~lgiP~i~~~~~ 137 (524)
. .... .++++.+++ .++|+||+-.+.. -...+-+...-.++-+.++
T Consensus 68 --r-------~~~d---~~~~~~l~~---~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 114 (215)
T 3tqr_A 68 --R-------TDFE---STLQKTIDH---YDPKLIVLAGFMRKLGKAFVSHYSGRMINIHPS 114 (215)
T ss_dssp --H-------HHHH---HHHHHHHHT---TCCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred --h-------hHhH---HHHHHHHHh---cCCCEEEEccchhhCCHHHHhhccCCeEEeCcc
Confidence 0 0011 234444444 8999999876533 3445555555566666554
No 166
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=45.64 E-value=66 Score=30.30 Aligned_cols=35 Identities=17% Similarity=0.198 Sum_probs=26.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcC
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYN 42 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~ 42 (524)
++||+|+-.+..+ +...++|.+.||+|..+.+...
T Consensus 2 ~mrivf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~pd 36 (314)
T 3tqq_A 2 SLKIVFAGTPQFA-----VPTLRALIDSSHRVLAVYTQPD 36 (314)
T ss_dssp CCEEEEEECSGGG-----HHHHHHHHHSSSEEEEEECCCC
T ss_pred CcEEEEECCCHHH-----HHHHHHHHHCCCeEEEEEeCCC
Confidence 5689999877554 3456888899999887777443
No 167
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=45.57 E-value=1.4e+02 Score=25.23 Aligned_cols=142 Identities=15% Similarity=0.173 Sum_probs=77.9
Q ss_pred CceEEEeecCCCCCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeeEEeccChhhhhcCCCcce
Q 009851 309 SSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIAC 388 (524)
Q Consensus 309 ~~vV~vs~GS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~vpq~~lL~~~~v~~ 388 (524)
.|.|-|-+||.+ +....++..+.++..+..+-..+..- ...|+.+.+ |+-.. ....++.
T Consensus 12 ~P~V~IimGS~S--D~~v~~~a~~~l~~~gi~~ev~V~sa------HR~p~~l~~----------~~~~a---~~~g~~V 70 (173)
T 4grd_A 12 APLVGVLMGSSS--DWDVMKHAVAILQEFGVPYEAKVVSA------HRMPDEMFD----------YAEKA---RERGLRA 70 (173)
T ss_dssp SCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTSHHHHHH----------HHHHH---TTTTCSE
T ss_pred CCeEEEEeCcHh--HHHHHHHHHHHHHHcCCCEEEEEEcc------ccCHHHHHH----------HHHHH---HhcCCeE
Confidence 557888899755 66778888899999998866555432 344444321 11111 1122333
Q ss_pred EEecCCh----hhHHHHHHcCCceeccCcccchh-----hhH-HhhccccceeeEEe-cCCCCCCCHHHHHHHHHHHhcC
Q 009851 389 FLSHCGW----NSTMEGVSNGIPFLCWPYFGDQF-----LNE-RYICDFWKVGLKFD-RDEGGIITREEIKNKVDQVLGN 457 (524)
Q Consensus 389 ~ItHgG~----gs~~Eal~~GvP~v~~P~~~DQ~-----~na-~rv~~~lG~G~~~~-~~~~~~~t~~~l~~ai~~~l~~ 457 (524)
+|.=.|. .++..+ ..-+|+|.+|.-.... ..+ -.+=. |+.+..- .+++...++.-+...| -.+.|
T Consensus 71 iIa~AG~aahLpgvvA~-~t~~PVIgVPv~~~~l~G~dsLlSivqMP~--Gvpvatv~i~~~~a~NAallA~~I-La~~d 146 (173)
T 4grd_A 71 IIAGAGGAAHLPGMLAA-KTTVPVLGVPVASKYLKGVDSLHSIVQMPK--GVPVATFAIGEAGAANAALFAVSI-LSGNS 146 (173)
T ss_dssp EEEEEESSCCHHHHHHH-HCCSCEEEEEECCTTTTTHHHHHHHHCCCT--TSCCEECCSSHHHHHHHHHHHHHH-HTTSC
T ss_pred EEEeccccccchhhhee-cCCCCEEEEEcCCCCCCchhHHHHHHhCCC--CCCceEEecCCcchHHHHHHHHHH-HcCCC
Confidence 6655442 244433 5579999999754321 111 22222 5544321 1000112233344444 23568
Q ss_pred HHHHHHHHHHHHHHHhhh
Q 009851 458 QDFKARALELKEKAMSSV 475 (524)
Q Consensus 458 ~~~r~~a~~l~~~~~~~~ 475 (524)
++++++.++.+++.++.+
T Consensus 147 ~~l~~kl~~~r~~~~~~v 164 (173)
T 4grd_A 147 VDYANRLAAFRVRQNEAA 164 (173)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999988887754
No 168
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=45.56 E-value=98 Score=31.13 Aligned_cols=33 Identities=30% Similarity=0.224 Sum_probs=25.3
Q ss_pred HHHHHHHHhcCCCCCccEEEECCCchhHHHHHHHcCCceEEE
Q 009851 93 LEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVF 134 (524)
Q Consensus 93 ~~~ll~~l~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~i~~ 134 (524)
+.++++. .+||++|... ....+|+++|||++.+
T Consensus 393 l~~~i~~------~~pDL~ig~~---~~~~~a~k~gIP~~~~ 425 (483)
T 3pdi_A 393 LLKTVDE------YQADILIAGG---RNMYTALKGRVPFLDI 425 (483)
T ss_dssp HHHHHHH------TTCSEEECCG---GGHHHHHHTTCCBCCC
T ss_pred HHHHHHh------cCCCEEEECC---chhHHHHHcCCCEEEe
Confidence 4455555 7899999874 3668899999999764
No 169
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=45.55 E-value=43 Score=30.64 Aligned_cols=34 Identities=15% Similarity=0.190 Sum_probs=26.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
-|+++++.++.| =-..+|++|+++|++|.++...
T Consensus 10 ~k~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r~ 43 (281)
T 3s55_A 10 GKTALITGGARG---MGRSHAVALAEAGADIAICDRC 43 (281)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEeCCCch---HHHHHHHHHHHCCCeEEEEeCC
Confidence 467788866654 3568999999999999988754
No 170
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=45.42 E-value=32 Score=31.11 Aligned_cols=41 Identities=29% Similarity=0.431 Sum_probs=29.0
Q ss_pred CCCCEEEEEcCCCc-----------cCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 1 MSRPRVLVMPAPAQ-----------GHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 1 m~~~~il~~~~~~~-----------GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
|.++||+|+-.... -...=++...+.|.+.|++|+++++..
T Consensus 1 m~m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~g 52 (244)
T 3kkl_A 1 MTPKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSETG 52 (244)
T ss_dssp --CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCCCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 77789997765431 123566777889999999999999753
No 171
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=45.15 E-value=20 Score=33.61 Aligned_cols=32 Identities=19% Similarity=0.357 Sum_probs=26.4
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEe
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVN 38 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~ 38 (524)
|+ .||.|+-.|..|. .+|+.|+++||+|++.-
T Consensus 4 Ms-~kIgfIGLG~MG~-----~mA~~L~~~G~~V~v~d 35 (297)
T 4gbj_A 4 MS-EKIAFLGLGNLGT-----PIAEILLEAGYELVVWN 35 (297)
T ss_dssp CC-CEEEEECCSTTHH-----HHHHHHHHTTCEEEEC-
T ss_pred CC-CcEEEEecHHHHH-----HHHHHHHHCCCeEEEEe
Confidence 54 4799999998884 68999999999999864
No 172
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=44.83 E-value=46 Score=30.47 Aligned_cols=34 Identities=18% Similarity=0.249 Sum_probs=26.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
-|+++++.++.| --..+|+.|+++|++|.++...
T Consensus 10 gk~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 10 DKVVLVTGGARG---QGRSHAVKLAEEGADIILFDIC 43 (287)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEeCCCCh---HHHHHHHHHHHCCCeEEEEccc
Confidence 467788866543 3568999999999999988653
No 173
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=44.82 E-value=64 Score=31.95 Aligned_cols=36 Identities=17% Similarity=0.229 Sum_probs=26.4
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
|...||+++-. |. -.+.+++++.+.|++|.++.+..
T Consensus 4 m~~~kiLI~g~---g~--~a~~i~~aa~~~G~~~v~v~~~~ 39 (446)
T 3ouz_A 4 MEIKSILIANR---GE--IALRALRTIKEMGKKAICVYSEA 39 (446)
T ss_dssp TCCCEEEECCC---HH--HHHHHHHHHHHTTCEEEEEEEGG
T ss_pred cccceEEEECC---CH--HHHHHHHHHHHcCCEEEEEEcCc
Confidence 55678888542 22 45789999999999999886543
No 174
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=44.38 E-value=31 Score=31.36 Aligned_cols=33 Identities=9% Similarity=0.073 Sum_probs=26.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~ 39 (524)
-|+++++.++.| --..+|++|+++|++|.++..
T Consensus 11 ~k~vlVTGas~G---IG~aia~~la~~G~~V~~~~r 43 (262)
T 3ksu_A 11 NKVIVIAGGIKN---LGALTAKTFALESVNLVLHYH 43 (262)
T ss_dssp TCEEEEETCSSH---HHHHHHHHHTTSSCEEEEEES
T ss_pred CCEEEEECCCch---HHHHHHHHHHHCCCEEEEEec
Confidence 367888866654 357899999999999998764
No 175
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=44.20 E-value=1e+02 Score=23.32 Aligned_cols=32 Identities=13% Similarity=0.270 Sum_probs=17.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEE
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTF 36 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~ 36 (524)
|.+.+|+++- .+-.-...+.+.|.+.|++|..
T Consensus 1 mm~~~ilivd----d~~~~~~~l~~~l~~~~~~v~~ 32 (124)
T 1srr_A 1 MMNEKILIVD----DQSGIRILLNEVFNKEGYQTFQ 32 (124)
T ss_dssp --CCEEEEEC----SCHHHHHHHHHHHHTTTCEEEE
T ss_pred CCCceEEEEe----CCHHHHHHHHHHHHHCCcEEEE
Confidence 3345666554 3444455566666666776653
No 176
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=44.18 E-value=56 Score=29.56 Aligned_cols=34 Identities=12% Similarity=0.178 Sum_probs=25.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
-|+++++.++.| --..+|++|+++|++|.++...
T Consensus 11 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r~ 44 (264)
T 3ucx_A 11 DKVVVISGVGPA---LGTTLARRCAEQGADLVLAART 44 (264)
T ss_dssp TCEEEEESCCTT---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CcEEEEECCCcH---HHHHHHHHHHHCcCEEEEEeCC
Confidence 467777766543 3468999999999999887654
No 177
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=43.56 E-value=67 Score=29.39 Aligned_cols=33 Identities=21% Similarity=0.360 Sum_probs=25.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~ 39 (524)
.|+++++.++.| =-..+|+.|+++|++|.++..
T Consensus 29 ~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~~ 61 (280)
T 4da9_A 29 RPVAIVTGGRRG---IGLGIARALAASGFDIAITGI 61 (280)
T ss_dssp CCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEecCCCH---HHHHHHHHHHHCCCeEEEEeC
Confidence 467778765543 346899999999999998874
No 178
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=43.56 E-value=1.3e+02 Score=26.54 Aligned_cols=33 Identities=9% Similarity=0.165 Sum_probs=21.4
Q ss_pred CCccEEEECCCch--hHHHHHHHc-----CCceEEEccch
Q 009851 106 EKIDCFIADGNIG--WSMEIAKKM-----NVRGAVFWPSS 138 (524)
Q Consensus 106 ~~~D~vI~D~~~~--~~~~~A~~l-----giP~i~~~~~~ 138 (524)
.+||+||.|...+ .+..+++.+ ++|.+.++...
T Consensus 66 ~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt~~~ 105 (250)
T 3r0j_A 66 TRPDAVILDVXMPGMDGFGVLRRLRADGIDAPALFLTARD 105 (250)
T ss_dssp HCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEECST
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEECCC
Confidence 5789999997665 355554433 57877766544
No 179
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=43.49 E-value=1e+02 Score=23.19 Aligned_cols=32 Identities=16% Similarity=0.375 Sum_probs=17.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEE
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTF 36 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~ 36 (524)
|.+.+|+++- .|-.-...+.+.|.+.|++|..
T Consensus 1 m~~~~ilivd----d~~~~~~~l~~~l~~~~~~v~~ 32 (123)
T 1xhf_A 1 MQTPHILIVE----DELVTRNTLKSIFEAEGYDVFE 32 (123)
T ss_dssp -CCCEEEEEC----SCHHHHHHHHHHHHTTTCEEEE
T ss_pred CCCceEEEEe----CCHHHHHHHHHHHhhCCcEEEE
Confidence 5556666654 3444444556666666776543
No 180
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=43.36 E-value=39 Score=29.88 Aligned_cols=44 Identities=18% Similarity=0.186 Sum_probs=38.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcChhhH
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRV 46 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~i 46 (524)
+.||++.+.++-.|-....-++..|..+|++|..+......+.+
T Consensus 92 ~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~i 135 (215)
T 3ezx_A 92 AGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENV 135 (215)
T ss_dssp CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHH
T ss_pred CCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHH
Confidence 46899999999999999999999999999999999876544443
No 181
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=43.32 E-value=38 Score=31.88 Aligned_cols=40 Identities=28% Similarity=0.287 Sum_probs=31.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcChhhHHHh
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVES 49 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~i~~~ 49 (524)
+||+|+-.|+.| ..+|..|++.||+|+++.... .+.+++.
T Consensus 3 mkI~IiGaGaiG-----~~~a~~L~~~g~~V~~~~r~~-~~~i~~~ 42 (320)
T 3i83_A 3 LNILVIGTGAIG-----SFYGALLAKTGHCVSVVSRSD-YETVKAK 42 (320)
T ss_dssp CEEEEESCCHHH-----HHHHHHHHHTTCEEEEECSTT-HHHHHHH
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCCh-HHHHHhC
Confidence 689999888777 457889999999999998765 3555554
No 182
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=43.31 E-value=1.6e+02 Score=26.05 Aligned_cols=41 Identities=12% Similarity=0.337 Sum_probs=34.1
Q ss_pred cHHHHHHHHHHhcCCCCCccEEEECCCchhHHHHHHHcCCceEEEcc
Q 009851 90 PGKLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWP 136 (524)
Q Consensus 90 ~~~~~~ll~~l~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~i~~~~ 136 (524)
...++..++++.+ .++|+||.|. .+..+|+++|+|.+.+.+
T Consensus 140 ~ee~~~~i~~l~~---~G~~vVVG~~---~~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 140 EEDARGQINELKA---NGTEAVVGAG---LITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHHHHHHHHHHH---TTCCEEEESH---HHHHHHHHTTSEEEESSC
T ss_pred HHHHHHHHHHHHH---CCCCEEECCH---HHHHHHHHcCCcEEEECC
Confidence 4567788888877 7899999984 468999999999999885
No 183
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=42.93 E-value=86 Score=28.41 Aligned_cols=35 Identities=14% Similarity=0.123 Sum_probs=27.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
+-|+++++.++.| =-.++|+.|+++|.+|.++...
T Consensus 6 ~gKvalVTGas~G---IG~aiA~~la~~Ga~Vv~~~~~ 40 (254)
T 4fn4_A 6 KNKVVIVTGAGSG---IGRAIAKKFALNDSIVVAVELL 40 (254)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEeCCCCH---HHHHHHHHHHHcCCEEEEEECC
Confidence 4578899977765 3578999999999999887654
No 184
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=42.90 E-value=37 Score=31.85 Aligned_cols=39 Identities=23% Similarity=0.307 Sum_probs=30.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcChhhHHH
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVE 48 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~i~~ 48 (524)
+||+|+-.|+.| ..+|..|++.||+|+++.... .+.+++
T Consensus 3 mkI~IiGaGaiG-----~~~a~~L~~~g~~V~~~~r~~-~~~i~~ 41 (312)
T 3hn2_A 3 LRIAIVGAGALG-----LYYGALLQRSGEDVHFLLRRD-YEAIAG 41 (312)
T ss_dssp -CEEEECCSTTH-----HHHHHHHHHTSCCEEEECSTT-HHHHHH
T ss_pred CEEEEECcCHHH-----HHHHHHHHHCCCeEEEEEcCc-HHHHHh
Confidence 579999888887 456899999999999998765 455554
No 185
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=42.89 E-value=1.2e+02 Score=23.73 Aligned_cols=28 Identities=18% Similarity=0.247 Sum_probs=16.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEE
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRV 34 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~V 34 (524)
+.+|+++- .|-.-...|.+.|.+.|+.+
T Consensus 5 ~~~ILivd----d~~~~~~~l~~~L~~~~~~~ 32 (144)
T 3kht_A 5 SKRVLVVE----DNPDDIALIRRVLDRKDIHC 32 (144)
T ss_dssp CEEEEEEC----CCHHHHHHHHHHHHHTTCCE
T ss_pred CCEEEEEe----CCHHHHHHHHHHHHhcCCCe
Confidence 44566554 44455555666666666663
No 186
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=42.85 E-value=65 Score=29.49 Aligned_cols=33 Identities=21% Similarity=0.310 Sum_probs=25.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~ 39 (524)
.|+++++.++.| --..+|++|+++|++|.++.-
T Consensus 25 ~k~~lVTGas~G---IG~~ia~~la~~G~~V~~~~r 57 (281)
T 3v2h_A 25 TKTAVITGSTSG---IGLAIARTLAKAGANIVLNGF 57 (281)
T ss_dssp TCEEEEETCSSH---HHHHHHHHHHHTTCEEEEECC
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 366777766543 346899999999999988765
No 187
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=42.44 E-value=1.4e+02 Score=28.01 Aligned_cols=33 Identities=21% Similarity=0.190 Sum_probs=24.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
++||+|+..+. ......++|.+.||+|..+.+.
T Consensus 3 ~mrIvf~Gt~~-----fa~~~L~~L~~~~~~i~~Vvt~ 35 (314)
T 1fmt_A 3 SLRIIFAGTPD-----FAARHLDALLSSGHNVVGVFTQ 35 (314)
T ss_dssp CCEEEEEECSH-----HHHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEEecCH-----HHHHHHHHHHHCCCcEEEEEeC
Confidence 57899987653 2345567888889999877664
No 188
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=42.22 E-value=55 Score=29.96 Aligned_cols=33 Identities=21% Similarity=0.250 Sum_probs=25.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~ 39 (524)
-|+++++.++.| =-..+|+.|+++|++|.++..
T Consensus 11 ~k~~lVTGas~g---IG~aia~~la~~G~~V~~~~~ 43 (286)
T 3uve_A 11 GKVAFVTGAARG---QGRSHAVRLAQEGADIIAVDI 43 (286)
T ss_dssp TCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEeCCCch---HHHHHHHHHHHCCCeEEEEec
Confidence 467888866654 357899999999999998754
No 189
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=42.11 E-value=65 Score=29.61 Aligned_cols=34 Identities=18% Similarity=0.270 Sum_probs=27.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
-|+++++.++.| =-..+|+.|++.|.+|.+..-.
T Consensus 29 gKvalVTGas~G---IG~aiA~~la~~Ga~V~i~~r~ 62 (273)
T 4fgs_A 29 AKIAVITGATSG---IGLAAAKRFVAEGARVFITGRR 62 (273)
T ss_dssp TCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCcCCH---HHHHHHHHHHHCCCEEEEEECC
Confidence 489999987775 3578999999999999887654
No 190
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=41.92 E-value=83 Score=30.09 Aligned_cols=40 Identities=15% Similarity=0.145 Sum_probs=33.2
Q ss_pred CEEEEEc-CCCccCHHHHHHHHHHHH--hCCCEEEEEeCCcCh
Q 009851 4 PRVLVMP-APAQGHVIPLLEFSQCLA--KHGFRVTFVNTDYNH 43 (524)
Q Consensus 4 ~~il~~~-~~~~GH~~p~l~LA~~L~--~rGH~Vt~~~~~~~~ 43 (524)
.+|+|++ -|+.|-..-...||..|+ ++|++|.++..+...
T Consensus 18 ~~i~~~~gkGGvGKTt~a~~lA~~la~~~~g~~vllid~D~~~ 60 (348)
T 3io3_A 18 LKWIFVGGKGGVGKTTTSSSVAVQLALAQPNEQFLLISTDPAH 60 (348)
T ss_dssp CSEEEEECSTTSSHHHHHHHHHHHHHHHCTTSCEEEEECCSSC
T ss_pred cEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCCCC
Confidence 4677555 567799999999999999 999999999998543
No 191
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=41.70 E-value=83 Score=31.15 Aligned_cols=40 Identities=18% Similarity=0.211 Sum_probs=33.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhC-CCEEEEEeCCcChh
Q 009851 5 RVLVMPAPAQGHVIPLLEFSQCLAKH-GFRVTFVNTDYNHK 44 (524)
Q Consensus 5 ~il~~~~~~~GH~~p~l~LA~~L~~r-GH~Vt~~~~~~~~~ 44 (524)
.|+|+..++.|-..-...||..|+++ |++|.++..+.+..
T Consensus 102 vI~ivG~~GvGKTT~a~~LA~~l~~~~G~kVllvd~D~~r~ 142 (433)
T 2xxa_A 102 VVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRP 142 (433)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHTSCCCEEEEECCCSST
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHhcCCeEEEEecCCCCc
Confidence 45567677889999999999999999 99999999886543
No 192
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=41.66 E-value=26 Score=32.44 Aligned_cols=33 Identities=33% Similarity=0.408 Sum_probs=23.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
+||++. |+.|-+- ..|+++|.++||+|+.++-.
T Consensus 1 MkILVT--GatGfIG--~~L~~~L~~~G~~V~~l~R~ 33 (298)
T 4b4o_A 1 MRVLVG--GGTGFIG--TALTQLLNARGHEVTLVSRK 33 (298)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEECC
Confidence 355544 4445443 56899999999999998753
No 193
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=41.50 E-value=32 Score=28.99 Aligned_cols=39 Identities=21% Similarity=0.295 Sum_probs=30.0
Q ss_pred CCEEEEEcCCCc---cCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 3 RPRVLVMPAPAQ---GHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 3 ~~~il~~~~~~~---GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
..+|+++|.-+. -=-.+..+|++.|.++|.+|.|..++-
T Consensus 30 A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 71 (186)
T 2bru_C 30 SHSVIITPGYGMAVAQAQYPVAEITEKLRARGINVRFGIHPV 71 (186)
T ss_dssp CSEEEEECSBHHHHTTTHHHHHHHHHHHHHHCCEEEEEECSS
T ss_pred CCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 357888873322 134688999999999999999999874
No 194
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=41.35 E-value=12 Score=36.12 Aligned_cols=38 Identities=8% Similarity=0.122 Sum_probs=27.5
Q ss_pred CCCCEEEEEcCC-CccC---HHHHHHHHHHHHhCCCEEEEEe
Q 009851 1 MSRPRVLVMPAP-AQGH---VIPLLEFSQCLAKHGFRVTFVN 38 (524)
Q Consensus 1 m~~~~il~~~~~-~~GH---~~p~l~LA~~L~~rGH~Vt~~~ 38 (524)
|+++||+++..| +.=| +.....++++|.+.||+|..+.
T Consensus 1 M~kkkv~vl~GG~S~E~evSl~Sa~~v~~aL~~~gy~v~~i~ 42 (357)
T 4fu0_A 1 MQNKKIAVIFGGNSTEYEVSLQSASAVFENINTNKFDIIPIG 42 (357)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEE
T ss_pred CCCCEEEEEECCCccchHHHHHHHHHHHHHHhHhCCEEEEEE
Confidence 999999988544 2234 3445578999999999999874
No 195
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=41.26 E-value=73 Score=29.20 Aligned_cols=34 Identities=18% Similarity=0.175 Sum_probs=25.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
.|+++++.++.| --..+|++|+++|++|.++...
T Consensus 28 ~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 61 (283)
T 3v8b_A 28 SPVALITGAGSG---IGRATALALAADGVTVGALGRT 61 (283)
T ss_dssp CCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 467777766543 3568999999999999887654
No 196
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=41.11 E-value=1.7e+02 Score=24.96 Aligned_cols=139 Identities=15% Similarity=0.149 Sum_probs=80.2
Q ss_pred ceEEEeecCCCCCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeeEEeccChhhhhcCCCcceE
Q 009851 310 SVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACF 389 (524)
Q Consensus 310 ~vV~vs~GS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~vpq~~lL~~~~v~~~ 389 (524)
|.|-|-+||.+ +....++..+.++..+..+-..+..- ...|+.+.+. +-+. ....++.|
T Consensus 14 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa------HR~p~~l~~~----------~~~a---~~~g~~Vi 72 (183)
T 1o4v_A 14 PRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIVSA------HRTPDRMFEY----------AKNA---EERGIEVI 72 (183)
T ss_dssp CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEECCT------TTCHHHHHHH----------HHHT---TTTTCCEE
T ss_pred CeEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEEEcc------cCCHHHHHHH----------HHHH---HhCCCcEE
Confidence 47778888754 67778888889988898865555332 3344443211 1110 01123337
Q ss_pred EecCCh----hhHHHHHHcCCceeccCcccc--hhhhHHh-hcccc--ceeeEE-ecCCCCCCCHHHHHHHHHHHhcCHH
Q 009851 390 LSHCGW----NSTMEGVSNGIPFLCWPYFGD--QFLNERY-ICDFW--KVGLKF-DRDEGGIITREEIKNKVDQVLGNQD 459 (524)
Q Consensus 390 ItHgG~----gs~~Eal~~GvP~v~~P~~~D--Q~~na~r-v~~~l--G~G~~~-~~~~~~~~t~~~l~~ai~~~l~~~~ 459 (524)
|.=.|. .++..++ .-+|+|.+|.... .-..+-. +.+ + |+.+.. ..+ ...++.-+...|. .+.|+.
T Consensus 73 Ia~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivq-mP~GvpVatV~Id--~~~nAa~lAaqIl-a~~d~~ 147 (183)
T 1o4v_A 73 IAGAGGAAHLPGMVASI-THLPVIGVPVKTSTLNGLDSLFSIVQ-MPGGVPVATVAIN--NAKNAGILAASIL-GIKYPE 147 (183)
T ss_dssp EEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHT-CCTTCCCEECCTT--CHHHHHHHHHHHH-HTTCHH
T ss_pred EEecCcccccHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhc-CCCCCeeEEEecC--CchHHHHHHHHHH-hcCCHH
Confidence 766553 3444444 6799999998652 1122211 222 3 544322 221 3345666666664 457899
Q ss_pred HHHHHHHHHHHHHhh
Q 009851 460 FKARALELKEKAMSS 474 (524)
Q Consensus 460 ~r~~a~~l~~~~~~~ 474 (524)
++++.+..++..++.
T Consensus 148 l~~kL~~~r~~~~~~ 162 (183)
T 1o4v_A 148 IARKVKEYKERMKRE 162 (183)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999888775
No 197
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=40.77 E-value=47 Score=25.57 Aligned_cols=40 Identities=8% Similarity=0.096 Sum_probs=30.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
|++.||++++..+.|--.-.-.+=+.+.++|.++.+-..+
T Consensus 1 M~mkkIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~~ 40 (106)
T 1e2b_A 1 MEKKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAFP 40 (106)
T ss_dssp CCCEEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEEC
T ss_pred CCCcEEEEECCCchhHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 7788999998777655555568888888999988766554
No 198
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=40.71 E-value=18 Score=28.84 Aligned_cols=30 Identities=27% Similarity=0.137 Sum_probs=22.1
Q ss_pred CCccEEEECCCch--hHHHHHHHc---CCceEEEc
Q 009851 106 EKIDCFIADGNIG--WSMEIAKKM---NVRGAVFW 135 (524)
Q Consensus 106 ~~~D~vI~D~~~~--~~~~~A~~l---giP~i~~~ 135 (524)
.+||+||.|...+ .|..+++.+ ++|.|.++
T Consensus 52 ~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lT 86 (123)
T 2lpm_A 52 GQFDIAIIDVNLDGEPSYPVADILAERNVPFIFAT 86 (123)
T ss_dssp CCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBC
T ss_pred CCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEe
Confidence 7899999999887 456666544 68876543
No 199
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=40.64 E-value=1.7e+02 Score=26.43 Aligned_cols=35 Identities=17% Similarity=0.242 Sum_probs=26.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
-|+++++.++.| =-..+|+.|+++|++|.++.-..
T Consensus 6 ~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~~ 40 (274)
T 3e03_A 6 GKTLFITGASRG---IGLAIALRAARDGANVAIAAKSA 40 (274)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESCC
T ss_pred CcEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeccc
Confidence 467777766543 34688999999999999887543
No 200
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=40.64 E-value=36 Score=32.17 Aligned_cols=33 Identities=18% Similarity=0.209 Sum_probs=25.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~ 39 (524)
.|+++++.++.| --..+|++|+++|++|....-
T Consensus 5 ~k~vlVTGas~G---IG~aia~~L~~~G~~V~~~~r 37 (324)
T 3u9l_A 5 KKIILITGASSG---FGRLTAEALAGAGHRVYASMR 37 (324)
T ss_dssp CCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEecC
Confidence 467788866543 346899999999999987654
No 201
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=40.42 E-value=34 Score=27.61 Aligned_cols=42 Identities=10% Similarity=0.042 Sum_probs=31.2
Q ss_pred CCEEE-EEcCC--CccCHHHHHHHHHHHHhCCCEEEEEeCCcChh
Q 009851 3 RPRVL-VMPAP--AQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHK 44 (524)
Q Consensus 3 ~~~il-~~~~~--~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~ 44 (524)
+.|++ ++..+ +.......+.+|...++.||+|+++-...-..
T Consensus 15 ~~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~dGV~ 59 (134)
T 3mc3_A 15 XXXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIXGPX 59 (134)
T ss_dssp CCEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTTGGG
T ss_pred cceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeCcHH
Confidence 35666 44555 45677888999999999999999888765443
No 202
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=40.26 E-value=34 Score=30.61 Aligned_cols=39 Identities=23% Similarity=0.362 Sum_probs=34.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
+.+|++..-|+.|-..-++.+|..|+++|++|.++....
T Consensus 6 ~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 6 RLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred eEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 457888888999999999999999999999998887764
No 203
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=40.18 E-value=28 Score=32.24 Aligned_cols=41 Identities=22% Similarity=0.352 Sum_probs=31.4
Q ss_pred CCCCEEEEEc--CCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 1 MSRPRVLVMP--APAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 1 m~~~~il~~~--~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
|+++|++.+. -|+.|-..-...||..|+++|++|.++=.+.
T Consensus 1 M~M~kvI~v~s~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 43 (286)
T 2xj4_A 1 MAETRVIVVGNEKGGAGKSTIAVHLVTALLYGGAKVAVIDLDL 43 (286)
T ss_dssp ---CEEEEECCSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 6666666554 4577999999999999999999999987665
No 204
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=40.13 E-value=30 Score=27.44 Aligned_cols=33 Identities=15% Similarity=0.396 Sum_probs=24.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
.+||+++-. |.+ -..+|+.|.++||+|+++...
T Consensus 4 ~m~i~IiG~---G~i--G~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGI---GRV--GYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEECC---SHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECC---CHH--HHHHHHHHHhCCCeEEEEECC
Confidence 467887743 444 346899999999999998764
No 205
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=39.82 E-value=19 Score=28.99 Aligned_cols=33 Identities=15% Similarity=0.128 Sum_probs=24.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
.||+++-. |. --..+|+.|.++||+|+++....
T Consensus 7 ~~v~I~G~---G~--iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGS---EA--AGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECC---SH--HHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECC---CH--HHHHHHHHHHHCCCeEEEEECCH
Confidence 46777754 33 34679999999999999987643
No 206
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=39.75 E-value=73 Score=29.04 Aligned_cols=33 Identities=21% Similarity=0.226 Sum_probs=25.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~ 39 (524)
-|+++++.++.| =-..+|++|+++|++|.++..
T Consensus 15 gk~~lVTGas~g---IG~a~a~~la~~G~~V~~~~r 47 (280)
T 3pgx_A 15 GRVAFITGAARG---QGRSHAVRLAAEGADIIACDI 47 (280)
T ss_dssp TCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEec
Confidence 467777766543 346899999999999998864
No 207
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=39.24 E-value=1.3e+02 Score=28.32 Aligned_cols=34 Identities=24% Similarity=0.257 Sum_probs=25.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
++||+|+-.+..+ +...++|.+.||+|..+.+..
T Consensus 4 mmrIvf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~p 37 (317)
T 3rfo_A 4 MIKVVFMGTPDFS-----VPVLRRLIEDGYDVIGVVTQP 37 (317)
T ss_dssp TSEEEEECCSTTH-----HHHHHHHHHTTCEEEEEECCC
T ss_pred ceEEEEEeCCHHH-----HHHHHHHHHCCCcEEEEEeCC
Confidence 5799999877543 345678888999998877754
No 208
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=39.07 E-value=63 Score=29.89 Aligned_cols=34 Identities=18% Similarity=0.248 Sum_probs=26.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
-|+++++.++.| =-..+|+.|+++|++|.++...
T Consensus 28 gk~~lVTGas~G---IG~aia~~la~~G~~V~~~~~~ 61 (299)
T 3t7c_A 28 GKVAFITGAARG---QGRSHAITLAREGADIIAIDVC 61 (299)
T ss_dssp TCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEecc
Confidence 467888866553 3578999999999999987643
No 209
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=38.98 E-value=28 Score=28.98 Aligned_cols=35 Identities=14% Similarity=0.197 Sum_probs=28.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
.+++++..|+ =+.|++.+++.|.++|.+|+++ ...
T Consensus 24 ~~~llIaGG~--GItPl~sm~~~l~~~~~~v~l~-g~r 58 (158)
T 3lrx_A 24 GKILAIGAYT--GIVEVYPIAKAWQEIGNDVTTL-HVT 58 (158)
T ss_dssp SEEEEEEETT--HHHHHHHHHHHHHHHTCEEEEE-EEC
T ss_pred CeEEEEEccC--cHHHHHHHHHHHHhcCCcEEEE-EeC
Confidence 4677777443 3999999999999999999999 543
No 210
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=38.97 E-value=1.3e+02 Score=30.72 Aligned_cols=34 Identities=24% Similarity=0.188 Sum_probs=26.0
Q ss_pred HHHHHHHHHhcCCCCCccEEEECCCchhHHHHHHHcCCceEEE
Q 009851 92 KLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVF 134 (524)
Q Consensus 92 ~~~~ll~~l~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~i~~ 134 (524)
.+.++++. .+||++|.. .....+|+++|||++.+
T Consensus 447 el~~~i~~------~~pDl~ig~---~~~~~~a~k~gIP~~~~ 480 (533)
T 1mio_A 447 DMEVVLEK------LKPDMFFAG---IKEKFVIQKGGVLSKQL 480 (533)
T ss_dssp HHHHHHHH------HCCSEEEEC---HHHHHHHHHTTCEEEET
T ss_pred HHHHHHHh------cCCCEEEcc---cchhHHHHhcCCCEEEe
Confidence 34555655 689999987 34678899999999864
No 211
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=38.80 E-value=23 Score=33.07 Aligned_cols=35 Identities=20% Similarity=0.222 Sum_probs=26.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
|.++||+|+-.|..| ..+|..|+++||+|+++...
T Consensus 1 ~~~m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 1 SNAMKIAIAGAGAMG-----SRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp ---CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCCCeEEEECcCHHH-----HHHHHHHHhCCCcEEEEECC
Confidence 345789999877666 46789999999999998654
No 212
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=38.75 E-value=41 Score=25.89 Aligned_cols=33 Identities=12% Similarity=0.036 Sum_probs=23.9
Q ss_pred CCccEEEECCCch--hHHHHHHHc-------CCceEEEccch
Q 009851 106 EKIDCFIADGNIG--WSMEIAKKM-------NVRGAVFWPSS 138 (524)
Q Consensus 106 ~~~D~vI~D~~~~--~~~~~A~~l-------giP~i~~~~~~ 138 (524)
.+||+||.|...+ .+..+.+.+ ++|.+.++...
T Consensus 45 ~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~ 86 (122)
T 3gl9_A 45 FTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKG 86 (122)
T ss_dssp BCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCC
T ss_pred cCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCC
Confidence 6899999998766 466666554 57888776543
No 213
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=38.36 E-value=53 Score=25.04 Aligned_cols=35 Identities=17% Similarity=0.248 Sum_probs=30.2
Q ss_pred ceEEEeecCCCCCCHHHHHHHHHHHhcCCCCEEEEEcCC
Q 009851 310 SVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPD 348 (524)
Q Consensus 310 ~vV~vs~GS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~ 348 (524)
+-||+-|.| +++.+++++.-+.+.|.+++..++..
T Consensus 2 sqifvvfss----dpeilkeivreikrqgvrvvllysdq 36 (162)
T 2l82_A 2 SQIFVVFSS----DPEILKEIVREIKRQGVRVVLLYSDQ 36 (162)
T ss_dssp CEEEEEEES----CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred ceEEEEecC----CHHHHHHHHHHHHhCCeEEEEEecCc
Confidence 368888876 89999999999999999999888754
No 214
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=38.10 E-value=1e+02 Score=29.29 Aligned_cols=39 Identities=21% Similarity=0.277 Sum_probs=32.6
Q ss_pred CEEEEEc-CCCccCHHHHHHHHHHHHhCCCEEEEEeCCcC
Q 009851 4 PRVLVMP-APAQGHVIPLLEFSQCLAKHGFRVTFVNTDYN 42 (524)
Q Consensus 4 ~~il~~~-~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~ 42 (524)
.+|+|+. -|+.|-..-..+||..|+++|++|.++..+..
T Consensus 26 ~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~ 65 (349)
T 3ug7_A 26 TKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDPA 65 (349)
T ss_dssp CEEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCTT
T ss_pred CEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 4555544 56779999999999999999999999998874
No 215
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=38.07 E-value=53 Score=27.95 Aligned_cols=37 Identities=22% Similarity=0.301 Sum_probs=26.4
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
|+.++|++. |+.|- --..|+++|.++||+|+.+.-..
T Consensus 1 M~~~~ilVt--GatG~--iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 1 MAVKKIAIF--GATGQ--TGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CCCCEEEEE--STTSH--HHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCCCEEEEE--cCCcH--HHHHHHHHHHHCCCeEEEEEeCh
Confidence 666666655 33343 34688999999999999987643
No 216
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=37.43 E-value=43 Score=27.45 Aligned_cols=34 Identities=12% Similarity=0.197 Sum_probs=25.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
..+|+++-.|..| ..+|+.|.++|++|+++....
T Consensus 19 ~~~v~IiG~G~iG-----~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFGCGRLG-----SLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESCG
T ss_pred CCcEEEECCCHHH-----HHHHHHHHhCCCeEEEEECCH
Confidence 4678888544333 568999999999999987643
No 217
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=37.33 E-value=38 Score=31.40 Aligned_cols=34 Identities=15% Similarity=0.072 Sum_probs=25.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
-|+++++.++.| =-..+|++|+++|++|.++...
T Consensus 49 ~k~vlVTGas~G---IG~aia~~la~~G~~V~~~~~~ 82 (294)
T 3r3s_A 49 DRKALVTGGDSG---IGRAAAIAYAREGADVAINYLP 82 (294)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEECCG
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 367777765543 3568999999999999887654
No 218
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=37.25 E-value=27 Score=33.95 Aligned_cols=40 Identities=15% Similarity=0.260 Sum_probs=29.2
Q ss_pred CCCCEEEEEcCCCcc-C---HHHHHHHHHHH-HhCCCEEEEEeCC
Q 009851 1 MSRPRVLVMPAPAQG-H---VIPLLEFSQCL-AKHGFRVTFVNTD 40 (524)
Q Consensus 1 m~~~~il~~~~~~~G-H---~~p~l~LA~~L-~~rGH~Vt~~~~~ 40 (524)
|+|+||+++..|-.+ | +.....++++| .++||+|+.+-..
T Consensus 1 m~k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~~ 45 (377)
T 1ehi_A 1 MTKKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAIA 45 (377)
T ss_dssp --CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEEC
T ss_pred CCCcEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEEc
Confidence 888899988755333 3 34578899999 9999999998643
No 219
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=37.03 E-value=61 Score=29.07 Aligned_cols=41 Identities=27% Similarity=0.323 Sum_probs=29.5
Q ss_pred CCCCEEEEEcCCC-----------ccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 1 MSRPRVLVMPAPA-----------QGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 1 m~~~~il~~~~~~-----------~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
|.++||+|+.... .-...=+....+.|.+.|++|+++++..
T Consensus 1 m~m~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~g 52 (243)
T 1rw7_A 1 MAPKKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETG 52 (243)
T ss_dssp -CCCEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCCC
Confidence 6667888776532 1245667777888999999999999754
No 220
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=36.97 E-value=1e+02 Score=28.94 Aligned_cols=40 Identities=10% Similarity=0.149 Sum_probs=22.3
Q ss_pred CCCCEEEEEcCCCcc--CHHHH-HHHHHHHHhCCCEEEEEeCC
Q 009851 1 MSRPRVLVMPAPAQG--HVIPL-LEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 1 m~~~~il~~~~~~~G--H~~p~-l~LA~~L~~rGH~Vt~~~~~ 40 (524)
|++.+|.|+.....+ .+..+ -.+-+++.+.|.++.+....
T Consensus 1 ~~~~~Ig~i~p~~~~~~f~~~~~~g~~~~a~~~g~~~~~~~~~ 43 (350)
T 3h75_A 1 MSLTSVVFLNPGNSTETFWVSYSQFMQAAARDLGLDLRILYAE 43 (350)
T ss_dssp --CCEEEEEECSCTTCHHHHHHHHHHHHHHHHHTCEEEEEECT
T ss_pred CCCCEEEEECCCCCCChHHHHHHHHHHHHHHHcCCeEEEEECC
Confidence 778889876654433 12222 23445556678888887543
No 221
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=36.83 E-value=1.6e+02 Score=27.82 Aligned_cols=35 Identities=11% Similarity=0.102 Sum_probs=26.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
-|+++++.++.| =-..+|+.|+++|++|.++.-..
T Consensus 45 gk~vlVTGas~G---IG~aia~~La~~Ga~Vvl~~r~~ 79 (346)
T 3kvo_A 45 GCTVFITGASRG---IGKAIALKAAKDGANIVIAAKTA 79 (346)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHTTTCEEEEEESCC
T ss_pred CCEEEEeCCChH---HHHHHHHHHHHCCCEEEEEECCh
Confidence 467778866553 34688999999999999987653
No 222
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=36.79 E-value=1.9e+02 Score=24.20 Aligned_cols=140 Identities=14% Similarity=0.144 Sum_probs=76.5
Q ss_pred ceEEEeecCCCCCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeeEEeccChhhhhcCCCcceE
Q 009851 310 SVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACF 389 (524)
Q Consensus 310 ~vV~vs~GS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~vpq~~lL~~~~v~~~ 389 (524)
+.|-|-+||.+ +....++..+.++..+..+-..+-.- ...|+.+.+. +-+ .....++.|
T Consensus 4 ~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~Sa------HR~p~~~~~~----------~~~---a~~~g~~Vi 62 (163)
T 3ors_A 4 MKVAVIMGSSS--DWKIMQESCNMLDYFEIPYEKQVVSA------HRTPKMMVQF----------ASE---ARERGINII 62 (163)
T ss_dssp CCEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTSHHHHHHH----------HHH---TTTTTCCEE
T ss_pred CeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEECC------cCCHHHHHHH----------HHH---HHhCCCcEE
Confidence 35666678654 67778888889998998866555332 3444443211 100 011223347
Q ss_pred EecCChh----hHHHHHHcCCceeccCcccchh-----hhH-HhhccccceeeEE-ecCCCCCCCHHHHHHHHHHHhcCH
Q 009851 390 LSHCGWN----STMEGVSNGIPFLCWPYFGDQF-----LNE-RYICDFWKVGLKF-DRDEGGIITREEIKNKVDQVLGNQ 458 (524)
Q Consensus 390 ItHgG~g----s~~Eal~~GvP~v~~P~~~DQ~-----~na-~rv~~~lG~G~~~-~~~~~~~~t~~~l~~ai~~~l~~~ 458 (524)
|.=.|.. ++..++ .-+|+|.+|.-.... .++ -.+-. |+.+.. ..++..-.++.-+...|- -+.|+
T Consensus 63 Ia~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqmp~--GvPVatV~I~~a~~~nAa~lAa~Il-~~~d~ 138 (163)
T 3ors_A 63 IAGAGGAAHLPGMVASL-TTLPVIGVPIETKSLKGIDSLLSIVQMPG--GIPVATTAIGAAGAKNAGILAARML-SIQNP 138 (163)
T ss_dssp EEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHTCCT--TSCCEECCSTHHHHHHHHHHHHHHH-HTTCT
T ss_pred EEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhhCCC--CCceEEEEcCCcccHHHHHHHHHHH-hCCCH
Confidence 7766633 444443 669999999864321 111 22322 553322 121001234444444443 34688
Q ss_pred HHHHHHHHHHHHHHhh
Q 009851 459 DFKARALELKEKAMSS 474 (524)
Q Consensus 459 ~~r~~a~~l~~~~~~~ 474 (524)
.++++.+..++..++.
T Consensus 139 ~l~~kl~~~r~~~~~~ 154 (163)
T 3ors_A 139 SLVEKLNQYESSLIQK 154 (163)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999888764
No 223
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=36.56 E-value=38 Score=32.03 Aligned_cols=35 Identities=9% Similarity=0.111 Sum_probs=29.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
.+||.|+-.++.| +..+|+.|+++||+|+..=...
T Consensus 4 ~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 4 MKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEESSC
T ss_pred CcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcCCC
Confidence 4689999998887 5579999999999999976543
No 224
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=36.55 E-value=38 Score=30.84 Aligned_cols=37 Identities=22% Similarity=0.302 Sum_probs=27.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
|.+.|+++++.++.| --..+|++|+++|++|.++...
T Consensus 23 m~~~k~vlITGas~g---IG~a~a~~l~~~G~~V~~~~~~ 59 (272)
T 4e3z_A 23 MSDTPVVLVTGGSRG---IGAAVCRLAARQGWRVGVNYAA 59 (272)
T ss_dssp -CCSCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred ccCCCEEEEECCCch---HHHHHHHHHHHCCCEEEEEcCC
Confidence 455678888865543 3578999999999999887543
No 225
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=36.35 E-value=2.5e+02 Score=25.64 Aligned_cols=32 Identities=6% Similarity=0.051 Sum_probs=22.9
Q ss_pred CCccEEEECCCch----hHHHHHHHcCCceEEEccc
Q 009851 106 EKIDCFIADGNIG----WSMEIAKKMNVRGAVFWPS 137 (524)
Q Consensus 106 ~~~D~vI~D~~~~----~~~~~A~~lgiP~i~~~~~ 137 (524)
.++|.||..+... .....+...|||+|.+...
T Consensus 58 ~~vdgiIi~~~~~~~~~~~~~~~~~~giPvV~~~~~ 93 (330)
T 3uug_A 58 KGVKVLVIASIDGTTLSDVLKQAGEQGIKVIAYDRL 93 (330)
T ss_dssp HTCSEEEECCSSGGGGHHHHHHHHHTTCEEEEESSC
T ss_pred cCCCEEEEEcCCchhHHHHHHHHHHCCCCEEEECCC
Confidence 3789999877653 2355677789999997643
No 226
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=36.34 E-value=2.2e+02 Score=24.88 Aligned_cols=101 Identities=17% Similarity=0.143 Sum_probs=56.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCcCh----hhHHHhhhcCCCCCCCeEEEecCC-CCCCCCCcc
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDYNH----KRVVESLQGKNYLGEQIHLVSIPD-GMEPWEDRN 76 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~r--GH~Vt~~~~~~~~----~~i~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~ 76 (524)
+||+++..+..+ -+..|.+.+.+. +|+|..+.+.... +..++ .++.+..++. .+.
T Consensus 1 ~ri~vl~Sg~gs---nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~---------~gIp~~~~~~~~~~------ 62 (212)
T 1jkx_A 1 MNIVVLISGNGS---NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQ---------AGIATHTLIASAFD------ 62 (212)
T ss_dssp CEEEEEESSCCH---HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHH---------TTCEEEECCGGGCS------
T ss_pred CEEEEEEECCcH---HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHH---------cCCcEEEeCccccc------
Confidence 378877766554 356677777665 5888766654322 22222 3777776542 111
Q ss_pred cHHHHHHHHHHhccHHH-HHHHHHHhcCCCCCccEEEECCCch-hHHHHHHHcCCceEEEccc
Q 009851 77 DLGKLIEKCLQVMPGKL-EELIEEINSREDEKIDCFIADGNIG-WSMEIAKKMNVRGAVFWPS 137 (524)
Q Consensus 77 ~~~~~~~~~~~~~~~~~-~~ll~~l~~~~~~~~D~vI~D~~~~-~~~~~A~~lgiP~i~~~~~ 137 (524)
+ ++.+ .++++.+++ .++|+||+-.+.. -...+-+...-.++-+.++
T Consensus 63 ~------------r~~~~~~~~~~l~~---~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 110 (212)
T 1jkx_A 63 S------------REAYDRELIHEIDM---YAPDVVVLAGFMRILSPAFVSHYAGRLLNIHPS 110 (212)
T ss_dssp S------------HHHHHHHHHHHHGG---GCCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred c------------hhhccHHHHHHHHh---cCCCEEEEeChhhhCCHHHHhhccCCEEEEccC
Confidence 0 1111 234445554 7899999876632 3444455566667766554
No 227
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=36.23 E-value=1.6e+02 Score=25.87 Aligned_cols=96 Identities=9% Similarity=0.094 Sum_probs=52.2
Q ss_pred HHHHHHHHHhCCCEEEEEeCCcChhhHHHhhhcCCCCCCCeEEEecCCCCCCCCCcccHHHHHHHHHHhccHHHHHHHHH
Q 009851 20 LLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIEKCLQVMPGKLEELIEE 99 (524)
Q Consensus 20 ~l~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 99 (524)
...+.+.|.++|..+.+++.......+-+.. ....-+.++...+..... +--...+...++.
T Consensus 100 ~~~ll~~L~~~g~~i~i~t~~~~~~~~l~~~----gl~~~fd~i~~~~~~~~~--------------KP~p~~~~~a~~~ 161 (243)
T 4g9b_A 100 IRSLLADLRAQQISVGLASVSLNAPTILAAL----ELREFFTFCADASQLKNS--------------KPDPEIFLAACAG 161 (243)
T ss_dssp HHHHHHHHHHTTCEEEECCCCTTHHHHHHHT----TCGGGCSEECCGGGCSSC--------------TTSTHHHHHHHHH
T ss_pred HHHHHHhhhcccccceecccccchhhhhhhh----hhccccccccccccccCC--------------CCcHHHHHHHHHH
Confidence 3567788999999998888765544433321 011123333222221111 0111223444444
Q ss_pred HhcCCCCCccEEEECCCchhHHHHHHHcCCceEEEccc
Q 009851 100 INSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPS 137 (524)
Q Consensus 100 l~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~i~~~~~ 137 (524)
+.- ..-++++++-. ...+..|+..|+.+|.+...
T Consensus 162 lg~---~p~e~l~VgDs-~~di~aA~~aG~~~I~V~~g 195 (243)
T 4g9b_A 162 LGV---PPQACIGIEDA-QAGIDAINASGMRSVGIGAG 195 (243)
T ss_dssp HTS---CGGGEEEEESS-HHHHHHHHHHTCEEEEESTT
T ss_pred cCC---ChHHEEEEcCC-HHHHHHHHHcCCEEEEECCC
Confidence 432 23355555544 56899999999999998643
No 228
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=36.18 E-value=83 Score=29.02 Aligned_cols=42 Identities=19% Similarity=0.269 Sum_probs=31.3
Q ss_pred HHHHHHHHHhcCCCCCccEEEECCCch--hHHHHHHHcCCceEEEcc
Q 009851 92 KLEELIEEINSREDEKIDCFIADGNIG--WSMEIAKKMNVRGAVFWP 136 (524)
Q Consensus 92 ~~~~ll~~l~~~~~~~~D~vI~D~~~~--~~~~~A~~lgiP~i~~~~ 136 (524)
.+.++++.+++ .+..+|+++.... .+-.+|+..|++.+.+.+
T Consensus 214 ~l~~l~~~ik~---~~v~~if~e~~~~~~~~~~ia~~~g~~v~~l~~ 257 (284)
T 3cx3_A 214 QLTEIQEFVKT---YKVKTIFTESNASSKVAETLVKSTGVGLKTLNP 257 (284)
T ss_dssp HHHHHHHHHHH---TTCCCEEECSSSCCHHHHHHHSSSSCCEEECCC
T ss_pred HHHHHHHHHHH---cCCCEEEEeCCCCcHHHHHHHHHcCCeEEEecC
Confidence 34555555555 7899999998766 467889999999887543
No 229
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=36.13 E-value=47 Score=27.13 Aligned_cols=44 Identities=11% Similarity=0.230 Sum_probs=34.6
Q ss_pred CEEE-EEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcChhhHH
Q 009851 4 PRVL-VMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVV 47 (524)
Q Consensus 4 ~~il-~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~i~ 47 (524)
.|++ ++..+..-.+++.+.+|...++.|++|+++.+..-...+.
T Consensus 8 ~kl~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~~gv~~l~ 52 (144)
T 2qs7_A 8 KKLSIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTFWGLQAIT 52 (144)
T ss_dssp CEEEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHTB
T ss_pred CCEEEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEehHHHHHHh
Confidence 3555 6666677888999999999999999999999876554443
No 230
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=36.13 E-value=1.4e+02 Score=22.69 Aligned_cols=32 Identities=16% Similarity=0.287 Sum_probs=19.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEe
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVN 38 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~ 38 (524)
+.+|+++- .+-.-...|.+.|.+.|++|..+.
T Consensus 6 ~~~ilivd----d~~~~~~~l~~~L~~~g~~v~~~~ 37 (132)
T 3lte_A 6 SKRILVVD----DDQAMAAAIERVLKRDHWQVEIAH 37 (132)
T ss_dssp -CEEEEEC----SCHHHHHHHHHHHHHTTCEEEEES
T ss_pred CccEEEEE----CCHHHHHHHHHHHHHCCcEEEEeC
Confidence 35666664 455555666777777777776543
No 231
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=35.92 E-value=1.1e+02 Score=27.71 Aligned_cols=37 Identities=16% Similarity=0.072 Sum_probs=29.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcC
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYN 42 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~ 42 (524)
+-|+++++.++.| =-.++|+.|++.|.+|.++.-...
T Consensus 6 ~gKvalVTGas~G---IG~aia~~la~~Ga~Vv~~~r~~~ 42 (258)
T 4gkb_A 6 QDKVVIVTGGASG---IGGAISMRLAEERAIPVVFARHAP 42 (258)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CCCEEEEeCCCCH---HHHHHHHHHHHcCCEEEEEECCcc
Confidence 4589999977765 246889999999999998886543
No 232
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=35.75 E-value=33 Score=32.30 Aligned_cols=35 Identities=11% Similarity=0.174 Sum_probs=27.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcC
Q 009851 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYN 42 (524)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~ 42 (524)
=++||+++..+ ....++++|.++||+|.++.....
T Consensus 1 m~m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~~~ 35 (334)
T 2r85_A 1 MKVRIATYASH------SALQILKGAKDEGFETIAFGSSKV 35 (334)
T ss_dssp CCSEEEEESST------THHHHHHHHHHTTCCEEEESCGGG
T ss_pred CceEEEEECCh------hHHHHHHHHHhCCCEEEEEECCCC
Confidence 05688888865 567899999999999999887644
No 233
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=35.65 E-value=35 Score=27.54 Aligned_cols=33 Identities=12% Similarity=0.235 Sum_probs=25.4
Q ss_pred CCccEEEECCCch--hHHHHHHHc-------CCceEEEccch
Q 009851 106 EKIDCFIADGNIG--WSMEIAKKM-------NVRGAVFWPSS 138 (524)
Q Consensus 106 ~~~D~vI~D~~~~--~~~~~A~~l-------giP~i~~~~~~ 138 (524)
.+||+||.|...| -|..+++.+ ++|.+.++...
T Consensus 56 ~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~ 97 (134)
T 3to5_A 56 GDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEA 97 (134)
T ss_dssp HCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSC
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCC
Confidence 6899999999888 577777655 48888776544
No 234
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=35.50 E-value=32 Score=31.75 Aligned_cols=34 Identities=26% Similarity=0.259 Sum_probs=27.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~ 39 (524)
|+..||.|+-.|..| ..+|+.|+++||+|+++..
T Consensus 2 m~~~kV~VIGaG~mG-----~~iA~~la~~G~~V~l~d~ 35 (283)
T 4e12_A 2 TGITNVTVLGTGVLG-----SQIAFQTAFHGFAVTAYDI 35 (283)
T ss_dssp CSCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCCEEEEECCCHHH-----HHHHHHHHhCCCeEEEEeC
Confidence 455789999766656 4689999999999998754
No 235
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=35.45 E-value=1.3e+02 Score=27.51 Aligned_cols=34 Identities=18% Similarity=0.203 Sum_probs=25.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 5 ~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
|+++++.++.| =-..+|++|+++|++|.++....
T Consensus 48 k~vlVTGas~G---IG~aia~~la~~G~~V~~~~r~~ 81 (291)
T 3ijr_A 48 KNVLITGGDSG---IGRAVSIAFAKEGANIAIAYLDE 81 (291)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeCCc
Confidence 67777766543 34689999999999998887653
No 236
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=35.44 E-value=1.7e+02 Score=26.63 Aligned_cols=34 Identities=12% Similarity=0.224 Sum_probs=25.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
-|+++++.++.| =-..+|++|+++|++|.++.-.
T Consensus 8 gk~vlVTGas~G---IG~aia~~la~~G~~V~~~~r~ 41 (280)
T 3tox_A 8 GKIAIVTGASSG---IGRAAALLFAREGAKVVVTARN 41 (280)
T ss_dssp TCEEEESSTTSH---HHHHHHHHHHHTTCEEEECCSC
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEECC
Confidence 467888866543 3467999999999998776543
No 237
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=35.37 E-value=77 Score=28.94 Aligned_cols=109 Identities=10% Similarity=0.110 Sum_probs=64.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHH--------HHhC-CCEEEEEeCCcChhhHHHhhhcCCCCCCCeEEEecCCCCCCCC
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQC--------LAKH-GFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWE 73 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~--------L~~r-GH~Vt~~~~~~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~ 73 (524)
+.+|++.+.++-.|-....-++.. |..+ |++|..+......+.+.+... ..+.+.+.++......+
T Consensus 120 ~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~~~G~eVi~LG~~vp~e~iv~aa~-----e~~~d~VglS~l~t~~~ 194 (262)
T 1xrs_B 120 KIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQVANEDFIKKAV-----ELEADVLLVSQTVTQKN 194 (262)
T ss_dssp CEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEECCSSBCHHHHHHHHH-----HTTCSEEEEECCCCTTS
T ss_pred CCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHhcCCcEEEECCCCCCHHHHHHHHH-----HcCCCEEEEEeecCCcc
Confidence 468889999999999999989877 9999 999999888655444333211 12556666554333210
Q ss_pred CcccHHHHHHHHHHhccHHHHHHHHHHhcCCCCC--ccEEEECCCchhHHHHHHHcCCceEE
Q 009851 74 DRNDLGKLIEKCLQVMPGKLEELIEEINSREDEK--IDCFIADGNIGWSMEIAKKMNVRGAV 133 (524)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~--~D~vI~D~~~~~~~~~A~~lgiP~i~ 133 (524)
.....++++++.+++.+ .+ +-++|.... . ....|+.+|.-.+.
T Consensus 195 --------------~~~~~~~~~i~~L~~~g-~~~~i~vivGG~~-~-~~~~a~~iGad~~~ 239 (262)
T 1xrs_B 195 --------------VHIQNMTHLIELLEAEG-LRDRFVLLCGGPR-I-NNEIAKELGYDAGF 239 (262)
T ss_dssp --------------HHHHHHHHHHHHHHHTT-CGGGSEEEEECTT-C-CHHHHHTTTCSEEE
T ss_pred --------------chHHHHHHHHHHHHhcC-CCCCCEEEEECCc-C-CHHHHHHcCCeEEE
Confidence 01122444555554422 22 334444433 2 45568888865544
No 238
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=35.31 E-value=1.4e+02 Score=26.82 Aligned_cols=34 Identities=18% Similarity=0.245 Sum_probs=25.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
-|.++++.++.| --..+|+.|+++|++|.++...
T Consensus 27 gk~vlVTGas~g---IG~aia~~la~~G~~V~~~~r~ 60 (266)
T 3grp_A 27 GRKALVTGATGG---IGEAIARCFHAQGAIVGLHGTR 60 (266)
T ss_dssp TCEEEESSTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 467778866543 3568999999999999888654
No 239
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=35.27 E-value=2.2e+02 Score=26.23 Aligned_cols=80 Identities=14% Similarity=0.088 Sum_probs=52.2
Q ss_pred CEEEEEeCCcChhhHHHhhhcCCCCCCCeEEEecCCCCCCCCCcccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEE
Q 009851 32 FRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCF 111 (524)
Q Consensus 32 H~Vt~~~~~~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~D~v 111 (524)
-+..+++++.+....+.. |++.+.+... + .. .....+.++++.+++ .+..+|
T Consensus 190 ~~~~v~~H~af~Yf~~~y---------Gl~~~~~~~~---~-~e------------ps~~~l~~l~~~ik~---~~v~~I 241 (291)
T 1pq4_A 190 QRKFIVFHPSWAYFARDY---------NLVQIPIEVE---G-QE------------PSAQELKQLIDTAKE---NNLTMV 241 (291)
T ss_dssp CCEEEESSCCCHHHHHHT---------TCEEEESCBT---T-BC------------CCHHHHHHHHHHHHT---TTCCEE
T ss_pred CCEEEEECCchHHHHHHC---------CCEEeecccC---C-CC------------CCHHHHHHHHHHHHH---cCCCEE
Confidence 344455566667666665 6777665421 1 11 123345566666666 789999
Q ss_pred EECCCch--hHHHHHHHcCCceEEEccchH
Q 009851 112 IADGNIG--WSMEIAKKMNVRGAVFWPSSA 139 (524)
Q Consensus 112 I~D~~~~--~~~~~A~~lgiP~i~~~~~~~ 139 (524)
+++.... .+-.+|+..|++.+.+.+...
T Consensus 242 f~e~~~~~~~~~~ia~~~g~~v~~ld~l~~ 271 (291)
T 1pq4_A 242 FGETQFSTKSSEAIAAEIGAGVELLDPLAA 271 (291)
T ss_dssp EEETTSCCHHHHHHHHHHTCEEEEECTTCS
T ss_pred EEeCCCChHHHHHHHHHcCCeEEEEcCchh
Confidence 9998766 567889999999988766543
No 240
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=35.15 E-value=38 Score=30.18 Aligned_cols=35 Identities=9% Similarity=0.040 Sum_probs=25.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
+.|.++++.++.| =-..+|+.|+++|++|.++.-.
T Consensus 6 ~~k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r~ 40 (241)
T 1dhr_A 6 EARRVLVYGGRGA---LGSRCVQAFRARNWWVASIDVV 40 (241)
T ss_dssp CCCEEEEETTTSH---HHHHHHHHHHTTTCEEEEEESS
T ss_pred CCCEEEEECCCcH---HHHHHHHHHHhCCCEEEEEeCC
Confidence 3456777755443 3568999999999999987654
No 241
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii}
Probab=35.02 E-value=2.3e+02 Score=24.68 Aligned_cols=42 Identities=17% Similarity=0.149 Sum_probs=32.2
Q ss_pred EEEEcCCCccCHHHHHHHHHH-HHhCCCEEEEEeCCcChhhHH
Q 009851 6 VLVMPAPAQGHVIPLLEFSQC-LAKHGFRVTFVNTDYNHKRVV 47 (524)
Q Consensus 6 il~~~~~~~GH~~p~l~LA~~-L~~rGH~Vt~~~~~~~~~~i~ 47 (524)
+++...|+.|-..-++.+|.. +.+.|..|.+++.....+.+.
T Consensus 33 ~~i~G~pG~GKT~l~l~~~~~~~~~~~~~v~~~s~E~~~~~~~ 75 (251)
T 2zts_A 33 VLLTGGTGTGKTTFAAQFIYKGAEEYGEPGVFVTLEERARDLR 75 (251)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHHHHHCCCEEEEESSSCHHHHH
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHhcCCCceeecccCCHHHHH
Confidence 457777888999999998866 455688999999887655543
No 242
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=34.78 E-value=2.4e+02 Score=24.96 Aligned_cols=35 Identities=14% Similarity=0.161 Sum_probs=24.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcC
Q 009851 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYN 42 (524)
Q Consensus 5 ~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~ 42 (524)
|.++++.++. - --..+|+.|+++|++|.++.-...
T Consensus 5 k~vlVTGas~-g--iG~~ia~~l~~~G~~V~~~~r~~~ 39 (255)
T 2q2v_A 5 KTALVTGSTS-G--IGLGIAQVLARAGANIVLNGFGDP 39 (255)
T ss_dssp CEEEESSCSS-H--HHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CEEEEeCCCc-H--HHHHHHHHHHHCCCEEEEEeCCch
Confidence 4566664443 2 356899999999999988765443
No 243
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=34.73 E-value=27 Score=33.00 Aligned_cols=24 Identities=13% Similarity=0.173 Sum_probs=20.9
Q ss_pred HHHHHHHHHHhCCCEEEEEeCCcC
Q 009851 19 PLLEFSQCLAKHGFRVTFVNTDYN 42 (524)
Q Consensus 19 p~l~LA~~L~~rGH~Vt~~~~~~~ 42 (524)
--..+|+++.++|++|||++.+..
T Consensus 67 mG~aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 67 RGATSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp HHHHHHHHHHHTTCEEEEEEETTS
T ss_pred HHHHHHHHHHHCCCEEEEEecCCC
Confidence 567899999999999999998643
No 244
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=34.37 E-value=20 Score=31.72 Aligned_cols=35 Identities=14% Similarity=0.151 Sum_probs=26.4
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
|+++||.|+-.|..| ..+|+.|++.||+|+++...
T Consensus 21 m~mmkI~IIG~G~mG-----~~la~~l~~~g~~V~~v~~r 55 (220)
T 4huj_A 21 QSMTTYAIIGAGAIG-----SALAERFTAAQIPAIIANSR 55 (220)
T ss_dssp GGSCCEEEEECHHHH-----HHHHHHHHHTTCCEEEECTT
T ss_pred hcCCEEEEECCCHHH-----HHHHHHHHhCCCEEEEEECC
Confidence 445788888766555 46899999999999985543
No 245
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=34.36 E-value=58 Score=29.67 Aligned_cols=34 Identities=21% Similarity=0.193 Sum_probs=25.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
-|+++++.++.| =-..+|++|+++|++|.++.-.
T Consensus 13 gk~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r~ 46 (278)
T 3sx2_A 13 GKVAFITGAARG---QGRAHAVRLAADGADIIAVDLC 46 (278)
T ss_dssp TCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCeEEEEecc
Confidence 367777755542 3468899999999999888643
No 246
>2gwr_A DNA-binding response regulator MTRA; two-component regulatory system, transcription regulation, phosphorylation, OMPR family; 2.10A {Mycobacterium tuberculosis} PDB: 3nhz_A
Probab=34.23 E-value=1.5e+02 Score=25.86 Aligned_cols=31 Identities=19% Similarity=0.305 Sum_probs=20.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEe
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVN 38 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~ 38 (524)
.+|+++- .|-.-...|.+.|.+.|++|..+.
T Consensus 6 ~~ILivd----d~~~~~~~l~~~L~~~g~~v~~~~ 36 (238)
T 2gwr_A 6 QRILVVD----DDASLAEMLTIVLRGEGFDTAVIG 36 (238)
T ss_dssp CEEEEEC----SCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred CeEEEEe----CCHHHHHHHHHHHHHCCCEEEEEC
Confidence 4677765 455566677777777888876543
No 247
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=34.16 E-value=85 Score=28.31 Aligned_cols=35 Identities=17% Similarity=0.259 Sum_probs=25.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
.|.++++.++.| =-..+|+.|+++|++|.++....
T Consensus 26 ~k~vlVTGas~g---IG~~la~~l~~~G~~v~i~~~r~ 60 (267)
T 4iiu_A 26 SRSVLVTGASKG---IGRAIARQLAADGFNIGVHYHRD 60 (267)
T ss_dssp CCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeCCc
Confidence 356777755543 24689999999999998876543
No 248
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=34.06 E-value=1.3e+02 Score=26.72 Aligned_cols=34 Identities=26% Similarity=0.238 Sum_probs=25.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~ 39 (524)
+.|.++++.++.| --..+|++|+++|++|.++..
T Consensus 12 ~~k~vlITGas~g---iG~~ia~~l~~~G~~v~~~~~ 45 (256)
T 3ezl_A 12 SQRIAYVTGGMGG---IGTSICQRLHKDGFRVVAGCG 45 (256)
T ss_dssp -CEEEEETTTTSH---HHHHHHHHHHHTTEEEEEEEC
T ss_pred CCCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 4577788866543 346899999999999988773
No 249
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=34.04 E-value=1.9e+02 Score=25.75 Aligned_cols=36 Identities=19% Similarity=0.216 Sum_probs=24.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
-|.++++.++ |-----..+|+.|+++|++|.++...
T Consensus 7 ~k~vlVTGas-g~~GIG~~ia~~l~~~G~~V~~~~r~ 42 (266)
T 3oig_A 7 GRNIVVMGVA-NKRSIAWGIARSLHEAGARLIFTYAG 42 (266)
T ss_dssp TCEEEEECCC-STTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEEcCC-CCCcHHHHHHHHHHHCCCEEEEecCc
Confidence 4667777554 21012468999999999999887654
No 250
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=33.91 E-value=69 Score=26.98 Aligned_cols=41 Identities=12% Similarity=0.164 Sum_probs=30.7
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCC--CEEEEEeCCcC
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHG--FRVTFVNTDYN 42 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rG--H~Vt~~~~~~~ 42 (524)
|.+.+|.++. ++.|++--+-..++.|.+-| |+|.+++....
T Consensus 4 m~~~~V~Iim-gS~SD~~v~~~a~~~l~~~gi~~ev~V~SaHR~ 46 (169)
T 3trh_A 4 MNKIFVAILM-GSDSDLSTMETAFTELKSLGIPFEAHILSAHRT 46 (169)
T ss_dssp --CCEEEEEE-SCGGGHHHHHHHHHHHHHTTCCEEEEECCTTTS
T ss_pred CCCCcEEEEE-CcHHhHHHHHHHHHHHHHcCCCEEEEEEcccCC
Confidence 6677887776 88999999999999999888 66666655443
No 251
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=33.86 E-value=30 Score=30.31 Aligned_cols=37 Identities=24% Similarity=0.320 Sum_probs=24.7
Q ss_pred CCC-CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 1 MSR-PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 1 m~~-~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
|++ ++|++. |+.|.+ -..|++.|.++||+|+.+.-..
T Consensus 1 M~~m~~ilIt--GatG~i--G~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 1 MEKVKKIVLI--GASGFV--GSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp --CCCEEEEE--TCCHHH--HHHHHHHHHTTTCEEEEECSCG
T ss_pred CCCCCEEEEE--cCCchH--HHHHHHHHHHCCCEEEEEEcCc
Confidence 664 455554 344443 4678999999999999987653
No 252
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=33.72 E-value=1e+02 Score=27.14 Aligned_cols=107 Identities=11% Similarity=0.111 Sum_probs=52.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHh-CCCEEEEEeCCcChhhHHHhhhcCCCCCCCeEEEecCCCCCCCCCcccHHHH
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAK-HGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKL 81 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~-rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 81 (524)
+.||+|+..++.+.+..++ +++.+ .+++|..+.+.......+.+. ..|+.+..++... . .+-
T Consensus 12 ~~ri~vl~SG~gsnl~all---~~~~~~~~~eI~~Vis~~~a~~~~~A~------~~gIp~~~~~~~~--~---~~r--- 74 (215)
T 3da8_A 12 PARLVVLASGTGSLLRSLL---DAAVGDYPARVVAVGVDRECRAAEIAA------EASVPVFTVRLAD--H---PSR--- 74 (215)
T ss_dssp SEEEEEEESSCCHHHHHHH---HHSSTTCSEEEEEEEESSCCHHHHHHH------HTTCCEEECCGGG--S---SSH---
T ss_pred CcEEEEEEeCChHHHHHHH---HHHhccCCCeEEEEEeCCchHHHHHHH------HcCCCEEEeCccc--c---cch---
Confidence 5689988777655444433 44432 346887776654422221111 0367766653110 0 000
Q ss_pred HHHHHHhccHHHHHHHHHHhcCCCCCccEEEECCCch-hHHHHHHHcCCceEEEccc
Q 009851 82 IEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG-WSMEIAKKMNVRGAVFWPS 137 (524)
Q Consensus 82 ~~~~~~~~~~~~~~ll~~l~~~~~~~~D~vI~D~~~~-~~~~~A~~lgiP~i~~~~~ 137 (524)
.... .++++.+++ .++|++|+-.+.. -...+-+...-.++-+.++
T Consensus 75 -----~~~d---~~~~~~l~~---~~~Dlivlagy~~iL~~~~l~~~~~~~iNiHpS 120 (215)
T 3da8_A 75 -----DAWD---VAITAATAA---HEPDLVVSAGFMRILGPQFLSRFYGRTLNTHPA 120 (215)
T ss_dssp -----HHHH---HHHHHHHHT---TCCSEEEEEECCSCCCHHHHHHHTTTEEEEESS
T ss_pred -----hhhh---HHHHHHHHh---hCCCEEEEcCchhhCCHHHHhhccCCeEEeCcc
Confidence 0012 233444444 8999999765432 3334444444456665544
No 253
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=33.69 E-value=40 Score=30.10 Aligned_cols=34 Identities=9% Similarity=0.120 Sum_probs=26.2
Q ss_pred hcCCCcceEEecCChhhHHHHHHcCCceeccCccc
Q 009851 381 LNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFG 415 (524)
Q Consensus 381 L~~~~v~~~ItHgG~gs~~Eal~~GvP~v~~P~~~ 415 (524)
+....++.+|+.||........ -++|+|-++..+
T Consensus 59 ~~~~~~dVIISRGgta~~Lr~~-~~iPVV~I~vs~ 92 (225)
T 2pju_A 59 LANERCDAIIAAGSNGAYLKSR-LSVPVILIKPSG 92 (225)
T ss_dssp TTTSCCSEEEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred HhcCCCeEEEeCChHHHHHHhh-CCCCEEEecCCH
Confidence 4333455699999999988875 589999999853
No 254
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=33.51 E-value=40 Score=31.76 Aligned_cols=41 Identities=22% Similarity=0.298 Sum_probs=29.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcChhhHHH
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVE 48 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~i~~ 48 (524)
+.||+|+-.|+.| ..+|..|++.||+|+++..+...+.+.+
T Consensus 19 ~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~~~~~~~~~i~~ 59 (318)
T 3hwr_A 19 GMKVAIMGAGAVG-----CYYGGMLARAGHEVILIARPQHVQAIEA 59 (318)
T ss_dssp -CEEEEESCSHHH-----HHHHHHHHHTTCEEEEECCHHHHHHHHH
T ss_pred CCcEEEECcCHHH-----HHHHHHHHHCCCeEEEEEcHhHHHHHHh
Confidence 4789999888777 5678999999999999933233444444
No 255
>3pnx_A Putative sulfurtransferase DSRE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE GOL; 1.92A {Syntrophomonas wolfei}
Probab=33.30 E-value=68 Score=26.83 Aligned_cols=48 Identities=8% Similarity=0.079 Sum_probs=37.6
Q ss_pred CCCCEEE-EEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcChhhHHH
Q 009851 1 MSRPRVL-VMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVE 48 (524)
Q Consensus 1 m~~~~il-~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~i~~ 48 (524)
|++.|+. ++..+..--.++.+-||..-++.|++|+++-+..-...+++
T Consensus 2 m~~~kl~II~~sG~~dka~~a~ilA~~AaA~G~eV~iFfTf~Gl~~l~K 50 (160)
T 3pnx_A 2 MENKKMNLLLFSGDYDKALASLIIANAAREMEIEVTIFCAFWGLLLLRD 50 (160)
T ss_dssp CTTCEEEEEECCCCHHHHHHHHHHHHHHHHTTCEEEEEECGGGGGGGBC
T ss_pred CCCCcEEEEEecCCHHHHHHHHHHHHHHHHcCCCEEEEEeehhHHHhcc
Confidence 6666666 56666777889999999999999999999988765555443
No 256
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=33.24 E-value=2.6e+02 Score=24.90 Aligned_cols=31 Identities=10% Similarity=-0.137 Sum_probs=21.1
Q ss_pred CCccEEEECCCch----hHHHHHHHcCCceEEEcc
Q 009851 106 EKIDCFIADGNIG----WSMEIAKKMNVRGAVFWP 136 (524)
Q Consensus 106 ~~~D~vI~D~~~~----~~~~~A~~lgiP~i~~~~ 136 (524)
.++|.||..+... .....+...|||+|.+..
T Consensus 60 ~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~ 94 (291)
T 3l49_A 60 QKPDAIIEQLGNLDVLNPWLQKINDAGIPLFTVDT 94 (291)
T ss_dssp HCCSEEEEESSCHHHHHHHHHHHHHTTCCEEEESC
T ss_pred cCCCEEEEeCCChhhhHHHHHHHHHCCCcEEEecC
Confidence 4789988765542 234456677999998764
No 257
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=33.17 E-value=28 Score=28.13 Aligned_cols=34 Identities=12% Similarity=0.100 Sum_probs=26.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
+.||+++-+|..| ..+|+.|.++||+|+++....
T Consensus 7 ~~~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVG-----SLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECCH
Confidence 3577887665444 578999999999999998764
No 258
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=33.14 E-value=1.3e+02 Score=28.14 Aligned_cols=32 Identities=13% Similarity=0.274 Sum_probs=19.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCC--CEEEEEeC
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHG--FRVTFVNT 39 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rG--H~Vt~~~~ 39 (524)
++|++. |+.|.+ -..|+++|.++| ++|+.+..
T Consensus 25 ~~vlVt--GatG~i--G~~l~~~L~~~g~~~~v~~~~~ 58 (346)
T 4egb_A 25 MNILVT--GGAGFI--GSNFVHYMLQSYETYKIINFDA 58 (346)
T ss_dssp EEEEEE--TTTSHH--HHHHHHHHHHHCTTEEEEEEEC
T ss_pred CeEEEE--CCccHH--HHHHHHHHHhhCCCcEEEEEec
Confidence 444443 344544 357899999999 55555443
No 259
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=33.03 E-value=66 Score=31.88 Aligned_cols=41 Identities=20% Similarity=0.251 Sum_probs=33.7
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHh-CCCEEEEEeCCcChhhH
Q 009851 6 VLVMPAPAQGHVIPLLEFSQCLAK-HGFRVTFVNTDYNHKRV 46 (524)
Q Consensus 6 il~~~~~~~GH~~p~l~LA~~L~~-rGH~Vt~~~~~~~~~~i 46 (524)
+++...|+.|-..-.+.+|...+. .|..|.+++.....+.+
T Consensus 203 ~ii~G~pg~GKT~lal~ia~~~a~~~g~~vl~~slE~~~~~l 244 (444)
T 2q6t_A 203 NIIAARPAMGKTAFALTIAQNAALKEGVGVGIYSLEMPAAQL 244 (444)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHHHTTCCCEEEEESSSCHHHH
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHhCCCeEEEEECCCCHHHH
Confidence 456777899999999999999987 48999999998765443
No 260
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=32.94 E-value=1.3e+02 Score=26.31 Aligned_cols=36 Identities=25% Similarity=0.226 Sum_probs=24.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcC
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYN 42 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~ 42 (524)
.++|++. |+.|.+ -..|+++|+++||+|++++-...
T Consensus 21 ~~~ilVt--GatG~i--G~~l~~~L~~~G~~V~~~~R~~~ 56 (236)
T 3e8x_A 21 GMRVLVV--GANGKV--ARYLLSELKNKGHEPVAMVRNEE 56 (236)
T ss_dssp CCEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEESSGG
T ss_pred CCeEEEE--CCCChH--HHHHHHHHHhCCCeEEEEECChH
Confidence 4555544 333433 45789999999999999986543
No 261
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=32.83 E-value=1.9e+02 Score=26.81 Aligned_cols=33 Identities=21% Similarity=0.274 Sum_probs=25.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~ 39 (524)
-|+++++.++.| --..+|++|+++|++|.++.-
T Consensus 27 gk~vlVTGas~G---IG~aia~~la~~G~~Vv~~~r 59 (322)
T 3qlj_A 27 GRVVIVTGAGGG---IGRAHALAFAAEGARVVVNDI 59 (322)
T ss_dssp TCEEEETTTTSH---HHHHHHHHHHHTTCEEEEECC
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 467788866542 346899999999999998754
No 262
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=32.64 E-value=45 Score=27.99 Aligned_cols=39 Identities=21% Similarity=0.353 Sum_probs=30.0
Q ss_pred CCEEEEEcCCCc---cCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 3 RPRVLVMPAPAQ---GHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 3 ~~~il~~~~~~~---GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
..+|+++|.-+. ---++..+|++.|.++|.+|.|..++-
T Consensus 23 A~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 64 (180)
T 1pno_A 23 ASKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 64 (180)
T ss_dssp CSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 457788873221 134788999999999999999999974
No 263
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=32.40 E-value=32 Score=30.86 Aligned_cols=23 Identities=17% Similarity=0.235 Sum_probs=20.1
Q ss_pred HHHHHHHHHHhCCCEEEEEeCCc
Q 009851 19 PLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 19 p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
--..+|++|+++|++|+++..+.
T Consensus 31 mG~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 31 LGKIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp HHHHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHHHCCCEEEEEeCCc
Confidence 45678999999999999999865
No 264
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=32.32 E-value=2.6e+02 Score=24.61 Aligned_cols=142 Identities=11% Similarity=0.010 Sum_probs=77.9
Q ss_pred CceEEEeecCCCCCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCChhhHHhhc-CCeeEEeccChhhhhcCCCcc
Q 009851 309 SSVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVA-ARGQMISWAPQLRVLNHPSIA 387 (524)
Q Consensus 309 ~~vV~vs~GS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~-~n~~v~~~vpq~~lL~~~~v~ 387 (524)
+.++.|+.|. .-...++.|.+.+..+.+.-. .+.+.+.+... .++.+...--+.+.|... .
T Consensus 32 k~VLVVGgG~-------va~~ka~~Ll~~GA~VtVvap---------~~~~~l~~l~~~~~i~~i~~~~~~~dL~~a--d 93 (223)
T 3dfz_A 32 RSVLVVGGGT-------IATRRIKGFLQEGAAITVVAP---------TVSAEINEWEAKGQLRVKRKKVGEEDLLNV--F 93 (223)
T ss_dssp CCEEEECCSH-------HHHHHHHHHGGGCCCEEEECS---------SCCHHHHHHHHTTSCEEECSCCCGGGSSSC--S
T ss_pred CEEEEECCCH-------HHHHHHHHHHHCCCEEEEECC---------CCCHHHHHHHHcCCcEEEECCCCHhHhCCC--C
Confidence 5588888773 233456666667887765531 22333332222 345544333334556444 4
Q ss_pred eEEecCChhhHHHHHHc----CCceeccCcccchhhhH-----HhhccccceeeEEecCCCCCCCHHHHHHHHHHHhcCH
Q 009851 388 CFLSHCGWNSTMEGVSN----GIPFLCWPYFGDQFLNE-----RYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQ 458 (524)
Q Consensus 388 ~~ItHgG~gs~~Eal~~----GvP~v~~P~~~DQ~~na-----~rv~~~lG~G~~~~~~~~~~~t~~~l~~ai~~~l~~~ 458 (524)
++|.--|.-.+.+.++. |+|+-+ .|.+..+ ..+... ++-+.+.+.+....-+..|++.|.+.+...
T Consensus 94 LVIaAT~d~~~N~~I~~~ak~gi~VNv----vD~p~~~~f~~Paiv~rg-~l~iaIST~G~sP~la~~iR~~ie~~lp~~ 168 (223)
T 3dfz_A 94 FIVVATNDQAVNKFVKQHIKNDQLVNM----ASSFSDGNIQIPAQFSRG-RLSLAISTDGASPLLTKRIKEDLSSNYDES 168 (223)
T ss_dssp EEEECCCCTHHHHHHHHHSCTTCEEEC---------CCSEECCEEEEET-TEEEEEECTTSCHHHHHHHHHHHHHHSCTH
T ss_pred EEEECCCCHHHHHHHHHHHhCCCEEEE----eCCcccCeEEEeeEEEeC-CEEEEEECCCCCcHHHHHHHHHHHHHccHH
Confidence 48888887777666554 555432 3444333 223332 566666654333455788888888888542
Q ss_pred --HHHHHHHHHHHHHHh
Q 009851 459 --DFKARALELKEKAMS 473 (524)
Q Consensus 459 --~~r~~a~~l~~~~~~ 473 (524)
.+-+.+.++++.+++
T Consensus 169 ~~~~~~~~~~~R~~vk~ 185 (223)
T 3dfz_A 169 YTQYTQFLYECRVLIHR 185 (223)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 566667777777765
No 265
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=32.23 E-value=45 Score=28.04 Aligned_cols=39 Identities=15% Similarity=0.305 Sum_probs=29.8
Q ss_pred CCEEEEEcCCCc---cCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 3 RPRVLVMPAPAQ---GHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 3 ~~~il~~~~~~~---GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
..+|+++|.-+. ---++..+|++.|.++|.+|.|..++-
T Consensus 22 A~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 63 (184)
T 1d4o_A 22 ANSIIITPGYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHPV 63 (184)
T ss_dssp CSEEEEEECHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 357788873221 134688999999999999999999974
No 266
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=32.15 E-value=53 Score=28.11 Aligned_cols=40 Identities=20% Similarity=0.359 Sum_probs=26.4
Q ss_pred CCCCEEEEEcCCCccCHHHHHH-HHHHHHhCCCEEEEEeCC
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLE-FSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~-LA~~L~~rGH~Vt~~~~~ 40 (524)
|+.+||+++.....|+..-+.. +++.|.+.|++|.++...
T Consensus 3 M~M~kilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~ 43 (200)
T 2a5l_A 3 MSSPYILVLYYSRHGATAEMARQIARGVEQGGFEARVRTVP 43 (200)
T ss_dssp --CCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEBCC
T ss_pred CCcceEEEEEeCCCChHHHHHHHHHHHHhhCCCEEEEEEhh
Confidence 6666888776555677655544 466677789999887653
No 267
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=31.61 E-value=33 Score=30.54 Aligned_cols=31 Identities=13% Similarity=-0.002 Sum_probs=23.0
Q ss_pred CCccEEEECCCchh-------HHHHHHHcCCceEEEcc
Q 009851 106 EKIDCFIADGNIGW-------SMEIAKKMNVRGAVFWP 136 (524)
Q Consensus 106 ~~~D~vI~D~~~~~-------~~~~A~~lgiP~i~~~~ 136 (524)
.+||++++|..... +..+...+|+|.|.+.=
T Consensus 102 ~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVAK 139 (225)
T 2w36_A 102 TKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVAK 139 (225)
T ss_dssp SCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEES
T ss_pred CCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEEe
Confidence 58999999987664 34455556899998753
No 268
>1q57_A DNA primase/helicase; dntpase, DNA replication, transferase; HET: DNA; 3.45A {Enterobacteria phage T7} SCOP: c.37.1.11 e.13.1.2
Probab=31.61 E-value=73 Score=32.13 Aligned_cols=41 Identities=7% Similarity=0.017 Sum_probs=34.1
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhC-CCEEEEEeCCcChhhH
Q 009851 6 VLVMPAPAQGHVIPLLEFSQCLAKH-GFRVTFVNTDYNHKRV 46 (524)
Q Consensus 6 il~~~~~~~GH~~p~l~LA~~L~~r-GH~Vt~~~~~~~~~~i 46 (524)
+++...|+.|-..-.+.+|..++.+ |..|.+++.....+.+
T Consensus 245 ~li~G~pG~GKT~lal~~a~~~a~~~g~~vl~~s~E~s~~~l 286 (503)
T 1q57_A 245 IMVTSGSGMVMSTFVRQQALQWGTAMGKKVGLAMLEESVEET 286 (503)
T ss_dssp EEEEESSCHHHHHHHHHHHHHHTTTSCCCEEEEESSSCHHHH
T ss_pred EEEeecCCCCchHHHHHHHHHHHHhcCCcEEEEeccCCHHHH
Confidence 4466678899999999999999987 9999999998765444
No 269
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=31.58 E-value=32 Score=30.58 Aligned_cols=38 Identities=13% Similarity=0.096 Sum_probs=33.0
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcC
Q 009851 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYN 42 (524)
Q Consensus 5 ~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~ 42 (524)
||+|..-|+.|-..-...||..|+++|++|.++=.+..
T Consensus 2 kI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 39 (254)
T 3kjh_A 2 KLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDPD 39 (254)
T ss_dssp EEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEECTT
T ss_pred EEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 68887777889999999999999999999999876653
No 270
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=31.51 E-value=24 Score=33.65 Aligned_cols=39 Identities=15% Similarity=0.286 Sum_probs=28.6
Q ss_pred CCCCEEEEEcCCCcc--CH---HHHHHHHHHHHhCCCEEEEEeCC
Q 009851 1 MSRPRVLVMPAPAQG--HV---IPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 1 m~~~~il~~~~~~~G--H~---~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
|++.||+++..| +| |= .....++++|.+.||+|..+...
T Consensus 1 m~~~~v~vl~gG-~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (343)
T 1e4e_A 1 MNRIKVAILFGG-CSEEHDVSVKSAIEIAANINKEKYEPLYIGIT 44 (343)
T ss_dssp -CCEEEEEEEEC-SSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred CCCcEEEEEeCC-CCCCcchhHHHHHHHHHHhhhcCCEEEEEEEc
Confidence 788899988744 43 22 25677899999999999988653
No 271
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=31.47 E-value=2.3e+02 Score=25.47 Aligned_cols=34 Identities=18% Similarity=0.137 Sum_probs=25.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
-|+++++.++.| =-..+|++|+++|++|.++...
T Consensus 31 gk~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 64 (273)
T 3uf0_A 31 GRTAVVTGAGSG---IGRAIAHGYARAGAHVLAWGRT 64 (273)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEcCH
Confidence 367777766543 3468999999999999988743
No 272
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=31.44 E-value=25 Score=35.57 Aligned_cols=35 Identities=20% Similarity=0.395 Sum_probs=27.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
|+|.+|.|+-.|..| ..||+.|+++||+|++....
T Consensus 13 ~~~~~IgvIGlG~MG-----~~lA~~La~~G~~V~v~~r~ 47 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMG-----RNLALNIESRGYTVSIFNRS 47 (480)
T ss_dssp --CBSEEEECCSHHH-----HHHHHHHHTTTCCEEEECSS
T ss_pred cCCCeEEEEccHHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 788999999888776 46899999999999887643
No 273
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=31.17 E-value=94 Score=27.99 Aligned_cols=30 Identities=3% Similarity=-0.214 Sum_probs=20.2
Q ss_pred CCccEEEECCCchh-HHHHHHHcCCceEEEc
Q 009851 106 EKIDCFIADGNIGW-SMEIAKKMNVRGAVFW 135 (524)
Q Consensus 106 ~~~D~vI~D~~~~~-~~~~A~~lgiP~i~~~ 135 (524)
.++|+||.--++.. .-.+.+.++||++.+.
T Consensus 68 ~g~d~iviaCnt~~~l~~lr~~~~iPvigi~ 98 (245)
T 3qvl_A 68 QGVDGHVIASFGDPGLLAARELAQGPVIGIA 98 (245)
T ss_dssp HTCSEEEEC-CCCTTHHHHHHHCSSCEEEHH
T ss_pred CCCCEEEEeCCChhHHHHHHHHcCCCEECcc
Confidence 57898886655543 3455677899998753
No 274
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=31.01 E-value=1.7e+02 Score=26.15 Aligned_cols=36 Identities=17% Similarity=0.179 Sum_probs=26.2
Q ss_pred CEEEEEcCCCc-cCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 4 PRVLVMPAPAQ-GHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 4 ~~il~~~~~~~-GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
-|.++++.++. |-+ -..+|++|+++|++|.++....
T Consensus 20 ~k~vlITGas~~~gi--G~~~a~~l~~~G~~v~~~~~~~ 56 (267)
T 3gdg_A 20 GKVVVVTGASGPKGM--GIEAARGCAEMGAAVAITYASR 56 (267)
T ss_dssp TCEEEETTCCSSSSH--HHHHHHHHHHTSCEEEECBSSS
T ss_pred CCEEEEECCCCCCCh--HHHHHHHHHHCCCeEEEEeCCc
Confidence 46777776552 333 4689999999999999886543
No 275
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=30.95 E-value=57 Score=30.70 Aligned_cols=33 Identities=15% Similarity=0.349 Sum_probs=27.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
.+||.|+-.|..| ..+|+.|++.||+|+++...
T Consensus 31 ~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 63 (320)
T 4dll_A 31 ARKITFLGTGSMG-----LPMARRLCEAGYALQVWNRT 63 (320)
T ss_dssp CSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcCC
Confidence 3589999888777 67899999999999987543
No 276
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=30.43 E-value=36 Score=27.70 Aligned_cols=35 Identities=14% Similarity=0.181 Sum_probs=28.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
.+++++..| .=+.|++.+++.|.++|.+|+++ ...
T Consensus 19 ~~~llIaGG--~GiaPl~sm~~~l~~~~~~v~l~-g~R 53 (142)
T 3lyu_A 19 GKILAIGAY--TGIVEVYPIAKAWQEIGNDVTTL-HVT 53 (142)
T ss_dssp SEEEEEEET--THHHHHHHHHHHHHHTTCEEEEE-EEE
T ss_pred CeEEEEECc--CcHHHHHHHHHHHHhcCCcEEEE-EeC
Confidence 467777744 35899999999999999999999 543
No 277
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=30.07 E-value=40 Score=32.47 Aligned_cols=35 Identities=11% Similarity=0.189 Sum_probs=26.7
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
|+++||.|+-.|..| ..+|+.|+++||+|+++...
T Consensus 20 m~~mkIgiIGlG~mG-----~~~A~~L~~~G~~V~v~dr~ 54 (358)
T 4e21_A 20 FQSMQIGMIGLGRMG-----ADMVRRLRKGGHECVVYDLN 54 (358)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred hcCCEEEEECchHHH-----HHHHHHHHhCCCEEEEEeCC
Confidence 456789999777655 47899999999999987543
No 278
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=29.91 E-value=53 Score=30.30 Aligned_cols=36 Identities=22% Similarity=0.327 Sum_probs=26.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
+.|+++++.++.| =-..+|+.|+++|++|.++.-..
T Consensus 11 ~~k~vlITGas~G---IG~~~a~~L~~~G~~V~~~~r~~ 46 (311)
T 3o26_A 11 KRRCAVVTGGNKG---IGFEICKQLSSNGIMVVLTCRDV 46 (311)
T ss_dssp -CCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCcEEEEecCCch---HHHHHHHHHHHCCCEEEEEeCCH
Confidence 3567888866543 34689999999999998887643
No 279
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=29.90 E-value=2.3e+02 Score=23.16 Aligned_cols=23 Identities=13% Similarity=0.173 Sum_probs=19.4
Q ss_pred HHHHHHHHHhCCCEEEEEeCCcC
Q 009851 20 LLEFSQCLAKHGFRVTFVNTDYN 42 (524)
Q Consensus 20 ~l~LA~~L~~rGH~Vt~~~~~~~ 42 (524)
...+.+.|.++|+.+.++|....
T Consensus 32 ~~~~l~~L~~~g~~~~i~Tn~~~ 54 (179)
T 3l8h_A 32 SLQAIARLTQADWTVVLATNQSG 54 (179)
T ss_dssp HHHHHHHHHHTTCEEEEEEECTT
T ss_pred HHHHHHHHHHCCCEEEEEECCCc
Confidence 45788999999999999998753
No 280
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=29.76 E-value=1.2e+02 Score=24.14 Aligned_cols=51 Identities=8% Similarity=0.026 Sum_probs=32.1
Q ss_pred cCCceeccCcccchhhhHHhhccccceeeEEecCCCCCCCHHHHHHHHHHHhcCHHH
Q 009851 404 NGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGNQDF 460 (524)
Q Consensus 404 ~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~~~~~~~~~~t~~~l~~ai~~~l~~~~~ 460 (524)
..+|+|++--..+.......+ + .|+--.+. +.++.++|..+|+.++....+
T Consensus 74 ~~~pii~ls~~~~~~~~~~~~-~-~g~~~~l~----kP~~~~~L~~~i~~~~~~~~~ 124 (155)
T 1qkk_A 74 PDLPMILVTGHGDIPMAVQAI-Q-DGAYDFIA----KPFAADRLVQSARRAEEKRRL 124 (155)
T ss_dssp TTSCEEEEECGGGHHHHHHHH-H-TTCCEEEE----SSCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHH-h-cCCCeEEe----CCCCHHHHHHHHHHHHHHHHH
Confidence 478888775554433333333 3 36544443 458999999999999864443
No 281
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=29.68 E-value=36 Score=32.73 Aligned_cols=33 Identities=18% Similarity=0.341 Sum_probs=27.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
++||.|+-.|..| ..+|..|++.||+|++....
T Consensus 29 ~mkI~VIGaG~mG-----~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 29 KHPIAILGAGSWG-----TALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHTTTCCEEEECSC
T ss_pred CCeEEEECccHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 5689999887776 46899999999999998875
No 282
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=29.60 E-value=3.2e+02 Score=24.75 Aligned_cols=32 Identities=13% Similarity=0.090 Sum_probs=22.5
Q ss_pred CCccEEEECCCch----hHHHHHHHcCCceEEEccc
Q 009851 106 EKIDCFIADGNIG----WSMEIAKKMNVRGAVFWPS 137 (524)
Q Consensus 106 ~~~D~vI~D~~~~----~~~~~A~~lgiP~i~~~~~ 137 (524)
.++|.||...... .....+...|||+|.+...
T Consensus 57 ~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 92 (313)
T 3m9w_A 57 RGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRM 92 (313)
T ss_dssp TTCSEEEEECSSTTSCHHHHHHHHTTTCEEEEESSC
T ss_pred cCCCEEEEeCCChhhhHHHHHHHHHCCCeEEEECCc
Confidence 5789988776544 2455566779999987643
No 283
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=29.59 E-value=73 Score=24.18 Aligned_cols=33 Identities=9% Similarity=0.077 Sum_probs=22.8
Q ss_pred CCccEEEECCCch--hHHHHHHH----cCCceEEEccch
Q 009851 106 EKIDCFIADGNIG--WSMEIAKK----MNVRGAVFWPSS 138 (524)
Q Consensus 106 ~~~D~vI~D~~~~--~~~~~A~~----lgiP~i~~~~~~ 138 (524)
.+||+||.|...+ .+..+.+. .++|.+.++...
T Consensus 45 ~~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~~ 83 (120)
T 3f6p_A 45 LQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAKD 83 (120)
T ss_dssp TCCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEESS
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECCC
Confidence 6899999998766 34544443 368887776543
No 284
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=29.53 E-value=37 Score=31.51 Aligned_cols=37 Identities=16% Similarity=0.186 Sum_probs=25.4
Q ss_pred CC-CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 1 MS-RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 1 m~-~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
|+ +++|++. |+.|.+ -..++++|.++||+|+.++-..
T Consensus 1 M~~~~~ilVt--GatG~i--G~~l~~~L~~~g~~V~~~~R~~ 38 (313)
T 1qyd_A 1 MDKKSRVLIV--GGTGYI--GKRIVNASISLGHPTYVLFRPE 38 (313)
T ss_dssp -CCCCCEEEE--STTSTT--HHHHHHHHHHTTCCEEEECCSC
T ss_pred CCCCCEEEEE--cCCcHH--HHHHHHHHHhCCCcEEEEECCC
Confidence 65 4555555 344555 3568899999999999987653
No 285
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=29.39 E-value=53 Score=28.22 Aligned_cols=39 Identities=21% Similarity=0.353 Sum_probs=29.6
Q ss_pred CCEEEEEcCCCc---cCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 3 RPRVLVMPAPAQ---GHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 3 ~~~il~~~~~~~---GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
..+|+++|.-+. ---++..+|++.|.++|.+|.|..++-
T Consensus 46 A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 87 (203)
T 2fsv_C 46 ASKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 87 (203)
T ss_dssp CSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCcEEEEcCchHhHHHHHHHHHHHHHHHHHcCCeEEEEeccc
Confidence 357788873211 134688999999999999999999974
No 286
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=29.35 E-value=57 Score=30.44 Aligned_cols=31 Identities=13% Similarity=0.254 Sum_probs=26.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~ 39 (524)
.||.|+-.|.+|. .+|+.|++.||+|++.--
T Consensus 4 ~kIgfIGlG~MG~-----~mA~~L~~~G~~v~v~dr 34 (300)
T 3obb_A 4 KQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDL 34 (300)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CEEEEeeehHHHH-----HHHHHHHhCCCeEEEEcC
Confidence 5899999998884 689999999999998743
No 287
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=29.01 E-value=27 Score=35.43 Aligned_cols=34 Identities=15% Similarity=0.404 Sum_probs=27.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
|+||+++-.+..| +.+|+.|.++|++||++....
T Consensus 42 KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 42 KPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp SCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESSS
T ss_pred CCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCCC
Confidence 6789998866444 678999999999999998754
No 288
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=28.99 E-value=74 Score=30.22 Aligned_cols=73 Identities=8% Similarity=0.063 Sum_probs=49.0
Q ss_pred CCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeeEEeccChhhhhcCCCcceEEecCChhhHHHH
Q 009851 322 LDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEG 401 (524)
Q Consensus 322 ~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~vpq~~lL~~~~v~~~ItHgG~gs~~Ea 401 (524)
.+.+..+.+.+++.....+.||...++.+. .++.++++...+-++|+. ||=+.-...+.-+
T Consensus 62 ~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~-----------------~rlL~~lD~~~i~~~PK~--~~GySDiTaL~~a 122 (331)
T 4e5s_A 62 SISSRVQDLHEAFRDPNVKAILTTLGGYNS-----------------NGLLKYLDYDLIRENPKF--FCGYSDITALNNA 122 (331)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCSCG-----------------GGGGGGCCHHHHHTSCCE--EEECGGGHHHHHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEccccccH-----------------HHHHhhcChhHHHhCCeE--EEEecchHHHHHH
Confidence 345567779999999999999998776321 124445555555566766 7777777777777
Q ss_pred HH--cCCceeccCc
Q 009851 402 VS--NGIPFLCWPY 413 (524)
Q Consensus 402 l~--~GvP~v~~P~ 413 (524)
++ .|++.+-=|.
T Consensus 123 l~~~~G~~t~hGp~ 136 (331)
T 4e5s_A 123 IYTKTGLVTYSGPH 136 (331)
T ss_dssp HHHHHCBCEEECCC
T ss_pred HHHhhCCcEEEccc
Confidence 76 4666655444
No 289
>1j8m_F SRP54, signal recognition 54 kDa protein; signaling protein; 2.00A {Acidianus ambivalens} SCOP: a.24.13.1 c.37.1.10 PDB: 1j8y_F
Probab=28.98 E-value=2.1e+02 Score=26.48 Aligned_cols=38 Identities=18% Similarity=0.371 Sum_probs=32.5
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcCh
Q 009851 6 VLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNH 43 (524)
Q Consensus 6 il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~ 43 (524)
|+++..++.|-..-...||..|+.+|++|.++..+.+.
T Consensus 101 i~i~G~~G~GKTT~~~~la~~~~~~g~~v~l~~~D~~r 138 (297)
T 1j8m_F 101 IMLVGVQGTGKTTTAGKLAYFYKKKGFKVGLVGADVYR 138 (297)
T ss_dssp EEEECSSCSSTTHHHHHHHHHHHHTTCCEEEEECCCSS
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 44666678899999999999999999999999987654
No 290
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=28.95 E-value=54 Score=28.25 Aligned_cols=39 Identities=15% Similarity=0.301 Sum_probs=29.7
Q ss_pred CCEEEEEcCCCc---cCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 3 RPRVLVMPAPAQ---GHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 3 ~~~il~~~~~~~---GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
..+|+++|.-+. ---++..+|++.|.++|.+|.|..++-
T Consensus 45 A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 86 (207)
T 1djl_A 45 ANSIIITPGYGLCAAKAQYPIADLVKMLTEQGKKVRFGIHPV 86 (207)
T ss_dssp CSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCeEEEECCchHHHHHHhHHHHHHHHHHHHCCCeEEEEeCcc
Confidence 357788873211 134788999999999999999999974
No 291
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=28.94 E-value=38 Score=31.29 Aligned_cols=37 Identities=19% Similarity=0.291 Sum_probs=24.9
Q ss_pred CC-CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 1 MS-RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 1 m~-~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
|+ +++|++.- +.|.+ -..|+++|+++||+|+.++-..
T Consensus 1 M~~~~~ilVtG--atG~i--G~~l~~~L~~~g~~V~~l~R~~ 38 (308)
T 1qyc_A 1 MGSRSRILLIG--ATGYI--GRHVAKASLDLGHPTFLLVRES 38 (308)
T ss_dssp -CCCCCEEEES--TTSTT--HHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCCEEEEEc--CCcHH--HHHHHHHHHhCCCCEEEEECCc
Confidence 66 45555543 44544 3468899999999999887653
No 292
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=28.79 E-value=60 Score=29.62 Aligned_cols=113 Identities=17% Similarity=0.141 Sum_probs=63.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcChhhHHHhhhcCCCCCCCeEEEecCCCCCCCCCcccHHHHH
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLI 82 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 82 (524)
++|||+.---+. |---+..|+++|.+ +|+|+++.+...++.+-... .....+++..+.++. ......+....
T Consensus 11 ~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg~g~si----Tl~~pl~~~~~~~~~--~~v~GTPaDCV 82 (261)
T 3ty2_A 11 KLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRSGASNSL----TLNAPLHIKNLENGM--ISVEGTPTDCV 82 (261)
T ss_dssp CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCTTCTTCC----CCSSCEEEEECTTSC--EEESSCHHHHH
T ss_pred CCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCcCcccce----ecCCCeEEEEecCCe--EEECCCHHHHH
Confidence 578888775544 44456778888876 89999999987765543221 122345555544321 11122222222
Q ss_pred HHHHHhccHHHHHHHHHHhcCCCCCccEEEECC----------CchhHHHH---HHHcCCceEEEccc
Q 009851 83 EKCLQVMPGKLEELIEEINSREDEKIDCFIADG----------NIGWSMEI---AKKMNVRGAVFWPS 137 (524)
Q Consensus 83 ~~~~~~~~~~~~~ll~~l~~~~~~~~D~vI~D~----------~~~~~~~~---A~~lgiP~i~~~~~ 137 (524)
... +..+.. .+||+||+.. +++....+ |..+|||.|.++..
T Consensus 83 ~la-----------l~~l~~---~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~ 136 (261)
T 3ty2_A 83 HLA-----------ITGVLP---EMPDMVVAGINAGPNLGDDVWYSGTVAAAMEGRFLGLPALAVSLG 136 (261)
T ss_dssp HHH-----------TTTTSS---SCCSEEEEEEEESCCCGGGGGTCHHHHHC-CCSTTSCCEEEEEEC
T ss_pred HHH-----------HHHhcC---CCCCEEEECCcCCCCCCCCcCCchHHHHHHHHHHcCCCeEEEEcC
Confidence 222 111222 5899999642 23333333 35569999998753
No 293
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=28.49 E-value=99 Score=27.45 Aligned_cols=36 Identities=17% Similarity=0.208 Sum_probs=27.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
+.|.++++.++.| =-..+|++|+++|++|.++....
T Consensus 6 ~~k~vlITGas~g---IG~~~a~~l~~~G~~v~~~~~~~ 41 (255)
T 3icc_A 6 KGKVALVTGASRG---IGRAIAKRLANDGALVAIHYGNR 41 (255)
T ss_dssp TTCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEECCCCh---HHHHHHHHHHHCCCeEEEEeCCc
Confidence 4567888866654 35789999999999998875543
No 294
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=28.46 E-value=37 Score=27.01 Aligned_cols=33 Identities=18% Similarity=0.182 Sum_probs=23.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
..+|+++-.+..| ..+++.|.+.|++|+++...
T Consensus 6 ~~~v~I~G~G~iG-----~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 6 NKQFAVIGLGRFG-----GSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CCSEEEECCSHHH-----HHHHHHHHHTTCCCEEEESC
T ss_pred CCcEEEECCCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 3467777643333 56789999999999988654
No 295
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=28.32 E-value=92 Score=27.88 Aligned_cols=34 Identities=26% Similarity=0.325 Sum_probs=24.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 5 ~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
|+++++.++.| =-..+|+.|+++|++|.++.-..
T Consensus 3 k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r~~ 36 (258)
T 3a28_C 3 KVAMVTGGAQG---IGRGISEKLAADGFDIAVADLPQ 36 (258)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHHHTCEEEEEECGG
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeCCc
Confidence 45666654432 35688999999999999886543
No 296
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=28.31 E-value=73 Score=27.96 Aligned_cols=37 Identities=16% Similarity=0.242 Sum_probs=24.3
Q ss_pred CCC-CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 1 MSR-PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 1 m~~-~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
|+. .|.++++.++ |- --..+++.|+++||+|+++...
T Consensus 1 M~~~~k~vlVtGas-gg--iG~~~a~~l~~~G~~V~~~~r~ 38 (234)
T 2ehd_A 1 MEGMKGAVLITGAS-RG--IGEATARLLHAKGYRVGLMARD 38 (234)
T ss_dssp ---CCCEEEESSTT-SH--HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCCEEEEECCC-cH--HHHHHHHHHHHCCCEEEEEECC
Confidence 552 3556666443 32 3468999999999999988754
No 297
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=28.25 E-value=43 Score=32.27 Aligned_cols=30 Identities=30% Similarity=0.383 Sum_probs=24.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEe
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVN 38 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~ 38 (524)
+||+|+-.|-.| +.+|..|+++||+|+++=
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~E 31 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRKHGIKVTIYE 31 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCCEEEEe
Confidence 588888766434 889999999999999984
No 298
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=28.24 E-value=53 Score=25.79 Aligned_cols=42 Identities=10% Similarity=0.085 Sum_probs=29.3
Q ss_pred CCEEEEEcCCCc-cCH-HHHHHHHHHHHhCC--CEEEEEeCCcChh
Q 009851 3 RPRVLVMPAPAQ-GHV-IPLLEFSQCLAKHG--FRVTFVNTDYNHK 44 (524)
Q Consensus 3 ~~~il~~~~~~~-GH~-~p~l~LA~~L~~rG--H~Vt~~~~~~~~~ 44 (524)
++|++|+-.-.. ... +-.+.+|....++| |+|.++.-.....
T Consensus 7 ~~K~~ivi~s~d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G~~v~ 52 (117)
T 2fb6_A 7 NDKLTILWTTDNKDTVFNMLAMYALNSKNRGWWKHINIILWGASVK 52 (117)
T ss_dssp TSEEEEEECCCCHHHHHHTHHHHHHHHHHHTSCSEEEEEECSHHHH
T ss_pred CCeEEEEEEcCChHHHHHHHHHHHHHHHHcCCCCcEEEEEECCeee
Confidence 467886654432 222 34677899999999 8999998876554
No 299
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=28.17 E-value=34 Score=34.41 Aligned_cols=34 Identities=18% Similarity=0.314 Sum_probs=28.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~ 39 (524)
|++++|.|+-.|..| ..+|+.|+++||+|+++..
T Consensus 3 m~~~~IgvIG~G~mG-----~~lA~~L~~~G~~V~v~dr 36 (474)
T 2iz1_A 3 MAQANFGVVGMAVMG-----KNLALNVESRGYTVAIYNR 36 (474)
T ss_dssp CTTBSEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CCCCcEEEEeeHHHH-----HHHHHHHHhCCCEEEEEcC
Confidence 777789999887776 4689999999999988754
No 300
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans}
Probab=28.14 E-value=3.1e+02 Score=26.90 Aligned_cols=34 Identities=18% Similarity=0.228 Sum_probs=24.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
..||+++.. |. -.+.+++++.+.|++|.++.+..
T Consensus 6 ~k~ILI~g~---g~--~~~~i~~a~~~~G~~vv~v~~~~ 39 (461)
T 2dzd_A 6 IRKVLVANR---GE--IAIRVFRACTELGIRTVAIYSKE 39 (461)
T ss_dssp CSEEEECSC---HH--HHHHHHHHHHHHTCEEEEEECGG
T ss_pred CcEEEEECC---cH--HHHHHHHHHHHcCCEEEEEECCc
Confidence 357887632 32 35789999999999999887654
No 301
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=28.11 E-value=37 Score=24.33 Aligned_cols=49 Identities=18% Similarity=0.104 Sum_probs=30.6
Q ss_pred HcCCceeccCcccchhhhH-Hh--hccccceeeEEecCCCCCCCHHHHHHHHHHHhc
Q 009851 403 SNGIPFLCWPYFGDQFLNE-RY--ICDFWKVGLKFDRDEGGIITREEIKNKVDQVLG 456 (524)
Q Consensus 403 ~~GvP~v~~P~~~DQ~~na-~r--v~~~lG~G~~~~~~~~~~~t~~~l~~ai~~~l~ 456 (524)
-.|+|++++--.+.|...- .. ..+. |+..-+- +..++++|.+.+++.|.
T Consensus 49 dngkplvvfvngasqndvnefqneakke-gvsydvl----kstdpeeltqrvreflk 100 (112)
T 2lnd_A 49 DNGKPLVVFVNGASQNDVNEFQNEAKKE-GVSYDVL----KSTDPEELTQRVREFLK 100 (112)
T ss_dssp TCCSCEEEEECSCCHHHHHHHHHHHHHH-TCEEEEE----ECCCHHHHHHHHHHHHH
T ss_pred hcCCeEEEEecCcccccHHHHHHHHHhc-Ccchhhh----ccCCHHHHHHHHHHHHH
Confidence 3688888877666664322 11 2222 6665553 34679999999998874
No 302
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=28.10 E-value=2.1e+02 Score=25.83 Aligned_cols=33 Identities=21% Similarity=0.258 Sum_probs=24.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~ 39 (524)
-|+++++.++.| --..+|++|+++|++|.++..
T Consensus 26 gk~~lVTGas~g---IG~aia~~la~~G~~V~~~~r 58 (271)
T 4ibo_A 26 GRTALVTGSSRG---LGRAMAEGLAVAGARILINGT 58 (271)
T ss_dssp TCEEEETTCSSH---HHHHHHHHHHHTTCEEEECCS
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 367788866543 346899999999999887654
No 303
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=27.98 E-value=2.5e+02 Score=26.09 Aligned_cols=33 Identities=12% Similarity=0.017 Sum_probs=22.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
+||+|+..+ .......++|.++||+|..+.+..
T Consensus 1 mrivf~gt~-----~fa~~~L~~L~~~~~~i~~Vvt~~ 33 (305)
T 2bln_A 1 MKTVVFAYH-----DMGCLGIEALLAAGYEISAIFTHT 33 (305)
T ss_dssp CEEEEEECH-----HHHHHHHHHHHHTTCEEEEEECCC
T ss_pred CEEEEEEcC-----HHHHHHHHHHHHCCCcEEEEEcCC
Confidence 367877543 223555678888999998777654
No 304
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=27.46 E-value=75 Score=28.85 Aligned_cols=37 Identities=14% Similarity=0.186 Sum_probs=27.5
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
|-+.|+++++.++.| =-..+|+.|+++|++|.++.-.
T Consensus 1 Ml~~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 37 (264)
T 3tfo_A 1 MVMDKVILITGASGG---IGEGIARELGVAGAKILLGARR 37 (264)
T ss_dssp CCTTCEEEESSTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCEEEEeCCccH---HHHHHHHHHHHCCCEEEEEECC
Confidence 445567888866543 3468999999999999887654
No 305
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=27.23 E-value=1.3e+02 Score=24.95 Aligned_cols=88 Identities=15% Similarity=0.060 Sum_probs=56.7
Q ss_pred CccCHHHHHHHHHHHHhC--CCEEEEEeCCcChhhHHH-hhhcCCCCCCCeEEEecCCCCCCCCCcccHHHHHHHHHHhc
Q 009851 13 AQGHVIPLLEFSQCLAKH--GFRVTFVNTDYNHKRVVE-SLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIEKCLQVM 89 (524)
Q Consensus 13 ~~GH~~p~l~LA~~L~~r--GH~Vt~~~~~~~~~~i~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (524)
.-.+-.-++.+|+.|.+. ||++ +.+......+++ . |+....+-.+.. + .
T Consensus 19 ~D~dK~~~v~~ak~~~~ll~Gf~l--~AT~gTa~~L~e~~---------Gl~v~~v~k~~e-G----------------G 70 (152)
T 1b93_A 19 HDHCKQMLMSWVERHQPLLEQHVL--YATGTTGNLISRAT---------GMNVNAMLSGPM-G----------------G 70 (152)
T ss_dssp CGGGHHHHHHHHHHTHHHHTTSEE--EEETTHHHHHHHHH---------CCCCEEECCGGG-T----------------H
T ss_pred ehhhHHHHHHHHHHHHHHhCCCEE--EEccHHHHHHHHHh---------CceeEEEEecCC-C----------------C
Confidence 446678899999999999 9954 456666677766 4 454443321110 0 2
Q ss_pred cHHHHHHHHHHhcCCCCCccEEEECCC--ch--------hHHHHHHHcCCceEEE
Q 009851 90 PGKLEELIEEINSREDEKIDCFIADGN--IG--------WSMEIAKKMNVRGAVF 134 (524)
Q Consensus 90 ~~~~~~ll~~l~~~~~~~~D~vI~D~~--~~--------~~~~~A~~lgiP~i~~ 134 (524)
++.+-++++. .+.|+||.-.- .. .-..+|-..|||++..
T Consensus 71 ~p~I~d~I~~------geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~ 119 (152)
T 1b93_A 71 DQQVGALISE------GKIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVATN 119 (152)
T ss_dssp HHHHHHHHHT------TCCCEEEEECCTTSCCTTHHHHHHHHHHHHHTTCCEESS
T ss_pred CchHHHHHHC------CCccEEEEcCCcccCCcccccHHHHHHHHHHcCCCEEeC
Confidence 2345566665 89999995432 22 2457789999999863
No 306
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=27.16 E-value=26 Score=33.78 Aligned_cols=40 Identities=10% Similarity=0.297 Sum_probs=27.8
Q ss_pred CCCCEEEEEcCCCcc-C---HHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 1 MSRPRVLVMPAPAQG-H---VIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 1 m~~~~il~~~~~~~G-H---~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
|+++||+++..+-.+ | +.....++++|.++||+|..+...
T Consensus 1 m~~~~v~vl~gg~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (364)
T 2i87_A 1 MTKENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYIT 44 (364)
T ss_dssp --CEEEEEEEECSSSCHHHHHHHHHHHHHTSCTTTEEEEEEEEC
T ss_pred CCCcEEEEEECCCCccchhHHHHHHHHHHHHhhcCCEEEEEEEc
Confidence 788899988754322 2 234577899999999999988754
No 307
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=27.02 E-value=32 Score=29.88 Aligned_cols=32 Identities=9% Similarity=0.105 Sum_probs=26.4
Q ss_pred CCCcceEEecCChhhHHHHHHcCCceeccCccc
Q 009851 383 HPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFG 415 (524)
Q Consensus 383 ~~~v~~~ItHgG~gs~~Eal~~GvP~v~~P~~~ 415 (524)
...++.+|+.||........ -++|+|-+|..+
T Consensus 49 ~~~~dVIISRGgta~~lr~~-~~iPVV~I~~s~ 80 (196)
T 2q5c_A 49 QDEVDAIISRGATSDYIKKS-VSIPSISIKVTR 80 (196)
T ss_dssp TTTCSEEEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred cCCCeEEEECChHHHHHHHh-CCCCEEEEcCCH
Confidence 45666799999999888875 589999999864
No 308
>3giu_A Pyrrolidone-carboxylate peptidase; IDP00836, hydrolase, PROT thiol protease, structural genomics; HET: MSE PG4; 1.25A {Staphylococcus aureus subsp} SCOP: c.56.4.0
Probab=27.02 E-value=85 Score=27.70 Aligned_cols=29 Identities=17% Similarity=0.119 Sum_probs=19.3
Q ss_pred CCCCEEEEEcCCCc-c-CHHHHHHHHHHHHh
Q 009851 1 MSRPRVLVMPAPAQ-G-HVIPLLEFSQCLAK 29 (524)
Q Consensus 1 m~~~~il~~~~~~~-G-H~~p~l~LA~~L~~ 29 (524)
|+++||++.-|+-. | -+||...++++|.+
T Consensus 1 ~~~m~VLvTGF~PF~~~~~NPS~~~v~~L~~ 31 (215)
T 3giu_A 1 SNAMHILVTGFAPFDNQNINPSWEAVTQLED 31 (215)
T ss_dssp ---CEEEEEEECCCTTCSCCHHHHHHHHSCS
T ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHhcc
Confidence 45678886654433 2 57999999999976
No 309
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=26.97 E-value=43 Score=31.16 Aligned_cols=32 Identities=25% Similarity=0.321 Sum_probs=26.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
.||.|+-.|..|+ .+|..|+++||+|+++...
T Consensus 16 ~~I~VIG~G~mG~-----~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGA-----GIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCHHHH-----HHHHHHHhCCCeEEEEECC
Confidence 5788998887775 5899999999999987654
No 310
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=26.71 E-value=2.9e+02 Score=23.30 Aligned_cols=138 Identities=16% Similarity=0.140 Sum_probs=77.8
Q ss_pred ceEEEeecCCCCCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeeEEeccChhhhhcCCCcceE
Q 009851 310 SVVYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACF 389 (524)
Q Consensus 310 ~vV~vs~GS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~vpq~~lL~~~~v~~~ 389 (524)
+.|-|-+||.+ +....++..+.++..+..+-..+-.- ...|+.+.+ ++-... -...+| |
T Consensus 8 ~~V~IimgS~S--D~~v~~~a~~~L~~~gi~~ev~V~Sa------HR~p~~~~~----------~~~~a~-~~g~~V--i 66 (174)
T 3lp6_A 8 PRVGVIMGSDS--DWPVMADAAAALAEFDIPAEVRVVSA------HRTPEAMFS----------YARGAA-ARGLEV--I 66 (174)
T ss_dssp CSEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTCHHHHHH----------HHHHHH-HHTCCE--E
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEECC------CCCHHHHHH----------HHHHHH-hCCCCE--E
Confidence 35666678754 66778888899998998866555432 344444321 111110 012333 7
Q ss_pred EecCChh----hHHHHHHcCCceeccCcccchh------hhHHhhccccceeeEE-ecCCCCCCCHHHHHHHHHHHhcCH
Q 009851 390 LSHCGWN----STMEGVSNGIPFLCWPYFGDQF------LNERYICDFWKVGLKF-DRDEGGIITREEIKNKVDQVLGNQ 458 (524)
Q Consensus 390 ItHgG~g----s~~Eal~~GvP~v~~P~~~DQ~------~na~rv~~~lG~G~~~-~~~~~~~~t~~~l~~ai~~~l~~~ 458 (524)
|.=.|.. ++..++ .-+|+|.+|...-.. .-.-.+-. |+.+.. ..+ ...++.-+...|-. +.|+
T Consensus 67 Ia~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlS~vqmp~--GvpVatV~I~--~~~nAa~lAa~Il~-~~d~ 140 (174)
T 3lp6_A 67 IAGAGGAAHLPGMVAAA-TPLPVIGVPVPLGRLDGLDSLLSIVQMPA--GVPVATVSIG--GAGNAGLLAVRMLG-AANP 140 (174)
T ss_dssp EEEEESSCCHHHHHHHH-CSSCEEEEEECCSSGGGHHHHHHHHCCCT--TCCCEECCTT--CHHHHHHHHHHHHH-TTCH
T ss_pred EEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhhCCC--CCeeEEEEcC--cchHHHHHHHHHHh-CCCH
Confidence 7666532 444443 669999999863221 11122332 543322 221 23455555555533 4689
Q ss_pred HHHHHHHHHHHHHHhh
Q 009851 459 DFKARALELKEKAMSS 474 (524)
Q Consensus 459 ~~r~~a~~l~~~~~~~ 474 (524)
.++++.+..+++.++.
T Consensus 141 ~l~~kl~~~r~~~~~~ 156 (174)
T 3lp6_A 141 QLRARIVAFQDRLADV 156 (174)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999888874
No 311
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=26.70 E-value=61 Score=30.26 Aligned_cols=41 Identities=12% Similarity=0.075 Sum_probs=30.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcC-hhhHHHh
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYN-HKRVVES 49 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~-~~~i~~~ 49 (524)
++||+|+-.|+.|- .+|..|+ .||+|+++..... .+.+++.
T Consensus 2 ~mkI~IiGaGa~G~-----~~a~~L~-~g~~V~~~~r~~~~~~~l~~~ 43 (307)
T 3ego_A 2 SLKIGIIGGGSVGL-----LCAYYLS-LYHDVTVVTRRQEQAAAIQSE 43 (307)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHH-TTSEEEEECSCHHHHHHHHHH
T ss_pred CCEEEEECCCHHHH-----HHHHHHh-cCCceEEEECCHHHHHHHHhC
Confidence 36899998887774 6788899 9999999987653 3455543
No 312
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=26.69 E-value=1.1e+02 Score=32.59 Aligned_cols=110 Identities=8% Similarity=0.045 Sum_probs=71.6
Q ss_pred eccChhhhhcCCCcceEEecCChhhHHHHHHcCCceeccCcccchhhhHHhhccccceeeEEecCC----CCCCCHHHHH
Q 009851 373 SWAPQLRVLNHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDE----GGIITREEIK 448 (524)
Q Consensus 373 ~~vpq~~lL~~~~v~~~ItHgG~gs~~Eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~~~~~~----~~~~t~~~l~ 448 (524)
++.+-.++|..+++ +||=- .+.+.|.+..++|+|....-.|+..... + | ...+..+ ...-+.++|.
T Consensus 605 ~~~di~~ll~~aD~--lITDy-SSv~fD~~~l~kPiif~~~D~~~Y~~~~----r-g--~y~d~~~~~pg~~~~~~~eL~ 674 (729)
T 3l7i_A 605 NYNDVSELFLISDC--LITDY-SSVMFDYGILKRPQFFFAYDIDKYDKGL----R-G--FYMNYMEDLPGPIYTEPYGLA 674 (729)
T ss_dssp TCSCHHHHHHTCSE--EEESS-CTHHHHHGGGCCCEEEECTTTTTTTSSC----C-S--BSSCTTSSSSSCEESSHHHHH
T ss_pred CCcCHHHHHHHhCE--EEeec-hHHHHhHHhhCCCEEEecCCHHHHhhcc----C-C--cccChhHhCCCCeECCHHHHH
Confidence 45566789966666 99975 4678999999999998877766653311 1 2 2222110 1125789999
Q ss_pred HHHHHHhcC-HHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHHhh
Q 009851 449 NKVDQVLGN-QDFKARALELKEKAMSSVREGGSSYKTFQNFLQWTMNALK 497 (524)
Q Consensus 449 ~ai~~~l~~-~~~r~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~i~~~~~ 497 (524)
++|.....+ ..|+++.+++.+++-.. ++|. +-+++++.|.....
T Consensus 675 ~~i~~~~~~~~~~~~~~~~~~~~~~~~--~dg~---as~ri~~~i~~~~~ 719 (729)
T 3l7i_A 675 KELKNLDKVQQQYQEKIDAFYDRFCSV--DNGK---ASQYIGDLIHKDIK 719 (729)
T ss_dssp HHHTTHHHHHHHTHHHHHHHHHHHSTT--CCSC---HHHHHHHHHHHHHH
T ss_pred HHHhhhhccchhHHHHHHHHHHHhCCc--cCCh---HHHHHHHHHHhcCc
Confidence 999888753 57888888888887643 3442 34555555555544
No 313
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=26.69 E-value=3.2e+02 Score=23.75 Aligned_cols=107 Identities=15% Similarity=0.114 Sum_probs=53.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCcChhhHHHhhhcCCCCCCCeEEEecCCCCCCCCCcccHHHH
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKL 81 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~r--GH~Vt~~~~~~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 81 (524)
+||+++..+..+-+. .|.+.+.+. +|+|..+.+........+.. ...++.+..++...-. +-
T Consensus 1 ~riaVl~SG~Gs~L~---aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A-----~~~gIp~~~~~~~~~~-----~r--- 64 (209)
T 1meo_A 1 ARVAVLISGTGSNLQ---ALIDSTREPNSSAQIDIVISNKAAVAGLDKA-----ERAGIPTRVINHKLYK-----NR--- 64 (209)
T ss_dssp CEEEEEESSSCTTHH---HHHHHHHSTTCSCEEEEEEESSTTCHHHHHH-----HHTTCCEEECCGGGSS-----SH---
T ss_pred CeEEEEEECCchHHH---HHHHHHhcCCCCcEEEEEEeCCCChHHHHHH-----HHcCCCEEEECccccC-----ch---
Confidence 378877766665444 344555544 79988777654322211100 0136666654421100 00
Q ss_pred HHHHHHhccHHHHHHHHHHhcCCCCCccEEEECCCch-hHHHHHHHcCCceEEEccc
Q 009851 82 IEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG-WSMEIAKKMNVRGAVFWPS 137 (524)
Q Consensus 82 ~~~~~~~~~~~~~~ll~~l~~~~~~~~D~vI~D~~~~-~~~~~A~~lgiP~i~~~~~ 137 (524)
....+.+.+.++. .++|+||+-.+.. -...+-+...-.++-+.++
T Consensus 65 -----~~~~~~~~~~l~~------~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 110 (209)
T 1meo_A 65 -----VEFDSAIDLVLEE------FSIDIVCLAGFMRILSGPFVQKWNGKMLNIHPS 110 (209)
T ss_dssp -----HHHHHHHHHHHHH------TTCCEEEEESCCSCCCHHHHHHTTTSEEEEESS
T ss_pred -----hhhhHHHHHHHHh------cCCCEEEEcchhhhCCHHHHhhhcCCEEEEccC
Confidence 0111223344444 7899999765532 3344445555566766554
No 314
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=26.59 E-value=44 Score=31.60 Aligned_cols=34 Identities=24% Similarity=0.421 Sum_probs=26.4
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
+..||.|+-.|..| ..+|..|+++||+|++.-..
T Consensus 5 ~~~kI~vIGaG~MG-----~~iA~~la~~G~~V~l~d~~ 38 (319)
T 2dpo_A 5 AAGDVLIVGSGLVG-----RSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSC
T ss_pred CCceEEEEeeCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 34688899877666 47899999999999997654
No 315
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=26.56 E-value=42 Score=30.89 Aligned_cols=38 Identities=21% Similarity=0.239 Sum_probs=24.4
Q ss_pred CCC-CEEEEEcCCCccCHHHHHHHHHHHHhCC-CEEEEEeCCcC
Q 009851 1 MSR-PRVLVMPAPAQGHVIPLLEFSQCLAKHG-FRVTFVNTDYN 42 (524)
Q Consensus 1 m~~-~~il~~~~~~~GH~~p~l~LA~~L~~rG-H~Vt~~~~~~~ 42 (524)
|+. ++|+ ++ |+.|.+ -..++++|.++| |+|+.++-...
T Consensus 2 M~~~~~il-Vt-GatG~i--G~~l~~~L~~~g~~~V~~~~R~~~ 41 (299)
T 2wm3_A 2 MVDKKLVV-VF-GGTGAQ--GGSVARTLLEDGTFKVRVVTRNPR 41 (299)
T ss_dssp --CCCEEE-EE-TTTSHH--HHHHHHHHHHHCSSEEEEEESCTT
T ss_pred CCCCCEEE-EE-CCCchH--HHHHHHHHHhcCCceEEEEEcCCC
Confidence 553 4444 44 444544 457889999999 99999986543
No 316
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=26.43 E-value=58 Score=29.21 Aligned_cols=33 Identities=24% Similarity=0.314 Sum_probs=26.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
..||.|+-.|..| ..||+.|++.||+|++....
T Consensus 19 ~~kIgiIG~G~mG-----~alA~~L~~~G~~V~~~~r~ 51 (245)
T 3dtt_A 19 GMKIAVLGTGTVG-----RTMAGALADLGHEVTIGTRD 51 (245)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESC
T ss_pred CCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 5788888766555 46799999999999988654
No 317
>1ulz_A Pyruvate carboxylase N-terminal domain; biotin carboxylase; 2.20A {Aquifex aeolicus} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=26.39 E-value=2e+02 Score=28.26 Aligned_cols=33 Identities=15% Similarity=0.199 Sum_probs=24.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
.||+++.. | .-.+.+++++.+.|++|.++.+..
T Consensus 3 k~ilI~g~---g--~~~~~~~~a~~~~G~~vv~v~~~~ 35 (451)
T 1ulz_A 3 NKVLVANR---G--EIAVRIIRACKELGIPTVAIYNEV 35 (451)
T ss_dssp SSEEECCC---H--HHHHHHHHHHHHHTCCEEEEECGG
T ss_pred ceEEEECC---c--HHHHHHHHHHHHcCCeEEEEechh
Confidence 45776642 2 245789999999999999887643
No 318
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=26.32 E-value=1.1e+02 Score=24.90 Aligned_cols=40 Identities=23% Similarity=0.304 Sum_probs=27.6
Q ss_pred CEEE-EEcCCCccCH--HHHHHHHHHHHhCCCEE-EEEeCCcCh
Q 009851 4 PRVL-VMPAPAQGHV--IPLLEFSQCLAKHGFRV-TFVNTDYNH 43 (524)
Q Consensus 4 ~~il-~~~~~~~GH~--~p~l~LA~~L~~rGH~V-t~~~~~~~~ 43 (524)
+|++ +++.+-+|+- .-.+.+|+.+.+.||+| +++-.....
T Consensus 13 ~~~~ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~~VFf~~DGV 56 (140)
T 2d1p_A 13 MRFAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFYREGV 56 (140)
T ss_dssp CEEEEEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEEECGGGG
T ss_pred eEEEEEEcCCCCCcHHHHHHHHHHHHHHHCCCccCEEEEechHH
Confidence 5666 5555555554 44477899999999999 777665433
No 319
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=26.21 E-value=69 Score=24.93 Aligned_cols=61 Identities=10% Similarity=0.043 Sum_probs=41.7
Q ss_pred CCcceEEecCChhh---------HHHHHHcCCceeccCcccchhhhHHhhccccceeeEEecCCCCCCCHHHHHHHHHHH
Q 009851 384 PSIACFLSHCGWNS---------TMEGVSNGIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQV 454 (524)
Q Consensus 384 ~~v~~~ItHgG~gs---------~~Eal~~GvP~v~~P~~~DQ~~na~rv~~~lG~G~~~~~~~~~~~t~~~l~~ai~~~ 454 (524)
++| +|--+|..| +..|...|+|+|++=..+.+. .-..+++ .|..+ -.++.+.|.++|+..
T Consensus 39 ~~~--vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~-~P~~l~~---~a~~i-----V~Wn~~~I~~aI~~~ 107 (111)
T 1eiw_A 39 ADA--VIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLEN-VPPELEA---VSSEV-----VGWNPHCIRDALEDA 107 (111)
T ss_dssp CSE--EEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSC-CCTTHHH---HCSEE-----ECSCHHHHHHHHHHH
T ss_pred CCE--EEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCc-CCHHHHh---hCcee-----ccCCHHHHHHHHHhc
Confidence 455 898999888 667888999999876666541 1112332 22222 138999999999987
Q ss_pred h
Q 009851 455 L 455 (524)
Q Consensus 455 l 455 (524)
+
T Consensus 108 ~ 108 (111)
T 1eiw_A 108 L 108 (111)
T ss_dssp H
T ss_pred c
Confidence 6
No 320
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=26.15 E-value=80 Score=28.25 Aligned_cols=30 Identities=7% Similarity=-0.140 Sum_probs=23.4
Q ss_pred CCccEEEECCCchh-------HHHHHHHcCCceEEEc
Q 009851 106 EKIDCFIADGNIGW-------SMEIAKKMNVRGAVFW 135 (524)
Q Consensus 106 ~~~D~vI~D~~~~~-------~~~~A~~lgiP~i~~~ 135 (524)
.+||++++|.+... +..+.-.+|+|.|.+.
T Consensus 106 ~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVA 142 (237)
T 3goc_A 106 CPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGVA 142 (237)
T ss_dssp SCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEEE
T ss_pred CCCCEEEEeCceeecCCCcchhheeeeecCCCEEeee
Confidence 58999999987552 5566677789999875
No 321
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=26.07 E-value=77 Score=30.64 Aligned_cols=35 Identities=20% Similarity=0.322 Sum_probs=27.8
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
|++.+|+++-.|. .-+..|..|+++||+|+++-..
T Consensus 1 m~~~~v~iiG~G~-----~Gl~~A~~l~~~g~~v~v~E~~ 35 (384)
T 2bi7_A 1 MKSKKILIVGAGF-----SGAVIGRQLAEKGHQVHIIDQR 35 (384)
T ss_dssp -CCCEEEEECCSH-----HHHHHHHHHHTTTCEEEEEESS
T ss_pred CCcCCEEEECcCH-----HHHHHHHHHHHCCCcEEEEEec
Confidence 7778888887553 4678899999999999999764
No 322
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=26.01 E-value=63 Score=30.24 Aligned_cols=37 Identities=22% Similarity=0.253 Sum_probs=24.4
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
|+.++|++. |+.|.+ -..|+++|+++||+|+.+.-..
T Consensus 1 m~~~~vlVt--GatG~i--G~~l~~~L~~~G~~V~~~~r~~ 37 (345)
T 2z1m_A 1 MSGKRALIT--GIRGQD--GAYLAKLLLEKGYEVYGADRRS 37 (345)
T ss_dssp --CCEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEECSCC
T ss_pred CCCCEEEEE--CCCChH--HHHHHHHHHHCCCEEEEEECCC
Confidence 665666554 333433 3678999999999999987543
No 323
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=25.95 E-value=88 Score=24.41 Aligned_cols=36 Identities=8% Similarity=-0.054 Sum_probs=26.6
Q ss_pred EEcCCCccCH--HHHHHHHHHHHhCCCEEEEEeCCcCh
Q 009851 8 VMPAPAQGHV--IPLLEFSQCLAKHGFRVTFVNTDYNH 43 (524)
Q Consensus 8 ~~~~~~~GH~--~p~l~LA~~L~~rGH~Vt~~~~~~~~ 43 (524)
++..+-+|+- .-.+.+|..+.+.||+|.++-...-.
T Consensus 7 vv~~~P~g~~~~~~al~~a~a~~a~~~~v~vff~~DGV 44 (119)
T 2d1p_B 7 VFSTAPHGTAAGREGLDALLATSALTDDLAVFFIADGV 44 (119)
T ss_dssp EECSCTTTSTHHHHHHHHHHHHHTTCSCEEEEECGGGG
T ss_pred EEcCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEehHHH
Confidence 5555555655 66788999999999999988776443
No 324
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=25.95 E-value=1.6e+02 Score=28.98 Aligned_cols=33 Identities=12% Similarity=0.216 Sum_probs=24.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
+||+++. .| .....+++++.+.|++|.++.+..
T Consensus 2 k~ilI~g---~g--~~~~~i~~a~~~~G~~vv~v~~~~ 34 (451)
T 2vpq_A 2 KKVLIAN---RG--EIAVRIIRACRDLGIQTVAIYSEG 34 (451)
T ss_dssp CEEEECC---CH--HHHHHHHHHHHHTTCEEEEEEEGG
T ss_pred ceEEEeC---CC--HHHHHHHHHHHHcCCEEEEEeccc
Confidence 3566654 23 356789999999999999887643
No 325
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=25.87 E-value=88 Score=29.58 Aligned_cols=63 Identities=6% Similarity=0.086 Sum_probs=42.7
Q ss_pred CCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeeEEeccChhhhhcCCCcceEEecCChhhHHHH
Q 009851 322 LDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEG 401 (524)
Q Consensus 322 ~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~vpq~~lL~~~~v~~~ItHgG~gs~~Ea 401 (524)
.+.+..+.+-+++.....+.||...++.+. .++.++++...+-++|+. ||=+.-..++.-+
T Consensus 62 td~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~-----------------~rlL~~LD~~~i~~~PK~--~~GySDiT~L~~a 122 (327)
T 4h1h_A 62 SIRSRVADIHEAFNDSSVKAILTVIGGFNS-----------------NQLLPYLDYDLISENPKI--LCGFSDITALATA 122 (327)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCSCG-----------------GGGGGGCCHHHHHHSCCE--EEECTTHHHHHHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEcCCchhH-----------------HHHhhhcchhhhccCCeE--EEecccccHHHHH
Confidence 345566779999999999999998776221 124455555666666666 7777666666666
Q ss_pred HH
Q 009851 402 VS 403 (524)
Q Consensus 402 l~ 403 (524)
++
T Consensus 123 l~ 124 (327)
T 4h1h_A 123 IY 124 (327)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 326
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=25.87 E-value=85 Score=28.83 Aligned_cols=39 Identities=10% Similarity=0.076 Sum_probs=27.5
Q ss_pred CCCEEEEEcCCCc-cCHH---HHHHHHHHHHhCCCEEEEEeCC
Q 009851 2 SRPRVLVMPAPAQ-GHVI---PLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 2 ~~~~il~~~~~~~-GH~~---p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
-++||+++..+.. -|-. ....++++|.++||+|.++...
T Consensus 1 m~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~ 43 (306)
T 1iow_A 1 MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPK 43 (306)
T ss_dssp CCCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CCcEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecC
Confidence 0467888875432 2222 4468999999999999998875
No 327
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A
Probab=25.85 E-value=1.4e+02 Score=29.62 Aligned_cols=41 Identities=17% Similarity=0.308 Sum_probs=33.5
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHh-CCCEEEEEeCCcChhhH
Q 009851 6 VLVMPAPAQGHVIPLLEFSQCLAK-HGFRVTFVNTDYNHKRV 46 (524)
Q Consensus 6 il~~~~~~~GH~~p~l~LA~~L~~-rGH~Vt~~~~~~~~~~i 46 (524)
+++...++.|-..-++.+|..++. .|..|.+++.......+
T Consensus 206 iiI~G~pG~GKTtl~l~ia~~~~~~~g~~Vl~~s~E~s~~~l 247 (454)
T 2r6a_A 206 IIVAARPSVGKTAFALNIAQNVATKTNENVAIFSLEMSAQQL 247 (454)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHHHHSSCCEEEEESSSCHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHhCCCcEEEEECCCCHHHH
Confidence 557777899999999999999986 68999999987665443
No 328
>2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ...
Probab=25.79 E-value=1.6e+02 Score=28.93 Aligned_cols=32 Identities=13% Similarity=0.264 Sum_probs=23.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
.||+++.. | .....+++++.+.|++|.++.+.
T Consensus 3 k~ilI~g~---g--~~~~~~~~a~~~~G~~vv~v~~~ 34 (449)
T 2w70_A 3 DKIVIANR---G--EIALRILRACKELGIKTVAVHSS 34 (449)
T ss_dssp SEEEECCC---H--HHHHHHHHHHHHHTCEEEEEEEG
T ss_pred ceEEEeCC---c--HHHHHHHHHHHHcCCeEEEEecc
Confidence 46777652 3 34668999999999999988653
No 329
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=25.64 E-value=63 Score=30.29 Aligned_cols=34 Identities=21% Similarity=0.355 Sum_probs=26.8
Q ss_pred CEEEEEcCCCc--cCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 4 PRVLVMPAPAQ--GHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 4 ~~il~~~~~~~--GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
.+|++++.++- |+ -+.+|+.|+++|++|+++...
T Consensus 133 ~~vlVlcG~GNNGGD---Glv~AR~L~~~G~~V~V~~~~ 168 (306)
T 3d3j_A 133 PTVALLCGPHVKGAQ---GISCGRHLANHDVQVILFLPN 168 (306)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCEEEEECCC
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCcEEEEEec
Confidence 47888886653 44 378999999999999998654
No 330
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=25.52 E-value=52 Score=32.81 Aligned_cols=34 Identities=32% Similarity=0.440 Sum_probs=26.4
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
|+ +||.|+-.|..| ..+|..|+++||+|+++...
T Consensus 1 M~-mkI~VIG~G~vG-----~~lA~~La~~G~~V~~~D~~ 34 (450)
T 3gg2_A 1 MS-LDIAVVGIGYVG-----LVSATCFAELGANVRCIDTD 34 (450)
T ss_dssp -C-CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CC-CEEEEECcCHHH-----HHHHHHHHhcCCEEEEEECC
Confidence 53 689988766555 57899999999999987654
No 331
>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A
Probab=25.30 E-value=2.4e+02 Score=27.87 Aligned_cols=36 Identities=22% Similarity=0.313 Sum_probs=26.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcC
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYN 42 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~ 42 (524)
-|+++++.++.| =-..+|+.|+++|++|.++.-...
T Consensus 213 gk~~LVTGgsgG---IG~aiA~~La~~Ga~Vvl~~r~~~ 248 (454)
T 3u0b_A 213 GKVAVVTGAARG---IGATIAEVFARDGATVVAIDVDGA 248 (454)
T ss_dssp TCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEECGGG
T ss_pred CCEEEEeCCchH---HHHHHHHHHHHCCCEEEEEeCCcc
Confidence 367778866543 246899999999999988765433
No 332
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=25.24 E-value=77 Score=28.79 Aligned_cols=38 Identities=16% Similarity=0.113 Sum_probs=26.0
Q ss_pred CC-CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 1 MS-RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 1 m~-~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
|+ +.|.++++.++.| --..+|++|+++|++|.++....
T Consensus 1 M~~~~k~vlVTGas~g---IG~~~a~~l~~~G~~V~~~~r~~ 39 (281)
T 3m1a_A 1 MSESAKVWLVTGASSG---FGRAIAEAAVAAGDTVIGTARRT 39 (281)
T ss_dssp ---CCCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCCCCcEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeCCH
Confidence 54 3467777755432 34588999999999998877543
No 333
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=25.21 E-value=63 Score=29.48 Aligned_cols=33 Identities=12% Similarity=0.261 Sum_probs=24.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 5 ~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
|.++++.++.| + -..+|+.|+++|++|.++.-.
T Consensus 22 k~vlVTGas~g-I--G~aia~~La~~G~~V~~~~r~ 54 (272)
T 2nwq_A 22 STLFITGATSG-F--GEACARRFAEAGWSLVLTGRR 54 (272)
T ss_dssp CEEEESSTTTS-S--HHHHHHHHHHTTCEEEEEESC
T ss_pred cEEEEeCCCCH-H--HHHHHHHHHHCCCEEEEEECC
Confidence 56777755543 2 467999999999999987654
No 334
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=25.02 E-value=95 Score=25.06 Aligned_cols=96 Identities=14% Similarity=0.095 Sum_probs=61.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCcChhhHHH-hhhcCCCCCCCeEEEecCCCCCCCCCcccHHH
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDYNHKRVVE-SLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGK 80 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~r--GH~Vt~~~~~~~~~~i~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 80 (524)
++|.+.. .-.+-.-++.+|+.|.+. ||+ ++.+......+++ . |+....+-.+..
T Consensus 4 ~~ialsv--~D~dK~~~v~~a~~~~~ll~Gf~--l~AT~gTa~~L~e~~---------Gl~v~~v~k~~~---------- 60 (134)
T 2xw6_A 4 RALALIA--HDAKKEEMVAFCQRHREVLARFP--LVATGTTGRRIEEAT---------GLTVEKLLSGPL---------- 60 (134)
T ss_dssp CEEEEEE--CGGGHHHHHHHHHHTHHHHTTSC--EEECHHHHHHHHHHH---------CCCCEECSCGGG----------
T ss_pred cEEEEEE--ecccHHHHHHHHHHHHHHhCCCE--EEEccHHHHHHHHhh---------CceEEEEEecCC----------
Confidence 4555554 346667789999999999 994 5567677777766 4 554444321110
Q ss_pred HHHHHHHhccHHHHHHHHHHhcCCCCCccEEEECCC--c--------hhHHHHHHHcCCceEEEc
Q 009851 81 LIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGN--I--------GWSMEIAKKMNVRGAVFW 135 (524)
Q Consensus 81 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~D~vI~D~~--~--------~~~~~~A~~lgiP~i~~~ 135 (524)
..++.+-++++. .+.|+||.-.- . ..-..+|-..|||++...
T Consensus 61 -------eG~p~I~d~I~~------geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~l 112 (134)
T 2xw6_A 61 -------GGDQQMGARVAE------GRILAVIFFRDPLTAQPHEPDVQALLRVCDVHGVPLATNP 112 (134)
T ss_dssp -------THHHHHHHHHHT------TCEEEEEEECCTTTCCTTSCCSHHHHHHHHHHTCCEECSH
T ss_pred -------CCcchHHHHHHC------CCccEEEEccCcccCCCccchHHHHHHHHHHcCCCeEcCH
Confidence 022345556665 89999995332 1 135678899999998743
No 335
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=25.01 E-value=45 Score=32.91 Aligned_cols=35 Identities=17% Similarity=0.313 Sum_probs=23.5
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCC--CEEEEEeCCc
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHG--FRVTFVNTDY 41 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rG--H~Vt~~~~~~ 41 (524)
|+| ||+++-.+..| +..|+.|+++| ++||++....
T Consensus 1 M~K-~VvIIGgG~aG-----l~aA~~L~~~~~~~~VtlI~~~~ 37 (430)
T 3hyw_A 1 MAK-HVVVIGGGVGG-----IATAYNLRNLMPDLKITLISDRP 37 (430)
T ss_dssp -CC-EEEEECSSHHH-----HHHHHHHHHHCTTCEEEEECSSS
T ss_pred CCC-cEEEECCCHHH-----HHHHHHHhccCcCCeEEEEcCCC
Confidence 764 78888654333 45677777654 9999998764
No 336
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=24.99 E-value=56 Score=30.90 Aligned_cols=33 Identities=27% Similarity=0.325 Sum_probs=27.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
.+||.|+-.|..| ..+|..|++.||+|+++...
T Consensus 14 ~~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWG-----TVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 3688998887776 57899999999999998764
No 337
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=24.90 E-value=78 Score=29.59 Aligned_cols=37 Identities=19% Similarity=0.258 Sum_probs=24.6
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
|++.+.++++ |+.|-+ -..|++.|+++||+|+.+.-.
T Consensus 2 M~~~~~vlVT-GatG~i--G~~l~~~L~~~G~~V~~~~r~ 38 (341)
T 3enk_A 2 MSTKGTILVT-GGAGYI--GSHTAVELLAHGYDVVIADNL 38 (341)
T ss_dssp CCSSCEEEEE-TTTSHH--HHHHHHHHHHTTCEEEEECCC
T ss_pred CCCCcEEEEe-cCCcHH--HHHHHHHHHHCCCcEEEEecC
Confidence 5544344555 333433 357899999999999988653
No 338
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=24.87 E-value=57 Score=25.09 Aligned_cols=33 Identities=6% Similarity=-0.002 Sum_probs=25.4
Q ss_pred ccCHHHHHHHHHHHHhC-CC-EEEEEeCCcChhhH
Q 009851 14 QGHVIPLLEFSQCLAKH-GF-RVTFVNTDYNHKRV 46 (524)
Q Consensus 14 ~GH~~p~l~LA~~L~~r-GH-~Vt~~~~~~~~~~i 46 (524)
.......+.+|..+++. || +|+++-...-....
T Consensus 15 ~~~~~~al~~a~~~~~~~g~~~v~vff~~dgV~~~ 49 (117)
T 1jx7_A 15 SESLFNSLRLAIALREQESNLDLRLFLMSDAVTAG 49 (117)
T ss_dssp CSHHHHHHHHHHHHHHHCTTCEEEEEECGGGGGGG
T ss_pred cHHHHHHHHHHHHHHhcCCCccEEEEEEchHHHHH
Confidence 35567789999999999 99 99998876554443
No 339
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=24.85 E-value=77 Score=27.85 Aligned_cols=34 Identities=18% Similarity=0.340 Sum_probs=25.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
.|.++++.++.| --..+|++|+++|++|.++.-.
T Consensus 2 ~k~vlITGas~g---IG~~ia~~l~~~G~~V~~~~r~ 35 (235)
T 3l77_A 2 MKVAVITGASRG---IGEAIARALARDGYALALGARS 35 (235)
T ss_dssp CCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 356677755443 3568999999999999887754
No 340
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=24.85 E-value=27 Score=33.61 Aligned_cols=31 Identities=19% Similarity=0.238 Sum_probs=25.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 5 ~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
||.|+-.|..| ..+|..|+++||+|+++...
T Consensus 17 kI~iIG~G~mG-----~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFG-----TALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHH-----HHHHHHHTTTEEEEEEECSC
T ss_pred eEEEECCCHHH-----HHHHHHHHhCCCEEEEEECC
Confidence 89998887666 46799999999999998654
No 341
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=24.85 E-value=83 Score=27.98 Aligned_cols=34 Identities=18% Similarity=0.264 Sum_probs=24.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
.|.++++.++.| =-..+|+.|+++|++|+++.-.
T Consensus 5 ~k~vlVTGas~g---iG~~ia~~l~~~G~~V~~~~r~ 38 (245)
T 1uls_A 5 DKAVLITGAAHG---IGRATLELFAKEGARLVACDIE 38 (245)
T ss_dssp TCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 356667655442 3567899999999999988654
No 342
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=24.77 E-value=37 Score=31.59 Aligned_cols=33 Identities=9% Similarity=0.033 Sum_probs=27.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
+.||.|+-.|..|. .+|+.|+++||+|+++...
T Consensus 15 ~~~I~vIG~G~mG~-----~~A~~l~~~G~~V~~~dr~ 47 (296)
T 3qha_A 15 QLKLGYIGLGNMGA-----PMATRMTEWPGGVTVYDIR 47 (296)
T ss_dssp CCCEEEECCSTTHH-----HHHHHHTTSTTCEEEECSS
T ss_pred CCeEEEECcCHHHH-----HHHHHHHHCCCeEEEEeCC
Confidence 45899998887774 6899999999999988654
No 343
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=24.74 E-value=85 Score=28.23 Aligned_cols=34 Identities=24% Similarity=0.306 Sum_probs=25.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
-|.++++.++.| --..+|++|+++|++|.++...
T Consensus 29 ~k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r~ 62 (262)
T 3rkr_A 29 GQVAVVTGASRG---IGAAIARKLGSLGARVVLTARD 62 (262)
T ss_dssp TCEEEESSTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEECC
Confidence 367777765543 4578899999999999887654
No 344
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=24.71 E-value=63 Score=30.19 Aligned_cols=33 Identities=30% Similarity=0.284 Sum_probs=26.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
.+||.|+-.|..| ..+|+.|++.||+|++....
T Consensus 21 m~~I~iIG~G~mG-----~~~A~~l~~~G~~V~~~dr~ 53 (310)
T 3doj_A 21 MMEVGFLGLGIMG-----KAMSMNLLKNGFKVTVWNRT 53 (310)
T ss_dssp SCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECccHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 4688888777655 57899999999999987543
No 345
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=24.55 E-value=32 Score=31.64 Aligned_cols=52 Identities=12% Similarity=-0.020 Sum_probs=36.4
Q ss_pred cceEEecCChhhHHHHHHc------CCceeccCcccchhhhHHhhccccceeeEEecCCCCCCCHHHHHHHHHHHhcC
Q 009851 386 IACFLSHCGWNSTMEGVSN------GIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGN 457 (524)
Q Consensus 386 v~~~ItHgG~gs~~Eal~~------GvP~v~~P~~~DQ~~na~rv~~~lG~G~~~~~~~~~~~t~~~l~~ai~~~l~~ 457 (524)
++++|.=||-||+.+++.. ++|++.+|.- . +|.- ..+.++++.++++.++..
T Consensus 36 ~D~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G-----------~-lgfl--------~~~~~~~~~~~l~~l~~g 93 (272)
T 2i2c_A 36 PEIVISIGGDGTFLSAFHQYEERLDEIAFIGIHTG-----------H-LGFY--------ADWRPAEADKLVKLLAKG 93 (272)
T ss_dssp CSEEEEEESHHHHHHHHHHTGGGTTTCEEEEEESS-----------S-CCSS--------CCBCGGGHHHHHHHHHTT
T ss_pred CCEEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCC-----------C-CCcC--------CcCCHHHHHHHHHHHHcC
Confidence 4459999999999999875 8898888751 1 2321 124567788888887753
No 346
>2j37_W Signal recognition particle 54 kDa protein (SRP54); ribosome, SRP, translation/RNA; 8.00A {Canis SP} PDB: 1wgw_A
Probab=24.54 E-value=1.9e+02 Score=29.20 Aligned_cols=40 Identities=8% Similarity=0.233 Sum_probs=34.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcChh
Q 009851 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHK 44 (524)
Q Consensus 5 ~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~ 44 (524)
.|+|+..++.|-..-+..||..|+++|++|.++..+.+..
T Consensus 103 vI~ivG~~GvGKTTl~~kLA~~l~~~G~kVllVd~D~~r~ 142 (504)
T 2j37_W 103 VIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLICADTFRA 142 (504)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEECCSSS
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHhCCCeEEEEeccccch
Confidence 5668888888999999999999999999999999876543
No 347
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=24.46 E-value=47 Score=26.50 Aligned_cols=40 Identities=5% Similarity=0.038 Sum_probs=28.1
Q ss_pred EEE-EEcCCCc--cCHHHHHHHHHHHHhCCCEE-EEEeCCcChh
Q 009851 5 RVL-VMPAPAQ--GHVIPLLEFSQCLAKHGFRV-TFVNTDYNHK 44 (524)
Q Consensus 5 ~il-~~~~~~~--GH~~p~l~LA~~L~~rGH~V-t~~~~~~~~~ 44 (524)
|++ +++.+-+ ......+.+|+.+.+.||+| +++-...-..
T Consensus 2 k~~iiv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff~~dGV~ 45 (130)
T 2hy5_A 2 KFALQINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFYHDGVN 45 (130)
T ss_dssp EEEEEECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEECGGGGG
T ss_pred EEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEEechHHH
Confidence 344 4444444 34567799999999999999 8887755443
No 348
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=24.45 E-value=72 Score=30.08 Aligned_cols=98 Identities=11% Similarity=0.058 Sum_probs=54.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc--ChhhHH---HhhhcCCCCCCCeEEEecCCCCCCCCCc
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY--NHKRVV---ESLQGKNYLGEQIHLVSIPDGMEPWEDR 75 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~--~~~~i~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 75 (524)
|++++|++.- +.|.+ -..|+++|.++||+|+.++-.. ..+... ... ..+++++..+-.
T Consensus 8 M~~~~IlVtG--atG~i--G~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~------~~~v~~~~~Dl~------- 70 (346)
T 3i6i_A 8 SPKGRVLIAG--ATGFI--GQFVATASLDAHRPTYILARPGPRSPSKAKIFKALE------DKGAIIVYGLIN------- 70 (346)
T ss_dssp ---CCEEEEC--TTSHH--HHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHH------HTTCEEEECCTT-------
T ss_pred CCCCeEEEEC--CCcHH--HHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHH------hCCcEEEEeecC-------
Confidence 4445665554 44533 3578999999999999998754 222221 110 035666553311
Q ss_pred ccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEECCCch------hHHHHHHHcC-CceEEE
Q 009851 76 NDLGKLIEKCLQVMPGKLEELIEEINSREDEKIDCFIADGNIG------WSMEIAKKMN-VRGAVF 134 (524)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~D~vI~D~~~~------~~~~~A~~lg-iP~i~~ 134 (524)
+ ...+.++++. .++|+||.-.... ..+.+|...| ++.+++
T Consensus 71 -d------------~~~l~~~~~~------~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~ 117 (346)
T 3i6i_A 71 -E------------QEAMEKILKE------HEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLP 117 (346)
T ss_dssp -C------------HHHHHHHHHH------TTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred -C------------HHHHHHHHhh------CCCCEEEECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence 0 1224444554 5789998754321 2456667777 777763
No 349
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=24.35 E-value=58 Score=32.55 Aligned_cols=34 Identities=15% Similarity=0.157 Sum_probs=26.4
Q ss_pred HHHHHHHHhcCCCCCccEEEECCCchhHHHHHHHcCCceEEEc
Q 009851 93 LEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFW 135 (524)
Q Consensus 93 ~~~ll~~l~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~i~~~ 135 (524)
+++++++ .+||++|.+.. ...+|+++|||++.+.
T Consensus 367 le~~i~~------~~pDllig~~~---~~~~a~k~gip~~~~g 400 (458)
T 3pdi_B 367 LEHAARA------GQAQLVIGNSH---ALASARRLGVPLLRAG 400 (458)
T ss_dssp HHHHHHH------HTCSEEEECTT---HHHHHHHTTCCEEECS
T ss_pred HHHHHHh------cCCCEEEEChh---HHHHHHHcCCCEEEec
Confidence 4455555 68999999854 6789999999998753
No 350
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=24.27 E-value=49 Score=29.65 Aligned_cols=33 Identities=21% Similarity=0.247 Sum_probs=27.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
++||.|+-.|..|- .||+.|.++||+|+.+...
T Consensus 6 ~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 6 RLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSSG
T ss_pred CcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecCH
Confidence 57899999988874 5899999999999987663
No 351
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=24.17 E-value=3.1e+02 Score=22.76 Aligned_cols=103 Identities=7% Similarity=0.075 Sum_probs=52.3
Q ss_pred HHHHHHHHHhCCCEEEEEeCCcC--hhhHHHhhhcCCCCCCCeEEEecCCCCC-CCCCcccHHHHHHHHHHhccHHHHHH
Q 009851 20 LLEFSQCLAKHGFRVTFVNTDYN--HKRVVESLQGKNYLGEQIHLVSIPDGME-PWEDRNDLGKLIEKCLQVMPGKLEEL 96 (524)
Q Consensus 20 ~l~LA~~L~~rGH~Vt~~~~~~~--~~~i~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l 96 (524)
...+.+.|.++|..+.++|.... ...+....... ....-+..+...+... ....... -...++.+
T Consensus 39 ~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~-gl~~~fd~i~~~~~~~~~~~~~KP-----------~p~~~~~~ 106 (189)
T 3ib6_A 39 AKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNF-GIIDYFDFIYASNSELQPGKMEKP-----------DKTIFDFT 106 (189)
T ss_dssp HHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHT-TCGGGEEEEEECCTTSSTTCCCTT-----------SHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhc-CchhheEEEEEccccccccCCCCc-----------CHHHHHHH
Confidence 35778999999999999997643 12222211100 0111244443333211 0000010 11223444
Q ss_pred HHHHhcCCCCCccEEEECCCchhHHHHHHHcCCceEEEccc
Q 009851 97 IEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPS 137 (524)
Q Consensus 97 l~~l~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~i~~~~~ 137 (524)
++.+.. ..-++++++-....-+..|+..|+.++.+...
T Consensus 107 ~~~~~~---~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~ 144 (189)
T 3ib6_A 107 LNALQI---DKTEAVMVGNTFESDIIGANRAGIHAIWLQNP 144 (189)
T ss_dssp HHHHTC---CGGGEEEEESBTTTTHHHHHHTTCEEEEECCT
T ss_pred HHHcCC---CcccEEEECCCcHHHHHHHHHCCCeEEEECCc
Confidence 444432 23345555544345788899999999987653
No 352
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=24.15 E-value=81 Score=28.23 Aligned_cols=35 Identities=17% Similarity=0.137 Sum_probs=26.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
+.|+++++.++.| =-..+|+.|+++|++|.++.-.
T Consensus 6 ~~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r~ 40 (252)
T 3h7a_A 6 RNATVAVIGAGDY---IGAEIAKKFAAEGFTVFAGRRN 40 (252)
T ss_dssp CSCEEEEECCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCCch---HHHHHHHHHHHCCCEEEEEeCC
Confidence 3467777766543 3578999999999999988754
No 353
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=24.08 E-value=92 Score=28.16 Aligned_cols=34 Identities=18% Similarity=0.273 Sum_probs=25.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
-|.++++.++.| --..+|++|+++|++|.++...
T Consensus 29 ~k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r~ 62 (271)
T 4iin_A 29 GKNVLITGASKG---IGAEIAKTLASMGLKVWINYRS 62 (271)
T ss_dssp CCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 356777765543 4568999999999999988763
No 354
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=24.04 E-value=81 Score=29.02 Aligned_cols=34 Identities=21% Similarity=0.213 Sum_probs=25.4
Q ss_pred CC-CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 009851 1 MS-RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (524)
Q Consensus 1 m~-~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~ 39 (524)
|+ +.||.|+-.|..|. .+|+.|.+.||+|+++..
T Consensus 1 M~~~~~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 35 (301)
T 3cky_A 1 MEKSIKIGFIGLGAMGK-----PMAINLLKEGVTVYAFDL 35 (301)
T ss_dssp ---CCEEEEECCCTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCCCCEEEEECccHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 54 57899998777764 468889999999987644
No 355
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=23.88 E-value=69 Score=29.20 Aligned_cols=34 Identities=21% Similarity=0.355 Sum_probs=26.5
Q ss_pred CEEEEEcCCCc--cCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 4 PRVLVMPAPAQ--GHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 4 ~~il~~~~~~~--GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
.+|++++.++- |+ -+.+|+.|+++|++|+++...
T Consensus 86 ~~vlVlcG~GNNGGD---Glv~AR~L~~~G~~V~v~~~~ 121 (259)
T 3d3k_A 86 PTVALLCGPHVKGAQ---GISCGRHLANHDVQVILFLPN 121 (259)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCEEEEECCB
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCeEEEEEec
Confidence 47888886543 44 378999999999999998653
No 356
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=23.82 E-value=65 Score=29.11 Aligned_cols=34 Identities=21% Similarity=0.365 Sum_probs=26.4
Q ss_pred CEEEEEcCCCc--cCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 4 PRVLVMPAPAQ--GHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 4 ~~il~~~~~~~--GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
.+|++++.++- |+ -+.+|+.|+++|++|+++...
T Consensus 59 ~~v~VlcG~GNNGGD---Glv~AR~L~~~G~~V~v~~~~ 94 (246)
T 1jzt_A 59 KHVFVIAGPGNNGGD---GLVCARHLKLFGYNPVVFYPK 94 (246)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCCEEEECCC
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCeEEEEEcC
Confidence 48888886653 44 378999999999999998653
No 357
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=23.70 E-value=87 Score=28.02 Aligned_cols=36 Identities=17% Similarity=0.099 Sum_probs=25.7
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHh-CCCEEEEEeCC
Q 009851 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAK-HGFRVTFVNTD 40 (524)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~LA~~L~~-rGH~Vt~~~~~ 40 (524)
.+.|.++++.++. - --..+|+.|++ +|++|.++.-.
T Consensus 2 ~~~k~vlITGasg-g--IG~~~a~~L~~~~g~~V~~~~r~ 38 (276)
T 1wma_A 2 SGIHVALVTGGNK-G--IGLAIVRDLCRLFSGDVVLTARD 38 (276)
T ss_dssp CCCCEEEESSCSS-H--HHHHHHHHHHHHSSSEEEEEESS
T ss_pred CCCCEEEEeCCCc-H--HHHHHHHHHHHhcCCeEEEEeCC
Confidence 3456667775443 2 34678999999 99999988754
No 358
>2nly_A BH1492 protein, divergent polysaccharide deacetylase hypothetical; PFAM04748, structural PSI, protein structure initiative; 2.50A {Bacillus halodurans} SCOP: c.6.2.7
Probab=23.64 E-value=4e+02 Score=23.86 Aligned_cols=39 Identities=18% Similarity=0.309 Sum_probs=29.7
Q ss_pred cHHHHHHHHHHhcCCCCCccEEEECCCch---hHHHHHHHcCCceEE
Q 009851 90 PGKLEELIEEINSREDEKIDCFIADGNIG---WSMEIAKKMNVRGAV 133 (524)
Q Consensus 90 ~~~~~~ll~~l~~~~~~~~D~vI~D~~~~---~~~~~A~~lgiP~i~ 133 (524)
...++.+++.+.. -.+++.|..+. -+..+|...|||++.
T Consensus 114 ~~~m~~vm~~l~~-----~gL~fvDS~Ts~~S~a~~~A~~~gvp~~~ 155 (245)
T 2nly_A 114 EKIMRAILEVVKE-----KNAFIIDSGTSPHSLIPQLAEELEVPYAT 155 (245)
T ss_dssp HHHHHHHHHHHHH-----TTCEEEECCCCSSCSHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHH-----CCCEEEcCCCCcccHHHHHHHHcCCCeEE
Confidence 4456677777764 25899998753 578999999999987
No 359
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=23.63 E-value=66 Score=29.36 Aligned_cols=31 Identities=23% Similarity=0.199 Sum_probs=24.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 5 ~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
||.|+-.|..| ..+|..|+++||+|+++...
T Consensus 2 ~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 2 KITVLGCGALG-----QLWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp EEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred eEEEECcCHHH-----HHHHHHHHhCCCCEEEEEcC
Confidence 68888776666 47899999999999998654
No 360
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=23.45 E-value=1.6e+02 Score=24.72 Aligned_cols=40 Identities=10% Similarity=0.179 Sum_probs=30.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
|+..||+|+.+++.. ..-+....+.|.+.|++|++++...
T Consensus 7 ~~~~~v~il~~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~ 46 (190)
T 2vrn_A 7 LTGKKIAILAADGVE-EIELTSPRAAIEAAGGTTELISLEP 46 (190)
T ss_dssp CTTCEEEEECCTTCB-HHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCCEEEEEeCCCCC-HHHHHHHHHHHHHCCCEEEEEecCC
Confidence 445789988776543 4556667788889999999999764
No 361
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=23.12 E-value=1e+02 Score=31.84 Aligned_cols=44 Identities=7% Similarity=0.091 Sum_probs=38.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcChhhH
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRV 46 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~i 46 (524)
+.+|++.+.++-.|-....-++..|..+|++|..+......+.+
T Consensus 98 ~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~vP~e~i 141 (579)
T 3bul_A 98 NGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEKI 141 (579)
T ss_dssp SCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBCHHHH
T ss_pred CCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 56899999999999999999999999999999999877554443
No 362
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=23.05 E-value=92 Score=28.43 Aligned_cols=37 Identities=19% Similarity=0.257 Sum_probs=27.0
Q ss_pred CC-CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 1 MS-RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 1 m~-~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
|+ +-|+++++.++.| =-..+|++|+++|++|.++...
T Consensus 1 M~l~gk~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 38 (281)
T 3zv4_A 1 MKLTGEVALITGGASG---LGRALVDRFVAEGARVAVLDKS 38 (281)
T ss_dssp CTTTTCEEEEETCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCcCCCEEEEECCCcH---HHHHHHHHHHHCcCEEEEEeCC
Confidence 44 3467777766543 3468999999999999988654
No 363
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=22.83 E-value=52 Score=30.60 Aligned_cols=32 Identities=9% Similarity=0.052 Sum_probs=26.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~ 39 (524)
++||.|+-.|..| ..+|+.|++.||+|+++..
T Consensus 7 ~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 38 (303)
T 3g0o_A 7 DFHVGIVGLGSMG-----MGAARSCLRAGLSTWGADL 38 (303)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCeEEEECCCHHH-----HHHHHHHHHCCCeEEEEEC
Confidence 4689999777666 4689999999999998854
No 364
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0
Probab=22.70 E-value=48 Score=29.02 Aligned_cols=41 Identities=24% Similarity=0.205 Sum_probs=27.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
|++...+++-.|..++..-+..+++.|.++|++|..+-.+.
T Consensus 1 me~g~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G 41 (258)
T 3dqz_A 1 MERKHHFVLVHNAYHGAWIWYKLKPLLESAGHRVTAVELAA 41 (258)
T ss_dssp --CCCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTT
T ss_pred CCCCCcEEEECCCCCccccHHHHHHHHHhCCCEEEEecCCC
Confidence 55533444444555666667789999999999988876544
No 365
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=22.68 E-value=76 Score=27.59 Aligned_cols=32 Identities=13% Similarity=0.233 Sum_probs=24.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~ 39 (524)
..+|.|+-.|..| ..+|+.|+++||+|+++..
T Consensus 19 ~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~~ 50 (209)
T 2raf_A 19 GMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYGS 50 (209)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECT
T ss_pred CCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEcC
Confidence 4578888766555 5689999999999998754
No 366
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=22.52 E-value=46 Score=30.82 Aligned_cols=27 Identities=7% Similarity=-0.018 Sum_probs=22.4
Q ss_pred cceEEecCChhhHHHHHHc----CCceeccC
Q 009851 386 IACFLSHCGWNSTMEGVSN----GIPFLCWP 412 (524)
Q Consensus 386 v~~~ItHgG~gs~~Eal~~----GvP~v~~P 412 (524)
++++|.-||-||+.+++.. ++|++.+|
T Consensus 64 ~D~vi~~GGDGT~l~a~~~~~~~~~P~lGI~ 94 (292)
T 2an1_A 64 ADLAVVVGGDGNMLGAARTLARYDINVIGIN 94 (292)
T ss_dssp CSEEEECSCHHHHHHHHHHHTTSSCEEEEBC
T ss_pred CCEEEEEcCcHHHHHHHHHhhcCCCCEEEEE
Confidence 3449999999999999853 78888887
No 367
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=22.40 E-value=97 Score=28.24 Aligned_cols=34 Identities=21% Similarity=0.262 Sum_probs=25.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
.|+++++.++.| =-..+|++|+++|++|.++...
T Consensus 27 ~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r~ 60 (277)
T 4dqx_A 27 QRVCIVTGGGSG---IGRATAELFAKNGAYVVVADVN 60 (277)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 467777766543 3568999999999999887654
No 368
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=22.25 E-value=82 Score=28.81 Aligned_cols=34 Identities=29% Similarity=0.457 Sum_probs=26.6
Q ss_pred CEEEEEcCCCc--cCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 4 PRVLVMPAPAQ--GHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 4 ~~il~~~~~~~--GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
.+|++++.++- |+ -+.+|+.|+++|++|+++...
T Consensus 80 ~~VlVlcG~GNNGGD---Glv~AR~L~~~G~~V~V~~~~ 115 (265)
T 2o8n_A 80 PTVLVICGPGNNGGD---GLVCARHLKLFGYQPTIYYPK 115 (265)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCEEEEECCS
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCcEEEEEeC
Confidence 48888886653 44 378999999999999998653
No 369
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=22.22 E-value=3.4e+02 Score=22.48 Aligned_cols=131 Identities=15% Similarity=0.190 Sum_probs=72.7
Q ss_pred EEEeecCCCCCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeeEEeccChhhhhc--CCCcceE
Q 009851 312 VYVSFGSFTILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLN--HPSIACF 389 (524)
Q Consensus 312 V~vs~GS~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~vpq~~lL~--~~~v~~~ 389 (524)
|-|-+||.+ +....++....++..+..+-..+-.- ...|+.+.+ +.+ +.+| |
T Consensus 2 V~Iimgs~S--D~~v~~~a~~~l~~~gi~~dv~V~sa------HR~p~~~~~----------------~~~~a~~~V--i 55 (157)
T 2ywx_A 2 ICIIMGSES--DLKIAEKAVNILKEFGVEFEVRVASA------HRTPELVEE----------------IVKNSKADV--F 55 (157)
T ss_dssp EEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTCHHHHHH----------------HHHHCCCSE--E
T ss_pred EEEEEccHH--HHHHHHHHHHHHHHcCCCeEEEEEcc------cCCHHHHHH----------------HHHhcCCCE--E
Confidence 344566643 67778888888988898865555332 344444331 111 1133 6
Q ss_pred EecCChh----hHHHHHHcCCceeccCcccch--hhhHHh-hcc--ccceeeE-EecCCCCCCCHHHHHHHHHHHhcCHH
Q 009851 390 LSHCGWN----STMEGVSNGIPFLCWPYFGDQ--FLNERY-ICD--FWKVGLK-FDRDEGGIITREEIKNKVDQVLGNQD 459 (524)
Q Consensus 390 ItHgG~g----s~~Eal~~GvP~v~~P~~~DQ--~~na~r-v~~--~lG~G~~-~~~~~~~~~t~~~l~~ai~~~l~~~~ 459 (524)
|.=.|.. ++..++ .-+|+|.+|. ... -..+-. +.+ . |+.+. +..+ ...++.-+...|. .+.|++
T Consensus 56 Ia~AG~aa~Lpgvva~~-t~~PVIgVP~-~~~l~G~daLlS~vqmP~-gvpVatV~I~--~~~nAa~lA~~Il-~~~d~~ 129 (157)
T 2ywx_A 56 IAIAGLAAHLPGVVASL-TTKPVIAVPV-DAKLDGLDALLSSVQMPP-GIPVATVGID--RGENAAILALEIL-ALKDEN 129 (157)
T ss_dssp EEEEESSCCHHHHHHTT-CSSCEEEEEE-CSSGGGHHHHHHHHSCCT-TSCCEECCTT--CHHHHHHHHHHHH-TTTCHH
T ss_pred EEEcCchhhhHHHHHhc-cCCCEEEecC-CCccCcHHHHHHHhcCCC-CCeeEEEecC--CcHHHHHHHHHHH-hcCCHH
Confidence 6665533 333332 4689999998 321 111111 222 2 54432 2221 3345555565554 456889
Q ss_pred HHHHHHHHHHHHHhh
Q 009851 460 FKARALELKEKAMSS 474 (524)
Q Consensus 460 ~r~~a~~l~~~~~~~ 474 (524)
++++.+..+++.++.
T Consensus 130 l~~kl~~~r~~~~~~ 144 (157)
T 2ywx_A 130 IAKKLIEYREKMKKK 144 (157)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999998888764
No 370
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=22.17 E-value=56 Score=27.52 Aligned_cols=34 Identities=12% Similarity=-0.057 Sum_probs=24.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhC-CCEEEEEeCCc
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKH-GFRVTFVNTDY 41 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~r-GH~Vt~~~~~~ 41 (524)
..||+++-.|.. -..+|+.|.++ ||+|+++....
T Consensus 39 ~~~v~IiG~G~~-----G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRI-----GTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHH-----HHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHH-----HHHHHHHHHhccCCeEEEEECCH
Confidence 357887754433 35678999999 99999987654
No 371
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=22.15 E-value=1.2e+02 Score=26.72 Aligned_cols=47 Identities=15% Similarity=0.106 Sum_probs=33.1
Q ss_pred HHHHHHHHHHhcC-CCCCccEEEECCCchhHHHHHHHcCCceEEEccc
Q 009851 91 GKLEELIEEINSR-EDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWPS 137 (524)
Q Consensus 91 ~~~~~ll~~l~~~-~~~~~D~vI~D~~~~~~~~~A~~lgiP~i~~~~~ 137 (524)
..++++++..+.. .+.+.-+||+|.-...+...|+++|||+..+.+.
T Consensus 14 snl~ali~~~~~~~l~~eI~~Visn~~~a~v~~~A~~~gIp~~~~~~~ 61 (211)
T 3p9x_A 14 TNAEAIIQSQKAGQLPCEVALLITDKPGAKVVERVKVHEIPVCALDPK 61 (211)
T ss_dssp HHHHHHHHHHHTTCCSSEEEEEEESCSSSHHHHHHHTTTCCEEECCGG
T ss_pred hHHHHHHHHHHcCCCCcEEEEEEECCCCcHHHHHHHHcCCCEEEeChh
Confidence 3466777766542 1135678899866556888999999999887653
No 372
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=22.14 E-value=99 Score=26.58 Aligned_cols=35 Identities=11% Similarity=0.184 Sum_probs=28.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 009851 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (524)
Q Consensus 5 ~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~ 39 (524)
.++++..+..|+-.-+..+++.|+++|+.|..+-.
T Consensus 33 p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 33 PIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp EEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 46666677778888899999999999999887765
No 373
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=22.07 E-value=1.8e+02 Score=26.11 Aligned_cols=39 Identities=18% Similarity=0.099 Sum_probs=28.8
Q ss_pred CCEEEEEcCCC-----------ccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 3 RPRVLVMPAPA-----------QGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 3 ~~~il~~~~~~-----------~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
++||+|+-... .-...=++.-...|.+.|++|+++++..
T Consensus 9 mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~g 58 (247)
T 3n7t_A 9 PRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASETG 58 (247)
T ss_dssp CSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 36888776542 1235667777899999999999999753
No 374
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=21.88 E-value=98 Score=27.72 Aligned_cols=34 Identities=15% Similarity=0.159 Sum_probs=25.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
-|.++++.++.| --..+|++|+++|++|.++.-.
T Consensus 8 gk~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r~ 41 (255)
T 4eso_A 8 GKKAIVIGGTHG---MGLATVRRLVEGGAEVLLTGRN 41 (255)
T ss_dssp TCEEEEETCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 367777766543 3468999999999999888654
No 375
>3ip0_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; alpha beta, ATP-binding, folate biosynthesis, nucleotide-binding; HET: APC HHR HHS; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1hka_A 1eqm_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 1q0n_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A 1kbr_A 1hq2_A* ...
Probab=21.71 E-value=1e+02 Score=25.73 Aligned_cols=28 Identities=21% Similarity=0.131 Sum_probs=21.1
Q ss_pred eEEEeecCCCCCCHHHHHHHHHHHhcCC
Q 009851 311 VVYVSFGSFTILDQVQFQELALGLELCK 338 (524)
Q Consensus 311 vV~vs~GS~~~~~~~~~~~l~~al~~~~ 338 (524)
+.|+++||......+.++..+++|.+..
T Consensus 2 iAyi~lGSNlGd~~~~l~~A~~~L~~~~ 29 (158)
T 3ip0_A 2 VAYIAIGSNLASPLEQVNAALKALGDIP 29 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEecchhhHHHHHHHHHHHHHcCC
Confidence 6799999987666667777777776543
No 376
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti}
Probab=21.69 E-value=2.3e+02 Score=27.40 Aligned_cols=92 Identities=12% Similarity=0.035 Sum_probs=49.5
Q ss_pred HHHHHHHhCCCEEEEEeCCcChhhHHHhhhcCCCCCCCeEE--EecCCCCCCCCCcccHHHHHHHHHHhccHHHHHHHHH
Q 009851 22 EFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHL--VSIPDGMEPWEDRNDLGKLIEKCLQVMPGKLEELIEE 99 (524)
Q Consensus 22 ~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 99 (524)
.|.+.|.+.|.+|.+++.+...+...+...... .. ++.+ ..++ +.+ .. +.+.+..+.
T Consensus 43 ~l~~~l~~~g~r~liVtd~~~~~~~~~~v~~~L-~~-g~~~~~~~~~-~~p------~~------------~~v~~~~~~ 101 (387)
T 3uhj_A 43 KLAAYLAPLGKRALVLIDRVLFDALSERIGKSC-GD-SLDIRFERFG-GEC------CT------------SEIERVRKV 101 (387)
T ss_dssp TTHHHHGGGCSEEEEEECTTTHHHHHHHC--------CCEEEEEECC-SSC------SH------------HHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEECchHHHHHHHHHHHHH-Hc-CCCeEEEEcC-CCC------CH------------HHHHHHHHH
Confidence 456667677888989888766543322211111 11 4554 2221 111 10 223344444
Q ss_pred HhcCCCCCccEEEECCCch---hHHHHHHHcCCceEEEccc
Q 009851 100 INSREDEKIDCFIADGNIG---WSMEIAKKMNVRGAVFWPS 137 (524)
Q Consensus 100 l~~~~~~~~D~vI~D~~~~---~~~~~A~~lgiP~i~~~~~ 137 (524)
+++ .++|+||.=.--. .+..+|...++|+|.+-|+
T Consensus 102 ~~~---~~~d~IIavGGGs~~D~AK~iA~~~~~p~i~IPTT 139 (387)
T 3uhj_A 102 AIE---HGSDILVGVGGGKTADTAKIVAIDTGARIVIAPTI 139 (387)
T ss_dssp HHH---HTCSEEEEESSHHHHHHHHHHHHHTTCEEEECCSS
T ss_pred Hhh---cCCCEEEEeCCcHHHHHHHHHHHhcCCCEEEecCc
Confidence 443 5789998543222 5667778889999997665
No 377
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=21.69 E-value=79 Score=28.42 Aligned_cols=37 Identities=19% Similarity=0.196 Sum_probs=22.5
Q ss_pred CCCCEEE-EEcCCCccCHHHHHHHHHHHHhCCCEEEEEe
Q 009851 1 MSRPRVL-VMPAPAQGHVIPLLEFSQCLAKHGFRVTFVN 38 (524)
Q Consensus 1 m~~~~il-~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~ 38 (524)
|++.+++ |.+.|--- ..-+-.....|+++|++|++++
T Consensus 1 ~~~~~vL~v~aHPDDe-~l~~Ggtia~~~~~G~~V~vv~ 38 (242)
T 2ixd_A 1 MSGLHILAFGAHADDV-EIGMAGTIAKYTKQGYEVGICD 38 (242)
T ss_dssp -CCCSEEEEESSTTHH-HHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCccEEEEEeCCChH-HHhHHHHHHHHHHCCCeEEEEE
Confidence 6777777 55555321 3344445566778999988876
No 378
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=21.68 E-value=1.1e+02 Score=27.84 Aligned_cols=34 Identities=15% Similarity=0.101 Sum_probs=26.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
-|.++++.++.| =-..+|++|+++|++|.++.-.
T Consensus 30 ~k~vlVTGas~G---IG~aia~~l~~~G~~Vi~~~r~ 63 (281)
T 3ppi_A 30 GASAIVSGGAGG---LGEATVRRLHADGLGVVIADLA 63 (281)
T ss_dssp TEEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeCC
Confidence 477888866654 3568999999999999887654
No 379
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=21.67 E-value=96 Score=27.99 Aligned_cols=35 Identities=20% Similarity=0.239 Sum_probs=26.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
+.|+++++.++.| =-..+|++|+++|++|.++...
T Consensus 24 ~~k~vlITGas~g---IG~~~a~~l~~~G~~v~~~~~~ 58 (269)
T 3gk3_A 24 AKRVAFVTGGMGG---LGAAISRRLHDAGMAVAVSHSE 58 (269)
T ss_dssp CCCEEEETTTTSH---HHHHHHHHHHTTTCEEEEEECS
T ss_pred cCCEEEEECCCch---HHHHHHHHHHHCCCEEEEEcCC
Confidence 4567788865542 3468899999999999888743
No 380
>4ehi_A Bifunctional purine biosynthesis protein PURH; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE BTB; 2.28A {Campylobacter jejuni subsp}
Probab=21.56 E-value=83 Score=31.67 Aligned_cols=41 Identities=22% Similarity=0.370 Sum_probs=30.5
Q ss_pred cCHHHHHHHHHHHHhCCCEEEEEeCCcChhhHHHhhhcCCCCCCCeEEEecC
Q 009851 15 GHVIPLLEFSQCLAKHGFRVTFVNTDYNHKRVVESLQGKNYLGEQIHLVSIP 66 (524)
Q Consensus 15 GH~~p~l~LA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~i~~~~~~ 66 (524)
++-.-++.+|+.|.+.|.++. ++......+++. |+.+..+.
T Consensus 32 ~DK~glv~~Ak~L~~lGfeI~--ATgGTak~L~e~---------GI~v~~V~ 72 (534)
T 4ehi_A 32 SDKEGIVEFGKELENLGFEIL--STGGTFKLLKEN---------GIKVIEVS 72 (534)
T ss_dssp SSCTTHHHHHHHHHHTTCEEE--ECHHHHHHHHHT---------TCCCEECB
T ss_pred cccccHHHHHHHHHHCCCEEE--EccHHHHHHHHC---------CCceeehh
Confidence 456668999999999998764 666777777775 56665554
No 381
>3ga2_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Bacillus subtilis}
Probab=21.53 E-value=84 Score=28.29 Aligned_cols=30 Identities=20% Similarity=0.061 Sum_probs=22.9
Q ss_pred CCccEEEECCCchh-------HHHHHHHcCCceEEEc
Q 009851 106 EKIDCFIADGNIGW-------SMEIAKKMNVRGAVFW 135 (524)
Q Consensus 106 ~~~D~vI~D~~~~~-------~~~~A~~lgiP~i~~~ 135 (524)
.+||++++|..... +..+.-.+|+|.|.+.
T Consensus 108 ~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVA 144 (246)
T 3ga2_A 108 TEPDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIA 144 (246)
T ss_dssp SCCSCEEEEBCSSSSTTSCCHHHHHHHHHTSCEEEEE
T ss_pred CCCCEEEEcCcEEecCCCcchhheeeeecCCCEEeee
Confidence 58999999986542 4556667789999875
No 382
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=21.45 E-value=1.3e+02 Score=28.30 Aligned_cols=76 Identities=13% Similarity=0.240 Sum_probs=52.0
Q ss_pred CCCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeeEEeccChhhhhc-CCCcceEEecCChhhH
Q 009851 320 TILDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLN-HPSIACFLSHCGWNST 398 (524)
Q Consensus 320 ~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~vpq~~lL~-~~~v~~~ItHgG~gs~ 398 (524)
+..+.+..+.+.+++.....+.||...++.+. .++.++++...+-+ +|+. ||=+.-...+
T Consensus 62 agtd~~Ra~dL~~a~~Dp~i~aI~~~rGGyga-----------------~rlLp~LD~~~i~~a~PK~--~iGySDiTaL 122 (311)
T 1zl0_A 62 AGTVEQRLEDLHNAFDMPDITAVWCLRGGYGC-----------------GQLLPGLDWGRLQAASPRP--LIGFSDISVL 122 (311)
T ss_dssp SSCHHHHHHHHHHHHHSTTEEEEEESCCSSCG-----------------GGGTTTCCHHHHHHSCCCC--EEECGGGHHH
T ss_pred CCCHHHHHHHHHHHHhCCCCCEEEEccCCcCH-----------------HHHhhccchhhhhccCCCE--EEEEchhHHH
Confidence 33456667779999999999999998776321 11344455555555 7777 8888888888
Q ss_pred HHHHH-cCCceeccCcc
Q 009851 399 MEGVS-NGIPFLCWPYF 414 (524)
Q Consensus 399 ~Eal~-~GvP~v~~P~~ 414 (524)
.-+++ .|++.+-=|..
T Consensus 123 ~~al~~~G~~t~hGp~~ 139 (311)
T 1zl0_A 123 LSAFHRHGLPAIHGPVA 139 (311)
T ss_dssp HHHHHHTTCCEEECCCG
T ss_pred HHHHHHcCCcEEECHhh
Confidence 88876 37766665543
No 383
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=21.43 E-value=1.1e+02 Score=27.26 Aligned_cols=34 Identities=18% Similarity=0.325 Sum_probs=25.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
.|+++++.++.| --..+|++|+++|++|.++...
T Consensus 9 ~k~vlITGas~g---iG~~~a~~l~~~G~~V~~~~r~ 42 (253)
T 3qiv_A 9 NKVGIVTGSGGG---IGQAYAEALAREGAAVVVADIN 42 (253)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEcCC
Confidence 466777755432 3568999999999999887654
No 384
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=21.39 E-value=1.5e+02 Score=23.50 Aligned_cols=50 Identities=12% Similarity=0.017 Sum_probs=31.0
Q ss_pred cCCceeccCcccchhhhHHhhccccc-e-eeEEecCCCCCCCHHHHHHHHHHHhcCHHH
Q 009851 404 NGIPFLCWPYFGDQFLNERYICDFWK-V-GLKFDRDEGGIITREEIKNKVDQVLGNQDF 460 (524)
Q Consensus 404 ~GvP~v~~P~~~DQ~~na~rv~~~lG-~-G~~~~~~~~~~~t~~~l~~ai~~~l~~~~~ 460 (524)
..+|+|++--..|.......+ + .| + +... +.++.++|.++|.+++....+
T Consensus 75 ~~~~ii~~s~~~~~~~~~~~~-~-~g~~~~~l~-----KP~~~~~L~~~i~~~l~~~~~ 126 (151)
T 3kcn_A 75 PNSVYLMLTGNQDLTTAMEAV-N-EGQVFRFLN-----KPCQMSDIKAAINAGIKQYDL 126 (151)
T ss_dssp SSCEEEEEECGGGHHHHHHHH-H-HTCCSEEEE-----SSCCHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEECCCCHHHHHHHH-H-cCCeeEEEc-----CCCCHHHHHHHHHHHHHHHHH
Confidence 456766665444443333333 3 26 4 4444 458999999999999965443
No 385
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=21.36 E-value=99 Score=31.05 Aligned_cols=36 Identities=14% Similarity=0.118 Sum_probs=29.4
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhC-CC-EEEEEeCCcC
Q 009851 2 SRPRVLVMPAPAQGHVIPLLEFSQCLAKH-GF-RVTFVNTDYN 42 (524)
Q Consensus 2 ~~~~il~~~~~~~GH~~p~l~LA~~L~~r-GH-~Vt~~~~~~~ 42 (524)
..+||.|+-.|..| ..+|..|++. || +|+++-....
T Consensus 17 ~~mkIaVIGlG~mG-----~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 17 PIKKIGVLGMGYVG-----IPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp SCCEEEEECCSTTH-----HHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCCEEEEECcCHHH-----HHHHHHHHHhCCCCeEEEEECChh
Confidence 34689999888877 5789999999 99 9999876543
No 386
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=21.33 E-value=98 Score=30.70 Aligned_cols=33 Identities=30% Similarity=0.312 Sum_probs=26.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
..||+|+-.+..| +.+|+.|+++||+|+..=..
T Consensus 9 ~k~v~viG~G~sG-----~s~A~~l~~~G~~V~~~D~~ 41 (451)
T 3lk7_A 9 NKKVLVLGLARSG-----EAAARLLAKLGAIVTVNDGK 41 (451)
T ss_dssp TCEEEEECCTTTH-----HHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEEeeCHHH-----HHHHHHHHhCCCEEEEEeCC
Confidence 4689999886554 35699999999999998653
No 387
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A*
Probab=21.26 E-value=48 Score=31.88 Aligned_cols=41 Identities=20% Similarity=0.261 Sum_probs=29.7
Q ss_pred CCCCEEEEEcCCCcc-CH---HHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 1 MSRPRVLVMPAPAQG-HV---IPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 1 m~~~~il~~~~~~~G-H~---~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
|+|.||+++..|-.+ |= .....++++|.+.||+|+.+-...
T Consensus 1 m~~~~v~vl~GG~S~E~evSl~S~~~v~~al~~~~~~v~~i~i~~ 45 (364)
T 3i12_A 1 MAKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKTRFDVVLLGIDK 45 (364)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECT
T ss_pred CCccEEEEEeccCCCCccchHHHHHHHHHHHhhcCCeEEEEEECC
Confidence 888899988865333 32 444578899988999999988643
No 388
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=21.12 E-value=1.2e+02 Score=26.80 Aligned_cols=45 Identities=13% Similarity=0.224 Sum_probs=31.5
Q ss_pred HHHHHHHHHhcCCCCCccEEEECCCchhHHHHHHHcCCceEEEcc
Q 009851 92 KLEELIEEINSREDEKIDCFIADGNIGWSMEIAKKMNVRGAVFWP 136 (524)
Q Consensus 92 ~~~~ll~~l~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~i~~~~ 136 (524)
.++++++.+.+..+.+.-+||+|.-...+...|+++|||+..+.+
T Consensus 18 nl~all~~~~~~~~~eI~~Vis~~~~a~~~~~A~~~gIp~~~~~~ 62 (215)
T 3tqr_A 18 NLQAIIGAIQKGLAIEIRAVISNRADAYGLKRAQQADIPTHIIPH 62 (215)
T ss_dssp HHHHHHHHHHTTCSEEEEEEEESCTTCHHHHHHHHTTCCEEECCG
T ss_pred HHHHHHHHHHcCCCCEEEEEEeCCcchHHHHHHHHcCCCEEEeCc
Confidence 456666665531114567888986655678899999999998754
No 389
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=20.88 E-value=1.2e+02 Score=27.19 Aligned_cols=33 Identities=27% Similarity=0.411 Sum_probs=24.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 5 ~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
|.++++.++.| =-..+|+.|+++||+|.++.-.
T Consensus 8 k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r~ 40 (267)
T 2gdz_A 8 KVALVTGAAQG---IGRAFAEALLLKGAKVALVDWN 40 (267)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCCc---HHHHHHHHHHHCCCEEEEEECC
Confidence 56677755432 3467899999999999987654
No 390
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=20.82 E-value=74 Score=30.46 Aligned_cols=35 Identities=17% Similarity=0.124 Sum_probs=25.6
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
|+..+|+++-.|-. -+.+|..|+++|++|+++-..
T Consensus 9 m~~~dVvIVGaG~a-----Gl~~A~~L~~~G~~v~viE~~ 43 (379)
T 3alj_A 9 GKTRRAEVAGGGFA-----GLTAAIALKQNGWDVRLHEKS 43 (379)
T ss_dssp --CCEEEEECCSHH-----HHHHHHHHHHTTCEEEEECSS
T ss_pred CCCCeEEEECCCHH-----HHHHHHHHHHCCCCEEEEecC
Confidence 34467888776533 478899999999999998643
No 391
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=20.74 E-value=1.2e+02 Score=27.39 Aligned_cols=35 Identities=14% Similarity=0.114 Sum_probs=27.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
+-|+++++.++.| =-.++|+.|+++|++|.+..-.
T Consensus 10 ~GK~alVTGas~G---IG~aia~~la~~Ga~V~~~~r~ 44 (261)
T 4h15_A 10 RGKRALITAGTKG---AGAATVSLFLELGAQVLTTARA 44 (261)
T ss_dssp TTCEEEESCCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEeccCcH---HHHHHHHHHHHcCCEEEEEECC
Confidence 3488999977765 3478999999999999887643
No 392
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=20.71 E-value=2.5e+02 Score=26.61 Aligned_cols=26 Identities=23% Similarity=0.496 Sum_probs=20.3
Q ss_pred CCCcceEEecCChhhH---HHHHHcCCceec
Q 009851 383 HPSIACFLSHCGWNST---MEGVSNGIPFLC 410 (524)
Q Consensus 383 ~~~v~~~ItHgG~gs~---~Eal~~GvP~v~ 410 (524)
.|++ +|++||.-|. ..|-..|+|+++
T Consensus 92 ~PDv--Vi~~g~~~s~p~~laA~~~~iP~vi 120 (365)
T 3s2u_A 92 RPVC--VLGLGGYVTGPGGLAARLNGVPLVI 120 (365)
T ss_dssp CCSE--EEECSSSTHHHHHHHHHHTTCCEEE
T ss_pred CCCE--EEEcCCcchHHHHHHHHHcCCCEEE
Confidence 5666 9999997764 556778999986
No 393
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=20.69 E-value=1.2e+02 Score=28.17 Aligned_cols=39 Identities=13% Similarity=-0.003 Sum_probs=29.0
Q ss_pred CCEEEEEcCCCcc-C---HHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 3 RPRVLVMPAPAQG-H---VIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 3 ~~~il~~~~~~~G-H---~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
+.||+++..+-.+ | +.....++++|.+.||+|..+....
T Consensus 13 ~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~~ 55 (317)
T 4eg0_A 13 FGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPAE 55 (317)
T ss_dssp GCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred cceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 4678888754322 2 4577899999999999999998543
No 394
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=20.61 E-value=1.1e+02 Score=27.28 Aligned_cols=34 Identities=21% Similarity=0.275 Sum_probs=25.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
-|.++++.++.| --..+|+.|+++|++|.++.-.
T Consensus 4 ~k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r~ 37 (260)
T 1x1t_A 4 GKVAVVTGSTSG---IGLGIATALAAQGADIVLNGFG 37 (260)
T ss_dssp TCEEEETTCSSH---HHHHHHHHHHHTTCEEEEECCS
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHcCCEEEEEeCC
Confidence 356777755543 3578999999999999887643
No 395
>2qx0_A 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase; 3-layered alpha-BATA-alpha fold, homodimer, ternary complex, transferase; HET: APC PH2; 1.80A {Yersinia pestis}
Probab=20.56 E-value=1.3e+02 Score=25.13 Aligned_cols=28 Identities=21% Similarity=0.203 Sum_probs=23.2
Q ss_pred eEEEeecCCCCCCHHHHHHHHHHHhcCC
Q 009851 311 VVYVSFGSFTILDQVQFQELALGLELCK 338 (524)
Q Consensus 311 vV~vs~GS~~~~~~~~~~~l~~al~~~~ 338 (524)
.+|+++||........++..+++|+..+
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 30 (159)
T 2qx0_A 3 RVYIALGSNLAMPLQQVSAAREALAHLP 30 (159)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHHHTCT
T ss_pred EEEEEEeCchhhHHHHHHHHHHHHhcCC
Confidence 5899999998778888888888887653
No 396
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=20.54 E-value=1.2e+02 Score=27.27 Aligned_cols=34 Identities=12% Similarity=0.138 Sum_probs=25.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
-|.++++.++.| =-..+|++|+++|++|.++...
T Consensus 10 ~k~~lVTGas~g---IG~aia~~l~~~G~~V~~~~r~ 43 (267)
T 3t4x_A 10 GKTALVTGSTAG---IGKAIATSLVAEGANVLINGRR 43 (267)
T ss_dssp TCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 467788866543 3468999999999999988654
No 397
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=20.53 E-value=1.1e+02 Score=30.06 Aligned_cols=35 Identities=9% Similarity=-0.020 Sum_probs=22.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcC
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYN 42 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~~ 42 (524)
++||+++-.++. -.+||+.|++.+.--.+++.+.+
T Consensus 3 ~mkvlviG~ggr-----e~ala~~l~~s~~v~~v~~~pgn 37 (431)
T 3mjf_A 3 AMNILIIGNGGR-----EHALGWKAAQSPLADKIYVAPGN 37 (431)
T ss_dssp CEEEEEEECSHH-----HHHHHHHHTTCTTEEEEEEEECC
T ss_pred CcEEEEECCCHH-----HHHHHHHHHhCCCCCEEEEECCC
Confidence 468999976654 44689999988753333333444
No 398
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=20.51 E-value=1.1e+02 Score=27.34 Aligned_cols=34 Identities=21% Similarity=0.318 Sum_probs=25.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
-|+++++.++.| =-..+|++|+++|++|.++.-.
T Consensus 6 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r~ 39 (257)
T 3imf_A 6 EKVVIITGGSSG---MGKGMATRFAKEGARVVITGRT 39 (257)
T ss_dssp TCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 356777766543 3578999999999999887654
No 399
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=20.48 E-value=75 Score=29.44 Aligned_cols=33 Identities=12% Similarity=0.144 Sum_probs=23.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 5 ~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
+|++. |+.|.+ -..|+++|.++||+|+.++-..
T Consensus 13 ~ilVt--GatG~i--G~~l~~~L~~~g~~V~~l~R~~ 45 (318)
T 2r6j_A 13 KILIF--GGTGYI--GNHMVKGSLKLGHPTYVFTRPN 45 (318)
T ss_dssp CEEEE--TTTSTT--HHHHHHHHHHTTCCEEEEECTT
T ss_pred eEEEE--CCCchH--HHHHHHHHHHCCCcEEEEECCC
Confidence 45444 444554 4578999999999999988654
No 400
>1f9y_A HPPK, protein (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase); pyrophosphoryl transfer, catalytic mechanism, folate, ternary complex; HET: APC HHR; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1eqm_A* 1hka_A 1q0n_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 3h4a_A* 3ip0_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A ...
Probab=20.47 E-value=1.1e+02 Score=25.47 Aligned_cols=28 Identities=21% Similarity=0.131 Sum_probs=22.1
Q ss_pred eEEEeecCCCCCCHHHHHHHHHHHhcCC
Q 009851 311 VVYVSFGSFTILDQVQFQELALGLELCK 338 (524)
Q Consensus 311 vV~vs~GS~~~~~~~~~~~l~~al~~~~ 338 (524)
.+|+++||........++..+++|+..+
T Consensus 2 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 29 (158)
T 1f9y_A 2 VAYIAIGSNLASPLEQVNAALKALGDIP 29 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcCC
Confidence 6899999987666777888888887653
No 401
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=20.42 E-value=41 Score=30.65 Aligned_cols=52 Identities=13% Similarity=0.171 Sum_probs=36.8
Q ss_pred cceEEecCChhhHHHHHHc---CCceeccCcccchhhhHHhhccccceeeEEecCCCCCCCHHHHHHHHHHHhcC
Q 009851 386 IACFLSHCGWNSTMEGVSN---GIPFLCWPYFGDQFLNERYICDFWKVGLKFDRDEGGIITREEIKNKVDQVLGN 457 (524)
Q Consensus 386 v~~~ItHgG~gs~~Eal~~---GvP~v~~P~~~DQ~~na~rv~~~lG~G~~~~~~~~~~~t~~~l~~ai~~~l~~ 457 (524)
++++|+=||-||+.+++.. ++|++.++. + . +|.- ..+.++++.++++.+++.
T Consensus 42 ~D~vv~~GGDGTll~~a~~~~~~~PilGIn~-G----------~-~Gfl--------~~~~~~~~~~al~~i~~g 96 (258)
T 1yt5_A 42 ADLIVVVGGDGTVLKAAKKAADGTPMVGFKA-G----------R-LGFL--------TSYTLDEIDRFLEDLRNW 96 (258)
T ss_dssp CSEEEEEECHHHHHHHHTTBCTTCEEEEEES-S----------S-CCSS--------CCBCGGGHHHHHHHHHTT
T ss_pred CCEEEEEeCcHHHHHHHHHhCCCCCEEEEEC-C----------C-CCcc--------CcCCHHHHHHHHHHHHcC
Confidence 4459999999999999887 788877762 2 1 1222 124577888888888753
No 402
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=20.40 E-value=60 Score=30.40 Aligned_cols=33 Identities=6% Similarity=0.024 Sum_probs=26.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCC-EEEEEeCC
Q 009851 3 RPRVLVMPAPAQGHVIPLLEFSQCLAKHGF-RVTFVNTD 40 (524)
Q Consensus 3 ~~~il~~~~~~~GH~~p~l~LA~~L~~rGH-~Vt~~~~~ 40 (524)
.+||.|+-.|..| ..+|+.|++.|| +|+++...
T Consensus 24 ~~~I~iIG~G~mG-----~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAA-----SAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHHSCCEEEEECSS
T ss_pred CCEEEEECccHHH-----HHHHHHHHHCCCCeEEEEcCC
Confidence 4688898877666 478999999999 99987663
No 403
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=20.38 E-value=1.5e+02 Score=25.16 Aligned_cols=88 Identities=18% Similarity=0.095 Sum_probs=57.4
Q ss_pred CccCHHHHHHHHHHHHhC--CCEEEEEeCCcChhhHHH-hhhcCCCCCCCeEEEecCCCCCCCCCcccHHHHHHHHHHhc
Q 009851 13 AQGHVIPLLEFSQCLAKH--GFRVTFVNTDYNHKRVVE-SLQGKNYLGEQIHLVSIPDGMEPWEDRNDLGKLIEKCLQVM 89 (524)
Q Consensus 13 ~~GH~~p~l~LA~~L~~r--GH~Vt~~~~~~~~~~i~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (524)
.-.+-.-++.+|+.|.+. ||+ ++.+......+++ . |+....+-.+.. + .
T Consensus 35 ~D~dK~~lv~~ak~~~~lL~Gf~--L~AT~gTa~~L~e~~---------Gl~v~~v~k~~e-G----------------G 86 (178)
T 1vmd_A 35 HDRRKRDLLEWVSFNLGTLSKHE--LYATGTTGALLQEKL---------GLKVHRLKSGPL-G----------------G 86 (178)
T ss_dssp CGGGHHHHHHHHHHSHHHHTTSE--EEECHHHHHHHHHHH---------CCCCEECSCGGG-T----------------H
T ss_pred ehhhHHHHHHHHHHHHHHhcCCE--EEEchHHHHHHHHHh---------CceeEEEeecCC-C----------------C
Confidence 346668899999999999 995 4566677777766 4 555444321110 0 2
Q ss_pred cHHHHHHHHHHhcCCCCCccEEEECCC--ch--------hHHHHHHHcCCceEEE
Q 009851 90 PGKLEELIEEINSREDEKIDCFIADGN--IG--------WSMEIAKKMNVRGAVF 134 (524)
Q Consensus 90 ~~~~~~ll~~l~~~~~~~~D~vI~D~~--~~--------~~~~~A~~lgiP~i~~ 134 (524)
++.+-++++. .+.|+||.-.- .. .-..+|-..|||++..
T Consensus 87 ~pqI~d~I~~------geIdlVInt~dPl~~~~h~~D~~~IRR~A~~~~IP~~Tn 135 (178)
T 1vmd_A 87 DQQIGAMIAE------GKIDVLIFFWDPLEPQAHDVDVKALIRIATVYNIPVAIT 135 (178)
T ss_dssp HHHHHHHHHT------TSCCEEEEECCSSSCCTTSCCHHHHHHHHHHTTCCEESS
T ss_pred CchHHHHHHC------CCccEEEEccCccCCCcccccHHHHHHHHHHcCCCEEeC
Confidence 3345566665 89999995332 21 2567899999999873
No 404
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=20.33 E-value=1.1e+02 Score=28.04 Aligned_cols=32 Identities=16% Similarity=0.164 Sum_probs=25.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEe
Q 009851 4 PRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVN 38 (524)
Q Consensus 4 ~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~ 38 (524)
.|+++++.++.| =-..+|+.|+++|++|.++.
T Consensus 9 ~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~ 40 (291)
T 1e7w_A 9 VPVALVTGAAKR---LGRSIAEGLHAEGYAVCLHY 40 (291)
T ss_dssp CCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCch---HHHHHHHHHHHCCCeEEEEc
Confidence 367788866543 35689999999999999887
No 405
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A 2xy4_A* 2xqv_A* 2xh8_A
Probab=20.31 E-value=1.2e+02 Score=27.97 Aligned_cols=40 Identities=20% Similarity=0.298 Sum_probs=30.2
Q ss_pred HHHHHHHHhcCCCCCccEEEECCCch--hHHHHHHHcCCceEEEc
Q 009851 93 LEELIEEINSREDEKIDCFIADGNIG--WSMEIAKKMNVRGAVFW 135 (524)
Q Consensus 93 ~~~ll~~l~~~~~~~~D~vI~D~~~~--~~~~~A~~lgiP~i~~~ 135 (524)
+.++++.+++ .+..+|+++.... .+-.+|+..|++.+.+.
T Consensus 212 l~~l~~~ik~---~~v~~if~e~~~~~~~~~~ia~~~g~~v~~ld 253 (284)
T 2prs_A 212 LHEIRTQLVE---QKATCVFAEPQFRPAVVESVARGTSVRMGTLD 253 (284)
T ss_dssp HHHHHHHHHH---TTCCEEEECTTSCSHHHHHHTTTSCCEEEECC
T ss_pred HHHHHHHHHH---cCCCEEEEeCCCChHHHHHHHHHcCCeEEEec
Confidence 4555555555 7899999998765 57788999999987653
No 406
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=20.27 E-value=1.1e+02 Score=26.98 Aligned_cols=36 Identities=14% Similarity=0.159 Sum_probs=24.6
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
|+. |.++++.++.| --..+|+.|+++|++|.++.-.
T Consensus 1 m~~-k~vlITGas~g---IG~~~a~~l~~~G~~V~~~~r~ 36 (236)
T 1ooe_A 1 MSS-GKVIVYGGKGA---LGSAILEFFKKNGYTVLNIDLS 36 (236)
T ss_dssp -CC-EEEEEETTTSH---HHHHHHHHHHHTTEEEEEEESS
T ss_pred CCC-CEEEEECCCcH---HHHHHHHHHHHCCCEEEEEecC
Confidence 543 45566644432 3468999999999999987654
No 407
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=20.14 E-value=74 Score=28.34 Aligned_cols=23 Identities=22% Similarity=0.234 Sum_probs=19.3
Q ss_pred HHHHHHHHHHhCCCEEEEEeCCc
Q 009851 19 PLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 19 p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
--..+|++|+++|++|+++..+.
T Consensus 36 iG~aiA~~~~~~Ga~V~l~~~~~ 58 (226)
T 1u7z_A 36 MGFAIAAAAARRGANVTLVSGPV 58 (226)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSC
T ss_pred HHHHHHHHHHHCCCEEEEEECCc
Confidence 45789999999999999987654
No 408
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=20.11 E-value=1.2e+02 Score=25.92 Aligned_cols=36 Identities=17% Similarity=0.166 Sum_probs=28.0
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 5 RVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 5 ~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
.++++..+..|...-+..+++.|+++|+.|..+-..
T Consensus 29 p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 64 (236)
T 1zi8_A 29 PVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDLY 64 (236)
T ss_dssp EEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECGG
T ss_pred CEEEEEcCCCCCCHHHHHHHHHHHhCCcEEEecccc
Confidence 355666677777778899999999999998776643
No 409
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=20.11 E-value=1e+02 Score=29.27 Aligned_cols=73 Identities=15% Similarity=0.180 Sum_probs=52.6
Q ss_pred CCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCCCCCChhhHHhhcCCeeEEeccChhhhhcCCCcceEEecCChhhHHHH
Q 009851 322 LDQVQFQELALGLELCKRPFLWVVRPDITTDANDRYPEGFQERVAARGQMISWAPQLRVLNHPSIACFLSHCGWNSTMEG 401 (524)
Q Consensus 322 ~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~~~~~l~~~~~~~~~~n~~v~~~vpq~~lL~~~~v~~~ItHgG~gs~~Ea 401 (524)
.+.+..+.+.+++.....+.||...++.+. .++.++++...|-++|+. ||=+.-...+.-+
T Consensus 63 ~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~-----------------~rlL~~lD~~~i~~~PK~--~~GySDiTaL~~a 123 (336)
T 3sr3_A 63 SIQERAKELNALIRNPNVSCIMSTIGGMNS-----------------NSLLPYIDYDAFQNNPKI--MIGYSDATALLLG 123 (336)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCSCG-----------------GGGGGGSCHHHHHHSCCE--EEECGGGHHHHHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEccccccH-----------------HHHhhhcChhHHhhCCeE--EEEechHHHHHHH
Confidence 345567779999999999999998776211 124455665566667877 8888888888888
Q ss_pred HH--cCCceeccCc
Q 009851 402 VS--NGIPFLCWPY 413 (524)
Q Consensus 402 l~--~GvP~v~~P~ 413 (524)
++ .|+..+-=|.
T Consensus 124 l~~~~G~~t~hGp~ 137 (336)
T 3sr3_A 124 IYAKTGIPTFYGPA 137 (336)
T ss_dssp HHHHHCCCEEECCC
T ss_pred HHHhcCceEEECCh
Confidence 87 4777776665
No 410
>1xfi_A Unknown protein; structural genomics, protein structure initiative, CESG, AT2G17340, center for eukaryotic structural genomics; 1.70A {Arabidopsis thaliana} SCOP: e.50.1.1 PDB: 2q40_A
Probab=20.08 E-value=98 Score=29.83 Aligned_cols=38 Identities=13% Similarity=0.363 Sum_probs=30.0
Q ss_pred CEEEEEcCCCc-cCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 009851 4 PRVLVMPAPAQ-GHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (524)
Q Consensus 4 ~~il~~~~~~~-GH~~p~l~LA~~L~~rGH~Vt~~~~~~ 41 (524)
.+|+++.--+. .-+.=++.|++.|.++|++|++++-..
T Consensus 213 k~Vl~v~DNAG~Eiv~D~L~La~~Ll~~g~kVvl~vK~~ 251 (367)
T 1xfi_A 213 KKAVIFVDNSGADIILGILPFARELLRRGAQVVLAANEL 251 (367)
T ss_dssp CEEEEECCBTTHHHHHTHHHHHHHHHHTTCEEEEEEBSS
T ss_pred CEEEEEecCCCchhhccHHHHHHHHHHcCCEEEEEECCc
Confidence 57888887766 444445889999999999999988654
No 411
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=20.07 E-value=4.6e+02 Score=23.21 Aligned_cols=31 Identities=19% Similarity=0.039 Sum_probs=21.1
Q ss_pred CCccEEEECCCch----hHHHHHHHcCCceEEEcc
Q 009851 106 EKIDCFIADGNIG----WSMEIAKKMNVRGAVFWP 136 (524)
Q Consensus 106 ~~~D~vI~D~~~~----~~~~~A~~lgiP~i~~~~ 136 (524)
.++|.||...... .....+...|||+|.+..
T Consensus 63 ~~vdgiI~~~~~~~~~~~~~~~~~~~~iPvV~~~~ 97 (293)
T 3l6u_A 63 LKVDAIFITTLDDVYIGSAIEEAKKAGIPVFAIDR 97 (293)
T ss_dssp TTCSEEEEECSCTTTTHHHHHHHHHTTCCEEEESS
T ss_pred cCCCEEEEecCChHHHHHHHHHHHHcCCCEEEecC
Confidence 5889888755433 234455677999998754
No 412
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=20.02 E-value=60 Score=32.71 Aligned_cols=35 Identities=17% Similarity=0.295 Sum_probs=27.7
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 009851 1 MSRPRVLVMPAPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (524)
Q Consensus 1 m~~~~il~~~~~~~GH~~p~l~LA~~L~~rGH~Vt~~~~~ 40 (524)
|.+++|.|+-.|..| ..||+.|+++||+|++....
T Consensus 2 ~~~~kIgiIGlG~MG-----~~lA~~L~~~G~~V~v~dr~ 36 (484)
T 4gwg_A 2 NAQADIALIGLAVMG-----QNLILNMNDHGFVVCAFNRT 36 (484)
T ss_dssp -CCBSEEEECCSHHH-----HHHHHHHHHTTCCEEEECSS
T ss_pred CCCCEEEEEChhHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 566789999887666 56899999999999987543
Done!