BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009853
(524 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3CIA|A Chain A, Crystal Structure Of Cold-Aminopeptidase From Colwellia
Psychrerythraea
pdb|3CIA|B Chain B, Crystal Structure Of Cold-Aminopeptidase From Colwellia
Psychrerythraea
pdb|3CIA|C Chain C, Crystal Structure Of Cold-Aminopeptidase From Colwellia
Psychrerythraea
pdb|3CIA|D Chain D, Crystal Structure Of Cold-Aminopeptidase From Colwellia
Psychrerythraea
Length = 605
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/291 (33%), Positives = 155/291 (53%), Gaps = 10/291 (3%)
Query: 234 VYAESGFTTYAERRIVEVVQGEDRAVLNIGIGWRGLNEEMERFKDNLECTKLKTNQEGLD 293
++ GFT+Y E RI+E V G DRAV+ +G + LN E+ + T+L + +G D
Sbjct: 319 LWLNEGFTSYVENRIMEAVFGTDRAVMEQALGAQDLNAEILEL--DASDTQLYIDLKGRD 376
Query: 294 PDDVYSQVPYEKGFQFLWRIERQIGRPAFDEFIKKYIATFKFKSIDTETFLNFLKENV-- 351
PDD +S VPY KG FL +E + GR FD F+ +Y + F+S+ T+ F+ +LK N+
Sbjct: 377 PDDAFSGVPYVKGQLFLMYLEEKFGRERFDAFVLEYFDSHAFQSLGTDNFVKYLKANLTD 436
Query: 352 --PGIEKQIDLELWTEGTGIPPDAYEPVSSLYSKIVSLANEFKLGKIPKED-EVADWQGQ 408
P I ++ W G+P A +P S+ + I N+ ++ E A W
Sbjct: 437 KYPNIVSDNEINEWIFKAGLPSYAPQPTSNAFKVIDKQINQLVTDELTLEQLPTAQWTLH 496
Query: 409 EWELYLENLPKSAEASQVLALDERYRLSESKDYEVKVAFLQLAISSSCKDYYGEVEKTLK 468
EW ++ NLP + +++ LD+ + L+ S + E+ A+ L++ + K+ Y + K LK
Sbjct: 497 EWLHFINNLPVDLDHQRMVNLDKAFDLTNSSNAEIAHAWYLLSVRADYKEVYPAMAKYLK 556
Query: 469 EVGRMKYLRPLYIALVQGAGKDEEKILAKRVFAEARDSYHPIAQGVVESIF 519
+GR K + PLY L + A E K A V+ +AR YH +AQG V+ +
Sbjct: 557 SIGRRKLIVPLYKELAKNA---ESKAWAVEVYKQARPGYHGLAQGTVDGVL 604
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 110/239 (46%), Gaps = 30/239 (12%)
Query: 5 DPHSFTESTHPLTTHISLSLYFDFSSSTIHAAAILTLA--SPHAGPLSLDTRSLTIHQVX 62
D +++ TH+ L L DF ++ A L+L + + PL LDTR L IH+V
Sbjct: 16 DAYTYANYDQVKATHVYLDLNVDFDKKSLSGFAELSLDWFTDNKAPLILDTRDLVIHRVM 75
Query: 63 XXXXX---XXXXXXXXXXXXXIKGRHLIVTLSDHSSVLIVFSTSPSSSALQWLSPPQTFN 119
+ + I T + V + ++++ ++ LQWLS QT
Sbjct: 76 AKNSQGQWVKVNYDLAKRDDVLGSKLTINTPLNAKKVRVYYNSTEKATGLQWLSAEQTAG 135
Query: 120 KLHPFVYTQCQAIHARSVFPCQDTPAARVRYKALINIPRQLSAVMAARHEDRRPPVAGET 179
K PF+++Q QAIHARS P QDTP+ RV Y A I + L AVM+A +E P +
Sbjct: 136 KEKPFLFSQNQAIHARSWIPIQDTPSVRVTYTARITTDKDLLAVMSANNE---PGTERDG 192
Query: 180 KAFGSSCFDFDYESLWCADGRVVEEFEMNQPVPPYLFAFAVGELGFREVGPRTRVYAES 238
F F M Q +PPYL A VG+L F+ + +T +YAES
Sbjct: 193 DYF----------------------FSMPQAIPPYLIAIGVGDLEFKAMSHQTGIYAES 229
>pdb|1SQM|A Chain A, Structure Of [r563a] Leukotriene A4 Hydrolase
Length = 610
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 116/229 (50%), Gaps = 31/229 (13%)
Query: 17 TTHISLSLYFDFSSSTIHAAAILTLASPHAG--PLSLDTRSLTIHQVXXXXXXXXXXXXX 74
T H+ L DF+ T+ A LT+ S L LDT+ LTI +V
Sbjct: 18 TKHLHLRCSVDFTRRTLTGTAALTVQSQEDNLRSLVLDTKDLTIEKVVINGQEVKYALGE 77
Query: 75 XXXXXXIKGR----HLIVTLSDHSSVLI--VFSTSPSSSALQWLSPPQTFNKLHPFVYTQ 128
KG L + LS + ++I F TSP SSALQWL+P QT K HP++++Q
Sbjct: 78 RQSY---KGSPMEISLPIALSKNQEIVIEISFETSPKSSALQWLTPEQTSGKEHPYLFSQ 134
Query: 129 CQAIHARSVFPCQDTPAARVRYKALINIPRQLSAVMAARHEDRRPPVAGETKAFGSSCFD 188
CQAIH R++ PCQDTP+ ++ Y A +++P++L A+M+A + P
Sbjct: 135 CQAIHCRAILPCQDTPSVKLTYTAEVSVPKELVALMSAIRDGETP--------------- 179
Query: 189 FDYESLWCADGRVVEEFEMNQPVPPYLFAFAVGELGFREVGPRTRVYAE 237
D E R + +F P+P YL A VG L R++GPRT V++E
Sbjct: 180 -DPED----PSRKIYKFIQKVPIPCYLIALVVGALESRQIGPRTLVWSE 223
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 134/296 (45%), Gaps = 22/296 (7%)
Query: 235 YAESGFTTYAERRIVEVVQGEDRAVLNIGIGWRGLNEEMERFKDNLECTKLKTNQEGLDP 294
+ G T Y ER I + GE N GW L ++ F + TKL + +DP
Sbjct: 315 WLNEGHTVYLERHICGRLFGEKFRHFNALGGWGELQNSVKTFGETHPFTKLVVDLTDIDP 374
Query: 295 DDVYSQVPYEKGFQFLWRIERQIGRP-AFDEFIKKYIATFKFKSIDTETFLNFL----KE 349
D YS VPYEKGF L+ +E+ +G P F F+K Y+ F +KSI T+ + +FL K+
Sbjct: 375 DVAYSSVPYEKGFALLFYLEQLLGGPEIFLGFLKAYVEKFSYKSITTDDWKDFLYSYFKD 434
Query: 350 NVPGIEKQIDLELWTEGTGIPPDAYEPVSSLYSKIVSLANEFKLGKIPKEDEVADWQGQE 409
V + Q+D W G+PP +L + ++L+ + KED++ + +
Sbjct: 435 KV-DVLNQVDWNAWLYSPGLPPIKPNYDMTLTNACIALSQRWITA---KEDDLNSFNATD 490
Query: 410 W---------ELYLENLPKSA-EASQVLALDERYRLSESKDYEVKVAFLQLAISSSCKDY 459
E + L ++ + + E Y + + E++ +L+L I S +D
Sbjct: 491 LKDLSSHQLNEFLAQTLQRAPLPLGHIKRMQEVYNFNAINNSEIRFRWLRLCIQSKWEDA 550
Query: 460 YGEVEKTLKEVGRMKYLRPLYIALVQGAGKDEEKILAKRVFAEARDSYHPIAQGVV 515
K E G MK+ RPL+ L A D+ A R + E + S HP+ +V
Sbjct: 551 IPLALKMATEQGAMKFTRPLFKDL---AAFDKSHDQAVRTYQEHKASMHPVTAMLV 603
>pdb|1GW6|A Chain A, Structure Of Leukotriene A4 Hydrolase D375n Mutant
Length = 610
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 116/229 (50%), Gaps = 31/229 (13%)
Query: 17 TTHISLSLYFDFSSSTIHAAAILTLASPHAG--PLSLDTRSLTIHQVXXXXXXXXXXXXX 74
T H+ L DF+ T+ A LT+ S L LDT+ LTI +V
Sbjct: 18 TKHLHLRCSVDFTRRTLTGTAALTVQSQEDNLRSLVLDTKDLTIEKVVINGQEVKYALGE 77
Query: 75 XXXXXXIKGR----HLIVTLSDHSSVLI--VFSTSPSSSALQWLSPPQTFNKLHPFVYTQ 128
KG L + LS + ++I F TSP SSALQWL+P QT K HP++++Q
Sbjct: 78 RQSY---KGSPMEISLPIALSKNQEIVIEISFETSPKSSALQWLTPEQTSGKEHPYLFSQ 134
Query: 129 CQAIHARSVFPCQDTPAARVRYKALINIPRQLSAVMAARHEDRRPPVAGETKAFGSSCFD 188
CQAIH R++ PCQDTP+ ++ Y A +++P++L A+M+A + P
Sbjct: 135 CQAIHCRAILPCQDTPSVKLTYTAEVSVPKELVALMSAIRDGETP--------------- 179
Query: 189 FDYESLWCADGRVVEEFEMNQPVPPYLFAFAVGELGFREVGPRTRVYAE 237
D E R + +F P+P YL A VG L R++GPRT V++E
Sbjct: 180 -DPED----PSRKIYKFIQKVPIPCYLIALVVGALESRQIGPRTLVWSE 223
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 135/296 (45%), Gaps = 22/296 (7%)
Query: 235 YAESGFTTYAERRIVEVVQGEDRAVLNIGIGWRGLNEEMERFKDNLECTKLKTNQEGLDP 294
+ G T Y ER I + GE N GW L ++ F + TKL + +DP
Sbjct: 315 WLNEGHTVYLERHICGRLFGEKFRHFNALGGWGELQNSVKTFGETHPFTKLVVDLTDIDP 374
Query: 295 DDVYSQVPYEKGFQFLWRIERQIGRP-AFDEFIKKYIATFKFKSIDTETFLNFL----KE 349
+ YS VPYEKGF L+ +E+ +G P F F+K Y+ F +KSI T+ + +FL K+
Sbjct: 375 NVAYSSVPYEKGFALLFYLEQLLGGPEIFLGFLKAYVEKFSYKSITTDDWKDFLYSYFKD 434
Query: 350 NVPGIEKQIDLELWTEGTGIPPDAYEPVSSLYSKIVSLANEFKLGKIPKEDEVADWQGQE 409
V + Q+D W G+PP +L + ++L+ + KED++ + +
Sbjct: 435 KV-DVLNQVDWNAWLYSPGLPPIKPNYDMTLTNACIALSQRWITA---KEDDLNSFNATD 490
Query: 410 W---------ELYLENLPKSA-EASQVLALDERYRLSESKDYEVKVAFLQLAISSSCKDY 459
E + L ++ + + E Y + + E++ +L+L I S +D
Sbjct: 491 LKDLSSHQLNEFLAQTLQRAPLPLGHIKRMQEVYNFNAINNSEIRFRWLRLCIQSKWEDA 550
Query: 460 YGEVEKTLKEVGRMKYLRPLYIALVQGAGKDEEKILAKRVFAEARDSYHPIAQGVV 515
K E GRMK+ RPL+ L A D+ A R + E + S HP+ +V
Sbjct: 551 IPLALKMATEQGRMKFTRPLFKDL---AAFDKSHDQAVRTYQEHKASMHPVTAMLV 603
>pdb|1HS6|A Chain A, Structure Of Leukotriene A4 Hydrolase Complexed With
Bestatin.
pdb|2VJ8|A Chain A, Complex Of Human Leukotriene A4 Hydrolase With A
Hydroxamic Acid Inhibitor
pdb|3FTS|A Chain A, Leukotriene A4 Hydrolase In Complex With Resveratrol
pdb|3FTU|A Chain A, Leukotriene A4 Hydrolase In Complex With
Dihydroresveratrol
pdb|3FTV|A Chain A, Leukotriene A4 Hydrolase In Complex With Fragment N-
(Pyridin-3-Ylmethyl)aniline
pdb|3FTW|A Chain A, Leukotriene A4 Hydrolase In Complex With Fragments N-
(Pyridin-3-Ylmethyl)aniline And Acetate
pdb|3FTX|A Chain A, Leukotriene A4 Hydrolase In Complex With
Dihydroresveratrol And Bestatin
pdb|3FTY|A Chain A, Leukotriene A4 Hydrolase In Complex With Fragment 3-
(Benzyloxy)pyridin-2-Amine
pdb|3FU0|A Chain A, Leukotriene A4 Hydrolase In Complex With Fragment 4-(4-
Fluorobenzoyl)pyridine
pdb|3FU3|A Chain A, Leukotriene A4 Hydrolase In Complex With Fragment 4-(2-
Amino-1,3-Thiazol-4-Yl)phenol
pdb|3FU5|A Chain A, Leukotriene A4 Hydrolase In Complex With (5-Thiophen-2-
Ylthiophen-2-Yl)methylamine
pdb|3FU6|A Chain A, Leukotriene A4 Hydrolase In Complex With Fragment (4-
Thiophen-2-Ylphenyl)methanamine
pdb|3FUD|A Chain A, Leukotriene A4 Hydrolase In Complex With N-Methyl-1-(2-
Thiophen-2-Ylphenyl)methanamine
pdb|3FUE|A Chain A, Leukotriene A4 Hydrolase In Complex With Fragment 5-
Chloroindole And Bestatin
pdb|3FUF|A Chain A, Leukotriene A4 Hydrolase In Complex With Fragment 5-
Fluoroindole And Bestatin
pdb|3FUH|A Chain A, Leukotriene A4 Hydrolase In Complex With Fragment 5-
Hydroxyindole And Bestatin
pdb|3FUI|A Chain A, Leukotriene A4 Hydrolase In Complex With N-Benzyl-4-[(2r)-
Pyrrolidin-2-Ylmethoxy]aniline
pdb|3FUJ|A Chain A, Leukotriene A4 Hydrolase In Complex With
5-[2-(1h-Pyrrol-1- Yl)ethoxy]-1h-Indole
pdb|3FUK|A Chain A, Leukotriene A4 Hydrolase In Complex With 1-[2-(1h-Indol-5-
Yloxy)ethyl]piperidine-4-Carboxylic Acid
pdb|3FUM|A Chain A, Leukotriene A4 Hydrolase In Complex With
(R)-Pyridin-4-Yl[4-
(2-Pyrrolidin-1-Ylethoxy)phenyl]methanol
pdb|3FUN|A Chain A, Leukotriene A4 Hydrolase In Complex With {4-[(2r)-
Pyrrolidin-2-Ylmethoxy]phenyl}(4-Thiophen-3-Ylphenyl)
Methanone
pdb|3FH5|A Chain A, Leukotriene A4 Hydrolase Complexed With Inhibitor
(2r)-2-[(4- Benzylphenoxy)methyl]pyrrolidine.
pdb|3FH7|A Chain A, Leukotriene A4 Hydrolase Complexed With Inhibitor
4-[(2s)-2-{[4-(4-
Chlorophenoxy)phenoxy]methyl}pyrrolidin-1-Yl]butanoate.
pdb|3FH8|A Chain A, Leukotriene A4 Hydrolase Complexed With Inhibitor 1-[2-(4-
Benzylphenoxy)ethyl]pyrrolidine.
pdb|3FHE|A Chain A, Leukotriene A4 Hydrolase Complexed With Inhibitor N-[3-(4-
Benzylphenoxy)propyl]-N-Methyl-Beta-Alanine.
pdb|3FTZ|A Chain A, Leukotriene A4 Hydrolase In Complex With Fragment
2-(pyridin-3- Ylmethoxy)aniline
pdb|3FUL|A Chain A, Leukotriene A4 Hydrolase In Complex With
Pyridin-4-Yl[4-(2-Pyrrolidin-
1-Ylethoxy)phenyl]methanone
pdb|4DPR|A Chain A, Structure Of Human Leukotriene A4 Hydrolase In Complex
With Inhibitor Captopril
Length = 611
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 116/229 (50%), Gaps = 31/229 (13%)
Query: 17 TTHISLSLYFDFSSSTIHAAAILTLASPHAG--PLSLDTRSLTIHQVXXXXXXXXXXXXX 74
T H+ L DF+ T+ A LT+ S L LDT+ LTI +V
Sbjct: 19 TKHLHLRCSVDFTRRTLTGTAALTVQSQEDNLRSLVLDTKDLTIEKVVINGQEVKYALGE 78
Query: 75 XXXXXXIKGR----HLIVTLSDHSSVLI--VFSTSPSSSALQWLSPPQTFNKLHPFVYTQ 128
KG L + LS + ++I F TSP SSALQWL+P QT K HP++++Q
Sbjct: 79 RQSY---KGSPMEISLPIALSKNQEIVIEISFETSPKSSALQWLTPEQTSGKEHPYLFSQ 135
Query: 129 CQAIHARSVFPCQDTPAARVRYKALINIPRQLSAVMAARHEDRRPPVAGETKAFGSSCFD 188
CQAIH R++ PCQDTP+ ++ Y A +++P++L A+M+A + P
Sbjct: 136 CQAIHCRAILPCQDTPSVKLTYTAEVSVPKELVALMSAIRDGETP--------------- 180
Query: 189 FDYESLWCADGRVVEEFEMNQPVPPYLFAFAVGELGFREVGPRTRVYAE 237
D E R + +F P+P YL A VG L R++GPRT V++E
Sbjct: 181 -DPED----PSRKIYKFIQKVPIPCYLIALVVGALESRQIGPRTLVWSE 224
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 135/296 (45%), Gaps = 22/296 (7%)
Query: 235 YAESGFTTYAERRIVEVVQGEDRAVLNIGIGWRGLNEEMERFKDNLECTKLKTNQEGLDP 294
+ G T Y ER I + GE N GW L ++ F + TKL + +DP
Sbjct: 316 WLNEGHTVYLERHICGRLFGEKFRHFNALGGWGELQNSVKTFGETHPFTKLVVDLTDIDP 375
Query: 295 DDVYSQVPYEKGFQFLWRIERQIGRP-AFDEFIKKYIATFKFKSIDTETFLNFL----KE 349
D YS VPYEKGF L+ +E+ +G P F F+K Y+ F +KSI T+ + +FL K+
Sbjct: 376 DVAYSSVPYEKGFALLFYLEQLLGGPEIFLGFLKAYVEKFSYKSITTDDWKDFLYSYFKD 435
Query: 350 NVPGIEKQIDLELWTEGTGIPPDAYEPVSSLYSKIVSLANEFKLGKIPKEDEVADWQGQE 409
V + Q+D W G+PP +L + ++L+ + KED++ + +
Sbjct: 436 KV-DVLNQVDWNAWLYSPGLPPIKPNYDMTLTNACIALSQRWITA---KEDDLNSFNATD 491
Query: 410 W---------ELYLENLPKSA-EASQVLALDERYRLSESKDYEVKVAFLQLAISSSCKDY 459
E + L ++ + + E Y + + E++ +L+L I S +D
Sbjct: 492 LKDLSSHQLNEFLAQTLQRAPLPLGHIKRMQEVYNFNAINNSEIRFRWLRLCIQSKWEDA 551
Query: 460 YGEVEKTLKEVGRMKYLRPLYIALVQGAGKDEEKILAKRVFAEARDSYHPIAQGVV 515
K E GRMK+ RPL+ L A D+ A R + E + S HP+ +V
Sbjct: 552 IPLALKMATEQGRMKFTRPLFKDL---AAFDKSHDQAVRTYQEHKASMHPVTAMLV 604
>pdb|1H19|A Chain A, Structure Of [e271q] Leukotriene A4 Hydrolase
Length = 611
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 116/229 (50%), Gaps = 31/229 (13%)
Query: 17 TTHISLSLYFDFSSSTIHAAAILTLASPHAG--PLSLDTRSLTIHQVXXXXXXXXXXXXX 74
T H+ L DF+ T+ A LT+ S L LDT+ LTI +V
Sbjct: 19 TKHLHLRCSVDFTRRTLTGTAALTVQSQEDNLRSLVLDTKDLTIEKVVINGQEVKYALGE 78
Query: 75 XXXXXXIKGR----HLIVTLSDHSSVLI--VFSTSPSSSALQWLSPPQTFNKLHPFVYTQ 128
KG L + LS + ++I F TSP SSALQWL+P QT K HP++++Q
Sbjct: 79 RQSY---KGSPMEISLPIALSKNQEIVIEISFETSPKSSALQWLTPEQTSGKEHPYLFSQ 135
Query: 129 CQAIHARSVFPCQDTPAARVRYKALINIPRQLSAVMAARHEDRRPPVAGETKAFGSSCFD 188
CQAIH R++ PCQDTP+ ++ Y A +++P++L A+M+A + P
Sbjct: 136 CQAIHCRAILPCQDTPSVKLTYTAEVSVPKELVALMSAIRDGETP--------------- 180
Query: 189 FDYESLWCADGRVVEEFEMNQPVPPYLFAFAVGELGFREVGPRTRVYAE 237
D E R + +F P+P YL A VG L R++GPRT V++E
Sbjct: 181 -DPED----PSRKIYKFIQKVPIPCYLIALVVGALESRQIGPRTLVWSE 224
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 135/296 (45%), Gaps = 22/296 (7%)
Query: 235 YAESGFTTYAERRIVEVVQGEDRAVLNIGIGWRGLNEEMERFKDNLECTKLKTNQEGLDP 294
+ G T Y ER I + GE N GW L ++ F + TKL + +DP
Sbjct: 316 WLNEGHTVYLERHICGRLFGEKFRHFNALGGWGELQNSVKTFGETHPFTKLVVDLTDIDP 375
Query: 295 DDVYSQVPYEKGFQFLWRIERQIGRP-AFDEFIKKYIATFKFKSIDTETFLNFL----KE 349
D YS VPYEKGF L+ +E+ +G P F F+K Y+ F +KSI T+ + +FL K+
Sbjct: 376 DVAYSSVPYEKGFALLFYLEQLLGGPEIFLGFLKAYVEKFSYKSITTDDWKDFLYSYFKD 435
Query: 350 NVPGIEKQIDLELWTEGTGIPPDAYEPVSSLYSKIVSLANEFKLGKIPKEDEVADWQGQE 409
V + Q+D W G+PP +L + ++L+ + KED++ + +
Sbjct: 436 KV-DVLNQVDWNAWLYSPGLPPIKPNYDMTLTNACIALSQRWITA---KEDDLNSFNATD 491
Query: 410 W---------ELYLENLPKSA-EASQVLALDERYRLSESKDYEVKVAFLQLAISSSCKDY 459
E + L ++ + + E Y + + E++ +L+L I S +D
Sbjct: 492 LKDLSSHQLNEFLAQTLQRAPLPLGHIKRMQEVYNFNAINNSEIRFRWLRLCIQSKWEDA 551
Query: 460 YGEVEKTLKEVGRMKYLRPLYIALVQGAGKDEEKILAKRVFAEARDSYHPIAQGVV 515
K E GRMK+ RPL+ L A D+ A R + E + S HP+ +V
Sbjct: 552 IPLALKMATEQGRMKFTRPLFKDL---AAFDKSHDQAVRTYQEHKASMHPVTAMLV 604
>pdb|3B7S|A Chain A, [e296q]lta4h In Complex With Rsr Substrate
pdb|3B7T|A Chain A, [e296q]lta4h In Complex With Arg-Ala-Arg Substrate
Length = 616
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 116/229 (50%), Gaps = 31/229 (13%)
Query: 17 TTHISLSLYFDFSSSTIHAAAILTLASPHAG--PLSLDTRSLTIHQVXXXXXXXXXXXXX 74
T H+ L DF+ T+ A LT+ S L LDT+ LTI +V
Sbjct: 24 TKHLHLRCSVDFTRRTLTGTAALTVQSQEDNLRSLVLDTKDLTIEKVVINGQEVKYALGE 83
Query: 75 XXXXXXIKGR----HLIVTLSDHSSVLI--VFSTSPSSSALQWLSPPQTFNKLHPFVYTQ 128
KG L + LS + ++I F TSP SSALQWL+P QT K HP++++Q
Sbjct: 84 RQSY---KGSPMEISLPIALSKNQEIVIEISFETSPKSSALQWLTPEQTSGKEHPYLFSQ 140
Query: 129 CQAIHARSVFPCQDTPAARVRYKALINIPRQLSAVMAARHEDRRPPVAGETKAFGSSCFD 188
CQAIH R++ PCQDTP+ ++ Y A +++P++L A+M+A + P
Sbjct: 141 CQAIHCRAILPCQDTPSVKLTYTAEVSVPKELVALMSAIRDGETP--------------- 185
Query: 189 FDYESLWCADGRVVEEFEMNQPVPPYLFAFAVGELGFREVGPRTRVYAE 237
D E R + +F P+P YL A VG L R++GPRT V++E
Sbjct: 186 -DPED----PSRKIYKFIQKVPIPCYLIALVVGALESRQIGPRTLVWSE 229
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 135/296 (45%), Gaps = 22/296 (7%)
Query: 235 YAESGFTTYAERRIVEVVQGEDRAVLNIGIGWRGLNEEMERFKDNLECTKLKTNQEGLDP 294
+ G T Y ER I + GE N GW L ++ F + TKL + +DP
Sbjct: 321 WLNEGHTVYLERHICGRLFGEKFRHFNALGGWGELQNSVKTFGETHPFTKLVVDLTDIDP 380
Query: 295 DDVYSQVPYEKGFQFLWRIERQIGRP-AFDEFIKKYIATFKFKSIDTETFLNFL----KE 349
D YS VPYEKGF L+ +E+ +G P F F+K Y+ F +KSI T+ + +FL K+
Sbjct: 381 DVAYSSVPYEKGFALLFYLEQLLGGPEIFLGFLKAYVEKFSYKSITTDDWKDFLYSYFKD 440
Query: 350 NVPGIEKQIDLELWTEGTGIPPDAYEPVSSLYSKIVSLANEFKLGKIPKEDEVADWQGQE 409
V + Q+D W G+PP +L + ++L+ + KED++ + +
Sbjct: 441 KV-DVLNQVDWNAWLYSPGLPPIKPNYDMTLTNACIALSQRWITA---KEDDLNSFNATD 496
Query: 410 W---------ELYLENLPKSA-EASQVLALDERYRLSESKDYEVKVAFLQLAISSSCKDY 459
E + L ++ + + E Y + + E++ +L+L I S +D
Sbjct: 497 LKDLSSHQLNEFLAQTLQRAPLPLGHIKRMQEVYNFNAINNSEIRFRWLRLCIQSKWEDA 556
Query: 460 YGEVEKTLKEVGRMKYLRPLYIALVQGAGKDEEKILAKRVFAEARDSYHPIAQGVV 515
K E GRMK+ RPL+ L A D+ A R + E + S HP+ +V
Sbjct: 557 IPLALKMATEQGRMKFTRPLFKDL---AAFDKSHDQAVRTYQEHKASMHPVTAMLV 609
>pdb|3U9W|A Chain A, Structure Of Human Leukotriene A4 Hydrolase In Complex
With Inhibitor Sc57461a
Length = 608
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 116/229 (50%), Gaps = 31/229 (13%)
Query: 17 TTHISLSLYFDFSSSTIHAAAILTLASPHAG--PLSLDTRSLTIHQVXXXXXXXXXXXXX 74
T H+ L DF+ T+ A LT+ S L LDT+ LTI +V
Sbjct: 16 TKHLHLRCSVDFTRRTLTGTAALTVQSQEDNLRSLVLDTKDLTIEKVVINGQEVKYALGE 75
Query: 75 XXXXXXIKGR----HLIVTLSDHSSVLI--VFSTSPSSSALQWLSPPQTFNKLHPFVYTQ 128
KG L + LS + ++I F TSP SSALQWL+P QT K HP++++Q
Sbjct: 76 RQSY---KGSPMEISLPIALSKNQEIVIEISFETSPKSSALQWLTPEQTSGKEHPYLFSQ 132
Query: 129 CQAIHARSVFPCQDTPAARVRYKALINIPRQLSAVMAARHEDRRPPVAGETKAFGSSCFD 188
CQAIH R++ PCQDTP+ ++ Y A +++P++L A+M+A + P
Sbjct: 133 CQAIHCRAILPCQDTPSVKLTYTAEVSVPKELVALMSAIRDGETP--------------- 177
Query: 189 FDYESLWCADGRVVEEFEMNQPVPPYLFAFAVGELGFREVGPRTRVYAE 237
D E R + +F P+P YL A VG L R++GPRT V++E
Sbjct: 178 -DPED----PSRKIYKFIQKVPIPCYLIALVVGALESRQIGPRTLVWSE 221
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 135/296 (45%), Gaps = 22/296 (7%)
Query: 235 YAESGFTTYAERRIVEVVQGEDRAVLNIGIGWRGLNEEMERFKDNLECTKLKTNQEGLDP 294
+ G T Y ER I + GE N GW L ++ F + TKL + +DP
Sbjct: 313 WLNEGHTVYLERHICGRLFGEKFRHFNALGGWGELQNSVKTFGETHPFTKLVVDLTDIDP 372
Query: 295 DDVYSQVPYEKGFQFLWRIERQIGRP-AFDEFIKKYIATFKFKSIDTETFLNFL----KE 349
D YS VPYEKGF L+ +E+ +G P F F+K Y+ F +KSI T+ + +FL K+
Sbjct: 373 DVAYSSVPYEKGFALLFYLEQLLGGPEIFLGFLKAYVEKFSYKSITTDDWKDFLYSYFKD 432
Query: 350 NVPGIEKQIDLELWTEGTGIPPDAYEPVSSLYSKIVSLANEFKLGKIPKEDEVADWQGQE 409
V + Q+D W G+PP +L + ++L+ + KED++ + +
Sbjct: 433 KV-DVLNQVDWNAWLYSPGLPPIKPNYDMTLTNACIALSQRWITA---KEDDLNSFNATD 488
Query: 410 W---------ELYLENLPKSA-EASQVLALDERYRLSESKDYEVKVAFLQLAISSSCKDY 459
E + L ++ + + E Y + + E++ +L+L I S +D
Sbjct: 489 LKDLSSHQLNEFLAQTLQRAPLPLGHIKRMQEVYNFNAINNSEIRFRWLRLCIQSKWEDA 548
Query: 460 YGEVEKTLKEVGRMKYLRPLYIALVQGAGKDEEKILAKRVFAEARDSYHPIAQGVV 515
K E GRMK+ RPL+ L A D+ A R + E + S HP+ +V
Sbjct: 549 IPLALKMATEQGRMKFTRPLFKDL---AAFDKSHDQAVRTYQEHKASMHPVTAMLV 601
>pdb|2R59|A Chain A, Leukotriene A4 Hydrolase Complexed With Inhibitor Rb3041
pdb|3B7R|L Chain L, Leukotriene A4 Hydrolase Complexed With Inhibitor Rb3040
pdb|3B7U|X Chain X, Leukotriene A4 Hydrolase Complexed With Kelatorphan
Length = 616
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 116/229 (50%), Gaps = 31/229 (13%)
Query: 17 TTHISLSLYFDFSSSTIHAAAILTLASPHAG--PLSLDTRSLTIHQVXXXXXXXXXXXXX 74
T H+ L DF+ T+ A LT+ S L LDT+ LTI +V
Sbjct: 24 TKHLHLRCSVDFTRRTLTGTAALTVQSQEDNLRSLVLDTKDLTIEKVVINGQEVKYALGE 83
Query: 75 XXXXXXIKGR----HLIVTLSDHSSVLI--VFSTSPSSSALQWLSPPQTFNKLHPFVYTQ 128
KG L + LS + ++I F TSP SSALQWL+P QT K HP++++Q
Sbjct: 84 RQSY---KGSPMEISLPIALSKNQEIVIEISFETSPKSSALQWLTPEQTSGKEHPYLFSQ 140
Query: 129 CQAIHARSVFPCQDTPAARVRYKALINIPRQLSAVMAARHEDRRPPVAGETKAFGSSCFD 188
CQAIH R++ PCQDTP+ ++ Y A +++P++L A+M+A + P
Sbjct: 141 CQAIHCRAILPCQDTPSVKLTYTAEVSVPKELVALMSAIRDGETP--------------- 185
Query: 189 FDYESLWCADGRVVEEFEMNQPVPPYLFAFAVGELGFREVGPRTRVYAE 237
D E R + +F P+P YL A VG L R++GPRT V++E
Sbjct: 186 -DPED----PSRKIYKFIQKVPIPCYLIALVVGALESRQIGPRTLVWSE 229
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 135/296 (45%), Gaps = 22/296 (7%)
Query: 235 YAESGFTTYAERRIVEVVQGEDRAVLNIGIGWRGLNEEMERFKDNLECTKLKTNQEGLDP 294
+ G T Y ER I + GE N GW L ++ F + TKL + +DP
Sbjct: 321 WLNEGHTVYLERHICGRLFGEKFRHFNALGGWGELQNSVKTFGETHPFTKLVVDLTDIDP 380
Query: 295 DDVYSQVPYEKGFQFLWRIERQIGRP-AFDEFIKKYIATFKFKSIDTETFLNFL----KE 349
D YS VPYEKGF L+ +E+ +G P F F+K Y+ F +KSI T+ + +FL K+
Sbjct: 381 DVAYSSVPYEKGFALLFYLEQLLGGPEIFLGFLKAYVEKFSYKSITTDDWKDFLYSYFKD 440
Query: 350 NVPGIEKQIDLELWTEGTGIPPDAYEPVSSLYSKIVSLANEFKLGKIPKEDEVADWQGQE 409
V + Q+D W G+PP +L + ++L+ + KED++ + +
Sbjct: 441 KV-DVLNQVDWNAWLYSPGLPPIKPNYDMTLTNACIALSQRWITA---KEDDLNSFNATD 496
Query: 410 W---------ELYLENLPKSA-EASQVLALDERYRLSESKDYEVKVAFLQLAISSSCKDY 459
E + L ++ + + E Y + + E++ +L+L I S +D
Sbjct: 497 LKDLSSHQLNEFLAQTLQRAPLPLGHIKRMQEVYNFNAINNSEIRFRWLRLCIQSKWEDA 556
Query: 460 YGEVEKTLKEVGRMKYLRPLYIALVQGAGKDEEKILAKRVFAEARDSYHPIAQGVV 515
K E GRMK+ RPL+ L A D+ A R + E + S HP+ +V
Sbjct: 557 IPLALKMATEQGRMKFTRPLFKDL---AAFDKSHDQAVRTYQEHKASMHPVTAMLV 609
>pdb|3CHO|A Chain A, Crystal Structure Of Leukotriene A4 Hydrolase In Complex
With 2-Amino-N-[4-(Phenylmethoxy)phenyl]-Acetamide
pdb|3CHP|A Chain A, Crystal Structure Of Leukotriene A4 Hydrolase In Complex
With (3s)-3-Amino-4-Oxo-4-[(4-Phenylmethoxyphenyl)
Amino]butanoic Acid
pdb|3CHQ|A Chain A, Crystal Structure Of Leukotriene A4 Hydrolase In Complex
With N5-[4-(Phenylmethoxy)phenyl]-L-Glutamine
pdb|3CHR|A Chain A, Crystal Structure Of Leukotriene A4 Hydrolase In Complex
With 4-Amino-N-[4-(Phenylmethoxy)phenyl]-Butanamide
pdb|3CHS|A Chain A, Crystal Structure Of Leukotriene A4 Hydrolase In Complex
With (2s)-2-Amino-5-[[4-[(2s)-2-Hydroxy-2-Phenyl-
Ethoxy]phenyl]amino]-5-Oxo-Pentanoic Acid
Length = 610
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 116/229 (50%), Gaps = 31/229 (13%)
Query: 17 TTHISLSLYFDFSSSTIHAAAILTLASPHAG--PLSLDTRSLTIHQVXXXXXXXXXXXXX 74
T H+ L DF+ T+ A LT+ S L LDT+ LTI +V
Sbjct: 18 TKHLHLRCSVDFTRRTLTGTAALTVQSQEDNLRSLVLDTKDLTIEKVVINGQEVKYALGE 77
Query: 75 XXXXXXIKGR----HLIVTLSDHSSVLI--VFSTSPSSSALQWLSPPQTFNKLHPFVYTQ 128
KG L + LS + ++I F TSP SSALQWL+P QT K HP++++Q
Sbjct: 78 RQSY---KGSPMEISLPIALSKNQEIVIEISFETSPKSSALQWLTPEQTSGKEHPYLFSQ 134
Query: 129 CQAIHARSVFPCQDTPAARVRYKALINIPRQLSAVMAARHEDRRPPVAGETKAFGSSCFD 188
CQAIH R++ PCQDTP+ ++ Y A +++P++L A+M+A + P
Sbjct: 135 CQAIHCRAILPCQDTPSVKLTYTAEVSVPKELVALMSAIRDGETP--------------- 179
Query: 189 FDYESLWCADGRVVEEFEMNQPVPPYLFAFAVGELGFREVGPRTRVYAE 237
D E R + +F P+P YL A VG L R++GPRT V++E
Sbjct: 180 -DPED----PSRKIYKFIQKVPIPCYLIALVVGALESRQIGPRTLVWSE 223
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 135/296 (45%), Gaps = 22/296 (7%)
Query: 235 YAESGFTTYAERRIVEVVQGEDRAVLNIGIGWRGLNEEMERFKDNLECTKLKTNQEGLDP 294
+ G T Y ER I + GE N GW L ++ F + TKL + +DP
Sbjct: 315 WLNEGHTVYLERHICGRLFGEKFRHFNALGGWGELQNSVKTFGETHPFTKLVVDLTDIDP 374
Query: 295 DDVYSQVPYEKGFQFLWRIERQIGRP-AFDEFIKKYIATFKFKSIDTETFLNFL----KE 349
D YS VPYEKGF L+ +E+ +G P F F+K Y+ F +KSI T+ + +FL K+
Sbjct: 375 DVAYSSVPYEKGFALLFYLEQLLGGPEIFLGFLKAYVEKFSYKSITTDDWKDFLYSYFKD 434
Query: 350 NVPGIEKQIDLELWTEGTGIPPDAYEPVSSLYSKIVSLANEFKLGKIPKEDEVADWQGQE 409
V + Q+D W G+PP +L + ++L+ + KED++ + +
Sbjct: 435 KV-DVLNQVDWNAWLYSPGLPPIKPNYDMTLTNACIALSQRWITA---KEDDLNSFNATD 490
Query: 410 W---------ELYLENLPKSA-EASQVLALDERYRLSESKDYEVKVAFLQLAISSSCKDY 459
E + L ++ + + E Y + + E++ +L+L I S +D
Sbjct: 491 LKDLSSHQLNEFLAQTLQRAPLPLGHIKRMQEVYNFNAINNSEIRFRWLRLCIQSKWEDA 550
Query: 460 YGEVEKTLKEVGRMKYLRPLYIALVQGAGKDEEKILAKRVFAEARDSYHPIAQGVV 515
K E GRMK+ RPL+ L A D+ A R + E + S HP+ +V
Sbjct: 551 IPLALKMATEQGRMKFTRPLFKDL---AAFDKSHDQAVRTYQEHKASMHPVTAMLV 603
>pdb|2XQ0|A Chain A, Structure Of Yeast Lta4 Hydrolase In Complex With Bestatin
Length = 632
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 145/312 (46%), Gaps = 35/312 (11%)
Query: 235 YAESGFTTYAERRIVEVVQGEDRAVLNIGIGWRGLNEEMERFKDNLECTKLKTN-QEGLD 293
+ G+T Y ERRI+ + GE + IGW L ++ KD + L N + D
Sbjct: 321 WLNEGWTVYLERRIIGAIHGEPTRHFSALIGWSDLQNSIDSMKDPERFSTLVQNLNDNTD 380
Query: 294 PDDVYSQVPYEKGFQFLWRIERQIGRPA-FDEFIKKYIATFKFKSIDTETFLNFLKENVP 352
PDD +S VPYEKGF L+ +E +G A FD FI+ Y F KS+DT FL+ L E P
Sbjct: 381 PDDAFSTVPYEKGFNLLFHLETILGGKAEFDPFIRHYFKKFAKKSLDTFQFLDTLYEFYP 440
Query: 353 ---GIEKQIDLELWTEGTGIPPDAY------EPVSSLYSKIVSLANEFKLGKIPKED--- 400
I +D E W G+PP + + V L K V +A K + + +
Sbjct: 441 EKKEILDSVDWETWLYKPGMPPRPHFITALADNVYQLADKWVEMAQHLKTTEDFRSEFNA 500
Query: 401 -EVADWQGQEWELYLENLPKSAE---------------ASQVLALDERYRLSESKDYEVK 444
++ D+ + L+LE L ++ AS+ L + + +S++ EV
Sbjct: 501 IDIKDFNSNQLVLFLETLTQNGHSNKKPKDFDWAKFPVASRALLDIYQDNIVKSQNAEVV 560
Query: 445 VAFLQLAISSSCKDYYGEVEKTLKEVGRMKYLRPLYIALVQGAGKDEEKILAKRVFAEAR 504
+ I + ++ Y + L VGRMK++RP Y L ++ LA F + +
Sbjct: 561 FKMFKFQIFAKLQEEYKHLADWLGTVGRMKFVRPGYRLL-----NSVDRRLALATFDKFK 615
Query: 505 DSYHPIAQGVVE 516
D+YHPI + +V+
Sbjct: 616 DTYHPICKALVK 627
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 97/228 (42%), Gaps = 40/228 (17%)
Query: 19 HISLSLYFDFSSSTIHAAAILTLASPHAGP-----LSLDTRSLTIHQVXXXXXXXXXXXX 73
H L+L F S I + L H G L LDT L + +V
Sbjct: 32 HTDLNLSVSFEKSAISGSVTFQLKKLHEGKNKSDELHLDTSYLDVQEVHIDGSKADFQIE 91
Query: 74 XXXXXXXIKGRHLIV---TLSDHSSVLIVFSTSPSSSALQWLSPPQTFNKLHPFVYTQCQ 130
G L++ + +D+ ++ I F T+ +ALQWL+ QT P+V++Q +
Sbjct: 92 QRKEPL---GSRLVINNASCNDNFTLNIQFRTTDKCTALQWLNSKQT-KGGKPYVFSQLE 147
Query: 131 AIHARSVFPCQDTPAARVRYKALINIPRQLSAVMAA-RHEDRRPPVAGETKAFGSSCFDF 189
AIHARS+FPC DTP+ + + A I P L V + R ED + +T +
Sbjct: 148 AIHARSLFPCFDTPSVKSTFTASIESP--LPVVFSGIRIED----TSKDTNIY------- 194
Query: 190 DYESLWCADGRVVEEFEMNQPVPPYLFAFAVGELGFREVGPRTRVYAE 237
FE P+P YL A G+L +GPR+ VY E
Sbjct: 195 --------------RFEQKVPIPAYLIGIASGDLSSAPIGPRSTVYTE 228
>pdb|2XPY|A Chain A, Structure Of Native Leukotriene A4 Hydrolase From
Saccharomyces Cerevisiae
pdb|2XPZ|A Chain A, Structure Of Native Yeast Lta4 Hydrolase
Length = 632
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 145/312 (46%), Gaps = 35/312 (11%)
Query: 235 YAESGFTTYAERRIVEVVQGEDRAVLNIGIGWRGLNEEMERFKDNLECTKLKTN-QEGLD 293
+ G+T Y ERRI+ + GE + IGW L ++ KD + L N + D
Sbjct: 321 WLNEGWTVYLERRIIGAIHGEPTRHFSALIGWSDLQNSIDSMKDPERFSTLVQNLNDNTD 380
Query: 294 PDDVYSQVPYEKGFQFLWRIERQIGRPA-FDEFIKKYIATFKFKSIDTETFLNFLKENVP 352
PDD +S VPYEKGF L+ +E +G A FD FI+ Y F KS+DT FL+ L E P
Sbjct: 381 PDDAFSTVPYEKGFNLLFHLETILGGKAEFDPFIRHYFKKFAKKSLDTFQFLDTLYEFYP 440
Query: 353 ---GIEKQIDLELWTEGTGIPPDAY------EPVSSLYSKIVSLANEFKLGKIPKED--- 400
I +D E W G+PP + + V L K V +A K + + +
Sbjct: 441 EKKEILDSVDWETWLYKPGMPPRPHFITALADNVYQLADKWVEMAQHLKTTEDFRSEFNA 500
Query: 401 -EVADWQGQEWELYLENLPKSAE---------------ASQVLALDERYRLSESKDYEVK 444
++ D+ + L+LE L ++ AS+ L + + +S++ EV
Sbjct: 501 IDIKDFNSNQLVLFLETLTQNGHSNKKPKDFDWAKFPVASRALLDIYQDNIVKSQNAEVV 560
Query: 445 VAFLQLAISSSCKDYYGEVEKTLKEVGRMKYLRPLYIALVQGAGKDEEKILAKRVFAEAR 504
+ I + ++ Y + L VGRMK++RP Y L ++ LA F + +
Sbjct: 561 FKMFKFQIFAKLQEEYKHLADWLGTVGRMKFVRPGYRLL-----NSVDRRLALATFDKFK 615
Query: 505 DSYHPIAQGVVE 516
D+YHPI + +V+
Sbjct: 616 DTYHPICKALVK 627
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 97/228 (42%), Gaps = 40/228 (17%)
Query: 19 HISLSLYFDFSSSTIHAAAILTLASPHAGP-----LSLDTRSLTIHQVXXXXXXXXXXXX 73
H L+L F S I + L H G L LDT L + +V
Sbjct: 32 HTDLNLSVSFEKSAISGSVTFQLKKLHEGKNKSDELHLDTSYLDVQEVHIDGSKADFQIE 91
Query: 74 XXXXXXXIKGRHLIV---TLSDHSSVLIVFSTSPSSSALQWLSPPQTFNKLHPFVYTQCQ 130
G L++ + +D+ ++ I F T+ +ALQWL+ QT P+V++Q +
Sbjct: 92 QRKEPL---GSRLVINNASCNDNFTLNIQFRTTDKCTALQWLNSKQT-KGGKPYVFSQLE 147
Query: 131 AIHARSVFPCQDTPAARVRYKALINIPRQLSAVMAA-RHEDRRPPVAGETKAFGSSCFDF 189
AIHARS+FPC DTP+ + + A I P L V + R ED + +T +
Sbjct: 148 AIHARSLFPCFDTPSVKSTFTASIESP--LPVVFSGIRIED----TSKDTNIY------- 194
Query: 190 DYESLWCADGRVVEEFEMNQPVPPYLFAFAVGELGFREVGPRTRVYAE 237
FE P+P YL A G+L +GPR+ VY E
Sbjct: 195 --------------RFEQKVPIPAYLIGIASGDLSSAPIGPRSTVYTE 228
>pdb|4HOL|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed
With Poly- Alanine
Length = 908
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 51/136 (37%), Gaps = 25/136 (18%)
Query: 127 TQCQAIHARSVFPCQDTPAARVRYKALINIPRQLSAVMAARHEDRRPPVAGETKAFGSSC 186
TQ Q+ AR FPC D PA + + + P L+A+ + P+A +
Sbjct: 143 TQMQSTDARKSFPCFDEPAMKATFNITLIHPNNLTALSNMPPKGSSTPLAEDPN------ 196
Query: 187 FDFDYESLWCADGRVVEEFEMNQPVPPYLFAFAVGELGFREVGPRTRVYAESGFTTYAER 246
W V EFE + YL A+ V E F+ V A++G
Sbjct: 197 --------WS-----VTEFETTPVMSTYLLAYIVSE--FQSVNET----AQNGVLIRIWA 237
Query: 247 RIVEVVQGEDRAVLNI 262
R + +G LN+
Sbjct: 238 RPNAIAEGHGMYALNV 253
>pdb|4FKE|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N
pdb|4FKH|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed
With Alanine
pdb|4FKK|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed
With Bestatin
Length = 909
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 51/136 (37%), Gaps = 25/136 (18%)
Query: 127 TQCQAIHARSVFPCQDTPAARVRYKALINIPRQLSAVMAARHEDRRPPVAGETKAFGSSC 186
TQ Q+ AR FPC D PA + + + P L+A+ + P+A +
Sbjct: 144 TQMQSTDARKSFPCFDEPAMKATFNITLIHPNNLTALSNMPPKGSSTPLAEDPN------ 197
Query: 187 FDFDYESLWCADGRVVEEFEMNQPVPPYLFAFAVGELGFREVGPRTRVYAESGFTTYAER 246
W V EFE + YL A+ V E F+ V A++G
Sbjct: 198 --------WS-----VTEFETTPVMSTYLLAYIVSE--FQSVNET----AQNGVLIRIWA 238
Query: 247 RIVEVVQGEDRAVLNI 262
R + +G LN+
Sbjct: 239 RPNAIAEGHGMYALNV 254
>pdb|4H5H|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed
With Cleaved Poly-Alanine
pdb|4HOM|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed
With Substance P
Length = 908
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 51/136 (37%), Gaps = 25/136 (18%)
Query: 127 TQCQAIHARSVFPCQDTPAARVRYKALINIPRQLSAVMAARHEDRRPPVAGETKAFGSSC 186
TQ Q+ AR FPC D PA + + + P L+A+ + P+A +
Sbjct: 143 TQMQSTDARKSFPCFDEPAMKATFNITLIHPNNLTALSNMPPKGSSTPLAEDPN------ 196
Query: 187 FDFDYESLWCADGRVVEEFEMNQPVPPYLFAFAVGELGFREVGPRTRVYAESGFTTYAER 246
W V EFE + YL A+ V E F+ V A++G
Sbjct: 197 --------WS-----VTEFETTPVMSTYLLAYIVSE--FQSVNET----AQNGVLIRIWA 237
Query: 247 RIVEVVQGEDRAVLNI 262
R + +G LN+
Sbjct: 238 RPNAIAEGHGMYALNV 253
>pdb|4F5C|A Chain A, Crystal Structure Of The Spike Receptor Binding Domain Of
A Porcine Respiratory Coronavirus In Complex With The
Pig Aminopeptidase N Ectodomain
pdb|4F5C|B Chain B, Crystal Structure Of The Spike Receptor Binding Domain Of
A Porcine Respiratory Coronavirus In Complex With The
Pig Aminopeptidase N Ectodomain
Length = 959
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 51/136 (37%), Gaps = 25/136 (18%)
Query: 127 TQCQAIHARSVFPCQDTPAARVRYKALINIPRQLSAVMAARHEDRRPPVAGETKAFGSSC 186
TQ Q+ AR FPC D PA + + + P L+A+ + P+A +
Sbjct: 187 TQMQSTDARKSFPCFDEPAMKATFNITLIHPNNLTALSNMPPKGSSTPLAEDPN------ 240
Query: 187 FDFDYESLWCADGRVVEEFEMNQPVPPYLFAFAVGELGFREVGPRTRVYAESGFTTYAER 246
W V EFE + YL A+ V E F+ V A++G
Sbjct: 241 --------WS-----VTEFETTPVMSTYLLAYIVSE--FQSVNET----AQNGVLIRIWA 281
Query: 247 RIVEVVQGEDRAVLNI 262
R + +G LN+
Sbjct: 282 RPNAIAEGHGMYALNV 297
>pdb|4FYQ|A Chain A, Human Aminopeptidase N (Cd13)
pdb|4FYR|A Chain A, Human Aminopeptidase N (Cd13) In Complex With Bestatin
pdb|4FYS|A Chain A, Human Aminopeptidase N (Cd13) In Complex With Angiotensin
Iv
pdb|4FYT|A Chain A, Human Aminopeptidase N (Cd13) In Complex With Amastatin
Length = 903
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 38/101 (37%), Gaps = 19/101 (18%)
Query: 127 TQCQAIHARSVFPCQDTPAARVRYKALINIPRQLSAVMAARHEDRRPPVAGETKAFGSSC 186
TQ QA AR FPC D PA + + + P+ L+A+ + P+ +
Sbjct: 146 TQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLPEDPN------ 199
Query: 187 FDFDYESLWCADGRVVEEFEMNQPVPPYLFAFAVGELGFRE 227
W V EF + YL AF V E + E
Sbjct: 200 --------WN-----VTEFHTTPKMSTYLLAFIVSEFDYVE 227
>pdb|3Q7J|A Chain A, Engineered Thermoplasma Acidophilum F3 Factor Mimics Human
Aminopeptidase N (Apn) As A Target For Anticancer Drug
Development
pdb|3Q7J|B Chain B, Engineered Thermoplasma Acidophilum F3 Factor Mimics Human
Aminopeptidase N (Apn) As A Target For Anticancer Drug
Development
Length = 780
Score = 32.0 bits (71), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 53/152 (34%), Gaps = 35/152 (23%)
Query: 22 LSLYFDFSSSTIHAAAILTLASPHAGPLSLDTRSLTIHQVXXXXXXXXXXXXXXXXXXXI 81
L+L FD T + +T AG + LD L I+ + +
Sbjct: 8 LTLDFDIQKRTFNGTETIT---ADAGDIVLDAVGLQINWMK------------------V 46
Query: 82 KGRHLIVTLSDHS----------SVLIVFSTSPSSSALQWLSPPQTFNKLHPFVYTQCQA 131
GR T + + I F+ S S LS + + + T QA
Sbjct: 47 NGRDTAFTYDGQTVRAPGDSQPQKIEISFAGKVSDS----LSGIYYAGRENGMITTHFQA 102
Query: 132 IHARSVFPCQDTPAARVRYKALINIPRQLSAV 163
AR +FPC D PA + + + I + A+
Sbjct: 103 TDARRMFPCVDHPAYKAVFAITVVIDKDYDAI 134
>pdb|3HAM|A Chain A, Structure Of The Gentamicin-Aph(2")-Iia Complex
pdb|3HAM|B Chain B, Structure Of The Gentamicin-Aph(2")-Iia Complex
pdb|3HAV|A Chain A, Structure Of The Streptomycin-Atp-Aph(2")-Iia Ternary
Complex
pdb|3HAV|B Chain B, Structure Of The Streptomycin-Atp-Aph(2")-Iia Ternary
Complex
pdb|3HAV|C Chain C, Structure Of The Streptomycin-Atp-Aph(2")-Iia Ternary
Complex
Length = 299
Score = 29.6 bits (65), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 387 LANEFKLGKIPKEDEVADWQGQEWELY--LENLPKSAEASQVLALDERYRL 435
L NE + K+PK D V Q +E+ELY LEN S + V+ +R+ +
Sbjct: 34 LCNEQYVVKVPKRDSVRISQKREFELYRFLENCKLSYQIPAVVYQSDRFNI 84
>pdb|2YD0|A Chain A, Crystal Structure Of The Soluble Domain Of Human
Endoplasmic Reticulum Aminopeptidase 1 Erap1
Length = 897
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 44/115 (38%), Gaps = 28/115 (24%)
Query: 127 TQCQAIHARSVFPCQDTPAARVRYKALINI-PRQLSAVMAARHEDRRPPVAGETKAFGSS 185
TQ + AR FPC D PA + + I PR L+ P V
Sbjct: 135 TQFEPTAARMAFPCFDEPAFKASFSIKIRREPRHLAI-------SNMPLV---------- 177
Query: 186 CFDFDYESLWCADGRVVEEFEMNQPVPPYLFAFAVGEL----GFREVGPRTRVYA 236
+S+ A+G + + F++ + YL AF + + + G + VYA
Sbjct: 178 ------KSVTVAEGLIEDHFDVTVKMSTYLVAFIISDFESVSKITKSGVKVSVYA 226
>pdb|3MDJ|A Chain A, Er Aminopeptidase, Erap1, Bound To The Zinc Aminopeptidase
Inhibitor, Bestatin
pdb|3MDJ|B Chain B, Er Aminopeptidase, Erap1, Bound To The Zinc Aminopeptidase
Inhibitor, Bestatin
pdb|3MDJ|C Chain C, Er Aminopeptidase, Erap1, Bound To The Zinc Aminopeptidase
Inhibitor, Bestatin
Length = 921
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 46/122 (37%), Gaps = 28/122 (22%)
Query: 120 KLHPFVYTQCQAIHARSVFPCQDTPAARVRYKALINI-PRQLSAVMAARHEDRRPPVAGE 178
+L TQ + AR FPC D PA + + I PR L+ P V
Sbjct: 137 ELRILASTQFEPTAARMAFPCFDEPAFKASFSIKIRREPRHLAI-------SNMPLV--- 186
Query: 179 TKAFGSSCFDFDYESLWCADGRVVEEFEMNQPVPPYLFAFAVGEL----GFREVGPRTRV 234
+S+ A+G + + F++ + YL AF + + + G + V
Sbjct: 187 -------------KSVTVAEGLIEDHFDVTVKMSTYLVAFIISDFESVSKITKSGVKVSV 233
Query: 235 YA 236
YA
Sbjct: 234 YA 235
>pdb|3QNF|A Chain A, Crystal Structure Of The Open State Of Human Endoplasmic
Reticulum Aminopeptidase 1 Erap1
pdb|3QNF|B Chain B, Crystal Structure Of The Open State Of Human Endoplasmic
Reticulum Aminopeptidase 1 Erap1
pdb|3QNF|C Chain C, Crystal Structure Of The Open State Of Human Endoplasmic
Reticulum Aminopeptidase 1 Erap1
Length = 954
Score = 29.3 bits (64), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 44/115 (38%), Gaps = 28/115 (24%)
Query: 127 TQCQAIHARSVFPCQDTPAARVRYKALINI-PRQLSAVMAARHEDRRPPVAGETKAFGSS 185
TQ + AR FPC D PA + + I PR L+ P V
Sbjct: 186 TQFEPTAARMAFPCFDEPAFKASFSIKIRREPRHLAI-------SNMPLV---------- 228
Query: 186 CFDFDYESLWCADGRVVEEFEMNQPVPPYLFAFAVGEL----GFREVGPRTRVYA 236
+S+ A+G + + F++ + YL AF + + + G + VYA
Sbjct: 229 ------KSVTVAEGLIEDHFDVTVKMSTYLVAFIISDFESVSKITKSGVKVSVYA 277
>pdb|3UZR|A Chain A, Crystal Structure Of Aminoglycoside Phosphotransferase
Aph(2'')-Ib, Apo Form
pdb|4DCA|A Chain A, Crystal Structure Of Aminoglycoside Phosphotransferase
Aph(2'')-Ib, Adp-Bound
Length = 320
Score = 28.5 bits (62), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 387 LANEFKLGKIPKEDEVADWQGQEWELY--LENLPKSAEASQVLALDERYRL 435
L NE + K+PK D V Q +E ELY LEN S + V+ +R+ +
Sbjct: 55 LCNEQYVVKVPKRDSVRISQKRELELYRFLENCKLSYQIPAVVYQSDRFNI 105
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,133,249
Number of Sequences: 62578
Number of extensions: 621922
Number of successful extensions: 1502
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1401
Number of HSP's gapped (non-prelim): 49
length of query: 524
length of database: 14,973,337
effective HSP length: 103
effective length of query: 421
effective length of database: 8,527,803
effective search space: 3590205063
effective search space used: 3590205063
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)